BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046395
(535 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1EQP|A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans
Length = 394
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 165/330 (50%), Gaps = 50/330 (15%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV 216
EY T G + A+++++ HW ++ITE+DFK +S GLN VRIP+G+W A+ P+V
Sbjct: 45 EYHWTQTLGKEAASRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 103
Query: 217 GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIID 276
G +Q L+ A WA+K ++V +DLH SQNG +SG RD + + + Q T+ +++
Sbjct: 104 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 163
Query: 277 FLASRYADHP---SLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-- 331
+ +Y + ++ IEL+NEP P L +D LK ++ GY+++R+ S VI+ +
Sbjct: 164 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 223
Query: 332 RLGGEWSELLSFASNLSRVVIDVHFYNLFWD-----NFN-KMSVQQNIDYIYRQRSS--- 382
++ G W+ L+ A VV+D H Y +F N N +SV N + ++ S
Sbjct: 224 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNV 283
Query: 383 ----------------------------DLRNVTTSDGPLSFVGEWSCEWEAEGASKRDY 414
D S PL + +WS E K D
Sbjct: 284 AGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDE------HKTDT 337
Query: 415 QRFAEAQLDVYGRATFGWAYWAYKFAESPQ 444
+R+ EAQLD + T GW +W++K +P+
Sbjct: 338 RRYIEAQLDAF-EYTGGWVFWSWKTENAPE 366
>pdb|2PC8|A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida
Albicans In Complex With Two Separately Bound
Glucopyranoside Units At 1.8 A
Length = 400
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 166/330 (50%), Gaps = 50/330 (15%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV 216
EY T G + A ++++ HW ++ITE+DFK +S GLN VRIP+G+W A+ P+V
Sbjct: 51 EYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 109
Query: 217 GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIID 276
G +Q L+ A WA+K ++V +DLH SQNG +SG RD + + + Q T+ +++
Sbjct: 110 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 169
Query: 277 FLASRYADHP---SLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-- 331
+ +Y + ++ IEL+NEP P L +D LK ++ GY+++R+ S VI+ +
Sbjct: 170 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 229
Query: 332 RLGGEWSELLSFASNLSRVVIDVHFYNLFWD-----NFN-KMSVQQNIDY---------I 376
++ G W+ L+ A VV+D H Y +F N N +SV N + +
Sbjct: 230 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNV 289
Query: 377 YRQRSSDLRNVTT----------------------SDGPLSFVGEWSCEWEAEGASKRDY 414
Q S+ L + S PL + +WS E K D
Sbjct: 290 AGQWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDE------HKTDT 343
Query: 415 QRFAEAQLDVYGRATFGWAYWAYKFAESPQ 444
+R+ EAQLD + T GW +W++K +P+
Sbjct: 344 RRYIEAQLDAF-EYTGGWVFWSWKTENAPE 372
>pdb|3N9K|A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From
Candida Albicans In Complex With Laminaritriose At 1.7 A
Length = 399
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 167/328 (50%), Gaps = 46/328 (14%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV 216
EY T G + A ++++ HW ++ITE+DFK +S GLN VRIP+G+W A+ P+V
Sbjct: 50 EYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 108
Query: 217 GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIID 276
G +Q L+ A WA+K ++V +DLH SQNG +SG RD + + + Q T+ +++
Sbjct: 109 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 168
Query: 277 FLASRYADHP---SLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-- 331
+ +Y + ++ IEL+NEP P L +D LK ++ GY+++R+ S VI+ +
Sbjct: 169 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAA 228
Query: 332 RLGGEWSELLSFASNLSRVVIDVHFYNLFWD-----NFN-KMSVQQNIDYIYRQRSSDLR 385
++ G W+ L+ A VV+D H Y +F N N +SV N + ++ S
Sbjct: 229 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESH--W 286
Query: 386 NVTTS-DGPLSFVGEW---------------------SC-------EWEAEGASKRDYQR 416
NV S L+ +W SC +W E K D +R
Sbjct: 287 NVAGSWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDE--HKTDTRR 344
Query: 417 FAEAQLDVYGRATFGWAYWAYKFAESPQ 444
+ EAQLD + T GW +W++K +P+
Sbjct: 345 YIEAQLDAF-EYTGGWVFWSWKTENAPE 371
>pdb|2PB1|A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex
With Unhydrolysed And Covalently Linked
2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside
At 1.9 A
Length = 400
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 164/330 (49%), Gaps = 50/330 (15%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV 216
EY T G + A ++++ HW ++ITE+DFK +S GLN VRIP+G+W A+ P+V
Sbjct: 51 EYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 109
Query: 217 GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIID 276
G +Q L+ A WA+K ++V +DLH SQNG +SG RD + + + Q T+ +++
Sbjct: 110 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 169
Query: 277 FLASRYADHP---SLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-- 331
+ +Y + ++ IEL+NEP P L +D LK ++ GY+++R+ S VI+ +
Sbjct: 170 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 229
Query: 332 RLGGEWSELLSFASNLSRVVIDVHFYNLFWD-----NFN-KMSVQQNIDYIYRQRSS--- 382
++ G W+ L+ A VV+D H Y +F N N +SV N + ++ S
Sbjct: 230 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNV 289
Query: 383 ----------------------------DLRNVTTSDGPLSFVGEWSCEWEAEGASKRDY 414
D S PL + +WS E K D
Sbjct: 290 AGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDE------HKTDT 343
