Your job contains 1 sequence.
>046396
MDLTNNINTNKNPDTETESPPKIILPKNKKSQSFYTSSSFVPPLQMVVSYKECLKNHAAS
LGGHALDGCGEFMPSPTATSNDPASLNCAACGCHRNFHRRDPYEPNAAATHRLPPAATAS
HSTDPSTVPSPDTNTNSPQHHQPVTSPTPCSYYSSAPHMLLALSTGFSAPPDDGDDNHPR
HHHYPQHQPPFNQVLAANSSDNGKKRSRTKFTQEQKEKMLSFAERLGWKMNRAEEKLTQD
FCSEVGVSRRVFKVWMHNNKNASGRKDQRSINNKNINDIVNGCSRVSFDVNGNCKNHNDG
NGNGSVAVSPKCEE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046396
(314 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2167052 - symbol:HB23 "AT5G39760" species:3702... 538 7.2e-52 1
TAIR|locus:2095157 - symbol:HB34 "AT3G28920" species:3702... 494 3.3e-47 1
TAIR|locus:2175138 - symbol:HB26 "AT5G60480" species:3702... 258 2.6e-45 2
TAIR|locus:2012602 - symbol:HB31 "AT1G14440" species:3702... 253 9.5e-42 2
TAIR|locus:2121989 - symbol:HB22 "AT4G24660" species:3702... 227 1.9e-39 2
TAIR|locus:2065304 - symbol:HB21 "homeobox protein 21" sp... 409 3.4e-38 1
TAIR|locus:2025121 - symbol:HB33 "AT1G75240" species:3702... 403 1.5e-37 1
TAIR|locus:2077957 - symbol:HB28 "homeobox protein 28" sp... 204 2.7e-36 2
TAIR|locus:2026734 - symbol:ZFHD1 "AT1G69600" species:370... 384 1.5e-35 1
TAIR|locus:2062141 - symbol:HB24 "AT2G18350" species:3702... 219 2.4e-35 2
TAIR|locus:2165502 - symbol:HB27 "AT5G42780" species:3702... 178 7.0e-29 2
TAIR|locus:2150871 - symbol:HB30 "AT5G15210" species:3702... 301 9.4e-27 1
TAIR|locus:505006123 - symbol:HB32 "AT1G14687" species:37... 147 4.8e-22 2
TAIR|locus:2168240 - symbol:HB25 "AT5G65410" species:3702... 215 7.3e-20 2
TAIR|locus:4010713452 - symbol:MIF3 "mini zinc finger 3" ... 190 7.0e-15 1
TAIR|locus:1006230234 - symbol:MIF2 "mini zinc finger 2" ... 188 1.2e-14 1
TAIR|locus:2019190 - symbol:MIF1 "AT1G74660" species:3702... 186 2.1e-14 1
MGI|MGI:96176 - symbol:Hoxa4 "homeobox A4" species:10090 ... 117 0.00016 1
>TAIR|locus:2167052 [details] [associations]
symbol:HB23 "AT5G39760" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR009057 Pfam:PF04770
EMBL:CP002688 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AB016876 InterPro:IPR006455 InterPro:IPR006456 ProDom:PD125774
TIGRFAMs:TIGR01565 TIGRFAMs:TIGR01566 PROSITE:PS51523 EMBL:AY091034
EMBL:AY117347 IPI:IPI00522080 RefSeq:NP_568570.1 UniGene:At.9361
SMR:Q9FIW9 IntAct:Q9FIW9 STRING:Q9FIW9 EnsemblPlants:AT5G39760.1
GeneID:833972 KEGG:ath:AT5G39760 TAIR:At5g39760 InParanoid:Q9FIW9
OMA:STAVEYQ ProtClustDB:CLSN2684082 Genevestigator:Q9FIW9
Uniprot:Q9FIW9
Length = 334
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 125/306 (40%), Positives = 167/306 (54%)
Query: 1 MDLTNNINTN-----KNPDTETESPPKIILPKNKKSQSFYTSSSFVPPLQMVVSYKECLK 55
MD+T I T K+P+ E+E+P +I K + ++ +YKECLK
Sbjct: 2 MDMTPTITTTTTPTPKSPEPESETPTRIQPAKPISFSNGIIKRHHHHHHPLLFTYKECLK 61
Query: 56 NHAASLGGHALDGCGEFMPSPTATSNDPASLNCAACGCHRNFHRRDPYEPNAAATHRLPP 115
NHAA+LGGHALDGCGEFMPSP++ S+DP SL CAACGCHRNFHRRDP N ++ PP
Sbjct: 62 NHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRDPDNNNDSSQIPPPP 121
Query: 116 AATASHSTDPSTVPSPDTNTNSPQHHQPVTSPTPCSYYSSAPHMLLALSTGFSAPPDDGD 175
+ + P P P+ SP P S SS +MLL+LS G ++ +
Sbjct: 122 STAVEYQPHHRHHPPPPPPPPPPRSPNSA-SPPPIS--SS--YMLLSLS-G----TNNNN 171
Query: 176 DNXXXXXXXXXXXXXFNQVLAANSSDNGKKRSRTKFTQEQKEKMLSFAERLGWKMNRAEE 235
+N + ++ +KR RTKF+Q QKEKM FAER+GWKM + +E
Sbjct: 172 NNLASFSDLNFSAGNNHHHHHQHTLHGSRKRFRTKFSQFQKEKMHEFAERVGWKMQKRDE 231
Query: 236 KLTQDFCSEVGVSRRVFKVWMHNNKNASGRKDQRSINNKNINDIVNGCSRVSFDVNGNCK 295
+DFC ++GV + V KVWMHNNKN R+D I I I NG + + G
Sbjct: 232 DDVRDFCRQIGVDKSVLKVWMHNNKNTFNRRD---IAGNEIRQIDNGGGNHTPILAGEIN 288
Query: 296 NHNDGN 301
NHN+G+
Sbjct: 289 NHNNGH 294
>TAIR|locus:2095157 [details] [associations]
symbol:HB34 "AT3G28920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR009057
Pfam:PF04770 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000238105
InterPro:IPR006455 InterPro:IPR006456 ProDom:PD125774
TIGRFAMs:TIGR01565 TIGRFAMs:TIGR01566 PROSITE:PS51523
ProtClustDB:CLSN2684082 EMBL:AY093171 EMBL:AY128820 EMBL:AP002049
IPI:IPI00528457 RefSeq:NP_189534.1 UniGene:At.19633
UniGene:At.74192 ProteinModelPortal:Q9LHF0 SMR:Q9LHF0 IntAct:Q9LHF0
