Query 046394
Match_columns 378
No_of_seqs 512 out of 3589
Neff 10.8
Searched_HMMs 29240
Date Mon Mar 25 20:29:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046394.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046394hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1got_B GT-beta; complex (GTP-b 100.0 1E-35 3.5E-40 266.1 34.3 234 15-249 67-339 (340)
2 1vyh_C Platelet-activating fac 100.0 1.2E-35 4.3E-40 272.3 33.8 233 16-249 121-407 (410)
3 3ow8_A WD repeat-containing pr 100.0 1.2E-34 4.1E-39 256.9 31.7 234 16-250 49-318 (321)
4 3frx_A Guanine nucleotide-bind 100.0 5.4E-34 1.8E-38 252.6 33.3 235 15-250 30-314 (319)
5 2pbi_B Guanine nucleotide-bind 100.0 8.5E-34 2.9E-38 255.0 33.5 234 15-249 76-353 (354)
6 1vyh_C Platelet-activating fac 100.0 2.3E-34 8E-39 263.8 27.4 213 38-251 101-367 (410)
7 3iz6_a 40S ribosomal protein R 100.0 1.8E-34 6.2E-39 261.9 26.3 236 15-251 78-373 (380)
8 2ynn_A Coatomer subunit beta'; 100.0 5E-33 1.7E-37 244.7 33.3 231 16-247 26-297 (304)
9 3ow8_A WD repeat-containing pr 100.0 1.3E-33 4.4E-38 250.3 29.5 214 38-252 25-278 (321)
10 2ynn_A Coatomer subunit beta'; 100.0 3.8E-33 1.3E-37 245.5 31.8 214 37-251 5-257 (304)
11 2xzm_R RACK1; ribosome, transl 100.0 1.5E-32 5.1E-37 245.8 32.7 234 15-250 39-337 (343)
12 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.3E-32 1.1E-36 243.8 31.1 234 15-249 28-331 (345)
13 1got_B GT-beta; complex (GTP-b 100.0 4.8E-32 1.6E-36 242.2 30.2 217 35-252 45-300 (340)
14 4gga_A P55CDC, cell division c 100.0 2.2E-31 7.5E-36 244.9 34.9 231 17-248 117-390 (420)
15 4gqb_B Methylosome protein 50; 100.0 6E-32 2E-36 241.6 30.2 203 16-249 94-327 (344)
16 1nr0_A Actin interacting prote 100.0 7.2E-32 2.5E-36 259.7 32.6 232 18-250 32-352 (611)
17 4ery_A WD repeat-containing pr 100.0 4.4E-31 1.5E-35 233.0 34.9 234 15-249 35-308 (312)
18 2ymu_A WD-40 repeat protein; u 100.0 2E-31 6.9E-36 254.8 34.0 230 16-250 275-536 (577)
19 3frx_A Guanine nucleotide-bind 100.0 1E-31 3.5E-36 237.9 29.6 207 36-244 8-259 (319)
20 2hes_X YDR267CP; beta-propelle 100.0 2.5E-31 8.7E-36 236.5 31.0 233 17-250 26-325 (330)
21 1nr0_A Actin interacting prote 100.0 3.6E-31 1.2E-35 254.8 33.7 234 17-251 162-565 (611)
22 2ymu_A WD-40 repeat protein; u 100.0 4.7E-31 1.6E-35 252.3 34.1 229 16-249 316-576 (577)
23 1erj_A Transcriptional repress 100.0 1.1E-30 3.8E-35 238.1 33.9 227 18-246 78-382 (393)
24 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-31 4.9E-36 239.6 27.5 215 36-250 6-280 (345)
25 3dm0_A Maltose-binding peripla 100.0 3.1E-31 1.1E-35 259.1 32.1 236 15-250 395-690 (694)
26 4gqb_B Methylosome protein 50; 100.0 6.2E-32 2.1E-36 241.5 24.2 217 27-249 16-285 (344)
27 4aez_A CDC20, WD repeat-contai 100.0 1.7E-30 5.8E-35 237.5 32.7 234 16-250 104-377 (401)
28 4ery_A WD repeat-containing pr 100.0 1.5E-30 5.2E-35 229.6 30.8 216 35-251 13-266 (312)
29 2pbi_B Guanine nucleotide-bind 100.0 1.7E-30 5.9E-35 233.4 29.9 218 36-253 55-315 (354)
30 4aow_A Guanine nucleotide-bind 100.0 3.2E-30 1.1E-34 229.7 31.2 220 31-250 24-334 (340)
31 4g56_B MGC81050 protein; prote 100.0 4.3E-31 1.5E-35 237.6 25.5 223 24-249 69-339 (357)
32 3iz6_a 40S ribosomal protein R 100.0 1.6E-31 5.5E-36 242.5 22.7 227 24-250 45-326 (380)
33 2pm7_B Protein transport prote 100.0 1.1E-30 3.7E-35 229.0 27.1 212 39-251 3-283 (297)
34 3zwl_B Eukaryotic translation 100.0 6.3E-30 2.2E-34 230.1 32.7 235 15-250 44-343 (369)
35 4g56_B MGC81050 protein; prote 100.0 9.6E-32 3.3E-36 241.8 20.6 225 20-249 21-297 (357)
36 4e54_B DNA damage-binding prot 100.0 9.1E-31 3.1E-35 241.9 25.4 223 18-241 135-419 (435)
37 2xzm_R RACK1; ribosome, transl 100.0 8.4E-30 2.9E-34 228.0 29.9 212 36-251 12-283 (343)
38 3odt_A Protein DOA1; ubiquitin 100.0 5.1E-29 1.7E-33 219.3 32.5 229 15-248 29-291 (313)
39 1gxr_A ESG1, transducin-like e 100.0 8E-29 2.7E-33 220.2 33.8 230 18-249 65-333 (337)
40 3ei3_B DNA damage-binding prot 100.0 3.1E-29 1.1E-33 227.5 31.3 233 16-250 87-379 (383)
41 1erj_A Transcriptional repress 100.0 2.2E-29 7.4E-34 229.5 29.7 207 43-251 62-339 (393)
42 3dwl_C Actin-related protein 2 100.0 5.8E-31 2E-35 238.3 18.9 210 41-251 7-280 (377)
43 4ggc_A P55CDC, cell division c 100.0 1.1E-28 3.8E-33 217.7 32.8 232 17-249 37-311 (318)
44 1r5m_A SIR4-interacting protei 100.0 2.8E-29 9.5E-34 230.3 30.0 232 17-250 60-358 (425)
45 3zwl_B Eukaryotic translation 100.0 1.3E-28 4.5E-33 221.5 32.6 227 35-264 22-303 (369)
46 3k26_A Polycomb protein EED; W 100.0 1.9E-29 6.6E-34 226.8 26.5 234 14-250 33-363 (366)
47 1r5m_A SIR4-interacting protei 100.0 3.2E-29 1.1E-33 229.9 28.3 232 15-249 120-421 (425)
48 1k8k_C P40, ARP2/3 complex 41 100.0 2.5E-28 8.6E-33 220.2 33.5 233 16-249 21-357 (372)
49 1gxr_A ESG1, transducin-like e 100.0 7.9E-29 2.7E-33 220.3 29.6 228 24-254 30-297 (337)
50 3bg1_A Protein SEC13 homolog; 100.0 3.3E-30 1.1E-34 227.9 19.5 211 40-251 8-291 (316)
51 3dm0_A Maltose-binding peripla 100.0 4.4E-29 1.5E-33 243.9 29.3 205 38-244 375-624 (694)
52 2hes_X YDR267CP; beta-propelle 100.0 7.8E-29 2.7E-33 220.4 28.3 215 34-251 3-278 (330)
53 2j04_B YDR362CP, TAU91; beta p 100.0 3.2E-29 1.1E-33 235.2 26.8 185 19-203 177-411 (524)
54 3dwl_C Actin-related protein 2 100.0 4.4E-30 1.5E-34 232.5 19.4 187 17-203 25-265 (377)
55 4a11_B DNA excision repair pro 100.0 1.3E-28 4.5E-33 224.7 29.3 238 15-253 56-365 (408)
56 1sq9_A Antiviral protein SKI8; 100.0 7.1E-29 2.4E-33 226.0 27.0 232 16-249 27-391 (397)
57 2pm9_A Protein WEB1, protein t 100.0 9E-29 3.1E-33 226.7 27.8 235 17-264 81-413 (416)
58 3f3f_A Nucleoporin SEH1; struc 100.0 1E-28 3.5E-33 220.1 26.5 236 15-251 23-335 (351)
59 3jrp_A Fusion protein of prote 100.0 5.8E-29 2E-33 224.8 24.4 214 36-250 2-284 (379)
60 3vl1_A 26S proteasome regulato 100.0 1.5E-28 5.1E-33 225.7 27.0 234 15-250 109-416 (420)
61 3i2n_A WD repeat-containing pr 100.0 2.1E-28 7.2E-33 219.4 27.3 226 24-250 43-350 (357)
62 3sfz_A APAF-1, apoptotic pepti 100.0 2.1E-28 7.2E-33 253.9 31.2 234 15-250 627-910 (1249)
63 2pm9_A Protein WEB1, protein t 100.0 1.7E-28 5.8E-33 224.9 25.9 230 22-252 42-336 (416)
64 3v7d_B Cell division control p 100.0 1.7E-27 5.8E-32 221.7 32.5 233 15-253 132-421 (464)
65 3sfz_A APAF-1, apoptotic pepti 100.0 9.3E-29 3.2E-33 256.5 25.4 234 15-249 973-1245(1249)
66 3mkq_A Coatomer beta'-subunit; 100.0 1.1E-27 3.6E-32 238.2 30.5 216 37-253 5-259 (814)
67 3vl1_A 26S proteasome regulato 100.0 8.1E-28 2.8E-32 220.8 27.4 234 16-251 69-363 (420)
68 3ei3_B DNA damage-binding prot 100.0 1.2E-27 4.2E-32 217.0 27.9 232 29-266 57-340 (383)
69 1k8k_C P40, ARP2/3 complex 41 100.0 1.3E-27 4.4E-32 215.6 26.4 211 41-253 4-274 (372)
70 3mkq_A Coatomer beta'-subunit; 100.0 2.7E-27 9.3E-32 235.3 31.3 230 16-246 26-296 (814)
71 2aq5_A Coronin-1A; WD40 repeat 100.0 6.9E-28 2.4E-32 220.2 24.0 233 7-239 37-330 (402)
72 4h5i_A Guanine nucleotide-exch 100.0 2.1E-27 7.3E-32 214.0 26.0 196 23-248 102-338 (365)
73 3gre_A Serine/threonine-protei 100.0 1.6E-27 5.4E-32 220.2 25.7 233 15-249 76-436 (437)
74 1p22_A F-BOX/WD-repeat protein 100.0 3.3E-27 1.1E-31 218.0 27.6 222 15-245 143-406 (435)
75 3v7d_B Cell division control p 100.0 2.8E-26 9.7E-31 213.4 32.0 230 17-249 175-459 (464)
76 3dw8_B Serine/threonine-protei 100.0 7.1E-27 2.4E-31 216.2 27.7 229 15-245 40-439 (447)
77 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.9E-26 2E-30 210.2 33.8 232 15-254 129-392 (445)
78 4e54_B DNA damage-binding prot 100.0 1.1E-27 3.8E-32 221.1 21.8 227 38-265 112-387 (435)
79 3odt_A Protein DOA1; ubiquitin 100.0 2.1E-26 7E-31 202.6 27.9 209 36-251 9-253 (313)
80 1yfq_A Cell cycle arrest prote 100.0 4.2E-27 1.4E-31 209.8 23.0 224 16-245 24-315 (342)
81 3dw8_B Serine/threonine-protei 100.0 5.4E-27 1.9E-31 216.9 24.2 209 44-254 27-374 (447)
82 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.2E-26 1.8E-30 210.6 30.6 224 16-245 170-430 (445)
83 3mmy_A MRNA export factor; mRN 100.0 3.8E-26 1.3E-30 205.3 28.3 225 16-244 55-337 (368)
84 2xyi_A Probable histone-bindin 100.0 4.2E-26 1.5E-30 210.2 28.0 218 16-249 142-406 (430)
85 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.5E-26 8.7E-31 213.0 26.6 237 18-263 18-389 (450)
86 2j04_B YDR362CP, TAU91; beta p 100.0 3E-27 1E-31 221.8 19.9 213 35-250 124-425 (524)
87 1pgu_A Actin interacting prote 100.0 4.3E-26 1.5E-30 219.3 28.3 242 16-264 79-401 (615)
88 1pgu_A Actin interacting prote 100.0 4.2E-26 1.4E-30 219.4 28.2 243 17-264 31-365 (615)
89 4aez_A CDC20, WD repeat-contai 100.0 6.4E-26 2.2E-30 207.2 28.0 205 38-248 84-331 (401)
90 3jro_A Fusion protein of prote 100.0 3.9E-27 1.3E-31 231.8 20.9 213 39-252 3-284 (753)
91 3k26_A Polycomb protein EED; W 99.9 1.8E-26 6E-31 207.5 22.6 213 41-254 14-319 (366)
92 3bg1_A Protein SEC13 homolog; 99.9 4.4E-26 1.5E-30 201.4 24.4 197 15-211 25-284 (316)
93 4gq1_A NUP37; propeller, trans 99.9 3.2E-27 1.1E-31 215.1 16.0 226 17-250 103-387 (393)
94 3i2n_A WD repeat-containing pr 99.9 2.4E-26 8.2E-31 206.0 21.1 213 39-252 12-290 (357)
95 3lrv_A PRE-mRNA-splicing facto 99.9 7.1E-26 2.4E-30 202.4 23.8 235 16-256 49-336 (343)
96 2pm7_B Protein transport prote 99.9 2.2E-25 7.6E-30 195.1 26.3 196 15-210 21-275 (297)
97 1p22_A F-BOX/WD-repeat protein 99.9 5.6E-25 1.9E-29 203.1 29.4 199 42-249 130-361 (435)
98 3gre_A Serine/threonine-protei 99.9 6.5E-26 2.2E-30 209.3 22.3 203 29-234 47-315 (437)
99 2oaj_A Protein SNI1; WD40 repe 99.9 4.3E-25 1.5E-29 220.5 27.2 232 16-250 165-658 (902)
100 1l0q_A Surface layer protein; 99.9 1.1E-23 3.9E-28 191.3 33.9 230 20-253 7-275 (391)
101 1sq9_A Antiviral protein SKI8; 99.9 2.9E-24 9.8E-29 195.5 27.6 213 37-252 8-321 (397)
102 4a11_B DNA excision repair pro 99.9 8.8E-25 3E-29 199.3 24.1 215 23-253 21-276 (408)
103 2aq5_A Coronin-1A; WD40 repeat 99.9 5E-24 1.7E-28 194.6 28.1 194 14-207 93-331 (402)
104 1yfq_A Cell cycle arrest prote 99.9 1.6E-24 5.3E-29 193.1 24.1 207 41-252 7-281 (342)
105 2w18_A PALB2, fancn, partner a 99.9 5.4E-24 1.8E-28 184.5 26.0 218 15-249 53-353 (356)
106 3jrp_A Fusion protein of prote 99.9 5E-24 1.7E-28 192.3 27.2 195 16-210 24-277 (379)
107 4ggc_A P55CDC, cell division c 99.9 8.2E-24 2.8E-28 186.4 27.8 195 47-247 27-267 (318)
108 4gga_A P55CDC, cell division c 99.9 7.1E-24 2.4E-28 194.8 27.5 213 47-265 107-395 (420)
109 3vu4_A KMHSV2; beta-propeller 99.9 4.1E-24 1.4E-28 191.9 25.2 220 29-250 3-333 (355)
110 4h5i_A Guanine nucleotide-exch 99.9 6.5E-24 2.2E-28 191.3 24.3 159 22-181 154-343 (365)
111 3bws_A Protein LP49; two-domai 99.9 1.8E-23 6.3E-28 192.6 27.4 225 22-249 141-428 (433)
112 4aow_A Guanine nucleotide-bind 99.9 5.5E-23 1.9E-27 182.9 29.3 195 15-210 51-327 (340)
113 2vdu_B TRNA (guanine-N(7)-)-me 99.9 2E-23 6.8E-28 193.6 27.3 204 46-251 5-337 (450)
114 2oaj_A Protein SNI1; WD40 repe 99.9 1.7E-23 5.9E-28 209.0 27.6 201 41-243 13-297 (902)
115 2j04_A TAU60, YPL007P, hypothe 99.9 1.5E-23 5.1E-28 193.2 23.8 212 21-263 60-319 (588)
116 3f3f_A Nucleoporin SEH1; struc 99.9 5.2E-23 1.8E-27 183.1 25.7 186 39-252 5-248 (351)
117 3bws_A Protein LP49; two-domai 99.9 1.7E-22 6E-27 186.0 30.0 237 26-265 102-390 (433)
118 3mmy_A MRNA export factor; mRN 99.9 1.3E-22 4.4E-27 182.2 28.0 219 29-251 23-302 (368)
119 3lrv_A PRE-mRNA-splicing facto 99.9 5E-23 1.7E-27 183.9 24.5 174 10-183 88-294 (343)
120 2xyi_A Probable histone-bindin 99.9 2.7E-23 9.2E-28 191.5 22.3 225 39-264 122-409 (430)
121 1l0q_A Surface layer protein; 99.9 9.2E-22 3.1E-26 178.7 31.2 243 19-264 48-341 (391)
122 3jro_A Fusion protein of prote 99.9 4.8E-23 1.6E-27 202.7 24.4 189 15-203 21-268 (753)
123 2j04_A TAU60, YPL007P, hypothe 99.9 1.8E-22 6.1E-27 186.0 22.3 205 15-242 97-350 (588)
124 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.7E-21 5.8E-26 178.5 23.4 215 26-244 94-375 (415)
125 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.2E-20 4E-25 172.9 27.7 207 25-234 159-409 (415)
126 3u4y_A Uncharacterized protein 99.9 1E-19 3.5E-24 161.3 28.4 230 18-249 13-300 (331)
127 3vu4_A KMHSV2; beta-propeller 99.9 4.2E-20 1.4E-24 165.7 25.3 163 18-182 33-272 (355)
128 2w18_A PALB2, fancn, partner a 99.9 1.7E-20 5.8E-25 162.7 20.0 154 24-179 156-355 (356)
129 2ojh_A Uncharacterized protein 99.9 7.9E-20 2.7E-24 158.7 22.2 216 23-243 20-292 (297)
130 1nir_A Nitrite reductase; hemo 99.9 8.5E-19 2.9E-23 165.6 30.9 222 18-241 152-439 (543)
131 4gq1_A NUP37; propeller, trans 99.8 2.7E-20 9.4E-25 169.3 16.5 191 16-216 157-386 (393)
132 3vgz_A Uncharacterized protein 99.8 5.8E-18 2E-22 151.2 29.9 218 24-244 68-335 (353)
133 1ri6_A Putative isomerase YBHE 99.8 1.6E-17 5.4E-22 147.6 29.2 225 22-249 12-304 (343)
134 1nir_A Nitrite reductase; hemo 99.8 5.2E-17 1.8E-21 153.4 28.8 241 15-266 190-515 (543)
135 1pby_B Quinohemoprotein amine 99.8 5.9E-17 2E-21 143.5 26.3 229 18-251 4-308 (337)
136 1xfd_A DIP, dipeptidyl aminope 99.8 6.5E-18 2.2E-22 165.7 21.0 228 22-250 34-390 (723)
137 2ecf_A Dipeptidyl peptidase IV 99.8 1.2E-17 4E-22 164.3 22.6 231 16-250 49-410 (741)
138 3hfq_A Uncharacterized protein 99.8 2.8E-16 9.5E-21 140.2 27.2 224 25-250 16-314 (347)
139 3vgz_A Uncharacterized protein 99.8 3.6E-16 1.2E-20 139.4 27.3 202 46-250 41-300 (353)
140 2oit_A Nucleoporin 214KDA; NH2 99.8 2.2E-17 7.5E-22 151.8 17.7 131 44-203 91-254 (434)
141 2z3z_A Dipeptidyl aminopeptida 99.8 6.1E-17 2.1E-21 158.4 21.9 221 17-243 37-376 (706)
142 2ecf_A Dipeptidyl peptidase IV 99.8 3.2E-17 1.1E-21 161.2 20.0 203 45-250 36-364 (741)
143 2z3z_A Dipeptidyl aminopeptida 99.7 1.7E-16 5.8E-21 155.2 23.8 224 17-242 93-420 (706)
144 2ojh_A Uncharacterized protein 99.7 9.3E-17 3.2E-21 139.2 19.4 189 18-206 55-288 (297)
145 3scy_A Hypothetical bacterial 99.7 2E-15 6.7E-20 135.5 26.7 226 24-249 26-333 (361)
146 1ri6_A Putative isomerase YBHE 99.7 3.5E-15 1.2E-19 132.3 27.6 190 17-207 51-294 (343)
147 1jmx_B Amine dehydrogenase; ox 99.7 7.4E-16 2.5E-20 137.1 22.8 196 50-250 4-322 (349)
148 1xfd_A DIP, dipeptidyl aminope 99.7 4.4E-17 1.5E-21 159.8 15.5 196 47-244 18-329 (723)
149 1k32_A Tricorn protease; prote 99.7 3.3E-16 1.1E-20 159.6 22.3 179 21-203 261-485 (1045)
150 3o4h_A Acylamino-acid-releasin 99.7 6.5E-16 2.2E-20 147.7 22.0 218 18-245 36-304 (582)
151 3u4y_A Uncharacterized protein 99.7 8.9E-15 3.1E-19 129.3 26.0 202 18-219 54-302 (331)
152 3hfq_A Uncharacterized protein 99.7 4E-14 1.4E-18 126.1 29.4 189 18-206 53-302 (347)
153 1k32_A Tricorn protease; prote 99.7 3.4E-15 1.2E-19 152.2 24.7 229 23-254 315-638 (1045)
154 3o4h_A Acylamino-acid-releasin 99.7 5.9E-16 2E-20 148.0 18.1 201 45-251 21-274 (582)
155 2oit_A Nucleoporin 214KDA; NH2 99.7 6.2E-16 2.1E-20 142.1 17.3 181 25-239 23-257 (434)
156 3pe7_A Oligogalacturonate lyas 99.7 7E-15 2.4E-19 133.0 23.7 215 26-242 61-370 (388)
157 1z68_A Fibroblast activation p 99.7 1.3E-15 4.3E-20 149.4 18.1 193 7-204 20-326 (719)
158 1pby_B Quinohemoprotein amine 99.7 1.9E-14 6.5E-19 127.2 23.8 182 20-206 51-296 (337)
159 1jmx_B Amine dehydrogenase; ox 99.7 6.6E-14 2.3E-18 124.4 26.1 196 8-207 4-312 (349)
160 1z68_A Fibroblast activation p 99.6 2.2E-15 7.4E-20 147.7 12.1 198 49-249 19-340 (719)
161 3e5z_A Putative gluconolactona 99.6 6.2E-13 2.1E-17 115.7 25.4 209 35-247 17-281 (296)
162 1q7f_A NHL, brain tumor CG1071 99.6 9.4E-13 3.2E-17 113.9 26.1 162 44-207 28-224 (286)
163 3fvz_A Peptidyl-glycine alpha- 99.6 1.4E-12 4.8E-17 115.3 27.6 198 46-244 24-313 (329)
164 3pe7_A Oligogalacturonate lyas 99.6 2.1E-13 7.2E-18 123.2 22.7 181 26-206 11-254 (388)
165 1jof_A Carboxy-CIS,CIS-muconat 99.6 1.1E-12 3.8E-17 117.8 25.0 204 18-249 54-337 (365)
166 3scy_A Hypothetical bacterial 99.6 5.8E-12 2E-16 112.8 29.4 188 17-206 63-322 (361)
167 2oiz_A Aromatic amine dehydrog 99.5 2.8E-12 9.5E-17 114.9 24.6 92 24-117 30-146 (361)
168 2dg1_A DRP35, lactonase; beta 99.5 1E-11 3.4E-16 109.9 26.7 219 21-244 23-301 (333)
169 4a5s_A Dipeptidyl peptidase 4 99.5 1.8E-13 6.2E-18 134.4 16.7 176 23-203 34-273 (740)
170 3c5m_A Oligogalacturonate lyas 99.5 3.2E-12 1.1E-16 115.6 22.5 180 25-206 60-299 (396)
171 1jof_A Carboxy-CIS,CIS-muconat 99.5 5.7E-12 2E-16 113.1 22.9 219 45-265 39-341 (365)
172 3no2_A Uncharacterized protein 99.5 4.8E-11 1.6E-15 102.5 26.3 170 16-188 6-202 (276)
173 1qks_A Cytochrome CD1 nitrite 99.5 2.6E-10 8.8E-15 107.6 32.8 168 20-188 172-380 (567)
174 2gop_A Trilobed protease; beta 99.5 2.5E-11 8.4E-16 107.9 23.6 202 24-245 42-322 (347)
175 4a5s_A Dipeptidyl peptidase 4 99.5 1.3E-12 4.3E-17 128.5 16.6 192 47-241 18-278 (740)
176 3fvz_A Peptidyl-glycine alpha- 99.5 1.3E-11 4.5E-16 109.1 21.4 184 25-210 69-312 (329)
177 1q7f_A NHL, brain tumor CG1071 99.4 8E-11 2.8E-15 101.6 25.9 203 17-251 42-278 (286)
178 3c5m_A Oligogalacturonate lyas 99.4 6.2E-12 2.1E-16 113.7 19.2 214 28-242 13-302 (396)
179 3dsm_A Uncharacterized protein 99.4 3.5E-11 1.2E-15 106.2 23.5 152 21-203 60-238 (328)
180 2oiz_A Aromatic amine dehydrog 99.4 1.4E-10 5E-15 103.7 25.7 208 24-235 80-360 (361)
181 3azo_A Aminopeptidase; POP fam 99.4 2.2E-11 7.4E-16 118.1 20.4 180 24-204 46-308 (662)
182 3azo_A Aminopeptidase; POP fam 99.4 1.9E-11 6.6E-16 118.5 19.4 177 24-203 101-348 (662)
183 1rwi_B Serine/threonine-protei 99.4 2.1E-10 7.1E-15 98.0 23.2 163 17-180 36-221 (270)
184 2z2n_A Virginiamycin B lyase; 99.4 3.6E-09 1.2E-13 91.5 30.7 228 13-245 23-288 (299)
185 2dg1_A DRP35, lactonase; beta 99.3 1.1E-10 3.7E-15 103.2 18.3 202 46-249 6-259 (333)
186 3no2_A Uncharacterized protein 99.3 3.2E-10 1.1E-14 97.4 19.9 182 56-241 4-231 (276)
187 2z2n_A Virginiamycin B lyase; 99.3 1.1E-08 3.7E-13 88.5 29.7 207 40-251 9-253 (299)
188 2bkl_A Prolyl endopeptidase; m 99.3 3.8E-10 1.3E-14 110.1 20.1 195 44-240 119-380 (695)
189 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 7.4E-09 2.5E-13 90.3 25.8 207 42-250 14-296 (314)
190 1rwi_B Serine/threonine-protei 99.2 9E-10 3.1E-14 94.0 19.5 197 47-245 25-256 (270)
191 3e5z_A Putative gluconolactona 99.2 3E-09 1E-13 92.2 23.0 178 19-203 44-270 (296)
192 2xdw_A Prolyl endopeptidase; a 99.2 3E-09 1E-13 104.0 25.2 193 46-240 125-397 (710)
193 2qc5_A Streptogramin B lactona 99.2 6E-08 2.1E-12 83.7 30.6 222 16-241 31-290 (300)
194 1xip_A Nucleoporin NUP159; bet 99.2 8.3E-10 2.8E-14 98.5 18.6 137 9-184 42-194 (388)
195 3g4e_A Regucalcin; six bladed 99.2 1.7E-08 5.7E-13 87.7 26.0 192 46-240 13-259 (297)
196 3sjl_D Methylamine dehydrogena 99.2 2.9E-08 9.8E-13 88.3 27.3 225 24-253 58-363 (386)
197 3dr2_A Exported gluconolactona 99.2 1.9E-08 6.5E-13 87.6 25.2 208 36-248 35-302 (305)
198 3dsm_A Uncharacterized protein 99.2 6.8E-09 2.3E-13 91.5 22.5 177 17-197 96-319 (328)
199 2xdw_A Prolyl endopeptidase; a 99.2 4.7E-09 1.6E-13 102.6 22.8 176 26-203 152-393 (710)
200 3c75_H MADH, methylamine dehyd 99.2 2.6E-08 9E-13 90.0 25.9 226 25-254 99-403 (426)
201 2ghs_A AGR_C_1268P; regucalcin 99.2 2.9E-08 9.9E-13 87.4 25.8 189 48-239 51-288 (326)
202 2mad_H Methylamine dehydrogena 99.1 2.6E-07 9.1E-12 82.7 31.6 220 26-251 48-348 (373)
203 3hrp_A Uncharacterized protein 99.1 9.5E-08 3.2E-12 86.8 28.1 167 16-184 142-357 (409)
204 1qks_A Cytochrome CD1 nitrite 99.1 2.1E-07 7E-12 87.9 30.5 186 15-203 208-453 (567)
205 2qc5_A Streptogramin B lactona 99.1 2.1E-07 7.3E-12 80.2 28.6 208 41-250 15-257 (300)
206 2gop_A Trilobed protease; beta 99.1 9.1E-09 3.1E-13 91.2 20.0 164 26-199 86-311 (347)
207 3g4e_A Regucalcin; six bladed 99.1 3.3E-08 1.1E-12 85.8 22.9 176 23-203 33-255 (297)
208 2mad_H Methylamine dehydrogena 99.1 1.8E-07 6.1E-12 83.8 27.5 181 24-206 96-334 (373)
209 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 9E-08 3.1E-12 83.4 22.8 179 22-203 43-281 (314)
210 3hrp_A Uncharacterized protein 99.0 2.6E-07 8.9E-12 83.9 25.5 160 46-208 131-341 (409)
211 3sjl_D Methylamine dehydrogena 99.0 1.7E-07 5.7E-12 83.4 23.0 177 24-203 108-344 (386)
212 2qe8_A Uncharacterized protein 99.0 7.5E-08 2.6E-12 85.4 20.1 77 44-120 65-163 (343)
213 1kb0_A Quinohemoprotein alcoho 98.9 1.5E-07 5.2E-12 91.0 23.0 171 16-188 78-353 (677)
214 1yr2_A Prolyl oligopeptidase; 98.9 6.2E-08 2.1E-12 95.1 20.2 192 46-239 163-423 (741)
215 3c75_H MADH, methylamine dehyd 98.9 4.6E-07 1.6E-11 81.9 24.3 180 23-203 147-383 (426)
216 1xip_A Nucleoporin NUP159; bet 98.9 3.5E-08 1.2E-12 88.0 16.1 105 47-184 39-158 (388)
217 2hz6_A Endoplasmic reticulum t 98.9 4.7E-10 1.6E-14 100.6 2.7 182 15-202 9-216 (369)
218 3dr2_A Exported gluconolactona 98.9 4.1E-07 1.4E-11 79.1 20.7 174 23-203 65-290 (305)
219 3iuj_A Prolyl endopeptidase; h 98.8 1.8E-07 6.1E-12 91.1 19.0 194 44-241 127-389 (693)
220 2iwa_A Glutamine cyclotransfer 98.8 2.6E-06 8.9E-11 71.7 22.2 150 36-188 10-188 (266)
221 2ece_A 462AA long hypothetical 98.8 2.2E-06 7.5E-11 77.0 22.8 179 24-203 105-394 (462)
222 2ghs_A AGR_C_1268P; regucalcin 98.8 5.2E-06 1.8E-10 72.8 25.0 173 23-203 69-285 (326)
223 2bkl_A Prolyl endopeptidase; m 98.8 8.4E-08 2.9E-12 93.5 14.4 157 27-184 204-400 (695)
224 1mda_H Methylamine dehydrogena 98.8 6.2E-07 2.1E-11 79.7 18.6 84 26-111 47-158 (368)
225 3q7m_A Lipoprotein YFGL, BAMB; 98.8 2.3E-05 7.7E-10 70.1 29.2 234 15-253 53-337 (376)
226 3hxj_A Pyrrolo-quinoline quino 98.7 1.3E-06 4.6E-11 76.4 19.0 210 27-247 80-318 (330)
227 1yiq_A Quinohemoprotein alcoho 98.7 4.6E-06 1.6E-10 80.8 24.0 171 15-187 70-344 (689)
228 1fwx_A Nitrous oxide reductase 98.7 2.3E-06 8E-11 79.5 20.4 233 8-242 5-407 (595)
229 1kb0_A Quinohemoprotein alcoho 98.7 2.5E-06 8.4E-11 82.6 20.5 97 24-120 189-355 (677)
230 2qe8_A Uncharacterized protein 98.7 9.4E-06 3.2E-10 71.7 22.8 182 46-251 17-276 (343)
231 1yiq_A Quinohemoprotein alcoho 98.7 6.5E-06 2.2E-10 79.8 23.5 224 16-240 122-536 (689)
232 3hxj_A Pyrrolo-quinoline quino 98.6 2.7E-07 9.1E-12 80.9 12.1 179 15-203 30-228 (330)
233 1mda_H Methylamine dehydrogena 98.6 2.5E-06 8.4E-11 75.8 18.2 53 24-76 95-158 (368)
234 1yr2_A Prolyl oligopeptidase; 98.6 1.1E-06 3.9E-11 86.1 17.6 158 26-184 244-444 (741)
235 3nok_A Glutaminyl cyclase; bet 98.6 1.4E-05 4.9E-10 66.5 20.8 141 22-188 72-217 (268)
236 1npe_A Nidogen, entactin; glyc 98.6 0.00011 3.7E-09 62.2 27.1 177 24-202 57-263 (267)
237 1npe_A Nidogen, entactin; glyc 98.6 7.4E-05 2.5E-09 63.3 25.6 164 20-183 5-200 (267)
238 2ece_A 462AA long hypothetical 98.5 4.7E-05 1.6E-09 68.4 23.4 216 25-241 43-399 (462)
239 3q7m_A Lipoprotein YFGL, BAMB; 98.5 7.5E-05 2.6E-09 66.7 25.3 170 15-188 103-303 (376)
240 3nol_A Glutamine cyclotransfer 98.5 4.2E-05 1.5E-09 63.7 21.4 139 25-188 65-208 (262)
241 3nol_A Glutamine cyclotransfer 98.5 7E-05 2.4E-09 62.4 22.0 167 38-238 34-240 (262)
242 1kv9_A Type II quinohemoprotei 98.4 6.8E-05 2.3E-09 72.4 24.1 172 15-188 66-340 (668)
243 3mbr_X Glutamine cyclotransfer 98.4 7.9E-05 2.7E-09 61.5 20.5 139 25-188 43-186 (243)
244 3iuj_A Prolyl endopeptidase; h 98.4 3.4E-05 1.2E-09 75.0 21.4 173 25-203 155-384 (693)
245 2hz6_A Endoplasmic reticulum t 98.4 5.1E-08 1.8E-12 87.3 0.5 131 56-188 8-156 (369)
246 3mbr_X Glutamine cyclotransfer 98.4 0.00032 1.1E-08 57.8 23.1 165 38-236 12-217 (243)
247 1fwx_A Nitrous oxide reductase 98.4 1.5E-05 5.2E-10 74.1 16.7 181 24-205 111-403 (595)
248 3nok_A Glutaminyl cyclase; bet 98.3 0.00021 7.2E-09 59.5 20.3 165 38-237 46-249 (268)
249 2fp8_A Strictosidine synthase; 98.3 0.00037 1.3E-08 60.8 23.2 164 41-206 14-245 (322)
250 1w6s_A Methanol dehydrogenase 98.3 0.00041 1.4E-08 65.8 24.5 172 16-188 63-349 (599)
251 3qqz_A Putative uncharacterize 98.2 0.00071 2.4E-08 56.5 22.6 103 40-142 21-140 (255)
252 2ad6_A Methanol dehydrogenase 98.2 0.00086 2.9E-08 63.4 24.2 103 16-120 63-194 (571)
253 2p4o_A Hypothetical protein; p 98.1 0.003 1E-07 54.5 27.3 171 33-206 20-228 (306)
254 3v65_B Low-density lipoprotein 98.1 0.0023 8E-08 57.2 25.8 165 16-181 87-277 (386)
255 3v64_C Agrin; beta propeller, 98.1 0.0035 1.2E-07 55.2 27.5 165 16-181 44-234 (349)
256 2iwa_A Glutamine cyclotransfer 98.1 0.00011 3.8E-09 61.7 15.1 147 18-181 79-237 (266)
257 3tc9_A Hypothetical hydrolase; 98.0 0.0026 8.8E-08 57.9 22.9 126 16-142 150-289 (430)
258 3v64_C Agrin; beta propeller, 97.9 0.0086 2.9E-07 52.7 25.9 159 45-206 33-219 (349)
259 1kv9_A Type II quinohemoprotei 97.9 0.00095 3.2E-08 64.4 20.3 96 24-119 177-341 (668)
260 3v65_B Low-density lipoprotein 97.9 0.0099 3.4E-07 53.1 25.2 157 47-206 78-262 (386)
261 2ad6_A Methanol dehydrogenase 97.9 0.0018 6E-08 61.3 21.2 97 24-120 175-344 (571)
262 4a2l_A BT_4663, two-component 97.9 0.023 7.9E-07 56.0 30.1 218 24-246 234-520 (795)
263 4a2l_A BT_4663, two-component 97.8 0.034 1.2E-06 54.8 29.6 223 18-245 186-473 (795)
264 2p4o_A Hypothetical protein; p 97.8 0.0071 2.4E-07 52.1 21.4 153 23-180 51-241 (306)
265 3m0c_C LDL receptor, low-densi 97.8 0.032 1.1E-06 54.7 27.9 163 18-181 397-589 (791)
266 1flg_A Protein (quinoprotein e 97.8 0.026 8.7E-07 53.4 26.5 103 16-120 69-202 (582)
267 3v9f_A Two-component system se 97.7 0.025 8.5E-07 55.6 26.8 185 15-203 373-596 (781)
268 3p5b_L Low density lipoprotein 97.7 0.024 8.3E-07 50.9 29.0 165 16-181 83-277 (400)
269 3v9f_A Two-component system se 97.7 0.046 1.6E-06 53.7 28.9 227 16-245 222-517 (781)
270 4hw6_A Hypothetical protein, I 97.7 0.0084 2.9E-07 54.5 21.1 125 16-142 153-292 (433)
271 1w6s_A Methanol dehydrogenase 97.7 0.0056 1.9E-07 58.0 20.2 96 24-119 181-350 (599)
272 3sov_A LRP-6, low-density lipo 97.6 0.029 9.9E-07 48.6 23.7 163 18-181 6-197 (318)
273 1ijq_A LDL receptor, low-densi 97.6 0.031 1.1E-06 48.3 29.3 120 19-139 4-136 (316)
274 2fp8_A Strictosidine synthase; 97.6 0.033 1.1E-06 48.1 24.8 150 18-170 33-248 (322)
275 1flg_A Protein (quinoprotein e 97.5 0.0025 8.4E-08 60.4 15.9 59 25-83 291-363 (582)
276 3amr_A 3-phytase; beta-propell 97.5 0.022 7.7E-07 49.5 19.8 161 24-188 49-271 (355)
277 4a0p_A LRP6, LRP-6, low-densit 97.3 0.14 4.8E-06 48.8 26.5 167 16-182 6-198 (628)
278 2p9w_A MAL S 1 allergenic prot 97.2 0.032 1.1E-06 48.1 17.6 143 39-181 6-215 (334)
279 3amr_A 3-phytase; beta-propell 97.2 0.094 3.2E-06 45.6 23.5 160 56-217 39-259 (355)
280 3sov_A LRP-6, low-density lipo 97.1 0.11 3.6E-06 45.0 22.9 142 46-188 79-245 (318)
281 2xe4_A Oligopeptidase B; hydro 97.1 0.024 8.4E-07 55.4 17.9 65 47-113 175-258 (751)
282 3s94_A LRP-6, low-density lipo 97.1 0.18 6E-06 48.1 23.3 160 22-181 15-202 (619)
283 1n7d_A LDL receptor, low-densi 97.1 0.0044 1.5E-07 60.0 12.2 161 20-181 381-571 (699)
284 4hw6_A Hypothetical protein, I 97.1 0.036 1.2E-06 50.3 17.5 101 102-203 162-286 (433)
285 2xbg_A YCF48-like protein; pho 97.1 0.13 4.4E-06 44.6 23.5 195 46-243 36-270 (327)
286 1k3i_A Galactose oxidase precu 97.0 0.039 1.3E-06 53.1 18.0 90 26-115 220-327 (656)
287 3kya_A Putative phosphatase; s 97.0 0.22 7.6E-06 45.7 25.4 119 24-142 161-329 (496)
288 3tc9_A Hypothetical hydrolase; 96.9 0.033 1.1E-06 50.5 15.5 132 47-180 138-300 (430)
289 3m0c_C LDL receptor, low-densi 96.8 0.41 1.4E-05 46.9 25.6 142 46-188 471-639 (791)
290 3pbp_A Nucleoporin NUP82; beta 96.8 0.18 6.2E-06 44.9 18.7 126 18-145 34-204 (452)
291 3pbp_A Nucleoporin NUP82; beta 96.8 0.065 2.2E-06 47.7 15.9 58 124-181 67-158 (452)
292 2xbg_A YCF48-like protein; pho 96.8 0.17 5.7E-06 43.9 18.7 134 44-179 161-320 (327)
293 3p5b_L Low density lipoprotein 96.8 0.28 9.7E-06 43.8 25.3 147 59-207 85-263 (400)
294 1ijq_A LDL receptor, low-densi 96.7 0.25 8.7E-06 42.5 26.2 146 59-206 3-180 (316)
295 2ism_A Putative oxidoreductase 96.7 0.3 1E-05 42.8 25.2 94 46-141 31-153 (352)
296 1n7d_A LDL receptor, low-densi 96.4 0.0086 3E-07 58.0 8.7 141 47-188 454-621 (699)
297 2be1_A Serine/threonine-protei 96.2 0.053 1.8E-06 47.1 11.6 170 16-186 11-236 (339)
298 1k3i_A Galactose oxidase precu 96.1 0.75 2.6E-05 44.1 20.3 93 49-141 189-305 (656)
299 2xe4_A Oligopeptidase B; hydro 96.0 0.018 6.3E-07 56.3 8.8 84 124-207 175-288 (751)
300 2xzh_A Clathrin heavy chain 1; 96.0 0.66 2.2E-05 39.9 20.9 168 16-187 78-296 (365)
301 4a0p_A LRP6, LRP-6, low-densit 95.7 1.5 5.2E-05 41.7 24.0 158 25-184 59-240 (628)
302 3qqz_A Putative uncharacterize 95.6 0.8 2.7E-05 37.9 20.7 58 16-74 39-98 (255)
303 1tl2_A L10, protein (tachylect 95.6 0.39 1.3E-05 38.7 13.1 81 123-207 41-152 (236)
304 3sre_A PON1, serum paraoxonase 95.5 1.1 3.9E-05 39.1 21.4 30 46-75 50-91 (355)
305 3ii7_A Kelch-like protein 7; p 95.4 1.1 3.8E-05 38.0 16.6 119 25-144 70-211 (306)
306 2p9w_A MAL S 1 allergenic prot 95.3 0.65 2.2E-05 40.0 14.4 79 171-249 99-211 (334)
307 1tl2_A L10, protein (tachylect 95.1 0.93 3.2E-05 36.5 13.9 27 46-74 41-67 (236)
308 3ei3_A DNA damage-binding prot 94.9 3.9 0.00013 42.0 22.8 154 24-180 806-998 (1158)
309 1bpo_A Protein (clathrin); cla 94.9 2 6.9E-05 38.5 23.5 153 18-187 118-295 (494)
310 3s25_A Hypothetical 7-bladed b 94.9 1.2 4.1E-05 38.0 15.2 83 156-240 150-240 (302)
311 2xzh_A Clathrin heavy chain 1; 94.4 2.2 7.4E-05 36.7 21.2 111 26-141 50-170 (365)
312 2vpj_A Kelch-like protein 12; 94.4 1.5 5.2E-05 37.0 14.9 118 25-144 78-217 (301)
313 3kya_A Putative phosphatase; s 94.4 0.86 2.9E-05 41.8 13.6 114 94-207 154-328 (496)
314 2vpj_A Kelch-like protein 12; 94.3 2.1 7E-05 36.1 15.6 119 25-144 31-170 (301)
315 2g8s_A Glucose/sorbosone dehyd 94.2 2.1 7.1E-05 37.4 15.5 32 46-77 18-49 (353)
316 2xn4_A Kelch-like protein 2; s 94.2 2 6.8E-05 36.3 15.1 119 25-144 77-215 (302)
317 3sbq_A Nitrous-oxide reductase 93.6 0.11 3.9E-06 47.8 6.2 114 27-141 300-453 (638)
318 1xi4_A Clathrin heavy chain; a 93.6 1.3 4.4E-05 45.9 14.1 153 18-187 118-295 (1630)
319 3s94_A LRP-6, low-density lipo 93.6 5.2 0.00018 38.0 27.8 166 16-181 317-510 (619)
320 1cru_A Protein (soluble quinop 93.0 5.1 0.00017 36.3 18.7 30 46-75 27-56 (454)
321 3ii7_A Kelch-like protein 7; p 92.5 3 0.0001 35.2 13.6 90 24-115 23-131 (306)
322 2ism_A Putative oxidoreductase 92.5 5 0.00017 34.9 17.0 56 151-206 75-151 (352)
323 2xn4_A Kelch-like protein 2; s 92.5 4.3 0.00015 34.1 15.0 90 25-115 30-137 (302)
324 4gq2_M Nucleoporin NUP120; bet 92.4 9.8 0.00034 38.2 21.9 38 151-188 236-273 (950)
325 1zgk_A Kelch-like ECH-associat 92.3 3 0.0001 35.3 13.4 117 25-144 39-179 (308)
326 1zgk_A Kelch-like ECH-associat 92.3 4.2 0.00014 34.4 14.2 88 25-114 90-196 (308)
327 3a9g_A Putative uncharacterize 92.1 5.6 0.00019 34.6 25.1 31 46-77 29-59 (354)
328 4asc_A Kelch repeat and BTB do 91.3 5 0.00017 34.0 13.6 116 27-144 69-207 (315)
329 3ei3_A DNA damage-binding prot 91.0 16 0.00053 37.6 26.6 125 17-145 485-628 (1158)
330 3s25_A Hypothetical 7-bladed b 90.2 7.8 0.00027 32.9 21.3 64 50-114 108-179 (302)
331 1cru_A Protein (soluble quinop 90.2 10 0.00036 34.3 15.3 17 225-241 230-246 (454)
332 1xi4_A Clathrin heavy chain; a 90.1 4.2 0.00014 42.3 13.2 111 26-141 49-169 (1630)
333 2woz_A Kelch repeat and BTB do 89.0 9.1 0.00031 32.4 13.4 86 27-114 80-187 (318)
334 3a9g_A Putative uncharacterize 88.5 12 0.0004 32.5 23.5 58 18-76 42-114 (354)
335 3sre_A PON1, serum paraoxonase 87.9 13 0.00044 32.4 18.5 71 23-93 81-172 (355)
336 3sbq_A Nitrous-oxide reductase 87.6 18 0.00061 33.7 17.8 86 60-145 73-199 (638)
337 2zux_A YESW protein; beta-prop 87.5 18 0.00061 33.5 18.9 163 25-188 151-407 (591)
338 2be1_A Serine/threonine-protei 87.0 6.3 0.00022 34.1 10.8 114 58-188 11-137 (339)
339 2wg3_C Hedgehog-interacting pr 84.3 24 0.00081 32.0 18.4 31 46-76 14-45 (463)
340 4asc_A Kelch repeat and BTB do 84.3 18 0.0006 30.5 19.7 117 25-142 13-157 (315)
341 3das_A Putative oxidoreductase 82.0 25 0.00084 30.5 26.3 35 41-75 27-61 (347)
342 4fhn_B Nucleoporin NUP120; pro 81.3 3.5 0.00012 42.3 7.8 38 151-188 238-275 (1139)
343 1bpo_A Protein (clathrin); cla 80.4 33 0.0011 30.9 20.5 214 25-244 48-322 (494)
344 2g8s_A Glucose/sorbosone dehyd 80.0 29 0.00098 30.0 20.7 25 223-247 323-348 (353)
345 2wg3_C Hedgehog-interacting pr 79.1 37 0.0013 30.7 14.1 14 191-204 140-153 (463)
346 2uvk_A YJHT; unknown function, 78.3 31 0.0011 29.5 14.7 46 56-101 65-128 (357)
347 3f7f_A Nucleoporin NUP120; nuc 77.7 7.8 0.00027 37.1 8.2 34 153-188 224-257 (729)
348 2woz_A Kelch repeat and BTB do 76.5 33 0.0011 28.8 18.7 98 17-115 17-140 (318)
349 2zuy_A YESX protein; beta-prop 72.0 65 0.0022 30.1 17.7 162 26-188 156-411 (620)
350 3das_A Putative oxidoreductase 67.6 60 0.0021 28.0 22.7 51 24-74 52-114 (347)
351 3a0c_A Mannose/sialic acid-bin 66.6 29 0.001 24.0 10.6 16 193-208 53-68 (110)
352 3ott_A Two-component system se 66.2 97 0.0033 29.9 26.2 180 15-202 73-291 (758)
353 2zwa_A Leucine carboxyl methyl 66.2 94 0.0032 29.7 14.2 90 25-114 412-525 (695)
354 1b2p_A Protein (lectin); manno 61.9 39 0.0013 23.8 10.2 16 193-208 63-78 (119)
355 3mez_B Mannose-specific lectin 60.2 40 0.0014 23.4 9.4 47 162-208 24-74 (113)
356 3zwu_A Alkaline phosphatase PH 58.2 15 0.0005 34.5 5.6 15 154-168 479-493 (592)
357 2uvk_A YJHT; unknown function, 57.5 76 0.0026 27.0 10.1 49 25-74 168-224 (357)
358 3dzw_A Agglutinin; lectin, man 50.4 59 0.002 22.3 8.4 16 193-208 52-67 (109)
359 4gq2_M Nucleoporin NUP120; bet 47.7 35 0.0012 34.2 6.9 36 47-82 237-273 (950)
360 1xd5_A Gastrodianin-1, antifun 45.9 71 0.0024 22.0 9.9 15 193-207 52-66 (112)
361 3f7f_A Nucleoporin NUP120; nuc 42.6 43 0.0015 32.2 6.1 32 89-120 225-259 (729)
362 4a9v_A PHOX; hydrolase, beta-p 41.1 69 0.0024 29.9 7.1 15 152-166 477-491 (592)
363 3qhy_B Beta-lactamase inhibito 39.6 1.6E+02 0.0054 24.3 14.6 188 12-211 30-247 (282)
364 2zwa_A Leucine carboxyl methyl 36.4 2.9E+02 0.0099 26.3 13.2 88 26-113 469-579 (695)
365 3ott_A Two-component system se 35.9 3E+02 0.01 26.3 28.0 152 46-203 63-245 (758)
366 3q6k_A 43.2 kDa salivary prote 35.2 2.3E+02 0.0078 24.8 14.2 64 103-188 124-197 (381)
367 4h3o_A Lectin; cadmium, plant 34.8 1.1E+02 0.0037 20.9 9.5 17 193-209 53-69 (105)
368 3b7f_A Glycosyl hydrolase, BNR 34.6 2.2E+02 0.0076 24.5 17.8 68 4-73 8-87 (394)
369 1b2p_A Protein (lectin); manno 31.9 1.3E+02 0.0045 21.0 9.0 10 99-108 68-77 (119)
370 2dpf_A Curculin; sweet taste, 31.6 1.3E+02 0.0044 20.8 9.8 16 193-208 53-68 (115)
371 3zwu_A Alkaline phosphatase PH 30.3 1E+02 0.0034 29.0 6.5 49 192-240 478-548 (592)
372 4fhn_B Nucleoporin NUP120; pro 30.1 43 0.0015 34.4 4.3 24 50-73 242-265 (1139)
373 3mez_A Mannose-specific lectin 28.5 1.4E+02 0.0049 20.4 8.9 48 193-240 52-101 (111)
374 4a9v_A PHOX; hydrolase, beta-p 24.0 2.1E+02 0.0073 26.7 7.3 39 26-64 510-549 (592)
No 1
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1e-35 Score=266.05 Aligned_cols=234 Identities=16% Similarity=0.165 Sum_probs=209.5
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC-----CeEEeeccCCCe-
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG-----TELHCSKEHGEV- 88 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~- 88 (378)
....+..+.|+.|++||+.++..+..+..|...|.+++|+|+|++|++|+.|+.|++|+... .....+.+|.+.
T Consensus 67 ~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v 146 (340)
T 1got_B 67 SRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYL 146 (340)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCE
T ss_pred CCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccE
Confidence 34567778899999999999999999999999999999999999999999999999999543 245667888876
Q ss_pred eEEEE----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecC
Q 046394 89 LKLQF----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQ 150 (378)
Q Consensus 89 ~~l~~----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~ 150 (378)
.++.| .+++++.|++|++||+.+++.+..+..|.+.|.+++|+|++.+|++|+.|+. +.+|.
T Consensus 147 ~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~ 226 (340)
T 1got_B 147 SCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226 (340)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCS
T ss_pred EEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCc
Confidence 88888 8999999999999999999999999999999999999999999999999987 56799
Q ss_pred CCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee-c----CCceEEEEecCCCc----------cccCCCCCceEE
Q 046394 151 GPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL-P----GHAKTLDFSRKDSG----------DFSGSHNYNRYM 215 (378)
Q Consensus 151 ~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~-~----~~i~~~~~sp~g~~----------~~~~~~~~~~~~ 215 (378)
..|.+++|+|++++|++++.|++|++||+++++.+..+ + ..+.+++|+|+|.+ .+|+......+.
T Consensus 227 ~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~ 306 (340)
T 1got_B 227 SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG 306 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEee
Confidence 99999999999999999999999999999999888777 2 36899999999875 678877778888
Q ss_pred EeeccCCcceeeeEEcCCCCeEEEecCCCeEEEE
Q 046394 216 GYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGIL 249 (378)
Q Consensus 216 ~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~ 249 (378)
.+.+ |..+|++++|+|+|.+|++|+.||.+.+|
T Consensus 307 ~~~~-h~~~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 307 VLAG-HDNRVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp EEEC-CSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred Eeec-CCCcEEEEEEcCCCCEEEEEcCCccEEec
Confidence 8888 89999999999999988888888866655
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-35 Score=272.26 Aligned_cols=233 Identities=13% Similarity=0.135 Sum_probs=211.4
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeC-CCCeEEeeccCCCe-eEEEE
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNR-DGTELHCSKEHGEV-LKLQF 93 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~-~~~~~~~~~~~~~~-~~l~~ 93 (378)
...+..+.|+.|++||+.+++....+.+|...|.+++|+|+|.+|++|+.||.|++||. .+..+..+.+|... .+++|
T Consensus 121 ~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~ 200 (410)
T 1vyh_C 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSI 200 (410)
T ss_dssp SEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEE
Confidence 45667778999999999999999999999999999999999999999999999999995 55778889999876 99999
Q ss_pred -----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCCEE
Q 046394 94 -----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPVS 154 (378)
Q Consensus 94 -----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~v~ 154 (378)
++++|+.|++|++||+.++.++..+.+|...+.++.|+|++.+|++++.|+. +.+|...|.
T Consensus 201 ~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~ 280 (410)
T 1vyh_C 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVE 280 (410)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred eCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEE
Confidence 8999999999999999999999999999999999999999999999999987 567999999
Q ss_pred EEEEecC--------------------CCEEEEEECCCeEEEEEcCCceeeeee--c-CCceEEEEecCCCc--------
Q 046394 155 ALAFHPN--------------------GHLMATSGKDCKIKIWDLRKYEVLQTL--P-GHAKTLDFSRKDSG-------- 203 (378)
Q Consensus 155 ~~~~sp~--------------------g~~l~t~~~d~~i~iwd~~~~~~~~~~--~-~~i~~~~~sp~g~~-------- 203 (378)
+++|+|+ |.+|++|+.|++|++||++++.++.++ | ..|++++|+|+|.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~ 360 (410)
T 1vyh_C 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK 360 (410)
T ss_dssp EEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTT
T ss_pred EEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 9999996 678999999999999999999999888 3 67999999998875
Q ss_pred --cccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEE
Q 046394 204 --DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGIL 249 (378)
Q Consensus 204 --~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~ 249 (378)
.+|+.....++..+.+ |...|++++|+|++.+|++|+.||.+.+|
T Consensus 361 ~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~l~sgs~D~~i~vW 407 (410)
T 1vyh_C 361 TLRVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407 (410)
T ss_dssp EEEEECCTTSCCCEEEEC-CSSCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred eEEEEECCCCceEEEEcC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 7788888888888888 88999999999999888888877766555
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=256.94 Aligned_cols=234 Identities=17% Similarity=0.160 Sum_probs=207.9
Q ss_pred eeeEEEeccceeeeeeccccee--eEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEE
Q 046394 16 EKTWRIKQEAIAREVDILSSRN--QYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKL 91 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~--~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l 91 (378)
...+..+.|+.+++||+.++.. ...+.+|...|.+++|+|++.++++|+.|+.|++|| .++..+..+..|... .++
T Consensus 49 ~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~ 128 (321)
T 3ow8_A 49 ETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTL 128 (321)
T ss_dssp CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCE
T ss_pred CEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEE
Confidence 3567778899999999977653 457889999999999999999999999999999999 567777888887765 889
Q ss_pred EE-----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCC
Q 046394 92 QF-----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGP 152 (378)
Q Consensus 92 ~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~ 152 (378)
+| +|++++.|+.|++||+.+++....+..+...+.+++|+|++++|++++.|+. +.+|..+
T Consensus 129 ~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~ 208 (321)
T 3ow8_A 129 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMP 208 (321)
T ss_dssp EECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred EECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCc
Confidence 99 9999999999999999999999999989899999999999999999999987 5679999
Q ss_pred EEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--c-CCceEEEEecCCCc----------cccCCCCCceEEEeec
Q 046394 153 VSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--P-GHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSM 219 (378)
Q Consensus 153 v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~-~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~ 219 (378)
|.+++|+|++++|++++.|++|+|||++++.++..+ + ..|.+++|+|+|.+ .+|+..+..++..+.+
T Consensus 209 v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 288 (321)
T 3ow8_A 209 IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 288 (321)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred eeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC
Confidence 999999999999999999999999999999988888 3 67999999998764 7888888888888887
Q ss_pred cCCcceeeeEEcCCCCeEEEecCCCeEEEEE
Q 046394 220 VKGYQIGKVSFRPYEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 220 ~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~ 250 (378)
|...|++++|+|+|.+|++++.||.+.+|.
T Consensus 289 -h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 289 -HQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp -CSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred -CCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 888999999999998888887777655553
No 4
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.4e-34 Score=252.59 Aligned_cols=235 Identities=13% Similarity=0.133 Sum_probs=196.8
Q ss_pred ceeeEEEeccceeeeeeccc-----ceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe
Q 046394 15 VEKTWRIKQEAIAREVDILS-----SRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV 88 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~-----~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~ 88 (378)
....+..+.|+.|++||+.+ +..+..+.+|...|.+++|+|+|.+|++|+.|++|++|| .++..+..+.+|...
T Consensus 30 ~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~ 109 (319)
T 3frx_A 30 PNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSD 109 (319)
T ss_dssp TTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred ccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCc
Confidence 34567778889999999864 345678899999999999999999999999999999999 567778889999876
Q ss_pred -eEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCC------CCEEEEEcCCCe-----------
Q 046394 89 -LKLQF-----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPF------NGVVSLGHSGGT----------- 145 (378)
Q Consensus 89 -~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~------~~~l~~~~~d~~----------- 145 (378)
.+++| ++++++.|++|++||+. +.++..+.+|...+.+++|+|. +..|++++.|+.
T Consensus 110 v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 188 (319)
T 3frx_A 110 VMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI 188 (319)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh
Confidence 99999 89999999999999995 6677888899999999999995 448999999987
Q ss_pred ---eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--cCCceEEEEecCCCcc---------ccCCCCC
Q 046394 146 ---MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSGD---------FSGSHNY 211 (378)
Q Consensus 146 ---~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~~---------~~~~~~~ 211 (378)
+.+|...|.+++|+|+|++|++++.|++|+|||+.+++++..+ +..+.+++|+|+|.+. +|+....
T Consensus 189 ~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~ 268 (319)
T 3frx_A 189 EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQ 268 (319)
T ss_dssp EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTE
T ss_pred heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcC
Confidence 5679999999999999999999999999999999999999888 6889999999999863 3333333
Q ss_pred ceEEEeec-------cCCcceeeeEEcCCCCeEEEecCCCeEEEEE
Q 046394 212 NRYMGYSM-------VKGYQIGKVSFRPYEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 212 ~~~~~~~~-------~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~ 250 (378)
..+..+.. .+...+.+++|+|||++|++|+.||.+.+|-
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd 314 (319)
T 3frx_A 269 YLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 314 (319)
T ss_dssp EEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEE
Confidence 22322221 1345688999999998888888887665553
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=8.5e-34 Score=254.96 Aligned_cols=234 Identities=14% Similarity=0.146 Sum_probs=207.1
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC-------CeEEeeccCCC
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG-------TELHCSKEHGE 87 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~ 87 (378)
....+..+.|+.|++||..++.....+..|...|.+++|+|+|.+|++|+.|+.+++|+... .....+.+|..
T Consensus 76 ~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~ 155 (354)
T 2pbi_B 76 KRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTN 155 (354)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSS
T ss_pred CCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCC
Confidence 35677788899999999999999999999999999999999999999999999999999532 23466778887
Q ss_pred e-eEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcC--CCCEEEEEcCCCe--------------
Q 046394 88 V-LKLQF-----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNP--FNGVVSLGHSGGT-------------- 145 (378)
Q Consensus 88 ~-~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~d~~-------------- 145 (378)
. .++.| .|++++.|++|++||+.+++++..+.+|...|.+++|+| ++.+|++|+.|+.
T Consensus 156 ~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~ 235 (354)
T 2pbi_B 156 YLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA 235 (354)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEE
T ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 6 89999 899999999999999999999999999999999999988 4689999999987
Q ss_pred eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--c---CCceEEEEecCCCc----------cccCCCC
Q 046394 146 MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--P---GHAKTLDFSRKDSG----------DFSGSHN 210 (378)
Q Consensus 146 ~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~---~~i~~~~~sp~g~~----------~~~~~~~ 210 (378)
+.+|...|.+++|+|++.+|++++.|++|++||++++..+..+ + ..+.+++|+|+|.+ .+|+...
T Consensus 236 ~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~ 315 (354)
T 2pbi_B 236 FETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK 315 (354)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCC
Confidence 5679999999999999999999999999999999998887766 2 36789999998764 6788777
Q ss_pred CceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEE
Q 046394 211 YNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGIL 249 (378)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~ 249 (378)
...+..+.+ |...|++++|+|+|.+|++|+.||.+.+|
T Consensus 316 ~~~~~~l~~-h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 316 GSRVSILFG-HENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp CSEEEEECC-CSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred CceEEEEEC-CCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 777878877 89999999999999999999888877666
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.3e-34 Score=263.78 Aligned_cols=213 Identities=13% Similarity=0.077 Sum_probs=193.6
Q ss_pred eEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEEE-----EEEEEeCCCeEEEEEcC
Q 046394 38 QYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQF-----LLASINKLGQLRYQNVT 110 (378)
Q Consensus 38 ~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~~-----~l~s~~~d~~i~iwd~~ 110 (378)
...+.+|...|++++|+|++.+|++|+.||.|+||| .++.....+.+|.+. .+++| +|++|+.|++|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 567889999999999999999999999999999999 567778899999876 99999 99999999999999999
Q ss_pred CCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCCEEEEEEecCCCEEEEEECCCeEEE
Q 046394 111 MGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKI 176 (378)
Q Consensus 111 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~i 176 (378)
+++++..+.+|...|.+++|+|++.+|++|+.|+. +.+|...|.+++|+|+|.+|++++.|++|++
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~v 260 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEE
Confidence 99999999999999999999999999999999997 6689999999999999999999999999999
Q ss_pred EEcCCceeeeee---cCCceEEEEecCC--------------------C----------ccccCCCCCceEEEeeccCCc
Q 046394 177 WDLRKYEVLQTL---PGHAKTLDFSRKD--------------------S----------GDFSGSHNYNRYMGYSMVKGY 223 (378)
Q Consensus 177 wd~~~~~~~~~~---~~~i~~~~~sp~g--------------------~----------~~~~~~~~~~~~~~~~~~~~~ 223 (378)
||+.++.+...+ ...+.+++|+|++ . ..+|+.....++..+.+ |..
T Consensus 261 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~-h~~ 339 (410)
T 1vyh_C 261 WVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDN 339 (410)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC-CSS
T ss_pred EECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC-CCC
Confidence 999999988888 3678999999862 2 36788888888888888 889
Q ss_pred ceeeeEEcCCCCeEEEecCCCeEEEEEc
Q 046394 224 QIGKVSFRPYEDVLGIGHSMGVSGILIP 251 (378)
Q Consensus 224 ~v~~~~~sp~g~~l~~~~~~g~~~~~~~ 251 (378)
.|+++.|+|+|.+|++|+.||.+.+|..
T Consensus 340 ~v~~v~~~~~g~~l~s~s~D~~i~vwd~ 367 (410)
T 1vyh_C 340 WVRGVLFHSGGKFILSCADDKTLRVWDY 367 (410)
T ss_dssp CEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 9999999999999999999987776643
No 7
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.8e-34 Score=261.91 Aligned_cols=236 Identities=16% Similarity=0.114 Sum_probs=201.8
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC--------CeEEeeccCC
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG--------TELHCSKEHG 86 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~--------~~~~~~~~~~ 86 (378)
....+..+.|+.|++||+.+++....+..|...|.+++|+|+|++|++|+.|+.|++||+.. .....+.+|.
T Consensus 78 ~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~ 157 (380)
T 3iz6_a 78 KNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHK 157 (380)
T ss_dssp SSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCS
T ss_pred CCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCC
Confidence 34577788899999999999999999999999999999999999999999999999999542 1235677888
Q ss_pred Ce-eEEEE------EEEEEeCCCeEEEEEcCCCcEEEEE-----ecCCCCeeEEEEcC-CCCEEEEEcCCCe--------
Q 046394 87 EV-LKLQF------LLASINKLGQLRYQNVTMGEIVGNF-----WTGLGRTDVIRVNP-FNGVVSLGHSGGT-------- 145 (378)
Q Consensus 87 ~~-~~l~~------~l~s~~~d~~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~s~-~~~~l~~~~~d~~-------- 145 (378)
+. .++.| .|++|+.|++|++||+.+++.+..+ .+|...|.+++|+| ++.+|++|+.|+.
T Consensus 158 ~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~ 237 (380)
T 3iz6_a 158 GYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRI 237 (380)
T ss_dssp SCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTT
T ss_pred cceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCC
Confidence 75 77777 6999999999999999999998887 56788999999987 7899999999987
Q ss_pred -------eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--c--------CCceEEEEecCCCc-----
Q 046394 146 -------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--P--------GHAKTLDFSRKDSG----- 203 (378)
Q Consensus 146 -------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~--------~~i~~~~~sp~g~~----- 203 (378)
+.+|.+.|.+++|+|+|++|++++.|++|+|||++++.++..+ + ..+++++|+|+|.+
T Consensus 238 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~ 317 (380)
T 3iz6_a 238 TSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY 317 (380)
T ss_dssp TCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC
T ss_pred CCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEE
Confidence 5679999999999999999999999999999999999988777 1 13799999998875
Q ss_pred -----cccCCCCCceEEEe----eccCCcceeeeEEcCCCCeEEEecCCCeEEEEEc
Q 046394 204 -----DFSGSHNYNRYMGY----SMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIP 251 (378)
Q Consensus 204 -----~~~~~~~~~~~~~~----~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~ 251 (378)
.+|+......+..+ .+ |...|++++|+|+|.+|++|+.||.+.+|..
T Consensus 318 ~dg~i~vwd~~~~~~~~~~~~~~~~-h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 318 SNGDCYVWDTLLAEMVLNLGTLQNS-HEGRISCLGLSSDGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp TTSCEEEEETTTCCEEEEECCSCSS-CCCCCCEEEECSSSSEEEEECTTSCEEEEEC
T ss_pred CCCCEEEEECCCCceEEEEecccCC-CCCceEEEEECCCCCEEEEeeCCCCEEEEec
Confidence 56776666655554 34 8889999999999988888887776666643
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5e-33 Score=244.65 Aligned_cols=231 Identities=13% Similarity=0.077 Sum_probs=204.4
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEEE
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQF 93 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~~ 93 (378)
...+....|+.+++||+.++..+..+..|...|.+++|+|++++|++|+.|+.|++|| .++..+..+.+|.+. .+++|
T Consensus 26 ~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 105 (304)
T 2ynn_A 26 PWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAV 105 (304)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred CEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEE
Confidence 4456677899999999999999999999999999999999999999999999999999 567888999999886 99999
Q ss_pred -----EEEEEeCCCeEEEEEcCCC-cEEEEEecCCCCeeEEEEcC-CCCEEEEEcCCCe---------------eeecCC
Q 046394 94 -----LLASINKLGQLRYQNVTMG-EIVGNFWTGLGRTDVIRVNP-FNGVVSLGHSGGT---------------MLCHQG 151 (378)
Q Consensus 94 -----~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~---------------~~~h~~ 151 (378)
+|++|+.|++|++||+.++ .....+.+|...|.+++|+| ++..|++|+.|+. ..+|..
T Consensus 106 ~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~ 185 (304)
T 2ynn_A 106 HPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQER 185 (304)
T ss_dssp CSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTT
T ss_pred cCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcC
Confidence 9999999999999999887 45677888999999999999 6789999999998 234667
Q ss_pred CEEEEEEec--CCCEEEEEECCCeEEEEEcCCceeeeee--c-CCceEEEEecCCCc----------cccCCCCCceEEE
Q 046394 152 PVSALAFHP--NGHLMATSGKDCKIKIWDLRKYEVLQTL--P-GHAKTLDFSRKDSG----------DFSGSHNYNRYMG 216 (378)
Q Consensus 152 ~v~~~~~sp--~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~-~~i~~~~~sp~g~~----------~~~~~~~~~~~~~ 216 (378)
.+..++|+| ++.+|++++.|++|+|||+++++++.++ | ..+.+++|+|++.+ .+|+..+......
T Consensus 186 ~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 186 GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT 265 (304)
T ss_dssp CEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred cEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeee
Confidence 899999987 7789999999999999999999999988 3 78999999997753 7888888888888
Q ss_pred eeccCCcceeeeEEcCCCC--eEEEecCCCeEE
Q 046394 217 YSMVKGYQIGKVSFRPYED--VLGIGHSMGVSG 247 (378)
Q Consensus 217 ~~~~~~~~v~~~~~sp~g~--~l~~~~~~g~~~ 247 (378)
+.. +...+.+++|+|++. ++++|+++|.+.
T Consensus 266 ~~~-~~~~~~~~~~~~~~~~~~~asg~~~g~~~ 297 (304)
T 2ynn_A 266 LNV-GLERSWCIATHPTGRKNYIASGFDNGFTV 297 (304)
T ss_dssp ECC-SSSSEEEEEECTTCGGGCEEEEETTEEEE
T ss_pred ccC-CCccEEEEEECCCCCceEEEEecCCceEE
Confidence 877 778899999999985 689999888543
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=250.27 Aligned_cols=214 Identities=14% Similarity=0.138 Sum_probs=186.7
Q ss_pred eEEeecCCCCceEEEEcCC----CCEEEEEeCCCcEEEEeCCCC---eEEeeccCCCe-eEEEE-----EEEEEeCCCeE
Q 046394 38 QYDIMLPELGPYTLDFTSS----GRYMAAAGCKGYPYFYNRDGT---ELHCSKEHGEV-LKLQF-----LLASINKLGQL 104 (378)
Q Consensus 38 ~~~l~~~~~~v~~~~~sp~----g~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~-~~l~~-----~l~s~~~d~~i 104 (378)
...+.+|.+.|++++|+|+ +.+|++|+.|+.|+||+.... ....+.+|... .+++| ++++++.|++|
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 104 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 4456789999999999985 568999999999999995433 23568889875 99999 89999999999
Q ss_pred EEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCCEEEEEEecCCCEEEEEEC
Q 046394 105 RYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPVSALAFHPNGHLMATSGK 170 (378)
Q Consensus 105 ~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~v~~~~~sp~g~~l~t~~~ 170 (378)
++||+.+++.+..+..+...+.+++|+|++.+|++++.++. +..|...|.+++|+|+|++|++++.
T Consensus 105 ~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~ 184 (321)
T 3ow8_A 105 RLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAI 184 (321)
T ss_dssp EEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcC
Confidence 99999999999999999999999999999999999999987 4567889999999999999999999
Q ss_pred CCeEEEEEcCCceeeeee---cCCceEEEEecCCCc----------cccCCCCCceEEEeeccCCcceeeeEEcCCCCeE
Q 046394 171 DCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVL 237 (378)
Q Consensus 171 d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 237 (378)
|+.|++||+++++++..+ ..+|.+++|+|+|.+ .+|+.........+.+ |...|.+++|+|+|.+|
T Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~sp~~~~l 263 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-HASWVLNVAFCPDDTHF 263 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEE
T ss_pred CCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC-CCCceEEEEECCCCCEE
Confidence 999999999999999888 368999999998874 6777777777888887 88899999999999999
Q ss_pred EEecCCCeEEEEEcC
Q 046394 238 GIGHSMGVSGILIPG 252 (378)
Q Consensus 238 ~~~~~~g~~~~~~~~ 252 (378)
++++.||.+.+|...
T Consensus 264 ~s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 264 VSSSSDKSVKVWDVG 278 (321)
T ss_dssp EEEETTSCEEEEETT
T ss_pred EEEeCCCcEEEEeCC
Confidence 999999877766543
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.8e-33 Score=245.46 Aligned_cols=214 Identities=17% Similarity=0.128 Sum_probs=188.5
Q ss_pred eeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeC-CCCeEEeeccCCCe-eEEEE-----EEEEEeCCCeEEEEEc
Q 046394 37 NQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNR-DGTELHCSKEHGEV-LKLQF-----LLASINKLGQLRYQNV 109 (378)
Q Consensus 37 ~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~-~~~~~~~~~~~~~~-~~l~~-----~l~s~~~d~~i~iwd~ 109 (378)
....+.+|...|.+++|+|++.+|++|+.||.|++||. ++..+..+..|... .++.| +|++|+.|++|++||+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 45678899999999999999999999999999999994 56778888888876 89999 9999999999999999
Q ss_pred CCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe---------------eeecCCCEEEEEEec-CCCEEEEEECCCe
Q 046394 110 TMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT---------------MLCHQGPVSALAFHP-NGHLMATSGKDCK 173 (378)
Q Consensus 110 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~---------------~~~h~~~v~~~~~sp-~g~~l~t~~~d~~ 173 (378)
.+++.+..+..|...|.+++|+|++.+|++|+.|+. +.+|...|.+++|+| ++.+|++|+.|++
T Consensus 85 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (304)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSE
T ss_pred CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 999999999999999999999999999999999997 567999999999999 6789999999999
Q ss_pred EEEEEcCCceeeeee----cCCceEEEEec--CC----------CccccCCCCCceEEEeeccCCcceeeeEEcCCCCeE
Q 046394 174 IKIWDLRKYEVLQTL----PGHAKTLDFSR--KD----------SGDFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVL 237 (378)
Q Consensus 174 i~iwd~~~~~~~~~~----~~~i~~~~~sp--~g----------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 237 (378)
|++||++++.+...+ ...+..+.|+| ++ ...+|+.....++..+.+ |...|.++.|+|++.+|
T Consensus 165 v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l 243 (304)
T 2ynn_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG-HMSNVSFAVFHPTLPII 243 (304)
T ss_dssp EEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECSSSSEE
T ss_pred EEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC-CCCCEEEEEECCCCCEE
Confidence 999999987776655 25677888876 33 347899888888889988 88999999999999888
Q ss_pred EEecCCCeEEEEEc
Q 046394 238 GIGHSMGVSGILIP 251 (378)
Q Consensus 238 ~~~~~~g~~~~~~~ 251 (378)
++|+.||.+.+|..
T Consensus 244 ~s~s~Dg~i~iWd~ 257 (304)
T 2ynn_A 244 ISGSEDGTLKIWNS 257 (304)
T ss_dssp EEEETTSCEEEEET
T ss_pred EEEcCCCeEEEEEC
Confidence 88877776666543
No 11
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.5e-32 Score=245.84 Aligned_cols=234 Identities=15% Similarity=0.128 Sum_probs=191.9
Q ss_pred ceeeEEEeccceeeeeeccc-------ceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCC
Q 046394 15 VEKTWRIKQEAIAREVDILS-------SRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHG 86 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~-------~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~ 86 (378)
....+..+.|+.|++||+.+ +.....+.+|...|.+++|+|++.+|++|+.|+.|++|| .++..+..+.+|.
T Consensus 39 ~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~ 118 (343)
T 2xzm_R 39 SPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQ 118 (343)
T ss_dssp CCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCC
T ss_pred CCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC
Confidence 44566777889999999874 345677899999999999999999999999999999999 5677888999998
Q ss_pred Ce-eEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEEe---cCCCCeeEEEEcCCC----------CEEEEEcCCCe--
Q 046394 87 EV-LKLQF-----LLASINKLGQLRYQNVTMGEIVGNFW---TGLGRTDVIRVNPFN----------GVVSLGHSGGT-- 145 (378)
Q Consensus 87 ~~-~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~---~~~~~v~~~~~s~~~----------~~l~~~~~d~~-- 145 (378)
.. .+++| +|++++.|++|++||+.. ....... .|...+.+++|+|++ .+|++++.|+.
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 197 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLK 197 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred CcEEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence 76 99999 899999999999999974 4443433 577889999999987 78999999987
Q ss_pred -----------eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCC-ceeeeee--cCCceEEEEecCCCc--------
Q 046394 146 -----------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRK-YEVLQTL--PGHAKTLDFSRKDSG-------- 203 (378)
Q Consensus 146 -----------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~-~~~~~~~--~~~i~~~~~sp~g~~-------- 203 (378)
+.+|...|.+++|+|+|++|++++.|+.|+|||+.. ..+...+ ...+.+++|+|++.+
T Consensus 198 iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~ 277 (343)
T 2xzm_R 198 VWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQG 277 (343)
T ss_dssp EEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSC
T ss_pred EEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCC
Confidence 567999999999999999999999999999999954 4445555 467999999998875
Q ss_pred -cccCCCCCceEE--Eee-----------ccCCcceeeeEEcCCCCeEEEecCCCeEEEEE
Q 046394 204 -DFSGSHNYNRYM--GYS-----------MVKGYQIGKVSFRPYEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 204 -~~~~~~~~~~~~--~~~-----------~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~ 250 (378)
.+|+..+..... .+. + |...|++++|+|+|.+|++|+.||.+.+|.
T Consensus 278 v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 278 VKIFNLMTQSKAPVCTIEAEPITKAEGQKG-KNPQCTSLAWNALGKKLFAGFTDGVIRTFS 337 (343)
T ss_dssp EEEEESSSCCSCSEEECCCCSGGGBTTBCC-SCCCEEEEEECSSSCCEEEEETTSEEEEEE
T ss_pred EEEEEeCCCCCCceEEeecCcchhhhhhcC-CCCceEEEEECCCCCeEEEecCCceEEEEE
Confidence 455544333221 222 3 667799999999999999998888777664
No 12
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-32 Score=243.78 Aligned_cols=234 Identities=13% Similarity=0.140 Sum_probs=185.2
Q ss_pred ceeeEEEeccceeeeeecccceeeE---EeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC---CeEEeeccCCCe
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQY---DIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG---TELHCSKEHGEV 88 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~---~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~---~~~~~~~~~~~~ 88 (378)
....+..+.|+.|++||+.++.... ...+|...|.+++|+|+|++|++|+.|+.|++||... ..+..+.+|...
T Consensus 28 g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~ 107 (345)
T 3fm0_A 28 GTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENE 107 (345)
T ss_dssp SSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSC
T ss_pred CCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCC
Confidence 3456667789999999998875432 2367999999999999999999999999999999543 346778899876
Q ss_pred -eEEEE-----EEEEEeCCCeEEEEEcCCCc---EEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------
Q 046394 89 -LKLQF-----LLASINKLGQLRYQNVTMGE---IVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT-------------- 145 (378)
Q Consensus 89 -~~l~~-----~l~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-------------- 145 (378)
.+++| +|++++.|++|++||+.++. ++..+..|...|.+++|+|++.+|++++.|+.
T Consensus 108 v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~ 187 (345)
T 3fm0_A 108 VKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCC 187 (345)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEE
T ss_pred ceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEE
Confidence 99999 99999999999999998763 46677789999999999999999999999987
Q ss_pred --eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCC---------------ceeeeee----cCCceEEEEecCCCc-
Q 046394 146 --MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRK---------------YEVLQTL----PGHAKTLDFSRKDSG- 203 (378)
Q Consensus 146 --~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~---------------~~~~~~~----~~~i~~~~~sp~g~~- 203 (378)
+.+|...|.+++|+|+|++|++++.|++|+|||+.. ..++.++ ...|.+++|+|++..
T Consensus 188 ~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l 267 (345)
T 3fm0_A 188 ATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGAL 267 (345)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCE
T ss_pred EEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEE
Confidence 457999999999999999999999999999999742 1234444 257899999998775
Q ss_pred ---------cccCCCCC----ce-----EEEeeccCCcceeeeEEcCCCC-eEEEecCCCeEEEE
Q 046394 204 ---------DFSGSHNY----NR-----YMGYSMVKGYQIGKVSFRPYED-VLGIGHSMGVSGIL 249 (378)
Q Consensus 204 ---------~~~~~~~~----~~-----~~~~~~~~~~~v~~~~~sp~g~-~l~~~~~~g~~~~~ 249 (378)
.+|+.... .+ ...+.+ |...|++++|+|++. +||+|+.||.+.+|
T Consensus 268 ~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W 331 (345)
T 3fm0_A 268 ATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQA-HSQDVNCVAWNPKEPGLLASCSDDGEVAFW 331 (345)
T ss_dssp EEEETTSCEEEEEECTTSCTTSCCEEEEEEETTS-SSSCEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred EEEeCCCeEEEEEeCCCCCcceeeEEEEeeeccc-ccCcEeEeEEeCCCceEEEEcCCCCcEEEE
Confidence 34432211 11 111234 788999999999984 67766666644443
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.8e-32 Score=242.25 Aligned_cols=217 Identities=16% Similarity=0.159 Sum_probs=186.5
Q ss_pred ceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEEE-----EEEEEeCCCeEEEE
Q 046394 35 SRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQF-----LLASINKLGQLRYQ 107 (378)
Q Consensus 35 ~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~~-----~l~s~~~d~~i~iw 107 (378)
......+.+|...|++++|+|++++|++|+.||.|+||| .++..+..+..|... .+++| ++++++.|+.|++|
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 345678999999999999999999999999999999999 677888888888876 89999 99999999999999
Q ss_pred EcCCC----cEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCCEEEEEEecCCCEEEEEE
Q 046394 108 NVTMG----EIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPVSALAFHPNGHLMATSG 169 (378)
Q Consensus 108 d~~~~----~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~v~~~~~sp~g~~l~t~~ 169 (378)
|+.++ .....+.+|.+.+.++.|++++. +++++.|+. +.+|.+.|.+++|+|++++|++++
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~ 203 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGA 203 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEe
Confidence 99875 35677888999999999999876 777777776 567999999999999999999999
Q ss_pred CCCeEEEEEcCCceeeeee---cCCceEEEEecCCCc----------cccCCCCCceEEEeec-cCCcceeeeEEcCCCC
Q 046394 170 KDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSM-VKGYQIGKVSFRPYED 235 (378)
Q Consensus 170 ~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~g~ 235 (378)
.|++|++||++++.++.++ ...|++++|+|+|.+ .+|+......+..+.. .+...|++++|+|+|.
T Consensus 204 ~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 283 (340)
T 1got_B 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR 283 (340)
T ss_dssp TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS
T ss_pred CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCC
Confidence 9999999999999998888 368999999998774 6777766666555532 1234799999999999
Q ss_pred eEEEecCCCeEEEEEcC
Q 046394 236 VLGIGHSMGVSGILIPG 252 (378)
Q Consensus 236 ~l~~~~~~g~~~~~~~~ 252 (378)
+|++|+.||.+.+|...
T Consensus 284 ~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 284 LLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp EEEEEETTSEEEEEETT
T ss_pred EEEEECCCCeEEEEEcc
Confidence 99999999987777543
No 14
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.2e-31 Score=244.91 Aligned_cols=231 Identities=14% Similarity=0.152 Sum_probs=198.0
Q ss_pred eeEEEeccceeeeeecccceeeEEee--cCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEE
Q 046394 17 KTWRIKQEAIAREVDILSSRNQYDIM--LPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQ 92 (378)
Q Consensus 17 ~~~~~~~~~~i~~~d~~~~~~~~~l~--~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~ 92 (378)
..+.+.-|+.|++||+.+++....+. .|...|++++|+|+|++||+|+.||.|+||| .++..+..+.+|... .++.
T Consensus 117 n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s 196 (420)
T 4gga_A 117 NVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLS 196 (420)
T ss_dssp SEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEe
Confidence 46677779999999999998776655 5677899999999999999999999999999 567788899999876 8888
Q ss_pred E---EEEEEeCCCeEEEEEcCCC-cEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe------------------eeecC
Q 046394 93 F---LLASINKLGQLRYQNVTMG-EIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT------------------MLCHQ 150 (378)
Q Consensus 93 ~---~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~------------------~~~h~ 150 (378)
+ ++++|+.|+.+.+||.... ..+..+..|...+..+.|+|++.++++++.|+. ...|.
T Consensus 197 ~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~ 276 (420)
T 4gga_A 197 WNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQ 276 (420)
T ss_dssp EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCS
T ss_pred eCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccC
Confidence 8 9999999999999999864 567788899999999999999999999999987 45688
Q ss_pred CCEEEEEEecCC-CEEEEE--ECCCeEEEEEcCCceeeeee--cCCceEEEEecCCC------------ccccCCCCCce
Q 046394 151 GPVSALAFHPNG-HLMATS--GKDCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDS------------GDFSGSHNYNR 213 (378)
Q Consensus 151 ~~v~~~~~sp~g-~~l~t~--~~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~------------~~~~~~~~~~~ 213 (378)
..|.+++|+|.+ .+++++ +.|++|++||+.++.++..+ +..+.++.|+|++. ..+|+..+..+
T Consensus 277 ~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~ 356 (420)
T 4gga_A 277 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK 356 (420)
T ss_dssp SCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE
T ss_pred CceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcE
Confidence 899999999954 556654 47999999999999998888 67889999988665 46788888889
Q ss_pred EEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEE
Q 046394 214 YMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGI 248 (378)
Q Consensus 214 ~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~ 248 (378)
+..+.+ |..+|++++|+|||.+|++|+.||.+.+
T Consensus 357 v~~l~g-H~~~V~~l~~spdg~~l~S~s~D~tvri 390 (420)
T 4gga_A 357 VAELKG-HTSRVLSLTMSPDGATVASAAADETLRL 390 (420)
T ss_dssp EEEECC-CSSCEEEEEECTTSSCEEEEETTTEEEE
T ss_pred EEEEcC-CCCCEEEEEEcCCCCEEEEEecCCeEEE
Confidence 999988 9999999999999977776666664333
No 15
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6e-32 Score=241.56 Aligned_cols=203 Identities=12% Similarity=0.074 Sum_probs=158.6
Q ss_pred eeeEEEeccceeeeeecccceeeEE----eecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-e
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYD----IMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-L 89 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~----l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~ 89 (378)
...+....++.|++||+.+++.... +.+|...|++++|+|+|++|++|+.||.|++|| .++..+..+.+|... .
T Consensus 94 ~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~ 173 (344)
T 4gqb_B 94 RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVT 173 (344)
T ss_dssp TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceE
Confidence 4567778899999999999876544 458999999999999999999999999999999 567788999999876 9
Q ss_pred EEEE------EEEEEeCCCeEEEEEcCCCcEEEEEec--CCCCeeEEEEcCCC-CEEEEEcCCCe--------------e
Q 046394 90 KLQF------LLASINKLGQLRYQNVTMGEIVGNFWT--GLGRTDVIRVNPFN-GVVSLGHSGGT--------------M 146 (378)
Q Consensus 90 ~l~~------~l~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~~-~~l~~~~~d~~--------------~ 146 (378)
+++| +|++++.|++|++||++++++...+.. +...+.+++|+|++ .+|++|+.|+. +
T Consensus 174 ~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~ 253 (344)
T 4gqb_B 174 CVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSS 253 (344)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEE
T ss_pred EEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEE
Confidence 9999 789999999999999999998877643 34457777777744 56777777775 5
Q ss_pred eecCCCEEEEEEecCC-CEEEEEECCCeEEEEEcCCceeeeeecCCceEEEEecCCCccccCCCCCceEEEeeccCCcce
Q 046394 147 LCHQGPVSALAFHPNG-HLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKDSGDFSGSHNYNRYMGYSMVKGYQI 225 (378)
Q Consensus 147 ~~h~~~v~~~~~sp~g-~~l~t~~~d~~i~iwd~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~~~~~~~~~~~~~v 225 (378)
.+|...|++++|+|+| ++|++++.|++|+|||+.++++ ..+.+ |...|
T Consensus 254 ~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~------------------------------~~~~~-H~~~V 302 (344)
T 4gqb_B 254 AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL------------------------------FRSQA-HRDFV 302 (344)
T ss_dssp ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE------------------------------EEECC-CSSCE
T ss_pred cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE------------------------------EEEcC-CCCCE
Confidence 6677777777777776 4677777777777777765432 23445 88899
Q ss_pred eeeEEcCCCC-eEEEecCCCeEEEE
Q 046394 226 GKVSFRPYED-VLGIGHSMGVSGIL 249 (378)
Q Consensus 226 ~~~~~sp~g~-~l~~~~~~g~~~~~ 249 (378)
++++|+|++. +|++|+.||.+.+|
T Consensus 303 ~~v~~sp~~~~llas~s~D~~v~~w 327 (344)
T 4gqb_B 303 RDATWSPLNHSLLTTVGWDHQVVHH 327 (344)
T ss_dssp EEEEECSSSTTEEEEEETTSCEEEE
T ss_pred EEEEEeCCCCeEEEEEcCCCeEEEE
Confidence 9999999986 34455555544333
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.2e-32 Score=259.70 Aligned_cols=232 Identities=16% Similarity=0.100 Sum_probs=195.3
Q ss_pred eEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCC-CC--eEEe-------------
Q 046394 18 TWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRD-GT--ELHC------------- 81 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~-~~--~~~~------------- 81 (378)
.+....++.+.+||+.++.....+.+|...|++++|||+|++||+|+.||+|+|||.. +. ....
T Consensus 32 ~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~f 111 (611)
T 1nr0_A 32 KIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISW 111 (611)
T ss_dssp EEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEE
T ss_pred EEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEE
Confidence 3344456799999999999999999999999999999999999999999999999952 21 1112
Q ss_pred -------------------------------eccCCCe-eEEEE------EEEEEeCCCeEEEEEcCCCcEEEEEecCCC
Q 046394 82 -------------------------------SKEHGEV-LKLQF------LLASINKLGQLRYQNVTMGEIVGNFWTGLG 123 (378)
Q Consensus 82 -------------------------------~~~~~~~-~~l~~------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 123 (378)
+.+|... .+++| .|++++.|++|++||..++++...+.+|..
T Consensus 112 s~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~ 191 (611)
T 1nr0_A 112 DSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK 191 (611)
T ss_dssp CTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSS
T ss_pred CCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccC
Confidence 2344444 77777 599999999999999999999999999999
Q ss_pred CeeEEEEcCCCCEEEEEcCCCe--------------e-e------ecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCc
Q 046394 124 RTDVIRVNPFNGVVSLGHSGGT--------------M-L------CHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKY 182 (378)
Q Consensus 124 ~v~~~~~s~~~~~l~~~~~d~~--------------~-~------~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~ 182 (378)
.|.+++|+|++.+|++++.|+. + . +|.+.|.+++|+|+|++|++++.|++|+|||+.++
T Consensus 192 ~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 192 FVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL 271 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 9999999999999999999997 2 2 79999999999999999999999999999999999
Q ss_pred eeeeee--c----CCceEE--------EEecCCCccccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEE
Q 046394 183 EVLQTL--P----GHAKTL--------DFSRKDSGDFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGI 248 (378)
Q Consensus 183 ~~~~~~--~----~~i~~~--------~~sp~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~ 248 (378)
+++.++ + .....+ +.+.+|...+|+.....+...+.+ |...|++++|+|+|++|++++.||.+.+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g-h~~~v~~l~~spdg~~l~s~s~D~~v~~ 350 (611)
T 1nr0_A 272 KVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYG-HNKAITALSSSADGKTLFSADAEGHINS 350 (611)
T ss_dssp EEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcC-CCCCEEEEEEeCCCCEEEEEeCCCcEEE
Confidence 988777 1 122233 344566678888777777777777 8899999999999999999999998887
Q ss_pred EE
Q 046394 249 LI 250 (378)
Q Consensus 249 ~~ 250 (378)
|.
T Consensus 351 Wd 352 (611)
T 1nr0_A 351 WD 352 (611)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 17
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.4e-31 Score=233.00 Aligned_cols=234 Identities=15% Similarity=0.161 Sum_probs=200.8
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEE
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQ 92 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~ 92 (378)
....+....++.+++|++.+++....+.+|...|.+++|+|++++|++|+.||.|++|| .++..+..+.+|... .++.
T Consensus 35 ~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~ 114 (312)
T 4ery_A 35 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN 114 (312)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred CCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 34566677899999999999999999999999999999999999999999999999999 567788889999876 8999
Q ss_pred E-----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe---------------eeecCCC
Q 046394 93 F-----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT---------------MLCHQGP 152 (378)
Q Consensus 93 ~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~---------------~~~h~~~ 152 (378)
| ++++++.|+.|++||+.+++.+..+..|...+.+++|+|++.+|++++.|+. ...+...
T Consensus 115 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 194 (312)
T 4ery_A 115 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 194 (312)
T ss_dssp ECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCC
T ss_pred EcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCc
Confidence 9 9999999999999999999999999999999999999999999999999987 2345678
Q ss_pred EEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--c-CC--ceEEEEe-----------cCCCccccCCCCCceEEE
Q 046394 153 VSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--P-GH--AKTLDFS-----------RKDSGDFSGSHNYNRYMG 216 (378)
Q Consensus 153 v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~-~~--i~~~~~s-----------p~g~~~~~~~~~~~~~~~ 216 (378)
+.+++|+|++++|++++.|+.|++||+++++++..+ + .. .....|+ .||...+|+......+..
T Consensus 195 ~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 274 (312)
T 4ery_A 195 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 274 (312)
T ss_dssp EEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEE
T ss_pred eEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhh
Confidence 999999999999999999999999999999988877 2 11 1222232 345568899888888888
Q ss_pred eeccCCcceeeeEEcCCCCeEEEec--CCCeEEEE
Q 046394 217 YSMVKGYQIGKVSFRPYEDVLGIGH--SMGVSGIL 249 (378)
Q Consensus 217 ~~~~~~~~v~~~~~sp~g~~l~~~~--~~g~~~~~ 249 (378)
+.+ |...|.+++|+|++.+|++++ .||.+.+|
T Consensus 275 ~~~-h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W 308 (312)
T 4ery_A 275 LQG-HTDVVISTACHPTENIIASAALENDKTIKLW 308 (312)
T ss_dssp ECC-CSSCEEEEEECSSSSEEEEEECTTTCCEEEE
T ss_pred hhc-cCCcEEEEeecCcCCceEEEEccCCccEEEe
Confidence 888 889999999999998888775 34444443
No 18
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2e-31 Score=254.85 Aligned_cols=230 Identities=15% Similarity=0.223 Sum_probs=203.2
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccCCCe-eEEEE-
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEV-LKLQF- 93 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~l~~- 93 (378)
...+....++.+++||. +++....+.+|...|.+++|+|++.+|++++.||.|++||.++..+..+.+|... .+++|
T Consensus 275 ~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s 353 (577)
T 2ymu_A 275 QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFS 353 (577)
T ss_dssp SEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEEC
T ss_pred CEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEEC
Confidence 34556677899999996 4667788899999999999999999999999999999999999888899998876 89999
Q ss_pred ----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe-------------eeecCCCEEEE
Q 046394 94 ----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT-------------MLCHQGPVSAL 156 (378)
Q Consensus 94 ----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-------------~~~h~~~v~~~ 156 (378)
.+++++.|+.|++||. +++.+..+..|...|.+++|+|++++|++++.|+. +.+|...|+++
T Consensus 354 ~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~ 432 (577)
T 2ymu_A 354 PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGV 432 (577)
T ss_dssp TTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEE
T ss_pred CCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEE
Confidence 9999999999999995 67888899999999999999999999999999987 56799999999
Q ss_pred EEecCCCEEEEEECCCeEEEEEcCCceeeeee---cCCceEEEEecCCCc----------cccCCCCCceEEEeeccCCc
Q 046394 157 AFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSMVKGY 223 (378)
Q Consensus 157 ~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~~~~~ 223 (378)
+|+|++++|++++.|++|++||+ +++.+..+ ...+.+++|+|+|.+ .+|+. +...+..+.+ |..
T Consensus 433 ~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~-h~~ 509 (577)
T 2ymu_A 433 AFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-HSS 509 (577)
T ss_dssp EECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEEC-CSS
T ss_pred EECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeC-CCC
Confidence 99999999999999999999996 56666666 478999999999875 56663 4567777878 889
Q ss_pred ceeeeEEcCCCCeEEEecCCCeEEEEE
Q 046394 224 QIGKVSFRPYEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 224 ~v~~~~~sp~g~~l~~~~~~g~~~~~~ 250 (378)
.|++++|+|+|++|++++.||.+.+|.
T Consensus 510 ~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 510 SVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence 999999999999999999999877764
No 19
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1e-31 Score=237.90 Aligned_cols=207 Identities=16% Similarity=0.159 Sum_probs=183.1
Q ss_pred eeeEEeecCCCCceEEEEcCCC-CEEEEEeCCCcEEEEeCC------CCeEEeeccCCCe-eEEEE-----EEEEEeCCC
Q 046394 36 RNQYDIMLPELGPYTLDFTSSG-RYMAAAGCKGYPYFYNRD------GTELHCSKEHGEV-LKLQF-----LLASINKLG 102 (378)
Q Consensus 36 ~~~~~l~~~~~~v~~~~~sp~g-~~l~~~~~dg~i~iwd~~------~~~~~~~~~~~~~-~~l~~-----~l~s~~~d~ 102 (378)
.....+.+|.+.|.+++|+|++ ++|++|+.|++|++|+.. +.++..+.+|... .+++| ++++++.|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 3456789999999999999965 899999999999999953 3456788999886 99999 999999999
Q ss_pred eEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe-------------eeecCCCEEEEEEecC------CC
Q 046394 103 QLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT-------------MLCHQGPVSALAFHPN------GH 163 (378)
Q Consensus 103 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-------------~~~h~~~v~~~~~sp~------g~ 163 (378)
+|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|+. +.+|...|.+++|+|. +.
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 167 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSV 167 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CC
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCcc
Confidence 9999999999999999999999999999999999999999997 5679999999999984 45
Q ss_pred EEEEEECCCeEEEEEcCCceeeeee---cCCceEEEEecCCCc----------cccCCCCCceEEEeeccCCcceeeeEE
Q 046394 164 LMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSMVKGYQIGKVSF 230 (378)
Q Consensus 164 ~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~~~~~~v~~~~~ 230 (378)
+|++++.|++|++||+++++....+ ...+.+++|+|+|.+ .+|+.....++..+.. ...|.+++|
T Consensus 168 ~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~ 245 (319)
T 3frx_A 168 TIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA--QDEVFSLAF 245 (319)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC--CSCEEEEEE
T ss_pred EEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC--CCcEEEEEE
Confidence 8999999999999999999988877 378999999999875 6788888777777765 457999999
Q ss_pred cCCCCeEEEecCCC
Q 046394 231 RPYEDVLGIGHSMG 244 (378)
Q Consensus 231 sp~g~~l~~~~~~g 244 (378)
+|++.+|+++..++
T Consensus 246 sp~~~~la~~~~~~ 259 (319)
T 3frx_A 246 SPNRYWLAAATATG 259 (319)
T ss_dssp CSSSSEEEEEETTE
T ss_pred cCCCCEEEEEcCCC
Confidence 99999999887765
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-31 Score=236.53 Aligned_cols=233 Identities=10% Similarity=0.076 Sum_probs=180.5
Q ss_pred eeEEEeccceeeeeecccc--eeeEEe-ec-CCCCceEEEEcCCCCEEEEEeCCCcEEEEeCC--------CCeEEeecc
Q 046394 17 KTWRIKQEAIAREVDILSS--RNQYDI-ML-PELGPYTLDFTSSGRYMAAAGCKGYPYFYNRD--------GTELHCSKE 84 (378)
Q Consensus 17 ~~~~~~~~~~i~~~d~~~~--~~~~~l-~~-~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~--------~~~~~~~~~ 84 (378)
..+....|+.|++||+.++ .....+ .. |...|.+++|+|++++|++|+.|+.|+|||.. ...+..+.+
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 105 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG 105 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC
Confidence 5666778999999999875 344445 34 98999999999999999999999999999963 245677888
Q ss_pred CCCe-eEEEE-----EEEEEeCCCeEEEEEcCC----CcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe---------
Q 046394 85 HGEV-LKLQF-----LLASINKLGQLRYQNVTM----GEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------- 145 (378)
Q Consensus 85 ~~~~-~~l~~-----~l~s~~~d~~i~iwd~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------- 145 (378)
|... .+++| +|++|+.|++|++||+.. .+++..+..|...|.+++|+|++.+|++++.|+.
T Consensus 106 h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 106 HENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp ---CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 9876 99999 999999999999999943 2567788899999999999999999999999987
Q ss_pred -------eeecCCCEEEEEEecC--CCEEEEEECCCeEEEEEcCCc--------eeeeee----cCCceEEEEecCCC--
Q 046394 146 -------MLCHQGPVSALAFHPN--GHLMATSGKDCKIKIWDLRKY--------EVLQTL----PGHAKTLDFSRKDS-- 202 (378)
Q Consensus 146 -------~~~h~~~v~~~~~sp~--g~~l~t~~~d~~i~iwd~~~~--------~~~~~~----~~~i~~~~~sp~g~-- 202 (378)
+.+|.+.|.+++|+|+ +.+|++++.|++|+|||+..+ .+...+ ...|.+++|++++.
T Consensus 186 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~ 265 (330)
T 2hes_X 186 DWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIA 265 (330)
T ss_dssp EEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEE
T ss_pred CeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEE
Confidence 4579999999999998 778999999999999999765 334444 25789999987653
Q ss_pred -------ccccCCCCCc--eEEEe-eccCCc-ceeeeEEcC--CCCeEEEecCCCeEEEEE
Q 046394 203 -------GDFSGSHNYN--RYMGY-SMVKGY-QIGKVSFRP--YEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 203 -------~~~~~~~~~~--~~~~~-~~~~~~-~v~~~~~sp--~g~~l~~~~~~g~~~~~~ 250 (378)
..+|+..... .+... .+ |.. .|++++|+| ++.+||+|+.||.+.+|-
T Consensus 266 s~~~dg~v~iw~~~~~~~~~~~~~~~~-h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~ 325 (330)
T 2hes_X 266 SVGADGVLAVYEEVDGEWKVFAKRALC-HGVYEINVVKWLELNGKTILATGGDDGIVNFWS 325 (330)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEESCT-TTTSCEEEEEEC-----CCEEEEETTSEEEEEE
T ss_pred EEeCCCEEEEEEcCCCceEEEeccccc-cccceEEEEEEecCCCceEEEEecCCCcEEEEE
Confidence 3666654442 22222 34 555 899999999 687888777777655553
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.6e-31 Score=254.81 Aligned_cols=234 Identities=15% Similarity=0.167 Sum_probs=190.4
Q ss_pred eeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeec-------cCCCe
Q 046394 17 KTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSK-------EHGEV 88 (378)
Q Consensus 17 ~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~-------~~~~~ 88 (378)
..+..+.|+.+++||..+++....+.+|...|.+++|+|+|++||+|+.|+.|++|| .++..+..+. +|.+.
T Consensus 162 ~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~ 241 (611)
T 1nr0_A 162 RIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGS 241 (611)
T ss_dssp EEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSC
T ss_pred EEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCC
Confidence 467778899999999999999999999999999999999999999999999999999 5677777774 68765
Q ss_pred -eEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEE-------------------------------------------e
Q 046394 89 -LKLQF-----LLASINKLGQLRYQNVTMGEIVGNF-------------------------------------------W 119 (378)
Q Consensus 89 -~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~-------------------------------------------~ 119 (378)
.+++| +|++++.|++|++||+.+++++..+ .
T Consensus 242 V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~ 321 (611)
T 1nr0_A 242 VFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRY 321 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEc
Confidence 99999 9999999999999999887665433 4
Q ss_pred cCCCCeeEEEEcCCCCEEEEEcCCCe--------------e-eec-----------------------------------
Q 046394 120 TGLGRTDVIRVNPFNGVVSLGHSGGT--------------M-LCH----------------------------------- 149 (378)
Q Consensus 120 ~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~-~~h----------------------------------- 149 (378)
+|...|.+++|+|++.+|++++.|+. + .+|
T Consensus 322 gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~ 401 (611)
T 1nr0_A 322 GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVD 401 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSC
T ss_pred CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcccc
Confidence 67788999999999999999998876 0 111
Q ss_pred ----------------------------------------------CCCEEEEEEecCCCEEEEEECCCeEEEEEcCCce
Q 046394 150 ----------------------------------------------QGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYE 183 (378)
Q Consensus 150 ----------------------------------------------~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~ 183 (378)
...+.+++|+|+|++|++++.|++|+|||+.++.
T Consensus 402 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~ 481 (611)
T 1nr0_A 402 SSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGAS 481 (611)
T ss_dssp TTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTE
T ss_pred ccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCc
Confidence 2346788999999999999999999999998765
Q ss_pred e--eeee--cCCceEEEEecCCCc----------cccCCCC-CceEEE--eeccCCcceeeeEEcCCCCeEEEecCCCeE
Q 046394 184 V--LQTL--PGHAKTLDFSRKDSG----------DFSGSHN-YNRYMG--YSMVKGYQIGKVSFRPYEDVLGIGHSMGVS 246 (378)
Q Consensus 184 ~--~~~~--~~~i~~~~~sp~g~~----------~~~~~~~-~~~~~~--~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~ 246 (378)
. +... ...|++++|||||.+ .+|+... ..++.. +.+ |...|++++|+|||++||+|+.|+.+
T Consensus 482 ~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~-H~~~V~~v~fspdg~~lasgs~D~~v 560 (611)
T 1nr0_A 482 VSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTF-HTAKVACVSWSPDNVRLATGSLDNSV 560 (611)
T ss_dssp EEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCC-CSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeee-cccceeEEEECCCCCEEEEEECCCcE
Confidence 4 2333 478999999999986 4455443 333222 233 78899999999999888888877766
Q ss_pred EEEEc
Q 046394 247 GILIP 251 (378)
Q Consensus 247 ~~~~~ 251 (378)
.+|..
T Consensus 561 ~lW~~ 565 (611)
T 1nr0_A 561 IVWNM 565 (611)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 66543
No 22
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.7e-31 Score=252.34 Aligned_cols=229 Identities=16% Similarity=0.229 Sum_probs=202.5
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccCCCe-eEEEE-
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEV-LKLQF- 93 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~l~~- 93 (378)
...+....++.+++||+.. ..+..+.+|...|.+++|+|+|.+|++|+.||.|++||.++..+..+.+|... .+++|
T Consensus 316 ~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s 394 (577)
T 2ymu_A 316 QTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFS 394 (577)
T ss_dssp SEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEEC
T ss_pred CEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEEC
Confidence 4455667789999999754 45677889999999999999999999999999999999999999999999876 99999
Q ss_pred ----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe-------------eeecCCCEEEE
Q 046394 94 ----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT-------------MLCHQGPVSAL 156 (378)
Q Consensus 94 ----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-------------~~~h~~~v~~~ 156 (378)
+|++++.|+.|++||. +++.+..+..|...|.+++|+|++.+|++++.|+. +.+|...|.++
T Consensus 395 ~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~ 473 (577)
T 2ymu_A 395 PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGV 473 (577)
T ss_dssp TTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEE
T ss_pred CCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEE
Confidence 8999999999999995 67888899999999999999999999999999987 67899999999
Q ss_pred EEecCCCEEEEEECCCeEEEEEcCCceeeeee---cCCceEEEEecCCCc----------cccCCCCCceEEEeeccCCc
Q 046394 157 AFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSMVKGY 223 (378)
Q Consensus 157 ~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~~~~~ 223 (378)
+|+|++++|++++.|++|+|||. +++++..+ ...|++++|+|+|.+ .+|+. +..++..+.+ |..
T Consensus 474 ~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~-h~~ 550 (577)
T 2ymu_A 474 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-HSS 550 (577)
T ss_dssp EECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEEC-CSS
T ss_pred EEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcC-CCC
Confidence 99999999999999999999995 67888887 378999999999985 66774 5667778888 999
Q ss_pred ceeeeEEcCCCCeEEEecCCCeEEEE
Q 046394 224 QIGKVSFRPYEDVLGIGHSMGVSGIL 249 (378)
Q Consensus 224 ~v~~~~~sp~g~~l~~~~~~g~~~~~ 249 (378)
+|++++|+|||++|++++.||.+.+|
T Consensus 551 ~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 551 SVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred CEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 99999999999888888877765554
No 23
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-30 Score=238.08 Aligned_cols=227 Identities=12% Similarity=0.120 Sum_probs=185.2
Q ss_pred eEEEeccceeeeeecccceeeEEeecCCC------------------CceEEEEcCCCCEEEEEeCCCcEEEEeC-CCCe
Q 046394 18 TWRIKQEAIAREVDILSSRNQYDIMLPEL------------------GPYTLDFTSSGRYMAAAGCKGYPYFYNR-DGTE 78 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~~~~~~~l~~~~~------------------~v~~~~~sp~g~~l~~~~~dg~i~iwd~-~~~~ 78 (378)
.+....++.+++|++.++..+..+..|.. .|.+++|+|+|++|++|+.||.|+|||. ++..
T Consensus 78 ~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~ 157 (393)
T 1erj_A 78 YLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKI 157 (393)
T ss_dssp EEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcE
Confidence 33444578899999999998888766532 3889999999999999999999999995 5667
Q ss_pred EEeeccCCCe-eEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcC-CCCEEEEEcCCCe------
Q 046394 79 LHCSKEHGEV-LKLQF-----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNP-FNGVVSLGHSGGT------ 145 (378)
Q Consensus 79 ~~~~~~~~~~-~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~------ 145 (378)
+..+.+|... .+++| .|++++.|++|++||+.++++...+. +...+.+++|+| ++.+|++++.|+.
T Consensus 158 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~ 236 (393)
T 1erj_A 158 VMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDS 236 (393)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEET
T ss_pred EEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEEC
Confidence 7889999876 99999 99999999999999999999888776 457799999999 8999999999987
Q ss_pred --------e-------eecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCc------------eeeeee--c-CCceEE
Q 046394 146 --------M-------LCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKY------------EVLQTL--P-GHAKTL 195 (378)
Q Consensus 146 --------~-------~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~------------~~~~~~--~-~~i~~~ 195 (378)
+ .+|...|.+++|+|+|++|++++.|++|++||+++. .+...+ | ..+.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 316 (393)
T 1erj_A 237 ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSV 316 (393)
T ss_dssp TTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEE
T ss_pred CCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEE
Confidence 1 468899999999999999999999999999999763 233444 3 578999
Q ss_pred EEecCCCc----------cccCCCCCceEEEeeccCCcceeeeEEcC------CCCeEEEecCCCeE
Q 046394 196 DFSRKDSG----------DFSGSHNYNRYMGYSMVKGYQIGKVSFRP------YEDVLGIGHSMGVS 246 (378)
Q Consensus 196 ~~sp~g~~----------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp------~g~~l~~~~~~g~~ 246 (378)
+|+|++.+ .+|+.....++..+.+ |...|.+++|+| ++.+|++|+.||.+
T Consensus 317 ~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~-h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i 382 (393)
T 1erj_A 317 ATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG-HRNSVISVAVANGSSLGPEYNVFATGSGDCKA 382 (393)
T ss_dssp EECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSCTTCTTCEEEEEEETTSEE
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCeEEEEECC-CCCCEEEEEecCCcCcCCCCCEEEEECCCCcE
Confidence 99998764 7788888888888888 889999999986 56445444444433
No 24
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-31 Score=239.62 Aligned_cols=215 Identities=13% Similarity=0.132 Sum_probs=175.8
Q ss_pred eeeEEeecCCC-CceEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-E---EeeccCCCe-eEEEE-----EEEEEeCCCeE
Q 046394 36 RNQYDIMLPEL-GPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTE-L---HCSKEHGEV-LKLQF-----LLASINKLGQL 104 (378)
Q Consensus 36 ~~~~~l~~~~~-~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~-~---~~~~~~~~~-~~l~~-----~l~s~~~d~~i 104 (378)
..+..+.+|.. .|++++|+|+|++||+|+.|+.|+|||..+.. . ....+|... .+++| +|++++.|++|
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 45677889987 89999999999999999999999999965432 2 223678765 99999 99999999999
Q ss_pred EEEEcCCC--cEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe-----------------eeecCCCEEEEEEecCCCEE
Q 046394 105 RYQNVTMG--EIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT-----------------MLCHQGPVSALAFHPNGHLM 165 (378)
Q Consensus 105 ~iwd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-----------------~~~h~~~v~~~~~sp~g~~l 165 (378)
++||+.++ .++..+.+|...|.+++|+|++.+|++++.|+. +.+|...|.+++|+|++.+|
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELL 165 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCE
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEE
Confidence 99999876 457788899999999999999999999999987 45688999999999999999
Q ss_pred EEEECCCeEEEEEcCCcee--eeee---cCCceEEEEecCCCc----------cccCCCC---------------CceEE
Q 046394 166 ATSGKDCKIKIWDLRKYEV--LQTL---PGHAKTLDFSRKDSG----------DFSGSHN---------------YNRYM 215 (378)
Q Consensus 166 ~t~~~d~~i~iwd~~~~~~--~~~~---~~~i~~~~~sp~g~~----------~~~~~~~---------------~~~~~ 215 (378)
++++.|++|++||+.++.. ..++ ...|.+++|+|+|.+ .+|+... ...+.
T Consensus 166 ~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
T 3fm0_A 166 ASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCIC 245 (345)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEE
T ss_pred EEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeE
Confidence 9999999999999988754 4455 378999999999875 3443210 01122
Q ss_pred EeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEE
Q 046394 216 GYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 216 ~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~ 250 (378)
.+.+.|...|++++|+|++..|++++.|+.+.+|.
T Consensus 246 ~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~ 280 (345)
T 3fm0_A 246 TLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQ 280 (345)
T ss_dssp EECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred EecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 33333677899999999999999998888766654
No 25
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.1e-31 Score=259.14 Aligned_cols=236 Identities=16% Similarity=0.123 Sum_probs=195.5
Q ss_pred ceeeEEEeccceeeeeecccc-----eeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe
Q 046394 15 VEKTWRIKQEAIAREVDILSS-----RNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV 88 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~-----~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~ 88 (378)
.+..+..+.|+.|++||+.+. .....+.+|...|.+++|+|+|++|++|+.||.|+||| .++..+..+.+|...
T Consensus 395 ~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~ 474 (694)
T 3dm0_A 395 ADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKD 474 (694)
T ss_dssp CSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred CCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCC
Confidence 445677888999999998764 34567899999999999999999999999999999999 566778889999876
Q ss_pred -eEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEE---ecCCCCeeEEEEcCCC--CEEEEEcCCCe------------
Q 046394 89 -LKLQF-----LLASINKLGQLRYQNVTMGEIVGNF---WTGLGRTDVIRVNPFN--GVVSLGHSGGT------------ 145 (378)
Q Consensus 89 -~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~~~~s~~~--~~l~~~~~d~~------------ 145 (378)
.+++| +|++++.|++|++||+......... ..|...|.+++|+|++ ..|++++.|+.
T Consensus 475 v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~ 554 (694)
T 3dm0_A 475 VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLR 554 (694)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEE
Confidence 99999 8999999999999998654433322 2467889999999987 58999999987
Q ss_pred --eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--cCCceEEEEecCCCc---------cccCCCCCc
Q 046394 146 --MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSG---------DFSGSHNYN 212 (378)
Q Consensus 146 --~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~---------~~~~~~~~~ 212 (378)
+.+|.+.|++++|+|+|++|++++.|++|+|||+++++++..+ +..+.+++|+|++.+ .+|+.....