Query: 415 QRFAEAQLDVYGRATFGWAYWAYKFAESPQ 444
+R+ EAQLD + T GW +W++K +P+
Sbjct: 344 RRYIEAQLDAF-EYTGGWVFWSWKTENAPE 372
>pdb|1CZ1|A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A
Resolution
pdb|1EQC|A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans In Complex
With Castanospermine At 1.85 A
Length = 394
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 164/330 (49%), Gaps = 50/330 (15%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV 216
EY T G + A ++++ HW ++ITE+DFK +S GLN VRIP+G+W A+ P+V
Sbjct: 45 EYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 103
Query: 217 GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIID 276
G +Q L+ A WA+K ++V +DLH SQNG +SG RD + + + Q T+ +++
Sbjct: 104 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 163
Query: 277 FLASRYADHP---SLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-- 331
+ +Y + ++ IEL+NEP P L +D LK ++ GY+++R+ S VI+ +
Sbjct: 164 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 223
Query: 332 RLGGEWSELLSFASNLSRVVIDVHFYNLFWD-----NFN-KMSVQQNIDYIYRQRSS--- 382
++ G W+ L+ A VV+D H Y +F N N +SV N + ++ S
Sbjct: 224 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNV 283
Query: 383 ----------------------------DLRNVTTSDGPLSFVGEWSCEWEAEGASKRDY 414
D S PL + +WS E K D
Sbjct: 284 AGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDE------HKTDT 337
Query: 415 QRFAEAQLDVYGRATFGWAYWAYKFAESPQ 444
+R+ EAQLD + T GW +W++K +P+
Sbjct: 338 RRYIEAQLDAF-EYTGGWVFWSWKTENAPE 366
>pdb|2PBO|A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans
At 1.85 A
Length = 400
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 164/330 (49%), Gaps = 50/330 (15%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV 216
EY T G + A ++++ HW ++ITE+DFK +S GLN VRIP+G+W A+ P+V
Sbjct: 51 EYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 109
Query: 217 GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIID 276
G +Q L+ A WA+K ++V +DLH SQNG +SG RD + + + Q T+ +++
Sbjct: 110 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 169
Query: 277 FLASRYADHP---SLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-- 331
+ +Y + ++ IEL+NEP P L +D LK ++ GY+++R+ S VI+ +
Sbjct: 170 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 229
Query: 332 RLGGEWSELLSFASNLSRVVIDVHFYNLFWD-----NFN-KMSVQQNIDYIYRQRSS--- 382
++ G W+ L+ A VV+D H Y +F N N +SV N + ++ S
Sbjct: 230 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNV 289
Query: 383 ----------------------------DLRNVTTSDGPLSFVGEWSCEWEAEGASKRDY 414
D S PL + +WS E K D
Sbjct: 290 AGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDE------HKTDT 343
Query: 415 QRFAEAQLDVYGRATFGWAYWAYKFAESPQ 444
+R+ EAQLD + T GW +W++K +P+
Sbjct: 344 RRYIEAQLDAF-EYTGGWVFWSWKTENAPE 372
>pdb|3O6A|A Chain A, F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From
Candida Albicans At 2 A
Length = 399
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 164/330 (49%), Gaps = 50/330 (15%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV 216
EY T G + A ++++ HW ++ITE+DFK +S GLN VRIP+G+W A+ P+V
Sbjct: 50 EYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 108
Query: 217 GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIID 276
G +Q L+ A WA+K ++V +DLH SQNG +SG RD + + + Q T+ +++
Sbjct: 109 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGYDNSGLRDSYNFQNGDNTQVTLNVLN 168
Query: 277 FLASRYADHP---SLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-- 331
+ +Y + ++ IEL+NEP P L +D LK ++ GY+++R+ S VI+ +
Sbjct: 169 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 228
Query: 332 RLGGEWSELLSFASNLSRVVIDVHFYNLFWD-----NFN-KMSVQQNIDYIYRQRSS--- 382
++ G W+ L+ A VV+D H Y ++ N N +SV N + ++ S
Sbjct: 229 QVFGYWNNFLTVAEGQWNVVVDHHHYQVYSGGELSRNINDHISVACNWGWDAKKESHWNV 288
Query: 383 ----------------------------DLRNVTTSDGPLSFVGEWSCEWEAEGASKRDY 414
D S PL + +WS E K D
Sbjct: 289 AGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDE------HKTDT 342
Query: 415 QRFAEAQLDVYGRATFGWAYWAYKFAESPQ 444
+R+ EAQLD + T GW +W++K +P+
Sbjct: 343 RRYIEAQLDAF-EYTGGWVFWSWKTENAPE 371
>pdb|2PF0|A Chain A, F258i Mutant Of Exo-B-(1,3)-Glucanase From Candida
Albicans At 1.9 A
Length = 400
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 163/330 (49%), Gaps = 50/330 (15%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV 216
EY T G + A ++++ HW ++ITE+DFK +S GLN VRIP+G+W A+ P+V
Sbjct: 51 EYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 109
Query: 217 GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIID 276
G +Q L+ A WA+K ++V +DLH SQNG +SG RD + + + Q T+ +++
Sbjct: 110 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 169
Query: 277 FLASRYADHP---SLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-- 331
+ +Y + ++ IEL+NEP P L +D LK ++ GY+++R+ S VI+ +
Sbjct: 170 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 229
Query: 332 RLGGEWSELLSFASNLSRVVIDVHFYNLFWD-----NFN-KMSVQQNIDYIYRQRSS--- 382
++ G W+ L+ A VV+D H Y + N N +SV N + ++ S
Sbjct: 230 QVFGYWNNFLTVAEGQWNVVVDHHHYQVISGGELSRNINDHISVACNWGWDAKKESHWNV 289
Query: 383 ----------------------------DLRNVTTSDGPLSFVGEWSCEWEAEGASKRDY 414
D S PL + +WS E K D
Sbjct: 290 AGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDE------HKTDT 343