STRING:Q9LHF0 PaxDb:Q9LHF0 PRIDE:Q9LHF0 ProMEX:Q9LHF0
EnsemblPlants:AT3G28920.1 GeneID:822527 KEGG:ath:AT3G28920
TAIR:At3g28920 eggNOG:NOG250157 InParanoid:Q9LHF0 OMA:KRDEDEV
PhylomeDB:Q9LHF0 ArrayExpress:Q9LHF0 Genevestigator:Q9LHF0
Uniprot:Q9LHF0
Length = 312
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 127/319 (39%), Positives = 170/319 (53%)
Query: 9 TNKNPDTETESPPKIILPKNKK-SQSFYTSSSFVPPLQMVVSYKECLKNHAASLGGHALD 67
T K+P+ E+E+P +I K S V+YKECLKNHAA++GGHALD
Sbjct: 10 TPKSPEPESETPTRIQPAKPISFSNGIIKRHHHHHHNNNKVTYKECLKNHAAAIGGHALD 69
Query: 68 GCGEFMPSPTATSNDPASLNCAACGCHRNFHRRDPYEPNAAATHRLPPAATASHSTDPST 127
GCGEFMPSP++T +DP SL CAACGCHRNFHRR+ + +A PP+ S +T +
Sbjct: 70 GCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDDSSAVP----PPSLLPSSTTTAAI 125
Query: 128 VPSPDTNTNSPQHHQPVTSPTPCSYYSSAP------HMLLALSTGFSAPPDDGDDNXXXX 181
P + P P+ P P S SS+P +MLLALS P D N
Sbjct: 126 EYQPHHRHHPPP---PLAPPLPRSPNSSSPPPISSSYMLLALSGNNKTAPFS-DLNFAAA 181
Query: 182 XXXXXXXXXFNQVLAANSSDNGKKRSRTKFTQEQKEKMLSFAERLGWKMNRAEEKLTQDF 241
N + A S +KR RTKF+ QKEKM FA+R+GWK+ + +E +DF
Sbjct: 182 A---------NHLSATPGS---RKRFRTKFSSNQKEKMHEFADRIGWKIQKRDEDEVRDF 229
Query: 242 CSEVGVSRRVFKVWMHNNKNA---SG------RKDQRSINNKNINDI-VNGCSRVSFDVN 291
C E+GV + V KVWMHNNKN+ SG +++ I +N ND V G +
Sbjct: 230 CREIGVDKGVLKVWMHNNKNSFKFSGGGATTVQRNDNGIGGENSNDDGVRGLANDGDGGG 289
Query: 292 GNCKNHNDG-NGNGSVAVS 309
G ++ + G +G G+V S
Sbjct: 290 GRFESDSGGADGGGNVNAS 308
>TAIR|locus:2175138 [details] [associations]
symbol:HB26 "AT5G60480" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR009057
Pfam:PF04770 EMBL:CP002688 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR006455 InterPro:IPR006456
ProDom:PD125774 TIGRFAMs:TIGR01565 TIGRFAMs:TIGR01566
PROSITE:PS51523 IPI:IPI00527618 RefSeq:NP_200856.1 UniGene:At.55644
ProteinModelPortal:F4JYZ9 SMR:F4JYZ9 EnsemblPlants:AT5G60480.1
GeneID:836169 KEGG:ath:AT5G60480 Uniprot:F4JYZ9
Length = 191
Score = 258 (95.9 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 47/71 (66%), Positives = 50/71 (70%)
Query: 46 MVVSYKECLKNHAASLGGHALDGCGEFMPSPTATSNDPASLNCAACGCHRNFHRRDPYEP 105
MVV Y ECLKNHA SLGGHALDGCGEF P T DP SL C ACGCHRNFHRR P +
Sbjct: 1 MVVLYNECLKNHAVSLGGHALDGCGEFTPKSTTILTDPPSLRCDACGCHRNFHRRSPSD- 59
Query: 106 NAAATHRLPPA 116
+ HR PP+
Sbjct: 60 -GFSQHRSPPS 69
Score = 235 (87.8 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 53/139 (38%), Positives = 73/139 (52%)
Query: 139 QHHQPVTSPTPCSYYSSAPHMLLALSTGFSAPPDDGDDNXXXXXXXXXXXXXFNQVLAAN 198
QH P SP + P++LL+LS+GF P D N
Sbjct: 63 QHRSP-PSPLQLQPLAPVPNLLLSLSSGFFGPSDQEVKNKFTVERDVRKTAMI------- 114
Query: 199 SSDNGKKRSRTKFTQEQKEKMLSFAERLGWKMNRAEEKLTQDFCSEVGVSRRVFKVWMHN 258
KK RTKFT EQK KM FAER GWK+N +EK ++FCSEVG+ R+V KVW+HN
Sbjct: 115 -----KKHKRTKFTAEQKVKMRGFAERAGWKINGWDEKWVREFCSEVGIERKVLKVWIHN 169
Query: 259 NKNASGRKDQRSINNKNIN 277
NK + + + + ++ ++N
Sbjct: 170 NKYFNNGRSRDTTSSMSLN 188
>TAIR|locus:2012602 [details] [associations]
symbol:HB31 "AT1G14440" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR009057 Pfam:PF04770 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC012188 HOGENOM:HOG000238105
InterPro:IPR006455 InterPro:IPR006456 ProDom:PD125774
TIGRFAMs:TIGR01565 TIGRFAMs:TIGR01566 PROSITE:PS51523
eggNOG:NOG244803 ProtClustDB:CLSN2682946 EMBL:AY074266
EMBL:AY096738 EMBL:AB493456 IPI:IPI00526436 PIR:A86279
RefSeq:NP_172896.1 RefSeq:NP_973826.1 UniGene:At.41972
ProteinModelPortal:Q9M9S0 SMR:Q9M9S0 IntAct:Q9M9S0 STRING:Q9M9S0
PaxDb:Q9M9S0 PRIDE:Q9M9S0 EnsemblPlants:AT1G14440.1
EnsemblPlants:AT1G14440.2 GeneID:838006 KEGG:ath:AT1G14440
TAIR:At1g14440 InParanoid:Q9M9S0 OMA:HHAANSA PhylomeDB:Q9M9S0
ArrayExpress:Q9M9S0 Genevestigator:Q9M9S0 Uniprot:Q9M9S0
Length = 312
Score = 253 (94.1 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 50/92 (54%), Positives = 66/92 (71%)
Query: 202 NGKKRSRTKFTQEQKEKMLSFAERLGWKMNRAEEKLTQDFCSEVGVSRRVFKVWMHNNKN 261
N KKR RTKFT EQKEKMLSFAE++GWK+ R E+ + Q FC E+GV RRV KVWMHNNK
Sbjct: 216 NQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQEDCVVQRFCEEIGVKRRVLKVWMHNNKI 275
Query: 262 ASGRKDQRSINNKNINDIVNGCSRVSFDVNGN 293
