Your job contains 1 sequence.
>046397
MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI
ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD
RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT
VINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAV
EDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDIN
SLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITIN
DVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCVYD
AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALD
HNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLA
EAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSL
LKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYS
NSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGG
YLEFFMNPSVADMYQCIRRELDELIQNKLLNPRLNIHTHEDLLAAVRLLVAEDQCEGRFI
FGHQVFKPSKPSVVGAQPAFISRTESGPGGDNSKSQLQTLLTRAGYAAPSYRTKQLKNGQ
FRSTVEFNGMEIMGQPCNNKKNAEKDAAAEALQWIMGGIKTSEECINHMSILLKRSKKDH
S
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046397
(901 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2038796 - symbol:AT2G01130 species:3702 "Arabi... 3554 0. 1
TAIR|locus:2008144 - symbol:AT1G48650 species:3702 "Arabi... 3268 0. 1
TAIR|locus:504954904 - symbol:ABO6 "ABA overly sensitive ... 2965 4.7e-309 1
TAIR|locus:2039280 - symbol:AT2G35920 species:3702 "Arabi... 2047 8.9e-212 1
MGI|MGI:1919412 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) bo... 1549 5.3e-159 1
UNIPROTKB|F6V8H1 - symbol:DHX36 "Uncharacterized protein"... 1546 1.1e-158 1
UNIPROTKB|Q05B79 - symbol:DHX36 "Uncharacterized protein"... 1537 9.9e-158 1
RGD|1308767 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box po... 1536 1.3e-157 1
UNIPROTKB|Q9H2U1 - symbol:DHX36 "Probable ATP-dependent R... 1525 1.8e-156 1
UNIPROTKB|E1C550 - symbol:DHX36 "Uncharacterized protein"... 1515 2.1e-155 1
UNIPROTKB|E2QTL7 - symbol:DHX36 "Uncharacterized protein"... 1493 4.5e-153 1
ZFIN|ZDB-GENE-050419-20 - symbol:si:dkey-119o24.1 "si:dke... 1491 7.4e-153 1
UNIPROTKB|F5GZS0 - symbol:DHX36 "Probable ATP-dependent R... 1484 4.1e-152 1
TAIR|locus:2196265 - symbol:AT1G58060 species:3702 "Arabi... 766 1.0e-147 3
UNIPROTKB|E1C9G0 - symbol:DHX57 "Uncharacterized protein"... 653 2.3e-143 4
UNIPROTKB|E7EWK3 - symbol:DHX36 "Probable ATP-dependent R... 1398 5.3e-143 1
UNIPROTKB|E2QX71 - symbol:DHX57 "Uncharacterized protein"... 645 5.8e-143 4
ZFIN|ZDB-GENE-030131-4078 - symbol:dhx57 "DEAH (Asp-Glu-A... 676 1.4e-140 4
UNIPROTKB|F1N1A2 - symbol:DHX57 "Uncharacterized protein"... 641 1.3e-139 4
UNIPROTKB|Q6P158 - symbol:DHX57 "Putative ATP-dependent R... 634 5.9e-138 4
UNIPROTKB|F1M8G5 - symbol:Dhx57 "Protein Dhx57" species:1... 631 7.5e-136 4
MGI|MGI:2147067 - symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His... 634 7.5e-136 4
UNIPROTKB|F1LSC4 - symbol:Dhx57 "Protein Dhx57" species:1... 631 1.1e-135 4
TAIR|locus:2052841 - symbol:HVT1 "helicase in vascular ti... 758 3.8e-135 2
MGI|MGI:2145374 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) bo... 1302 7.9e-133 1
UNIPROTKB|E1B9N7 - symbol:DHX29 "Uncharacterized protein"... 1295 4.4e-132 1
UNIPROTKB|E2RID8 - symbol:DHX29 "Uncharacterized protein"... 1295 4.4e-132 1
TAIR|locus:2009200 - symbol:NIH "nuclear DEIH-boxhelicase... 729 5.4e-131 2
RGD|2318361 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box po... 1284 6.4e-131 1
UNIPROTKB|E1C388 - symbol:DHX29 "Uncharacterized protein"... 1280 1.7e-130 1
UNIPROTKB|Q7Z478 - symbol:DHX29 "ATP-dependent RNA helica... 1279 2.2e-130 1
FB|FBgn0002774 - symbol:mle "maleless" species:7227 "Dros... 1247 5.3e-127 1
MGI|MGI:2448561 - symbol:Ythdc2 "YTH domain containing 2"... 723 2.1e-126 3
UNIPROTKB|Q9H6S0 - symbol:YTHDC2 "Probable ATP-dependent ... 715 9.9e-125 3
UNIPROTKB|F1MNU7 - symbol:YTHDC2 "Uncharacterized protein... 707 2.2e-124 3
UNIPROTKB|J9PAM3 - symbol:YTHDC2 "Uncharacterized protein... 710 2.6e-124 2
TAIR|locus:2196255 - symbol:AT1G58050 species:3702 "Arabi... 1069 4.5e-124 2
UNIPROTKB|F1N0J0 - symbol:DHX30 "Putative ATP-dependent R... 683 1.8e-123 2
RGD|1308888 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box po... 677 2.1e-123 2
UNIPROTKB|Q5BJS0 - symbol:Dhx30 "Putative ATP-dependent R... 677 2.1e-123 2
MGI|MGI:1920081 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) bo... 677 2.4e-123 2
UNIPROTKB|D4A1V3 - symbol:Dhx30 "Putative ATP-dependent R... 677 2.5e-123 2
UNIPROTKB|F1SLI4 - symbol:DHX30 "Uncharacterized protein"... 679 4.0e-123 2
UNIPROTKB|J9P3P6 - symbol:DHX30 "Uncharacterized protein"... 677 4.3e-123 2
UNIPROTKB|H7BXY3 - symbol:DHX30 "Putative ATP-dependent R... 677 4.4e-123 2
UNIPROTKB|Q7L2E3 - symbol:DHX30 "Putative ATP-dependent R... 677 5.5e-123 2
UNIPROTKB|E2RL62 - symbol:DHX30 "Uncharacterized protein"... 677 8.5e-123 2
UNIPROTKB|Q5R607 - symbol:DHX30 "Putative ATP-dependent R... 675 9.1e-123 2
UNIPROTKB|Q2NKY8 - symbol:DHX30 "Putative ATP-dependent R... 683 1.0e-122 2
UNIPROTKB|J9P264 - symbol:DHX30 "Uncharacterized protein"... 671 3.8e-122 2
UNIPROTKB|F1NS70 - symbol:YTHDC2 "Uncharacterized protein... 674 3.0e-121 3
UNIPROTKB|E2QZR7 - symbol:YTHDC2 "Uncharacterized protein... 703 6.3e-121 2
UNIPROTKB|I3LHZ6 - symbol:DHX9 "Uncharacterized protein" ... 662 8.1e-121 2
UNIPROTKB|Q5ZI74 - symbol:DHX30 "Putative ATP-dependent R... 659 1.7e-120 2
FB|FBgn0032883 - symbol:CG9323 species:7227 "Drosophila m... 1184 2.5e-120 1
ZFIN|ZDB-GENE-070912-171 - symbol:dhx9 "DEAH (Asp-Glu-Ala... 695 5.5e-120 2
UNIPROTKB|F1P1F4 - symbol:DHX30 "Putative ATP-dependent R... 659 9.4e-120 2
UNIPROTKB|G4MR96 - symbol:MGG_04709 "Uncharacterized prot... 1094 6.8e-117 2
DICTYBASE|DDB_G0267516 - symbol:dhx57 "RWD domain-contain... 1023 5.1e-116 3
UNIPROTKB|J9P6V4 - symbol:DHX29 "Uncharacterized protein"... 1108 2.9e-112 1
UNIPROTKB|F1SLN0 - symbol:DHX29 "Uncharacterized protein"... 1103 9.7e-112 1
UNIPROTKB|I3LQ47 - symbol:DHX29 "Uncharacterized protein"... 1086 6.1e-110 1
DICTYBASE|DDB_G0275313 - symbol:dhx9 "ATP-dependent RNA h... 513 9.5e-110 3
UNIPROTKB|I3LG95 - symbol:DHX29 "Uncharacterized protein"... 1077 5.5e-109 1
FB|FBgn0030246 - symbol:CG1582 species:7227 "Drosophila m... 893 7.8e-109 3
WB|WBGene00004355 - symbol:rha-1 species:6239 "Caenorhabd... 1075 9.0e-109 1
ASPGD|ASPL0000008624 - symbol:AN5839 species:162425 "Emer... 1027 1.1e-105 2
UNIPROTKB|G4MZR9 - symbol:MGG_07059 "Pre-mRNA-splicing fa... 571 6.3e-100 3
UNIPROTKB|F1RLG0 - symbol:YTHDC2 "Uncharacterized protein... 712 3.5e-99 3
POMBASE|SPBC15C4.05 - symbol:SPBC15C4.05 "ATP-dependent R... 924 3.8e-96 2
UNIPROTKB|H7C109 - symbol:DHX57 "Putative ATP-dependent R... 734 7.9e-93 2
ZFIN|ZDB-GENE-061207-30 - symbol:dhx34 "DEAH (Asp-Glu-Ala... 562 1.5e-91 2
FB|FBgn0030833 - symbol:CG8915 species:7227 "Drosophila m... 502 8.2e-91 2
UNIPROTKB|G5E5N3 - symbol:DHX9 "ATP-dependent RNA helicas... 887 5.0e-90 2
UNIPROTKB|Q28141 - symbol:DHX9 "ATP-dependent RNA helicas... 887 5.0e-90 2
CGD|CAL0005664 - symbol:orf19.6818 species:5476 "Candida ... 528 1.0e-89 3
UNIPROTKB|Q5ADM3 - symbol:CaO19.14110 "Putative uncharact... 528 1.0e-89 3
UNIPROTKB|Q5R874 - symbol:DHX9 "ATP-dependent RNA helicas... 883 1.2e-89 2
UNIPROTKB|Q08211 - symbol:DHX9 "ATP-dependent RNA helicas... 883 1.3e-89 2
UNIPROTKB|E2RNT3 - symbol:DHX9 "Uncharacterized protein" ... 886 2.1e-88 1
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 488 3.9e-88 2
MGI|MGI:1918973 - symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) bo... 539 8.1e-88 2
RGD|1308548 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box pol... 877 8.6e-88 1
UNIPROTKB|Q14147 - symbol:DHX34 "Probable ATP-dependent R... 536 3.7e-87 2
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 521 3.8e-87 2
UNIPROTKB|E1BJ90 - symbol:DHX34 "Uncharacterized protein"... 531 8.8e-87 2
UNIPROTKB|E2RTK4 - symbol:DHX34 "Uncharacterized protein"... 525 1.3e-86 2
UNIPROTKB|E2RTK2 - symbol:DHX34 "Uncharacterized protein"... 525 1.5e-86 2
MGI|MGI:108177 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box ... 869 3.7e-86 1
UNIPROTKB|Q68FK8 - symbol:dhx9 "ATP-dependent RNA helicas... 864 5.5e-86 1
WB|WBGene00009922 - symbol:F52B5.3 species:6239 "Caenorha... 506 8.9e-86 3
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 520 1.0e-85 2
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 504 3.9e-85 2
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 476 6.6e-85 2
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 486 7.9e-85 2
UNIPROTKB|F1RLY9 - symbol:DHX34 "Uncharacterized protein"... 510 1.8e-84 2
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 473 2.4e-84 2
SGD|S000004411 - symbol:YLR419W "Putative helicase with l... 448 3.8e-84 3
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 506 5.4e-84 2
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 506 5.4e-84 2
WARNING: Descriptions of 216 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 3554 (1256.1 bits), Expect = 0., P = 0.
Identities = 668/900 (74%), Positives = 769/900 (85%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
ML+ R +LPA+K+++ +LTAISQNQV++ISGETGCGKTTQ+PQFILESEI + RGA SI
Sbjct: 213 MLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSI 272
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
ICTQPRRISAMSVSERVA ERGE+LGESVGYKVRLEG+KGRDTRLLFCTTGILLRRLLVD
Sbjct: 273 ICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVD 332
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
RNL+GVTHVIVDE+HERGMNEDFLLI+LKDLLSRR EL+L+LMSATLDAELFSSYFGGA
Sbjct: 333 RNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAG 392
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAV 240
VI IPGFTYPVR+HFLEDIL+MT YRLTPYNQIDDYGQE+ WKM+KQ P+KRKSQI V
Sbjct: 393 VIYIPGFTYPVRSHFLEDILEMTRYRLTPYNQIDDYGQERTWKMNKQIPKKRKSQITFVV 452
Query: 241 EDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDIN 300
ED L+AA+F E+S +TRESLSCW PDCIGFNLIE++LC ICE E PG +L+F+TGWDDI+
Sbjct: 453 EDALRAADFKEFSPETRESLSCWYPDCIGFNLIEFLLCNICENEGPGGILIFLTGWDDIS 512
Query: 301 SLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITIN 360
SL +KLQ + I G+P V+LL CHGSM + EQRLIF+EP SGVRKIVLATNIAETSITIN
Sbjct: 513 SLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITIN 572
Query: 361 DVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYD 420
DV FVIDCGKAKETSYDALNNT CLLPSWIS VS V+PG+CY LYP+CVYD
Sbjct: 573 DVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYD 632
Query: 421 AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALD 480
AFAEYQLPEILRTPL SLCLQIKSL LG+I+ FLSRALQSPELLAVQ AI +LKIIGALD
Sbjct: 633 AFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQSPELLAVQKAIAFLKIIGALD 692
Query: 481 HNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLA 540
NE+LT LG+YL+ LPMEPKLGKMLILGAI CL+P+LT+ AGLSVRDPFL P DKKDLA
Sbjct: 693 ENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAGLSVRDPFLTPQDKKDLA 752
Query: 541 EAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSL 600
EAAKSQFS D+SDHLALVRA+EGWK AE A Y+YCWKNFLS S++ IDSLRKEF SL
Sbjct: 753 EAAKSQFSRDHSDHLALVRAYEGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSL 812
Query: 601 LKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYS 660
LKDTGL+D + SICN+ G D RAVICYG+YPGI S+V N +S SLKTMEDGQV LYS
Sbjct: 813 LKDTGLIDGNPSICNSEGNDANLTRAVICYGMYPGICSVVHNERSFSLKTMEDGQVLLYS 872
Query: 661 NSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGG 720
NS NARE++IPYPWLVFNEK+KVNSVFL+DSTA SDS L+LFGGSIS+G+ DGHLKM+GG
Sbjct: 873 NSENARETKIPYPWLVFNEKIKVNSVFLRDSTACSDSTLILFGGSISKGDTDGHLKMLGG 932
Query: 721 YLEFFMNPSVADMYQCIRRELDELIQNKLLNPRLNIHTHEDLLAAVRLLVAEDQCEGRFI 780
YLEFFM P VA++YQ +++ELDELIQNKLLNP++++ H +LL+A+RLLV+ED C+GRF+
Sbjct: 933 YLEFFMKPDVAEIYQTLKKELDELIQNKLLNPKVDMQAHRELLSAIRLLVSEDGCDGRFV 992
Query: 781 FGHQVFKPSKPSVVGAQPAFISRTESGPGGDNSKSQLQTLLTRAGYAAPSYRTKQLKNGQ 840
FGHQ+ +P + S + +P+ SRTESGPGGDNSKSQLQT+LTRAGY P Y+TKQLKN +
Sbjct: 993 FGHQILRPLEISALSTKPSLFSRTESGPGGDNSKSQLQTILTRAGYTVPMYKTKQLKNNK 1052
Query: 841 FRSTVEFNGMEIMGQPCXXXXXXXXXXXXXXLQWIMGGIKTSEECINHMSILLKRSKKDH 900
F++TVEFN +IMGQPC +QW+ GG K S E +NHMS LLK+ KKDH
Sbjct: 1053 FQTTVEFNETQIMGQPCSNKKSAEKDAAAEAIQWLKGGAKESHEQVNHMSKLLKKGKKDH 1112
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 3268 (1155.5 bits), Expect = 0., P = 0.
Identities = 623/903 (68%), Positives = 745/903 (82%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M+ FR+ LPAYKEK+ LL AI+ NQVV++SGETGCGKTTQ+PQ+ILESEI + RGA CSI
Sbjct: 292 MVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSI 351
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
ICTQPRRISA+SVSERVA+ERGE++GESVGYKVRLEGM+GRDTRLLFCTTG+LLRRLLVD
Sbjct: 352 ICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVD 411
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
R+LKGVTHV+VDE+HERGMNEDFLLIVLKDLL RRP+L+L+LMSATL+AELFSSYFGGA
Sbjct: 412 RSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAP 471
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAP-RKRKSQIASA 239
++IPGFTYPVR HFLED L+ +GYRLT YNQIDDYG+EK WKM KQA +KRKS I+SA
Sbjct: 472 AMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFKKRKSLISSA 531
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDI 299
VED L+AA+F Y+ +TR+SLSCW+PD IGFNLIE VLC+I + ERPGAVLVFMTGWDDI
Sbjct: 532 VEDALEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDI 591
Query: 300 NSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITI 359
NSL ++L+A+ +LGDP +VLLL CHGSMASSEQRLIFD P G+RKIVLATN+AETSITI
Sbjct: 592 NSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITI 651
Query: 360 NDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVY 419
NDVV+VIDCGKAKETSYDALNNT CLLPSWIS + V PGECY LYPRCVY
Sbjct: 652 NDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVY 711
Query: 420 DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGAL 479
+AFA+YQ PE+LRTPLQSLCLQIKSL LG+I+ FLSRALQ PE L+VQNA+EYLKIIGAL
Sbjct: 712 EAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEALSVQNAVEYLKIIGAL 771
Query: 480 DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDL 539
D +E LT LG+ L+MLP+EPKLGKMLILGAIFNCL+PV+T+VAGLSVRDPFL P DKKDL
Sbjct: 772 DDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDL 831
Query: 540 AEAAKSQFS-HDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFL 598
AE A+S+FS DYSDHL LVRA+ GWKDAER +GY+YCWKNFLS+ ++K +DS+RK+F
Sbjct: 832 AETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQFF 891
Query: 599 SLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFL 658
+LLK+ L+D + C+ DE +RA+IC G++PG+ S+V KS +LKTMEDGQV L
Sbjct: 892 NLLKEASLID-NIEGCSKLSHDEHLVRAIICAGMFPGVCSVVNKEKSITLKTMEDGQVLL 950
Query: 659 YSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMM 718
YS+SVN IP+PWLVFN+K+KVNSVFL+DSTAVSDSVLLLFG IS G DGHLKM+
Sbjct: 951 YSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGDKISSGGFDGHLKML 1010
Query: 719 GGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPRLNIHTHEDLLAAVRLLVAEDQCEGR 778
GGYLEFFM P++A Y ++RELDELIQNKL+NP+L+I ++ L+ A+RLLV+EDQCEGR
Sbjct: 1011 GGYLEFFMKPTLAYTYLSLKRELDELIQNKLVNPKLDIQLYDKLMTAIRLLVSEDQCEGR 1070
Query: 779 FIFGHQVFKPS---KPSVVGAQPAFISRTESGPGGDNSKSQLQTLLTRAGYAAPSYRTKQ 835
F++G + P+ K VGAQ GG+N+K+QLQTLL RAG+ +P Y+T+Q
Sbjct: 1071 FVYGRKALSPTPAKKLKDVGAQL-------QNSGGENNKNQLQTLLARAGHGSPVYKTRQ 1123
Query: 836 LKNGQFRSTVEFNGMEIMGQPCXXXXXXXXXXXXXXLQWIMGGIKTSEECINHMSILLKR 895
LKN QFRS V FNG++ MG+PC L W+ G K+S +NHMS+LLK+
Sbjct: 1124 LKNNQFRSMVTFNGLDFMGKPCGSKKNAEKDAAHEALLWLQGESKSSLNDLNHMSMLLKK 1183
Query: 896 SKK 898
+KK
Sbjct: 1184 NKK 1186
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 2965 (1048.8 bits), Expect = 4.7e-309, P = 4.7e-309
Identities = 564/878 (64%), Positives = 700/878 (79%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
MLEFR+ LP++K+K RLL AI++NQV+++SGETGCGKTTQ+PQ+ILESEI S RGA C+I
Sbjct: 253 MLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNI 312
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
ICTQPRRISAM+VSERV++ERGE LGE+VG+KVRLEGM+G++T LLFCT+GILLRRLL D
Sbjct: 313 ICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSD 372
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
RNL GVTHV VDE+HERGMNEDFL+IVLK+LL RRP+LRLVLMSATL+AELFS+Y+GGA
Sbjct: 373 RNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGGAP 432
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQA-PRKRKSQIASA 239
I+IPGFT+PV+ HFLED+L++TGY+LT +NQ+DDYGQEK WK KQ PRKRK+QI +
Sbjct: 433 TIHIPGFTHPVKAHFLEDVLEITGYKLTSFNQVDDYGQEKTWKTQKQLMPRKRKNQITTL 492
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDI 299
VE+ L +NF Y+S+TR+SLS W PDCIGFNLIE VLC+IC KERPGAVLVF+TGWDDI
Sbjct: 493 VEEALSKSNFESYNSRTRDSLSSWMPDCIGFNLIEAVLCHICRKERPGAVLVFLTGWDDI 552
Query: 300 NSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITI 359
SL+D+++A+ +LGDP RVLLL CHGSMA++EQRLIF+ +RKIVLATN+AE SITI
Sbjct: 553 RSLSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERAPPNIRKIVLATNMAEASITI 612
Query: 360 NDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVY 419
NDVVFV+DCGKAKET+YDALNNT CLLPSWIS S + PGECY LYP+CVY
Sbjct: 613 NDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVY 672
Query: 420 DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGAL 479
DAFAEYQLPE+LRTPL SLCLQIKSL++ +IA FLS ALQ+PE LAVQNAI +LK+IGAL
Sbjct: 673 DAFAEYQLPELLRTPLNSLCLQIKSLQVESIAEFLSAALQAPESLAVQNAIGFLKMIGAL 732
Query: 480 DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDL 539
D E LT LG+ L++LP++PKLGKMLI+GAIF C +P+LTIV+GLSVRDPFL P DKKDL
Sbjct: 733 DEKENLTDLGKLLSILPVDPKLGKMLIMGAIFRCFDPILTIVSGLSVRDPFLLPQDKKDL 792
Query: 540 AEAAKSQFS-HDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFL 598
A +AK +FS DYSDH+ALVRAFEGWKDAER + YE+CW+NFLSA +++ I SLRK+F
Sbjct: 793 ALSAKLRFSAKDYSDHMALVRAFEGWKDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFN 852
Query: 599 SLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFL 658
+LK+ GLV D ++ N ++ +RAVIC GL+PGI+S+V S S KTM+DGQV L
Sbjct: 853 YILKEAGLVHDDLALNNKLSHNQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQVSL 912
Query: 659 YSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMM 718
Y+NSVN+R IPYPWLVF EK+KVN+V ++DST V DS L+LFGGS+S G GHLKM+
Sbjct: 913 YANSVNSRFPTIPYPWLVFGEKVKVNAVLIRDSTGVPDSSLILFGGSLSTGVQVGHLKML 972
Query: 719 GGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPRLNIHTH-EDLLAAVRLLVAEDQCEG 777
GY++FFM+P++A+ Y ++ ELD+L+Q KL +P ++IH + L+ AV+ LVA DQCEG
Sbjct: 973 DGYIDFFMDPNLAESYVKLKEELDKLLQKKLEDPSMDIHKEGKYLMLAVQELVAGDQCEG 1032
Query: 778 RFIFGHQVFKPSKPSVVGAQPAFISRTESGPGGDNSKSQLQTLLTRAGYAAPSYRTKQLK 837
RF+FG +PS+P I + G N KS LQTLL RAG++ P Y+TK LK
Sbjct: 1033 RFVFGRDTKRPSQPQ--------IGENKHSKDGTNPKSLLQTLLMRAGHSPPKYKTKHLK 1084
Query: 838 NGQFRSTVEFNGMEIMGQPCXXXXXXXXXXXXXXLQWI 875
+FR+ VEF GM+ +G+P L W+
Sbjct: 1085 TNEFRALVEFKGMQFVGKPQRNKTLAEKDAAVEALAWL 1122
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 2047 (725.6 bits), Expect = 8.9e-212, P = 8.9e-212
Identities = 388/755 (51%), Positives = 546/755 (72%)
Query: 4 FRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICT 63
FR LPA+K K L ++SQNQV+++SGETGCGKTTQ+PQFILE EI+S+RGA C+IICT
Sbjct: 224 FREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICT 283
Query: 64 QPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNL 123
QPRRISA+SV+ R+++ERGE +GESVGY++RLE + TRLLFCTTG+LLRRL+ D NL
Sbjct: 284 QPRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNL 343
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVIN 183
V+H++VDE+HERGMNEDFLLI+L+DLL RRP+LRL+LMSAT++A++FS+YFG + ++
Sbjct: 344 TNVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMH 403
Query: 184 IPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVEDT 243
IPGFT+PV FLED+L+ + Y + + + G + + ++ +K + + ED
Sbjct: 404 IPGFTFPVAELFLEDVLEKSRYNIKSSDSGNYQGSSRGRRRESES---KKDDLTTLFEDI 460
Query: 244 LKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLN 303
+++ YSS TR SL W+ I +L+E + +IC E GA+LVF+TGWD+I+ L
Sbjct: 461 DINSHYKSYSSATRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLL 520
Query: 304 DKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVV 363
+K+ N LGD ++ L+L HGSM + QR IFD P RKIVLATNIAE+SITI+DVV
Sbjct: 521 EKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVV 580
Query: 364 FVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFA 423
+V+DCGKAKETSYDALN +CLLPSWIS S VQ G CYRLYP+ +YDAF
Sbjct: 581 YVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFP 640
Query: 424 EYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNE 483
+YQLPEI+RTPLQ LCL IKSL++G+I FL++ALQ P+ LAV+NAIE LK IGAL+ E
Sbjct: 641 QYQLPEIIRTPLQELCLHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVE 700
Query: 484 ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAA 543
ELT LG++L LP++P +GKML++GAIF C+ P LTI A L+ R PF+ P+++K+ A+ A
Sbjct: 701 ELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEA 760
Query: 544 KSQFSHDY-SDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLK 602
K F+ D SDH+AL++A+EG++DA+RG ++CW+NFLS ++++++ +R +FL LL
Sbjct: 761 KRYFAGDSCSDHIALLKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLS 820
Query: 603 DTGLVD-CDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSN 661
D G VD + N + D I AV+C GLYP + + GK ++ T E G+V ++
Sbjct: 821 DIGFVDKSKPNAYNQYSYDMEMISAVLCAGLYPNVVQCKRRGKRTAFYTKELGKVDIHPG 880
Query: 662 SVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGGY 721
SVNAR + P+LV++EK+K SV+++DST +SD LL+FGG++ + ++M+GGY
Sbjct: 881 SVNARVNLFSLPYLVYSEKVKTTSVYIRDSTNISDYALLMFGGNLIPSKTGEGIEMLGGY 940
Query: 722 LEFFMNPSVADMYQCIRRELDELIQNKLLNPRLNI 756
L F + ++ ++ Q +R E+D+L+ K+ +P L+I
Sbjct: 941 LHFSASKNILELIQRLRGEVDKLLNKKIEDPSLDI 975
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 1549 (550.3 bits), Expect = 5.3e-159, P = 5.3e-159
Identities = 333/770 (43%), Positives = 482/770 (62%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M FR+ LP+Y + L+ I+ +QV +ISGETGCGKTTQV QFIL++ I +G+ C I
Sbjct: 193 MQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRI 252
Query: 61 ICTQPRRISAMSVSERVASERGEKLGE--SVGYKVRLEG-MKGRDTRLLFCTTGILLRRL 117
+CTQPRRISA+SV+ERVA+ER E G S GY++RL+ + + +L+CTTGI+L+ L
Sbjct: 253 VCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 312
Query: 118 LVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG 177
D L V+H+++DE+HER + D L+ V+KDLL R +L+++LMSATL+AE FS YFG
Sbjct: 313 QSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFG 372
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
+I+IPGFT+PV + LEDI++ Y P +Q + Q K M R+ K +
Sbjct: 373 NCPMIHIPGFTFPVVEYLLEDIIEKIRY--VP-DQKEHRSQFKRGFMQGHVNRQEKEE-K 428
Query: 238 SAVEDTLKAANFNE----YSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFM 293
A+ A E YS+ T + L + D + NLI ++ YI +E GA+LVF+
Sbjct: 429 EAIYKERWPAYIKELRTRYSASTVDVLQMMDDDKVDLNLIAALIRYIVLEEEDGAILVFL 488
Query: 294 TGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
GWD+I++L+D L + +++ + L++ H M + Q +F + GVRKIV+ATNIA
Sbjct: 489 PGWDNISTLHDLLMS-QVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIA 547
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRL 413
ETSITI+DVV+VID GK KET +D NN S + W+S + VQPG CY L
Sbjct: 548 ETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHL 607
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
Y +YQLPEILRTPL+ LCLQIK LRLG IA FLSR + P AV +I++L
Sbjct: 608 YNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHL 667
Query: 474 KIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAP 533
+ ALD EELT LG +LA LP+EP +GKM++ GA+F CL+PVLTI A LS +DPF+ P
Sbjct: 668 MELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIP 727
Query: 534 MDKKDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPSMKVI 590
+ K+ +A+A + + + + SDHL +V AFEGW++A+R YE YCW+ FLS+ +++++
Sbjct: 728 LGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQML 787
Query: 591 DSLRKEFLSLLKDTGLVDCDTSI---CNAWGRDERFIRAVICYGLYPGISSIVQN-GKSS 646
+++ +F L G V + N +E+ I+AVIC GLYP ++ I N GK
Sbjct: 788 HNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIRLNLGKKR 847
Query: 647 SL---KTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFG 703
+ T DG V ++ SVN +++ Y WL+++ KM+ +S++L D T VS LL FG
Sbjct: 848 KMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFG 907
Query: 704 GSIS-QGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNP 752
G IS Q + D + + ++ F +A + + +R+ELD L+Q K+ +P
Sbjct: 908 GDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDSLLQEKIESP 957
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 1546 (549.3 bits), Expect = 1.1e-158, P = 1.1e-158
Identities = 333/770 (43%), Positives = 479/770 (62%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M FR LP+Y + L+ I +QV +ISGETGCGKTTQV QFIL+ I +G+ C I
Sbjct: 314 MQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRI 373
Query: 61 ICTQPRRISAMSVSERVASERGEKLGE--SVGYKVRLEG-MKGRDTRLLFCTTGILLRRL 117
+CTQPRRISA+SV+ERVA+ER E G S GY++RL+ + + +L+CTTGI+L+ L
Sbjct: 374 VCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 433
Query: 118 LVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG 177
D +L V+H+++DE+HER + D L+ V+KDLL+ RP+L+++LMSATL+AE FS YFG
Sbjct: 434 QSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYFG 493
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
+I+IPGFT+PV + LEDI++ Y P Q + Q K M R+ K +
Sbjct: 494 NCPMIHIPGFTFPVVEYLLEDIIEKIRY--VP-EQKEQRSQFKRGFMQGHVNRQEKEEKE 550
Query: 238 SAVE----DTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFM 293
+ + D ++ YS+ T + + + D + NLI ++ +I +E GA+LVF+
Sbjct: 551 AIYKERWPDYVRELR-KRYSASTVDVMEMIDDDKVDLNLIAALIRHIVLEEEDGAILVFL 609
Query: 294 TGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
GWD+I++L+D L + +++ R L++ H M + Q +F + GVRKIV+ATNIA
Sbjct: 610 PGWDNISTLHDLLMS-QVMFKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIA 668
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRL 413
ETSITI+DVV+VID GK KET +D NN S + W+S + VQPG CY L
Sbjct: 669 ETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHL 728
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
Y +YQLPEILRTPL+ LCLQIK LRLG IA FLSR + P AV +I++L
Sbjct: 729 YNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEAVSLSIKHL 788
Query: 474 KIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAP 533
+ ALD EELT LG +LA LP+EP +GKM++ GA+F CL+PVLTI A LS +DPF+ P
Sbjct: 789 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIP 848
Query: 534 MDKKDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPSMKVI 590
+ K+ +A+A + + + D SDHL +V AFEGW++A R YE YCW+ FLS+ +++++
Sbjct: 849 LGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQML 908
Query: 591 DSLRKEFLSLLKDTGLVDCDTSI---CNAWGRDERFIRAVICYGLYPGISSIVQN-GKSS 646
+++ +F L G V N +E+ I+AVIC GLYP ++ I N GK
Sbjct: 909 HNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKR 968
Query: 647 SLK---TMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFG 703
+ T DG V ++ SVN ++E Y WL+++ KM+ +S++L D T VS LL FG
Sbjct: 969 KMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFG 1028
Query: 704 GSIS-QGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNP 752
G IS Q + D + ++ F +A + + +R+ELD L+Q K+ +P
Sbjct: 1029 GDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDTLLQEKIESP 1078
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 1537 (546.1 bits), Expect = 9.9e-158, P = 9.9e-158
Identities = 334/772 (43%), Positives = 483/772 (62%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M FR LP+Y + L+ I +QV +ISGETGCGKTTQV QFIL++ I +G+ C I
Sbjct: 202 MQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRI 261
Query: 61 ICTQPRRISAMSVSERVASERGEKLGE--SVGYKVRLEG-MKGRDTRLLFCTTGILLRRL 117
+CTQPRRISA+SV+ERVA+ER E G S GY++RL+ + + +L+CTTGI+L+ L
Sbjct: 262 VCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 321
Query: 118 LVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG 177
D +L V+H+++DE+HER + D L+ V+KDLLS RP+L++VLMSATL+AE FS YFG
Sbjct: 322 QSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFSEYFG 381
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
+I+IPGFT+PV + LEDI++ Y P Q + Q K M R+ K +
Sbjct: 382 NCPMIHIPGFTFPVVEYLLEDIIEKIRY--VP-EQKEHRSQFKKGFMQGHVNRQEKEEKE 438
Query: 238 SAVEDT----LKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFM 293
+ ++ L+ YS+ T + + + + + NLI ++ YI +E GA+LVF+
Sbjct: 439 AIYKERWPGYLRELR-QRYSASTVDVVEMMDDEKVDLNLIAALIRYIVLEEEDGAILVFL 497
Query: 294 TGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
GWD+I++L+D L + +++ + +++ H M + Q +F GVRKIV+ATNIA
Sbjct: 498 PGWDNISTLHDLLMS-QVMFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIA 556
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRL 413
ETSITI+DVV+VID GK KET +D NN S + W+S + VQPG CY L
Sbjct: 557 ETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHL 616
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
Y +YQLPEILRTPL+ LCLQIK LRLG IA FLSR + P AV +I++L
Sbjct: 617 YNSLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRLMDPPSNEAVLLSIKHL 676
Query: 474 KIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAP 533
+ ALD EELT LG +LA LP+EP +GKM++ GA+F CL+PVLTI A LS +DPF+ P
Sbjct: 677 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIP 736
Query: 534 MDKKDLAEAAKSQFSHDY-SDHLALVRAFEGWKDA-ERGLAGYE--YCWKNFLSAPSMKV 589
+ K+ +A+A + + + D SDHL +V AF+GW+ A +RG YE YCW+ FLS+ ++++
Sbjct: 737 LGKEKVADARRKELAKDTKSDHLTVVNAFKGWEKAKQRGFR-YEKDYCWEYFLSSNTLQM 795
Query: 590 IDSLRKEFLSLLKDTGLVDC---DTSICNAWGRDERFIRAVICYGLYPGISSIVQN-GKS 645
+ +++ +F L G V N +E+ I+AVIC GLYP ++ I N GK
Sbjct: 796 LHNMKGQFAEHLLGAGFVSSRNPQDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKK 855
Query: 646 SSLK---TMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLF 702
+ T DG V ++ SVN ++E Y WL+++ KM+ +S++L D T VS LL F
Sbjct: 856 RKMVKVYTKTDGVVAIHPKSVNVEQTEFNYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFF 915
Query: 703 GGSIS-QGEIDGHLKMMGGYLEFFMNPS-VADMYQCIRRELDELIQNKLLNP 752
GG IS Q + D + ++ F +P+ +A + + +R+ELD L+Q K+ +P
Sbjct: 916 GGDISIQKDNDQETIAVDEWI-IFQSPARIAHLVKELRKELDILLQEKIESP 966
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 1536 (545.8 bits), Expect = 1.3e-157, P = 1.3e-157
Identities = 334/770 (43%), Positives = 479/770 (62%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M FR+ LP+Y + L+ I+ +QV +ISGETGCGKTTQV QFIL++ I G+ C I
Sbjct: 192 MQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGIGSACRI 251
Query: 61 ICTQPRRISAMSVSERVASERGEKLGE--SVGYKVRLEG-MKGRDTRLLFCTTGILLRRL 117
+CTQPRRISA+SV+ERVA+ER E G S GY++RL+ + + +L+CTTGI+L+ L
Sbjct: 252 VCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 311
Query: 118 LVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG 177
D L V+H+++DE+HER + D L+ V+KDLL R +L+++LMSATL+AE FS YFG
Sbjct: 312 QSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFG 371
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
+I+IPGFT+PV + LEDI++ Y P Q + Q K M R+ K +
Sbjct: 372 NCPMIHIPGFTFPVVEYLLEDIIEKIRY--FP-EQKEHRSQFKRGFMQGHVNRQEKEE-K 427
Query: 238 SAVEDTLKAANFNE----YSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFM 293
A+ A E YS+ T + L + D + NLI ++ YI +E GA+LVF+
Sbjct: 428 EAIYKERWPAYIKELQTRYSASTIDVLEMMDDDKVDLNLIAALIRYIVLEEEDGAILVFL 487
Query: 294 TGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
GWD+I++L+D L + +++ R L++ H M + Q +F + GVRKIV+ATNIA
Sbjct: 488 PGWDNISTLHDLLMS-QVMFKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIA 546
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRL 413
ETSITI+DVV+VID GK KET +D NN S + W+S + VQPG CY L
Sbjct: 547 ETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHL 606
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
Y +YQLPEILRTPL+ LCLQIK LRLG IA FLSR + P AV +I++L
Sbjct: 607 YNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEAVVLSIKHL 666
Query: 474 KIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAP 533
+ ALD EELT LG +LA LP+EP +GKM++ GA+F CL+PVLTI A LS +DPF+ P
Sbjct: 667 MELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIP 726
Query: 534 MDKKDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPSMKVI 590
+ K+ +A+A + + + + SDHL +V AFEGW++A+R YE YCW+ FLS+ +++++
Sbjct: 727 LGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQML 786
Query: 591 DSLRKEFLSLLKDTGLVDCDTSI---CNAWGRDERFIRAVICYGLYPGISSIVQN-GKSS 646
+++ +F L G V + N +E+ I+AVIC GLYP ++ I N GK
Sbjct: 787 HNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIRLNLGKKR 846
Query: 647 SL---KTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFG 703
+ T DG V ++ SVN +++ Y WL+++ KM+ +S++L D T VS LL FG
Sbjct: 847 KMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFG 906
Query: 704 GSIS-QGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNP 752
G IS Q + D + + ++ F +A + + +R+ELD L+Q K+ P
Sbjct: 907 GDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDILLQEKIECP 956
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 1525 (541.9 bits), Expect = 1.8e-156, P = 1.8e-156
Identities = 330/770 (42%), Positives = 475/770 (61%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M FR LP+Y + L+ I +QV +ISGETGCGKTTQV QFIL++ I +G+ C I
Sbjct: 200 MQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRI 259
Query: 61 ICTQPRRISAMSVSERVASERGEKLGE--SVGYKVRLEG-MKGRDTRLLFCTTGILLRRL 117
+CTQPRRISA+SV+ERVA+ER E G S GY++RL+ + + +L+CTTGI+L+ L
Sbjct: 260 VCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 319
Query: 118 LVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG 177
D L V+H+++DE+HER + D L+ V+KDLL+ R +L+++LMSATL+AE FS YFG
Sbjct: 320 QSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFG 379
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
+I+IPGFT+PV + LED+++ Y P Q + Q K M R+ K +
Sbjct: 380 NCPMIHIPGFTFPVVEYLLEDVIEKIRY--VP-EQKEHRSQFKRGFMQGHVNRQEKEEKE 436
Query: 238 SAVE----DTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFM 293
+ + D ++ YS+ T + + D + NLI ++ YI +E GA+LVF+
Sbjct: 437 AIYKERWPDYVRELR-RRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFL 495
Query: 294 TGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
GWD+I++L+D L + +++ + L++ H M + Q +F GVRKIV+ATNIA
Sbjct: 496 PGWDNISTLHDLLMS-QVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIA 554
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRL 413
ETSITI+DVV+VID GK KET +D NN S + W+S + VQPG CY L
Sbjct: 555 ETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHL 614
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
Y +YQLPEILRTPL+ LCLQIK LRLG IA FLSR + P AV +I +L
Sbjct: 615 YNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHL 674
Query: 474 KIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAP 533
+ ALD EELT LG +LA LP+EP +GKM++ GA+F CL+PVLTI A LS +DPF+ P
Sbjct: 675 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIP 734
Query: 534 MDKKDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPSMKVI 590
+ K+ +A+A + + + D SDHL +V AFEGW++A R YE YCW+ FLS+ +++++
Sbjct: 735 LGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQML 794
Query: 591 DSLRKEFLSLLKDTGLVDCDTSI---CNAWGRDERFIRAVICYGLYPGISSIVQN-GKSS 646
+++ +F L G V N +E+ I+AVIC GLYP ++ I N GK
Sbjct: 795 HNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKR 854
Query: 647 SLK---TMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFG 703
+ T DG V ++ SVN +++ Y WL+++ KM+ +S++L D T VS LL FG
Sbjct: 855 KMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFG 914
Query: 704 GSIS-QGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNP 752
G IS Q + D + ++ F +A + + +R+ELD L+Q K+ +P
Sbjct: 915 GDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESP 964
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 1515 (538.4 bits), Expect = 2.1e-155, P = 2.1e-155
Identities = 329/772 (42%), Positives = 479/772 (62%)
Query: 1 MLEFRRNLPAY--KEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVC 58
M FR LP+Y ++K L+ I+ N+V +ISGETGCGKTTQV QFIL+ I +G+ C
Sbjct: 179 MQRFREKLPSYGMRQKQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTC 238
Query: 59 SIICTQPRRISAMSVSERVASERGEKLG--ESVGYKVRLEG-MKGRDTRLLFCTTGILLR 115
I+CTQPRRISA+SV+ERVA+ER E G +S GY++RL+ + + +L+CTTGI+L+
Sbjct: 239 RIVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQ 298
Query: 116 RLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSY 175
L D++L ++HV++DE+HER + D L+ ++KDLL+ R +L+++LMSATL+AE FS Y
Sbjct: 299 WLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEY 358
Query: 176 FGGATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQ 235
F +I+IPGFT+PV + LED+++ Y TP N D + K M R K +
Sbjct: 359 FDNCPMIHIPGFTFPVVEYLLEDVIEKLRY--TPENT-DRRPRWKKGFMQGHISRPEKEE 415
Query: 236 IASAVEDT----LKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLV 291
+ L+ YS+ T ++L + D + +LI ++ +I +E GA+LV
Sbjct: 416 KEEIYRERWPEYLRQLR-GRYSAGTIDALEMMDDDKVDLDLIAALIRHIVLEEEDGAILV 474
Query: 292 FMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATN 351
F+ GWD+I++L+D L + +++ R +++ H M + Q +F + GVRKIV+ATN
Sbjct: 475 FLPGWDNISTLHDLLMS-QVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATN 533
Query: 352 IAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECY 411
IAETSITI+DVVFVID GK KET +D NN S + W+S + VQPG CY
Sbjct: 534 IAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCY 593
Query: 412 RLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIE 471
LY +YQLPEILRTPL+ LCLQIK L+LG IA FLS+ + P AV AI
Sbjct: 594 HLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAIN 653
Query: 472 YLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFL 531
+L + ALD EELT LG +LA LP+EP +GKM++ GA+F CL+PVLTI A LS +DPF+
Sbjct: 654 HLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFV 713
Query: 532 APMDKKDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAER-GL-AGYEYCWKNFLSAPSMK 588
P+ K+ +A+A + + S + SDHL +V AF GW++ R G +YCW+ FLS +++
Sbjct: 714 IPLGKEKVADARRKELSKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQ 773
Query: 589 VIDSLRKEFLSLLKDTGLV---DCDTSICNAWGRDERFIRAVICYGLYPGISSIVQN--G 643
++ +++ +F L G V D N +E+ ++AVIC GLYP ++ I +
Sbjct: 774 MLHNMKGQFAEHLLAAGFVNSRDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSK 833
Query: 644 KSSSLK--TMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLL 701
K +K T DG V ++ SVN E+E Y WLV++ KM+ +S++L D T VS LL
Sbjct: 834 KRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLF 893
Query: 702 FGGSIS-QGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNP 752
FGG IS Q + D + ++ F +A + + +R+ELD+L+Q K+ NP
Sbjct: 894 FGGDISIQKDKDQDTIAVDEWIVFQSPARIAHLVKNLRQELDDLLQEKIENP 945
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 1493 (530.6 bits), Expect = 4.5e-153, P = 4.5e-153
Identities = 330/770 (42%), Positives = 471/770 (61%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M FR LP+Y + L+ I +QV +ISGETGCGKTTQV QFIL+ I +G+ C I
Sbjct: 194 MQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRI 253
Query: 61 ICTQPRRISAMSVSERVASERGEKLGE--SVGYKVRLEG-MKGRDTRLLFCTTGILLRRL 117
+CTQPRRISA+SV+ERVA+ER E G S GY++RL+ + + +L+CTTGI+L+ L
Sbjct: 254 VCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 313
Query: 118 LVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG 177
D +L V+H+++DE+HER + D L+ V+KDLL+ RP+L+++LMSATL+AE FS YFG
Sbjct: 314 QSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYFG 373
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
+I+IPGFT+PV + LEDI++ Y P Q + Q K M R+ K +
Sbjct: 374 NCPMIHIPGFTFPVVEYLLEDIIEKIRY--VP-EQKEQRSQFKRGFMQGHVNRQEKEEKE 430
Query: 238 SAVE----DTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFM 293
+ + D ++ YS+ T + + + D + NLI ++ +I +E GA+LVF+
Sbjct: 431 AIYKERWPDYVRELR-KRYSASTVDVMEMIDDDKVDLNLIAALIRHIVLEEEDGAILVFL 489
Query: 294 TGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
GWD+I++L+D L + + T G +F + GVRKIV+ATNIA
Sbjct: 490 PGWDNISTLHDLLMSQVMFKSDTI-------GQ--------VFKKTPPGVRKIVIATNIA 534
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRL 413
ETSITI+DVV+VID GK KET +D NN S + W+S + VQPG CY L
Sbjct: 535 ETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHL 594
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
Y +YQLPEILRTPL+ LCLQIK LRLG IA FLSR + P AV +I++L
Sbjct: 595 YNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEAVSLSIKHL 654
Query: 474 KIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAP 533
+ ALD EELT LG +LA LP+EP +GKM++ GA+F CL+PVLTI A LS +DPF+ P
Sbjct: 655 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIP 714
Query: 534 MDKKDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPSMKVI 590
+ K+ +A+A + + + D SDHL +V AFEGW++A R YE YCW+ FLS+ +++++
Sbjct: 715 LGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQML 774
Query: 591 DSLRKEFLSLLKDTGLVDCDTSI---CNAWGRDERFIRAVICYGLYPGISSIVQN-GKSS 646
+++ +F L G V N +E+ I+AVIC GLYP ++ I N GK
Sbjct: 775 HNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKR 834
Query: 647 SLK---TMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFG 703
+ T DG V ++ SVN ++E Y WL+++ KM+ +S++L D T VS LL FG
Sbjct: 835 KMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFG 894
Query: 704 GSIS-QGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNP 752
G IS Q + D + ++ F +A + + +R+ELD L+Q K+ +P
Sbjct: 895 GDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDTLLQEKIESP 944
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 1491 (529.9 bits), Expect = 7.4e-153, P = 7.4e-153
Identities = 324/778 (41%), Positives = 483/778 (62%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
ML+FR+ LP+Y + L+ IS N+V++ISGETGCGKTTQV QFIL+ I +G++C +
Sbjct: 213 MLKFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILDDFIQRGQGSLCRV 272
Query: 61 ICTQPRRISAMSVSERVASERGEKLGE--SVGYKVRLEG-MKGRDTRLLFCTTGILLRRL 117
+CTQPRRISA+SV+ERVA ER E +GE S GY++RL+ + + LL+CTTG++L+ L
Sbjct: 273 VCTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQWL 332
Query: 118 LVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG 177
D L +TH+++DE+HER + D L+ ++KDLL+ R +L++VLMSATL+AE FS YF
Sbjct: 333 HSDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSATLNAEKFSKYFN 392
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
+I+IPG+T+PV + LED++++ G++ Y Q + +++ S P K K +
Sbjct: 393 NCPMIHIPGYTFPVTEYLLEDVVELLGFQ-PRYKQRKPHYRKRNNHGSSARPEKGKIEAK 451
Query: 238 SAVEDTLKAANFNE-YSSQTRESLSCWNPDC-IGFNLIEYVLCYICEKERPGAVLVFMTG 295
A + +S T E L + D I L ++ +I E GA+LVF+ G
Sbjct: 452 YHESWPCYARTLRDRFSDTTIEVLGMMDDDDNIDLELTAALIRHIAVNENEGAILVFLPG 511
Query: 296 WDDINSLNDKLQANRILGDPT-RVLLLTCHGSMAS-SEQRLI------FDEPESGVRKIV 347
WD+I++LND L ++++ R +++ H M + S+ ++I F +P GVRKIV
Sbjct: 512 WDNISTLNDLLMSDQMFKSGRYRFIIIPLHSLMPTVSQTQVISLFPQVFKKPPPGVRKIV 571
Query: 348 LATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQP 407
+ATNIAETSITI+DVV+VID GK KET +D NN + W+S + V P
Sbjct: 572 IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVSIANAKQRKGRAGRVSP 631
Query: 408 GECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQ 467
G+CY LY YQLPEI RTPL+ LCLQIK L+LG IA FL + + P A++
Sbjct: 632 GKCYHLYNGLRASLLDNYQLPEIQRTPLEELCLQIKVLKLGPIATFLQKTMDPPSDRAIE 691
Query: 468 NAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVR 527
AI +L + ALD +E+LT LG +LA +P+EP +GKM++ GA+ CL+PVLTI A LS +
Sbjct: 692 LAITHLVDLNALDRDEKLTPLGFHLARMPVEPHIGKMILFGALLGCLDPVLTIAASLSFK 751
Query: 528 DPFLAPMDKKDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSA 584
DPF P+ K+ +A+ + FS + SDHL++V AF GW+DA+R + +E YCW NFLSA
Sbjct: 752 DPFFIPLGKEKIADQRRKMFSQNSRSDHLSIVNAFLGWEDAKRQGSRFEREYCWDNFLSA 811
Query: 585 PSMKVIDSLRKEFLSLLKDTGLVDC----DTSICNAWGRDERFIRAVICYGLYPGISSIV 640
+++++ +++ +F L G V+ D S N +++ ++AVI GLYP ++ I
Sbjct: 812 NTLQMLQNMKGQFAEHLLRAGFVNSKDPKDPS-SNINSENKKLVKAVIVAGLYPKVAKIS 870
Query: 641 --QNGKSS---SLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVS 695
N K + T DG+V ++ SVNA E++ Y WLV++ KMK S+FL D T VS
Sbjct: 871 PSHNKKRPMPVKVYTKADGKVCIHPKSVNAEETQFQYKWLVYHLKMKTTSIFLYDCTEVS 930
Query: 696 DSVLLLFGGSIS-QGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNP 752
LL FGG+IS Q + D + ++ F +A + + +++ELD L++ K+ +P
Sbjct: 931 PFSLLFFGGNISIQRDQDQDTIAVDEWIVFQSPGRIAHLVKDLKKELDVLLEEKIKSP 988
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 1484 (527.5 bits), Expect = 4.1e-152, P = 4.1e-152
Identities = 329/770 (42%), Positives = 472/770 (61%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M FR LP+Y + L+ I +QV +ISGETGCGKTTQV QFIL++ I +G+ C I
Sbjct: 200 MQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRI 259
Query: 61 ICTQPRRISAMSVSERVASERGEKLGE--SVGYKVRLEG-MKGRDTRLLFCTTGILLRRL 117
+CTQPRRISA+SV+ERVA+ER E G S GY++RL+ + + +L+CTTGI+L+ L
Sbjct: 260 VCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 319
Query: 118 LVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG 177
D L V+H+++DE+HER + D L+ V+KDLL+ R +L+++LMSATL+AE FS YFG
Sbjct: 320 QSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFG 379
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
+I+IPGFT+PV + LED+++ Y P Q + Q K M R+ K +
Sbjct: 380 NCPMIHIPGFTFPVVEYLLEDVIEKIRY--VP-EQKEHRSQFKRGFMQGHVNRQEKEEKE 436
Query: 238 SAVE----DTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFM 293
+ + D ++ YS+ T + + D + NLI ++ YI +E GA+LVF+
Sbjct: 437 AIYKERWPDYVRELR-RRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFL 495
Query: 294 TGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
GWD+I++L+D L + +V+ + G+M+ +F GVRKIV+ATNIA
Sbjct: 496 PGWDNISTLHDLLMS--------QVMFKS--GTMSQ-----VFKRTPPGVRKIVIATNIA 540
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRL 413
ETSITI+DVV+VID GK KET +D NN S + W+S + VQPG CY L
Sbjct: 541 ETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHL 600
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
Y +YQLPEILRTPL+ LCLQIK LRLG IA FLSR + P AV +I +L
Sbjct: 601 YNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHL 660
Query: 474 KIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAP 533
+ ALD EELT LG +LA LP+EP +GKM++ GA+F CL+PVLTI A LS +DPF+ P
Sbjct: 661 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIP 720
Query: 534 MDKKDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPSMKVI 590
+ K+ +A+A + + + D SDHL +V AFEGW++A R YE YCW+ FLS+ +++++
Sbjct: 721 LGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQML 780
Query: 591 DSLRKEFLSLLKDTGLVDCDTSI---CNAWGRDERFIRAVICYGLYPGISSIVQN-GKSS 646
+++ +F L G V N +E+ I+AVIC GLYP ++ I N GK
Sbjct: 781 HNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKR 840
Query: 647 SLK---TMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFG 703
+ T DG V ++ SVN +++ Y WL+++ KM+ +S++L D T VS LL FG
Sbjct: 841 KMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFG 900
Query: 704 GSIS-QGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNP 752
G IS Q + D + ++ F +A + + +R+ELD L+Q K+ +P
Sbjct: 901 GDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESP 950
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 766 (274.7 bits), Expect = 1.0e-147, Sum P(3) = 1.0e-147
Identities = 184/453 (40%), Positives = 262/453 (57%)
Query: 150 DLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPGFTYPVRTHFLEDILDMTGYRLTP 209
D SR+ L+++LMSAT+DA+LFS YFG VI G T+PV THFLE+I + Y L P
Sbjct: 768 DNTSRK--LKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYLLAP 825
Query: 210 YN----QIDDYGQEKMWKMSKQAPRKRKSQIASA-------VEDTLK----AANFNEYSS 254
+ + D ++K+ ++ + R +K+ + + ED L ++N+N YS
Sbjct: 826 DSPAALRSDTSIKDKLGSVNDR--RGKKNLVLAGWGDDYLLSEDCLNPFYVSSNYNSYSD 883
Query: 255 QTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKLQANRILGD 314
QT+++L N D I + L+E ++C+I + GA+L+F+ G +I L D L A+
Sbjct: 884 QTQQNLKRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRG 943
Query: 315 PTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKET 374
P LL H S+ASSEQR +F P G+RK++ ATNIAETSITI+DVV+VID GK KE
Sbjct: 944 PAADWLLPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKEN 1003