Query: 415 QRFAEAQLDVYGRATFGWAYWAYKFAESPQ 444
+R+ EAQLD + T GW +W++K +P+
Sbjct: 344 RRYIEAQLDAF-EYTGGWVFWSWKTENAPE 372
>pdb|1H4P|A Chain A, Crystal Structure Of Exo-1,3-Beta Glucanse From
Saccharomyces Cerevisiae
pdb|1H4P|B Chain B, Crystal Structure Of Exo-1,3-Beta Glucanse From
Saccharomyces Cerevisiae
Length = 408
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 149/329 (45%), Gaps = 53/329 (16%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV 216
EY G D A ++ HW ++ E+DF ++ G N VRIP+G+W A+ P+V
Sbjct: 50 EYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYW-AFQILDDDPYV 108
Query: 217 GGSLQA-LDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAII 275
G ++ LD A WA+ +KV VDLH SQNG +SG RD ++ DS++ T+ ++
Sbjct: 109 SGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTINVL 168
Query: 276 DFLASRYADHPSL---VAIELMNEPKAPDLKLDSLKTYYKA-GYDTVRKYSSSAYVILSN 331
+++ +Y+ L + IEL+NEP P L +D +K Y A Y+ +R S VI+ +
Sbjct: 169 NYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIH 228
Query: 332 ---RLGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDY------------- 375
+ W + ++ V ID H Y +F + + S+ ++I
Sbjct: 229 DAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTGVLNESH 288
Query: 376 --IYRQRSSDLRNV-----------------TTSDGPLSFVGEWSCE-------WEAEGA 409
+ + ++ L + D S++G SC W E
Sbjct: 289 WIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIG--SCANNDDIAYWSDE-- 344
Query: 410 SKRDYQRFAEAQLDVYGRATFGWAYWAYK 438
K + +R+ EAQLD + GW W YK
Sbjct: 345 RKENTRRYVEAQLDAF-EMRGGWIIWCYK 372
>pdb|1CEC|A Chain A, A Common Protein Fold And Similar Active Site In Two
Distinct Families Of Beta-Glycanases
Length = 343
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 33/202 (16%)
Query: 174 RDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKY 233
++H+ ++ITE+D + +++ G + VR+P + I + L +D W +KY
Sbjct: 22 KEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKY 81
Query: 234 GMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQET-------VAIIDFLASRYADHP 286
+ +++D+H +P G R FQ++ S + E V I FLA RY +
Sbjct: 82 NLGLVLDMHH-------AP--GYR--FQDFKTSTLFEDPNQQKRFVDIWRFLAKRYINER 130
Query: 287 SLVAIELMNEPKAPD------LKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSEL 340
+A EL+NE PD L L+ +K +R+ S+ ++ + EL
Sbjct: 131 EHIAFELLNEVVEPDSTRWNKLMLECIK--------AIREIDSTMWLYIGGNNYNSPDEL 182
Query: 341 LSFAS-NLSRVVIDVHFYNLFW 361
+ A + +V + HFYN F+
Sbjct: 183 KNLADIDDDYIVYNFHFYNPFF 204
>pdb|1CEN|A Chain A, Cellulase (Celc) Mutant With Glu 140 Replaced By Gln
Complexed With Cellohexaose
pdb|1CEO|A Chain A, Cellulase (Celc) Mutant With Glu 140 Replaced By Gln
Length = 343
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 33/202 (16%)
Query: 174 RDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKY 233
++H+ ++ITE+D + +++ G + VR+P + I + L +D W +KY
Sbjct: 22 KEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKY 81
Query: 234 GMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQET-------VAIIDFLASRYADHP 286
+ +++D+H +P G R FQ++ S + E V I FLA RY +
Sbjct: 82 NLGLVLDMHH-------AP--GYR--FQDFKTSTLFEDPNQQKRFVDIWRFLAKRYINER 130
Query: 287 SLVAIELMNEPKAPD------LKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSEL 340
+A EL+N+ PD L L+ +K +R+ S+ ++ + EL
Sbjct: 131 EHIAFELLNQVVEPDSTRWNKLMLECIK--------AIREIDSTMWLYIGGNNYNSPDEL 182
Query: 341 LSFAS-NLSRVVIDVHFYNLFW 361
+ A + +V + HFYN F+
Sbjct: 183 KNLADIDDDYIVYNFHFYNPFF 204
>pdb|3MMU|A Chain A, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMU|B Chain B, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMU|C Chain C, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMU|D Chain D, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMU|E Chain E, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMU|F Chain F, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMU|G Chain G, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMU|H Chain H, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMW|A Chain A, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMW|B Chain B, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMW|C Chain C, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMW|D Chain D, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3AMC|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
And DimerAU
pdb|3AMC|B Chain B, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
And DimerAU
pdb|3AMD|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
And TetramerAU
pdb|3AMD|B Chain B, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
And TetramerAU
pdb|3AMD|C Chain C, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
And TetramerAU
pdb|3AMD|D Chain D, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
And TetramerAU
Length = 317
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 72/186 (38%), Gaps = 16/186 (8%)
Query: 177 WKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK 236
W I +E F + + G + VRIP+ W PP + + +D A K G+
Sbjct: 30 WGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLA 89
Query: 237 VIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNE 296
V++++H N R +A+ +A RY D+P + E++NE
Sbjct: 90 VVINIHHYEELMNDPEEHKER-------------FLALWKQIADRYKDYPETLFFEILNE 136
Query: 297 PKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSEL--LSFASNLSRVVIDV 354