+K+ ++ + N N+ +N + V D++GN
Sbjct: 276 HFSKKNNINLED-NDNEKINNLNNV--DLSGN 304
Score = 206 (77.6 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 41/74 (55%), Positives = 52/74 (70%)
Query: 47 VVSYKECLKNHAASLGGHALDGCGEFMPSPTATSNDPASLNCAACGCHRNFHRRDPYEPN 106
++ YKECLKNHAA++GG+A DGCGEFMPS S + +L C+AC CHRNFHR++ E
Sbjct: 87 MIKYKECLKNHAAAMGGNATDGCGEFMPSGEDGSIE--ALTCSACNCHRNFHRKE-VEGE 143
Query: 107 AAAT-----HRLPP 115
AAT H+ PP
Sbjct: 144 LAATAMSPYHQHPP 157
Score = 47 (21.6 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 83 PASLNCAACGCHRNF-HRRDPYEPNAAATHRLPPAATASHSTDPSTVP-SPDTNTNSPQH 140
P + G H + H D + N+A PP +++T P +P + + N+ H
Sbjct: 14 PLNTTFGGGGSHGHMIHHHDHHAANSA-----PPTHNNNNTTQPPPMPLHGNGHGNNYDH 68
Query: 141 H 141
H
Sbjct: 69 H 69
>TAIR|locus:2121989 [details] [associations]
symbol:HB22 "AT4G24660" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA;IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0009740 "gibberellic acid
mediated signaling pathway" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] InterPro:IPR009057 PROSITE:PS00027 PROSITE:PS50071
Pfam:PF04770 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
GO:GO:0009793 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL035356
EMBL:AL161561 HOGENOM:HOG000238105 InterPro:IPR006455
InterPro:IPR006456 ProDom:PD125774 TIGRFAMs:TIGR01565
TIGRFAMs:TIGR01566 PROSITE:PS51523 EMBL:AF439841 EMBL:AY125563
IPI:IPI00528145 PIR:T05568 RefSeq:NP_194197.1 UniGene:At.2543
PDB:1WH7 PDBsum:1WH7 ProteinModelPortal:Q9SB61 SMR:Q9SB61
IntAct:Q9SB61 STRING:Q9SB61 EnsemblPlants:AT4G24660.1 GeneID:828568
KEGG:ath:AT4G24660 TAIR:At4g24660 eggNOG:NOG244803
InParanoid:Q9SB61 OMA:NHAVNIG PhylomeDB:Q9SB61
ProtClustDB:CLSN2915852 EvolutionaryTrace:Q9SB61
Genevestigator:Q9SB61 GermOnline:AT4G24660 Uniprot:Q9SB61
Length = 220
Score = 227 (85.0 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 198 NSSDNGKKRSRTKFTQEQKEKMLSFAERLGWKMNRAEEKLTQDFCSEVGVSRRVFKVWMH 257
+SS KR RTKFT EQKEKML+FAERLGW++ + ++ + FC+E GV R+V K+WMH
Sbjct: 151 SSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMH 210
Query: 258 NNKNASGRK 266
NNKN+ G+K
Sbjct: 211 NNKNSLGKK 219
Score = 210 (79.0 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 48 VSYKECLKNHAASLGGHALDGCGEFMPSPTATSNDPASLNCAACGCHRNFHRRDPYEPNA 107
+ Y+ECLKNHA ++GGHA+DGC EFMPS + D +L CAACGCHRNFHR++ E
Sbjct: 47 IRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLD--ALKCAACGCHRNFHRKET-ESIG 103
Query: 108 AATHRLP 114
HR+P
Sbjct: 104 GRAHRVP 110
>TAIR|locus:2065304 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IPI] InterPro:IPR001356 InterPro:IPR009057 PROSITE:PS50071
Pfam:PF04770 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AC004136 HOGENOM:HOG000238105 InterPro:IPR006455
InterPro:IPR006456 ProDom:PD125774 TIGRFAMs:TIGR01565
TIGRFAMs:TIGR01566 PROSITE:PS51523 EMBL:AY773834 IPI:IPI00531101
PIR:T00609 RefSeq:NP_178358.1 UniGene:At.41484
ProteinModelPortal:O64722 SMR:O64722 IntAct:O64722 STRING:O64722
EnsemblPlants:AT2G02540.1 GeneID:814784 KEGG:ath:AT2G02540
TAIR:At2g02540 eggNOG:NOG246209 InParanoid:O64722 OMA:HHANSAP
PhylomeDB:O64722 ProtClustDB:CLSN2682946 ArrayExpress:O64722
Genevestigator:O64722 Uniprot:O64722
Length = 310
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 95/236 (40%), Positives = 124/236 (52%)
Query: 46 MVVSYKECLKNHAASLGGHALDGCGEFMPSPTATSNDPASLNCAACGCHRNFHRRDPYEP 105
+V+ YKECLKNHAA++GG+A+DGCGEFMPS S + +L C+ C CHRNFHRR+
Sbjct: 83 VVIKYKECLKNHAATMGGNAIDGCGEFMPSGEEGSIE--ALTCSVCNCHRNFHRRET--E 138
Query: 106 NAAATHRLPPAATASHSTDPSTVPSPDTNTNSPQHHQPVTSPTPCSYYSSAPHMLLALST 165
T P +H P P HH+ + SP P M++ +
Sbjct: 139 GEEKTFFSP---YLNHHQPP-----PQQR-KLMFHHKMIKSPLP-------QQMIMPIGV 182
Query: 166 GFSAPPDDGDDNXXXXXXXXXXXXXFNQVLAANS----SDNGKKRSRTKFTQEQKEKMLS 221
+ + +D F Q S N KKR RTKFTQEQKEKM+S
Sbjct: 183 TTAGSNSESED---LMEEEGGGSLTFRQPPPPPSPYSYGHNQKKRFRTKFTQEQKEKMIS 239
Query: 222 FAERLGWKMNRAEEKLTQDFCSEVGVSRRVFKVWMHNNKNASGRKDQRSINNKNIN 277
FAER+GWK+ R EE + Q C E+G+ RRV KVWMHNNK +K NN +++
Sbjct: 240 FAERVGWKIQRQEESVVQQLCQEIGIRRRVLKVWMHNNKQNLSKKSNNVSNNVDLS 295