T Consensus 555 ~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 555 STLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKS 634 (694)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTE
T ss_pred EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCC
Confidence 5679999999999999999999999999999999999998888 578999999999874 667776666
Q ss_pred eEEEeecc------------------CCcceeeeEEcCCCCeEEEecCCCeEEEEE
Q 046394 213 RYMGYSMV------------------KGYQIGKVSFRPYEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 213 ~~~~~~~~------------------~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~ 250 (378)
.+..+... +...+++++|+|+|.+|++|+.||.+++|-
T Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~ 690 (694)
T 3dm0_A 635 IVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWG 690 (694)
T ss_dssp EEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEe
Confidence 65544320 112378899999998888888777665553
No 26
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.2e-32 Score=241.47 Aligned_cols=217 Identities=13% Similarity=0.119 Sum_probs=168.3
Q ss_pred eeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCC-------------CCeEEeeccCCCeeEEEE
Q 046394 27 AREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRD-------------GTELHCSKEHGEVLKLQF 93 (378)
Q Consensus 27 i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~-------------~~~~~~~~~~~~~~~l~~ 93 (378)
.+.|++..... ..|...|.+++|+|||++|++++ |+++++||.. +.....+.....+.+++|
T Consensus 16 ~r~w~~~~~~~----~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 90 (344)
T 4gqb_B 16 AREWNLPPNAP----ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTW 90 (344)
T ss_dssp -------CCSC----SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEE
T ss_pred ccccCCCCCCc----ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEE
Confidence 34566544332 34566799999999999998887 6778888721 111122233344689999
Q ss_pred ----EEEEEeCCCeEEEEEcCCCcEEEE----EecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCC
Q 046394 94 ----LLASINKLGQLRYQNVTMGEIVGN----FWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQG 151 (378)
Q Consensus 94 ----~l~s~~~d~~i~iwd~~~~~~~~~----~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~ 151 (378)
.+++|+.||+|+|||+.+++.+.. +.+|.+.|.+++|+|++++|++|+.|+. +.+|.+
T Consensus 91 s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~ 170 (344)
T 4gqb_B 91 VGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAA 170 (344)
T ss_dssp ETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred eCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCC
Confidence 899999999999999998875433 3478999999999999999999999997 678999
Q ss_pred CEEEEEEecCC-CEEEEEECCCeEEEEEcCCceeeeee-----cCCceEEEEecCCC-----------ccccCCCCCceE
Q 046394 152 PVSALAFHPNG-HLMATSGKDCKIKIWDLRKYEVLQTL-----PGHAKTLDFSRKDS-----------GDFSGSHNYNRY 214 (378)
Q Consensus 152 ~v~~~~~sp~g-~~l~t~~~d~~i~iwd~~~~~~~~~~-----~~~i~~~~~sp~g~-----------~~~~~~~~~~~~ 214 (378)
.|.+++|+|++ .+|++++.|++|+|||+++++++..+ ...+.+++|+|++. ..+|+.....++
T Consensus 171 ~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~ 250 (344)
T 4gqb_B 171 QVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCV 250 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CC
T ss_pred ceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEE
Confidence 99999999987 47899999999999999999988877 24578999998654 267888888888
Q ss_pred EEeeccCCcceeeeEEcCCC-CeEEEecCCCeEEEE
Q 046394 215 MGYSMVKGYQIGKVSFRPYE-DVLGIGHSMGVSGIL 249 (378)
Q Consensus 215 ~~~~~~~~~~v~~~~~sp~g-~~l~~~~~~g~~~~~ 249 (378)
..+.+ |...|++++|+|+| .+|++|+.||.+.+|
T Consensus 251 ~~~~~-h~~~v~~v~fsp~g~~~lasgs~D~~i~vw 285 (344)
T 4gqb_B 251 LSSAV-HSQCVTGLVFSPHSVPFLASLSEDCSLAVL 285 (344)
T ss_dssp EEEEC-CSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred EEEcC-CCCCEEEEEEccCCCeEEEEEeCCCeEEEE
Confidence 88888 89999999999998 578889888876654
No 27
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-30 Score=237.51 Aligned_cols=234 Identities=14% Similarity=0.118 Sum_probs=199.1
Q ss_pred eeeEEEeccceeeeeecccceeeEEeec-CCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEE
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIML-PELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQ 92 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~-~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~ 92 (378)
...+.+..++.|++||+.+++....+.. |...|.+++|+|++.+|++|+.||.|++|| .++..+..+.+|... .++.
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 183 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLS 183 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEE
Confidence 4577788899999999999998887776 788999999999999999999999999999 567788889888876 9999
Q ss_pred E---EEEEEeCCCeEEEEEcC-CCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCCEE
Q 046394 93 F---LLASINKLGQLRYQNVT-MGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPVS 154 (378)
Q Consensus 93 ~---~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~v~ 154 (378)
| .+++++.|+.|++||+. .+..+..+..|.+.|.+++|+|++.+|++++.|+. +..|...|.
T Consensus 184 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~ 263 (401)
T 4aez_A 184 WNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVK 263 (401)
T ss_dssp EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCC
T ss_pred ECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEE
Confidence 9 99999999999999998 46778888899999999999999999999999987 557899999
Q ss_pred EEEEecCC-CEEEEEE--CCCeEEEEEcCCceeeeee--cCCceEEEEecCCCcc------------ccCCCCCceE--E
Q 046394 155 ALAFHPNG-HLMATSG--KDCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSGD------------FSGSHNYNRY--M 215 (378)
Q Consensus 155 ~~~~sp~g-~~l~t~~--~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~~------------~~~~~~~~~~--~ 215 (378)
+++|+|++ .++++++ .|+.|++||+.+++++..+ +..+.+++|+|+|.+. +|+....... .
T Consensus 264 ~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~ 343 (401)
T 4aez_A 264 AVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQV 343 (401)
T ss_dssp EEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEE
T ss_pred EEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEE
Confidence 99999966 5566655 7999999999999999888 5789999999988764 3443332222 2
Q ss_pred EeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEE
Q 046394 216 GYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 216 ~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~ 250 (378)
.+.+ |...|.+++|+|+|.+|++++.||.+.+|-
T Consensus 344 ~~~~-h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~ 377 (401)
T 4aez_A 344 DIPA-HDTRVLYSALSPDGRILSTAASDENLKFWR 377 (401)
T ss_dssp EEEC-CSSCCCEEEECTTSSEEEEECTTSEEEEEE
T ss_pred EecC-CCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 3445 788999999999998888887777655554
No 28
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.5e-30 Score=229.56 Aligned_cols=216 Identities=17% Similarity=0.191 Sum_probs=183.4
Q ss_pred ceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEEE-----EEEEEeCCCeEEEE
Q 046394 35 SRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQF-----LLASINKLGQLRYQ 107 (378)
Q Consensus 35 ~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~~-----~l~s~~~d~~i~iw 107 (378)
....+.+.+|...|.+++|+|+|++|++|+.||.|++|+ .++.....+.+|... .+++| +|++++.|+.|++|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 345678899999999999999999999999999999999 567778888888876 99999 99999999999999
Q ss_pred EcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCCEEEEEEecCCCEEEEEECCCe
Q 046394 108 NVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPVSALAFHPNGHLMATSGKDCK 173 (378)
Q Consensus 108 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~v~~~~~sp~g~~l~t~~~d~~ 173 (378)
|+.+++.+..+..|...|.+++|+|++.+|++++.|+. +..|..+|.+++|+|++++|++++.|+.
T Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 172 (312)
T 4ery_A 93 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 172 (312)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCc
Confidence 99999999999999999999999999999999999987 5678899999999999999999999999
Q ss_pred EEEEEcCCceeeeee----cCCceEEEEecCCCc----------cccCCCCCceEEEeeccCCcceee--eEEc-CCCCe
Q 046394 174 IKIWDLRKYEVLQTL----PGHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSMVKGYQIGK--VSFR-PYEDV 236 (378)
Q Consensus 174 i~iwd~~~~~~~~~~----~~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~~~~~~v~~--~~~s-p~g~~ 236 (378)
|++||+++++.+..+ ...+..++|+|+|.+ .+|+......+..+.+ |...+.. ..|+ +++.+
T Consensus 173 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 251 (312)
T 4ery_A 173 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG-HKNEKYCIFANFSVTGGKW 251 (312)
T ss_dssp EEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECS-SCCSSSCCCEEEECSSSCE
T ss_pred EEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEe-cCCceEEEEEEEEeCCCcE
Confidence 999999999888776 357899999998875 5677777777776666 4443322 2333 56777
Q ss_pred EEEecCCCeEEEEEc
Q 046394 237 LGIGHSMGVSGILIP 251 (378)
Q Consensus 237 l~~~~~~g~~~~~~~ 251 (378)
|++|+.||.+.+|..
T Consensus 252 l~sg~~dg~i~vwd~ 266 (312)
T 4ery_A 252 IVSGSEDNLVYIWNL 266 (312)
T ss_dssp EEECCTTSCEEEEET
T ss_pred EEEECCCCEEEEEEC
Confidence 777777776665543
No 29
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.7e-30 Score=233.37 Aligned_cols=218 Identities=12% Similarity=0.103 Sum_probs=185.6
Q ss_pred eeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEEE-----EEEEEeCCCeEEEEE
Q 046394 36 RNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQF-----LLASINKLGQLRYQN 108 (378)
Q Consensus 36 ~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~~-----~l~s~~~d~~i~iwd 108 (378)
.....+.+|...|++++|+|++++|++|+.||.|+||| .++.....+..|... .+++| .+++++.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 45678999999999999999999999999999999999 667778888888765 89999 999999999999999
Q ss_pred cCCC------cEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCCEEEEEEec--CCCEEE
Q 046394 109 VTMG------EIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPVSALAFHP--NGHLMA 166 (378)
Q Consensus 109 ~~~~------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~v~~~~~sp--~g~~l~ 166 (378)
+... .....+..|...|.+++|+|++..|++++.|+. +.+|...|.+++|+| +|++|+
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~ 214 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 214 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEE
Confidence 8643 245567789999999999999999999999997 678999999999988 578999
Q ss_pred EEECCCeEEEEEcCCceeeeee---cCCceEEEEecCCCc----------cccCCCCCceEEEeec-cCCcceeeeEEcC
Q 046394 167 TSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSM-VKGYQIGKVSFRP 232 (378)
Q Consensus 167 t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp 232 (378)
+++.|++|++||+++++++..+ ...|++++|+|+|.+ .+|+......+..+.. .+...+.+++|+|
T Consensus 215 sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~ 294 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSL 294 (354)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred EEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeC
Confidence 9999999999999999998888 368999999998764 6677666655554433 1234688999999
Q ss_pred CCCeEEEecCCCeEEEEEcCC
Q 046394 233 YEDVLGIGHSMGVSGILIPGS 253 (378)
Q Consensus 233 ~g~~l~~~~~~g~~~~~~~~s 253 (378)
+|.+|++|+.||.+.+|....
T Consensus 295 ~g~~l~~g~~d~~i~vwd~~~ 315 (354)
T 2pbi_B 295 SGRLLFAGYNDYTINVWDVLK 315 (354)
T ss_dssp TSSEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEECCCcEEEEECCC
Confidence 999999999998887776433
No 30
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.2e-30 Score=229.75 Aligned_cols=220 Identities=15% Similarity=0.098 Sum_probs=176.7
Q ss_pred ecccceeeEEeecCCCCceEEEEcCC-CCEEEEEeCCCcEEEEeCCC------CeEEeeccCCCe-eEEEE-----EEEE
Q 046394 31 DILSSRNQYDIMLPELGPYTLDFTSS-GRYMAAAGCKGYPYFYNRDG------TELHCSKEHGEV-LKLQF-----LLAS 97 (378)
Q Consensus 31 d~~~~~~~~~l~~~~~~v~~~~~sp~-g~~l~~~~~dg~i~iwd~~~------~~~~~~~~~~~~-~~l~~-----~l~s 97 (378)
..++.....+|.+|.+.|++|+|+|+ +++||||+.||+|+|||+.. .+...+.+|... .+++| +|++
T Consensus 24 ~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s 103 (340)
T 4aow_A 24 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 103 (340)
T ss_dssp --CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred cCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEE
Confidence 34445566789999999999999997 68999999999999999432 346778899876 99999 9999
Q ss_pred EeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------------------------
Q 046394 98 INKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT-------------------------------- 145 (378)
Q Consensus 98 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-------------------------------- 145 (378)
++.|+.|++|+............+...+..+.+++++.+|++++.|+.
T Consensus 104 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 183 (340)
T 4aow_A 104 GSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS 183 (340)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCS
T ss_pred EcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCC
Confidence 999999999999887776666666666666666666666666665554
Q ss_pred ---------------------------eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--cCCceEEE
Q 046394 146 ---------------------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLD 196 (378)
Q Consensus 146 ---------------------------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~~~i~~~~ 196 (378)
+.+|.++|++++|+|++++|++++.|+.|++||+++.+++..+ +..+.++.
T Consensus 184 ~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~ 263 (340)
T 4aow_A 184 SNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 263 (340)
T ss_dssp SSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEE
T ss_pred CCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeee
Confidence 5678999999999999999999999999999999999999888 67899999
Q ss_pred EecCCCc---------cccCCCCCceEEEeec--------cCCcceeeeEEcCCCCeEEEecCCCeEEEEE
Q 046394 197 FSRKDSG---------DFSGSHNYNRYMGYSM--------VKGYQIGKVSFRPYEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 197 ~sp~g~~---------~~~~~~~~~~~~~~~~--------~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~ 250 (378)
|+|++.+ .+|+......+..+.. .|...|++++|+|+|++|++|+.||.+.+|-
T Consensus 264 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~ 334 (340)
T 4aow_A 264 FSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ 334 (340)
T ss_dssp ECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 9998764 5666655544433321 2678899999999999988888888776664
No 31
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.3e-31 Score=237.56 Aligned_cols=223 Identities=10% Similarity=0.076 Sum_probs=177.0
Q ss_pred cceeeeeecccceee----EEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeC-CCCeE----EeeccCCCe-eEEEE
Q 046394 24 EAIAREVDILSSRNQ----YDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNR-DGTEL----HCSKEHGEV-LKLQF 93 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~----~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~-~~~~~----~~~~~~~~~-~~l~~ 93 (378)
|+.+++|+..++... .....|..+|.+++|+|++. +++++.||.|+|||+ ++..+ ....+|... ++++|
T Consensus 69 d~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~ 147 (357)
T 4g56_B 69 GGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSV 147 (357)
T ss_dssp CEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEE
T ss_pred cCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEE
Confidence 577888988776543 34457888999999999985 556788999999995 33332 234567765 99999
Q ss_pred -----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCC-EEEEEcCCCe----------------eeecCC
Q 046394 94 -----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNG-VVSLGHSGGT----------------MLCHQG 151 (378)
Q Consensus 94 -----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~----------------~~~h~~ 151 (378)
+|++++.|++|++||+.+++++..+..|...|.+++|+|++. ++++++.|+. ...|..
T Consensus 148 spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~ 227 (357)
T 4g56_B 148 FSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDT 227 (357)
T ss_dssp CSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCS
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccc
Confidence 999999999999999999999999999999999999999985 7888988886 234667
Q ss_pred CEEEEEEecC-CCEEEEEECCCeEEEEEcCCceeeeee---cCCceEEEEecCCCc-----------cccCCCCCceEEE
Q 046394 152 PVSALAFHPN-GHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSG-----------DFSGSHNYNRYMG 216 (378)
Q Consensus 152 ~v~~~~~sp~-g~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g~~-----------~~~~~~~~~~~~~ 216 (378)
.+.+++|+|+ +.+|++++.|+.|++||+++++++.++ ...|++++|+|++.. .+|+....+++..
T Consensus 228 ~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 228 IPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp CEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE
T ss_pred cccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE
Confidence 8999999996 578999999999999999999998888 478999999998742 6788777776654
Q ss_pred eeccCCcceeeeEEcC-CCCeEEEecCCCeEEEE
Q 046394 217 YSMVKGYQIGKVSFRP-YEDVLGIGHSMGVSGIL 249 (378)
Q Consensus 217 ~~~~~~~~v~~~~~sp-~g~~l~~~~~~g~~~~~ 249 (378)
. + |...|++|+|+| ++.+|++|+.||.+.+|
T Consensus 308 ~-~-H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW 339 (357)
T 4g56_B 308 L-S-HRDFVTGVAWSPLDHSKFTTVGWDHKVLHH 339 (357)
T ss_dssp C-C-CSSCEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred C-C-CCCCEEEEEEeCCCCCEEEEEcCCCeEEEE
Confidence 4 5 888999999999 78777777666644444
No 32
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.6e-31 Score=242.50 Aligned_cols=227 Identities=16% Similarity=0.156 Sum_probs=190.5
Q ss_pred cceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEEE-----EEE
Q 046394 24 EAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQF-----LLA 96 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~~-----~l~ 96 (378)
...+..|+..+......+.+|.+.|++++|+|++++|++|+.||+|+||| .++..+..+..|... .+++| +++
T Consensus 45 ~~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~la 124 (380)
T 3iz6_a 45 GRTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVA 124 (380)
T ss_dssp GGGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEE
T ss_pred cccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEE
Confidence 44556688888888899999999999999999999999999999999999 567788889999876 88999 999
Q ss_pred EEeCCCeEEEEEcCCCc-------EEEEEecCCCCeeEEEEcCCC-CEEEEEcCCCe--------------e-----eec
Q 046394 97 SINKLGQLRYQNVTMGE-------IVGNFWTGLGRTDVIRVNPFN-GVVSLGHSGGT--------------M-----LCH 149 (378)
Q Consensus 97 s~~~d~~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~--------------~-----~~h 149 (378)
+|+.|+.+++||+.+.. ....+.+|.+.+.++.|+|++ ..|++|+.|+. + .+|
T Consensus 125 s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h 204 (380)
T 3iz6_a 125 CGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH 204 (380)
T ss_dssp ECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC
T ss_pred EeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC
Confidence 99999999999987532 344567889999999999975 57999999987 1 568
Q ss_pred CCCEEEEEEec-CCCEEEEEECCCeEEEEEcCC-ceeeeee--c-CCceEEEEecCCCc----------cccCCCCCceE
Q 046394 150 QGPVSALAFHP-NGHLMATSGKDCKIKIWDLRK-YEVLQTL--P-GHAKTLDFSRKDSG----------DFSGSHNYNRY 214 (378)
Q Consensus 150 ~~~v~~~~~sp-~g~~l~t~~~d~~i~iwd~~~-~~~~~~~--~-~~i~~~~~sp~g~~----------~~~~~~~~~~~ 214 (378)
...|.+++|+| ++++|++|+.|++|++||++. +.++..+ | ..|++++|+|+|.+ .+|+......+
T Consensus 205 ~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 205 TADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEE
T ss_pred ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEE
Confidence 89999999987 889999999999999999984 5667777 3 78999999998874 67777777776
Q ss_pred EEeecc------CCcceeeeEEcCCCCeEEEecCCCeEEEEE
Q 046394 215 MGYSMV------KGYQIGKVSFRPYEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 215 ~~~~~~------~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~ 250 (378)
..+... +...|++++|+|+|.+|++|+.+|.+.+|.
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd 326 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWD 326 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEE
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEE
Confidence 665441 112489999999999999999998776554
No 33
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.1e-30 Score=229.00 Aligned_cols=212 Identities=14% Similarity=0.109 Sum_probs=174.7
Q ss_pred EEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCC---CCeEEeeccCCCe-eEEEE-------EEEEEeCCCeEEEE
Q 046394 39 YDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRD---GTELHCSKEHGEV-LKLQF-------LLASINKLGQLRYQ 107 (378)
Q Consensus 39 ~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~-~~l~~-------~l~s~~~d~~i~iw 107 (378)
..+.+|...|.+++|+|+|++||+|+.|+.|+|||.. ...+..+.+|.+. .+++| +|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 4567899999999999999999999999999999964 3567889999986 99998 89999999999999
Q ss_pred EcCCCc--EEEEEecCCCCeeEEEEcCC--CCEEEEEcCCCe----------------eeecCCCEEEEEEecC------
Q 046394 108 NVTMGE--IVGNFWTGLGRTDVIRVNPF--NGVVSLGHSGGT----------------MLCHQGPVSALAFHPN------ 161 (378)
Q Consensus 108 d~~~~~--~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~----------------~~~h~~~v~~~~~sp~------ 161 (378)
|+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+. +.+|...|.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 998874 56677788999999999998 889999999986 3568889999999997
Q ss_pred -------CCEEEEEECCCeEEEEEcCCce----eeeee--c-CCceEEEEecCC---Cc----------cccCCCCCc--
Q 046394 162 -------GHLMATSGKDCKIKIWDLRKYE----VLQTL--P-GHAKTLDFSRKD---SG----------DFSGSHNYN-- 212 (378)
Q Consensus 162 -------g~~l~t~~~d~~i~iwd~~~~~----~~~~~--~-~~i~~~~~sp~g---~~----------~~~~~~~~~-- 212 (378)
+++|++++.|++|+|||++++. +..++ | ..|.+++|+|++ .+ .+|+.....
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~ 242 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP 242 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc
Confidence 5799999999999999998765 45556 3 679999999985 32 566544321
Q ss_pred -eEEEe--eccCCcceeeeEEcCCCCeEEEecCCCeEEEEEc
Q 046394 213 -RYMGY--SMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIP 251 (378)
Q Consensus 213 -~~~~~--~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~ 251 (378)
..... .. |...|.+++|+|+|.+||+++.||.+.+|-.
T Consensus 243 ~~~~~~~~~~-~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 243 WKKTLLKEEK-FPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp CEEEESSSSC-CSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred cceeeeeccc-CCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 11112 23 6678999999999999998888887777653
No 34
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-30 Score=230.14 Aligned_cols=235 Identities=14% Similarity=0.114 Sum_probs=198.8
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCeeEEEE
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEVLKLQF 93 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~~~l~~ 93 (378)
....+....++.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++|| .++..+..+.....+.++.|
T Consensus 44 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~ 123 (369)
T 3zwl_B 44 GDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEF 123 (369)
T ss_dssp SCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEE
T ss_pred CCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEE
Confidence 34456667789999999999999999999999999999999999999999999999999 45677777774444599999
Q ss_pred -----EEEEEeCC-----CeEEEEEcCCCc-----------EEEEEecCCC--CeeEEEEcCCCCEEEEEcCCCe-----
Q 046394 94 -----LLASINKL-----GQLRYQNVTMGE-----------IVGNFWTGLG--RTDVIRVNPFNGVVSLGHSGGT----- 145 (378)
Q Consensus 94 -----~l~s~~~d-----~~i~iwd~~~~~-----------~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~d~~----- 145 (378)
++++++.+ +.|.+||+..+. .+..+..+.. .+.+++|+|++.+|++++.++.
T Consensus 124 ~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d 203 (369)
T 3zwl_B 124 SPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYD 203 (369)
T ss_dssp CTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEE
T ss_pred ccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEE
Confidence 88888888 999999997653 3344445555 8999999999999999999987
Q ss_pred ----------eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--cCCceEEEEecCCCc----------
Q 046394 146 ----------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSG---------- 203 (378)
Q Consensus 146 ----------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~---------- 203 (378)
+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+ ...+.+++|+|++.+
T Consensus 204 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 283 (369)
T 3zwl_B 204 VSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAK 283 (369)
T ss_dssp TTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC--
T ss_pred CCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCc
Confidence 5678999999999999999999999999999999999998888 578999999998875
Q ss_pred --------------cccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEE
Q 046394 204 --------------DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 204 --------------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~ 250 (378)
.+|+.....++..+.+ |...|++++|+|+|.+|++++.||.+.+|.
T Consensus 284 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 343 (369)
T 3zwl_B 284 DVTTTSANEGKFEARFYHKIFEEEIGRVQG-HFGPLNTVAISPQGTSYASGGEDGFIRLHH 343 (369)
T ss_dssp -----------CEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eEEEEecCCCcceeEEEecCCCcchhheec-ccCcEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 3455556666777777 888999999999998888887777554443
No 35
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.6e-32 Score=241.80 Aligned_cols=225 Identities=12% Similarity=0.128 Sum_probs=163.3
Q ss_pred EEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeC------CCcEEEEe-CCCCeE----EeeccCCC-
Q 046394 20 RIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGC------KGYPYFYN-RDGTEL----HCSKEHGE- 87 (378)
Q Consensus 20 ~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~------dg~i~iwd-~~~~~~----~~~~~~~~- 87 (378)
....+.....|++... ...+|...|.+++|||||++||+|+. |+.|++|+ .++... .....|..
T Consensus 21 ~~~g~~~~~~w~~p~~----~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~ 96 (357)
T 4g56_B 21 QSNGSSKGSAWGRPVT----APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAG 96 (357)
T ss_dssp -----------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSC
T ss_pred ecCCCccccccCCCCC----CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCC
Confidence 3334455677876433 33579999999999999999999997 67899998 343322 22334544
Q ss_pred eeEEEE----EEEEEeCCCeEEEEEcCCCcEEE----EEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------
Q 046394 88 VLKLQF----LLASINKLGQLRYQNVTMGEIVG----NFWTGLGRTDVIRVNPFNGVVSLGHSGGT-------------- 145 (378)
Q Consensus 88 ~~~l~~----~l~s~~~d~~i~iwd~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-------------- 145 (378)
+.+++| .+++++.||+|+|||+.+++... ....|...|.+++|+|++++|++++.|+.
T Consensus 97 V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~ 176 (357)
T 4g56_B 97 VTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKS 176 (357)
T ss_dssp EEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 599999 77788999999999998876543 33468899999999999999999999997
Q ss_pred eeecCCCEEEEEEecCCC-EEEEEECCCeEEEEEcCCceeeeee-----cCCceEEEEecCCCc-----------cccCC
Q 046394 146 MLCHQGPVSALAFHPNGH-LMATSGKDCKIKIWDLRKYEVLQTL-----PGHAKTLDFSRKDSG-----------DFSGS 208 (378)
Q Consensus 146 ~~~h~~~v~~~~~sp~g~-~l~t~~~d~~i~iwd~~~~~~~~~~-----~~~i~~~~~sp~g~~-----------~~~~~ 208 (378)
+.+|...|++++|+|++. ++++++.|++|+|||+++++++..+ ...+.+++|+|++.. .+|+.
T Consensus 177 ~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~ 256 (357)
T 4g56_B 177 YNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNI 256 (357)
T ss_dssp ECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEES
T ss_pred EcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEEC
Confidence 668999999999999874 7899999999999999998887655 356899999997542 66777
Q ss_pred CCCceEEEeeccCCcceeeeEEcCCC-CeEEEecCCCeEEEE
Q 046394 209 HNYNRYMGYSMVKGYQIGKVSFRPYE-DVLGIGHSMGVSGIL 249 (378)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~sp~g-~~l~~~~~~g~~~~~ 249 (378)
....++..+.+ |...|++++|+|++ .+||+|+.||.+.+|
T Consensus 257 ~~~~~~~~~~~-~~~~v~~l~~sp~~~~~lasgs~D~~i~iw 297 (357)
T 4g56_B 257 KNPDSAQTSAV-HSQNITGLAYSYHSSPFLASISEDCTVAVL 297 (357)
T ss_dssp SCGGGCEEECC-CSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred CCCcEeEEEec-cceeEEEEEEcCCCCCEEEEEeCCCEEEEE
Confidence 77777888877 88899999999998 578888888866655
No 36
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.98 E-value=9.1e-31 Score=241.89 Aligned_cols=223 Identities=14% Similarity=0.135 Sum_probs=176.0
Q ss_pred eEEEeccceeeeeeccccee--eEEeecCCCCceEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEeeccCCC----eeE
Q 046394 18 TWRIKQEAIAREVDILSSRN--QYDIMLPELGPYTLDFTS-SGRYMAAAGCKGYPYFYNRDGTELHCSKEHGE----VLK 90 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~~~~--~~~l~~~~~~v~~~~~sp-~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~~ 90 (378)
.+....|+.|++||+.++.. ...+.+|.+.|++|+|+| ++.+|++|+.||+|++||+.+..+..+..+.. +.+
T Consensus 135 lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 214 (435)
T 4e54_B 135 VAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCS 214 (435)
T ss_dssp EEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCC
T ss_pred EEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEE
Confidence 44566789999999987754 345568999999999998 68999999999999999988777766554432 267
Q ss_pred EEE-----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCC-EEEEEcCCCe-----------------ee
Q 046394 91 LQF-----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNG-VVSLGHSGGT-----------------ML 147 (378)
Q Consensus 91 l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~-----------------~~ 147 (378)
++| +|++|+.||.|++||+. ++.+..+..|...|.+++|+|++. +|++++.|+. ..
T Consensus 215 ~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~ 293 (435)
T 4e54_B 215 LDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSL 293 (435)
T ss_dssp EEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCC
T ss_pred EEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEee
Confidence 888 99999999999999985 556677888999999999999986 7888998887 35
Q ss_pred ecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--c-------CCc-----------eEEEEecCCCc----
Q 046394 148 CHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--P-------GHA-----------KTLDFSRKDSG---- 203 (378)
Q Consensus 148 ~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~-------~~i-----------~~~~~sp~g~~---- 203 (378)
+|...|++++|+|+|++|++++.|++|+|||+.++.+...+ + ..+ ..+.+++++..
T Consensus 294 ~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 373 (435)
T 4e54_B 294 PHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCT 373 (435)
T ss_dssp BCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSS
T ss_pred eccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEE
Confidence 78999999999999999999999999999999988776554 1 112 23334444432
Q ss_pred -------cccCCCCCceEEEeeccCCcceeee-EEcCCCCeEEEec
Q 046394 204 -------DFSGSHNYNRYMGYSMVKGYQIGKV-SFRPYEDVLGIGH 241 (378)
Q Consensus 204 -------~~~~~~~~~~~~~~~~~~~~~v~~~-~~sp~g~~l~~~~ 241 (378)
.+|+..++..+..+..+|...|.++ +|+|+|.+|++|+
T Consensus 374 ~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~ 419 (435)
T 4e54_B 374 PYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM 419 (435)
T ss_dssp TTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC
T ss_pred ecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc
Confidence 4566666666666554477888887 6999998777664
No 37
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.98 E-value=8.4e-30 Score=227.96 Aligned_cols=212 Identities=13% Similarity=0.112 Sum_probs=175.2
Q ss_pred eeeEEeecCCCCceEEEE-----cC-CCCEEEEEeCCCcEEEEeCC--------CCeEEeeccCCCe-eEEEE-----EE
Q 046394 36 RNQYDIMLPELGPYTLDF-----TS-SGRYMAAAGCKGYPYFYNRD--------GTELHCSKEHGEV-LKLQF-----LL 95 (378)
Q Consensus 36 ~~~~~l~~~~~~v~~~~~-----sp-~g~~l~~~~~dg~i~iwd~~--------~~~~~~~~~~~~~-~~l~~-----~l 95 (378)
.....+.+|...|++++| +| ++.+|++|+.|++|++||.. +.+...+.+|... .+++| ++
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 446678999999999999 77 89999999999999999953 2356778899876 99999 89
Q ss_pred EEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe----------------eeecCCCEEEEEEe
Q 046394 96 ASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT----------------MLCHQGPVSALAFH 159 (378)
Q Consensus 96 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~----------------~~~h~~~v~~~~~s 159 (378)
++++.|++|++||+.+++.+..+..|...|.+++|+|++.+|++++.|+. ..+|...|.+++|+
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~ 171 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYS 171 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEEC
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeec
Confidence 99999999999999999999999999999999999999999999999987 11688899999999
Q ss_pred cCC----------CEEEEEECCCeEEEEEcCCceeeeee---cCCceEEEEecCCCc----------cccCCC-CCceEE
Q 046394 160 PNG----------HLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSG----------DFSGSH-NYNRYM 215 (378)
Q Consensus 160 p~g----------~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g~~----------~~~~~~-~~~~~~ 215 (378)
|++ .+|++++.|++|++||. .+.....+ ...|.+++|+|+|.+ .+|+.. ...+..
T Consensus 172 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~ 250 (343)
T 2xzm_R 172 PIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQR 250 (343)
T ss_dssp CCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSE
T ss_pred cccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccce
Confidence 987 79999999999999994 45666666 478999999999885 556652 222333
Q ss_pred EeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEEc
Q 046394 216 GYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIP 251 (378)
Q Consensus 216 ~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~ 251 (378)
.+. +...|.+++|+|++.+|+++.++ .+.+|..
T Consensus 251 ~~~--~~~~v~~v~~sp~~~~la~~~d~-~v~iw~~ 283 (343)
T 2xzm_R 251 EFD--AGSTINQIAFNPKLQWVAVGTDQ-GVKIFNL 283 (343)
T ss_dssp EEE--CSSCEEEEEECSSSCEEEEEESS-CEEEEES
T ss_pred eec--CCCcEEEEEECCCCCEEEEECCC-CEEEEEe
Confidence 332 45569999999999888776544 4566654
No 38
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.1e-29 Score=219.27 Aligned_cols=229 Identities=15% Similarity=0.037 Sum_probs=198.1
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCC----CCeEEeeccCCCe-e
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRD----GTELHCSKEHGEV-L 89 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~----~~~~~~~~~~~~~-~ 89 (378)
....+....++.|++||+.++.....+..|...|.+++|+|++.+|++|+.||.|++|++. +..+..+.+|... .
T Consensus 29 ~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~ 108 (313)
T 3odt_A 29 DSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVC 108 (313)
T ss_dssp TTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEE
T ss_pred CCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEE
Confidence 3456777889999999999999999999999999999999999999999999999999942 3456778888876 9
Q ss_pred EEEE---EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcC-CCCEEEEEcCCCe------------eee-cCCC
Q 046394 90 KLQF---LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNP-FNGVVSLGHSGGT------------MLC-HQGP 152 (378)
Q Consensus 90 ~l~~---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~------------~~~-h~~~ 152 (378)
++.| ++++++.|+.|++|| .+..+..+..|...+.+++|+| ++..+++++.++. +.. |...
T Consensus 109 ~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 186 (313)
T 3odt_A 109 SLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDV 186 (313)
T ss_dssp EEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSC
T ss_pred EEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCccc
Confidence 9999 999999999999999 7788888999999999999998 8999999999987 334 8899
Q ss_pred EEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee---cCCceEEEEecCCCc---------cccCCCCCceEEEeecc
Q 046394 153 VSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSG---------DFSGSHNYNRYMGYSMV 220 (378)
Q Consensus 153 v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g~~---------~~~~~~~~~~~~~~~~~ 220 (378)
|.+++|+|++. +++++.|+.|++||+++++++..+ ...+++++|+|+|.+ .+|+.....++..+..
T Consensus 187 i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~- 264 (313)
T 3odt_A 187 VRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITL- 264 (313)
T ss_dssp EEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEEC-
T ss_pred EEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEec-
Confidence 99999999998 999999999999999999998888 478999999998753 7888888888888887
Q ss_pred CCcceeeeEEcCCCCeEEEecCCCeEEE
Q 046394 221 KGYQIGKVSFRPYEDVLGIGHSMGVSGI 248 (378)
Q Consensus 221 ~~~~v~~~~~sp~g~~l~~~~~~g~~~~ 248 (378)
|..+|.+++|+|++. +++++.||.+.+
T Consensus 265 ~~~~i~~~~~~~~~~-~~~~~~dg~i~i 291 (313)
T 3odt_A 265 PAISIWSVDCMSNGD-IIVGSSDNLVRI 291 (313)
T ss_dssp SSSCEEEEEECTTSC-EEEEETTSCEEE
T ss_pred cCceEEEEEEccCCC-EEEEeCCCcEEE
Confidence 888999999999996 334555553333
No 39
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=8e-29 Score=220.20 Aligned_cols=230 Identities=10% Similarity=0.037 Sum_probs=192.6
Q ss_pred eEEEeccceeeeeeccccee---eEEee--cCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC-C--eEEeeccCCCe-
Q 046394 18 TWRIKQEAIAREVDILSSRN---QYDIM--LPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG-T--ELHCSKEHGEV- 88 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~~~~---~~~l~--~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~-~--~~~~~~~~~~~- 88 (378)
.+....++.+++||+.++.. ...+. .|...|.+++|+|++++|++++.||.|++||... . ....+..|...
T Consensus 65 ~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i 144 (337)
T 1gxr_A 65 HVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPAC 144 (337)
T ss_dssp EEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCE
T ss_pred EEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCce
Confidence 33344489999999987753 33333 7888999999999999999999999999999544 3 45667777765
Q ss_pred eEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe-------------eeecC
Q 046394 89 LKLQF-----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT-------------MLCHQ 150 (378)
Q Consensus 89 ~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-------------~~~h~ 150 (378)
.+++| ++++++.|+.|++||+.+++.+..+..|...+.+++|+|++.+|++++.++. ...|.
T Consensus 145 ~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~ 224 (337)
T 1gxr_A 145 YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT 224 (337)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC
Confidence 89999 8999999999999999999999999999999999999999999999999988 34578
Q ss_pred CCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--cCCceEEEEecCCCc----------cccCCCCCceEEEee
Q 046394 151 GPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSG----------DFSGSHNYNRYMGYS 218 (378)
Q Consensus 151 ~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~ 218 (378)
..+.+++|+|++++|++++.|+.|++||+.++...... ...+.+++|+|+|.+ .+|+......+...
T Consensus 225 ~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~- 303 (337)
T 1gxr_A 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS- 303 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-
Confidence 89999999999999999999999999999988765444 478999999998875 56666666665433
Q ss_pred ccCCcceeeeEEcCCCCeEEEecCCCeEEEE
Q 046394 219 MVKGYQIGKVSFRPYEDVLGIGHSMGVSGIL 249 (378)
Q Consensus 219 ~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~ 249 (378)
. |...|.++.|+|++.+|++++.||.+.+|
T Consensus 304 ~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 333 (337)
T 1gxr_A 304 K-ESSSVLSCDISVDDKYIVTGSGDKKATVY 333 (337)
T ss_dssp E-CSSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred c-CCCcEEEEEECCCCCEEEEecCCCeEEEE
Confidence 2 67889999999999888888888766555
No 40
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=3.1e-29 Score=227.54 Aligned_cols=233 Identities=13% Similarity=0.058 Sum_probs=193.4
Q ss_pred eeeEEEeccceeeeeecccceeeEEee--cCCCCceEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEeeccCC---C-e
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIM--LPELGPYTLDFTS-SGRYMAAAGCKGYPYFYNRDGTELHCSKEHG---E-V 88 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~--~~~~~v~~~~~sp-~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~-~ 88 (378)
...+....++.|++||+.++.....+. +|...|.+++|+| ++.+|++++.||.|++||..+..+..+..+. . +
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v 166 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWY 166 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCE
T ss_pred CEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCe
Confidence 456677788999999999888777665 6999999999999 7799999999999999998888887776654 3 4
Q ss_pred eEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCC-EEEEEcCCCe-----------------
Q 046394 89 LKLQF-----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNG-VVSLGHSGGT----------------- 145 (378)
Q Consensus 89 ~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~----------------- 145 (378)
.+++| +|++++.|+.|++||+ +++.+..+..|...|.+++|+|++. +|++++.|+.
T Consensus 167 ~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 245 (383)
T 3ei3_B 167 CCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIA 245 (383)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEE
T ss_pred EEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEE
Confidence 88999 9999999999999999 6888899999999999999999998 9999999987
Q ss_pred eeecCCCEEEEEEec-CCCEEEEEECCCeEEEEEcCCceeeeee--c------------------CCceEEEEecC----
Q 046394 146 MLCHQGPVSALAFHP-NGHLMATSGKDCKIKIWDLRKYEVLQTL--P------------------GHAKTLDFSRK---- 200 (378)
Q Consensus 146 ~~~h~~~v~~~~~sp-~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~------------------~~i~~~~~sp~---- 200 (378)
..+|...|.+++|+| +|.+|++++.|+.|++||++++..+..+ + ..+..++|+|+
T Consensus 246 ~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s 325 (383)
T 3ei3_B 246 EMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLL 325 (383)
T ss_dssp EEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTC
T ss_pred EecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcccc
Confidence 347899999999999 9999999999999999999987775554 1 22344667664
Q ss_pred ----CCccccCCCCCceEEEeecc-CCcceeeeEEcCCCCeEEEecCCCeEEEEE
Q 046394 201 ----DSGDFSGSHNYNRYMGYSMV-KGYQIGKVSFRPYEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 201 ----g~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~ 250 (378)
|...+|+..+...+..+.++ +...+..++|+|+|.+|++|+ ||.+.+|-
T Consensus 326 ~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~ 379 (383)
T 3ei3_B 326 LNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWN 379 (383)
T ss_dssp TTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEE
T ss_pred cCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEe
Confidence 44578888788887777652 356677779999998888775 66555543
No 41
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=2.2e-29 Score=229.51 Aligned_cols=207 Identities=15% Similarity=0.163 Sum_probs=172.9
Q ss_pred cCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCC-------------------eeEEEE-----EEEE
Q 046394 43 LPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGE-------------------VLKLQF-----LLAS 97 (378)
Q Consensus 43 ~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~-------------------~~~l~~-----~l~s 97 (378)
.|...|.+++|||+|++||+|+ ++.+++|+ .++..+..+..+.. +.+++| +|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6899999999999999999986 68999999 56677666655431 478889 9999
Q ss_pred EeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe-------------eeecCCCEEEEEEec-CCC
Q 046394 98 INKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT-------------MLCHQGPVSALAFHP-NGH 163 (378)
Q Consensus 98 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-------------~~~h~~~v~~~~~sp-~g~ 163 (378)
|+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|+. ...+...+.+++|+| +++
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~ 220 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGK 220 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCC
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCC
Confidence 999999999999999999999999999999999999999999999998 234677899999999 899
Q ss_pred EEEEEECCCeEEEEEcCCceeeeee----------cCCceEEEEecCCCc----------cccCCCC------------C
Q 046394 164 LMATSGKDCKIKIWDLRKYEVLQTL----------PGHAKTLDFSRKDSG----------DFSGSHN------------Y 211 (378)
Q Consensus 164 ~l~t~~~d~~i~iwd~~~~~~~~~~----------~~~i~~~~~sp~g~~----------~~~~~~~------------~ 211 (378)
+|++++.|+.|++||++++.++..+ ...|.+++|+|+|.+ .+|+... .
T Consensus 221 ~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~ 300 (393)
T 1erj_A 221 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 300 (393)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------
T ss_pred EEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCC
Confidence 9999999999999999998877655 256899999999875 4555432 2
Q ss_pred ceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEEc
Q 046394 212 NRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIP 251 (378)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~ 251 (378)
.....+.+ |...|.+++|+|++.+|++|+.||.+.+|..
T Consensus 301 ~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 301 TCEVTYIG-HKDFVLSVATTQNDEYILSGSKDRGVLFWDK 339 (393)
T ss_dssp CEEEEEEC-CSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred cceEEEec-ccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 23445556 8888999999999999999999997765543
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=5.8e-31 Score=238.31 Aligned_cols=210 Identities=10% Similarity=0.121 Sum_probs=173.8
Q ss_pred eecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCC-C--CeEEeeccCCCe-eEEEE-----EEEEEeCCCeEEEEEcCC
Q 046394 41 IMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRD-G--TELHCSKEHGEV-LKLQF-----LLASINKLGQLRYQNVTM 111 (378)
Q Consensus 41 l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~-~--~~~~~~~~~~~~-~~l~~-----~l~s~~~d~~i~iwd~~~ 111 (378)
+..+...|++++|+|+|++|++|+.||.|+|||.. + ..+..+.+|... .+++| +|++++.|++|++||+.+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 44566799999999999999999999999999954 4 566778888876 99999 899999999999999998
Q ss_pred Cc---EEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe-----------------eee-cCCCEEEEEEecCCCEEEEEEC
Q 046394 112 GE---IVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT-----------------MLC-HQGPVSALAFHPNGHLMATSGK 170 (378)
Q Consensus 112 ~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-----------------~~~-h~~~v~~~~~sp~g~~l~t~~~ 170 (378)
+. ....+..|...|.+++|+|++.+|++++.|+. +.. |...|.+++|+|++++|++++.
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 77 67777789999999999999999999999887 334 8999999999999999999999
Q ss_pred CCeEEEEEcC------------------Cceeeeee--cCCceEEEEecCCCc----------cccCCCCCce----EEE
Q 046394 171 DCKIKIWDLR------------------KYEVLQTL--PGHAKTLDFSRKDSG----------DFSGSHNYNR----YMG 216 (378)
Q Consensus 171 d~~i~iwd~~------------------~~~~~~~~--~~~i~~~~~sp~g~~----------~~~~~~~~~~----~~~ 216 (378)
|++|++||+. .++++..+ ...+.+++|+|+|.+ .+|+...... +..
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 246 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALIT 246 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCC
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEe
Confidence 9999999995 34555555 467999999999875 6777666665 666
Q ss_pred eeccCCcceeeeEEcCCCCeEEEecCCCeEEEEEc
Q 046394 217 YSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIP 251 (378)
Q Consensus 217 ~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~ 251 (378)
+.+ |..+|.+++|+|+|.+|++|+.++.+.++..
T Consensus 247 ~~~-~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 247 VKL-SQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp EEC-SSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred ecC-CCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 777 8889999999999999999998887754443
No 43
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=1.1e-28 Score=217.67 Aligned_cols=232 Identities=13% Similarity=0.134 Sum_probs=195.0
Q ss_pred eeEEEeccceeeeeecccceeeEEee--cCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEE
Q 046394 17 KTWRIKQEAIAREVDILSSRNQYDIM--LPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQ 92 (378)
Q Consensus 17 ~~~~~~~~~~i~~~d~~~~~~~~~l~--~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~ 92 (378)
..+.+..|+.|++||+.+++.+..+. .|...|.+++|+|+|++|++|+.||.|++|| .++..+..+.+|... .++.
T Consensus 37 ~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~ 116 (318)
T 4ggc_A 37 NVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLS 116 (318)
T ss_dssp SEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred CEEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEee
Confidence 35667779999999999998877665 5677899999999999999999999999999 567788889999876 7777
Q ss_pred E---EEEEEeCCCeEEEEEcCCC-cEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe------------------eeecC
Q 046394 93 F---LLASINKLGQLRYQNVTMG-EIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT------------------MLCHQ 150 (378)
Q Consensus 93 ~---~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~------------------~~~h~ 150 (378)
+ .+++++.++.+.+|+.... ..+..+..|...+..+.+++++.+|++++.|+. ...|.
T Consensus 117 ~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 196 (318)
T 4ggc_A 117 WNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQ 196 (318)
T ss_dssp EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCC
T ss_pred cCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccC
Confidence 7 9999999999999999875 466778889999999999999999999999987 34567
Q ss_pred CCEEEEEEecCCCE-E--EEEECCCeEEEEEcCCceeeeee--cCCceEEEEecCCC------------ccccCCCCCce
Q 046394 151 GPVSALAFHPNGHL-M--ATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDS------------GDFSGSHNYNR 213 (378)
Q Consensus 151 ~~v~~~~~sp~g~~-l--~t~~~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~------------~~~~~~~~~~~ 213 (378)
+.|.+++++|++.. + ++++.+++|++||.......... ...+..+.|+|++. ..+|+..+..+
T Consensus 197 ~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~ 276 (318)
T 4ggc_A 197 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK 276 (318)
T ss_dssp SCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE
T ss_pred CceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcE
Confidence 88999999996543 3 35667899999999988877666 56778888877654 47788888889
Q ss_pred EEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEE
Q 046394 214 YMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGIL 249 (378)
Q Consensus 214 ~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~ 249 (378)
+..+.+ |..+|++++|+|+|.+|++|+.||.+.+|
T Consensus 277 ~~~l~g-H~~~V~~l~~spdg~~l~S~s~D~~v~iW 311 (318)
T 4ggc_A 277 VAELKG-HTSRVLSLTMSPDGATVASAAADETLRLW 311 (318)
T ss_dssp EEEECC-CSSCEEEEEECTTSSCEEEEETTTEEEEE
T ss_pred EEEEcC-CCCCEEEEEEcCCCCEEEEEecCCeEEEE
Confidence 999988 99999999999999888777777654444
No 44
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.8e-29 Score=230.29 Aligned_cols=232 Identities=13% Similarity=0.135 Sum_probs=194.7
Q ss_pred eeEEEeccceeeeeec----ccce------eeEEeec----------CCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 046394 17 KTWRIKQEAIAREVDI----LSSR------NQYDIML----------PELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG 76 (378)
Q Consensus 17 ~~~~~~~~~~i~~~d~----~~~~------~~~~l~~----------~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~ 76 (378)
..+....++.+++||+ .+++ ....+.. |...|.+++|+|++++|++|+.||.|++||.++
T Consensus 60 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~ 139 (425)
T 1r5m_A 60 ILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTG 139 (425)
T ss_dssp EEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEETTS
T ss_pred EEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 5566677899999999 8887 4555555 677999999999999999999999999999989
Q ss_pred CeEEeeccCCCe-eEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCC---------------eeEEEEcCCCC
Q 046394 77 TELHCSKEHGEV-LKLQF-----LLASINKLGQLRYQNVTMGEIVGNFWTGLGR---------------TDVIRVNPFNG 135 (378)
Q Consensus 77 ~~~~~~~~~~~~-~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~---------------v~~~~~s~~~~ 135 (378)
..+..+..|... .+++| +|++++.|+.|++||+.+++.+..+..+... +.+++|+|++.
T Consensus 140 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (425)
T 1r5m_A 140 ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK 219 (425)
T ss_dssp CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE
T ss_pred CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE
Confidence 999999999876 99999 8999999999999999999999988877766 99999999865
Q ss_pred EEEEEcCCCe--------------eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee---cCCceEEEEe
Q 046394 136 VVSLGHSGGT--------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFS 198 (378)
Q Consensus 136 ~l~~~~~d~~--------------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~s 198 (378)
+++++.++. +..|...|.+++|+|++++|++++.|+.|++||+++++++..+ ...+.+++|+
T Consensus 220 -~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 298 (425)
T 1r5m_A 220 -FVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWV 298 (425)
T ss_dssp -EEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEE
T ss_pred -EEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEEC
Confidence 667776665 5578999999999999999999999999999999999888887 4789999999
Q ss_pred cCCC---------ccccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEE
Q 046394 199 RKDS---------GDFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 199 p~g~---------~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~ 250 (378)
|++. ..+|+......+..+.. |..+|.+++|+|++.+|++++.+|.+.+|.
T Consensus 299 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~ 358 (425)
T 1r5m_A 299 GDDKVISCSMDGSVRLWSLKQNTLLALSIV-DGVPIFAGRISQDGQKYAVAFMDGQVNVYD 358 (425)
T ss_dssp TTTEEEEEETTSEEEEEETTTTEEEEEEEC-TTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEeEeccc-CCccEEEEEEcCCCCEEEEEECCCeEEEEE
Confidence 9873 26777777778877777 888999999999999988888887666654
No 45
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-28 Score=221.50 Aligned_cols=227 Identities=11% Similarity=0.186 Sum_probs=186.4
Q ss_pred ceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEEE-----EEEEEeCCCeEEEE
Q 046394 35 SRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQF-----LLASINKLGQLRYQ 107 (378)
Q Consensus 35 ~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~~-----~l~s~~~d~~i~iw 107 (378)
......+.+|...|.+++|+|+|++|++|+.||.|++|| .++..+..+.+|... .+++| +|++++.|+.|++|
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 101 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLW 101 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 345677899999999999999999999999999999999 577888899999876 99999 99999999999999
Q ss_pred EcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCC-----Ce-------------------------eeecCC--CEEE
Q 046394 108 NVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSG-----GT-------------------------MLCHQG--PVSA 155 (378)
Q Consensus 108 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~-------------------------~~~h~~--~v~~ 155 (378)
|+.+++.+..+. +...+.+++|+|++.++++++.+ +. +..|.+ .+.+
T Consensus 102 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 102 DVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp ETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred ECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 999999998887 78899999999999999999888 55 333444 8999
Q ss_pred EEEecCCCEEEEEECCCeEEEEEcCC-ceeeeee---cCCceEEEEecCCCc----------cccCCCCCceEEEeeccC
Q 046394 156 LAFHPNGHLMATSGKDCKIKIWDLRK-YEVLQTL---PGHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSMVK 221 (378)
Q Consensus 156 ~~~sp~g~~l~t~~~d~~i~iwd~~~-~~~~~~~---~~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~~~ 221 (378)
++|+|++++|++++.||.|++||+++ +..+..+ ...+.+++|+|++.+ .+|+......+..+. +
T Consensus 181 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~ 258 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE--T 258 (369)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--C
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec--C
Confidence 99999999999999999999999998 7777777 478999999998875 567777777666665 4
Q ss_pred CcceeeeEEcCCCCeEEEecCCCeEEEEEcCCCCc--ccccccCC
Q 046394 222 GYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGEP--NFDSWVAN 264 (378)
Q Consensus 222 ~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~~s~d~--~i~~w~~~ 264 (378)
...+..+.|+|++.++++++.++...++.....++ .+++|+..
T Consensus 259 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 303 (369)
T 3zwl_B 259 DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI 303 (369)
T ss_dssp SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence 67799999999999999999887544444333322 45566543
No 46
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=1.9e-29 Score=226.84 Aligned_cols=234 Identities=17% Similarity=0.108 Sum_probs=193.6
Q ss_pred CceeeEEEeccceeeeeecccceeeEEeec-----CCCCceEEEEcCC----CCEEEEEeCCCcEEEEe-CCCCeEEeec
Q 046394 14 GVEKTWRIKQEAIAREVDILSSRNQYDIML-----PELGPYTLDFTSS----GRYMAAAGCKGYPYFYN-RDGTELHCSK 83 (378)
Q Consensus 14 ~~~~~~~~~~~~~i~~~d~~~~~~~~~l~~-----~~~~v~~~~~sp~----g~~l~~~~~dg~i~iwd-~~~~~~~~~~ 83 (378)
+....+....++.|++||+.++..+..+.. |...|++++|+|+ |.+|++|+.||.|++|| .++..+..+.
T Consensus 33 ~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 112 (366)
T 3k26_A 33 GDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV 112 (366)
T ss_dssp TSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE
T ss_pred CCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec
Confidence 344466666678999999998887766664 5577999999999 67999999999999999 5677888899
Q ss_pred cCCCe-eEEEE------EEEEEeCCCeEEEEEcCCCcEEEEE---ecCCCCeeEEEEcCCCCEEEEEcCCCe--------
Q 046394 84 EHGEV-LKLQF------LLASINKLGQLRYQNVTMGEIVGNF---WTGLGRTDVIRVNPFNGVVSLGHSGGT-------- 145 (378)
Q Consensus 84 ~~~~~-~~l~~------~l~s~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~d~~-------- 145 (378)
+|... .+++| +|++++.|+.|++||+.+++.+..+ ..|...|.+++|+|++.+|++++.|+.
T Consensus 113 ~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 113 GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCS
T ss_pred CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCC
Confidence 88876 99999 8999999999999999999998888 678899999999999999999999987
Q ss_pred ------eee----------------------------cCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCcee-------
Q 046394 146 ------MLC----------------------------HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEV------- 184 (378)
Q Consensus 146 ------~~~----------------------------h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~------- 184 (378)
+.. |...|.+++|+ +++|++++.|+.|++||+.++..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 270 (366)
T 3k26_A 193 KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKP 270 (366)
T ss_dssp HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCT
T ss_pred CccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCcccccccccc
Confidence 111 89999999999 77999999999999999987643
Q ss_pred -------eeee---cCCceEEEEecC--CCc----------cccCCCCCc----eEEEeeccC--CcceeeeEEcCCCCe
Q 046394 185 -------LQTL---PGHAKTLDFSRK--DSG----------DFSGSHNYN----RYMGYSMVK--GYQIGKVSFRPYEDV 236 (378)
Q Consensus 185 -------~~~~---~~~i~~~~~sp~--g~~----------~~~~~~~~~----~~~~~~~~~--~~~v~~~~~sp~g~~ 236 (378)
+..+ ...+++++|+|+ |.+ .+|+..... ....+.. | ...|++++|+|++.+
T Consensus 271 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~ 349 (366)
T 3k26_A 271 SESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTH-HKCGAAIRQTSFSRDSSI 349 (366)
T ss_dssp TCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECC-TTCCSCEEEEEECTTSSE
T ss_pred CCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcc-cccCCceEEEEeCCCCCe
Confidence 4555 367899999998 664 566665543 2334555 4 688999999999998
Q ss_pred EEEecCCCeEEEEE
Q 046394 237 LGIGHSMGVSGILI 250 (378)
Q Consensus 237 l~~~~~~g~~~~~~ 250 (378)
|++++.||.+.+|.
T Consensus 350 l~s~~~dg~i~iwd 363 (366)
T 3k26_A 350 LIAVCDDASIWRWD 363 (366)
T ss_dssp EEEEETTSEEEEEE
T ss_pred EEEEeCCCEEEEEE
Confidence 88888888665553
No 47
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.2e-29 Score=229.85 Aligned_cols=232 Identities=11% Similarity=0.137 Sum_probs=198.4
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeC-CCCeEEeeccCCC------
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNR-DGTELHCSKEHGE------ 87 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~-~~~~~~~~~~~~~------ 87 (378)
....+....++.|++|| .++..+..+..|...|.+++|+|++++|++++.||.|++||. ++..+..+..+..
T Consensus 120 ~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 198 (425)
T 1r5m_A 120 GNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSIN 198 (425)
T ss_dssp SSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------
T ss_pred CCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcccee
Confidence 34456667789999999 678888899999999999999999999999999999999995 5666677666553
Q ss_pred ----------eeEEEE----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------
Q 046394 88 ----------VLKLQF----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT-------- 145 (378)
Q Consensus 88 ----------~~~l~~----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-------- 145 (378)
+.++.| .+++++.|+.|++||+.+++.+..+..|...+.+++|+|++.+|++++.++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 278 (425)
T 1r5m_A 199 AENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGN 278 (425)
T ss_dssp -------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSS
T ss_pred eccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 566777 8999999999999999999998899899999999999999999999999887
Q ss_pred ------eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee---cCCceEEEEecCCCc----------ccc
Q 046394 146 ------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSG----------DFS 206 (378)
Q Consensus 146 ------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g~~----------~~~ 206 (378)
+..|...|.+++|+|++ ++++++.|+.|++||+.+++++..+ ...+.+++|+|+|.+ .+|
T Consensus 279 ~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~ 357 (425)
T 1r5m_A 279 GNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVY 357 (425)
T ss_dssp BSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEE
Confidence 55689999999999999 9999999999999999999998887 468999999998874 566
Q ss_pred CCCCCc--------------------eEEEeeccCCc--ceeeeEEcCCCCeEEEecCCCeEEEE
Q 046394 207 GSHNYN--------------------RYMGYSMVKGY--QIGKVSFRPYEDVLGIGHSMGVSGIL 249 (378)
Q Consensus 207 ~~~~~~--------------------~~~~~~~~~~~--~v~~~~~sp~g~~l~~~~~~g~~~~~ 249 (378)
+..... ++..+.. |.. .|++++|+|++.+|++++.||.+.+|
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 421 (425)
T 1r5m_A 358 DLKKLNSKSRSLYGNRDGILNPLPIPLYASYQS-SQDNDYIFDLSWNCAGNKISVAYSLQEGSVV 421 (425)
T ss_dssp ECHHHHC--------------CEECCEEEEECC-TTCCCCEEEEEECTTSSEEEEEESSSCCEEE
T ss_pred ECCCCccceeeeecccccccCcccchhhhhhcC-cccCCceEEEEccCCCceEEEEecCceEEEE
Confidence 665555 6777777 644 89999999999888888877755554
No 48
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=2.5e-28 Score=220.23 Aligned_cols=233 Identities=11% Similarity=0.025 Sum_probs=186.4
Q ss_pred eeeEEEeccceeeeeecccce--eeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-E--EeeccCCCe-e
Q 046394 16 EKTWRIKQEAIAREVDILSSR--NQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTE-L--HCSKEHGEV-L 89 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~--~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~-~--~~~~~~~~~-~ 89 (378)
...+....++.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.||.|++||..... . ..+..|... .
T Consensus 21 ~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~ 100 (372)
T 1k8k_C 21 TQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAAR 100 (372)
T ss_dssp SEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEE
T ss_pred CEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCcee
Confidence 344555578999999999987 888999999999999999999999999999999999954433 2 334566655 9
Q ss_pred EEEE-----EEEEEeCCCeEEEEEcCCCcE---EEEE-ecCCCCeeEEEEcCCCCEEEEEcCCCe---------------
Q 046394 90 KLQF-----LLASINKLGQLRYQNVTMGEI---VGNF-WTGLGRTDVIRVNPFNGVVSLGHSGGT--------------- 145 (378)
Q Consensus 90 ~l~~-----~l~s~~~d~~i~iwd~~~~~~---~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------- 145 (378)
+++| +|++++.|+.|++||+..+.. ...+ ..|...|.+++|+|++.+|++++.++.
T Consensus 101 ~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 180 (372)
T 1k8k_C 101 CVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERP 180 (372)
T ss_dssp EEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCC
T ss_pred EEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccc
Confidence 9999 999999999999999998762 3333 457889999999999999999998876
Q ss_pred -----------------eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--c-CCceEEEEecCCCc--
Q 046394 146 -----------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--P-GHAKTLDFSRKDSG-- 203 (378)
Q Consensus 146 -----------------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~-~~i~~~~~sp~g~~-- 203 (378)
+.+|...|.+++|+|++++|++++.|+.|++||+++++++..+ + ..+.+++|+|+|.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 260 (372)
T 1k8k_C 181 APTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVA 260 (372)
T ss_dssp CCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEE
T ss_pred cccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEE
Confidence 2257788999999999999999999999999999999998888 3 68999999998875
Q ss_pred -------cccCCCC--Cc--------------------------------eE------EEe-eccCCcceeeeEEc-CCC
Q 046394 204 -------DFSGSHN--YN--------------------------------RY------MGY-SMVKGYQIGKVSFR-PYE 234 (378)
Q Consensus 204 -------~~~~~~~--~~--------------------------------~~------~~~-~~~~~~~v~~~~~s-p~g 234 (378)
.+|+... +. .. ... .+ |..+|++++|+ ++|
T Consensus 261 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~g 339 (372)
T 1k8k_C 261 AGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSL-HKNSVSQISVLSGGK 339 (372)
T ss_dssp EETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSS-SSSCEEEEEEEESTT
T ss_pred EEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccccccc-ccCCcceeEEecCCC
Confidence 3444333 10 00 112 24 88899999976 666
Q ss_pred ---CeEEEecCCCeEEEE
Q 046394 235 ---DVLGIGHSMGVSGIL 249 (378)
Q Consensus 235 ---~~l~~~~~~g~~~~~ 249 (378)
.+|++|+.||.+.+|
T Consensus 340 ~~~~~l~s~~~Dg~i~~W 357 (372)
T 1k8k_C 340 AKCSQFCTTGMDGGMSIW 357 (372)
T ss_dssp TSCSEEEEEETTSEEEEE
T ss_pred cceeeEEEecCCCceEEE
Confidence 788877777755444
No 49
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=7.9e-29 Score=220.26 Aligned_cols=228 Identities=13% Similarity=0.115 Sum_probs=187.0
Q ss_pred cceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC-C---eEEeec--cCCCe-eEEEE---
Q 046394 24 EAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG-T---ELHCSK--EHGEV-LKLQF--- 93 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~-~---~~~~~~--~~~~~-~~l~~--- 93 (378)
++.+..|+............|...|.+++|+|++++|++++ ||.|++||... . .+..+. .|... .+++|
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (337)
T 1gxr_A 30 PDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD 108 (337)
T ss_dssp TTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTT
T ss_pred CCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCC
Confidence 33445555555555566668999999999999999999998 99999999533 2 233333 56665 99999
Q ss_pred --EEEEEeCCCeEEEEEcCCCc--EEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCCEEE
Q 046394 94 --LLASINKLGQLRYQNVTMGE--IVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPVSA 155 (378)
Q Consensus 94 --~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~v~~ 155 (378)
++++++.|+.|++||+.+++ ....+..+...+.+++|+|++.+|++++.++. +..|...|.+
T Consensus 109 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~ 188 (337)
T 1gxr_A 109 GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 188 (337)
T ss_dssp SSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEE
Confidence 89999999999999999887 66777888899999999999999999999887 5678999999
Q ss_pred EEEecCCCEEEEEECCCeEEEEEcCCceeeeee--cCCceEEEEecCCCc----------cccCCCCCceEEEeeccCCc
Q 046394 156 LAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSMVKGY 223 (378)
Q Consensus 156 ~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~~~~~ 223 (378)
++|+|++++|++++.|+.|++||+++++.+..+ ...+.+++|+|+|.+ .+|+....... .... |..
T Consensus 189 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~-~~~ 266 (337)
T 1gxr_A 189 IDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHL-HES 266 (337)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECC-CSS
T ss_pred EEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcC-Ccc
Confidence 999999999999999999999999999988887 578999999998875 45555554443 3444 788
Q ss_pred ceeeeEEcCCCCeEEEecCCCeEEEEEcCCC
Q 046394 224 QIGKVSFRPYEDVLGIGHSMGVSGILIPGSG 254 (378)
Q Consensus 224 ~v~~~~~sp~g~~l~~~~~~g~~~~~~~~s~ 254 (378)
+|.++.|+|++.+|++++.+|.+.+|....+
T Consensus 267 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 267 CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred ceeEEEECCCCCEEEEecCCCcEEEEECCCC
Confidence 8999999999999999999998877765443
No 50
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=3.3e-30 Score=227.89 Aligned_cols=211 Identities=14% Similarity=0.070 Sum_probs=168.1
Q ss_pred EeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCC-CC--eEEeeccCCCe-eEEEE-------EEEEEeCCCeEEEEE
Q 046394 40 DIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRD-GT--ELHCSKEHGEV-LKLQF-------LLASINKLGQLRYQN 108 (378)
Q Consensus 40 ~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~-~~--~~~~~~~~~~~-~~l~~-------~l~s~~~d~~i~iwd 108 (378)
.+.+|...|++++|+|+|++||+|+.|++|+|||.. +. .+..+.+|.+. .+++| +|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 456899999999999999999999999999999954 32 45778999876 99998 799999999999999
Q ss_pred cCCC--cEEEEEecCCCCeeEEEEcCC--CCEEEEEcCCCe-----------------eeecCCCEEEEEEecC------
Q 046394 109 VTMG--EIVGNFWTGLGRTDVIRVNPF--NGVVSLGHSGGT-----------------MLCHQGPVSALAFHPN------ 161 (378)
Q Consensus 109 ~~~~--~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~-----------------~~~h~~~v~~~~~sp~------ 161 (378)
+.++ ..+..+..|...|.+++|+|+ +.+|++++.|+. +.+|...|.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 9887 466778889999999999998 789999999986 2357788999999997
Q ss_pred -----------CCEEEEEECCCeEEEEEcCCc---eeeeee--c-CCceEEEEecCC----C----------ccccCCCC
Q 046394 162 -----------GHLMATSGKDCKIKIWDLRKY---EVLQTL--P-GHAKTLDFSRKD----S----------GDFSGSHN 210 (378)
Q Consensus 162 -----------g~~l~t~~~d~~i~iwd~~~~---~~~~~~--~-~~i~~~~~sp~g----~----------~~~~~~~~ 210 (378)
+.+|++++.|++|+|||++.. .++..+ | ..|.+++|+|++ . ..+|+...
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 478999999999999999764 455566 3 679999999986 2 25665543
Q ss_pred C---c-eEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEEc
Q 046394 211 Y---N-RYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIP 251 (378)
Q Consensus 211 ~---~-~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~ 251 (378)
. . ....+.. |...|++++|+|+|.+||+++.||.+.+|-.
T Consensus 248 ~~~~~~~~~~~~~-~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 248 ASSNTWSPKLLHK-FNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp TTCCCCBCCEEEE-CSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred ccccchhhhhhhc-CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 1 1 1122334 6778999999999999998888887776653
No 51
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=4.4e-29 Score=243.92 Aligned_cols=205 Identities=16% Similarity=0.120 Sum_probs=178.6
Q ss_pred eEEeecCCCCceEEEEcCCC-CEEEEEeCCCcEEEEeCC------CCeEEeeccCCCe-eEEEE-----EEEEEeCCCeE
Q 046394 38 QYDIMLPELGPYTLDFTSSG-RYMAAAGCKGYPYFYNRD------GTELHCSKEHGEV-LKLQF-----LLASINKLGQL 104 (378)
Q Consensus 38 ~~~l~~~~~~v~~~~~sp~g-~~l~~~~~dg~i~iwd~~------~~~~~~~~~~~~~-~~l~~-----~l~s~~~d~~i 104 (378)
...+.+|...|++++|+|++ ++|++|+.||+|++||.. +.....+.+|... .+++| +|++|+.|++|
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 45688999999999999875 799999999999999953 2345678899876 99999 99999999999
Q ss_pred EEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe-----------------eeecCCCEEEEEEecCC--CEE
Q 046394 105 RYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT-----------------MLCHQGPVSALAFHPNG--HLM 165 (378)
Q Consensus 105 ~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-----------------~~~h~~~v~~~~~sp~g--~~l 165 (378)
++||+.++..+..+..|...|.+++|+|++.+|++++.|+. ..+|...|.+++|+|++ ..|
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 99999999999999999999999999999999999999987 13588899999999986 689
Q ss_pred EEEECCCeEEEEEcCCceeeeee--c-CCceEEEEecCCCc----------cccCCCCCceEEEeeccCCcceeeeEEcC
Q 046394 166 ATSGKDCKIKIWDLRKYEVLQTL--P-GHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSMVKGYQIGKVSFRP 232 (378)
Q Consensus 166 ~t~~~d~~i~iwd~~~~~~~~~~--~-~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 232 (378)
++++.|++|+|||++++++...+ | ..|++++|+|+|.+ .+|+......+..+.. ...|.+++|+|
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~sp 612 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA--NSVIHALCFSP 612 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC--SSCEEEEEECS
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC--CCcEEEEEEcC
Confidence 99999999999999999988888 3 68999999998875 6777777777666543 56799999999
Q ss_pred CCCeEEEecCCC
Q 046394 233 YEDVLGIGHSMG 244 (378)
Q Consensus 233 ~g~~l~~~~~~g 244 (378)
++.+|+++++++
T Consensus 613 ~~~~l~~~~~~~ 624 (694)
T 3dm0_A 613 NRYWLCAATEHG 624 (694)
T ss_dssp SSSEEEEEETTE
T ss_pred CCcEEEEEcCCC
Confidence 999888876654
No 52
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.8e-29 Score=220.44 Aligned_cols=215 Identities=14% Similarity=0.080 Sum_probs=167.2
Q ss_pred cceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC---CeEEee-cc-CCCe-eEEEE-----EEEEEeCCC
Q 046394 34 SSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG---TELHCS-KE-HGEV-LKLQF-----LLASINKLG 102 (378)
Q Consensus 34 ~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~---~~~~~~-~~-~~~~-~~l~~-----~l~s~~~d~ 102 (378)
+.+.+..+.+|...|++++|+|+ +||+|+.|+.|++||... ..+..+ .+ |... .+++| +|++++.|+
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~ 80 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS 80 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS
T ss_pred ccccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC
Confidence 34567789999999999999987 999999999999999654 334455 34 7765 99999 999999999
Q ss_pred eEEEEEcCC-------CcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe------------------eeecCCCEEEEE
Q 046394 103 QLRYQNVTM-------GEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT------------------MLCHQGPVSALA 157 (378)
Q Consensus 103 ~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~------------------~~~h~~~v~~~~ 157 (378)
+|++||+.. .+.+..+.+|...|.+++|+|++.+|++++.|+. +.+|...|.+++
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 999999853 3567788899999999999999999999999887 346889999999
Q ss_pred EecCCCEEEEEECCCeEEEEEcCCc--eeeeee--c-CCceEEEEecC--CCc----------cccCCCCC--------c
Q 046394 158 FHPNGHLMATSGKDCKIKIWDLRKY--EVLQTL--P-GHAKTLDFSRK--DSG----------DFSGSHNY--------N 212 (378)
Q Consensus 158 ~sp~g~~l~t~~~d~~i~iwd~~~~--~~~~~~--~-~~i~~~~~sp~--g~~----------~~~~~~~~--------~ 212 (378)
|+|++.+|++++.|++|+|||+.++ .++..+ | ..|.+++|+|+ +.+ .+|+.... .
T Consensus 161 ~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 161 WHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 9999999999999999999999876 566777 3 68999999998 432 44543221 1
Q ss_pred eEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEEc
Q 046394 213 RYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIP 251 (378)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~ 251 (378)
....+...|...|++++|++++ +|++++.||.+.+|..
T Consensus 241 ~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~ 278 (330)
T 2hes_X 241 CEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEE 278 (330)
T ss_dssp EEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEE
T ss_pred EeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEc
Confidence 2222222377889999999765 7777777777666653
No 53
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.2e-29 Score=235.21 Aligned_cols=185 Identities=12% Similarity=-0.004 Sum_probs=152.6
Q ss_pred EEEeccceeeeeecccceee----EEeecCCCCceEEEEcCC------CCEEEEEeCCCcEEEEeCCCC-----------
Q 046394 19 WRIKQEAIAREVDILSSRNQ----YDIMLPELGPYTLDFTSS------GRYMAAAGCKGYPYFYNRDGT----------- 77 (378)
Q Consensus 19 ~~~~~~~~i~~~d~~~~~~~----~~l~~~~~~v~~~~~sp~------g~~l~~~~~dg~i~iwd~~~~----------- 77 (378)
...+.|+.|++||+.+++.. ..+..|.+.|.+++|+|+ +.+||+|+.||+|+|||+...
T Consensus 177 aS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~ 256 (524)
T 2j04_B 177 DKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCE 256 (524)
T ss_dssp -----CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCC
T ss_pred ccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeec
Confidence 44567899999999887643 446778889999999997 579999999999999996432
Q ss_pred -eEEeeccCCCe-eEEEE----EEEEEeCCCeEEEEEcCCCc-EEEEEecCCCCeeEE--EEcCCC-CEEEEEcCCCe--
Q 046394 78 -ELHCSKEHGEV-LKLQF----LLASINKLGQLRYQNVTMGE-IVGNFWTGLGRTDVI--RVNPFN-GVVSLGHSGGT-- 145 (378)
Q Consensus 78 -~~~~~~~~~~~-~~l~~----~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~~--~~s~~~-~~l~~~~~d~~-- 145 (378)
+...+.+|... ++++| .|++|+.||+|++||+.++. +...+..|...|.++ +|+|++ .+|++++.|+.
T Consensus 257 ~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk 336 (524)
T 2j04_B 257 KPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFY 336 (524)
T ss_dssp SCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred CceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence 12467778775 99999 99999999999999998764 456688899999999 678888 89999999998
Q ss_pred ------------eeecCC--CEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--c-CCceEEEEecCCCc
Q 046394 146 ------------MLCHQG--PVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--P-GHAKTLDFSRKDSG 203 (378)
Q Consensus 146 ------------~~~h~~--~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~-~~i~~~~~sp~g~~ 203 (378)
+.+|.. .|.+++|+|++..|++++.|++|+|||++++.++.++ | ..|++++|||+|.+
T Consensus 337 lWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~ 411 (524)
T 2j04_B 337 IFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPM 411 (524)
T ss_dssp EECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCB
T ss_pred EEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCe
Confidence 345653 5889999999999999999999999999999887777 3 78999999998874
No 54
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=4.4e-30 Score=232.52 Aligned_cols=187 Identities=11% Similarity=0.072 Sum_probs=156.6
Q ss_pred eeEEEeccceeeeeecccc--eeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC-C---eEEeeccCCCe-e
Q 046394 17 KTWRIKQEAIAREVDILSS--RNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG-T---ELHCSKEHGEV-L 89 (378)
Q Consensus 17 ~~~~~~~~~~i~~~d~~~~--~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~-~---~~~~~~~~~~~-~ 89 (378)
..+....++.|++||+.++ +....+.+|...|.+++|+|++++|++|+.||.|++||... . ....+..|... .
T Consensus 25 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~ 104 (377)
T 3dwl_C 25 EFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAAT 104 (377)
T ss_dssp EEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEE
T ss_pred EEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceE
Confidence 3444457899999999988 78888999999999999999999999999999999999544 3 46677788775 9
Q ss_pred EEEE-----EEEEEeCCCeEEEEEcCCCc---EEEEEec-CCCCeeEEEEcCCCCEEEEEcCCCe-----ee--------
Q 046394 90 KLQF-----LLASINKLGQLRYQNVTMGE---IVGNFWT-GLGRTDVIRVNPFNGVVSLGHSGGT-----ML-------- 147 (378)
Q Consensus 90 ~l~~-----~l~s~~~d~~i~iwd~~~~~---~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~-----~~-------- 147 (378)
+++| +|++++.|+.|++||+.+++ ....+.. |...|.+++|+|++.+|++++.|+. +.
T Consensus 105 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 184 (377)
T 3dwl_C 105 FVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKP 184 (377)
T ss_dssp EEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CC
T ss_pred EEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCc
Confidence 9999 89999999999999999877 3677777 8999999999999999999999986 11
Q ss_pred ------------------ecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCcee----eeee---cCCceEEEEecCCC
Q 046394 148 ------------------CHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEV----LQTL---PGHAKTLDFSRKDS 202 (378)
Q Consensus 148 ------------------~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~----~~~~---~~~i~~~~~sp~g~ 202 (378)
+|...|.+++|+|+|++|++++.|+.|++||+.++.. +..+ ...+.+++|+|+|.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 264 (377)
T 3dwl_C 185 EASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESA 264 (377)
T ss_dssp CSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTE
T ss_pred cccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCC
Confidence 6888999999999999999999999999999999877 5666 36799999999987
Q ss_pred c
Q 046394 203 G 203 (378)
Q Consensus 203 ~ 203 (378)
+
T Consensus 265 ~ 265 (377)
T 3dwl_C 265 I 265 (377)
T ss_dssp E
T ss_pred E
Confidence 5
No 55
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=1.3e-28 Score=224.71 Aligned_cols=238 Identities=10% Similarity=0.050 Sum_probs=195.8
Q ss_pred ceeeEEEeccceeeeeecccceeeEEee-------------cCCCCceEEEEcC-CCCEEEEEeCCCcEEEEeCC-CCeE
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIM-------------LPELGPYTLDFTS-SGRYMAAAGCKGYPYFYNRD-GTEL 79 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~-------------~~~~~v~~~~~sp-~g~~l~~~~~dg~i~iwd~~-~~~~ 79 (378)
....+....++.|++||+.++.....+. +|...|.+++|+| ++.+|++++.||.|++||.. +..+
T Consensus 56 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 135 (408)
T 4a11_B 56 GRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTA 135 (408)
T ss_dssp CCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccc
Confidence 4456667779999999999887665554 5889999999999 77899999999999999954 5555
Q ss_pred EeeccCCCeeEEEE--------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCC-EEEEEcCCCe-----
Q 046394 80 HCSKEHGEVLKLQF--------LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNG-VVSLGHSGGT----- 145 (378)
Q Consensus 80 ~~~~~~~~~~~l~~--------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~----- 145 (378)
..+.....+.++.| ++++++.|+.|++||+.+++.+..+..|...|.+++|+|++. +|++++.|+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d 215 (408)
T 4a11_B 136 DVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWD 215 (408)
T ss_dssp EEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred eeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEE
Confidence 55654444577777 799999999999999999999999999999999999999998 6889999887
Q ss_pred ----------e---------------eecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--c---------
Q 046394 146 ----------M---------------LCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--P--------- 189 (378)
Q Consensus 146 ----------~---------------~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~--------- 189 (378)
+ ..|...|.+++|+|++++|++++.|+.|++||+.+++....+ +
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 295 (408)
T 4a11_B 216 VRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGL 295 (408)
T ss_dssp TTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCC
T ss_pred CCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccc
Confidence 1 468899999999999999999999999999999987765433 0
Q ss_pred -------CCceEEEEecCCCccccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEEcCC
Q 046394 190 -------GHAKTLDFSRKDSGDFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGS 253 (378)
Q Consensus 190 -------~~i~~~~~sp~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~~s 253 (378)
....-+..+.++...+|+.....++..+.+ |...|++++|+|++.+|++|+.||.+.+|....
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 296 KFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG-HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp CCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC-CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC
T ss_pred eeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc-CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCC
Confidence 011222334466678999989999998888 889999999999999999888888777665443
No 56
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=7.1e-29 Score=226.04 Aligned_cols=232 Identities=14% Similarity=0.129 Sum_probs=194.7
Q ss_pred eeeEEEeccceeeeeecccce------eeEEeecCCCCceEEEEcCC----C---CEEEEEeCCCcEEEEeC-CCCe---
Q 046394 16 EKTWRIKQEAIAREVDILSSR------NQYDIMLPELGPYTLDFTSS----G---RYMAAAGCKGYPYFYNR-DGTE--- 78 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~------~~~~l~~~~~~v~~~~~sp~----g---~~l~~~~~dg~i~iwd~-~~~~--- 78 (378)
...+....++.|++||+.++. ....+.+|...|.+++|+|+ | .+|++++.||.|++||. .+..
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~ 106 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK 106 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccc
Confidence 566677789999999999988 78899999999999999999 9 99999999999999994 3444
Q ss_pred --EEeeccC------CCeeEEEE---------E-EEEEeCCCeEEEEEcCC------CcEEE-----EE-------ecCC
Q 046394 79 --LHCSKEH------GEVLKLQF---------L-LASINKLGQLRYQNVTM------GEIVG-----NF-------WTGL 122 (378)
Q Consensus 79 --~~~~~~~------~~~~~l~~---------~-l~s~~~d~~i~iwd~~~------~~~~~-----~~-------~~~~ 122 (378)
+..+..| ..+.+++| + |++++.|+.|++||+.+ +..+. .+ ..|.
T Consensus 107 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (397)
T 1sq9_A 107 VIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 186 (397)
T ss_dssp EEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSC
T ss_pred ccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCC
Confidence 7788888 33477766 4 99999999999999988 66555 66 3478
Q ss_pred CCeeEEEEcCCCCEEEEEcCCCe--------------eee---c---CCCEEEEEEecCCCEEEEEECC---CeEEEEEc
Q 046394 123 GRTDVIRVNPFNGVVSLGHSGGT--------------MLC---H---QGPVSALAFHPNGHLMATSGKD---CKIKIWDL 179 (378)
Q Consensus 123 ~~v~~~~~s~~~~~l~~~~~d~~--------------~~~---h---~~~v~~~~~sp~g~~l~t~~~d---~~i~iwd~ 179 (378)
..+.+++|+|++ +|++++.++. +.. | ...|.+++|+|++++|++++.| +.|++||+
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~ 265 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYET 265 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEET
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 899999999999 9999999997 555 8 9999999999999999999999 99999999
Q ss_pred CCceeeeee-c---------------CCceEEEEecCCCc----------cccCCCCCceEEEee------ccC------
Q 046394 180 RKYEVLQTL-P---------------GHAKTLDFSRKDSG----------DFSGSHNYNRYMGYS------MVK------ 221 (378)
Q Consensus 180 ~~~~~~~~~-~---------------~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~------~~~------ 221 (378)
++++++..+ . ..+.+++|+|++.+ .+|+.....++..+. . |
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~ 344 (397)
T 1sq9_A 266 EFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIE-IEEDILA 344 (397)
T ss_dssp TTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCS-SGGGCCC
T ss_pred CCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCccc-chhhhhc
Confidence 999887776 2 46899999998874 678888888888887 6 6
Q ss_pred ---------CcceeeeEEcCCC----------CeEEEecCCCeEEEE
Q 046394 222 ---------GYQIGKVSFRPYE----------DVLGIGHSMGVSGIL 249 (378)
Q Consensus 222 ---------~~~v~~~~~sp~g----------~~l~~~~~~g~~~~~ 249 (378)
..+|++++|+|+| .+|++++.||.+.+|
T Consensus 345 g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw 391 (397)
T 1sq9_A 345 VDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWF 391 (397)
T ss_dssp BCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEE
T ss_pred cccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEE
Confidence 8899999999999 455555555554444
No 57
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9e-29 Score=226.69 Aligned_cols=235 Identities=12% Similarity=0.104 Sum_probs=189.9
Q ss_pred eeEEEeccceeeeeeccc----ceeeEEeecCCCCceEEEEcCC-CCEEEEEeCCCcEEEEeCCC-C------eEE---e
Q 046394 17 KTWRIKQEAIAREVDILS----SRNQYDIMLPELGPYTLDFTSS-GRYMAAAGCKGYPYFYNRDG-T------ELH---C 81 (378)
Q Consensus 17 ~~~~~~~~~~i~~~d~~~----~~~~~~l~~~~~~v~~~~~sp~-g~~l~~~~~dg~i~iwd~~~-~------~~~---~ 81 (378)
..+....++.|++||+.+ ......+.+|...|.+++|+|+ +.+|++++.||.|++||... . ... .
T Consensus 81 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 160 (416)
T 2pm9_A 81 IIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQ 160 (416)
T ss_dssp CEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCC
T ss_pred eEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccc
Confidence 455566789999999988 4578888999999999999998 89999999999999999543 3 222 2
Q ss_pred eccCCCe-eEEEE------EEEEEeCCCeEEEEEcCCCcEEEEEecC------CCCeeEEEEcCCC-CEEEEEcCCC---
Q 046394 82 SKEHGEV-LKLQF------LLASINKLGQLRYQNVTMGEIVGNFWTG------LGRTDVIRVNPFN-GVVSLGHSGG--- 144 (378)
Q Consensus 82 ~~~~~~~-~~l~~------~l~s~~~d~~i~iwd~~~~~~~~~~~~~------~~~v~~~~~s~~~-~~l~~~~~d~--- 144 (378)
+..|... .+++| ++++++.|+.|++||+.+++.+..+..+ ...+.+++|+|++ .++++++.++
T Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~ 240 (416)
T 2pm9_A 161 SMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDP 240 (416)
T ss_dssp SCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSC
T ss_pred ccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCc
Confidence 3566665 99999 8999999999999999999999888876 7889999999998 6899999887
Q ss_pred e---------------ee-ecCCCEEEEEEec-CCCEEEEEECCCeEEEEEcCCceeeeee---cCCceEEEEecCC-Cc
Q 046394 145 T---------------ML-CHQGPVSALAFHP-NGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKD-SG 203 (378)
Q Consensus 145 ~---------------~~-~h~~~v~~~~~sp-~g~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g-~~ 203 (378)
. +. +|...|.+++|+| ++++|++++.|+.|++||+.+++++..+ ...+.+++|+|++ .+
T Consensus 241 ~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 320 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDL 320 (416)
T ss_dssp CCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTE
T ss_pred eEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCE
Confidence 4 45 7999999999999 9999999999999999999999998888 3789999999998 43
Q ss_pred ----------cccCCCCCceEEEe-----------------------------------eccCCcceeeeEEcCCCCeEE
Q 046394 204 ----------DFSGSHNYNRYMGY-----------------------------------SMVKGYQIGKVSFRPYEDVLG 238 (378)
Q Consensus 204 ----------~~~~~~~~~~~~~~-----------------------------------~~~~~~~v~~~~~sp~g~~l~ 238 (378)
.+|+.......... .. +..++++++|+|+|
T Consensus 321 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg---- 395 (416)
T 2pm9_A 321 FACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTW-YGEPSPAAHWAFGG---- 395 (416)
T ss_dssp EEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCST-TCCCSCCCEEETTT----
T ss_pred EEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCcc-ccCCccceEEeeCC----
Confidence 34433222211000 00 45677899999999
Q ss_pred EecCCCeEEEEEcCCCCcccccccCC
Q 046394 239 IGHSMGVSGILIPGSGEPNFDSWVAN 264 (378)
Q Consensus 239 ~~~~~g~~~~~~~~s~d~~i~~w~~~ 264 (378)
.++++++.|+.|++|++.
T Consensus 396 --------~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 396 --------KLVQITPDGKGVSITNPK 413 (416)
T ss_dssp --------EEECBCTTSSCBCCBCCC
T ss_pred --------eEEEEeCCCCeEEEEEec
Confidence 556666677788999864
No 58
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1e-28 Score=220.13 Aligned_cols=236 Identities=13% Similarity=0.130 Sum_probs=178.9
Q ss_pred ceeeEEEeccceeeeeecccc----eeeEEeecCCCCceEEEEcC--CCCEEEEEeCCCcEEEEeCCC----------Ce
Q 046394 15 VEKTWRIKQEAIAREVDILSS----RNQYDIMLPELGPYTLDFTS--SGRYMAAAGCKGYPYFYNRDG----------TE 78 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~----~~~~~l~~~~~~v~~~~~sp--~g~~l~~~~~dg~i~iwd~~~----------~~ 78 (378)
....+....++.|++||+.++ +....+.+|...|.+++|+| ++.+|++|+.||.|++||... ..
T Consensus 23 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~ 102 (351)
T 3f3f_A 23 GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNK 102 (351)
T ss_dssp SSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEE
T ss_pred CCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcce
Confidence 345666777899999999877 45677789999999999999 699999999999999999543 44
Q ss_pred EEeeccCCCe-eEEEE-------EEEEEeCCCeEEEEEcCCCcEEEEEe-------------cCCCCeeEEEEcCC---C
Q 046394 79 LHCSKEHGEV-LKLQF-------LLASINKLGQLRYQNVTMGEIVGNFW-------------TGLGRTDVIRVNPF---N 134 (378)
Q Consensus 79 ~~~~~~~~~~-~~l~~-------~l~s~~~d~~i~iwd~~~~~~~~~~~-------------~~~~~v~~~~~s~~---~ 134 (378)
+..+..|... .+++| ++++++.|+.|++||+.+++.+..+. .+...+.+++|+|+ +
T Consensus 103 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 182 (351)
T 3f3f_A 103 LCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSP 182 (351)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSC
T ss_pred eeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCC
Confidence 6778888876 99999 79999999999999998876543322 46678999999997 8
Q ss_pred CEEEEEcCCCe----------------eeecCCCEEEEEEecCC----CEEEEEECCCeEEEEEcCCceeeeee---cCC
Q 046394 135 GVVSLGHSGGT----------------MLCHQGPVSALAFHPNG----HLMATSGKDCKIKIWDLRKYEVLQTL---PGH 191 (378)
Q Consensus 135 ~~l~~~~~d~~----------------~~~h~~~v~~~~~sp~g----~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~ 191 (378)
..+++++.++. +.+|...|++++|+|++ ++|++++.||.|++||++++...... ...
T Consensus 183 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 262 (351)
T 3f3f_A 183 EKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTN 262 (351)
T ss_dssp CEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----------
T ss_pred cEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccc
Confidence 89999998877 45789999999999998 89999999999999999876544333 111
Q ss_pred ceEEEEecCCC--------------ccccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEEc
Q 046394 192 AKTLDFSRKDS--------------GDFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIP 251 (378)
Q Consensus 192 i~~~~~sp~g~--------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~ 251 (378)
.....+++... ..+|.......+..+.+ |...|++++|+|+|.+|++|+.||.+.+|..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 335 (351)
T 3f3f_A 263 SNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD-HNGEVWSVSWNLTGTILSSAGDDGKVRLWKA 335 (351)
T ss_dssp ----------------------------CCSEEEEEEEEECT-TSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred eeccCCCcccccccccccccccceeeeecccccccEEEEEec-ccccEEEEEEcCCCCEEEEecCCCcEEEEec
Confidence 22222222211 24455555567777777 8889999999999988888888876666643
No 59
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.8e-29 Score=224.79 Aligned_cols=214 Identities=13% Similarity=0.108 Sum_probs=176.7
Q ss_pred eeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeC---CCCeEEeeccCCCe-eEEEE-------EEEEEeCCCeE
Q 046394 36 RNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNR---DGTELHCSKEHGEV-LKLQF-------LLASINKLGQL 104 (378)
Q Consensus 36 ~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~---~~~~~~~~~~~~~~-~~l~~-------~l~s~~~d~~i 104 (378)
+.+..+.+|...|++++|+|++++||+|+.||.|+|||. ++..+..+.+|... ++++| +|++++.|+.|
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 445678899999999999999999999999999999995 34556778889876 99999 89999999999
Q ss_pred EEEEcCCCc--EEEEEecCCCCeeEEEEcCC--CCEEEEEcCCCe----------------eeecCCCEEEEEEec----
Q 046394 105 RYQNVTMGE--IVGNFWTGLGRTDVIRVNPF--NGVVSLGHSGGT----------------MLCHQGPVSALAFHP---- 160 (378)
Q Consensus 105 ~iwd~~~~~--~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~----------------~~~h~~~v~~~~~sp---- 160 (378)
++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+. +..|...|.+++|+|
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--
T ss_pred EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccc
Confidence 999999987 67778889999999999999 999999999987 557889999999999
Q ss_pred ---------CCCEEEEEECCCeEEEEEcCCce----eeeee---cCCceEEEEecC---CCc----------cccCCCCC
Q 046394 161 ---------NGHLMATSGKDCKIKIWDLRKYE----VLQTL---PGHAKTLDFSRK---DSG----------DFSGSHNY 211 (378)
Q Consensus 161 ---------~g~~l~t~~~d~~i~iwd~~~~~----~~~~~---~~~i~~~~~sp~---g~~----------~~~~~~~~ 211 (378)
++.+|++++.|+.|++||++++. ++..+ ...+.+++|+|+ +.+ .+|+....
T Consensus 162 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 162 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp --------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 69999999999999999998754 33444 367999999999 554 55554443
Q ss_pred c-----eEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEE
Q 046394 212 N-----RYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 212 ~-----~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~ 250 (378)
. .+..... |...|++++|+|+|.+|++++.||.+.+|.
T Consensus 242 ~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 242 QGPWKKTLLKEEK-FPDVLWRASWSLSGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp TSCCEEEESSSSC-CSSCEEEEEECSSSCCEEEEESSSSEEEEE
T ss_pred Cccceeeeecccc-CCCcEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 2 1111122 667899999999999998888888776664
No 60
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=1.5e-28 Score=225.68 Aligned_cols=234 Identities=11% Similarity=0.082 Sum_probs=187.1
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEE
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQ 92 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~ 92 (378)
....+....++.|++||+.++.....+.+|...|.+++|+|++++|++|+.||.|++|| .++..+..+.+|... .+++
T Consensus 109 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~ 188 (420)
T 3vl1_A 109 MRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIA 188 (420)
T ss_dssp SCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEE
T ss_pred CCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEE
Confidence 44566677889999999999999888889999999999999999999999999999999 467778889999876 9999
Q ss_pred E-----EEEEEeCCCeEEEEEcCCCcEEEEEecC---C---------------------CCeeEEEEcCCCCEEEEEcCC
Q 046394 93 F-----LLASINKLGQLRYQNVTMGEIVGNFWTG---L---------------------GRTDVIRVNPFNGVVSLGHSG 143 (378)
Q Consensus 93 ~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~---~---------------------~~v~~~~~s~~~~~l~~~~~d 143 (378)
| +|++++.|++|++||+.+++.+..+..+ . ..+.+++|+|++.+|++++.+
T Consensus 189 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 268 (420)
T 3vl1_A 189 IIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS 268 (420)
T ss_dssp EETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT
T ss_pred EcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC
Confidence 9 8999999999999999999999888753 2 444555668999999999999
Q ss_pred Ce---------------eeecCCCEEEEEEecCCC-EEEEEECCCeEEEEEcCCcee-eeee---c-CCceEEEEecCCC
Q 046394 144 GT---------------MLCHQGPVSALAFHPNGH-LMATSGKDCKIKIWDLRKYEV-LQTL---P-GHAKTLDFSRKDS 202 (378)
Q Consensus 144 ~~---------------~~~h~~~v~~~~~sp~g~-~l~t~~~d~~i~iwd~~~~~~-~~~~---~-~~i~~~~~sp~g~ 202 (378)
+. ...|...|.+++|+|++. +|++++.||.|++||++++.. +..+ + ..++++.| |++.
T Consensus 269 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~ 347 (420)
T 3vl1_A 269 GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGA 347 (420)
T ss_dssp SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTE
T ss_pred CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCC
Confidence 87 235788999999999998 999999999999999998754 5555 2 55677755 4544
Q ss_pred c----------cccCCCCC---------ceEEEeeccCCcceeeeEEcCCCC---eEEEecCCCeEEEEE
Q 046394 203 G----------DFSGSHNY---------NRYMGYSMVKGYQIGKVSFRPYED---VLGIGHSMGVSGILI 250 (378)
Q Consensus 203 ~----------~~~~~~~~---------~~~~~~~~~~~~~v~~~~~sp~g~---~l~~~~~~g~~~~~~ 250 (378)
+ .+|+.... ........ +...|.+++|+|++. .|++++.+|.+.+|-
T Consensus 348 ~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~ 416 (420)
T 3vl1_A 348 LFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVS-NDDAVSQFCYVSDDESNGEVLEVGKNNFCALYN 416 (420)
T ss_dssp EEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECC-SSCCCCEEEEECCSSSSCEEEEEETTTEEEEEE
T ss_pred EEEEecCCccEEEEeccCCCCCccceeccCccEEcc-CCcceEEEEEccCCCCcceEEEEcCCceEEEEe
Confidence 3 55554331 11112333 667899999999998 566666677666554
No 61
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=2.1e-28 Score=219.38 Aligned_cols=226 Identities=13% Similarity=0.109 Sum_probs=184.5
Q ss_pred cceeeeeecccceeeEEe-ecCCCCceEEEEcCC---CCEEEEEeCCCcEEEEeC-CCC-eEEeeccCCCe-eEEEE---
Q 046394 24 EAIAREVDILSSRNQYDI-MLPELGPYTLDFTSS---GRYMAAAGCKGYPYFYNR-DGT-ELHCSKEHGEV-LKLQF--- 93 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l-~~~~~~v~~~~~sp~---g~~l~~~~~dg~i~iwd~-~~~-~~~~~~~~~~~-~~l~~--- 93 (378)
++.|++||+.+++..... ..|...|.+++|+|+ |.+|++|+.||.|++||. .+. .+..+.+|... .++.|
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 122 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGG 122 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESG
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccc
Confidence 899999999988765443 368899999999998 699999999999999995 444 67888899876 88854
Q ss_pred --------EEEEEeCCCeEEEEEcCCCc-EEEEEecCCC----CeeEEE----EcCCCCEEEEEcCCCe-----------
Q 046394 94 --------LLASINKLGQLRYQNVTMGE-IVGNFWTGLG----RTDVIR----VNPFNGVVSLGHSGGT----------- 145 (378)
Q Consensus 94 --------~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~----~v~~~~----~s~~~~~l~~~~~d~~----------- 145 (378)
+|++++.|+.|++||+.++. .+..+..+.+ .+.+++ |+|++.+|++++.++.
T Consensus 123 ~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 123 LGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL 202 (357)
T ss_dssp GGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE
T ss_pred cccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce
Confidence 89999999999999999887 6777766544 788888 7899999999999987
Q ss_pred --eeecCCCEEEEEEec---CCCEEEEEECCCeEEEEEcCCceeeeee--------cCCceEEEEecCCC-c--------
Q 046394 146 --MLCHQGPVSALAFHP---NGHLMATSGKDCKIKIWDLRKYEVLQTL--------PGHAKTLDFSRKDS-G-------- 203 (378)
Q Consensus 146 --~~~h~~~v~~~~~sp---~g~~l~t~~~d~~i~iwd~~~~~~~~~~--------~~~i~~~~~sp~g~-~-------- 203 (378)
...|...|.+++|+| ++.+|++++.||.|++||++++.++..+ ...+++++|+|++. +
T Consensus 203 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 282 (357)
T 3i2n_A 203 RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG 282 (357)
T ss_dssp EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC
Confidence 556889999999999 9999999999999999999987664332 36899999999887 2
Q ss_pred --cccCCCCC-------------------ceEEEeeccCCcceeeeEEcCCCCeEE-EecCCCeEEEEE
Q 046394 204 --DFSGSHNY-------------------NRYMGYSMVKGYQIGKVSFRPYEDVLG-IGHSMGVSGILI 250 (378)
Q Consensus 204 --~~~~~~~~-------------------~~~~~~~~~~~~~v~~~~~sp~g~~l~-~~~~~g~~~~~~ 250 (378)
.+|+.... ..+..+.+ |..+|++++|+|+|.+|+ +++.||.+.+|.
T Consensus 283 ~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~ 350 (357)
T 3i2n_A 283 GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL-STQPISSLDWSPDKRGLCVCSSFDQTVRVLI 350 (357)
T ss_dssp EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC-CSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred cEEEeecCCCcccccccCCCCccccccccceeecccc-CCCCeeEEEEcCCCCeEEEEecCCCcEEEEE
Confidence 44544321 34555666 888999999999998887 677777665554
No 62
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=2.1e-28 Score=253.88 Aligned_cols=234 Identities=15% Similarity=0.137 Sum_probs=206.1
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEE
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQ 92 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~ 92 (378)
....+....++.|++||+.+++.+..+.+|...|.+++|+|+|++|++|+.||.|+||| .++..+..+.+|... .+++
T Consensus 627 ~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~ 706 (1249)
T 3sfz_A 627 GQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCH 706 (1249)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEE
Confidence 34556667889999999999999999999999999999999999999999999999999 577888999999876 9999
Q ss_pred E-------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------e-----
Q 046394 93 F-------LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------M----- 146 (378)
Q Consensus 93 ~-------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~----- 146 (378)
| ++++++.|+.|++||+.+++++..+.+|.+.|.+++|+|++.++++++.|+. +
T Consensus 707 ~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~ 786 (1249)
T 3sfz_A 707 FTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRF 786 (1249)
T ss_dssp ECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCC
T ss_pred EecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceeccccc
Confidence 9 7999999999999999999999999999999999999999999999999998 0
Q ss_pred --------eecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee----cCCceEEEEecCCCc----------c
Q 046394 147 --------LCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL----PGHAKTLDFSRKDSG----------D 204 (378)
Q Consensus 147 --------~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~----~~~i~~~~~sp~g~~----------~ 204 (378)
..+...+.+++|+|+|.++++++ ++.|.+||+.++..+..+ ...+.+++|+|++.+ .
T Consensus 787 ~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~ 865 (1249)
T 3sfz_A 787 FLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVE 865 (1249)
T ss_dssp C--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEE
T ss_pred ccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEE
Confidence 01123678899999999998887 688999999998887776 378899999998774 6
Q ss_pred ccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEE
Q 046394 205 FSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~ 250 (378)
+|+..+...+..+.+ |...|++++|+|+|.+|++++.||.+.+|.
T Consensus 866 vwd~~~~~~~~~~~~-h~~~v~~v~~spdg~~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 866 LWNIDSRLKVADCRG-HLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910 (1249)
T ss_dssp EEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEcCCCceeeecCC-CccceEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 677777777777777 888999999999999999999999877663
No 63
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-28 Score=224.86 Aligned_cols=230 Identities=17% Similarity=0.181 Sum_probs=191.5
Q ss_pred eccceeeeeeccccee--eEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC-----CeEEeeccCCCe-eEEEE
Q 046394 22 KQEAIAREVDILSSRN--QYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG-----TELHCSKEHGEV-LKLQF 93 (378)
Q Consensus 22 ~~~~~i~~~d~~~~~~--~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~-~~l~~ 93 (378)
..++.|++||+.++.. ......|...|.+++|+|++.+|++|+.||.|++||... ..+..+.+|... .+++|
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 121 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKF 121 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEE
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEE
Confidence 5688999999998862 222335788999999999999999999999999999654 477888889876 99999
Q ss_pred ------EEEEEeCCCeEEEEEcCCCc------EEEE---EecCCCCeeEEEEcCC-CCEEEEEcCCCe------------
Q 046394 94 ------LLASINKLGQLRYQNVTMGE------IVGN---FWTGLGRTDVIRVNPF-NGVVSLGHSGGT------------ 145 (378)
Q Consensus 94 ------~l~s~~~d~~i~iwd~~~~~------~~~~---~~~~~~~v~~~~~s~~-~~~l~~~~~d~~------------ 145 (378)
+|++++.|+.|++||+.++. .... +..|...+.+++|+|+ +.+|++++.++.
T Consensus 122 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 201 (416)
T 2pm9_A 122 NAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEV 201 (416)
T ss_dssp CSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEE
T ss_pred cCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcc
Confidence 89999999999999999876 3322 3567889999999999 689999999987
Q ss_pred --eeec------CCCEEEEEEecCC-CEEEEEECCC---eEEEEEcCCc-eeeeee----cCCceEEEEec-CCCc----
Q 046394 146 --MLCH------QGPVSALAFHPNG-HLMATSGKDC---KIKIWDLRKY-EVLQTL----PGHAKTLDFSR-KDSG---- 203 (378)
Q Consensus 146 --~~~h------~~~v~~~~~sp~g-~~l~t~~~d~---~i~iwd~~~~-~~~~~~----~~~i~~~~~sp-~g~~---- 203 (378)
+..| ...|.+++|+|++ .+|++++.|+ .|++||++++ .++..+ ...+.+++|+| ++.+
T Consensus 202 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~ 281 (416)
T 2pm9_A 202 IHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSS 281 (416)
T ss_dssp EEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEE
T ss_pred eEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEE
Confidence 2333 7889999999987 6899999998 9999999986 455544 36799999999 6654
Q ss_pred ------cccCCCCCceEEEeeccCCcceeeeEEcCCC-CeEEEecCCCeEEEEEcC
Q 046394 204 ------DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYE-DVLGIGHSMGVSGILIPG 252 (378)
Q Consensus 204 ------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g-~~l~~~~~~g~~~~~~~~ 252 (378)
.+|+.....++..+.. |...|++++|+|++ .+|++++.||.+.+|...
T Consensus 282 ~~dg~v~~wd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 282 GRDNTVLLWNPESAEQLSQFPA-RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp ESSSEEEEECSSSCCEEEEEEC-SSSCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred eCCCCEEEeeCCCCccceeecC-CCCceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 7888888888888888 88999999999999 788888888877666543
No 64
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=1.7e-27 Score=221.69 Aligned_cols=233 Identities=15% Similarity=0.205 Sum_probs=195.9
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEE
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQ 92 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~ 92 (378)
....+....|+.|++||+.+++.+..+.+|...|.+++|+|++ +|++|+.||.|++|| .++..+..+.+|... .+++
T Consensus 132 ~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~ 210 (464)
T 3v7d_B 132 DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLD 210 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEE
Confidence 3466777889999999999999999999999999999999988 999999999999999 567788889989876 8888
Q ss_pred E-------EEEEEeCCCeEEEEEcCCCcE-----------------------EEEEecCCCCeeEEEEcCCCCEEEEEcC
Q 046394 93 F-------LLASINKLGQLRYQNVTMGEI-----------------------VGNFWTGLGRTDVIRVNPFNGVVSLGHS 142 (378)
Q Consensus 93 ~-------~l~s~~~d~~i~iwd~~~~~~-----------------------~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 142 (378)
| ++++++.|++|++||+.++.. +..+.+|...+.++ ++++.++++++.
T Consensus 211 ~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~ 288 (464)
T 3v7d_B 211 IVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSY 288 (464)
T ss_dssp EEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEET
T ss_pred EecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeC
Confidence 8 799999999999999987652 44566677777766 688999999999
Q ss_pred CCe--------------eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee---cCCceEEEEec------
Q 046394 143 GGT--------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSR------ 199 (378)
Q Consensus 143 d~~--------------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp------ 199 (378)
|+. +.+|...|.+++|+|++++|++++.|+.|++||+++++++.++ ...+.++.|++
T Consensus 289 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~ 368 (464)
T 3v7d_B 289 DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSA 368 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEE
T ss_pred CCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEE
Confidence 987 5679999999999999999999999999999999999999888 36788888875
Q ss_pred --CCCccccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEEcCC
Q 046394 200 --KDSGDFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGS 253 (378)
Q Consensus 200 --~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~~s 253 (378)
||...+|+........... +...+..++|+|++.+|++|+ +|.+.+|...+
T Consensus 369 s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~ 421 (464)
T 3v7d_B 369 AADGSIRGWDANDYSRKFSYH--HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRS 421 (464)
T ss_dssp ETTSEEEEEETTTCCEEEEEE--CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTT
T ss_pred eCCCcEEEEECCCCceeeeec--CCCCccEEEEEeCCCEEEEec-CCeEEEEECCC
Confidence 4555788877666554443 566788899999999888887 66666665433
No 65
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=9.3e-29 Score=256.55 Aligned_cols=234 Identities=18% Similarity=0.208 Sum_probs=206.6
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccCCCe-eEEEE
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEV-LKLQF 93 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~l~~ 93 (378)
....+....++.+++||+.++.....+.+|...|.+++|+|+|++|++++.||.|++||........+..|... .++.|
T Consensus 973 g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~ 1052 (1249)
T 3sfz_A 973 LEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRL 1052 (1249)
T ss_dssp SSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEE
Confidence 34456667789999999999999999999999999999999999999999999999999766666666777765 88888
Q ss_pred ----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCCEEE
Q 046394 94 ----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPVSA 155 (378)
Q Consensus 94 ----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~v~~ 155 (378)
.+++++.|+.|++||+.+++.+..+..|.+.|.+++|+|++.++++++.|+. +.+|.+.|++
T Consensus 1053 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~ 1132 (1249)
T 3sfz_A 1053 LQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRC 1132 (1249)
T ss_dssp CSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEE
T ss_pred cCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEE
Confidence 8999999999999999999999999999999999999999999999999987 6679999999
Q ss_pred EEEecCCCEEEEEECCCeEEEEEcCCceeeeee------------cCCceEEEEecCCCc--------cccCCCCCceEE
Q 046394 156 LAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL------------PGHAKTLDFSRKDSG--------DFSGSHNYNRYM 215 (378)
Q Consensus 156 ~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~------------~~~i~~~~~sp~g~~--------~~~~~~~~~~~~ 215 (378)
++|+|+|++|++++.||.|++||+.+++++..+ ...|++++|+|||.+ .+|+..++..+.
T Consensus 1133 ~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~g~v~vwd~~~g~~~~ 1212 (1249)
T 3sfz_A 1133 SAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGGYLKWWNVATGDSSQ 1212 (1249)
T ss_dssp EEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEESSSEEEBCSSSCBCCC
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECCCeEEEEECCCCceee
Confidence 999999999999999999999999998876543 367999999999876 667777777777
Q ss_pred EeeccCCcceeeeEEcCCCCeEEEecCCCeEEEE
Q 046394 216 GYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGIL 249 (378)
Q Consensus 216 ~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~ 249 (378)
.+.. |...|++++|+|+|.+|++++.+|.+.+|
T Consensus 1213 ~~~~-~~~~i~~~~~s~dg~~l~~~~~dg~v~vw 1245 (1249)
T 3sfz_A 1213 TFYT-NGTNLKKIHVSPDFRTYVTVDNLGILYIL 1245 (1249)
T ss_dssp CCCC-SSCCCCCCEECSSSCCEEEECTTCCEEEE
T ss_pred eeec-cCCcccEEEECCCCCEEEEecCCcEEEEE
Confidence 7766 78889999999999888888888766555
No 66
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=1.1e-27 Score=238.21 Aligned_cols=216 Identities=17% Similarity=0.131 Sum_probs=194.3
Q ss_pred eeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEEE-----EEEEEeCCCeEEEEEc
Q 046394 37 NQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQF-----LLASINKLGQLRYQNV 109 (378)
Q Consensus 37 ~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~~-----~l~s~~~d~~i~iwd~ 109 (378)
....+.+|...|.+++|+|+|.+||+|+.||.|+||| .++..+..+.+|... .+++| +|++++.||.|++||+
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 4567889999999999999999999999999999999 567788889989876 99999 8999999999999999
Q ss_pred CCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe---------------eeecCCCEEEEEEec-CCCEEEEEECCCe
Q 046394 110 TMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT---------------MLCHQGPVSALAFHP-NGHLMATSGKDCK 173 (378)
Q Consensus 110 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~---------------~~~h~~~v~~~~~sp-~g~~l~t~~~d~~ 173 (378)
.+++.+..+..|.+.|.+++|+|++.+|++++.|+. +.+|...|.+++|+| ++++|++++.||+
T Consensus 85 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~ 164 (814)
T 3mkq_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (814)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred CCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCe
Confidence 999999999999999999999999999999999987 567899999999999 8899999999999
Q ss_pred EEEEEcCCceeeeee---c-CCceEEEEec--CCCc----------cccCCCCCceEEEeeccCCcceeeeEEcCCCCeE
Q 046394 174 IKIWDLRKYEVLQTL---P-GHAKTLDFSR--KDSG----------DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVL 237 (378)
Q Consensus 174 i~iwd~~~~~~~~~~---~-~~i~~~~~sp--~g~~----------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 237 (378)
|++||+.++.....+ + ..+.+++|+| ++.+ .+|+......+..+.+ |...|.+++|+|+|.+|
T Consensus 165 v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 243 (814)
T 3mkq_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG-HMSNVSFAVFHPTLPII 243 (814)
T ss_dssp EEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECSSSSEE
T ss_pred EEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEE
Confidence 999999988877766 3 7899999999 7654 6777777777888877 88899999999999999
Q ss_pred EEecCCCeEEEEEcCC
Q 046394 238 GIGHSMGVSGILIPGS 253 (378)
Q Consensus 238 ~~~~~~g~~~~~~~~s 253 (378)
++++.||.+.+|...+
T Consensus 244 ~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 244 ISGSEDGTLKIWNSST 259 (814)
T ss_dssp EEEETTSCEEEEETTT
T ss_pred EEEeCCCeEEEEECCC
Confidence 9999999888886544
No 67
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=8.1e-28 Score=220.77 Aligned_cols=234 Identities=12% Similarity=0.025 Sum_probs=188.5
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCC-CCeEEeeccCCCe-eEEEE
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRD-GTELHCSKEHGEV-LKLQF 93 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~-~~l~~ 93 (378)
...+....++.+++||+.++.....+..| ..+....|+|++++|++|+.||.|++||.. +.....+.+|... .+++|
T Consensus 69 ~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 147 (420)
T 3vl1_A 69 SHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKF 147 (420)
T ss_dssp TTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEE
T ss_pred CeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEE
Confidence 34667777999999999998887777776 445566889999999999999999999954 5555666788876 99999
Q ss_pred -----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------ee---ecCC
Q 046394 94 -----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------ML---CHQG 151 (378)
Q Consensus 94 -----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~---~h~~ 151 (378)
+|++++.|+.|++||+.+++.+..+..|...|.+++|+|++.+|++++.|+. +. .|..
T Consensus 148 ~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 227 (420)
T 3vl1_A 148 FPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHD 227 (420)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTC
T ss_pred CCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCC
Confidence 9999999999999999999999999999999999999999999999999997 22 2444
Q ss_pred CEEEE---------------------EEecCCCEEEEEECCCeEEEEEcCCceeeeee----cCCceEEEEecCCC-c--
Q 046394 152 PVSAL---------------------AFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL----PGHAKTLDFSRKDS-G-- 203 (378)
Q Consensus 152 ~v~~~---------------------~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~----~~~i~~~~~sp~g~-~-- 203 (378)
.|.++ +|+|+|++|++++.||.|++||+++++.+..+ ...+.+++|+|++. +
T Consensus 228 ~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 307 (420)
T 3vl1_A 228 GVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIY 307 (420)
T ss_dssp CEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEE
T ss_pred CccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEE
Confidence 45444 45789999999999999999999999887777 36799999999987 3
Q ss_pred --------cccCCCCCc-eEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEEc
Q 046394 204 --------DFSGSHNYN-RYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIP 251 (378)
Q Consensus 204 --------~~~~~~~~~-~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~ 251 (378)
.+|+..... ++..+..+|..+|+++.| |++.+|++++.||.+.+|..
T Consensus 308 ~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 308 AGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp EEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEE
T ss_pred EEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEec
Confidence 667766543 355555546777888855 57767777776666655543
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=1.2e-27 Score=217.01 Aligned_cols=232 Identities=16% Similarity=0.183 Sum_probs=184.4
Q ss_pred eeecccceeeEEeecCCCCceEEEEcCCC-CEEEEEeCCCcEEEEeCC-CCeEEeec--cCCCe-eEEEE------EEEE
Q 046394 29 EVDILSSRNQYDIMLPELGPYTLDFTSSG-RYMAAAGCKGYPYFYNRD-GTELHCSK--EHGEV-LKLQF------LLAS 97 (378)
Q Consensus 29 ~~d~~~~~~~~~l~~~~~~v~~~~~sp~g-~~l~~~~~dg~i~iwd~~-~~~~~~~~--~~~~~-~~l~~------~l~s 97 (378)
++++.+......+.+|...|.+++|+|++ ++|++|+.||.|+|||.. +.....+. +|... .+++| +|++
T Consensus 57 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 136 (383)
T 3ei3_B 57 IRSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFV 136 (383)
T ss_dssp HHHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEE
T ss_pred cccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEE
Confidence 44556667778899999999999999999 999999999999999954 45555544 57765 99999 8999
Q ss_pred EeCCCeEEEEEcCCCcEEEEEecCC---CCeeEEEEcCCCCEEEEEcCCCe-------------eeecCCCEEEEEEecC
Q 046394 98 INKLGQLRYQNVTMGEIVGNFWTGL---GRTDVIRVNPFNGVVSLGHSGGT-------------MLCHQGPVSALAFHPN 161 (378)
Q Consensus 98 ~~~d~~i~iwd~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~d~~-------------~~~h~~~v~~~~~sp~ 161 (378)
++.|+.|++||+.. ..+..+..+. ..+.+++|+|++.+|++++.|+. +.+|...|.+++|+|+
T Consensus 137 ~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 137 SSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPR 215 (383)
T ss_dssp EETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSS
T ss_pred EeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCC
Confidence 99999999999985 5555665443 78999999999999999999987 5679999999999999
Q ss_pred CC-EEEEEECCCeEEEEEcCC----ceeeeee--cCCceEEEEec-CCCc----------cccCCCCCceEEEeec----
Q 046394 162 GH-LMATSGKDCKIKIWDLRK----YEVLQTL--PGHAKTLDFSR-KDSG----------DFSGSHNYNRYMGYSM---- 219 (378)
Q Consensus 162 g~-~l~t~~~d~~i~iwd~~~----~~~~~~~--~~~i~~~~~sp-~g~~----------~~~~~~~~~~~~~~~~---- 219 (378)
+. +|++++.|+.|++||+++ +.++..+ ...+.+++|+| +|.+ .+|+.........+.+
T Consensus 216 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 295 (383)
T 3ei3_B 216 CDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHR 295 (383)
T ss_dssp CTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBC
T ss_pred CCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccc
Confidence 98 999999999999999998 6666666 47899999999 8875 5565555444444332
Q ss_pred --cCCcceeeeEEcCCCCeEEEe-cCCCeEEEEEcCCCCcccccccCCCc
Q 046394 220 --VKGYQIGKVSFRPYEDVLGIG-HSMGVSGILIPGSGEPNFDSWVANPF 266 (378)
Q Consensus 220 --~~~~~v~~~~~sp~g~~l~~~-~~~g~~~~~~~~s~d~~i~~w~~~~~ 266 (378)
.|...+. +.|+|++..++++ +.+|.. +++.|+.|++|+....