P +L + + +R +I+ G S L LS ++ +
Sbjct: 137 PHG-NLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTI 195
Query: 355 HFYNLF 360
H+YN F
Sbjct: 196 HYYNPF 201
>pdb|3AZR|A Chain A, Diverse Substrates Recognition Mechanism Revealed By
Thermotoga Maritima Cel5a Structures In Complex With
Cellobiose
pdb|3AZR|B Chain B, Diverse Substrates Recognition Mechanism Revealed By
Thermotoga Maritima Cel5a Structures In Complex With
Cellobiose
pdb|3AZS|A Chain A, Diverse Substrates Recognition Mechanism Revealed By
Thermotoga Maritima Cel5a Structures In Complex With
Mannotriose
pdb|3AZS|B Chain B, Diverse Substrates Recognition Mechanism Revealed By
Thermotoga Maritima Cel5a Structures In Complex With
Mannotriose
pdb|3AZT|A Chain A, Diverse Substrates Recognition Mechanism Revealed By
Thermotoga Maritima Cel5a Structures In Complex With
Cellotetraose
pdb|3AZT|B Chain B, Diverse Substrates Recognition Mechanism Revealed By
Thermotoga Maritima Cel5a Structures In Complex With
Cellotetraose
pdb|3AZT|C Chain C, Diverse Substrates Recognition Mechanism Revealed By
Thermotoga Maritima Cel5a Structures In Complex With
Cellotetraose
pdb|3AZT|D Chain D, Diverse Substrates Recognition Mechanism Revealed By
Thermotoga Maritima Cel5a Structures In Complex With
Cellotetraose
Length = 317
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 72/186 (38%), Gaps = 16/186 (8%)
Query: 177 WKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK 236
W I +E F + + G + VRIP+ W PP + + +D A K G+
Sbjct: 30 WGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLA 89
Query: 237 VIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNE 296
V++++H N R +A+ +A RY D+P + E++NE
Sbjct: 90 VVINIHHYEELMNDPEEHKER-------------FLALWKQIADRYKDYPETLFFEILNE 136
Query: 297 PKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSEL--LSFASNLSRVVIDV 354
P +L + + +R +I+ G S L LS ++ +
Sbjct: 137 PHG-NLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTI 195
Query: 355 HFYNLF 360
H+YN F
Sbjct: 196 HYYNPF 201
>pdb|3AMG|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex
With Cellobiose Substrate, Mutant Form
pdb|3AMG|B Chain B, Crystal Structures Of Thermotoga Maritima Cel5a In Complex
With Cellobiose Substrate, Mutant Form
Length = 317
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 71/186 (38%), Gaps = 16/186 (8%)
Query: 177 WKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK 236
W I +E F + + G + VRIP+ W PP + + +D A K G+
Sbjct: 30 WGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLA 89
Query: 237 VIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNE 296
V++++H N R +A+ +A RY D+P + E++N
Sbjct: 90 VVINIHHYEELMNDPEEHKER-------------FLALWKQIADRYKDYPETLFFEILNA 136
Query: 297 PKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSEL--LSFASNLSRVVIDV 354
P +L + + +R +I+ G S L LS ++ +
Sbjct: 137 PHG-NLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTI 195
Query: 355 HFYNLF 360
H+YN F
Sbjct: 196 HYYNPF 201
>pdb|3AOF|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex
With Mannotriose Substrate
pdb|3AOF|B Chain B, Crystal Structures Of Thermotoga Maritima Cel5a In Complex
With Mannotriose Substrate
Length = 317
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 71/186 (38%), Gaps = 16/186 (8%)
Query: 177 WKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK 236
W I +E F + + G + VRIP+ W PP + + +D A K G+
Sbjct: 30 WGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLA 89
Query: 237 VIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNE 296
V++++H N R +A+ +A RY D+P + E++N
Sbjct: 90 VVINIHHYEELMNDPEEHKER-------------FLALWKQIADRYKDYPETLFFEILNA 136
Query: 297 PKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSEL--LSFASNLSRVVIDV 354
P +L + + +R +I+ G S L LS ++ +
Sbjct: 137 PHG-NLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTI 195
Query: 355 HFYNLF 360
H+YN F
Sbjct: 196 HYYNPF 201
>pdb|1VJZ|A Chain A, Crystal Structure Of Endoglucanase (Tm1752) From
Thermotoga Maritima At 2.05 A Resolution
Length = 341
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLH 242
EEDF + +Q N VRIP + D P + +D W +KYG+ + + LH
Sbjct: 39 EEDFLWXAQWDFNFVRIPXCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLH 98
Query: 243 ALRVSQNGSPHSGSRDGFQEWSDSDIQET-VAIIDFLASRYADHPSL-VAIELMNEPKAP 300
+ S + + W D QE + F+A RY S ++ L+NEP P
Sbjct: 99 R---APGYSVNKEVEEKTNLWKDETAQEAFIHHWSFIARRYKGISSTHLSFNLINEPPFP 155
Query: 301 DLKLDSLKTY---YKAGYDTVRKYSSSAYVIL 329
D ++ S++ + K +RK +I+
Sbjct: 156 DPQIXSVEDHNSLIKRTITEIRKIDPERLIII 187
>pdb|3RJY|A Chain A, Crystal Structure Of Hyperthermophilic
Endo-Beta-1,4-Glucanase In Complex With Substrate
Length = 320
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 85/227 (37%), Gaps = 28/227 (12%)
Query: 142 DPSVFNMTIVSTMHGEYQITNGYGPDKAAKL---MRDHWKSYITEEDFKFMSQNGLNAVR 198
D SV N+ +S EY G+G + L + W YI +E FK + + G ++VR
Sbjct: 2 DQSVSNVDKMSAF--EYNKMIGHGINMGNALEAPVEGSWGVYIEDEYFKIIKERGFDSVR 59
Query: 199 IPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD 258
IP+ W K P L + + A K + VI++ H G
Sbjct: 60 IPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEELYQAPDKYGPV- 118
Query: 259 GFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTV 318