>TAIR|locus:2025121 [details] [associations]
symbol:HB33 "AT1G75240" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003677 "DNA binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] InterPro:IPR009057 Pfam:PF04770 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0045893
GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AC025814 HOGENOM:HOG000238105 InterPro:IPR006455
InterPro:IPR006456 ProDom:PD125774 TIGRFAMs:TIGR01565
TIGRFAMs:TIGR01566 PROSITE:PS51523 EMBL:AY084462 EMBL:BT028894
EMBL:AK229038 IPI:IPI00537666 PIR:G96782 RefSeq:NP_565106.1
UniGene:At.34802 ProteinModelPortal:Q9FRL5 SMR:Q9FRL5 IntAct:Q9FRL5
STRING:Q9FRL5 PRIDE:Q9FRL5 EnsemblPlants:AT1G75240.1 GeneID:843861
KEGG:ath:AT1G75240 TAIR:At1g75240 eggNOG:NOG293842
InParanoid:Q9FRL5 OMA:SHEMIER PhylomeDB:Q9FRL5
ProtClustDB:CLSN2917451 Genevestigator:Q9FRL5 Uniprot:Q9FRL5
Length = 309
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 105/279 (37%), Positives = 139/279 (49%)
Query: 2 DLTNNINTNKNPDTETESPPKIILPKNKKSQSFYTSSSFVPPLQMVVSYKECLKNHAASL 61
++ +N N N N +T + + KS S ++ S+ P V Y+ECLKNHAAS+
Sbjct: 32 NIDDNCNGNNN-NTRVSCNSQTLDHHQSKSPSSFSISAAAKP---TVRYRECLKNHAASV 87
Query: 62 GGHALDGCGEFMPSPTATSNDPASLNCAACGCHRNFHRRDP----------------YEP 105
GG DGCGEFMPS + + +L CAAC CHRNFHR++ Y
Sbjct: 88 GGSVHDGCGEFMPSGEEGTIE--ALRCAACDCHRNFHRKEMDGVGSSDLISHHRHHHYHH 145
Query: 106 N--AAATHRLPPAATASHSTDPSTVPSPDTNTNSPQHHQPVTSPTPCSYYSSAPHMLLAL 163
N R PP +P +P P N HH+ SP P P M +A
Sbjct: 146 NQYGGGGGRRPPPPNMM--LNPLMLPPPP-NYQPIHHHKYGMSP-PGGGGMVTP-MSVAY 200
Query: 164 STGFSAPPDDGDD-NXXXXXXXXXXXXXFNQVLAANSSDNGKKRSRTKFTQEQKEKMLSF 222
G +D N Q+ A S + KKR RTKFT +QKE+M+ F
Sbjct: 201 GGGGGGAESSSEDLNLYGQSSGEGAGAAAGQM--AFSMSSSKKRFRTKFTTDQKERMMDF 258
Query: 223 AERLGWKMNRAEEKLTQDFCSEVGVSRRVFKVWMHNNKN 261
AE+LGW+MN+ +E+ + FC E+GV R+VFKVWMHNNKN
Sbjct: 259 AEKLGWRMNKQDEEELKRFCGEIGVKRQVFKVWMHNNKN 297
>TAIR|locus:2077957 [details] [associations]
symbol:HB28 "homeobox protein 28" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 PROSITE:PS50071 Pfam:PF04770
EMBL:CP002686 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL049862 InterPro:IPR006455
InterPro:IPR006456 ProDom:PD125774 TIGRFAMs:TIGR01565
TIGRFAMs:TIGR01566 PROSITE:PS51523 EMBL:AK175649 IPI:IPI00536721
PIR:T08410 RefSeq:NP_190658.1 UniGene:At.35444
ProteinModelPortal:Q9SVL0 SMR:Q9SVL0 IntAct:Q9SVL0 STRING:Q9SVL0
PRIDE:Q9SVL0 EnsemblPlants:AT3G50890.1 GeneID:824253
KEGG:ath:AT3G50890 TAIR:At3g50890 InParanoid:Q9SVL0 OMA:MISTEVK
PhylomeDB:Q9SVL0 ProtClustDB:CLSN2915369 ArrayExpress:Q9SVL0
Genevestigator:Q9SVL0 Uniprot:Q9SVL0
Length = 249
Score = 204 (76.9 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 41/75 (54%), Positives = 50/75 (66%)
Query: 204 KKRSRTKFTQEQKEKMLSFAERLGWKMNRAEEKLTQDFCSEVGVSRRVFKVWMHNNKNAS 263
KKR RTK +EQKEKM FAERLGW+M + +E+ FC V + R+VFKVWMHNNK A
Sbjct: 181 KKRVRTKINEEQKEKMKEFAERLGWRMQKKDEEEIDKFCRMVNLRRQVFKVWMHNNKQAM 240
Query: 264 GRKDQRSINNKNIND 278
R NN NI++
Sbjct: 241 KR------NNSNISE 249
Score = 203 (76.5 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 49/128 (38%), Positives = 68/128 (53%)
Query: 8 NTNKNPDTETESPPKIIL-PKNKKSQSFYTSSSFVPPLQMVVSYKECLKNHAASLGGHAL 66
+T+ P+ + ES P + L P K++Q T + Y+EC KNHAAS GGH +
Sbjct: 23 HTDPEPEAKPESDPSMALFPIKKENQKPKTR------VDQGAKYRECQKNHAASTGGHVV 76
Query: 67 DGCGEFMPSPTATSNDPASLNCAACGCHRNFHRRDPY-EPNAAATHRL--PPAATASHST 123
DGC EFM +L CAAC CHR+FHR++ Y N+ H+L PA +S+S+
Sbjct: 77 DGCCEFMAG--GEEGTLGALKCAACNCHRSFHRKEVYGHRNSKQDHQLMITPAFYSSNSS 134
Query: 124 DPSTVPSP 131
V P
Sbjct: 135 YKPRVMHP 142
>TAIR|locus:2026734 [details] [associations]
symbol:ZFHD1 "AT1G69600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003677 "DNA binding" evidence=ISS;IDA]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009410 "response to xenobiotic stimulus" evidence=RCA]
[GO:0048522 "positive regulation of cellular process" evidence=RCA]
InterPro:IPR009057 PROSITE:PS00027 PROSITE:PS50071 Pfam:PF04770
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC021046
IPI:IPI00536783 PIR:F96717 RefSeq:NP_177118.1 UniGene:At.50017
ProteinModelPortal:Q9SEZ1 SMR:Q9SEZ1 IntAct:Q9SEZ1 STRING:Q9SEZ1