Query: 375 SYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAE-YQLPEILRT 433
Y+ S ++ WIS + V+PG C+ LY R ++ YQ+PE+LR
Sbjct: 1004 RYNPQKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRM 1063
Query: 434 PLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLA 493
PL LCLQIK L LG I FLSRAL+ P A+ +AI L +GA++ +EELT LG +LA
Sbjct: 1064 PLVELCLQIKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLA 1123
Query: 494 MLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHD--- 550
LP++ +GKML+ G IF CL P+L+I A LS + PF+ P D+K + K D
Sbjct: 1124 KLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGV 1183
Query: 551 ----------YSDHLALVRAFEGWKDA--ERGL 571
SDHL ++ A++ W ERG+
Sbjct: 1184 SSSDLNNNDRQSDHLLMMVAYDKWVKILQERGM 1216
Score = 565 (203.9 bits), Expect = 1.0e-147, Sum P(3) = 1.0e-147
Identities = 120/219 (54%), Positives = 153/219 (69%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
ML+ R LP + KN +L + + V+++ GETG GKTTQVPQFIL+ I S G C+I
Sbjct: 607 MLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNI 666
Query: 61 ICTQPRRISAMSVSERVASERGEK---LGES-VGYKVRLEGMKGRDTRLLFCTTGILLRR 116
ICTQPRRI+A+SV++RVA ER E L +S VGY+VRLE + TRLLFCTTGILLR+
Sbjct: 667 ICTQPRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRK 726
Query: 117 LLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRP------ELRLVLMSATLDAE 170
L DR L VTH+IVDEVHER + DFLLI+LK L+ ++ +L+++LMSAT+DA+
Sbjct: 727 LAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDAD 786
Query: 171 LFSSYFGGATVINIPGFTYPVRTHFLEDILDMTGYRLTP 209
LFS YFG VI G T+PV THFLE+I + Y L P
Sbjct: 787 LFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYLLAP 825
Score = 368 (134.6 bits), Expect = 4.6e-99, Sum P(3) = 4.6e-99
Identities = 86/200 (43%), Positives = 120/200 (60%)
Query: 425 YQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEE 484
YQ+PE+LR PL LCLQIK L LG I FLSRAL+ P A+ +AI L +GA++ +EE
Sbjct: 1055 YQVPEMLRMPLVELCLQIKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEE 1114
Query: 485 LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK 544
LT LG +LA LP++ +GKML+ G IF CL P+L+I A LS + PF+ P D+K + K
Sbjct: 1115 LTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVK 1174
Query: 545 SQFSHD-------------YSDHLALVRAFEGWKDA--ERGL-AGYEYCWKNFLSAPSMK 588
D SDHL ++ A++ W ERG+ A +C FLS+ M+
Sbjct: 1175 LALLSDNGVSSSDLNNNDRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMR 1234
Query: 589 VIDSLRKEFLSLLKDTGLVD 608
+I +R +F +LL D GL++
Sbjct: 1235 MIRDMRVQFGTLLADIGLIN 1254
Score = 179 (68.1 bits), Expect = 1.0e-147, Sum P(3) = 1.0e-147
Identities = 48/174 (27%), Positives = 92/174 (52%)
Query: 615 NAWGRDERFIRAVICYGLYPGIS------------SIVQNG-KSSSLKTMEDG--QVFLY 659
N + + ++A++C GLYP I+ S+ + G ++ S DG +V ++
Sbjct: 1281 NMYSQQPEVVKAILCAGLYPNIAANDKGITETTFNSLTKQGNQTKSYSAWYDGRREVHIH 1340
Query: 660 SNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMG 719
+S+N+ P+LVF EK++ N V+L+D+T VS +LLFGGSI+ G + +
Sbjct: 1341 PSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIVSPFSILLFGGSINVHHQSGSVTI-D 1399
Query: 720 GYLEFFMNPSVADMYQCIRRELDELIQNKLLNPRLNIHTHEDLLAA-VRLLVAE 772
G+L+ A +++ +R L ++++ + P + H +++ + V LL+ E
Sbjct: 1400 GWLKVAAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSMVHLLIEE 1453
Score = 37 (18.1 bits), Expect = 9.3e-42, Sum P(3) = 9.3e-42
Identities = 6/17 (35%), Positives = 8/17 (47%)
Query: 255 QTRESLSCWNPDCIGFN 271
Q E L CW + G +
Sbjct: 198 QEEEELECWEDEVDGID 214
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 653 (234.9 bits), Expect = 2.3e-143, Sum P(4) = 2.3e-143
Identities = 131/251 (52%), Positives = 176/251 (70%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
ML R+ LPA++E+ +L ++ +QV+++SG TGCGKTTQ+PQFIL++ + AV +I
Sbjct: 530 MLHERQKLPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPNAVANI 589
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
ICTQPRRISA+SV+ERVA ER E++G +VGY++RLE +K TRLL+CTTG+LLRRL D
Sbjct: 590 ICTQPRRISAISVAERVAKERTERVGVTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 649
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+G+THVIVDEVHER DFLL+VLKD++ +RP+LR++LMSATL+AELFS YF
Sbjct: 650 LTLQGITHVIVDEVHERTEESDFLLLVLKDIMVQRPDLRIILMSATLNAELFSQYFHSCP 709
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAV 240
+INIPG T+PV FLED++ MT Y L D + K + + K V
Sbjct: 710 IINIPGRTFPVDQFFLEDVIAMTRYVLE-----DSSPYRRKTKQENKVTARHKRTAFEEV 764
Query: 241 EDTLKAANFNE 251
E+ L+ A E
Sbjct: 765 EEDLRHAGLLE 775
Score = 625 (225.1 bits), Expect = 2.3e-143, Sum P(4) = 2.3e-143
Identities = 137/361 (37%), Positives = 218/361 (60%)
Query: 258 ESLSCWNPDCIGFNLIEYVLCYICEKER---PGAVLVFMTGWDDINSLNDKLQANRILGD 314
+++S + D + LIE +L +I + + PGAVL+F+ G +I L ++LQ+N + +
Sbjct: 809 KTMSVMDLDKVNLELIEALLEWIVDGKHSYPPGAVLIFLPGLAEIKMLYEQLQSNALFNN 868
Query: 315 --PTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAK 372
R ++ H S++S EQ+ +F P +GV KI+++TNIAETS+TI+DVV+VID GK K
Sbjct: 869 RHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMK 928
Query: 373 ETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYD-AFAEYQLPEIL 431
E YD L +++S + V G C+ L+ Y+ + QLPEI
Sbjct: 929 EKRYDPSKGMESLEDTFVSRANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQLPEIQ 988
Query: 432 RTPLQSLCLQIKSLRL---GTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVL 488
R PL+ LCL+IK L + ++ LSR ++ P +++ + L+ +GAL +E+LT L
Sbjct: 989 RVPLEQLCLRIKILEMFSAQSLHSVLSRLIEPPRTESLRASKLRLQDLGALTADEKLTPL 1048
Query: 489 GQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFS 548
G +LA LP++ ++GK+++ G IF CL+P LTI A L+ + PF++P DK++ A K F+
Sbjct: 1049 GYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPWDKREEANKKKLDFA 1108
Query: 549 HDYSDHLALVRAFEGWK--DAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGL 606
SD+LAL++A++GW+ E A Y YC +NFLS ++ I SL+++F LL D G
Sbjct: 1109 VGNSDYLALLQAYKGWRLSTKEGSQASYNYCRENFLSGRVLQEIASLKRQFTELLSDIGF 1168
Query: 607 V 607
V
Sbjct: 1169 V 1169
Score = 162 (62.1 bits), Expect = 2.3e-143, Sum P(4) = 2.3e-143
Identities = 40/121 (33%), Positives = 72/121 (59%)
Query: 644 KSSSLK--TMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLL 701
K+ LK T DG V ++ +SVN + P+LV++EK+K + VF++D + VS L+L
Sbjct: 1242 KAEELKFVTKNDGYVHIHPSSVNYQTRHFESPYLVYHEKIKTSRVFIRDCSMVSVYPLVL 1301
Query: 702 FGGS-----ISQGEIDGHLKMMGGYLEFFM-NPSVADMYQCIRRELDELIQNKLLNPRLN 755
GG + +GE + + G++ F + VA++ + +R ELD+L+Q+K+ NP ++
Sbjct: 1302 LGGGQVHMQLQKGEFV--ISLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSMD 1359
Query: 756 I 756
+
Sbjct: 1360 L 1360
Score = 53 (23.7 bits), Expect = 2.3e-143, Sum P(4) = 2.3e-143
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 605 GLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ-NGKSSSLKT 650
G++D N+ + + I A++C LYP + + + GK T
Sbjct: 1188 GVLDATGEEANSNAENFKLISAMLCAALYPNVVQVKKPEGKYQKTST 1234
Score = 43 (20.2 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 317 RVLLLTCHGSMASSEQRLIFD-EPESGVRKIVLATNIAETS 356
R +L +C+G++ +S + L+ E K+ ++ A+TS
Sbjct: 197 RTVLRSCNGNIGASLEHLLLQCFAERYGEKMQISATAAQTS 237
Score = 39 (18.8 bits), Expect = 6.2e-64, Sum P(2) = 6.2e-64
Identities = 13/51 (25%), Positives = 31/51 (60%)
Query: 678 NEKMKVNSVFLKDSTAVSDSVLLLFGGSISQGEIDG-HLKMMGGYLEFFMN 727
++KM + +FL S+ V+ +VL ++S ++D +L+++ LE+ ++
Sbjct: 787 DQKMNLTVLFLSFSSGVNKTVLK----TMSVMDLDKVNLELIEALLEWIVD 833
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 1398 (497.2 bits), Expect = 5.3e-143, P = 5.3e-143
Identities = 301/689 (43%), Positives = 427/689 (61%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M FR LP+Y + L+ I +QV +ISGETGCGKTTQV QFIL++ I +G+ C I
Sbjct: 114 MQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRI 173
Query: 61 ICTQPRRISAMSVSERVASERGEKLGE--SVGYKVRLEG-MKGRDTRLLFCTTGILLRRL 117
+CTQPRRISA+SV+ERVA+ER E G S GY++RL+ + + +L+CTTGI+L+ L
Sbjct: 174 VCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 233
Query: 118 LVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG 177
D L V+H+++DE+HER + D L+ V+KDLL+ R +L+++LMSATL+AE FS YFG
Sbjct: 234 QSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFG 293
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
+I+IPGFT+PV + LED+++ Y P Q + Q K M R+ K +
Sbjct: 294 NCPMIHIPGFTFPVVEYLLEDVIEKIRY--VP-EQKEHRSQFKRGFMQGHVNRQEKEEKE 350
Query: 238 SAVE----DTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFM 293
+ + D ++ YS+ T + + D + NLI ++ YI +E GA+LVF+
Sbjct: 351 AIYKERWPDYVRELR-RRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFL 409
Query: 294 TGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
GWD+I++L+D L + +++ + L++ H M + Q +F GVRKIV+ATNIA
Sbjct: 410 PGWDNISTLHDLLMS-QVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIA 468
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRL 413
ETSITI+DVV+VID GK KET +D NN S + W+S + VQPG CY L
Sbjct: 469 ETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHL 528
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
Y +YQLPEILRTPL+ LCLQIK LRLG IA FLSR + P AV +I +L
Sbjct: 529 YNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHL 588
Query: 474 KIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAP 533
+ ALD EELT LG +LA LP+EP +GKM++ GA+F CL+PVLTI A LS +DPF+ P
Sbjct: 589 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIP 648
Query: 534 MDKKDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPSMKVI 590
+ K+ +A+A + + + D SDHL +V AFEGW++A R YE YCW+ FLS+ +++++
Sbjct: 649 LGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQML 708
Query: 591 DSLRKEFLSLLKDTGLVDCDTSI---CNAWGRDERFIRAVICYGLYPGISSIVQN-GKSS 646
+++ +F L G V N +E+ I+AVIC GLYP ++ I N GK
Sbjct: 709 HNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKR 768
Query: 647 SLK---TMEDGQVFLYSNSVNARESEIPY 672
+ T DG V ++ SVN +++ Y
Sbjct: 769 KMVKVYTKTDGLVAVHPKSVNVEQTDFHY 797
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 645 (232.1 bits), Expect = 5.8e-143, Sum P(4) = 5.8e-143
Identities = 132/264 (50%), Positives = 190/264 (71%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R++LPA++E+ +L +S++QV++ISG TGCGKTTQ+PQFIL+ ++ V +I
Sbjct: 533 ILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLSGPPEKVANI 592
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
ICTQPRRISA+SV+ERVA ER E++G +VGY++RLE +K TRLL+CTTG+LLRRL D
Sbjct: 593 ICTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 652
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L+GVTH+IVDEVHER DFLL+VLKD++ +RP L+++LMSATL+AELFS YF
Sbjct: 653 TSLQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPNLQVILMSATLNAELFSEYFSSCP 712
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
VI IPG T+PV FLED + +T Y L +PY M +M+K+ + R+S+ A
Sbjct: 713 VITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPY-------MRSMKQMTKEKLKARRSRTA 765
Query: 238 -SAVEDTLKAANFNEYSSQTRESL 260
VE+ L+ + ++ ++++
Sbjct: 766 FEEVEEDLRLSLHLQHQDSVKDAV 789
Score = 631 (227.2 bits), Expect = 5.8e-143, Sum P(4) = 5.8e-143
Identities = 139/372 (37%), Positives = 225/372 (60%)
Query: 247 ANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKER---PGAVLVFMTGWDDINSLN 303
A + S +++S + + + LIE +L +I + + PGA+LVF+ G +I L
Sbjct: 801 ARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLY 860
Query: 304 DKLQANRILGDPT--RVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITIND 361
++LQ+N + + R ++ H S++S EQ+ +F +P GV KI+++TNIAETSITI+D
Sbjct: 861 EQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDD 920
Query: 362 VVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYD- 420
VV+VID GK KE YDA L +++S + V G C+ L+ ++
Sbjct: 921 VVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNH 980
Query: 421 AFAEYQLPEILRTPLQSLCLQIKSLRLGT---IAGFLSRALQSPELLAVQNAIEYLKIIG 477
+ QLPEI R PL+ LCL+IK L + + + SR ++ P +++ + L+ +G
Sbjct: 981 QLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHTDSLRASKIRLRDLG 1040
Query: 478 ALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKK 537
AL +E+LT LG +LA LP++ ++GK+++ G+IF CL+P LTI A L+ + PF++P DKK
Sbjct: 1041 ALTPDEKLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKK 1100
Query: 538 DLAEAAKSQFSHDYSDHLALVRAFEGWK-DAERGL-AGYEYCWKNFLSAPSMKVIDSLRK 595
+ A K +F+ SD+LAL+RA++GW+ + G+ A Y YC +NFLS ++ + SL++
Sbjct: 1101 EEANQKKLEFAFANSDYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKR 1160
Query: 596 EFLSLLKDTGLV 607
+F LL D G V
Sbjct: 1161 QFTELLSDIGFV 1172
Score = 170 (64.9 bits), Expect = 5.8e-143, Sum P(4) = 5.8e-143
Identities = 43/123 (34%), Positives = 74/123 (60%)
Query: 644 KSSSLK--TMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLL 701
KS LK T DG V ++ +SVN + P+LV++EK+K + VF++D + VS L+L
Sbjct: 1244 KSDELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSMVSVYPLVL 1303
Query: 702 FGGS-----ISQGEIDGHLKMMGGYLEFFM-NPSVADMYQCIRRELDELIQNKLLNPRLN 755
FGG + +GE + + G++ F + VA++ + +R ELD+L+Q+K+ NP ++
Sbjct: 1304 FGGGQVSVQLQRGEFV--VSLDDGWIRFAAASHQVAELVKELRCELDQLLQDKIKNPSID 1361
Query: 756 IHT 758
+ T
Sbjct: 1362 LCT 1364
Score = 55 (24.4 bits), Expect = 5.8e-143, Sum P(4) = 5.8e-143
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 605 GLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ-NGKSSSLKT 650
G++D N+ + + I A++C LYP + + GK T
Sbjct: 1190 GILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTST 1236
Score = 38 (18.4 bits), Expect = 3.8e-76, Sum P(5) = 3.8e-76
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 124 KGVTHVIVDEVHERGMNEDFLL 145
+ V HV V+E E+ E F L
Sbjct: 229 EAVAHVSVEECVEQRQEEAFAL 250
Score = 38 (18.4 bits), Expect = 3.8e-76, Sum P(5) = 3.8e-76
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 211 NQIDDYGQEKMWKMSKQAPRKRKSQIASAVEDTLKAANF 249
N++ G E + SK K+K + E TL+ F
Sbjct: 264 NRVWTIGLELEYLTSKFCKSKQKESTKNIQETTLEICKF 302
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 676 (243.0 bits), Expect = 1.4e-140, Sum P(4) = 1.4e-140
Identities = 152/409 (37%), Positives = 241/409 (58%)
Query: 214 DDYGQEKMWKMSKQAPRKRKSQIASAVEDTLK----AANFNEYSSQTRESLSCWNPDCIG 269
DDYG W + R ++S S + L ++ YS ++L+ + D I
Sbjct: 816 DDYGG---WSFTSF--RNKESVKDSVPDQQLSQQDLTVRYSNYSKSVVKTLAAMDLDKIN 870
Query: 270 FNLIEYVLCYICEKER---PGAVLVFMTGWDDINSLNDKLQANRILGD--PTRVLLLTCH 324
+L+E +L +I + + PGAVLVF+ G +I L ++LQ+NR+ + R ++ H
Sbjct: 871 MDLVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLH 930
Query: 325 GSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSC 384
S+++ EQ+ +F P++GV KI+++TNIAETS+TI+DVV+VID G+ KE YDA +
Sbjct: 931 SSLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMES 990
Query: 385 LLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIK 443
L W+S + V G C+ L+ ++ ++ QLPEI R PL+ LCL++K
Sbjct: 991 LEDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVK 1050
Query: 444 SLRLGT---IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPK 500
L + + S+ ++ P +++ A + L +GAL E LT LG +LA LP++ +
Sbjct: 1051 VLEVFAERPLDSVFSQLIEPPTEGSLEAAKQRLCALGALTDEESLTPLGWHLACLPVDVR 1110
Query: 501 LGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRA 560
+GK+++LGAIF CL+P LTI A L+ + PF++P DK++ A K FS SDHLAL++A
Sbjct: 1111 IGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAFSLANSDHLALMQA 1170
Query: 561 FEGWKDA-ERGL-AGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV 607
++GW +A + G AGY+YC +NFLS ++ I L+++F LL D G V
Sbjct: 1171 YKGWCNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDIGFV 1219
Score = 599 (215.9 bits), Expect = 1.4e-140, Sum P(4) = 1.4e-140
Identities = 120/216 (55%), Positives = 160/216 (74%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVR-GAVCS 59
M E R+ LPA++++ +L + +NQV++ISG TGCGKTTQ+PQFIL++ + + R V +
Sbjct: 575 MQEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILDNFLQTGRPDRVAN 634
Query: 60 IICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLV 119
IICTQPRRISA++V+ RVA ER E LG S GY++RLE ++ TRL+FCTTG+LLRRL
Sbjct: 635 IICTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRLEG 694
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGA 179
D L GVTHVIVDEVHER DFLL+VLKDL+ +R +L++++MSATL+AELFS YF
Sbjct: 695 DPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELFSQYFNNC 754
Query: 180 TVINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQ 212
I+IPG T+PV FLED + T Y + +PY +
Sbjct: 755 PCIHIPGRTFPVEQFFLEDAIAKTRYVIEDGSPYRR 790
Score = 152 (58.6 bits), Expect = 1.4e-140, Sum P(4) = 1.4e-140
Identities = 36/126 (28%), Positives = 69/126 (54%)
Query: 635 GISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAV 694
G + + T DG V ++ +SVN P+LV++EK+K + VF++D + V
Sbjct: 1285 GAMKMQPKAEEQRFMTKSDGAVHIHPSSVNFSVRHYDSPYLVYHEKVKTSRVFIRDCSMV 1344
Query: 695 SDSVLLLFGGSISQGEID-GH--LKMMGGYLEFFM-NPSVADMYQCIRRELDELIQNKLL 750
++LFGG E+ G + + G+++F + VA++ + +R ELD+L++ K+
Sbjct: 1345 CVYPMVLFGGGQVNVELQRGQFIISLDDGWIKFAAASHEVAELVKELRWELDQLLEEKIK 1404
Query: 751 NPRLNI 756
NP +++
Sbjct: 1405 NPSMDL 1410
Score = 40 (19.1 bits), Expect = 1.4e-140, Sum P(4) = 1.4e-140
Identities = 9/44 (20%), Positives = 20/44 (45%)
Query: 596 EFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSI 639
E +S G+++ N + + + A++C LYP + +
Sbjct: 1229 EKMSSKGSDGVLEATGYEANLNSDNTKLMSAMLCAALYPNVVQV 1272
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 641 (230.7 bits), Expect = 1.3e-139, Sum P(4) = 1.3e-139
Identities = 131/246 (53%), Positives = 181/246 (73%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R++LPA++E+ +L +S++QV+++SG TGCGKTTQ+PQFIL+ + V +I
Sbjct: 530 VLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEKVANI 589
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
ICTQPRRISA+SV+ERVA ER E++G +VGY++RLE +K TRLL+CTTG+LLRRL D
Sbjct: 590 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 649
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+GVTH+IVDEVHER DFLL+VLKD++ +RP L+++LMSATL+AELFS YF
Sbjct: 650 TALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSATLNAELFSEYFNSCP 709
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA-SA 239
VI IPG T+PV FLED + +T Y L + Y + M +MSK+ + R+S+ A
Sbjct: 710 VITIPGRTFPVDQFFLEDAIAVTRYVLQDGSP---YARS-MKQMSKEKLKARRSRTAFEE 765
Query: 240 VEDTLK 245
VE+ L+
Sbjct: 766 VEEDLR 771
Score = 626 (225.4 bits), Expect = 1.3e-139, Sum P(4) = 1.3e-139
Identities = 138/374 (36%), Positives = 224/374 (59%)
Query: 247 ANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKER-----PGAVLVFMTGWDDINS 301
A + S +++S + + + LIE +L +I + + PGA+LVF+ G +I
Sbjct: 798 ARYQGVSKSVIKTMSVMDFEKVNLELIEALLEWIVDGKHSYPPDPGAILVFLPGLAEIKM 857
Query: 302 LNDKLQANRILGD--PTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITI 359
L ++LQ+N + + R ++ H S++S EQ+ +F +P GV KI+++TNIAETSITI
Sbjct: 858 LYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITI 917
Query: 360 NDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVY 419
+DVV+VID GK KE YDA L +++S + V G C+ L+ +
Sbjct: 918 DDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHF 977
Query: 420 D-AFAEYQLPEILRTPLQSLCLQIKSLRLGT---IAGFLSRALQSPELLAVQNAIEYLKI 475
+ + QLPEI R PL+ LCL+IK L + + + +R ++ P +++ + L+
Sbjct: 978 NHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFARLIEPPHADSLRASKIRLRD 1037
Query: 476 IGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMD 535
+GAL +E LT LG +LA LP++ ++GK+++ G+IF CL+P LTI A L+ + PF++P D
Sbjct: 1038 LGALTPDETLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWD 1097
Query: 536 KKDLAEAAKSQFSHDYSDHLALVRAFEGWK-DAERGL-AGYEYCWKNFLSAPSMKVIDSL 593
KK+ A K +F+ SD+LAL+RA++GW+ + G+ A Y YC +NFLS ++ + SL
Sbjct: 1098 KKEEANQKKLEFAFANSDYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASL 1157
Query: 594 RKEFLSLLKDTGLV 607
+++F LL D G V
Sbjct: 1158 KRQFTELLSDIGFV 1171
Score = 170 (64.9 bits), Expect = 1.3e-139, Sum P(4) = 1.3e-139
Identities = 43/123 (34%), Positives = 74/123 (60%)
Query: 644 KSSSLK--TMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLL 701
KS LK T DG V ++ +SVN + P+LV++EK+K + VF++D + VS L+L
Sbjct: 1244 KSDELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSMVSVYPLVL 1303
Query: 702 FGGS-----ISQGEIDGHLKMMGGYLEFFM-NPSVADMYQCIRRELDELIQNKLLNPRLN 755
FGG + +GE + + G++ F + VA++ + +R ELD+L+Q+K+ NP ++
Sbjct: 1304 FGGGQVNVQLQKGEFV--VSLDDGWIRFAAASHQVAELVKELRCELDQLLQDKIKNPSID 1361
Query: 756 IHT 758
+ T
Sbjct: 1362 LCT 1364
Score = 55 (24.4 bits), Expect = 1.3e-139, Sum P(4) = 1.3e-139
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 605 GLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ-NGKSSSLKT 650
G++D N+ + + I A++C LYP + + GK T
Sbjct: 1190 GILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTST 1236
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 634 (228.2 bits), Expect = 5.9e-138, Sum P(4) = 5.9e-138
Identities = 131/249 (52%), Positives = 181/249 (72%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R++LPA++E+ +L + ++QVV+ISG TGCGKTTQ+PQFIL+ + V +I
Sbjct: 537 ILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANI 596
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
ICTQPRRISA+SV+ERVA ER E++G +VGY++RLE +K TRLL+CTTG+LLRRL D
Sbjct: 597 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 656
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+GV+H+IVDEVHER DFLL+VLKD++S+RP L+++LMSATL+AELFS YF
Sbjct: 657 TALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCP 716
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
VI IPG T+PV FLED + +T Y L +PY M ++SK+ + R+++ A
Sbjct: 717 VITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPY-------MRSMKQISKEKLKARRNRTA 769
Query: 238 -SAVEDTLK 245
VE+ L+
Sbjct: 770 FEEVEEDLR 778
Score = 632 (227.5 bits), Expect = 5.9e-138, Sum P(4) = 5.9e-138
Identities = 138/370 (37%), Positives = 224/370 (60%)
Query: 247 ANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKER---PGAVLVFMTGWDDINSLN 303
A + S +++S + + + LIE +L +I + + PGA+LVF+ G +I L
Sbjct: 805 ARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLY 864
Query: 304 DKLQANRILGD--PTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITIND 361
++LQ+N + + R ++ H S++S EQ+ +F +P +GV KI+++TNIAETSITI+D
Sbjct: 865 EQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDD 924
Query: 362 VVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYD- 420
VV+VID GK KE YDA L +++S + V G C+ L+ Y+
Sbjct: 925 VVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNH 984
Query: 421 AFAEYQLPEILRTPLQSLCLQIKSLRLGT---IAGFLSRALQSPELLAVQNAIEYLKIIG 477
+ QLPEI R PL+ LCL+IK L + + + SR ++ P +++ + L+ +G
Sbjct: 985 QLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLG 1044
Query: 478 ALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKK 537
AL +E LT LG +LA LP++ ++GK+++ G+IF CL+P LTI A L+ + PF++P DKK
Sbjct: 1045 ALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKK 1104
Query: 538 DLAEAAKSQFSHDYSDHLALVRAFEGWK-DAERGL-AGYEYCWKNFLSAPSMKVIDSLRK 595
+ A K +F+ SD+LAL++A++GW+ + G+ A Y YC +NFLS ++ + SL++
Sbjct: 1105 EEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKR 1164
Query: 596 EFLSLLKDTG 605
+F LL D G
Sbjct: 1165 QFTELLSDIG 1174
Score = 169 (64.5 bits), Expect = 5.9e-138, Sum P(4) = 5.9e-138
Identities = 42/123 (34%), Positives = 75/123 (60%)
Query: 644 KSSSLK--TMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLL 701
KS+ LK T DG V ++ +SVN + P+L+++EK+K + VF++D + VS L+L
Sbjct: 1248 KSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVL 1307
Query: 702 FGGS-----ISQGEIDGHLKMMGGYLEFFM-NPSVADMYQCIRRELDELIQNKLLNPRLN 755
FGG + +GE + + G++ F + VA++ + +R ELD+L+Q+K+ NP ++
Sbjct: 1308 FGGGQVNVQLQRGEFV--VSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSID 1365
Query: 756 IHT 758
+ T
Sbjct: 1366 LCT 1368
Score = 54 (24.1 bits), Expect = 5.9e-138, Sum P(4) = 5.9e-138
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 605 GLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ-NGKSSSLKT 650
G++D N+ + + I A++C LYP + + GK T
Sbjct: 1194 GVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTST 1240
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 631 (227.2 bits), Expect = 7.5e-136, Sum P(4) = 7.5e-136
Identities = 139/366 (37%), Positives = 223/366 (60%)
Query: 253 SSQTRESLSCWNPDCIGFNLIEYVLCYICEKER---PGAVLVFMTGWDDINSLNDKLQAN 309
S +++S + + + LIE +L +I + + PGA+LVF+ G +I L ++LQ+N
Sbjct: 763 SKSVIKTMSVMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSN 822
Query: 310 RILGDPT--RVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVID 367
+ + R ++ H S++S EQ+ +F +P GV KI+++TNIAETSITI+DVV+VID
Sbjct: 823 SLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVID 882
Query: 368 CGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYD-AFAEYQ 426
GK KE YDA L +++S + V G C+ L+ Y+ + Q
Sbjct: 883 SGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQ 942
Query: 427 LPEILRTPLQSLCLQIKSLRLGT---IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNE 483
LPEI R PL+ LCL+IK L + + + SR ++ P + +++ + L+ +GAL +E
Sbjct: 943 LPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDE 1002
Query: 484 ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAA 543
+LT LG +LA LP++ ++GK+++LG+IF CL+P LTI A L+ + PF++P DKK+ A
Sbjct: 1003 KLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQK 1062
Query: 544 KSQFSHDYSDHLALVRAFEGWK--DAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLL 601
K +F+ SD+LAL+ A++GW+ E A Y YC +NFLS +++ + SL+++F LL
Sbjct: 1063 KLEFAFANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELL 1122
Query: 602 KDTGLV 607
D G V
Sbjct: 1123 SDIGFV 1128
Score = 618 (222.6 bits), Expect = 7.5e-136, Sum P(4) = 7.5e-136
Identities = 131/251 (52%), Positives = 178/251 (70%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R+ LPA++E+ +L +S++QVV+ISG TGCGKTTQ+PQFIL++ + V +I
Sbjct: 488 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 547
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
ICTQPRRISA+SV+ERVA ER E++G +VGY++RLE +K TRLL+CTTG+LLRRL D
Sbjct: 548 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 607
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+GVTH+IVDEVHER DFLL+VLKD++ +R L+++LMSATLDA LFS YF
Sbjct: 608 ATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCP 667
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
VI IPG +PV FLED L +T Y L +PY M +++K+ + R ++ A
Sbjct: 668 VITIPGRAFPVDQFFLEDALAVTRYVLQDGSPY-------MRSMKQIAKERLKARHNRTA 720
Query: 238 -SAVEDTLKAA 247
VE+ L+ A
Sbjct: 721 LEEVEEDLRLA 731
Score = 167 (63.8 bits), Expect = 7.5e-136, Sum P(4) = 7.5e-136
Identities = 43/129 (33%), Positives = 78/129 (60%)
Query: 637 SSIVQ-NGKSSSLK--TMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTA 693
S +V+ KS+ LK T DG V ++ +SVN + P+L+++EK+K + VF++D +
Sbjct: 1192 SGVVRLQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSM 1251
Query: 694 VSDSVLLLFGGSISQGEID-GH--LKMMGGYLEFFM-NPSVADMYQCIRRELDELIQNKL 749
VS L+LFGG ++ G + + G++ F + VA++ + +R ELD+L+Q+K+
Sbjct: 1252 VSVYPLVLFGGGQVSVQLQRGAFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKI 1311
Query: 750 LNPRLNIHT 758
NP +++ T
Sbjct: 1312 KNPSMDLCT 1320
Score = 55 (24.4 bits), Expect = 7.5e-136, Sum P(4) = 7.5e-136
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 605 GLVDCDTSICNAWGRDERFIRAVICYGLYPGISSI-VQNGK 644
G++D N + + I AV+C LYP + + GK
Sbjct: 1146 GVLDATGEEANTNAENPKLISAVLCAALYPNVVQVKTPEGK 1186
Score = 37 (18.1 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 289 VLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTC 323
V+ MTG + + N + G P RV + C
Sbjct: 515 VISGMTGCGKTTQIPQFILDNSLNGPPERVANIIC 549
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 634 (228.2 bits), Expect = 7.5e-136, Sum P(4) = 7.5e-136
Identities = 140/366 (38%), Positives = 223/366 (60%)
Query: 253 SSQTRESLSCWNPDCIGFNLIEYVLCYICEKER---PGAVLVFMTGWDDINSLNDKLQAN 309
S +++S + + + LIE +L +I + + PGAVLVF+ G +I L ++LQ+N
Sbjct: 813 SKSVIKTMSVMDFEKVNLELIEALLEWIVDGKHAYPPGAVLVFLPGLAEIKMLYEQLQSN 872
Query: 310 RILGDPT--RVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVID 367
+ + R ++ H S++S EQ+ +F +P GV KI+++TNIAETSITI+DVV+VID
Sbjct: 873 SLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVID 932
Query: 368 CGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYD-AFAEYQ 426
GK KE YDA L +++S + V G C+ L+ Y+ + Q
Sbjct: 933 SGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQ 992
Query: 427 LPEILRTPLQSLCLQIKSLRLGT---IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNE 483
LPEI R PL+ LCL+IK L + + + SR ++ P + +++ + L+ +GAL +E
Sbjct: 993 LPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDE 1052
Query: 484 ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAA 543
+LT LG +LA LP++ ++GK+++LG+IF CL+P LTI A L+ + PF++P DKK+ A
Sbjct: 1053 KLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQK 1112
Query: 544 KSQFSHDYSDHLALVRAFEGWK--DAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLL 601
K +F+ SD+LAL+ A++GW+ E A Y YC +NFLS +++ + SL+++F LL
Sbjct: 1113 KLEFAFANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELL 1172
Query: 602 KDTGLV 607
D G V
Sbjct: 1173 SDIGFV 1178
Score = 615 (221.5 bits), Expect = 7.5e-136, Sum P(4) = 7.5e-136
Identities = 125/225 (55%), Positives = 166/225 (73%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R+ LPA++E+ +L +S++QVV+ISG TGCGKTTQ+PQFIL++ + V +I
Sbjct: 538 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 597
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
ICTQPRRISA+SV+ERVA ER E++G +VGY++RLE +K TRLL+CTTG+LLRRL D
Sbjct: 598 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 657
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+GVTH+IVDEVHER DFLL+VLKD++ +R L+++LMSATLDA LFS YF
Sbjct: 658 ATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCP 717
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYRL---TPY-NQIDDYGQEKM 221
VI IPG +PV FLED L +T Y L +PY + +EK+
Sbjct: 718 VITIPGRAFPVDQFFLEDALAVTRYVLQDGSPYMRSMKQIAKEKL 762
Score = 165 (63.1 bits), Expect = 7.5e-136, Sum P(4) = 7.5e-136
Identities = 42/127 (33%), Positives = 77/127 (60%)
Query: 637 SSIVQ-NGKSSSLK--TMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTA 693
S +V+ KS+ LK T DG V ++ +SVN + P+L+++EK+K + VF++D +
Sbjct: 1242 SGVVRLQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSM 1301
Query: 694 VSDSVLLLFGGSISQGEID-GH--LKMMGGYLEFFM-NPSVADMYQCIRRELDELIQNKL 749
VS L+LFGG ++ G + + G++ F + VA++ + +R ELD+L+Q+K+
Sbjct: 1302 VSVYPLVLFGGGQVNVQLQRGAFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKI 1361
Query: 750 LNPRLNI 756
NP +++
Sbjct: 1362 KNPSMDL 1368
Score = 55 (24.4 bits), Expect = 7.5e-136, Sum P(4) = 7.5e-136
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 605 GLVDCDTSICNAWGRDERFIRAVICYGLYPGISSI-VQNGK 644
G++D N + + I AV+C LYP + + GK
Sbjct: 1196 GVLDATGEEANTNAENPKLISAVLCAALYPNVVQVKTPEGK 1236
Score = 37 (18.1 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 289 VLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTC 323
V+ MTG + + N + G P RV + C
Sbjct: 565 VISGMTGCGKTTQIPQFILDNSLNGPPERVANIIC 599
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 631 (227.2 bits), Expect = 1.1e-135, Sum P(4) = 1.1e-135
Identities = 139/366 (37%), Positives = 223/366 (60%)
Query: 253 SSQTRESLSCWNPDCIGFNLIEYVLCYICEKER---PGAVLVFMTGWDDINSLNDKLQAN 309
S +++S + + + LIE +L +I + + PGA+LVF+ G +I L ++LQ+N
Sbjct: 816 SKSVIKTMSVMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSN 875
Query: 310 RILGDPT--RVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVID 367
+ + R ++ H S++S EQ+ +F +P GV KI+++TNIAETSITI+DVV+VID
Sbjct: 876 SLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVID 935
Query: 368 CGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYD-AFAEYQ 426
GK KE YDA L +++S + V G C+ L+ Y+ + Q
Sbjct: 936 SGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQ 995
Query: 427 LPEILRTPLQSLCLQIKSLRLGT---IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNE 483
LPEI R PL+ LCL+IK L + + + SR ++ P + +++ + L+ +GAL +E
Sbjct: 996 LPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDE 1055
Query: 484 ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAA 543
+LT LG +LA LP++ ++GK+++LG+IF CL+P LTI A L+ + PF++P DKK+ A
Sbjct: 1056 KLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQK 1115
Query: 544 KSQFSHDYSDHLALVRAFEGWK--DAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLL 601
K +F+ SD+LAL+ A++GW+ E A Y YC +NFLS +++ + SL+++F LL
Sbjct: 1116 KLEFAFANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELL 1175
Query: 602 KDTGLV 607
D G V
Sbjct: 1176 SDIGFV 1181
Score = 618 (222.6 bits), Expect = 1.1e-135, Sum P(4) = 1.1e-135
Identities = 131/251 (52%), Positives = 178/251 (70%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R+ LPA++E+ +L +S++QVV+ISG TGCGKTTQ+PQFIL++ + V +I
Sbjct: 541 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 600
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
ICTQPRRISA+SV+ERVA ER E++G +VGY++RLE +K TRLL+CTTG+LLRRL D
Sbjct: 601 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 660
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+GVTH+IVDEVHER DFLL+VLKD++ +R L+++LMSATLDA LFS YF
Sbjct: 661 ATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCP 720
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
VI IPG +PV FLED L +T Y L +PY M +++K+ + R ++ A
Sbjct: 721 VITIPGRAFPVDQFFLEDALAVTRYVLQDGSPY-------MRSMKQIAKERLKARHNRTA 773
Query: 238 -SAVEDTLKAA 247
VE+ L+ A
Sbjct: 774 LEEVEEDLRLA 784
Score = 167 (63.8 bits), Expect = 1.1e-135, Sum P(4) = 1.1e-135
Identities = 43/129 (33%), Positives = 78/129 (60%)
Query: 637 SSIVQ-NGKSSSLK--TMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTA 693
S +V+ KS+ LK T DG V ++ +SVN + P+L+++EK+K + VF++D +
Sbjct: 1245 SGVVRLQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSM 1304
Query: 694 VSDSVLLLFGGSISQGEID-GH--LKMMGGYLEFFM-NPSVADMYQCIRRELDELIQNKL 749
VS L+LFGG ++ G + + G++ F + VA++ + +R ELD+L+Q+K+
Sbjct: 1305 VSVYPLVLFGGGQVSVQLQRGAFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKI 1364
Query: 750 LNPRLNIHT 758
NP +++ T
Sbjct: 1365 KNPSMDLCT 1373
Score = 55 (24.4 bits), Expect = 1.1e-135, Sum P(4) = 1.1e-135
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 605 GLVDCDTSICNAWGRDERFIRAVICYGLYPGISSI-VQNGK 644
G++D N + + I AV+C LYP + + GK
Sbjct: 1199 GVLDATGEEANTNAENPKLISAVLCAALYPNVVQVKTPEGK 1239
Score = 37 (18.1 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 289 VLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTC 323
V+ MTG + + N + G P RV + C
Sbjct: 568 VISGMTGCGKTTQIPQFILDNSLNGPPERVANIIC 602
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 758 (271.9 bits), Expect = 3.8e-135, Sum P(2) = 3.8e-135
Identities = 186/547 (34%), Positives = 291/547 (53%)
Query: 187 FTYPVRTHFLEDILDMTGY-RLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVEDTLK 245
+ Y ++ +L ++ G R++ + +G + W + K ++A A E+ L+
Sbjct: 443 YNYQHQSTWLTPLMVFAGKGRISDVCMLLSFGAD--WSL-KSKDGMTALELAEA-ENQLE 498
Query: 246 AA--------NFNEYSSQTRESLSCW----NPDCIGFNLIEYVLCYICEKERPGAVLVFM 293
AA N S Q ++ L + NP+ + +LI+ ++ IC GA+LVF+
Sbjct: 499 AAQIIREHADNSQSNSQQGQQLLDKYMATINPEQVDVSLIQQLMRKICGDSEDGAILVFL 558
Query: 294 TGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
GWDDIN +L N D + ++ H + + EQ+ +F+ P G RKIVLATNIA
Sbjct: 559 PGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIA 618
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRL 413
E+++TI+DVV+VID G+ KE SYD NN S L SW+S + QPG CY L
Sbjct: 619 ESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHL 678
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAG-FLSRALQSPELLAVQNAIEY 472
Y R + ++++PEI R P++ LCLQ+K L FL + L P ++ NA+
Sbjct: 679 YSRLRAASMPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQKLLDPPVDQSIANALSI 738
Query: 473 LKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLA 532
L+ IGAL EELT LG+ LP+ P + KML + NCL+P LT+ ++PF
Sbjct: 739 LQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPALTLACAADYKEPFTM 798
Query: 533 PMD--KKDLAEAAKSQFSH---DYSDHLALVRAFEGWKDAE-RGLAGYEYCWKNFLSAPS 586
PM ++ A AAK + + SDHLA+V AFE WK+A+ RGL+ E+C + F+S +
Sbjct: 799 PMSPVERQKAAAAKLELASLCGGDSDHLAVVAAFECWKNAKGRGLSA-EFCSQYFVSPSA 857
Query: 587 MKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ---NG 643
MK++D +R + S LK G++ D S C+ RD +RAV+ GLYP + + N
Sbjct: 858 MKMLDQMRSQLESELKRHGIIPNDISSCSQNSRDPGILRAVLAVGLYPMVGRLCPAFGNN 917
Query: 644 KSSSLKTMEDGQVFLYS--NSVNARESEIPYPWLVFNEKMKVNS-VFLKDSTAVSDSVLL 700
+ + ++T +V ++S N+ N + LVF+E + + + +++ T D LL
Sbjct: 918 RRTIVETASGAKVRVHSLSNNFNLSSKKYDESLLVFDEITRGDGGMHIRNCTVARDLPLL 977
Query: 701 LFGGSIS 707
L I+
Sbjct: 978 LISTEIA 984
Score = 604 (217.7 bits), Expect = 3.8e-135, Sum P(2) = 3.8e-135
Identities = 115/204 (56%), Positives = 153/204 (75%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
+ R LP K+ + +A+ NQV++ISGETGCGKTTQVPQ++L+ +S R C I+C
Sbjct: 182 KLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKR-ETCKIVC 240
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDR- 121
TQPRRISAMSVSER++ ERGE +GE++GYKVRL+ GR + ++FCT GILLR +LV +
Sbjct: 241 TQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLR-VLVGKG 299
Query: 122 ---NLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG 178
++ +TH+IVDE+HER DF+L +++DLL P LRL+LMSATLDAE FS YFGG
Sbjct: 300 SVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGG 359
Query: 179 ATVINIPGFTYPVRTHFLEDILDM 202
V+ +PGFTYPVRT +LED+L +
Sbjct: 360 CPVVRVPGFTYPVRTLYLEDVLSI 383
Score = 37 (18.1 bits), Expect = 4.4e-55, Sum P(2) = 4.4e-55
Identities = 8/29 (27%), Positives = 19/29 (65%)
Query: 723 EFFMNPSVADMYQCIRRELD-ELIQNKLL 750
++F++PS M +R +L+ EL ++ ++
Sbjct: 850 QYFVSPSAMKMLDQMRSQLESELKRHGII 878
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 1302 (463.4 bits), Expect = 7.9e-133, P = 7.9e-133
Identities = 304/811 (37%), Positives = 474/811 (58%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGA-VCS 59
+L+ R+ LP +K ++ ++ + +++VV+++GETG GK+TQVP F+LE + GA C+
Sbjct: 564 LLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGARKCN 623
Query: 60 IICTQPRRISAMSVSERVASERGEKLGES-----VGYKVRLEGMKGRDTRLLFCTTGILL 114
I+CTQPRRISA+S++ RV E G + G GY++R+E TRLL+CTTG+LL
Sbjct: 624 IVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLL 683
Query: 115 RRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSS 174
R+L D L V+HVIVDEVHER + DFLL++LK++L +R +L L+LMSAT+D++ FS+
Sbjct: 684 RKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFST 743
Query: 175 YFGGATVINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQ-IDDYGQEKMWKMSKQAPR 230
YF ++ I G +YPV LEDI++ TG+ L + Y Q + +E ++ +A
Sbjct: 744 YFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGG 803
Query: 231 KRKSQ----IASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKER- 285
+K Q + S L + +YSS+T+ ++ NP I +LI +L Y+ + +
Sbjct: 804 VKKYQEYIPVQSGASPELNPF-YQKYSSRTQHAILYMNPHKINLDLILELLVYLDKSPQF 862
Query: 286 ---PGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESG 342
GAVL+F+ G I L D L ++R R ++ H +++ +Q F P G
Sbjct: 863 RNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYSE-RYQVIALHSVLSTQDQAAAFMFPPPG 921
Query: 343 VRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXX 402
VRKIVLATNIAET ITI DVVFVID G+ KE Y + S L+ +++S S
Sbjct: 922 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRA 981
Query: 403 XXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V+ G C+RLY R ++ F +Y +PEILR PL+ LCL I LG+ FLS+AL P+
Sbjct: 982 GRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQ 1041
Query: 463 LLAVQNAIEYLKIIGALDHNE-ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIV 521
L + NA+ L+ IGA + NE +LT LGQ+LA LP+ K+GKMLI GAIF CLEPV T+
Sbjct: 1042 LQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLA 1101
Query: 522 AGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAER--GLAG-YEYCW 578
A ++ + PF+ P+ +KD A+ AKS + SDHL + A+ GWK A++ G YC
Sbjct: 1102 AVMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQ 1161
Query: 579 KNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAW-GR---------DERFIRAVI 628
+NFL+ S+ ++ +++E + L+K G S +W GR D ++AV+
Sbjct: 1162 RNFLNRTSLLTLEDVKQELMKLVKAAGF-----SSSPSWEGRKGPQTLSFQDIALLKAVL 1216
Query: 629 CYGLYPGISSIVQNGK---SSSLKTMED---GQVFLYSNSVNARESEIPYPWLVFNEKMK 682
GLY + I+ + L M + G+ ++ +SVN R+ + Y WL++ EK++
Sbjct: 1217 AAGLYDSVGKIMCTKSVDVTEKLACMVETAQGKAQVHPSSVN-RDLQT-YGWLLYQEKVR 1274
Query: 683 VNSVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELD 742
V+L+++T ++ +LLFGG I + L + G++ F +A +++ +R +D
Sbjct: 1275 YTRVYLRETTLITPFPVLLFGGDIEVQHRE-RLLSVDGWIYFQAPVKIAVIFKQLRVLID 1333
Query: 743 ELIQNKLLNPRLNIHTHEDLLAAVRLLVAED 773
+++ KL NP++++ + L L+ E+
Sbjct: 1334 SVLRKKLENPKMSLENDKILQIITELIKTEN 1364
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 1295 (460.9 bits), Expect = 4.4e-132, P = 4.4e-132
Identities = 304/809 (37%), Positives = 464/809 (57%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAV-CS 59
+L+ R+ LP +K ++ ++ + +++VV+++GETG GK+TQVP F+LE + + G C+
Sbjct: 562 LLKERQQLPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTTKCN 621
Query: 60 IICTQPRRISAMSVSERVASERGEKLGES-----VGYKVRLEGMKGRDTRLLFCTTGILL 114
I+CTQPRRISA+S++ RV E G + G GY++R+E TRLL+CTTG+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 115 RRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSS 174
R+L D L V+HVIVDEVHER + DFLLI+LK++L +R +L L+LMSAT+D E FS+
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDCEKFST 741
Query: 175 YFGGATVINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQ-IDDYGQEKMWKMSKQAPR 230
YF ++ I G +YPV LEDI++ TG+ L + Y Q + +E ++ +A
Sbjct: 742 YFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITINVTTKAGG 801
Query: 231 KRKSQIASAVEDTLKA-AN--FNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICE----K 283
+K Q V+ A N + +YSS+T+ ++ NP I +LI +L Y+ K
Sbjct: 802 IKKYQEYIPVQTGTSADLNPFYQKYSSRTQHAILYMNPHKINLDLILELLTYLDRSPQFK 861
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQANR-ILGDPTRVLLLTCHGSMASSEQRLIFDEPESG 342
GAVL+F+ G I L D L +R + +V+ L H +++ +Q F P G
Sbjct: 862 NVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIAL--HSILSTQDQAAAFTLPPQG 919
Query: 343 VRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXX 402
VRKIVLATNIAET ITI DVVFVID G+ KE Y + S L+ +++S S
Sbjct: 920 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRA 979
Query: 403 XXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V+ G C+R+Y R ++ F +Y +PEILR PL+ LCL I LG+ FLS+AL P+
Sbjct: 980 GRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQ 1039
Query: 463 LLAVQNAIEYLKIIGALDHNE-ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIV 521
L + NA+ L+ IGA + NE +LT LGQ+LA LP+ K+GKMLI GAIF CL+PV T+
Sbjct: 1040 LQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLA 1099
Query: 522 AGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYE----YC 577
A ++ + PF+ P+ +KD A+ AKS + SDHL + A+ GWK A R GY YC
Sbjct: 1100 AVMTEKSPFITPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKA-RQEGGYRSEIAYC 1158
Query: 578 WKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDER--------FIRAVIC 629
KNFL+ S+ ++ +++E + L+K G + TS R + ++AV+
Sbjct: 1159 RKNFLNRTSLLTLEDVKQELIKLVKAAGFLSSTTSNSFEGNRATQTLSFQEIALLKAVLT 1218
Query: 630 YGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIP-----YPWLVFNEKMKVN 684
GLY + I+ KS + V S + Y WL++ EK++
Sbjct: 1219 AGLYDNVGKIIYT-KSVDITEKLACIVETAQGKAQVHPSSVNRDLQIYGWLLYQEKIRYA 1277
Query: 685 SVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDEL 744
V+L+++T ++ +LLFGG I + L + G++ F +A +++ +R +D +
Sbjct: 1278 RVYLRETTLITPFPVLLFGGDIEVQHRE-RLISVDGWIYFQAPVKIAVIFKQLRVLIDSV 1336
Query: 745 IQNKLLNPRLNIHTHEDLLAAVRLLVAED 773
++ KL NP++++ + L L+ E+
Sbjct: 1337 LRKKLENPKMSLENDKILQIITELIKTEN 1365
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 1295 (460.9 bits), Expect = 4.4e-132, P = 4.4e-132
Identities = 304/812 (37%), Positives = 468/812 (57%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRG-AVCS 59
+L+ R+ LP +K +N ++ + +++VV+++GETG GK+TQVP F+LE + + G + C+
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 60 IICTQPRRISAMSVSERVASERGEKLGES-----VGYKVRLEGMKGRDTRLLFCTTGILL 114
I+CTQPRRISA+S++ RV E G + G GY++R+E TRLL+CTTG+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 115 RRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSS 174
R+L D L V+HVIVDEVHER + DFLLI+LK++L +R +L L+LMSAT+D+E FS+
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFST 741
Query: 175 YFGGATVINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQ-IDDYGQEKMWKMSKQAPR 230
YF ++ I G +YPV LEDI++ TG+ L + Y Q + +E ++ +A
Sbjct: 742 YFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGG 801
Query: 231 KRKSQIASAVEDTLKAANFN----EYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKER- 285
+K Q V +T +A+ N +YS++T+ ++ NP I +LI +L Y+ +
Sbjct: 802 IKKHQEYIPV-NTGSSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLIYLDRSPQF 860
Query: 286 ---PGAVLVFMTGWDDINSLNDKLQANR-ILGDPTRVLLLTCHGSMASSEQRLIFDEPES 341
GAVL+F+ G I L D L +R + +V+ L H +++ +Q F P
Sbjct: 861 RNIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIAL--HSILSTQDQAAAFTLPPP 918
Query: 342 GVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXX 401
GVRKIVLATNIAET ITI DVVFVID G+ KE Y + S L+ +++S S
Sbjct: 919 GVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGR 978
Query: 402 XXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSP 461
V+ G C+R+Y R ++ F +Y +PEILR PL+ LCL I LG+ FLS+AL P
Sbjct: 979 AGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPP 1038
Query: 462 ELLAVQNAIEYLKIIGALDHNEE-LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTI 520
+L + NA+ L+ IGA + NE LT LGQ+LA LP+ K+GKMLI GAIF CL+PV T+
Sbjct: 1039 QLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1098
Query: 521 VAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYE----Y 576
A ++ + PF P+ +KD A+ AKS + SDHL + A+ GWK A R GY Y
Sbjct: 1099 AAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKA-RQEGGYRSEIAY 1157
Query: 577 CWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDER----------FIRA 626
C +NFL+ S+ ++ +++E + L+K G TS N W + ++A
Sbjct: 1158 CRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTS--NDWEENRASQTLPFQEIALLKA 1215
Query: 627 VICYGLYPGISSIVQNGKSSSLKT-----MEDGQVFLYSNSVNARESEIPYPWLVFNEKM 681
V+ GLY + I+ KS + +E Q + + Y WL++ EK+
Sbjct: 1216 VLAAGLYDNVGKIIYT-KSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTYGWLLYQEKV 1274
Query: 682 KVNSVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRREL 741
+ V+L+++T ++ +LLFGG I + L + G++ F +A +++ +R +
Sbjct: 1275 RYTRVYLRETTLITPFPVLLFGGDIEVQHRE-RLLSVDGWIYFQAPVKIAVIFKQLRVLI 1333
Query: 742 DELIQNKLLNPRLNIHTHEDLLAAVRLLVAED 773
D +++ KL NP++++ + L L+ E+
Sbjct: 1334 DSVLRKKLENPKMSLENDKILQIITELIKTEN 1365
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 729 (261.7 bits), Expect = 5.4e-131, Sum P(2) = 5.4e-131
Identities = 168/497 (33%), Positives = 268/497 (53%)
Query: 228 APRKRKSQIASAVEDTLKAANFNEYSSQTRESLSCW----NPDCIGFNLIEYVLCYICEK 283
A ++ + + A + + A N S Q ++ L + P+ + LI ++ IC
Sbjct: 515 AEKENQFETAQIIRE--HAGNIQSNSQQAQDLLDKYMATIKPEEVDVGLIVKLMKKICSD 572
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGV 343
+ GA+LVF+ GW++I+ +KL +R + ++L H + + EQ+ +F+ P G
Sbjct: 573 SKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGC 632
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RKIVLATNIAE+++TI+DVV+VID G+ KE SYD N+ S L SW+S +
Sbjct: 633 RKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAG 692
Query: 404 XVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLG-TIAGFLSRALQSPE 462
Q G CY LY + + EY++PE++R P+ LCLQ+K L + FL + + P
Sbjct: 693 RCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQKLMDPPV 752
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+++NA+ LK IGAL EELT LGQ LP+ P++ KM+ + NCL+P L +
Sbjct: 753 AQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALILAC 812
Query: 523 GLSVRDPF---LAPMDKKDLAEAAKSQFSH---DYSDHLALVRAFEGWKDAERGLAGYEY 576
+DPF L+P D+K A AAK + + D+SDHLA V AF+ WK+A+ E+