V I +A + D+P + E+ NEP A +L Y +
Sbjct: 119 ------------LVEIWKQVAQAFKDYPDKLFFEIFNEP-AQNLTPTKWNELYPKVLGEI 165
Query: 319 RKYSSSAYVILSNRLGGEWSELLSFASNLSRV-----VIDVHFYNLF 360
RK + S VI+ WS S+ L V ++ H+Y F
Sbjct: 166 RKTNPSRIVIID---VPNWSN-YSYVRELKLVDDKNIIVSFHYYEPF 208
>pdb|3NCO|A Chain A, Crystal Structure Of Fncel5a From F. Nodosum Rt17-B1
pdb|3NCO|B Chain B, Crystal Structure Of Fncel5a From F. Nodosum Rt17-B1
Length = 320
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 84/227 (37%), Gaps = 28/227 (12%)
Query: 142 DPSVFNMTIVSTMHGEYQITNGYGPDKAAKL---MRDHWKSYITEEDFKFMSQNGLNAVR 198
D SV N+ S EY G+G + L + W YI +E FK + + G ++VR
Sbjct: 2 DQSVSNVDKSSAF--EYNKXIGHGINXGNALEAPVEGSWGVYIEDEYFKIIKERGFDSVR 59
Query: 199 IPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD 258
IP+ W K P L + + A K + VI++ H G
Sbjct: 60 IPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEELYQAPDKYGPV- 118
Query: 259 GFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTV 318
V I +A + D+P + E+ NEP A +L Y +
Sbjct: 119 ------------LVEIWKQVAQAFKDYPDKLFFEIFNEP-AQNLTPTKWNELYPKVLGEI 165
Query: 319 RKYSSSAYVILSNRLGGEWSELLSFASNLSRV-----VIDVHFYNLF 360
RK + S VI+ WS S+ L V ++ H+Y F
Sbjct: 166 RKTNPSRIVIID---VPNWSN-YSYVRELKLVDDKNIIVSFHYYEPF 208
>pdb|3RJX|A Chain A, Crystal Structure Of Hyperthermophilic
Endo-Beta-1,4-Glucanase
Length = 320
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 84/227 (37%), Gaps = 28/227 (12%)
Query: 142 DPSVFNMTIVSTMHGEYQITNGYGPDKAAKL---MRDHWKSYITEEDFKFMSQNGLNAVR 198
D SV N+ S EY G+G + L + W YI +E FK + + G ++VR
Sbjct: 2 DQSVSNVDKSSAF--EYNKMIGHGINMGNALEAPVEGSWGVYIEDEYFKIIKERGFDSVR 59
Query: 199 IPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD 258
IP+ W K P L + + A K + VI++ H G
Sbjct: 60 IPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEELYQAPDKYGPV- 118
Query: 259 GFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTV 318
V I +A + D+P + E+ NEP A +L Y +
Sbjct: 119 ------------LVEIWKQVAQAFKDYPDKLFFEIFNEP-AQNLTPTKWNELYPKVLGEI 165
Query: 319 RKYSSSAYVILSNRLGGEWSELLSFASNLSRV-----VIDVHFYNLF 360
RK + S VI+ WS S+ L V ++ H+Y F
Sbjct: 166 RKTNPSRIVIID---VPNWSN-YSYVRELKLVDDKNIIVSFHYYEPF 208
>pdb|1ECE|A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic
Domain In Complex With A Cellotetraose
pdb|1ECE|B Chain B, Acidothermus Cellulolyticus Endocellulase E1 Catalytic
Domain In Complex With A Cellotetraose
Length = 358
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 219 SLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDF- 277
SLQ +D +A + G+++I+D H P + W S + E I D
Sbjct: 93 SLQVMDKIVAYAGQIGLRIILDRH--------RPDCSGQSAL--WYTSSVSEATWISDLQ 142
Query: 278 -LASRYADHPSLVAIELMNEPKAP 300
LA RY +P++V +L NEP P
Sbjct: 143 ALAQRYKGNPTVVGFDLHNEPHDP 166
>pdb|1VRX|A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant
Y245g
pdb|1VRX|B Chain B, Endocellulase E1 From Acidothermus Cellulolyticus Mutant
Y245g
Length = 358
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 219 SLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDF- 277
SLQ +D +A + G+++I+D H P + W S + E I D
Sbjct: 93 SLQVMDKIVAYAGQIGLRIILDRH--------RPDCSGQSAL--WYTSSVSEATWISDLQ 142
Query: 278 -LASRYADHPSLVAIELMNEPKAP 300
LA RY +P++V +L NEP P
Sbjct: 143 ALAQRYKGNPTVVGFDLHNEPHDP 166
>pdb|4HTY|A Chain A, Crystal Structure Of A Metagenome-Derived Cellulase Cel5a
pdb|4HU0|A Chain A, Crystal Structure Of A Metagenome-Derived Cellulase Cel5a
In Complex With Cellotetraose
Length = 359
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 166 PDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKP-FVGGSLQALD 224
PDK K R +++ F+ + G N VR+PV P+ K V G L+ LD
Sbjct: 77 PDKIDKDKR------FSKKHFEVIRSWGANVVRVPV------HPRAWKERGVKGYLELLD 124
Query: 225 NAFRWAQKYGMKVIVDLHAL-----RVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLA 279
W + G+ I+D H++ QN S H+ + F W ++
Sbjct: 125 QVVAWNNELGIYTILDWHSIGNLKSEXFQNNSYHTTKGETFDFWRR------------VS 172
Query: 280 SRYADHPSLVAIELMNEPKAPDLKL 304
RY S+ E+ NEP + +L
Sbjct: 173 ERYNGINSVAFYEIFNEPTVFNGRL 197
>pdb|3VDH|A Chain A, Crystal Structure Of A Putative Beta-1,4-Endoglucanase
CELLULASE From Prevotella Bryantii
pdb|3VDH|B Chain B, Crystal Structure Of A Putative Beta-1,4-Endoglucanase
CELLULASE From Prevotella Bryantii
Length = 353
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 162 NGYGPDKAAKLMRDHW-KSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSL 220
NG G K W + T++ F+ QNG NAVRIPV W+ D + G
Sbjct: 33 NGCGTGKPVATYETFWGQPETTQDXXTFLXQNGFNAVRIPVTWYEHXDAE------GNVD 86
Query: 221 QA----LDNAFRWAQKYGMKVIVDLHALRVSQNGS 251
+A + +A G+ IV++H + +G+
Sbjct: 87 EAWXXRVKAIVEYAXNAGLYAIVNVHHDTAAGSGA 121
>pdb|3AYR|A Chain A, Gh5 Endoglucanase Egla From A Ruminal Fungus
Length = 376
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Query: 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDL 241
TE+ FK + N N RIP W + P L+ + + K G VI++L
Sbjct: 64 TEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNL 123
Query: 242 HALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD 301
H H F E D+ + I +A + D+ + E +NEP+ D
Sbjct: 124 H----------HETWNHAFSETLDTAKEILEKIWSQIAEEFKDYDEHLIFEGLNEPRKND 173
Query: 302 LKLD 305
++
Sbjct: 174 TPVE 177
>pdb|2OSW|A Chain A, Endo-Glycoceramidase Ii From Rhodococcus Sp.