EnsemblPlants:AT1G69600.1 GeneID:843296 KEGG:ath:AT1G69600
TAIR:At1g69600 eggNOG:NOG276809 HOGENOM:HOG000238105
InParanoid:Q9SEZ1 OMA:INGCDEK PhylomeDB:Q9SEZ1
ProtClustDB:CLSN2682563 Genevestigator:Q9SEZ1 InterPro:IPR006455
InterPro:IPR006456 ProDom:PD125774 TIGRFAMs:TIGR01565
TIGRFAMs:TIGR01566 PROSITE:PS51523 Uniprot:Q9SEZ1
Length = 242
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 80/130 (61%), Positives = 91/130 (70%)
Query: 45 QMVVSYKECLKNHAASLGGHALDGCGEFMPSPTATSNDPASLNCAACGCHRNFHRRDPYE 104
+M V YKECLKNHAA+LGGHALDGCGEFMPSPTATS DP+SL CAACGCHRNFHRRDP E
Sbjct: 26 EMGVCYKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSLRCAACGCHRNFHRRDPSE 85
Query: 105 PNAAATHRLPPAATASHSTDPSTVPSPDTNTNSPQHHQPVTSPTPCSYYSSAP--HMLLA 162
T PP ++ PS SP P H V+SP PCSYY+SAP H++L+
Sbjct: 86 NLNFLT--APPISS------PSGTESP------PSRH--VSSPVPCSYYTSAPPHHVILS 129
Query: 163 LSTGFSAPPD 172
LS+GF P D
Sbjct: 130 LSSGFPGPSD 139
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 80/198 (40%), Positives = 108/198 (54%)
Query: 111 HRLPPAATASHSTDPSTVPSPDTNTNSPQHHQPVTSPTPCSYYSSAP--HMLLALSTGFS 168
HR P+ + T P + SP + P H V+SP PCSYY+SAP H++L+LS+GF
Sbjct: 79 HRRDPSENLNFLTAPP-ISSPSGTESPPSRH--VSSPVPCSYYTSAPPHHVILSLSSGFP 135
Query: 169 APPDDGDDNXXXXXXXXXXXXXFNQVLAANSSDNG-KKRSRTKFTQEQKEKMLSFAERLG 227
P D D V + NSS +KR+RTKFT EQK KM +FAE+ G
Sbjct: 136 GPSDQ-DPTV---------------VRSENSSRGAMRKRTRTKFTPEQKIKMRAFAEKAG 179
Query: 228 WKMNRAEEKLTQDFCSEVGVSRRVFKVWMHNNKNASGRKDQRSINNKNINDIVNGCSRVS 287
WK+N +EK ++FC+EVG+ R V KVWMHNNK S+ N I +I +G
Sbjct: 180 WKINGCDEKSVREFCNEVGIERGVLKVWMHNNKY--------SLLNGKIREIEHGLC--- 228
Query: 288 FDVNGNCKNHNDGNGNGS 305
+N + NDG+G+ S
Sbjct: 229 --LN---THSNDGDGSSS 241
>TAIR|locus:2062141 [details] [associations]
symbol:HB24 "AT2G18350" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR009057
Pfam:PF04770 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC006439
HOGENOM:HOG000238105 InterPro:IPR006455 InterPro:IPR006456
ProDom:PD125774 TIGRFAMs:TIGR01565 TIGRFAMs:TIGR01566
PROSITE:PS51523 UniGene:At.40008 EMBL:AY088255 IPI:IPI00539285
PIR:C84563 RefSeq:NP_565436.1 ProteinModelPortal:Q9ZPW7 SMR:Q9ZPW7
IntAct:Q9ZPW7 STRING:Q9ZPW7 EnsemblPlants:AT2G18350.1 GeneID:816350
KEGG:ath:AT2G18350 TAIR:At2g18350 eggNOG:NOG252042
InParanoid:Q9ZPW7 OMA:KARYREC PhylomeDB:Q9ZPW7
ProtClustDB:CLSN2914944 ArrayExpress:Q9ZPW7 Genevestigator:Q9ZPW7
Uniprot:Q9ZPW7
Length = 262
Score = 219 (82.2 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 38/64 (59%), Positives = 49/64 (76%)
Query: 204 KKRSRTKFTQEQKEKMLSFAERLGWKMNRAEEKLTQDFCSEVGVSRRVFKVWMHNNKNAS 263
KKR RTKF +EQKEKM+ FAE++GW+M + E+ FC E+ V R+VFKVWMHNNK A+
Sbjct: 198 KKRFRTKFNEEQKEKMMEFAEKIGWRMTKLEDDEVNRFCREIKVKRQVFKVWMHNNKQAA 257
Query: 264 GRKD 267
+KD
Sbjct: 258 KKKD 261
Score = 179 (68.1 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 4 TNNINTNKNPDTETESPPKIILPKNKKSQSFYTSSSFVPPLQMVVSYKECLKNHAASLGG 63
T ++ +PD + ++ P I + +S Y P + Y+EC KNHAAS GG
Sbjct: 42 TKRNGSDPDPDPDLDTNP-ISISHAPRS---YARPQTTSPGK--ARYRECQKNHAASSGG 95
Query: 64 HALDGCGEFMPSPTATSNDPASLNCAACGCHRNFHRRD 101
H +DGCGEFM S SL CAAC CHR+FHR++
Sbjct: 96 HVVDGCGEFMSS--GEEGTVESLLCAACDCHRSFHRKE 131
Score = 58 (25.5 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 98 HRRDPYEPNAAATHRLPPAATASHSTDPSTVPSPDTN----TNSPQHH-QP-VTSPTPCS 151
HR PY + A P T + +DP P DTN +++P+ + +P TSP
Sbjct: 24 HRLPPYTYSQTANKEKP--TTKRNGSDPDPDPDLDTNPISISHAPRSYARPQTTSPGKAR 81
Query: 152 Y 152
Y
Sbjct: 82 Y 82
>TAIR|locus:2165502 [details] [associations]
symbol:HB27 "AT5G42780" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR009057
Pfam:PF04770 EMBL:CP002688 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AB007647 InterPro:IPR006455 InterPro:IPR006456
ProDom:PD125774 TIGRFAMs:TIGR01565 TIGRFAMs:TIGR01566
PROSITE:PS51523 EMBL:BT002832 EMBL:BT004379 IPI:IPI00545267
RefSeq:NP_199092.1 UniGene:At.30152 ProteinModelPortal:Q9FMY7
SMR:Q9FMY7 IntAct:Q9FMY7 STRING:Q9FMY7 PRIDE:Q9FMY7
EnsemblPlants:AT5G42780.1 GeneID:834288 KEGG:ath:AT5G42780
InParanoid:Q9FMY7 OMA:VEEFCVE ProtClustDB:CLSN2916358