Sbjct: 813 AADEKDPFTMPLSPGDRKKAA-AAKHELASLYGDHSDHLATVAAFQCWKNAKASGQAKEF 871
Query: 577 CWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGI 636
C K F+S MK +D L ++ L G++ +S C+ D +RAVI GLYP +
Sbjct: 872 CSKYFISQVVMKRLDDLCRKLQGELNRHGVIPSSSSNCSLNAHDPGILRAVIAVGLYPML 931
Query: 637 SSIV---QNGKSSSLKTMEDGQVFL--YSNSVNARESEIPYPWLVFNEKMKVN-SVFLKD 690
+ +N S ++T+ +V + SN+V+ ++ +VF+E + + V ++
Sbjct: 932 GRMCPLSKNRTRSVIETIAGAKVRVPSLSNNVDMSSTKFDEALIVFDEITRGDWGVVIRS 991
Query: 691 STAVSDSVLLLFGGSIS 707
T + +LLF I+
Sbjct: 992 CTVLPTIPVLLFSREIA 1008
Score = 600 (216.3 bits), Expect = 5.4e-131, Sum P(2) = 5.4e-131
Identities = 115/205 (56%), Positives = 155/205 (75%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+ E R LP ++ +++A+ NQVV+I+GETGCGKTTQVPQ++L+ S + A C I
Sbjct: 210 IFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEA-CKI 268
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLL-- 118
ICTQPRRISA+SVS+R++ ERGE +G +VGYKVRL+ GR++ ++FCT GILLR L+
Sbjct: 269 ICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGK 328
Query: 119 -VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG 177
V+ ++ +TH+IVDE+HER DF+L++L+DLL P LRL+LMSATLDAE FS YFG
Sbjct: 329 GVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFG 388
Query: 178 GATVINIPGFTYPVRTHFLEDILDM 202
G V+ +PGFTYPVRT FL+D L +
Sbjct: 389 GCPVVRVPGFTYPVRTFFLDDALSV 413
Score = 46 (21.3 bits), Expect = 3.9e-55, Sum P(2) = 3.9e-55
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 573 GYEYCWKNFLSAPSMKVIDSLRKE-FLSLLK----DTGLVDCDTSICNAWGRDE 621
G+ Y + F ++ V++S + LS +K D V D +I AW DE
Sbjct: 397 GFTYPVRTFFLDDALSVLNSDKNSHLLSAVKRDFKDEDKVSLDEAIDLAWTNDE 450
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 1284 (457.0 bits), Expect = 6.4e-131, P = 6.4e-131
Identities = 301/806 (37%), Positives = 471/806 (58%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGA-VCS 59
+L+ R+ LP +K + ++ + +++VV+++GETG GK+TQVP F+LE + + GA C+
Sbjct: 565 LLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNDCGARKCN 624
Query: 60 IICTQPRRISAMSVSERVASERGEKLGES-----VGYKVRLEGMKGRDTRLLFCTTGILL 114
I+CTQPRRISA+S++ RV E G + G GY++R+E TRLL+CTTG+LL
Sbjct: 625 IVCTQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLL 684
Query: 115 RRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSS 174
R+L D L V+HVIVDEVHER + DFLL++LK++L +R +L L+LMSAT+D++ FS+
Sbjct: 685 RKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFST 744
Query: 175 YFGGATVINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQ-IDDYGQEKMWKMSKQAPR 230
YF ++ I G +YPV LEDI++ TG+ L + Y Q + +E ++ +A
Sbjct: 745 YFTHCPILRISGRSYPVEVFHLEDIVEETGFILEKDSEYCQKFLEEEEEITINVTSKAGG 804
Query: 231 KRKSQIASAVEDTLK---AANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKER-- 285
+K Q V+ + + +YSS+T+ ++ NP I +LI +L Y+ + +
Sbjct: 805 IKKYQECIPVQSGASPELSPFYQKYSSRTQYAVLYMNPHKINLDLILELLVYLDKSPQFR 864
Query: 286 --PGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGV 343
GAVL+F+ G I L D L +R R L+ H +++ +Q F P GV
Sbjct: 865 NIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSE-RYQLIALHSVLSTQDQAAAFMLPPPGV 923
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RKIVLATNIAET ITI DVVFVID G+ KE Y + S L+ +++S S
Sbjct: 924 RKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAG 983
Query: 404 XVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
V+ G C+RLY R ++ F EY +PEILR PL+ LCL I LG+ FLS+AL P+
Sbjct: 984 RVRDGFCFRLYTRERFEGFLEYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQP 1043
Query: 464 LAVQNAIEYLKIIGALDHNE-ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ NA+ L+ IGA + +E +LT LGQ+LA LP+ K+GKMLI GAIF CLEPV T+ A
Sbjct: 1044 QVISNAMNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAA 1103
Query: 523 GLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAER--GLAG-YEYCWK 579
++ + PF+ P+ +KD A+ AKS + SDHL + A+ GWK A++ G YC +
Sbjct: 1104 VMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQR 1163
Query: 580 NFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWG------RDERFIRAVICYGLY 633
NFL+ S+ ++ +++E + L++ G TS G +D ++AV+ GLY
Sbjct: 1164 NFLNRTSLLTLEDVKQELMKLVRAAGF-SSSTSWEGKKGPQALSFQDIALLKAVLAAGLY 1222
Query: 634 PGISSIVQNGK---SSSLKTMED---GQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVF 687
+ I+ + L M + G+ ++ +SVN R+ + Y WL++ EK++ V+
Sbjct: 1223 DSVGKIMCTKSVDVTEKLACMVETAQGKAQVHPSSVN-RDLQT-YGWLLYQEKVRYARVY 1280
Query: 688 LKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQN 747
L+++T ++ +LLFGG I + L + G++ F +A +++ +R +D +++
Sbjct: 1281 LRETTLITPFPVLLFGGDIEVQHRE-RLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRK 1339
Query: 748 KLLNPRLNIHTHEDLLAAVRLLVAED 773
KL NP++++ + L L+ E+
Sbjct: 1340 KLENPKMSLENDKILQIITELIKTEN 1365
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 1280 (455.6 bits), Expect = 1.7e-130, P = 1.7e-130
Identities = 298/805 (37%), Positives = 456/805 (56%)
Query: 2 LEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSII 61
L+ R+ LP +K ++ ++ + +++VV+++GETG GK+TQVP F+LE + C+I+
Sbjct: 568 LKERQELPVFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLDEGTRKCNIV 627
Query: 62 CTQPRRISAMSVSERVASERGEKLGES-----VGYKVRLEGMKGRDTRLLFCTTGILLRR 116
CTQPRRISA+S++ RV E G + G GY++R+E G TRLL+CTTG+LLR+
Sbjct: 628 CTQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRLLYCTTGVLLRK 687
Query: 117 LLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYF 176
L D L ++HVIVDEVHER ++ DFLL++LK++L +R +L L+LMSAT+D+E FSSYF
Sbjct: 688 LQEDGLLSSISHVIVDEVHERSVHSDFLLVILKEILHKRSDLHLILMSATVDSEKFSSYF 747
Query: 177 GGATVINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQ-IDDYGQEKMWKMSKQAPRKR 232
++ I G +YPV +ED+++ TGY L + Y Q + +E M ++ +
Sbjct: 748 AHCPILRISGRSYPVEVFHVEDVIEATGYVLEKDSEYCQKFLEEEEEIMINVTTKGGGTT 807
Query: 233 KSQIASAVEDTLK---AANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICE----KER 285
K Q V+ + + +YSS+T++++ NP I LI +L Y+ K
Sbjct: 808 KYQEYVPVQSGSGIDLSPYYQKYSSRTQQAVFYMNPYKINLELILELLAYLDRSPQFKNT 867
Query: 286 PGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRK 345
GAVL+F+ G I L D + +R R L+ H +++ +Q F P GVRK
Sbjct: 868 EGAVLIFLPGLAHIQQLYDLISTDRRFSLCDRHRLIALHSVLSTQDQAAAFTVPPLGVRK 927
Query: 346 IVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXV 405
IVLATNIAET ITI DVVFVID G+ KE Y + S L +++S S V
Sbjct: 928 IVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASALQRQGRAGRV 987
Query: 406 QPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLA 465
+ G C+R+Y R +++F EY +PEILR PL+ LCL I LG+ FLSRAL P+
Sbjct: 988 RDGFCFRMYTRDRFESFMEYSVPEILRVPLEELCLHIMKCNLGSPEDFLSRALDPPQPQV 1047
Query: 466 VQNAIEYLKIIGALDHNE-ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGL 524
+ NA+ L+ IGA NE +LT LGQ+LA LP+ K+GKMLI GAIF CL+PV T+ A +
Sbjct: 1048 IGNAMNLLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVM 1107
Query: 525 SVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDA--ERG-LAGYEYCWKNF 581
+ + PF P+ +KD A+ AKS + SDHL + A+ GWK A E G A YC +NF
Sbjct: 1108 TEKSPFTTPIGRKDEADLAKSSIALAVSDHLTIYNAYLGWKKARQEGGHRAEMTYCRRNF 1167
Query: 582 LSAPSMKVIDSLRKEFLSLLKDTGLVDCDTS--ICNAWGRDE------RFIRAVICYGLY 633
L+ S+ ++ +++E + L++ G T + G ++AV+ GLY
Sbjct: 1168 LNRTSLLTLEDVKQELIKLVRAAGFTAPTTQHRLDGNGGTQSLSLHEIALLKAVLTAGLY 1227
Query: 634 PGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIP-----YPWLVFNEKMKVNSVFL 688
+ I+ KS + V S + + WL++ EK++ V+L
Sbjct: 1228 DNVGKIMYT-KSVDITEKLACLVETAQGKAQVHPSSVNRDLQVHGWLLYQEKVRYAKVYL 1286
Query: 689 KDSTAVSDSVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNK 748
+++T +S +LLFGG I + HL + G++ F +A +++ +R ++ ++Q K
Sbjct: 1287 RETTLISPFPILLFGGDIEVQHRE-HLLTVDGWIHFQAPVKIAVIFKQLRVLIESVLQKK 1345
Query: 749 LLNPRLNIHTHEDLLAAVRLLVAED 773
L NP++++ + L L+ E+
Sbjct: 1346 LENPKMSLEDDKVLHIIKELIKTEN 1370
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 1279 (455.3 bits), Expect = 2.2e-130, P = 2.2e-130
Identities = 299/808 (37%), Positives = 464/808 (57%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSV-RGAVCS 59
+L+ R+ LP +K ++ ++ + +++VV+++GETG GK+TQVP F+LE + + + C+
Sbjct: 565 LLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCN 624
Query: 60 IICTQPRRISAMSVSERVASERGEKLGES-----VGYKVRLEGMKGRDTRLLFCTTGILL 114
I+CTQPRRISA+S++ RV E G + G GY++R+E TRLL+CTTG+LL
Sbjct: 625 IVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLL 684
Query: 115 RRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSS 174
R+L D L V+HVIVDEVHER + DFLLI+LK++L +R +L L+LMSAT+D+E FS+
Sbjct: 685 RKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFST 744
Query: 175 YFGGATVINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQ-IDDYGQEKMWKMSKQAPR 230
YF ++ I G +YPV LEDI++ TG+ L + Y Q + +E ++ +A
Sbjct: 745 YFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEVTINVTSKAGG 804
Query: 231 KRKSQIASAVEDTLKA-AN--FNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKER-- 285
+K Q V+ A N + +YSS+T+ ++ NP I +LI +L Y+ + +
Sbjct: 805 IKKYQEYIPVQTGAHADLNPFYQKYSSRTQHAILYMNPHKINLDLILELLAYLDKSPQFR 864
Query: 286 --PGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGV 343
GAVL+F+ G I L D L +R R ++ H +++ +Q F P GV
Sbjct: 865 NIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSE-RYKVIALHSILSTQDQAAAFTLPPPGV 923
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RKIVLATNIAET ITI DVVFVID G+ KE Y + S L+ +++S S
Sbjct: 924 RKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAG 983
Query: 404 XVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
V+ G C+R+Y R ++ F +Y +PEILR PL+ LCL I LG+ FLS+AL P+L
Sbjct: 984 RVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQL 1043
Query: 464 LAVQNAIEYLKIIGALDHNE-ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ NA+ L+ IGA + NE +LT LGQ+LA LP+ K+GKMLI GAIF CL+PV T+ A
Sbjct: 1044 QVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAA 1103
Query: 523 GLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYE----YCW 578
++ + PF P+ +KD A+ AKS + SDHL + A+ GWK A R GY YC
Sbjct: 1104 VMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKA-RQEGGYRSEITYCR 1162
Query: 579 KNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDER--------FIRAVICY 630
+NFL+ S+ ++ +++E + L+K G TS R + ++AV+
Sbjct: 1163 RNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTSTSWEGNRASQTLSFQEIALLKAVLVA 1222
Query: 631 GLYPGISSIVQNGKSSSLKT-----MEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNS 685
GLY + I+ KS + +E Q + + + WL++ EK++
Sbjct: 1223 GLYDNVGKIIYT-KSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTHGWLLYQEKIRYAR 1281
Query: 686 VFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELI 745
V+L+++T ++ +LLFGG I + L + G++ F +A +++ +R +D ++
Sbjct: 1282 VYLRETTLITPFPVLLFGGDIEVQHRE-RLLSIDGWIYFQAPVKIAVIFKQLRVLIDSVL 1340
Query: 746 QNKLLNPRLNIHTHEDLLAAVRLLVAED 773
+ KL NP++++ + L L+ E+
Sbjct: 1341 RKKLENPKMSLENDKILQIITELIKTEN 1368
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 1247 (444.0 bits), Expect = 5.3e-127, P = 5.3e-127
Identities = 302/791 (38%), Positives = 447/791 (56%)
Query: 2 LEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSII 61
LEFR LP ++ +LTAI+ N VVII G TGCGKTTQ+ Q+IL+ I S +G +I
Sbjct: 378 LEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYANIY 437
Query: 62 CTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDT-RLLFCTTGILLRRLLVD 120
TQPRRISA+SV+ERVA ER E+LG++VGY VR E + R +LFCT G+LLR+L +
Sbjct: 438 VTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKL--E 495
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+GV+H+IVDE+HER +N DFLL++L+D++ P+L ++LMSAT+D FS YFG
Sbjct: 496 AGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICP 555
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAV 240
V+ +PG +PV+ FLEDI+ MT + P + + K + +Q + K +
Sbjct: 556 VLEVPGRAFPVQQFFLEDIIQMTDF--VP--SAESRRKRKEVEDEEQLLSEDKDE----A 607
Query: 241 EDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDIN 300
E ++YS +TR +++ + + F L+E +L +I K PGA+LVF+ GW+ I
Sbjct: 608 EINYNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIF 667
Query: 301 SLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITIN 360
+L LQ I GD ++ +L CH + EQR +F+ GV KI+L+TNIAETSITI+
Sbjct: 668 ALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITID 727
Query: 361 DVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYD 420
D+VFVID KA+ + + NN + W S + V+PG C+ L R +
Sbjct: 728 DIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQ 787
Query: 421 AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALD 480
A + PE+ RTPL + L IK LRLG+I FLS+AL+ P + AV A L+ + LD
Sbjct: 788 ALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLD 847
Query: 481 HNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLS--VRDPFLAPMDKKD 538
N+ELT LG+ LA LP+EP+LGKM++LGA+F C + ++ I+A S + F + ++
Sbjct: 848 ANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCAD-LMAIMASYSSTFSEVFSLDIGQRR 906
Query: 539 LAEAAKSQFSHDYSDHLALVRAFEGWK-DAERGL-AGYEYC-WKNFLSAPSMKVIDSLRK 595
LA K+ SDH+A++ A + W+ + +RG +C WK L +M VI ++
Sbjct: 907 LANHQKALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKG-LQMSTMNVIWDAKQ 965
Query: 596 EFLSLLKDTGLVD-CDTS--ICNAWGRDERFIR---AVICYGLYPGISSIVQNGKSSSLK 649
+ L LL+ G + C S + D+ + A++C GLYP I V K L
Sbjct: 966 QLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC--VHKEKRKVLT 1023
Query: 650 TMEDGQVFLYSNSVNARESEI--PYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGSIS 707
T E L+ SVN + PYP+ VF EK++ +V K + VS ++LFG
Sbjct: 1024 T-ESKAALLHKTSVNCSNLAVTFPYPFFVFGEKIRTRAVSCKQLSMVSPLQVILFGSR-- 1080
Query: 708 QGEID---GHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPRLNIHTHEDLLA 764
+ID ++ + +L F + P +A ++ L++LI NP + E
Sbjct: 1081 --KIDLAANNIVRVDNWLNFDIEPELAAKIGALKPALEDLITVACDNPSDILRLEEPYAQ 1138
Query: 765 AVRLLVAEDQC 775
V+ V +D C
Sbjct: 1139 LVK--VVKDLC 1147
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 723 (259.6 bits), Expect = 2.1e-126, Sum P(3) = 2.1e-126
Identities = 163/413 (39%), Positives = 240/413 (58%)
Query: 241 EDTLKAANFNEYSSQTRESLSCWN----PDCIGFNLIEYVLCYICEKERPGAVLVFMTGW 296
E +L N N+ S++ RE L ++ + + +LI ++L IC GA+L+F+ G+
Sbjct: 588 ESSLVQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAILIFLPGY 647
Query: 297 DDINSLNDKL--QANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAE 354
D+I L D++ R + R + H +M +S+Q+ + P +GVRKI+L+TNIAE
Sbjct: 648 DEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAE 707
Query: 355 TSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLY 414
TSIT+NDVVFVID GK KE S+DALN + L WIS S +PG C+RL+
Sbjct: 708 TSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLF 767
Query: 415 PRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLG--TIAGFLSRALQSPELLAVQNAIEY 472
R + E+Q PE+LR PLQ LCL K L TIA FL +A + P L V+NA++
Sbjct: 768 SRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFLMKAPEPPPALIVRNAVQM 827
Query: 473 LKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLA 532
LK I A+D E+LT LG +LA LP+EP LGKM++ + CL+P+LTI L+ RDPF+
Sbjct: 828 LKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVL 887
Query: 533 PMD--KKDLAEAAKSQFSHD-YSDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPSM 587
P +K A + +F+ +SDH+AL+RAF+ W+ A G+E +C KNFLS +M
Sbjct: 888 PTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSD--GWERAFCEKNFLSQATM 945
Query: 588 KVIDSLRKEFLSLLKDTGLVDC----DTSICNAWGRDERFIRAVICYGLYPGI 636
++I +R + L L+ +G V D N + ++A + G+YP +
Sbjct: 946 EIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNL 998
Score = 537 (194.1 bits), Expect = 2.1e-126, Sum P(3) = 2.1e-126
Identities = 121/278 (43%), Positives = 170/278 (61%)
Query: 4 FRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICT 63
FR++LP ++++ ++ I +N+VV+I GETG GKTTQ+PQF+L+ + G C I CT
Sbjct: 204 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKN--GIPCRIFCT 261
Query: 64 QPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLV-DRN 122
QPRR++A++V+ERVA+ER E++G+++GY++RLE T L FCT G+LLR L+ D
Sbjct: 262 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDST 321
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L VTHVIVDEVHER DFLL L+DLL + P L+L+L SA LD LF YFG VI
Sbjct: 322 LSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 381
Query: 183 NIPGFTYPVRTHFLEDILDMTGY---RLTPYNQIDDYGQEKM------WKMSKQAPRKRK 233
I G + V+ FLEDIL TGY + Y + + +EK W +++ K +
Sbjct: 382 YIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKK-EKQREEKQQTTLTEWYSAQENTFKPE 440
Query: 234 SQ----IASAVE--DTLKAANFNEYSSQTRESLSCWNP 265
SQ +AS E D L +S T + ++C P
Sbjct: 441 SQRQRAVASVSEEYDLLDDGGDAVFSQLTEKDVNCLEP 478
Score = 49 (22.3 bits), Expect = 2.1e-126, Sum P(3) = 2.1e-126
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 660 SNSVNARESEIPYPWLVFNEKMKVNSVF-LKDSTAVSDSVLLLFGG 704
+N A +P WL+++E + + + ++ +AV+ +L+F G
Sbjct: 1035 ANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCG 1080
Score = 39 (18.8 bits), Expect = 4.3e-47, Sum P(2) = 4.3e-47
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 823 RAGYAAPSYRTKQLKNGQFRSTVEFNGMEIMGQP 856
RAG P + +F++ +EF E++ P
Sbjct: 754 RAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMP 787
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 715 (256.8 bits), Expect = 9.9e-125, Sum P(3) = 9.9e-125
Identities = 164/413 (39%), Positives = 241/413 (58%)
Query: 241 EDTLKAANFNEYSSQTRESLSCWN----PDCIGFNLIEYVLCYICEKERPGAVLVFMTGW 296
E +L N ++ S++ RE L ++ + + +LI ++L IC GAVL+F+ G+
Sbjct: 573 ESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGY 632
Query: 297 DDINSLNDK-LQANRILGDPT-RVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAE 354
D+I L D+ L ++ D T R + H +M +S+Q+ + P +GVRKI+L+TNIAE
Sbjct: 633 DEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAE 692
Query: 355 TSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLY 414
TSIT+NDVVFVID GK KE S+DALN + L WIS S +PG C+RL+
Sbjct: 693 TSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLF 752
Query: 415 PRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGT--IAGFLSRALQSPELLAVQNAIEY 472
R + E+Q PE+LR PLQ LCL K L IA FL +A + P L V+NA++
Sbjct: 753 SRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQM 812
Query: 473 LKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLA 532
LK I A+D E+LT LG +LA LP+EP LGKM++ + CL+P+LTI L+ RDPF+
Sbjct: 813 LKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVL 872
Query: 533 PMD--KKDLAEAAKSQFSHD-YSDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPSM 587
P +K A + +F+ +SDH+AL+RAF+ W+ A G+E +C KNFLS +M
Sbjct: 873 PTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQKARSD--GWERAFCEKNFLSQATM 930
Query: 588 KVIDSLRKEFLSLLKDTGLVDC----DTSICNAWGRDERFIRAVICYGLYPGI 636
++I +R + L L+ +G V D N + ++A + G+YP +
Sbjct: 931 EIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNL 983
Score = 528 (190.9 bits), Expect = 9.9e-125, Sum P(3) = 9.9e-125
Identities = 109/225 (48%), Positives = 150/225 (66%)
Query: 4 FRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICT 63
FR++LP ++++ ++ I +N+VV+I GETG GKTTQ+PQF+L+ + G C I CT
Sbjct: 189 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKN--GIPCRIFCT 246
Query: 64 QPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLV-DRN 122
QPRR++A++V+ERVA+ER E++G+++GY++RLE T L FCT G+LLR L+ D
Sbjct: 247 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDST 306
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L VTHVIVDEVHER DFLL L+DLL + P L+L+L SA LD LF YFG VI
Sbjct: 307 LSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 366
Query: 183 NIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQ 227
I G + V+ FLEDIL TGY ++ Y +EK + +Q
Sbjct: 367 YIQGRPFEVKEMFLEDILRTTGYT---NKEMLKYKKEKQQEEKQQ 408
Score = 50 (22.7 bits), Expect = 9.9e-125, Sum P(3) = 9.9e-125
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 660 SNSVNARESEIPYPWLVFNEKMKVNSVF-LKDSTAVSDSVLLLFGG 704
+N A +P WL+++E + + + ++ +AV+ +L+F G
Sbjct: 1020 ANGQAAAIKALPTDWLIYDEMTRAHRIANIRCCSAVTPVTILVFCG 1065
Score = 39 (18.8 bits), Expect = 4.4e-46, Sum P(2) = 4.4e-46
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 823 RAGYAAPSYRTKQLKNGQFRSTVEFNGMEIMGQP 856
RAG P + +F++ +EF E++ P
Sbjct: 739 RAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMP 772
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 707 (253.9 bits), Expect = 2.2e-124, Sum P(3) = 2.2e-124
Identities = 160/411 (38%), Positives = 238/411 (57%)
Query: 241 EDTLKAANFNEYSSQTRESLSCWN----PDCIGFNLIEYVLCYICEKERPGAVLVFMTGW 296
E +L + ++ S++ RE L ++ + + +LI ++L IC GA+L+F+ G+
Sbjct: 572 ESSLVQTSGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCEAGAILIFLPGY 631
Query: 297 DDINSLNDKL--QANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAE 354
D+I L D++ R + R + H +M +S+Q+ + P +GVRKI+L+TNIAE
Sbjct: 632 DEIVGLRDRILFDDKRFAENAHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAE 691
Query: 355 TSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLY 414
TSIT+NDVVFVID GK KE S+DALN + L WIS S +PG C+RL+
Sbjct: 692 TSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLF 751
Query: 415 PRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGT--IAGFLSRALQSPELLAVQNAIEY 472
R + E+Q PE+LR PLQ LCL K L IA FL +A + P L V+NA++
Sbjct: 752 SRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCAIADFLMKAPEPPPALIVRNAVQM 811
Query: 473 LKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLA 532
LK I A+D E+LT LG +LA LP+EP LGKM++ + CL+P+LTI L+ RDPF+
Sbjct: 812 LKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVL 871
Query: 533 PMD--KKDLAEAAKSQFSHD-YSDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPSM 587
P +K A + +F+ +SDH+AL+RAF+ W+ A G+E +C KNFLS +M
Sbjct: 872 PTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSD--GWERAFCEKNFLSQATM 929
Query: 588 KVIDSLRKEFLSLLKDTGLVDC----DTSICNAWGRDERFIRAVICYGLYP 634
++I +R + L L+ +G V D N + ++A + G+YP
Sbjct: 930 EIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYP 980
Score = 532 (192.3 bits), Expect = 2.2e-124, Sum P(3) = 2.2e-124
Identities = 120/278 (43%), Positives = 169/278 (60%)
Query: 4 FRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICT 63
FR++LP ++++ ++ I +N+VV+I GETG GKTTQ+PQF+L+ + G C I CT
Sbjct: 188 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKN--GIPCRIFCT 245
Query: 64 QPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLV-DRN 122
QPRR++A++V+ERVA+ER E++G+++GY++RLE T L FCT G+LLR L+ D
Sbjct: 246 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDST 305
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L VTHVIVDEVHER DFLL L+DLL + P L+L+L SA LD LF YFG VI
Sbjct: 306 LSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 365
Query: 183 NIPGFTYPVRTHFLEDILDMTGY---RLTPYNQIDDYGQEKM------WKMSKQAPRKRK 233
I G + V+ FLEDIL TGY + Y + + +EK W +++ K +
Sbjct: 366 YIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKK-EKQREEKQQTTLTEWYSAQENSFKPE 424
Query: 234 SQ----IASAVE--DTLKAANFNEYSSQTRESLSCWNP 265
SQ I + E D L +S T + ++C P
Sbjct: 425 SQRQRAIPNVTEEYDLLDDGGDAVFSQLTEKDVNCLEP 462
Score = 51 (23.0 bits), Expect = 2.2e-124, Sum P(3) = 2.2e-124
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 660 SNSVNARESEIPYPWLVFNEKMKVNSVF-LKDSTAVSDSVLLLFGG 704
+N A +P WL+++E + + + ++ +AV+ +L+F G
Sbjct: 1019 ANGQTAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCG 1064
Score = 39 (18.8 bits), Expect = 1.5e-46, Sum P(2) = 1.5e-46
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 823 RAGYAAPSYRTKQLKNGQFRSTVEFNGMEIMGQP 856
RAG P + +F++ +EF E++ P
Sbjct: 738 RAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMP 771
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 710 (255.0 bits), Expect = 2.6e-124, Sum P(2) = 2.6e-124
Identities = 161/413 (38%), Positives = 239/413 (57%)
Query: 241 EDTLKAANFNEYSSQTRESLSCWN----PDCIGFNLIEYVLCYICEKERPGAVLVFMTGW 296
E +L N ++ S++ RE L ++ + + +LI ++L IC GA+L+F+ G+
Sbjct: 572 ESSLVHTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHGCDAGAILIFLPGY 631
Query: 297 DDINSLNDKL--QANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAE 354
D+I L D++ R + R + H +M +S+Q+ + P +GVRKI+L+TNIAE
Sbjct: 632 DEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAE 691
Query: 355 TSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLY 414
TSIT+NDVVFVID GK KE S+DALN + L WIS S +PG C+RL+
Sbjct: 692 TSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRCRPGICFRLF 751
Query: 415 PRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGT--IAGFLSRALQSPELLAVQNAIEY 472
R + E+Q PE+LR PLQ LCL K L IA FL +A + P L V+NA++
Sbjct: 752 SRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQM 811
Query: 473 LKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLA 532
LK I A+D E+LT LG +LA LP+EP LGKM++ + CL+P+LTI L+ RDPF+
Sbjct: 812 LKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVL 871
Query: 533 PMD--KKDLAEAAKSQFSHD-YSDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPSM 587
P +K A + +F+ +SDH+AL+RAF+ W+ A G+E +C KNFLS +M
Sbjct: 872 PTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSD--GWERAFCEKNFLSQATM 929
Query: 588 KVIDSLRKEFLSLLKDTGLVDC----DTSICNAWGRDERFIRAVICYGLYPGI 636
++I +R + L L+ +G V D N + ++A + G+YP +
Sbjct: 930 EIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNL 982
Score = 533 (192.7 bits), Expect = 2.6e-124, Sum P(2) = 2.6e-124
Identities = 116/246 (47%), Positives = 159/246 (64%)
Query: 4 FRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICT 63
FR++LP ++++ ++ I +N+VV+I GETG GKTTQ+PQF+L+ + G C I CT
Sbjct: 188 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKN--GIPCRIFCT 245
Query: 64 QPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLV-DRN 122
QPRR++A++V+ERVA+ER E++G+++GY++RLE T L FCT G+LLR L+ D
Sbjct: 246 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDST 305
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L VTHVIVDEVHER DFLL L+DLL + P L+L+L SA LD LF YFG VI
Sbjct: 306 LSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 365
Query: 183 NIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA---SA 239
I G + V+ FLEDIL TGY N+ + +K KQ K++S + SA
Sbjct: 366 YIQGRPFEVKEMFLEDILRTTGYT----NK-----EMLKYKKEKQREEKQQSTLTEWYSA 416
Query: 240 VEDTLK 245
E+T K
Sbjct: 417 QENTFK 422
Score = 39 (18.8 bits), Expect = 1.9e-47, Sum P(2) = 1.9e-47
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 823 RAGYAAPSYRTKQLKNGQFRSTVEFNGMEIMGQP 856
RAG P + +F++ +EF E++ P
Sbjct: 738 RAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMP 771
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 1069 (381.4 bits), Expect = 4.5e-124, Sum P(2) = 4.5e-124
Identities = 249/592 (42%), Positives = 358/592 (60%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
ML+ R LP + K +L + + V+++ GETG GKTTQVPQFIL+ I S G C+I
Sbjct: 590 MLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNI 649
Query: 61 ICTQPRRISAMSVSERVASERGEK---LGESV-GYKVRLEGMKGRDTRLLFCTTGILLRR 116
ICTQPR A++V++RVA ER E SV Y+VR + + TRLLFCTTGILLR+
Sbjct: 650 ICTQPR---AITVAQRVADERCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRK 706
Query: 117 LLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRR------PELRLVLMSATLDAE 170
L+ D LK VTH+IVDEVHER + DFLLI+LK L+ ++ P+L+++LMSAT+DA
Sbjct: 707 LVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAH 766
Query: 171 LFSSYFGGATVINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQIDDYG-QEKMWKMSK 226
FS YFG +I G T+PV T+FLEDI + T Y L +P D +K+ ++
Sbjct: 767 QFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLASDSPAALSSDTSITDKLGSVN- 825
Query: 227 QAPRKRKSQIASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERP 286
PR +K+ + + D+ + + +S +S+ + ++L+E ++C+I +
Sbjct: 826 -VPRGKKNLMLAGWGDSYLVSEDSLNTSY--DSIKYIASAVVDYDLLEELICHIDDTCEE 882
Query: 287 GAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKI 346
GA+LVF+ G +IN L ++L A+ + LL H S+AS+EQ+ +F P G+RK+
Sbjct: 883 GAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKVFLRPPKGIRKV 942
Query: 347 VLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQ 406
++ATNIAETSITI DVV+VID GK KE Y+ S ++ W+S + V+
Sbjct: 943 IIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAGRVK 1002
Query: 407 PGECYRLYPRCVYDAFAE-YQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLA 465
PG C+ LY R ++ YQ+PE+LR PL LCL IK L LG I FLS+AL+ P A
Sbjct: 1003 PGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSKALEPPSESA 1062
Query: 466 VQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLS 525
+ +AI L +GAL+ +EELT LG +LA LP++ +GKML+ G IF CL P+L+I A LS
Sbjct: 1063 INSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPILSIAAFLS 1122
Query: 526 V-RDPFLAPMDKK-----------DLAEAAKSQFSHD-YSDHLALVRAFEGW 564
+ PF+ D++ D E++ + ++D SDHL +V A+E W
Sbjct: 1123 CCKSPFVYAKDEQNVDRVKLALLSDKLESSSNLNNNDRQSDHLLMVVAYEKW 1174
Score = 339 (124.4 bits), Expect = 3.4e-38, Sum P(3) = 3.4e-38
Identities = 84/200 (42%), Positives = 120/200 (60%)
Query: 425 YQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEE 484
YQ+PE+LR PL LCL IK L LG I FLS+AL+ P A+ +AI L +GAL+ +EE
Sbjct: 1022 YQVPEMLRVPLVELCLHIKLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEE 1081
Query: 485 LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSV-RDPFLAPMDKK------ 537
LT LG +LA LP++ +GKML+ G IF CL P+L+I A LS + PF+ D++
Sbjct: 1082 LTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKDEQNVDRVK 1141
Query: 538 -----DLAEAAKSQFSHD-YSDHLALVRAFEGWKDA--ERGLAGYE-YCWKNFLSAPSMK 588
D E++ + ++D SDHL +V A+E W E+G E +C FL++ M+
Sbjct: 1142 LALLSDKLESSSNLNNNDRQSDHLLMVVAYEKWVRILHEQGFKAAESFCESKFLNSSVMR 1201
Query: 589 VIDSLRKEFLSLLKDTGLVD 608
++ R EF LL D GL++
Sbjct: 1202 MMRERRVEFGMLLADIGLIN 1221
Score = 171 (65.3 bits), Expect = 4.5e-124, Sum P(2) = 4.5e-124
Identities = 45/168 (26%), Positives = 89/168 (52%)
Query: 615 NAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKTME------DG--QVFLYSNSVNAR 666
N + ++ ++A++C GL P I+ + N + + + DG +V ++ NS+N
Sbjct: 1245 NMYSQEPEVVKAILCAGLCPNIAEGLVNRLTKPAEETQRYAVWHDGKREVHIHRNSINKN 1304
Query: 667 ESEIPYPWLVFNEKMKVNSV-FLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGGYLEFF 725
YP++VF EK++ V +L+D+T VS +LLFGGSI+ G + + G+L+
Sbjct: 1305 CKAFQYPFIVFLEKLETKKVVYLQDTTVVSPFSILLFGGSINVHHQSGSVTI-DGWLKLT 1363
Query: 726 MNPSVADMYQCIRRELDELIQNKLLNPRLNIHTHEDLLAA-VRLLVAE 772
A +++ +R L ++++ + P + H +++ + V LL+ E
Sbjct: 1364 APAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSMVHLLIEE 1411
Score = 41 (19.5 bits), Expect = 3.4e-38, Sum P(3) = 3.4e-38
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 124 KGVTHVIVDEVHERGMNED-FLLIVLKDL-LSRRP 156
K V ++D+VHE +N D F + DL L P
Sbjct: 288 KEVASSVLDDVHE-SVNADAFFFQLFDDLTLDTNP 321
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 683 (245.5 bits), Expect = 1.8e-123, Sum P(2) = 1.8e-123
Identities = 161/418 (38%), Positives = 234/418 (55%)
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDC-IGFNLIEYVLCYICEKERPGAVLVFMTGWDD 298
+ED L ++Y + R S +C + +L+ ++ +I + PG +L F+ GW +
Sbjct: 649 LEDILAKLGKHQYPHRHRHHES--EDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQE 706
Query: 299 INSLNDKLQANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
I + +LQ LG ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETSI
Sbjct: 707 IKGVQQRLQ--EALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSI 764
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRC 417
TIND+V V+D G KE YD SCL W+S + Q G Y L+PR
Sbjct: 765 TINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRS 824
Query: 418 VYDAFAEYQLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
+ A +Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ I
Sbjct: 825 RLEKMAPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEI 884
Query: 477 GALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDK 536
G LD E LT LGQ LA + +P+L K ++L AIF CL P+L +V+ L+ RDPF + +
Sbjct: 885 GVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQN 943
Query: 537 KDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAER--GLAGYE-YCWKNFLSAPSMKVIDS 592
+ + K+ SHD SDHLA VRA GW++ R + E Y +N L APS++ I
Sbjct: 944 RAEVDKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHG 1003
Query: 593 LRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
L K+F + + LV DC ++ CN + +E ++ V+ GLYP + + Q GK
Sbjct: 1004 LIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ-GK 1060
Score = 569 (205.4 bits), Expect = 1.8e-123, Sum P(2) = 1.8e-123
Identities = 115/204 (56%), Positives = 147/204 (72%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP ++ +L AI Q+ VV+I+G+TGCGKTT++PQ +LE +T RGA C++I TQPRR
Sbjct: 460 LPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 519
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKGV 126
ISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+GV
Sbjct: 520 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 579
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+HV+VDEVHER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +PG
Sbjct: 580 SHVVVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 639
Query: 187 FTYPVRTHFLEDILDMTGYRLTPY 210
F YPV+ H+LEDIL G P+
Sbjct: 640 FMYPVKEHYLEDILAKLGKHQYPH 663
Score = 155 (59.6 bits), Expect = 2.3e-63, Sum P(2) = 2.3e-63
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 564 WKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV----DCD--TSICNAW 617
W+D + Y +N L APS++ I L K+F + + LV DC ++ CN +
Sbjct: 978 WQDRS---SRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEY 1034
Query: 618 GRDERFIRAVICYGLYPGI-----SSIVQNGK----SSSLKTMEDGQVFLYSNSVNARES 668
+E ++ V+ GLYP + + + GK S + +T + G + L+ +++N +
Sbjct: 1035 SEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREAT 1093
Query: 669 EIPYPWLVFNEKMKVN-SVFLKDSTAVSD-SVLLLFGGSI 706
+ WL + +K N SVF++DS+ V +VLLL G +
Sbjct: 1094 RLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1133
Score = 39 (18.8 bits), Expect = 3.4e-69, Sum P(3) = 3.4e-69
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 118 LVDRNLKGVTHVIVDEVHERGMNE 141
LVDRN + +TH + + R + E
Sbjct: 343 LVDRNNEPLTHAMYNLASLRELGE 366
Score = 37 (18.1 bits), Expect = 3.4e-69, Sum P(3) = 3.4e-69
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 62 CTQPRRISAMSVSERVASERGEKLGESV 89
C++P R + +E E GE G V
Sbjct: 39 CSRPDRTQEAAEAEAAPGEPGEGDGSVV 66
Score = 37 (18.1 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 16/51 (31%), Positives = 22/51 (43%)
Query: 469 AIEYLKIIGALDHNEELTVLGQY-LAMLPMEPKLGKMLILGAIFNCLEPVL 518
A + LK +G +D N E Y LA L +LG+ EP+L
Sbjct: 334 ACKKLKSLGLVDRNNEPLTHAMYNLASLR---ELGETQRRPCTIQVPEPIL 381
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 677 (243.4 bits), Expect = 2.1e-123, Sum P(2) = 2.1e-123
Identities = 158/418 (37%), Positives = 232/418 (55%)
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDC-IGFNLIEYVLCYICEKERPGAVLVFMTGWDD 298
+ED L ++Y + R S +C + +L+ ++ +I + PG +L F+ GW +
Sbjct: 623 LEDILAKLGKHQYPHRHRHHES--EDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQE 680
Query: 299 INSLNDKLQANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
I + +LQ LG ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETSI
Sbjct: 681 IKGVQQRLQ--EALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSI 738
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRC 417
T+ND+V V+D G KE YD SCL W+S + Q G Y L+PR
Sbjct: 739 TVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRS 798
Query: 418 VYDAFAEYQLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
+ +Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ I
Sbjct: 799 RLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEI 858
Query: 477 GALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDK 536
G LD E LT LGQ LA + +P+L K ++L AIF CL P+L +V+ L+ RDPF + +
Sbjct: 859 GVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQN 917
Query: 537 KDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAERG---LAGYEYCWKNFLSAPSMKVIDS 592
+ + K+ SHD SDHLA VRA GW++ R + Y +N L APS++ I
Sbjct: 918 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHG 977
Query: 593 LRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
L K+F + + LV DC ++ CN + +E ++ V+ GLYP + + Q GK
Sbjct: 978 LIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ-GK 1034
Score = 574 (207.1 bits), Expect = 2.1e-123, Sum P(2) = 2.1e-123
Identities = 117/204 (57%), Positives = 148/204 (72%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP ++ +L+AI Q+ VV+ISG+TGCGKTT++PQ +LE +T RGA C++I TQPRR
Sbjct: 434 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKGV 126
ISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+GV
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 553
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+HVIVDEVHER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +PG
Sbjct: 554 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 613
Query: 187 FTYPVRTHFLEDILDMTGYRLTPY 210
F YPV+ H+LEDIL G P+
Sbjct: 614 FMYPVKEHYLEDILAKLGKHQYPH 637
Score = 154 (59.3 bits), Expect = 6.5e-64, Sum P(2) = 6.5e-64
Identities = 44/148 (29%), Positives = 77/148 (52%)
Query: 576 YCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVIC 629
Y +N L APS++ I L K+F + + LV DC ++ CN + +E ++ V+
Sbjct: 961 YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLM 1020
Query: 630 YGLYPGI-----SSIVQNGK----SSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEK 680
GLYP + + + GK S + +T + G + L+ +++N + + WL +
Sbjct: 1021 AGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRLRSRWLTYFMA 1079
Query: 681 MKVN-SVFLKDSTAVSD-SVLLLFGGSI 706
+K N SVF++DS+ V +VLLL G +
Sbjct: 1080 VKSNGSVFVRDSSQVHPLAVLLLTDGDV 1107
Score = 39 (18.8 bits), Expect = 5.8e-67, Sum P(2) = 5.8e-67
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 118 LVDRNLKGVTHVIVDEVHERGMNE 141
LVDRN + +TH + + R + E
Sbjct: 317 LVDRNNEPLTHAMYNLASLRELGE 340
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 20/59 (33%), Positives = 26/59 (44%)
Query: 469 AIEYLKIIGALDHNEELTVLGQY-LAMLPMEPKLGKMLILGAIFNCLEPVLT-IVAGLS 525
A + LK +G +D N E Y LA L +LG+ EP+L I A LS
Sbjct: 308 ACKKLKSLGLVDRNNEPLTHAMYNLASLR---ELGETQRRPCTIQVPEPILRKIEAFLS 363
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 677 (243.4 bits), Expect = 2.1e-123, Sum P(2) = 2.1e-123
Identities = 158/418 (37%), Positives = 232/418 (55%)
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDC-IGFNLIEYVLCYICEKERPGAVLVFMTGWDD 298
+ED L ++Y + R S +C + +L+ ++ +I + PG +L F+ GW +
Sbjct: 623 LEDILAKLGKHQYPHRHRHHES--EDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQE 680
Query: 299 INSLNDKLQANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
I + +LQ LG ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETSI
Sbjct: 681 IKGVQQRLQ--EALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSI 738
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRC 417
T+ND+V V+D G KE YD SCL W+S + Q G Y L+PR
Sbjct: 739 TVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRS 798
Query: 418 VYDAFAEYQLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
+ +Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ I
Sbjct: 799 RLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEI 858
Query: 477 GALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDK 536
G LD E LT LGQ LA + +P+L K ++L AIF CL P+L +V+ L+ RDPF + +
Sbjct: 859 GVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQN 917
Query: 537 KDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAERG---LAGYEYCWKNFLSAPSMKVIDS 592
+ + K+ SHD SDHLA VRA GW++ R + Y +N L APS++ I
Sbjct: 918 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHG 977
Query: 593 LRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
L K+F + + LV DC ++ CN + +E ++ V+ GLYP + + Q GK
Sbjct: 978 LIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ-GK 1034
Score = 574 (207.1 bits), Expect = 2.1e-123, Sum P(2) = 2.1e-123
Identities = 117/204 (57%), Positives = 148/204 (72%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP ++ +L+AI Q+ VV+ISG+TGCGKTT++PQ +LE +T RGA C++I TQPRR
Sbjct: 434 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKGV 126
ISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+GV
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 553
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+HVIVDEVHER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +PG
Sbjct: 554 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 613
Query: 187 FTYPVRTHFLEDILDMTGYRLTPY 210
F YPV+ H+LEDIL G P+
Sbjct: 614 FMYPVKEHYLEDILAKLGKHQYPH 637
Score = 154 (59.3 bits), Expect = 6.5e-64, Sum P(2) = 6.5e-64
Identities = 44/148 (29%), Positives = 77/148 (52%)
Query: 576 YCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVIC 629
Y +N L APS++ I L K+F + + LV DC ++ CN + +E ++ V+
Sbjct: 961 YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLM 1020
Query: 630 YGLYPGI-----SSIVQNGK----SSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEK 680
GLYP + + + GK S + +T + G + L+ +++N + + WL +
Sbjct: 1021 AGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRLRSRWLTYFMA 1079
Query: 681 MKVN-SVFLKDSTAVSD-SVLLLFGGSI 706
+K N SVF++DS+ V +VLLL G +
Sbjct: 1080 VKSNGSVFVRDSSQVHPLAVLLLTDGDV 1107
Score = 39 (18.8 bits), Expect = 5.8e-67, Sum P(2) = 5.8e-67
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 118 LVDRNLKGVTHVIVDEVHERGMNE 141
LVDRN + +TH + + R + E
Sbjct: 317 LVDRNNEPLTHAMYNLASLRELGE 340
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 20/59 (33%), Positives = 26/59 (44%)
Query: 469 AIEYLKIIGALDHNEELTVLGQY-LAMLPMEPKLGKMLILGAIFNCLEPVLT-IVAGLS 525
A + LK +G +D N E Y LA L +LG+ EP+L I A LS
Sbjct: 308 ACKKLKSLGLVDRNNEPLTHAMYNLASLR---ELGETQRRPCTIQVPEPILRKIEAFLS 363
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 677 (243.4 bits), Expect = 2.4e-123, Sum P(2) = 2.4e-123
Identities = 158/418 (37%), Positives = 232/418 (55%)
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDC-IGFNLIEYVLCYICEKERPGAVLVFMTGWDD 298
+ED L ++Y + R S +C + +L+ ++ +I + PG +L F+ GW +
Sbjct: 646 LEDILAKLGKHQYPHRHRHHES--EDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQE 703
Query: 299 INSLNDKLQANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
I + +LQ LG ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETSI
Sbjct: 704 IKGVQQRLQ--EALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSI 761
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRC 417
T+ND+V V+D G KE YD SCL W+S + Q G Y L+PR
Sbjct: 762 TVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRS 821
Query: 418 VYDAFAEYQLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
+ +Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ I
Sbjct: 822 RLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEI 881
Query: 477 GALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDK 536
G LD E LT LGQ LA + +P+L K ++L AIF CL P+L +V+ L+ RDPF + +
Sbjct: 882 GVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQN 940
Query: 537 KDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAERG---LAGYEYCWKNFLSAPSMKVIDS 592
+ + K+ SHD SDHLA VRA GW++ R + Y +N L APS++ I
Sbjct: 941 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHG 1000
Query: 593 LRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
L K+F + + LV DC ++ CN + +E ++ V+ GLYP + + Q GK
Sbjct: 1001 LIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ-GK 1057
Score = 574 (207.1 bits), Expect = 2.4e-123, Sum P(2) = 2.4e-123
Identities = 117/204 (57%), Positives = 148/204 (72%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP ++ +L+AI Q+ VV+ISG+TGCGKTT++PQ +LE +T RGA C++I TQPRR
Sbjct: 457 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 516
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKGV 126
ISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+GV
Sbjct: 517 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 576
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+HVIVDEVHER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +PG
Sbjct: 577 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 636
Query: 187 FTYPVRTHFLEDILDMTGYRLTPY 210
F YPV+ H+LEDIL G P+
Sbjct: 637 FMYPVKEHYLEDILAKLGKHQYPH 660
Score = 154 (59.3 bits), Expect = 7.2e-64, Sum P(2) = 7.2e-64
Identities = 44/148 (29%), Positives = 77/148 (52%)
Query: 576 YCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVIC 629
Y +N L APS++ I L K+F + + LV DC ++ CN + +E ++ V+
Sbjct: 984 YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLM 1043
Query: 630 YGLYPGI-----SSIVQNGK----SSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEK 680
GLYP + + + GK S + +T + G + L+ +++N + + WL +
Sbjct: 1044 AGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRLRSRWLTYFMA 1102
Query: 681 MKVN-SVFLKDSTAVSD-SVLLLFGGSI 706
+K N SVF++DS+ V +VLLL G +
Sbjct: 1103 VKSNGSVFVRDSSQVHPLAVLLLTDGDV 1130
Score = 39 (18.8 bits), Expect = 6.8e-67, Sum P(2) = 6.8e-67
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 118 LVDRNLKGVTHVIVDEVHERGMNE 141
LVDRN + +TH + + R + E
Sbjct: 340 LVDRNNEPLTHAMYNLASLRELGE 363
Score = 38 (18.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 20/59 (33%), Positives = 26/59 (44%)
Query: 469 AIEYLKIIGALDHNEELTVLGQY-LAMLPMEPKLGKMLILGAIFNCLEPVLT-IVAGLS 525
A + LK +G +D N E Y LA L +LG+ EP+L I A LS
Sbjct: 331 ACKKLKSLGLVDRNNEPLTHAMYNLASLR---ELGETQRRPCTIQVPEPILRKIEAFLS 386
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 677 (243.4 bits), Expect = 2.5e-123, Sum P(2) = 2.5e-123
Identities = 158/418 (37%), Positives = 232/418 (55%)
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDC-IGFNLIEYVLCYICEKERPGAVLVFMTGWDD 298
+ED L ++Y + R S +C + +L+ ++ +I + PG +L F+ GW +
Sbjct: 651 LEDILAKLGKHQYPHRHRHHES--EDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQE 708
Query: 299 INSLNDKLQANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
I + +LQ LG ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETSI
Sbjct: 709 IKGVQQRLQ--EALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSI 766
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRC 417
T+ND+V V+D G KE YD SCL W+S + Q G Y L+PR
Sbjct: 767 TVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRS 826
Query: 418 VYDAFAEYQLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
+ +Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ I
Sbjct: 827 RLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEI 886
Query: 477 GALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDK 536
G LD E LT LGQ LA + +P+L K ++L AIF CL P+L +V+ L+ RDPF + +
Sbjct: 887 GVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQN 945
Query: 537 KDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAERG---LAGYEYCWKNFLSAPSMKVIDS 592
+ + K+ SHD SDHLA VRA GW++ R + Y +N L APS++ I
Sbjct: 946 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHG 1005
Query: 593 LRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
L K+F + + LV DC ++ CN + +E ++ V+ GLYP + + Q GK
Sbjct: 1006 LIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ-GK 1062
Score = 574 (207.1 bits), Expect = 2.5e-123, Sum P(2) = 2.5e-123
Identities = 117/204 (57%), Positives = 148/204 (72%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP ++ +L+AI Q+ VV+ISG+TGCGKTT++PQ +LE +T RGA C++I TQPRR
Sbjct: 462 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 521
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKGV 126
ISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+GV
Sbjct: 522 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 581
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+HVIVDEVHER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +PG
Sbjct: 582 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 641
Query: 187 FTYPVRTHFLEDILDMTGYRLTPY 210
F YPV+ H+LEDIL G P+
Sbjct: 642 FMYPVKEHYLEDILAKLGKHQYPH 665
Score = 154 (59.3 bits), Expect = 7.4e-64, Sum P(2) = 7.4e-64
Identities = 44/148 (29%), Positives = 77/148 (52%)
Query: 576 YCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVIC 629