T Consensus 296 ~~~~~~~~~-~~~~p~~~~~~~~~s~dg~~----s~s~d~~i~iwd~~~~ 340 (383)
T 3ei3_B 296 QFQHLTPIK-ATWHPMYDLIVAGRYPDDQL----LLNDKRTIDIYDANSG 340 (383)
T ss_dssp CCTTSCCCC-CEECSSSSEEEEECBCCTTT----CTTCCCCEEEEETTTC
T ss_pred ccccccceE-EeccCCCCceEEEecCCccc----ccCCCCeEEEEecCCC
Confidence 1234444 5889988877655 345532 8888999999987543
No 69
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=1.3e-27 Score=215.61 Aligned_cols=211 Identities=14% Similarity=0.102 Sum_probs=180.2
Q ss_pred eecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCC---eEEeeccCCCe-eEEEE-----EEEEEeCCCeEEEEEcCC
Q 046394 41 IMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGT---ELHCSKEHGEV-LKLQF-----LLASINKLGQLRYQNVTM 111 (378)
Q Consensus 41 l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~-~~l~~-----~l~s~~~d~~i~iwd~~~ 111 (378)
+..|...|.+++|+|++++|++|+.||.|++||..+. .+..+.+|... .+++| +|++++.|+.|++||+.+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 4558899999999999999999999999999996544 77888888876 99999 899999999999999998
Q ss_pred CcEEEEE--ecCCCCeeEEEEcCCCCEEEEEcCCCe------------------eeecCCCEEEEEEecCCCEEEEEECC
Q 046394 112 GEIVGNF--WTGLGRTDVIRVNPFNGVVSLGHSGGT------------------MLCHQGPVSALAFHPNGHLMATSGKD 171 (378)
Q Consensus 112 ~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d~~------------------~~~h~~~v~~~~~sp~g~~l~t~~~d 171 (378)
++....+ ..|...+.+++|+|++.+|++++.++. ...|...|.+++|+|++++|++++.|
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 8755444 567889999999999999999999887 24578899999999999999999999
Q ss_pred CeEEEEEcC------------------Cceeeeee---cCCceEEEEecCCCc----------cccCCCCCceEEEeecc
Q 046394 172 CKIKIWDLR------------------KYEVLQTL---PGHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSMV 220 (378)
Q Consensus 172 ~~i~iwd~~------------------~~~~~~~~---~~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~~ 220 (378)
+.|++||++ .+.++..+ ...+.+++|+|++.+ .+|+.....++..+..
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~- 242 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS- 242 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC-
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc-
Confidence 999999954 57777777 367999999998864 6777777788888887
Q ss_pred CCcceeeeEEcCCCCeEEEecCCCeEEEEEcCC
Q 046394 221 KGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGS 253 (378)
Q Consensus 221 ~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~~s 253 (378)
|..+|.+++|+|++.+|++| .+|.+.+|....
T Consensus 243 ~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 243 ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 88899999999999888877 667666665433
No 70
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=2.7e-27 Score=235.27 Aligned_cols=230 Identities=13% Similarity=0.085 Sum_probs=202.0
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEEE
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQF 93 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~~ 93 (378)
...+....++.|++||+.++..+..+.+|...|.+++|+|++++|++|+.||.|++|| .++..+..+.+|.+. .+++|
T Consensus 26 ~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~ 105 (814)
T 3mkq_A 26 PWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAV 105 (814)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEE
Confidence 3455566789999999999999999999999999999999999999999999999999 567888889989876 99999
Q ss_pred -----EEEEEeCCCeEEEEEcCCC-cEEEEEecCCCCeeEEEEcC-CCCEEEEEcCCCe--------------ee-ecCC
Q 046394 94 -----LLASINKLGQLRYQNVTMG-EIVGNFWTGLGRTDVIRVNP-FNGVVSLGHSGGT--------------ML-CHQG 151 (378)
Q Consensus 94 -----~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~--------------~~-~h~~ 151 (378)
.+++++.||.|++||+.++ .....+..|...|.+++|+| ++..|++++.|+. +. .|..
T Consensus 106 s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~ 185 (814)
T 3mkq_A 106 HPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQER 185 (814)
T ss_dssp CSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTT
T ss_pred eCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCC
Confidence 8999999999999999987 67788888999999999999 8899999999987 22 3448
Q ss_pred CEEEEEEec--CCCEEEEEECCCeEEEEEcCCceeeeee---cCCceEEEEecCCCc----------cccCCCCCceEEE
Q 046394 152 PVSALAFHP--NGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSG----------DFSGSHNYNRYMG 216 (378)
Q Consensus 152 ~v~~~~~sp--~g~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g~~----------~~~~~~~~~~~~~ 216 (378)
.+.+++|+| ++.+|++++.||.|++||+.++.++..+ ...+.+++|+|+|.+ .+|+..+......
T Consensus 186 ~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 265 (814)
T 3mkq_A 186 GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT 265 (814)
T ss_dssp CCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEE
T ss_pred CEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 899999999 9999999999999999999999998888 368999999998764 6777777777777
Q ss_pred eeccCCcceeeeEEcCCCC--eEEEecCCCeE
Q 046394 217 YSMVKGYQIGKVSFRPYED--VLGIGHSMGVS 246 (378)
Q Consensus 217 ~~~~~~~~v~~~~~sp~g~--~l~~~~~~g~~ 246 (378)
+.. +...|.+++|+|+|. +++++.+++..
T Consensus 266 ~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 296 (814)
T 3mkq_A 266 LNV-GLERSWCIATHPTGRKNYIASGFDNGFT 296 (814)
T ss_dssp ECC-SSSSEEEEEECTTCGGGEEEEEETTEEE
T ss_pred eec-CCCcEEEEEEccCCCceEEEEEeCCCEE
Confidence 777 778899999999997 57777776643
No 71
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=6.9e-28 Score=220.23 Aligned_cols=233 Identities=10% Similarity=0.044 Sum_probs=185.1
Q ss_pred CCeeecCCceeeEE--Eeccceeeeeecccce----eeEEeecCCCCceEEEEcC-CCCEEEEEeCCCcEEEEeCC-C--
Q 046394 7 GGYLEAEGVEKTWR--IKQEAIAREVDILSSR----NQYDIMLPELGPYTLDFTS-SGRYMAAAGCKGYPYFYNRD-G-- 76 (378)
Q Consensus 7 ~~~l~~~~~~~~~~--~~~~~~i~~~d~~~~~----~~~~l~~~~~~v~~~~~sp-~g~~l~~~~~dg~i~iwd~~-~-- 76 (378)
..++........+. ...++.|.+|++.... ....+.+|...|.+++|+| ++.+|++|+.||.|+|||.. +
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 33444444333333 3568999999986542 3445788999999999999 99999999999999999953 3
Q ss_pred -----CeEEeeccCCCe-eEEEE------EEEEEeCCCeEEEEEcCCCcEEEEE--ecCCCCeeEEEEcCCCCEEEEEcC
Q 046394 77 -----TELHCSKEHGEV-LKLQF------LLASINKLGQLRYQNVTMGEIVGNF--WTGLGRTDVIRVNPFNGVVSLGHS 142 (378)
Q Consensus 77 -----~~~~~~~~~~~~-~~l~~------~l~s~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~ 142 (378)
..+..+.+|... .+++| +|++++.|+.|++||+.+++.+..+ ..|...|.+++|+|++.+|++++.
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec
Confidence 467788889876 99999 8999999999999999999999999 789999999999999999999999
Q ss_pred CCe--------------e-eecCCC-EEEEEEecCCCEEEEE---ECCCeEEEEEcCCcee-ee--ee--cCCceEEEEe
Q 046394 143 GGT--------------M-LCHQGP-VSALAFHPNGHLMATS---GKDCKIKIWDLRKYEV-LQ--TL--PGHAKTLDFS 198 (378)
Q Consensus 143 d~~--------------~-~~h~~~-v~~~~~sp~g~~l~t~---~~d~~i~iwd~~~~~~-~~--~~--~~~i~~~~~s 198 (378)
|+. + .+|.+. +.+++|+|++.+|+++ +.|+.|++||++++.. +. .+ ...+.+++|+
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 276 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFD 276 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEE
T ss_pred CCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEc
Confidence 987 3 567765 8999999999999999 7899999999998664 32 22 4678999999
Q ss_pred cCCCc-----------cccCCCCCce-EEEeec-cCCcceeeeEEcCCCCeEEE
Q 046394 199 RKDSG-----------DFSGSHNYNR-YMGYSM-VKGYQIGKVSFRPYEDVLGI 239 (378)
Q Consensus 199 p~g~~-----------~~~~~~~~~~-~~~~~~-~~~~~v~~~~~sp~g~~l~~ 239 (378)
|+|.+ .+|+.....+ +..+.. .+..+|.+++|+|++.++++
T Consensus 277 ~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s 330 (402)
T 2aq5_A 277 PDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN 330 (402)
T ss_dssp TTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG
T ss_pred CCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee
Confidence 98875 4444444442 222222 14578999999999977654
No 72
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=2.1e-27 Score=214.05 Aligned_cols=196 Identities=14% Similarity=0.134 Sum_probs=149.4
Q ss_pred ccceeeeeecccceeeEE----e-----ecCCCCceEEEEcCCCCEEEEEe--CCCcEEEEe-CCCCeEEeeccCCCeeE
Q 046394 23 QEAIAREVDILSSRNQYD----I-----MLPELGPYTLDFTSSGRYMAAAG--CKGYPYFYN-RDGTELHCSKEHGEVLK 90 (378)
Q Consensus 23 ~~~~i~~~d~~~~~~~~~----l-----~~~~~~v~~~~~sp~g~~l~~~~--~dg~i~iwd-~~~~~~~~~~~~~~~~~ 90 (378)
.++.+++|++.+...... . ..+...+.+++|||||++|++++ .|++|+||| .++.++..+..+..+.+
T Consensus 102 ~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~ 181 (365)
T 4h5i_A 102 GNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKD 181 (365)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCE
T ss_pred CCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEE
Confidence 467788888866533221 1 12334578999999999887654 689999999 55666777765555699
Q ss_pred EEE-----EEEEEeCCCeEEEEEcCCCcEEEE--EecCCCCeeEEEEcCCCCEEEEEcCCCe------------------
Q 046394 91 LQF-----LLASINKLGQLRYQNVTMGEIVGN--FWTGLGRTDVIRVNPFNGVVSLGHSGGT------------------ 145 (378)
Q Consensus 91 l~~-----~l~s~~~d~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~d~~------------------ 145 (378)
++| ++++++. +.+.+|+..++..+.. ...|...+.+++|+|++.++++++.++.
T Consensus 182 v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~ 260 (365)
T 4h5i_A 182 LHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVL 260 (365)
T ss_dssp EEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEE
T ss_pred EEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecce
Confidence 999 7888775 5577777777776543 3356778999999999999999987763
Q ss_pred ----eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeeecCCceEEEEecCCCccccCCCCCceEEEeeccC
Q 046394 146 ----MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKDSGDFSGSHNYNRYMGYSMVK 221 (378)
Q Consensus 146 ----~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~~~~~~~~~~ 221 (378)
+.+|...|++++|+|+|++||+|+.|++|+|||+.+++++.++ ..+ |
T Consensus 261 ~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~----------------------------~~g-H 311 (365)
T 4h5i_A 261 RSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF----------------------------KQA-H 311 (365)
T ss_dssp EEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE----------------------------TTS-S
T ss_pred eeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe----------------------------cCc-c
Confidence 4578899999999999999999999999999999887654321 234 8
Q ss_pred CcceeeeEEcCCCCeEEEecCCCeEEE
Q 046394 222 GYQIGKVSFRPYEDVLGIGHSMGVSGI 248 (378)
Q Consensus 222 ~~~v~~~~~sp~g~~l~~~~~~g~~~~ 248 (378)
..+|++|+|+|||++||+|+.|+.+++
T Consensus 312 ~~~V~~v~fSpdg~~laS~S~D~tvrv 338 (365)
T 4h5i_A 312 SFAITEVTISPDSTYVASVSAANTIHI 338 (365)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred cCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 889999999999977766666654333
No 73
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.6e-27 Score=220.17 Aligned_cols=233 Identities=12% Similarity=0.114 Sum_probs=179.8
Q ss_pred ceeeEEEeccceeeeeeccc---ce---eeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeC----CCCeEEeecc
Q 046394 15 VEKTWRIKQEAIAREVDILS---SR---NQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNR----DGTELHCSKE 84 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~---~~---~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~----~~~~~~~~~~ 84 (378)
....+..+.|+.|++||+.+ +. ....+ .|...|.+++|+|++.+|++|+.||.|++||+ .+..+..+..
T Consensus 76 ~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 154 (437)
T 3gre_A 76 TPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNC 154 (437)
T ss_dssp SCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEE
T ss_pred CCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeecccc
Confidence 44566777899999999987 33 23333 48899999999999999999999999999996 4444332221
Q ss_pred ------------CCC-eeEEEE-------EEEEEeCCCeEEEEEcCCCcEEEEEec--CCCCeeEEEEcCCCCEEEEEcC
Q 046394 85 ------------HGE-VLKLQF-------LLASINKLGQLRYQNVTMGEIVGNFWT--GLGRTDVIRVNPFNGVVSLGHS 142 (378)
Q Consensus 85 ------------~~~-~~~l~~-------~l~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~ 142 (378)
+.. +.++.+ ++++++.|+.|++||+.+++++..+.. |...|.+++|+|++.+|++|+.
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 234 (437)
T 3gre_A 155 ECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTT 234 (437)
T ss_dssp EEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEET
T ss_pred ceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcC
Confidence 222 366664 899999999999999999999999988 7899999999999999999999
Q ss_pred CCe--------------ee-ecCCCEEEEEEec----CCCEEEEEECCCeEEEEEcCCceeeeee--c------------
Q 046394 143 GGT--------------ML-CHQGPVSALAFHP----NGHLMATSGKDCKIKIWDLRKYEVLQTL--P------------ 189 (378)
Q Consensus 143 d~~--------------~~-~h~~~v~~~~~sp----~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~------------ 189 (378)
|+. +. .|..+|.+++|+| ++.+|++++.|+.|+|||+++++++..+ +
T Consensus 235 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (437)
T 3gre_A 235 RGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPI 314 (437)
T ss_dssp TSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCB
T ss_pred CCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccc
Confidence 997 22 6777899996664 6789999999999999999999887766 1
Q ss_pred ---------------CCceEEEEecCCC----------ccccCCCCCceEEEeecc------------------------
Q 046394 190 ---------------GHAKTLDFSRKDS----------GDFSGSHNYNRYMGYSMV------------------------ 220 (378)
Q Consensus 190 ---------------~~i~~~~~sp~g~----------~~~~~~~~~~~~~~~~~~------------------------ 220 (378)
..|++++|+ ++. ..+|+.........+.++
T Consensus 315 ~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (437)
T 3gre_A 315 EKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMK 393 (437)
T ss_dssp CSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC
T ss_pred ccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecc
Confidence 126677777 333 367776666555444431
Q ss_pred ------------CCcceeeeEEcCC--CCeEEEecCCCeEEEE
Q 046394 221 ------------KGYQIGKVSFRPY--EDVLGIGHSMGVSGIL 249 (378)
Q Consensus 221 ------------~~~~v~~~~~sp~--g~~l~~~~~~g~~~~~ 249 (378)
|...|++++|+++ +.+|++|+.||.+.+|
T Consensus 394 ~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw 436 (437)
T 3gre_A 394 RTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIF 436 (437)
T ss_dssp -------------CCCEEEEEEEESSSSEEEEEEETTSCEEEE
T ss_pred cccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEe
Confidence 6778999999988 6677777777766555
No 74
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=3.3e-27 Score=218.00 Aligned_cols=222 Identities=12% Similarity=0.111 Sum_probs=186.5
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEE
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQ 92 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~ 92 (378)
....+....++.|++||+.+++....+.+|...|.+++| ++++|++|+.||.|++|| .++..+..+.+|... .++.
T Consensus 143 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~ 220 (435)
T 1p22_A 143 DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLR 220 (435)
T ss_dssp SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEE
Confidence 455677788999999999999999999999999999998 688999999999999999 567888899999876 9999
Q ss_pred E---EEEEEeCCCeEEEEEcCCCcEE---EEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCC
Q 046394 93 F---LLASINKLGQLRYQNVTMGEIV---GNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGP 152 (378)
Q Consensus 93 ~---~l~s~~~d~~i~iwd~~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~ 152 (378)
| .+++|+.|+.|++||+.++... ..+..|...|.+++| ++.++++|+.|+. +.+|...
T Consensus 221 ~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 298 (435)
T 1p22_A 221 FNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 298 (435)
T ss_dssp CCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred EcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCc
Confidence 9 9999999999999999987654 667788999999999 7899999999997 6679999
Q ss_pred EEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee---cCCceEEEEec--------CCCccccCCCCCc---------
Q 046394 153 VSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSR--------KDSGDFSGSHNYN--------- 212 (378)
Q Consensus 153 v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp--------~g~~~~~~~~~~~--------- 212 (378)
|.+++|+ ++++++|+.||.|++||+++++++..+ ...+.+++|++ ||...+|+.....
T Consensus 299 v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 376 (435)
T 1p22_A 299 IACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTL 376 (435)
T ss_dssp EEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTT
T ss_pred EEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCCCCccccccch
Confidence 9999995 679999999999999999999999888 36788887733 4555677654333
Q ss_pred eEEEeeccCCcceeeeEEcCCCCeEEEecCCCe
Q 046394 213 RYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGV 245 (378)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~ 245 (378)
.+..+.+ |..+|++++| ++.+|++|+.||.
T Consensus 377 ~~~~~~~-h~~~v~~l~~--~~~~l~s~s~Dg~ 406 (435)
T 1p22_A 377 CLRTLVE-HSGRVFRLQF--DEFQIVSSSHDDT 406 (435)
T ss_dssp EEEEECC-CSSCCCCEEE--CSSCEEECCSSSE
T ss_pred heeeccC-CCCCeEEEEe--CCCEEEEEeCCCE
Confidence 5666767 8889999999 6655555554443
No 75
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.96 E-value=2.8e-26 Score=213.39 Aligned_cols=230 Identities=12% Similarity=0.014 Sum_probs=193.9
Q ss_pred eeEEEeccceeeeeecccceeeEEeecCCCCceEEEEc--CCCCEEEEEeCCCcEEEEeCCCC-----------------
Q 046394 17 KTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFT--SSGRYMAAAGCKGYPYFYNRDGT----------------- 77 (378)
Q Consensus 17 ~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~s--p~g~~l~~~~~dg~i~iwd~~~~----------------- 77 (378)
..+....|+.|++||+.+++.+..+.+|...|.+++|+ +++.+|++|+.||.|++||....
T Consensus 175 ~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 254 (464)
T 3v7d_B 175 ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFH 254 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEES
T ss_pred EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEee
Confidence 66777889999999999999999999999999999998 57789999999999999995432
Q ss_pred -------eEEeeccCCCe-eEEEE---EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe-
Q 046394 78 -------ELHCSKEHGEV-LKLQF---LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT- 145 (378)
Q Consensus 78 -------~~~~~~~~~~~-~~l~~---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~- 145 (378)
.+..+.+|... .++.. ++++++.|+.|++||+.+++++..+..|...|.+++|+|++.++++++.|+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i 334 (464)
T 3v7d_B 255 TPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTI 334 (464)
T ss_dssp CGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred ccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Confidence 14566777765 77766 9999999999999999999999999999999999999999999999999997
Q ss_pred -------------eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--cCCceEEEEecCCCc-------
Q 046394 146 -------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSG------- 203 (378)
Q Consensus 146 -------------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~------- 203 (378)
+.+|...|.+++|+ +.+|++++.||+|++||+.++.....+ ...+..++|+|++.+
T Consensus 335 ~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~dg 412 (464)
T 3v7d_B 335 RIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSEN 412 (464)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEETT
T ss_pred EEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEecCC
Confidence 66899999999997 579999999999999999998877666 456778888887764
Q ss_pred --cccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEE
Q 046394 204 --DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGIL 249 (378)
Q Consensus 204 --~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~ 249 (378)
.+|+..++..+......|...|.+++|+ .+.++++++.+|...++
T Consensus 413 ~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 413 QFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp EEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred eEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 7788878877765333378899999997 34555666667755444
No 76
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=7.1e-27 Score=216.17 Aligned_cols=229 Identities=10% Similarity=0.045 Sum_probs=177.2
Q ss_pred ceeeEEEeccceeeeeecccce-----------eeEEeecCC------------CCceEEEEcCCC--CEEEEEeCCCcE
Q 046394 15 VEKTWRIKQEAIAREVDILSSR-----------NQYDIMLPE------------LGPYTLDFTSSG--RYMAAAGCKGYP 69 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~-----------~~~~l~~~~------------~~v~~~~~sp~g--~~l~~~~~dg~i 69 (378)
....+....++.|++||+.++. ....+.+|. ..|.+++|+|++ .+|++++.||.|
T Consensus 40 g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i 119 (447)
T 3dw8_B 40 GELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTI 119 (447)
T ss_dssp SSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCE
T ss_pred CCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeE
Confidence 3445666778999999999887 477889998 889999999998 799999999999
Q ss_pred EEEeCCCCeE----------------------------------------Ee-eccCCCe-eEEEE-----EEEEEeCCC
Q 046394 70 YFYNRDGTEL----------------------------------------HC-SKEHGEV-LKLQF-----LLASINKLG 102 (378)
Q Consensus 70 ~iwd~~~~~~----------------------------------------~~-~~~~~~~-~~l~~-----~l~s~~~d~ 102 (378)
++||...... .. ..+|... .+++| +|++| .|+
T Consensus 120 ~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~ 198 (447)
T 3dw8_B 120 KLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDL 198 (447)
T ss_dssp EEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSS
T ss_pred EEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCC
Confidence 9999543111 12 3567765 99999 88888 799
Q ss_pred eEEEEEcCC-CcEEEE-------EecCCCCeeEEEEcCCC-CEEEEEcCCCe------------------eeecCC----
Q 046394 103 QLRYQNVTM-GEIVGN-------FWTGLGRTDVIRVNPFN-GVVSLGHSGGT------------------MLCHQG---- 151 (378)
Q Consensus 103 ~i~iwd~~~-~~~~~~-------~~~~~~~v~~~~~s~~~-~~l~~~~~d~~------------------~~~h~~---- 151 (378)
.|++||+.+ ++.+.. +..|...|.+++|+|++ .+|++++.|+. +..|..
T Consensus 199 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 278 (447)
T 3dw8_B 199 RINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNR 278 (447)
T ss_dssp EEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----C
T ss_pred eEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCcccc
Confidence 999999984 444442 45788899999999999 99999999987 334444
Q ss_pred --------CEEEEEEecCCCEEEEEECCCeEEEEEcCC-ceeeeee--cCC----------------ceEEEEecCCCc-
Q 046394 152 --------PVSALAFHPNGHLMATSGKDCKIKIWDLRK-YEVLQTL--PGH----------------AKTLDFSRKDSG- 203 (378)
Q Consensus 152 --------~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~-~~~~~~~--~~~----------------i~~~~~sp~g~~- 203 (378)
.|.+++|+|+|++|++++. +.|+|||+++ ++++..+ +.. +..++|+|+|.+
T Consensus 279 ~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l 357 (447)
T 3dw8_B 279 SFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV 357 (447)
T ss_dssp CHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE
T ss_pred ccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEE
Confidence 8999999999999999999 9999999997 8887777 333 223999999875
Q ss_pred ---------cccCCCCCceEEEee-------------------------------ccCCcceeeeEEcCCCCeEEEecCC
Q 046394 204 ---------DFSGSHNYNRYMGYS-------------------------------MVKGYQIGKVSFRPYEDVLGIGHSM 243 (378)
Q Consensus 204 ---------~~~~~~~~~~~~~~~-------------------------------~~~~~~v~~~~~sp~g~~l~~~~~~ 243 (378)
.+|+......+.... ......|..++|+|+|.+||+++.+
T Consensus 358 ~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~ 437 (447)
T 3dw8_B 358 MTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTN 437 (447)
T ss_dssp EEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSS
T ss_pred EEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecc
Confidence 566665554432110 0123568899999999999999998
Q ss_pred Ce
Q 046394 244 GV 245 (378)
Q Consensus 244 g~ 245 (378)
+.
T Consensus 438 ~~ 439 (447)
T 3dw8_B 438 NL 439 (447)
T ss_dssp CE
T ss_pred ee
Confidence 74
No 77
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.96 E-value=5.9e-26 Score=210.20 Aligned_cols=232 Identities=11% Similarity=0.133 Sum_probs=199.3
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEE
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQ 92 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~ 92 (378)
....+....++.|++||+.+++.+..+.+|...|.+++|+ +.+|++|+.||.|++|| .++..+..+.+|... .++.
T Consensus 129 g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~ 206 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH 206 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEE
Confidence 3456777889999999999999999999999999999998 56999999999999999 567778889999876 9999
Q ss_pred E---EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCCEEE
Q 046394 93 F---LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPVSA 155 (378)
Q Consensus 93 ~---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~v~~ 155 (378)
| .+++++.|++|++||+.+++.+..+..|...+.+++| ++.++++++.|+. +.+|...|.+
T Consensus 207 ~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 284 (445)
T 2ovr_B 207 LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 284 (445)
T ss_dssp EETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEE
T ss_pred ecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEE
Confidence 9 9999999999999999999999999999999999999 7889999999987 5678999999
Q ss_pred EEEecCCCEEEEEECCCeEEEEEcCCceeeeee---cCCceEEEEec--------CCCccccCCCCCceEEEeec--cCC
Q 046394 156 LAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSR--------KDSGDFSGSHNYNRYMGYSM--VKG 222 (378)
Q Consensus 156 ~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp--------~g~~~~~~~~~~~~~~~~~~--~~~ 222 (378)
++| ++.++++++.|+.|++||+++++++..+ ...+.++.+++ ||...+|+..+..++..+.. .|.
T Consensus 285 ~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 362 (445)
T 2ovr_B 285 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 362 (445)
T ss_dssp EEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCS
T ss_pred EEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCC
Confidence 999 7889999999999999999999998888 35566666543 56678898888887777754 266
Q ss_pred cceeeeEEcCCCCeEEEecCCCeEEEEEcCCC
Q 046394 223 YQIGKVSFRPYEDVLGIGHSMGVSGILIPGSG 254 (378)
Q Consensus 223 ~~v~~~~~sp~g~~l~~~~~~g~~~~~~~~s~ 254 (378)
.+|+++.|+ +.+|++|+.||.+.+|...++
T Consensus 363 ~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 363 SAVTCLQFN--KNFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp SCEEEEEEC--SSEEEEEETTSEEEEEETTTC
T ss_pred CCEEEEEEC--CCEEEEEeCCCeEEEEECCCC
Confidence 789999995 578888888887777654433
No 78
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=1.1e-27 Score=221.15 Aligned_cols=227 Identities=15% Similarity=0.126 Sum_probs=174.5
Q ss_pred eEEeecCCCCceEEEEcC-CCCEEEEEeCCCcEEEEeCC-C--CeEEeeccCCCe-eEEEE------EEEEEeCCCeEEE
Q 046394 38 QYDIMLPELGPYTLDFTS-SGRYMAAAGCKGYPYFYNRD-G--TELHCSKEHGEV-LKLQF------LLASINKLGQLRY 106 (378)
Q Consensus 38 ~~~l~~~~~~v~~~~~sp-~g~~l~~~~~dg~i~iwd~~-~--~~~~~~~~~~~~-~~l~~------~l~s~~~d~~i~i 106 (378)
......|...|+||+|+| ++++||+|+.||.|+|||.. + .....+.+|.+. ++++| +|++|+.|++|++
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 445677888999999999 56799999999999999953 3 234556788876 99999 8999999999999
Q ss_pred EEcCCCcEEEEEec--CCCCeeEEEEcCCCCEEEEEcCCCe-------------eeecCCCEEEEEEecCCC-EEEEEEC
Q 046394 107 QNVTMGEIVGNFWT--GLGRTDVIRVNPFNGVVSLGHSGGT-------------MLCHQGPVSALAFHPNGH-LMATSGK 170 (378)
Q Consensus 107 wd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d~~-------------~~~h~~~v~~~~~sp~g~-~l~t~~~ 170 (378)
||+.++........ +...+.+++|+|++.+|++|+.++. +.+|...|++++|+|++. +|++++.
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEET
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecC
Confidence 99977654333332 2345788999999999999999987 678999999999999875 7889999
Q ss_pred CCeEEEEEcCCceeeeee------cCCceEEEEecCCCc----------cccCCCCCceEEEeeccCC------cceeee
Q 046394 171 DCKIKIWDLRKYEVLQTL------PGHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSMVKG------YQIGKV 228 (378)
Q Consensus 171 d~~i~iwd~~~~~~~~~~------~~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~~~~------~~v~~~ 228 (378)
|++|+|||++++.....+ ...|++++|+|+|.+ .+|+............ |. ..+..+
T Consensus 272 d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~ 350 (435)
T 4e54_B 272 DQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIP-HPHRHFQHLTPIKA 350 (435)
T ss_dssp TSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECC-CCCCCCSSSCCCBC
T ss_pred cceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEec-ccccccccceeEEE
Confidence 999999999987654433 367999999998875 5666655554444433 22 124567
Q ss_pred EEcCCCCeEEEecCCCeEEEEEcCCCCcccccccCCC
Q 046394 229 SFRPYEDVLGIGHSMGVSGILIPGSGEPNFDSWVANP 265 (378)
Q Consensus 229 ~~sp~g~~l~~~~~~g~~~~~~~~s~d~~i~~w~~~~ 265 (378)
.|+|++.+++++..+....++..+..++.|++|+...
T Consensus 351 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~ 387 (435)
T 4e54_B 351 AWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNS 387 (435)
T ss_dssp EECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSS
T ss_pred EEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCC
Confidence 8999999888876533223445566677899998754
No 79
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.1e-26 Score=202.56 Aligned_cols=209 Identities=12% Similarity=0.041 Sum_probs=178.8
Q ss_pred eeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeC-CCCeEEeeccCCCe-eEEEE-----EEEEEeCCCeEEEEE
Q 046394 36 RNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNR-DGTELHCSKEHGEV-LKLQF-----LLASINKLGQLRYQN 108 (378)
Q Consensus 36 ~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~-~~~~~~~~~~~~~~-~~l~~-----~l~s~~~d~~i~iwd 108 (378)
+....+.+|...|.+++| |++.+|++|+.||.|++||. ++.....+..|... .+++| ++++++.|+.|++|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 667889999999999999 99999999999999999994 55566778888775 99999 999999999999999
Q ss_pred cCCC---cEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe------------eeecCCCEEEEEEec-CCCEEEEEECCC
Q 046394 109 VTMG---EIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT------------MLCHQGPVSALAFHP-NGHLMATSGKDC 172 (378)
Q Consensus 109 ~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~------------~~~h~~~v~~~~~sp-~g~~l~t~~~d~ 172 (378)
+... +.+..+..|...+.++.| ++.++++++.++. +..|...|.+++|+| +++++++++.|+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 165 (313)
T 3odt_A 88 LFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADK 165 (313)
T ss_dssp TTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTS
T ss_pred eeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCC
Confidence 8764 567788889999999999 6789999999987 567999999999999 999999999999
Q ss_pred eEEEEEcCCceeeeee----cCCceEEEEecCCCc---------cccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEE
Q 046394 173 KIKIWDLRKYEVLQTL----PGHAKTLDFSRKDSG---------DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGI 239 (378)
Q Consensus 173 ~i~iwd~~~~~~~~~~----~~~i~~~~~sp~g~~---------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~ 239 (378)
.|++||. ...+..+ ...+.+++|+|++.+ .+|+.....++..+.+ |..+|++++|+|++ .|++
T Consensus 166 ~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~ 241 (313)
T 3odt_A 166 TIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEG-HESFVYCIKLLPNG-DIVS 241 (313)
T ss_dssp CEEEEET--TEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTS-CEEE
T ss_pred CEEEEec--CceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhc-CCceEEEEEEecCC-CEEE
Confidence 9999994 4444444 467899999998763 6788888888888888 88999999999999 6888
Q ss_pred ecCCCeEEEEEc
Q 046394 240 GHSMGVSGILIP 251 (378)
Q Consensus 240 ~~~~g~~~~~~~ 251 (378)
++.||.+.+|..
T Consensus 242 ~~~dg~v~iwd~ 253 (313)
T 3odt_A 242 CGEDRTVRIWSK 253 (313)
T ss_dssp EETTSEEEEECT
T ss_pred EecCCEEEEEEC
Confidence 888887776643
No 80
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=4.2e-27 Score=209.82 Aligned_cols=224 Identities=8% Similarity=-0.017 Sum_probs=191.0
Q ss_pred eeeEEEeccceeeeeecccce---eeEEeecCCCCceEEEEcCCCC-EEEEEeCCCcEEEEeC-CCCeEEeecc--CCCe
Q 046394 16 EKTWRIKQEAIAREVDILSSR---NQYDIMLPELGPYTLDFTSSGR-YMAAAGCKGYPYFYNR-DGTELHCSKE--HGEV 88 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~---~~~~l~~~~~~v~~~~~sp~g~-~l~~~~~dg~i~iwd~-~~~~~~~~~~--~~~~ 88 (378)
...+....++.|++||+.++. ....+..|...|.+++|+|++. +|++|+.||.|++||. .......+.+ |...
T Consensus 24 ~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~ 103 (342)
T 1yfq_A 24 SLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLG 103 (342)
T ss_dssp TEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSC
T ss_pred CEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCc
Confidence 445666788999999998887 3456668999999999999999 9999999999999998 8888888888 8876
Q ss_pred -eEEEE----EEEEEeCCCeEEEEEcCC---------CcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe---------
Q 046394 89 -LKLQF----LLASINKLGQLRYQNVTM---------GEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------- 145 (378)
Q Consensus 89 -~~l~~----~l~s~~~d~~i~iwd~~~---------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------- 145 (378)
.+++| .+++++.|+.|++||+.+ ++++..+. +...+.+++|+|++ +++++.++.
T Consensus 104 v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~ 180 (342)
T 1yfq_A 104 ICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLC 180 (342)
T ss_dssp EEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCC
T ss_pred eEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCcc
Confidence 99999 899999999999999987 66666665 77899999999988 888887765
Q ss_pred --------eeecCCCEEEEEEec-CCCEEEEEECCCeEEEEEcCCc------eeeeee--c-C---------CceEEEEe
Q 046394 146 --------MLCHQGPVSALAFHP-NGHLMATSGKDCKIKIWDLRKY------EVLQTL--P-G---------HAKTLDFS 198 (378)
Q Consensus 146 --------~~~h~~~v~~~~~sp-~g~~l~t~~~d~~i~iwd~~~~------~~~~~~--~-~---------~i~~~~~s 198 (378)
...|...|.+++|+| ++++|++++.||.|++||+... .....+ + . .+.+++|+
T Consensus 181 ~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 260 (342)
T 1yfq_A 181 EDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFS 260 (342)
T ss_dssp TTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEEC
T ss_pred ccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEc
Confidence 224677899999999 9999999999999999999876 666666 2 2 89999999
Q ss_pred cCCCc----------cccCCCCCceEEEeeccC-CcceeeeEEcCCCCeEEEecCCCe
Q 046394 199 RKDSG----------DFSGSHNYNRYMGYSMVK-GYQIGKVSFRPYEDVLGIGHSMGV 245 (378)
Q Consensus 199 p~g~~----------~~~~~~~~~~~~~~~~~~-~~~v~~~~~sp~g~~l~~~~~~g~ 245 (378)
|+|.+ .+|+..+...+..+.. | ..+|++++ |+|.+|++++.||.
T Consensus 261 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 261 PRHKFLYTAGSDGIISCWNLQTRKKIKNFAK-FNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp TTTCCEEEEETTSCEEEEETTTTEEEEECCC-CSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred CCCCEEEEecCCceEEEEcCccHhHhhhhhc-ccCCCceEec--CCCCeEEEEecCCc
Confidence 98874 6788888888888877 6 89999999 99988888888773
No 81
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=5.4e-27 Score=216.95 Aligned_cols=209 Identities=13% Similarity=0.119 Sum_probs=167.6
Q ss_pred CCCCceEEEEcCCCCEEEEEeCCCcEEEEeCC-CC-----------eEEeeccCC------------Ce-eEEEE-----
Q 046394 44 PELGPYTLDFTSSGRYMAAAGCKGYPYFYNRD-GT-----------ELHCSKEHG------------EV-LKLQF----- 93 (378)
Q Consensus 44 ~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~-~~-----------~~~~~~~~~------------~~-~~l~~----- 93 (378)
+.+.|.+++|+|+|++||+|+.||.|+|||.. +. ....+.+|. +. ++++|
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 45789999999999999999999999999944 33 367788896 54 99999
Q ss_pred --EEEEEeCCCeEEEEEcCCCcEE---------------------------------------EE-EecCCCCeeEEEEc
Q 046394 94 --LLASINKLGQLRYQNVTMGEIV---------------------------------------GN-FWTGLGRTDVIRVN 131 (378)
Q Consensus 94 --~l~s~~~d~~i~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~s 131 (378)
.|++++.|++|++||+.++... .. ...|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 6999999999999999764432 12 35688999999999
Q ss_pred CCCCEEEEEcCCCe------------e----------eecCCCEEEEEEecCC-CEEEEEECCCeEEEEEcCCcee----
Q 046394 132 PFNGVVSLGHSGGT------------M----------LCHQGPVSALAFHPNG-HLMATSGKDCKIKIWDLRKYEV---- 184 (378)
Q Consensus 132 ~~~~~l~~~~~d~~------------~----------~~h~~~v~~~~~sp~g-~~l~t~~~d~~i~iwd~~~~~~---- 184 (378)
|++.+|++| .|+. + .+|...|.+++|+|++ ++|++++.||.|++||++++..
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 265 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH 265 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccce
Confidence 999999998 6776 1 2688999999999998 9999999999999999999886
Q ss_pred eeee--c-C------------CceEEEEecCCCc---------cccCCCC-CceEEEeeccCCcc---------------
Q 046394 185 LQTL--P-G------------HAKTLDFSRKDSG---------DFSGSHN-YNRYMGYSMVKGYQ--------------- 224 (378)
Q Consensus 185 ~~~~--~-~------------~i~~~~~sp~g~~---------~~~~~~~-~~~~~~~~~~~~~~--------------- 224 (378)
+..+ + . .+.+++|+|+|.+ .+|+... ..++..+.+ |...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~i~~ 344 (447)
T 3dw8_B 266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQV-HEYLRSKLCSLYENDCIFD 344 (447)
T ss_dssp CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEES-CGGGTTTHHHHHHTSGGGC
T ss_pred eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeec-ccccccccccccccccccc
Confidence 5666 3 2 8999999999886 4566554 555555555 4321
Q ss_pred eeeeEEcCCCCeEEEecCCCeEEEEEcCCC
Q 046394 225 IGKVSFRPYEDVLGIGHSMGVSGILIPGSG 254 (378)
Q Consensus 225 v~~~~~sp~g~~l~~~~~~g~~~~~~~~s~ 254 (378)
+..++|+|+|.+|++|+.||.+.+|...++
T Consensus 345 ~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 345 KFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp CCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred ceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 234899999999999998888777765443
No 82
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.95 E-value=5.2e-26 Score=210.55 Aligned_cols=224 Identities=12% Similarity=0.096 Sum_probs=195.1
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEEE
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQF 93 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~~ 93 (378)
...+....|+.|++||+.+++.+..+.+|...|.+++|+ +.+|++|+.||.|++|| .++..+..+.+|... .++.|
T Consensus 170 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 247 (445)
T 2ovr_B 170 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 247 (445)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE
Confidence 345666778999999999999999999999999999996 56899999999999999 567788889999876 99999
Q ss_pred ---EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCCEEEE
Q 046394 94 ---LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPVSAL 156 (378)
Q Consensus 94 ---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~v~~~ 156 (378)
.+++++.|+.|++||+.+++++..+..|...+.++.| ++.++++++.|+. +.+|...+.++
T Consensus 248 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~ 325 (445)
T 2ovr_B 248 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 325 (445)
T ss_dssp CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEE
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEE
Confidence 9999999999999999999999999999999999999 8899999999987 56788888888
Q ss_pred EEecCCCEEEEEECCCeEEEEEcCCceeeeee------cCCceEEEEec--------CCCccccCCCCCceEEEee----
Q 046394 157 AFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL------PGHAKTLDFSR--------KDSGDFSGSHNYNRYMGYS---- 218 (378)
Q Consensus 157 ~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~------~~~i~~~~~sp--------~g~~~~~~~~~~~~~~~~~---- 218 (378)
.++ +++|++++.||.|++||+++++++..+ ...+.+++|++ ||...+|+..++..+..+.
T Consensus 326 ~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 403 (445)
T 2ovr_B 326 ELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLES 403 (445)
T ss_dssp EEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEECTT
T ss_pred EEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceeeeeecccc
Confidence 775 669999999999999999999988887 24688888865 5566889888888777662
Q ss_pred ccCCcceeeeEEcCCCCeEEEecCCCe
Q 046394 219 MVKGYQIGKVSFRPYEDVLGIGHSMGV 245 (378)
Q Consensus 219 ~~~~~~v~~~~~sp~g~~l~~~~~~g~ 245 (378)
..+...|++++|+|+|.+|++|+.||.
T Consensus 404 ~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 404 GGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp GGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred CCCCceEEEEEecCCEEEEEEcccCCC
Confidence 127788999999999988888888874
No 83
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=3.8e-26 Score=205.34 Aligned_cols=225 Identities=8% Similarity=0.014 Sum_probs=181.6
Q ss_pred eeeEEEeccceeeeeeccc-ceee-EEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccCCCe-eEEE
Q 046394 16 EKTWRIKQEAIAREVDILS-SRNQ-YDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEV-LKLQ 92 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~-~~~~-~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~l~ 92 (378)
...+....++.|++||+.+ +... ..+.+|...|.+++|+|++++|++|+.||.|++||........+..|... .+++
T Consensus 55 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~ 134 (368)
T 3mmy_A 55 NFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIH 134 (368)
T ss_dssp EEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEE
T ss_pred eEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEE
Confidence 5667777899999999997 5444 77889999999999999999999999999999999766666667777765 8888
Q ss_pred E-------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe----------------eeec
Q 046394 93 F-------LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT----------------MLCH 149 (378)
Q Consensus 93 ~-------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~----------------~~~h 149 (378)
| +|++++.|+.|++||+.+++.+..+..+ ..+.++.+.+ ..+++++.++. ...+
T Consensus 135 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 211 (368)
T 3mmy_A 135 WIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP-ERCYCADVIY--PMAVVATAERGLIVYQLENQPSEFRRIESPL 211 (368)
T ss_dssp EEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS-SCEEEEEEET--TEEEEEEGGGCEEEEECSSSCEEEEECCCSC
T ss_pred EEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC-CCceEEEecC--CeeEEEeCCCcEEEEEeccccchhhhccccc
Confidence 7 7999999999999999999988888765 3555665554 46666666655 1123
Q ss_pred CCCEEEEEEecCCCE----EEEEECCCeEEEEEcCCc---eeeeee--cC-------------CceEEEEecCCCc----
Q 046394 150 QGPVSALAFHPNGHL----MATSGKDCKIKIWDLRKY---EVLQTL--PG-------------HAKTLDFSRKDSG---- 203 (378)
Q Consensus 150 ~~~v~~~~~sp~g~~----l~t~~~d~~i~iwd~~~~---~~~~~~--~~-------------~i~~~~~sp~g~~---- 203 (378)
...+.++++.+++.. +++++.|+.|++||++.. ..+..+ +. .+++++|+|+|.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~ 291 (368)
T 3mmy_A 212 KHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATV 291 (368)
T ss_dssp SSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEE
T ss_pred cCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEE
Confidence 455677777765554 999999999999999986 445555 22 6999999998865
Q ss_pred ------cccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCC
Q 046394 204 ------DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMG 244 (378)
Q Consensus 204 ------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g 244 (378)
.+|+.....++..+.. |..+|++++|+|+|.+|++++.++
T Consensus 292 ~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 292 GSDGRFSFWDKDARTKLKTSEQ-LDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp ETTSCEEEEETTTTEEEEECCC-CSSCEEEEEECTTSSCEEEEECCC
T ss_pred ccCCeEEEEECCCCcEEEEecC-CCCCceEEEECCCCCeEEEEeccc
Confidence 7788888888888877 889999999999999999998876
No 84
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=4.2e-26 Score=210.25 Aligned_cols=218 Identities=13% Similarity=0.183 Sum_probs=171.9
Q ss_pred eeeEEEeccceeeeeeccc----------ceeeEEeecCCCCceEEEEcCCCC-EEEEEeCCCcEEEEeCCC-----Ce-
Q 046394 16 EKTWRIKQEAIAREVDILS----------SRNQYDIMLPELGPYTLDFTSSGR-YMAAAGCKGYPYFYNRDG-----TE- 78 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~----------~~~~~~l~~~~~~v~~~~~sp~g~-~l~~~~~dg~i~iwd~~~-----~~- 78 (378)
...+....++.|++||+.+ ......+.+|...|++++|+|++. +|++|+.||.|++||+.. ..
T Consensus 142 ~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 221 (430)
T 2xyi_A 142 CVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVI 221 (430)
T ss_dssp EEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEE
T ss_pred cEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCcee
Confidence 3455556789999999987 678889999999999999999998 999999999999999643 11
Q ss_pred --EEeeccCCCe-eEEEE------EEEEEeCCCeEEEEEcCCC---cEEEEEecCCCCeeEEEEcCCCC-EEEEEcCCCe
Q 046394 79 --LHCSKEHGEV-LKLQF------LLASINKLGQLRYQNVTMG---EIVGNFWTGLGRTDVIRVNPFNG-VVSLGHSGGT 145 (378)
Q Consensus 79 --~~~~~~~~~~-~~l~~------~l~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~ 145 (378)
...+.+|... .+++| +|++++.|+.|++||++++ ..+..+..|...|++++|+|++. +|++|+.++.
T Consensus 222 ~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~ 301 (430)
T 2xyi_A 222 DAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKT 301 (430)
T ss_dssp ECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred ccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCe
Confidence 3556678765 99999 8999999999999999987 56777888889999999999886 7889988887
Q ss_pred ---------------eeecCCCEEEEEEecCCC-EEEEEECCCeEEEEEcCCceeeeeecCCceEEEEecCCCccccCCC
Q 046394 146 ---------------MLCHQGPVSALAFHPNGH-LMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKDSGDFSGSH 209 (378)
Q Consensus 146 ---------------~~~h~~~v~~~~~sp~g~-~l~t~~~d~~i~iwd~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~ 209 (378)
+..|...|.+++|+|++. +|++++.|+.|+|||+........... ....
T Consensus 302 v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---------------~~~~ 366 (430)
T 2xyi_A 302 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED---------------AEDG 366 (430)
T ss_dssp EEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHH---------------HHHC
T ss_pred EEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccc---------------cccC
Confidence 567889999999999884 689999999999999976321110000 0001
Q ss_pred CCceEEEeeccCCcceeeeEEcCCCC-eEEEecCCCeEEEE
Q 046394 210 NYNRYMGYSMVKGYQIGKVSFRPYED-VLGIGHSMGVSGIL 249 (378)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~~~~g~~~~~ 249 (378)
....+..+.+ |...|++++|+|++. +|++++.||.+.+|
T Consensus 367 ~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw 406 (430)
T 2xyi_A 367 PPELLFIHGG-HTAKISDFSWNPNEPWIICSVSEDNIMQVW 406 (430)
T ss_dssp CTTEEEECCC-CSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred CcceEEEcCC-CCCCceEEEECCCCCCEEEEEECCCCEEEe
Confidence 2345666666 888899999999998 67777666655444
No 85
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.5e-26 Score=213.01 Aligned_cols=237 Identities=11% Similarity=-0.008 Sum_probs=183.3
Q ss_pred eEEEeccceeeeeecccce---eeEEeecC--------------------------------------------------
Q 046394 18 TWRIKQEAIAREVDILSSR---NQYDIMLP-------------------------------------------------- 44 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~~~---~~~~l~~~-------------------------------------------------- 44 (378)
.+....++.|++||+.+++ .+..+..+
T Consensus 18 ~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (450)
T 2vdu_B 18 LVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKRTAAKVPSPGLG 97 (450)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEEECCC-------------------------------------------------
T ss_pred EEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccccccCccccCCCCC
Confidence 5566678899999999998 55555433
Q ss_pred ----CCCceEEEEcCCCCEE-EEEeCCCcEEEEeC---CCCeEEeec--cCCC-eeEEEE-----EEEEEeCCCeEEEEE
Q 046394 45 ----ELGPYTLDFTSSGRYM-AAAGCKGYPYFYNR---DGTELHCSK--EHGE-VLKLQF-----LLASINKLGQLRYQN 108 (378)
Q Consensus 45 ----~~~v~~~~~sp~g~~l-~~~~~dg~i~iwd~---~~~~~~~~~--~~~~-~~~l~~-----~l~s~~~d~~i~iwd 108 (378)
...|.+++|+|+|++| ++|+.||.|+|||. .+..+..+. .|.. +.+++| +|++++.|+.|++|+
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID 177 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 3369999999999996 88999999999994 567777775 4444 489999 899999999999999
Q ss_pred cCCCcEEE----EEecCCCCeeEEEEcCC---CCEEEEEcCCCe---------------eeecCCCEEEEEEecCCCEEE
Q 046394 109 VTMGEIVG----NFWTGLGRTDVIRVNPF---NGVVSLGHSGGT---------------MLCHQGPVSALAFHPNGHLMA 166 (378)
Q Consensus 109 ~~~~~~~~----~~~~~~~~v~~~~~s~~---~~~l~~~~~d~~---------------~~~h~~~v~~~~~sp~g~~l~ 166 (378)
+.++.... .+..|...|.+++|+|+ +.+|++++.|+. +.+|...|.+++|+ ++++|+
T Consensus 178 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~ 256 (450)
T 2vdu_B 178 INSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLL 256 (450)
T ss_dssp TTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEE
T ss_pred cCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEE
Confidence 98876543 67788899999999999 999999999987 33799999999999 999999
Q ss_pred EEECCCeEEEEEcCCceeeeee--c--------------------------CCceEEEEecCCCc-----------cccC
Q 046394 167 TSGKDCKIKIWDLRKYEVLQTL--P--------------------------GHAKTLDFSRKDSG-----------DFSG 207 (378)
Q Consensus 167 t~~~d~~i~iwd~~~~~~~~~~--~--------------------------~~i~~~~~sp~g~~-----------~~~~ 207 (378)
+++.|++|+|||+.+++++..+ + ..+.+++|+|++.+ .+|+
T Consensus 257 s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 257 SAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp EEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred EEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 9999999999999999887766 1 24678999998875 4455
Q ss_pred C--CCC---ceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEEcCCCCcccccccC
Q 046394 208 S--HNY---NRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGEPNFDSWVA 263 (378)
Q Consensus 208 ~--~~~---~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~~s~d~~i~~w~~ 263 (378)
. ... ..+..+.. + ..|.+++|+|++.++++++.+. +++.+..+.+|..
T Consensus 337 ~~~~~~~~l~~~~~~~~-~-~~v~~~~~~~~~~~v~~~~~~~------~~~~~~~i~v~~~ 389 (450)
T 2vdu_B 337 MSEKQKGDLALKQIITF-P-YNVISLSAHNDEFQVTLDNKES------SGVQKNFAKFIEY 389 (450)
T ss_dssp ECSSSTTCEEEEEEEEC-S-SCEEEEEEETTEEEEEECCTTC------CSSCCCSEEEEEE
T ss_pred eccCCCCceeeccEecc-C-CceEEEEecCCcEEEEEecccC------CCCCCcceEEEEE
Confidence 4 333 44555555 4 6799999999654444444332 1233445555543
No 86
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3e-27 Score=221.84 Aligned_cols=213 Identities=11% Similarity=0.054 Sum_probs=165.3
Q ss_pred ceeeEEeecCCCCceEEEEcCCC---------CEEEEE-------------------eCCCcEEEEeCCC-Ce----EEe
Q 046394 35 SRNQYDIMLPELGPYTLDFTSSG---------RYMAAA-------------------GCKGYPYFYNRDG-TE----LHC 81 (378)
Q Consensus 35 ~~~~~~l~~~~~~v~~~~~sp~g---------~~l~~~-------------------~~dg~i~iwd~~~-~~----~~~ 81 (378)
+...+.+. +.+.|.+|+|+|++ ++||+| +.|++|+|||..+ .. ...
T Consensus 124 ~r~~~~~~-~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~ 202 (524)
T 2j04_B 124 KRRGFIYN-VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQT 202 (524)
T ss_dssp CSCEEEEE-CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEE
T ss_pred CcceEEEE-CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEE
Confidence 33444454 46889999999986 577664 4678999999543 22 234
Q ss_pred eccCCC-eeEEEE-----------EEEEEeCCCeEEEEEcCCCcE-----------EEEEecCCCCeeEEEEcCCCCEEE
Q 046394 82 SKEHGE-VLKLQF-----------LLASINKLGQLRYQNVTMGEI-----------VGNFWTGLGRTDVIRVNPFNGVVS 138 (378)
Q Consensus 82 ~~~~~~-~~~l~~-----------~l~s~~~d~~i~iwd~~~~~~-----------~~~~~~~~~~v~~~~~s~~~~~l~ 138 (378)
+.+|.+ +.+++| +||+++.||+|++||+.++.. ...+.+|...|.+++|+|++ .|+
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~la 281 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVV 281 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEE
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEE
Confidence 566655 488888 689999999999999986632 24677888999999999864 899
Q ss_pred EEcCCCe---------------eeecCCCEEEE--EEecCC-CEEEEEECCCeEEEEEcCCceeeeee--c---CCceEE
Q 046394 139 LGHSGGT---------------MLCHQGPVSAL--AFHPNG-HLMATSGKDCKIKIWDLRKYEVLQTL--P---GHAKTL 195 (378)
Q Consensus 139 ~~~~d~~---------------~~~h~~~v~~~--~~sp~g-~~l~t~~~d~~i~iwd~~~~~~~~~~--~---~~i~~~ 195 (378)
+|+.||. +.+|...|.+| +|+|+| ++|+|+|.|++|+|||+++++++.++ + ..+.++
T Consensus 282 sgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v 361 (524)
T 2j04_B 282 CGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPV 361 (524)
T ss_dssp EEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCE
T ss_pred EEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccce
Confidence 9999998 56799999999 578888 89999999999999999998876666 3 247899
Q ss_pred EEecCCCc----------cccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEE
Q 046394 196 DFSRKDSG----------DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 196 ~~sp~g~~----------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~ 250 (378)
+|+|++.. .+|+......+..+.+ |...|++|+|+|+|++|++|+.||.+.+|.
T Consensus 362 ~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g-H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 362 VYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS-RETTITAIGVSRLHPMVLAGSADGSLIITN 425 (524)
T ss_dssp EEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE-CSSCEEEEECCSSCCBCEEEETTTEEECCB
T ss_pred EeCCCcCeEEEeCCCCcEEEEECcccccceeeec-CCCceEEEEeCCCCCeEEEEECCCEEEEEe
Confidence 99998864 5677666666666777 889999999999999988888888766654
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=4.3e-26 Score=219.32 Aligned_cols=242 Identities=13% Similarity=0.041 Sum_probs=205.6
Q ss_pred eeeEEEeccceeeeeecccc--------eeeEEeecCCCCceEEEEcCCCCEEEEEeCC----CcEEEEeCCCCeEEeec
Q 046394 16 EKTWRIKQEAIAREVDILSS--------RNQYDIMLPELGPYTLDFTSSGRYMAAAGCK----GYPYFYNRDGTELHCSK 83 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~--------~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~d----g~i~iwd~~~~~~~~~~ 83 (378)
...+....++.|++||+.++ .....+..|...|.+++|+|++++|++++.+ +.|++|| .+..+..+.
T Consensus 79 ~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~~ 157 (615)
T 1pgu_A 79 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SGNSLGEVS 157 (615)
T ss_dssp CEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TCCEEEECC
T ss_pred CEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CCCcceeee
Confidence 44556677899999999855 6777888999999999999999999999987 7999999 667888899
Q ss_pred cCCCe-eEEEE------EEEEEeCCCeEEEEEcCCCcEEEEEecCCC---CeeEEEEcCC-CCEEEEEcCCCe-------
Q 046394 84 EHGEV-LKLQF------LLASINKLGQLRYQNVTMGEIVGNFWTGLG---RTDVIRVNPF-NGVVSLGHSGGT------- 145 (378)
Q Consensus 84 ~~~~~-~~l~~------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~v~~~~~s~~-~~~l~~~~~d~~------- 145 (378)
+|... .+++| ++++++.|+.|++||+.+++.+..+..|.. .|.+++|+|+ +.+|++++.++.
T Consensus 158 ~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 237 (615)
T 1pgu_A 158 GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK 237 (615)
T ss_dssp SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT
T ss_pred cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 99876 99999 799999999999999999999999999988 9999999999 999999999887
Q ss_pred -------e-e---ecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--c-----CCceEEEEe---------
Q 046394 146 -------M-L---CHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--P-----GHAKTLDFS--------- 198 (378)
Q Consensus 146 -------~-~---~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~-----~~i~~~~~s--------- 198 (378)
+ . .|...|.+++|+ ++.+|++++.|+.|++||+.+++++..+ + ..+.++.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 316 (615)
T 1pgu_A 238 SGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS 316 (615)
T ss_dssp TCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEE
T ss_pred CCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEE
Confidence 3 4 899999999999 9999999999999999999999988877 3 345666664
Q ss_pred cCCCccccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEE------------------------EcCCC
Q 046394 199 RKDSGDFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGIL------------------------IPGSG 254 (378)
Q Consensus 199 p~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~------------------------~~~s~ 254 (378)
.+|...+|+.....++..+.+ |...|+++.| |+ |++++.||.+.+| ++++.
T Consensus 317 ~~g~i~~~d~~~~~~~~~~~~-~~~~v~~~~~-~~---l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~ 391 (615)
T 1pgu_A 317 LDGTLNFYELGHDEVLKTISG-HNKGITALTV-NP---LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISW 391 (615)
T ss_dssp TTSCEEEEETTEEEEEEEECC-CSSCEEEEET-TT---TEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEET
T ss_pred CCCCEEEEECCCCcEEEEEeC-CCCCEEEEEe-cC---cEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeC
Confidence 244457788777777778877 8888999999 87 7888877766544 35567
Q ss_pred CcccccccCC
Q 046394 255 EPNFDSWVAN 264 (378)
Q Consensus 255 d~~i~~w~~~ 264 (378)
|+.+++|+..
T Consensus 392 d~~i~~~~~~ 401 (615)
T 1pgu_A 392 DDTLKVNGIT 401 (615)
T ss_dssp TTEEEETTEE
T ss_pred CCCEEEEEcc
Confidence 7888888764
No 88
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=4.2e-26 Score=219.38 Aligned_cols=243 Identities=14% Similarity=0.100 Sum_probs=205.8
Q ss_pred eeEEEeccceeeeeecccc----eeeEEeecCCCC-ceEEEEcC--CCCEEEEEeCCCcEEEEeC-C--------CCeEE
Q 046394 17 KTWRIKQEAIAREVDILSS----RNQYDIMLPELG-PYTLDFTS--SGRYMAAAGCKGYPYFYNR-D--------GTELH 80 (378)
Q Consensus 17 ~~~~~~~~~~i~~~d~~~~----~~~~~l~~~~~~-v~~~~~sp--~g~~l~~~~~dg~i~iwd~-~--------~~~~~ 80 (378)
+.+.+..++.+.+||+.++ +....+.+|... |.+++|+| ++++|++|+.||.|++||. + ...+.
T Consensus 31 ~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~ 110 (615)
T 1pgu_A 31 NAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKS 110 (615)
T ss_dssp TEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEE
T ss_pred CEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccc
Confidence 3444455889999999999 899999999999 99999999 9999999999999999996 3 35667
Q ss_pred eeccCCCe-eEEEE-----EEEEEeCC----CeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCC-EEEEEcCCCe----
Q 046394 81 CSKEHGEV-LKLQF-----LLASINKL----GQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNG-VVSLGHSGGT---- 145 (378)
Q Consensus 81 ~~~~~~~~-~~l~~-----~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~---- 145 (378)
.+..|... .+++| ++++++.+ +.|.+|| +++.+..+..|...|.+++|+|++. .+++++.|+.
T Consensus 111 ~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vw 188 (615)
T 1pgu_A 111 EFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFY 188 (615)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEE
T ss_pred hhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEE
Confidence 78878776 99999 88888877 6888887 6778889999999999999999998 8999999987
Q ss_pred ----------eeecCC---CEEEEEEecC-CCEEEEEECCCeEEEEEcCCceeeeee-------cCCceEEEEecCCCc-
Q 046394 146 ----------MLCHQG---PVSALAFHPN-GHLMATSGKDCKIKIWDLRKYEVLQTL-------PGHAKTLDFSRKDSG- 203 (378)
Q Consensus 146 ----------~~~h~~---~v~~~~~sp~-g~~l~t~~~d~~i~iwd~~~~~~~~~~-------~~~i~~~~~sp~g~~- 203 (378)
+.+|.. .|.+++|+|+ +++|++++.|+.|++||+.+++.+..+ ...+.+++|+ ++.+
T Consensus 189 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l 267 (615)
T 1pgu_A 189 QGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKF 267 (615)
T ss_dssp ETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEE
T ss_pred eCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEE
Confidence 556888 9999999999 999999999999999999999887766 2578999998 7764
Q ss_pred ---------cccCCCCCceEEEeeccC----CcceeeeEEcCCCCeEEEecCCCeEEEE---------------------
Q 046394 204 ---------DFSGSHNYNRYMGYSMVK----GYQIGKVSFRPYEDVLGIGHSMGVSGIL--------------------- 249 (378)
Q Consensus 204 ---------~~~~~~~~~~~~~~~~~~----~~~v~~~~~sp~g~~l~~~~~~g~~~~~--------------------- 249 (378)
.+|+......+..+.. + ...+.++.|+ ++.+|++++.+|.+.+|
T Consensus 268 ~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~ 345 (615)
T 1pgu_A 268 ATVGADATIRVWDVTTSKCVQKWTL-DKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITAL 345 (615)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEEC-CTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcC-CCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEE
Confidence 6777777777777665 3 3567888886 88999999999977654
Q ss_pred -----EcCCCCcccccccCC
Q 046394 250 -----IPGSGEPNFDSWVAN 264 (378)
Q Consensus 250 -----~~~s~d~~i~~w~~~ 264 (378)
++++.|+.+++|+..
T Consensus 346 ~~~~l~~~~~dg~i~~w~~~ 365 (615)
T 1pgu_A 346 TVNPLISGSYDGRIMEWSSS 365 (615)
T ss_dssp ETTTTEEEETTSCEEETTTT
T ss_pred EecCcEEECCCCeEEEEEch
Confidence 456778999999875
No 89
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.95 E-value=6.4e-26 Score=207.15 Aligned_cols=205 Identities=19% Similarity=0.212 Sum_probs=167.8
Q ss_pred eEEeecCCCCce--EEEEcCCCCEEEEEeCCCcEEEEeC-CCCeEEeecc-CCCe-eEEEE-----EEEEEeCCCeEEEE
Q 046394 38 QYDIMLPELGPY--TLDFTSSGRYMAAAGCKGYPYFYNR-DGTELHCSKE-HGEV-LKLQF-----LLASINKLGQLRYQ 107 (378)
Q Consensus 38 ~~~l~~~~~~v~--~~~~sp~g~~l~~~~~dg~i~iwd~-~~~~~~~~~~-~~~~-~~l~~-----~l~s~~~d~~i~iw 107 (378)
++...+|...++ +++|++ ..+++++.||.|++||. ++.....+.. |... .+++| +|++++.||.|++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iw 161 (401)
T 4aez_A 84 VLDAPGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIY 161 (401)
T ss_dssp EEECTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeeCCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEE
Confidence 444456655544 566665 45788889999999994 5666666555 5554 99999 99999999999999
Q ss_pred EcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe---------------eeecCCCEEEEEEecCCCEEEEEECCC
Q 046394 108 NVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT---------------MLCHQGPVSALAFHPNGHLMATSGKDC 172 (378)
Q Consensus 108 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~---------------~~~h~~~v~~~~~sp~g~~l~t~~~d~ 172 (378)
|+.+++.+..+..|...|.+++| ++.+|++++.++. +.+|.+.|.+++|+|++++|++++.|+
T Consensus 162 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 162 DVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence 99999999999999999999999 5679999999987 667999999999999999999999999
Q ss_pred eEEEEEcCCceeeeee---cCCceEEEEecCCCc-------------cccCCCCCceEEEeeccCCcceeeeEEcCCCCe
Q 046394 173 KIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSG-------------DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDV 236 (378)
Q Consensus 173 ~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g~~-------------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~ 236 (378)
.|++||++++.++..+ ...+.+++|+|++.. .+|+.....++..+. +...|.+++|+|++.+
T Consensus 240 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~ 317 (401)
T 4aez_A 240 VVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD--AGSQVTSLIWSPHSKE 317 (401)
T ss_dssp CEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSE
T ss_pred eEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe--CCCcEEEEEECCCCCe
Confidence 9999999999988877 478999999997654 455556666666664 4567999999999999
Q ss_pred EEE--ecCCCeEEE
Q 046394 237 LGI--GHSMGVSGI 248 (378)
Q Consensus 237 l~~--~~~~g~~~~ 248 (378)
|++ |+.+|.+.+
T Consensus 318 l~~~~g~~dg~i~v 331 (401)
T 4aez_A 318 IMSTHGFPDNNLSI 331 (401)
T ss_dssp EEEEECTTTCEEEE
T ss_pred EEEEeecCCCcEEE
Confidence 988 557876553
No 90
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.9e-27 Score=231.80 Aligned_cols=213 Identities=13% Similarity=0.111 Sum_probs=175.6
Q ss_pred EEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeC---CCCeEEeeccCCCe-eEEEE-------EEEEEeCCCeEEEE
Q 046394 39 YDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNR---DGTELHCSKEHGEV-LKLQF-------LLASINKLGQLRYQ 107 (378)
Q Consensus 39 ~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~---~~~~~~~~~~~~~~-~~l~~-------~l~s~~~d~~i~iw 107 (378)
..+.+|.+.|++++|+|+|++|++|+.||.|+|||. ++..+..+.+|.+. .+++| ++++|+.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 457899999999999999999999999999999995 34566788899876 99999 89999999999999
Q ss_pred EcCCCc--EEEEEecCCCCeeEEEEcCC--CCEEEEEcCCCe----------------eeecCCCEEEEEEec-------
Q 046394 108 NVTMGE--IVGNFWTGLGRTDVIRVNPF--NGVVSLGHSGGT----------------MLCHQGPVSALAFHP------- 160 (378)
Q Consensus 108 d~~~~~--~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~----------------~~~h~~~v~~~~~sp------- 160 (378)
|+.+++ .+..+..|...|.+++|+|+ +..+++|+.||. +.+|...|.+++|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 999987 67788889999999999999 999999999987 557889999999999
Q ss_pred ------CCCEEEEEECCCeEEEEEcCCc----eeeeee---cCCceEEEEecC---CCc----------cccCCCCCc--
Q 046394 161 ------NGHLMATSGKDCKIKIWDLRKY----EVLQTL---PGHAKTLDFSRK---DSG----------DFSGSHNYN-- 212 (378)
Q Consensus 161 ------~g~~l~t~~~d~~i~iwd~~~~----~~~~~~---~~~i~~~~~sp~---g~~----------~~~~~~~~~-- 212 (378)
++.+|++|+.||.|++||++++ .+...+ ...|++++|+|+ |.+ .+|+.....
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~ 242 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP 242 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSC
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCc
Confidence 5899999999999999999886 444555 378999999999 554 455544332
Q ss_pred ---eEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEEcC
Q 046394 213 ---RYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPG 252 (378)
Q Consensus 213 ---~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~~ 252 (378)
....... |...|++++|+|+|.+|++|+.||.+.+|-..
T Consensus 243 ~~~~~~~~~~-~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 243 WKKTLLKEEK-FPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp CBCCBSSSSC-CSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred ceeEEeccCC-CCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 2222223 67789999999999999999999988777543
No 91
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=1.8e-26 Score=207.46 Aligned_cols=213 Identities=11% Similarity=0.129 Sum_probs=171.7
Q ss_pred eecCCCCceEEEEcCC----CCEEEEEeCCCcEEEEeC-CCCeEEeecc-----CCC-eeEEEE---------EEEEEeC
Q 046394 41 IMLPELGPYTLDFTSS----GRYMAAAGCKGYPYFYNR-DGTELHCSKE-----HGE-VLKLQF---------LLASINK 100 (378)
Q Consensus 41 l~~~~~~v~~~~~sp~----g~~l~~~~~dg~i~iwd~-~~~~~~~~~~-----~~~-~~~l~~---------~l~s~~~ 100 (378)
..+|...|++++|+|+ ...+++++.++.|++||. ++..+..+.. |.. +.+++| +|++++.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 4489999999999984 456777777789999994 4666655543 333 488888 5999999
Q ss_pred CCeEEEEEcCCCcEEEEEecCCCCeeEEEEcC-CCCEEEEEcCCCe--------------e---eecCCCEEEEEEecCC
Q 046394 101 LGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNP-FNGVVSLGHSGGT--------------M---LCHQGPVSALAFHPNG 162 (378)
Q Consensus 101 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~--------------~---~~h~~~v~~~~~sp~g 162 (378)
||.|++||+.+++.+..+..|...|.+++|+| ++.+|++++.|+. + .+|...|.+++|+|++
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 173 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG 173 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCC
Confidence 99999999999999999999999999999999 8999999999987 3 5799999999999999
Q ss_pred CEEEEEECCCeEEEEEcCCceeeeee-------------------------------cCCceEEEEec--------CCCc
Q 046394 163 HLMATSGKDCKIKIWDLRKYEVLQTL-------------------------------PGHAKTLDFSR--------KDSG 203 (378)
Q Consensus 163 ~~l~t~~~d~~i~iwd~~~~~~~~~~-------------------------------~~~i~~~~~sp--------~g~~ 203 (378)
++|++++.|+.|++||+++++.+..+ ...+.+++|++ +|..
T Consensus 174 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i 253 (366)
T 3k26_A 174 EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAI 253 (366)
T ss_dssp SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEE
T ss_pred CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEE
Confidence 99999999999999999987554221 35678888873 3334
Q ss_pred cccCCCCCc--------------eEEEeeccCCcceeeeEEcCC--CCeEEEecCCCeEEEEEcCCC
Q 046394 204 DFSGSHNYN--------------RYMGYSMVKGYQIGKVSFRPY--EDVLGIGHSMGVSGILIPGSG 254 (378)
Q Consensus 204 ~~~~~~~~~--------------~~~~~~~~~~~~v~~~~~sp~--g~~l~~~~~~g~~~~~~~~s~ 254 (378)
.+|+..... .+..+.. |...|++++|+|+ |.+|++|+.+|.+.+|....+
T Consensus 254 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 254 VCWKPGKMEDDIDKIKPSESNVTILGRFDY-SQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp EEEEESSTTCCGGGCCTTCCCEEEEEEEEC-SSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSS
T ss_pred EEEeCCCccccccccccCCcchheeccccc-cCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCC
Confidence 566654432 3556666 7888999999999 999999999888777765443
No 92
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=4.4e-26 Score=201.38 Aligned_cols=197 Identities=12% Similarity=0.084 Sum_probs=160.9
Q ss_pred ceeeEEEeccceeeeeecccce--eeEEeecCCCCceEEEEcC--CCCEEEEEeCCCcEEEEeCCC---CeEEeeccCCC
Q 046394 15 VEKTWRIKQEAIAREVDILSSR--NQYDIMLPELGPYTLDFTS--SGRYMAAAGCKGYPYFYNRDG---TELHCSKEHGE 87 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~--~~~~l~~~~~~v~~~~~sp--~g~~l~~~~~dg~i~iwd~~~---~~~~~~~~~~~ 87 (378)
....+..+.|+.|++||+.++. .+..+.+|...|.+++|+| ++++|++|+.|++|++||... ..+..+.+|..
T Consensus 25 g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~ 104 (316)
T 3bg1_A 25 GTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDS 104 (316)
T ss_dssp GCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSS
T ss_pred CCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCC
Confidence 3456677889999999998774 4678899999999999986 489999999999999999543 35667888887
Q ss_pred e-eEEEE-------EEEEEeCCCeEEEEEcCCCcE---EEEEecCCCCeeEEEEcCC-----------------CCEEEE
Q 046394 88 V-LKLQF-------LLASINKLGQLRYQNVTMGEI---VGNFWTGLGRTDVIRVNPF-----------------NGVVSL 139 (378)
Q Consensus 88 ~-~~l~~-------~l~s~~~d~~i~iwd~~~~~~---~~~~~~~~~~v~~~~~s~~-----------------~~~l~~ 139 (378)
. .+++| +|++++.|++|++||+..+.. ...+..|...+.+++|+|+ +.+|++
T Consensus 105 ~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 184 (316)
T 3bg1_A 105 SVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFAS 184 (316)
T ss_dssp CCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEEC
T ss_pred ceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEE
Confidence 6 99999 799999999999999987632 2345567888999999998 468999
Q ss_pred EcCCCe-----------------eeecCCCEEEEEEecCC----CEEEEEECCCeEEEEEcCCc---e----eeeeecCC
Q 046394 140 GHSGGT-----------------MLCHQGPVSALAFHPNG----HLMATSGKDCKIKIWDLRKY---E----VLQTLPGH 191 (378)
Q Consensus 140 ~~~d~~-----------------~~~h~~~v~~~~~sp~g----~~l~t~~~d~~i~iwd~~~~---~----~~~~~~~~ 191 (378)
|+.|+. +.+|...|.+++|+|++ .+|++++.|++|+|||+.+. . .+..+...
T Consensus 185 gs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~ 264 (316)
T 3bg1_A 185 GGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDV 264 (316)
T ss_dssp CBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSC
T ss_pred ecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCc
Confidence 998876 45689999999999986 89999999999999999762 1 12222578
Q ss_pred ceEEEEecCCCccccCCCCC
Q 046394 192 AKTLDFSRKDSGDFSGSHNY 211 (378)
Q Consensus 192 i~~~~~sp~g~~~~~~~~~~ 211 (378)
+.+++|+|+|.+.+....++
T Consensus 265 v~~v~~sp~g~~las~~~D~ 284 (316)
T 3bg1_A 265 VWHVSWSITANILAVSGGDN 284 (316)
T ss_dssp EEEEEECTTTCCEEEEESSS
T ss_pred EEEEEEcCCCCEEEEEcCCC
Confidence 99999999998766554443
No 93
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=3.2e-27 Score=215.11 Aligned_cols=226 Identities=10% Similarity=-0.026 Sum_probs=156.8
Q ss_pred eeEEEeccceeeeeecccceee-----EEeecCCCCceEEEEcC--------CCCEEEEEeCCCcEEEEeC-CCCeEEee
Q 046394 17 KTWRIKQEAIAREVDILSSRNQ-----YDIMLPELGPYTLDFTS--------SGRYMAAAGCKGYPYFYNR-DGTELHCS 82 (378)
Q Consensus 17 ~~~~~~~~~~i~~~d~~~~~~~-----~~l~~~~~~v~~~~~sp--------~g~~l~~~~~dg~i~iwd~-~~~~~~~~ 82 (378)
.......|++|++||+.++... ..+.+|.+.|++++|+| ||++||+|+.|++|+|||+ ++.++..+
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~ 182 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAG 182 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeee
Confidence 3556677999999999888653 23678999999999998 8899999999999999994 56666666
Q ss_pred ccCCCe-eEEEE------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCC----eeEEEEcCCCCEEEEEcCCCeeeecCC
Q 046394 83 KEHGEV-LKLQF------LLASINKLGQLRYQNVTMGEIVGNFWTGLGR----TDVIRVNPFNGVVSLGHSGGTMLCHQG 151 (378)
Q Consensus 83 ~~~~~~-~~l~~------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~~~~~d~~~~~h~~ 151 (378)
..|... .+++| +|++++.|++|++||+.+++.......+... +....+.+...... ..+|..
T Consensus 183 ~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~-------~~~~~~ 255 (393)
T 4gq1_A 183 YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCH-------SSGIAS 255 (393)
T ss_dssp EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-------------CCSS
T ss_pred cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeee-------cccccc
Confidence 666654 99999 7999999999999999998876655433222 22222222221111 247888
Q ss_pred CEEEEEEe-cCCCEEEEEECCCeEEEEEcCCceeeeee---cCCc------------------eEEEE------------
Q 046394 152 PVSALAFH-PNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHA------------------KTLDF------------ 197 (378)
Q Consensus 152 ~v~~~~~s-p~g~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i------------------~~~~~------------ 197 (378)
.|.++.|+ |+|..|++++.|+++++||+.++.....+ ...+ ....|
T Consensus 256 ~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg 335 (393)
T 4gq1_A 256 SLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAH 335 (393)
T ss_dssp SCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEE
T ss_pred cceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEE
Confidence 99999997 69999999999999999999876654443 0111 11122
Q ss_pred ecCCCccccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEE
Q 046394 198 SRKDSGDFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILI 250 (378)
Q Consensus 198 sp~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~ 250 (378)
+.||...+|+...+........ |..+|.+|+|+|||++||+++++|+..+-+
T Consensus 336 s~Dg~V~lwd~~~~~~~~~~~~-~~~~V~svafspdG~~LA~as~~Gv~lvrL 387 (393)
T 4gq1_A 336 SQHGLIQLINTYEKDSNSIPIQ-LGMPIVDFCWHQDGSHLAIATEGSVLLTRL 387 (393)
T ss_dssp TTTTEEEEEETTCTTCCEEEEE-CSSCEEEEEECTTSSEEEEEESSEEEEEEE
T ss_pred CCCCEEEEEECCCCcEEEEecC-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 3355568888887777777666 788999999999999999999998655444
No 94
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=2.4e-26 Score=205.97 Aligned_cols=213 Identities=15% Similarity=0.106 Sum_probs=166.2
Q ss_pred EEeecCCCCceEEEEcCCCCEE-EEEeC---CCcEEEEeCC-CCeEEe-eccCCCe-eEEEE--------EEEEEeCCCe
Q 046394 39 YDIMLPELGPYTLDFTSSGRYM-AAAGC---KGYPYFYNRD-GTELHC-SKEHGEV-LKLQF--------LLASINKLGQ 103 (378)
Q Consensus 39 ~~l~~~~~~v~~~~~sp~g~~l-~~~~~---dg~i~iwd~~-~~~~~~-~~~~~~~-~~l~~--------~l~s~~~d~~ 103 (378)
..+.+|...|.+++|+|++..+ ++|+. ||.|++||.. +..... ..+|... .+++| ++++++.|+.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 3457799999999999999655 55655 8999999954 443322 2356554 89988 5999999999
Q ss_pred EEEEEcCCCc-EEEEEecCCCCeeEEE------EcCCCCEEEEEcCCCe---------------eeecCC----CEEEEE
Q 046394 104 LRYQNVTMGE-IVGNFWTGLGRTDVIR------VNPFNGVVSLGHSGGT---------------MLCHQG----PVSALA 157 (378)
Q Consensus 104 i~iwd~~~~~-~~~~~~~~~~~v~~~~------~s~~~~~l~~~~~d~~---------------~~~h~~----~v~~~~ 157 (378)
|++||+.+++ .+..+..|...|.++. |+|++.+|++++.|+. +..|.+ .|.+++
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 9999999988 8888999999999995 5789999999999987 223333 788888
Q ss_pred ----EecCCCEEEEEECCCeEEEEEcCCceeeeee--cCCceEEEEec---CCCc----------cccCCCCCceEEEe-
Q 046394 158 ----FHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLDFSR---KDSG----------DFSGSHNYNRYMGY- 217 (378)
Q Consensus 158 ----~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp---~g~~----------~~~~~~~~~~~~~~- 217 (378)
|+|++++|++++.|+.|++||+++++..... ...+.+++|+| ++.+ .+|+.....+...+
T Consensus 172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 251 (357)
T 3i2n_A 172 FGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFA 251 (357)
T ss_dssp EECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEE
T ss_pred EEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccccee
Confidence 7889999999999999999999999886666 57899999999 7765 44544333332222
Q ss_pred ----eccCCcceeeeEEcCCCC-eEEEecCCCeEEEEEcC
Q 046394 218 ----SMVKGYQIGKVSFRPYED-VLGIGHSMGVSGILIPG 252 (378)
Q Consensus 218 ----~~~~~~~v~~~~~sp~g~-~l~~~~~~g~~~~~~~~ 252 (378)
.+ |...|++++|+|++. +|++++.||.+.+|...
T Consensus 252 ~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 252 SVSEKA-HKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp EEEEEC-CSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred eeccCC-CcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 25 888999999999998 78888888887777543
No 95
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7.1e-26 Score=202.44 Aligned_cols=235 Identities=11% Similarity=0.028 Sum_probs=179.0
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC----------CeEEeec-c
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG----------TELHCSK-E 84 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~----------~~~~~~~-~ 84 (378)
...+....|+.|++||+.+++.+..+. ...|.++.|+|+ +++|+.|+.|++|+..+ ..+..+. .
T Consensus 49 ~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 123 (343)
T 3lrv_A 49 WVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD 123 (343)
T ss_dssp EEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred CEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecC
Confidence 446677889999999999999888877 367888999998 99999999999997543 2233333 4
Q ss_pred CCC-eeEEEE-------EEEEEeCCCeEEEEEcCCCcEEEEEec-CCCCeeEEEEcCCCCEEEEEcCCCe----------
Q 046394 85 HGE-VLKLQF-------LLASINKLGQLRYQNVTMGEIVGNFWT-GLGRTDVIRVNPFNGVVSLGHSGGT---------- 145 (378)
Q Consensus 85 ~~~-~~~l~~-------~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~---------- 145 (378)
|.+ +.+++| ++++++.|++|++||+.+++.+..+.. +...+.+++|+|++.+|++|+.|+.
T Consensus 124 ~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD 203 (343)
T ss_dssp CSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT
T ss_pred CCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC
Confidence 444 488887 799999999999999999998776643 4557999999999999999999987
Q ss_pred -----eee-cCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee-c-----CCc--eEEEEecCCCccccCCCCC
Q 046394 146 -----MLC-HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL-P-----GHA--KTLDFSRKDSGDFSGSHNY 211 (378)
Q Consensus 146 -----~~~-h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~-~-----~~i--~~~~~sp~g~~~~~~~~~~ 211 (378)
+.. |.++|++++|+|+|.+|++++ |+.|++||++++..+..+ . ..+ .+++|+|+|.+.+......
T Consensus 204 ~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d 282 (343)
T 3lrv_A 204 QASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNES 282 (343)
T ss_dssp SCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTT
T ss_pred CCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCC
Confidence 445 899999999999999999999 559999999998776554 1 233 3699999999877633312
Q ss_pred ceEEEeeccCC------cceeeeEEcC---CCCeEEEecCCCeEEEEEcCCCCc
Q 046394 212 NRYMGYSMVKG------YQIGKVSFRP---YEDVLGIGHSMGVSGILIPGSGEP 256 (378)
Q Consensus 212 ~~~~~~~~~~~------~~v~~~~~sp---~g~~l~~~~~~g~~~~~~~~s~d~ 256 (378)
..+..+..... .++..+.|+| ++..|++++.+|.+.+++..+.+.
T Consensus 283 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~ 336 (343)
T 3lrv_A 283 NSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVVCGDGGIAAILKTNDSF 336 (343)
T ss_dssp TEEEEEEECTTTCSEEEEEEEECCC----CCCCEEEEEEETTEEEEEEECSSEE
T ss_pred CcEEEEEEcccccceEecCceeEecCccccccceeEEEecCCceEEEEecCCeE
Confidence 22333321011 3456789999 889999999999888777554443
No 96
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=2.2e-25 Score=195.13 Aligned_cols=196 Identities=12% Similarity=0.104 Sum_probs=161.1
Q ss_pred ceeeEEEeccceeeeeeccc--ceeeEEeecCCCCceEEEEcCC--CCEEEEEeCCCcEEEEeCCC---CeEEeeccCCC
Q 046394 15 VEKTWRIKQEAIAREVDILS--SRNQYDIMLPELGPYTLDFTSS--GRYMAAAGCKGYPYFYNRDG---TELHCSKEHGE 87 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~--~~~~~~l~~~~~~v~~~~~sp~--g~~l~~~~~dg~i~iwd~~~---~~~~~~~~~~~ 87 (378)
....+..+.|+.|++||+.+ .+.+..+.+|...|.+++|+|+ +++|++|+.||+|+|||... ..+..+.+|..
T Consensus 21 g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~ 100 (297)
T 2pm7_B 21 GKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSA 100 (297)
T ss_dssp SSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSS
T ss_pred CCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCC
Confidence 45667778899999999974 4677889999999999999864 89999999999999999543 24566777876
Q ss_pred e-eEEEE-------EEEEEeCCCeEEEEEcCCCc--EEEEEecCCCCeeEEEEcCC-------------CCEEEEEcCCC
Q 046394 88 V-LKLQF-------LLASINKLGQLRYQNVTMGE--IVGNFWTGLGRTDVIRVNPF-------------NGVVSLGHSGG 144 (378)
Q Consensus 88 ~-~~l~~-------~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~s~~-------------~~~l~~~~~d~ 144 (378)
. .+++| +|++++.|++|++||+.++. ....+..|...|.+++|+|+ +.+|++|+.|+
T Consensus 101 ~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~ 180 (297)
T 2pm7_B 101 SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 180 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTS
T ss_pred ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCC
Confidence 5 99999 79999999999999998763 24567789999999999997 57999999998
Q ss_pred e------------------eeecCCCEEEEEEecCC---CEEEEEECCCeEEEEEcCCce--e-eeee-----cCCceEE
Q 046394 145 T------------------MLCHQGPVSALAFHPNG---HLMATSGKDCKIKIWDLRKYE--V-LQTL-----PGHAKTL 195 (378)
Q Consensus 145 ~------------------~~~h~~~v~~~~~sp~g---~~l~t~~~d~~i~iwd~~~~~--~-~~~~-----~~~i~~~ 195 (378)
. +.+|...|.+++|+|++ .+|++++.|++|+|||+.+.. . ...+ ...+.++
T Consensus 181 ~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~ 260 (297)
T 2pm7_B 181 LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRA 260 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEE
T ss_pred cEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEE
Confidence 6 45799999999999984 899999999999999998742 1 1111 4678999
Q ss_pred EEecCCCccccCCCC
Q 046394 196 DFSRKDSGDFSGSHN 210 (378)
Q Consensus 196 ~~sp~g~~~~~~~~~ 210 (378)
+|+|+|.+.+....+
T Consensus 261 ~~s~~g~~las~~~D 275 (297)
T 2pm7_B 261 SWSLSGNVLALSGGD 275 (297)
T ss_dssp EECSSSCCEEEEETT
T ss_pred EECCCCCEEEEEcCC
Confidence 999999876554433
No 97
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=5.6e-25 Score=203.09 Aligned_cols=199 Identities=14% Similarity=0.183 Sum_probs=174.2
Q ss_pred ecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-eEEEE---EEEEEeCCCeEEEEEcCCCcEEE
Q 046394 42 MLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV-LKLQF---LLASINKLGQLRYQNVTMGEIVG 116 (378)
Q Consensus 42 ~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~-~~l~~---~l~s~~~d~~i~iwd~~~~~~~~ 116 (378)
..|...|+++.| ++++|++|+.||.|++|| .++..+..+.+|.+. .+++| ++++|+.||+|++||+.+++.+.
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 207 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLN 207 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 345567888876 789999999999999999 567888889999876 99999 99999999999999999999999
Q ss_pred EEecCCCCeeEEEEcCCCCEEEEEcCCCe-----------------eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEc
Q 046394 117 NFWTGLGRTDVIRVNPFNGVVSLGHSGGT-----------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDL 179 (378)
Q Consensus 117 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-----------------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~ 179 (378)
.+..|...|.+++|++ ..+++++.|+. +.+|...|.+++| ++++|++++.||.|++||+
T Consensus 208 ~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~ 283 (435)
T 1p22_A 208 TLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNT 283 (435)
T ss_dssp EECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET
T ss_pred EEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEEC
Confidence 9999999999999974 59999999887 4578899999999 6789999999999999999
Q ss_pred CCceeeeee---cCCceEEEEec--------CCCccccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEE
Q 046394 180 RKYEVLQTL---PGHAKTLDFSR--------KDSGDFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGI 248 (378)
Q Consensus 180 ~~~~~~~~~---~~~i~~~~~sp--------~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~ 248 (378)
++++++..+ ...+.++.|++ ||...+|+..+..++..+.+ |...|.++.| ++.+|++|+.||.+.+
T Consensus 284 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~--~~~~l~sg~~dg~i~v 360 (435)
T 1p22_A 284 STCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRF--DNKRIVSGAYDGKIKV 360 (435)
T ss_dssp TTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEC--CSSEEEEEETTSCEEE
T ss_pred CcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeC-CcCcEEEEEe--cCCEEEEEeCCCcEEE
Confidence 999998888 36788887754 56678999988888888888 8899999999 7889999999987765
Q ss_pred E
Q 046394 249 L 249 (378)
Q Consensus 249 ~ 249 (378)
|
T Consensus 361 w 361 (435)
T 1p22_A 361 W 361 (435)
T ss_dssp E
T ss_pred E
Confidence 4
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.5e-26 Score=209.31 Aligned_cols=203 Identities=13% Similarity=0.085 Sum_probs=158.0
Q ss_pred eeecccceeeEEe-ecCCCCceEEEEcC-CCCEEEEEeCCCcEEEEeCC----CC---eEEeeccCCCe-eEEEE-----
Q 046394 29 EVDILSSRNQYDI-MLPELGPYTLDFTS-SGRYMAAAGCKGYPYFYNRD----GT---ELHCSKEHGEV-LKLQF----- 93 (378)
Q Consensus 29 ~~d~~~~~~~~~l-~~~~~~v~~~~~sp-~g~~l~~~~~dg~i~iwd~~----~~---~~~~~~~~~~~-~~l~~----- 93 (378)
.|+ .+++.+..+ .+|...|++++|+| ++.+|++|+.||.|+|||.. +. ....+ .|... .+++|
T Consensus 47 ~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~ 124 (437)
T 3gre_A 47 MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFD 124 (437)
T ss_dssp GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSS
T ss_pred ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCC
Confidence 477 467778888 88999999999999 99999999999999999942 22 12333 46654 99999
Q ss_pred EEEEEeCCCeEEEEEcC---CCcEEEEEec------------CCCCeeEEE--EcCCCCEEEEEcCCCe-----------
Q 046394 94 LLASINKLGQLRYQNVT---MGEIVGNFWT------------GLGRTDVIR--VNPFNGVVSLGHSGGT----------- 145 (378)
Q Consensus 94 ~l~s~~~d~~i~iwd~~---~~~~~~~~~~------------~~~~v~~~~--~s~~~~~l~~~~~d~~----------- 145 (378)
+|++++.|++|++||+. +++.+..+.. +...+.++. +++++.+|++++.|+.
T Consensus 125 ~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 204 (437)
T 3gre_A 125 AFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER 204 (437)
T ss_dssp EEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee
Confidence 89999999999999995 5554443321 345566666 6688999999999998
Q ss_pred ---eee--cCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee----cCCceEEEEecC----CC----------
Q 046394 146 ---MLC--HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL----PGHAKTLDFSRK----DS---------- 202 (378)
Q Consensus 146 ---~~~--h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~----~~~i~~~~~sp~----g~---------- 202 (378)
+.+ |.+.|++++|+|++++|++++.||+|++||+++++++.++ +..|.+++|+|. +.
T Consensus 205 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~ 284 (437)
T 3gre_A 205 LQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTF 284 (437)
T ss_dssp EEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEE
T ss_pred eEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCc
Confidence 445 8899999999999999999999999999999999998876 357889977653 32
Q ss_pred ccccCCCCCceEEEeeccCCcceeeeEEcCCC
Q 046394 203 GDFSGSHNYNRYMGYSMVKGYQIGKVSFRPYE 234 (378)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g 234 (378)
..+|+......+..+.+ |...+..+.|+|++
T Consensus 285 i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~ 315 (437)
T 3gre_A 285 LTIWNFVKGHCQYAFIN-SDEQPSMEHFLPIE 315 (437)
T ss_dssp EEEEETTTTEEEEEEES-SSSCCCGGGGSCBC
T ss_pred EEEEEcCCCcEEEEEEc-CCCCCccceecccc
Confidence 47788877777777765 44444444454443
No 99
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.3e-25 Score=220.55 Aligned_cols=232 Identities=10% Similarity=0.078 Sum_probs=166.8
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecC------------------CCCceEEEEcCCCCEEEEEeCCCcEEEEeC-CC
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLP------------------ELGPYTLDFTSSGRYMAAAGCKGYPYFYNR-DG 76 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~------------------~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~-~~ 76 (378)
...+....++.+ +||+.+++....+..| ...|.+++|+|+|.+|++|+.||.|++||. ++
T Consensus 165 ~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 165 GTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp EEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTC
T ss_pred CEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 455666778999 9999999988888766 467999999999999999999999999995 55
Q ss_pred CeEEe--ec---cC-------------CC-eeEEEE----------EEEEEeC---------------------------
Q 046394 77 TELHC--SK---EH-------------GE-VLKLQF----------LLASINK--------------------------- 100 (378)
Q Consensus 77 ~~~~~--~~---~~-------------~~-~~~l~~----------~l~s~~~--------------------------- 100 (378)
.++.. +. .| .. +.+++| ++++|+.
T Consensus 244 ~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~ 323 (902)
T 2oaj_A 244 HMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEG 323 (902)
T ss_dssp CEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHH
T ss_pred cEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhh
Confidence 55442 21 12 22 255555 3444433
Q ss_pred -------------------------------------------------CCeEEEEEcCCCcEEEE--------------
Q 046394 101 -------------------------------------------------LGQLRYQNVTMGEIVGN-------------- 117 (378)
Q Consensus 101 -------------------------------------------------d~~i~iwd~~~~~~~~~-------------- 117 (378)
|+.|++||+.++.....
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~ 403 (902)
T 2oaj_A 324 MKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPL 403 (902)
T ss_dssp HHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTB
T ss_pred hhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCC
Confidence 34445555444322111
Q ss_pred ---------------------------EecCCCCeeEEEEcCCCCEEEEEcCCCe----------e--------------
Q 046394 118 ---------------------------FWTGLGRTDVIRVNPFNGVVSLGHSGGT----------M-------------- 146 (378)
Q Consensus 118 ---------------------------~~~~~~~v~~~~~s~~~~~l~~~~~d~~----------~-------------- 146 (378)
+.+|...+..++|+|++++|++|+.|+. +
T Consensus 404 v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~ 483 (902)
T 2oaj_A 404 ATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTL 483 (902)
T ss_dssp EEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHT
T ss_pred eeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhc
Confidence 1112223344566899999999999998 1
Q ss_pred -eecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCce------------------------------------------
Q 046394 147 -LCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYE------------------------------------------ 183 (378)
Q Consensus 147 -~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~------------------------------------------ 183 (378)
.+|...|.+++|+|+|++||+|+.||+|+|||+.+++
T Consensus 484 ~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (902)
T 2oaj_A 484 NKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQ 563 (902)
T ss_dssp TCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSE
T ss_pred CCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCC
Confidence 0688899999999999999999999999999997652
Q ss_pred ---eeeee---cCCceEEEEecCCCc----------cccCCCCCceEE-----Eee-ccCCcceeeeEEc-----CCC--
Q 046394 184 ---VLQTL---PGHAKTLDFSRKDSG----------DFSGSHNYNRYM-----GYS-MVKGYQIGKVSFR-----PYE-- 234 (378)
Q Consensus 184 ---~~~~~---~~~i~~~~~sp~g~~----------~~~~~~~~~~~~-----~~~-~~~~~~v~~~~~s-----p~g-- 234 (378)
++..+ .+.|++++||||| + .+|+......+. .+. + |...|++|+|+ |||
T Consensus 564 g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~g-h~~~V~sv~Fs~~~~~~Dg~~ 641 (902)
T 2oaj_A 564 GFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGA-QSACVTCIEFVIMEYGDDGYS 641 (902)
T ss_dssp EEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSS-CCCCEEEEEEEEEECTTSSSE
T ss_pred ccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccc-cccceEEEEEEEEecCCCCCc
Confidence 34555 4789999999999 5 567765555443 222 5 78889999999 885
Q ss_pred -CeEEEecCCCeEEEEE
Q 046394 235 -DVLGIGHSMGVSGILI 250 (378)
Q Consensus 235 -~~l~~~~~~g~~~~~~ 250 (378)
.+|++|+.||.+.+|.
T Consensus 642 ~~~l~sgs~D~tv~~wd 658 (902)
T 2oaj_A 642 SILMVCGTDMGEVITYK 658 (902)
T ss_dssp EEEEEEEETTSEEEEEE
T ss_pred ceEEEEEecCCcEEEEE
Confidence 6777777777666664
No 100
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=1.1e-23 Score=191.26 Aligned_cols=230 Identities=9% Similarity=0.070 Sum_probs=181.7
Q ss_pred EEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEE-EEEeCCCcEEEEeC-CCCeEEeeccCCCeeEEEE----
Q 046394 20 RIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYM-AAAGCKGYPYFYNR-DGTELHCSKEHGEVLKLQF---- 93 (378)
Q Consensus 20 ~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l-~~~~~dg~i~iwd~-~~~~~~~~~~~~~~~~l~~---- 93 (378)
....++.|++||+.+++....+..| ..+.+++|+|+|++| ++++.|+.|++||. ++..+..+..+..+.+++|
T Consensus 7 s~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg 85 (391)
T 1l0q_A 7 ANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDG 85 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTS
T ss_pred EcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCC
Confidence 3456789999999999999888887 568999999999977 56668999999995 6777777877777799999
Q ss_pred --EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEE-EEEcCCCe-------------eeecCCCEEEEE
Q 046394 94 --LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVV-SLGHSGGT-------------MLCHQGPVSALA 157 (378)
Q Consensus 94 --~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~-------------~~~h~~~v~~~~ 157 (378)
++++++.++.|++||+.+++.+..+..+ ..+.+++|+|+++.+ ++++.++. ...+...+.+++
T Consensus 86 ~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 164 (391)
T 1l0q_A 86 KQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIA 164 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEE
T ss_pred CEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEE
Confidence 4456667899999999999988887654 578999999999977 67776776 222345679999
Q ss_pred EecCCCEE-EEEECCCeEEEEEcCCceeeeee--cCCceEEEEecCCCc-------------cccCCCCCceEEEeeccC
Q 046394 158 FHPNGHLM-ATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSG-------------DFSGSHNYNRYMGYSMVK 221 (378)
Q Consensus 158 ~sp~g~~l-~t~~~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~-------------~~~~~~~~~~~~~~~~~~ 221 (378)
|+|+|+++ ++++.|+.|++||+++++++..+ +..+.+++|+|+|.+ .+|+......+..+.. +
T Consensus 165 ~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~ 243 (391)
T 1l0q_A 165 VTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV-G 243 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC-C
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEec-C
Confidence 99999887 57778999999999999988877 567899999999875 3444455555555554 3
Q ss_pred CcceeeeEEcCCCCeE-EEecCCCeEEEEEcCC
Q 046394 222 GYQIGKVSFRPYEDVL-GIGHSMGVSGILIPGS 253 (378)
Q Consensus 222 ~~~v~~~~~sp~g~~l-~~~~~~g~~~~~~~~s 253 (378)
..+.++.|+|+|++| ++++.++.+.+|...+
T Consensus 244 -~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 244 -PDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp -SSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred -CCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 347899999999876 5667777777665443
No 101
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.94 E-value=2.9e-24 Score=195.50 Aligned_cols=213 Identities=12% Similarity=0.081 Sum_probs=173.8
Q ss_pred eeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC-C------eEEeeccCCCe-eEEEE--E----------EE
Q 046394 37 NQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG-T------ELHCSKEHGEV-LKLQF--L----------LA 96 (378)
Q Consensus 37 ~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~-~------~~~~~~~~~~~-~~l~~--~----------l~ 96 (378)
....+.+|...|++++|+| ++|++|+.||.|++||... . .+..+.+|... .+++| - |+
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 3456788999999999999 7999999999999999544 3 47888888865 77766 3 78
Q ss_pred EEeCCCeEEEEEcCCCcE-----EEEEecC-----CCCeeEEEEc----CCCCE-EEEEcCCCe-----e----------
Q 046394 97 SINKLGQLRYQNVTMGEI-----VGNFWTG-----LGRTDVIRVN----PFNGV-VSLGHSGGT-----M---------- 146 (378)
Q Consensus 97 s~~~d~~i~iwd~~~~~~-----~~~~~~~-----~~~v~~~~~s----~~~~~-l~~~~~d~~-----~---------- 146 (378)
+++.|+.|++||+.+++. +..+..+ ...|.+++|+ |++.+ |++++.++. +
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 899999999999998886 8888888 4899999999 99999 999998886 1
Q ss_pred -----------------eecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee-c--------CCceEEEEecC
Q 046394 147 -----------------LCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL-P--------GHAKTLDFSRK 200 (378)
Q Consensus 147 -----------------~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~-~--------~~i~~~~~sp~ 200 (378)
..|...|.+++|+|++ +|++++.|+.|++||+++++++..+ . ..+.+++|+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~ 244 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 244 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCC
Confidence 1267789999999999 9999999999999999999888776 2 35899999998
Q ss_pred CCc-------------cccCCCCCceEEEeecc------------CCcceeeeEEcCCCCeEEEecCCCeEEEEEcC
Q 046394 201 DSG-------------DFSGSHNYNRYMGYSMV------------KGYQIGKVSFRPYEDVLGIGHSMGVSGILIPG 252 (378)
Q Consensus 201 g~~-------------~~~~~~~~~~~~~~~~~------------~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~~ 252 (378)
+.+ .+|+.....++..+... |...|.+++|+|++.+|++++.||.+.+|...
T Consensus 245 ~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 245 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred CCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 764 45666666666666542 67789999999999999998888877777543
No 102
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=8.8e-25 Score=199.29 Aligned_cols=215 Identities=18% Similarity=0.234 Sum_probs=167.7
Q ss_pred ccceeeeeecccceeeEEeecCCCCceEEEEcC-CCCEEEEEeCCCcEEEEeCCC-CeEEee-------------ccCCC
Q 046394 23 QEAIAREVDILSSRNQYDIMLPELGPYTLDFTS-SGRYMAAAGCKGYPYFYNRDG-TELHCS-------------KEHGE 87 (378)
Q Consensus 23 ~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp-~g~~l~~~~~dg~i~iwd~~~-~~~~~~-------------~~~~~ 87 (378)
.+..+++|++.++.....+.+|...|.+++|+| ++++|++|+.||.|++||... .....+ .+|..
T Consensus 21 ~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (408)
T 4a11_B 21 AESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY 100 (408)
T ss_dssp HHHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS
T ss_pred ccCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC
Confidence 456788999999998899999999999999999 999999999999999999543 222222 24665
Q ss_pred e-eEEEE------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCC---CEEEEEcCCCe------------
Q 046394 88 V-LKLQF------LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFN---GVVSLGHSGGT------------ 145 (378)
Q Consensus 88 ~-~~l~~------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~d~~------------ 145 (378)
. .+++| +|++++.|+.|++||+.+++.+..+. +...+.++.|+|.+ .++++++.++.
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 179 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS 179 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee
Confidence 5 99999 89999999999999999999888876 67889999999955 49999998887
Q ss_pred --eeecCCCEEEEEEecCCC-EEEEEECCCeEEEEEcCCce-eeeeecCCceEEEEecCCCccccCCCCCceEEEeeccC
Q 046394 146 --MLCHQGPVSALAFHPNGH-LMATSGKDCKIKIWDLRKYE-VLQTLPGHAKTLDFSRKDSGDFSGSHNYNRYMGYSMVK 221 (378)
Q Consensus 146 --~~~h~~~v~~~~~sp~g~-~l~t~~~d~~i~iwd~~~~~-~~~~~~~~i~~~~~sp~g~~~~~~~~~~~~~~~~~~~~ 221 (378)
+.+|...|.+++|+|++. +|++++.||.|++||++++. ++..+... .+ ............ |
T Consensus 180 ~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~--------~~------~~~~~~~~~~~~-~ 244 (408)
T 4a11_B 180 HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQH--------NG------KKSQAVESANTA-H 244 (408)
T ss_dssp EEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTT--------TT------CSCCCTTTSSCS-C
T ss_pred eeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccccc--------cc------ccceeecccccc-c
Confidence 667999999999999998 58999999999999998865 33332100 00 000111112223 6
Q ss_pred CcceeeeEEcCCCCeEEEecCCCeEEEEEcCC
Q 046394 222 GYQIGKVSFRPYEDVLGIGHSMGVSGILIPGS 253 (378)
Q Consensus 222 ~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~~s 253 (378)
...|++++|+|+|.+|++++.||.+.+|....
T Consensus 245 ~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (408)
T 4a11_B 245 NGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSN 276 (408)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred cCceeEEEEcCCCCEEEEecCCCeEEEEECCC
Confidence 67788888998888888888888887776443
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.93 E-value=5e-24 Score=194.60 Aligned_cols=194 Identities=11% Similarity=0.133 Sum_probs=164.7
Q ss_pred CceeeEEEeccceeeeeecccc-------eeeEEeecCCCCceEEEEcCCC-CEEEEEeCCCcEEEEe-CCCCeEEee--
Q 046394 14 GVEKTWRIKQEAIAREVDILSS-------RNQYDIMLPELGPYTLDFTSSG-RYMAAAGCKGYPYFYN-RDGTELHCS-- 82 (378)
Q Consensus 14 ~~~~~~~~~~~~~i~~~d~~~~-------~~~~~l~~~~~~v~~~~~sp~g-~~l~~~~~dg~i~iwd-~~~~~~~~~-- 82 (378)
+....+....|+.|++||+.++ ..+..+.+|...|.+++|+|++ ++|++|+.||.|++|| .++..+..+
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 172 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP 172 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec
Confidence 3445666777899999999988 6688899999999999999998 6999999999999999 566777788
Q ss_pred ccCCCe-eEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEE-ecCCCC-eeEEEEcCCCCEEEEE---cCCCe------
Q 046394 83 KEHGEV-LKLQF-----LLASINKLGQLRYQNVTMGEIVGNF-WTGLGR-TDVIRVNPFNGVVSLG---HSGGT------ 145 (378)
Q Consensus 83 ~~~~~~-~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~-v~~~~~s~~~~~l~~~---~~d~~------ 145 (378)
..|... .+++| +|++++.|+.|++||+++++.+..+ ..|.+. +.++.|+|++.+|++| +.++.
T Consensus 173 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~ 252 (402)
T 2aq5_A 173 DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDT 252 (402)
T ss_dssp TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEET
T ss_pred CCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcC
Confidence 778776 99999 8999999999999999999999888 677665 8999999999999999 66766
Q ss_pred ----------eeecCCCEEEEEEecCCCEEEEE-ECCCeEEEEEcCCcee-eeee-----cCCceEEEEecCCCccccC
Q 046394 146 ----------MLCHQGPVSALAFHPNGHLMATS-GKDCKIKIWDLRKYEV-LQTL-----PGHAKTLDFSRKDSGDFSG 207 (378)
Q Consensus 146 ----------~~~h~~~v~~~~~sp~g~~l~t~-~~d~~i~iwd~~~~~~-~~~~-----~~~i~~~~~sp~g~~~~~~ 207 (378)
...|...|.+++|+|++++|+++ +.|+.|++||+.+++. +..+ ...+.+++|+|++.+.+..
T Consensus 253 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~ 331 (402)
T 2aq5_A 253 KHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNK 331 (402)
T ss_dssp TBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGG
T ss_pred ccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceec
Confidence 12467789999999999998755 4799999999998874 4333 3789999999999886654
No 104
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.93 E-value=1.6e-24 Score=193.13 Aligned_cols=207 Identities=9% Similarity=0.025 Sum_probs=167.2
Q ss_pred eecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC-C---eEEeeccCCCe-eEEEE------EEEEEeCCCeEEEEEc
Q 046394 41 IMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG-T---ELHCSKEHGEV-LKLQF------LLASINKLGQLRYQNV 109 (378)
Q Consensus 41 l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~-~---~~~~~~~~~~~-~~l~~------~l~s~~~d~~i~iwd~ 109 (378)
..+|...|++++|+|++.+|++|+.||.|++||... . ....+..|... .+++| +|++++.|+.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 357889999999999999999999999999999543 3 25556677765 99999 4899999999999999
Q ss_pred -CCCcEEEEEec--CCCCeeEEEEcCCCCEEEEEcCCCe-------e---------------eecCCCEEEEEEecCCCE
Q 046394 110 -TMGEIVGNFWT--GLGRTDVIRVNPFNGVVSLGHSGGT-------M---------------LCHQGPVSALAFHPNGHL 164 (378)
Q Consensus 110 -~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d~~-------~---------------~~h~~~v~~~~~sp~g~~ 164 (378)
.+++. ..+.. |...|.+++|+| +.+|++++.|+. . ..|...|.+++|+|++
T Consensus 87 ~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-- 162 (342)
T 1yfq_A 87 IGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-- 162 (342)
T ss_dssp SSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--
T ss_pred ccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--
Confidence 87765 67777 999999999999 999999999987 1 1267889999999987
Q ss_pred EEEEECCCeEEEEEcCC-ceee-eee----cCCceEEEEec-CCCc----------cccCCCCC------ceEEEeeccC
Q 046394 165 MATSGKDCKIKIWDLRK-YEVL-QTL----PGHAKTLDFSR-KDSG----------DFSGSHNY------NRYMGYSMVK 221 (378)
Q Consensus 165 l~t~~~d~~i~iwd~~~-~~~~-~~~----~~~i~~~~~sp-~g~~----------~~~~~~~~------~~~~~~~~~~ 221 (378)
+++++.|+.|++||+++ +... ... ...+.+++|+| ++.+ .+|+.... .....+.. |
T Consensus 163 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~-~ 241 (342)
T 1yfq_A 163 LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC-H 241 (342)
T ss_dssp EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEEC-C
T ss_pred EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeec-c
Confidence 99999999999999998 5542 212 46899999999 8764 45544443 55556665 5
Q ss_pred Cc---------ceeeeEEcCCCCeEEEecCCCeEEEEEcC
Q 046394 222 GY---------QIGKVSFRPYEDVLGIGHSMGVSGILIPG 252 (378)
Q Consensus 222 ~~---------~v~~~~~sp~g~~l~~~~~~g~~~~~~~~ 252 (378)
.. +|++++|+|++.+|++++.+|.+.+|...
T Consensus 242 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp CCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred cccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc
Confidence 43 89999999999999988888877666543
No 105
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=5.4e-24 Score=184.52 Aligned_cols=218 Identities=10% Similarity=-0.028 Sum_probs=153.7
Q ss_pred ceeeEEEeccceeeeeecccc---eeeEEeecCCCC-------------------------ceEEEEcCC----CCEEEE
Q 046394 15 VEKTWRIKQEAIAREVDILSS---RNQYDIMLPELG-------------------------PYTLDFTSS----GRYMAA 62 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~---~~~~~l~~~~~~-------------------------v~~~~~sp~----g~~l~~ 62 (378)
.+-.+..-....|++|+..++ ++++++.+|..+ |.+++|+|| +.++++
T Consensus 53 ~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s 132 (356)
T 2w18_A 53 KEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLK 132 (356)
T ss_dssp CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEE
T ss_pred CccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEe
Confidence 344455556788999999999 888888888653 456777778 777776
Q ss_pred EeC--------------------CCcEEEEeC--CCCeEEeeccCCCe-eEEEE--------EEEEEeCCCeEEEEEcCC
Q 046394 63 AGC--------------------KGYPYFYNR--DGTELHCSKEHGEV-LKLQF--------LLASINKLGQLRYQNVTM 111 (378)
Q Consensus 63 ~~~--------------------dg~i~iwd~--~~~~~~~~~~~~~~-~~l~~--------~l~s~~~d~~i~iwd~~~ 111 (378)
++. |+.|++|++ +|+.+..+.+|... ..++| +|++++.|++|+|||+.+
T Consensus 133 ~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~T 212 (356)
T 2w18_A 133 SGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKT 212 (356)
T ss_dssp EEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTT
T ss_pred CCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCC
Confidence 553 888999993 46777778888765 66677 699999999999999999
Q ss_pred CcEEEEEecCC---CCeeEEEEcCCCCEEEEEcCCCeeeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee
Q 046394 112 GEIVGNFWTGL---GRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188 (378)
Q Consensus 112 ~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~ 188 (378)
|+++.++..|. ..+.+++|+|+|.++++++.+. ....+++|+.|++|++||..+++++..+
T Consensus 213 Gk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~----------------~~w~laSGs~D~tIklWd~~tgk~l~v~ 276 (356)
T 2w18_A 213 GQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPC----------------AKESESLRSPVFQLIVINPKTTLSVGVM 276 (356)
T ss_dssp CCEEEEEECCC---CCCEEEEEEETTEEEEEEC----------------------------CCEEEEEEETTTTEEEEEE
T ss_pred CcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCC----------------CcceeeccCCCcEEEEEECCCCEEEEEE
Confidence 99999987643 3566677888877766543211 0114688999999999999999876554
Q ss_pred ----c-CC---c--------eEEEEecCCCccccCCCCCceEEEeeccCCccee-eeEEcCCCCeEEEecCCCeEEEE
Q 046394 189 ----P-GH---A--------KTLDFSRKDSGDFSGSHNYNRYMGYSMVKGYQIG-KVSFRPYEDVLGIGHSMGVSGIL 249 (378)
Q Consensus 189 ----~-~~---i--------~~~~~sp~g~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~sp~g~~l~~~~~~g~~~~~ 249 (378)
+ +. + ..++.+.|+...+|+..+++.+..+.+ |...+. .++|+|||++|++|+.|+.+++|
T Consensus 277 ~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~g-H~~~vvs~vafSPDG~~LaSGS~D~TIklW 353 (356)
T 2w18_A 277 LYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPP-VSDQHWSFVKWSGTDSHLLAGQKDGNIFVY 353 (356)
T ss_dssp EECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECC-C--CCCCEEEECSSSSEEEEECTTSCEEEE
T ss_pred EeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecC-CCCCeEEEEEECCCCCEEEEEECCCcEEEe
Confidence 1 11 1 356777899999999999999999887 655444 58999999887777777655554
No 106
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5e-24 Score=192.33 Aligned_cols=195 Identities=12% Similarity=0.118 Sum_probs=164.0
Q ss_pred eeeEEEeccceeeeeecc--cceeeEEeecCCCCceEEEEcCC--CCEEEEEeCCCcEEEEeCC-CC--eEEeeccCCCe
Q 046394 16 EKTWRIKQEAIAREVDIL--SSRNQYDIMLPELGPYTLDFTSS--GRYMAAAGCKGYPYFYNRD-GT--ELHCSKEHGEV 88 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~--~~~~~~~l~~~~~~v~~~~~sp~--g~~l~~~~~dg~i~iwd~~-~~--~~~~~~~~~~~ 88 (378)
...+....++.|++||+. ++.....+.+|...|.+++|+|+ +.+|++|+.||.|++||.. +. .+..+..|...
T Consensus 24 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 103 (379)
T 3jrp_A 24 KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSAS 103 (379)
T ss_dssp SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC
T ss_pred CEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcc
Confidence 445566678999999998 67778889999999999999987 8999999999999999954 43 56777778765
Q ss_pred -eEEEE-------EEEEEeCCCeEEEEEcCCCc--EEEEEecCCCCeeEEEEcC-------------CCCEEEEEcCCCe
Q 046394 89 -LKLQF-------LLASINKLGQLRYQNVTMGE--IVGNFWTGLGRTDVIRVNP-------------FNGVVSLGHSGGT 145 (378)
Q Consensus 89 -~~l~~-------~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~s~-------------~~~~l~~~~~d~~ 145 (378)
.+++| ++++++.|+.|++||+.++. ....+..|...|.+++|+| ++.+|++++.|+.
T Consensus 104 v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 183 (379)
T 3jrp_A 104 VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL 183 (379)
T ss_dssp EEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSC
T ss_pred eEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCe
Confidence 99999 79999999999999998873 4556778899999999999 6899999999987
Q ss_pred ------------------eeecCCCEEEEEEecC---CCEEEEEECCCeEEEEEcCCcee---eeee-----cCCceEEE
Q 046394 146 ------------------MLCHQGPVSALAFHPN---GHLMATSGKDCKIKIWDLRKYEV---LQTL-----PGHAKTLD 196 (378)
Q Consensus 146 ------------------~~~h~~~v~~~~~sp~---g~~l~t~~~d~~i~iwd~~~~~~---~~~~-----~~~i~~~~ 196 (378)
+.+|...|.+++|+|+ +.+|++++.||.|+|||++++.. ...+ ...+++++
T Consensus 184 i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 263 (379)
T 3jrp_A 184 VKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRAS 263 (379)
T ss_dssp EEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEE
T ss_pred EEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEE
Confidence 4568999999999999 89999999999999999998631 1111 36789999
Q ss_pred EecCCCccccCCCC
Q 046394 197 FSRKDSGDFSGSHN 210 (378)
Q Consensus 197 ~sp~g~~~~~~~~~ 210 (378)
|+|+|.+.+....+
T Consensus 264 ~s~~g~~l~~~~~d 277 (379)
T 3jrp_A 264 WSLSGNVLALSGGD 277 (379)
T ss_dssp ECSSSCCEEEEESS
T ss_pred EcCCCCEEEEecCC
Confidence 99999876654443
No 107
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.93 E-value=8.2e-24 Score=186.40 Aligned_cols=195 Identities=18% Similarity=0.212 Sum_probs=153.9
Q ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeec--cCCCe-eEEEE-----EEEEEeCCCeEEEEEcCCCcEEEE
Q 046394 47 GPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSK--EHGEV-LKLQF-----LLASINKLGQLRYQNVTMGEIVGN 117 (378)
Q Consensus 47 ~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~--~~~~~-~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~ 117 (378)
..++|+||+++ +||+| .|++|+||| .++..+..+. +|... ++++| ++++|+.|++|++||+.+++.+..