ArrayExpress:Q9FMY7 Genevestigator:Q9FMY7 Uniprot:Q9FMY7
Length = 242
Score = 178 (67.7 bits), Expect = 7.0e-29, Sum P(2) = 7.0e-29
Identities = 34/61 (55%), Positives = 39/61 (63%)
Query: 50 YKECLKNHAASLGGHALDGCGEFMPSPTATSNDPASLNCAACGCHRNFHRRDPYEPNAAA 109
Y EC KNHAA +G A DGCGEF+ S + + SLNCAACGCHRNFHR + N
Sbjct: 64 YYECRKNHAADIGTTAYDGCGEFVSS----TGEEDSLNCAACGCHRNFHREELIPENGGV 119
Query: 110 T 110
T
Sbjct: 120 T 120
Score = 163 (62.4 bits), Expect = 7.0e-29, Sum P(2) = 7.0e-29
Identities = 27/57 (47%), Positives = 43/57 (75%)
Query: 205 KRSRTKFTQEQKEKMLSFAERLGWKMNRAEEKLTQDFCSEVGVSRRVFKVWMHNNKN 261
KR +TKFT EQ EKM +AE+L WK+ ++ ++FC E+GV+R+ F++WM+N+K+
Sbjct: 180 KRLKTKFTAEQTEKMRDYAEKLRWKVRPERQEEVEEFCVEIGVNRKNFRIWMNNHKD 236
Score = 38 (18.4 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 88 CAACGCHRNFHRRDPYEPNAAATHRLPP 115
C G H ++ +P TH PP
Sbjct: 22 CRETGDHVHYLPTCKTKPKPTRTHHAPP 49
>TAIR|locus:2150871 [details] [associations]
symbol:HB30 "AT5G15210" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR009057 Pfam:PF04770
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL353993
HOGENOM:HOG000238105 InterPro:IPR006455 InterPro:IPR006456
ProDom:PD125774 TIGRFAMs:TIGR01565 TIGRFAMs:TIGR01566
PROSITE:PS51523 EMBL:BT012195 IPI:IPI00544446 PIR:T49956
RefSeq:NP_197025.1 UniGene:At.27604 SMR:Q9LXG0 IntAct:Q9LXG0
STRING:Q9LXG0 EnsemblPlants:AT5G15210.1 GeneID:831373
KEGG:ath:AT5G15210 TAIR:At5g15210 eggNOG:NOG299019
InParanoid:Q9LXG0 OMA:KEKMFEF ProtClustDB:CLSN2916847
Genevestigator:Q9LXG0 Uniprot:Q9LXG0
Length = 271
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 75/163 (46%), Positives = 92/163 (56%)
Query: 10 NKNPDTETE---SPPKIILPKN-KKSQSFYTSSSFVPPLQMVVSYKECLKNHAASLGGHA 65
++ P+ E P K I N K+ + +S V V +YKECLKNHAA +GGHA
Sbjct: 16 SRQPEIEAPIRIQPAKPISFSNGKRCHHHHLASEAVA----VATYKECLKNHAAGIGGHA 71
Query: 66 LDGCGEFMPSPTATSNDPASLNCAACGCHRNFHRRDPYEPNAAATHRLPPAATASHSTDP 125
LDGCGEFMPSP+ SNDPASL CAACGCHRNFHRR+ +P++ + +P H+
Sbjct: 72 LDGCGEFMPSPSFNSNDPASLTCAACGCHRNFHRREE-DPSSLSAI-VPAIEFRPHNRHQ 129
Query: 126 STVPSPD--TNTNSPQHHQPVTSPTPCSYYSSAPHMLLALSTG 166
P P SP SP P S SS +MLLALS G
Sbjct: 130 LPPPPPPHLAGIRSPDDDDSA-SPPPIS--SS--YMLLALSGG 167
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 78/247 (31%), Positives = 111/247 (44%)
Query: 51 KECLKNHAASLGGHALDGCGEFMPSPTATSNDPASLNCAACGCHRNFHRRDPYEPNAAAT 110
K C +H AS A+ E + + A A C +F+ DP AA
Sbjct: 39 KRCHHHHLAS-EAVAVATYKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAAC 97
Query: 111 --HRLPPAATASHSTDPSTVPSPDTNTNSPQHHQPVTSPTPCSYYSSAPHMLLALSTGFS 168
HR S+ + VP+ + ++ +H P P P PH+ G
Sbjct: 98 GCHRNFHRREEDPSSLSAIVPAIEFRPHN-RHQLP---PPP------PPHL-----AGIR 142
Query: 169 APPDDGDDNXXXXXXXXXXXXXFNQVLAANSS-DNGKKRSRTKFTQEQKEKMLSFAERLG 227
+P DD + AN++ +KR RTKF+Q QKEKM F+ER+G
Sbjct: 143 SPDDDDSASPPPISSSYMLLALSGGRGGANTAVPMSRKRFRTKFSQYQKEKMFEFSERVG 202
Query: 228 WKMNRAEEKLTQDFCSEVGVSRRVFKVWMHNNKNASGRKDQRSINNKNINDIVNGCSRVS 287
W+M +A++ + ++FC E+GV + VFKVWMHNNK SGR R N + V G SR S
Sbjct: 203 WRMPKADDVVVKEFCREIGVDKSVFKVWMHNNK-ISGRSGARRANGGVVVGGV-GDSRQS 260
Query: 288 F-DVNGN 293
NG+
Sbjct: 261 VVPTNGS 267
>TAIR|locus:505006123 [details] [associations]
symbol:HB32 "AT1G14687" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR009057
Pfam:PF04770 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC006917
HOGENOM:HOG000238105 InterPro:IPR006455 InterPro:IPR006456
ProDom:PD125774 TIGRFAMs:TIGR01565 TIGRFAMs:TIGR01566
PROSITE:PS51523 EMBL:AY086523 EMBL:BT003942 EMBL:BT005027
IPI:IPI00528506 RefSeq:NP_563956.1 UniGene:At.41958
UniGene:At.74098 ProteinModelPortal:Q9LQW3 SMR:Q9LQW3 IntAct:Q9LQW3
STRING:Q9LQW3 EnsemblPlants:AT1G14687.1 GeneID:838033
KEGG:ath:AT1G14687 TAIR:At1g14687 eggNOG:NOG323861
InParanoid:Q9LQW3 OMA:SYHRRID PhylomeDB:Q9LQW3
ProtClustDB:CLSN2917007 ArrayExpress:Q9LQW3 Genevestigator:Q9LQW3
Uniprot:Q9LQW3
Length = 168
Score = 147 (56.8 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 44 LQMVVSYKECLKNHAASLGGHALDGCGEFMPSPTATSNDPASLNCAACGCHRNFHRR 100
+Q Y+EC++NHAA LG +A+DGC E+ S +T + L C ACGCHR++HRR
Sbjct: 1 MQSTCVYRECMRNHAAKLGSYAIDGCREY--SQPSTGD----L-CVACGCHRSYHRR 50