Y +N L APS++ I L K+F + + LV DC ++ CN + +E ++ V+
Sbjct: 989 YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLM 1048
Query: 630 YGLYPGI-----SSIVQNGK----SSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEK 680
GLYP + + + GK S + +T + G + L+ +++N + + WL +
Sbjct: 1049 AGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRLRSRWLTYFMA 1107
Query: 681 MKVN-SVFLKDSTAVSD-SVLLLFGGSI 706
+K N SVF++DS+ V +VLLL G +
Sbjct: 1108 VKSNGSVFVRDSSQVHPLAVLLLTDGDV 1135
Score = 39 (18.8 bits), Expect = 7.0e-67, Sum P(2) = 7.0e-67
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 118 LVDRNLKGVTHVIVDEVHERGMNE 141
LVDRN + +TH + + R + E
Sbjct: 345 LVDRNNEPLTHAMYNLASLRELGE 368
Score = 38 (18.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 20/59 (33%), Positives = 26/59 (44%)
Query: 469 AIEYLKIIGALDHNEELTVLGQY-LAMLPMEPKLGKMLILGAIFNCLEPVLT-IVAGLS 525
A + LK +G +D N E Y LA L +LG+ EP+L I A LS
Sbjct: 336 ACKKLKSLGLVDRNNEPLTHAMYNLASLR---ELGETQRRPCTIQVPEPILRKIEAFLS 391
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 679 (244.1 bits), Expect = 4.0e-123, Sum P(2) = 4.0e-123
Identities = 160/418 (38%), Positives = 233/418 (55%)
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDC-IGFNLIEYVLCYICEKERPGAVLVFMTGWDD 298
+ED L ++Y + R S +C + +L+ ++ +I + PG +L F+ GW +
Sbjct: 651 LEDILAKLGKHQYPHRHRHHES--EDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQE 708
Query: 299 INSLNDKLQANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
I + +LQ LG ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETSI
Sbjct: 709 IKGVQQRLQ--EALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSI 766
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRC 417
TIND+V V+D G KE YD SCL W+S + Q G Y L+PR
Sbjct: 767 TINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRS 826
Query: 418 VYDAFAEYQLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
+ +Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ I
Sbjct: 827 RLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEI 886
Query: 477 GALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDK 536
G LD E LT LGQ LA + +P+L K ++L AIF CL P+L +V+ L+ RDPF + +
Sbjct: 887 GVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQN 945
Query: 537 KDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAER--GLAGYE-YCWKNFLSAPSMKVIDS 592
+ + K+ SHD SDHLA VRA GW++ R + E Y +N L APS++ I
Sbjct: 946 RAEVDKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHG 1005
Query: 593 LRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
L K+F + + LV DC ++ CN + +E ++ V+ GLYP + + Q GK
Sbjct: 1006 LIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ-GK 1062
Score = 570 (205.7 bits), Expect = 4.0e-123, Sum P(2) = 4.0e-123
Identities = 116/204 (56%), Positives = 147/204 (72%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP ++ +L AI Q+ VV+I+G+TGCGKTT++PQ +LE +T RGA C++I TQPRR
Sbjct: 462 LPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 521
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKGV 126
ISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+GV
Sbjct: 522 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 581
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+HVIVDEVHER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +PG
Sbjct: 582 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 641
Query: 187 FTYPVRTHFLEDILDMTGYRLTPY 210
F YPV+ H+LEDIL G P+
Sbjct: 642 FMYPVKEHYLEDILAKLGKHQYPH 665
Score = 155 (59.6 bits), Expect = 1.8e-63, Sum P(2) = 1.8e-63
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 564 WKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV----DCD--TSICNAW 617
W+D + Y +N L APS++ I L K+F + + LV DC ++ CN +
Sbjct: 980 WQDRS---SRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEY 1036
Query: 618 GRDERFIRAVICYGLYPGI-----SSIVQNGK----SSSLKTMEDGQVFLYSNSVNARES 668
+E ++ V+ GLYP + + + GK S + +T + G + L+ +++N +
Sbjct: 1037 SEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREAT 1095
Query: 669 EIPYPWLVFNEKMKVN-SVFLKDSTAVSD-SVLLLFGGSI 706
+ WL + +K N SVF++DS+ V +VLLL G +
Sbjct: 1096 RLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1135
Score = 39 (18.8 bits), Expect = 4.2e-67, Sum P(2) = 4.2e-67
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 118 LVDRNLKGVTHVIVDEVHERGMNE 141
LVDRN + +TH + + R + E
Sbjct: 345 LVDRNNEPLTHAMYNLASLRELGE 368
Score = 37 (18.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 16/51 (31%), Positives = 22/51 (43%)
Query: 469 AIEYLKIIGALDHNEELTVLGQY-LAMLPMEPKLGKMLILGAIFNCLEPVL 518
A + LK +G +D N E Y LA L +LG+ EP+L
Sbjct: 336 ACKKLKSLGLVDRNNEPLTHAMYNLASLR---ELGETQRRPCTIQVPEPIL 383
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 677 (243.4 bits), Expect = 4.3e-123, Sum P(2) = 4.3e-123
Identities = 159/418 (38%), Positives = 233/418 (55%)
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDC-IGFNLIEYVLCYICEKERPGAVLVFMTGWDD 298
+ED L ++Y + R S +C + +L+ ++ +I + PG +L F+ GW +
Sbjct: 623 LEDILAKLGKHQYPHRHRHHES--EDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQE 680
Query: 299 INSLNDKLQANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
I + +LQ LG ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETSI
Sbjct: 681 IKGVQQRLQ--EALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSI 738
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRC 417
T+ND+V V+D G KE YD SCL W+S + Q G Y L+PR
Sbjct: 739 TVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRS 798
Query: 418 VYDAFAEYQLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
+ +Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ I
Sbjct: 799 RLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEI 858
Query: 477 GALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDK 536
G LD E LT LGQ LA + +P+L K ++L AIF CL P+L +V+ L+ RDPF + +
Sbjct: 859 GVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQN 917
Query: 537 KDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAER--GLAGYE-YCWKNFLSAPSMKVIDS 592
+ + K+ SHD SDHLA VRA GW++ R + E Y +N L APS++ I
Sbjct: 918 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHG 977
Query: 593 LRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
L K+F + + LV DC ++ CN + +E ++ V+ GLYP + + Q GK
Sbjct: 978 LIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ-GK 1034
Score = 569 (205.4 bits), Expect = 4.3e-123, Sum P(2) = 4.3e-123
Identities = 116/204 (56%), Positives = 147/204 (72%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP ++ +L AI Q+ VV+ISG+TGCGKTT++PQ +LE ++ RGA C++I TQPRR
Sbjct: 434 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRR 493
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKGV 126
ISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+GV
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 553
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+HVIVDEVHER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +PG
Sbjct: 554 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 613
Query: 187 FTYPVRTHFLEDILDMTGYRLTPY 210
F YPV+ H+LEDIL G P+
Sbjct: 614 FMYPVKEHYLEDILAKLGKHQYPH 637
Score = 155 (59.6 bits), Expect = 1.5e-63, Sum P(2) = 1.5e-63
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 564 WKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV----DCD--TSICNAW 617
W+D + Y +N L APS++ I L K+F + + LV DC ++ CN +
Sbjct: 952 WQDRS---SRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEY 1008
Query: 618 GRDERFIRAVICYGLYPGI-----SSIVQNGK----SSSLKTMEDGQVFLYSNSVNARES 668
+E ++ V+ GLYP + + + GK S + +T + G + L+ +++N +
Sbjct: 1009 SEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREAT 1067
Query: 669 EIPYPWLVFNEKMKVN-SVFLKDSTAVSD-SVLLLFGGSI 706
+ WL + +K N SVF++DS+ V +VLLL G +
Sbjct: 1068 RLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1107
Score = 39 (18.8 bits), Expect = 3.6e-67, Sum P(2) = 3.6e-67
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 118 LVDRNLKGVTHVIVDEVHERGMNE 141
LVDRN + +TH + + R + E
Sbjct: 317 LVDRNNEPLTHAMYNLASLRELGE 340
Score = 37 (18.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 16/51 (31%), Positives = 22/51 (43%)
Query: 469 AIEYLKIIGALDHNEELTVLGQY-LAMLPMEPKLGKMLILGAIFNCLEPVL 518
A + LK +G +D N E Y LA L +LG+ EP+L
Sbjct: 308 ACKKLKSLGLVDRNNEPLTHAMYNLASLR---ELGETQRRPCTIQVPEPIL 355
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 677 (243.4 bits), Expect = 4.4e-123, Sum P(2) = 4.4e-123
Identities = 160/418 (38%), Positives = 233/418 (55%)
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDC-IGFNLIEYVLCYICEKERPGAVLVFMTGWDD 298
+ED L ++Y + R S +C + +L+ ++ +I + PG +L F+ GW +
Sbjct: 595 LEDILAKLGKHQYLHRHRHHES--EDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQE 652
Query: 299 INSLNDKLQANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
I + +LQ LG ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETSI
Sbjct: 653 IKGVQQRLQ--EALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSI 710
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRC 417
TIND+V V+D G KE YD SCL W+S + Q G Y L+PR
Sbjct: 711 TINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRS 770
Query: 418 VYDAFAEYQLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
+ +Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ I
Sbjct: 771 RLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEI 830
Query: 477 GALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDK 536
G LD E LT LGQ LA + +P+L K ++L AIF CL P+L +V+ L+ RDPF + +
Sbjct: 831 GVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQN 889
Query: 537 KDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAER--GLAGYE-YCWKNFLSAPSMKVIDS 592
+ + K+ SHD SDHLA VRA GW++ R + E Y +N L APS++ I
Sbjct: 890 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHG 949
Query: 593 LRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
L K+F + + LV DC ++ CN + +E ++ V+ GLYP + + Q GK
Sbjct: 950 LIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ-GK 1006
Score = 570 (205.7 bits), Expect = 4.4e-123, Sum P(2) = 4.4e-123
Identities = 116/198 (58%), Positives = 145/198 (73%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP ++ +L AI Q+ VV+ISG+TGCGKTT++PQ +LE +T RGA C++I TQPRR
Sbjct: 406 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 465
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKGV 126
ISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+GV
Sbjct: 466 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGV 525
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+HVIVDEVHER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +PG
Sbjct: 526 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 585
Query: 187 FTYPVRTHFLEDILDMTG 204
F YPV+ H+LEDIL G
Sbjct: 586 FMYPVKEHYLEDILAKLG 603
Score = 155 (59.6 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 564 WKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV----DCD--TSICNAW 617
W+D + Y +N L APS++ I L K+F + + LV DC ++ CN +
Sbjct: 924 WQDRS---SRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEY 980
Query: 618 GRDERFIRAVICYGLYPGI-----SSIVQNGK----SSSLKTMEDGQVFLYSNSVNARES 668
+E ++ V+ GLYP + + + GK S + +T + G + L+ +++N +
Sbjct: 981 SEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREAT 1039
Query: 669 EIPYPWLVFNEKMKVN-SVFLKDSTAVSD-SVLLLFGGSI 706
+ WL + +K N SVF++DS+ V +VLLL G +
Sbjct: 1040 RLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1079
Score = 39 (18.8 bits), Expect = 4.7e-67, Sum P(2) = 4.7e-67
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 118 LVDRNLKGVTHVIVDEVHERGMNE 141
LVDRN + +TH + + R + E
Sbjct: 289 LVDRNNEPLTHAMYNLASLRELGE 312
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 469 AIEYLKIIGALDHNEELTVLGQY-LAMLPMEPKLGKMLILGAIFNCLEPVL----TIVAG 523
A + LK +G +D N E Y LA L +LG+ EP+L T +
Sbjct: 280 ACKKLKSLGLVDRNNEPLTHAMYNLASLR---ELGETQRRPCTIQVPEPILRKIETFLNH 336
Query: 524 LSVRDPFLAP 533
V ++AP
Sbjct: 337 YPVESSWIAP 346
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 677 (243.4 bits), Expect = 5.5e-123, Sum P(2) = 5.5e-123
Identities = 160/418 (38%), Positives = 233/418 (55%)
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDC-IGFNLIEYVLCYICEKERPGAVLVFMTGWDD 298
+ED L ++Y + R S +C + +L+ ++ +I + PG +L F+ GW +
Sbjct: 623 LEDILAKLGKHQYLHRHRHHES--EDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQE 680
Query: 299 INSLNDKLQANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
I + +LQ LG ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETSI
Sbjct: 681 IKGVQQRLQ--EALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSI 738
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRC 417
TIND+V V+D G KE YD SCL W+S + Q G Y L+PR
Sbjct: 739 TINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRS 798
Query: 418 VYDAFAEYQLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
+ +Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ I
Sbjct: 799 RLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEI 858
Query: 477 GALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDK 536
G LD E LT LGQ LA + +P+L K ++L AIF CL P+L +V+ L+ RDPF + +
Sbjct: 859 GVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQN 917
Query: 537 KDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAER--GLAGYE-YCWKNFLSAPSMKVIDS 592
+ + K+ SHD SDHLA VRA GW++ R + E Y +N L APS++ I
Sbjct: 918 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHG 977
Query: 593 LRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
L K+F + + LV DC ++ CN + +E ++ V+ GLYP + + Q GK
Sbjct: 978 LIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ-GK 1034
Score = 570 (205.7 bits), Expect = 5.5e-123, Sum P(2) = 5.5e-123
Identities = 116/198 (58%), Positives = 145/198 (73%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP ++ +L AI Q+ VV+ISG+TGCGKTT++PQ +LE +T RGA C++I TQPRR
Sbjct: 434 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKGV 126
ISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+GV
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGV 553
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+HVIVDEVHER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +PG
Sbjct: 554 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 613
Query: 187 FTYPVRTHFLEDILDMTG 204
F YPV+ H+LEDIL G
Sbjct: 614 FMYPVKEHYLEDILAKLG 631
Score = 155 (59.6 bits), Expect = 1.5e-63, Sum P(2) = 1.5e-63
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 564 WKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV----DCD--TSICNAW 617
W+D + Y +N L APS++ I L K+F + + LV DC ++ CN +
Sbjct: 952 WQDRS---SRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEY 1008
Query: 618 GRDERFIRAVICYGLYPGI-----SSIVQNGK----SSSLKTMEDGQVFLYSNSVNARES 668
+E ++ V+ GLYP + + + GK S + +T + G + L+ +++N +
Sbjct: 1009 SEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREAT 1067
Query: 669 EIPYPWLVFNEKMKVN-SVFLKDSTAVSD-SVLLLFGGSI 706
+ WL + +K N SVF++DS+ V +VLLL G +
Sbjct: 1068 RLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1107
Score = 39 (18.8 bits), Expect = 5.8e-67, Sum P(2) = 5.8e-67
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 118 LVDRNLKGVTHVIVDEVHERGMNE 141
LVDRN + +TH + + R + E
Sbjct: 317 LVDRNNEPLTHAMYNLASLRELGE 340
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 469 AIEYLKIIGALDHNEELTVLGQY-LAMLPMEPKLGKMLILGAIFNCLEPVL----TIVAG 523
A + LK +G +D N E Y LA L +LG+ EP+L T +
Sbjct: 308 ACKKLKSLGLVDRNNEPLTHAMYNLASLR---ELGETQRRPCTIQVPEPILRKIETFLNH 364
Query: 524 LSVRDPFLAP 533
V ++AP
Sbjct: 365 YPVESSWIAP 374
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 677 (243.4 bits), Expect = 8.5e-123, Sum P(2) = 8.5e-123
Identities = 159/418 (38%), Positives = 233/418 (55%)
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDC-IGFNLIEYVLCYICEKERPGAVLVFMTGWDD 298
+ED L ++Y + R S +C + +L+ ++ +I + PG +L F+ GW +
Sbjct: 651 LEDILAKLGKHQYPHRHRHHES--EDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQE 708
Query: 299 INSLNDKLQANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
I + +LQ LG ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETSI
Sbjct: 709 IKGVQQRLQ--EALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSI 766
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRC 417
T+ND+V V+D G KE YD SCL W+S + Q G Y L+PR
Sbjct: 767 TVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRS 826
Query: 418 VYDAFAEYQLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
+ +Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ I
Sbjct: 827 RLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEI 886
Query: 477 GALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDK 536
G LD E LT LGQ LA + +P+L K ++L AIF CL P+L +V+ L+ RDPF + +
Sbjct: 887 GVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQN 945
Query: 537 KDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAER--GLAGYE-YCWKNFLSAPSMKVIDS 592
+ + K+ SHD SDHLA VRA GW++ R + E Y +N L APS++ I
Sbjct: 946 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHG 1005
Query: 593 LRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
L K+F + + LV DC ++ CN + +E ++ V+ GLYP + + Q GK
Sbjct: 1006 LIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ-GK 1062
Score = 569 (205.4 bits), Expect = 8.5e-123, Sum P(2) = 8.5e-123
Identities = 116/204 (56%), Positives = 147/204 (72%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP ++ +L AI Q+ VV+ISG+TGCGKTT++PQ +LE ++ RGA C++I TQPRR
Sbjct: 462 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRR 521
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKGV 126
ISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+GV
Sbjct: 522 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 581
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+HVIVDEVHER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +PG
Sbjct: 582 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 641
Query: 187 FTYPVRTHFLEDILDMTGYRLTPY 210
F YPV+ H+LEDIL G P+
Sbjct: 642 FMYPVKEHYLEDILAKLGKHQYPH 665
Score = 155 (59.6 bits), Expect = 2.3e-63, Sum P(2) = 2.3e-63
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 564 WKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV----DCD--TSICNAW 617
W+D + Y +N L APS++ I L K+F + + LV DC ++ CN +
Sbjct: 980 WQDRS---SRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEY 1036
Query: 618 GRDERFIRAVICYGLYPGI-----SSIVQNGK----SSSLKTMEDGQVFLYSNSVNARES 668
+E ++ V+ GLYP + + + GK S + +T + G + L+ +++N +
Sbjct: 1037 SEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREAT 1095
Query: 669 EIPYPWLVFNEKMKVN-SVFLKDSTAVSD-SVLLLFGGSI 706
+ WL + +K N SVF++DS+ V +VLLL G +
Sbjct: 1096 RLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1135
Score = 39 (18.8 bits), Expect = 7.0e-67, Sum P(2) = 7.0e-67
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 118 LVDRNLKGVTHVIVDEVHERGMNE 141
LVDRN + +TH + + R + E
Sbjct: 345 LVDRNNEPLTHAMYNLASLRELGE 368
Score = 37 (18.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 16/51 (31%), Positives = 22/51 (43%)
Query: 469 AIEYLKIIGALDHNEELTVLGQY-LAMLPMEPKLGKMLILGAIFNCLEPVL 518
A + LK +G +D N E Y LA L +LG+ EP+L
Sbjct: 336 ACKKLKSLGLVDRNNEPLTHAMYNLASLR---ELGETQRRPCTIQVPEPIL 383
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 675 (242.7 bits), Expect = 9.1e-123, Sum P(2) = 9.1e-123
Identities = 160/418 (38%), Positives = 232/418 (55%)
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDC-IGFNLIEYVLCYICEKERPGAVLVFMTGWDD 298
+ED L ++Y + R S +C + +L+ ++ +I + PG +L F+ GW +
Sbjct: 623 LEDILAKLGKHQYLHRHRHHES--EDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQE 680
Query: 299 INSLNDKLQANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
I + +LQ LG ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETS
Sbjct: 681 IKGVQQRLQ--EALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETST 738
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRC 417
TIND+V V+D G KE YD SCL W+S + Q G Y L+PR
Sbjct: 739 TINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRS 798
Query: 418 VYDAFAEYQLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
+ +Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ I
Sbjct: 799 RLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEI 858
Query: 477 GALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDK 536
G LD E LT LGQ LA + EP+L K ++L AIF CL P+L +V+ L+ RDPF + +
Sbjct: 859 GVLDQREYLTTLGQRLAHISTEPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQN 917
Query: 537 KDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAER--GLAGYE-YCWKNFLSAPSMKVIDS 592
+ + K+ SHD SDHLA VRA GW++ R + E Y +N L APS++ I
Sbjct: 918 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHG 977
Query: 593 LRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
L K+F + + LV DC ++ CN + +E ++ V+ GLYP + + Q GK
Sbjct: 978 LIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ-GK 1034
Score = 570 (205.7 bits), Expect = 9.1e-123, Sum P(2) = 9.1e-123
Identities = 116/198 (58%), Positives = 145/198 (73%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP ++ +L AI Q+ VV+ISG+TGCGKTT++PQ +LE +T RGA C++I TQPRR
Sbjct: 434 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKGV 126
ISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+GV
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 553
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+HVIVDEVHER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +PG
Sbjct: 554 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 613
Query: 187 FTYPVRTHFLEDILDMTG 204
F YPV+ H+LEDIL G
Sbjct: 614 FMYPVKEHYLEDILAKLG 631
Score = 155 (59.6 bits), Expect = 1.5e-63, Sum P(2) = 1.5e-63
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 564 WKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV----DCD--TSICNAW 617
W+D + Y +N L APS++ I L K+F + + LV DC ++ CN +
Sbjct: 952 WQDRS---SRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEY 1008
Query: 618 GRDERFIRAVICYGLYPGI-----SSIVQNGK----SSSLKTMEDGQVFLYSNSVNARES 668
+E ++ V+ GLYP + + + GK S + +T + G + L+ +++N +
Sbjct: 1009 SEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREAT 1067
Query: 669 EIPYPWLVFNEKMKVN-SVFLKDSTAVSD-SVLLLFGGSI 706
+ WL + +K N SVF++DS+ V +VLLL G +
Sbjct: 1068 RLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1107
Score = 39 (18.8 bits), Expect = 9.6e-67, Sum P(2) = 9.6e-67
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 118 LVDRNLKGVTHVIVDEVHERGMNE 141
LVDRN + +TH + + R + E
Sbjct: 317 LVDRNNEPLTHAMYNLASLRELGE 340
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 469 AIEYLKIIGALDHNEELTVLGQY-LAMLPMEPKLGKMLILGAIFNCLEPVL----TIVAG 523
A + LK +G +D N E Y LA L +LG+ EP+L T +
Sbjct: 308 ACKKLKSLGLVDRNNEPLTHAMYNLASLR---ELGETQRRPCTIQVPEPILRKIETFLNH 364
Query: 524 LSVRDPFLAP 533
V ++AP
Sbjct: 365 YPVESSWIAP 374
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 683 (245.5 bits), Expect = 1.0e-122, Sum P(2) = 1.0e-122
Identities = 161/418 (38%), Positives = 234/418 (55%)
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDC-IGFNLIEYVLCYICEKERPGAVLVFMTGWDD 298
+ED L ++Y + R S +C + +L+ ++ +I + PG +L F+ GW +
Sbjct: 649 LEDILAKLGKHQYPHRHRHHES--EDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQE 706
Query: 299 INSLNDKLQANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
I + +LQ LG ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETSI
Sbjct: 707 IKGVQQRLQ--EALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSI 764
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRC 417
TIND+V V+D G KE YD SCL W+S + Q G Y L+PR
Sbjct: 765 TINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRS 824
Query: 418 VYDAFAEYQLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
+ A +Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ I
Sbjct: 825 RLEKMAPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEI 884
Query: 477 GALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDK 536
G LD E LT LGQ LA + +P+L K ++L AIF CL P+L +V+ L+ RDPF + +
Sbjct: 885 GVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQN 943
Query: 537 KDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAER--GLAGYE-YCWKNFLSAPSMKVIDS 592
+ + K+ SHD SDHLA VRA GW++ R + E Y +N L APS++ I
Sbjct: 944 RAEVDKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHG 1003
Query: 593 LRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
L K+F + + LV DC ++ CN + +E ++ V+ GLYP + + Q GK
Sbjct: 1004 LIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ-GK 1060
Score = 562 (202.9 bits), Expect = 1.0e-122, Sum P(2) = 1.0e-122
Identities = 114/204 (55%), Positives = 146/204 (71%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP ++ +L AI Q+ VV+I+G+TGCGKTT++PQ +LE +T RGA C++I TQPRR
Sbjct: 460 LPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 519
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKGV 126
ISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+GV
Sbjct: 520 ISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 579
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+HV+VDE HER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +PG
Sbjct: 580 SHVVVDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 639
Query: 187 FTYPVRTHFLEDILDMTGYRLTPY 210
F YPV+ H+LEDIL G P+
Sbjct: 640 FMYPVKEHYLEDILAKLGKHQYPH 663
Score = 155 (59.6 bits), Expect = 1.6e-62, Sum P(2) = 1.6e-62
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 564 WKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV----DCD--TSICNAW 617
W+D + Y +N L APS++ I L K+F + + LV DC ++ CN +
Sbjct: 978 WQDRS---SRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEY 1034
Query: 618 GRDERFIRAVICYGLYPGI-----SSIVQNGK----SSSLKTMEDGQVFLYSNSVNARES 668
+E ++ V+ GLYP + + + GK S + +T + G + L+ +++N +
Sbjct: 1035 SEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREAT 1093
Query: 669 EIPYPWLVFNEKMKVN-SVFLKDSTAVSD-SVLLLFGGSI 706
+ WL + +K N SVF++DS+ V +VLLL G +
Sbjct: 1094 RLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1133
Score = 39 (18.8 bits), Expect = 3.4e-69, Sum P(3) = 3.4e-69
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 118 LVDRNLKGVTHVIVDEVHERGMNE 141
LVDRN + +TH + + R + E
Sbjct: 343 LVDRNNEPLTHAMYNLASLRELGE 366
Score = 37 (18.1 bits), Expect = 3.4e-69, Sum P(3) = 3.4e-69
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 62 CTQPRRISAMSVSERVASERGEKLGESV 89
C++P R + +E E GE G V
Sbjct: 39 CSRPDRTQEAAEAEAAPGEPGEGDGSVV 66
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 671 (241.3 bits), Expect = 3.8e-122, Sum P(2) = 3.8e-122
Identities = 159/419 (37%), Positives = 233/419 (55%)
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPD-C-IGFNLIEYVLCYICEKERPGAVLVFMTGWD 297
+ED L ++Y + R + D C + +L+ ++ +I + PG +L F+ GW
Sbjct: 651 LEDILAKLGKHQYPHRHRHHEWPRSEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQ 710
Query: 298 DINSLNDKLQANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETS 356
+I + +LQ LG ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETS
Sbjct: 711 EIKGVQQRLQ--EALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETS 768
Query: 357 ITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPR 416
IT+ND+V V+D G KE YD SCL W+S + Q G Y L+PR
Sbjct: 769 ITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPR 828
Query: 417 CVYDAFAEYQLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKI 475
+ +Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+
Sbjct: 829 SRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQE 888
Query: 476 IGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMD 535
IG LD E LT LGQ LA + +P+L K ++L AIF CL P+L +V+ L+ RDPF + +
Sbjct: 889 IGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQ 947
Query: 536 KKDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAER--GLAGYE-YCWKNFLSAPSMKVID 591
+ + K+ SHD SDHLA VRA GW++ R + E Y +N L APS++ I
Sbjct: 948 NRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIH 1007
Query: 592 SLRKEFLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
L K+F + + LV DC ++ CN + +E ++ V+ GLYP + + Q GK
Sbjct: 1008 GLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ-GK 1065
Score = 569 (205.4 bits), Expect = 3.8e-122, Sum P(2) = 3.8e-122
Identities = 116/204 (56%), Positives = 147/204 (72%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP ++ +L AI Q+ VV+ISG+TGCGKTT++PQ +LE ++ RGA C++I TQPRR
Sbjct: 462 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRR 521
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKGV 126
ISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+GV
Sbjct: 522 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 581
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+HVIVDEVHER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +PG
Sbjct: 582 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 641
Query: 187 FTYPVRTHFLEDILDMTGYRLTPY 210
F YPV+ H+LEDIL G P+
Sbjct: 642 FMYPVKEHYLEDILAKLGKHQYPH 665
Score = 155 (59.6 bits), Expect = 2.3e-63, Sum P(2) = 2.3e-63
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 564 WKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV----DCD--TSICNAW 617
W+D + Y +N L APS++ I L K+F + + LV DC ++ CN +
Sbjct: 983 WQDRS---SRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEY 1039
Query: 618 GRDERFIRAVICYGLYPGI-----SSIVQNGK----SSSLKTMEDGQVFLYSNSVNARES 668
+E ++ V+ GLYP + + + GK S + +T + G + L+ +++N +
Sbjct: 1040 SEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREAT 1098
Query: 669 EIPYPWLVFNEKMKVN-SVFLKDSTAVSD-SVLLLFGGSI 706
+ WL + +K N SVF++DS+ V +VLLL G +
Sbjct: 1099 RLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1138
Score = 39 (18.8 bits), Expect = 3.1e-66, Sum P(2) = 3.1e-66
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 118 LVDRNLKGVTHVIVDEVHERGMNE 141
LVDRN + +TH + + R + E
Sbjct: 345 LVDRNNEPLTHAMYNLASLRELGE 368
Score = 37 (18.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 16/51 (31%), Positives = 22/51 (43%)
Query: 469 AIEYLKIIGALDHNEELTVLGQY-LAMLPMEPKLGKMLILGAIFNCLEPVL 518
A + LK +G +D N E Y LA L +LG+ EP+L
Sbjct: 336 ACKKLKSLGLVDRNNEPLTHAMYNLASLR---ELGETQRRPCTIQVPEPIL 383
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 674 (242.3 bits), Expect = 3.0e-121, Sum P(3) = 3.0e-121
Identities = 161/451 (35%), Positives = 251/451 (55%)
Query: 241 EDTLKAANFNEYSSQTRESLSCWN----PDCIGFNLIEYVLCYICEKERPGAVLVFMTGW 296
E +L A+ N+ ++ RE L ++ + + +LI ++L IC GA+L+F+ G+
Sbjct: 483 ESSLVQASGNDLGAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICNSSDGGAILIFLPGY 542
Query: 297 DDINSLNDKL--QANRILGDP-TRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
D+I SL D++ R + + ++ + H +M + +Q+ + P SG+RKI+L+TNIA
Sbjct: 543 DEIISLRDRIIFDDKRFVDNAHSKYQVFMLHSNMQTLDQKNVLKTPPSGIRKIILSTNIA 602
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRL 413
ETSIT+NDVVFVID GK KE S+DAL+ + L WIS S +PG C+ L
Sbjct: 603 ETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISKASAIQRRGRAGRCRPGVCFHL 662
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGT--IAGFLSRALQSPELLAVQNAIE 471
+ R + E+Q PE+ R PLQ LCL K L + FL +A P L V+NAI+
Sbjct: 663 FSRLRFQNMLEFQTPELRRMPLQELCLHTKLLAPVNCPVVDFLMKAPDPPPALIVRNAIQ 722
Query: 472 YLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFL 531
LK I A+D E+LT LG +LA LP+EP LGKM++ + CL+P+LTI L+ RDPF+
Sbjct: 723 MLKKIDAMDVWEDLTELGYHLAELPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFV 782
Query: 532 APM--DKKDLAEAAKSQFSHD-YSDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPS 586
P +K A + + + +SDH+ L+RAF+ W+ A G+E +C KNFLS +
Sbjct: 783 LPTVASQKRAAMLCRKRLAAGTFSDHMVLLRAFQAWQKARSD--GWERVFCEKNFLSQAT 840
Query: 587 MKVIDSLRKEFLSLLKDTGLV----DCDTSICNAWGRDERFIRAVICYGLYPGISSIVQN 642
M++I +R + L L+ G V D N + ++A + G+YP + + +
Sbjct: 841 MEIIIGMRTQLLGQLRALGFVRARGGADIRDVNVNSENWAVVKAALVAGMYPNLVHV--D 898
Query: 643 GKSSSLKTMEDGQVFLYSNSV--NARESEIP 671
++ L ++ +V + SV A+ +IP
Sbjct: 899 RENLVLTGPKEKKVRFHPTSVLSQAQYKKIP 929
Score = 535 (193.4 bits), Expect = 3.0e-121, Sum P(3) = 3.0e-121
Identities = 120/272 (44%), Positives = 170/272 (62%)
Query: 4 FRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICT 63
FR++LP +++K ++ I +N+VV+I GETG GKTTQ+PQF+L+ + G C I CT
Sbjct: 99 FRQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYEN--GVPCRIFCT 156
Query: 64 QPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLV-DRN 122
QPRR++ ++V+ERVA+ER EK+G++VGY++RLE T L FCT GILLR L+ D
Sbjct: 157 QPRRLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTLMAGDSA 216
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L VTHVIVDEVHER DFLLI L+D+L + L+L++ SA LDA LF YFG VI
Sbjct: 217 LSTVTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLFIKYFGSCPVI 276
Query: 183 NIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVED 242
+I G + V+ FLEDIL TGY ++M K K+ R+ K Q ++ E
Sbjct: 277 HIQGRPFEVKEMFLEDILRSTGYT-----------NKEMIKYKKEKQREEKQQ-STLTEW 324
Query: 243 TLKAANFNEYSSQTRESLSCWNPDCIGFNLIE 274
N + S+ R S++ + + +NL++
Sbjct: 325 CCAQENSSNPESRRRRSVASVSEE---YNLLD 353
Score = 50 (22.7 bits), Expect = 3.0e-121, Sum P(3) = 3.0e-121
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 660 SNSVNARESEIPYPWLVFNEKMKVNSVF-LKDSTAVSDSVLLLFGG 704
SN A +P WL+++E + + + ++ + V+ + LF G
Sbjct: 931 SNGQAAAVQALPTDWLIYDEMTRAHRIANIRCCSVVTPVTVALFSG 976
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 703 (252.5 bits), Expect = 6.3e-121, Sum P(2) = 6.3e-121
Identities = 160/413 (38%), Positives = 238/413 (57%)
Query: 241 EDTLKAANFNEYSSQTRESLSCWN----PDCIGFNLIEYVLCYICEKERPGAVLVFMTGW 296
E +L N ++ S++ RE L ++ + + +LI ++L IC A+L+F+ G+
Sbjct: 573 ESSLVHTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHGCHKCAILIFLPGY 632
Query: 297 DDINSLNDKL--QANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAE 354
D+I L D++ R + R + H +M +S+Q+ + P +GVRKI+L+TNIAE
Sbjct: 633 DEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAE 692
Query: 355 TSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLY 414
TSIT+NDVVFVID GK KE S+DALN + L WIS S +PG C+RL+
Sbjct: 693 TSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRCRPGICFRLF 752
Query: 415 PRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGT--IAGFLSRALQSPELLAVQNAIEY 472
R + E+Q PE+LR PLQ LCL K L IA FL +A + P L V+NA++
Sbjct: 753 SRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQM 812
Query: 473 LKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLA 532
LK I A+D E+LT LG +LA LP+EP LGKM++ + CL+P+LTI L+ RDPF+
Sbjct: 813 LKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVL 872
Query: 533 PMD--KKDLAEAAKSQFSHD-YSDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPSM 587
P +K A + +F+ +SDH+AL+RAF+ W+ A G+E +C KNFLS +M
Sbjct: 873 PTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSD--GWERAFCEKNFLSQATM 930
Query: 588 KVIDSLRKEFLSLLKDTGLVDC----DTSICNAWGRDERFIRAVICYGLYPGI 636
++I +R + L L+ +G V D N + ++A + G+YP +
Sbjct: 931 EIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNL 983
Score = 528 (190.9 bits), Expect = 6.3e-121, Sum P(2) = 6.3e-121
Identities = 116/247 (46%), Positives = 160/247 (64%)
Query: 4 FRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICT 63
FR++LP ++++ ++ I +N+VV+I GETG GKTTQ+PQF+L+ + G C I CT
Sbjct: 188 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKN--GIPCRIFCT 245
Query: 64 QPRRISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLV-DR 121
QPRR++A++V+ERVA+ER E++G+++GY++RLE + T L FCT G+LLR L+ D
Sbjct: 246 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRTLMAGDS 305
Query: 122 NLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATV 181
L VTHVIVDEVHER DFLL L+DLL + P L+L+L SA LD LF YFG V
Sbjct: 306 TLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPV 365
Query: 182 INIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA---S 238
I I G + V+ FLEDIL TGY N+ + +K KQ K++S + S
Sbjct: 366 IYIQGRPFEVKEMFLEDILRTTGYT----NK-----EMLKYKKEKQREEKQQSTLTEWYS 416
Query: 239 AVEDTLK 245
A E+T K
Sbjct: 417 AQENTFK 423
Score = 39 (18.8 bits), Expect = 3.8e-46, Sum P(2) = 3.8e-46
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 823 RAGYAAPSYRTKQLKNGQFRSTVEFNGMEIMGQP 856
RAG P + +F++ +EF E++ P
Sbjct: 739 RAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMP 772
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 662 (238.1 bits), Expect = 8.1e-121, Sum P(2) = 8.1e-121
Identities = 162/486 (33%), Positives = 258/486 (53%)
Query: 270 FNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMAS 329
F LIE +L YI PGAVLVF+ GW+ I ++ L+ N G+ R +L H +
Sbjct: 626 FELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGNH-RYQILPLHSQIPR 684
Query: 330 SEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSW 389
EQR +FD +GV K++L+TNIAETSITINDVV+VID K K + A NN + W
Sbjct: 685 EEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVW 744
Query: 390 ISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGT 449
S + V+PG C+ L R +D + PE+ RTPL + L IK LRLG
Sbjct: 745 ASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGG 804
Query: 450 IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGA 509
I FL++A++ P L AV A L+ + ALD N+ELT LG+ LA LP+EP+ GKM+I+G
Sbjct: 805 IGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGC 864
Query: 510 IFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAER 569
IF + + TI A +PF++ + K L ++ + +SDH+AL+ F+ W DA
Sbjct: 865 IFYVGDAICTISAATCFPEPFIS--EGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARM 922
Query: 570 G--LAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV-DCD-TSICNAWGRDERF-- 623
G A +C L+ ++++ + + +L ++G DC T + G D
Sbjct: 923 GGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDV 982
Query: 624 IRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVN----ARESEIPYPWLVFNE 679
+ +++ +G+YP ++ + + + T E ++ +SVN +++ + P P+ VF E
Sbjct: 983 VISLLAFGVYP---NVCYHKEKRKILTTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGE 1039
Query: 680 KMKVNSVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRR 739
K++ ++ K T V+ LLLF Q DG + ++ ++ ++ A +R
Sbjct: 1040 KIRTRAISAKGMTLVTPLQLLLFASKKVQS--DGQIVLVDDWIRLQISHEAAACITALRA 1097
Query: 740 ELDELI 745
++ L+
Sbjct: 1098 AMEALV 1103
Score = 567 (204.7 bits), Expect = 8.1e-121, Sum P(2) = 8.1e-121
Identities = 116/224 (51%), Positives = 158/224 (70%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP K ++ +L AISQN VVI+ G TGCGKTTQVPQFIL+ I + R A C+I
Sbjct: 377 ILQERELLPVKKFESEILEAISQNPVVIVRGATGCGKTTQVPQFILDDFIQNDRAAECNI 436
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRD-TRLLFCTTGILLRRLLV 119
+ TQPRRISA+SV+ERVA ERGE+ G+S GY VR E + R ++FCT G+LLR+L
Sbjct: 437 VVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 494
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGA 179
+ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 495 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 554
Query: 180 TVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQI----DDYGQE 219
+I + G TYPV+ +FLED + MT + P ++ DD G E
Sbjct: 555 PIIEVYGRTYPVQEYFLEDCIQMTHFIPPPKDKKKKDKDDDGSE 598
Score = 37 (18.1 bits), Expect = 6.6e-65, Sum P(2) = 6.6e-65
Identities = 12/68 (17%), Positives = 23/68 (33%)
Query: 35 CGKTTQVPQFILESEITSVRGAVCSIICTQPRRISAMSVSERVASERGEKLGESVGYKVR 94
CGK P + + + R + + + M S + + V Y VR
Sbjct: 12 CGKRKMTPSYEIRAVGNKNRQKFMCEVRVEGYNYTGMGNSTNKKDAQSNAARDFVNYLVR 71
Query: 95 LEGMKGRD 102
+ +K +
Sbjct: 72 INEVKSEE 79
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 659 (237.0 bits), Expect = 1.7e-120, Sum P(2) = 1.7e-120
Identities = 154/392 (39%), Positives = 220/392 (56%)
Query: 266 DCI-GFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKLQANRILGDP-TRVLLLTC 323
+C+ +LI ++ I PG +L F+ GW +I + +L +LG +R L+L
Sbjct: 690 ECVLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLL--EMLGSQNSRYLVLPV 747
Query: 324 HGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTS 383
H ++ +Q+ IF P GVRKIVLATNIAETSITIND+V V+D G KE YD S
Sbjct: 748 HSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVS 807
Query: 384 CLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIK 443
CL W+S + Q G Y L+PR D YQ+PEILRTPL++L +Q K
Sbjct: 808 CLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAK 867
Query: 444 -SLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLG 502
+ T FLS+AL SP++ AV A+ L+ IG LD E LT LG+ LA + +P+L
Sbjct: 868 IHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLA 927
Query: 503 KMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDY-SDHLALVRAF 561
K ++L +I+ CL P+L IV+ L+ RDPF + + + + AK+ S + SDHLA VRA
Sbjct: 928 KAIVLASIYRCLHPLLVIVSCLT-RDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAV 986
Query: 562 EGWKDAER---GLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV----DCD--TS 612
GW++ R A Y +L PS++ I+ L K+F L + LV DC +S
Sbjct: 987 AGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSSPSDCTMPSS 1046
Query: 613 ICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
+CN + +E ++ V+ GLYP + + Q GK
Sbjct: 1047 VCNQYSEEEELVKGVLMAGLYPNLIQVRQ-GK 1077
Score = 566 (204.3 bits), Expect = 1.7e-120, Sum P(2) = 1.7e-120
Identities = 116/212 (54%), Positives = 153/212 (72%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP K+ +L+AI QN VV+I+G+TGCGKTT++PQ +LE I RGA C+++ TQPRR
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRR 537
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKGV 126
ISA+SV++RVA E G + ++VGY+VRLE R LLFCT GILLR+L + +L+GV
Sbjct: 538 ISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGV 597
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+HV+VDEVHER +N DFLLI+LK + P+LRLVLMSAT D + FS YFGG V+ +PG
Sbjct: 598 SHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCPVVKVPG 657
Query: 187 FTYPVRTHFLEDILDMTG-YRLTPYN--QIDD 215
F YPV+ ++LE+IL G +R Y Q DD
Sbjct: 658 FMYPVKEYYLEEILAKLGRHRHRHYEIKQSDD 689
Score = 150 (57.9 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 51/181 (28%), Positives = 87/181 (48%)
Query: 538 DLAEAAKSQFS-HDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKE 596
D A+A S+ S D+ + V +E A Y +L PS++ I+ L K+
Sbjct: 965 DKAKAVLSRESGSDHLAFVRAVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQ 1024
Query: 597 FLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGI-----SSIVQNGK- 644
F L + LV DC +S+CN + +E ++ V+ GLYP + + + GK
Sbjct: 1025 FSENLYEAFLVSSPSDCTMPSSVCNQYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKF 1084
Query: 645 ---SSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNS-VFLKDSTAVSDSVLL 700
S + +T + G V L+ +++N S++ WL + +K N VF++DS+ V +L
Sbjct: 1085 KPNSYAYRT-KAGTVLLHKSTINREASKLYSRWLTYFMAVKSNGGVFVRDSSQVHPLAVL 1143
Query: 701 L 701
L
Sbjct: 1144 L 1144
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 1184 (421.8 bits), Expect = 2.5e-120, P = 2.5e-120
Identities = 271/793 (34%), Positives = 445/793 (56%)
Query: 2 LEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSII 61
LE R+ LP K + ++ A+ +NQV++I G TGCGKTTQVPQ +L+ I+ + C II
Sbjct: 147 LEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRII 206
Query: 62 CTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRD-TRLLFCTTGILLRRLLVD 120
CTQPRRISA++++E V+ ER E LG SVGY++RLE K R+ + +CTTG+LL++L D
Sbjct: 207 CTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSD 266
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+ ++ +I+DE+HER + D L+ +LK +L RP+L+++LMSAT+ + F YF
Sbjct: 267 PLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCP 326
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAV 240
+ I G +PV+ +LED+L T Y + + K+ P +R+ + + +
Sbjct: 327 MFRIEGVMFPVKMLYLEDVLSKTNYEFQKFRD----------RRPKRDPPERRMKHEAMI 376
Query: 241 EDTLKAANFNEYSSQTRESLSCWNPD-CIGFNLIEYVLCYICEKERPGAVLVFMTGWDDI 299
E L+ N Y S+ + L + C + I ++ YICE E GA+LVF+ G+D I
Sbjct: 377 EPYLRRIR-NSYDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKI 435
Query: 300 NSLNDKLQANRIL-GDPTR--VLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETS 356
+ L + L + G R + + H M S EQ+ +F P +G RK++++T IAETS
Sbjct: 436 SQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETS 495
Query: 357 ITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPR 416
+TI+DVV+VI+ G+ K T+YD N L W++ + V+PG CY L+ R
Sbjct: 496 VTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGRAGRVRPGICYNLFSR 555
Query: 417 CVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
D + PEILR+ L+S+ L +K L + FL + +P A++ +E LK I
Sbjct: 556 AREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVELLKRI 615
Query: 477 GALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDK 536
ALD LT LG +LA LP++P++GKM+++ A+F CL+P+ + A LS + PF +P+ K
Sbjct: 616 EALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLGK 675
Query: 537 KDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRK 595
+ + K + + + SDHL + ++D+ A ++C+KNFLS+ +++ ++ ++
Sbjct: 676 ESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAERDFCYKNFLSSMTLQQLERMKN 735
Query: 596 EFLSLL---KDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQN----GKSSSL 648
+F LL K +C + N +RA+I GLYP ++ + ++ + ++
Sbjct: 736 QFSELLYNYKFLASSNCKDAASNKNSEKIPLLRAIIGAGLYPNMAHLRKSRQIKNRVRAI 795
Query: 649 KTM--EDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGS 705
TM +DG+ V + +SVN+ ES + V+ ++ K +FL DST V L++FG
Sbjct: 796 HTMATDDGRRVNFHPSSVNSGESGFDSAYFVYFQRQKSTDLFLLDSTMVFPMALIIFGDG 855
Query: 706 ISQGEIDG--HLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPR-LNIHTHE-D 761
+ G +L + Y F N AD+ +R L++L+ K L P + + +E
Sbjct: 856 VEAGVTQNTPYLCVAKTYY-FKCNRETADVVIQLRSNLEKLLLKKALYPAPIEENGYEKQ 914
Query: 762 LLAAVRLLVAEDQ 774
L+ A+ LL++ D+
Sbjct: 915 LIKAIELLLSLDE 927
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 695 (249.7 bits), Expect = 5.5e-120, Sum P(2) = 5.5e-120
Identities = 196/619 (31%), Positives = 310/619 (50%)
Query: 213 IDDYGQEKMWKMSKQAP----RKRKSQIASAVEDTLKAANF--NEYSSQTRESLSCWNPD 266
+ +Y E +M++ P RKRK + ++ + +EYS +T+ ++S N
Sbjct: 577 VQEYFLEDCIQMTQFVPPPMDRKRKDKDDEGGDEDVNCNVICGSEYSPETKRAMSQLNEK 636
Query: 267 CIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGS 326
F LIE +L YI E PGAVLVF+ GW+ I + L+ N G + +L H
Sbjct: 637 ETSFELIEALLKYIETLEVPGAVLVFLPGWNLIYFMQKHLEMNPHFGGH-QYRILPLHSQ 695
Query: 327 MASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLL 386
+ EQR +F+ GV K++L+TNIAETSITINDVVFV+D K K + + NN +
Sbjct: 696 IPREEQRRVFEPVPDGVTKVILSTNIAETSITINDVVFVLDSCKQKVKLFTSHNNMTNYA 755
Query: 387 PSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLR 446
W S + V+PG C+ L R ++ + PEI RTPL + L IK LR
Sbjct: 756 TVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFEKLETHMTPEIFRTPLHEVALSIKLLR 815
Query: 447 LGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLI 506
LG I FLS+A++ P L AV A L+ + ALD N+ELT LG+ LA LP+EP+LGKM+I
Sbjct: 816 LGGIGNFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMI 875
Query: 507 LGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKD 566
+G IFN + V TI A +PF+ + K L ++ +SDH+AL+ F+ W +
Sbjct: 876 MGCIFNVGDAVCTISAATCFPEPFIN--EGKRLGFVHRNFAGSRFSDHVALLSVFQAWDE 933
Query: 567 AERGLAGYE--YCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVD-CDTS-ICNAWGRDER 622
G E +C L+ P++++ + + +L + G + C + + N G D
Sbjct: 934 VRVGGEDAEIRFCEHKRLNMPTLRMTWEAKVQLKEILVNVGFPEECLLNQVFNNVGPDNN 993
Query: 623 F--IRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNA----RESEIPYPWLV 676
+ +++ +G YP ++ + + + T E ++ +SVN + + P P+ V
Sbjct: 994 LDLVISLLTFGSYP---NVCYHKEKRKILTTEGRNALIHKSSVNCPFSNHDLKYPSPFFV 1050
Query: 677 FNEKMKVNSVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVADMYQC 736
F EK++ ++ K T VS L+LFG +G + + +++ + VA
Sbjct: 1051 FGEKIRTRAISAKSMTLVSPLQLILFGSKKITS--NGEVVELDDWIKLQIPHDVAAGVAG 1108
Query: 737 IRRELDELIQNKLLNPRL--NIHT-HEDLLAAVRLLVAEDQCEGRFIFGHQVFKPSKPSV 793
+R L+ L+ +P N+ +E LL +RL V+ G + S P
Sbjct: 1109 LRAGLEALVVEVTKDPEYIRNLDPLNERLLNVIRL-VSRPSSAGINLMA------SNPRF 1161
Query: 794 V-GAQPAFISRTESGPGGD 811
G +P ++RT+ G GGD
Sbjct: 1162 GDGPRPPKMARTDFGGGGD 1180