pdb|2OSW|B Chain B, Endo-Glycoceramidase Ii From Rhodococcus Sp.
pdb|2OYK|A Chain A, Endo-Glycoceramidase Ii From Rhodococcus Sp.:
Cellobiose-Like Isofagomine Complex
pdb|2OYK|B Chain B, Endo-Glycoceramidase Ii From Rhodococcus Sp.:
Cellobiose-Like Isofagomine Complex
pdb|2OYL|A Chain A, Endo-Glycoceramidase Ii From Rhodococcus Sp.:
Cellobiose-Like Imidazole Complex
pdb|2OYL|B Chain B, Endo-Glycoceramidase Ii From Rhodococcus Sp.:
Cellobiose-Like Imidazole Complex
pdb|2OYM|A Chain A, Endo-Glycoceramidase Ii From Rhodococcus Sp.:
Five-Membered Iminocyclitol Complex
pdb|2OYM|B Chain B, Endo-Glycoceramidase Ii From Rhodococcus Sp.:
Five-Membered Iminocyclitol Complex
Length = 481
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 278 LASRYADHPSLVAIELMNEP-----KAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNR 332
+A R+AD+ ++VA +LMNEP + P + L Y+ D +R+ +V ++ +
Sbjct: 206 VADRFADNDAVVAYDLMNEPFGGSLQGPAFEAGPLAAMYQRTTDAIRQVDQDTWVCVAPQ 265
Query: 333 LGGEWSELLSFASNLS-------RVVIDVHFYNLFWD 362
G L S + + R+ H Y L D
Sbjct: 266 AIGVNQGLPSGLTKIDDPRAGQQRIAYCPHLYPLPLD 302
>pdb|2OSX|A Chain A, Endo-glycoceramidase Ii From Rhodococcus Sp.: Ganglioside
Gm3 Complex
Length = 481
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 278 LASRYADHPSLVAIELMNEP-----KAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNR 332
+A R+AD+ ++VA +LMNEP + P + L Y+ D +R+ +V ++ +
Sbjct: 206 VADRFADNDAVVAYDLMNEPFGGSLQGPAFEAGPLAAMYQRTTDAIRQVDQDTWVCVAPQ 265
Query: 333 LGGEWSELLSFASNLS-------RVVIDVHFYNLFWD 362
G L S + + R+ H Y L D
Sbjct: 266 AIGVNQGLPSGLTKIDDPRAGQQRIAYCPHLYPLPLD 302
>pdb|3QR3|A Chain A, Crystal Structure Of Cel5a (Eg2) From Hypocrea Jecorina
(Trichoderma Reesei)
pdb|3QR3|B Chain B, Crystal Structure Of Cel5a (Eg2) From Hypocrea Jecorina
(Trichoderma Reesei)
Length = 340
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 71/188 (37%), Gaps = 35/188 (18%)
Query: 188 FMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVS 247
F++++G+ R+PVGW + S+ D + G IVD+H
Sbjct: 51 FVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIHNYARW 110
Query: 248 QNGSPHSGSRDGFQ---EWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKL 304
G G Q WS LAS+YA S V +MNEP D+ +
Sbjct: 111 NGGIIGQGGPTNAQFTSLWSQ------------LASKYASQ-SRVWFGIMNEPH--DVNI 155
Query: 305 DSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSF-----ASNLSRV--------- 350
++ + +R +++ I + G +W +F A+ LS+V
Sbjct: 156 NTWAATVQEVVTAIRNAGATSQFI--SLPGNDWQSAGAFISDGSAAALSQVTNPDGSTTN 213
Query: 351 -VIDVHFY 357
+ DVH Y
Sbjct: 214 LIFDVHKY 221
>pdb|3AYS|A Chain A, Gh5 Endoglucanase From A Ruminal Fungus In Complex With
Cellotriose
Length = 376
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 10/124 (8%)
Query: 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDL 241
TE+ FK + N N RIP W + P L+ + + K G VI++L
Sbjct: 64 TEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNL 123
Query: 242 HALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD 301
H H F E D+ + I +A + D+ + E +N P+ D
Sbjct: 124 H----------HETWNHAFSETLDTAKEILEKIWSQIAEEFKDYDEHLIFEGLNAPRKND 173
Query: 302 LKLD 305
++
Sbjct: 174 TPVE 177
>pdb|2OSY|A Chain A, Endo-Glycoceramidase Ii From Rhodococcus Sp.: Lactosyl-
Enzyme Intermediate
pdb|2OSY|B Chain B, Endo-Glycoceramidase Ii From Rhodococcus Sp.: Lactosyl-
Enzyme Intermediate
Length = 481
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 12/97 (12%)
Query: 278 LASRYADHPSLVAIELMNEP-----KAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNR 332
+A R+AD+ ++VA +LMN P + P + L Y+ D +R+ +V ++ +
Sbjct: 206 VADRFADNDAVVAYDLMNAPFGGSLQGPAFEAGPLAAMYQRTTDAIRQVDQDTWVCVAPQ 265
Query: 333 LGGEWSELLSFASNLS-------RVVIDVHFYNLFWD 362
G L S + + R+ H Y L D
Sbjct: 266 AIGVNQGLPSGLTKIDDPRAGQQRIAYCPHLYPLPLD 302
>pdb|1RH9|A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon
Esculentum (Tomato)
Length = 373
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 30/105 (28%)
Query: 220 LQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLA 279
Q LD A+KYG+ +I+ L N G + + EW+ Q+ + DF