T Consensus 27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred cceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 35789999986 77776 489999999 5677777665 45554 99999 999999999999999999999999
Q ss_pred EecCCCCeeEEEEcCCCCEEEEEcCCCe---------------eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCc
Q 046394 118 FWTGLGRTDVIRVNPFNGVVSLGHSGGT---------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKY 182 (378)
Q Consensus 118 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~---------------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~ 182 (378)
+..|...+.++ ++++..+++++.++. +.+|...+..+.+++++++|++++.|++|+|||++++
T Consensus 105 ~~~h~~~~~~~--~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 105 MTSHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp EECCSSCEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCB
T ss_pred ecCccceEEEe--ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCC
Confidence 99988877665 456679999999887 6689999999999999999999999999999999987
Q ss_pred eeeeee-------cCCceEEEEecCCCc-------------cccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEec-
Q 046394 183 EVLQTL-------PGHAKTLDFSRKDSG-------------DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGH- 241 (378)
Q Consensus 183 ~~~~~~-------~~~i~~~~~sp~g~~-------------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~- 241 (378)
+..... ...+.++.++|++.. .+|+........... +...+..+.|+|++..+++++
T Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~sg 260 (318)
T 4ggc_A 183 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--AHSQVCSILWSPHYKELISGHG 260 (318)
T ss_dssp TTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEEETTTTEEEEEEC
T ss_pred cccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc--ceeeeeeeeecccccceEEEEE
Confidence 643222 367888999887653 455555555544433 566799999999998876543
Q ss_pred -CCCeEE
Q 046394 242 -SMGVSG 247 (378)
Q Consensus 242 -~~g~~~ 247 (378)
.||.+.
T Consensus 261 ~~d~~i~ 267 (318)
T 4ggc_A 261 FAQNQLV 267 (318)
T ss_dssp TTTCCEE
T ss_pred cCCCEEE
Confidence 455443
No 108
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.93 E-value=7.1e-24 Score=194.78 Aligned_cols=213 Identities=19% Similarity=0.255 Sum_probs=171.4
Q ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeec--cCCC-eeEEEE-----EEEEEeCCCeEEEEEcCCCcEEEE
Q 046394 47 GPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSK--EHGE-VLKLQF-----LLASINKLGQLRYQNVTMGEIVGN 117 (378)
Q Consensus 47 ~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~--~~~~-~~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~ 117 (378)
.++.|+||++ ++||+|. |++|+||| .+|..+..+. +|.. +++++| +|++|+.|++|++||+.+++.+..
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 4678999985 5788775 89999999 5666666554 5555 499999 999999999999999999999999
Q ss_pred EecCCCCeeEEEEcCCCCEEEEEcCCCe---------------eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCc
Q 046394 118 FWTGLGRTDVIRVNPFNGVVSLGHSGGT---------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKY 182 (378)
Q Consensus 118 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~---------------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~ 182 (378)
+..|...+.++.++ +.+|++|+.++. +.+|...+..+.|+|+|.++++++.|+.|+|||+.++
T Consensus 185 ~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 185 MTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp ECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred EeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 99999999888774 679999999987 6789999999999999999999999999999999876
Q ss_pred ee----eeee---cCCceEEEEecCCC-------------ccccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEec-
Q 046394 183 EV----LQTL---PGHAKTLDFSRKDS-------------GDFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGH- 241 (378)
Q Consensus 183 ~~----~~~~---~~~i~~~~~sp~g~-------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~- 241 (378)
+. +... ...|.+++|+|++. ..+|+..++.+...+.. ...+.++.|+|++..|++++
T Consensus 263 ~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~--~~~v~~~~~~~~~~~lv~~sg 340 (420)
T 4gga_A 263 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA--HSQVCSILWSPHYKELISGHG 340 (420)
T ss_dssp SSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC--SSCEEEEEEETTTTEEEEEEC
T ss_pred cccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc--ccceeeeeecCCCCeEEEEEe
Confidence 54 2333 46789999998654 36777777777776654 45689999999999887654
Q ss_pred -CCCeEE------------------------------EEEcCCCCcccccccCCC
Q 046394 242 -SMGVSG------------------------------ILIPGSGEPNFDSWVANP 265 (378)
Q Consensus 242 -~~g~~~------------------------------~~~~~s~d~~i~~w~~~~ 265 (378)
.||.+. ++++++.|++|++|++..
T Consensus 341 ~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 341 FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 566443 356677777777777543
No 109
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.93 E-value=4.1e-24 Score=191.86 Aligned_cols=220 Identities=10% Similarity=0.060 Sum_probs=146.6
Q ss_pred eeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccCCCeeEEEE------EEEEEeCCC
Q 046394 29 EVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEVLKLQF------LLASINKLG 102 (378)
Q Consensus 29 ~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~l~~------~l~s~~~d~ 102 (378)
+|++.+...+..+..|...|.+++|+|||++|++|+.+| ++|||...........+.++..+.+ ++++++.|+
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 81 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKE 81 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTT
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCcc
Confidence 456667777777889999999999999999999998775 7899954333222222234445555 456778889
Q ss_pred eEEEEEcCCCcEEEEEecCCCCeeEEEEcCCC-----------------------------------CEEEE--EcCCCe
Q 046394 103 QLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFN-----------------------------------GVVSL--GHSGGT 145 (378)
Q Consensus 103 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-----------------------------------~~l~~--~~~d~~ 145 (378)
+|++||+.+++++..+. +...|.+++|+++. .++++ |+.+|.
T Consensus 82 ~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~ 160 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQ 160 (355)
T ss_dssp EEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTC
T ss_pred EEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcE
Confidence 99999999999988886 55688888888753 23333 344443
Q ss_pred ------------------------------eeecCCCEEEEEEecCCCEEEEEECCCe-EEEEEcCCceeeeee-----c
Q 046394 146 ------------------------------MLCHQGPVSALAFHPNGHLMATSGKDCK-IKIWDLRKYEVLQTL-----P 189 (378)
Q Consensus 146 ------------------------------~~~h~~~v~~~~~sp~g~~l~t~~~d~~-i~iwd~~~~~~~~~~-----~ 189 (378)
+.+|.+.|++++|+|+|++|++++.|++ |+|||+++++++.++ .
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~ 240 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR 240 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC
Confidence 3468899999999999999999999998 999999999998877 2
Q ss_pred CCceEEEEecCCCc----------cccCCCCCceEE--E--------------------eeccCCcceeeeEEcCCCCeE
Q 046394 190 GHAKTLDFSRKDSG----------DFSGSHNYNRYM--G--------------------YSMVKGYQIGKVSFRPYEDVL 237 (378)
Q Consensus 190 ~~i~~~~~sp~g~~----------~~~~~~~~~~~~--~--------------------~~~~~~~~v~~~~~sp~g~~l 237 (378)
..|.+++|+|+|.+ .+|+........ . +......+...++|+|+|..|
T Consensus 241 ~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l 320 (355)
T 3vu4_A 241 ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLV 320 (355)
T ss_dssp SCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEE
T ss_pred CcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEE
Confidence 57999999999886 444433221000 0 000011223668899999888
Q ss_pred EEecCCCeEEEEE
Q 046394 238 GIGHSMGVSGILI 250 (378)
Q Consensus 238 ~~~~~~g~~~~~~ 250 (378)
++++.||.+.+|.
T Consensus 321 ~~~~~dg~~~~~~ 333 (355)
T 3vu4_A 321 VVWPHTRMIETFK 333 (355)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEEeCCCeEEEEE
Confidence 8887777665553
No 110
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=6.5e-24 Score=191.27 Aligned_cols=159 Identities=15% Similarity=0.175 Sum_probs=133.4
Q ss_pred eccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEe--eccCCCe-eEEEE-----
Q 046394 22 KQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHC--SKEHGEV-LKLQF----- 93 (378)
Q Consensus 22 ~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~-~~l~~----- 93 (378)
..|++|++||+.+++.+..+. |...|.+++|+|||++|++++.++.+.+|..++..+.. ...|... .+++|
T Consensus 154 ~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~ 232 (365)
T 4h5i_A 154 KVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT 232 (365)
T ss_dssp CSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE
T ss_pred CCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC
Confidence 357899999999999998886 56889999999999999999866544444477766543 4556665 88999
Q ss_pred EEEEEeCCC----eEEEEEcCCCcE----EEEEecCCCCeeEEEEcCCCCEEEEEcCCCe---------------eeecC
Q 046394 94 LLASINKLG----QLRYQNVTMGEI----VGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT---------------MLCHQ 150 (378)
Q Consensus 94 ~l~s~~~d~----~i~iwd~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~---------------~~~h~ 150 (378)
.+++++.|+ .+.+||+..... ...+..|...|++++|+|+|++||+|+.|+. +.+|.
T Consensus 233 ~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~ 312 (365)
T 4h5i_A 233 VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHS 312 (365)
T ss_dssp EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSS
T ss_pred EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCccc
Confidence 788888776 688999877653 3456788899999999999999999999997 35799
Q ss_pred CCEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q 046394 151 GPVSALAFHPNGHLMATSGKDCKIKIWDLRK 181 (378)
Q Consensus 151 ~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~ 181 (378)
.+|++++|+|||++|||+|.|++|+|||+..
T Consensus 313 ~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 313 FAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 9999999999999999999999999999964
No 111
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=1.8e-23 Score=192.55 Aligned_cols=225 Identities=10% Similarity=0.001 Sum_probs=176.8
Q ss_pred eccceeeeeecccceeeE-----EeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeC-CCCeEEeeccCCCe-eEEEE-
Q 046394 22 KQEAIAREVDILSSRNQY-----DIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNR-DGTELHCSKEHGEV-LKLQF- 93 (378)
Q Consensus 22 ~~~~~i~~~d~~~~~~~~-----~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~-~~~~~~~~~~~~~~-~~l~~- 93 (378)
..++.|++||+.+++... .+.+|...|.+++|+|++.++++++.|+.|++||. ++..+..+..|... .+++|
T Consensus 141 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 220 (433)
T 3bws_A 141 LEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYD 220 (433)
T ss_dssp TTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEE
T ss_pred CCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEc
Confidence 446789999999998876 45578889999999999999999999999999994 56777788777765 88999
Q ss_pred -----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcC--------CCe-------------ee
Q 046394 94 -----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHS--------GGT-------------ML 147 (378)
Q Consensus 94 -----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--------d~~-------------~~ 147 (378)
++++++.|+.|.+||+.+++.+..+.. ...+.+++|+|++..+++++. ++. ..
T Consensus 221 ~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~ 299 (433)
T 3bws_A 221 PIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI 299 (433)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec
Confidence 446666899999999999998887765 456899999999999888873 444 33
Q ss_pred ecCCCEEEEEEecCCCEE-EEEECCCeEEEEEcCCceeeeee--cCCceEEEEecCCCcc--------------------
Q 046394 148 CHQGPVSALAFHPNGHLM-ATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSGD-------------------- 204 (378)
Q Consensus 148 ~h~~~v~~~~~sp~g~~l-~t~~~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~~-------------------- 204 (378)
.|...+.+++|+|+++.+ ++++.|+.|++||+.+++.+..+ ...+.+++|+|+|.+.
T Consensus 300 ~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~ 379 (433)
T 3bws_A 300 GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLV 379 (433)
T ss_dssp EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSS
T ss_pred cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCcccccccccccc
Confidence 456688999999999754 66689999999999999988887 5778999999998742
Q ss_pred -----ccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecC-CCeEEEE
Q 046394 205 -----FSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHS-MGVSGIL 249 (378)
Q Consensus 205 -----~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~-~g~~~~~ 249 (378)
+|+..+...+..+.. ...+.+++|+|+|++|++++. ++.+.+|
T Consensus 380 dg~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~d~~i~v~ 428 (433)
T 3bws_A 380 LGKVYVIDTTTDTVKEFWEA--GNQPTGLDVSPDNRYLVISDFLDHQIRVY 428 (433)
T ss_dssp CCEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSCEEEEEETTTTEEEEE
T ss_pred ceEEEEEECCCCcEEEEecC--CCCCceEEEcCCCCEEEEEECCCCeEEEE
Confidence 233334444444443 456899999999988776553 6654444
No 112
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.93 E-value=5.5e-23 Score=182.87 Aligned_cols=195 Identities=17% Similarity=0.212 Sum_probs=156.4
Q ss_pred ceeeEEEeccceeeeeecccce-----eeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-----------
Q 046394 15 VEKTWRIKQEAIAREVDILSSR-----NQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTE----------- 78 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~-----~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~----------- 78 (378)
....+..+.|+.|++||+.+.+ ....+.+|...|.+++|+|+|++|++|+.|+.|++|+.....
T Consensus 51 ~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~ 130 (340)
T 4aow_A 51 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 130 (340)
T ss_dssp TTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred CCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCc
Confidence 3456677888999999987653 456788999999999999999999999999999888842110
Q ss_pred ---------------------------------EEeeccCCCe-eEEEE-------EEEEEeCCCeEEEEEcCCCcEEEE
Q 046394 79 ---------------------------------LHCSKEHGEV-LKLQF-------LLASINKLGQLRYQNVTMGEIVGN 117 (378)
Q Consensus 79 ---------------------------------~~~~~~~~~~-~~l~~-------~l~s~~~d~~i~iwd~~~~~~~~~ 117 (378)
...+.+|... ..++| ++++++.|+.|++||+.+++.+..
T Consensus 131 ~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~ 210 (340)
T 4aow_A 131 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 210 (340)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEE
T ss_pred eeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeE
Confidence 0112234433 56666 788999999999999999999999
Q ss_pred EecCCCCeeEEEEcCCCCEEEEEcCCCe-------------eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCcee
Q 046394 118 FWTGLGRTDVIRVNPFNGVVSLGHSGGT-------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEV 184 (378)
Q Consensus 118 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~-------------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~ 184 (378)
+..|.+.|.+++|+|++.+|++++.|+. ...+...|.+++|+|++. +++++.|+.|+|||++++..
T Consensus 211 ~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~ 289 (340)
T 4aow_A 211 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRY-WLCAATGPSIKIWDLEGKII 289 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCc-eeeccCCCEEEEEECCCCeE
Confidence 9999999999999999999999999998 334567899999999886 45566799999999998877
Q ss_pred eeee------------cCCceEEEEecCCCccccCCCC
Q 046394 185 LQTL------------PGHAKTLDFSRKDSGDFSGSHN 210 (378)
Q Consensus 185 ~~~~------------~~~i~~~~~sp~g~~~~~~~~~ 210 (378)
+..+ ...|++++|+|+|.+.+....+
T Consensus 290 ~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 327 (340)
T 4aow_A 290 VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD 327 (340)
T ss_dssp EEEECCC-------CCCCCEEEEEECTTSSEEEEEETT
T ss_pred EEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC
Confidence 6654 2568999999999876654433
No 113
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2e-23 Score=193.55 Aligned_cols=204 Identities=12% Similarity=0.033 Sum_probs=166.0
Q ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCC---eEEeeccCC-----------------------------------
Q 046394 46 LGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGT---ELHCSKEHG----------------------------------- 86 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~---~~~~~~~~~----------------------------------- 86 (378)
.++.+++|+|+|++|+++ .++.|++|| .+|. .+..+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 478899999999966665 578999999 5666 555544322
Q ss_pred --------------------CeeEEEE-----E-EEEEeCCCeEEEEEcC--CCcEEEEEe--cCCCCeeEEEEcCCCCE
Q 046394 87 --------------------EVLKLQF-----L-LASINKLGQLRYQNVT--MGEIVGNFW--TGLGRTDVIRVNPFNGV 136 (378)
Q Consensus 87 --------------------~~~~l~~-----~-l~s~~~d~~i~iwd~~--~~~~~~~~~--~~~~~v~~~~~s~~~~~ 136 (378)
.+.+++| + +++++.|+.|++||+. ++..+..+. .+...|.+++|+|++.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 2488888 5 5899999999999999 888888776 56788999999999999
Q ss_pred EEEEcCCCe------------------eeecCCCEEEEEEecC---CCEEEEEECCCeEEEEEcCCceeeeee----cCC
Q 046394 137 VSLGHSGGT------------------MLCHQGPVSALAFHPN---GHLMATSGKDCKIKIWDLRKYEVLQTL----PGH 191 (378)
Q Consensus 137 l~~~~~d~~------------------~~~h~~~v~~~~~sp~---g~~l~t~~~d~~i~iwd~~~~~~~~~~----~~~ 191 (378)
|++++.++. +.+|...|++++|+|+ +++|++++.|++|++||+.++.++..+ ...
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~ 243 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF 243 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc
Confidence 999998776 3568899999999999 999999999999999999999888774 368
Q ss_pred ceEEEEecCCCc----------cccCCCCCceEEEeec------------------------cCCcceeeeEEcCCCCeE
Q 046394 192 AKTLDFSRKDSG----------DFSGSHNYNRYMGYSM------------------------VKGYQIGKVSFRPYEDVL 237 (378)
Q Consensus 192 i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~------------------------~~~~~v~~~~~sp~g~~l 237 (378)
|.+++|+ +|.+ .+|+..++.++..+.. .....|.++.|+|++.+|
T Consensus 244 v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 322 (450)
T 2vdu_B 244 VSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV 322 (450)
T ss_dssp EEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred eEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence 9999999 8775 6777777776666542 123568899999999999
Q ss_pred EEec-CCCeEEEEEc
Q 046394 238 GIGH-SMGVSGILIP 251 (378)
Q Consensus 238 ~~~~-~~g~~~~~~~ 251 (378)
++++ .++.+.+|..
T Consensus 323 ~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 323 AFFVEATKCIIILEM 337 (450)
T ss_dssp EEEETTCSEEEEEEE
T ss_pred EEEECCCCeEEEEEe
Confidence 8887 7787777765
No 114
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.7e-23 Score=209.04 Aligned_cols=201 Identities=15% Similarity=0.189 Sum_probs=163.9
Q ss_pred eecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccCCC-eeEEEE----EEEEEeCCCeEEEEEcCCCcEE
Q 046394 41 IMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGE-VLKLQF----LLASINKLGQLRYQNVTMGEIV 115 (378)
Q Consensus 41 l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~l~~----~l~s~~~d~~i~iwd~~~~~~~ 115 (378)
..+|...|++++|+|++++||+|+.||.|+||+..+........|.. +.+++| +|++++.|++|++||+.+++++
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~ 92 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVL 92 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEE
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEE
Confidence 45788999999999999999999999999999966554433334554 599999 7999999999999999999999
Q ss_pred EEEecCCCCeeEEEEcCCCCEEEEEcCCCe----------e---------------eecCCCEEEEEEecC-CCEEEEEE
Q 046394 116 GNFWTGLGRTDVIRVNPFNGVVSLGHSGGT----------M---------------LCHQGPVSALAFHPN-GHLMATSG 169 (378)
Q Consensus 116 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~----------~---------------~~h~~~v~~~~~sp~-g~~l~t~~ 169 (378)
..+. +...|++++|+|++.+|++|+.||. + .+|.++|++++|+|+ +..|++++
T Consensus 93 ~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~ 171 (902)
T 2oaj_A 93 TTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY 171 (902)
T ss_dssp EEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC
T ss_pred EEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEe
Confidence 8886 6688999999999999999999987 1 247889999999995 57899999
Q ss_pred CCCeEEEEEcCCceeeeee--c-------------------CCceEEEEecCCCc----------cccCCCCCceEEE--
Q 046394 170 KDCKIKIWDLRKYEVLQTL--P-------------------GHAKTLDFSRKDSG----------DFSGSHNYNRYMG-- 216 (378)
Q Consensus 170 ~d~~i~iwd~~~~~~~~~~--~-------------------~~i~~~~~sp~g~~----------~~~~~~~~~~~~~-- 216 (378)
.|+.| +||+++++++..+ + ..|++++|+|+|.+ .+|+..++.++..
T Consensus 172 ~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~ 250 (902)
T 2oaj_A 172 EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMART 250 (902)
T ss_dssp SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEEC
T ss_pred CCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEe
Confidence 99999 9999999988777 3 45999999998874 7788777666543
Q ss_pred e---ec------------cCCcceeeeEEc----CCC-CeEEEecCC
Q 046394 217 Y---SM------------VKGYQIGKVSFR----PYE-DVLGIGHSM 243 (378)
Q Consensus 217 ~---~~------------~~~~~v~~~~~s----p~g-~~l~~~~~~ 243 (378)
+ .. .+..+|++++|+ |++ .+|++|+.+
T Consensus 251 l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~ 297 (902)
T 2oaj_A 251 VFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSI 297 (902)
T ss_dssp SSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECS
T ss_pred ecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCC
Confidence 1 11 024479999995 444 467777554
No 115
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.5e-23 Score=193.17 Aligned_cols=212 Identities=9% Similarity=0.054 Sum_probs=148.1
Q ss_pred EeccceeeeeecccceeeEEee-cCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccCCC------eeEEEE
Q 046394 21 IKQEAIAREVDILSSRNQYDIM-LPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGE------VLKLQF 93 (378)
Q Consensus 21 ~~~~~~i~~~d~~~~~~~~~l~-~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------~~~l~~ 93 (378)
...++....|++.+++....+. .|...|.+++|||+|.+||+++.||.|++||..+ .+..+. |.. +.+++|
T Consensus 60 FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svaf 137 (588)
T 2j04_A 60 EFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEW 137 (588)
T ss_dssp EECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEE
T ss_pred ECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCCccccccEEEEEE
Confidence 3455666677777665433333 4567889999999999999999999999998655 556666 552 588888
Q ss_pred -----EEEEEeCCCeEEEEEcCCCc-------EEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecCCCEEEEEEecC
Q 046394 94 -----LLASINKLGQLRYQNVTMGE-------IVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPN 161 (378)
Q Consensus 94 -----~l~s~~~d~~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~v~~~~~sp~ 161 (378)
+|++|+.||+|++||+.++. .+.++..+. .+|...|.+++|+|+
T Consensus 138 SPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~------------------------~gh~~~V~sVawSPd 193 (588)
T 2j04_A 138 NPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSD------------------------AGSKDWVTHIVWYED 193 (588)
T ss_dssp CSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSC------------------------TTCCCCEEEEEEETT
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccc------------------------ccccccEEEEEEcCC
Confidence 89999999999999988775 255654332 256778888888888
Q ss_pred CCEEEEEECCCeEEEEEcCCcee---eeee---c-CCceEEEEecC--------CCccccCCCCCceEEEeeccCCccee
Q 046394 162 GHLMATSGKDCKIKIWDLRKYEV---LQTL---P-GHAKTLDFSRK--------DSGDFSGSHNYNRYMGYSMVKGYQIG 226 (378)
Q Consensus 162 g~~l~t~~~d~~i~iwd~~~~~~---~~~~---~-~~i~~~~~sp~--------g~~~~~~~~~~~~~~~~~~~~~~~v~ 226 (378)
| +++++.|++|++||+..+.. ..++ + ..|.+++|+ + +...+|+...........+ |...|.
T Consensus 194 g--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g~~LASa~~~tIkLWd~~~~~~~~~~~g-h~~~V~ 269 (588)
T 2j04_A 194 V--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-DYKVVLTCPGYVHKIDLKNYSISSLKTG-SLENFH 269 (588)
T ss_dssp E--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-TTEEEEECSSEEEEEETTTTEEEEEECS-CCSCCC
T ss_pred c--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-CCEEEEEeCCeEEEEECCCCeEEEEEcC-CCceEE
Confidence 7 77777788888888876653 2333 2 467777777 2 1125666555544222225 888899
Q ss_pred eeEE--cCCCCeEEEecCCCeEEEEEcC------------CCCcccccccC
Q 046394 227 KVSF--RPYEDVLGIGHSMGVSGILIPG------------SGEPNFDSWVA 263 (378)
Q Consensus 227 ~~~~--sp~g~~l~~~~~~g~~~~~~~~------------s~d~~i~~w~~ 263 (378)
++.| +|++..|++++.+|. .+|... +.|+++.+|+.
T Consensus 270 ~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~ 319 (588)
T 2j04_A 270 IIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWST 319 (588)
T ss_dssp EEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTT
T ss_pred EEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEEC
Confidence 9999 999989999998887 666521 12667777765
No 116
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.92 E-value=5.2e-23 Score=183.06 Aligned_cols=186 Identities=12% Similarity=0.040 Sum_probs=145.3
Q ss_pred EEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC-----CeEEeeccCCCe-eEEEE-------EEEEEeCCCeEE
Q 046394 39 YDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG-----TELHCSKEHGEV-LKLQF-------LLASINKLGQLR 105 (378)
Q Consensus 39 ~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~-~~l~~-------~l~s~~~d~~i~ 105 (378)
..+.+|...|++++|+|++++|++|+.||.|++||... ..+..+.+|... .+++| +|++++.|+.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 34678999999999999999999999999999999543 356677888876 99999 899999999999
Q ss_pred EEEcCCC---------cEEEEEecCCCCeeEEEEcCC--CCEEEEEcCCCe---------------------------ee
Q 046394 106 YQNVTMG---------EIVGNFWTGLGRTDVIRVNPF--NGVVSLGHSGGT---------------------------ML 147 (378)
Q Consensus 106 iwd~~~~---------~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~---------------------------~~ 147 (378)
+||+.++ +.+..+..|...|.+++|+|+ +.+|++++.|+. ..
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9999887 557777777777788888877 777777777776 01
Q ss_pred ecCCCEEEEEEecC---CCEEEEEECCCeEEEEEcCCceeeeeecCCceEEEEecCCCccccCCCCCceEEEeeccCCcc
Q 046394 148 CHQGPVSALAFHPN---GHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKDSGDFSGSHNYNRYMGYSMVKGYQ 224 (378)
Q Consensus 148 ~h~~~v~~~~~sp~---g~~l~t~~~d~~i~iwd~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~~~~~~~~~~~~~ 224 (378)
.|...+.+++|+|+ +.+|++++.|+.+.+|+...+.. ..+..+.+ |...
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~-h~~~ 216 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL---------------------------HVAAKLPG-HKSL 216 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE---------------------------EEEEECCC-CCSC
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce---------------------------eeeeecCC-CCcc
Confidence 46667777777775 77777777777776666544321 22445555 7888
Q ss_pred eeeeEEcCCC----CeEEEecCCCeEEEEEcC
Q 046394 225 IGKVSFRPYE----DVLGIGHSMGVSGILIPG 252 (378)
Q Consensus 225 v~~~~~sp~g----~~l~~~~~~g~~~~~~~~ 252 (378)
|++++|+|++ .+|++|+.||.+.+|...
T Consensus 217 i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 217 IRSISWAPSIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp EEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred eeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence 9999999998 788888888877777543
No 117
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.92 E-value=1.7e-22 Score=185.98 Aligned_cols=237 Identities=10% Similarity=0.044 Sum_probs=181.1
Q ss_pred eeeeeecccc--eeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeC-CCCeEE-----eeccCCCe-eEEEE---
Q 046394 26 IAREVDILSS--RNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNR-DGTELH-----CSKEHGEV-LKLQF--- 93 (378)
Q Consensus 26 ~i~~~d~~~~--~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~-~~~~~~-----~~~~~~~~-~~l~~--- 93 (378)
.+..+|..++ +.+..+..+ ..+.+++|+|++.++++++.++.|++||. ++..+. .+.+|.+. .+++|
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~ 180 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH 180 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGG
T ss_pred EEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCC
Confidence 4455555434 555666665 56779999997777888888999999995 456555 34567665 88999
Q ss_pred --EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEE-EcCCCe-------------eeecCCCEEEEE
Q 046394 94 --LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSL-GHSGGT-------------MLCHQGPVSALA 157 (378)
Q Consensus 94 --~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~d~~-------------~~~h~~~v~~~~ 157 (378)
++++++.|+.|++||+.+++.+..+..+...+.+++|+|++..+++ ++.++. ...+...+.+++
T Consensus 181 ~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 260 (433)
T 3bws_A 181 NELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLL 260 (433)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEE
T ss_pred CEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEE
Confidence 8899999999999999999999999888899999999999998754 446666 122345689999
Q ss_pred EecCCCEEEEEE--------CCCeEEEEEcCCceeeeee--cCCceEEEEecCCCc-----------cccCCCCCceEEE
Q 046394 158 FHPNGHLMATSG--------KDCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSG-----------DFSGSHNYNRYMG 216 (378)
Q Consensus 158 ~sp~g~~l~t~~--------~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~-----------~~~~~~~~~~~~~ 216 (378)
|+|+|+++++++ .|+.|++||+.+++.+..+ ...+.+++|+|+|.. .+|+..+......
T Consensus 261 ~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~ 340 (433)
T 3bws_A 261 LSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKS 340 (433)
T ss_dssp ECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEE
Confidence 999999999888 4889999999999888777 467889999999864 4555555555555
Q ss_pred eeccCCcceeeeEEcCCCCeEEEecCCCe---EEEEEcCCCCcccccccCCC
Q 046394 217 YSMVKGYQIGKVSFRPYEDVLGIGHSMGV---SGILIPGSGEPNFDSWVANP 265 (378)
Q Consensus 217 ~~~~~~~~v~~~~~sp~g~~l~~~~~~g~---~~~~~~~s~d~~i~~w~~~~ 265 (378)
+. +...+.+++|+|+|.+|++++.+.. ..++++|+.|+.+.+|+...
T Consensus 341 ~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 341 IP--VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp EE--CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred ec--CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 43 4567899999999998888776421 12345666777788887644
No 118
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.92 E-value=1.3e-22 Score=182.19 Aligned_cols=219 Identities=9% Similarity=0.061 Sum_probs=168.5
Q ss_pred eeecccceeeEEeecCCCCceEEEEcCC---CCEEEEEeCCCcEEEEeCC--CCeE-EeeccCCCe-eEEEE-----EEE
Q 046394 29 EVDILSSRNQYDIMLPELGPYTLDFTSS---GRYMAAAGCKGYPYFYNRD--GTEL-HCSKEHGEV-LKLQF-----LLA 96 (378)
Q Consensus 29 ~~d~~~~~~~~~l~~~~~~v~~~~~sp~---g~~l~~~~~dg~i~iwd~~--~~~~-~~~~~~~~~-~~l~~-----~l~ 96 (378)
.++......+..+.+|...|++++|+|+ |.+|++|+.||.|++||.. +..+ ..+.+|... .+++| +|+
T Consensus 23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred cCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE
Confidence 4556666777888999999999999999 6999999999999999954 4554 678888876 99999 899
Q ss_pred EEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEE--cCCCCEEEEEcCCCe-------------eeecCCCEEEEEEecC
Q 046394 97 SINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRV--NPFNGVVSLGHSGGT-------------MLCHQGPVSALAFHPN 161 (378)
Q Consensus 97 s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~~d~~-------------~~~h~~~v~~~~~sp~ 161 (378)
+++.|+.|++||+.+++.+. +..|...|.+++| +|++.+|++++.|+. .......+.++.+.+
T Consensus 103 s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~- 180 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY- 180 (368)
T ss_dssp EEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEET-
T ss_pred EEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecC-
Confidence 99999999999999988776 4568899999999 999999999999997 122334566666654
Q ss_pred CCEEEEEECCCeEEEEEcCCceeeeee-----cCCceEEEEec--------------CCCccccCCCCC---ceEEEeec
Q 046394 162 GHLMATSGKDCKIKIWDLRKYEVLQTL-----PGHAKTLDFSR--------------KDSGDFSGSHNY---NRYMGYSM 219 (378)
Q Consensus 162 g~~l~t~~~d~~i~iwd~~~~~~~~~~-----~~~i~~~~~sp--------------~g~~~~~~~~~~---~~~~~~~~ 219 (378)
..+++++.++.+.+||+......... .....++.+.+ +|...+|+.... ..+..+..
T Consensus 181 -~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 259 (368)
T 3mmy_A 181 -PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKC 259 (368)
T ss_dssp -TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEEC
T ss_pred -CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeee
Confidence 48899999999999999875443222 23344444433 444567766554 44455555
Q ss_pred cCCc------------ceeeeEEcCCCCeEEEecCCCeEEEEEc
Q 046394 220 VKGY------------QIGKVSFRPYEDVLGIGHSMGVSGILIP 251 (378)
Q Consensus 220 ~~~~------------~v~~~~~sp~g~~l~~~~~~g~~~~~~~ 251 (378)
|.. +|++++|+|++.+|++|+.||.+.+|..
T Consensus 260 -~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~ 302 (368)
T 3mmy_A 260 -HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDK 302 (368)
T ss_dssp -SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred -eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEEC
Confidence 443 6999999999999988888887666654
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=5e-23 Score=183.91 Aligned_cols=174 Identities=11% Similarity=0.040 Sum_probs=135.3
Q ss_pred eecCCceeeEEEec-cceeeeeecccceeeEEee-cCCCCceEEEEcC--CCCEEEEEeCCCcEEEEeC-CCCeEEeecc
Q 046394 10 LEAEGVEKTWRIKQ-EAIAREVDILSSRNQYDIM-LPELGPYTLDFTS--SGRYMAAAGCKGYPYFYNR-DGTELHCSKE 84 (378)
Q Consensus 10 l~~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~l~-~~~~~v~~~~~sp--~g~~l~~~~~dg~i~iwd~-~~~~~~~~~~ 84 (378)
+.+.+.+.++++|. ++.+.+||+.+++.+..+. .|...|.+++|+| ++++|++|+.||.|++||. ++..+..+..
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 167 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA 167 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec
Confidence 44555666666654 4566667777877666665 6778899999999 9999999999999999995 4555555544
Q ss_pred CCC--eeEEEE-----EEEEEeCCCeEEEEEcCCCcEE-EEEec-CCCCeeEEEEcCCCCEEEEEcCCCe----------
Q 046394 85 HGE--VLKLQF-----LLASINKLGQLRYQNVTMGEIV-GNFWT-GLGRTDVIRVNPFNGVVSLGHSGGT---------- 145 (378)
Q Consensus 85 ~~~--~~~l~~-----~l~s~~~d~~i~iwd~~~~~~~-~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~---------- 145 (378)
+.. +.+++| +|++|+.|+.|++||+++++.+ ..+.. |.+.|.+++|+|++.+|++++.+..
T Consensus 168 ~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~ 247 (343)
T 3lrv_A 168 KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVG 247 (343)
T ss_dssp CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTT
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCc
Confidence 433 489999 9999999999999999999887 78887 8999999999999999999996533
Q ss_pred ---ee---ecCCCEE--EEEEecCCCEEEEEEC-CCeEEEEEcCCce
Q 046394 146 ---ML---CHQGPVS--ALAFHPNGHLMATSGK-DCKIKIWDLRKYE 183 (378)
Q Consensus 146 ---~~---~h~~~v~--~~~~sp~g~~l~t~~~-d~~i~iwd~~~~~ 183 (378)
+. .|...+. +++|+|+|++|++++. |+.|+||++....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 248 TLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp CBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred ceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 11 1333343 5999999999999998 9999999996643
No 120
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.92 E-value=2.7e-23 Score=191.50 Aligned_cols=225 Identities=12% Similarity=0.099 Sum_probs=166.5
Q ss_pred EEeecCCCCceEEEEcCC-CCEEEEEeCCCcEEEEeCC-----------CCeEEeeccCCCe-eEEEE------EEEEEe
Q 046394 39 YDIMLPELGPYTLDFTSS-GRYMAAAGCKGYPYFYNRD-----------GTELHCSKEHGEV-LKLQF------LLASIN 99 (378)
Q Consensus 39 ~~l~~~~~~v~~~~~sp~-g~~l~~~~~dg~i~iwd~~-----------~~~~~~~~~~~~~-~~l~~------~l~s~~ 99 (378)
.....|.+.|++++|+|+ +.+||+++.+|.|++||.. ...+..+.+|... .+++| +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 455678899999999997 6799999999999999953 4667788889876 99999 899999
Q ss_pred CCCeEEEEEcCCCcE-------EEEEecCCCCeeEEEEcC-CCCEEEEEcCCCe-----------------eeecCCCEE
Q 046394 100 KLGQLRYQNVTMGEI-------VGNFWTGLGRTDVIRVNP-FNGVVSLGHSGGT-----------------MLCHQGPVS 154 (378)
Q Consensus 100 ~d~~i~iwd~~~~~~-------~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~-----------------~~~h~~~v~ 154 (378)
.||.|++||+.++.. ...+..|...|.+++|+| ++.+|++++.++. +..|...|+
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 999999999987321 456668889999999999 6789999998887 457889999
Q ss_pred EEEEecCCC-EEEEEECCCeEEEEEcCC-ceeeeee---cCCceEEEEecCCCccccCCCCCceEEEeeccCCcce----
Q 046394 155 ALAFHPNGH-LMATSGKDCKIKIWDLRK-YEVLQTL---PGHAKTLDFSRKDSGDFSGSHNYNRYMGYSMVKGYQI---- 225 (378)
Q Consensus 155 ~~~~sp~g~-~l~t~~~d~~i~iwd~~~-~~~~~~~---~~~i~~~~~sp~g~~~~~~~~~~~~~~~~~~~~~~~v---- 225 (378)
+++|+|++. +|++++.||.|++||+++ ..++..+ ...+.+++|+|++...+........+..|........
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 361 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 361 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHH
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcc
Confidence 999999887 689999999999999998 5566666 4789999999998753333322233444433110000
Q ss_pred ------eeeEEcC---CCCeEE-EecCCCeEEEEEcCCCCcccccccCC
Q 046394 226 ------GKVSFRP---YEDVLG-IGHSMGVSGILIPGSGEPNFDSWVAN 264 (378)
Q Consensus 226 ------~~~~~sp---~g~~l~-~~~~~g~~~~~~~~s~d~~i~~w~~~ 264 (378)
..+.+.. .+.... .-+.++. .++++++.|+.|++|++.
T Consensus 362 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 362 DAEDGPPELLFIHGGHTAKISDFSWNPNEP-WIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp HHHHCCTTEEEECCCCSSCEEEEEECSSST-TEEEEEETTSEEEEEEEC
T ss_pred ccccCCcceEEEcCCCCCCceEEEECCCCC-CEEEEEECCCCEEEeEcc
Confidence 0122211 112222 2223331 267788899999999864
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.91 E-value=9.2e-22 Score=178.67 Aligned_cols=243 Identities=10% Similarity=0.051 Sum_probs=181.1
Q ss_pred EEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEe-CCCcEEEEeC-CCCeEEeeccCCCeeEEEE---
Q 046394 19 WRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAG-CKGYPYFYNR-DGTELHCSKEHGEVLKLQF--- 93 (378)
Q Consensus 19 ~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~-~dg~i~iwd~-~~~~~~~~~~~~~~~~l~~--- 93 (378)
+....++.|++||+.+++....+..+. .+.+++|+|+|++|++++ .++.|++||. ++..+..+..+..+.+++|
T Consensus 48 ~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~d 126 (391)
T 1l0q_A 48 VANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPD 126 (391)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTT
T ss_pred EECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCC
Confidence 344468999999999999998888774 899999999999886555 5799999995 4566677777777788999
Q ss_pred ---EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEE-EEEcCCCe-------------eeecCCCEEEE
Q 046394 94 ---LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVV-SLGHSGGT-------------MLCHQGPVSAL 156 (378)
Q Consensus 94 ---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~-------------~~~h~~~v~~~ 156 (378)
++++++.|+.|++||+.+++.+..+..+ ..+.+++|+|++..+ ++++.++. ...+...+.++
T Consensus 127 g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 205 (391)
T 1l0q_A 127 GKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGI 205 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEE
T ss_pred CCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccce
Confidence 4478888999999999999998888765 567999999999877 56666666 33456788999
Q ss_pred EEecCCCEEEEEE---CCCeEEEEEcCCceeeeee--cCCceEEEEecCCCc-----------cccCCCCCceEEEeecc
Q 046394 157 AFHPNGHLMATSG---KDCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSG-----------DFSGSHNYNRYMGYSMV 220 (378)
Q Consensus 157 ~~sp~g~~l~t~~---~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~-----------~~~~~~~~~~~~~~~~~ 220 (378)
+|+|+|++|++++ .++.|++||+.+++.+..+ +..+.+++|+|+|.+ .+|+..+...+..+..
T Consensus 206 ~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~- 284 (391)
T 1l0q_A 206 AVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAV- 284 (391)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-
T ss_pred EECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEEC-
Confidence 9999999998888 6899999999999988888 567889999999975 3445555555555544
Q ss_pred CCcce---eeeEEcCCCCeEEEec-----CCCeE-----EEEEcCCCCcccccccCC
Q 046394 221 KGYQI---GKVSFRPYEDVLGIGH-----SMGVS-----GILIPGSGEPNFDSWVAN 264 (378)
Q Consensus 221 ~~~~v---~~~~~sp~g~~l~~~~-----~~g~~-----~~~~~~s~d~~i~~w~~~ 264 (378)
+..+. ..+.+.|++..+.++. ..+.. ..+...+.|...++|+..
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 341 (391)
T 1l0q_A 285 GKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFG 341 (391)
T ss_dssp SSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECS
T ss_pred CcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECC
Confidence 33322 1245566554332111 11111 234566677888889863
No 122
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.91 E-value=4.8e-23 Score=202.73 Aligned_cols=189 Identities=12% Similarity=0.114 Sum_probs=161.3
Q ss_pred ceeeEEEeccceeeeeecc--cceeeEEeecCCCCceEEEEcCC--CCEEEEEeCCCcEEEEeCCCC---eEEeeccCCC
Q 046394 15 VEKTWRIKQEAIAREVDIL--SSRNQYDIMLPELGPYTLDFTSS--GRYMAAAGCKGYPYFYNRDGT---ELHCSKEHGE 87 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~--~~~~~~~l~~~~~~v~~~~~sp~--g~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~ 87 (378)
....+....++.|++||+. ++.....+.+|...|++++|+|+ +++|++|+.||.|++||..+. .+..+.+|..
T Consensus 21 g~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~ 100 (753)
T 3jro_A 21 GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSA 100 (753)
T ss_dssp SCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS
T ss_pred CCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCC
Confidence 3456667789999999998 66778889999999999999998 999999999999999995443 5677788877
Q ss_pred e-eEEEE-------EEEEEeCCCeEEEEEcCCCc--EEEEEecCCCCeeEEEEcC-------------CCCEEEEEcCCC
Q 046394 88 V-LKLQF-------LLASINKLGQLRYQNVTMGE--IVGNFWTGLGRTDVIRVNP-------------FNGVVSLGHSGG 144 (378)
Q Consensus 88 ~-~~l~~-------~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~s~-------------~~~~l~~~~~d~ 144 (378)
. .+++| .+++|+.||.|++||+.++. ....+..|...|.+++|+| ++.+|++|+.||
T Consensus 101 ~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg 180 (753)
T 3jro_A 101 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 180 (753)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTS
T ss_pred CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCC
Confidence 6 99999 79999999999999998873 4456678899999999999 589999999998
Q ss_pred e------------------eeecCCCEEEEEEecC---CCEEEEEECCCeEEEEEcCCcee-----eeee---cCCceEE
Q 046394 145 T------------------MLCHQGPVSALAFHPN---GHLMATSGKDCKIKIWDLRKYEV-----LQTL---PGHAKTL 195 (378)
Q Consensus 145 ~------------------~~~h~~~v~~~~~sp~---g~~l~t~~~d~~i~iwd~~~~~~-----~~~~---~~~i~~~ 195 (378)
. +.+|.+.|++++|+|+ +.+|++++.||.|++||++++.. +... ...++++
T Consensus 181 ~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l 260 (753)
T 3jro_A 181 LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRA 260 (753)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCE
T ss_pred eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEE
Confidence 7 4578999999999999 89999999999999999998642 2222 4678999
Q ss_pred EEecCCCc
Q 046394 196 DFSRKDSG 203 (378)
Q Consensus 196 ~~sp~g~~ 203 (378)
+|+|+|.+
T Consensus 261 ~~spdg~~ 268 (753)
T 3jro_A 261 SWSLSGNV 268 (753)
T ss_dssp EECTTTCC
T ss_pred EEcCCCCE
Confidence 99998875
No 123
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.8e-22 Score=186.02 Aligned_cols=205 Identities=8% Similarity=-0.002 Sum_probs=161.3
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCC-----CceEEEEcCCCCEEEEEeCCCcEEEEeCCCC--------eEEe
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPEL-----GPYTLDFTSSGRYMAAAGCKGYPYFYNRDGT--------ELHC 81 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~-----~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~--------~~~~ 81 (378)
.......+.++.+++||... .+..+. |.. .|.+++|||||++||+|+.||+|+|||..+. .+.+
T Consensus 97 G~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~t 173 (588)
T 2j04_A 97 DDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESS 173 (588)
T ss_dssp SSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEE
T ss_pred CCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeee
Confidence 33455677889999999655 555566 655 5999999999999999999999999996554 2566
Q ss_pred e----ccCCCe-eEEEE---EEEEEeCCCeEEEEEcCCCcE---EEEEe-cCCCCeeEEEEcCCCCEEEEEcCCCe----
Q 046394 82 S----KEHGEV-LKLQF---LLASINKLGQLRYQNVTMGEI---VGNFW-TGLGRTDVIRVNPFNGVVSLGHSGGT---- 145 (378)
Q Consensus 82 ~----~~~~~~-~~l~~---~l~s~~~d~~i~iwd~~~~~~---~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~---- 145 (378)
+ .+|... .+++| -+++++.|++|++||+..+.. ..++. .|...|.+++|+ ++.||+++. +.
T Consensus 174 i~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~-~tIkLW 250 (588)
T 2j04_A 174 IRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCP-GYVHKI 250 (588)
T ss_dssp EECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECS-SEEEEE
T ss_pred eecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeC-CeEEEE
Confidence 6 455554 99999 888889999999999988773 45663 677899999999 689999885 55
Q ss_pred ----------eeecCCCEEEEEE--ecCCCEEEEEECCCeEEEEEcCCceeeeeecCCceEEEEecCCCc--------cc
Q 046394 146 ----------MLCHQGPVSALAF--HPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKDSG--------DF 205 (378)
Q Consensus 146 ----------~~~h~~~v~~~~~--sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~~~~i~~~~~sp~g~~--------~~ 205 (378)
..+|...|.+++| +|++..+++++.||+ ++|.... ++++||+.. .+
T Consensus 251 d~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~-------------~~~spd~~l~a~~d~~v~l 316 (588)
T 2j04_A 251 DLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDE-------------LHVTADNIIAPYLEKKFKK 316 (588)
T ss_dssp ETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSS-------------EEEECCCSSHHHHHHHHHH
T ss_pred ECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeecc-------------EEECCCceEEEEcCCEEEE
Confidence 2389999999999 999999999999999 9999872 568888874 66
Q ss_pred cCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecC
Q 046394 206 SGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHS 242 (378)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 242 (378)
|+..... +..+. +...|++++|||||..+|+++.
T Consensus 317 W~~~g~~-l~~~~--~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 317 WSTIWNE-FNNYE--TTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp TTTTTTS-SSSSC--CEEEEEEEEECTTSSEEEEEEE
T ss_pred EECCCCc-eeeec--cceEEEEEEECCCCCEEEEEEe
Confidence 7653333 22222 2456999999999999998764
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.89 E-value=1.7e-21 Score=178.47 Aligned_cols=215 Identities=10% Similarity=-0.015 Sum_probs=164.7
Q ss_pred eeeeeec--ccceee--EEeecCCCCceEEEEcC--------------CCCEEEEEeCC------CcEEEEeCCCCeEEe
Q 046394 26 IAREVDI--LSSRNQ--YDIMLPELGPYTLDFTS--------------SGRYMAAAGCK------GYPYFYNRDGTELHC 81 (378)
Q Consensus 26 ~i~~~d~--~~~~~~--~~l~~~~~~v~~~~~sp--------------~g~~l~~~~~d------g~i~iwd~~~~~~~~ 81 (378)
.+++||+ .+++.+ ..+.+|...+..+++++ .+..++.++.+ +.|++||.++.....
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~ 173 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFV 173 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEE
T ss_pred EEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEE
Confidence 8999999 999877 45888888888887775 15566666554 799999988888888
Q ss_pred eccCCCe-eEEEE-----EEEEEeCCC---eEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEE-EEcCCCe------
Q 046394 82 SKEHGEV-LKLQF-----LLASINKLG---QLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVS-LGHSGGT------ 145 (378)
Q Consensus 82 ~~~~~~~-~~l~~-----~l~s~~~d~---~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~d~~------ 145 (378)
+..|... .+++| .|++++.++ .|++||+.+++.. .+..+...+.+++|+|||+.|+ +++.++.
T Consensus 174 l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~ 252 (415)
T 2hqs_A 174 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVM 252 (415)
T ss_dssp EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred EeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEE
Confidence 8888765 99999 888888775 9999999998875 4566778899999999999777 5655553
Q ss_pred ---------eeecCCCEEEEEEecCCCEEEEEEC-CC--eEEEEEcCCceeeeee--cCCceEEEEecCCCcccc-----
Q 046394 146 ---------MLCHQGPVSALAFHPNGHLMATSGK-DC--KIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSGDFS----- 206 (378)
Q Consensus 146 ---------~~~h~~~v~~~~~sp~g~~l~t~~~-d~--~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~~~~----- 206 (378)
+..|...+.+++|+|+|++|++++. ++ .|.+||+.+++..... ...+.+++|||||.+.++
T Consensus 253 d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~ 332 (415)
T 2hqs_A 253 DLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNG 332 (415)
T ss_dssp ETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECS
T ss_pred ECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcC
Confidence 5567788999999999999998886 44 6888899887654322 356789999999986433
Q ss_pred --------CCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCC
Q 046394 207 --------GSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMG 244 (378)
Q Consensus 207 --------~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g 244 (378)
+..+.... .+.. + ..+.+++|+|+|++|++++.++
T Consensus 333 g~~~i~~~d~~~~~~~-~l~~-~-~~~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 333 GQQHIAKQDLATGGVQ-VLSS-T-FLDETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp SCEEEEEEETTTCCEE-ECCC-S-SSCEEEEECTTSSEEEEEEEET
T ss_pred CceEEEEEECCCCCEE-EecC-C-CCcCCeEEcCCCCEEEEEEcCC
Confidence 33333322 2222 3 2689999999999888877654
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.89 E-value=1.2e-20 Score=172.88 Aligned_cols=207 Identities=14% Similarity=0.065 Sum_probs=158.9
Q ss_pred ceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCC---cEEEEeCCCCeEEeeccCCCe-eEEEE-----EE
Q 046394 25 AIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKG---YPYFYNRDGTELHCSKEHGEV-LKLQF-----LL 95 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~-~~l~~-----~l 95 (378)
..|++||+. +.....+..|...+.+++|||||++|++++.++ .|++||..+.....+..|.+. .+++| .|
T Consensus 159 ~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~l 237 (415)
T 2hqs_A 159 YELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKL 237 (415)
T ss_dssp EEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEE
T ss_pred ceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEE
Confidence 799999997 455678888989999999999999999999875 999999655455566666655 88999 45
Q ss_pred E-EEeCCCe--EEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcC-CCe---------------eeecCCCEEEE
Q 046394 96 A-SINKLGQ--LRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHS-GGT---------------MLCHQGPVSAL 156 (378)
Q Consensus 96 ~-s~~~d~~--i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~---------------~~~h~~~v~~~ 156 (378)
+ +++.++. |++||+.+++. ..+..+...+.+++|+|+|+.|++++. ++. +..|...+.++
T Consensus 238 a~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~ 316 (415)
T 2hqs_A 238 AFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDA 316 (415)
T ss_dssp EEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEE
T ss_pred EEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCe
Confidence 5 6666554 99999988876 466677788999999999998888775 342 34466778899
Q ss_pred EEecCCCEEEEEECC---CeEEEEEcCCceeeeee-cCCceEEEEecCCCccccCCCC------------CceEEEeecc
Q 046394 157 AFHPNGHLMATSGKD---CKIKIWDLRKYEVLQTL-PGHAKTLDFSRKDSGDFSGSHN------------YNRYMGYSMV 220 (378)
Q Consensus 157 ~~sp~g~~l~t~~~d---~~i~iwd~~~~~~~~~~-~~~i~~~~~sp~g~~~~~~~~~------------~~~~~~~~~~ 220 (378)
+|+|+|++|++++.+ ..|.+||+.+++..... +..+.+++|+|||.+.++.... ......+..
T Consensus 317 ~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~- 395 (415)
T 2hqs_A 317 DVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPA- 395 (415)
T ss_dssp EECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCC-
T ss_pred EECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeC-
Confidence 999999999988864 58999999988774322 4578999999999864332211 222333444
Q ss_pred CCcceeeeEEcCCC
Q 046394 221 KGYQIGKVSFRPYE 234 (378)
Q Consensus 221 ~~~~v~~~~~sp~g 234 (378)
+...|.+++|+|.-
T Consensus 396 ~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 396 TDGQVKFPAWSPYL 409 (415)
T ss_dssp SSSEEEEEEECCCC
T ss_pred CCCCCcCCcccccc
Confidence 66778999999875
No 126
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=1e-19 Score=161.33 Aligned_cols=230 Identities=10% Similarity=-0.014 Sum_probs=160.9
Q ss_pred eEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeC-CCcEEEEeC-CCCe-EEeeccCCCeeE-EEE
Q 046394 18 TWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGC-KGYPYFYNR-DGTE-LHCSKEHGEVLK-LQF 93 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~-dg~i~iwd~-~~~~-~~~~~~~~~~~~-l~~ 93 (378)
.+.-..++.|.+||+.+++....+..+...+ +++|+|+|++|++++. ++.|.+||. ++.. ...+..+..+.. ++|
T Consensus 13 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (331)
T 3u4y_A 13 IVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDI 91 (331)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEE
T ss_pred EEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEE
Confidence 4445568899999999999888888776667 9999999997777666 889999995 4554 666777767755 888
Q ss_pred -----EEEEEeCC-C--eEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEE-cCCCe-ee----------------
Q 046394 94 -----LLASINKL-G--QLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLG-HSGGT-ML---------------- 147 (378)
Q Consensus 94 -----~l~s~~~d-~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~-~~---------------- 147 (378)
+++++..+ + .|.+||+.+++.+..+..+ ..+.+++|+|+|++++++ ..++. +.
T Consensus 92 s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~ 170 (331)
T 3u4y_A 92 TPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE 170 (331)
T ss_dssp CTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred CCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc
Confidence 56654444 3 9999999999988887654 557899999999855554 33232 11
Q ss_pred --ecCCCEEEEEEecCCCEEEEE-ECCCeEEEEEcCCcee---eeee--cCCceEEEEecCCCcc-----------ccCC
Q 046394 148 --CHQGPVSALAFHPNGHLMATS-GKDCKIKIWDLRKYEV---LQTL--PGHAKTLDFSRKDSGD-----------FSGS 208 (378)
Q Consensus 148 --~h~~~v~~~~~sp~g~~l~t~-~~d~~i~iwd~~~~~~---~~~~--~~~i~~~~~sp~g~~~-----------~~~~ 208 (378)
.....+.+++|+|+|++++.+ ..++.|.+||+.+++. +..+ ...+..++|+|||.+. +|+.
T Consensus 171 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 171 FISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp EECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred cccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 123457899999999966554 4688999999999888 7777 5678899999999952 3333
Q ss_pred CCCce--EEEeecc---CCcc---eeeeEEcCCCCeEEEecC-CCeEEEE
Q 046394 209 HNYNR--YMGYSMV---KGYQ---IGKVSFRPYEDVLGIGHS-MGVSGIL 249 (378)
Q Consensus 209 ~~~~~--~~~~~~~---~~~~---v~~~~~sp~g~~l~~~~~-~g~~~~~ 249 (378)
.+... +..+... +..+ +..++|+|||++|++++. ++.+.+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 300 (331)
T 3u4y_A 251 LSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVF 300 (331)
T ss_dssp TTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEE
Confidence 33333 1111110 1112 234799999987654433 3344444
No 127
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.87 E-value=4.2e-20 Score=165.71 Aligned_cols=163 Identities=12% Similarity=0.121 Sum_probs=126.5
Q ss_pred eEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEE-EEEeCCCcEEEEe-CCCCeEEeeccCCCeeEEEE--
Q 046394 18 TWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYM-AAAGCKGYPYFYN-RDGTELHCSKEHGEVLKLQF-- 93 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l-~~~~~dg~i~iwd-~~~~~~~~~~~~~~~~~l~~-- 93 (378)
.+....+..+++||+.++........+ ++..++++++++.+ ++|+.|+.|++|| .++..+..+..+..+.++.|
T Consensus 33 ~la~g~~~~~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~ 110 (355)
T 3vu4_A 33 CLILSTLKSFEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSR 110 (355)
T ss_dssp EEEEECSSEEEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECS
T ss_pred EEEEEcCCEEEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcC
Confidence 444444555789999988877665543 58888999988877 4677789999999 56666666654443454444
Q ss_pred --------------------------------------EEEE--EeCCCeEEEEEcCCCc---------------E-EEE
Q 046394 94 --------------------------------------LLAS--INKLGQLRYQNVTMGE---------------I-VGN 117 (378)
Q Consensus 94 --------------------------------------~l~s--~~~d~~i~iwd~~~~~---------------~-~~~ 117 (378)
+++. ++.||.|++||+.++. + +..
T Consensus 111 ~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~ 190 (355)
T 3vu4_A 111 EFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVL 190 (355)
T ss_dssp SEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEE
T ss_pred CEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEE
Confidence 1222 4678889999988765 2 677
Q ss_pred EecCCCCeeEEEEcCCCCEEEEEcCCCe---------------ee-e-cCCCEEEEEEecCCCEEEEEECCCeEEEEEcC
Q 046394 118 FWTGLGRTDVIRVNPFNGVVSLGHSGGT---------------ML-C-HQGPVSALAFHPNGHLMATSGKDCKIKIWDLR 180 (378)
Q Consensus 118 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~---------------~~-~-h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~ 180 (378)
+..|.+.|.+++|+|++.+|++++.|+. +. + |...|.+++|+|+|++|++++.|++|+|||+.
T Consensus 191 ~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 191 IKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred EEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 8899999999999999999999999983 44 4 99999999999999999999999999999997
Q ss_pred Cc
Q 046394 181 KY 182 (378)
Q Consensus 181 ~~ 182 (378)
.+
T Consensus 271 ~~ 272 (355)
T 3vu4_A 271 ND 272 (355)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 128
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.86 E-value=1.7e-20 Score=162.66 Aligned_cols=154 Identities=14% Similarity=0.054 Sum_probs=116.9
Q ss_pred cceeeeeec-ccceeeEEeecCCCCceEEEEcC---CCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCC----eeEEEE-
Q 046394 24 EAIAREVDI-LSSRNQYDIMLPELGPYTLDFTS---SGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGE----VLKLQF- 93 (378)
Q Consensus 24 ~~~i~~~d~-~~~~~~~~l~~~~~~v~~~~~sp---~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~----~~~l~~- 93 (378)
++.|++|++ .+++.+..+.+|...+..++|+| ++.+|++|+.|++|+||| .+|+.++++.+|.. +.+++|
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafS 235 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYS 235 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEE
T ss_pred CCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEEC
Confidence 888999999 45888888889999999999999 779999999999999999 56888999986542 245566
Q ss_pred ----E------------EEEEeCCCeEEEEEcCCCcEEEEEe-----cCCCCeeEEEEcCCCCEEEEEcCCCe-------
Q 046394 94 ----L------------LASINKLGQLRYQNVTMGEIVGNFW-----TGLGRTDVIRVNPFNGVVSLGHSGGT------- 145 (378)
Q Consensus 94 ----~------------l~s~~~d~~i~iwd~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~d~~------- 145 (378)
+ +++|+.|++|++||..+++.+..+. +|...+.+..+ ++.++++++.|+.
T Consensus 236 pdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~ 313 (356)
T 2w18_A 236 EMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLL 313 (356)
T ss_dssp ETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETT
T ss_pred CCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECC
Confidence 2 4778899999999999999876652 34444433333 3778888888887
Q ss_pred -------eeecCCCEE-EEEEecCCCEEEEEECCCeEEEEEc
Q 046394 146 -------MLCHQGPVS-ALAFHPNGHLMATSGKDCKIKIWDL 179 (378)
Q Consensus 146 -------~~~h~~~v~-~~~~sp~g~~l~t~~~d~~i~iwd~ 179 (378)
+.+|...+. +++|+|+|++|++|+.|++|+|||+
T Consensus 314 tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 314 LGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 556766555 5889999999999999999999985
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=7.9e-20 Score=158.69 Aligned_cols=216 Identities=11% Similarity=0.077 Sum_probs=154.9
Q ss_pred ccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC--CeEEeeccCC-C-eeEEEE-----
Q 046394 23 QEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG--TELHCSKEHG-E-VLKLQF----- 93 (378)
Q Consensus 23 ~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~--~~~~~~~~~~-~-~~~l~~----- 93 (378)
.++.|.+||+.+++.. .+..|...|.+++|+|+|++|++++ ++.|++||..+ ........+. . +.+++|
T Consensus 20 ~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 97 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA 97 (297)
T ss_dssp CCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS
T ss_pred cceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCC
Confidence 4688999999988765 5556788999999999999999986 78999999654 4555555553 3 378888
Q ss_pred EEEEEe--CCC--eEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEE-EEcCCCe---------------eeecCCCE
Q 046394 94 LLASIN--KLG--QLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVS-LGHSGGT---------------MLCHQGPV 153 (378)
Q Consensus 94 ~l~s~~--~d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~d~~---------------~~~h~~~v 153 (378)
.+++++ .++ .|.+|++.++. ...+..+ ..+..++|+|+++.|+ +++.++. +..|...+
T Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 175 (297)
T 2ojh_A 98 LYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRN 175 (297)
T ss_dssp EEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCE
T ss_pred EEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCcc
Confidence 777777 334 44555555554 3344333 4588999999999777 5666664 44567789
Q ss_pred EEEEEecCCCEEEEEE-CCCeEEEEEcC-Cceeeeee---cCCceEEEEecCCCcccc---------------------C
Q 046394 154 SALAFHPNGHLMATSG-KDCKIKIWDLR-KYEVLQTL---PGHAKTLDFSRKDSGDFS---------------------G 207 (378)
Q Consensus 154 ~~~~~sp~g~~l~t~~-~d~~i~iwd~~-~~~~~~~~---~~~i~~~~~sp~g~~~~~---------------------~ 207 (378)
.+++|+|+|++|+.++ .++.+.||++. .+..+..+ ...+.+++|+|+|.+.++ +
T Consensus 176 ~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d 255 (297)
T 2ojh_A 176 DGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMD 255 (297)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEE
T ss_pred ccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEe
Confidence 9999999999888766 58999999986 45555555 356788999999985332 2
Q ss_pred CCCCce--EEEeeccCCcceeeeEEcCCCCeEEEecCC
Q 046394 208 SHNYNR--YMGYSMVKGYQIGKVSFRPYEDVLGIGHSM 243 (378)
Q Consensus 208 ~~~~~~--~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~ 243 (378)
...... +..... |...+.++.|+|+|+.|++++.+
T Consensus 256 ~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 256 MDGGNVETLFDLFG-GQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp TTSCSCEEEEEEEE-STTTSCSCCBCTTSSEEEEEEEC
T ss_pred cCCCCceeeeccCC-CCcccccceECCCCCEEEEEEec
Confidence 222222 222224 56678999999999988877654
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.86 E-value=8.5e-19 Score=165.60 Aligned_cols=222 Identities=12% Similarity=0.003 Sum_probs=167.3
Q ss_pred eEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeC---CCCeEEeeccCCCeeEEEE-
Q 046394 18 TWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNR---DGTELHCSKEHGEVLKLQF- 93 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~---~~~~~~~~~~~~~~~~l~~- 93 (378)
.+....++.|.+||..+++.+..+..+.. +.+++|+|||++|++++.|+.|.+||. ++..+..+..+..+..++|
T Consensus 152 ~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~s 230 (543)
T 1nir_A 152 SVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESS 230 (543)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEEC
T ss_pred EEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeC
Confidence 44445688999999999999999985433 899999999999999999999999997 5566777776555677766
Q ss_pred --------EEEEEe-CCCeEEEEEcCCCcEEEEEecC-----------CCCeeEEEEcCCCCEE-EEEcCCCe-------
Q 046394 94 --------LLASIN-KLGQLRYQNVTMGEIVGNFWTG-----------LGRTDVIRVNPFNGVV-SLGHSGGT------- 145 (378)
Q Consensus 94 --------~l~s~~-~d~~i~iwd~~~~~~~~~~~~~-----------~~~v~~~~~s~~~~~l-~~~~~d~~------- 145 (378)
++++++ .+++|.+||..+++++..+..+ ...+..+.++|++..+ ++...++.
T Consensus 231 p~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~ 310 (543)
T 1nir_A 231 KFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYK 310 (543)
T ss_dssp CSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECT
T ss_pred CCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEec
Confidence 466665 5899999999999998888652 2368899999988654 44445554
Q ss_pred --------eeecCCCEEEEEEecCCCEEEEEE-CCCeEEEEEcCCceeeeeec-----CCceEEE-EecC-C--------
Q 046394 146 --------MLCHQGPVSALAFHPNGHLMATSG-KDCKIKIWDLRKYEVLQTLP-----GHAKTLD-FSRK-D-------- 201 (378)
Q Consensus 146 --------~~~h~~~v~~~~~sp~g~~l~t~~-~d~~i~iwd~~~~~~~~~~~-----~~i~~~~-~sp~-g-------- 201 (378)
...+...+.+++|+|+|++|++++ .+++|.+||+.+++++.++. .+...+. ++|+ |
T Consensus 311 ~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~ 390 (543)
T 1nir_A 311 DIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHL 390 (543)
T ss_dssp TSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBS
T ss_pred CCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccC
Confidence 112445567899999999876555 68899999999999988771 1111222 3555 2
Q ss_pred ---CccccCCCC-------CceEEEeeccCCcceeeeEEcCCCCeEEEec
Q 046394 202 ---SGDFSGSHN-------YNRYMGYSMVKGYQIGKVSFRPYEDVLGIGH 241 (378)
Q Consensus 202 ---~~~~~~~~~-------~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~ 241 (378)
...+|+..+ ...+..+.+ ++..+..+.|+|+|++|.+++
T Consensus 391 ~d~~V~v~d~~~~~~~~~~~~~v~~l~~-~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 391 GDGSISLIGTDPKNHPQYAWKKVAELQG-QGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp SSSEEEEEECCTTTCTTTBTSEEEEEEC-SCSCCCCEECCTTCCEEEECC
T ss_pred CCceEEEEEeCCCCCchhcCeEEEEEEc-CCCCceEEEcCCCCCcEEEec
Confidence 235666655 677888887 777788999999999887776
No 131
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.84 E-value=2.7e-20 Score=169.29 Aligned_cols=191 Identities=7% Similarity=-0.037 Sum_probs=129.2
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCC-CEEEEEeCCCcEEEEeCC-CCeEEe------------
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSG-RYMAAAGCKGYPYFYNRD-GTELHC------------ 81 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g-~~l~~~~~dg~i~iwd~~-~~~~~~------------ 81 (378)
...+..+.|+++++||+.++..+..+..|...|.+++|+|++ .+|++|+.||.|++||.. +.....
T Consensus 157 ~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~ 236 (393)
T 4gq1_A 157 QVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWL 236 (393)
T ss_dssp EEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCS
T ss_pred CEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceE
Confidence 345667789999999999999888899999999999999987 489999999999999943 322111
Q ss_pred -------------eccCCCe-eEEEE------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEc
Q 046394 82 -------------SKEHGEV-LKLQF------LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGH 141 (378)
Q Consensus 82 -------------~~~~~~~-~~l~~------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 141 (378)
..+|... .++.| .+++++.|+++++||+.++.....+..+...+..+.+.|+...+.
T Consensus 237 ~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--- 313 (393)
T 4gq1_A 237 LTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGIS--- 313 (393)
T ss_dssp EEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEEC---
T ss_pred EecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccc---
Confidence 1234443 67777 899999999999999999888888888888888888888865432
Q ss_pred CCCeeeecCCCEEEEEEec--CCCEEEEEECCCeEEEEEcCCceeeeee---cCCceEEEEecCCCccccCCCCCceEEE
Q 046394 142 SGGTMLCHQGPVSALAFHP--NGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSGDFSGSHNYNRYMG 216 (378)
Q Consensus 142 ~d~~~~~h~~~v~~~~~sp--~g~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g~~~~~~~~~~~~~~~ 216 (378)
.+...+ ...|+| ++.++++++.||+|+|||+.++.++..+ +.+|.+++|||||++.+.....+..+..
T Consensus 314 ------~~~~~~-~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvr 386 (393)
T 4gq1_A 314 ------LFPSLL-GACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTR 386 (393)
T ss_dssp ------SSCCSS-CCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEE
T ss_pred ------ccCcce-eEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 222233 334444 4456777889999999999998887666 5789999999999987666554444333
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.84 E-value=5.8e-18 Score=151.17 Aligned_cols=218 Identities=6% Similarity=-0.002 Sum_probs=165.5
Q ss_pred cceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEE-eCCCcEEEEeC-CCCeEEeeccCCC----------eeEE
Q 046394 24 EAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAA-GCKGYPYFYNR-DGTELHCSKEHGE----------VLKL 91 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~-~~dg~i~iwd~-~~~~~~~~~~~~~----------~~~l 91 (378)
++.|.+||..+++....+... ..+.+++|+|+|++++++ ..++.|.+||. ++..+..+..+.. +.++
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPREL 146 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEE
T ss_pred CccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceE
Confidence 568999999999988888764 558899999999966655 44789999995 5666666655431 4667
Q ss_pred EE-----EEEEE--eCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------ee---
Q 046394 92 QF-----LLASI--NKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------ML--- 147 (378)
Q Consensus 92 ~~-----~l~s~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~--- 147 (378)
.| .++++ +.++.|.+||+.+++.+..+..+...+.+++|+|+++.+++++.++. +.
T Consensus 147 ~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~ 226 (353)
T 3vgz_A 147 VADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLD 226 (353)
T ss_dssp EEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCC
T ss_pred EECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCC
Confidence 77 34443 35889999999999998888756666889999999999999888776 11
Q ss_pred -ecCCCEEEEEEecCCCEEEEEEC-CCeEEEEEcCCceeeeee-cCCceEEEEecCCCc-----------cccCCCCCce
Q 046394 148 -CHQGPVSALAFHPNGHLMATSGK-DCKIKIWDLRKYEVLQTL-PGHAKTLDFSRKDSG-----------DFSGSHNYNR 213 (378)
Q Consensus 148 -~h~~~v~~~~~sp~g~~l~t~~~-d~~i~iwd~~~~~~~~~~-~~~i~~~~~sp~g~~-----------~~~~~~~~~~ 213 (378)
++...+.+++|+|+|+++++++. ++.|.+||+.+++.+..+ ......++|+|+|.+ .+|+..+...
T Consensus 227 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 227 DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeE
Confidence 24556788999999998766664 589999999999988887 333467999999984 3445555555
Q ss_pred EEEeeccCCcceeeeEEcCCCCeEEEecCCC
Q 046394 214 YMGYSMVKGYQIGKVSFRPYEDVLGIGHSMG 244 (378)
Q Consensus 214 ~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g 244 (378)
+..+.. ...+.+++|+|+|++|+++..++
T Consensus 307 ~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 307 VKTFDT--PTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEEEEC--CSEEEEEEECTTSCEEEEEEECC
T ss_pred EEEEec--CCCCCeEEEcCCCCEEEEEEccc
Confidence 555543 34688999999998776665553
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.82 E-value=1.6e-17 Score=147.57 Aligned_cols=225 Identities=11% Similarity=0.078 Sum_probs=149.5
Q ss_pred eccceeeeeecc-cce-eeEEeecCCCCceEEEEcCCCCEEEEEeCC-CcEEEEeCC---CC--eEEeeccCCCeeEEEE
Q 046394 22 KQEAIAREVDIL-SSR-NQYDIMLPELGPYTLDFTSSGRYMAAAGCK-GYPYFYNRD---GT--ELHCSKEHGEVLKLQF 93 (378)
Q Consensus 22 ~~~~~i~~~d~~-~~~-~~~~l~~~~~~v~~~~~sp~g~~l~~~~~d-g~i~iwd~~---~~--~~~~~~~~~~~~~l~~ 93 (378)
..++.|++||+. ++. .......|...+.+++|+|+|++|++++.+ +.|.+|+++ +. .+..+..+..+..++|
T Consensus 12 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (343)
T 1ri6_A 12 PESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHIST 91 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEE
T ss_pred CCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEE
Confidence 457899999985 332 222233466789999999999999988886 899999954 33 2334554555688888
Q ss_pred -----EE-EEEeCCCeEEEEEcC---CCcEEEEEecCCCCeeEEEEcCCCCEEEEEc-CCCe-----------e------
Q 046394 94 -----LL-ASINKLGQLRYQNVT---MGEIVGNFWTGLGRTDVIRVNPFNGVVSLGH-SGGT-----------M------ 146 (378)
Q Consensus 94 -----~l-~s~~~d~~i~iwd~~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~-----------~------ 146 (378)
.+ +++..++.|.+||+. +...+..+.. ...+.+++|+|+++++++++ .++. +
T Consensus 92 s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 170 (343)
T 1ri6_A 92 DHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPA 170 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccc
Confidence 45 444558999999994 3344555443 35688999999999887776 5555 1
Q ss_pred e--e-cCCCEEEEEEecCCCEEEEEE-CCCeEEEEEcCC--cee--eeee---c------CCceEEEEecCCCccc----
Q 046394 147 L--C-HQGPVSALAFHPNGHLMATSG-KDCKIKIWDLRK--YEV--LQTL---P------GHAKTLDFSRKDSGDF---- 205 (378)
Q Consensus 147 ~--~-h~~~v~~~~~sp~g~~l~t~~-~d~~i~iwd~~~--~~~--~~~~---~------~~i~~~~~sp~g~~~~---- 205 (378)
. . ....+.+++|+|+|+++++++ .++.|.+||+.. +.. ...+ . ..+..++|+|+|.+.+
T Consensus 171 ~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~ 250 (343)
T 1ri6_A 171 EVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR 250 (343)
T ss_dssp EEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET
T ss_pred ccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEec
Confidence 0 0 223677899999999776555 789999999953 433 2222 1 1345799999997532
Q ss_pred -------cCCC----CCceEEEeeccCCcceeeeEEcCCCCeEEEec-CCCeEEEE
Q 046394 206 -------SGSH----NYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGH-SMGVSGIL 249 (378)
Q Consensus 206 -------~~~~----~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~-~~g~~~~~ 249 (378)
|+.. ....+..... +. .+.+++|+|+|++|++++ .++.+.+|
T Consensus 251 ~~~~i~v~d~~~~~~~~~~~~~~~~-~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~ 304 (343)
T 1ri6_A 251 TASLITVFSVSEDGSVLSKEGFQPT-ET-QPRGFNVDHSGKYLIAAGQKSHHISVY 304 (343)
T ss_dssp TTTEEEEEEECTTSCCEEEEEEEEC-SS-SCCCEEECTTSSEEEEECTTTCEEEEE
T ss_pred CCCEEEEEEEcCCCCceEEeeeecC-CC-ccceEEECCCCCEEEEecCCCCeEEEE
Confidence 2222 1122222322 23 388999999998776665 45555555
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.80 E-value=5.2e-17 Score=153.39 Aligned_cols=241 Identities=11% Similarity=0.070 Sum_probs=171.2
Q ss_pred ceeeEEEeccceeeeeec--ccceeeEEeecCCCCceEEEEcC----CCCEEEEEeC-CCcEEEEe-CCCCeEEeeccC-
Q 046394 15 VEKTWRIKQEAIAREVDI--LSSRNQYDIMLPELGPYTLDFTS----SGRYMAAAGC-KGYPYFYN-RDGTELHCSKEH- 85 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~--~~~~~~~~l~~~~~~v~~~~~sp----~g~~l~~~~~-dg~i~iwd-~~~~~~~~~~~~- 85 (378)
....|....++.|.+||+ .+++.+..+.. ...+.+++||| ||++|++++. +++|.||| .++.++..+..+
T Consensus 190 g~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g 268 (543)
T 1nir_A 190 GRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRG 268 (543)
T ss_dssp SCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCE
T ss_pred CCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccC
Confidence 445666677899999999 88888888885 46789999999 9999999885 89999999 566777766542
Q ss_pred ---------CC--eeEEEE------EEEEEeCCCeEEEEEcCCCcEEE--EEecCCCCeeEEEEcCCCCEEEEEcC-CCe
Q 046394 86 ---------GE--VLKLQF------LLASINKLGQLRYQNVTMGEIVG--NFWTGLGRTDVIRVNPFNGVVSLGHS-GGT 145 (378)
Q Consensus 86 ---------~~--~~~l~~------~l~s~~~d~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~ 145 (378)
.+ +.++.+ ++++...++.|.+||+.+.+.+. .+. +...+..++|+|+|++|++++. ++.
T Consensus 269 ~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~ 347 (543)
T 1nir_A 269 MTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNK 347 (543)
T ss_dssp ECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTE
T ss_pred cccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCe
Confidence 22 366766 78888899999999998765433 443 4567888999999998776553 444
Q ss_pred --------------ee----ecCCCEEEEEEecC-CCEEEEEE-CCCeEEEEEcCC-------ceeeeee--c-CCceEE
Q 046394 146 --------------ML----CHQGPVSALAFHPN-GHLMATSG-KDCKIKIWDLRK-------YEVLQTL--P-GHAKTL 195 (378)
Q Consensus 146 --------------~~----~h~~~v~~~~~sp~-g~~l~t~~-~d~~i~iwd~~~-------~~~~~~~--~-~~i~~~ 195 (378)
+. .|.+....+ ++|+ |..+++++ .|++|.|||+.+ ++++.++ + ..+..+
T Consensus 348 v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v 426 (543)
T 1nir_A 348 VAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFI 426 (543)
T ss_dssp EEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCE
T ss_pred EEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEE
Confidence 22 255444443 5787 66677775 689999999998 8888888 3 567889
Q ss_pred EEecCCCccc-----------------cCCCCCceE-EEe--------eccCCcceeeeEEcCCCCeEEEecCCCeEEEE
Q 046394 196 DFSRKDSGDF-----------------SGSHNYNRY-MGY--------SMVKGYQIGKVSFRPYEDVLGIGHSMGVSGIL 249 (378)
Q Consensus 196 ~~sp~g~~~~-----------------~~~~~~~~~-~~~--------~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~ 249 (378)
.|+|+|++.. |+..+.... ..+ .. +...+..+.|+|+|+.|.++...+
T Consensus 427 ~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~g~~~~~s~~~~----- 500 (543)
T 1nir_A 427 KTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGE-GAKRVVQPEYNKRGDEVWFSVWNG----- 500 (543)
T ss_dssp ECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCS-SCCEEEEEEECSSSSEEEEEEECC-----
T ss_pred EcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCC-CCCceEeccCCCCCCEEEEEeecC-----
Confidence 9999987633 333333333 222 12 467789999999998775442110
Q ss_pred EcCCCCcccccccCCCc
Q 046394 250 IPGSGEPNFDSWVANPF 266 (378)
Q Consensus 250 ~~~s~d~~i~~w~~~~~ 266 (378)
.+.|+.|.+||....
T Consensus 501 --~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 501 --KNDSSALVVVDDKTL 515 (543)
T ss_dssp --TTSCCEEEEEETTTT
T ss_pred --CCCCCeEEEEECCCc
Confidence 124566777765443
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.79 E-value=5.9e-17 Score=143.48 Aligned_cols=229 Identities=8% Similarity=-0.072 Sum_probs=160.1
Q ss_pred eEEEeccceeeeeecccceeeEEeecCCC--CceEEEEcCCCCEEEE-EeCCCcEEEEeC-CCCeEEeeccCC------C
Q 046394 18 TWRIKQEAIAREVDILSSRNQYDIMLPEL--GPYTLDFTSSGRYMAA-AGCKGYPYFYNR-DGTELHCSKEHG------E 87 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~~~~~~~l~~~~~--~v~~~~~sp~g~~l~~-~~~dg~i~iwd~-~~~~~~~~~~~~------~ 87 (378)
.+....++.|.+||+.+++.+..+..... .+.+++|+|+|+++++ ++.++.|.+||. ++..+..+.... .
T Consensus 4 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKS 83 (337)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccc
Confidence 44556789999999999998888775432 5889999999987654 455789999995 566666555322 3
Q ss_pred eeEEEE-----EEEEEe------------CCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe-----
Q 046394 88 VLKLQF-----LLASIN------------KLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT----- 145 (378)
Q Consensus 88 ~~~l~~-----~l~s~~------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~----- 145 (378)
+..++| .+++++ .++.|.+||+.+++.+..+.. ...+.+++|+|++++|++++..-.
T Consensus 84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~i~~~d~~ 162 (337)
T 1pby_B 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLGRDLHVMDPE 162 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEESSSEEEEETT
T ss_pred ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEeCCeEEEEECC
Confidence 467788 565554 579999999999988877765 456788999999998887732111
Q ss_pred -------eeecCCCEEEEEEecCCCEEEEEECC-C-----------------------eEEEEEcCCceeeeee-----c
Q 046394 146 -------MLCHQGPVSALAFHPNGHLMATSGKD-C-----------------------KIKIWDLRKYEVLQTL-----P 189 (378)
Q Consensus 146 -------~~~h~~~v~~~~~sp~g~~l~t~~~d-~-----------------------~i~iwd~~~~~~~~~~-----~ 189 (378)
+..+. ....+.|+|+|.+++.++.+ + .|.+||+.+++.. .+ .
T Consensus 163 ~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~ 240 (337)
T 1pby_B 163 AGTLVEDKPIQS-WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMD 240 (337)
T ss_dssp TTEEEEEECSTT-TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECS
T ss_pred CCcEeeeeeccc-cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCC
Confidence 11111 01123688888866554432 2 4689999998875 33 2
Q ss_pred CCceEEEEecCCCc--------cccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEEc
Q 046394 190 GHAKTLDFSRKDSG--------DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIP 251 (378)
Q Consensus 190 ~~i~~~~~sp~g~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~ 251 (378)
..+.+++|+|+|.+ .+|+..+...+..+.. ...+.+++|+|+|++|++++.++.+.+|..
T Consensus 241 ~~~~~~~~s~dg~~l~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 241 VFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPL--PHSYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp SCEEEEEECTTSSEEEEEESEEEEEETTTTEEEEEEEC--SSCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred CceeeEEECCCCCEEEEeCCeEEEEECCCCcCcceecC--CCceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 46788999999975 4556556655555543 345789999999988877766665555543
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.79 E-value=6.5e-18 Score=165.68 Aligned_cols=228 Identities=9% Similarity=0.011 Sum_probs=156.7
Q ss_pred eccceeeeeecccceeeEEeecCCC---CceEEEEcCCCCEEEEEeCC---------CcEEEEeCCCCeEEeecc---CC
Q 046394 22 KQEAIAREVDILSSRNQYDIMLPEL---GPYTLDFTSSGRYMAAAGCK---------GYPYFYNRDGTELHCSKE---HG 86 (378)
Q Consensus 22 ~~~~~i~~~d~~~~~~~~~l~~~~~---~v~~~~~sp~g~~l~~~~~d---------g~i~iwd~~~~~~~~~~~---~~ 86 (378)
..++.+++||+.+++....+..|.. .|.+++|||||++|++++.+ +.|++||..+.....+.. |.
T Consensus 34 ~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 113 (723)
T 1xfd_A 34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSN 113 (723)
T ss_dssp CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCS
T ss_pred eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccc
Confidence 5678999999999998888877764 49999999999999999774 778899965544444443 32
Q ss_pred C-eeEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCe------------------eEEEEcCCCCEEEEEcC
Q 046394 87 E-VLKLQF-----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRT------------------DVIRVNPFNGVVSLGHS 142 (378)
Q Consensus 87 ~-~~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v------------------~~~~~s~~~~~l~~~~~ 142 (378)
. +..++| .|+.++. +.|++||+.+++.......+...+ .+++|||||+.|++++.
T Consensus 114 ~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~ 192 (723)
T 1xfd_A 114 AKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (723)
T ss_dssp CCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred ccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence 2 366778 6676665 799999999888766655443333 78999999999988764
Q ss_pred CC----------------------------------e--------------eeec------CCCEEEEEEecCCCEEEEE
Q 046394 143 GG----------------------------------T--------------MLCH------QGPVSALAFHPNGHLMATS 168 (378)
Q Consensus 143 d~----------------------------------~--------------~~~h------~~~v~~~~~sp~g~~l~t~ 168 (378)
++ . +..+ ...+.+++|+|||++|++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~ 272 (723)
T 1xfd_A 193 NDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTW 272 (723)
T ss_dssp ECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEE
T ss_pred CCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEE
Confidence 42 1 1111 4567889999999988776
Q ss_pred ECC----CeEEEEEcCCceeeeee--c--CCc----eEEEEecCCCccccC-C-CCC-----ceEEEee---cc------
Q 046394 169 GKD----CKIKIWDLRKYEVLQTL--P--GHA----KTLDFSRKDSGDFSG-S-HNY-----NRYMGYS---MV------ 220 (378)
Q Consensus 169 ~~d----~~i~iwd~~~~~~~~~~--~--~~i----~~~~~sp~g~~~~~~-~-~~~-----~~~~~~~---~~------ 220 (378)
+.. ..|++||+.++++...+ + ..+ ..++|||||+..++. . ... ..+..+. ..
T Consensus 273 ~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (723)
T 1xfd_A 273 LNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQ 352 (723)
T ss_dssp EETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCC
T ss_pred EcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcccee
Confidence 533 57999999998876654 2 233 389999999975542 1 111 1122221 00
Q ss_pred ----CCcceee-eEEcCCCCeEEEecCC---CeEEEEE
Q 046394 221 ----KGYQIGK-VSFRPYEDVLGIGHSM---GVSGILI 250 (378)
Q Consensus 221 ----~~~~v~~-~~~sp~g~~l~~~~~~---g~~~~~~ 250 (378)
+...+.. ++|+|||+.|++.+.+ +...+|.
T Consensus 353 ~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 353 SITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp BSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred EeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence 1122333 6899999988765544 4455554
No 137
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.79 E-value=1.2e-17 Score=164.34 Aligned_cols=231 Identities=8% Similarity=0.017 Sum_probs=161.3
Q ss_pred eeeEEEec-cc-----eeeeeecccceeeEEeecCCCC------------------------ceEEEEcCCCCEEEEEeC
Q 046394 16 EKTWRIKQ-EA-----IAREVDILSSRNQYDIMLPELG------------------------PYTLDFTSSGRYMAAAGC 65 (378)
Q Consensus 16 ~~~~~~~~-~~-----~i~~~d~~~~~~~~~l~~~~~~------------------------v~~~~~sp~g~~l~~~~~ 65 (378)
...+.... ++ .|.+||+.+++....+..+... +.+++|||||++|++++.
T Consensus 49 ~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~ 128 (741)
T 2ecf_A 49 SRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG 128 (741)
T ss_dssp SEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET
T ss_pred CEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC
Confidence 34444554 66 8999999999877666654333 789999999999999986
Q ss_pred CCcEEEEeCCCC---eEEeeccCCCe-eEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCC------------
Q 046394 66 KGYPYFYNRDGT---ELHCSKEHGEV-LKLQF-----LLASINKLGQLRYQNVTMGEIVGNFWTGLGR------------ 124 (378)
Q Consensus 66 dg~i~iwd~~~~---~~~~~~~~~~~-~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~------------ 124 (378)
+.|++||..+. .+..+..+... ..++| .|++++ ++.|++||+.+++.......+...
T Consensus 129 -~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~ 206 (741)
T 2ecf_A 129 -GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADE 206 (741)
T ss_dssp -TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHH
T ss_pred -CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeee
Confidence 89999997665 66667777554 88999 677766 468999999988776544433322
Q ss_pred ----eeEEEEcCCCCEEEEEcCCC---------------------------------e-----ee------------ecC
Q 046394 125 ----TDVIRVNPFNGVVSLGHSGG---------------------------------T-----ML------------CHQ 150 (378)
Q Consensus 125 ----v~~~~~s~~~~~l~~~~~d~---------------------------------~-----~~------------~h~ 150 (378)
+..++|||||+.|++++.++ . +. .|.
T Consensus 207 ~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 286 (741)
T 2ecf_A 207 EMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQD 286 (741)
T ss_dssp HSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSS
T ss_pred ccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcc
Confidence 47899999999888876543 1 00 245
Q ss_pred CCEEEEEEecCCCEEEEEEC-----CCeEEEEEcCCceeeeee--cC-----CceEEEEecCCCccccCCCCC-ce----
Q 046394 151 GPVSALAFHPNGHLMATSGK-----DCKIKIWDLRKYEVLQTL--PG-----HAKTLDFSRKDSGDFSGSHNY-NR---- 213 (378)
Q Consensus 151 ~~v~~~~~sp~g~~l~t~~~-----d~~i~iwd~~~~~~~~~~--~~-----~i~~~~~sp~g~~~~~~~~~~-~~---- 213 (378)
..+.+++| |||++|++++. +..|++||+.++++...+ +. .+..++|+|||++.+.....+ ..
T Consensus 287 ~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 365 (741)
T 2ecf_A 287 IYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRI 365 (741)
T ss_dssp EEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEE
T ss_pred eEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEE
Confidence 56889999 99999987764 568999999998876665 22 457899999998422211111 01
Q ss_pred -----EEEeeccCCcceeee-EEcCCCCeEEE-ecCCC--eEEEEE
Q 046394 214 -----YMGYSMVKGYQIGKV-SFRPYEDVLGI-GHSMG--VSGILI 250 (378)
Q Consensus 214 -----~~~~~~~~~~~v~~~-~~sp~g~~l~~-~~~~g--~~~~~~ 250 (378)
...+.. +...|..+ .|+|+|+.|++ ++.++ .+.+|.
T Consensus 366 ~~~~~~~~l~~-~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 366 DSKGKAAALTH-GNWSVDELLAVDEKAGLAYFRAGIESARESQIYA 410 (741)
T ss_dssp CSSSCEEESCC-SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred cCCCCeeeeee-cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEE
Confidence 223333 45567776 59999987754 44443 444553
No 138
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.77 E-value=2.8e-16 Score=140.19 Aligned_cols=224 Identities=12% Similarity=0.101 Sum_probs=141.5
Q ss_pred ceeeeeec--ccceeeE-EeecCCCCceEEEEcCCCCEEEEEeC---CCcEEEEeCCCCe---EEeeccCCC-eeEEEE-
Q 046394 25 AIAREVDI--LSSRNQY-DIMLPELGPYTLDFTSSGRYMAAAGC---KGYPYFYNRDGTE---LHCSKEHGE-VLKLQF- 93 (378)
Q Consensus 25 ~~i~~~d~--~~~~~~~-~l~~~~~~v~~~~~sp~g~~l~~~~~---dg~i~iwd~~~~~---~~~~~~~~~-~~~l~~- 93 (378)
..+.+|++ .+++... ....+...+..++|+|+|+ |++++. ++.|.+|++.+.. +..+..+.. +..++|
T Consensus 16 ~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 16 QGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp CEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred CCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence 34555554 4454332 3344557788999999999 555544 6899999964433 333333443 488888
Q ss_pred ----EEEEEe-CCCeEEEEEcC-CCc--EEEEEecC---------CCCeeEEEEcCCCCEEEEEcCCCe-----e-----
Q 046394 94 ----LLASIN-KLGQLRYQNVT-MGE--IVGNFWTG---------LGRTDVIRVNPFNGVVSLGHSGGT-----M----- 146 (378)
Q Consensus 94 ----~l~s~~-~d~~i~iwd~~-~~~--~~~~~~~~---------~~~v~~~~~s~~~~~l~~~~~d~~-----~----- 146 (378)
++++++ .++.|.+|++. ++. .+..+... ...+.+++|+|+|+++++...++. +
T Consensus 95 pdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~ 174 (347)
T 3hfq_A 95 EARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQ 174 (347)
T ss_dssp TTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSC
T ss_pred CCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCc
Confidence 566665 78999999996 333 33333321 124788999999996665555554 0
Q ss_pred -------eec-CCCEEEEEEecCCCEEEE-EECCCeEEEEEcCC--cee--eeee---c------CCceEEEEecCCCcc
Q 046394 147 -------LCH-QGPVSALAFHPNGHLMAT-SGKDCKIKIWDLRK--YEV--LQTL---P------GHAKTLDFSRKDSGD 204 (378)
Q Consensus 147 -------~~h-~~~v~~~~~sp~g~~l~t-~~~d~~i~iwd~~~--~~~--~~~~---~------~~i~~~~~sp~g~~~ 204 (378)
..+ ...+..++|+|+|+++++ +..++.|.+|++.. ++. +..+ . ..+..++|+|||++.
T Consensus 175 ~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l 254 (347)
T 3hfq_A 175 LSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFL 254 (347)
T ss_dssp EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEE
T ss_pred EEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEE
Confidence 111 225678999999997655 55688999999874 543 2233 1 347889999999853
Q ss_pred -----------ccCCC---CCceEEEeeccCCcceeeeEEcCCCCeEEEecCC-CeEEEEE
Q 046394 205 -----------FSGSH---NYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSM-GVSGILI 250 (378)
Q Consensus 205 -----------~~~~~---~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~-g~~~~~~ 250 (378)
+|+.. ....+..... ++..+..++|+|||++|++++.+ +.+.+|.
T Consensus 255 ~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 255 YVSNRGYNTLAVFAVTADGHLTLIQQIST-EGDFPRDFDLDPTEAFVVVVNQNTDNATLYA 314 (347)
T ss_dssp EEEEETTTEEEEEEECGGGCEEEEEEEEC-SSSCCCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCEEEEEEECCCCcEEEeEEEec-CCCCcCeEEECCCCCEEEEEEcCCCcEEEEE
Confidence 22221 1122233333 45568899999999987776543 5555553
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.77 E-value=3.6e-16 Score=139.44 Aligned_cols=202 Identities=12% Similarity=0.099 Sum_probs=148.5
Q ss_pred CCceEEEEcCCCCEEEEEeC-------CCcEEEEeC-CCCeEEeeccCCCeeEEEE------EEEEEeCCCeEEEEEcCC
Q 046394 46 LGPYTLDFTSSGRYMAAAGC-------KGYPYFYNR-DGTELHCSKEHGEVLKLQF------LLASINKLGQLRYQNVTM 111 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~~~-------dg~i~iwd~-~~~~~~~~~~~~~~~~l~~------~l~s~~~d~~i~iwd~~~ 111 (378)
..+..++|+|+|++|++++. ++.|.+||. ++..+..+.....+..+.| ++++...++.|.+||+.+
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 120 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT 120 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCC
Confidence 57889999999999888874 468999994 5666777766555677777 566667789999999999
Q ss_pred CcEEEEEecCCCC---------eeEEEEcCCCCEEEEEc--CCCe--------------eeecCCCEEEEEEecCCCEEE
Q 046394 112 GEIVGNFWTGLGR---------TDVIRVNPFNGVVSLGH--SGGT--------------MLCHQGPVSALAFHPNGHLMA 166 (378)
Q Consensus 112 ~~~~~~~~~~~~~---------v~~~~~s~~~~~l~~~~--~d~~--------------~~~h~~~v~~~~~sp~g~~l~ 166 (378)
++.+..+..+... +.+++|+|+++.+++++ .++. +..+...+.+++|+|+|++++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 200 (353)
T 3vgz_A 121 GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLY 200 (353)
T ss_dssp CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEE
T ss_pred CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEE
Confidence 9998888765422 68899999999877766 3443 222445578899999999999
Q ss_pred EEECCCeEEEEEcCCceeeeee-c------CCceEEEEecCCCc-----------cccCCCCCceEEEeeccCCcceeee
Q 046394 167 TSGKDCKIKIWDLRKYEVLQTL-P------GHAKTLDFSRKDSG-----------DFSGSHNYNRYMGYSMVKGYQIGKV 228 (378)
Q Consensus 167 t~~~d~~i~iwd~~~~~~~~~~-~------~~i~~~~~sp~g~~-----------~~~~~~~~~~~~~~~~~~~~~v~~~ 228 (378)
+++.++.|.+||+.+++.+..+ . ..+..++|+|+|.+ .+|+..+...+..+.. . . ...+
T Consensus 201 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~-~-~~~~ 277 (353)
T 3vgz_A 201 TTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA-P-E-SLAV 277 (353)
T ss_dssp EECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC-S-S-CCCE
T ss_pred EEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc-C-C-CceE
Confidence 9999999999999999988776 1 23567999999985 3344444555444443 1 2 3578
Q ss_pred EEcCCCCeEEEec-CCCeEEEEE
Q 046394 229 SFRPYEDVLGIGH-SMGVSGILI 250 (378)
Q Consensus 229 ~~sp~g~~l~~~~-~~g~~~~~~ 250 (378)
.|+|+|+.|++++ .++.+.+|.
T Consensus 278 ~~s~dg~~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 278 LFNPARNEAYVTHRQAGKVSVID 300 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEECCCCeEEEEE
Confidence 9999998554433 455544443
No 140
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.76 E-value=2.2e-17 Score=151.80 Aligned_cols=131 Identities=11% Similarity=0.120 Sum_probs=97.7
Q ss_pred CCCCceEEEEcCCCCEEE----EEeCCCcEEEEeCCC---------C---eEEeeccCCCe-eEEEE------EEEEEeC
Q 046394 44 PELGPYTLDFTSSGRYMA----AAGCKGYPYFYNRDG---------T---ELHCSKEHGEV-LKLQF------LLASINK 100 (378)
Q Consensus 44 ~~~~v~~~~~sp~g~~l~----~~~~dg~i~iwd~~~---------~---~~~~~~~~~~~-~~l~~------~l~s~~~ 100 (378)
+...|.+++|+|+|++|+ +|+.|+.|+|||... . .+..+.+|... .+++| +|++++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 456799999999999999 778899999999421 1 14556677765 99999 8999999
Q ss_pred CCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcC
Q 046394 101 LGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLR 180 (378)
Q Consensus 101 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~ 180 (378)
||+|++||++++..+.... +|...|.+++|+|+|++|++|+.||+|++||++
T Consensus 171 Dg~v~iwD~~~~~~~~~~~----------------------------~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATL----------------------------PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp TSCEEEEEESSSEEEEEEE----------------------------CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCeEEEEEcCCCcceeecc----------------------------CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 9999999999886554443 456677777777777777777778888888776
Q ss_pred Cceeeeee--c----C----CceEEEEecCCCc
Q 046394 181 KYEVLQTL--P----G----HAKTLDFSRKDSG 203 (378)
Q Consensus 181 ~~~~~~~~--~----~----~i~~~~~sp~g~~ 203 (378)
+.....+ + . .+.+++|++++.+
T Consensus 223 -~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 223 -LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVF 254 (434)
T ss_dssp -CCEEEEECCCTTCCTTSCEEEEEEEEEETTEE
T ss_pred -CcccccccCCcccCCCCceeEEEEEEecCceE
Confidence 4444333 1 1 5677777776554
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.76 E-value=6.1e-17 Score=158.37 Aligned_cols=221 Identities=9% Similarity=0.067 Sum_probs=146.2
Q ss_pred eeEEEeccceeeeeecccceee-EEeecCC-----------------CCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCe
Q 046394 17 KTWRIKQEAIAREVDILSSRNQ-YDIMLPE-----------------LGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTE 78 (378)
Q Consensus 17 ~~~~~~~~~~i~~~d~~~~~~~-~~l~~~~-----------------~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~ 78 (378)
..+....++ | +||+.+++.+ ..+..|. ..|.+++|||| ..++.+. ++.|++||..+..
T Consensus 37 ~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~ 112 (706)
T 2z3z_A 37 NYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARK 112 (706)
T ss_dssp EEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTE
T ss_pred eEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CCEEEEEECCCCc
Confidence 444445556 7 9999999873 3333332 56999999999 6666654 5899999976666
Q ss_pred EEeeccCCC-eeEEEE-----EEEEEeCCCeEEEEEcCC-----CcEEEEEecCCCC--------------eeEEEEcCC
Q 046394 79 LHCSKEHGE-VLKLQF-----LLASINKLGQLRYQNVTM-----GEIVGNFWTGLGR--------------TDVIRVNPF 133 (378)
Q Consensus 79 ~~~~~~~~~-~~~l~~-----~l~s~~~d~~i~iwd~~~-----~~~~~~~~~~~~~--------------v~~~~~s~~ 133 (378)
...+..+.. +.+++| .|+++ .|+.|++||+.+ ++.......+... +.+++||||
T Consensus 113 ~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpD 191 (706)
T 2z3z_A 113 VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPK 191 (706)
T ss_dssp EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTT
T ss_pred eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCC
Confidence 666655554 477888 66664 679999999998 7766544333332 488999999
Q ss_pred CCEEEEEcCC-------------------------------Ce---------------e---eecCCCEEEEEEecCCCE
Q 046394 134 NGVVSLGHSG-------------------------------GT---------------M---LCHQGPVSALAFHPNGHL 164 (378)
Q Consensus 134 ~~~l~~~~~d-------------------------------~~---------------~---~~h~~~v~~~~~sp~g~~ 164 (378)
|++|++++.| +. + ..|...+.+++|+|||++
T Consensus 192 g~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 271 (706)
T 2z3z_A 192 GSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENI 271 (706)
T ss_dssp SSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSE
T ss_pred CCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCE
Confidence 9999988721 11 1 135567899999999999
Q ss_pred EEEEECCC-----eEEEEEcCCceeeeee----c-C---CceEEEEec--CCCccccCCC-----------CCceEEEee
Q 046394 165 MATSGKDC-----KIKIWDLRKYEVLQTL----P-G---HAKTLDFSR--KDSGDFSGSH-----------NYNRYMGYS 218 (378)
Q Consensus 165 l~t~~~d~-----~i~iwd~~~~~~~~~~----~-~---~i~~~~~sp--~g~~~~~~~~-----------~~~~~~~~~ 218 (378)
|++++.++ .|.+||+.+++....+ . . .+.+++|+| ||.+.+.... .......+.
T Consensus 272 l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 272 LYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp EEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC
T ss_pred EEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC
Confidence 99988775 8999999998433333 1 1 246789999 9875322211 222223333
Q ss_pred ccCCcceee-eEEcCCCCeEEEecCC
Q 046394 219 MVKGYQIGK-VSFRPYEDVLGIGHSM 243 (378)
Q Consensus 219 ~~~~~~v~~-~~~sp~g~~l~~~~~~ 243 (378)
. +...+.+ +.|+|+|+.|++++.+
T Consensus 352 ~-~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 352 K-GEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp C-SSSCEEEEEEECTTSSEEEEEESS
T ss_pred C-CCeEEEeeeEEcCCCCEEEEEecC
Confidence 3 4455666 7999999877655443
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.76 E-value=3.2e-17 Score=161.20 Aligned_cols=203 Identities=11% Similarity=0.031 Sum_probs=146.6
Q ss_pred CCCceEEEEcCCCCEEEEEeC-CC-----cEEEEeCC-CCeEEeeccCC-------------------------CeeEEE
Q 046394 45 ELGPYTLDFTSSGRYMAAAGC-KG-----YPYFYNRD-GTELHCSKEHG-------------------------EVLKLQ 92 (378)
Q Consensus 45 ~~~v~~~~~sp~g~~l~~~~~-dg-----~i~iwd~~-~~~~~~~~~~~-------------------------~~~~l~ 92 (378)
...+.+++|||||++|++++. |+ .|++||.. +.....+..+. .+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457899999999999999998 88 89999964 44444443321 136778
Q ss_pred E-----EEEEEeCCCeEEEEEcCCCc--EEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe-------------eeecCCC
Q 046394 93 F-----LLASINKLGQLRYQNVTMGE--IVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT-------------MLCHQGP 152 (378)
Q Consensus 93 ~-----~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-------------~~~h~~~ 152 (378)
| .|++++. +.|.+||+.++. .+..+..+...+.+++|||||++|++++.+.. ...+...
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~~~ 194 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGSTT 194 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCCSS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCccc
Confidence 8 6777765 999999998872 33455567788999999999999998875433 1112221
Q ss_pred ----------------EEEEEEecCCCEEEEEECCC---------------------------------eEEEEEcCC-c
Q 046394 153 ----------------VSALAFHPNGHLMATSGKDC---------------------------------KIKIWDLRK-Y 182 (378)
Q Consensus 153 ----------------v~~~~~sp~g~~l~t~~~d~---------------------------------~i~iwd~~~-~ 182 (378)
+.+++|||||++|++++.|+ .|.+||+.+ +
T Consensus 195 ~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~ 274 (741)
T 2ecf_A 195 IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQA 274 (741)
T ss_dssp EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTC
T ss_pred eeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCC
Confidence 47799999999999988765 889999988 7
Q ss_pred eeeeee-----cCCceEEEEecCCCccc---------------cCCCCCceEEEeeccCCc----ceeeeEEcCCCCeEE
Q 046394 183 EVLQTL-----PGHAKTLDFSRKDSGDF---------------SGSHNYNRYMGYSMVKGY----QIGKVSFRPYEDVLG 238 (378)
Q Consensus 183 ~~~~~~-----~~~i~~~~~sp~g~~~~---------------~~~~~~~~~~~~~~~~~~----~v~~~~~sp~g~~l~ 238 (378)
+..... ...+.+++| |||.+.+ |+..++........ +.. .+.++.|+|||++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~spdg~~~~ 352 (741)
T 2ecf_A 275 QTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE-TSPTWVPLHNSLRFLDDGSILW 352 (741)
T ss_dssp CCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE-ECSSCCCCCSCCEECTTSCEEE
T ss_pred ceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc-CCCCcCCcCCceEECCCCeEEE
Confidence 765433 245789999 9998533 33334444433333 222 456899999999988
Q ss_pred EecCCCeEEEEE
Q 046394 239 IGHSMGVSGILI 250 (378)
Q Consensus 239 ~~~~~g~~~~~~ 250 (378)
+++.+|...+|.
T Consensus 353 ~~~~~g~~~l~~ 364 (741)
T 2ecf_A 353 SSERTGFQHLYR 364 (741)
T ss_dssp EECTTSSCEEEE
T ss_pred EecCCCccEEEE
Confidence 888888666654
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.75 E-value=1.7e-16 Score=155.23 Aligned_cols=224 Identities=11% Similarity=0.093 Sum_probs=156.3
Q ss_pred eeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCC------CCeEEeeccCCC---
Q 046394 17 KTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRD------GTELHCSKEHGE--- 87 (378)
Q Consensus 17 ~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~------~~~~~~~~~~~~--- 87 (378)
+.+.+..++.+.+||+.+++.. .+..+...+.+++|||||++|+++ .++.|++||.. +........+..
T Consensus 93 ~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~ 170 (706)
T 2z3z_A 93 GLVVLFTQGGLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLV 170 (706)
T ss_dssp TEEEEEETTEEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEE
T ss_pred CeEEEEECCEEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeE
Confidence 4555666799999999888654 455566788999999999999985 67899999965 444443333322
Q ss_pred ------------eeEEEE-----EEEEEe---------------------------------CCCeEEEEEcCCCcEEEE
Q 046394 88 ------------VLKLQF-----LLASIN---------------------------------KLGQLRYQNVTMGEIVGN 117 (378)
Q Consensus 88 ------------~~~l~~-----~l~s~~---------------------------------~d~~i~iwd~~~~~~~~~ 117 (378)
+.++.| .|++++ .+..|.+||+.+++....
T Consensus 171 ~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~ 250 (706)
T 2z3z_A 171 YGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYL 250 (706)
T ss_dssp ESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEEC
T ss_pred cccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEee
Confidence 367888 677766 457899999998876544
Q ss_pred Ee--cCCCCeeEEEEcCCCCEEEEEcCCC-----e--------------ee--ecCC---CEEEEEEec--CCCEEEEEE
Q 046394 118 FW--TGLGRTDVIRVNPFNGVVSLGHSGG-----T--------------ML--CHQG---PVSALAFHP--NGHLMATSG 169 (378)
Q Consensus 118 ~~--~~~~~v~~~~~s~~~~~l~~~~~d~-----~--------------~~--~h~~---~v~~~~~sp--~g~~l~t~~ 169 (378)
.. .+...+.+++|+|||+.|++++.++ . +. .+.. .+.+++|+| +|+++++++
T Consensus 251 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~ 330 (706)
T 2z3z_A 251 QTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSR 330 (706)
T ss_dssp CCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEEC
T ss_pred ccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEc
Confidence 32 3456789999999999888876554 1 11 1111 235679999 999999999
Q ss_pred CCCeEEEEEcC-Cceeeeee--c-CCceE-EEEecCCCccccCCCCC----ceEEEeec--------cCCcceeeeEEcC
Q 046394 170 KDCKIKIWDLR-KYEVLQTL--P-GHAKT-LDFSRKDSGDFSGSHNY----NRYMGYSM--------VKGYQIGKVSFRP 232 (378)
Q Consensus 170 ~d~~i~iwd~~-~~~~~~~~--~-~~i~~-~~~sp~g~~~~~~~~~~----~~~~~~~~--------~~~~~v~~~~~sp 232 (378)
.|+.++||++. ++..+..+ + ..+.+ ++|+|+|...+...... ..+..+.. .+...+.+++|+|
T Consensus 331 ~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~sp 410 (706)
T 2z3z_A 331 RDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSP 410 (706)
T ss_dssp TTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECT
T ss_pred cCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECC
Confidence 99999999886 56666666 2 34555 79999998643322111 12222211 1345688999999
Q ss_pred CCCeEEEecC
Q 046394 233 YEDVLGIGHS 242 (378)
Q Consensus 233 ~g~~l~~~~~ 242 (378)
||++|+++..
T Consensus 411 dg~~l~~~~~ 420 (706)
T 2z3z_A 411 DGSAIIDIFQ 420 (706)
T ss_dssp TSSEEEEEEE
T ss_pred CCCEEEEEec
Confidence 9998876643
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.75 E-value=9.3e-17 Score=139.17 Aligned_cols=189 Identities=12% Similarity=0.055 Sum_probs=140.6
Q ss_pred eEEEeccceeeeeeccc-ceeeEEeecCC-CCceEEEEcCCCCEEEEEeC--CCcEEEE--eCCCCeEEeeccCCCeeEE
Q 046394 18 TWRIKQEAIAREVDILS-SRNQYDIMLPE-LGPYTLDFTSSGRYMAAAGC--KGYPYFY--NRDGTELHCSKEHGEVLKL 91 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~-~~~~~~l~~~~-~~v~~~~~sp~g~~l~~~~~--dg~i~iw--d~~~~~~~~~~~~~~~~~l 91 (378)
.+....++.|.+||+.+ ++.......|. ..+.+++|+|+|++|++++. ++.+.|| +..+.....+..+..+..+
T Consensus 55 ~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 134 (297)
T 2ojh_A 55 YLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWH 134 (297)
T ss_dssp EEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEE
T ss_pred EEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccce
Confidence 34445578999999999 77766665653 67889999999999999983 3445555 5555556666666666778
Q ss_pred EE------EEEEEeCCCeEEEEEcCC-CcEEEEEecCCCCeeEEEEcCCCCEEEEEcC-CCe---------------eee
Q 046394 92 QF------LLASINKLGQLRYQNVTM-GEIVGNFWTGLGRTDVIRVNPFNGVVSLGHS-GGT---------------MLC 148 (378)
Q Consensus 92 ~~------~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~---------------~~~ 148 (378)
.| ++++++.++.+.+|++.. +.....+..+...+.+++|+|++..|++++. ++. +..
T Consensus 135 ~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 135 GWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp EECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC
T ss_pred EECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec
Confidence 88 444788899999998642 2334556667788999999999998776653 444 445
Q ss_pred cCCCEEEEEEecCCCEEEEEECC-----------CeEEEEEcCCcee--eeee---cCCceEEEEecCCCcccc
Q 046394 149 HQGPVSALAFHPNGHLMATSGKD-----------CKIKIWDLRKYEV--LQTL---PGHAKTLDFSRKDSGDFS 206 (378)
Q Consensus 149 h~~~v~~~~~sp~g~~l~t~~~d-----------~~i~iwd~~~~~~--~~~~---~~~i~~~~~sp~g~~~~~ 206 (378)
|...+.+++|+|+|++|++++.+ +.|.+||+.+++. +..+ ...+.+++|+|+|.+.++
T Consensus 215 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 288 (297)
T 2ojh_A 215 SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAY 288 (297)
T ss_dssp CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEE
T ss_pred CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEE
Confidence 66678899999999999888866 5699999988765 3333 357899999999986544
No 145
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.74 E-value=2e-15 Score=135.46 Aligned_cols=226 Identities=10% Similarity=0.055 Sum_probs=142.1
Q ss_pred cceeeeeec--ccceeeEEeecCCCCceEEEEcCCCCEEEEEeCC----CcEEEEeCCC--CeE---EeeccCC-CeeEE
Q 046394 24 EAIAREVDI--LSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCK----GYPYFYNRDG--TEL---HCSKEHG-EVLKL 91 (378)
Q Consensus 24 ~~~i~~~d~--~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~d----g~i~iwd~~~--~~~---~~~~~~~-~~~~l 91 (378)
++.|.+|.+ .+++.......+...+..++|+|+|++|++++.+ +.|.+|+++. ..+ .....+. .+..+
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~ 105 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYL 105 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEE
T ss_pred CCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEE
Confidence 456777766 4454332222266788899999999999999885 7999998432 222 2333333 34667
Q ss_pred EE----EEEEEeCCCeEEEEEcCCCcEEE----EEe--c--------CCCCeeEEEEcCCCCEEEEEcC-CCe-----ee
Q 046394 92 QF----LLASINKLGQLRYQNVTMGEIVG----NFW--T--------GLGRTDVIRVNPFNGVVSLGHS-GGT-----ML 147 (378)
Q Consensus 92 ~~----~l~s~~~d~~i~iwd~~~~~~~~----~~~--~--------~~~~v~~~~~s~~~~~l~~~~~-d~~-----~~ 147 (378)
++ ++++...++.|.+|++.....+. .+. + +...+.+++|+|+|+++++++. ++. +.
T Consensus 106 ~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~ 185 (361)
T 3scy_A 106 TTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNIN 185 (361)
T ss_dssp EECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEc
Confidence 77 44444568999999997533221 111 1 1123578999999997666543 333 11
Q ss_pred ----------------------ecCCCEEEEEEecCCCEEEEEE-CCCeEEEEEcCCcee--eeee------cCCceEEE
Q 046394 148 ----------------------CHQGPVSALAFHPNGHLMATSG-KDCKIKIWDLRKYEV--LQTL------PGHAKTLD 196 (378)
Q Consensus 148 ----------------------~h~~~v~~~~~sp~g~~l~t~~-~d~~i~iwd~~~~~~--~~~~------~~~i~~~~ 196 (378)
.+...+.+++|+|+|+++++++ .++.|.+||+.++.+ +..+ ...+..++
T Consensus 186 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~ 265 (361)
T 3scy_A 186 PNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIH 265 (361)
T ss_dssp TTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEE
T ss_pred CCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEE
Confidence 1123467899999999887777 689999999987755 3333 13357999
Q ss_pred EecCCCccccCCCC-CceEEEeec-------------cCCcceeeeEEcCCCCeEEEec-CCCeEEEE
Q 046394 197 FSRKDSGDFSGSHN-YNRYMGYSM-------------VKGYQIGKVSFRPYEDVLGIGH-SMGVSGIL 249 (378)
Q Consensus 197 ~sp~g~~~~~~~~~-~~~~~~~~~-------------~~~~~v~~~~~sp~g~~l~~~~-~~g~~~~~ 249 (378)
|+|||++.+..... ...+..+.. ..+..+.+++|+|+|++|++++ .++.+.+|
T Consensus 266 ~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 266 LSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEE
Confidence 99999864322111 111111111 0133578899999999887776 45655554
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.73 E-value=3.5e-15 Score=132.34 Aligned_cols=190 Identities=9% Similarity=0.039 Sum_probs=132.4
Q ss_pred eeEEEecc-ceeeeeecc--cce--eeEEeecCCCCceEEEEcCCCCEEEEEeC-CCcEEEEeC-CC---CeEEeeccCC
Q 046394 17 KTWRIKQE-AIAREVDIL--SSR--NQYDIMLPELGPYTLDFTSSGRYMAAAGC-KGYPYFYNR-DG---TELHCSKEHG 86 (378)
Q Consensus 17 ~~~~~~~~-~~i~~~d~~--~~~--~~~~l~~~~~~v~~~~~sp~g~~l~~~~~-dg~i~iwd~-~~---~~~~~~~~~~ 86 (378)
..+....+ +.+.+|++. ++. .+..+..+ ..+.+++|+|+|++|++++. ++.|.+||. ++ ..+..+..+.