Score = 525 (189.9 bits), Expect = 5.5e-120, Sum P(2) = 5.5e-120
Identities = 103/213 (48%), Positives = 147/213 (69%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L R LP + ++++ I N VVII G TGCGKTTQVPQ+IL+ I R + C+I
Sbjct: 388 ILTERSQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDEFIKGGRASDCNI 447
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRD-TRLLFCTTGILLRRLLV 119
+ TQPRRISA+SV+ERV+ ERGE +G+S GY VR E R +LFCT G+LLR+L
Sbjct: 448 VVTQPRRISAVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHASILFCTVGVLLRKL-- 505
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGA 179
+ ++G++HVIVDE+HER +N DFLL+VL+D++ P++R++LMSAT+D +F YF
Sbjct: 506 ESGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYFFNC 565
Query: 180 TVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQ 212
VI + G +PV+ +FLED + MT + P ++
Sbjct: 566 PVIEVHGRAHPVQEYFLEDCIQMTQFVPPPMDR 598
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 659 (237.0 bits), Expect = 9.4e-120, Sum P(2) = 9.4e-120
Identities = 154/392 (39%), Positives = 220/392 (56%)
Query: 266 DCI-GFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKLQANRILGDP-TRVLLLTC 323
+C+ +LI ++ I PG +L F+ GW +I + +L +LG +R L+L
Sbjct: 690 ECVLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLL--EMLGSQNSRYLVLPV 747
Query: 324 HGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTS 383
H ++ +Q+ IF P GVRKIVLATNIAETSITIND+V V+D G KE YD S
Sbjct: 748 HSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVS 807
Query: 384 CLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIK 443
CL W+S + Q G Y L+PR D YQ+PEILRTPL++L +Q K
Sbjct: 808 CLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAK 867
Query: 444 -SLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLG 502
+ T FLS+AL SP++ AV A+ L+ IG LD E LT LG+ LA + +P+L
Sbjct: 868 IHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLA 927
Query: 503 KMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDY-SDHLALVRAF 561
K ++L +I+ CL P+L IV+ L+ RDPF + + + + AK+ S + SDHLA VRA
Sbjct: 928 KAIVLASIYRCLHPLLVIVSCLT-RDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAV 986
Query: 562 EGWKDAER---GLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV----DCD--TS 612
GW++ R A Y +L PS++ I+ L K+F L + LV DC +S
Sbjct: 987 AGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSSPSDCTMPSS 1046
Query: 613 ICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
+CN + +E ++ V+ GLYP + + Q GK
Sbjct: 1047 VCNQYSEEEELVKGVLMAGLYPNLIQVRQ-GK 1077
Score = 559 (201.8 bits), Expect = 9.4e-120, Sum P(2) = 9.4e-120
Identities = 115/212 (54%), Positives = 152/212 (71%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP K+ +L+AI QN VV+I+G+TGCGKTT++PQ +LE I RGA C+++ TQPRR
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRR 537
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKGV 126
ISA+SV++RVA E G + ++VGY+VRLE R LLFCT GILLR+L + +L+GV
Sbjct: 538 ISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGV 597
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+HV+VDEVHER +N DFLLI+LK + P+LRLVLMSAT D + FS YFG V+ +PG
Sbjct: 598 SHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDCPVVKVPG 657
Query: 187 FTYPVRTHFLEDILDMTG-YRLTPYN--QIDD 215
F YPV+ ++LE+IL G +R Y Q DD
Sbjct: 658 FMYPVKEYYLEEILAKLGRHRHRHYEIKQSDD 689
Score = 150 (57.9 bits), Expect = 1.2e-61, Sum P(2) = 1.2e-61
Identities = 51/181 (28%), Positives = 87/181 (48%)
Query: 538 DLAEAAKSQFS-HDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKE 596
D A+A S+ S D+ + V +E A Y +L PS++ I+ L K+
Sbjct: 965 DKAKAVLSRESGSDHLAFVRAVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQ 1024
Query: 597 FLSLLKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGI-----SSIVQNGK- 644
F L + LV DC +S+CN + +E ++ V+ GLYP + + + GK
Sbjct: 1025 FSENLYEAFLVSSPSDCTMPSSVCNQYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKF 1084
Query: 645 ---SSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNS-VFLKDSTAVSDSVLL 700
S + +T + G V L+ +++N S++ WL + +K N VF++DS+ V +L
Sbjct: 1085 KPNSYAYRT-KAGTVLLHKSTINREASKLYSRWLTYFMAVKSNGGVFVRDSSQVHPLAVL 1143
Query: 701 L 701
L
Sbjct: 1144 L 1144
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 1094 (390.2 bits), Expect = 6.8e-117, Sum P(2) = 6.8e-117
Identities = 248/620 (40%), Positives = 378/620 (60%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
ML R LP + + ++L+A+ Q+QVVI+ GETGCGK+TQVP F+LE ++ +G C I
Sbjct: 684 MLRSRMQLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEHQLA--QGKACKI 741
Query: 61 ICTQPRRISAMSVSERVASERGE---KLGES---VGYKVRLEGMKGRDTRLLFCTTGILL 114
CT+PRRISA+S++ RV+ E GE LG S VGY +RLE R+TRL+F TTGI++
Sbjct: 742 YCTEPRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRETRLVFATTGIVM 801
Query: 115 RRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSS 174
R L +L+ +TH+++DEVHER ++ DFLLIVLK L++RR +L++VLMSAT+DA+ FS+
Sbjct: 802 RMLEGSNDLRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKVVLMSATVDADRFSN 861
Query: 175 YFGGATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKS 234
Y GA V+N+PG T+PV+ +FLED +++TGY + ++ QE++ ++ + A + +S
Sbjct: 862 YLDGAPVLNVPGRTFPVQVNFLEDAVELTGYTID--QKVP---QERLVEIDEDAEVEPES 916
Query: 235 QIASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICE----KERPGAVL 290
+ + +LK YS++TR +L+ + I F+LI ++ I ++ A+L
Sbjct: 917 SSKTELLKSLKG-----YSTRTRNTLAQMDEYKIDFDLIVQLISRIASDPNYQDYSKAIL 971
Query: 291 VFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLAT 350
VF+ G +I +LND L +R L+ H ++A+ EQ F P G+RKIVLAT
Sbjct: 972 VFLPGIAEIRTLNDLLLGDRSFQQ--NWLVYPLHSTIATEEQEAAFLVPPHGMRKIVLAT 1029
Query: 351 NIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGEC 410
NIAET ITI DV VID GK +E +D S L+ ++IS + VQ G C
Sbjct: 1030 NIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFISRANAKQRRGRAGRVQQGLC 1089
Query: 411 YRLYPRCVYDAF-AEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNA 469
+ ++ + +DA A+ Q PE+LR LQ L +++K ++G I LS+AL P ++ A
Sbjct: 1090 FHMFTKYRHDAIMADQQTPEMLRLSLQDLAIRVKICKIGGIEETLSKALDPPSAKNIRRA 1149
Query: 470 IEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDP 529
I+ L + AL E+LT LG LA LP++ LGK+++LG+IF CL+ +T+ A LS + P
Sbjct: 1150 IDALIDVRALTQGEDLTPLGNQLARLPLDVFLGKLILLGSIFKCLDMAITVAAILSSKSP 1209
Query: 530 FLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAG-----YEYCWKNFLSA 584
F+AP ++ A+ + F SD L + A+ WK G +++C KNFLS
Sbjct: 1210 FVAPFGQRSQADTVRLGFRRGDSDILTVYNAYLSWKRVCLAATGNSSQEFQFCRKNFLSQ 1269
Query: 585 PSMKVIDSLRKEFLSLLKDT 604
++ I+ L+ + L L D+
Sbjct: 1270 QTLANIEDLKGQLLVSLVDS 1289
Score = 78 (32.5 bits), Expect = 6.8e-117, Sum P(2) = 6.8e-117
Identities = 37/147 (25%), Positives = 61/147 (41%)
Query: 625 RAVICYGLYPGIS-SIVQNGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMK 682
+AV+ + YP + V GK L+ + + Q + L+ +SVN +EI W+ + M+
Sbjct: 1337 QAVLSWSFYPKLLVRDVAGGKG--LRNVGNNQNISLHRSSVNRGHNEIR--WMSYYHMMQ 1392
Query: 683 VNSVFLK--DSTAVSDSVLLLFGGSISQGEIDGHLKMMGGYLEFFMNP-SVADMYQCIRR 739
L ++TAV + L G + G M G F + + +R
Sbjct: 1393 STKSALNAHETTAVEPFAIALLCGDVRCDMYSGVFVMDGNRARFAAPDWKTVLVVKTLRS 1452
Query: 740 ELDELIQNKLLNP-RLNIHTHEDLLAA 765
L EL+ NP +L H+ L A
Sbjct: 1453 RLRELLTRSFKNPGKLPTPQHQHWLEA 1479
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 1023 (365.2 bits), Expect = 5.1e-116, Sum P(3) = 5.1e-116
Identities = 225/627 (35%), Positives = 372/627 (59%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+++ R +LP +K K L + +NQVV+I+ ETGCGK+TQ+PQ+ILES I+ +G+ C+I
Sbjct: 618 VIKKRESLPVFKRKKEFLKCLQENQVVVITAETGCGKSTQIPQYILESFISQEKGSECNI 677
Query: 61 ICTQPRRISAMSVSERVASERG-----EKLGESVGYKVRLEGMKGRDTRLLFCTTGILLR 115
+CTQPRRISA+ V+ERV+ E +G VGY++R E + + TRLLFCTTGILLR
Sbjct: 678 VCTQPRRISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQSTRLLFCTTGILLR 737
Query: 116 RLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSY 175
R+L N+ ++H+I+DEVHER + DFLLI+L++++S+R +L+++LMSATL+A+ ++Y
Sbjct: 738 RILDVSNISDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSATLNAKQIANY 797
Query: 176 FGGA--TVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRK 233
F ++ +IPGFT+PV+ ++ ++L + + YN +Y ++ + +
Sbjct: 798 FKCTDDSIFSIPGFTFPVKNIYINEVLPL----INKYNP--NY-KDSITTTTTTTTTTTT 850
Query: 234 SQIASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFM 293
+ E+ L N+ + N D + +LI +++ + +K++ ++LVF+
Sbjct: 851 NDTNEDEEEILNN-KLNQLKISIDQKRI--NLDVVE-SLILHLVNGVLKKDK--SILVFV 904
Query: 294 TGWDDINSLNDKLQANRILGDPT-----RVLLLTCHGSMASSEQRLIFDEPESGVRKIVL 348
G DI L +L + + T R+ + H S++ +Q+ +F++ +G K+V+
Sbjct: 905 PGLSDILELCSRL--GKPISTFTEAICQRIWCVPLHSSLSPKDQQKVFEKAPNGRVKVVI 962
Query: 349 ATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPG 408
ATNIAETSITI DV V+DCG+ + +++++ S + W S S G
Sbjct: 963 ATNIAETSITIEDVEIVVDCGRVNQMTFNSITGNSVMSEEWTSKASCRQRAGRAGRTSSG 1022
Query: 409 ECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSL----RLGTIAGFLSRALQSPELL 464
C++++ + + + PEILRT LQ LCL +K + TI FL+RA++ P
Sbjct: 1023 LCFKVFTKSMESQLQDQDTPEILRTSLQQLCLHVKLFLKNNKNTTIQDFLNRAIEPPSSE 1082
Query: 465 AVQNAIEYLKIIGALDHNE----ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTI 520
+Q++I L I AL N+ ELT LG +LA LP++ +GKML+ G IF CL+P+LTI
Sbjct: 1083 QIQSSINELISIDALKINQQQQQELTPLGYHLASLPVDVYIGKMLLFGCIFRCLDPILTI 1142
Query: 521 VAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKN 580
A L+ + PFL P DK + K S + SDH L+ A+ W+ + + Y++C +N
Sbjct: 1143 AATLNYKSPFLNPPDKT-IRPMDKFS-SPNQSDHQTLINAYNSWRKSIQDGNEYQFCREN 1200
Query: 581 FLSAPSMKVIDSLRKEFLSLLKDTGLV 607
+LS P+++ I L+ +F+ +L + G +
Sbjct: 1201 YLSIPTLRTIQDLKLQFVEILSEIGFL 1227
Score = 113 (44.8 bits), Expect = 5.1e-116, Sum P(3) = 5.1e-116
Identities = 34/123 (27%), Positives = 67/123 (54%)
Query: 655 QVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLF--GGSISQGEID 712
+VF++ S N +E E YP++++N+K+K + +FL T +S LLLF GG+I EID
Sbjct: 1329 RVFIHPRSTNFKEGEWVYPFIIYNDKVKTSKLFLHHITNLSPLTLLLFSLGGNI---EID 1385
Query: 713 GHLKMMG--GYLEF-FMNPSVADMYQCIRRELDELIQNKLLNPRLNIHTHEDLLAAVRLL 769
+ + +L+F + + + + IR + L++ K+ P + + + +L+
Sbjct: 1386 KSYQTISLDKWLKFKATSGKIIVLLKEIRILFNHLLKQKIDQPSYSTSSSIIIDIITKLV 1445
Query: 770 VAE 772
++E
Sbjct: 1446 LSE 1448
Score = 50 (22.7 bits), Expect = 5.1e-116, Sum P(3) = 5.1e-116
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 613 ICNAWGRDERFIRAVICYGLYPGISSI 639
I N+ + I +V+C G+YP I+ I
Sbjct: 1262 IYNSNSSKSKIITSVLCAGMYPKIARI 1288
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 272/741 (36%), Positives = 414/741 (55%)
Query: 70 AMSVSERVASERGEKLGESV-GYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTH 128
A V + + E G S+ GY++R+E TRLL+CTTG+LLR+L D L V+H
Sbjct: 636 ATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSH 695
Query: 129 VIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPGFT 188
VIVDEVHER + DFLLI+LK++L +R +L L+LMSAT+D+E FS+YF ++ I G +
Sbjct: 696 VIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRS 755
Query: 189 YPVRTHFLEDILDMTGYRL---TPYNQ-IDDYGQEKMWKMSKQAPRKRKSQIASAVEDTL 244
YPV LEDI++ TG+ L + Y Q + +E ++ +A +K Q V +T
Sbjct: 756 YPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGGIKKHQEYIPV-NTG 814
Query: 245 KAANFN----EYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKER-P------GAVLVFM 293
+A+ N +YS++T+ ++ NP I +LI +L Y+ +R P GAVL+F+
Sbjct: 815 SSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLIYLEIPDRSPQFRNIEGAVLIFL 874
Query: 294 TGWDDINSLNDKLQANR-ILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNI 352
G I L D L +R + +V+ L H +++ +Q F P GVRKIVLATNI
Sbjct: 875 PGLAHIQQLYDLLSTDRRFFSERYKVIAL--HSILSTQDQAAAFTLPPPGVRKIVLATNI 932
Query: 353 AETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYR 412
AET ITI DVVFVID G+ KE Y + S L+ +++S S V+ G C+R
Sbjct: 933 AETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFR 992
Query: 413 LYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEY 472
+Y R ++ F +Y +PEILR PL+ LCL I LG+ FLS+AL P+L + NA+
Sbjct: 993 MYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNL 1052
Query: 473 LKIIGALDHNEE-LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFL 531
L+ IGA + NE LT LGQ+LA LP+ K+GKMLI GAIF CL+PV T+ A ++ + PF
Sbjct: 1053 LRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFT 1112
Query: 532 APMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYE----YCWKNFLSAPSM 587
P+ +KD A+ AKS + SDHL + A+ GWK A R GY YC +NFL+ S+
Sbjct: 1113 TPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKA-RQEGGYRSEIAYCRRNFLNRTSL 1171
Query: 588 KVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDER----------FIRAVICYGLYPGIS 637
++ +++E + L+K G TS N W + ++AV+ GLY +
Sbjct: 1172 LTLEDVKQELMKLVKAAGFSSSTTS--NDWEENRASQTLPFQEIALLKAVLAAGLYDNVG 1229
Query: 638 SIVQNGKSSSLKT-----MEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDST 692
I+ KS + +E Q + + Y WL++ EK++ V+L+++T
Sbjct: 1230 KIIYT-KSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETT 1288
Query: 693 AVSDSVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNP 752
++ +LLFGG I + L + G++ F +A +++ +R +D +++ KL NP
Sbjct: 1289 LITPFPVLLFGGDIEVQHRE-RLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENP 1347
Query: 753 RLNIHTHEDLLAAVRLLVAED 773
++++ + L L+ E+
Sbjct: 1348 KMSLENDKILQIITELIKTEN 1368
Score = 547 (197.6 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 122/294 (41%), Positives = 189/294 (64%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRG-AVCS 59
+L+ R+ LP +K +N ++ + +++VV+++GETG GK+TQVP F+LE + + G + C+
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 60 IICTQPRRISAMSVSERVASERGEKLGES-----VGYKVRLEGMKGRDTRLLFCTTGILL 114
I+CTQPRRISA+S++ RV E G + G GY++R+E TRLL+CTTG+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 115 RRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSS 174
R+L D L V+HVIVDEVHER + DFLLI+LK++L +R +L L+LMSAT+D+E FS+
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFST 741
Query: 175 YFGGATVINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQ-IDDYGQEKMWKMSKQAPR 230
YF ++ I G +YPV LEDI++ TG+ L + Y Q + +E ++ +A
Sbjct: 742 YFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGG 801
Query: 231 KRKSQIASAVEDTLKAANFN----EYSSQTRESLSCWNPDCIGFNLIEYVLCYI 280
+K Q V +T +A+ N +YS++T+ ++ NP I +LI +L Y+
Sbjct: 802 IKKHQEYIPV-NTGSSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLIYL 854
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 1103 (393.3 bits), Expect = 9.7e-112, P = 9.7e-112
Identities = 267/737 (36%), Positives = 417/737 (56%)
Query: 70 AMSVSERVASERGEKLGESV-GYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTH 128
A V + + E G S+ GY++R+E TRLL+CTTG+LLR+L D L V+H
Sbjct: 636 ATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSH 695
Query: 129 VIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPGFT 188
VIVDEVHER + DFLLI+LK++L +R +L L+LMSAT+D+E FS+YF ++ I G +
Sbjct: 696 VIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRS 755
Query: 189 YPVRTHFLEDILDMTGYRL---TPYNQ--IDDYGQEKMWKMSKQAPRKRKSQIASAVEDT 243
YPV LEDI++ TG+ L + Y Q +++ + + SK K+ + T
Sbjct: 756 YPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGGIKKYQEYIPVQTGT 815
Query: 244 LKAAN--FNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKER-P------GAVLVFMT 294
N + +YS++T+ ++ NP I +LI +L Y+ +R P GAVL+F+
Sbjct: 816 SADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIFLP 875
Query: 295 GWDDINSLNDKLQANR-ILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
G I L D L +R + +V+ L H +++ +Q F P GVRKIVLATNIA
Sbjct: 876 GLAHIQQLYDLLSTDRRFFSERYKVIAL--HSILSTQDQAAAFTLPPQGVRKIVLATNIA 933
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRL 413
ET ITI DVVFVID G+ KE Y + S L+ +++S S V+ G C+R+
Sbjct: 934 ETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRM 993
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
Y R ++ F +Y +PEILR PL+ LCL I LG+ FLS+AL P+L + NA+ L
Sbjct: 994 YTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLL 1053
Query: 474 KIIGALDHNE-ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLA 532
+ IGA + NE +LT LGQ+LA LP+ K+GKMLI GAIF CL+PV T+ A ++ + PF
Sbjct: 1054 RKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTT 1113
Query: 533 PMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYE----YCWKNFLSAPSMK 588
P+ +KD A+ AKS + SDHL + A+ GWK A++ GY YC +NFL+ S+
Sbjct: 1114 PIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKAQQE-GGYRSEIAYCRRNFLNRTSLL 1172
Query: 589 VIDSLRKEFLSLLK------DTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQN 642
++ +++ +LLK T S ++ ++ ++AV+ GLY + I+
Sbjct: 1173 TLEEIKRRRTTLLKLIFYSIKTYYSSSRASQTLSF-QEIALLKAVLTAGLYDNVGKIIYT 1231
Query: 643 G------KSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSD 696
K + + G+ ++ +SVN R+ + Y WL++ EK++ V+L+++T ++
Sbjct: 1232 KSVDVTEKLACIVETAQGKAQVHPSSVN-RDLQT-YGWLLYQEKIRYARVYLRETTLITP 1289
Query: 697 SVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPRLNI 756
+LLFGG I + L + G++ F +A +++ +R +D +++ KL NP++++
Sbjct: 1290 FSVLLFGGDIEVQHRE-RLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENPKMSL 1348
Query: 757 HTHEDLLAAVRLLVAED 773
+ L L+ E+
Sbjct: 1349 ENDKILQIITELIKTEN 1365
Score = 549 (198.3 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 119/293 (40%), Positives = 185/293 (63%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRG-AVCS 59
+L+ R+ LP +K +N ++ + +++VV+++GETG GK+TQVP F+LE + + G + C+
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 60 IICTQPRRISAMSVSERVASERGEKLGES-----VGYKVRLEGMKGRDTRLLFCTTGILL 114
I+CTQPRRISA+S++ RV E G + G GY++R+E TRLL+CTTG+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 115 RRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSS 174
R+L D L V+HVIVDEVHER + DFLLI+LK++L +R +L L+LMSAT+D+E FS+
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFST 741
Query: 175 YFGGATVINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQ--IDDYGQEKMWKMSKQAP 229
YF ++ I G +YPV LEDI++ TG+ L + Y Q +++ + + SK
Sbjct: 742 YFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGG 801
Query: 230 RKRKSQIASAVEDTLKAAN--FNEYSSQTRESLSCWNPDCIGFNLIEYVLCYI 280
K+ + T N + +YS++T+ ++ NP I +LI +L Y+
Sbjct: 802 IKKYQEYIPVQTGTSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTYL 854
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
Identities = 266/738 (36%), Positives = 409/738 (55%)
Query: 70 AMSVSERVASERGEKLGESV-GYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTH 128
A V + + E G S+ GY++R+E TRLL+CTTG+LLR+L D L V+H
Sbjct: 636 ATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSH 695
Query: 129 VIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPGFT 188
VIVDEVHER + DFLLI+LK++L +R +L L+LMSAT+D+E FS+YF ++ I G +
Sbjct: 696 VIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRS 755
Query: 189 YPVRTHFLEDILDMTGYRL---TPYNQ--IDDYGQEKMWKMSKQAPRKRKSQIASAVEDT 243
YPV LEDI++ TG+ L + Y Q +++ + + SK K+ + T
Sbjct: 756 YPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGGIKKYQEYIPVQTGT 815
Query: 244 LKAAN--FNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKER-P------GAVLVFMT 294
N + +YS++T+ ++ NP I +LI +L Y+ +R P GAVL+F+
Sbjct: 816 SADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIFLP 875
Query: 295 GWDDINSLNDKLQANR-ILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
G I L D L +R + +V+ L H +++ +Q F P GVRKIVLATNIA
Sbjct: 876 GLAHIQQLYDLLSTDRRFFSERYKVIAL--HSILSTQDQAAAFTLPPQGVRKIVLATNIA 933
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRL 413
ET ITI DVVFVID G+ KE Y + S L+ +++S S V+ G C+R+
Sbjct: 934 ETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRM 993
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
Y R ++ F +Y +PEILR PL+ LCL I LG+ FLS+AL P+L + NA+ L
Sbjct: 994 YTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLL 1053
Query: 474 KIIGALDHNE-ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLA 532
+ IGA + NE +LT LGQ+LA LP+ K+GKMLI GAIF CL+PV T+ A ++ + PF
Sbjct: 1054 RKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTT 1113
Query: 533 PMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYE----YCWKNFLSAPSMK 588
P+ +KD A+ AKS + SDHL + A+ GWK A++ GY YC +NFL+ S+
Sbjct: 1114 PIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKAQQE-GGYRSEIAYCRRNFLNRTSLL 1172
Query: 589 VIDSLRKEFLSLLKD---TGLVDCDTSICNAWGRDERF-----IRAVICYGLYPGISSIV 640
++ R L L+ + T + T + + F ++AV+ GLY + I+
Sbjct: 1173 TLERRRTTLLKLMNENAFTHIFIAFTFYSSRASQTLSFQEIALLKAVLTAGLYDNVGKII 1232
Query: 641 QNGKSSSLKT-----MEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVS 695
KS + +E Q + + Y WL++ EK++ V+L+++T ++
Sbjct: 1233 YT-KSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTYGWLLYQEKIRYARVYLRETTLIT 1291
Query: 696 DSVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPRLN 755
+LLFGG I + L + G++ F +A +++ +R +D +++ KL NP+++
Sbjct: 1292 PFSVLLFGGDIEVQHRE-RLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENPKMS 1350
Query: 756 IHTHEDLLAAVRLLVAED 773
+ + L L+ E+
Sbjct: 1351 LENDKILQIITELIKTEN 1368
Score = 549 (198.3 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 119/293 (40%), Positives = 185/293 (63%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRG-AVCS 59
+L+ R+ LP +K +N ++ + +++VV+++GETG GK+TQVP F+LE + + G + C+
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 60 IICTQPRRISAMSVSERVASERGEKLGES-----VGYKVRLEGMKGRDTRLLFCTTGILL 114
I+CTQPRRISA+S++ RV E G + G GY++R+E TRLL+CTTG+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 115 RRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSS 174
R+L D L V+HVIVDEVHER + DFLLI+LK++L +R +L L+LMSAT+D+E FS+
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFST 741
Query: 175 YFGGATVINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQ--IDDYGQEKMWKMSKQAP 229
YF ++ I G +YPV LEDI++ TG+ L + Y Q +++ + + SK
Sbjct: 742 YFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGG 801
Query: 230 RKRKSQIASAVEDTLKAAN--FNEYSSQTRESLSCWNPDCIGFNLIEYVLCYI 280
K+ + T N + +YS++T+ ++ NP I +LI +L Y+
Sbjct: 802 IKKYQEYIPVQTGTSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTYL 854
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 513 (185.6 bits), Expect = 9.5e-110, Sum P(3) = 9.5e-110
Identities = 110/258 (42%), Positives = 161/258 (62%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP +K+++ L+ +I NQ++II G+TGCGKTTQ+PQF++E I S C+I+ TQ
Sbjct: 714 RTELPIFKQRSHLIESIKNNQIIIIMGDTGCGKTTQIPQFVIEDMIDSGHAPYCNIVMTQ 773
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDT-RLLFCTTGILLRRLLVDRNL 123
PRRIS + +ER+A ER EK+G++VGY++R + ++ T +LL CT GILL+R+ D L
Sbjct: 774 PRRISVLGAAERMAYERLEKVGDTVGYQIRFDNVQPLGTSKLLVCTPGILLKRMYSDMKL 833
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVIN 183
V+H+ +DEVHER ++ DFLLI+LK LL+ LR++LMSAT+D L S+YFG VI
Sbjct: 834 HNVSHLFIDEVHERDIHTDFLLIILKKLLADNNNLRVILMSATMDNSLVSAYFGTCPVIK 893
Query: 184 IPGFTYPVRTHFLEDILDMTGYRLTPYN--QIDDYGQEKMWKMSKQAPRKRKSQIASAVE 241
+ + + + +FLEDI Y Q DD E + ++ K ++S E
Sbjct: 894 LTSYHHIAQEYFLEDISKQLNDPTISYRDEQSDDVDHEMILQLIVHIVTK----VSSTSE 949
Query: 242 DTLKAANFN-EYSSQTRE 258
D++ E SQTRE
Sbjct: 950 DSILIFLPGWEDISQTRE 967
Score = 495 (179.3 bits), Expect = 9.5e-110, Sum P(3) = 9.5e-110
Identities = 99/243 (40%), Positives = 151/243 (62%)
Query: 288 AVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIV 347
++L+F+ GW+DI+ + ++ + +L + L+L H S++ Q +F++P +RKIV
Sbjct: 951 SILIFLPGWEDISQTRELMRRHPMLRNENEFLILPLHSSVSMQLQAKVFEKPPPKIRKIV 1010
Query: 348 LATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQP 407
L+TNIAETSITINDVV+VID K K ++ + + W S V+
Sbjct: 1011 LSTNIAETSITINDVVYVIDSAKVKLKYHETQRDLTLFQTVWACKSSLKQRRGRAGRVRK 1070
Query: 408 -GECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAV 466
G CY + R Y+ E+QL E+ R PL LCLQ+K L LG + GFLS AL+ PE ++
Sbjct: 1071 DGVCYHMVSRDRYNTLEEFQLSEMRRMPLHELCLQVKVLVLGDVIGFLSEALEPPETKSI 1130
Query: 467 QNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSV 526
NAI L +GAL+ N+ELT LG L+ +P++P++GKM+ILG+ F CL+P+LTI + +
Sbjct: 1131 DNAINLLIDLGALNANQELTPLGLQLSFIPVDPRIGKMIILGSYFRCLDPILTIASFSNQ 1190
Query: 527 RDP 529
++P
Sbjct: 1191 KNP 1193
Score = 213 (80.0 bits), Expect = 9.5e-110, Sum P(3) = 9.5e-110
Identities = 58/216 (26%), Positives = 109/216 (50%)
Query: 544 KSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKD 603
K+ + SDHL+ + F GW + +YC ++FLS P ++ I ++K+ LS + D
Sbjct: 1229 KNLYPELQSDHLSFLNIFNGWLQSRMDGTEDQYC-QDFLSIPLLQQILKVKKQLLSTIND 1287
Query: 604 TGLVDC---DTSICNAWGRDER----FIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQV 656
G+++ D + N++ + IRA+IC GL+P I+ + K KT+ +
Sbjct: 1288 LGIINAQLRDGFVNNSFFNENSNNLDIIRAIICSGLFPNIA---RQRKKREFKTLSEN-T 1343
Query: 657 FLYSNSV--NARESEIPYP-WLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGS--ISQGEI 711
FL+ +S+ N + P W++F EK K F+K T + + LLLFG + +Q
Sbjct: 1344 FLHPSSIVYNLFQELNPKENWVIFEEKFKTKLTFIKTITRIPEISLLLFGSTPIFNQTST 1403
Query: 712 DGH-LKMMGGYLEFFMNPSVADMYQCIRRELDELIQ 746
+ + + G ++F++ + IR ++++ +Q
Sbjct: 1404 ENSTVSINGTQIKFYIPTLSCHLLLSIREQMEKSLQ 1439
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 1077 (384.2 bits), Expect = 5.5e-109, P = 5.5e-109
Identities = 263/738 (35%), Positives = 409/738 (55%)
Query: 70 AMSVSERVASERGEKLGESV-GYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTH 128
A V + + E G S+ GY++R+E TRLL+CTTG+LLR+L D L V+H
Sbjct: 636 ATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSH 695
Query: 129 VIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPGFT 188
VIVDEVHER + DFLLI+LK++L +R +L L+LMSAT+D+E FS+YF ++ I G +
Sbjct: 696 VIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRS 755
Query: 189 YPVRTHFLEDILDMTGYRL---TPYNQ--IDDYGQEKMWKMSKQAPRKRKSQIASAVEDT 243
YPV LEDI++ TG+ L + Y Q +++ + + SK K+ + T
Sbjct: 756 YPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGGIKKYQEYIPVQTGT 815
Query: 244 LKAAN--FNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKER-P------GAVLVFMT 294
N + +YS++T+ ++ NP I +LI +L Y+ +R P GAVL+F+
Sbjct: 816 SADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIFLP 875
Query: 295 GWDDINSLNDKLQANR-ILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
G I L D L +R + +V+ L H +++ +Q F P GVRKIVLATNIA
Sbjct: 876 GLAHIQQLYDLLSTDRRFFSERYKVIAL--HSILSTQDQAAAFTLPPQGVRKIVLATNIA 933
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRL 413
ET ITI DVVFVID G+ KE Y + S L+ +++S S V+ G C+R+
Sbjct: 934 ETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRM 993
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
Y R ++ F +Y +PEILR PL+ LCL I LG+ FLS+AL P+L + NA+ L
Sbjct: 994 YTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLL 1053
Query: 474 KIIGALDHNE-ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLA 532
+ IGA + NE +LT LGQ+LA LP+ K+GKMLI GAIF CL+PV T+ A ++ + PF
Sbjct: 1054 RKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTT 1113
Query: 533 PMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYE----YCWKNFLSAPSMK 588
P+ +KD A+ AKS + SDHL + A+ GWK A++ GY YC +NFL+ S+
Sbjct: 1114 PIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKAQQE-GGYRSEIAYCRRNFLNRTSLL 1172
Query: 589 VIDSLRKEF---LSLLKDTGLVDCDTSICNAWGRDERF-----IRAVICYGLYPGISSIV 640
++ ++ F +++ T ++ + F ++AV+ GLY + I+
Sbjct: 1173 TLEEIKVSFPETIAIQYFYRFYSIKTYYSSSASQTLSFQEIALLKAVLTAGLYDNVGKII 1232
Query: 641 QNGKSSSLKT-----MEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVS 695
KS + +E Q + + Y WL++ EK++ V+L+++T ++
Sbjct: 1233 YT-KSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTYGWLLYQEKIRYARVYLRETTLIT 1291
Query: 696 DSVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPRLN 755
+LLFGG I + L + G++ F +A +++ +R +D +++ KL NP+++
Sbjct: 1292 PFSVLLFGGDIEVQHRE-RLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENPKMS 1350
Query: 756 IHTHEDLLAAVRLLVAED 773
+ + L L+ E+
Sbjct: 1351 LENDKILQIITELIKTEN 1368
Score = 549 (198.3 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 119/293 (40%), Positives = 185/293 (63%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRG-AVCS 59
+L+ R+ LP +K +N ++ + +++VV+++GETG GK+TQVP F+LE + + G + C+
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 60 IICTQPRRISAMSVSERVASERGEKLGES-----VGYKVRLEGMKGRDTRLLFCTTGILL 114
I+CTQPRRISA+S++ RV E G + G GY++R+E TRLL+CTTG+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 115 RRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSS 174
R+L D L V+HVIVDEVHER + DFLLI+LK++L +R +L L+LMSAT+D+E FS+
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFST 741
Query: 175 YFGGATVINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQ--IDDYGQEKMWKMSKQAP 229
YF ++ I G +YPV LEDI++ TG+ L + Y Q +++ + + SK
Sbjct: 742 YFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGG 801
Query: 230 RKRKSQIASAVEDTLKAAN--FNEYSSQTRESLSCWNPDCIGFNLIEYVLCYI 280
K+ + T N + +YS++T+ ++ NP I +LI +L Y+
Sbjct: 802 IKKYQEYIPVQTGTSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTYL 854
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 893 (319.4 bits), Expect = 7.8e-109, Sum P(3) = 7.8e-109
Identities = 208/487 (42%), Positives = 294/487 (60%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILES------EITSVR 54
+++ R+ LPA+ E R+L I + VV+ISGETGCGK+TQVPQFIL++ ++ +
Sbjct: 446 IIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKE 505
Query: 55 GAV-CSIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGIL 113
IICTQPRR+SA+ V+ERVA+ER +++G+ VGY++RLE + TRL FCTTGIL
Sbjct: 506 NLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGIL 565
Query: 114 LRRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFS 173
LRRL D L VTHVIVDEVHER DFLL++LK+LL R +L+++LMSATL+A LFS
Sbjct: 566 LRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFS 625
Query: 174 SYFGGATVINIPGFTYPVRTHFLEDILDMTGYRL---TPY-NQIDDYGQEKMWK------ 223
YFGGA V++IPG T+PV+ FLEDIL+M+ + + T Y ++ QE + +
Sbjct: 626 DYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYAD 685
Query: 224 --MSKQAPRKRKSQIASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYIC 281
S +AP K+ + +T + + EYS T +S+ P I LIE VL YI
Sbjct: 686 VQASGEAPGKKIKDEKLTLAETYQ--RYAEYSKPTCKSIYLMEPMTINPELIESVLKYIV 743
Query: 282 EKE----RPGAVLVFMTGWDDINSLNDKLQANRILGDPT-RVLLLTCHGSMASSEQRLIF 336
E R G +L+F+ G+ +I S++D L N + + +L+ H +++ +Q L+F
Sbjct: 744 EGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPRAGKFILVPLHSALSGEDQALVF 803
Query: 337 DEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXX 396
+ G RKIVL+TNIAETS+TI+D VFV+DCG KE +D+ N L W+S +
Sbjct: 804 KKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAK 863
Query: 397 XXXXXXXXVQPGECYRLYPRCVYDAFAEYQ-LPEILRTPLQSLCLQIKSLRLGTIAGFLS 455
V PG C LY Y Q +PEI R PL+ + L+IK+L+ LS
Sbjct: 864 QRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLS 923
Query: 456 RALQSPE 462
L++ E
Sbjct: 924 VLLETLE 930
Score = 616 (221.9 bits), Expect = 1.2e-72, Sum P(3) = 1.2e-72
Identities = 147/399 (36%), Positives = 223/399 (55%)
Query: 225 SKQAPRKRKSQIASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKE 284
S +AP K+ + +T + + EYS T +S+ P I LIE VL YI E
Sbjct: 689 SGEAPGKKIKDEKLTLAETYQ--RYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGS 746
Query: 285 ----RPGAVLVFMTGWDDINSLNDKLQANRILGDPT-RVLLLTCHGSMASSEQRLIFDEP 339
R G +L+F+ G+ +I S++D L N + + +L+ H +++ +Q L+F +
Sbjct: 747 HDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPRAGKFILVPLHSALSGEDQALVFKKA 806
Query: 340 ESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXX 399
G RKIVL+TNIAETS+TI+D VFV+DCG KE +D+ N L W+S +
Sbjct: 807 PPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRK 866
Query: 400 XXXXXVQPGECYRLYP--RCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLS-- 455
V PG C LY R Y A+ +PEI R PL+ + L+IK+L+ LS
Sbjct: 867 GRAGRVMPGVCIHLYTSYRYQYHILAQ-PVPEIQRVPLEQIVLRIKTLQTFASRNTLSVL 925
Query: 456 -RALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCL 514
L++P +V A+ L+ +GALD ++LT LG +LA LP++ ++GK+++ GAIF CL
Sbjct: 926 LETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCL 985
Query: 515 EPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKD-AERG--L 571
+ VLTI A LS + PF++P++K+ A+ K F+ SDHL ++ A+ W D A RG
Sbjct: 986 DSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLDVARRGNYA 1045
Query: 572 AGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCD 610
A Y ++FLS +++ I L+ ++L LL G V D
Sbjct: 1046 ASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPID 1084
Score = 160 (61.4 bits), Expect = 7.8e-109, Sum P(3) = 7.8e-109
Identities = 36/117 (30%), Positives = 71/117 (60%)
Query: 649 KTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGSISQ 708
KT DG V ++ +SVN++ S P+LVF EK++ ++++++D + + ++LF GS +
Sbjct: 1156 KTRGDGYVKIHPSSVNSQVSVFQAPFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGSDFK 1215
Query: 709 GEI-DGHLKMM--GGYLEFFMNP-SVADMYQCIRRELDELIQNKLLNPRLNIHTHED 761
E+ DG + G++ + A+M QC+R E+ +L++ K+ +P LN+ H++
Sbjct: 1216 VELHDGDFLFLLESGWIILKAHDLETAEMVQCLRAEMIKLLEEKIRDPCLNLLHHKN 1272
Score = 67 (28.6 bits), Expect = 7.8e-109, Sum P(3) = 7.8e-109
Identities = 23/85 (27%), Positives = 38/85 (44%)
Query: 572 AGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDT-----SIC-----------N 615
A Y ++FLS +++ I L+ ++L LL G V D + C N
Sbjct: 1046 ASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNACDNILTLTGVEQN 1105
Query: 616 AWGRDERFIRAVICYGLYPGISSIV 640
G + R + +++C LYP I I+
Sbjct: 1106 HNGDNNRLLTSLLCAALYPNIVKIM 1130
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 1075 (383.5 bits), Expect = 9.0e-109, P = 9.0e-109
Identities = 292/866 (33%), Positives = 462/866 (53%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP + + ++ +++N+V +I GETGCGK+TQV QF+LES + + GA + + +Q
Sbjct: 378 RGELPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLESFLENSNGASFNAVVSQ 437
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDT-RLLFCTTGILLRRLLVDRNL 123
PRRISA+S++ERVA+ERGE++GE+ GY VR + R ++FCT G+LLR +++ L
Sbjct: 438 PRRISAISLAERVANERGEEVGETCGYNVRFDSATPRPYGSIMFCTVGVLLR--MMENGL 495
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG-----G 178
+G++HVI+DE+HER ++ DF+LIVL++++S +LR+VLMSAT+D +LF+++F G
Sbjct: 496 RGISHVIIDEIHERDVDTDFVLIVLREMISTYRDLRVVLMSATIDTDLFTNFFSSIPDVG 555
Query: 179 AT-VINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
T VI + G T+PV++ +LEDIL + L + D Q+K K P +
Sbjct: 556 PTPVITMHGRTFPVQSFYLEDIL----HNLQHMPEEPD--QKKRKKGGPPPPDDDEGD-- 607
Query: 238 SAVEDTLKAANFNEYSSQT-RESL----SCWNPDCIGFNLIEYVLCYICEKERPGAVLVF 292
V+D K N N + + ESL S + I F +IE +L I + GAVLVF
Sbjct: 608 EEVDD--KGRNMNILTDPSINESLKTAMSRISEKDIPFGVIEAILNDIASRGVDGAVLVF 665
Query: 293 MTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNI 352
+ GW +I +L ++L ++ G + +L H + S EQR +F+ G RKI+++TNI
Sbjct: 666 LPGWAEIMTLCNRLLEHQEFGQANKYEILPLHSQLTSQEQRKVFNH-YPGKRKIIVSTNI 724
Query: 353 AETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYR 412
AETSITI+DVV+VID KAKE Y + NN W S + V+ G +
Sbjct: 725 AETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGRVRAGYAFH 784
Query: 413 LYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEY 472
L + ++A ++ E+LR PL + L IK LRLG++ FL +ALQ P V +
Sbjct: 785 LCSKMRFEALDDHGTAEMLRIPLHQIALTIKLLRLGSVGEFLGKALQPPPYDMVVESEAV 844
Query: 473 LKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLA 532
L+ +GALD N ELT LG+ LA +P+EP + K+LILG + + + +S PF+
Sbjct: 845 LQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVASAMSFPTPFV- 903
Query: 533 PMDKKD--LAEAAKSQFSHDYSDHLALVRAFEGWKDA-ERGL--AGYEYCWKNFLSAPSM 587
P +K L+ + + +SDH+A+V +G+++A + G A E+C + LS P +
Sbjct: 904 PREKHHSRLSGTQRKFAGNKFSDHVAIVSVIQGYREAVQMGASAAEREFCERYSLSNPVL 963
Query: 588 KVIDSLRKEFLSLLKDTG------LVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ 641
K+ D R++ + +L++ L D ++ N R+ +R+++ LYP ++ V
Sbjct: 964 KMTDGARRQLIDVLRNQCSFPEDILFDISVNV-NGPDRELNLMRSLLVMALYPNVAYYV- 1021
Query: 642 NGKSSSLKTMEDGQVFL--YSNSV---NARESEIPYPWLVFNEKMKVNSVFLKDSTAVSD 696
GK L T+E + YS V N +E + P P LVF EK++ + K + +S
Sbjct: 1022 -GKRKVL-TIEQSSALINKYSMLVPMNNRQEMDFPSPLLVFTEKVRTRCISCKQMSVISA 1079
Query: 697 SVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPR--- 753
LL+FG + +G L + + MN S A +R ++ L+ NP
Sbjct: 1080 IQLLVFGSRKVECVGEG-LVRIDETITIRMNVSTAAALIGLRPCIEALLVKSCENPESLA 1138
Query: 754 -LNIHTHEDLLAAVRLLVAEDQCEGRFIFGHQVFKPSKPSVVGAQPAFISRTESGPGGDN 812
LN + +L +R + +E+ + + G P + + GP +N
Sbjct: 1139 GLN-PSDAELRQLLRDISSEEFMSEAGPIKDSLLTDNALIQKGPAPNRLEYADWGPSNNN 1197
Query: 813 SKSQLQTLLTRAGYAAPSYRTKQLKN 838
S Q Q AG YR + N
Sbjct: 1198 SSFQNQDFPPAAGGKVHPYRGNRRGN 1223
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 1027 (366.6 bits), Expect = 1.1e-105, Sum P(2) = 1.1e-105
Identities = 251/630 (39%), Positives = 358/630 (56%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M++ R LP + KN +L ++ ++ +II ETG GK+TQ+P FILE E+ S G C I
Sbjct: 638 MVQSRMQLPIWTFKNEILNTLNSHRALIICSETGSGKSTQIPSFILEHEMLS--GRPCKI 695
Query: 61 ICTQPRRISAMSVSERVASERGEK---LGES---VGYKVRLEGMKGRDTRLLFCTTGILL 114
T+PRRISA+S++ RV+ E GE +G S +G+ VRLE TRL+F TTG+++
Sbjct: 696 YVTEPRRISAISLARRVSEELGESKNDVGTSRSLIGFAVRLESKVSPATRLVFATTGVVV 755
Query: 115 RRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSS 174
R L + + +THV++DEVHER ++ DFLLIVL+ L+ +R +L+L+LMSAT+DA FS+
Sbjct: 756 RMLERPDDFQDITHVVLDEVHERSIDSDFLLIVLRRLMQKRQDLKLILMSATVDANRFST 815
Query: 175 YFGGATVINIPGFTYPVRTHFLEDILDMTGYRLTPY--NQIDDYGQEKMWKMSKQAPRKR 232
Y GG V+NIPG T+PV T FLED +++T YR T N DD ++
Sbjct: 816 YLGGVPVLNIPGRTFPVETKFLEDAIELTQYRTTENESNVADDEYEDDA----------E 865
Query: 233 KSQIASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYIC---EKERPG-A 288
SQ E T AA YS QTRE++ ++ + + LI+ +L + E E A
Sbjct: 866 TSQ----GETTGVAATLENYSKQTRETIMNFDEYRLDYQLIKKLLMKLATAPEMEYYSKA 921
Query: 289 VLVFMTGWDDINSLNDKLQANRILGDPTRV---LLLTCHGSMASSEQRLIFDEPESGVRK 345
+LVF+ G +I LND+L L +PT ++ H S+AS EQ F P G+RK
Sbjct: 922 ILVFLPGMAEIRRLNDEL-----LSEPTFQHGWIIHALHSSIASDEQEKAFVVPPDGMRK 976
Query: 346 IVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXV 405
IV+ATNIAET ITI D+ VID GK K +D S L+ ++IS + V
Sbjct: 977 IVIATNIAETGITIPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQRRGRAGRV 1036
Query: 406 QPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELL 464
Q G C+ ++ + +D AE Q PE+LR LQ L L++K +LG + L AL P
Sbjct: 1037 QRGICFHMFTKHRHDNLLAEQQTPEMLRLSLQDLVLRVKICKLGEVEPTLLEALDPPSSK 1096
Query: 465 AVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGL 524
++ AI+ LK + AL E LT LGQ LA LP++ LGK++I GA F CL+ ++I A L
Sbjct: 1097 NIRRAIDALKEVKALTSTENLTPLGQQLAKLPLDVFLGKLIIHGAFFKCLDAAISIAAIL 1156
Query: 525 SVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAER--GLAGYEYCWKNFL 582
S + PF+ M EA + F SD L + A+ WK G Y +C KNFL
Sbjct: 1157 SCKSPFVNTMGSNAQKEAVRLGFRRGDSDLLTVYNAYCAWKRTRSTPGANEYAFCRKNFL 1216
Query: 583 SAPSMKVIDSLRKEFLSLLKDTGLVDCDTS 612
S ++ I+ ++ + + + D GLV DT+
Sbjct: 1217 SPQTLLNIEDVKLQLMVSIADAGLVTLDTN 1246
Score = 41 (19.5 bits), Expect = 1.1e-105, Sum P(2) = 1.1e-105
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 626 AVIC----YGLYPGISSIVQNGKSSSLK 649
AV+C + +YPG+ SI N SL+
Sbjct: 1360 AVLCGEGDFKMYPGVLSIDTNRLRFSLR 1387
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 571 (206.1 bits), Expect = 6.3e-100, Sum P(3) = 6.3e-100
Identities = 130/330 (39%), Positives = 195/330 (59%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGV 343
++ G +L+F+ G +IN L++ L VL L H S+ + EQR +F P SG
Sbjct: 885 QKSGGILIFLPGVAEINRACGMLRSLNCL----HVLPL--HASLETKEQRKVFVPPPSGK 938
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK+V+ATN+AETSITI+D++ V+D GK KETSYDA NN L ++ S +
Sbjct: 939 RKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFASLAACKQRRGRAG 998
Query: 404 XVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
VQ GECY+LY R + AE PE+ R PL+ LCL ++++ + + GFL+RA PE
Sbjct: 999 RVQAGECYKLYTRKLESQMAERPEPEMRRVPLEQLCLSVRAMGIADVRGFLARAPTPPEA 1058
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
AV+ AI L+ +G LD EELT LG+ LA +P + + GK+++ GA+F CLE +++ A
Sbjct: 1059 AAVEGAITMLRRMGCLD-GEELTALGRQLAAIPADLRCGKLMVYGAVFGCLEDCVSVAAL 1117
Query: 524 LSV-RDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYE-----YC 577
LS R F++P DK+D A A+++F+ D L +RAF+ W R + + +C
Sbjct: 1118 LSSGRGVFVSPPDKRDQAREARARFAAGDGDLLTDLRAFQAWDAMMRDPSVQQRHVRSFC 1177
Query: 578 WKNFLSAPSMKVIDSLRKEFLSLLKDTGLV 607
NFLS ++ + S R ++ + L + GLV
Sbjct: 1178 DDNFLSYLTLSDVASARTQYFTSLVELGLV 1207
Score = 455 (165.2 bits), Expect = 6.3e-100, Sum P(3) = 6.3e-100
Identities = 97/217 (44%), Positives = 146/217 (67%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
ML R+ LPA+ ++ ++ ++++QV II+GETG GK+TQ QFIL+ G +I
Sbjct: 626 MLGQRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYGRGLGHAANI 685
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
+ TQPRRISA+ +++RV+ ER ++G+ VGY +R E G TR+ F TTG+LLRRL V
Sbjct: 686 LVTQPRRISALGLADRVSDERCSQVGQEVGYIIRGESRTGPKTRITFVTTGVLLRRLQVS 745
Query: 121 --------RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELF 172
+L V+HV++DEVHER ++ DFLL +++D+L +R +L+LVLMSATLD+ F
Sbjct: 746 GGRVEDVVASLADVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATF 805
Query: 173 SSYF--GGATV--INIPGFTYPVRTHFLEDILDMTGY 205
+SYF G V + I G T+PV ++L+D++ MT +
Sbjct: 806 ASYFVQDGIRVGQVEIAGRTFPVTDYYLDDVIRMTQF 842
Score = 92 (37.4 bits), Expect = 6.3e-100, Sum P(3) = 6.3e-100
Identities = 50/223 (22%), Positives = 103/223 (46%)
Query: 576 YCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV-DCDTSICNAW--------GRDERFI-R 625
+C NFLS ++ + S R ++ + L + GLV D N G +++ R
Sbjct: 1176 FCDDNFLSYLTLSDVASARTQYFTSLVELGLVRPGDAGYSNRGPPPSTSEGGASSKYLLR 1235
Query: 626 AVICYGLYPGISSIVQNGK--SSSL----------KTM-----EDGQVFLYSNSV--NAR 666
A+ P I+ I K ++S+ KT+ E+G+VF++ +S +++
Sbjct: 1236 ALTASAFAPQIARIQYPDKKFAASMSGAVEIDPEAKTIRYYNQENGRVFVHPSSTLFDSQ 1295
Query: 667 ESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGGYLEFFM 726
+L + + + VF++D T + LLLF G+I + G ++ G+L
Sbjct: 1296 GFSGNAAFLSYFSIISTSKVFVRDLTPFNAYTLLLFAGAIELDTL-GRGLVVDGWLRLRG 1354
Query: 727 NPSVADMYQCIRRELDELIQNKLLNPRLNIHTHEDLLAAVRLL 769
+ + +R +D++I K+ +P L++ ++ + A ++L+
Sbjct: 1355 WARIGVLVSRLRGMVDDVIALKVDDPSLDLADNDIIRAVIKLI 1397
Score = 38 (18.4 bits), Expect = 3.4e-56, Sum P(3) = 3.4e-56
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 237 ASAVED-TLKAANFNEYSSQTRESLSCWNPDCIGFN 271
++A ED T + Q R WNPD N
Sbjct: 577 SAASEDKTTLSTQIRARRKQRRPKNIVWNPDSASKN 612
Score = 38 (18.4 bits), Expect = 3.4e-56, Sum P(3) = 3.4e-56
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 209 PYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVEDTLKAAN 248
P N + ++ Q + W+ RK K + V L A N
Sbjct: 101 PVNLLSEHCQRQKWERPDYDTRKTKEGFSVFVR--LSAKN 138
>UNIPROTKB|F1RLG0 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS50088
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:CU462841
Ensembl:ENSSSCT00000015529 Uniprot:F1RLG0
Length = 1151
Score = 712 (255.7 bits), Expect = 3.5e-99, Sum P(3) = 3.5e-99
Identities = 164/414 (39%), Positives = 241/414 (58%)
Query: 241 EDTLKAANFNEYSSQTRESLSCWN----PDCIGFNLIEYVLCYICEKERPGAVLVFMTGW 296
E +L N ++ S++ RE L ++ + + +LI ++L IC GAVL+F+ G+
Sbjct: 293 ESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGY 352
Query: 297 DDINSLNDK-LQANRILGDPT--RVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
D+I L D+ L ++ D T R + H +M +S+Q+ + P +GVRKI+L+TNIA
Sbjct: 353 DEIVGLRDRILFDDKRFADNTHSRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIA 412
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRL 413
ETSIT+NDVVFVID GK KE S+DALN + L WIS S +PG C+RL
Sbjct: 413 ETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRL 472
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGT--IAGFLSRALQSPELLAVQNAIE 471
+ R + E+Q PE+LR PLQ LCL K L IA FL +A + P L V+NA++
Sbjct: 473 FSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQ 532
Query: 472 YLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFL 531
LK I A+D E+LT LG +LA LP+EP LGKM++ + CL+P+LTI L+ RDPF+
Sbjct: 533 MLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFV 592
Query: 532 APMD--KKDLAEAAKSQFSHD-YSDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPS 586
P +K A + +F+ +SDH+AL+RAF+ W+ A G+E +C KNFLS +
Sbjct: 593 LPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSD--GWERAFCEKNFLSQAT 650
Query: 587 MKVIDSLRKEFLSLLKDTGLVDC----DTSICNAWGRDERFIRAVICYGLYPGI 636
M++I +R + L L+ +G V D N + ++A + G+YP +
Sbjct: 651 MEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNL 704
Score = 278 (102.9 bits), Expect = 3.5e-99, Sum P(3) = 3.5e-99
Identities = 70/147 (47%), Positives = 85/147 (57%)
Query: 103 TRLLFCTTGILLRRLLV-DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLV 161
T L FCT G+LLR L+ D L VTHVIVDEVHER DFLL L+DLL + P L+L+
Sbjct: 6 TLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLI 65
Query: 162 LMSATLDAELFSSYFGGATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKM 221
L SA LD LF YFG VI I G + V+ FLEDIL TGY N+ +
Sbjct: 66 LSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYT----NK-----EMLK 116
Query: 222 WKMSKQAPRKRKSQIA---SAVEDTLK 245
+K KQ K++S + SA E+T K
Sbjct: 117 YKKEKQREEKQQSTLTEWYSAQENTFK 143
Score = 49 (22.3 bits), Expect = 3.5e-99, Sum P(3) = 3.5e-99
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 660 SNSVNARESEIPYPWLVFNEKMKVNSVF-LKDSTAVSDSVLLLFGG 704
+N A +P WL+++E + + + ++ +AV+ +L+F G
Sbjct: 741 ANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCG 786
Score = 39 (18.8 bits), Expect = 7.5e-19, Sum P(2) = 7.5e-19
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 823 RAGYAAPSYRTKQLKNGQFRSTVEFNGMEIMGQP 856
RAG P + +F++ +EF E++ P
Sbjct: 460 RAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMP 493
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 924 (330.3 bits), Expect = 3.8e-96, Sum P(2) = 3.8e-96
Identities = 226/643 (35%), Positives = 355/643 (55%)
Query: 4 FRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICT 63
FR LPA + ++ A++ +Q++IISG+TGCGK+TQ+P F+LE+ ++ G I T
Sbjct: 627 FRNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLEN--STKNGKAVKIYVT 684
Query: 64 QPRRISAMSVSERVASERG-----EKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLL 118
+PRRISA+S++ RV+ E G + E VGY VRL+ T L + TTG LR L
Sbjct: 685 EPRRISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTPLTPLTYVTTGTFLRLLE 744
Query: 119 VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG 178
V ++ VTH+I+DEVHER ++ D LLI + LL + P L++++MSATL+AE F YF G
Sbjct: 745 VGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATLNAEKFQLYFEG 804
Query: 179 ATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIAS 238
+ +I IPG TYPV +LEDIL G + N GQ+ + + + ++ S
Sbjct: 805 SNLITIPGKTYPVHRFYLEDILSQFGNDKSFGNAA---GQDVIEEDDYETDQQDASISNK 861
Query: 239 AVEDTLKAANFNEYSSQTRESLSCW-NPDCIGFNLIEYVLCYICEKERPG---AVLVFMT 294
+ ED + N + W N I + LI Y+L YI + P VLVF+
Sbjct: 862 SAEDAIVEMNL----------IPAWYNEKAINYGLIVYLLKYIFTEGDPKFSKCVLVFLP 911
Query: 295 GWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAE 354
G +I + ++ + + + + H +++S++Q+ +F+ P G RKIVL+TNIAE
Sbjct: 912 GISEILRVKSLIEDMPMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKGCRKIVLSTNIAE 971
Query: 355 TSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLY 414
T +TI DV VID G +E Y++ + S L +++S + VQ G CY L+
Sbjct: 972 TGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQEGICYHLF 1031
Query: 415 PRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
+ +D F YQ PEILR LQ + L++K ++G + L +AL P + A+E L
Sbjct: 1032 SKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVLGKALDPPSSTNIIRALEKL 1091
Query: 474 KIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAP 533
+GAL NE+LT LG++L+ LP++ LGK+L+LG + C++ +IVA L++ PF
Sbjct: 1092 HQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAMLTIGSPFRKS 1151
Query: 534 MDKKDLAEAAKSQFSHDY--SDHLALVRAFEGWKDAERGLAGYE---YCWKNFLSAPSMK 588
+D + A A+ F+ + SD + + A+ W++ G + + + +L+ ++