Score = 133 (51.9 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 204 KKRSRTKFTQEQKEKMLSFAERLGW--KMNRAEEKLTQDFCSEVGVSRRVFKVWMHNNK 260
++R ++KFT EQ+E M +A +LGW K RA + + FC +GV+R FK W++NNK
Sbjct: 106 QRRRKSKFTAEQREAMKDYAAKLGWTLKDKRALREEIRVFCEGIGVTRYHFKTWVNNNK 164
>TAIR|locus:2168240 [details] [associations]
symbol:HB25 "AT5G65410" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR007087 InterPro:IPR009057 PROSITE:PS00027
PROSITE:PS50071 Pfam:PF04770 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AB011479 HOGENOM:HOG000238105 InterPro:IPR006455
InterPro:IPR006456 ProDom:PD125774 TIGRFAMs:TIGR01565
TIGRFAMs:TIGR01566 PROSITE:PS51523 EMBL:BT002385 EMBL:BT006304
IPI:IPI00538649 RefSeq:NP_201344.1 UniGene:At.43744 PDB:1WH5
PDBsum:1WH5 ProteinModelPortal:Q9FKP8 SMR:Q9FKP8 IntAct:Q9FKP8
MINT:MINT-1366403 STRING:Q9FKP8 PRIDE:Q9FKP8
EnsemblPlants:AT5G65410.1 GeneID:836666 KEGG:ath:AT5G65410
TAIR:At5g65410 eggNOG:NOG312041 InParanoid:Q9FKP8 OMA:STESHET
PhylomeDB:Q9FKP8 ProtClustDB:CLSN2916279 EvolutionaryTrace:Q9FKP8
Genevestigator:Q9FKP8 GermOnline:AT5G65410 Uniprot:Q9FKP8
Length = 279
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 45/102 (44%), Positives = 59/102 (57%)
Query: 50 YKECLKNHAASLGGHALDGCGEFMPSPTATSNDPASLNCAACGCHRNFHRRD-PYEPNAA 108
++ECLKN A ++GGHA+DGCGEFMP+ + D +L CAACGCHRNFHR++ PY +A
Sbjct: 75 FRECLKNQAVNIGGHAVDGCGEFMPAGIEGTID--ALKCAACGCHRNFHRKELPYFHHAP 132
Query: 109 ATHRLPPA--------ATASHSTDPSTVPSPDTNTNSPQHHQ 142
H+ PP A S+ PS P PQ +
Sbjct: 133 PQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQRER 174
Score = 211 (79.3 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 46/131 (35%), Positives = 67/131 (51%)
Query: 136 NSPQHHQPVTSPTPCSYYSSAPHMLLALSTGFSAPPDDGDDNXXXXXXXXXXXXXFNQVL 195
++P HQP P P +Y L + PP
Sbjct: 130 HAPPQHQP--PPPPPGFYR------LPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMET 181
Query: 196 AANSSDNG-KKRSRTKFTQEQKEKMLSFAERLGWKMNRAEEKLTQDFCSEVGVSRRVFKV 254
++ + G +KR RTKFT EQKE+ML+ AER+GW++ R ++++ Q FC E GV R+V KV
Sbjct: 182 SSAEAGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQDDEVIQRFCQETGVPRQVLKV 241
Query: 255 WMHNNKNASGR 265
W+HNNK+ G+
Sbjct: 242 WLHNNKHTLGK 252
Score = 39 (18.8 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 113 LPPAATASHSTDPST 127
LP A+T SH T +T
Sbjct: 40 LPKASTESHETTGTT 54
>TAIR|locus:4010713452 [details] [associations]
symbol:MIF3 "mini zinc finger 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0048509 "regulation of meristem development" evidence=IMP]
Pfam:PF04770 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0048509
InterPro:IPR006456 ProDom:PD125774 TIGRFAMs:TIGR01566
PROSITE:PS51523 EMBL:DQ217608 IPI:IPI00735059 RefSeq:NP_001077560.1
UniGene:At.68065 EnsemblPlants:AT1G18835.1 GeneID:5007704
KEGG:ath:AT1G18835 TAIR:At1g18835 eggNOG:NOG247086
HOGENOM:HOG000243140 OMA:YSPPNAN PhylomeDB:Q2Q493
ProtClustDB:CLSN2689199 Genevestigator:Q2Q493 Uniprot:Q2Q493
Length = 88
Score = 190 (71.9 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 42/78 (53%), Positives = 51/78 (65%)
Query: 24 ILPKNKKSQSFYTSSSFVPPLQMVVSYKECLKNHAASLGGHALDGCGEFMPSPTATSNDP 83
++ K +KS TSSS V Y EC KNHAA++GG+A+DGC EFM A+ D
Sbjct: 6 VVIKQRKSSYTMTSSS------SNVRYVECQKNHAANIGGYAVDGCREFM----ASGGDD 55
Query: 84 ASLNCAACGCHRNFHRRD 101
A L CAACGCHRNFHRR+
Sbjct: 56 A-LTCAACGCHRNFHRRE 72
>TAIR|locus:1006230234 [details] [associations]
symbol:MIF2 "mini zinc finger 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISS] Pfam:PF04770 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 EMBL:AP000386
InterPro:IPR006456 ProDom:PD125774 TIGRFAMs:TIGR01566
PROSITE:PS51523 HOGENOM:HOG000243140 EMBL:AY086885 EMBL:BT024663
EMBL:AK221094 IPI:IPI00524925 RefSeq:NP_974373.1 UniGene:At.47938
UniGene:At.68150 PaxDb:Q9LJW5 PRIDE:Q9LJW5
EnsemblPlants:AT3G28917.1 GeneID:2745896 KEGG:ath:AT3G28917
TAIR:At3g28917 eggNOG:NOG241745 InParanoid:Q9LJW5 OMA:TEVVCDC
PhylomeDB:Q9LJW5 ProtClustDB:CLSN2681313 Genevestigator:Q9LJW5
Uniprot:Q9LJW5
Length = 100
Score = 188 (71.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 40/81 (49%), Positives = 49/81 (60%)