T Consensus 51 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 129 (343)
T 1ri6_A 51 YLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD 129 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT
T ss_pred EEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC
Confidence 34444444 899999997 444 34455555 48899999999998877765 888999996 22 3344555555
Q ss_pred CeeEEEE-----EEEEEe-CCCeEEEEEcCC-CcEEE----EEec-CCCCeeEEEEcCCCCEEEEEc-CCCe-----e--
Q 046394 87 EVLKLQF-----LLASIN-KLGQLRYQNVTM-GEIVG----NFWT-GLGRTDVIRVNPFNGVVSLGH-SGGT-----M-- 146 (378)
Q Consensus 87 ~~~~l~~-----~l~s~~-~d~~i~iwd~~~-~~~~~----~~~~-~~~~v~~~~~s~~~~~l~~~~-~d~~-----~-- 146 (378)
.+.+++| .+++++ .++.|.+||+.+ ++... .+.. ....+.+++|+|++.++++++ .++. +
T Consensus 130 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 130 GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred CceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 6688888 555555 899999999987 65432 2232 335788999999999776554 5554 1
Q ss_pred -----------e----ec--CCCEEEEEEecCCCEEEE-EECCCeEEEEEcC--C--ceeeeee--cCCceEEEEecCCC
Q 046394 147 -----------L----CH--QGPVSALAFHPNGHLMAT-SGKDCKIKIWDLR--K--YEVLQTL--PGHAKTLDFSRKDS 202 (378)
Q Consensus 147 -----------~----~h--~~~v~~~~~sp~g~~l~t-~~~d~~i~iwd~~--~--~~~~~~~--~~~i~~~~~sp~g~ 202 (378)
. ++ ...+.+++|+|+|++|++ +..++.|.+||+. + .+.+..+ ...+..++|+|+|.
T Consensus 210 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 289 (343)
T 1ri6_A 210 PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGK 289 (343)
T ss_dssp TTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSS
T ss_pred CCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCC
Confidence 0 00 124557999999988774 4478999999998 2 3445555 45589999999998
Q ss_pred ccccC
Q 046394 203 GDFSG 207 (378)
Q Consensus 203 ~~~~~ 207 (378)
+.+..
T Consensus 290 ~l~~~ 294 (343)
T 1ri6_A 290 YLIAA 294 (343)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 64443
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.73 E-value=7.4e-16 Score=137.12 Aligned_cols=196 Identities=10% Similarity=-0.035 Sum_probs=140.0
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeC-CCCeEEeeccCC--CeeEEEE------EEEEEeCCCeEEEEEcCCCcEEEEEec
Q 046394 50 TLDFTSSGRYMAAAGCKGYPYFYNR-DGTELHCSKEHG--EVLKLQF------LLASINKLGQLRYQNVTMGEIVGNFWT 120 (378)
Q Consensus 50 ~~~~sp~g~~l~~~~~dg~i~iwd~-~~~~~~~~~~~~--~~~~l~~------~l~s~~~d~~i~iwd~~~~~~~~~~~~ 120 (378)
++++++++.++++++.++.|.+||. ++..+..+..+. .+..++| +++++..++.|.+||+.+++.+..+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 4578888899999999999999995 556666676555 4577888 456667789999999999998877764
Q ss_pred CC------CCeeEEEEcCCCCEEEEEcCC------------Ce----------------eeecCCCEEEEEEecCCCEEE
Q 046394 121 GL------GRTDVIRVNPFNGVVSLGHSG------------GT----------------MLCHQGPVSALAFHPNGHLMA 166 (378)
Q Consensus 121 ~~------~~v~~~~~s~~~~~l~~~~~d------------~~----------------~~~h~~~v~~~~~sp~g~~l~ 166 (378)
.. ..+..++|+|+|+++++++.+ +. ...+...+.+++|+|+|+ ++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EE
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EE
Confidence 32 237889999999999988854 33 122444678899999999 55
Q ss_pred EEECCCeEEEEEcCCceeeeee--cC------------------------------------------------------
Q 046394 167 TSGKDCKIKIWDLRKYEVLQTL--PG------------------------------------------------------ 190 (378)
Q Consensus 167 t~~~d~~i~iwd~~~~~~~~~~--~~------------------------------------------------------ 190 (378)
+++. .|.+||+.+++.+..+ ..
T Consensus 163 ~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 240 (349)
T 1jmx_B 163 VAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL 240 (349)
T ss_dssp EESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEET
T ss_pred EccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEec
Confidence 5543 4999999988876655 21
Q ss_pred ---------------CceEEEEec-CCCc--------cccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeE
Q 046394 191 ---------------HAKTLDFSR-KDSG--------DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVS 246 (378)
Q Consensus 191 ---------------~i~~~~~sp-~g~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~ 246 (378)
.+..++|+| +|.+ .+|+..+...+..+.. ...+.+++|+|+|++|++++.++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~v 318 (349)
T 1jmx_B 241 KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANL--DHTYYCVAFDKKGDKLYLGGTFNDL 318 (349)
T ss_dssp TTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEESEEEEEETTTTEEEEEEEC--SSCCCEEEECSSSSCEEEESBSSEE
T ss_pred cCCcEEecccccCCCcceeeEecCCCCCEEEEEcCeEEEEECccCeEEEEEcC--CCCccceEECCCCCEEEEecCCCeE
Confidence 223556678 7753 4455555555555443 3347789999999877766655655
Q ss_pred EEEE
Q 046394 247 GILI 250 (378)
Q Consensus 247 ~~~~ 250 (378)
.+|.
T Consensus 319 ~v~d 322 (349)
T 1jmx_B 319 AVFN 322 (349)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5444
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.73 E-value=4.4e-17 Score=159.80 Aligned_cols=196 Identities=8% Similarity=0.015 Sum_probs=137.5
Q ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEeC-CCCeEEeeccCCC----eeEEEE-----EEEEEeCC---------CeEEEE
Q 046394 47 GPYTLDFTSSGRYMAAAGCKGYPYFYNR-DGTELHCSKEHGE----VLKLQF-----LLASINKL---------GQLRYQ 107 (378)
Q Consensus 47 ~v~~~~~sp~g~~l~~~~~dg~i~iwd~-~~~~~~~~~~~~~----~~~l~~-----~l~s~~~d---------~~i~iw 107 (378)
.+.+++|+|||+++++ +.||.|++||. ++.....+..|.. +.+++| .|++++.+ +.|.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4678999999997776 68999999994 5566666666653 688889 77777664 789999
Q ss_pred EcCCCcEEEEEec---CCCCeeEEEEcCCCCEEEEEcCCCe-------------eeecCCC------------------E
Q 046394 108 NVTMGEIVGNFWT---GLGRTDVIRVNPFNGVVSLGHSGGT-------------MLCHQGP------------------V 153 (378)
Q Consensus 108 d~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~d~~-------------~~~h~~~------------------v 153 (378)
|+.+++. ..+.. +...+..++|||||+.|+.++.... ...+... +
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~ 175 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH 175 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc
Confidence 9998876 33332 3334889999999999888876332 1222222 2
Q ss_pred EEEEEecCCCEEEEEECCC----------------------------------eEEEEEcCCceeeeee--c-------C
Q 046394 154 SALAFHPNGHLMATSGKDC----------------------------------KIKIWDLRKYEVLQTL--P-------G 190 (378)
Q Consensus 154 ~~~~~sp~g~~l~t~~~d~----------------------------------~i~iwd~~~~~~~~~~--~-------~ 190 (378)
.+++|||||++|++++.|+ .|++||+.+++....+ + .
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY 255 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccc
Confidence 7899999999999987653 7999999988765555 1 2
Q ss_pred CceEEEEecCCCcc--------------ccCCCCCceEEEeeccCCcce----eeeEEcCCCCeEEE--ecCCC
Q 046394 191 HAKTLDFSRKDSGD--------------FSGSHNYNRYMGYSMVKGYQI----GKVSFRPYEDVLGI--GHSMG 244 (378)
Q Consensus 191 ~i~~~~~sp~g~~~--------------~~~~~~~~~~~~~~~~~~~~v----~~~~~sp~g~~l~~--~~~~g 244 (378)
.+.+++|||||++. +|+..++.........+...+ ..+.|+|||+.|+. +..+|
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 329 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQG 329 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCS
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccC
Confidence 46889999999753 233333333333322122333 37899999997775 44566
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.72 E-value=3.3e-16 Score=159.57 Aligned_cols=179 Identities=12% Similarity=0.118 Sum_probs=139.9
Q ss_pred EeccceeeeeecccceeeEEeec-----------CCCCceEEEEc-CCCCEEEEEeCCCcEEEEeCCCCeEEeeccCCC-
Q 046394 21 IKQEAIAREVDILSSRNQYDIML-----------PELGPYTLDFT-SSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGE- 87 (378)
Q Consensus 21 ~~~~~~i~~~d~~~~~~~~~l~~-----------~~~~v~~~~~s-p~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~- 87 (378)
+..++.+.+||+... .+..+.. |...+.+++|| |||++|++++ ++.|.+|+..+.....+..|..
T Consensus 261 ~~~~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~ 338 (1045)
T 1k32_A 261 FSKGGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRI 338 (1045)
T ss_dssp EEETTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCE
T ss_pred EEeCCEEEEecCCce-EeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcc
Confidence 345778899998443 3345544 23368999999 9999999887 7899999976666666766665
Q ss_pred e-eEEEE----EEEEEeCCCeEE-EEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------ee
Q 046394 88 V-LKLQF----LLASINKLGQLR-YQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------ML 147 (378)
Q Consensus 88 ~-~~l~~----~l~s~~~d~~i~-iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~ 147 (378)
. ..+.| .+++++.++.+. +||+.+++... +..+...+..++|+|||++|++++.++. +.
T Consensus 339 ~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~ 417 (1045)
T 1k32_A 339 RYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER 417 (1045)
T ss_dssp EEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eEEeeeEcCCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc
Confidence 3 66666 677777788888 99998776544 4467788999999999999999988876 33
Q ss_pred ecCCCEEEEEEecCCCEEEEEECCC----------eEEEEEcCCceeeeee---cCCceEEEEecCCCc
Q 046394 148 CHQGPVSALAFHPNGHLMATSGKDC----------KIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSG 203 (378)
Q Consensus 148 ~h~~~v~~~~~sp~g~~l~t~~~d~----------~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g~~ 203 (378)
+|.+.+.+++|+|||++|++++.++ .|++||+.+++ +..+ ...+.+++|+|||.+
T Consensus 418 ~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~ 485 (1045)
T 1k32_A 418 SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKN 485 (1045)
T ss_dssp CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCE
T ss_pred CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCE
Confidence 7888899999999999999887654 89999999887 4444 356788999999985
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.72 E-value=6.5e-16 Score=147.71 Aligned_cols=218 Identities=9% Similarity=-0.026 Sum_probs=146.7
Q ss_pred eEEEec-cceeeeeecccceeeEEeecCC-CCceEEEEcCCCCEEEEEeC---CCcEEEEe--C--CCCeEEeeccCCCe
Q 046394 18 TWRIKQ-EAIAREVDILSSRNQYDIMLPE-LGPYTLDFTSSGRYMAAAGC---KGYPYFYN--R--DGTELHCSKEHGEV 88 (378)
Q Consensus 18 ~~~~~~-~~~i~~~d~~~~~~~~~l~~~~-~~v~~~~~sp~g~~l~~~~~---dg~i~iwd--~--~~~~~~~~~~~~~~ 88 (378)
.+..+. ++.+++|++.++.. ..+..|. ..+.+++|||| +.+++++. +....+|. . .+... .+....+.
T Consensus 36 la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~~~ 112 (582)
T 3o4h_A 36 LLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVKPM 112 (582)
T ss_dssp EEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSCSB
T ss_pred EEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCCCc
Confidence 333444 88999999966655 4555554 58899999999 77777765 44455654 5 55554 44444443
Q ss_pred eEEEE-------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCC----Ce------------
Q 046394 89 LKLQF-------LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSG----GT------------ 145 (378)
Q Consensus 89 ~~l~~-------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----~~------------ 145 (378)
...+| .+++++.++ +.+||+.+++.......+ . .+++|||||++|++++.+ ..
T Consensus 113 ~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 113 RILSGVDTGEAVVFTGATEDR-VALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp EEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred eeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 33344 444554444 559999998766555433 2 889999999999977655 22
Q ss_pred -eeecCCCEEEEEEecCCCEEEEEECCC--eEEEEEcCCceeeeee---cCCceEEE--------EecCCCccccCCCCC
Q 046394 146 -MLCHQGPVSALAFHPNGHLMATSGKDC--KIKIWDLRKYEVLQTL---PGHAKTLD--------FSRKDSGDFSGSHNY 211 (378)
Q Consensus 146 -~~~h~~~v~~~~~sp~g~~l~t~~~d~--~i~iwd~~~~~~~~~~---~~~i~~~~--------~sp~g~~~~~~~~~~ 211 (378)
+..|.+.+.+++|||||++|+++..++ .|++||+.+++.. .+ ...+..++ |||||.+.+......
T Consensus 189 ~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 189 VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG 267 (582)
T ss_dssp EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT
T ss_pred EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC
Confidence 566778899999999999999888888 8999999998877 44 24455666 999995322111111
Q ss_pred ceEEEee-c----cCCcceeeeEEcCCCCeEEEecCCCe
Q 046394 212 NRYMGYS-M----VKGYQIGKVSFRPYEDVLGIGHSMGV 245 (378)
Q Consensus 212 ~~~~~~~-~----~~~~~v~~~~~sp~g~~l~~~~~~g~ 245 (378)
....+. + .....|.+++|+ +|.++++++.+..
T Consensus 268 -~~~l~~~g~~~~~~~~~v~~~~~s-dg~~l~~~s~~~~ 304 (582)
T 3o4h_A 268 -RSAVFIDGERVEAPQGNHGRVVLW-RGKLVTSHTSLST 304 (582)
T ss_dssp -EEEEEETTEEECCCSSEEEEEEEE-TTEEEEEEEETTE
T ss_pred -cEEEEEECCeeccCCCceEEEEec-CCEEEEEEcCCCC
Confidence 111110 0 134568899999 9988888776654
No 151
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.70 E-value=8.9e-15 Score=129.33 Aligned_cols=202 Identities=8% Similarity=0.073 Sum_probs=139.5
Q ss_pred eEEEec-cceeeeeeccccee-eEEeecCCCCceEEEEcCCCCEEEEEeCCC---cEEEEeC-CCCeEEeeccCCCeeEE
Q 046394 18 TWRIKQ-EAIAREVDILSSRN-QYDIMLPELGPYTLDFTSSGRYMAAAGCKG---YPYFYNR-DGTELHCSKEHGEVLKL 91 (378)
Q Consensus 18 ~~~~~~-~~~i~~~d~~~~~~-~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg---~i~iwd~-~~~~~~~~~~~~~~~~l 91 (378)
.+.... ++.|.+||+.+++. ...+..+.....+++|+|+|++|+++..++ .|.+||. ++..+..+..+..+.++
T Consensus 54 l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~ 133 (331)
T 3u4y_A 54 VVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGI 133 (331)
T ss_dssp EEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEE
T ss_pred EEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccce
Confidence 444433 67999999999987 777777755555599999999999555553 8999995 55666667666667889
Q ss_pred EE------EEEEEeCCCe-EEEEEcCCCcEE----EEEecCCCCeeEEEEcCCCCEEEEEc-CCCe----------e---
Q 046394 92 QF------LLASINKLGQ-LRYQNVTMGEIV----GNFWTGLGRTDVIRVNPFNGVVSLGH-SGGT----------M--- 146 (378)
Q Consensus 92 ~~------~l~s~~~d~~-i~iwd~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~----------~--- 146 (378)
+| ++++...++. |.+|++.....+ .........+..++|+|+|+++++++ .++. .
T Consensus 134 ~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 213 (331)
T 3u4y_A 134 AISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITL 213 (331)
T ss_dssp EECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEE
T ss_pred EECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccce
Confidence 99 5566666678 999998754332 12223345688999999999665554 4554 1
Q ss_pred ---eecCCCEEEEEEecCCCEEEEEE-CCCeEEEEEcCCcee--eeee-------c---CCceEEEEecCCCccccCCCC
Q 046394 147 ---LCHQGPVSALAFHPNGHLMATSG-KDCKIKIWDLRKYEV--LQTL-------P---GHAKTLDFSRKDSGDFSGSHN 210 (378)
Q Consensus 147 ---~~h~~~v~~~~~sp~g~~l~t~~-~d~~i~iwd~~~~~~--~~~~-------~---~~i~~~~~sp~g~~~~~~~~~ 210 (378)
..+...+.+++|+|+|+++++++ .++.|.+||+.+++. +..+ . .....++|+|||.+.+.....
T Consensus 214 ~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 293 (331)
T 3u4y_A 214 LNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANI 293 (331)
T ss_dssp EEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT
T ss_pred eeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCC
Confidence 11234567899999999776554 577899999999887 3333 1 123568999999875444334
Q ss_pred CceEEEeec
Q 046394 211 YNRYMGYSM 219 (378)
Q Consensus 211 ~~~~~~~~~ 219 (378)
...+..+..
T Consensus 294 ~~~v~v~d~ 302 (331)
T 3u4y_A 294 SRELKVFTI 302 (331)
T ss_dssp TTEEEEEET
T ss_pred CCcEEEEEe
Confidence 444444443
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.70 E-value=4e-14 Score=126.10 Aligned_cols=189 Identities=10% Similarity=0.098 Sum_probs=130.4
Q ss_pred eEEEec---cceeeeeecccce--eeEEeecCCCCceEEEEcCCCCEEEEEe-CCCcEEEEeCC--CCe--EEeeccC--
Q 046394 18 TWRIKQ---EAIAREVDILSSR--NQYDIMLPELGPYTLDFTSSGRYMAAAG-CKGYPYFYNRD--GTE--LHCSKEH-- 85 (378)
Q Consensus 18 ~~~~~~---~~~i~~~d~~~~~--~~~~l~~~~~~v~~~~~sp~g~~l~~~~-~dg~i~iwd~~--~~~--~~~~~~~-- 85 (378)
.|.... ++.|.+||+.++. .+..+..+...+..++|+|+|++|++++ .++.|.+|+.. +.. +..+...
T Consensus 53 l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~ 132 (347)
T 3hfq_A 53 LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGH 132 (347)
T ss_dssp EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCC
T ss_pred EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCC
Confidence 555544 5899999997765 3444455677899999999999998888 67899999953 222 2222211
Q ss_pred --------CCeeEEEE-----EEEEEeCCCeEEEEEcC-CCcEE--EEEecC-CCCeeEEEEcCCCCEEEEEc-CCCe--
Q 046394 86 --------GEVLKLQF-----LLASINKLGQLRYQNVT-MGEIV--GNFWTG-LGRTDVIRVNPFNGVVSLGH-SGGT-- 145 (378)
Q Consensus 86 --------~~~~~l~~-----~l~s~~~d~~i~iwd~~-~~~~~--~~~~~~-~~~v~~~~~s~~~~~l~~~~-~d~~-- 145 (378)
..+.+++| ++++...++.|.+||+. ++... ..+... ...+..++|+|+|+++++++ .++.
T Consensus 133 ~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~ 212 (347)
T 3hfq_A 133 GPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIA 212 (347)
T ss_dssp CSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEE
Confidence 11366888 77777788999999998 55433 222332 23678899999999766654 3433
Q ss_pred ---ee-------------ecC------CCEEEEEEecCCCEE-EEEECCCeEEEEEcCC-c--eeeeee---cCCceEEE
Q 046394 146 ---ML-------------CHQ------GPVSALAFHPNGHLM-ATSGKDCKIKIWDLRK-Y--EVLQTL---PGHAKTLD 196 (378)
Q Consensus 146 ---~~-------------~h~------~~v~~~~~sp~g~~l-~t~~~d~~i~iwd~~~-~--~~~~~~---~~~i~~~~ 196 (378)
+. ... ..+..++|+|+|++| ++...++.|.+||+.. + ..+..+ ...+..++
T Consensus 213 v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~ 292 (347)
T 3hfq_A 213 SLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFD 292 (347)
T ss_dssp EEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEE
T ss_pred EEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEE
Confidence 11 111 347789999999987 5566789999999973 2 444444 24588999
Q ss_pred EecCCCcccc
Q 046394 197 FSRKDSGDFS 206 (378)
Q Consensus 197 ~sp~g~~~~~ 206 (378)
|+|||++.+.
T Consensus 293 ~spdg~~l~v 302 (347)
T 3hfq_A 293 LDPTEAFVVV 302 (347)
T ss_dssp ECTTSSEEEE
T ss_pred ECCCCCEEEE
Confidence 9999986443
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.69 E-value=3.4e-15 Score=152.19 Aligned_cols=229 Identities=9% Similarity=-0.026 Sum_probs=168.2
Q ss_pred ccceeeeeecccceeeEEeecCCC-CceEEEEcCCCCEEEEEeCCCcEE-EEeCCCCeEEeeccCCC-eeEEEE-----E
Q 046394 23 QEAIAREVDILSSRNQYDIMLPEL-GPYTLDFTSSGRYMAAAGCKGYPY-FYNRDGTELHCSKEHGE-VLKLQF-----L 94 (378)
Q Consensus 23 ~~~~i~~~d~~~~~~~~~l~~~~~-~v~~~~~sp~g~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~~-~~~l~~-----~ 94 (378)
.++.+.+|++.++... .+..|.. .+.+++|+ ||+.|++++.++.+. +||..+.....+..|.. +..++| .
T Consensus 315 ~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~ 392 (1045)
T 1k32_A 315 SRGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKF 392 (1045)
T ss_dssp ETTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSE
T ss_pred EcCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCE
Confidence 3678899998877643 4667767 78999999 999999998888888 88977666666666654 488899 8
Q ss_pred EEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCC----------e-------------eeecCC
Q 046394 95 LASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGG----------T-------------MLCHQG 151 (378)
Q Consensus 95 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~----------~-------------~~~h~~ 151 (378)
|++++.++.|++||+.+++....+..+...+.+++|+|||++|++++.++ . +..|..
T Consensus 393 la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~ 472 (1045)
T 1k32_A 393 AVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENS 472 (1045)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSS
T ss_pred EEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCc
Confidence 89999999999999999998888778888999999999999998877643 1 445677
Q ss_pred CEEEEEEecCCCEEEEEECCCeEEEEEcCCcee-------------------------------------------eeee
Q 046394 152 PVSALAFHPNGHLMATSGKDCKIKIWDLRKYEV-------------------------------------------LQTL 188 (378)
Q Consensus 152 ~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~-------------------------------------------~~~~ 188 (378)
.+.+++|+|+|++|++++.++...+|+...... +..+
T Consensus 473 ~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l 552 (1045)
T 1k32_A 473 HDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPI 552 (1045)
T ss_dssp BEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEEC
T ss_pred ccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEc
Confidence 788999999999999999888777776433211 1112
Q ss_pred --c-CCceEEEEecCCCcccc------------CCCCCceEEEeecc------CCcceeeeEEcCCCCeEEEecCCCeEE
Q 046394 189 --P-GHAKTLDFSRKDSGDFS------------GSHNYNRYMGYSMV------KGYQIGKVSFRPYEDVLGIGHSMGVSG 247 (378)
Q Consensus 189 --~-~~i~~~~~sp~g~~~~~------------~~~~~~~~~~~~~~------~~~~v~~~~~sp~g~~l~~~~~~g~~~ 247 (378)
+ ..+..++++|||.+.+. .......+..+... -...+..++|||||+.|++++.++ +.
T Consensus 553 ~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~v~~~~~S~DG~~l~~~~~~~-i~ 631 (1045)
T 1k32_A 553 NVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDLRLSADRKTVMVRKDDG-KI 631 (1045)
T ss_dssp SCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEEEEEEEEEECTTSCEEEEEETTS-CE
T ss_pred CCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEeecCcceEEECCCCCEEEEEcCCc-EE
Confidence 2 45678999999975442 11111122222110 013578899999999999998875 45
Q ss_pred EEEcCCC
Q 046394 248 ILIPGSG 254 (378)
Q Consensus 248 ~~~~~s~ 254 (378)
+|....+
T Consensus 632 ~~d~~~~ 638 (1045)
T 1k32_A 632 YTFPLEK 638 (1045)
T ss_dssp EEEESSC
T ss_pred EEeCccC
Confidence 5554443
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.69 E-value=5.9e-16 Score=148.00 Aligned_cols=201 Identities=14% Similarity=0.098 Sum_probs=141.1
Q ss_pred CCCceEEEEcCCCCEEEEEeC-CCcEEEEeCCCCeEEeeccCC-C-eeEEEE----EEEEEeC---CCeEEEEEcCC---
Q 046394 45 ELGPYTLDFTSSGRYMAAAGC-KGYPYFYNRDGTELHCSKEHG-E-VLKLQF----LLASINK---LGQLRYQNVTM--- 111 (378)
Q Consensus 45 ~~~v~~~~~sp~g~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~-~-~~~l~~----~l~s~~~---d~~i~iwd~~~--- 111 (378)
...|++++|+|||++||+++. ||++.||++++.....+..+. . +..+.| ++++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~ 100 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRP 100 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTST
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCCeEEEEeccCCCCcceEEEEEeccCC
Confidence 357999999999999999887 999999998777777776665 3 377777 5565554 45556655433
Q ss_pred CcEEEEEecCCCCeeEEEEcCCCC--EEEEEcCCCe------------eeecCCCEEEEEEecCCCEEEEEECC----Ce
Q 046394 112 GEIVGNFWTGLGRTDVIRVNPFNG--VVSLGHSGGT------------MLCHQGPVSALAFHPNGHLMATSGKD----CK 173 (378)
Q Consensus 112 ~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~d~~------------~~~h~~~v~~~~~sp~g~~l~t~~~d----~~ 173 (378)
+... .+.. ...+...+|+|+++ .+++++.++. +..+.. .+++|||||++|++++.+ +.
T Consensus 101 g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~ 176 (582)
T 3o4h_A 101 GEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVS 176 (582)
T ss_dssp TCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEE
T ss_pred Cccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeE
Confidence 3322 3322 23455678888885 4455555544 223333 789999999999988877 78
Q ss_pred EEEEEcCCceeeeee--cCCceEEEEecCCCcc------------ccCCCCCceEEEeeccCCcceeeeE--------Ec
Q 046394 174 IKIWDLRKYEVLQTL--PGHAKTLDFSRKDSGD------------FSGSHNYNRYMGYSMVKGYQIGKVS--------FR 231 (378)
Q Consensus 174 i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~~------------~~~~~~~~~~~~~~~~~~~~v~~~~--------~s 231 (378)
|++||+.+++..... ...+..++|||||+.. +|+..+.... .... +...+..+. |+
T Consensus 177 i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~s 254 (582)
T 3o4h_A 177 LFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLEL-PSKDFSSYRPTAITWLGYL 254 (582)
T ss_dssp EEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCC-SCSHHHHHCCSEEEEEEEC
T ss_pred EEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccC-CCcChhhhhhccccceeEc
Confidence 999999988765333 3668999999999863 3343333333 3333 555677778 99
Q ss_pred CCCCeEEEecCCCeEEEEEc
Q 046394 232 PYEDVLGIGHSMGVSGILIP 251 (378)
Q Consensus 232 p~g~~l~~~~~~g~~~~~~~ 251 (378)
|||.++++++.+|.+.+|..
T Consensus 255 pdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 255 PDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp TTSCEEEEEEETTEEEEEET
T ss_pred CCCcEEEEEEcCCcEEEEEE
Confidence 99988888988998887765
No 155
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.69 E-value=6.2e-16 Score=142.12 Aligned_cols=181 Identities=12% Similarity=0.024 Sum_probs=126.4
Q ss_pred ceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC-----------CeE------EeeccCCC
Q 046394 25 AIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG-----------TEL------HCSKEHGE 87 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~-----------~~~------~~~~~~~~ 87 (378)
..+++|+... ..+...+..+++++++.++++++.+| ++||+... ..+ ..+.....
T Consensus 23 ~~vri~~~~~-------~~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPE-------ELPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCS-------SCCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCcc-------ccCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 4677776421 12345688999999999999999888 88887210 111 11221223
Q ss_pred eeEEEE-----EEE----EEeCCCeEEEEEcCCC--------cEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecC
Q 046394 88 VLKLQF-----LLA----SINKLGQLRYQNVTMG--------EIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQ 150 (378)
Q Consensus 88 ~~~l~~-----~l~----s~~~d~~i~iwd~~~~--------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~ 150 (378)
+.+++| +|+ +++.|+.|++||+.++ +++..+.. +.+|.
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~-------------------------~~~h~ 149 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKL-------------------------LKDAG 149 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEEC-------------------------CCSGG
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeec-------------------------cCCCC
Confidence 588999 666 7888999999998754 11111111 23688
Q ss_pred CCEEEEEEecC-CCEEEEEECCCeEEEEEcCCceeeeee---cCCceEEEEecCCCc----------cccCCCCCceEEE
Q 046394 151 GPVSALAFHPN-GHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSG----------DFSGSHNYNRYMG 216 (378)
Q Consensus 151 ~~v~~~~~sp~-g~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g~~----------~~~~~~~~~~~~~ 216 (378)
..|.+++|+|+ +++|++++.||+|++||++++..+... ...+++++|+|+|.+ .+|+.. ......
T Consensus 150 ~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~ 228 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKV 228 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEE
T ss_pred CceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cccccc
Confidence 99999999997 899999999999999999998766544 368999999999875 456654 233333
Q ss_pred eec------cCCcceeeeEEcCCCCeEEE
Q 046394 217 YSM------VKGYQIGKVSFRPYEDVLGI 239 (378)
Q Consensus 217 ~~~------~~~~~v~~~~~sp~g~~l~~ 239 (378)
+.. .|...|.++.|++++.++++
T Consensus 229 ~~~~~~~~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 229 IPCPPFYESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp ECCCTTCCTTSCEEEEEEEEEETTEEEEE
T ss_pred ccCCcccCCCCceeEEEEEEecCceEEEE
Confidence 322 02237999999999877754
No 156
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.69 E-value=7e-15 Score=133.01 Aligned_cols=215 Identities=11% Similarity=-0.046 Sum_probs=139.5
Q ss_pred eeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCC-CCeEEeeccCCCe-eEEEE-------EEE
Q 046394 26 IAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRD-GTELHCSKEHGEV-LKLQF-------LLA 96 (378)
Q Consensus 26 ~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~-~~l~~-------~l~ 96 (378)
.|.+||+.+++......++...+.+++|||||+.|++++.++.|++||.. +.....+..+... ....| +++
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~ 140 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLV 140 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEE
T ss_pred eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeec
Confidence 48888999888776666665666678999999999999999999999954 4444444444443 22333 333
Q ss_pred E----------------------EeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcC-CCCEEEEEcCCC------e--
Q 046394 97 S----------------------INKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNP-FNGVVSLGHSGG------T-- 145 (378)
Q Consensus 97 s----------------------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~------~-- 145 (378)
. .+.+..|.+||+.+++..... .+...+..++|+| +|+.|+.....+ .
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~ 219 (388)
T 3pe7_A 141 GIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMW 219 (388)
T ss_dssp EEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEE
T ss_pred cccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEE
Confidence 2 224478999999998765443 4556789999999 999887766432 1
Q ss_pred -----------eeecC--CCEEEEEEecCCCEEEEEEC-CC----eEEEEEcCCceee--eeecC------CceEEEEec
Q 046394 146 -----------MLCHQ--GPVSALAFHPNGHLMATSGK-DC----KIKIWDLRKYEVL--QTLPG------HAKTLDFSR 199 (378)
Q Consensus 146 -----------~~~h~--~~v~~~~~sp~g~~l~t~~~-d~----~i~iwd~~~~~~~--~~~~~------~i~~~~~sp 199 (378)
+..+. ..+..++|+|||+.|+..+. ++ .|.+||+.+++.. ..+.. ....+.|+|
T Consensus 220 ~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~sp 299 (388)
T 3pe7_A 220 LINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVG 299 (388)
T ss_dssp EEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEE
T ss_pred EEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEcc
Confidence 22233 24778899999998765543 22 3999999988743 23222 133457999
Q ss_pred CCCccccCC--------CCCceEE----------EeeccCCc-----------ceeeeEEcCCCCeEEEecC
Q 046394 200 KDSGDFSGS--------HNYNRYM----------GYSMVKGY-----------QIGKVSFRPYEDVLGIGHS 242 (378)
Q Consensus 200 ~g~~~~~~~--------~~~~~~~----------~~~~~~~~-----------~v~~~~~sp~g~~l~~~~~ 242 (378)
||...++.. .....+. .+.. +.. .+.+++|+|||+.|+.++.
T Consensus 300 dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~ 370 (388)
T 3pe7_A 300 DGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVAR-HDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD 370 (388)
T ss_dssp EECCC------------CCCCEEEEEETTTTEEEEEEE-CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred CCCcceeEeeeccccccCCCCEEEEEeccCCceEEecc-ccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence 998655321 1111121 2222 222 4778899999987776553
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.67 E-value=1.3e-15 Score=149.35 Aligned_cols=193 Identities=10% Similarity=0.028 Sum_probs=136.2
Q ss_pred CCeeecCCceeeEEEeccceeeeeecccceeeEEeecCCC---CceEEEEcCCCCEEEEEeC---------CCcEEEEeC
Q 046394 7 GGYLEAEGVEKTWRIKQEAIAREVDILSSRNQYDIMLPEL---GPYTLDFTSSGRYMAAAGC---------KGYPYFYNR 74 (378)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~---~v~~~~~sp~g~~l~~~~~---------dg~i~iwd~ 74 (378)
...+.+++ +.+....++.|.+||+.+++....+..|.. .+.+++|||||++|++++. ++.|++||.
T Consensus 20 ~~~~s~dg--~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWISGQ--EYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESSSS--EEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCC--eEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 34455555 344455688999999999988777766543 4899999999999998876 689999997
Q ss_pred CCCeE---EeeccCCCeeEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEEe-cCCCC-----------------eeEE
Q 046394 75 DGTEL---HCSKEHGEVLKLQF-----LLASINKLGQLRYQNVTMGEIVGNFW-TGLGR-----------------TDVI 128 (378)
Q Consensus 75 ~~~~~---~~~~~~~~~~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~-----------------v~~~ 128 (378)
.+... ..+. ..+..++| .|+.+. ++.|++||+.+++...... ++... ..++
T Consensus 98 ~~g~~~~~~~l~--~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 98 SNGEFVRGNELP--RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTTEECCSSCCC--SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCCccccceecC--cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 66554 3332 33577888 666664 7899999998887654322 22121 2489
Q ss_pred EEcCCCCEEEEEcCCC----------------------------------e----------e------------eecCCC
Q 046394 129 RVNPFNGVVSLGHSGG----------------------------------T----------M------------LCHQGP 152 (378)
Q Consensus 129 ~~s~~~~~l~~~~~d~----------------------------------~----------~------------~~h~~~ 152 (378)
+|||||+.|++++.+. . . .+|...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 9999999999887541 1 1 135667
Q ss_pred EEEEEEecCCCEEEEEECC----CeEEEEE----cCCceeeeee-------cCCce-----EEEEecCCCcc
Q 046394 153 VSALAFHPNGHLMATSGKD----CKIKIWD----LRKYEVLQTL-------PGHAK-----TLDFSRKDSGD 204 (378)
Q Consensus 153 v~~~~~sp~g~~l~t~~~d----~~i~iwd----~~~~~~~~~~-------~~~i~-----~~~~sp~g~~~ 204 (378)
+.+++|+||++++++.... ..|.+|| +.++++...+ ...+. .+.|+|||...
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 326 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISY 326 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCE
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeE
Confidence 8999999998877775432 2588999 8777654322 23455 88999999853
No 158
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.67 E-value=1.9e-14 Score=127.21 Aligned_cols=182 Identities=12% Similarity=0.082 Sum_probs=135.4
Q ss_pred EEeccceeeeeecccceeeEEeecCC-----CCceEEEEcCCCCEEEEEe------------CCCcEEEEeCC-CCeEEe
Q 046394 20 RIKQEAIAREVDILSSRNQYDIMLPE-----LGPYTLDFTSSGRYMAAAG------------CKGYPYFYNRD-GTELHC 81 (378)
Q Consensus 20 ~~~~~~~i~~~d~~~~~~~~~l~~~~-----~~v~~~~~sp~g~~l~~~~------------~dg~i~iwd~~-~~~~~~ 81 (378)
....++.|.+||+.+++.+..+.... ..+.+++|+|+|++|++++ .++.|.+||.. +..+..
T Consensus 51 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~ 130 (337)
T 1pby_B 51 TVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKA 130 (337)
T ss_dssp EETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEE
T ss_pred EeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEE
Confidence 33446899999999998877776431 2678999999999998886 57999999964 455556
Q ss_pred eccCCCeeEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe-----------
Q 046394 82 SKEHGEVLKLQF-----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT----------- 145 (378)
Q Consensus 82 ~~~~~~~~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~----------- 145 (378)
+.....+.+++| .++++ ++.|.+||+.+++.+..+..+.. ...+.|+|++..+++++..+.
T Consensus 131 ~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 207 (337)
T 1pby_B 131 FEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARK 207 (337)
T ss_dssp EECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBT
T ss_pred EeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeecccc
Confidence 655445577888 45555 68899999999998877765431 113378888876544432211
Q ss_pred ----------------------------eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--cCCceEE
Q 046394 146 ----------------------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--PGHAKTL 195 (378)
Q Consensus 146 ----------------------------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~~~i~~~ 195 (378)
+..+...+.+++|+|+|++++++ ++.|.+||+.+++.+..+ ...+.++
T Consensus 208 ~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~ 285 (337)
T 1pby_B 208 DIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSV 285 (337)
T ss_dssp TSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEE
T ss_pred ccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeE
Confidence 22344567889999999998888 799999999999988877 5678999
Q ss_pred EEecCCCcccc
Q 046394 196 DFSRKDSGDFS 206 (378)
Q Consensus 196 ~~sp~g~~~~~ 206 (378)
+|+|+|.+.+.
T Consensus 286 ~~s~dg~~l~~ 296 (337)
T 1pby_B 286 NVSTDGSTVWL 296 (337)
T ss_dssp EECTTSCEEEE
T ss_pred EECCCCCEEEE
Confidence 99999985443
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.66 E-value=6.6e-14 Score=124.43 Aligned_cols=196 Identities=13% Similarity=0.074 Sum_probs=139.2
Q ss_pred CeeecCCceeeEEEeccceeeeeecccceeeEEeecCC-CCceEEEEcCCCCEEEEE-eCCCcEEEEeCC-CCeEEeecc
Q 046394 8 GYLEAEGVEKTWRIKQEAIAREVDILSSRNQYDIMLPE-LGPYTLDFTSSGRYMAAA-GCKGYPYFYNRD-GTELHCSKE 84 (378)
Q Consensus 8 ~~l~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~-~~v~~~~~sp~g~~l~~~-~~dg~i~iwd~~-~~~~~~~~~ 84 (378)
|.-...+....+....++.|.+||+.+++....+..+. ..+..++|+|+|++++++ ..++.|.+||.. +..+..+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 33333344455556678999999999999888887653 268899999999876544 568899999954 555555553
Q ss_pred CCC-------eeEEEE-----EEEEEeCC------------CeEEEEEcCCCc---EEEEEecCCCCeeEEEEcCCCCEE
Q 046394 85 HGE-------VLKLQF-----LLASINKL------------GQLRYQNVTMGE---IVGNFWTGLGRTDVIRVNPFNGVV 137 (378)
Q Consensus 85 ~~~-------~~~l~~-----~l~s~~~d------------~~i~iwd~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l 137 (378)
+.. +..++| .+++++.+ +.|.+||+.+++ .+..+. +...+.+++|+|+|+ +
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-L 161 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-E
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-E
Confidence 321 467788 66666654 899999998844 333443 334688999999999 5
Q ss_pred EEEcCCCe------------eeecC-------------------------------------------------------
Q 046394 138 SLGHSGGT------------MLCHQ------------------------------------------------------- 150 (378)
Q Consensus 138 ~~~~~d~~------------~~~h~------------------------------------------------------- 150 (378)
++++.+-. +..+.
T Consensus 162 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 241 (349)
T 1jmx_B 162 YVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 241 (349)
T ss_dssp EEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETT
T ss_pred EEccCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEecc
Confidence 55443311 11110
Q ss_pred -------------CCEEEEEEec-CCCEEEEEECCCeEEEEEcCCceeeeee--cCCceEEEEecCCCccccC
Q 046394 151 -------------GPVSALAFHP-NGHLMATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSGDFSG 207 (378)
Q Consensus 151 -------------~~v~~~~~sp-~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~~~~~ 207 (378)
..+.+++|+| +|++++++ ++.|.+||+.+++.+..+ ...+.+++|+|+|.+.+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 242 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLG 312 (349)
T ss_dssp TCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEE
T ss_pred CCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEe
Confidence 1345677889 99998888 889999999999988877 5668899999999765443
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.61 E-value=2.2e-15 Score=147.73 Aligned_cols=198 Identities=12% Similarity=0.069 Sum_probs=130.4
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEeCC-CCeEEeeccCCC----eeEEEE-----EEEEEeC---------CCeEEEEEc
Q 046394 49 YTLDFTSSGRYMAAAGCKGYPYFYNRD-GTELHCSKEHGE----VLKLQF-----LLASINK---------LGQLRYQNV 109 (378)
Q Consensus 49 ~~~~~sp~g~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~----~~~l~~-----~l~s~~~---------d~~i~iwd~ 109 (378)
.+++|+|+|.+++ .+.|+.|++||.. +.....+..+.. +.+++| .|++++. ++.|++||+
T Consensus 19 ~~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 3789999996555 4569999999964 455555554433 578888 6776665 789999999
Q ss_pred CCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCCE-----------------EEEEE
Q 046394 110 TMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPV-----------------SALAF 158 (378)
Q Consensus 110 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~v-----------------~~~~~ 158 (378)
.+++.+.... ....+..++|||||+.|+.+..+.. ..++...| .+++|
T Consensus 98 ~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w 176 (719)
T 1z68_A 98 SNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWW 176 (719)
T ss_dssp TTTEECCSSC-CCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEE
T ss_pred CCCcccccee-cCcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEE
Confidence 9887621111 1256889999999999988764322 11222222 48999
Q ss_pred ecCCCEEEEEECCC----------------------------------eEEEEEcCCceee---e-----ee---cCCce
Q 046394 159 HPNGHLMATSGKDC----------------------------------KIKIWDLRKYEVL---Q-----TL---PGHAK 193 (378)
Q Consensus 159 sp~g~~l~t~~~d~----------------------------------~i~iwd~~~~~~~---~-----~~---~~~i~ 193 (378)
||||++|++++.|. .|++||+.+++.. . .+ ...+.
T Consensus 177 SPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (719)
T 1z68_A 177 SPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFS 256 (719)
T ss_dssp CTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEE
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEE
Confidence 99999999988652 7889999987653 1 12 23578
Q ss_pred EEEEecCCCcccc--------------C----CCCCceEEEe----eccCCccee-----eeEEcCCCCeEEE--ecCCC
Q 046394 194 TLDFSRKDSGDFS--------------G----SHNYNRYMGY----SMVKGYQIG-----KVSFRPYEDVLGI--GHSMG 244 (378)
Q Consensus 194 ~~~~sp~g~~~~~--------------~----~~~~~~~~~~----~~~~~~~v~-----~~~~sp~g~~l~~--~~~~g 244 (378)
+++|||||.+.+. + ..++...... .. +...+. .+.|+|||+.|+. +..+|
T Consensus 257 ~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g 335 (719)
T 1z68_A 257 WLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEES-RTGWAGGFFVSTPVFSYDAISYYKIFSDKDG 335 (719)
T ss_dssp EEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEEC-SSSCSSSSSCCCCEECTTSSCEEEEEECTTS
T ss_pred EeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEeccccc-CCceEccccCCccEECCCCCeEEEEEEccCC
Confidence 9999999864222 2 2122221111 12 444565 7899999996543 55566
Q ss_pred eEEEE
Q 046394 245 VSGIL 249 (378)
Q Consensus 245 ~~~~~ 249 (378)
...++
T Consensus 336 ~~~l~ 340 (719)
T 1z68_A 336 YKHIH 340 (719)
T ss_dssp CEEEE
T ss_pred ceEEE
Confidence 55444
No 161
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.60 E-value=6.2e-13 Score=115.69 Aligned_cols=209 Identities=14% Similarity=0.060 Sum_probs=146.5
Q ss_pred ceeeEEeecCCCCceEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEeeccCCCe-eEEEE-----EEEEEeCCCeEEEE
Q 046394 35 SRNQYDIMLPELGPYTLDFTSSGR-YMAAAGCKGYPYFYNRDGTELHCSKEHGEV-LKLQF-----LLASINKLGQLRYQ 107 (378)
Q Consensus 35 ~~~~~~l~~~~~~v~~~~~sp~g~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~l~~-----~l~s~~~d~~i~iw 107 (378)
+..+..+..+...+.+++|+|+|+ +++++..++.|.+||..+. ...+..+... .+++| ++++...++.|.+|
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQ 95 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEE
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEE
Confidence 344455656666788999999998 6777888999999997776 6666666554 88888 66666667899999
Q ss_pred EcCCCcEEEEEecC----CCCeeEEEEcCCCCEEEE----EcC-------------CCe------------eeecCCCEE
Q 046394 108 NVTMGEIVGNFWTG----LGRTDVIRVNPFNGVVSL----GHS-------------GGT------------MLCHQGPVS 154 (378)
Q Consensus 108 d~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~----~~~-------------d~~------------~~~h~~~v~ 154 (378)
|..+++........ ...++.++++|+|.++++ |+. .+. +..+.....
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~ 175 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPN 175 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEE
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCCc
Confidence 99888765433221 235678999999998887 321 112 233445678
Q ss_pred EEEEecCCCEEEEEECCCeEEEEEcC-Ccee---eeee---cCCceEEEEecCCCcc--------ccCCCCCceEEEeec
Q 046394 155 ALAFHPNGHLMATSGKDCKIKIWDLR-KYEV---LQTL---PGHAKTLDFSRKDSGD--------FSGSHNYNRYMGYSM 219 (378)
Q Consensus 155 ~~~~sp~g~~l~t~~~d~~i~iwd~~-~~~~---~~~~---~~~i~~~~~sp~g~~~--------~~~~~~~~~~~~~~~ 219 (378)
.++|+|+|+.+++.+.++.|.+||+. ++.+ ...+ ...+..++++++|.+. +|+.. +..+..+..
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~v~~~~~~-g~~~~~~~~ 254 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASAGDGVHVLTPD-GDELGRVLT 254 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEETTEEEEECTT-SCEEEEEEC
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEcCCeEEEECCC-CCEEEEEEC
Confidence 99999999999777788999999997 4544 2222 3456789999998752 33332 344445544
Q ss_pred cCCcceeeeEE-cCCCCeEEEecCCCeEE
Q 046394 220 VKGYQIGKVSF-RPYEDVLGIGHSMGVSG 247 (378)
Q Consensus 220 ~~~~~v~~~~~-sp~g~~l~~~~~~g~~~ 247 (378)
+.. +++++| +|++..|.+++.+++..
T Consensus 255 -~~~-~~~~~f~~~d~~~L~v~t~~~l~~ 281 (296)
T 3e5z_A 255 -PQT-TSNLCFGGPEGRTLYMTVSTEFWS 281 (296)
T ss_dssp -SSC-CCEEEEESTTSCEEEEEETTEEEE
T ss_pred -CCC-ceeEEEECCCCCEEEEEcCCeEEE
Confidence 444 888999 58888887777776443
No 162
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.60 E-value=9.4e-13 Score=113.87 Aligned_cols=162 Identities=9% Similarity=0.085 Sum_probs=121.3
Q ss_pred CCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeecc------CC-CeeEEEE------EEEEEeC-CCeEEEEEc
Q 046394 44 PELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKE------HG-EVLKLQF------LLASINK-LGQLRYQNV 109 (378)
Q Consensus 44 ~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~-~~~~l~~------~l~s~~~-d~~i~iwd~ 109 (378)
+-..+.+++++|+|+++++...++.|.+||.++..+..+.. +. .+..+++ ++++... ++.|.+||
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d- 106 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN- 106 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-
Confidence 34578999999999988888889999999988887776643 11 3467776 4444433 78999999
Q ss_pred CCCcEEEEEec-CCCCeeEEEEcCCCCEEEEEcCCCe-------------ee--ecCCCEEEEEEecCCCEEEEEECCCe
Q 046394 110 TMGEIVGNFWT-GLGRTDVIRVNPFNGVVSLGHSGGT-------------ML--CHQGPVSALAFHPNGHLMATSGKDCK 173 (378)
Q Consensus 110 ~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~-------------~~--~h~~~v~~~~~sp~g~~l~t~~~d~~ 173 (378)
.+++.+..+.. +...+..++++|+|.++++...++. +. .+...+.+++++|+|+++++.+.++.
T Consensus 107 ~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~ 186 (286)
T 1q7f_A 107 QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHC 186 (286)
T ss_dssp TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTE
T ss_pred CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCE
Confidence 57777777643 3357899999999998777766554 11 23356899999999998888888999
Q ss_pred EEEEEcCCceeeeee--c---CCceEEEEecCCCccccC
Q 046394 174 IKIWDLRKYEVLQTL--P---GHAKTLDFSRKDSGDFSG 207 (378)
Q Consensus 174 i~iwd~~~~~~~~~~--~---~~i~~~~~sp~g~~~~~~ 207 (378)
|.+||. ++..+..+ . ..+..++++|+|.+.+.+
T Consensus 187 i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~ 224 (286)
T 1q7f_A 187 VKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIAD 224 (286)
T ss_dssp EEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEE
T ss_pred EEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEe
Confidence 999997 45666666 2 467899999999764444
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.60 E-value=1.4e-12 Score=115.34 Aligned_cols=198 Identities=9% Similarity=-0.042 Sum_probs=139.5
Q ss_pred CCceEEEEcCCCCEEEEEeCC------------------------CcEEEEeC-CCCeEEeecc-C-CCeeEEEE-----
Q 046394 46 LGPYTLDFTSSGRYMAAAGCK------------------------GYPYFYNR-DGTELHCSKE-H-GEVLKLQF----- 93 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~~~d------------------------g~i~iwd~-~~~~~~~~~~-~-~~~~~l~~----- 93 (378)
+.|.+++++|+|+++++.+.+ +.|.+||. ++..+..+.. + ..+..+++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 578999999999988887776 47999996 4776655542 2 23588888
Q ss_pred EEEEEeCCCeEEEEEcCCCc-EEEEEe---------cCCCCeeEEEEcC-CCCEEEEEc-CCCe-------------eee
Q 046394 94 LLASINKLGQLRYQNVTMGE-IVGNFW---------TGLGRTDVIRVNP-FNGVVSLGH-SGGT-------------MLC 148 (378)
Q Consensus 94 ~l~s~~~d~~i~iwd~~~~~-~~~~~~---------~~~~~v~~~~~s~-~~~~l~~~~-~d~~-------------~~~ 148 (378)
++++...++.|.+||..... .+..+. .+...+..++++| ++.++++.+ .++. +..
T Consensus 104 l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~ 183 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGE 183 (329)
T ss_dssp EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECE
T ss_pred EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEecc
Confidence 77888888999999985432 455552 2334688999999 778777775 4554 111
Q ss_pred ----------cCCCEEEEEEecC-CCEEEEEECCCeEEEEEcCCceeeeee-----cCCceEEEEec------CCCcc--
Q 046394 149 ----------HQGPVSALAFHPN-GHLMATSGKDCKIKIWDLRKYEVLQTL-----PGHAKTLDFSR------KDSGD-- 204 (378)
Q Consensus 149 ----------h~~~v~~~~~sp~-g~~l~t~~~d~~i~iwd~~~~~~~~~~-----~~~i~~~~~sp------~g~~~-- 204 (378)
+-.....|+++|+ |+++++...++.|++||..+++.+..+ ...+..++|+| +|...
T Consensus 184 ~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~ 263 (329)
T 3fvz_A 184 ESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFG 263 (329)
T ss_dssp ECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTT
T ss_pred CCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEec
Confidence 1123789999998 777888888999999999989988887 24677888988 55433
Q ss_pred --------ccCCCCCceEEEee---ccCCcceeeeEEcCCCCeEEEecCCC
Q 046394 205 --------FSGSHNYNRYMGYS---MVKGYQIGKVSFRPYEDVLGIGHSMG 244 (378)
Q Consensus 205 --------~~~~~~~~~~~~~~---~~~~~~v~~~~~sp~g~~l~~~~~~g 244 (378)
+|+..++..+..+. . +...+..++++|+|.++++...++
T Consensus 264 ~~~~~~v~~~~~~~g~~~~~~~~~~~-~~~~p~~ia~~~dG~lyvad~~~~ 313 (329)
T 3fvz_A 264 DQEPVQGFVMNFSSGEIIDVFKPVRK-HFDMPHDIVASEDGTVYIGDAHTN 313 (329)
T ss_dssp CSCCCCEEEEETTTCCEEEEECCSSS-CCSSEEEEEECTTSEEEEEESSSC
T ss_pred cCCCcEEEEEEcCCCeEEEEEcCCCC-ccCCeeEEEECCCCCEEEEECCCC
Confidence 33334445554442 2 455688899999994444444443
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.60 E-value=2.1e-13 Score=123.24 Aligned_cols=181 Identities=9% Similarity=-0.006 Sum_probs=128.1
Q ss_pred eeeeeecccceeeEEeecCCCCceE-----EEEcCCCCEEEEEeC-CC--cEEEEeCCCCeEEeec-cCCCe-eEEEE--
Q 046394 26 IAREVDILSSRNQYDIMLPELGPYT-----LDFTSSGRYMAAAGC-KG--YPYFYNRDGTELHCSK-EHGEV-LKLQF-- 93 (378)
Q Consensus 26 ~i~~~d~~~~~~~~~l~~~~~~v~~-----~~~sp~g~~l~~~~~-dg--~i~iwd~~~~~~~~~~-~~~~~-~~l~~-- 93 (378)
....+|..++..+..+..|...+.. .+|||||++|++++. +| .|.+||..+.....+. ++... ..+.|
T Consensus 11 ~~~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~sp 90 (388)
T 3pe7_A 11 FDTYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSP 90 (388)
T ss_dssp CEEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECT
T ss_pred ceEEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcC
Confidence 3344677888888888888666655 889999999998887 66 3888897655554444 44433 46778
Q ss_pred ---EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEE--EcCCCCEEEEEc----------------------CCCe-
Q 046394 94 ---LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIR--VNPFNGVVSLGH----------------------SGGT- 145 (378)
Q Consensus 94 ---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~--~s~~~~~l~~~~----------------------~d~~- 145 (378)
.|+.++.++.|++||+.+++....+..+...+.... ++|++..++... .+..
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (388)
T 3pe7_A 91 DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRL 170 (388)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceE
Confidence 888888889999999999987776665555554443 489998876421 1111
Q ss_pred ------------eeecCCCEEEEEEec-CCCEEEEEECC------CeEEEEEcCCceeeeee--c--CCceEEEEecCCC
Q 046394 146 ------------MLCHQGPVSALAFHP-NGHLMATSGKD------CKIKIWDLRKYEVLQTL--P--GHAKTLDFSRKDS 202 (378)
Q Consensus 146 ------------~~~h~~~v~~~~~sp-~g~~l~t~~~d------~~i~iwd~~~~~~~~~~--~--~~i~~~~~sp~g~ 202 (378)
+..+...+..++|+| +|+.|+.++.+ ..|.++|+..+...... . ..+..+.|||||.
T Consensus 171 ~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~ 250 (388)
T 3pe7_A 171 MRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGS 250 (388)
T ss_dssp EEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSS
T ss_pred EEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCC
Confidence 445667789999999 99999887754 36888887655433222 2 2477889999998
Q ss_pred cccc
Q 046394 203 GDFS 206 (378)
Q Consensus 203 ~~~~ 206 (378)
..++
T Consensus 251 ~l~~ 254 (388)
T 3pe7_A 251 ALVY 254 (388)
T ss_dssp CEEE
T ss_pred EEEE
Confidence 6433
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.57 E-value=1.1e-12 Score=117.76 Aligned_cols=204 Identities=14% Similarity=0.099 Sum_probs=129.2
Q ss_pred eEEEeccceeeeeecc-cceeeEEeecC-CCCceEEEEcCCCCE--EEEEe-------------CCCcEEEEeC--CCCe
Q 046394 18 TWRIKQEAIAREVDIL-SSRNQYDIMLP-ELGPYTLDFTSSGRY--MAAAG-------------CKGYPYFYNR--DGTE 78 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~-~~~~~~~l~~~-~~~v~~~~~sp~g~~--l~~~~-------------~dg~i~iwd~--~~~~ 78 (378)
.|....+ .+.+|++. +++........ .+.+.+++|+|+|++ +++++ .+|.+.+|++ ++..
T Consensus 54 l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~ 132 (365)
T 1jof_A 54 IYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKL 132 (365)
T ss_dssp EEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCE
T ss_pred EEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcC
Confidence 4444444 89999997 77654333211 134677999999994 45553 6889999995 4554
Q ss_pred EEeecc----C-CCeeEEEE-----EEEEEe-CCCeEEEEEcC-CCcEE--EEEec--CCCCeeEEEEcCCCCEEEEEcC
Q 046394 79 LHCSKE----H-GEVLKLQF-----LLASIN-KLGQLRYQNVT-MGEIV--GNFWT--GLGRTDVIRVNPFNGVVSLGHS 142 (378)
Q Consensus 79 ~~~~~~----~-~~~~~l~~-----~l~s~~-~d~~i~iwd~~-~~~~~--~~~~~--~~~~v~~~~~s~~~~~l~~~~~ 142 (378)
...+.. + ..+.+++| ++++++ .++.|.+||+. +++.. ..+.. +...+..++|+|+|+++++++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 212 (365)
T 1jof_A 133 EKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME 212 (365)
T ss_dssp EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET
T ss_pred cceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC
Confidence 433331 2 23588888 555544 46899999998 77653 33432 3566899999999998887764
Q ss_pred -CCe---e--e---------------------ecCC------CEEEEE-EecCCCEEEEEECC-C-----eEEEEEcC-C
Q 046394 143 -GGT---M--L---------------------CHQG------PVSALA-FHPNGHLMATSGKD-C-----KIKIWDLR-K 181 (378)
Q Consensus 143 -d~~---~--~---------------------~h~~------~v~~~~-~sp~g~~l~t~~~d-~-----~i~iwd~~-~ 181 (378)
++. + . +|.. .+..++ |+|||++|++++.+ + +|.+|++. +
T Consensus 213 ~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~ 292 (365)
T 1jof_A 213 AGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDC 292 (365)
T ss_dssp TTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTT
T ss_pred CCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCC
Confidence 333 0 0 0111 377899 99999988776543 2 89999986 4
Q ss_pred ceeeeeecCCceEEEEecCCCccccCCCCCceEEEeeccCCcceeeeEEcC---CCCeEEEecCC-CeEEEE
Q 046394 182 YEVLQTLPGHAKTLDFSRKDSGDFSGSHNYNRYMGYSMVKGYQIGKVSFRP---YEDVLGIGHSM-GVSGIL 249 (378)
Q Consensus 182 ~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp---~g~~l~~~~~~-g~~~~~ 249 (378)
+++... ...... +...+..++|+| ||++|++++.+ +.+.+|
T Consensus 293 g~~~~~--------------------------~~~~~~-~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~ 337 (365)
T 1jof_A 293 GSIEKQ--------------------------LFLSPT-PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIY 337 (365)
T ss_dssp SCEEEE--------------------------EEEEEC-SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEE
T ss_pred CCEEEe--------------------------eeeeec-CCCCcccceecCCCcCCCEEEEEEcCCCeEEEE
Confidence 432110 001111 233467789999 89888777654 444444
No 166
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.57 E-value=5.8e-12 Score=112.75 Aligned_cols=188 Identities=12% Similarity=0.064 Sum_probs=122.0
Q ss_pred eeEEEecc----ceeeeeeccc--ce--eeEEeecCCCCceEEEEcCCCCEEEEEe-CCCcEEEEeCC-CCeEEe-----
Q 046394 17 KTWRIKQE----AIAREVDILS--SR--NQYDIMLPELGPYTLDFTSSGRYMAAAG-CKGYPYFYNRD-GTELHC----- 81 (378)
Q Consensus 17 ~~~~~~~~----~~i~~~d~~~--~~--~~~~l~~~~~~v~~~~~sp~g~~l~~~~-~dg~i~iwd~~-~~~~~~----- 81 (378)
..|....+ +.+.+|++.. +. .+.....+...+..+++ ++++|++++ .++.|.+|++. ...+..
T Consensus 63 ~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~ 140 (361)
T 3scy_A 63 FVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVI 140 (361)
T ss_dssp EEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEE
T ss_pred EEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeE
Confidence 34554443 6899998865 33 33344445567778888 788888776 47899999953 222211
Q ss_pred -eccC---------CCeeEEEE------EEEEEeCCCeEEEEEcCCCc-------EE-----EE-EecCCCCeeEEEEcC
Q 046394 82 -SKEH---------GEVLKLQF------LLASINKLGQLRYQNVTMGE-------IV-----GN-FWTGLGRTDVIRVNP 132 (378)
Q Consensus 82 -~~~~---------~~~~~l~~------~l~s~~~d~~i~iwd~~~~~-------~~-----~~-~~~~~~~v~~~~~s~ 132 (378)
..+. ..+.+++| +++++..++.|.+|++.... .. .. .......+..++|+|
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~sp 220 (361)
T 3scy_A 141 EFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNS 220 (361)
T ss_dssp ECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECT
T ss_pred EccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcC
Confidence 1111 11256888 44555568999999987543 11 11 223345678999999
Q ss_pred CCCEEEEEcC-CCe-------------------eeecCCCEEEEEEecCCCEEEEEEC--CCeEEEEEcC--Cce--eee
Q 046394 133 FNGVVSLGHS-GGT-------------------MLCHQGPVSALAFHPNGHLMATSGK--DCKIKIWDLR--KYE--VLQ 186 (378)
Q Consensus 133 ~~~~l~~~~~-d~~-------------------~~~h~~~v~~~~~sp~g~~l~t~~~--d~~i~iwd~~--~~~--~~~ 186 (378)
+|+++++++. ++. ...+...+.+++|+|+|++|+++.. ++.|.+|++. ++. .+.
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~ 300 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVG 300 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEE
T ss_pred CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEee
Confidence 9998877764 444 1112234679999999999877665 4899999996 444 344
Q ss_pred ee--cCCceEEEEecCCCcccc
Q 046394 187 TL--PGHAKTLDFSRKDSGDFS 206 (378)
Q Consensus 187 ~~--~~~i~~~~~sp~g~~~~~ 206 (378)
.+ ...+..++|+|||++.+.
T Consensus 301 ~~~~g~~~~~~~~spdg~~l~~ 322 (361)
T 3scy_A 301 YQLTGIHPRNFIITPNGKYLLV 322 (361)
T ss_dssp EEECSSCCCEEEECTTSCEEEE
T ss_pred EecCCCCCceEEECCCCCEEEE
Confidence 44 347889999999986433
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.54 E-value=2.8e-12 Score=114.87 Aligned_cols=92 Identities=9% Similarity=-0.029 Sum_probs=70.7
Q ss_pred cceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeC----------CCcEEEEeC-CCCeEEeeccC-------
Q 046394 24 EAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGC----------KGYPYFYNR-DGTELHCSKEH------- 85 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~----------dg~i~iwd~-~~~~~~~~~~~------- 85 (378)
++.+.+||..+++.+..+..+.. . .++|+|||++|++++. ++.|.+||. ++..+..+...
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~-p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g 107 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFN-G-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGL 107 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEE-E-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBC
T ss_pred cCeEEEEECCCCeEEEEecCCCC-C-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccC
Confidence 56899999999998888887643 4 9999999999998863 567999995 55666666532
Q ss_pred CCeeEEEE-----EEEEEe-C-CCeEEEEEcCCCcEEEE
Q 046394 86 GEVLKLQF-----LLASIN-K-LGQLRYQNVTMGEIVGN 117 (378)
Q Consensus 86 ~~~~~l~~-----~l~s~~-~-d~~i~iwd~~~~~~~~~ 117 (378)
..+..++| +++++. . +++|.+||+.+++.+..
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 23467778 555554 3 68999999999988877
No 168
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.53 E-value=1e-11 Score=109.85 Aligned_cols=219 Identities=12% Similarity=0.073 Sum_probs=145.6
Q ss_pred EeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeec-cCC-CeeEEEE-----
Q 046394 21 IKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSK-EHG-EVLKLQF----- 93 (378)
Q Consensus 21 ~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~-~~~~l~~----- 93 (378)
+..+..++.| .+.....+..+...+.+++|+|+|++++++..++.|.+||..+..+..+. .+. .+.+++|
T Consensus 23 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~ 99 (333)
T 2dg1_A 23 IISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGR 99 (333)
T ss_dssp CCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSC
T ss_pred EeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCc
Confidence 3456666777 34556677777778899999999997778888899999997654444332 333 3588888
Q ss_pred EEEEEeCC----CeEEEEEcCCCcEEEEEe--cCCCCeeEEEEcCCCCEEEEEcCC------Ce-------------eee
Q 046394 94 LLASINKL----GQLRYQNVTMGEIVGNFW--TGLGRTDVIRVNPFNGVVSLGHSG------GT-------------MLC 148 (378)
Q Consensus 94 ~l~s~~~d----~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d------~~-------------~~~ 148 (378)
++++...+ +.|.+||..++.....+. .....+..++++|+|.++++...+ +. +..
T Consensus 100 l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 179 (333)
T 2dg1_A 100 LFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ 179 (333)
T ss_dssp EEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE
T ss_pred EEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec
Confidence 56665555 689999998877553333 234578999999999887776531 11 112
Q ss_pred cCCCEEEEEEecCCCEEE-EEECCCeEEEEEcCC-ceeee--------eec--CCceEEEEecCCCccc----------c
Q 046394 149 HQGPVSALAFHPNGHLMA-TSGKDCKIKIWDLRK-YEVLQ--------TLP--GHAKTLDFSRKDSGDF----------S 206 (378)
Q Consensus 149 h~~~v~~~~~sp~g~~l~-t~~~d~~i~iwd~~~-~~~~~--------~~~--~~i~~~~~sp~g~~~~----------~ 206 (378)
+...+..++|+|+|++|+ +.+.++.|.+||+.+ +..+. .+. ..+..++++++|.+.+ |
T Consensus 180 ~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~ 259 (333)
T 2dg1_A 180 NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVF 259 (333)
T ss_dssp EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEE
Confidence 223567899999998654 455678999999964 33221 111 3577899999887522 3
Q ss_pred CCCCCceEEEeeccCCc------ceeeeEEcCCCCeEEEecCCC
Q 046394 207 GSHNYNRYMGYSMVKGY------QIGKVSFRPYEDVLGIGHSMG 244 (378)
Q Consensus 207 ~~~~~~~~~~~~~~~~~------~v~~~~~sp~g~~l~~~~~~g 244 (378)
+. ....+..+.. +.. .+.+++|+||+..|.+++.+|
T Consensus 260 d~-~g~~~~~~~~-~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 260 NK-RGYPIGQILI-PGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp CT-TSCEEEEEEC-TTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CC-CCCEEEEEEc-CCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 32 2333344433 222 588999999987776555553
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.52 E-value=1.8e-13 Score=134.43 Aligned_cols=176 Identities=6% Similarity=-0.037 Sum_probs=118.7
Q ss_pred ccceeeeeecccceeeEEeecCCCCc-----eEEEEcCCCCEEEEEeCC---------CcEEEEeCCCCeEEeeccCCCe
Q 046394 23 QEAIAREVDILSSRNQYDIMLPELGP-----YTLDFTSSGRYMAAAGCK---------GYPYFYNRDGTELHCSKEHGEV 88 (378)
Q Consensus 23 ~~~~i~~~d~~~~~~~~~l~~~~~~v-----~~~~~sp~g~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~ 88 (378)
.++.|.+||+.+++....+.+|.... ..++|||||++|++++.+ +.+.+||..+..+..+..+.+.
T Consensus 34 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~ 113 (740)
T 4a5s_A 34 QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNN 113 (740)
T ss_dssp ETTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTT
T ss_pred cCCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCc
Confidence 38999999999999887788876432 347899999999998875 5678999877777677776654
Q ss_pred -eEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEE-ecCCCCe-----------------eEEEEcCCCCEEEEEcCCC
Q 046394 89 -LKLQF-----LLASINKLGQLRYQNVTMGEIVGNF-WTGLGRT-----------------DVIRVNPFNGVVSLGHSGG 144 (378)
Q Consensus 89 -~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~v-----------------~~~~~s~~~~~l~~~~~d~ 144 (378)
..++| .||.+ .|+.|++||+.++...+.. .++...+ ..+.|||||+.|+.++.|.
T Consensus 114 ~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~ 192 (740)
T 4a5s_A 114 TQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFND 192 (740)
T ss_dssp EEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEEC
T ss_pred ceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcc
Confidence 88889 66665 4689999999888755422 1222212 3589999999998876554
Q ss_pred e------ee------ecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCC---cee--eeee---------cCCceEEEEe
Q 046394 145 T------ML------CHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRK---YEV--LQTL---------PGHAKTLDFS 198 (378)
Q Consensus 145 ~------~~------~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~---~~~--~~~~---------~~~i~~~~~s 198 (378)
. +. .+...+..+.+.+.|.. .....|.+||+.+ +.. ...+ ...+..++||
T Consensus 193 ~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ws 268 (740)
T 4a5s_A 193 TEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV----NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWA 268 (740)
T ss_dssp TTCCEEEEEECCSTTCSSCEEEEEECCBTTSC----CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEE
T ss_pred cCCceEEEEeecCCCCCCCcceeecCCCCcCc----CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEe
Confidence 3 10 02334555666555532 1122578888877 631 1222 1236778888
Q ss_pred cCCCc
Q 046394 199 RKDSG 203 (378)
Q Consensus 199 p~g~~ 203 (378)
|||+.
T Consensus 269 pdg~~ 273 (740)
T 4a5s_A 269 TQERI 273 (740)
T ss_dssp ETTEE
T ss_pred CCCeE
Confidence 88873
No 170
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.51 E-value=3.2e-12 Score=115.60 Aligned_cols=180 Identities=11% Similarity=-0.083 Sum_probs=116.3
Q ss_pred ceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE-EeeccCCCe-e---EEEE----E-
Q 046394 25 AIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTEL-HCSKEHGEV-L---KLQF----L- 94 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~-~---~l~~----~- 94 (378)
..+.+||+.+++.......+......+.|||||++|+.++.++.|++||..+... .....+... . .+.| .
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 139 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKL 139 (396)
T ss_dssp CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEE
T ss_pred ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCcc
Confidence 4678889988875443333322333488999999999999999999999655433 333334332 1 1221 0
Q ss_pred ----------------EEE-----EeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcC-CCCEEEEEcCCC------e-
Q 046394 95 ----------------LAS-----INKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNP-FNGVVSLGHSGG------T- 145 (378)
Q Consensus 95 ----------------l~s-----~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~------~- 145 (378)
++. ...+..|.+||+.+++..... .+...+..+.|+| ++..|+..+.++ .
T Consensus 140 ~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l 218 (396)
T 3c5m_A 140 VGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARM 218 (396)
T ss_dssp EEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCC
T ss_pred ccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceE
Confidence 000 034568999999988765544 4557789999999 787666554321 1
Q ss_pred ------------eeec--CCCEEEEEEecCCCEEEEEECC-----CeEEEEEcCCceeeeee-cCCceEEEEec-CCCcc
Q 046394 146 ------------MLCH--QGPVSALAFHPNGHLMATSGKD-----CKIKIWDLRKYEVLQTL-PGHAKTLDFSR-KDSGD 204 (378)
Q Consensus 146 ------------~~~h--~~~v~~~~~sp~g~~l~t~~~d-----~~i~iwd~~~~~~~~~~-~~~i~~~~~sp-~g~~~ 204 (378)
+..+ ...+..++|+|+|++|+.++.+ +.|.+||+.+++..... ..... +.|+| ||.+.
T Consensus 219 ~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~l 297 (396)
T 3c5m_A 219 WLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSLM 297 (396)
T ss_dssp EEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSEE
T ss_pred EEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCceE
Confidence 1112 1247788999999988777654 45999999887654333 12233 89999 99865
Q ss_pred cc
Q 046394 205 FS 206 (378)
Q Consensus 205 ~~ 206 (378)
+.
T Consensus 298 ~~ 299 (396)
T 3c5m_A 298 VG 299 (396)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 171
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.50 E-value=5.7e-12 Score=113.07 Aligned_cols=219 Identities=11% Similarity=0.031 Sum_probs=133.7
Q ss_pred CCCceEEEEcCCCCEEEEEeCCCcEEEEeC--CCCeEEeec--cCCCeeEEEE-------EEEEEe-------------C
Q 046394 45 ELGPYTLDFTSSGRYMAAAGCKGYPYFYNR--DGTELHCSK--EHGEVLKLQF-------LLASIN-------------K 100 (378)
Q Consensus 45 ~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~--~~~~~~~~~--~~~~~~~l~~-------~l~s~~-------------~ 100 (378)
...+..++|+|+|++|++++.+ .|.+|+. ++....... .+..+.+++| ++++++ .
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 3468899999999999999887 8999995 455433222 1122334444 234443 6
Q ss_pred CCeEEEEEcC-CCcEEEEEe----cCCCCeeEEEEcCCCCEEEEEcC-CCe-----e------------e--ecCCCEEE
Q 046394 101 LGQLRYQNVT-MGEIVGNFW----TGLGRTDVIRVNPFNGVVSLGHS-GGT-----M------------L--CHQGPVSA 155 (378)
Q Consensus 101 d~~i~iwd~~-~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~-d~~-----~------------~--~h~~~v~~ 155 (378)
++.+.+|++. +++....+. .+...+.+++|+|+|++++++.. ++. + . .|...+..
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~ 197 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW 197 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence 8999999997 466544433 24567899999999998877643 222 1 1 12456889
Q ss_pred EEEecCCCEEEEEEC-CCeEEEEEcC--Cceee---ee---ec------C-------CceEEE-EecCCCccccCCCCCc
Q 046394 156 LAFHPNGHLMATSGK-DCKIKIWDLR--KYEVL---QT---LP------G-------HAKTLD-FSRKDSGDFSGSHNYN 212 (378)
Q Consensus 156 ~~~sp~g~~l~t~~~-d~~i~iwd~~--~~~~~---~~---~~------~-------~i~~~~-~sp~g~~~~~~~~~~~ 212 (378)
++|+|+|+++++++. ++.|.+|++. ++++. .. ++ . .+..++ |+|||++.+.......
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~ 277 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK 277 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred eEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCC
Confidence 999999999888775 7899999875 45542 12 21 1 377899 9999986433221111
Q ss_pred -----eEEEeeccCCcceee----eEEcC-CCCeEEEecC--CCeEEEEEcCCCCcccccccCCC
Q 046394 213 -----RYMGYSMVKGYQIGK----VSFRP-YEDVLGIGHS--MGVSGILIPGSGEPNFDSWVANP 265 (378)
Q Consensus 213 -----~~~~~~~~~~~~v~~----~~~sp-~g~~l~~~~~--~g~~~~~~~~s~d~~i~~w~~~~ 265 (378)
.+..+.......+.. +.... ....++..-. ||. .+++....++.+.+|+.++
T Consensus 278 ~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~-~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 278 FELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDE-WMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp TTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTT-EEEEECSSSCEEEEEEEET
T ss_pred CCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCC-EEEEEEcCCCeEEEEEEch
Confidence 344443211222332 11111 1233443332 342 3555555668999998654
No 172
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.48 E-value=4.8e-11 Score=102.52 Aligned_cols=170 Identities=12% Similarity=0.058 Sum_probs=128.1
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCC-CCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccCCC--eeEEE
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPE-LGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGE--VLKLQ 92 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~-~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~l~ 92 (378)
...+..+.++.|.+||..+++.++.+..+. ..+.++.++|+|++|+ +.++.|..||.+|+.+..+..+.. +.++.
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~ 83 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITRDGRELWNIAAPAGCEMQTAR 83 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECTTSCEEEEEECCTTCEEEEEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECCCCCEEEEEcCCCCccccccE
Confidence 334445668899999999999999999876 4789999999999888 357789999999999998887532 36666
Q ss_pred E-----EEEEEeC-CCeEEEEEcCCCcEEEEEecCC------CCeeEEEEcCCCCEEEEEcCCCe------------eee
Q 046394 93 F-----LLASINK-LGQLRYQNVTMGEIVGNFWTGL------GRTDVIRVNPFNGVVSLGHSGGT------------MLC 148 (378)
Q Consensus 93 ~-----~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~~~~~d~~------------~~~ 148 (378)
+ ++++.+. ++.|..+|. +|+.+..+.... .....+++.++|+++++...++. ...
T Consensus 84 ~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~ 162 (276)
T 3no2_A 84 ILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVK 162 (276)
T ss_dssp ECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEE
T ss_pred ECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEE
Confidence 6 6666665 778888885 788877775321 23455678888888888877766 112
Q ss_pred cCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee
Q 046394 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188 (378)
Q Consensus 149 h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~ 188 (378)
....+.++.+.++|+++++++.++.|..+|..+|+.+.++
T Consensus 163 ~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 163 LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp CSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEE
T ss_pred CCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEe
Confidence 2234566777888888888888888999998888877665
No 173
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.47 E-value=2.6e-10 Score=107.65 Aligned_cols=168 Identities=12% Similarity=0.044 Sum_probs=125.5
Q ss_pred EEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeC---CCCeEEeeccCCCeeEEEE---
Q 046394 20 RIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNR---DGTELHCSKEHGEVLKLQF--- 93 (378)
Q Consensus 20 ~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~---~~~~~~~~~~~~~~~~l~~--- 93 (378)
.-..++.|.++|..+++.+..+... ..+.++.|||||+++++++.++.|.+||. ++..+..+.....+..++|
T Consensus 172 ~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~ 250 (567)
T 1qks_A 172 TLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKM 250 (567)
T ss_dssp EETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCS
T ss_pred EeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccc
Confidence 3345789999999999998888764 56789999999999999999999999996 6667777765544433333
Q ss_pred -------EEEEEeCCCeEEEEEcCCCcEEEEEecC-----------CCCeeEEEEcCCCCEEEEEc-CCCee--------
Q 046394 94 -------LLASINKLGQLRYQNVTMGEIVGNFWTG-----------LGRTDVIRVNPFNGVVSLGH-SGGTM-------- 146 (378)
Q Consensus 94 -------~l~s~~~d~~i~iwd~~~~~~~~~~~~~-----------~~~v~~~~~s~~~~~l~~~~-~d~~~-------- 146 (378)
++++...+++|.++|..+.+.+..+... ...+..+..++++..+++.. ..|.+
T Consensus 251 ~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~ 330 (567)
T 1qks_A 251 EGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDL 330 (567)
T ss_dssp TTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCS
T ss_pred cCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCC
Confidence 4555566799999999999988877632 12577888888876554443 33330
Q ss_pred -------eecCCCEEEEEEecCCCEEEEEE-CCCeEEEEEcCCceeeeee
Q 046394 147 -------LCHQGPVSALAFHPNGHLMATSG-KDCKIKIWDLRKYEVLQTL 188 (378)
Q Consensus 147 -------~~h~~~v~~~~~sp~g~~l~t~~-~d~~i~iwd~~~~~~~~~~ 188 (378)
........++.|+|+|++|+++. .++.|.++|+.+++++..+
T Consensus 331 ~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i 380 (567)
T 1qks_A 331 NNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIE 380 (567)
T ss_dssp SEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred ccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEE
Confidence 11223456789999999987665 6789999999999887665
No 174
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.45 E-value=2.5e-11 Score=107.87 Aligned_cols=202 Identities=12% Similarity=0.000 Sum_probs=128.6
Q ss_pred cceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCC---C--cEEEEeCCCCeEEeeccCCCeeEEEE-----
Q 046394 24 EAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCK---G--YPYFYNRDGTELHCSKEHGEVLKLQF----- 93 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~d---g--~i~iwd~~~~~~~~~~~~~~~~~l~~----- 93 (378)
+..|.+||+.+++.. .+ ..+.+++|||||++||.++.+ + .|.+|+..+.....+..+..+..+.|
T Consensus 42 ~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~ 116 (347)
T 2gop_A 42 ENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSR 116 (347)
T ss_dssp EEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSS
T ss_pred cceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCCC
Confidence 567888999887643 33 468899999999999887654 3 48888866555444332222677888
Q ss_pred EEEEEeC---------------------------CCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCC--
Q 046394 94 LLASINK---------------------------LGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGG-- 144 (378)
Q Consensus 94 ~l~s~~~---------------------------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-- 144 (378)
.|+.++. ...|.+||+.+++.+..+.. . .+..++|+|+| +++++..+.
T Consensus 117 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~ 193 (347)
T 2gop_A 117 KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREII 193 (347)
T ss_dssp EEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSS
T ss_pred EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEeccccc
Confidence 5555542 25799999998887455554 3 78899999999 777775431
Q ss_pred -----e-------------eeecCCCEEEEEEecCCCEEEEEECC--------CeEEEEEcCCceeeeee---cCCceE-
Q 046394 145 -----T-------------MLCHQGPVSALAFHPNGHLMATSGKD--------CKIKIWDLRKYEVLQTL---PGHAKT- 194 (378)
Q Consensus 145 -----~-------------~~~h~~~v~~~~~sp~g~~l~t~~~d--------~~i~iwd~~~~~~~~~~---~~~i~~- 194 (378)
. +..+ ..+.+ ++|+|++|+.++.+ ..|.+|| +++..... ...+..
T Consensus 194 ~~~~~~~~l~~~d~~~~~~l~~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~ 268 (347)
T 2gop_A 194 PQYFKFWDIYIWEDGKEEKMFEK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQA 268 (347)
T ss_dssp CCSSCCEEEEEEETTEEEEEEEE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEE
T ss_pred ccccccccEEEeCCCceEEeccC-cceee--ECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCc
Confidence 1 2222 33333 39999998887754 3688888 55543333 245665
Q ss_pred EEEecCCCc----------cccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCe
Q 046394 195 LDFSRKDSG----------DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGV 245 (378)
Q Consensus 195 ~~~sp~g~~----------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~ 245 (378)
+.|+ || + .+| ...+... .... +...|.+++|+| .++++++.++.
T Consensus 269 ~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~-~~~~-~~~~v~~~~~s~--~~~~~~~~~~~ 322 (347)
T 2gop_A 269 KIKD-GK-VYFTLFEEGSVNLY-IWDGEIK-PIAK-GRHWIMGFDVDE--IVVYLKETATR 322 (347)
T ss_dssp EEET-TE-EEEEEEETTEEEEE-EESSSEE-EEEC-SSSEEEEEEESS--SEEEEEECSSS
T ss_pred cEEc-Cc-EEEEEecCCcEEEE-EcCCceE-EEec-CCCeEEeeeeeC--cEEEEEcCCCC
Confidence 8888 77 4 233 2222222 2222 345688888988 55555555443
No 175
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.45 E-value=1.3e-12 Score=128.47 Aligned_cols=192 Identities=9% Similarity=0.054 Sum_probs=124.5
Q ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEeC-CCCeEEeeccCCCe------eEEEE-----EEEEEeCC---------CeEE
Q 046394 47 GPYTLDFTSSGRYMAAAGCKGYPYFYNR-DGTELHCSKEHGEV------LKLQF-----LLASINKL---------GQLR 105 (378)
Q Consensus 47 ~v~~~~~sp~g~~l~~~~~dg~i~iwd~-~~~~~~~~~~~~~~------~~l~~-----~l~s~~~d---------~~i~ 105 (378)
...++.|+|||.+|+++ ||.|++||. ++.....+.+|... ..+.| .|+.++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 45689999999988886 899999994 56666666666521 33677 66666665 5677
Q ss_pred EEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCCE-----------------E
Q 046394 106 YQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPV-----------------S 154 (378)
Q Consensus 106 iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~v-----------------~ 154 (378)
+||+.+++.. .+..+...+..++|||||+.||.+..... ..++...+ .
T Consensus 96 ~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~ 174 (740)
T 4a5s_A 96 IYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS 174 (740)
T ss_dssp EEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred EEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCc
Confidence 9999998864 35566778999999999998888754332 11222223 2
Q ss_pred EEEEecCCCEEEEEECCCe-EEEEEcCCceeeeeecCCceEEEEecCCC------ccccCCCC---C---ceEEEeec--
Q 046394 155 ALAFHPNGHLMATSGKDCK-IKIWDLRKYEVLQTLPGHAKTLDFSRKDS------GDFSGSHN---Y---NRYMGYSM-- 219 (378)
Q Consensus 155 ~~~~sp~g~~l~t~~~d~~-i~iwd~~~~~~~~~~~~~i~~~~~sp~g~------~~~~~~~~---~---~~~~~~~~-- 219 (378)
++.|||||++||.++.|.+ +.+|++...............+.|.+.|. ..+|+..+ . ........
T Consensus 175 ~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~ 254 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS 254 (740)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH
T ss_pred ceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc
Confidence 4899999999998886654 88887642111000011233444444443 24555554 4 22222110
Q ss_pred --cCCcceeeeEEcCCCCeEEEec
Q 046394 220 --VKGYQIGKVSFRPYEDVLGIGH 241 (378)
Q Consensus 220 --~~~~~v~~~~~sp~g~~l~~~~ 241 (378)
.+...+..++|+|||+.++...
T Consensus 255 ~~~~~~~~~~~~wspdg~~~~~~~ 278 (740)
T 4a5s_A 255 MLIGDHYLCDVTWATQERISLQWL 278 (740)
T ss_dssp HHTSCEEEEEEEEEETTEEEEEEE
T ss_pred CCCCCeEEEEEEEeCCCeEEEEEe
Confidence 1556789999999998666543
No 176
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.45 E-value=1.3e-11 Score=109.09 Aligned_cols=184 Identities=11% Similarity=0.099 Sum_probs=132.1
Q ss_pred ceeeeeecccceeeEEee-cCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCC--eEEeec---------cCC-CeeEE
Q 046394 25 AIAREVDILSSRNQYDIM-LPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGT--ELHCSK---------EHG-EVLKL 91 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~-~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~--~~~~~~---------~~~-~~~~l 91 (378)
+.|.+||..+++....+. .+-..+..++++|+|+++++...++.|++||.++. .+..+. .+. .+..+
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~i 148 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDV 148 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEE
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEE
Confidence 368999998888766554 33457899999999998888888899999998776 555552 222 34788
Q ss_pred EE------EEEEEe-CCCeEEEEEcCCCcEEEEEecCC----------CCeeEEEEcCC-CCEEEEEcCCCe--------
Q 046394 92 QF------LLASIN-KLGQLRYQNVTMGEIVGNFWTGL----------GRTDVIRVNPF-NGVVSLGHSGGT-------- 145 (378)
Q Consensus 92 ~~------~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~----------~~v~~~~~s~~-~~~l~~~~~d~~-------- 145 (378)
+| ++++.+ .++.|.+|| .++..+..+.... ..+..++++|+ +.++++...++.
T Consensus 149 a~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~ 227 (329)
T 3fvz_A 149 AVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT 227 (329)
T ss_dssp EECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC
Confidence 88 666665 689999999 5777777764322 34889999999 566666555554
Q ss_pred ------e--eecCCCEEEEEEecCCCEEEEE-------ECCCeEEEEEcCCceeeeee------cCCceEEEEecCCCcc
Q 046394 146 ------M--LCHQGPVSALAFHPNGHLMATS-------GKDCKIKIWDLRKYEVLQTL------PGHAKTLDFSRKDSGD 204 (378)
Q Consensus 146 ------~--~~h~~~v~~~~~sp~g~~l~t~-------~~d~~i~iwd~~~~~~~~~~------~~~i~~~~~sp~g~~~ 204 (378)
+ ..+...+.+++|+| +..+++. +.+..|++||+.+++.+..+ ...+..++++|+|...
T Consensus 228 G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~ly 306 (329)
T 3fvz_A 228 KEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVY 306 (329)
T ss_dssp CCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEE
T ss_pred CcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEE
Confidence 1 12445688899999 4333333 33458999999999998887 1457899999999655
Q ss_pred ccCCCC
Q 046394 205 FSGSHN 210 (378)
Q Consensus 205 ~~~~~~ 210 (378)
+.+...
T Consensus 307 vad~~~ 312 (329)
T 3fvz_A 307 IGDAHT 312 (329)
T ss_dssp EEESSS
T ss_pred EEECCC
Confidence 555433
No 177
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.45 E-value=8e-11 Score=101.63 Aligned_cols=203 Identities=12% Similarity=0.050 Sum_probs=139.8
Q ss_pred eeEEE-eccceeeeeecccceeeEEeec------CCCCceEEEE-cCCCCEEEEEeC-CCcEEEEeCCCCeEEeeccCC-
Q 046394 17 KTWRI-KQEAIAREVDILSSRNQYDIML------PELGPYTLDF-TSSGRYMAAAGC-KGYPYFYNRDGTELHCSKEHG- 86 (378)
Q Consensus 17 ~~~~~-~~~~~i~~~d~~~~~~~~~l~~------~~~~v~~~~~-sp~g~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~- 86 (378)
..|.. ..++.|.+||.. +.....+.. +...+.++++ .+++.++++... ++.|.+||.++..+..+....
T Consensus 42 ~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~ 120 (286)
T 1q7f_A 42 DIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL 120 (286)
T ss_dssp CEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC
T ss_pred CEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC
Confidence 34433 456789999976 555555532 3356889999 577766665543 789999998888777664332
Q ss_pred -CeeEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEEe--cCCCCeeEEEEcCCCCEEEEEcCCCe-------------
Q 046394 87 -EVLKLQF-----LLASINKLGQLRYQNVTMGEIVGNFW--TGLGRTDVIRVNPFNGVVSLGHSGGT------------- 145 (378)
Q Consensus 87 -~~~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~------------- 145 (378)
.+.++++ ++++...++.|.+||. +++.+..+. .+...+..++++|+|.++++...++.
T Consensus 121 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~ 199 (286)
T 1q7f_A 121 QHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQ 199 (286)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEE
T ss_pred CCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEE
Confidence 3588888 7777777899999996 566666664 23456899999999997777665554
Q ss_pred ee--ecCCCEEEEEEecCCCEEEEEECCC-eEEEEEcCCceeeeeecCCceEEEEecCCCccccCCCCCceEEEeeccCC
Q 046394 146 ML--CHQGPVSALAFHPNGHLMATSGKDC-KIKIWDLRKYEVLQTLPGHAKTLDFSRKDSGDFSGSHNYNRYMGYSMVKG 222 (378)
Q Consensus 146 ~~--~h~~~v~~~~~sp~g~~l~t~~~d~-~i~iwd~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~~~~~~~~~~~ 222 (378)
+. ++...+..++++|+|+++++...++ .|.+||. +++.+..+ .. .. ..
T Consensus 200 ~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~--------------------------~~-~~-~~ 250 (286)
T 1q7f_A 200 IGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISAL--------------------------ES-KV-KH 250 (286)
T ss_dssp ESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEE--------------------------EE-SS-CC
T ss_pred EccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEE--------------------------cc-cC-CC
Confidence 11 1225688999999999888888886 9999995 34433322 00 01 12
Q ss_pred cceeeeEEcCCCCeEEEecCCCeEEEEEc
Q 046394 223 YQIGKVSFRPYEDVLGIGHSMGVSGILIP 251 (378)
Q Consensus 223 ~~v~~~~~sp~g~~l~~~~~~g~~~~~~~ 251 (378)
..+.+++|+|+|.++++ +.++.+.+|-.
T Consensus 251 ~~~~~i~~~~~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 251 AQCFDVALMDDGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp SCEEEEEEETTTEEEEE-ETTTEEEEEEC
T ss_pred CcceeEEECCCCcEEEE-CCCCeEEEEEc
Confidence 23668899999887766 45777777754
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.44 E-value=6.2e-12 Score=113.70 Aligned_cols=214 Identities=9% Similarity=-0.066 Sum_probs=133.6
Q ss_pred eeeecccceeeEEeecCCCC-----ceEEEEcCCCCEEEEEeCC---CcEEEEeCCCCeEEeeccCCC-e-eEEEE----
Q 046394 28 REVDILSSRNQYDIMLPELG-----PYTLDFTSSGRYMAAAGCK---GYPYFYNRDGTELHCSKEHGE-V-LKLQF---- 93 (378)
Q Consensus 28 ~~~d~~~~~~~~~l~~~~~~-----v~~~~~sp~g~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~-~-~~l~~---- 93 (378)
..+|..++..+..+..+... +.+++|||||++|+.+... ..|.+||..+.....+..+.. . ..+.|
T Consensus 13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg 92 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDE 92 (396)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTS
T ss_pred eeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCC
Confidence 34577888877777665443 7789999999998877543 368888976666655544433 2 33677
Q ss_pred -EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeE-------------------EEEcCCCCEEEEEc------------
Q 046394 94 -LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDV-------------------IRVNPFNGVVSLGH------------ 141 (378)
Q Consensus 94 -~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~-------------------~~~s~~~~~l~~~~------------ 141 (378)
.|+.++.++.|.+||+.+++....+..+...... +.|+|++..++.+.
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~ 172 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIK 172 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEE
Confidence 7888888889999999988876655544332222 34566665433321
Q ss_pred --C-CCe---eeecCCCEEEEEEec-CCCEEEEEECC------CeEEEEEcCCceeeeee-c---CCceEEEEecCCCcc
Q 046394 142 --S-GGT---MLCHQGPVSALAFHP-NGHLMATSGKD------CKIKIWDLRKYEVLQTL-P---GHAKTLDFSRKDSGD 204 (378)
Q Consensus 142 --~-d~~---~~~h~~~v~~~~~sp-~g~~l~t~~~d------~~i~iwd~~~~~~~~~~-~---~~i~~~~~sp~g~~~ 204 (378)
. .+. +..+...+..+.|+| +|..|+.++.+ ..|.+||+..+...... + ..+..+.|+|||.+.
T Consensus 173 ~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l 252 (396)
T 3c5m_A 173 VDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAM 252 (396)
T ss_dssp EETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCE
T ss_pred EECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEE
Confidence 1 111 445667789999999 88877776643 36888998765433222 2 146778999999864
Q ss_pred ccCCCC--C--ceEEEeeccC--------CcceeeeEEcC-CCCeEEEecC
Q 046394 205 FSGSHN--Y--NRYMGYSMVK--------GYQIGKVSFRP-YEDVLGIGHS 242 (378)
Q Consensus 205 ~~~~~~--~--~~~~~~~~~~--------~~~v~~~~~sp-~g~~l~~~~~ 242 (378)
++.... . ..+..+.... ..... +.|+| ||++|+++..
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~l~~~~~ 302 (396)
T 3c5m_A 253 AYVSYFKGQTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSLMVGDGC 302 (396)
T ss_dssp EEEEEETTTCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSEEEEEEC
T ss_pred EEEecCCCCccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCceEEEecC
Confidence 332110 1 1122221100 01122 78999 9998877543
No 179
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.44 E-value=3.5e-11 Score=106.22 Aligned_cols=152 Identities=8% Similarity=0.053 Sum_probs=107.0
Q ss_pred EeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEe-CCCcEEEEeCC-CCeEEeeccCC------CeeEEE
Q 046394 21 IKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAG-CKGYPYFYNRD-GTELHCSKEHG------EVLKLQ 92 (378)
Q Consensus 21 ~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~-~dg~i~iwd~~-~~~~~~~~~~~------~~~~l~ 92 (378)
...++.|.+||..+++.+..+.. ...+..++++|++ .|+++. .++.|.+||.. +.....+.... .+..++
T Consensus 60 ~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~ 137 (328)
T 3dsm_A 60 VNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMV 137 (328)
T ss_dssp EGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEE
T ss_pred EcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEE
Confidence 34468999999999999888864 3678999999998 455555 78999999954 44455555444 456677
Q ss_pred E----EEEEEe-CCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecCCCEEEEEEecCCCEEEE
Q 046394 93 F----LLASIN-KLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMAT 167 (378)
Q Consensus 93 ~----~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~v~~~~~sp~g~~l~t 167 (378)
+ ++++.. .++.|.++|+.+++.+..+.... ....++++|+|+++++
T Consensus 138 ~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-----------------------------~p~~i~~~~dG~l~v~ 188 (328)
T 3dsm_A 138 QYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-----------------------------QPTSLVMDKYNKMWTI 188 (328)
T ss_dssp EETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-----------------------------CBCCCEECTTSEEEEE
T ss_pred EECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-----------------------------CccceEEcCCCCEEEE
Confidence 7 444443 48899999999998887775321 1234566677665555
Q ss_pred EECC----------CeEEEEEcCCceeeeee--c--CCceEEEEecCCCc
Q 046394 168 SGKD----------CKIKIWDLRKYEVLQTL--P--GHAKTLDFSRKDSG 203 (378)
Q Consensus 168 ~~~d----------~~i~iwd~~~~~~~~~~--~--~~i~~~~~sp~g~~ 203 (378)
+..+ +.|.+||..+++....+ + ..+..++|+|++.+
T Consensus 189 ~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~ 238 (328)
T 3dsm_A 189 TDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDT 238 (328)
T ss_dssp BCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCE
T ss_pred ECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCE
Confidence 5443 67888888877776665 2 35778888887765
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.41 E-value=1.4e-10 Score=103.68 Aligned_cols=208 Identities=11% Similarity=0.012 Sum_probs=117.0
Q ss_pred cceeeeeecccceeeEEeecC------CCCceEEEEcCCCCEEEEEeC--CCcEEEEeC-CCCeEEe-eccCCCeeEEEE
Q 046394 24 EAIAREVDILSSRNQYDIMLP------ELGPYTLDFTSSGRYMAAAGC--KGYPYFYNR-DGTELHC-SKEHGEVLKLQF 93 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~------~~~v~~~~~sp~g~~l~~~~~--dg~i~iwd~-~~~~~~~-~~~~~~~~~l~~ 93 (378)
++.|.+||+.+++.+..+..+ ...+..++|+|||++|++++. ++.|.+||. ++..+.. +.. .+...+.+
T Consensus 80 ~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~~~~~v~~ 158 (361)
T 2oiz_A 80 SDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-AGCWSVIP 158 (361)
T ss_dssp EEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-TTEEEEEE
T ss_pred CCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-CCcceeEE
Confidence 567999999999888887753 346789999999999998874 578999995 4555555 432 22211222
Q ss_pred ------EEEEEeCCCeEEEEEcCC-CcEEEEEe------cCCCCeeEEEEcCCCCEEEEEcCCCe---eee---------
Q 046394 94 ------LLASINKLGQLRYQNVTM-GEIVGNFW------TGLGRTDVIRVNPFNGVVSLGHSGGT---MLC--------- 148 (378)
Q Consensus 94 ------~l~s~~~d~~i~iwd~~~-~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~d~~---~~~--------- 148 (378)
.+++.+.||.+.+|++.. ++...... ....+ ..+.++|++..++..+.++. +..
T Consensus 159 ~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~ 237 (361)
T 2oiz_A 159 QPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDG 237 (361)
T ss_dssp CTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEE
T ss_pred cCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCceecc
Confidence 566777788888888754 44431111 11111 11122333333332222222 000
Q ss_pred ----------cC----CCEEEEEEecCCCEEEEEEC-----------CCeEEEEEcCCceee--eeecCCceEEEEecCC
Q 046394 149 ----------HQ----GPVSALAFHPNGHLMATSGK-----------DCKIKIWDLRKYEVL--QTLPGHAKTLDFSRKD 201 (378)
Q Consensus 149 ----------h~----~~v~~~~~sp~g~~l~t~~~-----------d~~i~iwd~~~~~~~--~~~~~~i~~~~~sp~g 201 (378)
+. .....++|+|+++.++++.. .+.|.+||+.+++.+ ...+. +.+++|+|||
T Consensus 238 ~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg 316 (361)
T 2oiz_A 238 PWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQR 316 (361)
T ss_dssp EEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTT
T ss_pred cccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCC
Confidence 00 00112567777666554432 236777777776652 33344 7777777776
Q ss_pred Cc---------cccCCCCC--ceEEEeeccCCcceeeeEEcCCCC
Q 046394 202 SG---------DFSGSHNY--NRYMGYSMVKGYQIGKVSFRPYED 235 (378)
Q Consensus 202 ~~---------~~~~~~~~--~~~~~~~~~~~~~v~~~~~sp~g~ 235 (378)
++ .+|+..+. +.+..+.. .+.....+.++|+|.
T Consensus 317 ~~l~v~n~~~v~v~D~~t~~l~~~~~i~~-~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 317 NLMLTLDGGNVNVYDISQPEPKLLRTIEG-AAEASLQVQFHPVGG 360 (361)
T ss_dssp TEEEEECSSCEEEEECSSSSCEEEEEETT-SCSSEEEEEECCCSC
T ss_pred CEEEEeCCCeEEEEECCCCcceeeEEecc-CCCCcEEEEecCCCC
Confidence 63 34455555 55544433 455566777777764
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.39 E-value=2.2e-11 Score=118.10 Aligned_cols=180 Identities=9% Similarity=-0.015 Sum_probs=125.1
Q ss_pred cceeeeeecccceeeEEeecCCCCce---------EEEEc--CCCCE-EEEEeC-CCcEEEEeCC--C-CeEEeecc---
Q 046394 24 EAIAREVDILSSRNQYDIMLPELGPY---------TLDFT--SSGRY-MAAAGC-KGYPYFYNRD--G-TELHCSKE--- 84 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~~~v~---------~~~~s--p~g~~-l~~~~~-dg~i~iwd~~--~-~~~~~~~~--- 84 (378)
++...+|....+.....+..|...+. +..|+ |||+. |+.++. +..|++|+.. + .....+..
T Consensus 46 ~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~ 125 (662)
T 3azo_A 46 AGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSA 125 (662)
T ss_dssp TTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCC
T ss_pred CCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCcc
Confidence 56677888655555667777766665 66665 99998 776654 6678888876 4 55556655
Q ss_pred --CCCe-eEEEE-----EEEEEeCC----------CeEEEEEcCC------CcEEEEEe-cCCCCeeEEEEcCCCCEEEE
Q 046394 85 --HGEV-LKLQF-----LLASINKL----------GQLRYQNVTM------GEIVGNFW-TGLGRTDVIRVNPFNGVVSL 139 (378)
Q Consensus 85 --~~~~-~~l~~-----~l~s~~~d----------~~i~iwd~~~------~~~~~~~~-~~~~~v~~~~~s~~~~~l~~ 139 (378)
|... .+++| .|++++.+ ..|.+||+.+ +.. ..+. .+...+..++|||||+.|+.
T Consensus 126 ~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~ 204 (662)
T 3azo_A 126 VGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVW 204 (662)
T ss_dssp STTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEE
T ss_pred CCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEE
Confidence 4443 78888 67776665 5899999987 554 3444 45567888999999998887
Q ss_pred EcCC-------------------C---e----eeecCCCEEEEEEecCCCEEEEEECCC--eEEEEEcCCceeeeee--c
Q 046394 140 GHSG-------------------G---T----MLCHQGPVSALAFHPNGHLMATSGKDC--KIKIWDLRKYEVLQTL--P 189 (378)
Q Consensus 140 ~~~d-------------------~---~----~~~h~~~v~~~~~sp~g~~l~t~~~d~--~i~iwd~~~~~~~~~~--~ 189 (378)
++.+ + . ..+|...+..++|+|||+++++++.++ .|.+||+.+++..... +
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~ 284 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRRE 284 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCS
T ss_pred EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccc
Confidence 6633 2 1 223467889999999999888888888 6777777666654333 1
Q ss_pred CC---------ceEEEEecCCCcc
Q 046394 190 GH---------AKTLDFSRKDSGD 204 (378)
Q Consensus 190 ~~---------i~~~~~sp~g~~~ 204 (378)
.. +.+++|+|++.+.
T Consensus 285 ~~~~~p~w~~~~~~~~~~~~~~~~ 308 (662)
T 3azo_A 285 EEFAGPLWTPGMRWFAPLANGLIA 308 (662)
T ss_dssp SBSSCCCCSTTCCSEEECTTSCEE
T ss_pred ccccCccccccCceEeEeCCCEEE
Confidence 11 4678888887753
No 182
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.38 E-value=1.9e-11 Score=118.47 Aligned_cols=177 Identities=10% Similarity=-0.032 Sum_probs=119.8
Q ss_pred cceeeeeecc--cceeeEEeec-----CCCCceEEEEcCCCCEEEEEeCC----------CcEEEEeCCC------CeEE
Q 046394 24 EAIAREVDIL--SSRNQYDIML-----PELGPYTLDFTSSGRYMAAAGCK----------GYPYFYNRDG------TELH 80 (378)
Q Consensus 24 ~~~i~~~d~~--~~~~~~~l~~-----~~~~v~~~~~sp~g~~l~~~~~d----------g~i~iwd~~~------~~~~ 80 (378)
+..|.++++. .......+.. |...+.+++|||||+.|++++.+ ..|++||..+ ....
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 180 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR 180 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE
T ss_pred CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee
Confidence 3445555554 2034455555 55678899999999999988876 5899999776 5555
Q ss_pred eec-cCCCe-eEEEE-----EEEEEeCC--------CeEEEEEcC-CC---cEEEEEecCCCCeeEEEEcCCCCEEEEEc
Q 046394 81 CSK-EHGEV-LKLQF-----LLASINKL--------GQLRYQNVT-MG---EIVGNFWTGLGRTDVIRVNPFNGVVSLGH 141 (378)
Q Consensus 81 ~~~-~~~~~-~~l~~-----~l~s~~~d--------~~i~iwd~~-~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 141 (378)
.+. .+... ..+.| .|+.++.+ ..|.+||+. ++ +.......+...+..++|+|||++++++.
T Consensus 181 ~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~ 260 (662)
T 3azo_A 181 ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATD 260 (662)
T ss_dssp ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEEC
T ss_pred EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEEC
Confidence 665 54444 77888 66665544 479999998 57 44444444567899999999999888887
Q ss_pred CCCe---------------eee-cCCC--------EEEEEEecCCCEEEEEECCCeEEEE--EcCCceeeeee--c-CCc
Q 046394 142 SGGT---------------MLC-HQGP--------VSALAFHPNGHLMATSGKDCKIKIW--DLRKYEVLQTL--P-GHA 192 (378)
Q Consensus 142 ~d~~---------------~~~-h~~~--------v~~~~~sp~g~~l~t~~~d~~i~iw--d~~~~~~~~~~--~-~~i 192 (378)
.++. +.. +... +.+++|+|++.++++++. +.++|| |+.++. +..+ + ..+
T Consensus 261 ~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~ 338 (662)
T 3azo_A 261 RTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEW 338 (662)
T ss_dssp TTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEE
T ss_pred CCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeE
Confidence 7763 111 1111 457889999999999998 999999 655555 4555 2 334
Q ss_pred eEEEEecCCCc
Q 046394 193 KTLDFSRKDSG 203 (378)
Q Consensus 193 ~~~~~sp~g~~ 203 (378)
..+ |++++..
T Consensus 339 ~~~-~s~~~~~ 348 (662)
T 3azo_A 339 AAT-LTVSGTR 348 (662)
T ss_dssp EEE-EEEETTE
T ss_pred EEE-EecCCCE
Confidence 433 2555543
No 183
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.37 E-value=2.1e-10 Score=98.01 Aligned_cols=163 Identities=9% Similarity=-0.051 Sum_probs=92.9
Q ss_pred eeEE-E-eccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccC--CCeeEEE
Q 046394 17 KTWR-I-KQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEH--GEVLKLQ 92 (378)
Q Consensus 17 ~~~~-~-~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~~l~ 92 (378)
+.|. . ..++.|.+||..+.........+...+.+++++++|+++++.. ++.|.+||..+.....+... ..+.+++
T Consensus 36 ~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~ 114 (270)
T 1rwi_B 36 NVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLA 114 (270)
T ss_dssp CEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEE
T ss_pred CEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceE
Confidence 4444 3 4467788888766543322223335788999999998555554 88999999877665554322 3457888
Q ss_pred E-----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCCE
Q 046394 93 F-----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPV 153 (378)
Q Consensus 93 ~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~v 153 (378)
+ ++++...++.|.+|+..+.............+.+++++++|.++++...++. ...+...+
T Consensus 115 ~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p 194 (270)
T 1rwi_B 115 VDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAP 194 (270)
T ss_dssp ECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSE
T ss_pred ECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCc
Confidence 8 6666667788999976554433222122234556666666664444433332 01111345
Q ss_pred EEEEEecCCCEEEEEECCCeEEEEEcC
Q 046394 154 SALAFHPNGHLMATSGKDCKIKIWDLR 180 (378)
Q Consensus 154 ~~~~~sp~g~~l~t~~~d~~i~iwd~~ 180 (378)
.+++++|+|+++++...++.|.+||..
T Consensus 195 ~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 195 WGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp EEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred eEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 566666666555555555566666553
No 184
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.36 E-value=3.6e-09 Score=91.52 Aligned_cols=228 Identities=10% Similarity=0.017 Sum_probs=146.1
Q ss_pred CCceeeEEEec-cceeeeeecccceee-EEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeec--cC-CC
Q 046394 13 EGVEKTWRIKQ-EAIAREVDILSSRNQ-YDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSK--EH-GE 87 (378)
Q Consensus 13 ~~~~~~~~~~~-~~~i~~~d~~~~~~~-~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~--~~-~~ 87 (378)
+.....+.... ++.|..||.. +... +.+..+...+.+++++++|.++++...++.|..||..+.. ..+. .. ..
T Consensus 23 d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~-~~~~~~~~~~~ 100 (299)
T 2z2n_A 23 SDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGII-KEYTLPNPDSA 100 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE-EEEECSSTTCC
T ss_pred CCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcE-EEEeCCCcCCC
Confidence 33344554444 5788899887 4332 2223345678999999999977777668889999976543 3332 12 23
Q ss_pred eeEEEE-----EEEEEeCCCeEEEEEcCCCcEEEE-EecCCCCeeEEEEcCCCCEEEEEcCCCe---------e-----e
Q 046394 88 VLKLQF-----LLASINKLGQLRYQNVTMGEIVGN-FWTGLGRTDVIRVNPFNGVVSLGHSGGT---------M-----L 147 (378)
Q Consensus 88 ~~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~d~~---------~-----~ 147 (378)
+.++++ ++++...++.|.+||. ++..... .......+..+++++++.++++...++. + .
T Consensus 101 ~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~ 179 (299)
T 2z2n_A 101 PYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITESGDITEFKIP 179 (299)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECS
T ss_pred ceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcCCCcEEEeeCC
Confidence 477877 6666666889999998 6654432 2224467899999999988777655443 1 1
Q ss_pred ecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeee-e---cCCceEEEEecCCCccccCCCCC--------ceEE
Q 046394 148 CHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQT-L---PGHAKTLDFSRKDSGDFSGSHNY--------NRYM 215 (378)
Q Consensus 148 ~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~-~---~~~i~~~~~sp~g~~~~~~~~~~--------~~~~ 215 (378)
.+...+.+++++++|+++++...++.|.+||. ++..... + ...+.+++++++|...+.+.... ..+.
T Consensus 180 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~ 258 (299)
T 2z2n_A 180 TPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSNNIIE 258 (299)
T ss_dssp STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETTTEEE
T ss_pred CCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCCCceE
Confidence 12345789999999998777777889999999 6664332 2 25688999999987533321111 1122
Q ss_pred Eeec-cCCcceeeeEEcCCCCeEEEecCCCe
Q 046394 216 GYSM-VKGYQIGKVSFRPYEDVLGIGHSMGV 245 (378)
Q Consensus 216 ~~~~-~~~~~v~~~~~sp~g~~l~~~~~~g~ 245 (378)
.+.. .+...+.++.+ ++|.++++...+++
T Consensus 259 ~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l 288 (299)
T 2z2n_A 259 EYPIQIKSAEPHGICF-DGETIWFAMECDKI 288 (299)
T ss_dssp EEECSSSSCCEEEEEE-CSSCEEEEETTTEE
T ss_pred EEeCCCCCCccceEEe-cCCCEEEEecCCcE
Confidence 2211 12345777778 77766655554443
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.31 E-value=1.1e-10 Score=103.17 Aligned_cols=202 Identities=10% Similarity=-0.003 Sum_probs=134.0
Q ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccCCC-eeEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEEe
Q 046394 46 LGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGE-VLKLQF-----LLASINKLGQLRYQNVTMGEIVGNFW 119 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~ 119 (378)
..|.++.|+|++..++..+.++.+..| .+.....+..+.. +.+++| +++++..++.|.+||..+++......
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~ 83 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI--TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV 83 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE--ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE
T ss_pred cccceeeecCCccceeEEeecccCccc--ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee
Confidence 457788999988877777778889999 4555666665544 488888 66778888999999998888765554
Q ss_pred cCCCCeeEEEEcCCCCEEEEEcCC----Ce----------ee------ecCCCEEEEEEecCCCEEEEEEC------CCe
Q 046394 120 TGLGRTDVIRVNPFNGVVSLGHSG----GT----------ML------CHQGPVSALAFHPNGHLMATSGK------DCK 173 (378)
Q Consensus 120 ~~~~~v~~~~~s~~~~~l~~~~~d----~~----------~~------~h~~~v~~~~~sp~g~~l~t~~~------d~~ 173 (378)
.+...+.+++++|+|.++++...+ +. +. .+...+.+++++|+|+++++... .+.
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~ 163 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGG 163 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEE
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCce
Confidence 556789999999999988877655 22 11 13356889999999988877654 356
Q ss_pred EEEEEcCCceeeeee--cCCceEEEEecCCCccc-c----------CCC-CCceEEE------eeccCCcceeeeEEcCC
Q 046394 174 IKIWDLRKYEVLQTL--PGHAKTLDFSRKDSGDF-S----------GSH-NYNRYMG------YSMVKGYQIGKVSFRPY 233 (378)
Q Consensus 174 i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~~~-~----------~~~-~~~~~~~------~~~~~~~~v~~~~~sp~ 233 (378)
|..||..+++..... ...+..++|+|+|.+.. . +.. ....+.. ........+..++++++
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~ 243 (333)
T 2dg1_A 164 VYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSD 243 (333)
T ss_dssp EEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTT
T ss_pred EEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCC
Confidence 777776655443322 35678899999997422 1 111 1111100 00000124667888888
Q ss_pred CCeEEEecCCCeEEEE
Q 046394 234 EDVLGIGHSMGVSGIL 249 (378)
Q Consensus 234 g~~l~~~~~~g~~~~~ 249 (378)
|.++++...++.+.+|
T Consensus 244 G~l~v~~~~~~~v~~~ 259 (333)
T 2dg1_A 244 DNLYVAMYGQGRVLVF 259 (333)
T ss_dssp CCEEEEEETTTEEEEE
T ss_pred CCEEEEEcCCCEEEEE
Confidence 8766666555544444
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.30 E-value=3.2e-10 Score=97.37 Aligned_cols=182 Identities=7% Similarity=-0.042 Sum_probs=133.2
Q ss_pred CCCEEEEEeCCCcEEEEeC-CCCeEEeeccCC--CeeEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEEecCC-CCee
Q 046394 56 SGRYMAAAGCKGYPYFYNR-DGTELHCSKEHG--EVLKLQF-----LLASINKLGQLRYQNVTMGEIVGNFWTGL-GRTD 126 (378)
Q Consensus 56 ~g~~l~~~~~dg~i~iwd~-~~~~~~~~~~~~--~~~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~ 126 (378)
.++.|++++.++.|.+||. +|+.+..+..+. .+.++.+ +++ +.++.|..||. +++.+..+..+. ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 3578999999999999996 999999988775 3477777 555 45788999999 899999988753 4688
Q ss_pred EEEEcCCCCEEEEEcC-CCe-------------ee------ecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeee
Q 046394 127 VIRVNPFNGVVSLGHS-GGT-------------ML------CHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQ 186 (378)
Q Consensus 127 ~~~~s~~~~~l~~~~~-d~~-------------~~------~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~ 186 (378)
++.+.|+|+++++.+. ++. +. .+......+++.++|+++++.+.++.|.+||.. |+.+.
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w 159 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN 159 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEE
Confidence 8999999999988776 443 10 111233445678899999999999999999998 99998
Q ss_pred ee--cCCceEEEEecCCCcccc----------CCCCCceEEEeecc-----CCcceeeeEEcCCCCeEEEec
Q 046394 187 TL--PGHAKTLDFSRKDSGDFS----------GSHNYNRYMGYSMV-----KGYQIGKVSFRPYEDVLGIGH 241 (378)
Q Consensus 187 ~~--~~~i~~~~~sp~g~~~~~----------~~~~~~~~~~~~~~-----~~~~v~~~~~sp~g~~l~~~~ 241 (378)
++ +..+.++.+.++|.+.+. +..+++.+-.+... ....+..+...++|.++++..
T Consensus 160 ~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 160 SVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 88 456777888888876443 33334444444320 012266777888888877763
No 187
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.29 E-value=1.1e-08 Score=88.45 Aligned_cols=207 Identities=12% Similarity=0.072 Sum_probs=138.3
Q ss_pred EeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeec--cC-CCeeEEEE-----EEEEEeCCCeEEEEEcCC
Q 046394 40 DIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSK--EH-GEVLKLQF-----LLASINKLGQLRYQNVTM 111 (378)
Q Consensus 40 ~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~--~~-~~~~~l~~-----~l~s~~~d~~i~iwd~~~ 111 (378)
.+..+...+.+++++++|+.+++...++.|.+||..+. +..+. .+ ..+.++++ ++++...++.|..||..
T Consensus 9 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 9 NLTNQDTGPYGITVSDKGKVWITQHKANMISCINLDGK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK- 86 (299)
T ss_dssp ECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred cCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCCCC-eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-
Confidence 34445568999999999997776666789999997744 33332 22 23477888 66666667889999986
Q ss_pred CcEEEEEe--cCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCCEEEEEEecCCCEEEEEECCCeEE
Q 046394 112 GEIVGNFW--TGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPVSALAFHPNGHLMATSGKDCKIK 175 (378)
Q Consensus 112 ~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~ 175 (378)
++. ..+. .....+..+++++++.++++...++. ...+...+.+++++|+|+++++...++.|.