Sbjct: 1152 VDNEFSANKARLSFAKENTRSDLVLMYYAYCAWREICLSPLGPDEDSFAKEKYLNLEALS 1211
Query: 589 VIDSLRKEFLSLLKDTGLVDC-DTSICNAWGRD--ERFIRAVI 628
+ +SL+ + LS LKD L+ D C + R RF AVI
Sbjct: 1212 MTESLKIQLLSELKDMKLLGASDVDTCKSLKRSICRRF--AVI 1252
Score = 65 (27.9 bits), Expect = 3.8e-96, Sum P(2) = 3.8e-96
Identities = 36/149 (24%), Positives = 69/149 (46%)
Query: 627 VICYGLYPGISSI-VQNGKSSSLKTMEDGQVFLYSNSVNARESEIP-YP--WLVFNEKMK 682
VI LYP I + + S+L T + +V + SVN R SE+P P ++ + M
Sbjct: 1269 VIAASLYPNILRYDYEKRQWSTLSTNK--RVRILDVSVNNR-SELPNMPSKFVAYTNMMS 1325
Query: 683 VN--SVFLKDSTAVSDSVLLLFGGSISQGEID-GHLKMMGGYLEFFMNPSVADMYQCIRR 739
S ++ ++T V+ LL+ G + + G K+ + +F N V+ +RR
Sbjct: 1326 STRASEYVNETTMVTLRQLLMMCGLKVENRVSVGQAKL-DNFTVYFENVYVSASLSILRR 1384
Query: 740 ELDELIQNKLLNP--RLNIHTHEDLLAAV 766
++ + P RL +++H +++ +
Sbjct: 1385 FIETSLNEFFAEPDKRL-LNSHLEVIVNI 1412
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 734 (263.4 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
Identities = 181/529 (34%), Positives = 299/529 (56%)
Query: 247 ANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKER---PGAVLVFMTGWDDINSLN 303
A + S +++S + + + LIE +L +I + + PGA+LVF+ G +I L
Sbjct: 129 ARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLY 188
Query: 304 DKLQANRILGD--PTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITIND 361
++LQ+N + + R ++ H S++S EQ+ +F +P +GV KI+++TNIAETSITI+D
Sbjct: 189 EQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDD 248
Query: 362 VVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYD- 420
VV+VID GK KE YDA L +++S + V G C+ L+ Y+
Sbjct: 249 VVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNH 308
Query: 421 AFAEYQLPEILRTPLQSLCLQIKSLRLGT---IAGFLSRALQSPELLAVQNAIEYLKIIG 477
+ QLPEI R PL+ LCL+IK L + + + SR ++ P +++ + L+ +G
Sbjct: 309 QLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLG 368
Query: 478 ALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKK 537
AL +E LT LG +LA LP++ ++GK+++ G+IF CL+P LTI A L+ + PF++P DKK
Sbjct: 369 ALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKK 428
Query: 538 DLAEAAKSQFSHDYSDHLALVRAFEGWK-DAERGL-AGYEYCWKNFLSAPSMKVIDSLRK 595
+ A K +F+ SD+LAL++A++GW+ + G+ A Y YC +NFLS ++ + SL++
Sbjct: 429 EEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKR 488
Query: 596 EFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQ 655
+F LL D G R + + G +S +N K S
Sbjct: 489 QFTELLSDIGFAREGLRAREIEKRAQGGDGVLDATG--EEANSNAENPKLISAMLC---- 542
Query: 656 VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGS-----ISQGE 710
LY N V R + PY L+++EK+K + VF++D + VS L+LFGG + +GE
Sbjct: 543 AALYPNVVQVRHFDSPY--LLYHEKIKTSRVFIRDCSMVSVYPLVLFGGGQVNVQLQRGE 600
Query: 711 IDGHLKMMGGYLEFFM-NPSVADMYQCIRRELDELIQNKLLNPRLNIHT 758
+ + G++ F + VA++ + +R ELD+L+Q+K+ NP +++ T
Sbjct: 601 FV--VSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSIDLCT 647
Score = 210 (79.0 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
Identities = 50/108 (46%), Positives = 71/108 (65%)
Query: 142 DFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPGFTYPVRTHFLEDILD 201
DFLL+VLKD++S+RP L+++LMSATL+AELFS YF VI IPG T+PV FLED +
Sbjct: 2 DFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIA 61
Query: 202 MTGYRL---TPYNQIDDYGQEKMWKMSKQAPRKRKSQIA-SAVEDTLK 245
+T Y L +PY M ++SK+ + R+++ A VE+ L+
Sbjct: 62 VTRYVLQDGSPY-------MRSMKQISKEKLKARRNRTAFEEVEEDLR 102
Score = 42 (19.8 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
Identities = 18/61 (29%), Positives = 25/61 (40%)
Query: 36 GKTTQVPQFILESEITSVRGAVCSIICTQPRRISAMSVS-ERVASERGEKLGESVGYKVR 94
G+T V QF LE I R + P S +S E++ + R E V +R
Sbjct: 46 GRTFPVDQFFLEDAIAVTRYVLQD---GSPYMRSMKQISKEKLKARRNRTAFEEVEEDLR 102
Query: 95 L 95
L
Sbjct: 103 L 103
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 562 (202.9 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 138/392 (35%), Positives = 209/392 (53%)
Query: 283 KERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESG 342
+E G +L+F++G +I+++ + Q R ++L H +++ ++Q +FD G
Sbjct: 375 QEERGDLLLFLSGVAEISTIQEACQTYAT--HTQRWIVLPLHSTLSLAQQDKVFDIAPPG 432
Query: 343 VRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXX 402
VRK +++TNIAETS+TI+ V FV+D GK KE S+D L WIS S
Sbjct: 433 VRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRA 492
Query: 403 XXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
PG CYRLY YDAFA Y +PEI R L SL LQ+KS+ LG F + P
Sbjct: 493 GRTGPGVCYRLYSESDYDAFAPYPVPEIHRVALDSLILQMKSMGLGDPRTFTF--IDPPP 550
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
++Q A+ YL+ GALD + ELT +G+ LA LP++ +GKML+LG++FN +EPVLT+ A
Sbjct: 551 ASSIQTAVTYLREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAA 610
Query: 523 GLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKD--AERGLAGYEYCWKN 580
LSV+ PFL A+ + ++ D L+ F W A+RG ++C +
Sbjct: 611 ALSVQSPFLRSAQHNPDCSTARQPLNSNHGDPFTLMNTFNAWVQVKADRGSGSRKWCRRR 670
Query: 581 FLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSIC----NAWGRDERFIRAVICYGLYPGI 636
L + + +LR++F LL+ GL++ DT + R ERF + L
Sbjct: 671 GLEEQRLYEMVNLRRQFKELLRSHGLLEDDTGRATEPQDRARRRERFTERQKLHQLKRD- 729
Query: 637 SSIVQNGKSSSLKTMEDGQVFLYSNSVNARES 668
+ +N K L+ +E+G S+ +A ES
Sbjct: 730 HELQENTKRKVLR-LEEGLEGDASSGSDAEES 760
Score = 429 (156.1 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 86/188 (45%), Positives = 134/188 (71%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
+++LP ++ +++++ + + VV+++G+TGCGK+TQVPQ++L S I + I CTQ
Sbjct: 159 QKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLLASGINN-------IACTQ 211
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRRI+ +S+++RV+ E + G VGY++R E + T+LLF T G+LLR++ D +L
Sbjct: 212 PRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLLFLTEGLLLRQIQQDASLG 271
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+IVDEVHER ++ DFLL VL+ LLS RP+LRLVLMSAT++ +LFSSYF A V+ +
Sbjct: 272 QYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRLVLMSATINIKLFSSYFNDAPVLQV 331
Query: 185 PGFTYPVR 192
PG +P++
Sbjct: 332 PGRLFPIQ 339
Score = 41 (19.5 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 11/55 (20%), Positives = 24/55 (43%)
Query: 621 ERFIRAVICYGLYPGIS-----SIVQNGKSSSLKTMEDGQVFLYSNSVNARESEI 670
+ ++ ++C GLYP ++ + + T V ++ SV A + E+
Sbjct: 806 QALLKLLLCRGLYPQLAIPDEHNATRKDSDQVFHTRNKQGVVIHPTSVFASDPEV 860
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 502 (181.8 bits), Expect = 8.2e-91, Sum P(2) = 8.2e-91
Identities = 143/456 (31%), Positives = 238/456 (52%)
Query: 264 NPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTC 323
+PD I +LI +L + + GAV+V++ G+ D+ SL +L+++ + + ++LL
Sbjct: 439 HPD-IDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSLLARLESS-LPREQITIILL-- 494
Query: 324 HGSMASSEQRLIFDEPESGVR-KIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNT 382
H + +SEQR +F GVR KI+L+TNI +TSITI D+++VID G AK +YD+ +
Sbjct: 495 HSQVDNSEQRKVF-RTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDA 553
Query: 383 SCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQI 442
S L +WIS V G CYRLY Y +PEI+R L +CL
Sbjct: 554 SQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPEIMRRTLDEICLLT 613
Query: 443 KSLRLGT-IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKL 501
K I FL+ AL +P AV + LK++G LD +E+T LG +A LP+ ++
Sbjct: 614 KLAAPDKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQI 673
Query: 502 GKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMD--KKDLAEAAKSQFSHD-YSDHLALV 558
GK L+ CL+ ++ I A SVRDPF+ ++ KK + ++ F+ D SD LA++
Sbjct: 674 GKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFAGDGMSDSLAVI 733
Query: 559 RAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDT-----GLVDCDTSI 613
+ +E + + +R G ++C +NF+ +M++ S S L+DT + +
Sbjct: 734 KLYEEFTNLKRKDIG-DFCERNFICRNAMEMFVSAA----STLRDTVYRIFRFSEASARL 788
Query: 614 CNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSV---NARESEI 670
+++ D IR + GLYP ++ + + K+ L D V + +S ++ ++
Sbjct: 789 ASSFNNDTNMIRLALTAGLYPKLAYMDRENKNQ-LVAEGDPLVQVSRSSCLRGKKKQKDL 847
Query: 671 PYPWLVFNEKMKVNSVF--LKDSTAVSDSVLLLFGG 704
W++F EK + L+ +T VS ++ L GG
Sbjct: 848 ASEWILFVEKTRTADQISSLEHTTLVSGLMVALAGG 883
Score = 484 (175.4 bits), Expect = 8.2e-91, Sum P(2) = 8.2e-91
Identities = 98/203 (48%), Positives = 138/203 (67%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
RR+LP YK++ +L + ++QV+II G TG GK+TQ+PQ+ILE + A I+ +Q
Sbjct: 206 RRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEW--AAEHRAPVRIVVSQ 263
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN-- 122
PRRI+A+SVSER++ ERGE G +VGY +R+ +T L+ T+G LLR L +D+
Sbjct: 264 PRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLRALAMDKKSF 323
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
K TH+I+DE HER ++ DFLL+ K L + P LRLVLMSAT+D E S+YFGG TV+
Sbjct: 324 FKNTTHLIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEALSNYFGGGTVM 383
Query: 183 NIPGFTYPVRTHFLEDILDMTGY 205
++ G ++ V + LEDIL TGY
Sbjct: 384 DVEGRSFEVSIYHLEDILSKTGY 406
Score = 49 (22.3 bits), Expect = 5.5e-45, Sum P(2) = 5.5e-45
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 148 LKDLLSR----RPELRLVLMSAT---LDAELFSSYFGGATVINIPGFTYPVRTHFLEDIL 200
L+D+LS+ P + L T +EL ++Y+GG T+++ P + LE +L
Sbjct: 397 LEDILSKTGYMHPRMEKFLGKPTGKETPSELLAAYYGGNTIVH-PDIDNDLIVSLLELLL 455
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 887 (317.3 bits), Expect = 5.0e-90, Sum P(2) = 5.0e-90
Identities = 217/640 (33%), Positives = 343/640 (53%)
Query: 119 VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG 178
++ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 495 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFN 554
Query: 179 ATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIAS 238
+I + G T+PV+ +FLED + MT + P + +K+K +
Sbjct: 555 CPIIEVYGRTFPVQEYFLEDCIQMTHFVPPPKD------------------KKKKDKDDD 596
Query: 239 AVEDTLKAANF---NEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTG 295
ED N +EY ++TR S++ N F LIE +L YI PGAVLVF+ G
Sbjct: 597 GGEDDDANCNLICGDEYGAETRISMAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPG 656
Query: 296 WDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAET 355
W+ I ++ L+ N G R +L H + EQR +FD SGV KI+L+TNIAET
Sbjct: 657 WNLIYTMQKHLEMNPHFGSH-RYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAET 715
Query: 356 SITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYP 415
SITINDVV+VID K K + A NN + W S + V+PG C+ L
Sbjct: 716 SITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCS 775
Query: 416 RCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKI 475
R ++ + PE+ RTPL + L IK LRLG I FL++A++ P L AV A L+
Sbjct: 776 RARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRE 835
Query: 476 IGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMD 535
+ ALD N+ELT LG+ LA LP+EP+ GKM+I+G IF + + TI A +PF++ +
Sbjct: 836 LDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPFIS--E 893
Query: 536 KKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERG--LAGYEYCWKNFLSAPSMKVIDSL 593
K L ++ + +SDH+AL+ F+ W DA G A +C L+ ++++
Sbjct: 894 GKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEA 953
Query: 594 RKEFLSLLKDTGLVD-CD-TSICNAWGRDERF--IRAVICYGLYPGISSIVQNGKSSSLK 649
+ + +L ++G + C T + G D + +++ +G+YP ++ + + +
Sbjct: 954 KVQLKEILINSGFPEECLLTQVFTNTGPDNNLDVVISLLAFGVYP---NVCYHKEKRKIL 1010
Query: 650 TMEDGQVFLYSNSVN----ARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGS 705
T E ++ +SVN +++ + P P+ VF EK++ ++ K T V+ LLLF
Sbjct: 1011 TTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASK 1070
Query: 706 ISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELI 745
Q DG L ++ ++ ++ A +R ++ L+
Sbjct: 1071 KVQS--DGQLVLVDDWIRLQISHEAAACITALRAAMEALV 1108
Score = 619 (223.0 bits), Expect = 9.3e-58, P = 9.3e-58
Identities = 141/314 (44%), Positives = 194/314 (61%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP K ++ +L AISQN VVII G TGCGKTTQVPQFIL+ I + R A C+I
Sbjct: 378 VLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECNI 437
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRD-TRLLFCTTGILLRRLLV 119
+ TQPRRISA+SV+ERVA ERGE+ G+S GY VR E + R ++FCT G+LLR+L
Sbjct: 438 VVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 495
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGA 179
+ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 496 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 555
Query: 180 TVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASA 239
+I + G T+PV+ +FLED + MT + P K K+ +
Sbjct: 556 PIIEVYGRTFPVQEYFLEDCIQMTHFVPPP-------------KDKKKKDKDDDGGEDDD 602
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDI 299
L + EY ++TR S++ N F LIE +L YI PGAVLVF+ GW+ I
Sbjct: 603 ANCNLICGD--EYGAETRISMAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPGWNLI 660
Query: 300 NSLNDKLQANRILG 313
++ L+ N G
Sbjct: 661 YTMQKHLEMNPHFG 674
Score = 38 (18.4 bits), Expect = 5.0e-90, Sum P(2) = 5.0e-90
Identities = 12/68 (17%), Positives = 23/68 (33%)
Query: 35 CGKTTQVPQFILESEITSVRGAVCSIICTQPRRISAMSVSERVASERGEKLGESVGYKVR 94
CGK P + + + R + + + M S + + V Y VR
Sbjct: 12 CGKRKMTPSYEIRAVGNKNRQKFMCEVRVEGYNYTGMGNSTNKKDAQSNAARDFVNYLVR 71
Query: 95 LEGMKGRD 102
+ +K +
Sbjct: 72 INELKSEE 79
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 887 (317.3 bits), Expect = 5.0e-90, Sum P(2) = 5.0e-90
Identities = 217/640 (33%), Positives = 343/640 (53%)
Query: 119 VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG 178
++ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 495 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFN 554
Query: 179 ATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIAS 238
+I + G T+PV+ +FLED + MT + P + +K+K +
Sbjct: 555 CPIIEVYGRTFPVQEYFLEDCIQMTHFVPPPKD------------------KKKKDKDDD 596
Query: 239 AVEDTLKAANF---NEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTG 295
ED N +EY ++TR S++ N F LIE +L YI PGAVLVF+ G
Sbjct: 597 GGEDDDANCNLICGDEYGAETRISMAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPG 656
Query: 296 WDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAET 355
W+ I ++ L+ N G R +L H + EQR +FD SGV KI+L+TNIAET
Sbjct: 657 WNLIYTMQKHLEMNPHFGSH-RYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAET 715
Query: 356 SITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYP 415
SITINDVV+VID K K + A NN + W S + V+PG C+ L
Sbjct: 716 SITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCS 775
Query: 416 RCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKI 475
R ++ + PE+ RTPL + L IK LRLG I FL++A++ P L AV A L+
Sbjct: 776 RARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRE 835
Query: 476 IGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMD 535
+ ALD N+ELT LG+ LA LP+EP+ GKM+I+G IF + + TI A +PF++ +
Sbjct: 836 LDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPFIS--E 893
Query: 536 KKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERG--LAGYEYCWKNFLSAPSMKVIDSL 593
K L ++ + +SDH+AL+ F+ W DA G A +C L+ ++++
Sbjct: 894 GKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEA 953
Query: 594 RKEFLSLLKDTGLVD-CD-TSICNAWGRDERF--IRAVICYGLYPGISSIVQNGKSSSLK 649
+ + +L ++G + C T + G D + +++ +G+YP ++ + + +
Sbjct: 954 KVQLKEILINSGFPEECLLTQVFTNTGPDNNLDVVISLLAFGVYP---NVCYHKEKRKIL 1010
Query: 650 TMEDGQVFLYSNSVN----ARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGS 705
T E ++ +SVN +++ + P P+ VF EK++ ++ K T V+ LLLF
Sbjct: 1011 TTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASK 1070
Query: 706 ISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELI 745
Q DG L ++ ++ ++ A +R ++ L+
Sbjct: 1071 KVQS--DGQLVLVDDWIRLQISHEAAACITALRAAMEALV 1108
Score = 619 (223.0 bits), Expect = 9.3e-58, P = 9.3e-58
Identities = 141/314 (44%), Positives = 194/314 (61%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP K ++ +L AISQN VVII G TGCGKTTQVPQFIL+ I + R A C+I
Sbjct: 378 VLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECNI 437
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRD-TRLLFCTTGILLRRLLV 119
+ TQPRRISA+SV+ERVA ERGE+ G+S GY VR E + R ++FCT G+LLR+L
Sbjct: 438 VVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 495
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGA 179
+ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 496 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 555
Query: 180 TVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASA 239
+I + G T+PV+ +FLED + MT + P K K+ +
Sbjct: 556 PIIEVYGRTFPVQEYFLEDCIQMTHFVPPP-------------KDKKKKDKDDDGGEDDD 602
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDI 299
L + EY ++TR S++ N F LIE +L YI PGAVLVF+ GW+ I
Sbjct: 603 ANCNLICGD--EYGAETRISMAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPGWNLI 660
Query: 300 NSLNDKLQANRILG 313
++ L+ N G
Sbjct: 661 YTMQKHLEMNPHFG 674
Score = 38 (18.4 bits), Expect = 5.0e-90, Sum P(2) = 5.0e-90
Identities = 12/68 (17%), Positives = 23/68 (33%)
Query: 35 CGKTTQVPQFILESEITSVRGAVCSIICTQPRRISAMSVSERVASERGEKLGESVGYKVR 94
CGK P + + + R + + + M S + + V Y VR
Sbjct: 12 CGKRKMTPSYEIRAVGNKNRQKFMCEVRVEGYNYTGMGNSTNKKDAQSNAARDFVNYLVR 71
Query: 95 LEGMKGRD 102
+ +K +
Sbjct: 72 INELKSEE 79
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 528 (190.9 bits), Expect = 1.0e-89, Sum P(3) = 1.0e-89
Identities = 127/379 (33%), Positives = 205/379 (54%)
Query: 268 IGFNLIEYVLCYIC-----EKERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLT 322
+ + LI +V +I E ++ G++L+F+ G +I+S ++ N+ + + L
Sbjct: 797 LNYELIAHVTRFIDKRLTQEAKQDGSILIFLPGVLEISSTIKEI--NK--SSDNKFMALP 852
Query: 323 CHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNT 382
H + S+EQ+ IF G RK+V++TNIAETSITI D V VID GK+K +D NT
Sbjct: 853 LHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNT 912
Query: 383 SCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQI 442
+ L+ SW S V G CY LY + ++A + +PEI RT L++L L +
Sbjct: 913 TKLIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVV 972
Query: 443 KSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLG 502
KS+ + + FLS L +P+ ++ A ++L IGAL N LT LG Y++ LP +P+
Sbjct: 973 KSMGISNVNEFLSSGLDAPDKSSLDKANQFLHEIGALQENS-LTKLGNYISYLPTDPQSA 1031
Query: 503 KMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFE 562
K+LILG IF CL+ LT+ A S PF+ +++D + + +F + D +++ A+
Sbjct: 1032 KLLILGCIFGCLDICLTLAAISSTGSPFINSYEQRDKLKQIQKKFGNGQGDFISMANAYN 1091
Query: 563 GWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVD--CDTSICNAWGRD 620
+ + + +N+LS ++K I S R ++LSLL + G V+ D S CN +
Sbjct: 1092 AYMSNK----SKRFLTENYLSYTTIKDITSTRSQYLSLLVELGFVNRKLDDS-CNKNAEN 1146
Query: 621 ERFIRAVICYGLYPGISSI 639
IR +I YP ++ I
Sbjct: 1147 WPLIRGIIAGAFYPQVARI 1165
Score = 441 (160.3 bits), Expect = 1.0e-89, Sum P(3) = 1.0e-89
Identities = 88/210 (41%), Positives = 142/210 (67%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
ML R LPA+ ++ L+TAI+ QV +I+GETG GK+TQV QFI++ ++ S I
Sbjct: 566 MLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMD-DLYSKGDFTTKI 624
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
ICTQPRR+SA+S+++R++ ER +++G GY +R E +TR+ F TTG+LLR L
Sbjct: 625 ICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNTRITFATTGVLLRMLQSS 684
Query: 121 RN---LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG 177
+ LK + ++++DEVHER ++ DFLLI+LK ++ P+L+++L+SAT+ + F ++F
Sbjct: 685 KKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLSATISVDTFINFFE 744
Query: 178 GA-TVINIPGFTYPVRTHFLEDILDMTGYR 206
T ++I G TYP++ +L+ IL + Y+
Sbjct: 745 KPLTPLHIEGRTYPIQDFYLDSILAESEYK 774
Score = 58 (25.5 bits), Expect = 1.0e-89, Sum P(3) = 1.0e-89
Identities = 21/103 (20%), Positives = 45/103 (43%)
Query: 674 WLVFNEKMKVNSVFLKDSTAVSDSVLLLFGG------SISQGEIDGHLKMMGGYLEFFMN 727
++ + ++++D T S LLFGG +I+ G+ + ++ +L
Sbjct: 1269 FVAYRSSHHTTKLYVRDLTPTSTFATLLFGGDFSYDLNITLGQTSPGI-VIDNWLPIRTW 1327
Query: 728 PSVADMYQCIRRELDELIQNKLLNPRLNIHTHEDLLAAVRLLV 770
+ + +RR +D +I KL NP + ED+ + ++
Sbjct: 1328 CKNGVLIKHLRRLIDSVIDEKLSNPESPLD--EDIFKVIERII 1368
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 528 (190.9 bits), Expect = 1.0e-89, Sum P(3) = 1.0e-89
Identities = 127/379 (33%), Positives = 205/379 (54%)
Query: 268 IGFNLIEYVLCYIC-----EKERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLT 322
+ + LI +V +I E ++ G++L+F+ G +I+S ++ N+ + + L
Sbjct: 797 LNYELIAHVTRFIDKRLTQEAKQDGSILIFLPGVLEISSTIKEI--NK--SSDNKFMALP 852
Query: 323 CHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNT 382
H + S+EQ+ IF G RK+V++TNIAETSITI D V VID GK+K +D NT
Sbjct: 853 LHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNT 912
Query: 383 SCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQI 442
+ L+ SW S V G CY LY + ++A + +PEI RT L++L L +
Sbjct: 913 TKLIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVV 972
Query: 443 KSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLG 502
KS+ + + FLS L +P+ ++ A ++L IGAL N LT LG Y++ LP +P+
Sbjct: 973 KSMGISNVNEFLSSGLDAPDKSSLDKANQFLHEIGALQENS-LTKLGNYISYLPTDPQSA 1031
Query: 503 KMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFE 562
K+LILG IF CL+ LT+ A S PF+ +++D + + +F + D +++ A+
Sbjct: 1032 KLLILGCIFGCLDICLTLAAISSTGSPFINSYEQRDKLKQIQKKFGNGQGDFISMANAYN 1091
Query: 563 GWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVD--CDTSICNAWGRD 620
+ + + +N+LS ++K I S R ++LSLL + G V+ D S CN +
Sbjct: 1092 AYMSNK----SKRFLTENYLSYTTIKDITSTRSQYLSLLVELGFVNRKLDDS-CNKNAEN 1146
Query: 621 ERFIRAVICYGLYPGISSI 639
IR +I YP ++ I
Sbjct: 1147 WPLIRGIIAGAFYPQVARI 1165
Score = 441 (160.3 bits), Expect = 1.0e-89, Sum P(3) = 1.0e-89
Identities = 88/210 (41%), Positives = 142/210 (67%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
ML R LPA+ ++ L+TAI+ QV +I+GETG GK+TQV QFI++ ++ S I
Sbjct: 566 MLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMD-DLYSKGDFTTKI 624
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
ICTQPRR+SA+S+++R++ ER +++G GY +R E +TR+ F TTG+LLR L
Sbjct: 625 ICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNTRITFATTGVLLRMLQSS 684
Query: 121 RN---LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG 177
+ LK + ++++DEVHER ++ DFLLI+LK ++ P+L+++L+SAT+ + F ++F
Sbjct: 685 KKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLSATISVDTFINFFE 744
Query: 178 GA-TVINIPGFTYPVRTHFLEDILDMTGYR 206
T ++I G TYP++ +L+ IL + Y+
Sbjct: 745 KPLTPLHIEGRTYPIQDFYLDSILAESEYK 774
Score = 58 (25.5 bits), Expect = 1.0e-89, Sum P(3) = 1.0e-89
Identities = 21/103 (20%), Positives = 45/103 (43%)
Query: 674 WLVFNEKMKVNSVFLKDSTAVSDSVLLLFGG------SISQGEIDGHLKMMGGYLEFFMN 727
++ + ++++D T S LLFGG +I+ G+ + ++ +L
Sbjct: 1269 FVAYRSSHHTTKLYVRDLTPTSTFATLLFGGDFSYDLNITLGQTSPGI-VIDNWLPIRTW 1327
Query: 728 PSVADMYQCIRRELDELIQNKLLNPRLNIHTHEDLLAAVRLLV 770
+ + +RR +D +I KL NP + ED+ + ++
Sbjct: 1328 CKNGVLIKHLRRLIDSVIDEKLSNPESPLD--EDIFKVIERII 1368
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 883 (315.9 bits), Expect = 1.2e-89, Sum P(2) = 1.2e-89
Identities = 218/649 (33%), Positives = 343/649 (52%)
Query: 119 VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG 178
++ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 498 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFN 557
Query: 179 ATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIAS 238
+I + G TYPV+ +FLED + MT + P + +K+K +
Sbjct: 558 CPIIEVYGRTYPVQEYFLEDCIQMTHFVPPPKD------------------KKKKDKDDD 599
Query: 239 AVEDTLKAANF---NEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTG 295
ED N +EY +TR S+S N F LIE +L YI PGAVLVF+ G
Sbjct: 600 GGEDDDANCNLICGDEYGPETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPG 659
Query: 296 WDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAET 355
W+ I ++ L+ N G R +L H + EQR +FD GV K++L+TNIAET
Sbjct: 660 WNLIYTMQKHLEMNPHFGSH-RYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAET 718
Query: 356 SITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYP 415
SITINDVV+VID K K + A NN + W S + V+PG C+ L
Sbjct: 719 SITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCS 778
Query: 416 RCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKI 475
R ++ + PE+ RTPL + L IK LRLG I FL++A++ P L AV A L+
Sbjct: 779 RARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRE 838
Query: 476 IGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMD 535
+ ALD N+ELT LG+ LA LP+EP+ GKM+I+G IF + + TI A +PF+ +
Sbjct: 839 LDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFIN--E 896
Query: 536 KKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERG--LAGYEYCWKNFLSAPSMKVIDSL 593
K L ++ + +SDH+AL+ F+ W DA G A +C L+ ++++
Sbjct: 897 GKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEA 956
Query: 594 RKEFLSLLKDTGLV-DCD-TSICNAWGRDERF--IRAVICYGLYPGISSIVQNGKSSSLK 649
+ + +L ++G DC T + G D + +++ +G+YP ++ + + +
Sbjct: 957 KVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYP---NVCYHKEKRKIL 1013
Query: 650 TMEDGQVFLYSNSVN----ARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGS 705
T E ++ +SVN +++ + P P+ VF EK++ ++ K T V+ LLLF
Sbjct: 1014 TTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASK 1073
Query: 706 ISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPRL 754
Q DG + ++ +++ ++ A +R ++ L+ P +
Sbjct: 1074 KVQS--DGQIVLVDDWIKLQISHEAAACITGLRAAMEALVVEVTKQPAI 1120
Score = 624 (224.7 bits), Expect = 2.2e-58, P = 2.2e-58
Identities = 143/314 (45%), Positives = 193/314 (61%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP K ++ +L AISQN VVII G TGCGKTTQVPQFIL+ I + R A C+I
Sbjct: 381 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 440
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRD-TRLLFCTTGILLRRLLV 119
+ TQPRRISA+SV+ERVA ERGE+ G+S GY VR E + R ++FCT G+LLR+L
Sbjct: 441 VVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 498
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGA 179
+ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 499 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 558
Query: 180 TVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASA 239
+I + G TYPV+ +FLED + MT + P K K+ +
Sbjct: 559 PIIEVYGRTYPVQEYFLEDCIQMTHFVPPP-------------KDKKKKDKDDDGGEDDD 605
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDI 299
L + EY +TR S+S N F LIE +L YI PGAVLVF+ GW+ I
Sbjct: 606 ANCNLICGD--EYGPETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLI 663
Query: 300 NSLNDKLQANRILG 313
++ L+ N G
Sbjct: 664 YTMQKHLEMNPHFG 677
Score = 37 (18.1 bits), Expect = 1.2e-89, Sum P(2) = 1.2e-89
Identities = 12/68 (17%), Positives = 23/68 (33%)
Query: 35 CGKTTQVPQFILESEITSVRGAVCSIICTQPRRISAMSVSERVASERGEKLGESVGYKVR 94
CGK P + + + R + + + M S + + V Y VR
Sbjct: 12 CGKRKMTPSYEIRAVGNKNRQKFMCEVQVEGYNYTGMGNSTNKKDAQSNAARDFVNYLVR 71
Query: 95 LEGMKGRD 102
+ +K +
Sbjct: 72 INEIKSEE 79
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 883 (315.9 bits), Expect = 1.3e-89, Sum P(2) = 1.3e-89
Identities = 218/649 (33%), Positives = 343/649 (52%)
Query: 119 VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG 178
++ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 498 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFN 557
Query: 179 ATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIAS 238
+I + G TYPV+ +FLED + MT + P + +K+K +
Sbjct: 558 CPIIEVYGRTYPVQEYFLEDCIQMTHFVPPPKD------------------KKKKDKDDD 599
Query: 239 AVEDTLKAANF---NEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTG 295
ED N +EY +TR S+S N F LIE +L YI PGAVLVF+ G
Sbjct: 600 GGEDDDANCNLICGDEYGPETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPG 659
Query: 296 WDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAET 355
W+ I ++ L+ N G R +L H + EQR +FD GV K++L+TNIAET
Sbjct: 660 WNLIYTMQKHLEMNPHFGSH-RYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAET 718
Query: 356 SITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYP 415
SITINDVV+VID K K + A NN + W S + V+PG C+ L
Sbjct: 719 SITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCS 778
Query: 416 RCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKI 475
R ++ + PE+ RTPL + L IK LRLG I FL++A++ P L AV A L+
Sbjct: 779 RARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRE 838
Query: 476 IGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMD 535
+ ALD N+ELT LG+ LA LP+EP+ GKM+I+G IF + + TI A +PF+ +
Sbjct: 839 LDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFIN--E 896
Query: 536 KKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERG--LAGYEYCWKNFLSAPSMKVIDSL 593
K L ++ + +SDH+AL+ F+ W DA G A +C L+ ++++
Sbjct: 897 GKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEA 956
Query: 594 RKEFLSLLKDTGLV-DCD-TSICNAWGRDERF--IRAVICYGLYPGISSIVQNGKSSSLK 649
+ + +L ++G DC T + G D + +++ +G+YP ++ + + +
Sbjct: 957 KVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYP---NVCYHKEKRKIL 1013
Query: 650 TMEDGQVFLYSNSVN----ARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGS 705
T E ++ +SVN +++ + P P+ VF EK++ ++ K T V+ LLLF
Sbjct: 1014 TTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASK 1073
Query: 706 ISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPRL 754
Q DG + ++ +++ ++ A +R ++ L+ P +
Sbjct: 1074 KVQS--DGQIVLVDDWIKLQISHEAAACITGLRAAMEALVVEVTKQPAI 1120
Score = 624 (224.7 bits), Expect = 2.2e-58, P = 2.2e-58
Identities = 143/314 (45%), Positives = 193/314 (61%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP K ++ +L AISQN VVII G TGCGKTTQVPQFIL+ I + R A C+I
Sbjct: 381 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 440
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRD-TRLLFCTTGILLRRLLV 119
+ TQPRRISA+SV+ERVA ERGE+ G+S GY VR E + R ++FCT G+LLR+L
Sbjct: 441 VVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 498
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGA 179
+ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 499 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 558
Query: 180 TVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASA 239
+I + G TYPV+ +FLED + MT + P K K+ +
Sbjct: 559 PIIEVYGRTYPVQEYFLEDCIQMTHFVPPP-------------KDKKKKDKDDDGGEDDD 605
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDI 299
L + EY +TR S+S N F LIE +L YI PGAVLVF+ GW+ I
Sbjct: 606 ANCNLICGD--EYGPETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLI 663
Query: 300 NSLNDKLQANRILG 313
++ L+ N G
Sbjct: 664 YTMQKHLEMNPHFG 677
Score = 37 (18.1 bits), Expect = 1.3e-89, Sum P(2) = 1.3e-89
Identities = 12/68 (17%), Positives = 23/68 (33%)
Query: 35 CGKTTQVPQFILESEITSVRGAVCSIICTQPRRISAMSVSERVASERGEKLGESVGYKVR 94
CGK P + + + R + + + M S + + V Y VR
Sbjct: 12 CGKRKMTPSYEIRAVGNKNRQKFMCEVQVEGYNYTGMGNSTNKKDAQSNAARDFVNYLVR 71
Query: 95 LEGMKGRD 102
+ +K +
Sbjct: 72 INEIKSEE 79
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 886 (316.9 bits), Expect = 2.1e-88, P = 2.1e-88
Identities = 217/649 (33%), Positives = 344/649 (53%)
Query: 119 VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG 178
++ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 499 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFN 558
Query: 179 ATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIAS 238
+I + G TYPV+ +FLED + MT + P + +K+K +
Sbjct: 559 CPIIEVYGRTYPVQEYFLEDCIQMTHFIPPPKD------------------KKKKDKEDD 600
Query: 239 AVEDTLKAANF---NEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTG 295
ED N +EY +T+ S++ N F LIE +L YI PGAVLVF+ G
Sbjct: 601 GGEDDDANCNLICGDEYGPETKMSMAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPG 660
Query: 296 WDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAET 355
W+ I ++ L+ N G R +L H + EQR +FD +GV K++L+TNIAET
Sbjct: 661 WNLIYTMQKHLEMNPDFGSH-RYQILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAET 719
Query: 356 SITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYP 415
SITINDVV+VID K K + A NN + W S + V+PG C+ L
Sbjct: 720 SITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCS 779
Query: 416 RCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKI 475
R ++ + PE+ RTPL + L IK LRLG I FL++A++ P L AV A L+
Sbjct: 780 RARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRE 839
Query: 476 IGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMD 535
+ ALD N+ELT LG+ LA LP+EP+ GKM+I+G IF + V TI A +PF++ +
Sbjct: 840 LDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFIS--E 897
Query: 536 KKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERG--LAGYEYCWKNFLSAPSMKVIDSL 593
K L ++ + +SDH+AL+ F+ W DA G A +C L+ ++++
Sbjct: 898 GKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEA 957
Query: 594 RKEFLSLLKDTGLV-DCD-TSICNAWGRDERF--IRAVICYGLYPGISSIVQNGKSSSLK 649
+ + +L ++G DC T + G D + +++ +G+YP ++ + + +
Sbjct: 958 KVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYP---NVCYHKEKRKIL 1014
Query: 650 TMEDGQVFLYSNSVN----ARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGS 705
T E ++ +SVN +++ + P P+ VF EK++ ++ K T V+ LLLF
Sbjct: 1015 TTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASK 1074
Query: 706 ISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPRL 754
Q DG + ++ ++ ++ A +R ++ L+ P +
Sbjct: 1075 KVQS--DGQIVLVDDWIRLQISHEAAACITALRAAMEALVVEVTKQPNI 1121
Score = 621 (223.7 bits), Expect = 5.3e-58, P = 5.3e-58
Identities = 141/314 (44%), Positives = 194/314 (61%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP K ++ +L AISQN VVII G TGCGKTTQVPQFIL+ I + R A C+I
Sbjct: 382 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 441
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRD-TRLLFCTTGILLRRLLV 119
+ TQPRRISA+SV+ERVA ERGE+ G+S GY VR E + R ++FCT G+LLR+L
Sbjct: 442 VVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESVLPRPYASIMFCTVGVLLRKL-- 499
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGA 179
+ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 500 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 559
Query: 180 TVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASA 239
+I + G TYPV+ +FLED + MT + P K K+ ++
Sbjct: 560 PIIEVYGRTYPVQEYFLEDCIQMTHFIPPP-------------KDKKKKDKEDDGGEDDD 606
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDI 299
L + EY +T+ S++ N F LIE +L YI PGAVLVF+ GW+ I
Sbjct: 607 ANCNLICGD--EYGPETKMSMAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLI 664
Query: 300 NSLNDKLQANRILG 313
++ L+ N G
Sbjct: 665 YTMQKHLEMNPDFG 678
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 488 (176.8 bits), Expect = 3.9e-88, Sum P(2) = 3.9e-88
Identities = 139/432 (32%), Positives = 223/432 (51%)
Query: 283 KERPGAVLVFMTGWDDINSLNDK--LQANRILGD----PTRVLLLTCHGSMASSEQRLIF 336
+E PG +LVF+TG ++I K L+A+ ++ + P +V L +GS+ ++Q+ IF
Sbjct: 282 EEGPGDILVFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPL--YGSLPPNQQQRIF 339
Query: 337 DE-PE---SGV-RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWIS 391
+ PE SG RK+V++TNIAETS+TI+ +V+V+D G +K+ Y+ LL S IS
Sbjct: 340 EPTPEDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPIS 399
Query: 392 TVSXXXXXXXXXXVQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTI 450
S +PG+C+RLY + E PEILR+ L S L++K L + +
Sbjct: 400 KASAQQRAGRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDL 459
Query: 451 AGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAI 510
F +PE + A+E L + LD N +LT LG+ + P++P L MLI
Sbjct: 460 VHFDYMDPPAPETM--MRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPE 517
Query: 511 FNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERG 570
F C VL++ A LSV + F+ P + LA+ + QF+H DHL L+ + +K E G
Sbjct: 518 FYCSNEVLSLTALLSVPNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHAYKSGE-G 576
Query: 571 LAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLK--DTGLVDCDTSICNAWGRDERFIRAVI 628
A ++CW +FLS ++ D++RK+ ++ + L+ N + IR +
Sbjct: 577 TA--DWCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFDDKNYYVN----IRRAL 630
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFL 688
G + ++ NGK+ TM+D QV S S P W+V+NE + F+
Sbjct: 631 VSGFFMQVAKKSANGKN--YVTMKDNQVVSLHPSCGL--SVTP-EWVVYNEFVLTTKSFI 685
Query: 689 KDSTAVSDSVLL 700
++ TA+ L+
Sbjct: 686 RNVTAIRPEWLI 697
Score = 462 (167.7 bits), Expect = 3.9e-88, Sum P(2) = 3.9e-88
Identities = 88/198 (44%), Positives = 130/198 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+LE RR LP Y+++ L +NQ+++ GETG GKTTQ+PQF+L E+ + I
Sbjct: 68 ILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNT--QI 125
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RVA E LGE VGY +R E G +T L + T G+LLR + D
Sbjct: 126 ACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTD 185
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L + +I+DE HER + D L+ ++K L +RRP+L++++MSATLDA+ F YF A
Sbjct: 186 HMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAP 245
Query: 181 VINIPGFTYPVRTHFLED 198
++ +PG TYPV ++ ++
Sbjct: 246 LLAVPGRTYPVEIYYTQE 263
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 539 (194.8 bits), Expect = 8.1e-88, Sum P(2) = 8.1e-88
Identities = 129/327 (39%), Positives = 182/327 (55%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGV 343
E G +LVF++G +I ++ D QA L R ++L H +++ S+Q +FD +GV
Sbjct: 378 EERGDLLVFLSGMAEITTVLDAAQAYASLTQ--RWVVLPLHSALSVSDQDKVFDVAPAGV 435
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK +L+TNIAETS+TI+ + FV+D GK KE SYD L WIS S
Sbjct: 436 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 495
Query: 404 XVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
PG CYRLY YDAFA Y +PEI R L +L LQ+KS+ +G F ++ P
Sbjct: 496 RTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPP 553
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
+V+ AI YL+ GALD +E LT +G LA LP++ +GKMLILG++F+ EPVLTI A
Sbjct: 554 ASVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAA 613
Query: 524 LSVRDPFL-APMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKD--AERGLAGYEYCWKN 580
LSV+ PF + D A A+ D D L F W +ER ++C +
Sbjct: 614 LSVQSPFTRSAQSNLDCA-TARRPLESDQGDPFTLFNVFNAWVQVKSERSGNSRKWCRRR 672
Query: 581 FLSAPSMKVIDSLRKEFLSLLKDTGLV 607
+ + + +LR++F LL+D GL+
Sbjct: 673 GVEEHRLYEMANLRRQFKELLEDHGLL 699
Score = 419 (152.6 bits), Expect = 8.1e-88, Sum P(2) = 8.1e-88
Identities = 84/199 (42%), Positives = 131/199 (65%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP + NR+L + ++QVV+++G+TGCGK+TQVPQ++L + + V CTQ
Sbjct: 161 RAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVA-------CTQ 213
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRRI+ +S+++RV E + G VGY++R E + T+++F T G+LLR++ + +L
Sbjct: 214 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 273
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+IVDEVHER ++ DFLL VL+ LL +RP+L+++LMSAT++ LFSSYF A V+ +
Sbjct: 274 QYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPVVQV 333
Query: 185 PGFTYPVRTHFLEDILDMT 203
PG +P+ + D T
Sbjct: 334 PGRLFPITVVYQPQEADQT 352
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 217/649 (33%), Positives = 342/649 (52%)
Query: 119 VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG 178
++ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 501 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFN 560
Query: 179 ATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIAS 238
+I + G T+PV+ +FLED + MT + P + +K+K +
Sbjct: 561 CPIIEVYGRTFPVQEYFLEDCIQMTQFIPPPKD------------------KKKKDKEDD 602
Query: 239 AVEDTLKAANF---NEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTG 295
ED N +EY +T+ S+S N F LIE +L YI PGAVLVF+ G
Sbjct: 603 GGEDDDANCNLICGDEYGPETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPG 662
Query: 296 WDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAET 355
W+ I ++ L+ N G R +L H + EQR +FD GV K++L+TNIAET
Sbjct: 663 WNLIYTMQKHLENNSHFGSH-RYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAET 721
Query: 356 SITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYP 415
SITINDVV+VID K K + A NN + W S + V+PG C+ L
Sbjct: 722 SITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCS 781
Query: 416 RCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKI 475
R +D + PE+ RTPL + L IK LRLG I FL++A++ P L AV A L+
Sbjct: 782 RARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRE 841
Query: 476 IGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMD 535
+ ALD N+ELT LG+ LA LP+EP+ GKM+I+G IF + V TI A +PF++ +
Sbjct: 842 LDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFIS--E 899
Query: 536 KKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERG--LAGYEYCWKNFLSAPSMKVIDSL 593
K L ++ + +SDH+AL+ F+ W DA A +C + L+ ++++
Sbjct: 900 GKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEA 959
Query: 594 RKEFLSLLKDTGLV-DCD-TSICNAWGRDERF--IRAVICYGLYPGISSIVQNGKSSSLK 649
+ + +L ++G DC T + G D + +++ +G+YP ++ + + +
Sbjct: 960 KVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYP---NVCYHKEKRKIL 1016
Query: 650 TMEDGQVFLYSNSVN----ARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGS 705
T E ++ +SVN +++ + P P+ VF EK++ ++ K T V+ LLLF
Sbjct: 1017 TTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASK 1076
Query: 706 ISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPRL 754
Q DG + + ++ ++ A +R ++ L+ P +
Sbjct: 1077 KVQS--DGQIVFIDDWIRLQISHEAAACITALRAAMEALVVEVSKQPNI 1123
Score = 607 (218.7 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 139/314 (44%), Positives = 193/314 (61%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP K + +L AISQN VVII G TGCGKTTQVPQ+IL+ I + R A C+I
Sbjct: 384 VLQERELLPVKKFEAEILEAISQNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNI 443
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRD-TRLLFCTTGILLRRLLV 119
+ TQPRRISA++V+ERVA ERGE+ G+S GY VR E + R ++FCT G+LLR+L
Sbjct: 444 VVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 501
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGA 179
+ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 502 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNC 561
Query: 180 TVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASA 239
+I + G T+PV+ +FLED + MT + P K K+ ++
Sbjct: 562 PIIEVYGRTFPVQEYFLEDCIQMTQFIPPP-------------KDKKKKDKEDDGGEDDD 608
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDI 299
L + EY +T+ S+S N F LIE +L YI PGAVLVF+ GW+ I
Sbjct: 609 ANCNLICGD--EYGPETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLI 666
Query: 300 NSLNDKLQANRILG 313
++ L+ N G
Sbjct: 667 YTMQKHLENNSHFG 680
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 536 (193.7 bits), Expect = 3.7e-87, Sum P(2) = 3.7e-87
Identities = 125/327 (38%), Positives = 182/327 (55%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQANRILGDPT-RVLLLTCHGSMASSEQRLIFDEPESG 342
E G +LVF++G +I+++ L+A + T R ++L H +++ ++Q +FD G
Sbjct: 376 EERGDLLVFLSGMAEISAV---LEAAQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPG 432
Query: 343 VRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXX 402
VRK +L+TNIAETS+TI+ + FV+D GK KE SYD L WIS S
Sbjct: 433 VRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRA 492
Query: 403 XXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
PG C+RLY YDAFA Y +PEI R L SL LQ+KS+ +G F ++ P
Sbjct: 493 GRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTF--PFIEPPP 550
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+++ AI YL+ GALD +E LT +G LA LP++ +GKMLILG++F+ +EPVLTI A
Sbjct: 551 PASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAA 610
Query: 523 GLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKD--AERGLAGYEYCWKN 580
LSV+ PF AA+ D D L F W +ER ++C +
Sbjct: 611 ALSVQSPFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRR 670
Query: 581 FLSAPSMKVIDSLRKEFLSLLKDTGLV 607
+ + + +LR++F LL+D GL+
Sbjct: 671 GIEEHRLYEMANLRRQFKELLEDHGLL 697
Score = 416 (151.5 bits), Expect = 3.7e-87, Sum P(2) = 3.7e-87
Identities = 82/187 (43%), Positives = 127/187 (67%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP + NR+L + ++QVV+++G+TGCGK+TQVPQ++L + + V CTQ
Sbjct: 159 RAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVA-------CTQ 211
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRRI+ +S+++RV E + G VGY++R E + T+++F T G+LLR++ + +L
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 271
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+IVDEVHER ++ DFLL VL+ LL RP+L+++LMSAT++ LFSSYF A V+ +
Sbjct: 272 QYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQV 331
Query: 185 PGFTYPV 191
PG +P+
Sbjct: 332 PGRLFPI 338
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 521 (188.5 bits), Expect = 3.8e-87, Sum P(2) = 3.8e-87
Identities = 132/443 (29%), Positives = 238/443 (53%)
Query: 266 DCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKL-QANRILG-DPTRVLLLTC 323
D + +LI + ++ +E PG +L+F+TG ++I++ + L + + LG D +++L
Sbjct: 776 DYLDASLITVMQIHL--REPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 833
Query: 324 HGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTS 383
+ ++ S Q IFD +G RK+V+ATNIAETS+TI+ + +V+D G K+ Y++
Sbjct: 834 YSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMD 893
Query: 384 CLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQI 442
L+ + IS + PG+ YRLY Y D +PEI RT L + LQ+
Sbjct: 894 SLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQL 953
Query: 443 KSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLG 502
K++ + + F + +P + ++ A+E L + ALD LT LG+ +A P+EP L
Sbjct: 954 KTMGINDLLHF--DFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLS 1011
Query: 503 KMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFE 562
KMLI+ C + +LTIV+ LSV++ F P DK+ LA+ K++F+ DHL L+ +
Sbjct: 1012 KMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYN 1071
Query: 563 GWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDER 622
WK+ + A +C++NF+ ++K +RK+ L ++ D +D + +A G++
Sbjct: 1072 SWKNNKFSNA---WCYENFVQIRTLKRSQDVRKQLLGIM-DRHKLD----VVSA-GKNSV 1122
Query: 623 FIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMK 682
I+ IC G + + + +T+ D QV +Y + +A + P W++++E ++
Sbjct: 1123 RIQKAICSGFF---RNAAKKDPQEGYRTLVDSQV-VYIHPSSALFNRQP-EWVIYHELVQ 1177
Query: 683 VNSVFLKDSTAVSDSVLLLFGGS 705
++++ T + L+ F S
Sbjct: 1178 TTKEYMREVTTIDPKWLVEFAPS 1200
Score = 434 (157.8 bits), Expect = 3.8e-87, Sum P(2) = 3.8e-87
Identities = 88/198 (44%), Positives = 134/198 (67%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
++E R++LP YK ++ L+ A++ NQ++I+ GETG GKTTQ+ Q++ E T+ RG I
Sbjct: 579 LVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTA-RG---KI 634
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RVA E G +LG+ VGY +R E +T + + T G+LLR L++
Sbjct: 635 GCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLME 694
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
LK + +++DE HER ++ D L +LK + +RPEL+L++ SATLDA FS YF A
Sbjct: 695 AELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAP 754
Query: 181 VINIPGFTYPVRTHFLED 198
+ IPG T+PV + ++
Sbjct: 755 IFTIPGRTFPVEVLYTKE 772
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 531 (192.0 bits), Expect = 8.8e-87, Sum P(2) = 8.8e-87
Identities = 123/326 (37%), Positives = 179/326 (54%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGV 343
E G +LVF++G +I+++ + QA R ++L H +++ ++Q +FD GV
Sbjct: 376 EERGDLLVFLSGMAEISAVLEPAQA--YASHTQRWVVLPLHSALSVADQDKVFDVAPPGV 433
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK +L+TNIAETS+TI+ + FV+D GK KE SYD L WIS S
Sbjct: 434 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 493
Query: 404 XVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
PG C+RLY YDAFA Y +PEI R L +L LQ+KS+ +G F ++ P
Sbjct: 494 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPP 551
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
+++ AI YL+ GALD +E LT +G LA LP++ +GKMLILG++F+ EPVLTI A
Sbjct: 552 TSLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAA 611
Query: 524 LSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKD--AERGLAGYEYCWKNF 581
LSV+ PF A + D D L+ F W +ERG ++C
Sbjct: 612 LSVQTPFTRSAQSNPECAATRRPLESDQGDPFTLLNVFNTWVQVKSERGRNSRKWCRHRG 671
Query: 582 LSAPSMKVIDSLRKEFLSLLKDTGLV 607