Sbjct: 84 FQGLDFVISEAKKYGIHLIMSL------VNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFT 137
Query: 280 S------------------------RYADHPSLVAIELMNEPKAP 300
+ Y D P++++ EL+NEP+ P
Sbjct: 138 NPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCP 182
>pdb|1QNO|A Chain A, The 3-d Structure Of A Trichoderma Reesei B-mannanase From
Glycoside Hydrolase Family 5
pdb|1QNP|A Chain A, The 3-d Structure Of A Trichoderma Reesei B-mannanase From
Glycoside Hydrolase Family 5
pdb|1QNQ|A Chain A, The 3-d Structure Of A Trichoderma Reesei B-mannanase From
Glycoside Hydrolase Family 5
pdb|1QNR|A Chain A, The 3-d Structure Of A Trichoderma Reesei B-mannanase From
Glycoside Hydrolase Family 5
pdb|1QNS|A Chain A, The 3-d Structure Of A Trichoderma Reesei B-mannanase From
Glycoside Hydrolase Family 5
Length = 344
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 88/230 (38%), Gaps = 50/230 (21%)
Query: 176 HWKSYIT-----EEDFKFMSQNGLNAVRIPVGWW----IAYDPKPPKPFV---------- 216
+W S++T + F +S +GL VR+ W + P P + +
Sbjct: 27 YWCSFLTNHADVDSTFSHISSSGLKVVRV----WGFNDVNTQPSPGQIWFQKLSATGSTI 82
Query: 217 ---GGSLQALDNAFRWAQKYGMKVIV-------DLHALRVSQNGSPHSGSRDGFQEWSDS 266
LQ LD + A+++ +K+I+ D + N + + W +
Sbjct: 83 NTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYGGINAYVNAFGGNATT-----WYTN 137
Query: 267 DIQETV--AIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSS 324
+T + + SRYA+ ++ A EL NEP+ D + + + V+ S+
Sbjct: 138 TAAQTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSN 197
Query: 325 AYVILSNRLGG----------EWSELLSFASNLSRVVIDVHFYNLFWDNF 364
V L + G + E FA N+ +D ++L+ D++
Sbjct: 198 HLVTLGDEGLGLSTGDGAYPYTYGEGTDFAKNVQIKSLDFGTFHLYPDSW 247
>pdb|2CKS|A Chain A, X-Ray Crystal Structure Of The Catalytic Domain Of
Thermobifida Fusca Endoglucanase Cel5a (E5)
pdb|2CKS|B Chain B, X-Ray Crystal Structure Of The Catalytic Domain Of
Thermobifida Fusca Endoglucanase Cel5a (E5)
Length = 306
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 91/236 (38%), Gaps = 53/236 (22%)
Query: 212 PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQET 271
P+ F Q +D A G+ VIVD H L G PH ++
Sbjct: 75 PRGFTDRMHQLID----MATARGLYVIVDWHIL---TPGDPHY------------NLDRA 115
Query: 272 VAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN 331
+A R+A + V E+ NEP + S+K+Y + +R+ + +I+
Sbjct: 116 KTFFAEIAQRHASKTN-VLYEIANEPNG--VSWASIKSYAEEVIPVIRQRDPDSVIIVGT 172
Query: 332 R--------LGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQR-SS 382
R G +E+ + N S ++ HFY + +Y+ R +S
Sbjct: 173 RGWSSLGVSEGSGPAEIAANPVNASNIMYAFHFY----------AASHRDNYLNALREAS 222
Query: 383 DLRNVTTSDGPLSFVGEWSCE-WEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAY 437
+L V FV E+ E + +GA+ D+Q A+ +D+ GW W Y
Sbjct: 223 ELFPV--------FVTEFGTETYTGDGAN--DFQ-MADRYIDLMAERKIGWTKWNY 267
>pdb|3I5A|A Chain A, Crystal Structure Of Full-Length Wpsr From Pseudomonas
Syringae
Length = 334
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 319 RKYSSSAYVILSNR------LGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQN 372
R +S LSNR L EW + LS ++IDV ++ + DNF +
Sbjct: 167 RLMNSDGLTGLSNRRHFDEYLELEWRRATRDQAQLSLLMIDVDYFKAYNDNFGHLEG--- 223
Query: 373 IDYIYRQRSSDLRNVTT--SDGPLSFVGE 399
D RQ + +RN + SD P + GE
Sbjct: 224 -DEALRQVAKAIRNSCSRPSDLPARYGGE 251
>pdb|2CKR|A Chain A, X-Ray Crystal Structure Of The Catalytic Domain Of
Thermobifida Fusca Endoglucanase Cel5a (E5) E355q In
Complex With Cellotetraose
pdb|2CKR|B Chain B, X-Ray Crystal Structure Of The Catalytic Domain Of
Thermobifida Fusca Endoglucanase Cel5a (E5) E355q In
Complex With Cellotetraose
Length = 306
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 86/234 (36%), Gaps = 49/234 (20%)
Query: 212 PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQET 271
P+ F Q +D A G+ VIVD H L G PH ++
Sbjct: 75 PRGFTDRMHQLIDMA----TARGLYVIVDWHIL---TPGDPHY------------NLDRA 115
Query: 272 VAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN 331
+A R+A + V E+ NEP + S+K+Y + +R+ + +I+
Sbjct: 116 KTFFAEIAQRHASKTN-VLYEIANEPNG--VSWASIKSYAEEVIPVIRQRDPDSVIIVGT 172