T Consensus 87 g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 165 (299)
T 2z2n_A 87 GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIG 165 (299)
T ss_dssp SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEE
Confidence 443 2332 24467889999999988877655443 111335688999999998888777788999
Q ss_pred EEEcCCceeeee-e---cCCceEEEEecCCCccccCCC---------CCceEEEeec-cCCcceeeeEEcCCCCeEEEec
Q 046394 176 IWDLRKYEVLQT-L---PGHAKTLDFSRKDSGDFSGSH---------NYNRYMGYSM-VKGYQIGKVSFRPYEDVLGIGH 241 (378)
Q Consensus 176 iwd~~~~~~~~~-~---~~~i~~~~~sp~g~~~~~~~~---------~~~~~~~~~~-~~~~~v~~~~~sp~g~~l~~~~ 241 (378)
+||. +++.... + ...+..++++++|...+.+.. +... ..+.. .+...+.++.++++|.++++..
T Consensus 166 ~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 166 RITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGEI-TEFKIPTPNARPHAITAGAGIDLWFTEW 243 (299)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCE-EEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred EEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECCCCcE-EEEECCCCCCCceeEEECCCCCEEEecc
Confidence 9999 6665443 2 245788999998875322211 2221 11211 1335688899999998777765
Q ss_pred CCCeEEEEEc
Q 046394 242 SMGVSGILIP 251 (378)
Q Consensus 242 ~~g~~~~~~~ 251 (378)
.++.+..+.+
T Consensus 244 ~~~~i~~~d~ 253 (299)
T 2z2n_A 244 GANKIGRLTS 253 (299)
T ss_dssp TTTEEEEEET
T ss_pred CCceEEEECC
Confidence 6665565654
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.25 E-value=3.8e-10 Score=110.05 Aligned_cols=195 Identities=7% Similarity=-0.121 Sum_probs=119.6
Q ss_pred CCCCceEEEEcCCCCEEEEE-----eCCCcEEEEeCCCCeEEeeccCCCe--eEEEE-----EEEEEeCCCe--------
Q 046394 44 PELGPYTLDFTSSGRYMAAA-----GCKGYPYFYNRDGTELHCSKEHGEV--LKLQF-----LLASINKLGQ-------- 103 (378)
Q Consensus 44 ~~~~v~~~~~sp~g~~l~~~-----~~dg~i~iwd~~~~~~~~~~~~~~~--~~l~~-----~l~s~~~d~~-------- 103 (378)
|...+.+++|||||++||.+ +.+..|++||+.+............ ..++| .|+.++.|..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~ 198 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDER 198 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGG
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccC
Confidence 44468899999999998844 3346899999655443201111122 57788 6777777665
Q ss_pred -----EEEEEcCCCc----EEEEEecCCCCeeEEEEcCCCCEEEEEcCCC--e---------------eeecCCCEEEEE
Q 046394 104 -----LRYQNVTMGE----IVGNFWTGLGRTDVIRVNPFNGVVSLGHSGG--T---------------MLCHQGPVSALA 157 (378)
Q Consensus 104 -----i~iwd~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~--~---------------~~~h~~~v~~~~ 157 (378)
|++|++.+++ .+.....+...+..+.|||||++|+.++.++ . +..+...+....
T Consensus 199 ~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~ 278 (695)
T 2bkl_A 199 PGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVH 278 (695)
T ss_dssp GGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEE
T ss_pred CCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEE
Confidence 9999998876 3333333446788999999999887766554 1 344555556666
Q ss_pred EecCCCEEEEEE---CCCeEEEEEcCCcee--eeee--c---CCceEEEEecCCCc----------cccCCC-CCceEEE
Q 046394 158 FHPNGHLMATSG---KDCKIKIWDLRKYEV--LQTL--P---GHAKTLDFSRKDSG----------DFSGSH-NYNRYMG 216 (378)
Q Consensus 158 ~sp~g~~l~t~~---~d~~i~iwd~~~~~~--~~~~--~---~~i~~~~~sp~g~~----------~~~~~~-~~~~~~~ 216 (378)
+ |+|.+++++. .++.|.+||+.++.. ...+ + ..+..++|+ ++.+ .+|... .+.....
T Consensus 279 ~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~ 356 (695)
T 2bkl_A 279 A-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRT 356 (695)
T ss_dssp E-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEE
T ss_pred e-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEE
Confidence 6 5666444443 257899999987653 2333 2 236667777 3332 222111 1222333
Q ss_pred eeccCCcceeeeEEcCCCCeEEEe
Q 046394 217 YSMVKGYQIGKVSFRPYEDVLGIG 240 (378)
Q Consensus 217 ~~~~~~~~v~~~~~sp~g~~l~~~ 240 (378)
+..+....|..+.++|++..|+..
T Consensus 357 l~~~~~~~v~~~~~s~d~~~l~~~ 380 (695)
T 2bkl_A 357 VQLPGVGAASNLMGLEDLDDAYYV 380 (695)
T ss_dssp CCCSSSSEECCCBSCTTCSEEEEE
T ss_pred ecCCCCeEEEEeecCCCCCEEEEE
Confidence 333124567888999999776633
No 189
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.24 E-value=7.4e-09 Score=90.31 Aligned_cols=207 Identities=12% Similarity=0.026 Sum_probs=129.5
Q ss_pred ecCCCCceEEEEcCCCCEEEE-------EeCCCcEEEEeCCCCeEEeecc-----C-CCeeEEEE-----EEEEEeCCCe
Q 046394 42 MLPELGPYTLDFTSSGRYMAA-------AGCKGYPYFYNRDGTELHCSKE-----H-GEVLKLQF-----LLASINKLGQ 103 (378)
Q Consensus 42 ~~~~~~v~~~~~sp~g~~l~~-------~~~dg~i~iwd~~~~~~~~~~~-----~-~~~~~l~~-----~l~s~~~d~~ 103 (378)
...-..+.+++|+++|.++++ +..++.|.+||........+.. + ..+.++.+ .+..++..+.
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~ 93 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLG 93 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTE
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCC
Confidence 333356789999999987777 5678899999954333333322 2 23467777 3444444557
Q ss_pred EEEEEcCCCcEEEE-EecC----CCCeeEEEEcCCCCEEEEEcCC---------------Ce------------eeecCC
Q 046394 104 LRYQNVTMGEIVGN-FWTG----LGRTDVIRVNPFNGVVSLGHSG---------------GT------------MLCHQG 151 (378)
Q Consensus 104 i~iwd~~~~~~~~~-~~~~----~~~v~~~~~s~~~~~l~~~~~d---------------~~------------~~~h~~ 151 (378)
|.+||.. ++.... .... ...+.+++++++|.++++...+ +. +..+..
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~ 172 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQ 172 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEES
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEeccCCC
Confidence 9999988 765433 2211 2357899999999988777654 22 112223
Q ss_pred CEEEEEEe----cCCCEEEE-EECCCeEEEEEcC-Ccee-----eeeec----CCceEEEEecCCCccc----------c
Q 046394 152 PVSALAFH----PNGHLMAT-SGKDCKIKIWDLR-KYEV-----LQTLP----GHAKTLDFSRKDSGDF----------S 206 (378)
Q Consensus 152 ~v~~~~~s----p~g~~l~t-~~~d~~i~iwd~~-~~~~-----~~~~~----~~i~~~~~sp~g~~~~----------~ 206 (378)
....++|+ |+|+.++. ...++.|.+||+. ++.. ...+. ..+..++++++|.+.+ +
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~ 252 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF 252 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEE
Confidence 46788999 99976544 4567899999986 4442 22222 4578899999987522 3
Q ss_pred CCCCCceEEEeeccCCcceeeeEEcCCCCeEE-EecCCCeEEEEE
Q 046394 207 GSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLG-IGHSMGVSGILI 250 (378)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~-~~~~~g~~~~~~ 250 (378)
+..+...+..+.. +...+.+++|+|+|..|. ++..++.+..+.
T Consensus 253 d~~~g~~~~~~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 253 GPDGGQPKMRIRC-PFEKPSNLHFKPQTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp CTTCBSCSEEEEC-SSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred cCCCCcEeEEEeC-CCCCceeEEECCCCCEEEEEeCCCCeEEEEe
Confidence 3332333333433 446688999999998444 444444444443
No 190
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.24 E-value=9e-10 Score=94.00 Aligned_cols=197 Identities=8% Similarity=-0.007 Sum_probs=124.5
Q ss_pred CceEEEEcCCCCEEE-EEeCCCcEEEEeCCCCeEEeecc-C-CCeeEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEE
Q 046394 47 GPYTLDFTSSGRYMA-AAGCKGYPYFYNRDGTELHCSKE-H-GEVLKLQF-----LLASINKLGQLRYQNVTMGEIVGNF 118 (378)
Q Consensus 47 ~v~~~~~sp~g~~l~-~~~~dg~i~iwd~~~~~~~~~~~-~-~~~~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~ 118 (378)
.+.+++++|+|++++ +.+.++.|.+||..+.....+.. + ..+.++++ ++++.. ++.|.+||....... .+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-EC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-ee
Confidence 788999999998666 44678899999965544433322 2 23477888 555555 889999998665433 33
Q ss_pred e-cCCCCeeEEEEcCCCCEEEEEcCCCe------------e--eecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCce
Q 046394 119 W-TGLGRTDVIRVNPFNGVVSLGHSGGT------------M--LCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYE 183 (378)
Q Consensus 119 ~-~~~~~v~~~~~s~~~~~l~~~~~d~~------------~--~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~ 183 (378)
. .....+..++++|+|.++++...++. . ......+.+++++|+|+++++...++.|.+||.....
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 2 23357889999999987777655544 1 1122356789999999988887778899999988765
Q ss_pred eeeee--c-CCceEEEEecCCCccccCCCCCceE---------EEeeccCCcceeeeEEcCCCCeEEEecCCCe
Q 046394 184 VLQTL--P-GHAKTLDFSRKDSGDFSGSHNYNRY---------MGYSMVKGYQIGKVSFRPYEDVLGIGHSMGV 245 (378)
Q Consensus 184 ~~~~~--~-~~i~~~~~sp~g~~~~~~~~~~~~~---------~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~ 245 (378)
..... . ..+..++++++|...+.+....... ......+...+.+++++|+|.++++...++.
T Consensus 183 ~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~ 256 (270)
T 1rwi_B 183 QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDR 256 (270)
T ss_dssp EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTE
T ss_pred eEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCE
Confidence 54333 2 5678999999986433322111111 1111102245777888888854444444443
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.24 E-value=3e-09 Score=92.20 Aligned_cols=178 Identities=10% Similarity=0.001 Sum_probs=121.9
Q ss_pred EEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeC-CCCeEEeeccCC-----CeeEEE
Q 046394 19 WRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNR-DGTELHCSKEHG-----EVLKLQ 92 (378)
Q Consensus 19 ~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~-~~~~~~~~~~~~-----~~~~l~ 92 (378)
+.-..++.|..||..++ ...+..+...+.+++++|+|+++++...++.|.+||. ++.......... .+.+++
T Consensus 44 ~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~ 121 (296)
T 3e5z_A 44 FSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVC 121 (296)
T ss_dssp EEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEE
T ss_pred EEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEE
Confidence 33345678999998877 5566667778999999999998777766789999996 665433322211 235677
Q ss_pred E-----EEEEE----e-------------CCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe---ee
Q 046394 93 F-----LLASI----N-------------KLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT---ML 147 (378)
Q Consensus 93 ~-----~l~s~----~-------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~---~~ 147 (378)
+ ++++. + ..+.|..++.. ++. ..+..+...++.++|+|+++.+++.+.++. +.
T Consensus 122 ~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~ 199 (296)
T 3e5z_A 122 LAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYC 199 (296)
T ss_dssp ECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEE
T ss_pred ECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEE
Confidence 7 56652 2 13456666654 443 444556677899999999998866665555 11
Q ss_pred e---------------cCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--cCCceEEEEe-cCCCc
Q 046394 148 C---------------HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLDFS-RKDSG 203 (378)
Q Consensus 148 ~---------------h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~~~i~~~~~s-p~g~~ 203 (378)
. +.+.+.+++++++|+++++. ++.|.+||.. ++.+..+ +..+++++|+ |++..
T Consensus 200 ~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~~~~~~f~~~d~~~ 270 (296)
T 3e5z_A 200 LNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQTTSNLCFGGPEGRT 270 (296)
T ss_dssp ECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSCCCEEEEESTTSCE
T ss_pred ECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCCceeEEEECCCCCE
Confidence 1 12233578999999877666 8899999986 7777766 4338999994 77764
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.23 E-value=3e-09 Score=103.99 Aligned_cols=193 Identities=10% Similarity=-0.027 Sum_probs=122.1
Q ss_pred CCceEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCeEEee-ccCCCeeEEEE-----EEEEEeCCCe-----------
Q 046394 46 LGPYTLDFTSSGRYMAAAGCKG-----YPYFYNRDGTELHCS-KEHGEVLKLQF-----LLASINKLGQ----------- 103 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~~~dg-----~i~iwd~~~~~~~~~-~~~~~~~~l~~-----~l~s~~~d~~----------- 103 (378)
..+.+++|||||++||.++.++ .|++||+.+...... ..+.....++| .|+.++.++.
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 3577999999999998776543 899999665544332 22222466888 6666666554
Q ss_pred -----EEEEEcCCCcE--EEEEec--CCCCeeEEEEcCCCCEEEEEcCCC-----e-----ee----------------e
Q 046394 104 -----LRYQNVTMGEI--VGNFWT--GLGRTDVIRVNPFNGVVSLGHSGG-----T-----ML----------------C 148 (378)
Q Consensus 104 -----i~iwd~~~~~~--~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d~-----~-----~~----------------~ 148 (378)
|++|++.+++. ...+.. +...+..+.|+|||++|+.++..+ . +. .
T Consensus 205 ~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~ 284 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID 284 (710)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred CCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC
Confidence 99999988762 233332 345578899999999888765421 1 11 1
Q ss_pred cCCCEEEEEEecCCCEEEEEECCC----eEEEEEcCCcee--eeee--c---CCceEEEEecCCCc------------cc
Q 046394 149 HQGPVSALAFHPNGHLMATSGKDC----KIKIWDLRKYEV--LQTL--P---GHAKTLDFSRKDSG------------DF 205 (378)
Q Consensus 149 h~~~v~~~~~sp~g~~l~t~~~d~----~i~iwd~~~~~~--~~~~--~---~~i~~~~~sp~g~~------------~~ 205 (378)
+...+.. .|+|+|..|+..+.++ .|.+||+.++.. ...+ + ..+..++|++++.+ .+
T Consensus 285 ~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~ 363 (710)
T 2xdw_A 285 NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQL 363 (710)
T ss_dssp SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEE
T ss_pred CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEE
Confidence 1222333 4889998887766533 699999987642 3334 2 25778888866543 22
Q ss_pred cCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEe
Q 046394 206 SGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIG 240 (378)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~ 240 (378)
++..++.....+.. +...|..+.++|++..|+..
T Consensus 364 ~~~~~g~~~~~l~~-~~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 364 HDLATGALLKIFPL-EVGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp EETTTCCEEEEECC-CSSEEEEEECCTTCSEEEEE
T ss_pred EECCCCCEEEecCC-CCceEEEEecCCCCCEEEEE
Confidence 23323344444444 45567888899988766533
No 193
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.22 E-value=6e-08 Score=83.71 Aligned_cols=222 Identities=10% Similarity=0.017 Sum_probs=140.3
Q ss_pred eeeEEEe-ccceeeeeecccceee-EEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeecc--C-CCeeE
Q 046394 16 EKTWRIK-QEAIAREVDILSSRNQ-YDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKE--H-GEVLK 90 (378)
Q Consensus 16 ~~~~~~~-~~~~i~~~d~~~~~~~-~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~--~-~~~~~ 90 (378)
...+... .++.|..||.. ++.. +.+..+...+.+++++++|.+.++...++.|.+||..+... .+.. . ..+.+
T Consensus 31 g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~-~~~~~~~~~~~~~ 108 (300)
T 2qc5_A 31 GKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFT-EYPLPQPDSGPYG 108 (300)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEE-EEECSSTTCCEEE
T ss_pred CCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCCCCeE-EecCCCCCCCCcc
Confidence 3444443 35788888877 4332 22333346789999999998777766678899999775543 3322 2 23477
Q ss_pred EEE-----EEEEEeCCCeEEEEEcCCCcEEEE-EecCCCCeeEEEEcCCCCEEEEEcCCCe------------e--eecC
Q 046394 91 LQF-----LLASINKLGQLRYQNVTMGEIVGN-FWTGLGRTDVIRVNPFNGVVSLGHSGGT------------M--LCHQ 150 (378)
Q Consensus 91 l~~-----~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~d~~------------~--~~h~ 150 (378)
+++ ++++...++.|..||.. ++.... +......+..+++++++.++++...++. + ..+.
T Consensus 109 i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~ 187 (300)
T 2qc5_A 109 ITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYPLPTNA 187 (300)
T ss_dssp EEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTT
T ss_pred ceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEeeCCCCC
Confidence 777 66666667899999987 665432 2224467899999999996666554443 1 1223
Q ss_pred CCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeee-e---cCCceEEEEecCCCccccCCCCCc--------eEEEee
Q 046394 151 GPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQT-L---PGHAKTLDFSRKDSGDFSGSHNYN--------RYMGYS 218 (378)
Q Consensus 151 ~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~-~---~~~i~~~~~sp~g~~~~~~~~~~~--------~~~~~~ 218 (378)
..+.+++++++|+++++....+.|.+||. ++..... + ...+.+++++++|...+.+..... .+..+.
T Consensus 188 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~ 266 (300)
T 2qc5_A 188 AAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITNDNTIQEYQ 266 (300)
T ss_dssp CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEE
T ss_pred CCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCCCcEEEEE
Confidence 46889999999988777777788999998 5554333 2 245788999999875332211111 111121
Q ss_pred cc-CCcceeeeEEcCCCCeEEEec
Q 046394 219 MV-KGYQIGKVSFRPYEDVLGIGH 241 (378)
Q Consensus 219 ~~-~~~~v~~~~~sp~g~~l~~~~ 241 (378)
.. ....+.++.++++|.++++..
T Consensus 267 ~~~~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 267 LQTENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp CCSTTCCCCCEEECTTSCEEEECS
T ss_pred CCccCCccceeEeCCCCCEEEEcc
Confidence 10 234467777777775444443
No 194
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.22 E-value=8.3e-10 Score=98.51 Aligned_cols=137 Identities=12% Similarity=0.124 Sum_probs=94.7
Q ss_pred eeecCCceeeEEEeccceeeeeecccce-----------eeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC-
Q 046394 9 YLEAEGVEKTWRIKQEAIAREVDILSSR-----------NQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG- 76 (378)
Q Consensus 9 ~l~~~~~~~~~~~~~~~~i~~~d~~~~~-----------~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~- 76 (378)
.|+.....+.+.......+.+|++.+.. ...... +.. |+.++| |+.+|+++ .++.|++||...
T Consensus 42 lLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl 116 (388)
T 1xip_A 42 NLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCF--HGDQVLVS-TRNALYSLDLEEL 116 (388)
T ss_dssp CEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEE--ETTEEEEE-ESSEEEEEESSST
T ss_pred EEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhh
Confidence 3444443333333333455568776554 112333 445 999999 89999999 889999999432
Q ss_pred CeEEeeccCCCe-eEEEE---EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecCCC
Q 046394 77 TELHCSKEHGEV-LKLQF---LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGP 152 (378)
Q Consensus 77 ~~~~~~~~~~~~-~~l~~---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~ 152 (378)
.....+..|... .++.+ .+++++.||.|.+||+.+++... + ...
T Consensus 117 ~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-~-------------------------------~~~ 164 (388)
T 1xip_A 117 SEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-L-------------------------------AQN 164 (388)
T ss_dssp TCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-E-------------------------------EES
T ss_pred hccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc-c-------------------------------cCC
Confidence 233334444433 66666 68888999999999998877642 1 236
Q ss_pred EEEEEEecCCCEEEEEECCCeEEEEEcCCcee
Q 046394 153 VSALAFHPNGHLMATSGKDCKIKIWDLRKYEV 184 (378)
Q Consensus 153 v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~ 184 (378)
|+|++|||+| ++.|..||++++|+...+.+
T Consensus 165 Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~ 194 (388)
T 1xip_A 165 VTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEM 194 (388)
T ss_dssp EEEEEECSSE--EEEEETTSCEEEEEEETTEE
T ss_pred ceEEEEcCCc--eEEEEcCCcEEEEcCCCccc
Confidence 8899999999 67899999999998877664
No 195
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.20 E-value=1.7e-08 Score=87.65 Aligned_cols=192 Identities=7% Similarity=-0.046 Sum_probs=125.2
Q ss_pred CCceEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEeeccCCCeeEEEE-----EEEEEeCCCeEEEEEcCCCcEEEEEe
Q 046394 46 LGPYTLDFTSSGR-YMAAAGCKGYPYFYNRDGTELHCSKEHGEVLKLQF-----LLASINKLGQLRYQNVTMGEIVGNFW 119 (378)
Q Consensus 46 ~~v~~~~~sp~g~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~ 119 (378)
.-.-+..|+|++. ++++...++.|+.||..+.....+.....+.++++ ++++ . ++.|.+||..+++......
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEe
Confidence 3455889999655 55555568899999976655555544445588888 4444 3 5679999998877543333
Q ss_pred cC----CCCeeEEEEcCCCCEEEEEcCC-----------Ce------------eeecCCCEEEEEEecCCCEE-EEEECC
Q 046394 120 TG----LGRTDVIRVNPFNGVVSLGHSG-----------GT------------MLCHQGPVSALAFHPNGHLM-ATSGKD 171 (378)
Q Consensus 120 ~~----~~~v~~~~~s~~~~~l~~~~~d-----------~~------------~~~h~~~v~~~~~sp~g~~l-~t~~~d 171 (378)
.. ...++.++++|+|.++++.... +. +..+......++|+|+++.| ++.+.+
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~ 170 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLS 170 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGG
T ss_pred cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCC
Confidence 21 2347889999999976654321 11 11222345689999999876 455567
Q ss_pred CeEEEEEc--CCcee-----eeee---cCCceEEEEecCCCc----------cccCCCCCceEEEeeccCCcceeeeEEc
Q 046394 172 CKIKIWDL--RKYEV-----LQTL---PGHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSMVKGYQIGKVSFR 231 (378)
Q Consensus 172 ~~i~iwd~--~~~~~-----~~~~---~~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~~~~~~v~~~~~s 231 (378)
+.|.+||+ .++.. +..+ ...+..++++++|.+ ..++..++..+..+.. +...+++++|.
T Consensus 171 ~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~-p~~~~t~~~f~ 249 (297)
T 3g4e_A 171 YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL-PVDKTTSCCFG 249 (297)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC-SSSBEEEEEEE
T ss_pred CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC-CCCCceEEEEe
Confidence 89999997 45543 2222 245788999999864 2334444566666655 55678999998
Q ss_pred -CCCCeEEEe
Q 046394 232 -PYEDVLGIG 240 (378)
Q Consensus 232 -p~g~~l~~~ 240 (378)
|+++.|.++
T Consensus 250 g~d~~~L~vt 259 (297)
T 3g4e_A 250 GKNYSEMYVT 259 (297)
T ss_dssp SGGGCEEEEE
T ss_pred CCCCCEEEEE
Confidence 887755433
No 196
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.20 E-value=2.9e-08 Score=88.28 Aligned_cols=225 Identities=13% Similarity=0.004 Sum_probs=145.2
Q ss_pred cceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEe----------CCCcEEEEe-CCCCeEEeeccC-------
Q 046394 24 EAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAG----------CKGYPYFYN-RDGTELHCSKEH------- 85 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~----------~dg~i~iwd-~~~~~~~~~~~~------- 85 (378)
++.|.++|..+++.+..+.....+ . +++||||+++++++ .++.|.+|| .+...+..+.-.
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~ 135 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLV 135 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccccc
Confidence 579999999999999988875443 4 99999999888775 357899999 456666665432
Q ss_pred -CCeeEEEE-----EEEEEe--CCCeEEEEEcCCCcEEEEEecCCC-------CeeEEEEcCCCCEEEEEcCC-Cee-e-
Q 046394 86 -GEVLKLQF-----LLASIN--KLGQLRYQNVTMGEIVGNFWTGLG-------RTDVIRVNPFNGVVSLGHSG-GTM-L- 147 (378)
Q Consensus 86 -~~~~~l~~-----~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~-------~v~~~~~s~~~~~l~~~~~d-~~~-~- 147 (378)
..+..+.| +++.+. .++.|.++|+.+++.+.++..... .-.-++.++||+++++.... +.. .
T Consensus 136 g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~ 215 (386)
T 3sjl_D 136 GTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEIT 215 (386)
T ss_dssp SCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEE
T ss_pred CCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEe
Confidence 13467777 444443 368999999999999888864211 11124777888877777654 431 0
Q ss_pred --ec----CCCEE-EEEEe-cCCCEEEEEECCCeEEEEEcCCce--eeeee-------------cCCceEEEEecCCCc-
Q 046394 148 --CH----QGPVS-ALAFH-PNGHLMATSGKDCKIKIWDLRKYE--VLQTL-------------PGHAKTLDFSRKDSG- 203 (378)
Q Consensus 148 --~h----~~~v~-~~~~s-p~g~~l~t~~~d~~i~iwd~~~~~--~~~~~-------------~~~i~~~~~sp~g~~- 203 (378)
.+ ..++. ...|. ++|++++ .+.+|.|.+.|+.+.. .+..+ +.....++++|++..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~l 294 (386)
T 3sjl_D 216 HTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRI 294 (386)
T ss_dssp ECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEE
T ss_pred ecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeE
Confidence 11 11221 23554 5775444 6668999999997653 22221 234455777777664
Q ss_pred -------------------cccCCCCCceEEEeeccCCcceeeeEEcCCCC-eEEEe-cCCCeEEEEEcCC
Q 046394 204 -------------------DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYED-VLGIG-HSMGVSGILIPGS 253 (378)
Q Consensus 204 -------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~-~~~g~~~~~~~~s 253 (378)
.+.+..+.+.+..+.. +..+.+|.++||++ .|.++ ..++.+.++...+
T Consensus 295 yV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v--g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 295 YLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM--GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp EEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE--EEEECEEEECSSSSCEEEEEETTTTEEEEEETTT
T ss_pred EEEeccccccccCCCCCEEEEEECCCCeEEEEEEC--CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 1234445555555543 34688999999996 55554 4467666666544
No 197
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.18 E-value=1.9e-08 Score=87.61 Aligned_cols=208 Identities=12% Similarity=0.005 Sum_probs=133.6
Q ss_pred eeeEEeecCCCCceEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEeeccCCC-eeEEEE-----EEEEEeCCCeEEEEE
Q 046394 36 RNQYDIMLPELGPYTLDFTSSGR-YMAAAGCKGYPYFYNRDGTELHCSKEHGE-VLKLQF-----LLASINKLGQLRYQN 108 (378)
Q Consensus 36 ~~~~~l~~~~~~v~~~~~sp~g~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~l~~-----~l~s~~~d~~i~iwd 108 (378)
..+..+..+.....+..|+|+|+ +++++..++.|..|+.++. ...+..+.. +..+.+ ++++...++.|.+|+
T Consensus 35 ~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 35 ARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred CceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence 34455555556678999999998 5566666889999998665 444444444 488888 555555567899999
Q ss_pred cCCCcEEEEEecC----CCCeeEEEEcCCCCEEEE----EcCC-------------Ce---eee---------cCCCEEE
Q 046394 109 VTMGEIVGNFWTG----LGRTDVIRVNPFNGVVSL----GHSG-------------GT---MLC---------HQGPVSA 155 (378)
Q Consensus 109 ~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~----~~~d-------------~~---~~~---------h~~~v~~ 155 (378)
.. ++........ ...++.++++|+|.++++ |... +. +.. .......
T Consensus 114 ~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~g 192 (305)
T 3dr2_A 114 AD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNG 192 (305)
T ss_dssp TT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEE
T ss_pred CC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCCCcc
Confidence 85 6543222111 235678999999998886 3321 11 111 2234567
Q ss_pred EEEecCCCEEEEEECC------CeEEEEEcCCceee--eee----cCCceEEEEecCCCcccc--------CCCCCceEE
Q 046394 156 LAFHPNGHLMATSGKD------CKIKIWDLRKYEVL--QTL----PGHAKTLDFSRKDSGDFS--------GSHNYNRYM 215 (378)
Q Consensus 156 ~~~sp~g~~l~t~~~d------~~i~iwd~~~~~~~--~~~----~~~i~~~~~sp~g~~~~~--------~~~~~~~~~ 215 (378)
++|+|+++.|+.+... +.|.+||+..+... ..+ ...+..++++++|.+.+. +. .+..+.
T Consensus 193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~gv~~~~~-~g~~~~ 271 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTGVCVFDS-DGQLLG 271 (305)
T ss_dssp EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSSEEEEECT-TSCEEE
T ss_pred eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCCcEEEECC-CCCEEE
Confidence 8999999987777655 78999998764421 111 345677889998884222 22 233333
Q ss_pred EeeccCCcceeeeEEcCCCCeEEEecCCCeEEE
Q 046394 216 GYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGI 248 (378)
Q Consensus 216 ~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~ 248 (378)
.+.. +. .+.+++|+|++..|.+++.++...+
T Consensus 272 ~~~~-~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 272 HIPT-PG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp EEEC-SS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred EEEC-CC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 4433 22 4788999999888887777765444
No 198
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.18 E-value=6.8e-09 Score=91.52 Aligned_cols=177 Identities=7% Similarity=-0.011 Sum_probs=125.6
Q ss_pred eeEEEe-ccceeeeeecccceeeEEeecCC-----CCceEEEEcCCCCEEEEEe--CCCcEEEEeC-CCCeEEeeccCCC
Q 046394 17 KTWRIK-QEAIAREVDILSSRNQYDIMLPE-----LGPYTLDFTSSGRYMAAAG--CKGYPYFYNR-DGTELHCSKEHGE 87 (378)
Q Consensus 17 ~~~~~~-~~~~i~~~d~~~~~~~~~l~~~~-----~~v~~~~~sp~g~~l~~~~--~dg~i~iwd~-~~~~~~~~~~~~~ 87 (378)
+.|... .++.|.+||+.+++....+.... ..+..+++ . +..|+++. .++.|.++|. ++..+..+.....
T Consensus 96 ~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~ 173 (328)
T 3dsm_A 96 KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ 173 (328)
T ss_dssp EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC
T ss_pred eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCC
Confidence 455444 57899999999998877776543 15667888 3 44555554 4889999995 4566666665545
Q ss_pred eeEEEE-----EEEEEeCC----------CeEEEEEcCCCcEEEEEecC-CCCeeEEEEcCCCCEEEEEcCCCe------
Q 046394 88 VLKLQF-----LLASINKL----------GQLRYQNVTMGEIVGNFWTG-LGRTDVIRVNPFNGVVSLGHSGGT------ 145 (378)
Q Consensus 88 ~~~l~~-----~l~s~~~d----------~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d~~------ 145 (378)
+..+.+ +++++..+ +.|.++|..+++....+... ...+..++|+|++..|+++.. ..
T Consensus 174 p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~ 252 (328)
T 3dsm_A 174 PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVE 252 (328)
T ss_dssp BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETT
T ss_pred ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECC
Confidence 567777 44554443 78999999999887777643 246899999999998887765 22
Q ss_pred ---e------eecCCCEEEEEEec-CCCEEEEE----ECCCeEEEEEcCCceeeeee--cCCceEEEE
Q 046394 146 ---M------LCHQGPVSALAFHP-NGHLMATS----GKDCKIKIWDLRKYEVLQTL--PGHAKTLDF 197 (378)
Q Consensus 146 ---~------~~h~~~v~~~~~sp-~g~~l~t~----~~d~~i~iwd~~~~~~~~~~--~~~i~~~~~ 197 (378)
+ ..+......++++| +++++++. ..++.|.+||.. ++.+.++ ......++|
T Consensus 253 t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~P~~~~~ 319 (328)
T 3dsm_A 253 ADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGIIPGAFCW 319 (328)
T ss_dssp CSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEESEEEEEE
T ss_pred CCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEeccCcceEEE
Confidence 1 11135678999999 66666776 678899999998 8888887 445556655
No 199
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.16 E-value=4.7e-09 Score=102.56 Aligned_cols=176 Identities=12% Similarity=0.116 Sum_probs=119.1
Q ss_pred eeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCc----------------EEEEeCCCCe---EEeecc--
Q 046394 26 IAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGY----------------PYFYNRDGTE---LHCSKE-- 84 (378)
Q Consensus 26 ~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~----------------i~iwd~~~~~---~~~~~~-- 84 (378)
.|++||+.+++.......+ ..+.+++|+|||+.|+.++.++. |++|++.+.. ...+..
T Consensus 152 ~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~ 230 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPD 230 (710)
T ss_dssp EEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTT
T ss_pred EEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCC
Confidence 8999999999876533222 23678999999999999988766 9999964432 222232
Q ss_pred CCCe-eEEEE-----EEEEEeC-----CCeEEEEEcCC------Cc-EEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe-
Q 046394 85 HGEV-LKLQF-----LLASINK-----LGQLRYQNVTM------GE-IVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT- 145 (378)
Q Consensus 85 ~~~~-~~l~~-----~l~s~~~-----d~~i~iwd~~~------~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~- 145 (378)
+... ..+.| .|+.++. +..|.+||+.+ +. ....+..+...+.. .|+|+|..|+..+..+.
T Consensus 231 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~ 309 (710)
T 2xdw_A 231 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSP 309 (710)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCT
T ss_pred CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCC
Confidence 3333 67777 4444432 57899999986 53 34555555555544 58888887665554321
Q ss_pred -------------------eeecCC--CEEEEEEecCCCEEEEEECCCe--EEEEEcCCceeeeee---cCCceEEEEec
Q 046394 146 -------------------MLCHQG--PVSALAFHPNGHLMATSGKDCK--IKIWDLRKYEVLQTL---PGHAKTLDFSR 199 (378)
Q Consensus 146 -------------------~~~h~~--~v~~~~~sp~g~~l~t~~~d~~--i~iwd~~~~~~~~~~---~~~i~~~~~sp 199 (378)
+..|.. .+.+++|++++.++++...|+. |.+||+.+++.+..+ .+.+..++++|
T Consensus 310 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~ 389 (710)
T 2xdw_A 310 NYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQK 389 (710)
T ss_dssp TCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCT
T ss_pred CCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCC
Confidence 223333 5778999988888888888884 667787778776666 35577788888
Q ss_pred CCCc
Q 046394 200 KDSG 203 (378)
Q Consensus 200 ~g~~ 203 (378)
++..
T Consensus 390 d~~~ 393 (710)
T 2xdw_A 390 KDTE 393 (710)
T ss_dssp TCSE
T ss_pred CCCE
Confidence 8863
No 200
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.16 E-value=2.6e-08 Score=90.05 Aligned_cols=226 Identities=12% Similarity=-0.013 Sum_probs=149.9
Q ss_pred ceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEe----------CCCcEEEEe-CCCCeEEeeccC--------
Q 046394 25 AIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAG----------CKGYPYFYN-RDGTELHCSKEH-------- 85 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~----------~dg~i~iwd-~~~~~~~~~~~~-------- 85 (378)
+.|.++|+.+++.+..+..... . .+++||||++|+++. .++.|.++| .++..+..+.-.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~-P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFL-P-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSS-C-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCC-C-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 6899999999999999987644 4 999999999888876 367899999 456666665432
Q ss_pred CCeeEEEE-----EEEEEe-C-CCeEEEEEcCCCcEEEEEecCCC-------CeeEEEEcCCCCEEEEEcCCCeeee---
Q 046394 86 GEVLKLQF-----LLASIN-K-LGQLRYQNVTMGEIVGNFWTGLG-------RTDVIRVNPFNGVVSLGHSGGTMLC--- 148 (378)
Q Consensus 86 ~~~~~l~~-----~l~s~~-~-d~~i~iwd~~~~~~~~~~~~~~~-------~v~~~~~s~~~~~l~~~~~d~~~~~--- 148 (378)
..+..+.| +++.+. . ++.|.+.|+.+++.+..+..... .-..+.++++|+++++...++....
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~ 256 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT 256 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC
T ss_pred CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee
Confidence 22356667 555544 2 68899999999999888875321 1223667788887777664443110
Q ss_pred -----cCCCE-EEEEEecCCCEEEEEECCCeEEEEEcCCcee--eeee-------------cCCceEEEEecCCCc----
Q 046394 149 -----HQGPV-SALAFHPNGHLMATSGKDCKIKIWDLRKYEV--LQTL-------------PGHAKTLDFSRKDSG---- 203 (378)
Q Consensus 149 -----h~~~v-~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~--~~~~-------------~~~i~~~~~sp~g~~---- 203 (378)
...++ ..+.|++++..++..+..+.|.+.|+..... +..+ +.....++++|+|.+
T Consensus 257 ~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa 336 (426)
T 3c75_H 257 EVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLL 336 (426)
T ss_dssp CCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEE
T ss_pred eeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEE
Confidence 01111 1346789988888778889999999865432 1111 122334788888763
Q ss_pred ----------------cccCCCCCceEEEeeccCCcceeeeEEcCCCC-eEEEec-CCCeEEEEEcCCC
Q 046394 204 ----------------DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYED-VLGIGH-SMGVSGILIPGSG 254 (378)
Q Consensus 204 ----------------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~~-~~g~~~~~~~~s~ 254 (378)
.+.+..+.+.+..+.. +.....+.|+|||+ .|+++. .++.+.++...+.
T Consensus 337 ~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v--g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 337 VDQRDEWKHKAASRFVVVLNAETGERINKIEL--GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp EEECCTTCTTSCEEEEEEEETTTCCEEEEEEE--EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred ecccccccccCCCCEEEEEECCCCeEEEEEEC--CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 1223344555555543 23578999999998 777666 4777666665443
No 201
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.16 E-value=2.9e-08 Score=87.36 Aligned_cols=189 Identities=11% Similarity=-0.053 Sum_probs=118.6
Q ss_pred ceEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEeeccCCCeeEEEE----EEEEEeCCCeEEEEEcCCCcEEEEEecC-
Q 046394 48 PYTLDFTSSGR-YMAAAGCKGYPYFYNRDGTELHCSKEHGEVLKLQF----LLASINKLGQLRYQNVTMGEIVGNFWTG- 121 (378)
Q Consensus 48 v~~~~~sp~g~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~l~~----~l~s~~~d~~i~iwd~~~~~~~~~~~~~- 121 (378)
..+.+|+|++. ++++...++.|.+||..+.....+.....+.++.| .++.++.+ .|.+||..+++........
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~~~~~~~~ 129 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAELES 129 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECSST
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEECC-CEEEEECCCCcEEEEeeCCC
Confidence 46889999755 55565568899999977666555543344577777 33334444 4999999888764333211
Q ss_pred ---CCCeeEEEEcCCCCEEEEEcCC------Ce-----------eeecCCCEEEEEEecCCCEEEEE-ECCCeEEEEEcC
Q 046394 122 ---LGRTDVIRVNPFNGVVSLGHSG------GT-----------MLCHQGPVSALAFHPNGHLMATS-GKDCKIKIWDLR 180 (378)
Q Consensus 122 ---~~~v~~~~~s~~~~~l~~~~~d------~~-----------~~~h~~~v~~~~~sp~g~~l~t~-~~d~~i~iwd~~ 180 (378)
...++.++++|+|.++++.... +. +..+......++|+|+|+.++.+ +.++.|.+||+.
T Consensus 130 ~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 130 DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 1357899999999976654321 11 11122345688999999876554 457899999986
Q ss_pred --Cc-ee-----eeee---cCCceEEEEecCCCccc----------cCCCCCceEEEeeccCCcceeeeEEc-CCCCeEE
Q 046394 181 --KY-EV-----LQTL---PGHAKTLDFSRKDSGDF----------SGSHNYNRYMGYSMVKGYQIGKVSFR-PYEDVLG 238 (378)
Q Consensus 181 --~~-~~-----~~~~---~~~i~~~~~sp~g~~~~----------~~~~~~~~~~~~~~~~~~~v~~~~~s-p~g~~l~ 238 (378)
++ .. +..+ ...+..++++++|.+.+ ++. ....+..+.. +...+++++|+ |++..|.
T Consensus 210 ~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~-~~~~~~~~af~g~d~~~L~ 287 (326)
T 2ghs_A 210 ARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV-PGKQTTCPAFIGPDASRLL 287 (326)
T ss_dssp TTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC-SCSBEEEEEEESTTSCEEE
T ss_pred cccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC-CCCCcEEEEEecCCCCEEE
Confidence 55 32 2222 23467788888886422 222 2334444444 44568888887 7776553
Q ss_pred E
Q 046394 239 I 239 (378)
Q Consensus 239 ~ 239 (378)
+
T Consensus 288 v 288 (326)
T 2ghs_A 288 V 288 (326)
T ss_dssp E
T ss_pred E
Confidence 3
No 202
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.15 E-value=2.6e-07 Score=82.68 Aligned_cols=220 Identities=12% Similarity=-0.042 Sum_probs=130.8
Q ss_pred eeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEe----------CCCcEEEEeC-CCCeEEeeccC--------C
Q 046394 26 IAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAG----------CKGYPYFYNR-DGTELHCSKEH--------G 86 (378)
Q Consensus 26 ~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~----------~dg~i~iwd~-~~~~~~~~~~~--------~ 86 (378)
.|.++|..+++.+..+... ... .+++||||++|+++. .++.|.+||. +...+..+... .
T Consensus 48 ~v~v~D~~t~~~~~~i~~g-~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGG-FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCC-CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 7899999999988777764 334 999999999999886 3678999995 45555554322 1
Q ss_pred CeeEEEE-----EEEEEe-C-CCeEEEEEcCCCcEEEE-EecCCC-------CeeEEEEcCCCCEEEEEcCCCeee----
Q 046394 87 EVLKLQF-----LLASIN-K-LGQLRYQNVTMGEIVGN-FWTGLG-------RTDVIRVNPFNGVVSLGHSGGTML---- 147 (378)
Q Consensus 87 ~~~~l~~-----~l~s~~-~-d~~i~iwd~~~~~~~~~-~~~~~~-------~v~~~~~s~~~~~l~~~~~d~~~~---- 147 (378)
.+..+.| +++.++ . ++.|.++| .+++.+.. +..... .-..+.++++|..++... .+...
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~ 203 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGL 203 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEe
Confidence 2356666 555544 3 58899999 99998877 543211 001123445555444443 33211
Q ss_pred -----ecCCC-EEEEEEecCCCEEEEEECCCeEEEEEcCCce--eeeee-------------cCCceEEEEecCCCcc--
Q 046394 148 -----CHQGP-VSALAFHPNGHLMATSGKDCKIKIWDLRKYE--VLQTL-------------PGHAKTLDFSRKDSGD-- 204 (378)
Q Consensus 148 -----~h~~~-v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~--~~~~~-------------~~~i~~~~~sp~g~~~-- 204 (378)
....+ .....+.+++..++..+.++.|.+.|+.+.. .+..+ +.....+.++|++...
T Consensus 204 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV 283 (373)
T 2mad_H 204 VGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYL 283 (373)
T ss_pred ccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEE
Confidence 00111 1224566666555555578899999997542 22222 1223346778876531
Q ss_pred ------------------ccCCCCCceEEEeeccCCcceeeeEEcCCCC-eEEEec-CCCeEEEEEc
Q 046394 205 ------------------FSGSHNYNRYMGYSMVKGYQIGKVSFRPYED-VLGIGH-SMGVSGILIP 251 (378)
Q Consensus 205 ------------------~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~~-~~g~~~~~~~ 251 (378)
+.+..+.+.+..+.. +....++.|+|||+ .|+++. .++.+.++..
T Consensus 284 ~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~--g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 284 LTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL--GHDVDAISVAQDGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred EeccCCcccccCCCCeEEEEECCCCEEEEEEEC--CCCcCeEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 123344445455543 34578999999998 565555 3555555543
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.13 E-value=9.5e-08 Score=86.76 Aligned_cols=167 Identities=12% Similarity=0.091 Sum_probs=108.5
Q ss_pred eeeEEEec-cceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCC--cEEEEeCC-CCeEEee----c-cCC
Q 046394 16 EKTWRIKQ-EAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKG--YPYFYNRD-GTELHCS----K-EHG 86 (378)
Q Consensus 16 ~~~~~~~~-~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg--~i~iwd~~-~~~~~~~----~-~~~ 86 (378)
.+.|.... ++.|+.||..++......... .... ++|+|+++.|+++..++ .|.+|+.. +.....+ . ...
T Consensus 142 g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~ 219 (409)
T 3hrp_A 142 NTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSG 219 (409)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCS
T ss_pred CCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcC
Confidence 33444433 478999999887765544442 3344 99999999999888766 78888844 3333333 2 122
Q ss_pred CeeEEEE-----EEEEEeCCCeEEEEEcCCCcEEEE----EecCCCCe--eEEEEcCCCC-EEEEEcCCCe---------
Q 046394 87 EVLKLQF-----LLASINKLGQLRYQNVTMGEIVGN----FWTGLGRT--DVIRVNPFNG-VVSLGHSGGT--------- 145 (378)
Q Consensus 87 ~~~~l~~-----~l~s~~~d~~i~iwd~~~~~~~~~----~~~~~~~v--~~~~~s~~~~-~l~~~~~d~~--------- 145 (378)
.+.++++ .|+.+..++.|..||..++..... ........ +.++|+|++. ++++-..++.
T Consensus 220 ~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~ 299 (409)
T 3hrp_A 220 KIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE 299 (409)
T ss_dssp CCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC
T ss_pred CcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC
Confidence 3467777 455567788999999987764322 11222222 3999999654 4444444443
Q ss_pred ---eeecC---------------CCEEEEEEecCCCEEEEEE-CCCeEEEEEcCCcee
Q 046394 146 ---MLCHQ---------------GPVSALAFHPNGHLMATSG-KDCKIKIWDLRKYEV 184 (378)
Q Consensus 146 ---~~~h~---------------~~v~~~~~sp~g~~l~t~~-~d~~i~iwd~~~~~~ 184 (378)
+.++. .....++++|+|+++++-+ .++.|+.||+.++..
T Consensus 300 ~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 300 CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE
Confidence 22221 3478899999999888877 788999999877764
No 204
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.11 E-value=2.1e-07 Score=87.89 Aligned_cols=186 Identities=11% Similarity=0.074 Sum_probs=124.5
Q ss_pred ceeeEEEeccceeeeeecc--cceeeEEeecCCCCceEEEEc----CCCCEEEEEeC-CCcEEEEe-CCCCeEEeecc--
Q 046394 15 VEKTWRIKQEAIAREVDIL--SSRNQYDIMLPELGPYTLDFT----SSGRYMAAAGC-KGYPYFYN-RDGTELHCSKE-- 84 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~--~~~~~~~l~~~~~~v~~~~~s----p~g~~l~~~~~-dg~i~iwd-~~~~~~~~~~~-- 84 (378)
....|....++.|.+||+. +++.+..+... ..+..++|| |||+++++++. +++|.|+| .+.+.+..+..
T Consensus 208 Gr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~ 286 (567)
T 1qks_A 208 GRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRG 286 (567)
T ss_dssp SCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCE
T ss_pred CCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccc
Confidence 3445555667899999996 88888888764 467899999 79999888766 68999999 45566655432
Q ss_pred --------CCC--eeEEEE------EEEEEeCCCeEEEEEcCCCcEE--EEEecCCCCeeEEEEcCCCCEEEEEcCC-Ce
Q 046394 85 --------HGE--VLKLQF------LLASINKLGQLRYQNVTMGEIV--GNFWTGLGRTDVIRVNPFNGVVSLGHSG-GT 145 (378)
Q Consensus 85 --------~~~--~~~l~~------~l~s~~~d~~i~iwd~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~d-~~ 145 (378)
|.. +..+.+ ++++...+|.|.++|..+...+ ..+. .......+.|+|++++|+++... +.
T Consensus 287 ~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~ 365 (567)
T 1qks_A 287 MTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNK 365 (567)
T ss_dssp ECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTE
T ss_pred cccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCe
Confidence 112 234443 5666677899999998775432 2232 33457789999999988877643 32
Q ss_pred --------------ee-----ecCCCEEEEEEecCCCE-EEEEE-CCCeEEEEEcCC-------ceeeeee--c-CCceE
Q 046394 146 --------------ML-----CHQGPVSALAFHPNGHL-MATSG-KDCKIKIWDLRK-------YEVLQTL--P-GHAKT 194 (378)
Q Consensus 146 --------------~~-----~h~~~v~~~~~sp~g~~-l~t~~-~d~~i~iwd~~~-------~~~~~~~--~-~~i~~ 194 (378)
+. .|.+.-..+ ++|++.. ++++. .+++|.++|..+ .+.+.++ . .....
T Consensus 366 V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~ 444 (567)
T 1qks_A 366 LVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLF 444 (567)
T ss_dssp EEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCC
T ss_pred EEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEE
Confidence 11 133222222 5887444 45554 468999999987 5677777 2 23345
Q ss_pred EEEecCCCc
Q 046394 195 LDFSRKDSG 203 (378)
Q Consensus 195 ~~~sp~g~~ 203 (378)
+..+|++++
T Consensus 445 i~~~p~~~~ 453 (567)
T 1qks_A 445 IKTHPNSQY 453 (567)
T ss_dssp EECCTTCSE
T ss_pred EEeCCCCCe
Confidence 778888875
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.11 E-value=2.1e-07 Score=80.23 Aligned_cols=208 Identities=9% Similarity=0.035 Sum_probs=134.2
Q ss_pred eecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEe-eccC-CCeeEEEE-----EEEEEeCCCeEEEEEcCCCc
Q 046394 41 IMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHC-SKEH-GEVLKLQF-----LLASINKLGQLRYQNVTMGE 113 (378)
Q Consensus 41 l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~-~~~~-~~~~~l~~-----~l~s~~~d~~i~iwd~~~~~ 113 (378)
+......+.+++++++|+..++...++.|.+||..+..... +... ..+.++++ ++++...++.|..||.. ++
T Consensus 15 ~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 15 LSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence 33345678999999999977777678899999976443321 2222 23477777 56665667889999987 65
Q ss_pred EEE-EEecCCCCeeEEEEcCCCCEEEEEcCCCe---------e-----eecCCCEEEEEEecCCCEEEEEECCCeEEEEE
Q 046394 114 IVG-NFWTGLGRTDVIRVNPFNGVVSLGHSGGT---------M-----LCHQGPVSALAFHPNGHLMATSGKDCKIKIWD 178 (378)
Q Consensus 114 ~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~d~~---------~-----~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd 178 (378)
... .+......+.++++++++.++++...++. + ......+.+++++|+|+++++...++.|..||
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred eEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence 532 22223467899999999988777664444 1 11235688999999999777776788999999
Q ss_pred cCCceeeee-e---cCCceEEEEecCCCccccCCCCCc--------eEEEeec-cCCcceeeeEEcCCCCeEEEecCCCe
Q 046394 179 LRKYEVLQT-L---PGHAKTLDFSRKDSGDFSGSHNYN--------RYMGYSM-VKGYQIGKVSFRPYEDVLGIGHSMGV 245 (378)
Q Consensus 179 ~~~~~~~~~-~---~~~i~~~~~sp~g~~~~~~~~~~~--------~~~~~~~-~~~~~v~~~~~sp~g~~l~~~~~~g~ 245 (378)
. +++.... + ...+..++++++|...+.+..... .+..+.. .....+.+++++++|.++++...++.
T Consensus 174 ~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 252 (300)
T 2qc5_A 174 N-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQ 252 (300)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE
T ss_pred C-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCe
Confidence 8 5554432 2 245788999998865332211111 1111111 12345778889998876666655555
Q ss_pred EEEEE
Q 046394 246 SGILI 250 (378)
Q Consensus 246 ~~~~~ 250 (378)
+..+.
T Consensus 253 i~~~~ 257 (300)
T 2qc5_A 253 IGRIT 257 (300)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 44443
No 206
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.10 E-value=9.1e-09 Score=91.15 Aligned_cols=164 Identities=7% Similarity=-0.004 Sum_probs=107.5
Q ss_pred eeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCC---------------------------CcEEEEeCCCCe
Q 046394 26 IAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCK---------------------------GYPYFYNRDGTE 78 (378)
Q Consensus 26 ~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~d---------------------------g~i~iwd~~~~~ 78 (378)
.|.+||+.+++.......+ . +.+++|+|||+.|+.++.+ ..|++||..+..
T Consensus 86 ~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 86 EIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred eEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 4778888887765544444 4 8999999999998887642 568999975554
Q ss_pred E-EeeccCCCeeEEEE----EEEEEeCC------C-eEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCC--
Q 046394 79 L-HCSKEHGEVLKLQF----LLASINKL------G-QLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGG-- 144 (378)
Q Consensus 79 ~-~~~~~~~~~~~l~~----~l~s~~~d------~-~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-- 144 (378)
. ..+... .+..+.| ++++++.+ . ...||.+.+++.. .+..+ ..+..+ +|+|+.|+.++.+.
T Consensus 164 ~~~~l~~~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~l~~~-~~~~~~--spdg~~l~~~~~~~~~ 238 (347)
T 2gop_A 164 VIEEFEKP-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKEE-KMFEK-VSFYAV--DSDGERILLYGKPEKK 238 (347)
T ss_dssp EEEEEEEE-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTEEE-EEEEE-ESEEEE--EECSSCEEEEECCSSS
T ss_pred EEeeecCC-CcccccCCCCeEEEEEecccccccccccccEEEeCCCceE-EeccC-cceeeE--CCCCCEEEEEEccccC
Confidence 4 555442 4466777 55555443 2 3344444455543 33333 444443 99999877665432
Q ss_pred ------e------------eeecCCCEEE-EEEecCCCEEEEEECCCeEEEEEcCCceeeeee--cCCceEEEEec
Q 046394 145 ------T------------MLCHQGPVSA-LAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLDFSR 199 (378)
Q Consensus 145 ------~------------~~~h~~~v~~-~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp 199 (378)
. ...|...+.. +.|+ +| ++++++.++.++|| +.+++....+ ...+.+++|+|
T Consensus 239 ~~~~~~~l~~~d~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~ 311 (347)
T 2gop_A 239 YMSEHNKLYIYDGKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE 311 (347)
T ss_dssp CCCSSCEEEEECSSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS
T ss_pred CccccceEEEECCCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC
Confidence 1 1234556775 8999 88 88999999999999 8766654433 35678888887
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.10 E-value=3.3e-08 Score=85.76 Aligned_cols=176 Identities=10% Similarity=0.018 Sum_probs=114.9
Q ss_pred ccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccC----C--CeeEEEE---
Q 046394 23 QEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEH----G--EVLKLQF--- 93 (378)
Q Consensus 23 ~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~--~~~~l~~--- 93 (378)
..+.|..||..++.. ..+. ....+.+++++|+|+++++ . ++.|.+||..+..+..+... . .++++.+
T Consensus 33 ~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~d 108 (297)
T 3g4e_A 33 PAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPA 108 (297)
T ss_dssp TTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTT
T ss_pred CCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCC
Confidence 357888899887654 2333 3467999999999995544 4 56799999765544443222 1 1366777
Q ss_pred --EEEEE-eC--------CCeEEEEEcCC-CcEEEEEecCCCCeeEEEEcCCCCEEEEE-cCCCe---e-----------
Q 046394 94 --LLASI-NK--------LGQLRYQNVTM-GEIVGNFWTGLGRTDVIRVNPFNGVVSLG-HSGGT---M----------- 146 (378)
Q Consensus 94 --~l~s~-~~--------d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~---~----------- 146 (378)
++++. +. .....+|.+.. ++... +.......+.++|+|+++.++++ +..+. +
T Consensus 109 G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~ 187 (297)
T 3g4e_A 109 GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISN 187 (297)
T ss_dssp SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEE
T ss_pred CCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccC
Confidence 44433 21 12234444432 33332 33334567899999999866544 33333 1
Q ss_pred -------eecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--c-CCceEEEEe-cCCCc
Q 046394 147 -------LCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--P-GHAKTLDFS-RKDSG 203 (378)
Q Consensus 147 -------~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~-~~i~~~~~s-p~g~~ 203 (378)
..+.+.+..++++++|++.++...++.|.+||..+++.+..+ + ..+++++|+ |++..
T Consensus 188 ~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~ 255 (297)
T 3g4e_A 188 RRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSE 255 (297)
T ss_dssp EEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCE
T ss_pred cEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCE
Confidence 012245678999999998888888889999999999988887 4 578999998 77654
No 208
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.08 E-value=1.8e-07 Score=83.82 Aligned_cols=181 Identities=9% Similarity=-0.062 Sum_probs=117.2
Q ss_pred cceeeeeecccceeeEEeecC-------CCCceEEEEcCCCCEEEEEeC--CCcEEEEeCCCC-eEEe-eccCCCeeEEE
Q 046394 24 EAIAREVDILSSRNQYDIMLP-------ELGPYTLDFTSSGRYMAAAGC--KGYPYFYNRDGT-ELHC-SKEHGEVLKLQ 92 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~-------~~~v~~~~~sp~g~~l~~~~~--dg~i~iwd~~~~-~~~~-~~~~~~~~~l~ 92 (378)
++.+.+||..+.+.+..+... ...+..++|+|||++|++++. ++.|.++| ... .+.. +.....+....
T Consensus 96 ~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~ 174 (373)
T 2mad_H 96 TDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHP 174 (373)
T ss_pred CCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEe
Confidence 578999999998887776543 234678999999999998874 47899999 654 3444 33221111111
Q ss_pred E---EEEEEeCCCeEEEEEcCCCcEEEEEe-----cCCCC-eeEEEEcCCCCEEEEEcCCCe---eee------------
Q 046394 93 F---LLASINKLGQLRYQNVTMGEIVGNFW-----TGLGR-TDVIRVNPFNGVVSLGHSGGT---MLC------------ 148 (378)
Q Consensus 93 ~---~l~s~~~d~~i~iwd~~~~~~~~~~~-----~~~~~-v~~~~~s~~~~~l~~~~~d~~---~~~------------ 148 (378)
+ .+++.+.||.+.++|. +++.+.... ....+ .....+.+++..++..+..+. +..
T Consensus 175 ~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~ 253 (373)
T 2mad_H 175 GAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPID 253 (373)
T ss_pred CCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeee
Confidence 1 5566778999999999 887764322 11111 122445555543332223222 000
Q ss_pred -----------cCCCEEEEEEecCCCEEEEEEC----------CCeEEEEEcCCceeeeee--cCCceEEEEecCCCccc
Q 046394 149 -----------HQGPVSALAFHPNGHLMATSGK----------DCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSGDF 205 (378)
Q Consensus 149 -----------h~~~v~~~~~sp~g~~l~t~~~----------d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~~~ 205 (378)
.......++++|+++.+..+.. ++.|.++|+.+++.+.++ ......+.|+|||++.+
T Consensus 254 ~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l 333 (373)
T 2mad_H 254 ALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDL 333 (373)
T ss_pred ecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEE
Confidence 1122344788999888776543 357999999999999988 56799999999998433
Q ss_pred c
Q 046394 206 S 206 (378)
Q Consensus 206 ~ 206 (378)
+
T Consensus 334 ~ 334 (373)
T 2mad_H 334 Y 334 (373)
T ss_pred E
Confidence 3
No 209
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.03 E-value=9e-08 Score=83.36 Aligned_cols=179 Identities=12% Similarity=0.093 Sum_probs=118.3
Q ss_pred eccceeeeeecccceeeEEee----cCCCCceEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEe-eccC-----CCeeE
Q 046394 22 KQEAIAREVDILSSRNQYDIM----LPELGPYTLDFTSS-GRYMAAAGCKGYPYFYNRDGTELHC-SKEH-----GEVLK 90 (378)
Q Consensus 22 ~~~~~i~~~d~~~~~~~~~l~----~~~~~v~~~~~sp~-g~~l~~~~~dg~i~iwd~~~~~~~~-~~~~-----~~~~~ 90 (378)
..++.|..||..+++...... ++...+.+++++++ |+++++ +..+.|.+||..+..... .... ..+.+
T Consensus 43 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~ 121 (314)
T 1pjx_A 43 KPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA-DMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCND 121 (314)
T ss_dssp EECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE-ETTTEEEEEETTSCEEECCSBCTTSCBCBCCCE
T ss_pred CCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE-ECCCCEEEEeCCCCEEEEEeccCCCccccCCcC
Confidence 346788899987776532211 14467899999999 764444 444479999977544332 2211 12477
Q ss_pred EEE-----EEEEEeCC---------------CeEEEEEcCCCcEEEEEecCCCCeeEEEEc----CCCCEEEEE-cCCCe
Q 046394 91 LQF-----LLASINKL---------------GQLRYQNVTMGEIVGNFWTGLGRTDVIRVN----PFNGVVSLG-HSGGT 145 (378)
Q Consensus 91 l~~-----~l~s~~~d---------------~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s----~~~~~l~~~-~~d~~ 145 (378)
+++ ++++...+ +.|..||.. ++..... ........++|+ |+++.++++ ..++.
T Consensus 122 i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~ 199 (314)
T 1pjx_A 122 CAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKK 199 (314)
T ss_dssp EEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTE
T ss_pred EEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCe
Confidence 888 55555444 567777765 5544332 233456889999 999765554 33333
Q ss_pred ---e-----------------eecC-CCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--c-CCceEEEEecCC
Q 046394 146 ---M-----------------LCHQ-GPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--P-GHAKTLDFSRKD 201 (378)
Q Consensus 146 ---~-----------------~~h~-~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~-~~i~~~~~sp~g 201 (378)
+ ..+. ..+..++++++|+++++...++.|.+||..+++.+..+ + ..+.+++|+|+|
T Consensus 200 i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg 279 (314)
T 1pjx_A 200 LWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQT 279 (314)
T ss_dssp EEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTS
T ss_pred EEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCC
Confidence 1 0111 45778999999999888888999999999877776666 3 678999999998
Q ss_pred Cc
Q 046394 202 SG 203 (378)
Q Consensus 202 ~~ 203 (378)
..
T Consensus 280 ~~ 281 (314)
T 1pjx_A 280 KT 281 (314)
T ss_dssp SE
T ss_pred CE
Confidence 73
No 210
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.00 E-value=2.6e-07 Score=83.86 Aligned_cols=160 Identities=7% Similarity=-0.049 Sum_probs=106.7
Q ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccCCCe-eEEEE-----EEEEEeCCC--eEEEEEcCCCcEEEE
Q 046394 46 LGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEV-LKLQF-----LLASINKLG--QLRYQNVTMGEIVGN 117 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~l~~-----~l~s~~~d~--~i~iwd~~~~~~~~~ 117 (378)
..+..|+|+|+|+++++...++.|++||..+..+..+...... . ++| .++++..++ .|.+|+...+.....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 3578999999998777776778999999876666554433333 5 777 666666655 899999876654444
Q ss_pred E----ecCCCCeeEEEEcCCCCEEEEEcCCCe------------ee------ecCCCE-E-EEEEecC-CCEEEEEECCC
Q 046394 118 F----WTGLGRTDVIRVNPFNGVVSLGHSGGT------------ML------CHQGPV-S-ALAFHPN-GHLMATSGKDC 172 (378)
Q Consensus 118 ~----~~~~~~v~~~~~s~~~~~l~~~~~d~~------------~~------~h~~~v-~-~~~~sp~-g~~l~t~~~d~ 172 (378)
+ ......+.+++++|++..|+++..++. +. ++...- . .++|+|+ +.++++-..++
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~ 289 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS 289 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC
Confidence 4 214467889999996555555655554 11 111111 2 8999994 66666767788
Q ss_pred eEEEEEcCCceeeeee--c----------------CCceEEEEecCCCccccCC
Q 046394 173 KIKIWDLRKYEVLQTL--P----------------GHAKTLDFSRKDSGDFSGS 208 (378)
Q Consensus 173 ~i~iwd~~~~~~~~~~--~----------------~~i~~~~~sp~g~~~~~~~ 208 (378)
.|+.||.... +..+ . ..+..++++|+|.+.+.+.
T Consensus 290 ~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~ 341 (409)
T 3hrp_A 290 SVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG 341 (409)
T ss_dssp EEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred EEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence 9999997643 2222 1 2367899999998655554
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.99 E-value=1.7e-07 Score=83.41 Aligned_cols=177 Identities=12% Similarity=0.005 Sum_probs=119.3
Q ss_pred cceeeeeecccceeeEEeecCC-------CCceEEEEcCCCCEEEEEeC--CCcEEEEeC-CCCeEEeeccCCCeeEEEE
Q 046394 24 EAIAREVDILSSRNQYDIMLPE-------LGPYTLDFTSSGRYMAAAGC--KGYPYFYNR-DGTELHCSKEHGEVLKLQF 93 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~-------~~v~~~~~sp~g~~l~~~~~--dg~i~iwd~-~~~~~~~~~~~~~~~~l~~ 93 (378)
++.|.+||..+++.+..+.... ..+..++|+|||++|+++.. ++.|.++|. ++..+..+.... . ...+
T Consensus 108 ~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g-~-~~~~ 185 (386)
T 3sjl_D 108 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD-C-YHIF 185 (386)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-E-EEEE
T ss_pred CCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC-c-ceee
Confidence 5789999999999988886532 35778999999999998864 688999994 556666664322 1 1222
Q ss_pred -----EEEEEeCCCeEEEEEcCC-CcEEEEEecC----CCCe-eEEEEc-CCCCEEEEEcCCCe---eee----------
Q 046394 94 -----LLASINKLGQLRYQNVTM-GEIVGNFWTG----LGRT-DVIRVN-PFNGVVSLGHSGGT---MLC---------- 148 (378)
Q Consensus 94 -----~l~s~~~d~~i~iwd~~~-~~~~~~~~~~----~~~v-~~~~~s-~~~~~l~~~~~d~~---~~~---------- 148 (378)
.+++.+.||.+.+.++.+ ++........ ..++ ....|. ++|++++++. ++. +..
T Consensus 186 P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~-~g~V~v~d~~~~~~~v~~~ 264 (386)
T 3sjl_D 186 PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY-TGKIHQIDLSSGDAKFLPA 264 (386)
T ss_dssp EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT-TSEEEEEECTTSSCEECCC
T ss_pred cCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeC-CCEEEEEECCCCcceeecc
Confidence 566788899999999976 5653322111 1111 123453 5665544333 343 100
Q ss_pred -------------cCCCEEEEEEecCCCEEEEEEC----------CCeEEEEEcCCceeeeee--cCCceEEEEecCCCc
Q 046394 149 -------------HQGPVSALAFHPNGHLMATSGK----------DCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSG 203 (378)
Q Consensus 149 -------------h~~~v~~~~~sp~g~~l~t~~~----------d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~ 203 (378)
..+....++++|+++.+..... .+.|.++|+.+++.+.++ ...+.++.++|||+.
T Consensus 265 ~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~ 344 (386)
T 3sjl_D 265 VEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKP 344 (386)
T ss_dssp EESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSC
T ss_pred eeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCe
Confidence 0112234778998888776542 257999999999999998 567899999999973
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.97 E-value=7.5e-08 Score=85.36 Aligned_cols=77 Identities=8% Similarity=-0.153 Sum_probs=52.5
Q ss_pred CCCCceEEEEcCCCCEEEEEeC-----CCcEEEEeCC-CCeEEeeccCC-------CeeEEEE------EEEEEe---CC
Q 046394 44 PELGPYTLDFTSSGRYMAAAGC-----KGYPYFYNRD-GTELHCSKEHG-------EVLKLQF------LLASIN---KL 101 (378)
Q Consensus 44 ~~~~v~~~~~sp~g~~l~~~~~-----dg~i~iwd~~-~~~~~~~~~~~-------~~~~l~~------~l~s~~---~d 101 (378)
|-..+.+++++++|+++++-.. ++.|.+||.. +..+..+.... .+..+++ .+++.. .+
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~ 144 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK 144 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC
Confidence 3457899999999876555433 5789999964 55565554321 1266666 445554 67
Q ss_pred CeEEEEEcCCCcEEEEEec
Q 046394 102 GQLRYQNVTMGEIVGNFWT 120 (378)
Q Consensus 102 ~~i~iwd~~~~~~~~~~~~ 120 (378)
+.|.+||+.+++....+..
T Consensus 145 ~~i~v~d~~~g~~~r~~~~ 163 (343)
T 2qe8_A 145 AALIRVDLQTGLAARVLQG 163 (343)
T ss_dssp CEEEEEETTTCCEEEECTT
T ss_pred CeEEEEECCCCCEEEEecC
Confidence 8999999998887666543
No 213
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.95 E-value=1.5e-07 Score=91.04 Aligned_cols=171 Identities=11% Similarity=0.084 Sum_probs=117.1
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCC-----------ceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeec
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELG-----------PYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSK 83 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~-----------v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~ 83 (378)
+..|....++.|..+|..+++.++.+...... ..++++ ++..|++++.|+.|..+| .+|+.+..+.
T Consensus 78 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 78 GIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp TEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeeec
Confidence 45566666789999999999999988765321 112333 356888899999999999 5888888876
Q ss_pred cC-C-----Ce-eEEE-E--EEEEEeC------CCeEEEEEcCCCcEEEEEecCCCC-----------------------
Q 046394 84 EH-G-----EV-LKLQ-F--LLASINK------LGQLRYQNVTMGEIVGNFWTGLGR----------------------- 124 (378)
Q Consensus 84 ~~-~-----~~-~~l~-~--~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~~----------------------- 124 (378)
.+ . .. .... . .++.++. ++.|..||..+|+.+..+......
T Consensus 156 ~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~ 235 (677)
T 1kb0_A 156 TFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKW 235 (677)
T ss_dssp TTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCH
T ss_pred CCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCce
Confidence 55 1 22 2222 2 4444443 799999999999998887643211
Q ss_pred ---------eeEEEEcCCCCEEEEEcCCC-------------------e--------------ee--ecC-------CCE
Q 046394 125 ---------TDVIRVNPFNGVVSLGHSGG-------------------T--------------ML--CHQ-------GPV 153 (378)
Q Consensus 125 ---------v~~~~~s~~~~~l~~~~~d~-------------------~--------------~~--~h~-------~~v 153 (378)
...++++|++..+++++.++ . +. .|. ...
T Consensus 236 ~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p 315 (677)
T 1kb0_A 236 WEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPM 315 (677)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCC
T ss_pred eEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCc
Confidence 13578899998888877653 1 11 111 112
Q ss_pred EEEEEecCC---CEEEEEECCCeEEEEEcCCceeeeee
Q 046394 154 SALAFHPNG---HLMATSGKDCKIKIWDLRKYEVLQTL 188 (378)
Q Consensus 154 ~~~~~sp~g---~~l~t~~~d~~i~iwd~~~~~~~~~~ 188 (378)
..+....+| ..++.++.+|.|+++|..+|+++..+
T Consensus 316 ~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~ 353 (677)
T 1kb0_A 316 ILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAK 353 (677)
T ss_dssp EEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred EEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccc
Confidence 223333467 67889999999999999999988665
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.94 E-value=6.2e-08 Score=95.12 Aligned_cols=192 Identities=14% Similarity=-0.021 Sum_probs=112.0
Q ss_pred CCceEEEEcCCCCEEEEEeCC-C----cEEEEeCCCCeEEeeccCCCe-eEEEE----EEEEEeCCC-------------
Q 046394 46 LGPYTLDFTSSGRYMAAAGCK-G----YPYFYNRDGTELHCSKEHGEV-LKLQF----LLASINKLG------------- 102 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~~~d-g----~i~iwd~~~~~~~~~~~~~~~-~~l~~----~l~s~~~d~------------- 102 (378)
..+.+++|||||++||.++.+ | .|++||+.+........+... ..++| .|+.++.++
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTTSEEEEEECCCC--------CCCC
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECCCEEEEEEecCcccccccccCCCC
Confidence 357799999999999887653 3 599999655443332211111 45666 444444443
Q ss_pred -eEEEEEcCCCcE--EEEEec--CCCCeeEEEEcCCCCEEEEEcCCC-----e---ee-------------ecCCCEEEE
Q 046394 103 -QLRYQNVTMGEI--VGNFWT--GLGRTDVIRVNPFNGVVSLGHSGG-----T---ML-------------CHQGPVSAL 156 (378)
Q Consensus 103 -~i~iwd~~~~~~--~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d~-----~---~~-------------~h~~~v~~~ 156 (378)
.|++|++.+++. ...+.. +...+..+.|||||++|+..+.++ . +. .+...+...
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~ 322 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF 322 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE
Confidence 489999987752 233333 223588999999999888776543 1 11 122223333
Q ss_pred EEecCCCEEEEEECC----CeEEEEEcCCce-eeeee----cCCceEEEEecCCCc----------cccCCC-CCceEEE
Q 046394 157 AFHPNGHLMATSGKD----CKIKIWDLRKYE-VLQTL----PGHAKTLDFSRKDSG----------DFSGSH-NYNRYMG 216 (378)
Q Consensus 157 ~~sp~g~~l~t~~~d----~~i~iwd~~~~~-~~~~~----~~~i~~~~~sp~g~~----------~~~~~~-~~~~~~~ 216 (378)
++|+|..|+..+.+ +.|.+||+.++. ....+ ...+..++|+ ++.+ .+|... .+.....
T Consensus 323 -~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~ 400 (741)
T 1yr2_A 323 -VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGA 400 (741)
T ss_dssp -EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEE
T ss_pred -EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceee
Confidence 45889888887764 459999998752 33333 2335556665 2222 222111 1222333
Q ss_pred eeccCCcceeeeEEcCCCCeEEE
Q 046394 217 YSMVKGYQIGKVSFRPYEDVLGI 239 (378)
Q Consensus 217 ~~~~~~~~v~~~~~sp~g~~l~~ 239 (378)
+..+....|..+.++|++..|+.
T Consensus 401 l~~~~~~~v~~~~~s~d~~~l~~ 423 (741)
T 1yr2_A 401 VSLPGIGSASGLSGRPGDRHAYL 423 (741)
T ss_dssp CBCSSSCEEEEEECCBTCSCEEE
T ss_pred ccCCCCeEEEEeecCCCCCEEEE
Confidence 33213456888899999876653
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.94 E-value=4.6e-07 Score=81.94 Aligned_cols=180 Identities=11% Similarity=-0.019 Sum_probs=121.5
Q ss_pred ccceeeeeecccceeeEEeecC-------CCCceEEEEcCCCCEEEEEeC--CCcEEEEeC-CCCeEEeeccCCCeeEEE
Q 046394 23 QEAIAREVDILSSRNQYDIMLP-------ELGPYTLDFTSSGRYMAAAGC--KGYPYFYNR-DGTELHCSKEHGEVLKLQ 92 (378)
Q Consensus 23 ~~~~i~~~d~~~~~~~~~l~~~-------~~~v~~~~~sp~g~~l~~~~~--dg~i~iwd~-~~~~~~~~~~~~~~~~l~ 92 (378)
.++.|.++|..+++.+..+... ...+..+.|+|||++|+++.. ++.|.+.|. ++..+..+..... ..+.
T Consensus 147 ~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-~~~~ 225 (426)
T 3c75_H 147 RTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-YHIF 225 (426)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEE
T ss_pred CCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-eeec
Confidence 3678999999999998887643 245778999999999999874 578999995 5555566553221 1111
Q ss_pred E----EEEEEeCCCeEEEEEcCCCcEEEEE----ecCCCCe-eEEEEcCCCCEEEEEcCCCe---eee------------
Q 046394 93 F----LLASINKLGQLRYQNVTMGEIVGNF----WTGLGRT-DVIRVNPFNGVVSLGHSGGT---MLC------------ 148 (378)
Q Consensus 93 ~----~l~s~~~d~~i~iwd~~~~~~~~~~----~~~~~~v-~~~~~s~~~~~l~~~~~d~~---~~~------------ 148 (378)
- .+++.+.||.+.+.++.+++..... .....++ ..+.|++++..++..+..+. +..
T Consensus 226 p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~ 305 (426)
T 3c75_H 226 PASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIE 305 (426)
T ss_dssp EEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEE
T ss_pred cCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeee
Confidence 1 5666778999999998666654321 1111221 23567888776655555443 110
Q ss_pred -----------cCCCEEEEEEecCCCEEEEEEC----------CCeEEEEEcCCceeeeee--cCCceEEEEecCCCc
Q 046394 149 -----------HQGPVSALAFHPNGHLMATSGK----------DCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSG 203 (378)
Q Consensus 149 -----------h~~~v~~~~~sp~g~~l~t~~~----------d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~ 203 (378)
.......++++|+++.+.+... ++.|.++|+.+++.+.++ ......+.|+|||+.
T Consensus 306 ~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~ 383 (426)
T 3c75_H 306 ALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEP 383 (426)
T ss_dssp SSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSC
T ss_pred eccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCE
Confidence 0111123789999887665532 357999999999999999 567999999999983
No 216
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.92 E-value=3.5e-08 Score=88.03 Aligned_cols=105 Identities=15% Similarity=0.031 Sum_probs=75.6
Q ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEeCC------------CCeEEeeccCCCeeEEEE---EEEEEeCCCeEEEEEcCC
Q 046394 47 GPYTLDFTSSGRYMAAAGCKGYPYFYNRD------------GTELHCSKEHGEVLKLQF---LLASINKLGQLRYQNVTM 111 (378)
Q Consensus 47 ~v~~~~~sp~g~~l~~~~~dg~i~iwd~~------------~~~~~~~~~~~~~~~l~~---~l~s~~~d~~i~iwd~~~ 111 (378)
.++.+++++...++++|+.++ +.+|+.. -....... +..++.++| .|+++ .++.|++||+.+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~V~~l~fd~~~L~v~-~~~~l~v~dv~s 115 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE-IPDVIFVCFHGDQVLVS-TRNALYSLDLEE 115 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE-CTTEEEEEEETTEEEEE-ESSEEEEEESSS
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEee-CCCeeEEEECCCEEEEE-cCCcEEEEEchh
Confidence 689999999999999999885 6679821 11212222 333888999 77777 889999999987
Q ss_pred CcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCcee
Q 046394 112 GEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEV 184 (378)
Q Consensus 112 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~ 184 (378)
........ .|...+.++.+.+. .+++++.||.|.+||+.++..
T Consensus 116 l~~~~~~~----------------------------~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~ 158 (388)
T 1xip_A 116 LSEFRTVT----------------------------SFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST 158 (388)
T ss_dssp TTCEEEEE----------------------------ECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE
T ss_pred hhccCccc----------------------------eeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc
Confidence 65444333 34455666666554 388899999999999987553
No 217
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.89 E-value=4.7e-10 Score=100.65 Aligned_cols=182 Identities=11% Similarity=-0.033 Sum_probs=101.6
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeC-CCCeEEeeccCCC--e--e
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNR-DGTELHCSKEHGE--V--L 89 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~-~~~~~~~~~~~~~--~--~ 89 (378)
.+..|....++.+..||..+++.++.+.. ..+.+..+.+++..+++++.||.|+.||. +|..+..+..+.. . .
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 34566667789999999999999999887 56666666677877888889999999995 6777666544321 0 1
Q ss_pred -EEEE--EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeee---cCCC-EE--------
Q 046394 90 -KLQF--LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLC---HQGP-VS-------- 154 (378)
Q Consensus 90 -~l~~--~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~---h~~~-v~-------- 154 (378)
.+.. .+++++.|+.|..||..+|+.+..+..+. ...++|++..+++++.++.+.. ..+. +.
T Consensus 87 p~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~ 162 (369)
T 2hz6_A 87 PCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDYA 162 (369)
T ss_dssp SCC-----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEEC
T ss_pred ceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccccc
Confidence 1112 56777888999999999999888776543 2455678888888877766111 1111 11
Q ss_pred EEEEecCC---CEEEEEECCCeEEEEEcCCceeeeee--cCCce-EEEEecCCC
Q 046394 155 ALAFHPNG---HLMATSGKDCKIKIWDLRKYEVLQTL--PGHAK-TLDFSRKDS 202 (378)
Q Consensus 155 ~~~~sp~g---~~l~t~~~d~~i~iwd~~~~~~~~~~--~~~i~-~~~~sp~g~ 202 (378)
..+++++. ..+++++.||.|..||..+|+.+..+ ..++. ...++++|.
T Consensus 163 ~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 163 ASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGL 216 (369)
T ss_dssp CBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSC
T ss_pred CccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCce
Confidence 12222221 45777889999999999999988777 34443 344556664
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.86 E-value=4.1e-07 Score=79.09 Aligned_cols=174 Identities=9% Similarity=0.021 Sum_probs=113.5
Q ss_pred ccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccC-----CCeeEEEE----
Q 046394 23 QEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEH-----GEVLKLQF---- 93 (378)
Q Consensus 23 ~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~l~~---- 93 (378)
.++.|..|+. ++. ...+..+...+.+++++++|+++++...++.|.+|+.++......... ..++++.+
T Consensus 65 ~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG 142 (305)
T 3dr2_A 65 VGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPNDLIVARDG 142 (305)
T ss_dssp TTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEETTEECSCCCCEEECTTS
T ss_pred CCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCCCCEEEEEeccCCCccCCCCCEEECCCC
Confidence 3567888887 343 344555667789999999999666655567899999776543222111 12366777
Q ss_pred -EEEE----EeC-------------CCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCC------Ce---e
Q 046394 94 -LLAS----INK-------------LGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSG------GT---M 146 (378)
Q Consensus 94 -~l~s----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------~~---~ 146 (378)
+++| +.. .+.|..||..+++..... .....+.++|+|+++.|+++... +. +
T Consensus 143 ~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~ 220 (305)
T 3dr2_A 143 AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAF 220 (305)
T ss_dssp CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEE
T ss_pred CEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEE
Confidence 5554 221 256788887667654333 33567889999999977776554 22 1
Q ss_pred ee--------------cCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--cCCceEEEEecCCCc
Q 046394 147 LC--------------HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSG 203 (378)
Q Consensus 147 ~~--------------h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~~~i~~~~~sp~g~~ 203 (378)
.. ..+....++++++|++.++. .+ .|.+||. .++.+..+ +..+.+++|+|++..
T Consensus 221 ~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~-~g~~~~~~~~~~~~~~~~f~~d~~~ 290 (305)
T 3dr2_A 221 AWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDS-DGQLLGHIPTPGTASNCTFDQAQQR 290 (305)
T ss_dssp EEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECT-TSCEEEEEECSSCCCEEEECTTSCE
T ss_pred EecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECC-CCCEEEEEECCCceeEEEEeCCCCE
Confidence 10 11223468889999855544 44 4999998 57777766 556899999987754
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.83 E-value=1.8e-07 Score=91.05 Aligned_cols=194 Identities=9% Similarity=-0.016 Sum_probs=110.3
Q ss_pred CCCCceEEEEcCCCCEEEEEeC-----CCcEEEEeCCCCeEEeeccCCC-eeEEEE----EEEEEeCC------------
Q 046394 44 PELGPYTLDFTSSGRYMAAAGC-----KGYPYFYNRDGTELHCSKEHGE-VLKLQF----LLASINKL------------ 101 (378)
Q Consensus 44 ~~~~v~~~~~sp~g~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~-~~~l~~----~l~s~~~d------------ 101 (378)
|...+.+++|||||++||.+.. ...|++||+.+........+.. ...++| .|+.++.+
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWLGNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEETTTEEEEEESSCCC-------CC
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEeCCCEEEEEEecCcccccccccCC
Confidence 4456778999999998885432 2479999965433222211111 134556 45555544
Q ss_pred -CeEEEEEcCCCcE--EEEEe--c-CCCCeeEEEEcCCCCEEEEEcCCC----e---------------eeecCCCEEEE
Q 046394 102 -GQLRYQNVTMGEI--VGNFW--T-GLGRTDVIRVNPFNGVVSLGHSGG----T---------------MLCHQGPVSAL 156 (378)
Q Consensus 102 -~~i~iwd~~~~~~--~~~~~--~-~~~~v~~~~~s~~~~~l~~~~~d~----~---------------~~~h~~~v~~~ 156 (378)
..|++|++.+++. ...+. . +...+..+.|+|||++|+.....+ . +..+.......
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~ 286 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL 286 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE
T ss_pred CcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE
Confidence 3499999987652 33332 2 334577899999999876544322 1 22233333343
Q ss_pred EEecCCCEEEEEE-CC---CeEEEEEcCCcee--eeee--c-CCceEEEEecCCCcccc-------------CCCCCceE
Q 046394 157 AFHPNGHLMATSG-KD---CKIKIWDLRKYEV--LQTL--P-GHAKTLDFSRKDSGDFS-------------GSHNYNRY 214 (378)
Q Consensus 157 ~~sp~g~~l~t~~-~d---~~i~iwd~~~~~~--~~~~--~-~~i~~~~~sp~g~~~~~-------------~~~~~~~~ 214 (378)
|+++|..|+..+ .+ +.|.++|+.++.. ...+ + ..+. .|++++.+.++ +.... ..
T Consensus 287 -~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~-~~ 362 (693)
T 3iuj_A 287 -VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK-RV 362 (693)
T ss_dssp -EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC-EE
T ss_pred -EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC-ee
Confidence 667666655444 33 5799999988654 3444 2 2232 88998875332 22211 12
Q ss_pred EEeeccCCcceeeeEEcCCCCeEEEec
Q 046394 215 MGYSMVKGYQIGKVSFRPYEDVLGIGH 241 (378)
Q Consensus 215 ~~~~~~~~~~v~~~~~sp~g~~l~~~~ 241 (378)
.....+....+..+.++|++..|+...
T Consensus 363 ~~l~~p~~~~~~~~~~~~d~~~l~~~~ 389 (693)
T 3iuj_A 363 REVALPGLGSVSGFNGKHDDPALYFGF 389 (693)
T ss_dssp EEECCSSSSEEEECCCCTTCSCEEEEE
T ss_pred EEeecCCCceEEeeecCCCCCEEEEEe
Confidence 222221234566777788887665543
No 220
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.79 E-value=2.6e-06 Score=71.70 Aligned_cols=150 Identities=10% Similarity=-0.028 Sum_probs=98.6
Q ss_pred eeeEEeecCC-CCceEEEEcCCCCEEEEEeC--CCcEEEEe-CCCCeEEeeccCCC--eeEEEE----EEEEEeCCCeEE
Q 046394 36 RNQYDIMLPE-LGPYTLDFTSSGRYMAAAGC--KGYPYFYN-RDGTELHCSKEHGE--VLKLQF----LLASINKLGQLR 105 (378)
Q Consensus 36 ~~~~~l~~~~-~~v~~~~~sp~g~~l~~~~~--dg~i~iwd-~~~~~~~~~~~~~~--~~~l~~----~l~s~~~d~~i~ 105 (378)
+.+.++.... .....+.|+|++.+.++.+. ++.|.++| .++..+..+.-... ...+++ ++++.-.++.+.
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~ 89 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGF 89 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEE
T ss_pred eEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEE
Confidence 4445554322 23579999998754444443 57899999 56777777653332 245555 556666789999
Q ss_pred EEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe----------------eeec---CCCEEEEEEecCCCEEE
Q 046394 106 YQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT----------------MLCH---QGPVSALAFHPNGHLMA 166 (378)
Q Consensus 106 iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~----------------~~~h---~~~v~~~~~sp~g~~l~ 166 (378)
++|..+.+.+.++... ......+++||..++++..++. ...+ -..++.+.|. +|..++
T Consensus 90 viD~~t~~v~~~i~~g--~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyv 166 (266)
T 2iwa_A 90 IYDRRTLSNIKNFTHQ--MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWA 166 (266)
T ss_dssp EEETTTTEEEEEEECC--SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEECCCCcEEEEEECC--CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEE
Confidence 9999999999998754 1123446668877777665444 1111 1135567777 776666
Q ss_pred EEECCCeEEEEEcCCceeeeee
Q 046394 167 TSGKDCKIKIWDLRKYEVLQTL 188 (378)
Q Consensus 167 t~~~d~~i~iwd~~~~~~~~~~ 188 (378)
....++.|.+.|..+++.+..+
T Consensus 167 n~~~~~~V~vID~~tg~V~~~I 188 (266)
T 2iwa_A 167 NIWQTDCIARISAKDGTLLGWI 188 (266)
T ss_dssp EETTSSEEEEEETTTCCEEEEE
T ss_pred ecCCCCeEEEEECCCCcEEEEE
Confidence 6667889999999998887765
No 221
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.79 E-value=2.2e-06 Score=76.99 Aligned_cols=179 Identities=10% Similarity=0.027 Sum_probs=118.9
Q ss_pred cceeeeeecccc----eeeEEee-------cCCCCceEEEEcCCCCEEEEEeCC------CcEEEEe-CCCCeEEeeccC
Q 046394 24 EAIAREVDILSS----RNQYDIM-------LPELGPYTLDFTSSGRYMAAAGCK------GYPYFYN-RDGTELHCSKEH 85 (378)
Q Consensus 24 ~~~i~~~d~~~~----~~~~~l~-------~~~~~v~~~~~sp~g~~l~~~~~d------g~i~iwd-~~~~~~~~~~~~ 85 (378)
++.|.++|+.+. +....+. .....+..+..+|+| .++++..+ |.|.++| .+.+.+..+...
T Consensus 105 s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~ 183 (462)
T 2ece_A 105 SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEID 183 (462)
T ss_dssp TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSB
T ss_pred CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccC
Confidence 588999998755 4444442 111245678899999 66666555 7899999 456777777533
Q ss_pred CC---e-eEEEE-----EEEEEe-------------------CCCeEEEEEcCCCcEEEEEecCC--CCeeEEEE--cCC
Q 046394 86 GE---V-LKLQF-----LLASIN-------------------KLGQLRYQNVTMGEIVGNFWTGL--GRTDVIRV--NPF 133 (378)
Q Consensus 86 ~~---~-~~l~~-----~l~s~~-------------------~d~~i~iwd~~~~~~~~~~~~~~--~~v~~~~~--s~~ 133 (378)
.. . ..+.| .++++. .+.+|.+||+.+++.+.++.... .....+.| +|+
T Consensus 184 ~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pd 263 (462)
T 2ece_A 184 RGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPT 263 (462)
T ss_dssp CTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTT
T ss_pred CCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCC
Confidence 22 2 44555 566653 37899999999998888887642 23445655 999
Q ss_pred CCEEEEEcC-----CCe-e------------------ee--c--------------CCCEEEEEEecCCCEEEEEE-CCC
Q 046394 134 NGVVSLGHS-----GGT-M------------------LC--H--------------QGPVSALAFHPNGHLMATSG-KDC 172 (378)
Q Consensus 134 ~~~l~~~~~-----d~~-~------------------~~--h--------------~~~v~~~~~sp~g~~l~t~~-~d~ 172 (378)
++++++++. ... + .. . ......|.+||||++|.++. ..+
T Consensus 264 g~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d 343 (462)
T 2ece_A 264 KLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIG 343 (462)
T ss_dssp CCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTT
T ss_pred CCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCC
Confidence 998888776 332 1 00 0 23467899999999987666 467
Q ss_pred eEEEEEcCC---ceeeeee--cC---------------CceEEEEecCCCc
Q 046394 173 KIKIWDLRK---YEVLQTL--PG---------------HAKTLDFSRKDSG 203 (378)
Q Consensus 173 ~i~iwd~~~---~~~~~~~--~~---------------~i~~~~~sp~g~~ 203 (378)
.|.+||+.. .+++..+ .+ ....+.+||||++
T Consensus 344 ~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~ 394 (462)
T 2ece_A 344 EVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRR 394 (462)
T ss_dssp EEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSE
T ss_pred EEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCE
Confidence 999999863 3445554 21 2466777777765
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.78 E-value=5.2e-06 Score=72.83 Aligned_cols=173 Identities=13% Similarity=0.103 Sum_probs=110.4
Q ss_pred ccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccC----C--CeeEEEE---
Q 046394 23 QEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEH----G--EVLKLQF--- 93 (378)
Q Consensus 23 ~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~--~~~~l~~--- 93 (378)
..+.|..||..+++.. .+.. ...+.+++|+|+|+++++. .+ .|.+||..+..+..+... . .+.++.+
T Consensus 69 ~~~~i~~~d~~~~~~~-~~~~-~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~ 144 (326)
T 2ghs_A 69 LERELHELHLASGRKT-VHAL-PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPS 144 (326)
T ss_dssp GGTEEEEEETTTTEEE-EEEC-SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTT
T ss_pred CCCEEEEEECCCCcEE-EEEC-CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCC
Confidence 3577888888776543 2332 4679999999999876654 44 499999654444333221 1 1367777
Q ss_pred --EEEEEeC------CCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEc-CCCe---ee-----e--------
Q 046394 94 --LLASINK------LGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGH-SGGT---ML-----C-------- 148 (378)
Q Consensus 94 --~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~---~~-----~-------- 148 (378)
++++... .+.|..++ +++... +.......+.++|+|+++.++++. .++. +. +
T Consensus 145 G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~ 221 (326)
T 2ghs_A 145 GALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEV 221 (326)
T ss_dssp SCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEE
T ss_pred CCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceE
Confidence 4443322 24566666 555433 322334578899999998665543 2232 11 1
Q ss_pred ------cCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee--c-CCceEEEEe-cCCCc
Q 046394 149 ------HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--P-GHAKTLDFS-RKDSG 203 (378)
Q Consensus 149 ------h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~-~~i~~~~~s-p~g~~ 203 (378)
....+..++++++|+++++...++.|.+||. +++.+..+ + ..+++++|+ |++..
T Consensus 222 ~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~ 285 (326)
T 2ghs_A 222 FIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASR 285 (326)
T ss_dssp EEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCE
T ss_pred EEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCE
Confidence 1123567889999998887777889999998 67776666 3 468999998 77654
No 223
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.77 E-value=8.4e-08 Score=93.48 Aligned_cols=157 Identities=7% Similarity=-0.112 Sum_probs=104.4
Q ss_pred eeeeecccce----eeEEeecCCCCceEEEEcCCCCEEEEEeCCC----cEEEEeCCCCeEEeeccCCCe-eEEEE----
Q 046394 27 AREVDILSSR----NQYDIMLPELGPYTLDFTSSGRYMAAAGCKG----YPYFYNRDGTELHCSKEHGEV-LKLQF---- 93 (378)
Q Consensus 27 i~~~d~~~~~----~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~-~~l~~---- 93 (378)
|++|++.+++ .++....|...+.++.|||||++|+.++.++ .|++|+..+.....+..+... ....|
T Consensus 204 v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~ 283 (695)
T 2bkl_A 204 IRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDR 283 (695)
T ss_dssp EEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEEETTE
T ss_pred EEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEecCCc
Confidence 9999998876 3344444556788999999999998887666 788887544445555544433 44444
Q ss_pred EEEEEe---CCCeEEEEEcCCCcE---EEEEecC-CCCeeEEEEcCCCCEEEEEcCCCe---------------eeec-C
Q 046394 94 LLASIN---KLGQLRYQNVTMGEI---VGNFWTG-LGRTDVIRVNPFNGVVSLGHSGGT---------------MLCH-Q 150 (378)
Q Consensus 94 ~l~s~~---~d~~i~iwd~~~~~~---~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d~~---------------~~~h-~ 150 (378)
+++++. .++.|.+||+.++.. ...+..+ ...+..++|+ ++.++++...++. +..+ .
T Consensus 284 l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~ 362 (695)
T 2bkl_A 284 FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGV 362 (695)
T ss_dssp EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSS
T ss_pred EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCC
Confidence 344443 358899999987653 3333333 4457788888 6677777777765 1112 4
Q ss_pred CCEEEEEEecCCCEEEEEE----CCCeEEEEEcCCcee
Q 046394 151 GPVSALAFHPNGHLMATSG----KDCKIKIWDLRKYEV 184 (378)
Q Consensus 151 ~~v~~~~~sp~g~~l~t~~----~d~~i~iwd~~~~~~ 184 (378)
+.|..++++|++..++... ..++|++||+.+++.
T Consensus 363 ~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 363 GAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp SEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 4566778899887766332 346899999988764
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.77 E-value=6.2e-07 Score=79.68 Aligned_cols=84 Identities=10% Similarity=-0.169 Sum_probs=63.7
Q ss_pred eeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEe----------CCCcEEEEe-CCCCeEEeeccC--------C
Q 046394 26 IAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAG----------CKGYPYFYN-RDGTELHCSKEH--------G 86 (378)
Q Consensus 26 ~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~----------~dg~i~iwd-~~~~~~~~~~~~--------~ 86 (378)
.+.++|..+++.+..+.....+ .+.++|||++++++. .++.|.+|| .++..+..+..+ .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 7889999999999999876454 899999999988886 367899999 567777777543 2
Q ss_pred CeeEEEE-----EEEEEeC--CCeEEE--EEcCC
Q 046394 87 EVLKLQF-----LLASINK--LGQLRY--QNVTM 111 (378)
Q Consensus 87 ~~~~l~~-----~l~s~~~--d~~i~i--wd~~~ 111 (378)
.+..+.| +++.+.. +..|.+ +|+.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 3467777 4444432 467888 88866
No 225
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.76 E-value=2.3e-05 Score=70.10 Aligned_cols=234 Identities=16% Similarity=0.135 Sum_probs=136.8
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCC---------CCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeecc
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPE---------LGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKE 84 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~---------~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~ 84 (378)
.+..|....++.+..+|..+++.++...... ..+.+ ....++..+++++.++.|..+| .+|..+.....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 3456666678899999999999988877642 22222 2222456788888999999999 56888877665
Q ss_pred CCCe-eEEEE---EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCe-----eEEEEcCCCCEEEEEcCCCe---eeecCCC
Q 046394 85 HGEV-LKLQF---LLASINKLGQLRYQNVTMGEIVGNFWTGLGRT-----DVIRVNPFNGVVSLGHSGGT---MLCHQGP 152 (378)
Q Consensus 85 ~~~~-~~l~~---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v-----~~~~~s~~~~~l~~~~~d~~---~~~h~~~ 152 (378)
.... ..... .++.++.++.|..+|..+|+.+..+....... ...... +..+++++.++. +....+.
T Consensus 132 ~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~ 209 (376)
T 3q7m_A 132 AGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQ 209 (376)
T ss_dssp SSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCC
T ss_pred CCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCc
Confidence 5444 33333 77788889999999999999888776432211 111222 345555555554 1111111
Q ss_pred EE-E-----------------EEEec--CCCEEEEEECCCeEEEEEcCCceeeeee-cCCceEEEE--------ecCCCc
Q 046394 153 VS-A-----------------LAFHP--NGHLMATSGKDCKIKIWDLRKYEVLQTL-PGHAKTLDF--------SRKDSG 203 (378)
Q Consensus 153 v~-~-----------------~~~sp--~g~~l~t~~~d~~i~iwd~~~~~~~~~~-~~~i~~~~~--------sp~g~~ 203 (378)
+. . +...| .+..++.++.++.|..+|..+++.+... ......+.. +.+|..
T Consensus 210 ~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~l~~~~~~g~l 289 (376)
T 3q7m_A 210 MIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 289 (376)
T ss_dssp EEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEEETTEEEEEETTCCE
T ss_pred EEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCCCCCceEECCEEEEEcCCCeE
Confidence 10 0 11122 2456777888999999999999887766 222222222 223444
Q ss_pred cccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCCeEEEEEcCC
Q 046394 204 DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGS 253 (378)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~~s 253 (378)
..++..++...-.........+..... .+..|.+++.+|.+..+...+
T Consensus 290 ~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 290 MALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVED 337 (376)
T ss_dssp EEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTT
T ss_pred EEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCC
Confidence 445555555443332101122222332 245677777777666665443
No 226
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.71 E-value=1.3e-06 Score=76.39 Aligned_cols=210 Identities=10% Similarity=-0.007 Sum_probs=121.4
Q ss_pred eeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccCCCe-eEEEE----EEEEEeCC
Q 046394 27 AREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEV-LKLQF----LLASINKL 101 (378)
Q Consensus 27 i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~l~~----~l~s~~~d 101 (378)
+..+|. +++....+..+........+. +..|.+++.++.|..+|..+.....+..+... .++.. .+..++.+
T Consensus 80 l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~ 156 (330)
T 3hxj_A 80 VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGTIYVGSND 156 (330)
T ss_dssp EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEEECTT
T ss_pred EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCEEEEEcCC
Confidence 666665 555444444332222333333 44677888888999999767776666554443 44444 56667788
Q ss_pred CeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe------------eeecCCCEEEEEEecCCCEEEEEE
Q 046394 102 GQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT------------MLCHQGPVSALAFHPNGHLMATSG 169 (378)
Q Consensus 102 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~------------~~~h~~~v~~~~~sp~g~~l~t~~ 169 (378)
+.|..+|.. ++.+..+......+.++.+.+++.+++.+ .+. .......+.++.+.++|. |..++
T Consensus 157 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t 232 (330)
T 3hxj_A 157 NYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGT-IYVTS 232 (330)
T ss_dssp SEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEECTTSCEEEEECCSSCCCSCCEECTTSC-EEEEE
T ss_pred CEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEECCCCcEEEEEccCCcceeceEECCCCe-EEEEc
Confidence 999999998 88877777666667778887887755544 333 111224466777888775 55566
Q ss_pred CCCeEEEEEcCCceeeeee--c-CCceEEEEecCCCc---------cccCCCCCceEEEeeccCCcceeeeEEcCCCCeE
Q 046394 170 KDCKIKIWDLRKYEVLQTL--P-GHAKTLDFSRKDSG---------DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVL 237 (378)
Q Consensus 170 ~d~~i~iwd~~~~~~~~~~--~-~~i~~~~~sp~g~~---------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 237 (378)
.++.|..+|. ++..+..+ . ..+.++.+.++|.. ..++. +...+..+.. ....+.++..+++|. |
T Consensus 233 ~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~~~~-~~~~~~~~~~d~~g~-l 308 (330)
T 3hxj_A 233 LDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNFET-GSWIIATPVIDENGT-I 308 (330)
T ss_dssp TTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEEEEEC-SSCCCSCCEECTTCC-E
T ss_pred CCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEEEEEEc-CCccccceEEcCCCE-E
Confidence 6788888874 56665555 2 33445555555543 22222 2333333332 334455666656654 3
Q ss_pred EEecCCCeEE
Q 046394 238 GIGHSMGVSG 247 (378)
Q Consensus 238 ~~~~~~g~~~ 247 (378)
.+++.+|.+.
T Consensus 309 ~~gt~~G~~~ 318 (330)
T 3hxj_A 309 YFGTRNGKFY 318 (330)
T ss_dssp EEECTTSCEE
T ss_pred EEEcCCCeEE
Confidence 3344555433
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.70 E-value=4.6e-06 Score=80.83 Aligned_cols=171 Identities=11% Similarity=0.038 Sum_probs=113.4
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCC----------c-eEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEee
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELG----------P-YTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCS 82 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~----------v-~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~ 82 (378)
.+..|....++.|..+|..+++.++.+..+... + .++++ .+..|++++.|+.|+.+| .+|+.+..+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 345666667889999999999999988764321 0 11222 356788899999999999 578888776
Q ss_pred ccC-C-----Ce--eEEEE--EEEEEe------CCCeEEEEEcCCCcEEEEEecCC------------------------
Q 046394 83 KEH-G-----EV--LKLQF--LLASIN------KLGQLRYQNVTMGEIVGNFWTGL------------------------ 122 (378)
Q Consensus 83 ~~~-~-----~~--~~l~~--~l~s~~------~d~~i~iwd~~~~~~~~~~~~~~------------------------ 122 (378)
... . .. ..+.. .++.++ .++.|..||..+|+.+..+....
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w 227 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAY 227 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTH
T ss_pred cCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCcee
Confidence 543 1 11 12223 444443 36899999999999988775311
Q ss_pred -------CCeeEEEEcCCCCEEEEEcCCC--------------------e-------------eee--cC-------CCE
Q 046394 123 -------GRTDVIRVNPFNGVVSLGHSGG--------------------T-------------MLC--HQ-------GPV 153 (378)
Q Consensus 123 -------~~v~~~~~s~~~~~l~~~~~d~--------------------~-------------~~~--h~-------~~v 153 (378)
.....++++|++..+++++.++ . +.. |. .++
T Consensus 228 ~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~ 307 (689)
T 1yiq_A 228 VEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHM 307 (689)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCE
T ss_pred eecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCc
Confidence 0112578899888888887664 1 111 11 122
Q ss_pred EEEEEecCCC---EEEEEECCCeEEEEEcCCceeeee
Q 046394 154 SALAFHPNGH---LMATSGKDCKIKIWDLRKYEVLQT 187 (378)
Q Consensus 154 ~~~~~sp~g~---~l~t~~~d~~i~iwd~~~~~~~~~ 187 (378)
.......+|. .++.++.+|.++++|..+|+++..
T Consensus 308 ~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 344 (689)
T 1yiq_A 308 ILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSA 344 (689)
T ss_dssp EEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred EEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecc
Confidence 2223333554 688889999999999999998743
No 228
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.69 E-value=2.3e-06 Score=79.49 Aligned_cols=233 Identities=8% Similarity=-0.019 Sum_probs=150.2
Q ss_pred CeeecCCceeeEEEec---cceeeeeecccceeeEEeec---------------------------------C------C
Q 046394 8 GYLEAEGVEKTWRIKQ---EAIAREVDILSSRNQYDIML---------------------------------P------E 45 (378)
Q Consensus 8 ~~l~~~~~~~~~~~~~---~~~i~~~d~~~~~~~~~l~~---------------------------------~------~ 45 (378)
.++.++..|..|.+|+ .+.++++-+-+++.+..+.. + .
T Consensus 5 ~~~~~g~~d~~~~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~ 84 (595)
T 1fwx_A 5 GSVAPGQLDDYYGFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDN 84 (595)
T ss_dssp CCCCTTCCCSEEEEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCC
T ss_pred ccCCCCCcccEEEEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceeccc
Confidence 3556666787777765 57889888888776544321 0 0
Q ss_pred CCceEEEEcC-----CCCEEEEEeC-CCcEEEEeCCC-CeEE--eeccCCCeeEEEE-------EEEEE-----------
Q 046394 46 LGPYTLDFTS-----SGRYMAAAGC-KGYPYFYNRDG-TELH--CSKEHGEVLKLQF-------LLASI----------- 98 (378)
Q Consensus 46 ~~v~~~~~sp-----~g~~l~~~~~-dg~i~iwd~~~-~~~~--~~~~~~~~~~l~~-------~l~s~----------- 98 (378)
+.......|. ||++|++... ++.|.+.|... +... .+....++..+++ +++++
T Consensus 85 gd~hh~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg 164 (595)
T 1fwx_A 85 GDLHHVHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDG 164 (595)
T ss_dssp CCBCCEEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSS
T ss_pred CCCCccccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCC
Confidence 1122345554 7888887766 55699999655 4444 3333344555554 44444
Q ss_pred -------eCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------------------
Q 046394 99 -------NKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT-------------------------- 145 (378)
Q Consensus 99 -------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-------------------------- 145 (378)
-.++.+.++|..+.+.+.++.... ....++++|+|+++++++.+..
T Consensus 165 ~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~ 243 (595)
T 1fwx_A 165 TNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK 243 (595)
T ss_dssp SSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH
T ss_pred cccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeE
Confidence 235689999999999888887543 5678899999999999987652
Q ss_pred ---------------eeecC--C-----------CEEEEEEecCCCEEEEEE-CCCeEEEEEcCCce------------e
Q 046394 146 ---------------MLCHQ--G-----------PVSALAFHPNGHLMATSG-KDCKIKIWDLRKYE------------V 184 (378)
Q Consensus 146 ---------------~~~h~--~-----------~v~~~~~sp~g~~l~t~~-~d~~i~iwd~~~~~------------~ 184 (378)
+.... + ...++.++|||+++++++ .+.+|.++|+.+.+ .
T Consensus 244 ~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v 323 (595)
T 1fwx_A 244 AIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAV 323 (595)
T ss_dssp HHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGE
T ss_pred eccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccce
Confidence 11111 1 234688999999876655 67899999999753 2
Q ss_pred eeee--cCCceEEEEecCCCc----------cccCCCC----------CceEEEeeccCCcc-----eeeeEEcCCCCeE
Q 046394 185 LQTL--PGHAKTLDFSRKDSG----------DFSGSHN----------YNRYMGYSMVKGYQ-----IGKVSFRPYEDVL 237 (378)
Q Consensus 185 ~~~~--~~~i~~~~~sp~g~~----------~~~~~~~----------~~~~~~~~~~~~~~-----v~~~~~sp~g~~l 237 (378)
...+ ......++|+|+|.. ..|+... ...+..... |.++ -..+.++|||++|
T Consensus 324 ~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV-~yqpGh~~~~~g~t~~~DGk~l 402 (595)
T 1fwx_A 324 VAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDV-HYQPGHLKTVMGETLDATNDWL 402 (595)
T ss_dssp EECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEEC-SSCEEEEEETTTTSTTCCSSEE
T ss_pred EEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeec-ccccccceeccceEeCCCCCEE
Confidence 3344 567899999999931 2333322 334444443 3332 1344678999998
Q ss_pred EEecC
Q 046394 238 GIGHS 242 (378)
Q Consensus 238 ~~~~~ 242 (378)
+++..
T Consensus 403 ~~~Nk 407 (595)
T 1fwx_A 403 VCLSK 407 (595)
T ss_dssp EEEES
T ss_pred EEcCC
Confidence 87654
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.65 E-value=2.5e-06 Score=82.58 Aligned_cols=97 Identities=10% Similarity=0.028 Sum_probs=71.1
Q ss_pred cceeeeeecccceeeEEeecCCCC--------------------------------ceEEEEcCCCCEEEEEeCCC----
Q 046394 24 EAIAREVDILSSRNQYDIMLPELG--------------------------------PYTLDFTSSGRYMAAAGCKG---- 67 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~~~--------------------------------v~~~~~sp~g~~l~~~~~dg---- 67 (378)
++.|..+|..+++.++.+...... ...++++|++..|++++.++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 688999999999999887653221 13578899998888887664
Q ss_pred ---------------cEEEEe-CCCCeEEeecc--CC--------CeeEEE--E------EEEEEeCCCeEEEEEcCCCc
Q 046394 68 ---------------YPYFYN-RDGTELHCSKE--HG--------EVLKLQ--F------LLASINKLGQLRYQNVTMGE 113 (378)
Q Consensus 68 ---------------~i~iwd-~~~~~~~~~~~--~~--------~~~~l~--~------~l~s~~~d~~i~iwd~~~~~ 113 (378)
.|..+| .+|..+..+.. |. .+..+. . .++.++.+|.|+++|..+|+
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 499999 56888777653 21 111111 1 57888899999999999999
Q ss_pred EEEEEec
Q 046394 114 IVGNFWT 120 (378)
Q Consensus 114 ~~~~~~~ 120 (378)
.+..+..
T Consensus 349 ~l~~~~~ 355 (677)
T 1kb0_A 349 FISAKNF 355 (677)
T ss_dssp EEEEEES
T ss_pred Eeccccc
Confidence 9877653
No 230
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.65 E-value=9.4e-06 Score=71.73 Aligned_cols=182 Identities=10% Similarity=0.009 Sum_probs=101.7
Q ss_pred CCceEEEEcCCCCEEEEEeC--CCcEEEEeC-CCCeEEeecc-------C-CCeeEEEE-----EEEEEeC-----CCeE
Q 046394 46 LGPYTLDFTSSGRYMAAAGC--KGYPYFYNR-DGTELHCSKE-------H-GEVLKLQF-----LLASINK-----LGQL 104 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~~~--dg~i~iwd~-~~~~~~~~~~-------~-~~~~~l~~-----~l~s~~~-----d~~i 104 (378)
..+..++++|+|+.+++... ++.+.||.+ ++ .+..+.. + ..+..++| ++++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g-~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQD-GLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETT-EEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCC-CeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 57899999999998888642 342444443 44 3333321 1 13477888 3333322 5789
Q ss_pred EEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecCCCEEEEEEecCC-CEEEEEE---CCCeEEEEEcC
Q 046394 105 RYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNG-HLMATSG---KDCKIKIWDLR 180 (378)
Q Consensus 105 ~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~v~~~~~sp~g-~~l~t~~---~d~~i~iwd~~ 180 (378)
.+||+.+++.+..+...... ..+...+..++++|++ ..+++.+ .++.|.+||+.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~----------------------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~ 153 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPI----------------------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ 153 (343)
T ss_dssp EEEETTTTEEEEEEECCTTT----------------------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT
T ss_pred EEEECCCCeEEEEEECChhh----------------------cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC
Confidence 99999988877766532110 0122334566777643 3334444 46677777776
Q ss_pred Cceeeeee-c-------------------------------CCceEEEEecCCCccccCCCCCceEEEee----------
Q 046394 181 KYEVLQTL-P-------------------------------GHAKTLDFSRKDSGDFSGSHNYNRYMGYS---------- 218 (378)
Q Consensus 181 ~~~~~~~~-~-------------------------------~~i~~~~~sp~g~~~~~~~~~~~~~~~~~---------- 218 (378)
+++....+ . ..++.++|+|||....+.......+..+.
T Consensus 154 ~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~ 233 (343)
T 2qe8_A 154 TGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLT 233 (343)
T ss_dssp TCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCC
T ss_pred CCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCC
Confidence 65543332 0 12477899999875333221221121111
Q ss_pred -----------ccCCcceeeeEEcCCCCeEEEecCCCeEEEEEc
Q 046394 219 -----------MVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIP 251 (378)
Q Consensus 219 -----------~~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~~~ 251 (378)
+ +......++++++|.++++...++.+..|.+
T Consensus 234 ~~~~~~~~~~~g-~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 234 DAELGSKIERYS-EKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp HHHHHTTCEEEE-ECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred hhhhhcceEecc-cCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 1 1223556888888877666666665555554
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.65 E-value=6.5e-06 Score=79.79 Aligned_cols=224 Identities=15% Similarity=0.144 Sum_probs=137.3
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecC--CCCceEEEEcC---CCCEEEEEe------CCCcEEEEe-CCCCeEEeec
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLP--ELGPYTLDFTS---SGRYMAAAG------CKGYPYFYN-RDGTELHCSK 83 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~--~~~v~~~~~sp---~g~~l~~~~------~dg~i~iwd-~~~~~~~~~~ 83 (378)
++.|....++.+..+|..+++.++.+... ......+..+| ++ .+++++ .+|.|+.|| .+|+.+..+.
T Consensus 122 g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 122 GKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 45666677899999999999999888763 11112222223 44 444443 368999999 6788887664
Q ss_pred cCC-------------------------------Ce-eEEEE-----EEEEEeCCC-------------------eEEEE
Q 046394 84 EHG-------------------------------EV-LKLQF-----LLASINKLG-------------------QLRYQ 107 (378)
Q Consensus 84 ~~~-------------------------------~~-~~l~~-----~l~s~~~d~-------------------~i~iw 107 (378)
... .. ..+.+ +++.+..++ .|..|
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 210 11 24556 667776665 49999
Q ss_pred EcCCCcEEEEEecCCC---------CeeEEEEcCCCC---EEEEEcCCCe---eeecCCC--------------------
Q 046394 108 NVTMGEIVGNFWTGLG---------RTDVIRVNPFNG---VVSLGHSGGT---MLCHQGP-------------------- 152 (378)
Q Consensus 108 d~~~~~~~~~~~~~~~---------~v~~~~~s~~~~---~l~~~~~d~~---~~~h~~~-------------------- 152 (378)
|..+|+.+..+..... .+.......+|. .++.++.+|. +....+.
T Consensus 281 D~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~ 360 (689)
T 1yiq_A 281 NADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKT 360 (689)
T ss_dssp ETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTT
T ss_pred EccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccC
Confidence 9999999988764211 111122222443 5556665555 1111111
Q ss_pred ------------------------------EEEEEEecCCCEEEEEEC--------------------------------
Q 046394 153 ------------------------------VSALAFHPNGHLMATSGK-------------------------------- 170 (378)
Q Consensus 153 ------------------------------v~~~~~sp~g~~l~t~~~-------------------------------- 170 (378)
...++|+|+..++++.+.
T Consensus 361 ~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p 440 (689)
T 1yiq_A 361 GRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMP 440 (689)
T ss_dssp TEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCC
T ss_pred CCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccC
Confidence 012688998777776532
Q ss_pred -------------CCeEEEEEcCCceeeeee--cCCceE--------EEE--ecCCCccccCCCCCceEEEeeccCCcce
Q 046394 171 -------------DCKIKIWDLRKYEVLQTL--PGHAKT--------LDF--SRKDSGDFSGSHNYNRYMGYSMVKGYQI 225 (378)
Q Consensus 171 -------------d~~i~iwd~~~~~~~~~~--~~~i~~--------~~~--sp~g~~~~~~~~~~~~~~~~~~~~~~~v 225 (378)
+|.|..||+.+++.+..+ +.+... +.| +.||.+.+++..+++.+-.+...++...
T Consensus 441 ~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~ 520 (689)
T 1yiq_A 441 EGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMA 520 (689)
T ss_dssp SSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred cccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCccc
Confidence 378999999999998777 332222 222 3456668888888888877765333334
Q ss_pred eeeEEcCCCC-eEEEe
Q 046394 226 GKVSFRPYED-VLGIG 240 (378)
Q Consensus 226 ~~~~~sp~g~-~l~~~ 240 (378)
.-+.|..+|+ |+++.
T Consensus 521 ~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 521 APVTYSVDGEQYVTFM 536 (689)
T ss_dssp CCEEEEETTEEEEEEE
T ss_pred CceEEEECCEEEEEEE
Confidence 5577888986 44433
No 232
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.63 E-value=2.7e-07 Score=80.94 Aligned_cols=179 Identities=13% Similarity=0.029 Sum_probs=116.3
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccCCCe-eEEEE
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEV-LKLQF 93 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~l~~ 93 (378)
....+....++.+..|| .+++.......+...+.++...++|. |.+++.+ |..+|.++..+..+...... ....+
T Consensus 30 ~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~~g~~~~~~~~~~~~~~~~~~ 105 (330)
T 3hxj_A 30 NGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINPDGTEKWRFDTKKAIVSDFTI 105 (330)
T ss_dssp TSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECCCGGGGGGSCC-----CCEEE
T ss_pred CCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECCCCcEEEEEECCCCcccCceE
Confidence 34455555577788899 88887776665544556777777775 4555444 88999877665544433333 33333
Q ss_pred ---EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe-------------eeecCCCEEEEE
Q 046394 94 ---LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT-------------MLCHQGPVSALA 157 (378)
Q Consensus 94 ---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-------------~~~h~~~v~~~~ 157 (378)
.+..++.++.|..+|.. ++....+......+.++...+++.+++ ++.++. +......+.++.