+ + + +LR++F LL+D GL+
Sbjct: 672 IEEHRLYEMANLRRQFKELLEDHGLL 697
Score = 418 (152.2 bits), Expect = 8.8e-87, Sum P(2) = 8.8e-87
Identities = 84/188 (44%), Positives = 129/188 (68%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCS-IICT 63
R LP + + +L + ++QVV+++G+TGCGK+TQVPQ++L A CS + CT
Sbjct: 159 RAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLL--------AAGCSHVACT 210
Query: 64 QPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNL 123
QPRRI+ +S+++RV E + G VGY++R E + T+++F T G+LLR++ + +L
Sbjct: 211 QPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQMQREPSL 270
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVIN 183
+IVDEVHER ++ DFLL VL+ LL +RP+L++VLMSAT++ LFSSYFG A V+
Sbjct: 271 PQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATINISLFSSYFGNAPVVQ 330
Query: 184 IPGFTYPV 191
+PG +P+
Sbjct: 331 VPGRLFPI 338
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 525 (189.9 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 124/327 (37%), Positives = 179/327 (54%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQANRILGDPT-RVLLLTCHGSMASSEQRLIFDEPESG 342
E G +LVF++G +I+S+ L+A + T R ++L H +++ ++Q +FD G
Sbjct: 375 EERGDLLVFLSGMAEISSV---LEAAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPG 431
Query: 343 VRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXX 402
VRK +L+TNIAETS+TI+ + FV+D GK KE YD L WIS S
Sbjct: 432 VRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRA 491
Query: 403 XXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
PG C+RLY YDAFA Y +PEI R L +L LQ+KS+ +G F ++ P
Sbjct: 492 GRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPP 549
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+++ AI YL+ GALD +E LT +G LA LP++ +GKMLILG++F+ EPVLTI A
Sbjct: 550 PASLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAA 609
Query: 523 GLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKD--AERGLAGYEYCWKN 580
LSV+ PF AA+ D D L F W +ER ++C
Sbjct: 610 ALSVQSPFTRSAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRHR 669
Query: 581 FLSAPSMKVIDSLRKEFLSLLKDTGLV 607
+ + + +LR++F LL+D GL+
Sbjct: 670 GIEEHRLYEMANLRRQFKELLEDHGLL 696
Score = 423 (154.0 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 83/187 (44%), Positives = 130/187 (69%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP + NR+L + ++QVV+++G+TGCGK+TQVPQ++L + + V CTQ
Sbjct: 158 RAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVA-------CTQ 210
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRRI+ +S+++RV+ E + G VGY++R E + T+++F T G+LLR++ + +L
Sbjct: 211 PRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQREPSLP 270
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+IVDEVHER ++ DFLL VL+ LL +RP+L+++LMSAT++ LFSSYFG A V+ +
Sbjct: 271 QYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYFGTAPVVQV 330
Query: 185 PGFTYPV 191
PG +P+
Sbjct: 331 PGRLFPI 337
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 525 (189.9 bits), Expect = 1.5e-86, Sum P(2) = 1.5e-86
Identities = 124/327 (37%), Positives = 179/327 (54%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQANRILGDPT-RVLLLTCHGSMASSEQRLIFDEPESG 342
E G +LVF++G +I+S+ L+A + T R ++L H +++ ++Q +FD G
Sbjct: 380 EERGDLLVFLSGMAEISSV---LEAAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPG 436
Query: 343 VRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXX 402
VRK +L+TNIAETS+TI+ + FV+D GK KE YD L WIS S
Sbjct: 437 VRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRA 496
Query: 403 XXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
PG C+RLY YDAFA Y +PEI R L +L LQ+KS+ +G F ++ P
Sbjct: 497 GRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPP 554
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+++ AI YL+ GALD +E LT +G LA LP++ +GKMLILG++F+ EPVLTI A
Sbjct: 555 PASLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAA 614
Query: 523 GLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKD--AERGLAGYEYCWKN 580
LSV+ PF AA+ D D L F W +ER ++C
Sbjct: 615 ALSVQSPFTRSAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRHR 674
Query: 581 FLSAPSMKVIDSLRKEFLSLLKDTGLV 607
+ + + +LR++F LL+D GL+
Sbjct: 675 GIEEHRLYEMANLRRQFKELLEDHGLL 701
Score = 423 (154.0 bits), Expect = 1.5e-86, Sum P(2) = 1.5e-86
Identities = 83/187 (44%), Positives = 130/187 (69%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP + NR+L + ++QVV+++G+TGCGK+TQVPQ++L + + V CTQ
Sbjct: 163 RAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVA-------CTQ 215
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRRI+ +S+++RV+ E + G VGY++R E + T+++F T G+LLR++ + +L
Sbjct: 216 PRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQREPSLP 275
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+IVDEVHER ++ DFLL VL+ LL +RP+L+++LMSAT++ LFSSYFG A V+ +
Sbjct: 276 QYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYFGTAPVVQV 335
Query: 185 PGFTYPV 191
PG +P+
Sbjct: 336 PGRLFPI 342
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 869 (311.0 bits), Expect = 3.7e-86, P = 3.7e-86
Identities = 217/649 (33%), Positives = 342/649 (52%)
Query: 119 VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG 178
++ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 500 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFN 559
Query: 179 ATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIAS 238
+I + G T+PV+ +FLED + MT + P + +K+K +
Sbjct: 560 CPIIEVYGRTFPVQEYFLEDCIQMTQFIPPPKD------------------KKKKDKEDD 601
Query: 239 AVEDTLKAANF---NEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTG 295
ED N +EY +T+ S+S N F LIE +L YI PGAVLVF+ G
Sbjct: 602 GGEDDDANCNLICGDEYGPETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPG 661
Query: 296 WDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAET 355
W+ I ++ L+ N G R +L H + EQR +FD GV K++L+TNIAET
Sbjct: 662 WNLIYTMQKHLENNSHFGSH-RYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAET 720
Query: 356 SITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYP 415
SITINDVV+VID K K + A NN + W S + V+PG C+ L
Sbjct: 721 SITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCS 780
Query: 416 RCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKI 475
R +D + PE+ RTPL + L IK LRLG I FL++A++ P L A+ A L+
Sbjct: 781 RARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAIIEAEHTLRE 840
Query: 476 IGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMD 535
+ ALD N+ELT LG+ LA LP+EP+ GKM+I+G IF + V TI A +PF++ +
Sbjct: 841 LDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFIS--E 898
Query: 536 KKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERG--LAGYEYCWKNFLSAPSMKVIDSL 593
K L ++ + +SDH+AL+ F+ W DA A +C + L+ ++++
Sbjct: 899 GKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEA 958
Query: 594 RKEFLSLLKDTGLV-DCD-TSICNAWGRDERF--IRAVICYGLYPGISSIVQNGKSSSLK 649
+ + +L ++G DC T + G D + +++ +G+YP ++ + + +
Sbjct: 959 KVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYP---NVCYHKEKRKIL 1015
Query: 650 TMEDGQVFLYSNSVN----ARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGS 705
T E ++ +SVN +++ + P P+ VF EK++ ++ K T V+ LLLF
Sbjct: 1016 TTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASK 1075
Query: 706 ISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPRL 754
Q DG + + ++ ++ A IR ++ L+ P +
Sbjct: 1076 KVQS--DGQIVFIDDWIRLQISHEAAACIT-IRAAMEALVVEVSKQPNI 1121
Score = 602 (217.0 bits), Expect = 1.2e-55, P = 1.2e-55
Identities = 138/314 (43%), Positives = 192/314 (61%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP K + +L AIS N VVII G TGCGKTTQVPQ+IL+ I + R A C+I
Sbjct: 383 VLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNI 442
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRD-TRLLFCTTGILLRRLLV 119
+ TQPRRISA++V+ERVA ERGE+ G+S GY VR E + R ++FCT G+LLR+L
Sbjct: 443 VVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 500
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGA 179
+ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 501 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNC 560
Query: 180 TVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASA 239
+I + G T+PV+ +FLED + MT + P K K+ ++
Sbjct: 561 PIIEVYGRTFPVQEYFLEDCIQMTQFIPPP-------------KDKKKKDKEDDGGEDDD 607
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDI 299
L + EY +T+ S+S N F LIE +L YI PGAVLVF+ GW+ I
Sbjct: 608 ANCNLICGD--EYGPETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLI 665
Query: 300 NSLNDKLQANRILG 313
++ L+ N G
Sbjct: 666 YTMQKHLENNSHFG 679
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 864 (309.2 bits), Expect = 5.5e-86, P = 5.5e-86
Identities = 223/712 (31%), Positives = 359/712 (50%)
Query: 119 VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG 178
++ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R++LMSAT+D +F YF
Sbjct: 500 LESGIRGISHVIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFN 559
Query: 179 ATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIAS 238
+I + G T+PV+ ++LED + MT + P + +K K +
Sbjct: 560 CPIIEVFGRTFPVQEYYLEDCIQMTQFIPPP----------------RDKKKKDKDEEGG 603
Query: 239 AVEDT-LKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWD 297
E+T ++Y +TR S+S + LIE +L YI PGAVLVF+ GW+
Sbjct: 604 DDEETNCNLVCGDDYGPETRRSMSQLSEKETPLELIEALLKYIETLNVPGAVLVFLPGWN 663
Query: 298 DINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
I ++ L+ N G + +L H + EQR +FD G+ K++L+TNIAETSI
Sbjct: 664 LIYAMQKHLEMNPHFGSHS-YCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSI 722
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRC 417
TINDVV+VID K K + + NN + W S + V+PG C+ L +
Sbjct: 723 TINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKA 782
Query: 418 VYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIG 477
+D + PEI RTPL + L IK LRLG I FLS+A++ P L AV A L+ +
Sbjct: 783 RFDKLETHLTPEIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRELD 842
Query: 478 ALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKK 537
ALD N+ELT LG+ LA LP+EP+LGKM+I+G IF + + TI A +PF++ + +
Sbjct: 843 ALDSNDELTPLGRILAKLPIEPRLGKMMIIGCIFYVGDALCTISAATCFPEPFIS--EGR 900
Query: 538 DLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPSMKVIDSLRK 595
L ++ + +SDH+AL+ F+ W DA G E +C L+ ++++ +
Sbjct: 901 RLGYVHRNFAGNRFSDHVALLSVFQAWDDARMGGEDAETRFCEHKRLNMATLRMTWEAKV 960
Query: 596 EFLSLLKDTGLVD-C-DTSICNAWGRDERF--IRAVICYGLYPGISSIVQNGKSSSLKTM 651
+ +L + G + C + N G D + +++ +G+YP ++ + + + T
Sbjct: 961 QLKDILVNAGFPEECLMNQVFNNTGPDNNLDVVISLLAFGVYP---NVCYHKEKRKILTT 1017
Query: 652 EDGQVFLYSNSVNA----RESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGSIS 707
E ++ +SVN ++ + P P+ VF+EK++ ++ K T VS LLLF
Sbjct: 1018 EGRNALIHKSSVNCPFSNQDLKYPSPFFVFSEKIRTRAISAKGMTMVSPLQLLLFASKKV 1077
Query: 708 QGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPRLNIH---THEDLLA 764
DG + +++ M + +R L+ L+ P + +E +L
Sbjct: 1078 MS--DGEFIHLDDWIKLSMAHEESACITALRAALEALVVEVTKEPEILSQLDPVNEKMLN 1135
Query: 765 AVRLLVAEDQCEGRFIFGHQVFK--PSKPSVVGAQPAFISRTESG-PGGDNS 813
+R++ + G+ F P P + F G GG NS
Sbjct: 1136 MIRVISKPSTAGISLVMGNSRFGDGPRPPKMARFDSGFQGNRGRGYHGGYNS 1187
Score = 596 (214.9 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 132/317 (41%), Positives = 192/317 (60%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R +LP K + ++ A+ + VVII G TGCGKTTQVPQ+IL+ I + R A C+I+ TQ
Sbjct: 387 RESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQ 446
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRD-TRLLFCTTGILLRRLLVDRNL 123
PRRISA+SV+ERVA ERGE++G+S GY VR E + R +LFCT G+LLR+L + +
Sbjct: 447 PRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRKL--ESGI 504
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVIN 183
+G++HVIVDE+HER +N DFLL+VL+D++ PE+R++LMSAT+D +F YF +I
Sbjct: 505 RGISHVIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPIIE 564
Query: 184 IPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVEDT 243
+ G T+PV+ ++LED + MT + P + K K + + E
Sbjct: 565 VFGRTFPVQEYYLEDCIQMTQFIPPPRD-----------KKKKD----KDEEGGDDEETN 609
Query: 244 LKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLN 303
++Y +TR S+S + LIE +L YI PGAVLVF+ GW+ I ++
Sbjct: 610 CNLVCGDDYGPETRRSMSQLSEKETPLELIEALLKYIETLNVPGAVLVFLPGWNLIYAMQ 669
Query: 304 DKLQANRILGDPTRVLL 320
L+ N G + +L
Sbjct: 670 KHLEMNPHFGSHSYCIL 686
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 506 (183.2 bits), Expect = 8.9e-86, Sum P(3) = 8.9e-86
Identities = 110/247 (44%), Positives = 162/247 (65%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R +LPA K +++L +IS VVIISG TGCGKTTQVPQFIL+ + + ++ TQ
Sbjct: 178 RNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENNKHV--RVMVTQ 235
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRRI+A+S++ERVA ERGE +G +VGY+VRL+ + DT L +CTTG+LLR L D
Sbjct: 236 PRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCTTGVLLRMLTSDPVAS 295
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDA--ELFSSYFGGAT-- 180
G+TH+++DE+HER +N D+LLI L++ L RP+L+++LMSAT++ +LFS+YF +
Sbjct: 296 GITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSATIEGNMQLFSNYFENHSMD 355
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYR---LTPYNQIDDYGQEKMWKMSKQA-PRKRKSQI 236
VI I + V+ +L+ IL MTGY+ + +Y +E+ WK +A R+ K +
Sbjct: 356 VIRIESRAFDVKVFYLDQILAMTGYQPPESKAFFSTAEY-EEEDWKDEIEAVEREEKDKA 414
Query: 237 ASAVEDT 243
D+
Sbjct: 415 KQRAADS 421
Score = 283 (104.7 bits), Expect = 8.9e-86, Sum P(3) = 8.9e-86
Identities = 73/214 (34%), Positives = 107/214 (50%)
Query: 268 IGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKLQA-NRILGDPTRVLLLTCHGS 326
+ + L++ V+ Y+ + G +LVF+ G++DI + + L + V++L H
Sbjct: 626 VDYVLLDQVIQYLADSPVFGTILVFLPGYEDIQQMLKAIDCWKNSLKNMKNVIVLPLHSQ 685
Query: 327 MASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLL 386
M S IF RKI+LATNIAE SITI DV+FV+D GK KE S+D S L
Sbjct: 686 MTSINHGDIFKSVPKDTRKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLT 745
Query: 387 PSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLR 446
I+ + V G C RLY Y++ E Q+ E+ R + + L K
Sbjct: 746 VKPIARSNADQRSGRAGRVANGYCIRLYTEQEYNSMPETQIAEMKRAAIYDVTLHAKLFA 805
Query: 447 LGT--IAGFLSRALQSPELLAVQNAIEYLKIIGA 478
T I+ FLS A + PE ++ AI +L+ IGA
Sbjct: 806 PKTLKISEFLSLAPEPPEKESILQAITFLEQIGA 839
Score = 204 (76.9 bits), Expect = 8.9e-86, Sum P(3) = 8.9e-86
Identities = 56/192 (29%), Positives = 95/192 (49%)
Query: 484 ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPF-LAPMDKKDLAEA 542
ELT LG+ +A LP++P+L +ML+ G CL P++ +VA L+ R+P+ LA + +DL
Sbjct: 872 ELTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSEDRDLQSK 931
Query: 543 AKSQFSH-DYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLL 601
K + + D SDHL +R + ++C +FL+ +M+++ R++ L L
Sbjct: 932 MKFEMAQQDLSDHLLYIRLCNEFCSKNNSQQN-QFCRDHFLNFSTMRMVQGTRRQLLREL 990
Query: 602 KDTGLV------DCDTSIC----NAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKTM 651
L+ D T + N + + I+AVI G YP I ++T
Sbjct: 991 VRAKLINISPNRDVLTVLTDHHFNQFSQCWPMIQAVIAAGCYPFIGVSASESNLKKVQTF 1050
Query: 652 EDGQVFLYSNSV 663
D FL+ +S+
Sbjct: 1051 NDKPAFLHPSSM 1062
Score = 67 (28.6 bits), Expect = 2.1e-71, Sum P(3) = 2.1e-71
Identities = 28/98 (28%), Positives = 41/98 (41%)
Query: 624 IRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNS------VNARESE-IP-YPWL 675
I+AVI G YP I ++T D FL+ +S V +SE P ++
Sbjct: 1023 IQAVIAAGCYPFIGVSASESNLKKVQTFNDKPAFLHPSSMVKKQIVKMGKSEKSPRVEYV 1082
Query: 676 VFNEKMKV---NSVFLKDSTAVSDSVLLLFGGSISQGE 710
F E ++ S+ +K T + LLF G I E
Sbjct: 1083 AFQEMCQMPSDRSLSMKTVTVIPSMTALLFTGPIRLDE 1120
Score = 46 (21.3 bits), Expect = 1.3e-46, Sum P(3) = 1.3e-46
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 563 GWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSL 600
G++D ++ L + CWKN L ++ L + S+
Sbjct: 653 GYEDIQQMLKAID-CWKNSLKNMKNVIVLPLHSQMTSI 689
Score = 40 (19.1 bits), Expect = 5.5e-46, Sum P(3) = 5.5e-46
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 468 NAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKML 505
N+++Y+ + + + + V G L LP + +ML
Sbjct: 624 NSVDYVLLDQVIQYLADSPVFGTILVFLPGYEDIQQML 661
Score = 40 (19.1 bits), Expect = 1.1e-43, Sum P(2) = 1.1e-43
Identities = 18/71 (25%), Positives = 28/71 (39%)
Query: 630 YGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLK 689
+G IS++++ LKT + Y +N + + L F EK N +
Sbjct: 563 FGEKQRISTLLEKKFKEELKTALPDRTVYYHPQMNDVVDKTDFSKLRFGEKY--NLFYGS 620
Query: 690 DSTAVSDSVLL 700
S D VLL
Sbjct: 621 SSNNSVDYVLL 631
Score = 40 (19.1 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 22/82 (26%), Positives = 34/82 (41%)
Query: 156 PELRLVLM--SATLDAELFSSYFGGATVINIPGFTY-----PVRTHFLEDI--LDMTGYR 206
PE ++ M +A D L + F T + I F P + L+ I L+ G
Sbjct: 782 PETQIAEMKRAAIYDVTLHAKLFAPKT-LKISEFLSLAPEPPEKESILQAITFLEQIGAF 840
Query: 207 LTPYNQIDDYGQEKMWKMSKQA 228
TP D+ G E+ K ++A
Sbjct: 841 YTPIKIYDNSGNEEGLKNDEEA 862
Score = 37 (18.1 bits), Expect = 2.2e-43, Sum P(2) = 2.2e-43
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 336 FDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPS 388
F P S V+K ++ +E S + V F C + S T ++PS
Sbjct: 1056 FLHPSSMVKKQIVKMGKSEKSPRVEYVAFQEMCQMPSDRSLSM--KTVTVIPS 1106
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 520 (188.1 bits), Expect = 1.0e-85, Sum P(2) = 1.0e-85
Identities = 135/440 (30%), Positives = 228/440 (51%)
Query: 266 DCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKL-QANRILG-DPTRVLLLTC 323
D + +LI + ++ E PG +LVF+TG ++I++ + L + + LG D +++L
Sbjct: 745 DYLDASLITVMQIHLTEP--PGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 802
Query: 324 HGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTS 383
+ ++ S Q IFD G RK+V+ATNIAETS+TI+ + +V+D G K+ Y++
Sbjct: 803 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 862
Query: 384 CLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQI 442
L+ + IS PG+CYRLY Y D +PEI RT L S L +
Sbjct: 863 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 922
Query: 443 KSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLG 502
K++ + + F + +P + + A+E L +GALD LT LG+ +A P+EP L
Sbjct: 923 KAMGINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 980
Query: 503 KMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFE 562
KMLI+ C E +LTIV+ LSV++ F P DK+ LA+ K++F DHL L+ +
Sbjct: 981 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPEGDHLTLLAVYN 1040
Query: 563 GWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDER 622
WK+ + +C++NF+ A S++ +RK+ L ++ L D C G+
Sbjct: 1041 SWKNNK---FSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKL---DVVSC---GKATV 1091
Query: 623 FIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMK 682
++ IC G + + + +T+ D QV +Y + +A + P W+V++E +
Sbjct: 1092 RVQKAICSGFF---RNAAKKDPQEGYRTLIDQQV-VYIHPSSALFNRQP-EWVVYHELVL 1146
Query: 683 VNSVFLKDSTAVSDSVLLLF 702
++++ T + L+ F
Sbjct: 1147 TTKEYMREVTTIDPRWLVEF 1166
Score = 421 (153.3 bits), Expect = 1.0e-85, Sum P(2) = 1.0e-85
Identities = 87/198 (43%), Positives = 130/198 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+LE R +LP YK K +L+ A+ NQ++I+ GETG GKTTQ+ Q++ E+ T+ RG I
Sbjct: 548 ILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTT-RG---KI 603
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RV+ E G LG+ VGY +R E +T + + T G+LLR L+D
Sbjct: 604 GCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 663
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L +++DE HER ++ D L +LK + +R +++L++ SATLDA FS YF A
Sbjct: 664 PDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAP 723
Query: 181 VINIPGFTYPVRTHFLED 198
+ IPG TYPV + ++
Sbjct: 724 IFTIPGRTYPVEVLYTKE 741
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 504 (182.5 bits), Expect = 3.9e-85, Sum P(2) = 3.9e-85
Identities = 128/439 (29%), Positives = 235/439 (53%)
Query: 266 DCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKL-QANRILGDPTR-VLLLTC 323
D + +LI + ++ E PG +L+F+TG ++I++ L + + LG +++L
Sbjct: 698 DYLDASLITVMQIHLSEP--PGDILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPV 755
Query: 324 HGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTS 383
+ ++ S Q IF+ G RK+V+ATNIAETS+TI+ + +VID G +K+ ++ N
Sbjct: 756 YSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMD 815
Query: 384 CLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQI 442
L+ + IS + PG+CYRLY + + +PEI RT L + L +
Sbjct: 816 SLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTM 875
Query: 443 KSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLG 502
K++ + + F + P + + +A+E L +GALD LT LG+ +A P++P+L
Sbjct: 876 KAMGINDLLNF--DFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLS 933
Query: 503 KMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFE 562
KMLI C + +LT+VA LSV++ F P +K+ LA+ K++F DHL L+ +E
Sbjct: 934 KMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQKKAKFFQPEGDHLTLLNVYE 993
Query: 563 GWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDER 622
WK+++ +C++NF+ A S++ +RK+ ++++ D +D I +A GR+
Sbjct: 994 SWKNSK---FSNPWCFENFVQARSLRRAQDVRKQLITIM-DRYKLD----IISA-GRNYT 1044
Query: 623 FIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKM 681
I+ IC G + S + + KT+ +GQ V+++ +S + P W++++E +
Sbjct: 1045 KIQKAICSGFFANAS---KKDPNEGYKTLVEGQPVYIHPSSTLFNRN--P-DWVIYHELV 1098
Query: 682 KVNSVFLKDSTAVSDSVLL 700
++++ + L+
Sbjct: 1099 MTTKEYMREVCTIDPKWLV 1117
Score = 432 (157.1 bits), Expect = 3.9e-85, Sum P(2) = 3.9e-85
Identities = 91/196 (46%), Positives = 129/196 (65%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R +LP + + L A+S++Q++++ GETG GKTTQ+ Q++ E+ RG I C
Sbjct: 503 EQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGY-GTRG---KIGC 558
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++AMSVS+RVA E G +LG+ VGY +R E +T + F T GILLR L+D N
Sbjct: 559 TQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPN 618
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L + +I+DE HER ++ D L +LK L RRPEL++++ SATL+AE FS YF A +
Sbjct: 619 LSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQLF 678
Query: 183 NIPGFTYPVRTHFLED 198
IPG T+PV + +D
Sbjct: 679 IIPGRTFPVDIRYTKD 694
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 476 (172.6 bits), Expect = 6.6e-85, Sum P(2) = 6.6e-85
Identities = 136/432 (31%), Positives = 227/432 (52%)
Query: 276 VLCYICEKERPGAVLVFMTGWDDINSLNDKLQAN-RILGD---PTRVLLLTCHGSMASSE 331
V ++CE PG +LVF+TG ++I K+ LGD P +V+ L + ++ +
Sbjct: 271 VQIHMCEP--PGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPL--YSTLPPAM 326
Query: 332 QRLIFDE---P--ESGV--RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSC 384
Q+ IFD P E G RKIV++TNIAETS+TI+ +V+VID G AK+ Y+
Sbjct: 327 QQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVES 386
Query: 385 LLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQL-PEILRTPLQSLCLQIK 443
LL S IS S +PG+C+RLY ++ + Q PEILR+ L + L +K
Sbjct: 387 LLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 446
Query: 444 SLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGK 503
L + + F +PE L A+E L +GALD LT G+ ++ P++P++ K
Sbjct: 447 KLGIDDLVHFDFMDPPAPETL--MRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSK 504
Query: 504 MLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEG 563
MLI+ FNC +L++ A LSV + F+ P + + A+ AK++F H DHL L+ +
Sbjct: 505 MLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHA 564
Query: 564 WKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERF 623
+K +C++NF++ +MK D++R++ + ++ L C T N+ RD
Sbjct: 565 YKQNNEDP---NWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDF-NS--RDYYV 618
Query: 624 -IRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMK 682
IR + G + ++ + + G T++D QV ++ + N + + P W+++NE +
Sbjct: 619 NIRKAMLAGYFMQVAHLERTGH---YLTVKDNQV-VHLHPSNCLDHK-P-EWVIYNEYVL 672
Query: 683 VNSVFLKDSTAV 694
F++ T +
Sbjct: 673 TTRNFIRTVTDI 684
Score = 445 (161.7 bits), Expect = 6.6e-85, Sum P(2) = 6.6e-85
Identities = 89/200 (44%), Positives = 130/200 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEIT--SVRGAVC 58
+LE RR+LP + +K+ L ++ NQ +I+ GETG GKTTQ+PQF+L++ + S +G
Sbjct: 58 ILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKW 117
Query: 59 SIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLL 118
+ CTQPRR++AMSVS RVA E +GE VGY +R E T L + T G+LLR +
Sbjct: 118 LVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAM 177
Query: 119 VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG 178
D L+ +I+DE HER + D L +LK++L RP+L+LV+MSATL+AE F YF G
Sbjct: 178 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSG 237
Query: 179 ATVINIPGFTYPVRTHFLED 198
A ++ +PG +PV + ++
Sbjct: 238 APLMKVPGRLHPVEIFYTQE 257
Score = 41 (19.5 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 798 PAFISRTESGPGGDN---SKSQLQTLLTRAG--YAA-PSYRTKQLKNGQFR 842
PA + TE GP G S + +T LT G Y P + +++ N + R
Sbjct: 333 PAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIR 383
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 486 (176.1 bits), Expect = 7.9e-85, Sum P(2) = 7.9e-85
Identities = 137/432 (31%), Positives = 230/432 (53%)
Query: 276 VLCYICEKERPGAVLVFMTGWDDINSLNDKLQAN-RILGD---PTRVLLLTCHGSMASSE 331
V ++CE PG +LVF+TG ++I K+ LGD P +V+ L + ++ +
Sbjct: 267 VQIHMCEP--PGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPL--YSTLPPAM 322
Query: 332 QRLIFD---EP--ESGV--RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSC 384
Q+ IFD EP E G RKIV++TNIAETS+TI+ +V+VID G AK+ Y+
Sbjct: 323 QQKIFDPAPEPVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVES 382
Query: 385 LLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQL-PEILRTPLQSLCLQIK 443
LL S IS S +PG+C+RLY ++ + Q PEILR+ L + L +K
Sbjct: 383 LLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 442
Query: 444 SLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGK 503
L + + F +PE L A+E L +GALD + LT G+ ++ P++P++ K
Sbjct: 443 KLGIDDLVHFDFMDPPAPETL--MRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAK 500
Query: 504 MLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEG 563
MLI+ FNC +L++ A LSV + F+ P + + A+ AK++F H DHL L+ +
Sbjct: 501 MLIVSPEFNCSNEILSVSAMLSVPNCFIRPREAQKAADEAKARFGHIEGDHLTLLNVYHA 560
Query: 564 WKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERF 623
+K +C++NF++ +MK D++R++ + ++ L C T N+ RD
Sbjct: 561 FKQNNEDP---NWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCSTDF-NS--RDYYI 614
Query: 624 -IRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMK 682
IR + G + ++ + + G T++D QV ++ + N + + P W+++NE +
Sbjct: 615 NIRKAMLAGYFMQVAHLERTGH---YLTVKDNQV-VHLHPSNCLDHK-P-EWVIYNEYVL 668
Query: 683 VNSVFLKDSTAV 694
+ F++ T +
Sbjct: 669 TSRNFIRTVTDI 680
Score = 432 (157.1 bits), Expect = 7.9e-85, Sum P(2) = 7.9e-85
Identities = 88/200 (44%), Positives = 127/200 (63%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILES--EITSVRGAVC 58
+LE RR LP + +K L ++ NQ +I+ GETG GKTTQ+PQF++++ TS +
Sbjct: 54 ILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKW 113
Query: 59 SIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLL 118
+ CTQPRR++AMSVS RVA E +GE VGY +R E T L + T G+LLR +
Sbjct: 114 LVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAM 173
Query: 119 VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG 178
D L+ +I+DE HER + D L +LK++L RP+L+LV+MSATL+AE F YF G
Sbjct: 174 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSG 233
Query: 179 ATVINIPGFTYPVRTHFLED 198
A ++ +PG +PV + ++
Sbjct: 234 APLMKVPGRLHPVEIFYTQE 253
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 510 (184.6 bits), Expect = 1.8e-84, Sum P(2) = 1.8e-84
Identities = 121/327 (37%), Positives = 179/327 (54%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLLLTCHGSMASSEQRLIFDEPESG 342
E G +LVF++G +I ++ + QA+ R G R ++L H +++ + Q +FD G
Sbjct: 376 EERGDLLVFLSGLAEIGAVLEAAQAHARRSG---RWVVLPLHSTLSVAAQDKVFDVAPPG 432
Query: 343 VRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXX 402
VRK +L+TNIAETS+TI+ + FV+D GK KE SYD L WIS S
Sbjct: 433 VRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRA 492
Query: 403 XXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
PG C+RLY YDAFA Y +PEI R L +L LQ+KS+ +G F ++ P
Sbjct: 493 GRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPP 550
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+++ AI YL+ GALD +E LT +G LA LP++ +GKML+LG++ + EPVLTI A
Sbjct: 551 AASLETAILYLRDQGALDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAA 610
Query: 523 GLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKD--AERGLAGYEYCWKN 580
LSV+ PF + + A D+ D L F W ++R +C +
Sbjct: 611 ALSVQSPFTR--STRSNPKCAWRALESDHGDPFTLFNVFNNWVQVKSDRSTKSRRWCRRE 668
Query: 581 FLSAPSMKVIDSLRKEFLSLLKDTGLV 607
+ + + +LR++F LL+D GL+
Sbjct: 669 GIEEHRLYEMANLRRQFKELLEDHGLL 695
Score = 419 (152.6 bits), Expect = 1.8e-84, Sum P(2) = 1.8e-84
Identities = 82/187 (43%), Positives = 128/187 (68%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP + ++R+L + ++QVV+++G+TGCGK+TQVPQ++L + + V CTQ
Sbjct: 159 RAALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVA-------CTQ 211
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRRI+ +S+++RV E + G VGY++R E + T+++F T G+LLR + + L
Sbjct: 212 PRRIACISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRHVQREPTLP 271
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+IVDEVHER ++ DFLL VL+ LL RRP+L+++LMSAT++ LFS+YFG A V+ +
Sbjct: 272 QYRVLIVDEVHERHLHNDFLLGVLQRLLPRRPDLKVILMSATVNTSLFSAYFGQAPVVQV 331
Query: 185 PGFTYPV 191
PG +P+
Sbjct: 332 PGRLFPI 338
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 473 (171.6 bits), Expect = 2.4e-84, Sum P(2) = 2.4e-84
Identities = 127/441 (28%), Positives = 229/441 (51%)
Query: 266 DCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKL-QANRILG-DPTRVLLLTC 323
D + LI + ++ E E G +LVF+TG ++I+S L + + LG + +++L
Sbjct: 705 DYLDAALITVLQIHLTEPE--GDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPV 762
Query: 324 HGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTS 383
+ ++ S Q IFD P G RK+V+ATNIAE S+TI+ + +V+D G AK+ Y+
Sbjct: 763 YSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLE 822
Query: 384 CLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQI 442
L+ + IS S PG+CYRLY Y + +PEI R L L +
Sbjct: 823 SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTM 882
Query: 443 KSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLG 502
K++ + + F + P+ A+ +A+E L +GALD LT LG+ +A P+EP L
Sbjct: 883 KAMGINDLLSF--DFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLS 940
Query: 503 KMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFE 562
KML+ C + +LT++A + + F P +K+ A+ +++F DHL L+ +E
Sbjct: 941 KMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYE 1000
Query: 563 GWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDER 622
WK + +G +C++NF+ + S++ +RK+ LS++ D +D T+ G++
Sbjct: 1001 AWK--AKNFSG-PWCFENFIQSRSLRRAQDVRKQLLSIM-DKYKLDVVTA-----GKNFT 1051
Query: 623 FIRAVICYGLY-PGISSIVQNGKSSSLKTMEDGQ-VFLY-SNSVNARESEIPYPWLVFNE 679
IR I G + G Q G +T+ + Q V+++ S+++ R+ + W+++++
Sbjct: 1052 KIRKAITAGFFFHGARKDPQEG----YRTLVENQPVYIHPSSALFQRQPD----WVIYHD 1103
Query: 680 KMKVNSVFLKDSTAVSDSVLL 700
+ ++++ T + L+
Sbjct: 1104 LVMTTKEYMREVTVIDPKWLV 1124
Score = 458 (166.3 bits), Expect = 2.4e-84, Sum P(2) = 2.4e-84
Identities = 94/189 (49%), Positives = 129/189 (68%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R +LP YK K L+ A+ NQV+++ GETG GKTTQV Q++ E+ T+ +G I C
Sbjct: 510 EQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT-KG---KIGC 565
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++AMSV++RVA E G +LGE VGY +R E G DT + + T G+LLR +L+D N
Sbjct: 566 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDEN 625
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L + +++DE HER ++ D L +LK L+ RR +LRL++ SATLDAE FS YF +
Sbjct: 626 LSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIF 685
Query: 183 NIPGFTYPV 191
IPG T+PV
Sbjct: 686 TIPGRTFPV 694
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 448 (162.8 bits), Expect = 3.8e-84, Sum P(3) = 3.8e-84
Identities = 131/443 (29%), Positives = 232/443 (52%)
Query: 213 IDDYGQEKMWKMSKQAPRKRKSQIASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNL 272
I DY E + +S + ++ + S +D++ N ++ + R + I ++L
Sbjct: 788 ITDYFLEDI--LSDLDFKIKREKALSYDDDSVDERNNDDQYLKPRADSKFFTSGQINYDL 845
Query: 273 IEYVLCYICEKERP----GAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMA 328
+ V+ Y+ ++ + G+++VF+ G +IN + L AN+ + ++L H ++
Sbjct: 846 LCQVVEYVHKRLKAANDNGSIIVFLPGVGEINKCCNLL-ANK--SNEADFMVLPLHSALT 902
Query: 329 SSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPS 388
+Q+ +F + G RK+V++TNIAETSITI+D V ID G+AK Y+ +NT+ L+ S
Sbjct: 903 PEDQKRVFKKYH-GKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIES 961
Query: 389 WISTVSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRL 447
+IS V+ G Y+L+ + +Y+ +PEI R PL+SL L +K++ +
Sbjct: 962 FISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGI 1021
Query: 448 GTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEE-LTVLGQYLAMLP-MEPKLGKML 505
+ FLS AL +P L A+Q A L IG +D +++ LT LGQ+++++P M+ K GK+L
Sbjct: 1022 KDVKAFLSTALDAPPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLL 1081
Query: 506 ILGAIFNCLE-PVLTI-VAGLSVRDPFLAPMDKKDLAEA--AKSQFSHDYSDHLALVRAF 561
I G +F C + VL + + G+ V PF+ + ++ + K + D L +VR +
Sbjct: 1082 IYGILFGCTDISVLLVSILGIGVL-PFIGGFENREKIKKLLCKYESRGDLFAVLEIVRDY 1140
Query: 562 EGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSI--CNAWGR 619
KD+ +Y N LS + I S ++ S+LKD G + D + + R
Sbjct: 1141 FKIKDSS---IKRKYLRDNLLSYNKINEIKSSTAQYYSILKDVGFLPMDYKVGSISDLNR 1197
Query: 620 DER---FIRAVICYGLYPGISSI 639
+ER +RA++ YP I+ +
Sbjct: 1198 NERNFDILRAILTGAFYPHIARV 1220
Score = 424 (154.3 bits), Expect = 3.8e-84, Sum P(3) = 3.8e-84
Identities = 88/205 (42%), Positives = 135/205 (65%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRG--AVCSIIC 62
R LPA+K++ ++ I++N+VV+I+GETG GK+TQV QFIL+ + +G I+C
Sbjct: 601 REQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDF-LQKEKGDFGKTKIVC 659
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRRISA+ ++ERV+ ER GE VGY +R TR+ F TTG+L+R L R
Sbjct: 660 TQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGVLVRLLQNART 719
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
+ T V++DEVHER ++ D ++ ++K+LL R +++VLMSAT++ +LF +F G
Sbjct: 720 MLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFKKFFPGLATC 779
Query: 183 NIPGFTYPVRTHFLEDILDMTGYRL 207
+I G T+P+ +FLEDIL +++
Sbjct: 780 HIEGRTFPITDYFLEDILSDLDFKI 804
Score = 111 (44.1 bits), Expect = 3.8e-84, Sum P(3) = 3.8e-84
Identities = 33/116 (28%), Positives = 62/116 (53%)
Query: 645 SSSLKTMEDGQVFLYSNSVNARESEIP----YPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
S++ +ED ++ + +R+S+IP YP+++F N ++L+D T + LL
Sbjct: 1293 STNSVNLEDAKLLSEVDGPISRQSKIPTVVKYPFVLFTTSQVTNKLYLRDLTPTTTLSLL 1352
Query: 701 LFGGSISQGEIDGHLKMMGGYLEFFMNPSV----ADMYQCIRRELDELIQNKLLNP 752
LFGG+IS +I G + G ++ ++ + + +R +LDE I+ KL +P
Sbjct: 1353 LFGGAISY-DIGGTIHSPGIVVDNWLPIRTWCKNGVLIKELRTQLDEAIRKKLESP 1407
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 506 (183.2 bits), Expect = 5.4e-84, Sum P(2) = 5.4e-84
Identities = 133/424 (31%), Positives = 225/424 (53%)
Query: 284 ERPGAVLVFMTGWDDINS----LNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEP 339
E PG +LVF+TG D+IN+ L+++++ + P +++L + S+ S Q +IF+
Sbjct: 837 EHPGDILVFLTGQDEINTACEILHERMKKLESMSPPP-LIILPIYSSLPSEMQSVIFEPA 895
Query: 340 ESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXX 399
G RK +LATNIAE S+TI+ + FVID G K YD+ + L+ + IS +
Sbjct: 896 PPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRA 955
Query: 400 XXXXXVQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRAL 458
PG+CYRLY Y + +E +PEI R L S+ L +K+L + F +
Sbjct: 956 GRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHF--DFM 1013
Query: 459 QSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVL 518
SP + + +++E L +GALD N LT LG+ +A PMEP L K+L+ FNC + V+
Sbjct: 1014 DSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVV 1073
Query: 519 TIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCW 578
TIV+ LSV++ F P +K LA+ K++F D + + + WK E + Y +C
Sbjct: 1074 TIVSMLSVQNIFYRPQNKALLADKKKNKFIMPQGDLITYLNIYNKWK--ENSFSNY-WCH 1130
Query: 579 KNFLSAPSMKVIDSLRKEFLSLLKDTGL-VDCDTSICNAWGRDERFIRAVICYGLYPGIS 637
+NF+ + ++K +RK+ LS+ + V TS +A + ++ IC G + +
Sbjct: 1131 ENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDAT-KYVNICKS-ICSGYFNHVC 1188
Query: 638 SI-VQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSD 696
Q G ++ L QVF++ +S ++ + ++V++E + N +++D T +
Sbjct: 1189 KRDTQQGYTTLLTNQ---QVFIHPSSTLFNKNPL---FVVYHELVLTNKEYIRDCTIIQP 1242
Query: 697 SVLL 700
L+
Sbjct: 1243 QWLI 1246
Score = 421 (153.3 bits), Expect = 5.4e-84, Sum P(2) = 5.4e-84
Identities = 86/189 (45%), Positives = 124/189 (65%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R LP Y KN L+ AI +N V+I+ GETG GKTTQ+PQ++ E+ T +G V C
Sbjct: 626 EQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTE-KGIVG---C 681
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++AMS+++RV+ E G LG+ VGY +R + DT + + T G+LLR L D
Sbjct: 682 TQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTL 741
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L + +I+DE HER ++ D L +LKD++ +R + +L++ SATLDAE FS+YF + +
Sbjct: 742 LTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIF 801
Query: 183 NIPGFTYPV 191
IPG +PV
Sbjct: 802 TIPGKIFPV 810
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 506 (183.2 bits), Expect = 5.4e-84, Sum P(2) = 5.4e-84
Identities = 133/424 (31%), Positives = 225/424 (53%)
Query: 284 ERPGAVLVFMTGWDDINS----LNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEP 339
E PG +LVF+TG D+IN+ L+++++ + P +++L + S+ S Q +IF+
Sbjct: 837 EHPGDILVFLTGQDEINTACEILHERMKKLESMSPPP-LIILPIYSSLPSEMQSVIFEPA 895
Query: 340 ESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXX 399
G RK +LATNIAE S+TI+ + FVID G K YD+ + L+ + IS +
Sbjct: 896 PPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRA 955
Query: 400 XXXXXVQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRAL 458
PG+CYRLY Y + +E +PEI R L S+ L +K+L + F +
Sbjct: 956 GRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHF--DFM 1013
Query: 459 QSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVL 518
SP + + +++E L +GALD N LT LG+ +A PMEP L K+L+ FNC + V+
Sbjct: 1014 DSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVV 1073
Query: 519 TIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCW 578
TIV+ LSV++ F P +K LA+ K++F D + + + WK E + Y +C
Sbjct: 1074 TIVSMLSVQNIFYRPQNKALLADKKKNKFIMPQGDLITYLNIYNKWK--ENSFSNY-WCH 1130
Query: 579 KNFLSAPSMKVIDSLRKEFLSLLKDTGL-VDCDTSICNAWGRDERFIRAVICYGLYPGIS 637
+NF+ + ++K +RK+ LS+ + V TS +A + ++ IC G + +
Sbjct: 1131 ENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDAT-KYVNICKS-ICSGYFNHVC 1188
Query: 638 SI-VQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSD 696
Q G ++ L QVF++ +S ++ + ++V++E + N +++D T +
Sbjct: 1189 KRDTQQGYTTLLTNQ---QVFIHPSSTLFNKNPL---FVVYHELVLTNKEYIRDCTIIQP 1242
Query: 697 SVLL 700
L+
Sbjct: 1243 QWLI 1246
Score = 421 (153.3 bits), Expect = 5.4e-84, Sum P(2) = 5.4e-84
Identities = 86/189 (45%), Positives = 124/189 (65%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R LP Y KN L+ AI +N V+I+ GETG GKTTQ+PQ++ E+ T +G V C
Sbjct: 626 EQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTE-KGIVG---C 681
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++AMS+++RV+ E G LG+ VGY +R + DT + + T G+LLR L D
Sbjct: 682 TQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTL 741
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L + +I+DE HER ++ D L +LKD++ +R + +L++ SATLDAE FS+YF + +
Sbjct: 742 LTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIF 801
Query: 183 NIPGFTYPV 191
IPG +PV
Sbjct: 802 TIPGKIFPV 810
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 468 (169.8 bits), Expect = 1.0e-83, Sum P(2) = 1.0e-83
Identities = 131/433 (30%), Positives = 221/433 (51%)
Query: 284 ERPGAVLVFMTGWDDINSLNDK--LQANRIL--GDPTRVLLLTCHGSMASSEQRLIFDE- 338
E G +L+F+TG ++I K L+ + ++ D + + T +GS+ Q+ IF+
Sbjct: 307 EDEGDILLFLTGEEEIEDAARKISLEGDEMIREADAGPLKVYTLYGSLPPHMQQRIFEPA 366
Query: 339 --PE--SGV--RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWIST 392
P G RK++++TNIAETS+TI+ +V+V+D G +K+ Y+ LL S IS
Sbjct: 367 PPPRRPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISK 426
Query: 393 VSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGTIA 451
S +PG+C+RLY + + PEILR+ L S L++K L + +
Sbjct: 427 ASAQQRAGRAGRTRPGKCFRLYTESAFKKELIDQTYPEILRSNLSSTVLELKKLGIDDLV 486
Query: 452 GFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIF 511
F +PE L A+E L + LD + LT LG+ + P++P L MLI F
Sbjct: 487 HFDLMDPPAPETL--MRALEELNYLACLDDDGNLTPLGRLASEFPLDPALAVMLISSPEF 544
Query: 512 NCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGL 571
C +L+I A LSV F+ P ++ A+ K+ F+H DHL L+ A+ +K E
Sbjct: 545 YCSNEILSITALLSVPQIFVRPASQRKRADEMKNLFAHPDGDHLTLLNAYHAFKSPEAQE 604
Query: 572 AGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERF---IRAVI 628
++C +FLS S++ D++R + L +++ L TS D+++ IR +
Sbjct: 605 NPKQWCHDHFLSLRSLQSADNVRMQLLRIMEREELEMISTSF-----EDKKYYENIRRAL 659
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVF 687
C G + ++ GKS + T++D Q V L+ ++V A ++E W+++NE + +
Sbjct: 660 CAGFFMQVAKKENQGKSMYM-TIKDHQNVLLHPSTVLAHDAE----WVLYNEFVLTTKNY 714
Query: 688 LKDSTAVSDSVLL 700
++ TAV L+
Sbjct: 715 IRTVTAVKPEWLI 727
Score = 446 (162.1 bits), Expect = 1.0e-83, Sum P(2) = 1.0e-83
Identities = 85/195 (43%), Positives = 131/195 (67%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ RR+LP + +++ L Q+Q+++ GETG GKTTQ+PQF+L ++ + + I
Sbjct: 92 ILKTRRDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLLDDLPQTQRKM--I 149
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RVA+E LGE VGY +R E M T L + T G+LLR + D
Sbjct: 150 ACTQPRRVAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMTDGMLLREAMND 209
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L + +I+DE HER M+ D L+ +LK+++ RRP+L++++MSATLDA+ F YF A
Sbjct: 210 HELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRRPDLKIIIMSATLDAQKFQRYFNDAP 269
Query: 181 VINIPGFTYPVRTHF 195
++ +PG T+PV +
Sbjct: 270 LLAVPGRTHPVEIFY 284
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 476 (172.6 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 131/425 (30%), Positives = 224/425 (52%)
Query: 283 KERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVL-LLTC--HGSMASSEQRLIFDEP 339
+E G +LVF TG ++I + + L+ +RI G T++ L+ C + ++ S Q IF+
Sbjct: 609 REPLGDILVFFTGQEEIETAEEILK-HRIRGLGTKIRELIICPIYANLPSELQAKIFEPT 667
Query: 340 ESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXX 399
G RK+VLATNIAETS+TI+ + +V+D G +K SY+ LL + IS S
Sbjct: 668 PEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRA 727
Query: 400 XXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRAL 458
PG+CYRLY Y+ E +PE+ RT L S+ L +KSL + + F +
Sbjct: 728 GRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINF--DFM 785
Query: 459 QSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVL 518
P A+ ++E L +GAL+ ELT G+ +A P++P L KM+++ + C + ++
Sbjct: 786 DPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEII 845
Query: 519 TIVAGLSVRDP-FLAPMDKKDLAEAAKSQF-SHDYSDHLALVRAFEGWKDAERGLAGYEY 576
+I A LS+ F P DK+ A+ A+ F + + DH+AL++ + WK+ ++
Sbjct: 846 SIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFST---QW 902
Query: 577 CWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGI 636
C++N++ SMK +R + LL+ V+ D S N D +R I G +P
Sbjct: 903 CYENYIQVRSMKRARDIRDQLEGLLER---VEIDIS-SNLNELDS--VRKSIVAGFFPHT 956
Query: 637 SSIVQNGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVS 695
+ + +NG S +T++ Q V ++ NS S++ W+V++E + + +++ T +
Sbjct: 957 AKLQKNG---SYRTVKHPQTVHIHPNS---GLSQVLPRWVVYHELVLTSKEYMRQVTELK 1010
Query: 696 DSVLL 700
L+
Sbjct: 1011 PEWLI 1015
Score = 444 (161.4 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 92/193 (47%), Positives = 129/193 (66%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E RR+LP Y +++LL A+ ++QV++I G+TG GKTTQ+PQ++ E+ T RG V C
Sbjct: 399 EVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTK-RGKVG---C 454
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++AMSV+ RVA E G KLG VGY +R E T L + T G+LLR LL + +
Sbjct: 455 TQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPD 514
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L + VIVDE HER ++ D L ++KD+ RP+L+L++ SAT+DAE FS YF A +
Sbjct: 515 LASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIF 574
Query: 183 NIPGFTYPVRTHF 195
+ PG YPV ++
Sbjct: 575 SFPGRRYPVEINY 587
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 487 (176.5 bits), Expect = 3.1e-83, Sum P(2) = 3.1e-83
Identities = 133/437 (30%), Positives = 225/437 (51%)
Query: 273 IEYVLCYICEKERPGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLLLTCHGSMASSE 331
++ VL I + PG +LVFMTG +DI + + + ++L DP ++ +L + M + +
Sbjct: 384 VKQVLA-IHVSQGPGDILVFMTGQEDIEATCELVDERLKLLNDPPKLSILPIYSQMPAEQ 442
Query: 332 QRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWIS 391
Q IF+ GVRK+++ATNIAETS+T++ ++FV+D G +K Y+ L + IS
Sbjct: 443 QAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPIS 502
Query: 392 TVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQ-LPEILRTPLQSLCLQIKSLRLGTI 450
+ PG+ YRLY Y Q +PEI RT L + L +KSL + +
Sbjct: 503 QANANQRSGRAGRTGPGKAYRLYTEVAYKNEMYLQTIPEIQRTSLSNTVLLLKSLGVKDL 562
Query: 451 AGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAI 510
F + P + ++ L +GALD+ +LT LG+ + PM+P L K++I A
Sbjct: 563 LDF--DFMDPPPQETISTSLFELWSLGALDNLGDLTHLGRQMTPFPMDPPLAKLIITAAE 620
Query: 511 -FNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAER 569
+ C E +LTIV+ LSV + F P ++++ ++AA+ +F SDHL L+ + WK
Sbjct: 621 QYGCSEEMLTIVSMLSVPNVFYRPKERQEESDAAREKFFVPESDHLTLLHVYTQWKS--N 678
Query: 570 GLAGYEYCWKNFLSAPSMKVIDSLRKEF--LSLLKDTGLVDCDTSICNAWGRDERFIRAV 627
G + + +C K+FL A +++ +R + + +++ L+ C T W DE IR
Sbjct: 679 GYSDH-WCTKHFLHAKTLRRAKEVRDQLNDIMVMQKLPLISCGTD----W--DE--IRKC 729
Query: 628 ICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVF 687
IC G Y + + G+ +L+T + L+ S +P ++V++E + + +
Sbjct: 730 ICSGFYHQAARVKGIGEFINLRTSVS--MALHPTSALYGLGYVP-EYVVYHELILTSKEY 786
Query: 688 LKDSTAVSDSVLLLFGG 704
+ TAV L GG
Sbjct: 787 MSTVTAVDPHWLAELGG 803
Score = 427 (155.4 bits), Expect = 3.1e-83, Sum P(2) = 3.1e-83
Identities = 93/203 (45%), Positives = 129/203 (63%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R LPA+ + LL I NQVV++ GETG GKTTQ+ QF+ E G + C
Sbjct: 183 EQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQFLYEDGYAKF-GMIG---C 238
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++AMSV++RV+ E LG+ VGY +R E G +T + + T G+LLR LV +
Sbjct: 239 TQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNTAIKYMTDGVLLRESLVQTD 298
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L + +I+DE HER +N D L+ +LK +L+RR +L+L++ SAT++AE FS +FGGA
Sbjct: 299 LDKYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIVTSATMNAERFSRFFGGAPEF 358
Query: 183 NIPGFTYPVRTHF----LEDILD 201
IPG T+PV HF ED +D
Sbjct: 359 IIPGRTFPVDVHFSRTPCEDYVD 381
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 479 (173.7 bits), Expect = 4.8e-83, Sum P(2) = 4.8e-83
Identities = 123/421 (29%), Positives = 219/421 (52%)
Query: 287 GAVLVFMTGWDDINSLNDKLQANRI--LGDPTRVLL-LTCHGSMASSEQRLIFDEPESGV 343
G +LVF+TG D+I + + L +R+ LG R L+ + + ++ S Q IF+
Sbjct: 462 GDILVFLTGQDEIETCQEVLH-DRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNA 520
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK++LATNIAETS+TI+++++VID G AK+ ++++ L+ IS S
Sbjct: 521 RKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAG 580
Query: 404 XVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
PG+C+RLY Y + +PEI R L + L +K+L + + F L P
Sbjct: 581 RTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFLDPPP 638