Query: 37 SSSFVPPLQM-VVSYKECLKNHAASLGGHALDGCGEFMPSPTATSNDPASLNCAACGCHR 95
SSS L + V Y EC KNHAA++GG+A+DGC EFM S A+L CAACGCHR
Sbjct: 19 SSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMAS-RGEEGTVAALTCAACGCHR 77
Query: 96 NFHRRDPYEPNAAATHRLPPA 116
+FHRR+ E PP+
Sbjct: 78 SFHRRE-IETEVVCDCNSPPS 97
>TAIR|locus:2019190 [details] [associations]
symbol:MIF1 "AT1G74660" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0007275
"multicellular organismal development" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0009723 "response to
ethylene stimulus" evidence=IMP] [GO:0009733 "response to auxin
stimulus" evidence=RCA;IMP] [GO:0009735 "response to cytokinin
stimulus" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA;IMP] [GO:0043392 "negative regulation of DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0048509 "regulation
of meristem development" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] [GO:0016132 "brassinosteroid
biosynthetic process" evidence=RCA] Pfam:PF04770 EMBL:CP002684
GO:GO:0009737 GO:GO:0045892 GO:GO:0009735 GO:GO:0009733
GO:GO:0003677 GO:GO:0009640 GO:GO:0009739 GO:GO:0048509
GO:GO:0009741 EMBL:AC011765 GO:GO:0043392 InterPro:IPR006456
ProDom:PD125774 TIGRFAMs:TIGR01566 PROSITE:PS51523
HOGENOM:HOG000243140 ProtClustDB:CLSN2689199 EMBL:BT024806
IPI:IPI00522381 PIR:G96775 RefSeq:NP_565088.1 UniGene:At.34853
IntAct:Q9CA51 PRIDE:Q9CA51 EnsemblPlants:AT1G74660.1 GeneID:843805
KEGG:ath:AT1G74660 TAIR:At1g74660 InParanoid:Q9CA51 OMA:EISNVRY
PhylomeDB:Q9CA51 Genevestigator:Q9CA51 Uniprot:Q9CA51
Length = 102
Score = 186 (70.5 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 36/77 (46%), Positives = 51/77 (66%)
Query: 27 KNKKSQSFYTSSSFVPPLQMV--VSYKECLKNHAASLGGHALDGCGEFMPSPTATSNDPA 84
+N + S +T++S + V Y EC KNHAA++GG+A+DGC EFM + + D
Sbjct: 14 RNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCREFMAAGVEGTVD-- 71
Query: 85 SLNCAACGCHRNFHRRD 101
+L CAACGCHRNFHR++
Sbjct: 72 ALRCAACGCHRNFHRKE 88
>MGI|MGI:96176 [details] [associations]
symbol:Hoxa4 "homeobox A4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96176 GO:GO:0005634
GO:GO:0009952 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849 CTD:3201
eggNOG:NOG257177 OrthoDB:EOG4GTKF7 EMBL:S70444 EMBL:S67058
EMBL:AK076098 EMBL:X66861 EMBL:X13538 EMBL:X17346 EMBL:M27432
EMBL:M13813 IPI:IPI00128156 PIR:A43556 RefSeq:NP_032291.1
UniGene:Mm.439647 ProteinModelPortal:P06798 SMR:P06798
STRING:P06798 PhosphoSite:P06798 PRIDE:P06798
Ensembl:ENSMUST00000101395 GeneID:15401 KEGG:mmu:15401
UCSC:uc009byf.1 InParanoid:P06798 NextBio:288098 Bgee:P06798
CleanEx:MM_HOXA4 Genevestigator:P06798
GermOnline:ENSMUSG00000000942 Uniprot:P06798
Length = 285
Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
Identities = 66/254 (25%), Positives = 97/254 (38%)
Query: 33 SFYTSSSFVPPLQMVVSYKECLKNHAASLGGHALDGCGEFMPSPTATSNDPASLNCAACG 92
SF +S+++ P ++E H GG G G P P + + PA N A
Sbjct: 5 SFLINSNYIEP--KFPPFEE-FAPHGGPGGGDGAVGGGPGYPRPQSAPHLPAP-NPHAAR 60
Query: 93 CHRNFHRRDPYEPNAAATHRLPPAATASHSTDPSTVPSPDTNTNSPQHHQPVTSP-TPCS 151
++ EP+ PAA ++ ++ P+ + H P P P
Sbjct: 61 QPPAYYAPRAREPSYPGGLYPAPAAACPYACRGASPGRPEQSPAPGAHPSPAPQPPVPLG 120
Query: 152 YYSSAPHMLLALSTGFSAP--P----DDGDDNXXXXXXXXXXXXXFNQVLAANSSDNG-- 203
+ + P A++TG SAP P D G V A NSS NG
Sbjct: 121 HCAPGP-TTPAVATGGSAPACPLLLADQGPAGPKGKEPVVYPWMKKIHVSAVNSSYNGGE 179
Query: 204 KKRSRTKFTQEQK---EKMLSFAERLGWKMNRAEEKLTQDFCSEVGVSRRVFKVWMHNNK 260
KRSRT +T++Q EK F L + R E + C +S R K+W N +
Sbjct: 180 PKRSRTAYTRQQVLELEKEFHFNRYLT-RRRRIE--IAHTLC----LSERQVKIWFQNRR 232
Query: 261 NASGRKDQRSINNK 274
+KD + N K
Sbjct: 233 -MKWKKDHKLPNTK 245
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.126 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 314 301 0.00096 115 3 11 23 0.48 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 613 (65 KB)
Total size of DFA: 232 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.02u 0.22s 37.24t Elapsed: 00:00:01
Total cpu time: 37.02u 0.22s 37.24t Elapsed: 00:00:01
Start: Sat May 11 10:05:52 2013 End: Sat May 11 10:05:53 2013