T Consensus 106 ~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~v-gt~~~~l~~~d~~g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 106 FEDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYV-GSNDNYLYAINPDGTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp ETTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEE-ECTTSEEEEECTTSCEEEEEECSSCCCSCCE
T ss_pred ECCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEE-EcCCCEEEEECCCCCEeEEEecCCCceeeeE
Confidence 67778888999999998 887777766656667777887777544 444443 111233455566
Q ss_pred EecCCCEEEEEECCCeEEEEEcCCceeeeee---cCCceEEEEecCCCc
Q 046394 158 FHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSG 203 (378)
Q Consensus 158 ~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~---~~~i~~~~~sp~g~~ 203 (378)
+.++|.+++.+ +.|..|| .+++.+..+ ...+.++...++|..
T Consensus 184 ~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l 228 (330)
T 3hxj_A 184 IGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTI 228 (330)
T ss_dssp ECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCE
T ss_pred EcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeE
Confidence 66777755444 7799999 777776666 345778888887754
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.63 E-value=2.5e-06 Score=75.84 Aligned_cols=53 Identities=11% Similarity=-0.058 Sum_probs=43.2
Q ss_pred cceeeeeecccceeeEEeecC-------CCCceEEEEcCCCCEEEEEeC--CCcEEE--EeCCC
Q 046394 24 EAIAREVDILSSRNQYDIMLP-------ELGPYTLDFTSSGRYMAAAGC--KGYPYF--YNRDG 76 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~-------~~~v~~~~~sp~g~~l~~~~~--dg~i~i--wd~~~ 76 (378)
++.|.+||+.+++.+..+..+ ...+..+++||||++|+++.. +..|.+ +|...
T Consensus 95 ~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 95 TDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 688999999999999998764 135789999999999998875 356888 88543
No 234
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.62 E-value=1.1e-06 Score=86.10 Aligned_cols=158 Identities=8% Similarity=-0.018 Sum_probs=101.2
Q ss_pred eeeeeeccccee----eEEeecCCCCceEEEEcCCCCEEEEEeCCC-----cEEEEeCCCC--e-EEeeccCCCe-eEEE
Q 046394 26 IAREVDILSSRN----QYDIMLPELGPYTLDFTSSGRYMAAAGCKG-----YPYFYNRDGT--E-LHCSKEHGEV-LKLQ 92 (378)
Q Consensus 26 ~i~~~d~~~~~~----~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg-----~i~iwd~~~~--~-~~~~~~~~~~-~~l~ 92 (378)
.|.+|++.++.. ++....+...+.++.|||||++|+..+.++ .|++||..+. . ...+..+... ....
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~ 323 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV 323 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE
T ss_pred EEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE
Confidence 478889877652 222233333578999999999988877544 7999996443 3 4555554433 3333
Q ss_pred E----EEEEEeC----CCeEEEEEcCCC--cEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe---------------ee
Q 046394 93 F----LLASINK----LGQLRYQNVTMG--EIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT---------------ML 147 (378)
Q Consensus 93 ~----~l~s~~~----d~~i~iwd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~---------------~~ 147 (378)
+ .|+..+. ++.|.+||+.++ .....+..+...+..+.++ ++.++++...++. +.
T Consensus 324 ~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~ 402 (741)
T 1yr2_A 324 DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVS 402 (741)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECB
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeecc
Confidence 3 4444443 456999999874 3444444444556677777 5567777766665 11
Q ss_pred e-cCCCEEEEEEecCCCEEE-EEE---CCCeEEEEEcCCcee
Q 046394 148 C-HQGPVSALAFHPNGHLMA-TSG---KDCKIKIWDLRKYEV 184 (378)
Q Consensus 148 ~-h~~~v~~~~~sp~g~~l~-t~~---~d~~i~iwd~~~~~~ 184 (378)
. +.+.|..++++|++..|+ +.+ ..++|++||+.+++.
T Consensus 403 ~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 403 LPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp CSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 1 245678889999887655 322 346899999988763
No 235
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.60 E-value=1.4e-05 Score=66.51 Aligned_cols=141 Identities=13% Similarity=0.105 Sum_probs=97.4
Q ss_pred eccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEE-EEeCCCcEEEEe-CCCCeEEeeccCCCeeEEEE---EEE
Q 046394 22 KQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMA-AAGCKGYPYFYN-RDGTELHCSKEHGEVLKLQF---LLA 96 (378)
Q Consensus 22 ~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~-~~~~dg~i~iwd-~~~~~~~~~~~~~~~~~l~~---~l~ 96 (378)
..++.|+++|+.+++.+..+ .. ...+.....+++..|+ ....++.+.+|| .+...+.++........+++ .|+
T Consensus 72 G~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt~Dg~~L~ 149 (268)
T 3nok_A 72 GHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGWGLCYWNGKLV 149 (268)
T ss_dssp TTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCCCEEEETTEEE
T ss_pred CCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCceeEEecCCCEEE
Confidence 34567999999999988887 43 3444433333444444 344588999999 56677777775444477777 555
Q ss_pred EEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecCCCEEEEEEecCCCEEEEEECCCeEEE
Q 046394 97 SINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKI 176 (378)
Q Consensus 97 s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~i 176 (378)
.+..++.|.++|..+.+.+..+...... ..-..++.+.|. +|..++..-.++.|.+
T Consensus 150 vSdGs~~l~~iDp~T~~v~~~I~V~~~g-----------------------~~v~~lNeLe~~-dG~lyanvw~s~~I~v 205 (268)
T 3nok_A 150 RSDGGTMLTFHEPDGFALVGAVQVKLRG-----------------------QPVELINELECA-NGVIYANIWHSSDVLE 205 (268)
T ss_dssp EECSSSEEEEECTTTCCEEEEEECEETT-----------------------EECCCEEEEEEE-TTEEEEEETTCSEEEE
T ss_pred EECCCCEEEEEcCCCCeEEEEEEeCCCC-----------------------cccccccccEEe-CCEEEEEECCCCeEEE
Confidence 5556889999999999988877632110 112244667776 7766666667889999
Q ss_pred EEcCCceeeeee
Q 046394 177 WDLRKYEVLQTL 188 (378)
Q Consensus 177 wd~~~~~~~~~~ 188 (378)
.|..+++.+..+
T Consensus 206 IDp~TG~V~~~I 217 (268)
T 3nok_A 206 IDPATGTVVGVI 217 (268)
T ss_dssp ECTTTCBEEEEE
T ss_pred EeCCCCcEEEEE
Confidence 999999988876
No 236
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.60 E-value=0.00011 Score=62.21 Aligned_cols=177 Identities=11% Similarity=-0.015 Sum_probs=107.2
Q ss_pred cceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEeecc--CCCeeEEEE-----E-
Q 046394 24 EAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAG-CKGYPYFYNRDGTELHCSKE--HGEVLKLQF-----L- 94 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~--~~~~~~l~~-----~- 94 (378)
.+.|..+++........+...-..+.+++++|++..|+.+. ..+.|.+++.++.....+.. ...+..+++ .
T Consensus 57 ~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~l 136 (267)
T 1npe_A 57 EPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNL 136 (267)
T ss_dssp TTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEE
T ss_pred CCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEE
Confidence 45677777765543322322235788999999776666554 46789999987754433322 234577777 3
Q ss_pred EEEEeC--CCeEEEEEcCCCcEEEEEe-cCCCCeeEEEEcCCCCEEEEEcCC-Ce-------------eeecCCCEEEEE
Q 046394 95 LASINK--LGQLRYQNVTMGEIVGNFW-TGLGRTDVIRVNPFNGVVSLGHSG-GT-------------MLCHQGPVSALA 157 (378)
Q Consensus 95 l~s~~~--d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d-~~-------------~~~h~~~v~~~~ 157 (378)
+++... .+.|..+++.. .....+. ........++++|++..|+++... +. +.........++
T Consensus 137 yv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~ 215 (267)
T 1npe_A 137 YWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVT 215 (267)
T ss_dssp EEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEE
T ss_pred EEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEE
Confidence 333332 46888888753 3223332 333567889999988766655543 33 111122345565
Q ss_pred EecCCCEEEEEECCCeEEEEEcCCceeeeee--cC--CceEEEEecCCC
Q 046394 158 FHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--PG--HAKTLDFSRKDS 202 (378)
Q Consensus 158 ~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~--~~--~i~~~~~sp~g~ 202 (378)
+. .+.++++....+.|.++|..+++.+.++ .. ....+++.|++.
T Consensus 216 ~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 216 SY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred Ee-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 54 3444444446688999999888888777 21 467777777764
No 237
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.58 E-value=7.4e-05 Score=63.26 Aligned_cols=164 Identities=11% Similarity=0.040 Sum_probs=100.6
Q ss_pred EEeccceeeeeecccceee-----EEeecCCCCceEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEeec-c-CCCeeEE
Q 046394 20 RIKQEAIAREVDILSSRNQ-----YDIMLPELGPYTLDFTSSGRYMAAAG-CKGYPYFYNRDGTELHCSK-E-HGEVLKL 91 (378)
Q Consensus 20 ~~~~~~~i~~~d~~~~~~~-----~~l~~~~~~v~~~~~sp~g~~l~~~~-~dg~i~iwd~~~~~~~~~~-~-~~~~~~l 91 (378)
.+.+.+.|+.+++...... ..+......+.+++|+|++..|+.+. .++.|.+++.++.....+. . ...+..+
T Consensus 5 ~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i 84 (267)
T 1npe_A 5 LFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGI 84 (267)
T ss_dssp EEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEE
T ss_pred EEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEE
Confidence 3344556777777654321 11222223578999999776666554 4678999997776444332 2 2345777
Q ss_pred EE------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCC---Ce-------------ee-e
Q 046394 92 QF------LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSG---GT-------------ML-C 148 (378)
Q Consensus 92 ~~------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---~~-------------~~-~ 148 (378)
++ ++++....+.|.++++..................++++|++..|+.+... +. +. .
T Consensus 85 a~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~ 164 (267)
T 1npe_A 85 ALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD 164 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT
T ss_pred EEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC
Confidence 77 55555667889999986433222232233567899999976655544432 22 11 1
Q ss_pred cCCCEEEEEEecCCCEE-EEEECCCeEEEEEcCCce
Q 046394 149 HQGPVSALAFHPNGHLM-ATSGKDCKIKIWDLRKYE 183 (378)
Q Consensus 149 h~~~v~~~~~sp~g~~l-~t~~~d~~i~iwd~~~~~ 183 (378)
.......++++|++..| ++....+.|.++|+....
T Consensus 165 ~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 200 (267)
T 1npe_A 165 NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG 200 (267)
T ss_dssp TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc
Confidence 12356789999977665 455566799999997543
No 238
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.53 E-value=4.7e-05 Score=68.41 Aligned_cols=216 Identities=12% Similarity=0.022 Sum_probs=127.6
Q ss_pred ceeeeeeccc-----ceeeEEeecCC--CCceEEEE-----------c--CCCCEEEEE-eCCCcEEEEeCC-C----Ce
Q 046394 25 AIAREVDILS-----SRNQYDIMLPE--LGPYTLDF-----------T--SSGRYMAAA-GCKGYPYFYNRD-G----TE 78 (378)
Q Consensus 25 ~~i~~~d~~~-----~~~~~~l~~~~--~~v~~~~~-----------s--p~g~~l~~~-~~dg~i~iwd~~-~----~~ 78 (378)
..+.+.|+.. ++.+..+.... .....+.| + +++++|++. ..++.|+|+|.. . ..
T Consensus 43 d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~ 122 (462)
T 2ece_A 43 DFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKI 122 (462)
T ss_dssp CEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEE
T ss_pred CeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCcee
Confidence 5677788876 67776665432 12333344 6 788877665 458899999953 2 23
Q ss_pred EEeec--------cCCCeeEEEE----EEEEEeCC------CeEEEEEcCCCcEEEEEecCC---CCeeEEEEcCCCCEE
Q 046394 79 LHCSK--------EHGEVLKLQF----LLASINKL------GQLRYQNVTMGEIVGNFWTGL---GRTDVIRVNPFNGVV 137 (378)
Q Consensus 79 ~~~~~--------~~~~~~~l~~----~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l 137 (378)
..++. +...+..+.. +++++..+ +.|.++|..+++.+..+.... .....+.|+|+++.+
T Consensus 123 ~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~m 202 (462)
T 2ece_A 123 IKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVL 202 (462)
T ss_dssp EEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEE
T ss_pred eeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEE
Confidence 34442 1112233333 44555444 789999999999999886332 224458889999988
Q ss_pred EEEcC-------------------CCe--------------eee--cCCCEEEEEE--ecCCCEEEEEE------CCCeE
Q 046394 138 SLGHS-------------------GGT--------------MLC--HQGPVSALAF--HPNGHLMATSG------KDCKI 174 (378)
Q Consensus 138 ~~~~~-------------------d~~--------------~~~--h~~~v~~~~~--sp~g~~l~t~~------~d~~i 174 (378)
+++.- ... +.. .......+.| +|+|+++.+++ .+++|
T Consensus 203 vsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V 282 (462)
T 2ece_A 203 VSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSI 282 (462)
T ss_dssp EECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEE
T ss_pred EEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceE
Confidence 88851 111 110 0012334555 99999876655 56688
Q ss_pred EEEEcCCcee--eeee---------------------cCCceEEEEecCCCcc--------------ccCCCCCceEEEe
Q 046394 175 KIWDLRKYEV--LQTL---------------------PGHAKTLDFSRKDSGD--------------FSGSHNYNRYMGY 217 (378)
Q Consensus 175 ~iwd~~~~~~--~~~~---------------------~~~i~~~~~sp~g~~~--------------~~~~~~~~~~~~~ 217 (378)
.+|....+.. ...+ ...+..+.+||||++. +.+......+...
T Consensus 283 ~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I 362 (462)
T 2ece_A 283 WLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKV 362 (462)
T ss_dssp EEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEE
T ss_pred EEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEE
Confidence 7766544321 1111 1346889999999861 1122223333333
Q ss_pred eccCC----------c----ceeeeEEcCCCCeEEEec
Q 046394 218 SMVKG----------Y----QIGKVSFRPYEDVLGIGH 241 (378)
Q Consensus 218 ~~~~~----------~----~v~~~~~sp~g~~l~~~~ 241 (378)
.. .+ . ....+.++|||++|.+++
T Consensus 363 ~t-GG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 363 KL-GGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EC-BTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred Ee-CCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 22 11 1 257899999999888777
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.52 E-value=7.5e-05 Score=66.68 Aligned_cols=170 Identities=11% Similarity=0.035 Sum_probs=107.8
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe-----
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV----- 88 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~----- 88 (378)
.+..|....++.+..+|..+++..+............... +..+++++.++.|..+| .+|..+..+......
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 3456666778899999999999988887653322222232 44788888899999999 578887776543321
Q ss_pred -eEEEE---EEEEEeCCCeEEEEEcCCCcEEEEEecCCCC-------eeEEEEcC--CCCEEEEEcCCCe---e------
Q 046394 89 -LKLQF---LLASINKLGQLRYQNVTMGEIVGNFWTGLGR-------TDVIRVNP--FNGVVSLGHSGGT---M------ 146 (378)
Q Consensus 89 -~~l~~---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-------v~~~~~s~--~~~~l~~~~~d~~---~------ 146 (378)
..... .++.++.++.|..+|..+|+.+..+...... +..+...| .+..+++++.++. +
T Consensus 181 ~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~ 260 (376)
T 3q7m_A 181 ESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ 260 (376)
T ss_dssp CCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCC
T ss_pred CCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCc
Confidence 12222 6777888999999999999988776532110 00010111 2344555554443 1
Q ss_pred ---eecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee
Q 046394 147 ---LCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188 (378)
Q Consensus 147 ---~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~ 188 (378)
.........+.. ++..+..++.++.|..+|..+++.+...
T Consensus 261 ~~w~~~~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 261 IMWKRELGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQ 303 (376)
T ss_dssp EEEEECCCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEE
T ss_pred EEeeccCCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEee
Confidence 111222333333 3567888888999999999999887655
No 240
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.52 E-value=4.2e-05 Score=63.65 Aligned_cols=139 Identities=17% Similarity=0.134 Sum_probs=98.0
Q ss_pred ceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEe-CCCcEEEEe-CCCCeEEeeccCCCeeEEEE---EEEEEe
Q 046394 25 AIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAG-CKGYPYFYN-RDGTELHCSKEHGEVLKLQF---LLASIN 99 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~-~dg~i~iwd-~~~~~~~~~~~~~~~~~l~~---~l~s~~ 99 (378)
..|+++|+.+++.+..+... ..++.....+++..|.... .++.+.+|| .+...+..+........+++ .|+.+.
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~Sd 143 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSD 143 (262)
T ss_dssp EEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCCEEECSSCEEECC
T ss_pred ceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCceEEecCCCEEEEEC
Confidence 38999999999999888775 4555544444566665554 488999999 56777777776544467777 444444
Q ss_pred CCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecCCCEEEEEEecCCCEEEEEECCCeEEEEEc
Q 046394 100 KLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDL 179 (378)
Q Consensus 100 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~ 179 (378)
.++.|.++|..+.+.+..+...... ..-..++.+.|. +|..++..-.++.|.+.|.
T Consensus 144 Gs~~i~~iDp~T~~v~~~I~V~~~g-----------------------~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp 199 (262)
T 3nol_A 144 GTPVLRFLDPESLTPVRTITVTAHG-----------------------EELPELNELEWV-DGEIFANVWQTNKIVRIDP 199 (262)
T ss_dssp SSSEEEEECTTTCSEEEEEECEETT-----------------------EECCCEEEEEEE-TTEEEEEETTSSEEEEECT
T ss_pred CCCeEEEEcCCCCeEEEEEEeccCC-----------------------ccccccceeEEE-CCEEEEEEccCCeEEEEEC
Confidence 5788999999999988887632100 111334556776 7776666667889999999
Q ss_pred CCceeeeee
Q 046394 180 RKYEVLQTL 188 (378)
Q Consensus 180 ~~~~~~~~~ 188 (378)
.+++.+..+
T Consensus 200 ~tG~V~~~I 208 (262)
T 3nol_A 200 ETGKVTGII 208 (262)
T ss_dssp TTCBEEEEE
T ss_pred CCCcEEEEE
Confidence 999988876
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.49 E-value=7e-05 Score=62.36 Aligned_cols=167 Identities=10% Similarity=0.008 Sum_probs=108.7
Q ss_pred eEEeecCCCCc--eEEEEcCCCCEEEEEeCCC--cEEEEe-CCCCeEEeeccCCCe--eEEEE----EEEEEeCCCeEEE
Q 046394 38 QYDIMLPELGP--YTLDFTSSGRYMAAAGCKG--YPYFYN-RDGTELHCSKEHGEV--LKLQF----LLASINKLGQLRY 106 (378)
Q Consensus 38 ~~~l~~~~~~v--~~~~~sp~g~~l~~~~~dg--~i~iwd-~~~~~~~~~~~~~~~--~~l~~----~l~s~~~d~~i~i 106 (378)
+.++ .|+... ..+.|+ ++.++.+.+.+| .|+++| .+++.+..+...... -.+.+ +++....++.+.+
T Consensus 34 v~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v 111 (262)
T 3nol_A 34 VHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFV 111 (262)
T ss_dssp EEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEE
T ss_pred EEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEE
Confidence 3444 454444 589998 676666666666 899999 567777776654443 34555 5555567899999
Q ss_pred EEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeee
Q 046394 107 QNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQ 186 (378)
Q Consensus 107 wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~ 186 (378)
||..+.+.+.++.... .+ ..+++++..|+.+..++.|.++|..+.+.+.
T Consensus 112 ~D~~t~~~~~ti~~~~---------------------------eG----~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~ 160 (262)
T 3nol_A 112 WNIRNLRQVRSFNYDG---------------------------EG----WGLTHNDQYLIMSDGTPVLRFLDPESLTPVR 160 (262)
T ss_dssp EETTTCCEEEEEECSS---------------------------CC----CCEEECSSCEEECCSSSEEEEECTTTCSEEE
T ss_pred EECccCcEEEEEECCC---------------------------Cc----eEEecCCCEEEEECCCCeEEEEcCCCCeEEE
Confidence 9999999999987421 11 2233566666666667889999999988887
Q ss_pred ee--c------CCceEEEEecCCCc----------cccCCCCCceEEEeecc-----------CCcceeeeEEcCCCCeE
Q 046394 187 TL--P------GHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSMV-----------KGYQIGKVSFRPYEDVL 237 (378)
Q Consensus 187 ~~--~------~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~~-----------~~~~v~~~~~sp~g~~l 237 (378)
++ . ..++.+.|. +|.. .+.+..++.....+... .....+.++|+|+++.|
T Consensus 161 ~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~l 239 (262)
T 3nol_A 161 TITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRL 239 (262)
T ss_dssp EEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEE
T ss_pred EEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEE
Confidence 76 1 234557776 5542 33345566665555431 12345889999987644
Q ss_pred E
Q 046394 238 G 238 (378)
Q Consensus 238 ~ 238 (378)
.
T Consensus 240 f 240 (262)
T 3nol_A 240 F 240 (262)
T ss_dssp E
T ss_pred E
Confidence 3
No 242
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.44 E-value=6.8e-05 Score=72.41 Aligned_cols=172 Identities=11% Similarity=0.095 Sum_probs=113.4
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCc-----------eEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEee
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGP-----------YTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCS 82 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v-----------~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~ 82 (378)
.+..|....++.|..+|..+++.++.+....... ..+++ .+..|++++.|+.|+.+| .+|+.+..+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 3456666678899999999999998886543211 12233 255788888999999999 678888776
Q ss_pred ccCC-----Ce-eE-EEE--EEEEEeC------CCeEEEEEcCCCcEEEEEecCCC------------------------
Q 046394 83 KEHG-----EV-LK-LQF--LLASINK------LGQLRYQNVTMGEIVGNFWTGLG------------------------ 123 (378)
Q Consensus 83 ~~~~-----~~-~~-l~~--~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~------------------------ 123 (378)
.... .. .. +.. .++.+.. ++.|..+|..+|+.+..+.....
T Consensus 144 ~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w 223 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYW 223 (668)
T ss_dssp ECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHH
T ss_pred ccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcccee
Confidence 5431 11 12 223 4444432 58999999999999888763210
Q ss_pred -------CeeEEEEcCCCCEEEEEcCCC--------------------e-------------ee--ecC-------CCEE
Q 046394 124 -------RTDVIRVNPFNGVVSLGHSGG--------------------T-------------ML--CHQ-------GPVS 154 (378)
Q Consensus 124 -------~v~~~~~s~~~~~l~~~~~d~--------------------~-------------~~--~h~-------~~v~ 154 (378)
....++++|+...+++++.++ . +. .|. .++.
T Consensus 224 ~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~ 303 (668)
T 1kv9_A 224 KLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQIT 303 (668)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEE
T ss_pred eeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcE
Confidence 112468888888888776554 1 11 111 2233
Q ss_pred EEEEecCCC---EEEEEECCCeEEEEEcCCceeeeee
Q 046394 155 ALAFHPNGH---LMATSGKDCKIKIWDLRKYEVLQTL 188 (378)
Q Consensus 155 ~~~~sp~g~---~l~t~~~d~~i~iwd~~~~~~~~~~ 188 (378)
...+..+|+ .++.++.+|.++++|..+|+++...
T Consensus 304 ~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 304 LAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAE 340 (668)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred EEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccc
Confidence 333334665 6888899999999999999987433
No 243
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.42 E-value=7.9e-05 Score=61.45 Aligned_cols=139 Identities=17% Similarity=0.092 Sum_probs=96.6
Q ss_pred ceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEE-eCCCcEEEEeC-CCCeEEeeccCCCeeEEEE---EEEEEe
Q 046394 25 AIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAA-GCKGYPYFYNR-DGTELHCSKEHGEVLKLQF---LLASIN 99 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~-~~dg~i~iwd~-~~~~~~~~~~~~~~~~l~~---~l~s~~ 99 (378)
..|+.+|+.+++....+... ..++.....+.+..|... -.++.+.+||. +...+.++........+++ .|+.+.
T Consensus 43 S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vSd 121 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVP-PPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGWALTSDDSHLYMSD 121 (243)
T ss_dssp CEEEEEETTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCCEEEECSSCEEEEC
T ss_pred ceEEEEECCCCCEEEEEeCC-CCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEEeeCCCEEEEEC
Confidence 48999999999998888765 344444334445555544 45889999994 6677777765544477777 444445
Q ss_pred CCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecCCCEEEEEEecCCCEEEEEECCCeEEEEEc
Q 046394 100 KLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDL 179 (378)
Q Consensus 100 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~ 179 (378)
.++.|.++|..+.+.+.++...... .--..++.+.|. +|..++..-.+..|.+.|.
T Consensus 122 gs~~l~~iDp~t~~~~~~I~V~~~g-----------------------~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp 177 (243)
T 3mbr_X 122 GTAVIRKLDPDTLQQVGSIKVTAGG-----------------------RPLDNLNELEWV-NGELLANVWLTSRIARIDP 177 (243)
T ss_dssp SSSEEEEECTTTCCEEEEEECEETT-----------------------EECCCEEEEEEE-TTEEEEEETTTTEEEEECT
T ss_pred CCCeEEEEeCCCCeEEEEEEEccCC-----------------------cccccceeeEEe-CCEEEEEECCCCeEEEEEC
Confidence 5889999999999988877632110 011234556665 6766666667889999999
Q ss_pred CCceeeeee
Q 046394 180 RKYEVLQTL 188 (378)
Q Consensus 180 ~~~~~~~~~ 188 (378)
.+++.+..+
T Consensus 178 ~tG~V~~~i 186 (243)
T 3mbr_X 178 ASGKVVAWI 186 (243)
T ss_dssp TTCBEEEEE
T ss_pred CCCCEEEEE
Confidence 999988876
No 244
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.41 E-value=3.4e-05 Score=74.99 Aligned_cols=173 Identities=10% Similarity=0.088 Sum_probs=104.6
Q ss_pred ceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCc-------------EEEEeCCCC---eEEee--cc-C
Q 046394 25 AIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGY-------------PYFYNRDGT---ELHCS--KE-H 85 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~-------------i~iwd~~~~---~~~~~--~~-~ 85 (378)
..|+++|+.+++.+.. ..+.....+++|+ ||+.|+.++.+.. |++|++... ....+ .. |
T Consensus 155 ~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~ 232 (693)
T 3iuj_A 155 REIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ 232 (693)
T ss_dssp EEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGG
T ss_pred EEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCC
Confidence 5799999999886432 2211113578999 9999998887743 999995332 12223 33 3
Q ss_pred CC-eeEEEE------EEEEEeC---CCeEEEEEcCCCc-EEEEEecCCCCeeEEEEcCCCCEEEE-EcCCCe--------
Q 046394 86 GE-VLKLQF------LLASINK---LGQLRYQNVTMGE-IVGNFWTGLGRTDVIRVNPFNGVVSL-GHSGGT-------- 145 (378)
Q Consensus 86 ~~-~~~l~~------~l~s~~~---d~~i~iwd~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~d~~-------- 145 (378)
.. ...+.| ++++.+. ++.|.++|+.++. ....+..+....... ++++|..|+. +..++.
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d 311 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVD 311 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEE
T ss_pred CeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEe
Confidence 33 366677 4444432 3589999998763 344555554444444 6666654443 333321
Q ss_pred -----------eeecCCCEEEEEEecCCCEEEEEECCC---eEEEEEcCCceeeeee--c--CCceEEEEecCCCc
Q 046394 146 -----------MLCHQGPVSALAFHPNGHLMATSGKDC---KIKIWDLRKYEVLQTL--P--GHAKTLDFSRKDSG 203 (378)
Q Consensus 146 -----------~~~h~~~v~~~~~sp~g~~l~t~~~d~---~i~iwd~~~~~~~~~~--~--~~i~~~~~sp~g~~ 203 (378)
+..|...+. .|+|++++|+....++ .|.+||+..+. ...+ + +.+..+.++|++..
T Consensus 312 ~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~ 384 (693)
T 3iuj_A 312 AANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPA 384 (693)
T ss_dssp TTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSC
T ss_pred CCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCE
Confidence 344555554 8999998887766544 68999987543 3444 2 34556667777664
No 245
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.37 E-value=5.1e-08 Score=87.30 Aligned_cols=131 Identities=15% Similarity=0.113 Sum_probs=70.7
Q ss_pred CCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCeeE-EEE----EEEEEeCCCeEEEEEcCCCcEEEEEecCCC-Cee-E
Q 046394 56 SGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEVLK-LQF----LLASINKLGQLRYQNVTMGEIVGNFWTGLG-RTD-V 127 (378)
Q Consensus 56 ~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~~~-l~~----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~-~ 127 (378)
++..+++++.||.|+.|| .+|+.+..+.. ..+.+ ... .+++++.|+.|+.||..+|+.+..+..+.. .+. .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 467899999999999999 68888888776 33322 222 566668999999999999887666543211 000 0
Q ss_pred EEEcCCCCEEEEEcCCCeeee---cCCC-------EEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee
Q 046394 128 IRVNPFNGVVSLGHSGGTMLC---HQGP-------VSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188 (378)
Q Consensus 128 ~~~s~~~~~l~~~~~d~~~~~---h~~~-------v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~ 188 (378)
..+. ++..+++++.++.+.. ..+. -....++|++..+++++.|+.|+.||..+|+.+..+
T Consensus 87 p~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 87 PCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp SCC------CCCCEEEEEEEEECCC----------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred ceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCcccccccCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence 0111 2334444444443100 0000 012456778888999999999999999999886655
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.37 E-value=0.00032 Score=57.83 Aligned_cols=165 Identities=10% Similarity=0.030 Sum_probs=105.5
Q ss_pred eEEeecCCCC--ceEEEEcCCCCEEEEEeCCC--cEEEEe-CCCCeEEeeccCCCe--eEEEE----EEEEEeCCCeEEE
Q 046394 38 QYDIMLPELG--PYTLDFTSSGRYMAAAGCKG--YPYFYN-RDGTELHCSKEHGEV--LKLQF----LLASINKLGQLRY 106 (378)
Q Consensus 38 ~~~l~~~~~~--v~~~~~sp~g~~l~~~~~dg--~i~iwd-~~~~~~~~~~~~~~~--~~l~~----~l~s~~~d~~i~i 106 (378)
+..+ .|+.. ...+.|++ +.++.+.+.+| .|+++| .+++.+..+.-.... -.+.+ +++....++.+.+
T Consensus 12 ~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v 89 (243)
T 3mbr_X 12 VKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFV 89 (243)
T ss_dssp EEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEE
T ss_pred EEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEE
Confidence 4444 44433 45899986 55555555544 899999 567777766554443 44555 5555667899999
Q ss_pred EEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeee
Q 046394 107 QNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQ 186 (378)
Q Consensus 107 wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~ 186 (378)
||..+.+.+.++... + .+ ..+ ++++..|+.+..++.|.++|..+.+.+.
T Consensus 90 ~D~~tl~~~~ti~~~--------------------------~-~G--wgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~ 138 (243)
T 3mbr_X 90 YDLATLTPRARFRYP--------------------------G-EG--WAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVG 138 (243)
T ss_dssp EETTTTEEEEEEECS--------------------------S-CC--CEE--EECSSCEEEECSSSEEEEECTTTCCEEE
T ss_pred EECCcCcEEEEEeCC--------------------------C-Cc--eEE--eeCCCEEEEECCCCeEEEEeCCCCeEEE
Confidence 999999999998742 1 11 223 3556666665668899999999988887
Q ss_pred ee--c------CCceEEEEecCCCc----------cccCCCCCceEEEeecc------------CCcceeeeEEcCCCCe
Q 046394 187 TL--P------GHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSMV------------KGYQIGKVSFRPYEDV 236 (378)
Q Consensus 187 ~~--~------~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~~------------~~~~v~~~~~sp~g~~ 236 (378)
++ . ..++.+.|. +|.. .+.+..++..+..+... .....+.++|+|++..
T Consensus 139 ~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~ 217 (243)
T 3mbr_X 139 SIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDR 217 (243)
T ss_dssp EEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTE
T ss_pred EEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCE
Confidence 77 1 244556655 4442 33345566665555421 1235678899987753
No 247
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.37 E-value=1.5e-05 Score=74.10 Aligned_cols=181 Identities=8% Similarity=-0.000 Sum_probs=116.8
Q ss_pred cceeeeeecccceeeEEeecCC-CCceEEEE-c-CCCCEEEEEe------------------CCCcEEEEeCC-CCeEEe
Q 046394 24 EAIAREVDILSSRNQYDIMLPE-LGPYTLDF-T-SSGRYMAAAG------------------CKGYPYFYNRD-GTELHC 81 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~-~~v~~~~~-s-p~g~~l~~~~------------------~dg~i~iwd~~-~~~~~~ 81 (378)
+..|.+.|+.+.+....+.... ..+..+++ + |++.++++++ .++.+.+.|.. ...+..
T Consensus 111 ~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~q 190 (595)
T 1fwx_A 111 NTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQ 190 (595)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEE
Confidence 5779999999999877555432 56889998 5 9999998885 24578888844 344444
Q ss_pred eccCCCeeEEEE------EEEEEeCC-------------------------------------CeEEEEEcCC--CcE-E
Q 046394 82 SKEHGEVLKLQF------LLASINKL-------------------------------------GQLRYQNVTM--GEI-V 115 (378)
Q Consensus 82 ~~~~~~~~~l~~------~l~s~~~d-------------------------------------~~i~iwd~~~--~~~-~ 115 (378)
+.-...+..+++ .++++..+ +.|.+.|..+ ++. +
T Consensus 191 I~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~ 270 (595)
T 1fwx_A 191 VLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFT 270 (595)
T ss_dssp EEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSE
T ss_pred EEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeE
Confidence 432122222222 22222111 2477888877 544 4
Q ss_pred EEEecCCCCeeEEEEcCCCCEEEEEcCCCe------ee-----------------e---cCCCEEEEEEecCCCEEEEEE
Q 046394 116 GNFWTGLGRTDVIRVNPFNGVVSLGHSGGT------ML-----------------C---HQGPVSALAFHPNGHLMATSG 169 (378)
Q Consensus 116 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~------~~-----------------~---h~~~v~~~~~sp~g~~l~t~~ 169 (378)
..+.. .....++.++|||+++++++.... +. . -......++|+|+|+..++.-
T Consensus 271 ~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ 349 (595)
T 1fwx_A 271 RYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLF 349 (595)
T ss_dssp EEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEET
T ss_pred EEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEe
Confidence 55543 246788999999998888775544 11 0 113567899999995456677
Q ss_pred CCCeEEEEEcCC----------ceeeeee--cCCc------eEEEEecCCCccc
Q 046394 170 KDCKIKIWDLRK----------YEVLQTL--PGHA------KTLDFSRKDSGDF 205 (378)
Q Consensus 170 ~d~~i~iwd~~~----------~~~~~~~--~~~i------~~~~~sp~g~~~~ 205 (378)
.|++|.+||+.+ ...+.++ +..+ ..++++|||++.+
T Consensus 350 ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~ 403 (595)
T 1fwx_A 350 LDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLV 403 (595)
T ss_dssp TTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEE
T ss_pred cCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEE
Confidence 899999999977 4456666 3222 2335678888743
No 248
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.29 E-value=0.00021 Score=59.52 Aligned_cols=165 Identities=8% Similarity=0.001 Sum_probs=107.8
Q ss_pred eEEeecCCCCc--eEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccCCCe--eEEEE----EEEEEeCCCeEEEEE
Q 046394 38 QYDIMLPELGP--YTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEHGEV--LKLQF----LLASINKLGQLRYQN 108 (378)
Q Consensus 38 ~~~l~~~~~~v--~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~--~~l~~----~l~s~~~d~~i~iwd 108 (378)
+..+ .|+... ..+.|+. +.+..+.+.+|.|+++| .+++.+..+ -.... -.+.+ +++....++.+.+||
T Consensus 46 v~~~-phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D 122 (268)
T 3nok_A 46 IREY-PHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWS 122 (268)
T ss_dssp EEEE-ECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEE
T ss_pred EEEE-cCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEE
Confidence 3344 444433 5888873 55666777788999999 566666665 33333 44666 556666789999999
Q ss_pred cCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee
Q 046394 109 VTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188 (378)
Q Consensus 109 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~ 188 (378)
..+.+.+.++... ++ + ..+++++..|+.+..++.|.++|..+.+.+.++
T Consensus 123 ~~Tl~~~~ti~~~--------------------------~e-G----wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I 171 (268)
T 3nok_A 123 GMPPQRERTTRYS--------------------------GE-G----WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAV 171 (268)
T ss_dssp TTTTEEEEEEECS--------------------------SC-C----CCEEEETTEEEEECSSSEEEEECTTTCCEEEEE
T ss_pred CCcCcEEEEEeCC--------------------------Cc-e----eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEE
Confidence 9999999998742 11 1 123356777777777889999999999888877
Q ss_pred --c------CCceEEEEecCCCc----------cccCCCCCceEEEeecc------------CCcceeeeEEcCCCCeE
Q 046394 189 --P------GHAKTLDFSRKDSG----------DFSGSHNYNRYMGYSMV------------KGYQIGKVSFRPYEDVL 237 (378)
Q Consensus 189 --~------~~i~~~~~sp~g~~----------~~~~~~~~~~~~~~~~~------------~~~~v~~~~~sp~g~~l 237 (378)
. ..++.+.|. +|.. .+.+..++..+..+... .....+.++|+|++..|
T Consensus 172 ~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rl 249 (268)
T 3nok_A 172 QVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRI 249 (268)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCE
T ss_pred EeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEE
Confidence 1 234666766 5543 33345555555555431 12356789999976533
No 249
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.29 E-value=0.00037 Score=60.76 Aligned_cols=164 Identities=13% Similarity=0.069 Sum_probs=101.3
Q ss_pred eecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccC---------------------CCeeEEEE-----E
Q 046394 41 IMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEH---------------------GEVLKLQF-----L 94 (378)
Q Consensus 41 l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------------------~~~~~l~~-----~ 94 (378)
+.+.-..+.+++|+++|++++++..++.|..|+..+..+..+... ..+..+++ .
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~ 93 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ 93 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc
Confidence 443334677899999998788888899999999766544433210 12456666 4
Q ss_pred EEEEeCCCeEEEEEcCCCcEEEEEec-----CCCCeeEEEEcC-CCCEEEEEcCC-----------------Ce---eee
Q 046394 95 LASINKLGQLRYQNVTMGEIVGNFWT-----GLGRTDVIRVNP-FNGVVSLGHSG-----------------GT---MLC 148 (378)
Q Consensus 95 l~s~~~d~~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~s~-~~~~l~~~~~d-----------------~~---~~~ 148 (378)
|+.+...+.|..+|..++.. ..+.. ....++.+++.+ +|.++++.... +. +..
T Consensus 94 l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 172 (322)
T 2fp8_A 94 LYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP 172 (322)
T ss_dssp EEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET
T ss_pred EEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeC
Confidence 55554455588888765532 22211 123578899999 99877664331 21 111
Q ss_pred ----------cCCCEEEEEEecCCCEEEEE-ECCCeEEEEEcCCc---e--eeeeecCCceEEEEecCCCcccc
Q 046394 149 ----------HQGPVSALAFHPNGHLMATS-GKDCKIKIWDLRKY---E--VLQTLPGHAKTLDFSRKDSGDFS 206 (378)
Q Consensus 149 ----------h~~~v~~~~~sp~g~~l~t~-~~d~~i~iwd~~~~---~--~~~~~~~~i~~~~~sp~g~~~~~ 206 (378)
.......++|+|+|++|..+ +..+.|.+||+... . .+..+.+ ...+++.++|.+.+.
T Consensus 173 ~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va 245 (322)
T 2fp8_A 173 STKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVS 245 (322)
T ss_dssp TTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEE
T ss_pred CCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEE
Confidence 11234578999999866554 56689999998742 1 1112234 778889998865433
No 250
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.27 E-value=0.00041 Score=65.76 Aligned_cols=172 Identities=10% Similarity=0.043 Sum_probs=111.9
Q ss_pred eeeEEEec-cceeeeeec-ccceeeEEeecCCCC-----------ceEEEEcCCCCE----EEEEeCCCcEEEEe-CCCC
Q 046394 16 EKTWRIKQ-EAIAREVDI-LSSRNQYDIMLPELG-----------PYTLDFTSSGRY----MAAAGCKGYPYFYN-RDGT 77 (378)
Q Consensus 16 ~~~~~~~~-~~~i~~~d~-~~~~~~~~l~~~~~~-----------v~~~~~sp~g~~----l~~~~~dg~i~iwd-~~~~ 77 (378)
+..|.... ++.|..+|. .+++.+......... ...++++|.+.. |++++.|+.|..+| .+|+
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCC
Confidence 45566666 688999999 899999888654321 123566544444 88888899999999 6888
Q ss_pred eEEeeccCC-----Ce-eE-EEE--EEEEEe------CCCeEEEEEcCCCcEEEEEecCCCC------------------
Q 046394 78 ELHCSKEHG-----EV-LK-LQF--LLASIN------KLGQLRYQNVTMGEIVGNFWTGLGR------------------ 124 (378)
Q Consensus 78 ~~~~~~~~~-----~~-~~-l~~--~l~s~~------~d~~i~iwd~~~~~~~~~~~~~~~~------------------ 124 (378)
.+....... .+ .. +.. .++.++ .++.|+.+|..+|+.+..+......
T Consensus 143 ~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~ 222 (599)
T 1w6s_A 143 TVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQ 222 (599)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccc
Confidence 887654332 22 22 223 445444 3799999999999998887643211
Q ss_pred -------------------e-eEEEEcCCCCEEEEEcCCC----------------e----------------eeec---
Q 046394 125 -------------------T-DVIRVNPFNGVVSLGHSGG----------------T----------------MLCH--- 149 (378)
Q Consensus 125 -------------------v-~~~~~s~~~~~l~~~~~d~----------------~----------------~~~h--- 149 (378)
+ ..+++.+....++.++.++ . ...|
T Consensus 223 ~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~w 302 (599)
T 1w6s_A 223 KGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEW 302 (599)
T ss_dssp TTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccc
Confidence 0 1356667777777776553 1 1111
Q ss_pred -----CCCEEEEEEe-cCC---CEEEEEECCCeEEEEEcCCceeeeee
Q 046394 150 -----QGPVSALAFH-PNG---HLMATSGKDCKIKIWDLRKYEVLQTL 188 (378)
Q Consensus 150 -----~~~v~~~~~s-p~g---~~l~t~~~d~~i~iwd~~~~~~~~~~ 188 (378)
..++. +... .+| ..++.++.+|.+.++|..+|+++...
T Consensus 303 d~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 303 DYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp CCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 11221 2222 467 46777889999999999999987655
No 251
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.24 E-value=0.00071 Score=56.47 Aligned_cols=103 Identities=5% Similarity=-0.065 Sum_probs=66.3
Q ss_pred EeecCCCCceEEEEcCCCCEEE-EEeCCCcEEEEeCCCCeEEeec--cCCCeeEEEE-----EEEEEeCCCeEEEEEcCC
Q 046394 40 DIMLPELGPYTLDFTSSGRYMA-AAGCKGYPYFYNRDGTELHCSK--EHGEVLKLQF-----LLASINKLGQLRYQNVTM 111 (378)
Q Consensus 40 ~l~~~~~~v~~~~~sp~g~~l~-~~~~dg~i~iwd~~~~~~~~~~--~~~~~~~l~~-----~l~s~~~d~~i~iwd~~~ 111 (378)
.+.+-...+..++|+|++..|+ +...++.|...|.++..+..+. +..+.-.+++ ++++.-.++.+.++++..
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 3445556799999999876554 5677889999998888887763 3345577777 545555678899998865
Q ss_pred CcE---EEEEec------CCCCeeEEEEcCCCCEEEEEcC
Q 046394 112 GEI---VGNFWT------GLGRTDVIRVNPFNGVVSLGHS 142 (378)
Q Consensus 112 ~~~---~~~~~~------~~~~v~~~~~s~~~~~l~~~~~ 142 (378)
... +..... .......++|+|.+..|+++..
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E 140 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKE 140 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEE
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEEC
Confidence 432 222221 1233466777776655554443
No 252
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.16 E-value=0.00086 Score=63.41 Aligned_cols=103 Identities=6% Similarity=0.015 Sum_probs=70.4
Q ss_pred eeeEEEec-cceeeeeec-ccceeeEEeecCCCC-c----------eEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEe
Q 046394 16 EKTWRIKQ-EAIAREVDI-LSSRNQYDIMLPELG-P----------YTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHC 81 (378)
Q Consensus 16 ~~~~~~~~-~~~i~~~d~-~~~~~~~~l~~~~~~-v----------~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~ 81 (378)
+..|.... ++.+..+|. .+++.++........ + ..+++ .+..+++++.|+.|..+| .+|+.+..
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~ 140 (571)
T 2ad6_A 63 DMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINWE 140 (571)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEEE
Confidence 44566666 688999999 899998887654221 0 12233 255788888899999999 57888876
Q ss_pred eccCC-----Ce-eE-EEE--EEEEEeC------CCeEEEEEcCCCcEEEEEec
Q 046394 82 SKEHG-----EV-LK-LQF--LLASINK------LGQLRYQNVTMGEIVGNFWT 120 (378)
Q Consensus 82 ~~~~~-----~~-~~-l~~--~l~s~~~------d~~i~iwd~~~~~~~~~~~~ 120 (378)
..... .+ .. +.. .++.++. ++.|..+|..+|+.+..+..
T Consensus 141 ~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 141 VEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp EECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 54322 22 22 223 4555544 79999999999999887764
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.15 E-value=0.003 Score=54.53 Aligned_cols=171 Identities=10% Similarity=-0.021 Sum_probs=99.6
Q ss_pred ccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccCCCeeEEEE-----EEEEEe-CCC-eEE
Q 046394 33 LSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEVLKLQF-----LLASIN-KLG-QLR 105 (378)
Q Consensus 33 ~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~l~~-----~l~s~~-~d~-~i~ 105 (378)
.+.+.+..+... ..+.+++|+|+|+++++-..++.|..||..+.....+.....+..+++ ++++.. .++ .|.
T Consensus 20 ~~~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~ 98 (306)
T 2p4o_A 20 APAKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVV 98 (306)
T ss_dssp CCEEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEE
Confidence 334455556543 567899999999866666678899999987766554443334578888 444432 333 577
Q ss_pred EEEcCCCcEEEEEec-CCCCeeEEEEcCCCCEEEEEcCCCe---eee---------------------cCCCEEEEEEec
Q 046394 106 YQNVTMGEIVGNFWT-GLGRTDVIRVNPFNGVVSLGHSGGT---MLC---------------------HQGPVSALAFHP 160 (378)
Q Consensus 106 iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~---~~~---------------------h~~~v~~~~~sp 160 (378)
.+|..+++....... .......++..+++..+++-...+. +.. .-.....+ +|
T Consensus 99 ~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~ 176 (306)
T 2p4o_A 99 SLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR 176 (306)
T ss_dssp EEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE
T ss_pred EEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--Cc
Confidence 778777775433322 1223344554444443443333333 100 00123445 78
Q ss_pred CCCEEE-EEECCCeEEEEEcCC-cee--eeee--cCCceEEEEecCCCcccc
Q 046394 161 NGHLMA-TSGKDCKIKIWDLRK-YEV--LQTL--PGHAKTLDFSRKDSGDFS 206 (378)
Q Consensus 161 ~g~~l~-t~~~d~~i~iwd~~~-~~~--~~~~--~~~i~~~~~sp~g~~~~~ 206 (378)
++.+|. +-+..+.|..||+.. +.. ...+ ......++++++|.+.+.
T Consensus 177 dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va 228 (306)
T 2p4o_A 177 FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGA 228 (306)
T ss_dssp ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEE
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEE
Confidence 887654 455678999999874 432 2222 245678899999875333
No 254
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.15 E-value=0.0023 Score=57.25 Aligned_cols=165 Identities=15% Similarity=0.078 Sum_probs=101.3
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEeecc--CCCeeEEE
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAG-CKGYPYFYNRDGTELHCSKE--HGEVLKLQ 92 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~--~~~~~~l~ 92 (378)
+..+.+.....|+.+++........+.. ...+..++|++.+..|+.+. ..+.|..++.++.....+.. ...+..++
T Consensus 87 ~~~l~~~~~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~gla 165 (386)
T 3v65_B 87 EPVLLFANRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLA 165 (386)
T ss_dssp CCEEEEECBSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEE
T ss_pred cceeEeecCccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEE
Confidence 3445556667778888876654444433 35688999998766666554 46789999987765544322 22334454
Q ss_pred E------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCC--e-------------e-eecC
Q 046394 93 F------LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGG--T-------------M-LCHQ 150 (378)
Q Consensus 93 ~------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~--~-------------~-~~h~ 150 (378)
+ ++++-...+.|.+.++........+.........++++|.+..|+.+.... . + ...-
T Consensus 166 vd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~ 245 (386)
T 3v65_B 166 VDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHL 245 (386)
T ss_dssp EETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSC
T ss_pred EEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCC
Confidence 4 555666677888888864443333333446778899998776555544332 2 1 1122
Q ss_pred CCEEEEEEecCCCEE-EEEECCCeEEEEEcCC
Q 046394 151 GPVSALAFHPNGHLM-ATSGKDCKIKIWDLRK 181 (378)
Q Consensus 151 ~~v~~~~~sp~g~~l-~t~~~d~~i~iwd~~~ 181 (378)
.....|+|+|++..| ++-+..+.|..+|+..
T Consensus 246 ~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 246 FWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp SCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred CCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 346788898755544 4444566788888753
No 255
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.15 E-value=0.0035 Score=55.24 Aligned_cols=165 Identities=15% Similarity=0.081 Sum_probs=102.0
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEeecc--CCCeeEEE
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAG-CKGYPYFYNRDGTELHCSKE--HGEVLKLQ 92 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~--~~~~~~l~ 92 (378)
+..+.+.....|+..++........+.. ...+..++|++.+..|+.+. ..+.|..++.++.....+.. ...+..++
T Consensus 44 ~~~ll~~~~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~gla 122 (349)
T 3v64_C 44 EPVLLFANRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLA 122 (349)
T ss_dssp CCEEEEECBSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred CceeEeecccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEE
Confidence 4445556666777777766544333333 35688999998776666554 46789999977765444322 22335555
Q ss_pred E------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCC--e-------------e-eecC
Q 046394 93 F------LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGG--T-------------M-LCHQ 150 (378)
Q Consensus 93 ~------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~--~-------------~-~~h~ 150 (378)
+ ++++-...+.|.+.++........+.........++++|.+..|+.+.... . + ...-
T Consensus 123 vd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~ 202 (349)
T 3v64_C 123 VDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHL 202 (349)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSC
T ss_pred EecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCC
Confidence 5 556666678899999865443333333446778999999766555444322 2 1 1122
Q ss_pred CCEEEEEEecCCCEEE-EEECCCeEEEEEcCC
Q 046394 151 GPVSALAFHPNGHLMA-TSGKDCKIKIWDLRK 181 (378)
Q Consensus 151 ~~v~~~~~sp~g~~l~-t~~~d~~i~iwd~~~ 181 (378)
.....|+++|++..|. +-+..+.|..+|+..
T Consensus 203 ~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 203 FWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 3467899998655554 444567888888754
No 256
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.11 E-value=0.00011 Score=61.74 Aligned_cols=147 Identities=11% Similarity=0.029 Sum_probs=95.3
Q ss_pred eEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeC-CCCeEEeeccCC------CeeE
Q 046394 18 TWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNR-DGTELHCSKEHG------EVLK 90 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~-~~~~~~~~~~~~------~~~~ 90 (378)
.+.-|.++.+.++|..+.+.+..+... ....+.+++||..|+++..++.|.++|. +...+..+.-.. .++.
T Consensus 79 yv~t~~~~~v~viD~~t~~v~~~i~~g--~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 79 YQVVWLKNIGFIYDRRTLSNIKNFTHQ--MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp EEEETTCSEEEEEETTTTEEEEEEECC--SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred EEEEecCCEEEEEECCCCcEEEEEECC--CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccccccee
Confidence 334466899999999999998888654 1223446678887777777889999995 445555544221 2356
Q ss_pred EEE----EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecCCCEEEEEEecCCCE-E
Q 046394 91 LQF----LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHL-M 165 (378)
Q Consensus 91 l~~----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~v~~~~~sp~g~~-l 165 (378)
+.| +++....++.|.+.|..+++.+..+.........+ . .. ..-......|+|+|+++. +
T Consensus 157 le~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~--~-~~------------~~~~~v~nGIa~~~~~~~lf 221 (266)
T 2iwa_A 157 LEYINGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLI--D-EG------------FRDIDVLNGIAWDQENKRIF 221 (266)
T ss_dssp EEEETTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHH--H-TT------------CTTCCCEEEEEEETTTTEEE
T ss_pred EEEECCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccc--c-cc------------ccccCceEEEEEcCCCCEEE
Confidence 777 55666668899999999999988876310000000 0 00 001134578899998765 5
Q ss_pred EEEECCCeEEEEEcCC
Q 046394 166 ATSGKDCKIKIWDLRK 181 (378)
Q Consensus 166 ~t~~~d~~i~iwd~~~ 181 (378)
+|+...+.|.+.++..
T Consensus 222 VTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 222 VTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEETTCSEEEEEEEEE
T ss_pred EECCCCCeEEEEEEec
Confidence 5666777888887754
No 257
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.98 E-value=0.0026 Score=57.87 Aligned_cols=126 Identities=13% Similarity=0.029 Sum_probs=76.8
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCC-C----cEEEEeCCCCeE--EeeccCCCe
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCK-G----YPYFYNRDGTEL--HCSKEHGEV 88 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~d-g----~i~iwd~~~~~~--~~~~~~~~~ 88 (378)
...|.....+.|..+|+.++.... +......+..|+|+++|++|+++... + .+.+++..+... ..+.....+
T Consensus 150 g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p 228 (430)
T 3tc9_A 150 NHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNC 228 (430)
T ss_dssp EEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSC
T ss_pred CeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCc
Confidence 444444444778888887765433 33344668899999999977766542 2 344455444322 233333344
Q ss_pred eEEEE------EEEEEeCCCeEEEEEcCCCcEEEEEec-CCCCeeEEEEcCCCCEEEEEcC
Q 046394 89 LKLQF------LLASINKLGQLRYQNVTMGEIVGNFWT-GLGRTDVIRVNPFNGVVSLGHS 142 (378)
Q Consensus 89 ~~l~~------~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~ 142 (378)
..+++ ++++-..++.|..++...+.....+.. .......++|+|++++|+++..
T Consensus 229 ~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 229 NGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 55666 556666678899999876654333322 2245778999999996665543
No 258
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.95 E-value=0.0086 Score=52.73 Aligned_cols=159 Identities=11% Similarity=-0.001 Sum_probs=96.9
Q ss_pred CCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEee-ccCCCeeEEEE------EEEEEeCCCeEEEEEcCCCcEEEE
Q 046394 45 ELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCS-KEHGEVLKLQF------LLASINKLGQLRYQNVTMGEIVGN 117 (378)
Q Consensus 45 ~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~l~~------~l~s~~~d~~i~iwd~~~~~~~~~ 117 (378)
.....|.+..+++ +|+.+. ...|+..+..+.....+ .....+..++| ++.+-...+.|..+++..+.....
T Consensus 33 ~d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~ 110 (349)
T 3v64_C 33 PDRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV 110 (349)
T ss_dssp TTSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred CCCCcccccccCc-eeEeec-ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEE
Confidence 3455677766643 555543 34688888777554443 34444577887 555555678899999876654444
Q ss_pred EecCCCCeeEEEEcCCCCEEEEE-cCCCe--------------eeecCCCEEEEEEecCCCE-EEEEECC-CeEEEEEcC
Q 046394 118 FWTGLGRTDVIRVNPFNGVVSLG-HSGGT--------------MLCHQGPVSALAFHPNGHL-MATSGKD-CKIKIWDLR 180 (378)
Q Consensus 118 ~~~~~~~v~~~~~s~~~~~l~~~-~~d~~--------------~~~h~~~v~~~~~sp~g~~-l~t~~~d-~~i~iwd~~ 180 (378)
+.........+++.+.+..|+.+ ...+. +...-.....++++|.+.. +++-... +.|..+++.
T Consensus 111 ~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 111 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 43344566789998865544333 32222 1122345788999995544 4554455 788888876
Q ss_pred Cceeeeee----cCCceEEEEecCCCcccc
Q 046394 181 KYEVLQTL----PGHAKTLDFSRKDSGDFS 206 (378)
Q Consensus 181 ~~~~~~~~----~~~i~~~~~sp~g~~~~~ 206 (378)
. .....+ -...+.++|+|++....|
T Consensus 191 G-~~~~~~~~~~~~~PnGla~d~~~~~lY~ 219 (349)
T 3v64_C 191 G-SGRRIIADTHLFWPNGLTIDYAGRRMYW 219 (349)
T ss_dssp S-CSCEESCCSSCSCEEEEEEETTTTEEEE
T ss_pred C-CCcEEEEECCCCCcceEEEeCCCCEEEE
Confidence 4 333333 245789999987765444
No 259
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.94 E-value=0.00095 Score=64.44 Aligned_cols=96 Identities=9% Similarity=0.042 Sum_probs=69.4
Q ss_pred cceeeeeecccceeeEEeecCCC-------------------------------CceEEEEcCCCCEEEEEeCCC-----
Q 046394 24 EAIAREVDILSSRNQYDIMLPEL-------------------------------GPYTLDFTSSGRYMAAAGCKG----- 67 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~~-------------------------------~v~~~~~sp~g~~l~~~~~dg----- 67 (378)
++.|..+|..+++.++.+..... ....++++|++..+++++.++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 47899999999999988763210 012478888888888887766
Q ss_pred --------------cEEEEe-CCCCeEEeeccC--C-------C-e--eEEEE------EEEEEeCCCeEEEEEcCCCcE
Q 046394 68 --------------YPYFYN-RDGTELHCSKEH--G-------E-V--LKLQF------LLASINKLGQLRYQNVTMGEI 114 (378)
Q Consensus 68 --------------~i~iwd-~~~~~~~~~~~~--~-------~-~--~~l~~------~l~s~~~d~~i~iwd~~~~~~ 114 (378)
.|..+| .+|..+..+... . . . ..+.+ .++.++.+|.++++|..+|+.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 399999 678888776542 1 1 1 22223 478888999999999999998
Q ss_pred EEEEe
Q 046394 115 VGNFW 119 (378)
Q Consensus 115 ~~~~~ 119 (378)
+....
T Consensus 337 l~~~~ 341 (668)
T 1kv9_A 337 ISAEK 341 (668)
T ss_dssp EEEEE
T ss_pred ecccc
Confidence 85544
No 260
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.91 E-value=0.0099 Score=53.14 Aligned_cols=157 Identities=11% Similarity=0.019 Sum_probs=94.3
Q ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEe-eccCCCeeEEEE------EEEEEeCCCeEEEEEcCCCcEEEEEe
Q 046394 47 GPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHC-SKEHGEVLKLQF------LLASINKLGQLRYQNVTMGEIVGNFW 119 (378)
Q Consensus 47 ~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~l~~------~l~s~~~d~~i~iwd~~~~~~~~~~~ 119 (378)
.-.|.+..+. .+|+.+. ...|+.++..+..... +.....+..++| ++++-...+.|..+++..+.....+.
T Consensus 78 ~~~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 78 RRSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 155 (386)
T ss_dssp SSCEEECSSC-CEEEEEC-BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred CCeECCcccc-ceeEeec-CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence 3445555553 3455443 3578888976654443 334445578888 55555667889999987665444444
Q ss_pred cCCCCeeEEEEcCCCCEEEEE-cCCCe--------------eeecCCCEEEEEEecCCCEEE-EEECC-CeEEEEEcCCc
Q 046394 120 TGLGRTDVIRVNPFNGVVSLG-HSGGT--------------MLCHQGPVSALAFHPNGHLMA-TSGKD-CKIKIWDLRKY 182 (378)
Q Consensus 120 ~~~~~v~~~~~s~~~~~l~~~-~~d~~--------------~~~h~~~v~~~~~sp~g~~l~-t~~~d-~~i~iwd~~~~ 182 (378)
........+++++.+..|+.+ ...+. +...-.....++++|.+.+|. +-... +.|..+++..
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG- 234 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG- 234 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-
T ss_pred CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC-
Confidence 344566788998866544433 32222 112234578899999655544 44444 6888888754
Q ss_pred eeeeee----cCCceEEEEecCCCcccc
Q 046394 183 EVLQTL----PGHAKTLDFSRKDSGDFS 206 (378)
Q Consensus 183 ~~~~~~----~~~i~~~~~sp~g~~~~~ 206 (378)
.....+ -...+.|+|+|++....|
T Consensus 235 ~~~~~~~~~~~~~PnGlavd~~~~~lY~ 262 (386)
T 3v65_B 235 SGRRIIADTHLFWPNGLTIDYAGRRMYW 262 (386)
T ss_dssp CSCEEEECSSCSCEEEEEEEGGGTEEEE
T ss_pred CCcEEEEECCCCCeeeEEEeCCCCEEEE
Confidence 333333 245789999987665444
No 261
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.91 E-value=0.0018 Score=61.27 Aligned_cols=97 Identities=9% Similarity=0.027 Sum_probs=65.8
Q ss_pred cceeeeeecccceeeEEeecCCCC-------------------------------------c-eEEEEcCCCCEEEEEeC
Q 046394 24 EAIAREVDILSSRNQYDIMLPELG-------------------------------------P-YTLDFTSSGRYMAAAGC 65 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~~~-------------------------------------v-~~~~~sp~g~~l~~~~~ 65 (378)
++.|..+|..+++.+..+...... + ..+++.++...++.+..
T Consensus 175 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g 254 (571)
T 2ad6_A 175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSG 254 (571)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECC
Confidence 578999999999998887653211 0 13567776667776653
Q ss_pred C----------------CcEEEEe-CCCCeEEeeccCC----------CeeEEE--------EEEEEEeCCCeEEEEEcC
Q 046394 66 K----------------GYPYFYN-RDGTELHCSKEHG----------EVLKLQ--------FLLASINKLGQLRYQNVT 110 (378)
Q Consensus 66 d----------------g~i~iwd-~~~~~~~~~~~~~----------~~~~l~--------~~l~s~~~d~~i~iwd~~ 110 (378)
+ +.|..+| .+|..+..++... .+.-+. ..++.++.+|.+.++|..
T Consensus 255 ~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~ 334 (571)
T 2ad6_A 255 NPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRE 334 (571)
T ss_dssp CCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETT
T ss_pred CCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECC
Confidence 2 2589999 5778777765321 111111 135678889999999999
Q ss_pred CCcEEEEEec
Q 046394 111 MGEIVGNFWT 120 (378)
Q Consensus 111 ~~~~~~~~~~ 120 (378)
+|+.+..+..
T Consensus 335 tG~~~w~~~~ 344 (571)
T 2ad6_A 335 NGNLIVAEKV 344 (571)
T ss_dssp TCCEEEEEES
T ss_pred CCCEEeeecc
Confidence 9998877654
No 262
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.90 E-value=0.023 Score=56.01 Aligned_cols=218 Identities=10% Similarity=-0.012 Sum_probs=128.4
Q ss_pred cceeeeeecccceeeEEeec-------CCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccC---------CC
Q 046394 24 EAIAREVDILSSRNQYDIML-------PELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEH---------GE 87 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~-------~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------~~ 87 (378)
.+-+..||..+++...-... ....|.++...++|.+. .|+.+ -|.+||........+... ..
T Consensus 234 ~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~ 311 (795)
T 4a2l_A 234 GAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLW-IGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRS 311 (795)
T ss_dssp SSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEE-EEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSC
T ss_pred CCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEE-EEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCc
Confidence 33466677766543222111 13468899999988744 44455 589999766555544321 12
Q ss_pred eeEEEE----EEEEEeCCCeEEEEEcCCCcEEEEEec-------CCCCeeEEEEcCCCCEEEEEcCCCe---------ee
Q 046394 88 VLKLQF----LLASINKLGQLRYQNVTMGEIVGNFWT-------GLGRTDVIRVNPFNGVVSLGHSGGT---------ML 147 (378)
Q Consensus 88 ~~~l~~----~l~s~~~d~~i~iwd~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~~~~~d~~---------~~ 147 (378)
+.++.. .+-.|+.++-|..|+..++.... +.. ....|.++...++|.+.+.....|. +.
T Consensus 312 i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~-~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~ 390 (795)
T 4a2l_A 312 VRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKN-IRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFT 390 (795)
T ss_dssp EEEEEECTTSCEEEEESSSCEEEECGGGGSSEE-ECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEE
T ss_pred EEEEEEeCCcCEEEEECCCCeEEeCCCcccceE-EcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEE
Confidence 355555 55566677778899876554322 211 2356889999988876554433344 11
Q ss_pred --e----------cCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee-------cCCceEEEEecCCCccc---
Q 046394 148 --C----------HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL-------PGHAKTLDFSRKDSGDF--- 205 (378)
Q Consensus 148 --~----------h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~-------~~~i~~~~~sp~g~~~~--- 205 (378)
. ....|.++...++|+.|..|+.++-|.+||..+++...-. ...|.++...++|..-+
T Consensus 391 ~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~ 470 (795)
T 4a2l_A 391 SYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL 470 (795)
T ss_dssp EECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES
T ss_pred EEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec
Confidence 0 1356889999899985667777778999999876643321 24577777777776422
Q ss_pred -----cCCCCCceEEEeec------cCCcceeeeEEcCCCCeEEEecCCCeE
Q 046394 206 -----SGSHNYNRYMGYSM------VKGYQIGKVSFRPYEDVLGIGHSMGVS 246 (378)
Q Consensus 206 -----~~~~~~~~~~~~~~------~~~~~v~~~~~sp~g~~l~~~~~~g~~ 246 (378)
++..+.. +..+.. .....|.++...++|.+.+.+. .|..
T Consensus 471 ~Gl~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~ 520 (795)
T 4a2l_A 471 SALVRFNPEQRS-FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLS 520 (795)
T ss_dssp SCEEEEETTTTE-EEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEE
T ss_pred CceeEEeCCCCe-EEEccccccccccCCceEEEEEECCCCCEEEEeC-CceE
Confidence 1211111 111110 0235688888888887766554 5643
No 263
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.80 E-value=0.034 Score=54.82 Aligned_cols=223 Identities=10% Similarity=-0.031 Sum_probs=127.2
Q ss_pred eEEEeccceeeeeecccceeeEEe-ecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeccC---------CC
Q 046394 18 TWRIKQEAIAREVDILSSRNQYDI-MLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEH---------GE 87 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~~~~~~~l-~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------~~ 87 (378)
.+.....+-+..||..+++..... ..+...|.++...++|.+ ..|+.++-+.+||........+... ..
T Consensus 186 lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l-wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~ 264 (795)
T 4a2l_A 186 IYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRI-WVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNY 264 (795)
T ss_dssp EEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEE-EEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSB
T ss_pred EEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCE-EEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCe
Confidence 333333334666776555432211 123456888888887764 4455444599999766555444321 12
Q ss_pred eeEEEE----EEEEEeCCCeEEEEEcCCCcEEEEEec-------CCCCeeEEEEcCCCCEEEEEcCCCe---------e-
Q 046394 88 VLKLQF----LLASINKLGQLRYQNVTMGEIVGNFWT-------GLGRTDVIRVNPFNGVVSLGHSGGT---------M- 146 (378)
Q Consensus 88 ~~~l~~----~l~s~~~d~~i~iwd~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~~~~~d~~---------~- 146 (378)
+.++.. .+..|+.+ -|.+||..++........ ....|.++...++|.+.+.....|. +
T Consensus 265 i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~ 343 (795)
T 4a2l_A 265 IRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFK 343 (795)
T ss_dssp EEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSE
T ss_pred EEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccce
Confidence 355555 44444455 588999877664433211 2356899999999886655544554 1
Q ss_pred -ee--------cCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeee----------e-cCCceEEEEecCCC-ccc
Q 046394 147 -LC--------HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQT----------L-PGHAKTLDFSRKDS-GDF 205 (378)
Q Consensus 147 -~~--------h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~----------~-~~~i~~~~~sp~g~-~~~ 205 (378)
.. ....|.++...++|++ ..|+.++-|..||..++..... + ...|.++...++|. .-+
T Consensus 344 ~~~~~~~~~~l~~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi 422 (795)
T 4a2l_A 344 NIRNIPYKNSLSDNVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI 422 (795)
T ss_dssp EECCCTTSSSCSCSSEEEEEECTTSCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE
T ss_pred EEcCCCCCCCCCCCeeEEEEECCCCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE
Confidence 11 1345899999888874 4567776799999877654322 2 24577888777776 322
Q ss_pred ---------cCCCCCceEEEeec----cCCcceeeeEEcCCCCeEEEecCCCe
Q 046394 206 ---------SGSHNYNRYMGYSM----VKGYQIGKVSFRPYEDVLGIGHSMGV 245 (378)
Q Consensus 206 ---------~~~~~~~~~~~~~~----~~~~~v~~~~~sp~g~~l~~~~~~g~ 245 (378)
++..+.. +..+.. .....|.++...++|.+.+.+. +|.
T Consensus 423 gt~~~Gl~~~d~~~~~-~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl 473 (795)
T 4a2l_A 423 GTHAGGLSILHRNSGQ-VENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SAL 473 (795)
T ss_dssp EETTTEEEEEETTTCC-EEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCE
T ss_pred EeCcCceeEEeCCCCc-EEEeecCCCCcCCCeeEEEEECCCCCEEEEec-Cce
Confidence 1111111 111110 0234688888888887665554 554
No 264
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.78 E-value=0.0071 Score=52.09 Aligned_cols=153 Identities=13% Similarity=0.049 Sum_probs=82.8
Q ss_pred ccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCC--cEEEEeC-CCCeEEeeccC--CC-eeEEEE---
Q 046394 23 QEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKG--YPYFYNR-DGTELHCSKEH--GE-VLKLQF--- 93 (378)
Q Consensus 23 ~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg--~i~iwd~-~~~~~~~~~~~--~~-~~~l~~--- 93 (378)
..+.|..||..... ...+.. ...+.+++++++|+++++..... .|..+|. ++.. ..+... .. ...++.
T Consensus 51 ~~~~I~~~d~~g~~-~~~~~~-~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~-~~~~~~~~~~~~~g~~~~~~ 127 (306)
T 2p4o_A 51 EVGEIVSITPDGNQ-QIHATV-EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV-ETLLTLPDAIFLNGITPLSD 127 (306)
T ss_dssp TTTEEEEECTTCCE-EEEEEC-SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE-EEEEECTTCSCEEEEEESSS
T ss_pred CCCeEEEECCCCce-EEEEeC-CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE-EEEEeCCCccccCcccccCC
Confidence 35667777765432 222222 34688999999999655543322 4777774 4443 322211 11 244443
Q ss_pred --EEEEEeCCCeEEEEEcCCCcE-EEEEe---------cCCCCeeEEEEcCCCCEEEEEcCC-Ce---eeec--------
Q 046394 94 --LLASINKLGQLRYQNVTMGEI-VGNFW---------TGLGRTDVIRVNPFNGVVSLGHSG-GT---MLCH-------- 149 (378)
Q Consensus 94 --~l~s~~~d~~i~iwd~~~~~~-~~~~~---------~~~~~v~~~~~s~~~~~l~~~~~d-~~---~~~h-------- 149 (378)
.+++...++.|..+|..++.. +.... ......+.+ +|++..|+++... +. +...
T Consensus 128 ~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~ 205 (306)
T 2p4o_A 128 TQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEP 205 (306)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCC
T ss_pred CcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCcc
Confidence 344544688999999876532 21111 111234555 7888766655433 22 1100
Q ss_pred -----CCCEEEEEEecCCCEEEEEECCCeEEEEEcC
Q 046394 150 -----QGPVSALAFHPNGHLMATSGKDCKIKIWDLR 180 (378)
Q Consensus 150 -----~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~ 180 (378)
......++++++|+++++....+.|.++|..
T Consensus 206 ~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 206 EIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp EEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred EEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 0123456777888776666666777777753
No 265
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.78 E-value=0.032 Score=54.66 Aligned_cols=163 Identities=10% Similarity=-0.011 Sum_probs=98.6
Q ss_pred eEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEe-CCCcEEEEeCCCC-----eEEeec-cCCCeeE
Q 046394 18 TWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAG-CKGYPYFYNRDGT-----ELHCSK-EHGEVLK 90 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~-~dg~i~iwd~~~~-----~~~~~~-~~~~~~~ 90 (378)
.+.+.....|+..++....... +......+.+|+|++.+..|+.+. ..+.|+.+++.+. ....+. ....+..
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~~-l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~G 475 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 475 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCEE-EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred ccccccccceeEeeccCCccee-eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcce
Confidence 4445556667777776554333 333346788999998666665554 4677888887653 223333 2223345
Q ss_pred EEE------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCC--Ce--------------eee
Q 046394 91 LQF------LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSG--GT--------------MLC 148 (378)
Q Consensus 91 l~~------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--~~--------------~~~ 148 (378)
|++ ++++-...+.|.+.++........+.........|+++|.+..|+.+... +. +..
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~ 555 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 555 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC
Confidence 555 66666678899999987544433444445678899999986655554322 22 111
Q ss_pred cCCCEEEEEEecCCCEEEEE-ECCCeEEEEEcCC
Q 046394 149 HQGPVSALAFHPNGHLMATS-GKDCKIKIWDLRK 181 (378)
Q Consensus 149 h~~~v~~~~~sp~g~~l~t~-~~d~~i~iwd~~~ 181 (378)
.-.....|++++.+..|..+ ...+.|..+|+..
T Consensus 556 ~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 556 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 22467889999765555544 4556888888854
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.77 E-value=0.026 Score=53.43 Aligned_cols=103 Identities=11% Similarity=-0.056 Sum_probs=66.5
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCCc---------eEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEeeccC
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELGP---------YTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCSKEH 85 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v---------~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~~~~ 85 (378)
+..|.....+.+..+|..+++.+..+....... ..+++ .+..+++++.++.|..+| .+|+.+......
T Consensus 69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~ 146 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKFA 146 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEECS
T ss_pred CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecCC
Confidence 345555553458999999999998887653211 12222 245788888999999999 578888765433
Q ss_pred C-----Ce-eE-EEE--------EEEEEe------CCCeEEEEEcCCCcEEEEEec
Q 046394 86 G-----EV-LK-LQF--------LLASIN------KLGQLRYQNVTMGEIVGNFWT 120 (378)
Q Consensus 86 ~-----~~-~~-l~~--------~l~s~~------~d~~i~iwd~~~~~~~~~~~~ 120 (378)
. .. .. +.. .+++++ .++.|..+|..+|+.+.....
T Consensus 147 ~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~ 202 (582)
T 1flg_A 147 DHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPF 202 (582)
T ss_dssp CGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEES
T ss_pred CCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCC
Confidence 2 11 11 111 233333 378999999999998877653
No 267
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.72 E-value=0.025 Score=55.65 Aligned_cols=185 Identities=10% Similarity=0.023 Sum_probs=112.4
Q ss_pred ceeeEEEeccceeeeeecccceeeEEe---ecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeecc----CCC
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDI---MLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKE----HGE 87 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l---~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~ 87 (378)
....+....++-+..+|..++....-. ......|.++...++|.+ .+|+.++-|..+|........+.. ...
T Consensus 373 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~ 451 (781)
T 3v9f_A 373 QGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNTRLKKFQIIELEKNELLD 451 (781)
T ss_dssp TSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCE-EEEETTEEEEEECSSSCEEEECCSTTTCCCC
T ss_pred CCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCE-EEEeccCCEEEEcCCCCcEEEeccCCCCCCe
Confidence 344554444455677776654322111 223456889998888864 446666679999966555554432 122
Q ss_pred eeEEEE----EEEEEeCCCeEEEEEcCCCcEEEEEecC-----CCCeeEEEEcCCCCEEEEEcCCCe---------eee-
Q 046394 88 VLKLQF----LLASINKLGQLRYQNVTMGEIVGNFWTG-----LGRTDVIRVNPFNGVVSLGHSGGT---------MLC- 148 (378)
Q Consensus 88 ~~~l~~----~l~s~~~d~~i~iwd~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~d~~---------~~~- 148 (378)
+.++.. .+..|+. +-|..||..+++........ ...|.++...++|.+.+.....|. +..
T Consensus 452 v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~ 530 (781)
T 3v9f_A 452 VRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKF 530 (781)
T ss_dssp EEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEE
T ss_pred EEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEc
Confidence 355555 4444555 55889998876644332222 357889999999887665554554 110
Q ss_pred ------cCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee-------cCCceEEEEecCCCc
Q 046394 149 ------HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL-------PGHAKTLDFSRKDSG 203 (378)
Q Consensus 149 ------h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~-------~~~i~~~~~sp~g~~ 203 (378)
....|.++...++|++.++. .+|.|..||..+++. ..+ ...+.++...++|..
T Consensus 531 ~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~l 596 (781)
T 3v9f_A 531 NQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNI 596 (781)
T ss_dssp CTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCE
T ss_pred cCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCE
Confidence 13468899988888765544 466558899877653 222 235778888888765
No 268
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.72 E-value=0.024 Score=50.87 Aligned_cols=165 Identities=11% Similarity=-0.025 Sum_probs=103.4
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEe-CCCcEEEEeCCCC-----eEEeec-cCCCe
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAG-CKGYPYFYNRDGT-----ELHCSK-EHGEV 88 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~-~dg~i~iwd~~~~-----~~~~~~-~~~~~ 88 (378)
.-.+.+.....|+..++........+. ....+..|+|++.+..|+.+. ..+.|+.++.++. ....+. ....+
T Consensus 83 ~~~ll~~~~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 83 IAYLFFTNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp SCEEEEEETTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred cceeEEeccceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 345556667888888887665443333 346788999999776666664 4678888987652 222232 22234
Q ss_pred eEEEE------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCC--Ce-------------e-
Q 046394 89 LKLQF------LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSG--GT-------------M- 146 (378)
Q Consensus 89 ~~l~~------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--~~-------------~- 146 (378)
..+++ ++++-...+.|.+.++........+.........|+++|.+..|+.+... +. +
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 55555 55566667889999987555444444455668899999976655554321 11 1
Q ss_pred eecCCCEEEEEEecCCCEEEEE-ECCCeEEEEEcCC
Q 046394 147 LCHQGPVSALAFHPNGHLMATS-GKDCKIKIWDLRK 181 (378)
Q Consensus 147 ~~h~~~v~~~~~sp~g~~l~t~-~~d~~i~iwd~~~ 181 (378)
...-.....|+++|++..|..+ +..+.|..+|+..
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 1122456889999866665554 4567888888754
No 269
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.70 E-value=0.046 Score=53.71 Aligned_cols=227 Identities=6% Similarity=-0.107 Sum_probs=124.6
Q ss_pred eeeEEEeccceeeeeecccceeeEEe-------ecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeecc----
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDI-------MLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKE---- 84 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l-------~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~---- 84 (378)
...+..... -+..||..++....-. ......|.++...++|. |..|+..+-|.++|........+..
T Consensus 222 g~lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~ 299 (781)
T 3v9f_A 222 GNIWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFE 299 (781)
T ss_dssp CCEEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CE
T ss_pred CCEEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccc
Confidence 334444443 5667776655432111 11235688999988885 5556664568999965544332221
Q ss_pred ------------CCCeeEEEE----EEEEEeCCCeEEEEEcCCCcEEEEEe---------cCCCCeeEEEEcCCCCEEEE
Q 046394 85 ------------HGEVLKLQF----LLASINKLGQLRYQNVTMGEIVGNFW---------TGLGRTDVIRVNPFNGVVSL 139 (378)
Q Consensus 85 ------------~~~~~~l~~----~l~s~~~d~~i~iwd~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~~ 139 (378)
...+.++.. .|-.|+.++-|..++..++....... .....|.++...++|.+.+.
T Consensus 300 ~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWig 379 (781)
T 3v9f_A 300 FIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIG 379 (781)
T ss_dssp EECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEE
T ss_pred cccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEE
Confidence 112355555 55556666778888887654322210 12356889998888876554
Q ss_pred EcCCCe---------ee-------ecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee-----cCCceEEEEe
Q 046394 140 GHSGGT---------ML-------CHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL-----PGHAKTLDFS 198 (378)
Q Consensus 140 ~~~d~~---------~~-------~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~-----~~~i~~~~~s 198 (378)
....|. +. .....|.++...++|++.+ |+.++.|..||..+++..... ...|.++...
T Consensus 380 t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d 458 (781)
T 3v9f_A 380 TDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYED 458 (781)
T ss_dssp EBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEEC
T ss_pred eCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEEC
Confidence 434454 11 1235688888888887544 666677899998776543221 2456777777
Q ss_pred cCCCccc--------cCCCCCceEEEeec----cCCcceeeeEEcCCCCeEEEecCCCe
Q 046394 199 RKDSGDF--------SGSHNYNRYMGYSM----VKGYQIGKVSFRPYEDVLGIGHSMGV 245 (378)
Q Consensus 199 p~g~~~~--------~~~~~~~~~~~~~~----~~~~~v~~~~~sp~g~~l~~~~~~g~ 245 (378)
++|..-+ ++..+......... .....|.++...++|.+.+.+...|+
T Consensus 459 ~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl 517 (781)
T 3v9f_A 459 KNKKIWIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGV 517 (781)
T ss_dssp TTSEEEEEETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCE
T ss_pred CCCCEEEEECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCE
Confidence 6665321 11111111111111 01346888888888877666554554
No 270
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.69 E-value=0.0084 Score=54.48 Aligned_cols=125 Identities=11% Similarity=0.044 Sum_probs=70.0
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCeE--EeeccCCCe
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKG-----YPYFYNRDGTEL--HCSKEHGEV 88 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg-----~i~iwd~~~~~~--~~~~~~~~~ 88 (378)
...|.....+.|+.+|+.++.... +......+.+++|+++|+ |+++...+ .+...+..+... ..+.....+
T Consensus 153 g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P 230 (433)
T 4hw6_A 153 DDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGA 230 (433)
T ss_dssp CEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSB
T ss_pred CEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccccccccCCC
Confidence 334433333678888887766543 333345689999999999 55554322 233344222111 122222233
Q ss_pred eEEEE------EEEEEeCCCeEEEEEcCCCcEEEEE-ecC-CCCeeEEEEcCCCCEEEEEcC
Q 046394 89 LKLQF------LLASINKLGQLRYQNVTMGEIVGNF-WTG-LGRTDVIRVNPFNGVVSLGHS 142 (378)
Q Consensus 89 ~~l~~------~l~s~~~d~~i~iwd~~~~~~~~~~-~~~-~~~v~~~~~s~~~~~l~~~~~ 142 (378)
..+++ ++++-..++.|+.+|..++.....+ ... ......++|+|+++.|+++..
T Consensus 231 ~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 231 KTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp CCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred CEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence 45555 4555556788999998877663332 222 222346999999986655543
No 271
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.66 E-value=0.0056 Score=58.00 Aligned_cols=96 Identities=8% Similarity=0.016 Sum_probs=67.0
Q ss_pred cceeeeeecccceeeEEeecCCCC-------------------------------------c-eEEEEcCCCCEEEEEeC
Q 046394 24 EAIAREVDILSSRNQYDIMLPELG-------------------------------------P-YTLDFTSSGRYMAAAGC 65 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~~~-------------------------------------v-~~~~~sp~g~~l~~~~~ 65 (378)
++.|..+|..+++.+..+...... + ..+++.+....++.+..
T Consensus 181 ~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g 260 (599)
T 1w6s_A 181 RGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTG 260 (599)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCC
Confidence 689999999999998887653211 1 14566677778887766
Q ss_pred CC----------------cEEEEe-CCCCeEEeeccCCC----------e--eEEE-------EEEEEEeCCCeEEEEEc
Q 046394 66 KG----------------YPYFYN-RDGTELHCSKEHGE----------V--LKLQ-------FLLASINKLGQLRYQNV 109 (378)
Q Consensus 66 dg----------------~i~iwd-~~~~~~~~~~~~~~----------~--~~l~-------~~l~s~~~d~~i~iwd~ 109 (378)
++ .|..+| .+|..+..++.... + ..+. -.++.++.+|.++++|.
T Consensus 261 ~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~ 340 (599)
T 1w6s_A 261 NPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDR 340 (599)
T ss_dssp CCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEET
T ss_pred CCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEEC
Confidence 53 788899 56777766654321 1 1111 14667889999999999
Q ss_pred CCCcEEEEEe
Q 046394 110 TMGEIVGNFW 119 (378)
Q Consensus 110 ~~~~~~~~~~ 119 (378)
.+|+.+....
T Consensus 341 ~tG~~lw~~~ 350 (599)
T 1w6s_A 341 TDGALVSANK 350 (599)
T ss_dssp TTCCEEEEEE
T ss_pred CCCCEeeccc
Confidence 9999887765
No 272
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.60 E-value=0.029 Score=48.58 Aligned_cols=163 Identities=13% Similarity=-0.012 Sum_probs=95.1
Q ss_pred eEEEeccceeeeeeccccee--eEEeecCCCCceEEEEcCCCCEEEEE-eCCCcEEEEeCCCCe--EEeec-cCCCeeEE
Q 046394 18 TWRIKQEAIAREVDILSSRN--QYDIMLPELGPYTLDFTSSGRYMAAA-GCKGYPYFYNRDGTE--LHCSK-EHGEVLKL 91 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~~~~--~~~l~~~~~~v~~~~~sp~g~~l~~~-~~dg~i~iwd~~~~~--~~~~~-~~~~~~~l 91 (378)
.+.+.....|+.+++..... ...+.. -..+.+++|++.+..|+.+ ...+.|..++.++.. ...+. +-..+..+
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gl 84 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 84 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEE
T ss_pred EEEEEccCeEEEEECCCCceEEEEEecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEE
Confidence 34455566778888876531 122222 2356799999866566555 446789999976642 12222 22233445
Q ss_pred EE------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcC--CCe-------------e-eec
Q 046394 92 QF------LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHS--GGT-------------M-LCH 149 (378)
Q Consensus 92 ~~------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--d~~-------------~-~~h 149 (378)
++ ++++-...+.|.++++........+.........++++|.+..|+.+.. .+. + ...
T Consensus 85 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~ 164 (318)
T 3sov_A 85 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE 164 (318)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSS
T ss_pred EEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECC
Confidence 54 5556566788999998644333333344566788999987665555442 122 1 111
Q ss_pred CCCEEEEEEecCCCEEE-EEECCCeEEEEEcCC
Q 046394 150 QGPVSALAFHPNGHLMA-TSGKDCKIKIWDLRK 181 (378)
Q Consensus 150 ~~~v~~~~~sp~g~~l~-t~~~d~~i~iwd~~~ 181 (378)
-.....|+|+|++..|. +-+..+.|..+|+..
T Consensus 165 l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 165 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 23457889998655554 444567888888753
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.58 E-value=0.031 Score=48.35 Aligned_cols=120 Identities=12% Similarity=0.016 Sum_probs=70.5
Q ss_pred EEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEe-CCCcEEEEeCCC----CeEEe-eccC-CCeeEE
Q 046394 19 WRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAG-CKGYPYFYNRDG----TELHC-SKEH-GEVLKL 91 (378)
Q Consensus 19 ~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~-~dg~i~iwd~~~----~~~~~-~~~~-~~~~~l 91 (378)
+.+.+...|+..|+.+......+.. ...+.+++|++.+..|+.+. ..+.|..++..+ ..... +... ..+..+
T Consensus 4 ll~~~~~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gl 82 (316)
T 1ijq_A 4 LFFTNRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 82 (316)
T ss_dssp EEEECBSSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEE
T ss_pred EEEECCCeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEE
Confidence 4455566778888887665444433 36788999999776666554 467899999765 22222 3222 234555
Q ss_pred EE------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEE
Q 046394 92 QF------LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSL 139 (378)
Q Consensus 92 ~~------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 139 (378)
++ ++++-...+.|.++|+........+.........++++|.+..|+.
T Consensus 83 avd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~ 136 (316)
T 1ijq_A 83 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYW 136 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEE
T ss_pred EEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEE
Confidence 54 4555566788888888644333333333355667777765554433
No 274
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.56 E-value=0.033 Score=48.13 Aligned_cols=150 Identities=9% Similarity=0.030 Sum_probs=81.9
Q ss_pred eEEEeccceeeeeecccceee-EEeec------------------CCCCceEEEEcC-CCCEEEEEeCCCcEEEEeCCCC
Q 046394 18 TWRIKQEAIAREVDILSSRNQ-YDIML------------------PELGPYTLDFTS-SGRYMAAAGCKGYPYFYNRDGT 77 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~~~~~-~~l~~------------------~~~~v~~~~~sp-~g~~l~~~~~dg~i~iwd~~~~ 77 (378)
.|.-..++.|..||..++... +.... ....+.++++++ +|+ |+++...+.|.++|..+.
T Consensus 33 l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g 111 (322)
T 2fp8_A 33 FYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGG 111 (322)
T ss_dssp EEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEETTTEEEEECTTCE
T ss_pred EEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEECCCCEEEEeCCCC
Confidence 454445677888887665332 21110 013578999998 564 555555555888997654
Q ss_pred eEEeeccC------CCeeEEEE------EEEEEeC-----------------CCeEEEEEcCCCcEEEEEecCCCCeeEE
Q 046394 78 ELHCSKEH------GEVLKLQF------LLASINK-----------------LGQLRYQNVTMGEIVGNFWTGLGRTDVI 128 (378)
Q Consensus 78 ~~~~~~~~------~~~~~l~~------~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~v~~~ 128 (378)
.+..+... ..+..+++ ++++... ++.|..||..+++..... ......+.+
T Consensus 112 ~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gi 190 (322)
T 2fp8_A 112 HATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL-KELHVPGGA 190 (322)
T ss_dssp ECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE-EEESCCCEE
T ss_pred EEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEec-cCCccCcce
Confidence 44333211 11244544 2333211 356777777666543222 122456789
Q ss_pred EEcCCCCEEEEEc-CCCe---e-------------eecCCCEEEEEEecCCCEEEEEEC
Q 046394 129 RVNPFNGVVSLGH-SGGT---M-------------LCHQGPVSALAFHPNGHLMATSGK 170 (378)
Q Consensus 129 ~~s~~~~~l~~~~-~d~~---~-------------~~h~~~v~~~~~sp~g~~l~t~~~ 170 (378)
+++|++..|+++. ..+. + ....+ ...+++.++|+++++...
T Consensus 191 a~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 191 EVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEE
T ss_pred EECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecC
Confidence 9999998666553 3333 0 11112 566788888876666543
No 275
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.54 E-value=0.0025 Score=60.39 Aligned_cols=59 Identities=17% Similarity=0.180 Sum_probs=40.9
Q ss_pred ceeeeeecccceeeEEeec--CCC-------CceEEEEc-CCCC---EEEEEeCCCcEEEEe-CCCCeEEeec
Q 046394 25 AIAREVDILSSRNQYDIML--PEL-------GPYTLDFT-SSGR---YMAAAGCKGYPYFYN-RDGTELHCSK 83 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~--~~~-------~v~~~~~s-p~g~---~l~~~~~dg~i~iwd-~~~~~~~~~~ 83 (378)
+.|..+|..+++.+..+.. |.. .+.-+... .+|+ .++.++.+|.++++| .+|+.+..+.
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 363 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccc
Confidence 5788999999999988764 321 11122222 4674 788899999999999 6777765543
No 276
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.49 E-value=0.022 Score=49.46 Aligned_cols=161 Identities=14% Similarity=0.178 Sum_probs=104.8
Q ss_pred cceeeeeecccceeeEEeecCCCCceEEEEcCC----CC---EEEEEeC---CCcEEEEeC--CCCeEEeeccC------
Q 046394 24 EAIAREVDILSSRNQYDIMLPELGPYTLDFTSS----GR---YMAAAGC---KGYPYFYNR--DGTELHCSKEH------ 85 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~----g~---~l~~~~~---dg~i~iwd~--~~~~~~~~~~~------ 85 (378)
.+-+.+||+ +++.+..+.. +.++.+..-|+ |. ++++... +++|.+|++ ....+..+...
T Consensus 49 ~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t 125 (355)
T 3amr_A 49 KSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIAT 125 (355)
T ss_dssp TTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEEC
T ss_pred CCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCC
Confidence 467999999 8888888764 46777766663 22 2333333 478999963 44456555221
Q ss_pred --CCeeEEEE---------EEEEEeCCCeEEEEEcC-------CCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--
Q 046394 86 --GEVLKLQF---------LLASINKLGQLRYQNVT-------MGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT-- 145 (378)
Q Consensus 86 --~~~~~l~~---------~l~s~~~d~~i~iwd~~-------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-- 145 (378)
..+..+++ +++....+|.+..|++. +.+.+++|... +.+..+...+....|+++-.+..
T Consensus 126 ~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~Lyv~eEd~GIw 204 (355)
T 3amr_A 126 AINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGRLYIAEEDEAIW 204 (355)
T ss_dssp CCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTEEEEEETTTEEE
T ss_pred CCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCeEEEecccceEE
Confidence 23344444 57777788999999883 33567777654 57888899998888888777644
Q ss_pred -ee-----------------ec-CCCEEEEEEe--cCCC-EEEEEE-CCCeEEEEEcC-Cceeeeee
Q 046394 146 -ML-----------------CH-QGPVSALAFH--PNGH-LMATSG-KDCKIKIWDLR-KYEVLQTL 188 (378)
Q Consensus 146 -~~-----------------~h-~~~v~~~~~s--p~g~-~l~t~~-~d~~i~iwd~~-~~~~~~~~ 188 (378)
+. ++ ...+..|++- ++++ ||++++ .++++.+||.. +.+.+..|
T Consensus 205 ~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 205 KFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred EEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 11 11 1357788884 4555 555555 67799999996 56665555
No 277
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.27 E-value=0.14 Score=48.84 Aligned_cols=167 Identities=13% Similarity=0.088 Sum_probs=105.6
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecC-CCCceEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEeecc-C-CCeeEE
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLP-ELGPYTLDFTSSGRYMAAAG-CKGYPYFYNRDGTELHCSKE-H-GEVLKL 91 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~-~~~v~~~~~sp~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~-~-~~~~~l 91 (378)
+.++.+.+...|+..++.+......+... -..+.+|+|++.+..|+.+. .++.|..++.+|..+..+.. . ..+..+
T Consensus 6 ~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 6 EAFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM 85 (628)
T ss_dssp CCEEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred CcEEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence 33455667778888888766543333322 24688999999777666554 47889999987754443322 2 234445
Q ss_pred EE------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcC-----------CCe----eeecC
Q 046394 92 QF------LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHS-----------GGT----MLCHQ 150 (378)
Q Consensus 92 ~~------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----------d~~----~~~h~ 150 (378)
++ ++++-...+.|.+.++........+.........|+++|....|+.+.. ||. +...-
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~ 165 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNV 165 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSC
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCC
Confidence 54 5566666788999998654332223344567889999996655554432 221 22234
Q ss_pred CCEEEEEEecCCCEEEEE-ECCCeEEEEEcCCc
Q 046394 151 GPVSALAFHPNGHLMATS-GKDCKIKIWDLRKY 182 (378)
Q Consensus 151 ~~v~~~~~sp~g~~l~t~-~~d~~i~iwd~~~~ 182 (378)
.....|++++++..|..+ ...+.|..+|+...
T Consensus 166 ~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 166 GRANGLTIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCcceEEEccccCEEEEEECCCCEEEEEcCCCC
Confidence 567899999976665544 45678999998653
No 278
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.24 E-value=0.032 Score=48.09 Aligned_cols=143 Identities=14% Similarity=0.123 Sum_probs=91.7
Q ss_pred EEeecCCCCceEEEEcCCCCEEEEEe-CCCcEEEEeCCCCe-EE-eeccCC-----C--eeEEEE--------EEEEEe-
Q 046394 39 YDIMLPELGPYTLDFTSSGRYMAAAG-CKGYPYFYNRDGTE-LH-CSKEHG-----E--VLKLQF--------LLASIN- 99 (378)
Q Consensus 39 ~~l~~~~~~v~~~~~sp~g~~l~~~~-~dg~i~iwd~~~~~-~~-~~~~~~-----~--~~~l~~--------~l~s~~- 99 (378)
..+.....-+-+++|++....|..++ ..|.|..||..+.. .. .+.+-. . +..+.| ++++..
T Consensus 6 i~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~ 85 (334)
T 2p9w_A 6 IDVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKN 85 (334)
T ss_dssp EEECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEE
T ss_pred EEecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcc
Confidence 34445445566999988666666665 68999999976432 22 222211 1 244555 344332
Q ss_pred ------------CCCeEEEEEcC---CCcEEEEEec-------------CCCCeeEEEEcCCCCEEEEEcCC-Ce-----
Q 046394 100 ------------KLGQLRYQNVT---MGEIVGNFWT-------------GLGRTDVIRVNPFNGVVSLGHSG-GT----- 145 (378)
Q Consensus 100 ------------~d~~i~iwd~~---~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~~~~~d-~~----- 145 (378)
.+..|..+|+. +++.+..... ....++.++..++|+..++++.. +.
T Consensus 86 ~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~ 165 (334)
T 2p9w_A 86 AKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVS 165 (334)
T ss_dssp TTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEEC
T ss_pred cccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEe
Confidence 26779999998 7877655542 11347889999999988877665 44
Q ss_pred --------eeec------CCCEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q 046394 146 --------MLCH------QGPVSALAFHPNGHLMATSGKDCKIKIWDLRK 181 (378)
Q Consensus 146 --------~~~h------~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~ 181 (378)
+... ....+.|+++|+|+.|++....+.|..+|+.+
T Consensus 166 pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 166 ADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp TTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 1001 11245788999998888777788888888763
No 279
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.20 E-value=0.094 Score=45.58 Aligned_cols=160 Identities=12% Similarity=0.111 Sum_probs=96.5
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEeeccCCCeeEEEE-------------EEEEEeC--CCeEEEEEcC--CCcEEEEE
Q 046394 56 SGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEVLKLQF-------------LLASINK--LGQLRYQNVT--MGEIVGNF 118 (378)
Q Consensus 56 ~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~l~~-------------~l~s~~~--d~~i~iwd~~--~~~~~~~~ 118 (378)
...+++.....+-+.+||++|+.+..+.. ...+.+.. .+++.-. +++|.+|++. ++. +..+
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i 116 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSM 116 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEEC
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeec
Confidence 34566666677889999999999998865 22333333 2344444 6899999773 333 4444
Q ss_pred ec-------CCCCeeEEEE--cCC-CC-EEEEEcCCCe--------------------eeecCCCEEEEEEecCCCEEEE
Q 046394 119 WT-------GLGRTDVIRV--NPF-NG-VVSLGHSGGT--------------------MLCHQGPVSALAFHPNGHLMAT 167 (378)
Q Consensus 119 ~~-------~~~~v~~~~~--s~~-~~-~l~~~~~d~~--------------------~~~h~~~v~~~~~sp~g~~l~t 167 (378)
.. ....+..+|+ +|. +. ++++...+|. .....+.+..|...+....|..
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv 196 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYI 196 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEE
Confidence 21 1145666777 775 43 5666666666 1122456778888888888999
Q ss_pred EECCCeEEEEEcC-----Cceeeeee-----cCCceEEEE--ecCCC-ccccCCCCCceEEEe
Q 046394 168 SGKDCKIKIWDLR-----KYEVLQTL-----PGHAKTLDF--SRKDS-GDFSGSHNYNRYMGY 217 (378)
Q Consensus 168 ~~~d~~i~iwd~~-----~~~~~~~~-----~~~i~~~~~--sp~g~-~~~~~~~~~~~~~~~ 217 (378)
+-.+..|..+|.. +++.+..+ ...+..|++ .++|. +.+........+..+
T Consensus 197 ~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vy 259 (355)
T 3amr_A 197 AEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIY 259 (355)
T ss_dssp EETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEE
T ss_pred ecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEE
Confidence 9988777777754 34455444 235566666 44554 333333333334444
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.14 E-value=0.11 Score=44.99 Aligned_cols=142 Identities=11% Similarity=-0.047 Sum_probs=87.2
Q ss_pred CCceEEEEcCCCCEEEE-EeCCCcEEEEeCCCCeEEeec--cCCCeeEEEE-----E-EEEE-eCCCeEEEEEcCCCcEE
Q 046394 46 LGPYTLDFTSSGRYMAA-AGCKGYPYFYNRDGTELHCSK--EHGEVLKLQF-----L-LASI-NKLGQLRYQNVTMGEIV 115 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~-~~~dg~i~iwd~~~~~~~~~~--~~~~~~~l~~-----~-l~s~-~~d~~i~iwd~~~~~~~ 115 (378)
..+.++++.+.+..|+. -...+.|.+++.+|.....+. ....+..+++ . +.+- +..+.|...++......
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~ 158 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 158 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE
Confidence 35668899875555544 445678999998876555443 2233577776 3 3333 23578888887533222
Q ss_pred EEEecCCCCeeEEEEcCCCCEEEEEcCCCe---------------eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcC
Q 046394 116 GNFWTGLGRTDVIRVNPFNGVVSLGHSGGT---------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLR 180 (378)
Q Consensus 116 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~---------------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~ 180 (378)
..+...-...+.|+++|++..|+.+..... ..+.......+++.. +.++.+-...+.|..+|..
T Consensus 159 ~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 159 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKY 237 (318)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECC
Confidence 222233456789999998776665543222 111234456677753 3455666667889999988
Q ss_pred Cceeeeee
Q 046394 181 KYEVLQTL 188 (378)
Q Consensus 181 ~~~~~~~~ 188 (378)
+++....+
T Consensus 238 ~G~~~~~i 245 (318)
T 3sov_A 238 TGEGLREI 245 (318)
T ss_dssp TCCSCEEE
T ss_pred CCCceEEE
Confidence 88776666
No 281
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.11 E-value=0.024 Score=55.42 Aligned_cols=65 Identities=8% Similarity=-0.027 Sum_probs=37.8
Q ss_pred CceEEEEc-CCCCEEEEEeC-CC----cEEEEeCCCC-eEEeeccC-CCe-eEEEE-----EEEEEeCC-----CeEEEE
Q 046394 47 GPYTLDFT-SSGRYMAAAGC-KG----YPYFYNRDGT-ELHCSKEH-GEV-LKLQF-----LLASINKL-----GQLRYQ 107 (378)
Q Consensus 47 ~v~~~~~s-p~g~~l~~~~~-dg----~i~iwd~~~~-~~~~~~~~-~~~-~~l~~-----~l~s~~~d-----~~i~iw 107 (378)
.+...+|| |||++||.+.. +| .|+++|+.+. .. +... ... ..+.| .|+....| ..|.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 56789999 99998886543 33 4999996554 31 1111 112 45566 33333332 357777
Q ss_pred EcCCCc
Q 046394 108 NVTMGE 113 (378)
Q Consensus 108 d~~~~~ 113 (378)
++.+++
T Consensus 253 ~lgt~~ 258 (751)
T 2xe4_A 253 VMGKLQ 258 (751)
T ss_dssp ETTSCG
T ss_pred ECCCCc
Confidence 776654
No 282
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.11 E-value=0.18 Score=48.06 Aligned_cols=160 Identities=14% Similarity=0.029 Sum_probs=93.3
Q ss_pred eccceeeeeecccce-eeEEeecCCCCceEEEEcCCCCEEEEEeC-CCcEEEEeCCCCe--EEeeccC-CCeeEEEE---
Q 046394 22 KQEAIAREVDILSSR-NQYDIMLPELGPYTLDFTSSGRYMAAAGC-KGYPYFYNRDGTE--LHCSKEH-GEVLKLQF--- 93 (378)
Q Consensus 22 ~~~~~i~~~d~~~~~-~~~~l~~~~~~v~~~~~sp~g~~l~~~~~-dg~i~iwd~~~~~--~~~~~~~-~~~~~l~~--- 93 (378)
.....|+..|+.... ....+...-..+.+++|++.+..|+.+.. .+.|..++.+|.. ...+... ..+..+++
T Consensus 15 ~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~ 94 (619)
T 3s94_A 15 ANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 94 (619)
T ss_dssp ECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETT
T ss_pred eccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEec
Confidence 445566777776543 22222223356889999997777776654 5778888877652 2233322 34556666
Q ss_pred ---EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCC--Ce--------------eeecCCCEE
Q 046394 94 ---LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSG--GT--------------MLCHQGPVS 154 (378)
Q Consensus 94 ---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--~~--------------~~~h~~~v~ 154 (378)
++++-...+.|.+.++........+.........|+++|.+..|+.+... +. ....-....
T Consensus 95 ~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~ 174 (619)
T 3s94_A 95 GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPN 174 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEE
T ss_pred CCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCc
Confidence 55666677899999986543333333445667889999976655444321 22 111234568
Q ss_pred EEEEecCCCEEEEE-ECCCeEEEEEcCC
Q 046394 155 ALAFHPNGHLMATS-GKDCKIKIWDLRK 181 (378)
Q Consensus 155 ~~~~sp~g~~l~t~-~~d~~i~iwd~~~ 181 (378)
.|++++++..|..+ +..+.|..+|+..
T Consensus 175 Glald~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 175 GLTLDYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred EEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence 89999965555444 4566888888864
No 283
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.09 E-value=0.0044 Score=60.04 Aligned_cols=161 Identities=12% Similarity=0.010 Sum_probs=92.0
Q ss_pred EEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEe-CCCcEEEEeCCC----CeEE-eecc-CCCeeEEE
Q 046394 20 RIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAG-CKGYPYFYNRDG----TELH-CSKE-HGEVLKLQ 92 (378)
Q Consensus 20 ~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~-~dg~i~iwd~~~----~~~~-~~~~-~~~~~~l~ 92 (378)
.+.....|+..++.+......+.. ...+.+|+|++.+..|+.+. ..+.|+.+++.+ .... .+.. ...+..++
T Consensus 381 l~~~~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~gla 459 (699)
T 1n7d_A 381 FFTNRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 459 (699)
T ss_dssp CCCCTTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEE
T ss_pred EecCccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEE
Confidence 344455667777766544333332 24677899999777776664 357899999765 2222 2211 11234444
Q ss_pred E------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCC--Ce-------------e-eecC
Q 046394 93 F------LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSG--GT-------------M-LCHQ 150 (378)
Q Consensus 93 ~------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--~~-------------~-~~h~ 150 (378)
+ ++++-...+.|.++++........+.........|+++|.+..|+.+... +. + ...-
T Consensus 460 vD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l 539 (699)
T 1n7d_A 460 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 539 (699)
T ss_dssp CCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSC
T ss_pred EEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCC
Confidence 4 44554567889999986544433333334567788999876655544321 22 1 0111
Q ss_pred CCEEEEEEecCC-CEEEEEECCCeEEEEEcCC
Q 046394 151 GPVSALAFHPNG-HLMATSGKDCKIKIWDLRK 181 (378)
Q Consensus 151 ~~v~~~~~sp~g-~~l~t~~~d~~i~iwd~~~ 181 (378)
.....|+|+|++ +++++-+..+.|..+|+..
T Consensus 540 ~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 540 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred CCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 234578999864 4455555667888888753
No 284
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.08 E-value=0.036 Score=50.30 Aligned_cols=101 Identities=16% Similarity=0.175 Sum_probs=64.5
Q ss_pred CeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCC---e----e-----------eecCCCEEEEEEec-CC
Q 046394 102 GQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGG---T----M-----------LCHQGPVSALAFHP-NG 162 (378)
Q Consensus 102 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~---~----~-----------~~h~~~v~~~~~sp-~g 162 (378)
+.|+.+|+.++.... +......+..++++++|.++++..... . + ...-.....++++| +|
T Consensus 162 ~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G 240 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNG 240 (433)
T ss_dssp SCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTC
T ss_pred CCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCCC
Confidence 667777776665543 333445688999999999444433211 1 0 01122345688999 78
Q ss_pred CEEEEEECCCeEEEEEcCCceeeeee-----cCCceEEEEecCCCc
Q 046394 163 HLMATSGKDCKIKIWDLRKYEVLQTL-----PGHAKTLDFSRKDSG 203 (378)
Q Consensus 163 ~~l~t~~~d~~i~iwd~~~~~~~~~~-----~~~i~~~~~sp~g~~ 203 (378)
.++++-..++.|+.+|..++.....+ ......++|+|+|.+
T Consensus 241 ~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~ 286 (433)
T 4hw6_A 241 KIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDW 286 (433)
T ss_dssp CEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSE
T ss_pred eEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCE
Confidence 77777777889999999877663333 123356999999983
No 285
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.06 E-value=0.13 Score=44.60 Aligned_cols=195 Identities=11% Similarity=0.062 Sum_probs=104.0
Q ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEeCCCC-eEEee--cc--CCC-eeEEEE---EEEEEeCCCeEEEEEcCCCcEEE
Q 046394 46 LGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGT-ELHCS--KE--HGE-VLKLQF---LLASINKLGQLRYQNVTMGEIVG 116 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~-~~~~~--~~--~~~-~~~l~~---~l~s~~~d~~i~iwd~~~~~~~~ 116 (378)
..+.+|.|.+++..+++ +..|.|... .++. .-..+ .. ... ..++.| .++.++.++.|.. ....|+.-.
T Consensus 36 ~~~~~v~~~~~~~~~~~-G~~g~i~~s-~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~tW~ 112 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLV-GVNATLMET-RDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQSWS 112 (327)
T ss_dssp SCEEEEEESSSSCEEEE-ETTTEEEEE-SSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEEEE-ESSTTSSCE
T ss_pred CcEEEEEECCCCcEEEE-cCCCeEEEe-CCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeEEE-ECCCCCCce
Confidence 46889999887777775 456765433 3332 11111 11 122 266766 3333455565433 223344333
Q ss_pred EEec---CCCCeeEEEEcCCCCEEEEEcCCCe-------------eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEc-
Q 046394 117 NFWT---GLGRTDVIRVNPFNGVVSLGHSGGT-------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDL- 179 (378)
Q Consensus 117 ~~~~---~~~~v~~~~~s~~~~~l~~~~~d~~-------------~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~- 179 (378)
.+.. ..+.+..+.+.+++..++++...+. ...+...+..+++.|++.+++.+...+..+-+|-
T Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g 192 (327)
T 2xbg_A 113 QIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG 192 (327)
T ss_dssp ECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT
T ss_pred ECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC
Confidence 3221 2345677877777776666543222 2234557889999999888776654444444442
Q ss_pred -CCceeeeee-cCCceEEEEecCCCccccCCC--------C-CceEEEeecc---CCcceeeeEEcCCCCeEEEecCC
Q 046394 180 -RKYEVLQTL-PGHAKTLDFSRKDSGDFSGSH--------N-YNRYMGYSMV---KGYQIGKVSFRPYEDVLGIGHSM 243 (378)
Q Consensus 180 -~~~~~~~~~-~~~i~~~~~sp~g~~~~~~~~--------~-~~~~~~~~~~---~~~~v~~~~~sp~g~~l~~~~~~ 243 (378)
.+.+.+... ...+..+.+++++...+.... + +........+ ....+.++.|.|++.+++++...
T Consensus 193 G~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g 270 (327)
T 2xbg_A 193 QTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG 270 (327)
T ss_dssp CSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT
T ss_pred CCceeECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC
Confidence 233333222 456778888888764322211 0 1111111110 12347889999988888877643
No 286
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.00 E-value=0.039 Score=53.05 Aligned_cols=90 Identities=4% Similarity=-0.055 Sum_probs=54.9
Q ss_pred eeeeeecccceee--EEeec-CCCCceEEEEcCCCCEEEEEeC-CCcEEEEeCCCCeEEeecc-C--CCeeEEEE-----
Q 046394 26 IAREVDILSSRNQ--YDIML-PELGPYTLDFTSSGRYMAAAGC-KGYPYFYNRDGTELHCSKE-H--GEVLKLQF----- 93 (378)
Q Consensus 26 ~i~~~d~~~~~~~--~~l~~-~~~~v~~~~~sp~g~~l~~~~~-dg~i~iwd~~~~~~~~~~~-~--~~~~~l~~----- 93 (378)
.+.+||+.+++.. ..+.. +.....++++.++|..+++|+. +..+.+||.....-..+.. + ....++.+
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~ 299 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR 299 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCe
Confidence 5788998887632 22322 3233456788899999999985 5589999954433333221 1 11123333
Q ss_pred EEEEEe-CC-----CeEEEEEcCCCcEE
Q 046394 94 LLASIN-KL-----GQLRYQNVTMGEIV 115 (378)
Q Consensus 94 ~l~s~~-~d-----~~i~iwd~~~~~~~ 115 (378)
+++.|+ .+ ..+.+||..+.+..
T Consensus 300 iyv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 300 VFTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp EEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred EEEEeCcccCCcccccceEeCCCCCcce
Confidence 666676 34 56899999876643
No 287
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.97 E-value=0.22 Score=45.67 Aligned_cols=119 Identities=13% Similarity=0.066 Sum_probs=73.4
Q ss_pred cceeeeeecccceeeEEeecCC---CCceEEEE-------cCCCCEEEEEeCCC-------cEEEEeCCC--CeE-----
Q 046394 24 EAIAREVDILSSRNQYDIMLPE---LGPYTLDF-------TSSGRYMAAAGCKG-------YPYFYNRDG--TEL----- 79 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~---~~v~~~~~-------sp~g~~l~~~~~dg-------~i~iwd~~~--~~~----- 79 (378)
...|+++|+.++.....+.... ..+..|+| +++|.+|+++...+ .|.+++... ...
T Consensus 161 ~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~ 240 (496)
T 3kya_A 161 HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDI 240 (496)
T ss_dssp EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCE
T ss_pred CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccc
Confidence 4678888888776654443321 24789999 99999777776654 266775322 221
Q ss_pred EeeccCCCeeEEEE------EEEEEeCCCeEEEEEcC-------CCcE-----------EEE-Eec-CCCCeeEEEEcCC
Q 046394 80 HCSKEHGEVLKLQF------LLASINKLGQLRYQNVT-------MGEI-----------VGN-FWT-GLGRTDVIRVNPF 133 (378)
Q Consensus 80 ~~~~~~~~~~~l~~------~l~s~~~d~~i~iwd~~-------~~~~-----------~~~-~~~-~~~~v~~~~~s~~ 133 (378)
..+.....+..+++ ++++-..++.|..+|+. ++.. ... +.. .......|+|+|+
T Consensus 241 ~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~ 320 (496)
T 3kya_A 241 QLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPT 320 (496)
T ss_dssp EEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTT
T ss_pred eeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCC
Confidence 22222223355555 66677778889999987 5543 112 222 2244678999999
Q ss_pred CCEEEEEcC
Q 046394 134 NGVVSLGHS 142 (378)
Q Consensus 134 ~~~l~~~~~ 142 (378)
|..|+++..
T Consensus 321 G~~lYvaD~ 329 (496)
T 3kya_A 321 GKYAYFGVI 329 (496)
T ss_dssp SSEEEEEET
T ss_pred CCEEEEEeC
Confidence 996655543
No 288
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.89 E-value=0.033 Score=50.53 Aligned_cols=132 Identities=11% Similarity=0.045 Sum_probs=78.9
Q ss_pred CceEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEeeccCC-CeeEEEE-----EEEEEeC-CC----eEEEEEcCCCcE
Q 046394 47 GPYTLDFTS-SGRYMAAAGCKGYPYFYNRDGTELHCSKEHG-EVLKLQF-----LLASINK-LG----QLRYQNVTMGEI 114 (378)
Q Consensus 47 ~v~~~~~sp-~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~l~~-----~l~s~~~-d~----~i~iwd~~~~~~ 114 (378)
.+..|+++| ++..|+++...+.|+.+|..+..+..+.... .+..++| .|+.+.. ++ .+.+++. .+..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCce
Confidence 567999998 4556666655578999998776665554333 3588888 3444433 22 3444443 3322
Q ss_pred E--EEEecCCCCeeEEEEcC-CCCEEEEEcCCCe----------e---ee--cCCCEEEEEEecCCCEE-EEEECCCeEE
Q 046394 115 V--GNFWTGLGRTDVIRVNP-FNGVVSLGHSGGT----------M---LC--HQGPVSALAFHPNGHLM-ATSGKDCKIK 175 (378)
Q Consensus 115 ~--~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~----------~---~~--h~~~v~~~~~sp~g~~l-~t~~~d~~i~ 175 (378)
. ..+. .......++++| ++.++++-..++. . .. .......++|+|+|++| ++-...+.|.
T Consensus 217 ~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 217 KVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp CSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 1 2222 134567888999 5665555444443 1 01 11235679999999954 4555677888
Q ss_pred EEEcC
Q 046394 176 IWDLR 180 (378)
Q Consensus 176 iwd~~ 180 (378)
.++..
T Consensus 296 ~~~~d 300 (430)
T 3tc9_A 296 RSDYD 300 (430)
T ss_dssp EEEEE
T ss_pred EEeCC
Confidence 88765
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.84 E-value=0.41 Score=46.86 Aligned_cols=142 Identities=9% Similarity=-0.054 Sum_probs=87.5
Q ss_pred CCceEEEEcCCCCEEEEE-eCCCcEEEEeCCCCeEEeeccC--CCeeEEEE------EEEEEe-CCCeEEEEEcCCCcEE
Q 046394 46 LGPYTLDFTSSGRYMAAA-GCKGYPYFYNRDGTELHCSKEH--GEVLKLQF------LLASIN-KLGQLRYQNVTMGEIV 115 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~-~~dg~i~iwd~~~~~~~~~~~~--~~~~~l~~------~l~s~~-~d~~i~iwd~~~~~~~ 115 (378)
..+..|++.+.+..|+.+ ...+.|.+.+++|.....+... ..+..|++ ++++-. ..+.|...++......