Query: 332 R--------LGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSD 383
R G +E+ + N S ++ HFY S + N R+ S
Sbjct: 173 RGWSSLGVSEGSGPAEIAANPVNASNIMYAFHFY--------AASHRDNYLNALREASEL 224
Query: 384 LRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAY 437
T G ++ G+ GA+ D+Q A+ +D+ GW W Y
Sbjct: 225 FPVFVTQFGTETYTGD--------GAN--DFQ-MADRYIDLMAERKIGWTKWNY 267
>pdb|1XHC|A Chain A, Nadh Oxidase /nitrite Reductase From Pyrococcus Furiosus
Pfu-1140779- 001
Length = 367
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 41 LMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQF--IGLENQGNKLVAVSATEKFPEPF 98
++ N + + S T R I++ NFR S K IG + + ++A +A +
Sbjct: 232 IVPNVDLARRSGIHTGRGILIDD---NFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQAR 288
Query: 99 QITR-KNGEPHRVRFRASNGYFLQAKSEMQVTADYKGPSTWEENDPSVF 146
+ GEP R F+ + F K ++ + + KG W E++ VF
Sbjct: 289 VLADILKGEPRRYNFKFRSTVFKFGKLQIAIIGNTKGEGKWIEDNTKVF 337
>pdb|3PZT|A Chain A, Structure Of The Endo-1,4-Beta-Glucanase From Bacillus
Subtilis 168 With Manganese(Ii) Ion
pdb|3PZT|B Chain B, Structure Of The Endo-1,4-Beta-Glucanase From Bacillus
Subtilis 168 With Manganese(Ii) Ion
pdb|3PZU|A Chain A, P212121 Crystal Form Of The Endo-1,4-Beta-Glucanase From
Bacillus Subtilis 168
pdb|3PZU|B Chain B, P212121 Crystal Form Of The Endo-1,4-Beta-Glucanase From
Bacillus Subtilis 168
pdb|3PZV|A Chain A, C2 Crystal Form Of The Endo-1,4-Beta-Glucanase From
Bacillus Subtilis 168
pdb|3PZV|B Chain B, C2 Crystal Form Of The Endo-1,4-Beta-Glucanase From
Bacillus Subtilis 168
pdb|3PZV|C Chain C, C2 Crystal Form Of The Endo-1,4-Beta-Glucanase From
Bacillus Subtilis 168
pdb|3PZV|D Chain D, C2 Crystal Form Of The Endo-1,4-Beta-Glucanase From
Bacillus Subtilis 168
Length = 327
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 58/136 (42%), Gaps = 23/136 (16%)
Query: 226 AFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADH 285
A A++ G+ VI+D H L +++ F+E ++S Y +
Sbjct: 110 AVEAAKELGIYVIIDWHILNDGNPNQNKEKAKEFFKE---------------MSSLYGNT 154
Query: 286 PSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFAS 345
P+++ E+ NEP +K Y + +RK +I+ G WS+ ++ A+
Sbjct: 155 PNVI-YEIANEPNGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVGT---GTWSQDVNDAA 210
Query: 346 N----LSRVVIDVHFY 357
+ + V+ +HFY
Sbjct: 211 DDQLKDANVMYALHFY 226
>pdb|1KWG|A Chain A, Crystal Structure Of Thermus Thermophilus A4
Beta-Galactosidase
pdb|1KWK|A Chain A, Crystal Structure Of Thermus Thermophilus A4
Beta-Galactosidase In Complex With Galactose
Length = 645
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 175 DHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQ--ALDNAFRWAQK 232
+HW +ED + M + GL+ VRI W +P+P G L+ LD A
Sbjct: 9 EHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEP------GRLEWGWLDEAIATLAA 62
Query: 233 YGMKVIV 239
G+KV++
Sbjct: 63 EGLKVVL 69
>pdb|1EDG|A Chain A, Single Crystal Structure Determination Of The Catalytic
Domain Of Celcca Carried Out At 15 Degree C
Length = 380
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 23/125 (18%)
Query: 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGS--------LQALDNAFRWAQKY 233
T++ + Q G N VRIPV W P V GS + + +
Sbjct: 63 TKQMIDAIKQKGFNTVRIPVSW---------HPHVSGSDYKISDVWMNRVQEVVNYCIDN 113
Query: 234 GMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIEL 293
M VI++ H G S ++ S + ++ +A+R+A++ + E
Sbjct: 114 KMYVILNTHHDVDKVKGYFPS------SQYMASSKKYITSVWAQIAARFANYDEHLIFEG 167
Query: 294 MNEPK 298
MNEP+
Sbjct: 168 MNEPR 172
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,739,015
Number of Sequences: 62578
Number of extensions: 692769
Number of successful extensions: 1677
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1592
Number of HSP's gapped (non-prelim): 65
length of query: 535
length of database: 14,973,337
effective HSP length: 103
effective length of query: 432
effective length of database: 8,527,803
effective search space: 3684010896
effective search space used: 3684010896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)