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 550 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE
Confidence 467789999877666655 4477899999888776665432 23577777 333332 2378888888644433
Q ss_pred EEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------e-ee--cCCCEEEEEEecCCCEEEEEECCCeEEEEE
Q 046394 116 GNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------M-LC--HQGPVSALAFHPNGHLMATSGKDCKIKIWD 178 (378)
Q Consensus 116 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~-~~--h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd 178 (378)
..+.......+.|++++.+..|+.+..... + .. .-....+|++.. ++++++-...+.|...|
T Consensus 551 ~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 551 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSAN 629 (791)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEe
Confidence 333334467889999988776666543222 1 11 112334555532 34445555667888888
Q ss_pred cCCceeeeee
Q 046394 179 LRKYEVLQTL 188 (378)
Q Consensus 179 ~~~~~~~~~~ 188 (378)
..+|..+..+
T Consensus 630 k~tG~~~~~l 639 (791)
T 3m0c_C 630 RLTGSDVNLL 639 (791)
T ss_dssp TTTCCCCEEE
T ss_pred CCCCcceEEe
Confidence 7777666555
No 290
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.80 E-value=0.18 Score=44.90 Aligned_cols=126 Identities=10% Similarity=0.104 Sum_probs=83.4
Q ss_pred eEEEeccceeeeeecccceeeEEeecC---CC-CceEEEEcCCCCEEEEEeCCCcEEEEeCC-CC------------eEE
Q 046394 18 TWRIKQEAIAREVDILSSRNQYDIMLP---EL-GPYTLDFTSSGRYMAAAGCKGYPYFYNRD-GT------------ELH 80 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~~~~~~~l~~~---~~-~v~~~~~sp~g~~l~~~~~dg~i~iwd~~-~~------------~~~ 80 (378)
-+.+.+++.||.-++........+... .. .|..+..||+|++||..+.. .|.|-.+. +. ...
T Consensus 34 ~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ 112 (452)
T 3pbp_A 34 RIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIF 112 (452)
T ss_dssp EEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEE
T ss_pred EEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCccccccccccee
Confidence 344556688888777755555555554 23 68899999999999998654 78888743 21 112
Q ss_pred eecc-------CCCeeEEEE--------EEEEEeCCCeEEEEEcCCC--cEEEEEe---------cCCCCeeEEEEcCCC
Q 046394 81 CSKE-------HGEVLKLQF--------LLASINKLGQLRYQNVTMG--EIVGNFW---------TGLGRTDVIRVNPFN 134 (378)
Q Consensus 81 ~~~~-------~~~~~~l~~--------~l~s~~~d~~i~iwd~~~~--~~~~~~~---------~~~~~v~~~~~s~~~ 134 (378)
.+.- ...+..+.| .|++-..|+.|++||+... .+. .+. .....|.+++|.+++
T Consensus 113 ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~ 191 (452)
T 3pbp_A 113 HYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDG 191 (452)
T ss_dssp EEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTS
T ss_pred EEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCC
Confidence 2221 123477788 7888889999999999852 222 232 122568899999988
Q ss_pred CEEEEEc--CCCe
Q 046394 135 GVVSLGH--SGGT 145 (378)
Q Consensus 135 ~~l~~~~--~d~~ 145 (378)
-.|++.+ ..|.
T Consensus 192 lTLYvl~~t~~GD 204 (452)
T 3pbp_A 192 LTLYCLNTTEGGD 204 (452)
T ss_dssp SCEEEEECTTSCE
T ss_pred cEEEEEecCCCCC
Confidence 7666644 6565
No 291
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.80 E-value=0.065 Score=47.73 Aligned_cols=58 Identities=14% Similarity=0.205 Sum_probs=43.1
Q ss_pred CeeEEEEcCCCCEEEEEcCCCe-------------------------ee------ecCCCEEEEEEec---CCCEEEEEE
Q 046394 124 RTDVIRVNPFNGVVSLGHSGGT-------------------------ML------CHQGPVSALAFHP---NGHLMATSG 169 (378)
Q Consensus 124 ~v~~~~~s~~~~~l~~~~~d~~-------------------------~~------~h~~~v~~~~~sp---~g~~l~t~~ 169 (378)
.+..+..||+|.+||..+..+. +. ....+|..+.||| .|..|++-.
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLt 146 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLK 146 (452)
T ss_dssp TTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEe
Confidence 4566777777777776655544 00 0246799999999 466899999
Q ss_pred CCCeEEEEEcCC
Q 046394 170 KDCKIKIWDLRK 181 (378)
Q Consensus 170 ~d~~i~iwd~~~ 181 (378)
.|+.|++||+..
T Consensus 147 sD~~Ir~yDl~~ 158 (452)
T 3pbp_A 147 EDDTITMFDILN 158 (452)
T ss_dssp TTSCEEEEETTC
T ss_pred cCCEEEEEEccc
Confidence 999999999976
No 292
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.79 E-value=0.17 Score=43.91 Aligned_cols=134 Identities=15% Similarity=0.093 Sum_probs=77.3
Q ss_pred CCCCceEEEEcCCCCEEEEEeCCCcEEE-EeCCCCeEEeec--cCCCeeEEEE----EEEEEeCCCeEEEEEcCCCcEEE
Q 046394 44 PELGPYTLDFTSSGRYMAAAGCKGYPYF-YNRDGTELHCSK--EHGEVLKLQF----LLASINKLGQLRYQNVTMGEIVG 116 (378)
Q Consensus 44 ~~~~v~~~~~sp~g~~l~~~~~dg~i~i-wd~~~~~~~~~~--~~~~~~~l~~----~l~s~~~d~~i~iwd~~~~~~~~ 116 (378)
+...+.+++++|++.+++++. .|.++. +|..+..-..+. .......+.+ .++.++.+|.+.+.+...++...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~ 239 (327)
T 2xbg_A 161 AIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWG 239 (327)
T ss_dssp CCCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEEC
T ss_pred CCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeE
Confidence 345788999999988877664 455544 343233222221 1223366666 44455567877776433244333
Q ss_pred EEecC----CCCeeEEEEcCCCCEEEEEcCCCe------------ee---ecCCCEEEEEEecCCCEEEEEECCCeEEEE
Q 046394 117 NFWTG----LGRTDVIRVNPFNGVVSLGHSGGT------------ML---CHQGPVSALAFHPNGHLMATSGKDCKIKIW 177 (378)
Q Consensus 117 ~~~~~----~~~v~~~~~s~~~~~l~~~~~d~~------------~~---~h~~~v~~~~~sp~g~~l~t~~~d~~i~iw 177 (378)
.+... ...+.++.+.+++.+++++..... +. .+...+.++.|.+++ .++.++.+|.|.-+
T Consensus 240 ~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~ 318 (327)
T 2xbg_A 240 ELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRY 318 (327)
T ss_dssp CCBCTTSSCCSCEEEEEESSSSCEEEEESTTCEEEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEE
T ss_pred eccCCcccCCcceEEEEecCCCEEEEEeCCCeEEEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEE
Confidence 33211 234788899988887777654333 11 123467888887655 46677778877766
Q ss_pred Ec
Q 046394 178 DL 179 (378)
Q Consensus 178 d~ 179 (378)
+-
T Consensus 319 ~~ 320 (327)
T 2xbg_A 319 VT 320 (327)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 293
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.76 E-value=0.28 Score=43.83 Aligned_cols=147 Identities=12% Similarity=0.012 Sum_probs=86.9
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEe-eccCCCeeEEEE------EEEEEeCCCeEEEEEcCCC----cEEEEEecCCCCeeE
Q 046394 59 YMAAAGCKGYPYFYNRDGTELHC-SKEHGEVLKLQF------LLASINKLGQLRYQNVTMG----EIVGNFWTGLGRTDV 127 (378)
Q Consensus 59 ~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~l~~------~l~s~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~ 127 (378)
+|+.+. ...|+..++.+..... +.....+..++| ++.+-...+.|..+++... .....+......+..
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 163 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 163 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence 555554 4578888976654433 333344578888 4555556788888888652 223333334466788
Q ss_pred EEEcCCCCEEEEE-cCCCe--------------eeecCCCEEEEEEecCCCEEEEEE-C-CCeEEEEEcCCceeeeee--
Q 046394 128 IRVNPFNGVVSLG-HSGGT--------------MLCHQGPVSALAFHPNGHLMATSG-K-DCKIKIWDLRKYEVLQTL-- 188 (378)
Q Consensus 128 ~~~s~~~~~l~~~-~~d~~--------------~~~h~~~v~~~~~sp~g~~l~t~~-~-d~~i~iwd~~~~~~~~~~-- 188 (378)
+++.+.+..|+.+ ...+. +...-.....|+++|.+.+|..+. . .+.|...++.. .....+
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG-~~~~~~~~ 242 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVT 242 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS-CSCEEEEC
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC-CccEEEEE
Confidence 9999855444433 33333 222334578899999655554443 3 36788888854 333333
Q ss_pred --cCCceEEEEecCCCccccC
Q 046394 189 --PGHAKTLDFSRKDSGDFSG 207 (378)
Q Consensus 189 --~~~i~~~~~sp~g~~~~~~ 207 (378)
-...+.|+++|++....|.
T Consensus 243 ~~l~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 243 ENIQWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEE
T ss_pred CCCCceEEEEEEeCCCEEEEE
Confidence 2567899999887765553
No 294
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.70 E-value=0.25 Score=42.49 Aligned_cols=146 Identities=12% Similarity=-0.003 Sum_probs=84.2
Q ss_pred EEEEEeCCCcEEEEeCCCCe-EEeeccCCCeeEEEE------EEEEEeCCCeEEEEEcCC----CcEEEEEecCCCCeeE
Q 046394 59 YMAAAGCKGYPYFYNRDGTE-LHCSKEHGEVLKLQF------LLASINKLGQLRYQNVTM----GEIVGNFWTGLGRTDV 127 (378)
Q Consensus 59 ~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~l~~------~l~s~~~d~~i~iwd~~~----~~~~~~~~~~~~~v~~ 127 (378)
+|+.+.. ..|+..|+.+.. ...+.....+..++| ++++-..++.|..+++.. ......+......+..
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred EEEEECC-CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence 4455443 468888865543 333444445577777 555555678899999865 2222223223345688
Q ss_pred EEEcCCCCEEEEE-cCCCe--------------eeecCCCEEEEEEecCCCEEEEEE-CC-CeEEEEEcCCceeeeee--
Q 046394 128 IRVNPFNGVVSLG-HSGGT--------------MLCHQGPVSALAFHPNGHLMATSG-KD-CKIKIWDLRKYEVLQTL-- 188 (378)
Q Consensus 128 ~~~s~~~~~l~~~-~~d~~--------------~~~h~~~v~~~~~sp~g~~l~t~~-~d-~~i~iwd~~~~~~~~~~-- 188 (378)
+++++.+..|+.+ ...+. ..........++++|.+..|..+. .. +.|..+++. |.....+
T Consensus 82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~ 160 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVT 160 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEEC
T ss_pred EEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEE
Confidence 9998765544433 33222 112234678899999655544444 33 688888875 3433333
Q ss_pred --cCCceEEEEecCCCcccc
Q 046394 189 --PGHAKTLDFSRKDSGDFS 206 (378)
Q Consensus 189 --~~~i~~~~~sp~g~~~~~ 206 (378)
-...+.++++|++....|
T Consensus 161 ~~~~~P~gla~d~~~~~lY~ 180 (316)
T 1ijq_A 161 ENIQWPNGITLDLLSGRLYW 180 (316)
T ss_dssp SSCSCEEEEEEETTTTEEEE
T ss_pred CCCCCceEEEEeccCCEEEE
Confidence 245789999988765444
No 295
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.65 E-value=0.3 Score=42.76 Aligned_cols=94 Identities=17% Similarity=0.123 Sum_probs=55.8
Q ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE--Eeec----cCCCeeEEEE---------EEEEEeCC-----CeEE
Q 046394 46 LGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTEL--HCSK----EHGEVLKLQF---------LLASINKL-----GQLR 105 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~--~~~~----~~~~~~~l~~---------~l~s~~~d-----~~i~ 105 (378)
..+..|+|.|+|++ +++...|.|.+++ ++... ..+. +...+..++| ++++-... +.|.
T Consensus 31 ~~P~~ia~~pdG~l-~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 31 EVPWALAFLPDGGM-LIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp SCEEEEEECTTSCE-EEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CCceEEEEcCCCeE-EEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 56889999999984 5556679999998 54321 1111 1223477777 23332222 6788
Q ss_pred EEEcCCCc-----EE-EEEec---CCCCeeEEEEcCCCCEEEEEc
Q 046394 106 YQNVTMGE-----IV-GNFWT---GLGRTDVIRVNPFNGVVSLGH 141 (378)
Q Consensus 106 iwd~~~~~-----~~-~~~~~---~~~~v~~~~~s~~~~~l~~~~ 141 (378)
.|+...+. .+ ..+.. .......++|.|+|.++++.+
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 88876432 11 22331 112346899999997666543
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.44 E-value=0.0086 Score=58.01 Aligned_cols=141 Identities=10% Similarity=-0.021 Sum_probs=80.0
Q ss_pred CceEEEEcCCCCEEEEE-eCCCcEEEEeCCCCeEEeeccC--CCeeEEEE------EEEEEeC-CCeEEEEEcCCCcEEE
Q 046394 47 GPYTLDFTSSGRYMAAA-GCKGYPYFYNRDGTELHCSKEH--GEVLKLQF------LLASINK-LGQLRYQNVTMGEIVG 116 (378)
Q Consensus 47 ~v~~~~~sp~g~~l~~~-~~dg~i~iwd~~~~~~~~~~~~--~~~~~l~~------~l~s~~~-d~~i~iwd~~~~~~~~ 116 (378)
.+..|++.+.+..|+.+ ...+.|.+++.++..+..+... ..+..+++ ++++-.. .+.|..+++.......
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 533 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 533 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE
Confidence 45678888655444443 4567899999887766555332 23466665 3333222 3678777774322222
Q ss_pred EEecCCCCeeEEEEcCCCCEEEEEcCC-Ce-------------eee---cCCCEEEEEEecCCCEEEEEECCCeEEEEEc
Q 046394 117 NFWTGLGRTDVIRVNPFNGVVSLGHSG-GT-------------MLC---HQGPVSALAFHPNGHLMATSGKDCKIKIWDL 179 (378)
Q Consensus 117 ~~~~~~~~v~~~~~s~~~~~l~~~~~d-~~-------------~~~---h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~ 179 (378)
.+.......+.|+|+|++..|+.+... +. +.. .......|++..+ .++++....+.|..+|.
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANR 612 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEET
T ss_pred EEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEc
Confidence 222233557789999987655544332 22 110 0112234555443 44555566778999998
Q ss_pred CCceeeeee
Q 046394 180 RKYEVLQTL 188 (378)
Q Consensus 180 ~~~~~~~~~ 188 (378)
.+++.+..+
T Consensus 613 ~~G~~~~~i 621 (699)
T 1n7d_A 613 LTGSDVNLL 621 (699)
T ss_dssp TTEEEEECC
T ss_pred cCCCceEEe
Confidence 888877776
No 297
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.21 E-value=0.053 Score=47.12 Aligned_cols=170 Identities=14% Similarity=0.054 Sum_probs=95.9
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCC-CCceEEEE--cCCCCEEEEE--eCCCcEEEEeC-CCCeEEeeccC----
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPE-LGPYTLDF--TSSGRYMAAA--GCKGYPYFYNR-DGTELHCSKEH---- 85 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~-~~v~~~~~--sp~g~~l~~~--~~dg~i~iwd~-~~~~~~~~~~~---- 85 (378)
+..|..+.++.|..+|..+|+..+.+.... .++....- .+.+..++.+ +.||.|+.++. +|.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 456667789999999999999999987641 22222110 0112234433 57999999994 44333322211
Q ss_pred CCeeE------E------EE--EEEEEeCCCeEEEEEcCCCcEEEEEecCC--CC-----eeEEEEc-----CCCCEEEE
Q 046394 86 GEVLK------L------QF--LLASINKLGQLRYQNVTMGEIVGNFWTGL--GR-----TDVIRVN-----PFNGVVSL 139 (378)
Q Consensus 86 ~~~~~------l------~~--~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~-----v~~~~~s-----~~~~~l~~ 139 (378)
..+.. + .. .+++++.+|.+...|+.+|+.+..+.... +. ..|.... ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 11111 0 02 67889999999999999999999987432 10 1122211 12345555
Q ss_pred EcCCCee--eecCCCEEEEE---Ee---------------cCCCEEEEEECCCeEEEEEcCCceeee
Q 046394 140 GHSGGTM--LCHQGPVSALA---FH---------------PNGHLMATSGKDCKIKIWDLRKYEVLQ 186 (378)
Q Consensus 140 ~~~d~~~--~~h~~~v~~~~---~s---------------p~g~~l~t~~~d~~i~iwd~~~~~~~~ 186 (378)
+..+..+ .+..+.+..+. |. .++.+ +.++.||.|.-+|..+|..+.
T Consensus 171 g~~~y~v~~~~~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHSYDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECCTTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEECCCCCeEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 5444331 11122222222 21 12555 457889999999999888776
No 298
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.09 E-value=0.75 Score=44.06 Aligned_cols=93 Identities=5% Similarity=-0.010 Sum_probs=56.1
Q ss_pred eEEEEcC-CCCEEEEEeCCC-----------cEEEEeCCCCe---EEeeccCC-Ce-eEEEE-----EEEEEe-CCCeEE
Q 046394 49 YTLDFTS-SGRYMAAAGCKG-----------YPYFYNRDGTE---LHCSKEHG-EV-LKLQF-----LLASIN-KLGQLR 105 (378)
Q Consensus 49 ~~~~~sp-~g~~l~~~~~dg-----------~i~iwd~~~~~---~~~~~~~~-~~-~~l~~-----~l~s~~-~d~~i~ 105 (378)
.++++.| +|+.++.|+.+. .+.+||..... +..+.... .. .++++ +++.|+ .+..+.
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 3667777 888888887643 58889954332 22222222 11 33444 677777 456899
Q ss_pred EEEcCCCcEEEEEecCC-CCeeEEEEcCCCCEEEEEc
Q 046394 106 YQNVTMGEIVGNFWTGL-GRTDVIRVNPFNGVVSLGH 141 (378)
Q Consensus 106 iwd~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~ 141 (378)
+||..+.+....-.... ..-.+++..+++++++.|+
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECC
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeC
Confidence 99998775443221121 2224566778999999888
No 299
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.03 E-value=0.018 Score=56.30 Aligned_cols=84 Identities=13% Similarity=0.106 Sum_probs=48.6
Q ss_pred CeeEEEEc-CCCCEEEEEcC-CCe---------eeec----CCCE----EEEEEecCCCEEEEEECC-----CeEEEEEc
Q 046394 124 RTDVIRVN-PFNGVVSLGHS-GGT---------MLCH----QGPV----SALAFHPNGHLMATSGKD-----CKIKIWDL 179 (378)
Q Consensus 124 ~v~~~~~s-~~~~~l~~~~~-d~~---------~~~h----~~~v----~~~~~sp~g~~l~t~~~d-----~~i~iwd~ 179 (378)
.+...+|| |||++|+.+.. +|. +.+. ...+ .+++|+|||+.|+....| ..|.++++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 45677888 88887765443 222 1111 1122 246788888877766654 25777777
Q ss_pred CCceee--eee----cCCceEEEEecCCCccccC
Q 046394 180 RKYEVL--QTL----PGHAKTLDFSRKDSGDFSG 207 (378)
Q Consensus 180 ~~~~~~--~~~----~~~i~~~~~sp~g~~~~~~ 207 (378)
.++... ..+ ......+.|||||++.++.
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~ 288 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIG 288 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEE
T ss_pred CCCchhcEEEEecCCCceEEEEEECCCCCEEEEE
Confidence 765321 122 2334667888888875554
No 300
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.00 E-value=0.66 Score=39.85 Aligned_cols=168 Identities=12% Similarity=0.111 Sum_probs=100.3
Q ss_pred eeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC--CeEEeeccCCCe---eE
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG--TELHCSKEHGEV---LK 90 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~--~~~~~~~~~~~~---~~ 90 (378)
.+.+.+.....++++|+++.+++...... ..|.--.|-.+. .|+..+ +..|+-|++.+ .+...+.-|... .-
T Consensus 78 ~~ViALrag~~LQiFnletK~klks~~~~-e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QI 154 (365)
T 2xzh_A 78 SKVIALKAGKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQI 154 (365)
T ss_dssp SSEEEEEETTEEEEEETTTTEEEEEEECS-SCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEE
T ss_pred ccEEEEecCCeEEEechHHhhhhcceecC-CccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecchhcccceE
Confidence 45566667889999999999999888875 678788886554 444443 34799999654 566666665532 22
Q ss_pred EEE--------EEEEEe------CCCeEEEEEcCCCcEEEEEecCCCCeeE------------EEEc---CCCCEEEE--
Q 046394 91 LQF--------LLASIN------KLGQLRYQNVTMGEIVGNFWTGLGRTDV------------IRVN---PFNGVVSL-- 139 (378)
Q Consensus 91 l~~--------~l~s~~------~d~~i~iwd~~~~~~~~~~~~~~~~v~~------------~~~s---~~~~~l~~-- 139 (378)
+.| ++++|- -.|.+.+|..+.+. .+.+.+|.+.... ++|. +.|..|-.
T Consensus 155 InY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiE 233 (365)
T 2xzh_A 155 INYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIE 233 (365)
T ss_dssp EEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEE
Confidence 333 333322 23678899886543 3344444322211 1221 11211111
Q ss_pred -EcC-CCe----------ee---ecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeee
Q 046394 140 -GHS-GGT----------ML---CHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQT 187 (378)
Q Consensus 140 -~~~-d~~----------~~---~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~ 187 (378)
+.. .+. +. .-.+-..+|..|+.-..+...+.-|.|.+||+.++.++..
T Consensus 234 i~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 234 VGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp CSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred cCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEE
Confidence 111 111 00 1123345777787767888889999999999999887654
No 301
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.69 E-value=1.5 Score=41.69 Aligned_cols=158 Identities=8% Similarity=-0.070 Sum_probs=93.1
Q ss_pred ceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEE-eCCCcEEEEeCCCCeEEeec--cCCCeeEEEE------EE
Q 046394 25 AIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAA-GCKGYPYFYNRDGTELHCSK--EHGEVLKLQF------LL 95 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~-~~dg~i~iwd~~~~~~~~~~--~~~~~~~l~~------~l 95 (378)
+.|..+++........+...-..+..|++.+.+..|+.+ ...+.|.+.+.+|.....+. ....+..+++ ++
T Consensus 59 ~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY 138 (628)
T 4a0p_A 59 KTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMY 138 (628)
T ss_dssp TEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEE
T ss_pred CeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEE
Confidence 455555554332222222222457789998776656555 44678999998876554443 2234577777 33
Q ss_pred EEE-eCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe--------------eeecCCCEEEEEEec
Q 046394 96 ASI-NKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPVSALAFHP 160 (378)
Q Consensus 96 ~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--------------~~~h~~~v~~~~~sp 160 (378)
.+- +..+.|...++..... ..+.......+.|++++++..|+.+..... +.........+++..
T Consensus 139 ~tD~g~~~~I~r~~~dG~~~-~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~ 217 (628)
T 4a0p_A 139 WTEWGGKPKIDRAAMDGSER-TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQ 217 (628)
T ss_dssp EEECSSSCEEEEEETTSCSC-EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEET
T ss_pred EeCCCCCCEEEEEeCCCCce-EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEEC
Confidence 333 2356788888754333 333334567889999998776666544322 222233455777765
Q ss_pred CCCEEEEEECCCeEEEEEcCCcee
Q 046394 161 NGHLMATSGKDCKIKIWDLRKYEV 184 (378)
Q Consensus 161 ~g~~l~t~~~d~~i~iwd~~~~~~ 184 (378)
+..++|-...+.|...|..+++.
T Consensus 218 -~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 218 -DYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp -TEEEEEETTTTEEEEEETTTCCS
T ss_pred -CEEEEecCCCCEEEEEECCCCCc
Confidence 45555655678888888766543
No 302
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.61 E-value=0.8 Score=37.94 Aligned_cols=58 Identities=10% Similarity=0.043 Sum_probs=40.2
Q ss_pred eeeEEEec-cceeeeeecccceeeEEeecC-CCCceEEEEcCCCCEEEEEeCCCcEEEEeC
Q 046394 16 EKTWRIKQ-EAIAREVDILSSRNQYDIMLP-ELGPYTLDFTSSGRYMAAAGCKGYPYFYNR 74 (378)
Q Consensus 16 ~~~~~~~~-~~~i~~~d~~~~~~~~~l~~~-~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~ 74 (378)
+..|.+.+ ++.|..+|+. ++.+..+... ....-.|++.+++.++++.-.++.+.+++.
T Consensus 39 ~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 39 NTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp TEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred CEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 44555443 5777778877 7766666432 246778999998887676656788999883
No 303
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.59 E-value=0.39 Score=38.67 Aligned_cols=81 Identities=15% Similarity=0.076 Sum_probs=52.5
Q ss_pred CCeeEEEEcCCCCEEEEEcCCCeeee-cC------------CCE--------EEEEEecCCCEEEEEECCCeEEEEEcCC
Q 046394 123 GRTDVIRVNPFNGVVSLGHSGGTMLC-HQ------------GPV--------SALAFHPNGHLMATSGKDCKIKIWDLRK 181 (378)
Q Consensus 123 ~~v~~~~~s~~~~~l~~~~~d~~~~~-h~------------~~v--------~~~~~sp~g~~l~t~~~d~~i~iwd~~~ 181 (378)
..+..++|+|+|.+.++ .+|.+.. .. ..| .++.|.|+|.+.++ .||.|+-++-.+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 46779999998887777 4444211 11 122 57889999988877 569888887643
Q ss_pred ceee------eee-c---CCceEEEEecCCCccccC
Q 046394 182 YEVL------QTL-P---GHAKTLDFSRKDSGDFSG 207 (378)
Q Consensus 182 ~~~~------~~~-~---~~i~~~~~sp~g~~~~~~ 207 (378)
.... ..+ . ..+..|.|.|+|.+....
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 2111 111 1 467889999999864443
No 304
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.51 E-value=1.1 Score=39.06 Aligned_cols=30 Identities=17% Similarity=0.268 Sum_probs=21.1
Q ss_pred CCceEEEEcCCCCEEEEEe------------CCCcEEEEeCC
Q 046394 46 LGPYTLDFTSSGRYMAAAG------------CKGYPYFYNRD 75 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~~------------~dg~i~iwd~~ 75 (378)
.++-.+...|+|..+++++ .+|.|.++|..
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~ 91 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLN 91 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETT
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecC
Confidence 4566788889885544442 68999999964
No 305
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.35 E-value=1.1 Score=37.96 Aligned_cols=119 Identities=8% Similarity=-0.023 Sum_probs=57.0
Q ss_pred ceeeeeecccceeeEEeecCCCCc-eEEEEcCCCCEEEEEeCC------CcEEEEeCCCCeEEeeccCCC---e-eEEEE
Q 046394 25 AIAREVDILSSRNQYDIMLPELGP-YTLDFTSSGRYMAAAGCK------GYPYFYNRDGTELHCSKEHGE---V-LKLQF 93 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~~~~~v-~~~~~sp~g~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~---~-~~l~~ 93 (378)
..+.++|+.+.+-...-....... .+++. -++..++.|+.+ ..+.+||.....-..+..... . ..+.+
T Consensus 70 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 148 (306)
T 3ii7_A 70 KRMDCYNVVKDSWYSKLGPPTPRDSLAACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA 148 (306)
T ss_dssp CEEEEEETTTTEEEEEECCSSCCBSCEEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred ceEEEEeCCCCeEEECCCCCccccceeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE
Confidence 557778887765432222111111 12222 256677777654 468899966554443322211 1 22333
Q ss_pred ---EEEEEeC---------CCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCC
Q 046394 94 ---LLASINK---------LGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGG 144 (378)
Q Consensus 94 ---~l~s~~~---------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~ 144 (378)
+++.|+. -..+.+||+.+.+-...-..........+..-++.+++.|+.++
T Consensus 149 ~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 211 (306)
T 3ii7_A 149 NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNG 211 (306)
T ss_dssp TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEET
T ss_pred CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCC
Confidence 5555543 34588999987754322111111111111222566666666443
No 306
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.27 E-value=0.65 Score=39.97 Aligned_cols=79 Identities=6% Similarity=-0.023 Sum_probs=44.7
Q ss_pred CCeEEEEEcC---Cceeeeee------cC----------CceEEEEecCCCccccCCCC-Cc---------eEEEeec--
Q 046394 171 DCKIKIWDLR---KYEVLQTL------PG----------HAKTLDFSRKDSGDFSGSHN-YN---------RYMGYSM-- 219 (378)
Q Consensus 171 d~~i~iwd~~---~~~~~~~~------~~----------~i~~~~~sp~g~~~~~~~~~-~~---------~~~~~~~-- 219 (378)
+..|..||+. +++.+... .+ .++.++..++|...+.+... .. ....+..
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~ 178 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWES 178 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECC
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecC
Confidence 5667788887 66665444 11 36777777777765533222 11 1111111
Q ss_pred ---cCCcceeeeEEcCCCCeEEEecCCCeEEEE
Q 046394 220 ---VKGYQIGKVSFRPYEDVLGIGHSMGVSGIL 249 (378)
Q Consensus 220 ---~~~~~v~~~~~sp~g~~l~~~~~~g~~~~~ 249 (378)
......+.+.++|+|..|++....|.+..+
T Consensus 179 ~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~f 211 (334)
T 2p9w_A 179 GNGGQRPGYSGITFDPHSNKLIAFGGPRALTAF 211 (334)
T ss_dssp CCSSSCCSCSEEEEETTTTEEEEESSSSSEEEE
T ss_pred CCcccccCcceEEEeCCCCEEEEEcCCCeEEEE
Confidence 011125688999999888777667754444
No 307
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.13 E-value=0.93 Score=36.52 Aligned_cols=27 Identities=11% Similarity=-0.044 Sum_probs=20.8
Q ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEeC
Q 046394 46 LGPYTLDFTSSGRYMAAAGCKGYPYFYNR 74 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~~~dg~i~iwd~ 74 (378)
..+..++|+|+|.+.++ .+|.++-.+.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~ 67 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTP 67 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECC
Confidence 36779999999986666 6777777774
No 308
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.94 E-value=3.9 Score=41.97 Aligned_cols=154 Identities=8% Similarity=-0.031 Sum_probs=86.1
Q ss_pred cceeeeeecccceeeEEeecCC-CCceEEEE---cCC-CCEEEEEe----------CCCcEEEEeCCCCeEEeeccC--C
Q 046394 24 EAIAREVDILSSRNQYDIMLPE-LGPYTLDF---TSS-GRYMAAAG----------CKGYPYFYNRDGTELHCSKEH--G 86 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~l~~~~-~~v~~~~~---sp~-g~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~--~ 86 (378)
...++++|..+.+.+..+.... ..+.|++. ..+ ..+|++|. ..|.|++|+..+..+..+... .
T Consensus 806 ~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~ 885 (1158)
T 3ei3_A 806 VHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVK 885 (1158)
T ss_dssp EEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEES
T ss_pred eEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcC
Confidence 3567888888887766665533 34555553 322 36888886 357899999654444433221 2
Q ss_pred C-eeEEEE---EEEEEeCCCeEEEEEcCCCcEEE-EEecCCCCeeEEEEcCCCCEEEEEcCCCe----------------
Q 046394 87 E-VLKLQF---LLASINKLGQLRYQNVTMGEIVG-NFWTGLGRTDVIRVNPFNGVVSLGHSGGT---------------- 145 (378)
Q Consensus 87 ~-~~~l~~---~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~d~~---------------- 145 (378)
+ +++++- .|++|- ...|++|++...+.+. ..... ..+..+.....++++++|..-..
T Consensus 886 g~v~al~~~~g~Lla~i-g~~l~vy~l~~~~~L~~~~~~~-~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~ 963 (1158)
T 3ei3_A 886 GAVYSMVEFNGKLLASI-NSTVRLYEWTTEKELRTECNHY-NNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEI 963 (1158)
T ss_dssp SCEEEEEEETTEEEEEE-TTEEEEEEECTTSCEEEEEEEC-CCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEE
T ss_pred CcCEEEeeeCCEEEEEc-CCEEEEEECCCCceEEEEeecc-ccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEE
Confidence 3 466654 444443 3789999998665333 11111 12333333334666666654333
Q ss_pred -eeecCCCEEEEEEecCCCEEEEEECCCeEEEEEcC
Q 046394 146 -MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLR 180 (378)
Q Consensus 146 -~~~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~ 180 (378)
-..+...++++.+--++ .++.+..+|.|.++...
T Consensus 964 a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~ 998 (1158)
T 3ei3_A 964 ARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKD 998 (1158)
T ss_dssp EECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEEC
T ss_pred EeecccccEEEEEEEccC-cEEEEcCCCcEEEEecC
Confidence 11234456666665443 56667777777776553
No 309
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.90 E-value=2 Score=38.48 Aligned_cols=153 Identities=11% Similarity=0.031 Sum_probs=89.2
Q ss_pred eEEEeccceeeeeeccc-ceeeEEeecCC----CCceEEEEcCCCCEEEEEeC-------CCcEEEEeCCCCeEEeeccC
Q 046394 18 TWRIKQEAIAREVDILS-SRNQYDIMLPE----LGPYTLDFTSSGRYMAAAGC-------KGYPYFYNRDGTELHCSKEH 85 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~-~~~~~~l~~~~----~~v~~~~~sp~g~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~ 85 (378)
++.+-.+..|+.|++.. ..++..+..|. .-|..-..+++.++++..|- .|.+.+|+.+......+.+|
T Consensus 118 ~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGh 197 (494)
T 1bpo_A 118 TVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGH 197 (494)
T ss_dssp EEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCS
T ss_pred eEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheee
Confidence 34444556677787753 23333344332 23556666778887654332 46778888777777777777
Q ss_pred CCe-eEEEE--------EEEEEeC---CCeEEEEEcCCC-cEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecCCC
Q 046394 86 GEV-LKLQF--------LLASINK---LGQLRYQNVTMG-EIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGP 152 (378)
Q Consensus 86 ~~~-~~l~~--------~l~s~~~---d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~ 152 (378)
.+. ..+.. +++.+.. .+.++|.++... ..- .........+-|.|+. -.+-
T Consensus 198 aa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~---~~f~kk~vdv~fppe~--------------~~DF 260 (494)
T 1bpo_A 198 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN---QPFPKKAVDVFFPPEA--------------QNDF 260 (494)
T ss_dssp EEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTC---CCCCCEEEECCCCTTS--------------TTCC
T ss_pred eeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCC---CCccceeeeeeCCccc--------------ccCc
Confidence 654 33222 3333333 256777776432 000 0011112233344432 2344
Q ss_pred EEEEEEecCCCEEEEEECCCeEEEEEcCCceeeee
Q 046394 153 VSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQT 187 (378)
Q Consensus 153 v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~ 187 (378)
..++..|+.-..+...+.-|.|.+||+.++.++..
T Consensus 261 Pvamqvs~kygviyviTK~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 261 PVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (494)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred eeEEEecccCCEEEEEecCceEEEEecccceeeee
Confidence 56889999877899999999999999999887654
No 310
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.88 E-value=1.2 Score=37.99 Aligned_cols=83 Identities=6% Similarity=0.036 Sum_probs=44.4
Q ss_pred EEEecCCCEEEEEEC-CCeEEEEEcCCceeeeeecCCceEEEEecCCCccccCCCCC-ceEEEeeccCCcc---e---ee
Q 046394 156 LAFHPNGHLMATSGK-DCKIKIWDLRKYEVLQTLPGHAKTLDFSRKDSGDFSGSHNY-NRYMGYSMVKGYQ---I---GK 227 (378)
Q Consensus 156 ~~~sp~g~~l~t~~~-d~~i~iwd~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~-~~~~~~~~~~~~~---v---~~ 227 (378)
.+|+|+|+.|.-.+. ...|.+-++..+.....+.+... ..++|+|.+..|..... ..+..... .+.. + ..
T Consensus 150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~l-dG~~~~~Lt~~~~ 227 (302)
T 3s25_A 150 FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCNCY-KPVVLDDTNVYYMDVNRDNAIVHVNI-NNPNPVVLTEANI 227 (302)
T ss_dssp CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSCEE-EEEEEETTEEEEEEGGGTTEEEEECS-SSCCCEECSCSCE
T ss_pred eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCCcc-ceeeecCCEEEEEEcCCCcEEEEEEC-CCCCeEEEeCCCc
Confidence 456788888776654 56788888766543322333222 34668888766643221 12222221 1111 1 11
Q ss_pred eEEcCCCCeEEEe
Q 046394 228 VSFRPYEDVLGIG 240 (378)
Q Consensus 228 ~~~sp~g~~l~~~ 240 (378)
..|+|+|..|..+
T Consensus 228 ~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 228 EHYNVYGSLIFYQ 240 (302)
T ss_dssp EEEEEETTEEEEE
T ss_pred ceEEECCCEEEEE
Confidence 3478888877655
No 311
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.43 E-value=2.2 Score=36.72 Aligned_cols=111 Identities=9% Similarity=0.002 Sum_probs=70.8
Q ss_pred eeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCC-eEEeeccCCCeeEEEE----EEEEEeC
Q 046394 26 IAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGT-ELHCSKEHGEVLKLQF----LLASINK 100 (378)
Q Consensus 26 ~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~l~~----~l~s~~~ 100 (378)
.+-+.|+..+..+..-.. ..-+.-.+|..+.||.-. ...+.|+|+..+ .+..+.-...+.--.| .|+-.+
T Consensus 50 ~VvIiDl~n~~~~~Rrpi---~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT- 124 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT- 124 (365)
T ss_dssp EEEEEETTSTTSCEEEEC---CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEE-
T ss_pred EEEEEECCCCCCcccccc---ccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEc-
Confidence 566677766655422221 122556789888888765 568999996554 5555555555555555 333332
Q ss_pred CCeEEEEEcCC-CcEEEEEecCC----CCeeEEEEcCCCCEEEEEc
Q 046394 101 LGQLRYQNVTM-GEIVGNFWTGL----GRTDVIRVNPFNGVVSLGH 141 (378)
Q Consensus 101 d~~i~iwd~~~-~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~ 141 (378)
+..|+-|++.. ..++..|..|. ..|-....+++.++++..+
T Consensus 125 ~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~G 170 (365)
T 2xzh_A 125 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTG 170 (365)
T ss_dssp SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEE
T ss_pred CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEe
Confidence 46799999974 46777776653 4567778888998776543
No 312
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.41 E-value=1.5 Score=36.97 Aligned_cols=118 Identities=7% Similarity=-0.117 Sum_probs=56.0
Q ss_pred ceeeeeecccce---eeEE--eecCCCCceEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCeEEeeccCC---Ce-eE
Q 046394 25 AIAREVDILSSR---NQYD--IMLPELGPYTLDFTSSGRYMAAAGCK-----GYPYFYNRDGTELHCSKEHG---EV-LK 90 (378)
Q Consensus 25 ~~i~~~d~~~~~---~~~~--l~~~~~~v~~~~~sp~g~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~---~~-~~ 90 (378)
..+.++|+.+.. -... +....... +++. .++..++.|+.+ ..+.+||.....-..+.... .. ..
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 155 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNVRRGLA-GATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGL 155 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSSCCBSC-EEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEE
T ss_pred ceEEEEECCCCCCCeeEECCCCCCCccce-eEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceE
Confidence 457778877765 2211 11111111 2222 256666677653 35888886554433332211 11 23
Q ss_pred EEE---EEEEEeCC-----CeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCC
Q 046394 91 LQF---LLASINKL-----GQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGG 144 (378)
Q Consensus 91 l~~---~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~ 144 (378)
+.+ +++.|+.+ ..+.+||+.+.+-...-..........+..-++.+++.|+.++
T Consensus 156 ~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 217 (301)
T 2vpj_A 156 VVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDG 217 (301)
T ss_dssp EEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred EEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCC
Confidence 333 55666544 4588999887654332111111111112222566667766543
No 313
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.36 E-value=0.86 Score=41.79 Aligned_cols=114 Identities=13% Similarity=0.084 Sum_probs=70.1
Q ss_pred EEEEEeCCCeEEEEEcCCCcEEEEEecC---CCCeeEEEE-------cCCCCEEEEEcCCC-----e-----eeecC---
Q 046394 94 LLASINKLGQLRYQNVTMGEIVGNFWTG---LGRTDVIRV-------NPFNGVVSLGHSGG-----T-----MLCHQ--- 150 (378)
Q Consensus 94 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~---~~~v~~~~~-------s~~~~~l~~~~~d~-----~-----~~~h~--- 150 (378)
++++....+.|++.|+.++.....+... ......++| ++++..|+++...+ . +....
T Consensus 154 Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~ 233 (496)
T 3kya_A 154 LYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGT 233 (496)
T ss_dssp EEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSC
T ss_pred EEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCc
Confidence 3444444466888888776655444332 134788899 99998666665443 1 11011
Q ss_pred -------------CCEEEEEEec-CCCEEEEEECCCeEEEEEcC-------Ccee--------------eeee--cCCce
Q 046394 151 -------------GPVSALAFHP-NGHLMATSGKDCKIKIWDLR-------KYEV--------------LQTL--PGHAK 193 (378)
Q Consensus 151 -------------~~v~~~~~sp-~g~~l~t~~~d~~i~iwd~~-------~~~~--------------~~~~--~~~i~ 193 (378)
.....++++| ++.++++-..++.|..+|+. ++.. +..+ .....
T Consensus 234 ~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~ 313 (496)
T 3kya_A 234 FDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEF 313 (496)
T ss_dssp CSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCE
T ss_pred eeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCce
Confidence 1224677899 56666677788899999997 5543 1222 24568
Q ss_pred EEEEecCCCc-cccC
Q 046394 194 TLDFSRKDSG-DFSG 207 (378)
Q Consensus 194 ~~~~sp~g~~-~~~~ 207 (378)
.++|+|+|.+ .+.+
T Consensus 314 ~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 314 QIFIHPTGKYAYFGV 328 (496)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred EEEEcCCCCEEEEEe
Confidence 9999999984 4444
No 314
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.34 E-value=2.1 Score=36.13 Aligned_cols=119 Identities=8% Similarity=-0.053 Sum_probs=56.2
Q ss_pred ceeeeeecccceeeEEeecCCCCc-eEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCe---EEeecc---CCCeeE-E
Q 046394 25 AIAREVDILSSRNQYDIMLPELGP-YTLDFTSSGRYMAAAGCK-----GYPYFYNRDGTE---LHCSKE---HGEVLK-L 91 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~~~~~v-~~~~~sp~g~~l~~~~~d-----g~i~iwd~~~~~---~~~~~~---~~~~~~-l 91 (378)
..+.++|+.+.+-...-....... .+++ ..++..++.|+.+ ..+.+||..... -..+.. .....+ +
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~ 109 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASV-SLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGAT 109 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEE-EECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEE
Confidence 356778887765322111111111 1222 2356677777754 368999954333 222221 111123 3
Q ss_pred EE---EEEEEeCC-----CeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCC
Q 046394 92 QF---LLASINKL-----GQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGG 144 (378)
Q Consensus 92 ~~---~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~ 144 (378)
.+ +++.|+.+ ..+.+||+.+.+-...-..........+...++.+++.|+.++
T Consensus 110 ~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 170 (301)
T 2vpj_A 110 TLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDG 170 (301)
T ss_dssp EETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCS
T ss_pred EECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCC
Confidence 33 55666543 3688999887654332221111111112222566777776554
No 315
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.19 E-value=2.1 Score=37.40 Aligned_cols=32 Identities=16% Similarity=0.119 Sum_probs=25.0
Q ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 046394 46 LGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGT 77 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~ 77 (378)
..+..|+|.|+|++|+++...|.|++++.++.
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~ 49 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKG 49 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTTE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCc
Confidence 46789999999984555667899999986554
No 316
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.18 E-value=2 Score=36.29 Aligned_cols=119 Identities=15% Similarity=0.031 Sum_probs=55.2
Q ss_pred ceeeeeecccceeeEEeecCCCC-ceEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCeEEeeccCCC---eeEE-EE-
Q 046394 25 AIAREVDILSSRNQYDIMLPELG-PYTLDFTSSGRYMAAAGCKG-----YPYFYNRDGTELHCSKEHGE---VLKL-QF- 93 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~~~~~-v~~~~~sp~g~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~---~~~l-~~- 93 (378)
..+.+||..+.+-...-...... -.+++. .++..++.|+.++ .+.+||.....-..+..... ..++ .+
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 155 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVG 155 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEET
T ss_pred cceEEECCCCCceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEEC
Confidence 34667777766532221111111 112222 2566777777653 57788865554443322221 1223 33
Q ss_pred --EEEEEeC-------CCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCC
Q 046394 94 --LLASINK-------LGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGG 144 (378)
Q Consensus 94 --~l~s~~~-------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~ 144 (378)
+++.|+. -..+.+||+.+.+-...-..........+..-++.+++.|+.++
T Consensus 156 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 215 (302)
T 2xn4_A 156 GLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDG 215 (302)
T ss_dssp TEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSS
T ss_pred CEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCC
Confidence 5555543 23588999887654332111111111111122566677766544
No 317
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.62 E-value=0.11 Score=47.77 Aligned_cols=114 Identities=13% Similarity=-0.013 Sum_probs=70.5
Q ss_pred eeeeeccc----ce-eeEEeecCCCCceEEEEcCCCCEEEEEeC-CCcEEEEeCC-------CCe-------EEeeccCC
Q 046394 27 AREVDILS----SR-NQYDIMLPELGPYTLDFTSSGRYMAAAGC-KGYPYFYNRD-------GTE-------LHCSKEHG 86 (378)
Q Consensus 27 i~~~d~~~----~~-~~~~l~~~~~~v~~~~~sp~g~~l~~~~~-dg~i~iwd~~-------~~~-------~~~~~~~~ 86 (378)
+.+.|... +. ..+-+.. ...+.++.++|||+++++++. +.++.|+|.+ +.. ........
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~-pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPV-PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEE-SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred eeEEccccccccCCceEEEEeC-CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 56666654 22 2333343 366789999999999888776 8899999953 211 23333344
Q ss_pred CeeEEEE-----EEEEEeCCCeEEEEEcCCC----------cEEEEEecCCCCeeEE-----EEcCCCCEEEEEc
Q 046394 87 EVLKLQF-----LLASINKLGQLRYQNVTMG----------EIVGNFWTGLGRTDVI-----RVNPFNGVVSLGH 141 (378)
Q Consensus 87 ~~~~l~~-----~l~s~~~d~~i~iwd~~~~----------~~~~~~~~~~~~v~~~-----~~s~~~~~l~~~~ 141 (378)
++...+| ...|.--|..|.-|++... ..+..+..|..+-... .-.|+|++|++..
T Consensus 379 GPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred cccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 5678888 4556668999999999753 3556666554322211 1245566655543
No 318
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.60 E-value=1.3 Score=45.91 Aligned_cols=153 Identities=11% Similarity=0.024 Sum_probs=88.2
Q ss_pred eEEEeccceeeeeeccc-ceeeEEeecC----CCCceEEEEcCCCCEEEEEe-------CCCcEEEEeCCCCeEEeeccC
Q 046394 18 TWRIKQEAIAREVDILS-SRNQYDIMLP----ELGPYTLDFTSSGRYMAAAG-------CKGYPYFYNRDGTELHCSKEH 85 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~-~~~~~~l~~~----~~~v~~~~~sp~g~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~ 85 (378)
++.+-.+..|..|++.. ..++..+..| ..-|..-..+++.++++..| -.|.+.+|+.+......+.||
T Consensus 118 ~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegh 197 (1630)
T 1xi4_A 118 TVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGH 197 (1630)
T ss_pred eeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHh
Confidence 44444556677788753 2232233333 23466677788888766433 257888898776666666666
Q ss_pred CCe-eEEEE--------EEEEEe---CCCeEEEEEcCCC-cEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecCCC
Q 046394 86 GEV-LKLQF--------LLASIN---KLGQLRYQNVTMG-EIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGP 152 (378)
Q Consensus 86 ~~~-~~l~~--------~l~s~~---~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~ 152 (378)
.+. ..+.. +++.+. ..+.++|.++... ... .........+-|.|+. -.+-
T Consensus 198 a~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~---~~f~kk~~~~~~~~~~--------------~~Df 260 (1630)
T 1xi4_A 198 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN---QPFPKKAVDVFFPPEA--------------QNDF 260 (1630)
T ss_pred HhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCC---CCCccccccccCCccc--------------ccCc
Confidence 543 22222 222111 2357777777432 110 1111223334455432 1233
Q ss_pred EEEEEEecCCCEEEEEECCCeEEEEEcCCceeeee
Q 046394 153 VSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQT 187 (378)
Q Consensus 153 v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~ 187 (378)
..++..|+.-..+...+.-|.|.+||+.++.++..
T Consensus 261 pv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 261 PVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred ceEEEeccccCEEEEEecCceEEEEecccchhhhh
Confidence 45788888777888888999999999999988654
No 319
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.55 E-value=5.2 Score=37.96 Aligned_cols=166 Identities=11% Similarity=0.033 Sum_probs=98.2
Q ss_pred eeeEEEeccceeeeeecccceee-EEeecC-CCCceEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEee-ccC-CCeeE
Q 046394 16 EKTWRIKQEAIAREVDILSSRNQ-YDIMLP-ELGPYTLDFTSSGRYMAAAG-CKGYPYFYNRDGTELHCS-KEH-GEVLK 90 (378)
Q Consensus 16 ~~~~~~~~~~~i~~~d~~~~~~~-~~l~~~-~~~v~~~~~sp~g~~l~~~~-~dg~i~iwd~~~~~~~~~-~~~-~~~~~ 90 (378)
+..+.+.....|+..++...... ..+... -..+.+++|++.+..|+.+. ..+.|+.++.+|.....+ ... ..+..
T Consensus 317 ~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~G 396 (619)
T 3s94_A 317 TELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDG 396 (619)
T ss_dssp SEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCE
T ss_pred ceEEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCc
Confidence 34455566666777777655321 222222 24578999998666666554 477899999877543333 222 23445
Q ss_pred EEE------EEEEEeCCCeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEc-----------CCCe-----eee
Q 046394 91 LQF------LLASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGH-----------SGGT-----MLC 148 (378)
Q Consensus 91 l~~------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----------~d~~-----~~~ 148 (378)
+++ ++++-+..+.|.+.++........+.........|++.|....|+.+. .||. ...
T Consensus 397 lAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~ 476 (619)
T 3s94_A 397 IAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNT 476 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred eEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeC
Confidence 555 556666678999999864433222333456788999999754444332 2222 112
Q ss_pred cCCCEEEEEEecCCCEEEEEE-CCCeEEEEEcCC
Q 046394 149 HQGPVSALAFHPNGHLMATSG-KDCKIKIWDLRK 181 (378)
Q Consensus 149 h~~~v~~~~~sp~g~~l~t~~-~d~~i~iwd~~~ 181 (378)
.-...+.|++++++..|..+. ..+.|..+++..
T Consensus 477 ~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG 510 (619)
T 3s94_A 477 SLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDG 510 (619)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEESSS
T ss_pred CCCCCeeeEEcccCCEEEEEECCCCEEEEEecCC
Confidence 234667899998655555544 456788888753
No 320
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.02 E-value=5.1 Score=36.34 Aligned_cols=30 Identities=13% Similarity=0.088 Sum_probs=22.1
Q ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 046394 46 LGPYTLDFTSSGRYMAAAGCKGYPYFYNRD 75 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~ 75 (378)
..+.+|+|.|+|+++++-...+.|++++..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~ 56 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPE 56 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECC
Confidence 567899999999866654333469888853
No 321
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.49 E-value=3 Score=35.20 Aligned_cols=90 Identities=7% Similarity=-0.158 Sum_probs=47.7
Q ss_pred cceeeeeecccceeeEE--eecCCCCceEEEEcCCCCEEEEEeCC----CcEEEEeCCCCeEEeeccCCC---e-eEEEE
Q 046394 24 EAIAREVDILSSRNQYD--IMLPELGPYTLDFTSSGRYMAAAGCK----GYPYFYNRDGTELHCSKEHGE---V-LKLQF 93 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~~~--l~~~~~~v~~~~~sp~g~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~---~-~~l~~ 93 (378)
...+.+||..+.+-... +......- +++. -++..++.|+.+ ..+.+||.....-..+..... . ..+.+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 100 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDA-ACVF-WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA 100 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSC-EEEE-ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE
T ss_pred CceEEEecCCCCCEecCCCCCccccee-EEEE-ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE
Confidence 34677788877654321 11111111 2222 356667777654 578889965544333322211 1 22333
Q ss_pred ---EEEEEeCC------CeEEEEEcCCCcEE
Q 046394 94 ---LLASINKL------GQLRYQNVTMGEIV 115 (378)
Q Consensus 94 ---~l~s~~~d------~~i~iwd~~~~~~~ 115 (378)
+++.|+.+ ..+.+||+.+.+-.
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 66666654 45889998876543
No 322
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.48 E-value=5 Score=34.90 Aligned_cols=56 Identities=14% Similarity=0.134 Sum_probs=33.3
Q ss_pred CCEEEEEEecC---CCE-EEEEECC-----CeEEEEEcCCce-----ee-eeec------CCceEEEEecCCCcccc
Q 046394 151 GPVSALAFHPN---GHL-MATSGKD-----CKIKIWDLRKYE-----VL-QTLP------GHAKTLDFSRKDSGDFS 206 (378)
Q Consensus 151 ~~v~~~~~sp~---g~~-l~t~~~d-----~~i~iwd~~~~~-----~~-~~~~------~~i~~~~~sp~g~~~~~ 206 (378)
.....|+|+|+ +.. +++-+.. +.|..|++..+. .+ ..++ .....++|+|||...+.
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 151 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVT 151 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEE
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEE
Confidence 45788999997 444 4443332 567788776431 11 1122 13478999999976444
No 323
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=92.45 E-value=4.3 Score=34.12 Aligned_cols=90 Identities=13% Similarity=0.021 Sum_probs=45.4
Q ss_pred ceeeeeecccceeeEEeecCCCCc-eEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCeEEeeccCCC---e-eEEEE-
Q 046394 25 AIAREVDILSSRNQYDIMLPELGP-YTLDFTSSGRYMAAAGCK-----GYPYFYNRDGTELHCSKEHGE---V-LKLQF- 93 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~~~~~v-~~~~~sp~g~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~---~-~~l~~- 93 (378)
..+.++|+.+..-...-....... .+++. -++..++.|+.+ ..+.+||.....-..+..... . ..+.+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 108 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLN 108 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEEC
Confidence 346778887765322111111111 12222 256667777654 358889965554444332221 1 22333
Q ss_pred --EEEEEeCC-----CeEEEEEcCCCcEE
Q 046394 94 --LLASINKL-----GQLRYQNVTMGEIV 115 (378)
Q Consensus 94 --~l~s~~~d-----~~i~iwd~~~~~~~ 115 (378)
+++.|+.+ ..+.+||+.+.+-.
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence 55666644 35778888776543
No 324
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=92.42 E-value=9.8 Score=38.16 Aligned_cols=38 Identities=18% Similarity=0.369 Sum_probs=33.9
Q ss_pred CCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee
Q 046394 151 GPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188 (378)
Q Consensus 151 ~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~ 188 (378)
..+.+++..++..+++|.+.|+++|||++.+++++.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 45778888888899999999999999999999998876
No 325
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.34 E-value=3 Score=35.29 Aligned_cols=117 Identities=9% Similarity=-0.158 Sum_probs=55.1
Q ss_pred ceeeeeecccceeeEEeecCCCCc-eEEEEcCCCCEEEEEeC----C-----CcEEEEeCCCCeEEeeccCCC--e--eE
Q 046394 25 AIAREVDILSSRNQYDIMLPELGP-YTLDFTSSGRYMAAAGC----K-----GYPYFYNRDGTELHCSKEHGE--V--LK 90 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~~~~~v-~~~~~sp~g~~l~~~~~----d-----g~i~iwd~~~~~~~~~~~~~~--~--~~ 90 (378)
..+.++|..+.+-...-....... .+++. .++..++.|+. + ..+.+||.....-..+..... . ..
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 117 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGV 117 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEE
Confidence 456778877765432211111111 12222 25666666665 2 468889965554444332211 1 22
Q ss_pred EEE---EEEEEeCC-----CeEEEEEcCCCcEEEEEecCC--CCeeEEEEcCCCCEEEEEcCCC
Q 046394 91 LQF---LLASINKL-----GQLRYQNVTMGEIVGNFWTGL--GRTDVIRVNPFNGVVSLGHSGG 144 (378)
Q Consensus 91 l~~---~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~d~ 144 (378)
+.+ +++.|+.+ ..+.+||+.+.+-...-.... ....++.+ ++.+++.|+.++
T Consensus 118 ~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 179 (308)
T 1zgk_A 118 GVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDG 179 (308)
T ss_dssp EEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCC
Confidence 333 55555532 458889987765432211111 11122222 566666666543
No 326
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.27 E-value=4.2 Score=34.41 Aligned_cols=88 Identities=11% Similarity=-0.069 Sum_probs=44.9
Q ss_pred ceeeeeecccceeeEE--eecCCCCceEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCeEEeeccCCC---e-eEEEE
Q 046394 25 AIAREVDILSSRNQYD--IMLPELGPYTLDFTSSGRYMAAAGCK-----GYPYFYNRDGTELHCSKEHGE---V-LKLQF 93 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~--l~~~~~~v~~~~~sp~g~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~---~-~~l~~ 93 (378)
..+.++|+.+.+-... +........++.+ ++..++.|+.+ ..+.+||.....-..+..... . ..+.+
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 167 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL 167 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE
Confidence 3467788776653221 1111111222222 56666666643 368889865554443322211 1 23333
Q ss_pred ---EEEEEeCC-----CeEEEEEcCCCcE
Q 046394 94 ---LLASINKL-----GQLRYQNVTMGEI 114 (378)
Q Consensus 94 ---~l~s~~~d-----~~i~iwd~~~~~~ 114 (378)
+++.|+.+ ..+.+||+.+.+-
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 196 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEW 196 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeE
Confidence 55666543 4588999877654
No 327
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.11 E-value=5.6 Score=34.63 Aligned_cols=31 Identities=16% Similarity=0.240 Sum_probs=24.7
Q ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 046394 46 LGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGT 77 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~ 77 (378)
..+..|+|.|+|+ |+++..+|.|++++.++.
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d~~G~ 59 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLISPSGK 59 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEECSSCE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEeCCCc
Confidence 5688999999997 555567799999986665
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.26 E-value=5 Score=34.00 Aligned_cols=116 Identities=11% Similarity=-0.124 Sum_probs=54.0
Q ss_pred eeeeecccceeeEE--eecCCCCceEEEEcCCCCEEEEEeCC--------CcEEEEeCCCCeEEeeccCCC---e-eEEE
Q 046394 27 AREVDILSSRNQYD--IMLPELGPYTLDFTSSGRYMAAAGCK--------GYPYFYNRDGTELHCSKEHGE---V-LKLQ 92 (378)
Q Consensus 27 i~~~d~~~~~~~~~--l~~~~~~v~~~~~sp~g~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~---~-~~l~ 92 (378)
+..||..+.+-... +....... +++.. ++..++.|+.+ ..+.+||.....-..+..... . ..+.
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 146 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLF-GLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS 146 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESC-EEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred eEEecCCCCeEEECCCCCcchhce-eEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE
Confidence 66778777653221 11111111 22222 45666666632 368899965544333322111 1 2233
Q ss_pred E---EEEEEeC-C-----CeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcCCC
Q 046394 93 F---LLASINK-L-----GQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGG 144 (378)
Q Consensus 93 ~---~l~s~~~-d-----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~ 144 (378)
+ +++.|+. + ..+.+||+.+.+-...-..........+..-++.+++.|+.++
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 207 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTD 207 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECS
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCC
Confidence 3 5666665 2 4688999887653322111111111112222566666666544
No 329
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=91.01 E-value=16 Score=37.62 Aligned_cols=125 Identities=14% Similarity=-0.004 Sum_probs=70.2
Q ss_pred eeEEEeccceeeeeecccceeeEEeecCC-CCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEe---eccCCCeeEEE
Q 046394 17 KTWRIKQEAIAREVDILSSRNQYDIMLPE-LGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHC---SKEHGEVLKLQ 92 (378)
Q Consensus 17 ~~~~~~~~~~i~~~d~~~~~~~~~l~~~~-~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~---~~~~~~~~~l~ 92 (378)
..+.+...+ |++.+......+..+.... ..|...+.+ +.+++.++ ++.+.++.++...+.. ..-...+.|++
T Consensus 485 ~ivQVt~~~-Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~ 560 (1158)
T 3ei3_A 485 QLIQITSAS-VRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLD 560 (1158)
T ss_dssp EEEEEESSC-EEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEE
T ss_pred eEEEEecCE-EEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEE
Confidence 344444333 4555554444555554432 346666554 34677665 5677777643222221 22223457776
Q ss_pred E-----------EEEEEeC-CCeEEEEEcCCCcEEEEEecC-CCCeeEEEEc--CCCCEEEEEcCCCe
Q 046394 93 F-----------LLASINK-LGQLRYQNVTMGEIVGNFWTG-LGRTDVIRVN--PFNGVVSLGHSGGT 145 (378)
Q Consensus 93 ~-----------~l~s~~~-d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s--~~~~~l~~~~~d~~ 145 (378)
+ +++.|.. |++|+|+++.+.+.+...... ...+.++.+. ....+|.+|..||.
T Consensus 561 i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~ 628 (1158)
T 3ei3_A 561 ITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGA 628 (1158)
T ss_dssp CCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSE
T ss_pred eecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCe
Confidence 6 6777775 999999999887766544322 1234444333 23357888888887
No 330
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=90.22 E-value=7.8 Score=32.87 Aligned_cols=64 Identities=19% Similarity=0.079 Sum_probs=38.8
Q ss_pred EEEEcCCCCEEEEEe----CCCcEEEEeCCCCeEEeeccCCCeeEEEE----EEEEEeCCCeEEEEEcCCCcE
Q 046394 50 TLDFTSSGRYMAAAG----CKGYPYFYNRDGTELHCSKEHGEVLKLQF----LLASINKLGQLRYQNVTMGEI 114 (378)
Q Consensus 50 ~~~~sp~g~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~l~~----~l~s~~~d~~i~iwd~~~~~~ 114 (378)
+..|++++.+|+... ....|+..+++|.....+..+.. ..+.| ++.+......|...++..+..
T Consensus 108 ~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~-~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~ 179 (302)
T 3s25_A 108 CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL-FTCNTSDRYFYYNNPKNGQLYRYDTASQSE 179 (302)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC-CCSEEETTEEEEECTTTCCEEEEETTTTEE
T ss_pred ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc-eEeeEECCEEEEEeCCCceEEEEECCCCCE
Confidence 347788898888776 23456666677766666655533 23345 333433456788888765543
No 331
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.18 E-value=10 Score=34.26 Aligned_cols=17 Identities=18% Similarity=0.282 Sum_probs=12.1
Q ss_pred eeeeEEcCCCCeEEEec
Q 046394 225 IGKVSFRPYEDVLGIGH 241 (378)
Q Consensus 225 v~~~~~sp~g~~l~~~~ 241 (378)
...++|+|+|.+.++-.
T Consensus 230 p~gla~dp~G~L~~~d~ 246 (454)
T 1cru_A 230 PQGLAFTPNGKLLQSEQ 246 (454)
T ss_dssp EEEEEECTTSCEEEEEE
T ss_pred cceEEECCCCCEEEEec
Confidence 56788999887666543
No 332
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=90.11 E-value=4.2 Score=42.33 Aligned_cols=111 Identities=9% Similarity=-0.002 Sum_probs=63.8
Q ss_pred eeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC-CeEEeeccCCCeeEEEE----EEEEEeC
Q 046394 26 IAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG-TELHCSKEHGEVLKLQF----LLASINK 100 (378)
Q Consensus 26 ~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~l~~----~l~s~~~ 100 (378)
.+-+.|+..+..+..-. -..-+.-.+|..+.||.-. ..++.|+|+.. ..+..+.-...+.--.| .++-. .
T Consensus 49 ~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lV-T 123 (1630)
T 1xi4_A 49 QVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALV-T 123 (1630)
T ss_pred eEEEEECCCCCCccccc---ccchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEE-c
Confidence 55666666554431111 1122455788888777664 66899999643 33444443444444444 33322 3
Q ss_pred CCeEEEEEcCC-CcEEEEEecC----CCCeeEEEEcCCCCEEEEEc
Q 046394 101 LGQLRYQNVTM-GEIVGNFWTG----LGRTDVIRVNPFNGVVSLGH 141 (378)
Q Consensus 101 d~~i~iwd~~~-~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~ 141 (378)
+..|+-|++.. ..++..|..| ...|.....+++.++++..+
T Consensus 124 ~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~g 169 (1630)
T 1xi4_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTG 169 (1630)
T ss_pred CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEe
Confidence 46799999963 3454445444 35677778888888776543
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=89.04 E-value=9.1 Score=32.39 Aligned_cols=86 Identities=13% Similarity=0.011 Sum_probs=42.6
Q ss_pred eeeeecccceeeEE--eecCCCCceEEEEcCCCCEEEEEeCC-------CcEEEEeCCCCeEEeeccCCC--e-eEE-EE
Q 046394 27 AREVDILSSRNQYD--IMLPELGPYTLDFTSSGRYMAAAGCK-------GYPYFYNRDGTELHCSKEHGE--V-LKL-QF 93 (378)
Q Consensus 27 i~~~d~~~~~~~~~--l~~~~~~v~~~~~sp~g~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~--~-~~l-~~ 93 (378)
+.++|..+.+-... +...... .+++.. ++..++.|+.+ ..+.+||.....-..+..... . .++ .+
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 157 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCL-FGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISH 157 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCS-CEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEE
T ss_pred EEEEeCCCCcEEECCCCCccccc-cceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEE
Confidence 56677766653221 1111111 122222 56666777653 257888865554443322221 1 222 23
Q ss_pred ---EEEEEeC------CCeEEEEEcCCCcE
Q 046394 94 ---LLASINK------LGQLRYQNVTMGEI 114 (378)
Q Consensus 94 ---~l~s~~~------d~~i~iwd~~~~~~ 114 (378)
+++.|+. -..+.+||+.+.+-
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 5555553 23588999887654
No 334
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=88.46 E-value=12 Score=32.54 Aligned_cols=58 Identities=10% Similarity=-0.023 Sum_probs=32.1
Q ss_pred eEEEeccceeeeeecccce-eeEEee---cCCCCceEEEEcCC---CCEEEEEeC----C----CcEEEEeCCC
Q 046394 18 TWRIKQEAIAREVDILSSR-NQYDIM---LPELGPYTLDFTSS---GRYMAAAGC----K----GYPYFYNRDG 76 (378)
Q Consensus 18 ~~~~~~~~~i~~~d~~~~~-~~~~l~---~~~~~v~~~~~sp~---g~~l~~~~~----d----g~i~iwd~~~ 76 (378)
.|.....+.|.++|. ++. .+..+. .....+..|+|+|+ +..|+++.. + +.|..|+.++
T Consensus 42 l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~ 114 (354)
T 3a9g_A 42 YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDG 114 (354)
T ss_dssp EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECS
T ss_pred EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECC
Confidence 444444567777763 343 222221 12356889999997 445554433 2 5677777544
No 335
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=87.93 E-value=13 Score=32.37 Aligned_cols=71 Identities=8% Similarity=0.103 Sum_probs=37.4
Q ss_pred ccceeeeeecccc--e-eeEEeec-----CCCCceEEEEcC--CCC-EEEEEe-C--CCcEEEEe--CCCCeEE---eec
Q 046394 23 QEAIAREVDILSS--R-NQYDIML-----PELGPYTLDFTS--SGR-YMAAAG-C--KGYPYFYN--RDGTELH---CSK 83 (378)
Q Consensus 23 ~~~~i~~~d~~~~--~-~~~~l~~-----~~~~v~~~~~sp--~g~-~l~~~~-~--dg~i~iwd--~~~~~~~---~~~ 83 (378)
.++.|.++|..+. + ....+.+ ....+..|.+.+ +|. +|+++. . +..|.+|+ ..+.... .+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 5788889998732 1 1223333 224677888866 454 455443 2 45677777 4444332 333
Q ss_pred cCC--CeeEEEE
Q 046394 84 EHG--EVLKLQF 93 (378)
Q Consensus 84 ~~~--~~~~l~~ 93 (378)
+.. .++++.+
T Consensus 161 g~~~~~pND~~v 172 (355)
T 3sre_A 161 HKLLPSVNDIVA 172 (355)
T ss_dssp CTTCSSEEEEEE
T ss_pred cCCCCCCceEEE
Confidence 322 2366666
No 336
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=87.59 E-value=18 Score=33.65 Aligned_cols=86 Identities=10% Similarity=0.035 Sum_probs=56.9
Q ss_pred EEEEeCCCcEEEEe-CCCCeEEeeccC--------------------------CCe--eEEEE---------EEEEEeCC
Q 046394 60 MAAAGCKGYPYFYN-RDGTELHCSKEH--------------------------GEV--LKLQF---------LLASINKL 101 (378)
Q Consensus 60 l~~~~~dg~i~iwd-~~~~~~~~~~~~--------------------------~~~--~~l~~---------~l~s~~~d 101 (378)
+.+|+..|.|+|+- .+++.+..+.-. .+. ..+++ +++-.-.+
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 66888899999999 666666554211 011 22333 55555567
Q ss_pred CeEEEEEcCCCcEEEEEec-CCCCeeEEEEc--CCCCEEEEEcCCCe
Q 046394 102 GQLRYQNVTMGEIVGNFWT-GLGRTDVIRVN--PFNGVVSLGHSGGT 145 (378)
Q Consensus 102 ~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s--~~~~~l~~~~~d~~ 145 (378)
..|-..++...++-..+.. ....+..++|- |...++++++....
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~ 199 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFII 199 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCE
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeec
Confidence 7888888888877665543 34667788886 67788888776554
No 337
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=87.54 E-value=18 Score=33.54 Aligned_cols=163 Identities=14% Similarity=0.139 Sum_probs=96.9
Q ss_pred ceeeeeecccceeeEEeec--------CCCCceEEEEcCCCC-EEEEEeCCCc---------------------------
Q 046394 25 AIAREVDILSSRNQYDIML--------PELGPYTLDFTSSGR-YMAAAGCKGY--------------------------- 68 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~--------~~~~v~~~~~sp~g~-~l~~~~~dg~--------------------------- 68 (378)
..|.+|++. ++.++.+.. |-..+....|.-||+ -|++...+|+
T Consensus 151 ~~l~aY~ld-G~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpE 229 (591)
T 2zux_A 151 VLIDAYKLD-GTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPE 229 (591)
T ss_dssp CEEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCC
T ss_pred cEEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCc
Confidence 467788885 666666653 233466777777885 5777766665
Q ss_pred -EEEEe-CCCCeEEeeccCC--C----------------eeEEEE------EEEEEe---CCCeEEEEEcCCCcEE--EE
Q 046394 69 -PYFYN-RDGTELHCSKEHG--E----------------VLKLQF------LLASIN---KLGQLRYQNVTMGEIV--GN 117 (378)
Q Consensus 69 -i~iwd-~~~~~~~~~~~~~--~----------------~~~l~~------~l~s~~---~d~~i~iwd~~~~~~~--~~ 117 (378)
|.|+| .+|..+.++.-.. + ..++++ .++.+- .-..|..||...++.. ..
T Consensus 230 yL~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~ 309 (591)
T 2zux_A 230 YLTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWT 309 (591)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEE
T ss_pred EEEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEE
Confidence 78999 6888877654321 1 022333 222222 1235888998877653 33
Q ss_pred EecCC-----------CCeeEEEEcCCCC-EEEEEc----CCCe-----eeecCCCEEEEEEecC--CCEEEEEECCC--
Q 046394 118 FWTGL-----------GRTDVIRVNPFNG-VVSLGH----SGGT-----MLCHQGPVSALAFHPN--GHLMATSGKDC-- 172 (378)
Q Consensus 118 ~~~~~-----------~~v~~~~~s~~~~-~l~~~~----~d~~-----~~~h~~~v~~~~~sp~--g~~l~t~~~d~-- 172 (378)
+.... ..+....+.-||. .|+.|+ .||. -.+|...+....|.|+ |..++.+..++
T Consensus 310 ~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs~~iD~dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~~~E~~~~ 389 (591)
T 2zux_A 310 LDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGSMAVDHDGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQVHEDKNA 389 (591)
T ss_dssp EETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETTEEECTTSCEEEECSCCCCSCEEEECCCTTSSSCEEEEECCCTTS
T ss_pred ecCCCCCcccccccCCCCCeeEeCCCCCCceEEEeeeEECCCCCEeeeCCCCCCCeeEEeecCCCCCCcEEEEEecCCCC
Confidence 43321 2333344555553 333332 3333 2378888888889996 55677776652
Q ss_pred --eEEEEEcCCceeeeee
Q 046394 173 --KIKIWDLRKYEVLQTL 188 (378)
Q Consensus 173 --~i~iwd~~~~~~~~~~ 188 (378)
-..+.|.++|+.+...
T Consensus 390 ~~G~~~~dA~tG~vlw~~ 407 (591)
T 2zux_A 390 KYGLSFRDAATGKILWGV 407 (591)
T ss_dssp SCSEEEEETTTCCEEEEE
T ss_pred CCccEEEECCCCcEEEEc
Confidence 3556899999998776
No 338
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=86.96 E-value=6.3 Score=34.08 Aligned_cols=114 Identities=13% Similarity=0.070 Sum_probs=66.8
Q ss_pred CEEEEEeCCCcEEEEe-CCCCeEEeeccC--CCeeEEE--------EEEEE-EeCCCeEEEEEcCCCcEEEEEecCCCCe
Q 046394 58 RYMAAAGCKGYPYFYN-RDGTELHCSKEH--GEVLKLQ--------FLLAS-INKLGQLRYQNVTMGEIVGNFWTGLGRT 125 (378)
Q Consensus 58 ~~l~~~~~dg~i~iwd-~~~~~~~~~~~~--~~~~~l~--------~~l~s-~~~d~~i~iwd~~~~~~~~~~~~~~~~v 125 (378)
..+++++.||.|+-+| .+|+.+..+... ..+.... ..++. .+.||.|..+|..+|.....+.... .+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~-lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ-LV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH-HH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc-ce
Confidence 4788889999999999 678888887665 1222211 12222 2578999999988875544333110 00
Q ss_pred eEEEEcCCCCEEEEEcCCCeeeecCCCEE-EEEEecCCCEEEEEECCCeEEEEEcCCceeeeee
Q 046394 126 DVIRVNPFNGVVSLGHSGGTMLCHQGPVS-ALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188 (378)
Q Consensus 126 ~~~~~s~~~~~l~~~~~d~~~~~h~~~v~-~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~ 188 (378)
. .+| +.....+|. ..--...+..+++++.+|.+...|+.+|+.+..+
T Consensus 90 ~---~SP-------------~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 90 S---TSP-------------LHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp T---TCS-------------EEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred e---ccc-------------cccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 0 000 001111111 0000013457889999999999999999999888
No 339
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=84.33 E-value=24 Score=32.01 Aligned_cols=31 Identities=16% Similarity=0.221 Sum_probs=24.9
Q ss_pred CCceEEEEcCCCC-EEEEEeCCCcEEEEeCCC
Q 046394 46 LGPYTLDFTSSGR-YMAAAGCKGYPYFYNRDG 76 (378)
Q Consensus 46 ~~v~~~~~sp~g~-~l~~~~~dg~i~iwd~~~ 76 (378)
..+..|+|.|+|. .|+++...|.|++++.++
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g 45 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEG 45 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTS
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCC
Confidence 4678999999996 566667899999998554
No 340
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=84.28 E-value=18 Score=30.50 Aligned_cols=117 Identities=9% Similarity=-0.094 Sum_probs=58.6
Q ss_pred ceeeeeecccceeeEEeec--CCCCceEEEEcCCCCEEEEEeC----CC-------cEEEEeCCCCeEEeeccCCCe---
Q 046394 25 AIAREVDILSSRNQYDIML--PELGPYTLDFTSSGRYMAAAGC----KG-------YPYFYNRDGTELHCSKEHGEV--- 88 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~--~~~~v~~~~~sp~g~~l~~~~~----dg-------~i~iwd~~~~~~~~~~~~~~~--- 88 (378)
..+.+||..+.+-.. ... +.......+...++..++.|+. ++ .+.+||.....-..+......
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 91 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCL 91 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEES
T ss_pred CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhc
Confidence 567888988877432 222 1122233334456777777773 11 277888655544443322211
Q ss_pred eEEE-E---EEEEEeCC--------CeEEEEEcCCCcEEEEEecCCCCeeEEEEcCCCCEEEEEcC
Q 046394 89 LKLQ-F---LLASINKL--------GQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHS 142 (378)
Q Consensus 89 ~~l~-~---~l~s~~~d--------~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 142 (378)
.+++ + +++.|+.+ ..+.+||+.+.+-...-..........+...++.+++.|+.
T Consensus 92 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 157 (315)
T 4asc_A 92 FGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGK 157 (315)
T ss_dssp CEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred eeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCC
Confidence 2232 3 55555532 45889998876533221111111222222345566666665
No 341
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=81.98 E-value=25 Score=30.48 Aligned_cols=35 Identities=9% Similarity=0.044 Sum_probs=26.1
Q ss_pred eecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 046394 41 IMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRD 75 (378)
Q Consensus 41 l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~ 75 (378)
+...-..+..|+|.|+|+++++--..|.|++++..
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~ 61 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAK 61 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECC
Confidence 33334578899999999866665448999999854
No 342
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=81.34 E-value=3.5 Score=42.35 Aligned_cols=38 Identities=18% Similarity=0.369 Sum_probs=32.7
Q ss_pred CCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee
Q 046394 151 GPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188 (378)
Q Consensus 151 ~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~ 188 (378)
..+.+++..++..+++|.+.|+++|||++.+++++.+.
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 34556677788899999999999999999999998876
No 343
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=80.36 E-value=33 Score=30.90 Aligned_cols=214 Identities=10% Similarity=0.018 Sum_probs=118.4
Q ss_pred ceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCC-CeEEeeccCCCeeEEEE----EEEEEe
Q 046394 25 AIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDG-TELHCSKEHGEVLKLQF----LLASIN 99 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~l~~----~l~s~~ 99 (378)
..+-+.|+..+..+..-.. ..-+.-.+|..+.||.-. ..++.|+|+.. ..+..+.-...+.--.| .|+-.
T Consensus 48 ~~vvIiDl~~~~~~~rrpi---~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lV- 122 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALV- 122 (494)
T ss_dssp CEEEEEETTSTTSCEEEEC---CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEE-
T ss_pred CeEEEEECCCCCcceeccc---ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEE-
Confidence 3566666666554422211 122566789888777765 66899999654 45555555555555555 33333
Q ss_pred CCCeEEEEEcCC-CcEEEEEecCC----CCeeEEEEcCCCCEEEEEc---CCCe-----------------eeecCCCEE
Q 046394 100 KLGQLRYQNVTM-GEIVGNFWTGL----GRTDVIRVNPFNGVVSLGH---SGGT-----------------MLCHQGPVS 154 (378)
Q Consensus 100 ~d~~i~iwd~~~-~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~---~d~~-----------------~~~h~~~v~ 154 (378)
.+..|+-|++.. ..++..|..|. ..|.....+++.++++..+ .++. +.+|.+...
T Consensus 123 T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~ 202 (494)
T 1bpo_A 123 TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFA 202 (494)
T ss_dssp CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEE
T ss_pred cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeE
Confidence 356899999964 45777776653 4567778889999776543 2333 445544333
Q ss_pred EEEEecC---CCEEEEEECC---CeEEEEEcCCc---ee-e----eee-------cCCceEEEEecCC----------Cc
Q 046394 155 ALAFHPN---GHLMATSGKD---CKIKIWDLRKY---EV-L----QTL-------PGHAKTLDFSRKD----------SG 203 (378)
Q Consensus 155 ~~~~sp~---g~~l~t~~~d---~~i~iwd~~~~---~~-~----~~~-------~~~i~~~~~sp~g----------~~ 203 (378)
.+.+..+ .+.|+.+... +.+.|-++... .. . ..+ ..-..++..|+.- ..
T Consensus 203 ~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i 282 (494)
T 1bpo_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI 282 (494)
T ss_dssp EEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEE
T ss_pred EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceE
Confidence 3322211 1244545443 68888888542 11 1 011 1223445555432 23
Q ss_pred cccCCCCCceEEEeeccCCcceeeeEEcCCCCeEEEecCCC
Q 046394 204 DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMG 244 (378)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~~g 244 (378)
.+++..++.+++..+- ...+|...+.+....-++.-...|
T Consensus 283 ~lyDleTgt~i~~nrI-s~~~iF~t~~~~~~~Gi~~Vnr~G 322 (494)
T 1bpo_A 283 HLYDLETGTCIYMNRI-SGETIFVTAPHEATAGIIGVNRKG 322 (494)
T ss_dssp EEEETTTCCEEEEEEC-CSSCEEEEEEETTTTEEEEEETTC
T ss_pred EEEecccceeeeeecc-cCCceEEecccCCCCcEEEEccCc
Confidence 5666666666666655 555565555544444444444555
No 344
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=80.04 E-value=29 Score=30.01 Aligned_cols=25 Identities=20% Similarity=0.057 Sum_probs=18.0
Q ss_pred cceeeeEEcCCCCeEEEec-CCCeEE
Q 046394 223 YQIGKVSFRPYEDVLGIGH-SMGVSG 247 (378)
Q Consensus 223 ~~v~~~~~sp~g~~l~~~~-~~g~~~ 247 (378)
..+.++++.|||.++++.. .+|.+.
T Consensus 323 ~rp~~v~~~pdG~lyv~td~~~g~I~ 348 (353)
T 2g8s_A 323 QRIRDVRTGPDGYLYVLTDESSGELL 348 (353)
T ss_dssp CCEEEEEECTTSCEEEEECSTTEEEE
T ss_pred CceeEEEECCCCcEEEEEeCCCCEEE
Confidence 4688999999998777644 456443
No 345
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=79.06 E-value=37 Score=30.72 Aligned_cols=14 Identities=14% Similarity=-0.126 Sum_probs=10.2
Q ss_pred CceEEEEecCCCcc
Q 046394 191 HAKTLDFSRKDSGD 204 (378)
Q Consensus 191 ~i~~~~~sp~g~~~ 204 (378)
....|.|.|||.+.
T Consensus 140 ~g~~l~fgpDG~LY 153 (463)
T 2wg3_C 140 LGGQLLFGPDGFLY 153 (463)
T ss_dssp CEEEEEECTTSCEE
T ss_pred cCCcEeECCCCcEE
Confidence 35778888888753
No 346
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=78.30 E-value=31 Score=29.49 Aligned_cols=46 Identities=13% Similarity=0.039 Sum_probs=24.7
Q ss_pred CCCEEEEEeC-C---------CcEEEEeCCCCeEEeeccCC-C--e--eEEEE---EEEEEeCC
Q 046394 56 SGRYMAAAGC-K---------GYPYFYNRDGTELHCSKEHG-E--V--LKLQF---LLASINKL 101 (378)
Q Consensus 56 ~g~~l~~~~~-d---------g~i~iwd~~~~~~~~~~~~~-~--~--~~l~~---~l~s~~~d 101 (378)
++..++.|+. + ..+.+||.....-..+.... . . .++.+ +++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 4666666665 2 46889996655444333222 1 1 22334 66677654
No 347
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=77.70 E-value=7.8 Score=37.13 Aligned_cols=34 Identities=26% Similarity=0.688 Sum_probs=28.1
Q ss_pred EEEEEEecCCCEEEEEECCCeEEEEEcCCceeeeee
Q 046394 153 VSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188 (378)
Q Consensus 153 v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~~ 188 (378)
|.++.+ +..++++.+.|.++|+||+.+++++.+.
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 444433 4679999999999999999999988776
No 348
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=76.47 E-value=33 Score=28.79 Aligned_cols=98 Identities=8% Similarity=0.015 Sum_probs=50.2
Q ss_pred eeEEEeccceeeeeecccceeeEE-eecCCCCceEEEEcCCCCEEEEEeC----CC-------cEEEEeCCCCeEEeecc
Q 046394 17 KTWRIKQEAIAREVDILSSRNQYD-IMLPELGPYTLDFTSSGRYMAAAGC----KG-------YPYFYNRDGTELHCSKE 84 (378)
Q Consensus 17 ~~~~~~~~~~i~~~d~~~~~~~~~-l~~~~~~v~~~~~sp~g~~l~~~~~----dg-------~i~iwd~~~~~~~~~~~ 84 (378)
..+.+.. ..+..||..+.+-... +..............++..++.|+. ++ .+.+||.....-..+..
T Consensus 17 ~i~~~GG-~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 17 LILLVND-TAAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEEECS-SEEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhhccc-cceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 3344433 3478899888775431 1111112223334456777788873 12 17788865554444322
Q ss_pred CCC---eeEE-EE---EEEEEeCC-------CeEEEEEcCCCcEE
Q 046394 85 HGE---VLKL-QF---LLASINKL-------GQLRYQNVTMGEIV 115 (378)
Q Consensus 85 ~~~---~~~l-~~---~l~s~~~d-------~~i~iwd~~~~~~~ 115 (378)
... ..++ .+ +++.|+.+ ..+.+||+.+.+-.
T Consensus 96 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 140 (318)
T 2woz_A 96 LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS 140 (318)
T ss_dssp BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE
T ss_pred CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEe
Confidence 221 1223 33 55556543 35788888776543
No 349
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=72.04 E-value=65 Score=30.09 Aligned_cols=162 Identities=15% Similarity=0.150 Sum_probs=92.0
Q ss_pred eeeeeecccceeeEEeec--------CCCCceEEEEcCCCC-EEEEEeCCCc----------------------------
Q 046394 26 IAREVDILSSRNQYDIML--------PELGPYTLDFTSSGR-YMAAAGCKGY---------------------------- 68 (378)
Q Consensus 26 ~i~~~d~~~~~~~~~l~~--------~~~~v~~~~~sp~g~-~l~~~~~dg~---------------------------- 68 (378)
.|.+|++. ++.++.+.. |...+....|.-||. -|++...+|+
T Consensus 156 ~l~aY~ld-G~~LW~idlg~Ni~aGahyt~~~V~DlDGDGkaEIvv~TadGt~dg~g~vigd~~~dyr~~~g~il~G~ey 234 (620)
T 2zuy_A 156 LIDAYKLD-GTFLWRINLGRNIRAGAHYTQFMVYDLDGDGKAEIAMKTADGTTDGKGHIIGDEQADFRNEQGRILSGPEY 234 (620)
T ss_dssp EEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSCTTCCCBCTTSCBCSSCCE
T ss_pred EEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCcceeecccccccccccceEecCCeE
Confidence 67788875 666666653 334566777777885 5677666665
Q ss_pred EEEEe-CCCCeEEeeccCC----------------C--eeEEEE-------EEEEEe--CCCeEEEEEcCCCcE--EEEE
Q 046394 69 PYFYN-RDGTELHCSKEHG----------------E--VLKLQF-------LLASIN--KLGQLRYQNVTMGEI--VGNF 118 (378)
Q Consensus 69 i~iwd-~~~~~~~~~~~~~----------------~--~~~l~~-------~l~s~~--~d~~i~iwd~~~~~~--~~~~ 118 (378)
+.|+| .+|..+.++.-.. . ..++++ ++++-+ .-..|..||...++. ...+
T Consensus 235 L~vfdG~TG~~l~t~~~~p~rg~~~~WGD~yGnR~drf~~~vayLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~~ 314 (620)
T 2zuy_A 235 LTVFKGETGEALTTVEYEPPRGKLEDWGDGYGNRMDRFLAGTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKKRWVF 314 (620)
T ss_dssp EEEEETTTCCEEEEEECSSCCCSGGGGTSSSSTTTTCEEEEEECTTCC-CEEEEEECSSSSCEEEEEEEETTEEEEEEEE
T ss_pred EEEEcCCCcceeeecccCCCcCccccccccccccccccceeEEecCCCCceEEEecCcccceeEEEEEccCCceeeeeEe
Confidence 58898 5788776643311 1 122333 222222 224577888877654 3333
Q ss_pred ecCC-----------CCeeEEEEcCCCC-EEEEEc----CCCe-----eeecCCCEEEEEEecC--CCEEEEEECC----
Q 046394 119 WTGL-----------GRTDVIRVNPFNG-VVSLGH----SGGT-----MLCHQGPVSALAFHPN--GHLMATSGKD---- 171 (378)
Q Consensus 119 ~~~~-----------~~v~~~~~s~~~~-~l~~~~----~d~~-----~~~h~~~v~~~~~sp~--g~~l~t~~~d---- 171 (378)
.... ..+....+.-||. .|+.++ .+|. -.+|...+..-.|.|+ |..++.+..+
T Consensus 315 ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~Gs~~iD~dG~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~E~~~~~ 394 (620)
T 2zuy_A 315 DSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYGAMAVDHDGTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHEDATKP 394 (620)
T ss_dssp ETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEETTEEECTTSSEEEECSCCCCSCEEEECSCTTSSSCEEEEECCCTTSS
T ss_pred cCCCCcccccccccCcCceEEecCCCCceeEEEeeeEECCCCCEEeecCCCCCceeEEEecCCCCCCCEEEEEecCCCCC
Confidence 3211 1222333333442 222221 2222 1268888888888886 5566666654
Q ss_pred CeEEEEEcCCceeeeee
Q 046394 172 CKIKIWDLRKYEVLQTL 188 (378)
Q Consensus 172 ~~i~iwd~~~~~~~~~~ 188 (378)
.-..++|.++|+.+...
T Consensus 395 ~G~~~~DA~tG~vlw~~ 411 (620)
T 2zuy_A 395 YGLSLRDAGTGEILWGV 411 (620)
T ss_dssp CSEEEEETTTCCEEEEE
T ss_pred CceEEEECCCCcEEEEe
Confidence 24678899999988776
No 350
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=67.65 E-value=60 Score=28.01 Aligned_cols=51 Identities=16% Similarity=0.059 Sum_probs=27.8
Q ss_pred cceeeeeecccceee--EEe----ecCCCCceEEEEcCC---CCEEEEE-e--CCCcEEEEeC
Q 046394 24 EAIAREVDILSSRNQ--YDI----MLPELGPYTLDFTSS---GRYMAAA-G--CKGYPYFYNR 74 (378)
Q Consensus 24 ~~~i~~~d~~~~~~~--~~l----~~~~~~v~~~~~sp~---g~~l~~~-~--~dg~i~iwd~ 74 (378)
.+.|.+++..++... ..+ .....+...|+|+|+ ..+|++. + .++.|.-|..
T Consensus 52 ~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~ 114 (347)
T 3das_A 52 EATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLY 114 (347)
T ss_dssp TCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEB
T ss_pred CCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEe
Confidence 566777765544332 111 122457889999995 3444443 2 3445666653
No 351
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=66.57 E-value=29 Score=24.01 Aligned_cols=16 Identities=6% Similarity=-0.060 Sum_probs=10.9
Q ss_pred eEEEEecCCCccccCC
Q 046394 193 KTLDFSRKDSGDFSGS 208 (378)
Q Consensus 193 ~~~~~sp~g~~~~~~~ 208 (378)
..+.+..+|...+.+.
T Consensus 53 ~~l~l~~dGNLVl~~~ 68 (110)
T 3a0c_A 53 CRLTLHNNGNLVIYDQ 68 (110)
T ss_dssp CEEEECTTSCEEEECT
T ss_pred EEEEEeCCCCEEEECC
Confidence 4567777887766654
No 352
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=66.21 E-value=97 Score=29.85 Aligned_cols=180 Identities=10% Similarity=0.019 Sum_probs=93.6
Q ss_pred ceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeecc------CCCe
Q 046394 15 VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKE------HGEV 88 (378)
Q Consensus 15 ~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~~~ 88 (378)
....+.....+ +..+|..+..-..........|.++.. .+| .|..|+.+ -|..+|.....+..+.. +..+
T Consensus 73 ~g~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i 148 (758)
T 3ott_A 73 NTYLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTI 148 (758)
T ss_dssp TTEEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCE
T ss_pred CCcEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeE
Confidence 33444444444 566777655322111111234666654 345 56666665 58889965544444411 1123
Q ss_pred eEEEE----EEEEEeCCCeEEEEEcCCCcEEEEEecC------CCCeeEEEEcCCCCEEEEEcCCCe--ee---------
Q 046394 89 LKLQF----LLASINKLGQLRYQNVTMGEIVGNFWTG------LGRTDVIRVNPFNGVVSLGHSGGT--ML--------- 147 (378)
Q Consensus 89 ~~l~~----~l~s~~~d~~i~iwd~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~d~~--~~--------- 147 (378)
.++.. .+..++.+ -|..+|..+++.. .+... ...|.++...+++..|.+|+..|. +.
T Consensus 149 ~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~Gl~~~~~~~~~~~~~ 226 (758)
T 3ott_A 149 YSIIRTKDNQIYVGTYN-GLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGYLFQYFPSTGQIKQT 226 (758)
T ss_dssp EEEEECTTCCEEEEETT-EEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEEEEEEETTTTEEEEE
T ss_pred EEEEEcCCCCEEEEeCC-CHhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEECCCCeEEcCCCCeEEec
Confidence 44444 33334444 4778887766543 22211 124788888887775555554443 10
Q ss_pred --ecCCCEEEEEEecCCCEEEEEECCCeEEEEEcCCceeeee---------e-cCCceEEEEecCCC
Q 046394 148 --CHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQT---------L-PGHAKTLDFSRKDS 202 (378)
Q Consensus 148 --~h~~~v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~~~~~~---------~-~~~i~~~~~sp~g~ 202 (378)
.....|.++...++|.+.+. +. +-|.++|..+...... + ...|.++....+|.
T Consensus 227 ~~l~~~~i~~i~~d~~g~lWig-T~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~ 291 (758)
T 3ott_A 227 EAFHNNSIKSLALDGNGDLLAG-TD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN 291 (758)
T ss_dssp EEEEEEEEEEEEECTTCCEEEE-ET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC
T ss_pred cCCCCCeEEEEEEcCCCCEEEE-eC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC
Confidence 01234677777777765544 44 4588888876543221 1 23466666666654
No 353
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=66.20 E-value=94 Score=29.74 Aligned_cols=90 Identities=13% Similarity=0.048 Sum_probs=46.1
Q ss_pred ceeeeeecccceeeEEe-e-----cCCC-CceEEEEcC-CCCEEEEEeCCC------cEEEEeCCCCeEEeeccCCC---
Q 046394 25 AIAREVDILSSRNQYDI-M-----LPEL-GPYTLDFTS-SGRYMAAAGCKG------YPYFYNRDGTELHCSKEHGE--- 87 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l-~-----~~~~-~v~~~~~sp-~g~~l~~~~~dg------~i~iwd~~~~~~~~~~~~~~--- 87 (378)
..+.+||..+......- . .... .-.+++..+ ++..++.||.++ .+.+||.....-..+.....
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~ 491 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRF 491 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCB
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcc
Confidence 34677888776543221 1 1111 112344433 677777776533 57888865544333322111
Q ss_pred e-eEEEE----EEEEEeCCC--eEEEEEcCCCcE
Q 046394 88 V-LKLQF----LLASINKLG--QLRYQNVTMGEI 114 (378)
Q Consensus 88 ~-~~l~~----~l~s~~~d~--~i~iwd~~~~~~ 114 (378)
. .++.+ +++.||.++ .+.+||+.+..-
T Consensus 492 ~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W 525 (695)
T 2zwa_A 492 RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF 525 (695)
T ss_dssp SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEE
T ss_pred cceEEEEcCCEEEEECCCCCCCCEEEEECCCCce
Confidence 1 22222 566666544 688888877553
No 354
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=61.85 E-value=39 Score=23.81 Aligned_cols=16 Identities=0% Similarity=-0.317 Sum_probs=10.8
Q ss_pred eEEEEecCCCccccCC
Q 046394 193 KTLDFSRKDSGDFSGS 208 (378)
Q Consensus 193 ~~~~~sp~g~~~~~~~ 208 (378)
..+.+..+|...+.+.
T Consensus 63 ~~l~l~~dGNLVl~d~ 78 (119)
T 1b2p_A 63 CRAVLQPDGVLVVITN 78 (119)
T ss_dssp CEEEECTTSCEEEECT
T ss_pred eEEEEccCCEEEEEeC
Confidence 4577777887766653
No 355
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=60.25 E-value=40 Score=23.44 Aligned_cols=47 Identities=11% Similarity=0.150 Sum_probs=23.4
Q ss_pred CCEEEEEECCCeEEEEEcCCceeeeee----cCCceEEEEecCCCccccCC
Q 046394 162 GHLMATSGKDCKIKIWDLRKYEVLQTL----PGHAKTLDFSRKDSGDFSGS 208 (378)
Q Consensus 162 g~~l~t~~~d~~i~iwd~~~~~~~~~~----~~~i~~~~~sp~g~~~~~~~ 208 (378)
|.+.+.-..||.+.+|+...+..+..- ......+.+..+|.+.+.+.
T Consensus 24 g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~ 74 (113)
T 3mez_B 24 RDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDD 74 (113)
T ss_dssp TTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECT
T ss_pred CCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECC
Confidence 344444445555555544222332222 12235677778887776654
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=58.18 E-value=15 Score=34.55 Aligned_cols=15 Identities=27% Similarity=0.481 Sum_probs=10.6
Q ss_pred EEEEEecCCCEEEEE
Q 046394 154 SALAFHPNGHLMATS 168 (378)
Q Consensus 154 ~~~~~sp~g~~l~t~ 168 (378)
-.|+|+|.|++++.-
T Consensus 479 DNL~fd~~G~LwI~e 493 (592)
T 3zwu_A 479 DGLGFDKAGRLWILT 493 (592)
T ss_dssp EEEEECTTCCEEEEE
T ss_pred cceEECCCCCEEEEe
Confidence 457889988855544
No 357
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=57.52 E-value=76 Score=26.97 Aligned_cols=49 Identities=8% Similarity=-0.058 Sum_probs=25.3
Q ss_pred ceeeeeecccceeeEEeecCCC-Cc-eEEEEcCCCCEEEEEeC------CCcEEEEeC
Q 046394 25 AIAREVDILSSRNQYDIMLPEL-GP-YTLDFTSSGRYMAAAGC------KGYPYFYNR 74 (378)
Q Consensus 25 ~~i~~~d~~~~~~~~~l~~~~~-~v-~~~~~sp~g~~l~~~~~------dg~i~iwd~ 74 (378)
..+.+||+.+.+-...-..... .- .+++.. ++..++.|+. ...+.+||.
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 4678888877654332222211 11 233333 4556666653 345777875
No 358
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=50.38 E-value=59 Score=22.35 Aligned_cols=16 Identities=6% Similarity=-0.076 Sum_probs=10.9
Q ss_pred eEEEEecCCCccccCC
Q 046394 193 KTLDFSRKDSGDFSGS 208 (378)
Q Consensus 193 ~~~~~sp~g~~~~~~~ 208 (378)
..+.+..+|.+.+.+.
T Consensus 52 ~~l~l~~dGNLvl~~~ 67 (109)
T 3dzw_A 52 CHLSMQSDGNLVVYSP 67 (109)
T ss_dssp CEEEECTTSCEEEECT
T ss_pred EEEEEeCCCCEEEECC
Confidence 4567777887766653
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=47.67 E-value=35 Score=34.19 Aligned_cols=36 Identities=6% Similarity=-0.090 Sum_probs=27.3
Q ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEe-CCCCeEEee
Q 046394 47 GPYTLDFTSSGRYMAAAGCKGYPYFYN-RDGTELHCS 82 (378)
Q Consensus 47 ~v~~~~~sp~g~~l~~~~~dg~i~iwd-~~~~~~~~~ 82 (378)
.+.+++..++..++++-+.|++++||+ .++.++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 356777777778888888999999998 566666553
No 360
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=45.85 E-value=71 Score=22.00 Aligned_cols=15 Identities=7% Similarity=-0.053 Sum_probs=9.5
Q ss_pred eEEEEecCCCccccC
Q 046394 193 KTLDFSRKDSGDFSG 207 (378)
Q Consensus 193 ~~~~~sp~g~~~~~~ 207 (378)
..+.+..+|...+.+
T Consensus 52 ~~l~l~~~GNLvl~d 66 (112)
T 1xd5_A 52 CVLKMQNDGNLVIYS 66 (112)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEEEeCCCCEEEEc
Confidence 456667777766655
No 361
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=42.58 E-value=43 Score=32.15 Aligned_cols=32 Identities=13% Similarity=0.118 Sum_probs=27.4
Q ss_pred eEEEE---EEEEEeCCCeEEEEEcCCCcEEEEEec
Q 046394 89 LKLQF---LLASINKLGQLRYQNVTMGEIVGNFWT 120 (378)
Q Consensus 89 ~~l~~---~l~s~~~d~~i~iwd~~~~~~~~~~~~ 120 (378)
.++.+ ++++-+.|.++++||+.+++++.+...
T Consensus 225 s~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 225 SCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 44455 889999999999999999999888765
No 362
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=41.08 E-value=69 Score=29.86 Aligned_cols=15 Identities=27% Similarity=0.445 Sum_probs=10.4
Q ss_pred CEEEEEEecCCCEEE
Q 046394 152 PVSALAFHPNGHLMA 166 (378)
Q Consensus 152 ~v~~~~~sp~g~~l~ 166 (378)
....|.|+++|.+.+
T Consensus 477 sPDnL~fd~~G~LWf 491 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWI 491 (592)
T ss_dssp CEEEEEECTTCCEEE
T ss_pred CCCceEECCCCCEEE
Confidence 456678888887655
No 363
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=39.61 E-value=1.6e+02 Score=24.26 Aligned_cols=188 Identities=15% Similarity=0.068 Sum_probs=93.8
Q ss_pred cCCceeeEEEeccceeeeeecccceeeEEeecCCCCceEEEEcCCCCEEEEEeCCCcEEEEeCC--CCeEEeeccCCCee
Q 046394 12 AEGVEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRD--GTELHCSKEHGEVL 89 (378)
Q Consensus 12 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~l~~~~~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~ 89 (378)
+.+...++.+. ++.+..|-....-.+-.-......|..++...+. .++. . ||.|+.|-.. ++.-.-......+.
T Consensus 30 a~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~ 105 (282)
T 3qhy_B 30 AGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVD 105 (282)
T ss_dssp EECSSEEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEE
T ss_pred EeCCCeEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeE
Confidence 34556677776 8888888765432211000112356666665432 3333 4 8999999832 22110001112334
Q ss_pred EEEE---EEEEEeCCCeEEEEEcCC-Cc---------EEEEEecCCCCeeEEEEcCCCCEEEEEcCCCe-e---eecCCC
Q 046394 90 KLQF---LLASINKLGQLRYQNVTM-GE---------IVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT-M---LCHQGP 152 (378)
Q Consensus 90 ~l~~---~l~s~~~d~~i~iwd~~~-~~---------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-~---~~h~~~ 152 (378)
.++. ..+.-. ||.|+.|-... ++ .+..+.. +.-..+++. ++..+.-|..... + ..-...
T Consensus 106 ~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~--G~~~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~ 181 (282)
T 3qhy_B 106 AIAAGAWASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDG--GVYTALAVK-NGGVIAWGDNYFGQTTVPAEAQSG 181 (282)
T ss_dssp EEEEETTEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEE--CSSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSS
T ss_pred EEECcCCEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEc--ccCEEEEEE-CCEEEEecCCCCCCCCCceecCCC
Confidence 4544 333344 89999997643 22 1222211 122334455 5665555554322 1 111245
Q ss_pred EEEEEEecCCCEEEEEECCCeEEEEEcCCc-ee---------eeee-cCCceEEEEecCCCccccCCCCC
Q 046394 153 VSALAFHPNGHLMATSGKDCKIKIWDLRKY-EV---------LQTL-PGHAKTLDFSRKDSGDFSGSHNY 211 (378)
Q Consensus 153 v~~~~~sp~g~~l~t~~~d~~i~iwd~~~~-~~---------~~~~-~~~i~~~~~sp~g~~~~~~~~~~ 211 (378)
|..|+..... .++. .||.|..|-.... ++ +..+ .+.-.++++. +|....|.....
T Consensus 182 v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~-~g~v~~wG~n~~ 247 (282)
T 3qhy_B 182 VDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK-NGKVIAWGSSRT 247 (282)
T ss_dssp EEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE-TTEEEEESTTCC
T ss_pred eEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE-CCEEEEecCCCC
Confidence 6777654332 3333 5999999976542 11 1111 2344556666 777777765543
No 364
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=36.36 E-value=2.9e+02 Score=26.32 Aligned_cols=88 Identities=10% Similarity=-0.059 Sum_probs=45.5
Q ss_pred eeeeeecccceeeEEeecCCC-CceEEEEcCCCCEEEEEeCCC--cEEEEeCCCCeEEeecc------CCCe-eEEEE--
Q 046394 26 IAREVDILSSRNQYDIMLPEL-GPYTLDFTSSGRYMAAAGCKG--YPYFYNRDGTELHCSKE------HGEV-LKLQF-- 93 (378)
Q Consensus 26 ~i~~~d~~~~~~~~~l~~~~~-~v~~~~~sp~g~~l~~~~~dg--~i~iwd~~~~~~~~~~~------~~~~-~~l~~-- 93 (378)
.+.+||+.+..-...-..... .-.+++...++..++.||.++ .+.+||.....-..+.. .... .++.+
T Consensus 469 dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~ 548 (695)
T 2zwa_A 469 DNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDP 548 (695)
T ss_dssp CCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEET
T ss_pred cEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeC
Confidence 467777776543222111111 112344434788888887754 68999966554443332 1111 22332
Q ss_pred ----EEEEEeC--C-----CeEEEEEcCCCc
Q 046394 94 ----LLASINK--L-----GQLRYQNVTMGE 113 (378)
Q Consensus 94 ----~l~s~~~--d-----~~i~iwd~~~~~ 113 (378)
+++.||. + ..+.+||+.+..
T Consensus 549 ~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 549 VSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 4455554 2 357778877665
No 365
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=35.88 E-value=3e+02 Score=26.34 Aligned_cols=152 Identities=11% Similarity=-0.022 Sum_probs=85.5
Q ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeecc--CCCeeEEEE---EEEEEeCCCeEEEEEcCCCcEEEEEe-
Q 046394 46 LGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKE--HGEVLKLQF---LLASINKLGQLRYQNVTMGEIVGNFW- 119 (378)
Q Consensus 46 ~~v~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~l~~---~l~s~~~d~~i~iwd~~~~~~~~~~~- 119 (378)
..|.++....+| .|.+|+.+| +..||........... ...+.++.. .+..++.+ -|..+|..+++.. .+.
T Consensus 63 ~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~-~~~~ 138 (758)
T 3ott_A 63 TRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLT-SFDT 138 (758)
T ss_dssp SCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEE-EECH
T ss_pred ceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEE-Eecc
Confidence 457888777766 566666665 8899954433322111 112333333 34444444 5788898766543 231
Q ss_pred ----cCCCCeeEEEEcCCCCEEEEEcCCCe---------eee--c-------CCCEEEEEEecCCCEEEEEECCCeEEEE
Q 046394 120 ----TGLGRTDVIRVNPFNGVVSLGHSGGT---------MLC--H-------QGPVSALAFHPNGHLMATSGKDCKIKIW 177 (378)
Q Consensus 120 ----~~~~~v~~~~~s~~~~~l~~~~~d~~---------~~~--h-------~~~v~~~~~sp~g~~l~t~~~d~~i~iw 177 (378)
.....|.++....++.+.+.. ..|. +.. . ...|.++...+++..|..++. +-|..+
T Consensus 139 ~~~~l~~~~i~~i~~d~~g~lWigt-~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~ 216 (758)
T 3ott_A 139 RRNGLPNNTIYSIIRTKDNQIYVGT-YNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQY 216 (758)
T ss_dssp HHHCCSCSCEEEEEECTTCCEEEEE-TTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEE
T ss_pred CCCCcCCCeEEEEEEcCCCCEEEEe-CCCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEE
Confidence 123567888888887765533 3443 110 0 123788888877765444543 458889
Q ss_pred EcCCceeee--ee-cCCceEEEEecCCCc
Q 046394 178 DLRKYEVLQ--TL-PGHAKTLDFSRKDSG 203 (378)
Q Consensus 178 d~~~~~~~~--~~-~~~i~~~~~sp~g~~ 203 (378)
|..+++... .+ ...|.++...++|.+
T Consensus 217 ~~~~~~~~~~~~l~~~~i~~i~~d~~g~l 245 (758)
T 3ott_A 217 FPSTGQIKQTEAFHNNSIKSLALDGNGDL 245 (758)
T ss_dssp ETTTTEEEEEEEEEEEEEEEEEECTTCCE
T ss_pred cCCCCeEEeccCCCCCeEEEEEEcCCCCE
Confidence 987765422 22 345667766666654
No 366
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=35.21 E-value=2.3e+02 Score=24.77 Aligned_cols=64 Identities=11% Similarity=0.067 Sum_probs=36.4
Q ss_pred eEEEEEcCCC--cEEEEEecCCCCeeEEEEcCCCCEEEEEcCCCeeeecCCCEEEEEEe---cC----CCEEE-EEECCC
Q 046394 103 QLRYQNVTMG--EIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFH---PN----GHLMA-TSGKDC 172 (378)
Q Consensus 103 ~i~iwd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~~~~h~~~v~~~~~s---p~----g~~l~-t~~~d~ 172 (378)
.|.+||+.+. +.++.+......+ .....+..+++. |. +.++. +=+..+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~----------------------~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~ 181 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLV----------------------EKPTYFGGFAVDVANPKGDCSETFVYITNFLRG 181 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGC----------------------CCGGGEEEEEEEESCTTTTSCSEEEEEEETTTT
T ss_pred eEEEEECCCCCceeEEEEECCHHhc----------------------ccCCccceEEEecccCCCCCCccEEEEEcCCCC
Confidence 4677788777 7777665322111 112345666666 22 22333 333467
Q ss_pred eEEEEEcCCceeeeee
Q 046394 173 KIKIWDLRKYEVLQTL 188 (378)
Q Consensus 173 ~i~iwd~~~~~~~~~~ 188 (378)
.|.|+|+.+++..+.+
T Consensus 182 gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 182 ALFIYDHKKQDSWNVT 197 (381)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred cEEEEECCCCcEEEEc
Confidence 8999999887765544
No 367
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=34.82 E-value=1.1e+02 Score=20.86 Aligned_cols=17 Identities=6% Similarity=-0.187 Sum_probs=11.6
Q ss_pred eEEEEecCCCccccCCC
Q 046394 193 KTLDFSRKDSGDFSGSH 209 (378)
Q Consensus 193 ~~~~~sp~g~~~~~~~~ 209 (378)
..+.+..||...+.+..
T Consensus 53 ~~L~l~~dGnLvL~d~~ 69 (105)
T 4h3o_A 53 CSAVLQSDGNFVVYDSS 69 (105)
T ss_dssp CEEEECTTSCEEEECTT
T ss_pred EEEEEeCCccEEEECCC
Confidence 45778888877666543
No 368
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=34.61 E-value=2.2e+02 Score=24.49 Aligned_cols=68 Identities=7% Similarity=-0.126 Sum_probs=29.9
Q ss_pred CCCCCeeecCCce---eeEEEeccceeeeeeccc-ceeeEEe--ecCCCCceEEEEcC--CCCEEEEEeCCC----cEEE
Q 046394 4 PSEGGYLEAEGVE---KTWRIKQEAIAREVDILS-SRNQYDI--MLPELGPYTLDFTS--SGRYMAAAGCKG----YPYF 71 (378)
Q Consensus 4 ~~~~~~l~~~~~~---~~~~~~~~~~i~~~d~~~-~~~~~~l--~~~~~~v~~~~~sp--~g~~l~~~~~dg----~i~i 71 (378)
|...+.|.+..++ ..+.....+. .+++... +.....+ ......|.+|++.| .+.. .+++..| .|..
T Consensus 8 ~~~~~~~~~~~~d~~g~l~vgt~~Gl-~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l-~~g~~~g~~g~gl~~ 85 (394)
T 3b7f_A 8 PQTEPHKTSAPESGPVMLLVATIKGA-WFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERM-LMAARTGHLGPTVFR 85 (394)
T ss_dssp --------CCCCCSCCEEEEEETTEE-EEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCE-EEEEEC--CCEEEEE
T ss_pred ccccccccccCCCCCCEEEEEecCce-EEEECCCCCCCceECCccCCCCceEEEEECCCCCCeE-EEEecCCCCCccEEE
Confidence 4556667666544 5665565563 3343322 2221111 12335689999998 4444 4444444 4555
Q ss_pred Ee
Q 046394 72 YN 73 (378)
Q Consensus 72 wd 73 (378)
.+
T Consensus 86 s~ 87 (394)
T 3b7f_A 86 SD 87 (394)
T ss_dssp ES
T ss_pred eC
Confidence 44
No 369
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=31.87 E-value=1.3e+02 Score=20.99 Aligned_cols=10 Identities=20% Similarity=0.026 Sum_probs=6.3
Q ss_pred eCCCeEEEEE
Q 046394 99 NKLGQLRYQN 108 (378)
Q Consensus 99 ~~d~~i~iwd 108 (378)
..||.+.++|
T Consensus 68 ~~dGNLVl~d 77 (119)
T 1b2p_A 68 QPDGVLVVIT 77 (119)
T ss_dssp CTTSCEEEEC
T ss_pred ccCCEEEEEe
Confidence 4566666666
No 370
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=31.62 E-value=1.3e+02 Score=20.79 Aligned_cols=16 Identities=6% Similarity=-0.124 Sum_probs=11.1
Q ss_pred eEEEEecCCCccccCC
Q 046394 193 KTLDFSRKDSGDFSGS 208 (378)
Q Consensus 193 ~~~~~sp~g~~~~~~~ 208 (378)
..+.+..+|...+.+.
T Consensus 53 ~~l~l~~~GnLvl~d~ 68 (115)
T 2dpf_A 53 CRLTLLSDGNLVIYDH 68 (115)
T ss_dssp CEEEECTTSCEEEECT
T ss_pred eEEEECCCCcEEEECC
Confidence 4677788887766653
No 371
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=30.30 E-value=1e+02 Score=28.95 Aligned_cols=49 Identities=16% Similarity=0.114 Sum_probs=30.9
Q ss_pred ceEEEEecCCCcccc----------------------CCCCCceEEEeeccCCcceeeeEEcCCCCeEEEe
Q 046394 192 AKTLDFSRKDSGDFS----------------------GSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIG 240 (378)
Q Consensus 192 i~~~~~sp~g~~~~~----------------------~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~ 240 (378)
.-.|+|+|.|...+. +...+.+.....++.+..++.++|+||++.|.+.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 466889998874221 1223344444444456789999999999876543
No 372
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=30.06 E-value=43 Score=34.38 Aligned_cols=24 Identities=8% Similarity=-0.035 Sum_probs=11.9
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEe
Q 046394 50 TLDFTSSGRYMAAAGCKGYPYFYN 73 (378)
Q Consensus 50 ~~~~sp~g~~l~~~~~dg~i~iwd 73 (378)
+++..++..++++-+.|++++||+
T Consensus 242 s~~~~~~~~~lftL~~D~~LRiWs 265 (1139)
T 4fhn_B 242 SMIFLSTYNVLVMLSLDYKLKVLD 265 (1139)
T ss_dssp CCEEETTTTEEEEEBTTCEEEEEE
T ss_pred EeeccCCccEEEEEeCCCEEEEEE
Confidence 333344444555555555555555
No 373
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=28.49 E-value=1.4e+02 Score=20.42 Aligned_cols=48 Identities=13% Similarity=0.089 Sum_probs=22.2
Q ss_pred eEEEEecCCCccccCCCCCceEEEee--ccCCcceeeeEEcCCCCeEEEe
Q 046394 193 KTLDFSRKDSGDFSGSHNYNRYMGYS--MVKGYQIGKVSFRPYEDVLGIG 240 (378)
Q Consensus 193 ~~~~~sp~g~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~sp~g~~l~~~ 240 (378)
..+.+..+|.+.+.+.....++-.-. .........+.+.+||.+.+.+
T Consensus 52 ~~l~l~~dGNLVl~~~~~~~~vW~S~t~~~~~~~~~~l~Lq~dGNlvly~ 101 (111)
T 3mez_A 52 CTLRLNNRGQLEIHSANSNTPVWVYPRSVNTVRGNYAATLGPDQHVTIYG 101 (111)
T ss_dssp CEEEECTTSCEEEECSSCSSCSEEESSSCCCCSSCCEEEECTTSCEEEEC
T ss_pred EEEEEcCCCcEEEEeCCCCEEEEEeccccCCCCcCEEEEECCCCeEEEec
Confidence 45677777777666543222111110 0011123445666666655543
No 374
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=23.99 E-value=2.1e+02 Score=26.68 Aligned_cols=39 Identities=8% Similarity=-0.044 Sum_probs=27.0
Q ss_pred eeeeeecccceeeEEeecCC-CCceEEEEcCCCCEEEEEe
Q 046394 26 IAREVDILSSRNQYDIMLPE-LGPYTLDFTSSGRYMAAAG 64 (378)
Q Consensus 26 ~i~~~d~~~~~~~~~l~~~~-~~v~~~~~sp~g~~l~~~~ 64 (378)
.+..++..+++....+.... ..++.++||||++.|+++-
T Consensus 510 ~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 510 QMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred eEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45556666676655555432 4588999999999887763
Done!