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ A+E L +GAL+H+ ELT LG+ +A P++P +GKML+ + C E ++TI A
Sbjct: 639 HETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAA 698
Query: 523 GLSVRDP-FLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNF 581
LSV F P DK A+ A+ F+H + DHL+L++ + W + + ++C++NF
Sbjct: 699 MLSVNSAIFYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAETDYST---QWCYENF 755
Query: 582 LSAPSMKVIDSLRKEFLSLLK--DTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSI 639
+ SMK +R++ + L++ + +V C N +R G + ++ +
Sbjct: 756 IQYRSMKRARDVREQLVGLMQRVEIDMVSCLPETVN--------VRKAATAGYFYHVARL 807
Query: 640 VQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVL 699
+ G ++K + V ++ NS + E+P W++++E + + +++ + L
Sbjct: 808 SKGGHYKTIK--HNQTVMIHPNS--SLFEELPR-WVLYHELVFTSKEYMRQVIEIESKWL 862
Query: 700 L 700
L
Sbjct: 863 L 863
Score = 433 (157.5 bits), Expect = 4.8e-83, Sum P(2) = 4.8e-83
Identities = 90/189 (47%), Positives = 123/189 (65%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E RR+LP Y K L+ A+ ++QV+II GETG GKTTQVPQ+++E+ T + + C
Sbjct: 247 ETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIG---C 303
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++AMSV+ RVA E G KLG VGY +R E T L + T G L R L + +
Sbjct: 304 TQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPD 363
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L + +I+DE HER ++ D L ++KD+ RPEL+L++ SATLDAE FS++F A +
Sbjct: 364 LASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIF 423
Query: 183 NIPGFTYPV 191
IPG YPV
Sbjct: 424 RIPGRRYPV 432
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 481 (174.4 bits), Expect = 7.8e-83, Sum P(2) = 7.8e-83
Identities = 138/423 (32%), Positives = 218/423 (51%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQAN-RILGDP-TRVLLLTCHGSMASSEQRLIFDEPES 341
+ PG VLVF+TG ++I + + LQ R LG + +L+L + ++ S Q IF+
Sbjct: 619 QSPGDVLVFLTGQEEIEACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTPP 678
Query: 342 GVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXX 401
G RK+V+ATNIAETS+TI+ +++VID G K+ SY+A L+ + S S
Sbjct: 679 GARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGR 738
Query: 402 XXXVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQS 460
V G+C+RLY + E +PEI RT L ++ L +KSL + + F
Sbjct: 739 AGRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPP 798
Query: 461 PELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTI 520
E L + A+E L +GAL+H ELT LG+ +A LP++P L KM++ + C E VLTI
Sbjct: 799 HETLVL--ALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILASEQYKCSEEVLTI 856
Query: 521 VAGLSVRDP-FLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWK 579
A LSV + F P DK A+ A+ F DHL L+ + W E G + ++C++
Sbjct: 857 AAMLSVNNSIFYRPKDKVVHADNARMNFVVPGGDHLVLLNVYTQW--VESGYST-QWCFE 913
Query: 580 NFLSAPSMKVIDSLRKEFLSLLKDTGLVD-CDTSICNAWGRDERFIRAVICYGLYPGISS 638
NF+ SMK +R + GL+D + +C++ G D IR + G + +
Sbjct: 914 NFIQFRSMKRARDVRDQL------EGLMDRIEVELCSSNG-DSMPIRKAVTAGYFYHTAR 966
Query: 639 IVQNGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDS 697
+ + G KT++ Q V+++ NS E P W++++E + F++ +
Sbjct: 967 LSKGG----YKTVKHQQTVYVHPNSSLFEEQ--PR-WMIYHELVFTTKEFMRQVIEIESG 1019
Query: 698 VLL 700
LL
Sbjct: 1020 WLL 1022
Score = 433 (157.5 bits), Expect = 7.8e-83, Sum P(2) = 7.8e-83
Identities = 88/193 (45%), Positives = 125/193 (64%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E RR+LP + + LL AI +Q+++I GETG GKTTQ+PQ++LE T +G + I C
Sbjct: 407 EVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEEGYT--KGGM-KIGC 463
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++AMSV+ RVA E KLG VGY +R E T L + T G+LLR L + +
Sbjct: 464 TQPRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMTDGMLLREFLTEPD 523
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L + +I+DE HER ++ D L ++KD+ RP+L++++ SATLD E FSS+F A V
Sbjct: 524 LASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSSFFDDAPVF 583
Query: 183 NIPGFTYPVRTHF 195
IPG +PV ++
Sbjct: 584 RIPGRRFPVDIYY 596
Score = 37 (18.1 bits), Expect = 3.8e-41, Sum P(2) = 3.8e-41
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 223 KMSKQAPRKRKSQIASAVEDTLKAANFNE 251
K K +KR +S+ ED K+ F +
Sbjct: 123 KKRKHLRQKRDESPSSSEEDKKKSITFKD 151
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 475 (172.3 bits), Expect = 8.8e-83, Sum P(2) = 8.8e-83
Identities = 129/417 (30%), Positives = 214/417 (51%)
Query: 287 GAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLLLT-CHGSMASSEQRLIFDEPESGVR 344
G +LVF+TG ++++ + LQ R LG + L++T + ++ + Q IF+ R
Sbjct: 676 GDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNAR 735
Query: 345 KIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXX 404
K+VLATNIAETS+TI+ +++VID G K+ ++ L+ + +S S
Sbjct: 736 KVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGR 795
Query: 405 VQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
V PG+C+RL+ +D E +PEI RT L ++ L +KS+ + + F + P
Sbjct: 796 VAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNF--DFMDPPPA 853
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
+ A+E L +GAL+ +LT LG+ +A P++P+L KM+I + C E +LTI A
Sbjct: 854 QTLIAALEQLYALGALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAM 913
Query: 524 LSVRDP-FLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFL 582
LSV + F P DK A+AA+ F H DHL L+ F W+ E G A ++C++NF+
Sbjct: 914 LSVGNTIFYRPKDKAFAADAARKLFFHPQGDHLTLMNVFNQWR--ESGYA-VQWCFENFI 970
Query: 583 SAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQN 642
SMK +R + L LL + V+ + N D IR I G + + + ++
Sbjct: 971 QHRSMKRAQDVRDQ-LELLLER--VEIPL-VSNVDDTDS--IRKCIASGFFYNSAKLEKS 1024
Query: 643 GKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVL 699
G + K + Q+ + +S + P W+V++E + F++ + S L
Sbjct: 1025 GLFRTTKHNQSVQI--HPSSCLFQS---PPKWVVYHELVLTTKEFMRQIVEIQSSWL 1076
Score = 440 (159.9 bits), Expect = 8.8e-83, Sum P(2) = 8.8e-83
Identities = 91/195 (46%), Positives = 127/195 (65%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R++LP Y + +L+ A+ + QV+II GETG GKTTQ+PQ++ E+ + G I C
Sbjct: 462 EVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKT-G---KIGC 517
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++AMSV+ RVA E G KLG VGY +R E + T L + T G+L+R L +
Sbjct: 518 TQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPD 577
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L + +I+DE HER ++ D L +LKD+ RP+L+L++ SAT+DAE FS YF GA
Sbjct: 578 LASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTF 637
Query: 183 NIPGFTYPVRTHFLE 197
NIPG Y V TH+ +
Sbjct: 638 NIPGRKYEVTTHYTQ 652
Score = 44 (20.5 bits), Expect = 4.3e-41, Sum P(2) = 4.3e-41
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 13 EKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAV 57
E+NR+ +AIS+N+ + + G G +++ E +I ++ V
Sbjct: 392 EQNRMKSAISENRG-LSTANIGGGNEEY--EYVFEDQIEFIKEEV 433
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 457 (165.9 bits), Expect = 9.7e-83, Sum P(2) = 9.7e-83
Identities = 90/205 (43%), Positives = 130/205 (63%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ RR LP + +++ L NQ+++ GETG GKTTQ+PQF+L E+ + +
Sbjct: 86 ILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENT--QV 143
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RVA E KLGE VGY +R E T L + T G+LLR + D
Sbjct: 144 ACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMED 203
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L + +I+DE HER + D L+ +LK ++ RRP+L++++MSATLDAE F YF A
Sbjct: 204 HDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAP 263
Query: 181 VINIPGFTYPVRTH----FLEDILD 201
++ +PG TYPV + F D LD
Sbjct: 264 LLAVPGRTYPVELYYTPEFQRDYLD 288
Score = 449 (163.1 bits), Expect = 9.7e-83, Sum P(2) = 9.7e-83
Identities = 129/431 (29%), Positives = 224/431 (51%)
Query: 284 ERPGAVLVFMTGWDDINSLNDK--LQANRILGD----PTRVLLLTCHGSMASSEQRLIFD 337
E G +L+F+TG D+I K L+ ++++ + P V L +GS+ +Q+ IF+
Sbjct: 301 EEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPL--YGSLPPHQQQRIFE 358
Query: 338 E-PES--GV--RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWIST 392
PES G RK+V++TNIAETS+TI+ +V+V+D G +K+ Y+ LL S IS
Sbjct: 359 PAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISK 418
Query: 393 VSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGTIA 451
S +PG+C+RLY + E PEILR+ L S L++K L + +
Sbjct: 419 ASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLV 478
Query: 452 GFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIF 511
F +PE + A+E L + LD LT LG+ + P++P L MLI F
Sbjct: 479 HFDFMDPPAPETM--MRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEF 536
Query: 512 NCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGL 571
C + +LTIVA LSV + F+ P K A+ AK+ F+H DH+ L+ + +K E
Sbjct: 537 QCSQEILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYE 596
Query: 572 AG-YEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICY 630
G +++C ++L+ S+ D++R + L+ L + +T+ + + IR +
Sbjct: 597 YGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNL-ELNTTDYESPKYFDN-IRKALAS 654
Query: 631 GLYPGISSIVQNGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLK 689
G + ++ ++G + T++D Q V ++ ++V ++E W+++NE + + +++
Sbjct: 655 GFFMQVAK-KRSGAKGYI-TVKDNQDVLIHPSTVLGHDAE----WVIYNEFVLTSKNYIR 708
Query: 690 DSTAVSDSVLL 700
T+V L+
Sbjct: 709 TVTSVRPEWLI 719
Score = 37 (18.1 bits), Expect = 2.3e-39, Sum P(2) = 2.3e-39
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 811 DNSKSQLQTLLTR 823
DN +SQL+ L+ R
Sbjct: 617 DNIRSQLERLMNR 629
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 493 (178.6 bits), Expect = 1.5e-82, Sum P(2) = 1.5e-82
Identities = 135/413 (32%), Positives = 209/413 (50%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQAN-RILGDPT-RVLLLTCHGSMASSEQRLIFDEPES 341
E G +LVF+TG ++I + + L ++LG+ +++L + ++ S Q IF+
Sbjct: 546 EPAGDILVFLTGQEEIETSCEALHERMKLLGENIPELIILPVYSALPSEMQTRIFEPTPP 605
Query: 342 GVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXX 401
G RK++LATNIAETSITI+ + +V+D G K YD+ L + IS
Sbjct: 606 GSRKVILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGR 665
Query: 402 XXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQS 460
PG+CYRLY Y+ +PEI R L L +K++ + + F +
Sbjct: 666 AGRTGPGKCYRLYTEQAYEKEMIPNTIPEIQRQNLSHTILMLKAMGIHDLVNF--EFMDP 723
Query: 461 PELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTI 520
P + A+E L I+ ALD + LT LG+ +A LPMEP L K LI + C E +L+I
Sbjct: 724 PSTTTMLTALEDLYILDALDDDGNLTTLGRKMADLPMEPALAKTLIQSVEYECTEEILSI 783
Query: 521 VAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKN 580
VA LSV+ F P DK+ LA+ KS+F H DHL L+ F+ W R +C N
Sbjct: 784 VAMLSVQTIFYRPKDKQALADQRKSRFHHSLGDHLTLLNVFQSWC---RNNYSKTWCRDN 840
Query: 581 FLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIV 640
F+ SM+ +RK+ S+++ G T C G D +R C G + S+
Sbjct: 841 FIQERSMRRAMEVRKQLKSIMQRFGY---KTMSC---GNDVDRVRRTFCSGYFKN-SAKR 893
Query: 641 QNGKSSSLKTM-EDGQVFLY-SNSVNARESE-IPYPWLVFNEKMKVNSVFLKD 690
Q G+ KT+ E+ V+L+ S+S+ ++ + + Y L+ K ++ V + D
Sbjct: 894 QEGEG--YKTLNENTLVYLHPSSSLYGKKPQYVIYHTLLLTSKEYMHCVSIID 944
Score = 416 (151.5 bits), Expect = 1.5e-82, Sum P(2) = 1.5e-82
Identities = 85/189 (44%), Positives = 121/189 (64%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E RR LP Y +++LL AI NQ V+I GETG GKTTQ+ Q+I E + V G I C
Sbjct: 331 EQRRMLPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGMNKVGGQTKLIGC 390
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++A SV++RV+ E G KLG++VGY +R E + +T + + T G+L R L D N
Sbjct: 391 TQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLEREALNDPN 450
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
+ + +++DE HER + D L +LK+ + P L++++ SATLD+ FS YF +I
Sbjct: 451 MNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFNNCPII 510
Query: 183 NIPGFTYPV 191
IPG T+PV
Sbjct: 511 TIPGRTFPV 519
Score = 45 (20.9 bits), Expect = 1.7e-43, Sum P(2) = 1.7e-43
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 215 DYGQEKMWKMSKQAPRKRK--SQIASAVEDTLKAANFNEYSSQTRESLSCW 263
D+ +EK +K KQ ++ K S+++ + T + ++ T +S W
Sbjct: 263 DFKEEK-FKQKKQREKEEKMQSELSDPLFQTSEPVKNSDLDPDTESFISKW 312
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 480 (174.0 bits), Expect = 2.6e-82, Sum P(2) = 2.6e-82
Identities = 138/422 (32%), Positives = 216/422 (51%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLL-LTCHGSMASSEQRLIFDEPESGV 343
PG +LVF+TG ++I + + LQ R LG R LL L + ++ S Q IF G
Sbjct: 611 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 670
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK+V+ATNIAETS+TI +++V+D G K+ SY+ L + S S
Sbjct: 671 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 730
Query: 404 XVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V G+C+RLY Y E +PEI RT L ++ L +KSL + + F L P
Sbjct: 731 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF--DFLDPPP 788
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ A+E L +GAL+H ELT G+ +A LP++P L KM++ ++C E +LT+ A
Sbjct: 789 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 848
Query: 523 GLSVRDP-FLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNF 581
LSV + F P DK A+ A+ F DHL L+ + W AE G + ++C++NF
Sbjct: 849 MLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQW--AESGYSS-QWCYENF 905
Query: 582 LSAPSMKVIDSLRKEFLSLLK--DTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSI 639
+ SM+ +R++ LL+ + GL C G R +R I G + + +
Sbjct: 906 VQFRSMRRARDVREQLEGLLERVEVGLTSCQ-------GDYVR-VRKAITSGYFYHTARL 957
Query: 640 VQNGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSV 698
++G +T++ Q VF++ NS + E + P WL+++E + F++ + S
Sbjct: 958 TRSG----YRTVKQQQTVFIHPNS-SLFEQQ-PR-WLLYHELVLTTKEFMRQVLEIESSW 1010
Query: 699 LL 700
LL
Sbjct: 1011 LL 1012
Score = 429 (156.1 bits), Expect = 2.6e-82, Sum P(2) = 2.6e-82
Identities = 90/187 (48%), Positives = 122/187 (65%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
RR+LP + + LLTAI+ +QV+II GETG GKTTQ+PQ++ E T +G I CTQ
Sbjct: 399 RRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTK-KGM--KIACTQ 455
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++AMSV+ RVA E G KLG VGY +R E T L + T G+LLR L + +L
Sbjct: 456 PRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLA 515
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+ V+VDE HER ++ D L ++KD+ RPEL++++ SATLD FS++F A V I
Sbjct: 516 SYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSAFFDDAPVFRI 575
Query: 185 PGFTYPV 191
PG +PV
Sbjct: 576 PGRRFPV 582
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 481 (174.4 bits), Expect = 6.5e-82, Sum P(2) = 6.5e-82
Identities = 137/420 (32%), Positives = 213/420 (50%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLL-LTCHGSMASSEQRLIFDEPESGV 343
PG +LVF+TG ++I + + LQ R LG R LL L + ++ S Q IF G
Sbjct: 609 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 668
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK+V+ATNIAETS+TI +++V+D G K+ SY+ L + S S
Sbjct: 669 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 728
Query: 404 XVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V G+C+RLY Y E +PEI RT L ++ L +KSL + + F L P
Sbjct: 729 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF--DFLDPPP 786
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ A+E L +GAL+H ELT G+ +A LP++P L KM++ ++C E +LT+ A
Sbjct: 787 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 846
Query: 523 GLSVRDP-FLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNF 581
LSV + F P DK A+ A+ F DHL L+ + W AE G + ++C++NF
Sbjct: 847 MLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQW--AESGYSS-QWCYENF 903
Query: 582 LSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ 641
+ SM+ +R++ LL+ V+ S C D +R I G + + + +
Sbjct: 904 VQFRSMRRARDVREQLEGLLER---VEVGLSSCQG---DYIRVRKAITAGYFYHTARLTR 957
Query: 642 NGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
+G +T++ Q VF++ NS E P WL+++E + F++ + S LL
Sbjct: 958 SG----YRTVKQQQTVFIHPNSSLFEEQ--PR-WLLYHELVLTTKEFMRQVLEIESSWLL 1010
Score = 424 (154.3 bits), Expect = 6.5e-82, Sum P(2) = 6.5e-82
Identities = 89/187 (47%), Positives = 121/187 (64%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
RR+LP + + LL AI+ +QV+II GETG GKTTQ+PQ++ E T +G I CTQ
Sbjct: 397 RRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTK-KGM--KIACTQ 453
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++AMSV+ RVA E G KLG VGY +R E T L + T G+LLR L + +L
Sbjct: 454 PRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLA 513
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+ V+VDE HER ++ D L ++KD+ RPEL++++ SATLD FS++F A V I
Sbjct: 514 SYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRI 573
Query: 185 PGFTYPV 191
PG +PV
Sbjct: 574 PGRRFPV 580
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 481 (174.4 bits), Expect = 8.4e-82, Sum P(2) = 8.4e-82
Identities = 137/420 (32%), Positives = 213/420 (50%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLL-LTCHGSMASSEQRLIFDEPESGV 343
PG +LVF+TG ++I + + LQ R LG R LL L + ++ S Q IF G
Sbjct: 612 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 671
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK+V+ATNIAETS+TI +++V+D G K+ SY+ L + S S
Sbjct: 672 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 731
Query: 404 XVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V G+C+RLY Y E +PEI RT L ++ L +KSL + + F L P
Sbjct: 732 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF--DFLDPPP 789
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ A+E L +GAL+H ELT G+ +A LP++P L KM++ ++C E +LT+ A
Sbjct: 790 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 849
Query: 523 GLSVRDP-FLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNF 581
LSV + F P DK A+ A+ F DHL L+ + W AE G + ++C++NF
Sbjct: 850 MLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQW--AESGYSS-QWCYENF 906
Query: 582 LSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ 641
+ SM+ +R++ LL+ V+ S C D +R I G + + + +
Sbjct: 907 VQFRSMRRARDVREQLEGLLER---VEVGLSSCQG---DYIRVRKAITAGYFYHTARLTR 960
Query: 642 NGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
+G +T++ Q VF++ NS E P WL+++E + F++ + S LL
Sbjct: 961 SG----YRTVKQQQTVFIHPNSSLFEEQ--PR-WLLYHELVLTTKEFMRQVLEIESSWLL 1013
Score = 423 (154.0 bits), Expect = 8.4e-82, Sum P(2) = 8.4e-82
Identities = 88/187 (47%), Positives = 121/187 (64%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
RR+LP + + LL AI+ +QV+II GETG GKTTQ+PQ++ E T +G I CTQ
Sbjct: 400 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTK-KGM--KIACTQ 456
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++AMSV+ RVA E G KLG VGY +R E T L + T G+LLR L + +L
Sbjct: 457 PRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLA 516
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+ V+VDE HER ++ D L ++KD+ RPEL++++ SATLD FS++F A + I
Sbjct: 517 SYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPIFRI 576
Query: 185 PGFTYPV 191
PG +PV
Sbjct: 577 PGRRFPV 583
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 481 (174.4 bits), Expect = 1.1e-81, Sum P(2) = 1.1e-81
Identities = 137/420 (32%), Positives = 213/420 (50%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLL-LTCHGSMASSEQRLIFDEPESGV 343
PG +LVF+TG ++I + + LQ R LG R LL L + ++ S Q IF G
Sbjct: 612 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 671
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK+V+ATNIAETS+TI +++V+D G K+ SY+ L + S S
Sbjct: 672 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 731
Query: 404 XVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V G+C+RLY Y E +PEI RT L ++ L +KSL + + F L P
Sbjct: 732 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF--DFLDPPP 789
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ A+E L +GAL+H ELT G+ +A LP++P L KM++ ++C E +LT+ A
Sbjct: 790 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 849
Query: 523 GLSVRDP-FLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNF 581
LSV + F P DK A+ A+ F DHL L+ + W AE G + ++C++NF
Sbjct: 850 MLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQW--AESGYSS-QWCYENF 906
Query: 582 LSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ 641
+ SM+ +R++ LL+ V+ S C D +R I G + + + +
Sbjct: 907 VQFRSMRRARDVREQLEGLLER---VEVGLSSCQG---DYIRVRKAITAGYFYHTARLTR 960
Query: 642 NGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
+G +T++ Q VF++ NS E P WL+++E + F++ + S LL
Sbjct: 961 SG----YRTVKQQQTVFIHPNSSLFEEQ--PR-WLLYHELVLTTKEFMRQVLEIESSWLL 1013
Score = 422 (153.6 bits), Expect = 1.1e-81, Sum P(2) = 1.1e-81
Identities = 87/187 (46%), Positives = 121/187 (64%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
RR+LP + + LL A++ +Q++II GETG GKTTQ+PQ++ E T +G I CTQ
Sbjct: 400 RRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQ-KGM--KIACTQ 456
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++AMSV+ RVA E G KLG VGY +R E T L + T G+LLR L + +L
Sbjct: 457 PRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLA 516
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+ V+VDE HER ++ D L ++KD+ RPEL++++ SATLD FS++F A V I
Sbjct: 517 SYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRI 576
Query: 185 PGFTYPV 191
PG +PV
Sbjct: 577 PGRRFPV 583
Score = 37 (18.1 bits), Expect = 3.7e-41, Sum P(2) = 3.7e-41
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 218 QEKMWKMSKQAPRKRKSQIASAVEDTLKAANFNEYSSQTRESL 260
+E+ + ++ P K K + T K + +E+ RE L
Sbjct: 134 EEEEEEEEEEVPEKGKKTTGGSKPQTEKPESEDEWERTERERL 176
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 481 (174.4 bits), Expect = 1.1e-81, Sum P(2) = 1.1e-81
Identities = 137/420 (32%), Positives = 213/420 (50%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLL-LTCHGSMASSEQRLIFDEPESGV 343
PG +LVF+TG ++I + + LQ R LG R LL L + ++ S Q IF G
Sbjct: 612 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 671
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK+V+ATNIAETS+TI +++V+D G K+ SY+ L + S S
Sbjct: 672 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 731
Query: 404 XVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V G+C+RLY Y E +PEI RT L ++ L +KSL + + F L P
Sbjct: 732 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF--DFLDPPP 789
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ A+E L +GAL+H ELT G+ +A LP++P L KM++ ++C E +LT+ A
Sbjct: 790 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 849
Query: 523 GLSVRDP-FLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNF 581
LSV + F P DK A+ A+ F DHL L+ + W AE G + ++C++NF
Sbjct: 850 MLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQW--AESGYSS-QWCYENF 906
Query: 582 LSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ 641
+ SM+ +R++ LL+ V+ S C D +R I G + + + +
Sbjct: 907 VQFRSMRRARDVREQLEGLLER---VEVGLSSCQG---DYIRVRKAITAGYFYHTARLTR 960
Query: 642 NGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
+G +T++ Q VF++ NS E P WL+++E + F++ + S LL
Sbjct: 961 SG----YRTVKQQQTVFIHPNSSLFEEQ--PR-WLLYHELVLTTKEFMRQVLEIESSWLL 1013
Score = 422 (153.6 bits), Expect = 1.1e-81, Sum P(2) = 1.1e-81
Identities = 87/187 (46%), Positives = 121/187 (64%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
RR+LP + + LL A++ +Q++II GETG GKTTQ+PQ++ E T +G I CTQ
Sbjct: 400 RRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQ-KGM--KIACTQ 456
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++AMSV+ RVA E G KLG VGY +R E T L + T G+LLR L + +L
Sbjct: 457 PRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLA 516
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+ V+VDE HER ++ D L ++KD+ RPEL++++ SATLD FS++F A V I
Sbjct: 517 SYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRI 576
Query: 185 PGFTYPV 191
PG +PV
Sbjct: 577 PGRRFPV 583
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 480 (174.0 bits), Expect = 1.1e-81, Sum P(2) = 1.1e-81
Identities = 137/420 (32%), Positives = 215/420 (51%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLL-LTCHGSMASSEQRLIFDEPESGV 343
PG +LVF+TG ++I + + LQ R LG R LL L + ++ S Q IF G
Sbjct: 608 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 667
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK+V+ATNIAETS+TI +++V+D G K+ SY+ L + S S
Sbjct: 668 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 727
Query: 404 XVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V G+C+RLY Y E +PEI RT L ++ L +KSL + + F L P
Sbjct: 728 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF--DFLDPPP 785
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ A+E L +GAL+H ELT G+ +A LP++P L KM++ ++C E +LT+ A
Sbjct: 786 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 845
Query: 523 GLSVRDP-FLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNF 581
LSV + F P DK A+ A+ F DHL L+ + W AE G + ++C++NF
Sbjct: 846 MLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQW--AESGYSS-QWCYENF 902
Query: 582 LSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ 641
+ SM+ +R++ LL+ V+ S C D +R I G + + + +
Sbjct: 903 VQFRSMRRARDVREQLEGLLER---VEVGLSSCQG---DYIRVRKAITAGYFYHTARLTR 956
Query: 642 NGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
+G +T++ Q VF++ NS + E + P WL+++E + F++ + S LL
Sbjct: 957 SG----YRTVKQQQTVFIHPNS-SLFEQQ-PR-WLLYHELVLTTKEFMRQVLEIESSWLL 1009
Score = 423 (154.0 bits), Expect = 1.1e-81, Sum P(2) = 1.1e-81
Identities = 88/187 (47%), Positives = 122/187 (65%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
RR+LP + + LL AI+ +QV+II GETG GKTTQ+PQ++ E T+ +G I CTQ
Sbjct: 396 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTN-KGM--KIACTQ 452
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++AMSV+ RVA E G KLG VGY +R E T L + T G+LLR L + +L
Sbjct: 453 PRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLA 512
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+ V+VDE HER ++ D L ++KD+ RPEL++++ SAT+D FS++F A V I
Sbjct: 513 SYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRI 572
Query: 185 PGFTYPV 191
PG +PV
Sbjct: 573 PGRRFPV 579
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 473 (171.6 bits), Expect = 2.0e-81, Sum P(2) = 2.0e-81
Identities = 128/424 (30%), Positives = 221/424 (52%)
Query: 283 KERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVL-LLTC--HGSMASSEQRLIFDEP 339
KE G VLVF+ G ++I ++ + L+ ++I G T++ L+ C + ++ S Q IF+
Sbjct: 609 KEPLGDVLVFLPGQEEIEAVEENLK-HKIRGLGTKIRELIICPIYANLPSELQAKIFEPT 667
Query: 340 ESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXX 399
G RK+VLATNIAETS+TI+ + +V+D G +K SY+ LL + IS S
Sbjct: 668 PEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRT 727
Query: 400 XXXXXVQPGECYRLYPRC-VYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRAL 458
PG+CYRLY Y+ + +PEI RT L S+ L +KSL + + F +
Sbjct: 728 GRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNF--DFM 785
Query: 459 QSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVL 518
P A+ ++E L +GAL+ ELT G+ +A P++P L KM+++ + C + ++
Sbjct: 786 DPPPSEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEII 845
Query: 519 TIVAGLSVRDP-FLAPMDKKDLAEAAKSQFS-HDYSDHLALVRAFEGWKDAERGLAGYEY 576
+I A LS+ F P DK+ A+ A F + DH+A ++ + WK+ ++
Sbjct: 846 SIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKETNYST---QW 902
Query: 577 CWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGI 636
C++N++ SMK +R + LL+ V+ D S NA D IR I G +P
Sbjct: 903 CYENYIQVRSMKRARDIRDQLEGLLER---VEIDVS-SNANELDS--IRKSIVAGFFPHT 956
Query: 637 SSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSD 696
+ + +NG S +T++ Q ++ + + +P W+V+++ + + +++ T +
Sbjct: 957 AKLQKNG---SYRTVKHPQT-VHIHPASGLSQVLPR-WVVYHQLVLTSKEYMRQVTELKP 1011
Query: 697 SVLL 700
L+
Sbjct: 1012 EWLI 1015
Score = 428 (155.7 bits), Expect = 2.0e-81, Sum P(2) = 2.0e-81
Identities = 90/189 (47%), Positives = 123/189 (65%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R+ LP Y +++LL A+ +QV+II GETG GKTTQ+PQ++ E+ T + G V C
Sbjct: 399 EDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKL-GKVG---C 454
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++AMSV+ RVA E G KLG VGY +R E T L + T G+LLR LL + +
Sbjct: 455 TQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPD 514
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L + +IVDE HER + D L ++KD+ RP+L+L++ SAT+DAE FS +F A +
Sbjct: 515 LGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIF 574
Query: 183 NIPGFTYPV 191
PG YPV
Sbjct: 575 RFPGRRYPV 583
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 427 (155.4 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 93/196 (47%), Positives = 121/196 (61%)
Query: 335 IFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVS 394
+FD GVRK +L+TNIAETS+TI+ + FV+D GK KE SYD L WIS S
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 395 XXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFL 454
PG C+RLY YDAFA Y +PEI R L SL LQ+KS+ +G F
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTF- 458
Query: 455 SRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCL 514
++ P +++ AI YL+ GALD +E LT +G LA LP++ +GKMLILG++F+ +
Sbjct: 459 -PFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLV 517
Query: 515 EPVLTIVAGLSVRDPF 530
EPVLTI A LSV+ PF
Sbjct: 518 EPVLTIAAALSVQSPF 533
Score = 416 (151.5 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 82/187 (43%), Positives = 127/187 (67%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP + NR+L + ++QVV+++G+TGCGK+TQVPQ++L + + V CTQ
Sbjct: 159 RAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVA-------CTQ 211
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRRI+ +S+++RV E + G VGY++R E + T+++F T G+LLR++ + +L
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 271
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+IVDEVHER ++ DFLL VL+ LL RP+L+++LMSAT++ LFSSYF A V+ +
Sbjct: 272 QYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQV 331
Query: 185 PGFTYPV 191
PG +P+
Sbjct: 332 PGRLFPI 338
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 456 (165.6 bits), Expect = 4.0e-80, Sum P(2) = 4.0e-80
Identities = 120/405 (29%), Positives = 207/405 (51%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKL-QANRILGDPT-RVLLLTCHGSMASSEQRLIFDEPES 341
E PG +L+F+TG ++I++ + L + + LG +++L + ++ S Q IFD
Sbjct: 783 EPPGDMLLFLTGQEEIDTACEILYERMKALGPSVPELVILPVYSALPSEMQSRIFDPAPP 842
Query: 342 GVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXX 401
G RK+V+ATNIAETSITI+++ +VID G K+ +YD L+ + IS
Sbjct: 843 GGRKVVIATNIAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGR 902
Query: 402 XXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQS 460
PG+C+RLY Y + +P+I R L L +K++ + + F +
Sbjct: 903 AGRTGPGKCFRLYTEAAYQSEMLPTTIPDIQRQNLSHTILMLKAMGINDLLHF--DFMDP 960
Query: 461 PELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTI 520
P + A+E L + ALD LT LG+ +A PMEP L K+LI C E +L+I
Sbjct: 961 PPTNTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPALAKVLIASVDMGCSEEMLSI 1020
Query: 521 VAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKN 580
VA LS++ F P +K+ A+ K++F + DHL L+ + WK + G + +C++N
Sbjct: 1021 VAMLSIQSVFYRPKEKQQQADQKKAKFHDPHGDHLTLLNVYNAWKRS--GFSN-AWCYEN 1077
Query: 581 FLSAPSMKVIDSLRKEFLSLLK--DTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISS 638
F+ A ++ +R++ L +++ +V C GR+ +R +C G + +
Sbjct: 1078 FIQARQIRRAQDVRQQLLGIMQRYHHKIVSC--------GRNTTKVRQALCTGFF---RN 1126
Query: 639 IVQNGKSSSLKTMEDGQ-VFLY-SNSVNARESE-IPYPWLVFNEK 680
+ KT+ +G V+++ S+++ + +E + Y LV K
Sbjct: 1127 SARKDPQEGYKTLVEGTPVYMHPSSAMFGKPAEHVIYHTLVLTTK 1171
Score = 437 (158.9 bits), Expect = 4.0e-80, Sum P(2) = 4.0e-80
Identities = 88/194 (45%), Positives = 133/194 (68%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R +LP YK + +LL A+++NQ++I+ G+TG GKTTQV Q++ E+ + +G + CTQ
Sbjct: 574 RESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWAN-KGIIG---CTQ 629
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++AMSV++RVA E G KLG VGY +R E +T++ + T G+L R +L+D +LK
Sbjct: 630 PRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREVLLDPDLK 689
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+ +++DE HER + D L +LK L RRP+LRL++ SATLDA+ FS YF G + +I
Sbjct: 690 KYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLDADKFSEYFYGCPIFSI 749
Query: 185 PGFTYPVRTHFLED 198
PG T+PV + ++
Sbjct: 750 PGRTFPVEIMYSKE 763
Score = 39 (18.8 bits), Expect = 3.1e-38, Sum P(2) = 3.1e-38
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 122 NLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMS 164
NL GV + VH M E + DL+SR +++ ++S
Sbjct: 292 NLVGVRGKVDGLVHVSAMQEGTRVNHPSDLVSRGQPVKVKVIS 334
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 443 (161.0 bits), Expect = 1.0e-79, Sum P(2) = 1.0e-79
Identities = 89/205 (43%), Positives = 130/205 (63%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ RR+LP + ++ L Q+++ GETG GKTTQ+PQF+L E+ + G +
Sbjct: 87 ILKTRRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLYDEMPHLTGK--QV 144
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV+ RVA E +LGE VGY +R E G T L + T G+LLR + D
Sbjct: 145 ACTQPRRVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTILKYMTDGMLLREAMED 204
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L + +I+DE HER + D L+ +LK + RRP+L++++MSATLDAE F +YF A
Sbjct: 205 HDLTRYSCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMSATLDAEKFQNYFNNAP 264
Query: 181 VINIPGFTYPVRTH----FLEDILD 201
++ +PG T+PV + F D LD
Sbjct: 265 LLAVPGRTHPVEIYYTPEFQRDYLD 289
Score = 436 (158.5 bits), Expect = 1.0e-79, Sum P(2) = 1.0e-79
Identities = 129/437 (29%), Positives = 222/437 (50%)
Query: 284 ERPGAVLVFMTGWDDINSLNDK--LQANRILGD----PTRVLLLTCHGSMASSEQRLIFD 337
E G +L+F+TG ++I K L+ + ++ + P +V L +GS+ +Q+ IF+
Sbjct: 302 EGEGDILLFLTGEEEIEDACRKISLEGDELVREQNCGPLKVYPL--YGSLPPHQQQKIFE 359
Query: 338 ----EPE-SGV--RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWI 390
P +G RK++++TNIAETS+TI+ +V+V+D G +K+ Y+ LL S I
Sbjct: 360 PAPTNPNPNGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPI 419
Query: 391 STVSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGT 449
S S +PG+C+RLY + E PEILR+ L S L++K L +
Sbjct: 420 SKASAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDD 479
Query: 450 IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGA 509
+ F +PE + A+E L + L +LT LG+ + P++P L MLI
Sbjct: 480 LVHFDFMDPPAPETM--MRALEELNYLQCLSDEGDLTALGRLASQFPLDPMLAVMLIGSP 537
Query: 510 IFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAER 569
++C E +LTIVA LSV + F+ P + A+ AK F+ DHL L+ +E + E
Sbjct: 538 AYSCSEEILTIVAMLSVPNVFVRPASARKRADEAKLSFAQADGDHLTLINVYEAFISPEA 597
Query: 570 GLAG-YEYCWKNFLSAPSMKVIDSLRKEFLSLLK--DTGLVDCDTSICNA--WGRDERFI 624
G +++C NFLS S+ ++R + L++ D L+ + W E
Sbjct: 598 SEIGTHKWCRDNFLSYRSLTSAKNVRNQLQRLMQKYDLQLISQYNQVSEFEYW---ENVK 654
Query: 625 RAVICYGLYPGISSIVQNGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKV 683
+A++ G + ++ ++G L T++D Q V ++ ++V ++E E WL++NE +
Sbjct: 655 KALVA-GFFMQVAK-KKSGNKGYL-TVKDNQDVLIHPSTVLSKEGE----WLIYNEFVLT 707
Query: 684 NSVFLKDSTAVSDSVLL 700
+ +++ T V L+
Sbjct: 708 SKNYIRTVTVVKPEWLV 724
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 443 (161.0 bits), Expect = 2.7e-79, Sum P(2) = 2.7e-79
Identities = 122/422 (28%), Positives = 216/422 (51%)
Query: 287 GAVLVFMTGWDDINSLNDKLQANRI--LGDPTRVLLLTCHGSMASSEQRLIFDEPESGVR 344
G +LVFMTG +DI + + + A+R+ L D R+ +L + M + Q IFD E GVR
Sbjct: 701 GDILVFMTGQEDIEATCEII-ADRLNQLHDAPRLSILPIYSQMPADLQAKIFDSAEPGVR 759
Query: 345 KIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXX 404
K+V+ATNIAETS+T++ + +V+D G K Y++ L + IS +
Sbjct: 760 KVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGR 819
Query: 405 VQPGECYRLYPRCVY--DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
PG YRLY Y + F E LPEI RT L + L +KSL + I+ F + P
Sbjct: 820 TGPGIAYRLYTEMAYIREMF-ETTLPEIQRTNLSNTVLILKSLGVEEISDF--DFMDRPP 876
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ ++ L +GALD+ +LT LG+ +++ PM+P L K++I+ + C E ++TIV+
Sbjct: 877 NDTLMASLYELWTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVS 936
Query: 523 GLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFL 582
LSV F P ++ + ++AA+ +F+ SDHL L+ ++ W+ G + +C K+FL
Sbjct: 937 MLSVPSVFYRPKERAEESDAAREKFNVPESDHLMLLNIYQHWQ--RNGYSN-SWCSKHFL 993
Query: 583 SAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQN 642
+ ++K +R++ + ++ + + W +R V+C + +
Sbjct: 994 HSKTLKRARDIRQQLVEIMSKQKI---SLESVSDWD----IVRRVLCSAYFHQAACAKGI 1046
Query: 643 GKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLF 702
G+ L++ + + S+ +P +++++E + + ++ T+V L F
Sbjct: 1047 GEYVHLRSGMPCHLHVTSSLYGL--GYLP-DYVIYHELVLTSKEYMNIVTSVDPYWLAEF 1103
Query: 703 GG 704
GG
Sbjct: 1104 GG 1105
Score = 442 (160.7 bits), Expect = 2.7e-79, Sum P(2) = 2.7e-79
Identities = 91/193 (47%), Positives = 131/193 (67%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R LPA+ + +LL+ I NQV+I+ GETG GKTTQ+ QF+ E R + I C
Sbjct: 487 EQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYH--RNGM--IGC 542
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++AMSV++RV+ E G +LG +VGY +R E + G DT + + T G+LLR L+ N
Sbjct: 543 TQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNN 602
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L+ + +I+DE HER +N D L+ +LK +LSRR +++L++ SAT++++ FS +FGGA
Sbjct: 603 LEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQF 662
Query: 183 NIPGFTYPVRTHF 195
IPG TYPV F
Sbjct: 663 TIPGRTYPVDIMF 675
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 488 (176.8 bits), Expect = 3.3e-79, Sum P(2) = 3.3e-79
Identities = 128/419 (30%), Positives = 215/419 (51%)
Query: 280 ICEKERPGAVLVFMTGWDDINSLNDKLQ--ANRILGDPTRVLLLTCHGSMASSEQRLIFD 337
I + E PG +LVF+TG D++ + +KL+ A L + R+ ++ C+G++ + EQ FD
Sbjct: 290 IHKHENPGDILVFLTGQDEVEDVCEKLRELAGN-LKNCDRLWVVPCYGALPAREQMKAFD 348
Query: 338 EPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXX 397
G RK+V+ATNIAE SITI + +VID G K + A N L+ +S S
Sbjct: 349 STPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQ 408
Query: 398 XXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRA 457
++PG+CYRLYP ++ FAE +PEI R + S LQ+K+L + + F
Sbjct: 409 RAGRAGRIRPGKCYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRF--HY 466
Query: 458 LQSPELLAVQNAIEYLKIIGALDHNEELTV-LGQYLAMLPMEPKLGKMLILGAIFNCLEP 516
L P A+ N +E L +GA+D +LT LG +A P+ P K L+ A F C
Sbjct: 467 LSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTE 526
Query: 517 VLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEY 576
++TIVA + ++D F+ P ++ A+ + +F+ + DH+ ++ F K E G + ++
Sbjct: 527 MVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFT--KFVENGRSK-KW 583
Query: 577 CWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDT-SICNAWGRDERFIRAVICYGLYPG 635
C +F++ + D++R + + LLK + + + N E IR + G +
Sbjct: 584 CSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINC---SEN-IRQCLVTGFFSQ 639
Query: 636 ISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAV 694
+ GK ++K E +Y S + + P W++F E M+ +S+ +D T +
Sbjct: 640 AAQYHYTGKYMTVK--ESFPFNMYKGSSIMFKKDYP-KWVIFTEVMQ-DSI--RDVTVI 692
Score = 377 (137.8 bits), Expect = 3.3e-79, Sum P(2) = 3.3e-79
Identities = 82/200 (41%), Positives = 124/200 (62%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP +K + +L + + +II GETGCGK+TQVPQF+LE+ + G I+ TQ
Sbjct: 74 RIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAG-WAADGR--QIVITQ 130
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++ ++++ RVA E+ LG VGY VR + + +DT++ F T G+LLR +L D L
Sbjct: 131 PRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLLS 190
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYF-----GG- 178
+ +++DE HER N D LL +L+ ++ R +LR+++ SATLDAELF +F G
Sbjct: 191 KYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGNS 250
Query: 179 ----ATVINIPGFTYPVRTH 194
A +I++ G T+PV H
Sbjct: 251 DKDTAGIISVEGRTHPVAVH 270
Score = 39 (18.8 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 754 LNIHTHEDLLAAVRLLVAEDQCE 776
+NIH HE+ + L +D+ E
Sbjct: 288 INIHKHENPGDILVFLTGQDEVE 310
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 458 (166.3 bits), Expect = 5.7e-79, Sum P(2) = 5.7e-79
Identities = 118/423 (27%), Positives = 218/423 (51%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKL-QANRILGDPT-RVLLLTCHGSMASSEQRLIFDEPES 341
E PG +LVF+TG ++I++ + L + +++LGD +++L + ++ S Q IF+
Sbjct: 717 EGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPP 776
Query: 342 GVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXX 401
G RK+V+ATNIAETS+TI+ + +V+D G K++ +D L+ + IS
Sbjct: 777 GGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGR 836
Query: 402 XXXVQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQS 460
PG+CYRLY Y + +PEI R L L +K++ + + F +
Sbjct: 837 AGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNF--DFMDP 894
Query: 461 PELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTI 520
P + A++ L + ALD LT LG+ +A PMEP+L K+LI C E +L+I
Sbjct: 895 PPAQTMIAALQNLYALSALDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSI 954
Query: 521 VAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKN 580
+A LSV + + P +K+ A+ ++QF++ SDHL L+ + WK R +C+++
Sbjct: 955 IAMLSVPNIWSRPREKQQEADRQRAQFANPESDHLTLLNVYTTWK-MNR--CSDNWCYEH 1011
Query: 581 FLSAPSMKVIDSLRKEFLSLLKDTG--LVDCDTSICNAWGRDERFIRAVICYGLYPGISS 638
++ A M+ + +RK+ + L+ +V C GR I +C G + ++
Sbjct: 1012 YIQARGMRRAEDVRKQLIRLMDRYRHPVVSC--------GRKRELILRALCSGYFTNVAK 1063
Query: 639 IVQNGKSSSLKTM-EDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDS 697
++ KT+ E+ V+++ + V ++ W++++E ++ + ++ + V+
Sbjct: 1064 --RDSHEGCYKTIVENAPVYMHPSGVLFGKAA---EWVIYHELIQTSKEYMHTVSTVNPK 1118
Query: 698 VLL 700
L+
Sbjct: 1119 WLV 1121
Score = 423 (154.0 bits), Expect = 5.7e-79, Sum P(2) = 5.7e-79
Identities = 88/191 (46%), Positives = 125/191 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M E R LP +K + + L A+S+NQ++++ GETG GKTTQ+ Q++ E TS +
Sbjct: 503 MKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIG-- 560
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RVA E G ++GE VGY +R E R T++ + T G+L R LVD
Sbjct: 561 -CTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVD 619
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L + +I+DE HER + D L +LK + +RP+L+L++ SATLDAE FSSYF
Sbjct: 620 PLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCP 679
Query: 181 VINIPGFTYPV 191
+ IPG +YPV
Sbjct: 680 IFTIPGRSYPV 690
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 457 (165.9 bits), Expect = 1.0e-78, Sum P(2) = 1.0e-78
Identities = 128/414 (30%), Positives = 212/414 (51%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPT-RVLLLTCHGSMASSEQRLIFDEPESGV 343
PG +LVF+TG ++I + LQ R LG+ +++ + ++ S Q IF+
Sbjct: 690 PGDILVFLTGQEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPPKA 749
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK+VLATNIAETS+TI+ +V+VID G KE ++ L+ + S S
Sbjct: 750 RKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAG 809
Query: 404 XVQPGECYRLYPR-CVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V PG+C+RLY + Y+ E PEI RT L S+ L +KSL + + F + P
Sbjct: 810 RVGPGKCFRLYTKWAYYNELEESTTPEIQRTNLSSVILMLKSLGIDQLLEF--DFMDPPP 867
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ A+E L +GAL+ ELT +G+ +A P +P L K ++ C+E VL+IV+
Sbjct: 868 AETIIRALEQLYALGALNDRGELTKIGRQMAEFPTDPMLAKAILAADKHGCVEEVLSIVS 927
Query: 523 GLSVRDP-FLAPMDKKDLAEAAKSQFS-HDYSDHLALVRAFEGWKDAERGLAGYEYCW-- 578
L F P DKK A++A+++F+ D DHL L+ + W D++ + Y W
Sbjct: 928 MLGEASALFFRPKDKKIHADSARNRFTVKDGGDHLTLLNIWNQWVDSD-----FSYVWAK 982
Query: 579 KNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISS 638
+NFL S+ +R + L+ L D V+ S C + + I+ I G +P +
Sbjct: 983 ENFLQQRSLTRARDVRDQ-LAKLCDR--VEVTVSSCGS--NNIVPIQKAITAGFFPNAAR 1037
Query: 639 IVQNGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDS 691
+ + G S +T++ GQ V+L+ +S E+ W+++ E + + +++ +
Sbjct: 1038 LQRGG--DSYRTIKTGQTVYLHPSSTLF---EVNPRWVIYFELVLTSKEYMRSN 1086
Score = 421 (153.3 bits), Expect = 1.0e-78, Sum P(2) = 1.0e-78
Identities = 86/193 (44%), Positives = 125/193 (64%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R+ LP Y+ +++++ A+ +QV+II GETG GKTTQ+PQ++ E+ T G + CTQ
Sbjct: 478 RKKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEAGYTK-NGM--KVGCTQ 534
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++AMSV+ RVA E G KLG VGY +R E T L + T G+LLR LL + +L
Sbjct: 535 PRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKYMTDGMLLRELLTEPDLG 594
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+ +++DE HER + D +LKD+ RP+L+L++ SAT+DA+ F SYF A + NI
Sbjct: 595 QYSALMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQSYFDNAPIFNI 654
Query: 185 PGFTYPVRTHFLE 197
PG Y V H+ +
Sbjct: 655 PGRMYNVDIHYTQ 667
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 447 (162.4 bits), Expect = 1.8e-78, Sum P(2) = 1.8e-78
Identities = 130/420 (30%), Positives = 211/420 (50%)
Query: 287 GAVLVFMTGWDDINSLNDKLQAN-RILGDPT-RVLLLTCHGSMASSEQRLIFDEPESGVR 344
G +LVF+TG D+I +++ +Q RILG ++L + ++ S Q IFD G R
Sbjct: 628 GDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGAR 687
Query: 345 KIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXX 404
K+VLATNIAETSITI+ V FVID G K+ Y+ L+ S S
Sbjct: 688 KVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGR 747
Query: 405 VQPGECYRLYPRCVYDAFAEYQL-PEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
V PG+C+RLY R Y+ + PEI RT L ++ L +KSL + + F PE
Sbjct: 748 VGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPET 807
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
L ++E L +GAL++ ELT LG+ +A P +P L K LI + + C+E VL+IV+
Sbjct: 808 L--MRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSM 865
Query: 524 LSVRDP-FLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFL 582
L F P DK A+ A++ F+ DHL L+ + W D + Y + +NFL
Sbjct: 866 LGEASSLFYRPKDKIMEADKARANFTQPGGDHLTLLHIWNEWVDTD---FSYNWARENFL 922
Query: 583 SAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQN 642
S+ +R + +L + V+ + ++ D I+ I G + + + ++
Sbjct: 923 QYKSLCRARDVRDQLANLCER---VEIELVTNSSESLDP--IKKAITAGYFSNAARLDRS 977
Query: 643 GKSSSLKTMEDGQ-VFLY-SNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
G S +T++ Q V+++ S+SV ++ ++ +++ E + + + T + LL
Sbjct: 978 G--DSYRTVKSNQTVYIHPSSSVAEKKPKV----IIYFELVLTTKEYCRQITEIQPEWLL 1031
Score = 428 (155.7 bits), Expect = 1.8e-78, Sum P(2) = 1.8e-78
Identities = 85/191 (44%), Positives = 126/191 (65%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R++LP Y+ K+ LL AI++ QV++I ETG GKTTQ+PQF+ E+ T +C CTQ
Sbjct: 415 RKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKIC---CTQ 471
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++AMSV+ RVA E +LG+ VGY +R E T + + T G+LLR L + +L
Sbjct: 472 PRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLA 531
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+ +I+DE HER ++ D L ++KD+ RP+L++++ SAT+DAE FS+YF A V +
Sbjct: 532 SYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYV 591
Query: 185 PGFTYPVRTHF 195
PG YPV ++
Sbjct: 592 PGRRYPVDIYY 602
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 475 (172.3 bits), Expect = 2.5e-78, Sum P(2) = 2.5e-78
Identities = 130/433 (30%), Positives = 225/433 (51%)
Query: 279 YICEKERPGAVLVFMTGWDDINSLNDKLQAN-RILG-DPTRVLLLTCHGSMASSEQRLIF 336
++CE++ G VL+F+TG ++I+ +++ LG D + ++ + ++ +Q+ IF
Sbjct: 317 HMCEEDE-GDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQQQRIF 375
Query: 337 DEPE----SGV--RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWI 390
+ P +G RK+V++TNIAETS+TI+ VVFVID G AK+ Y+ LL + I
Sbjct: 376 EPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAI 435
Query: 391 STVSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGT 449
S S +PG+C+RLY Y + PEILR+ L S+ LQ+K L +
Sbjct: 436 SKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDD 495
Query: 450 IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGA 509
+ F +PE L A+E L + AL+ + +LT LG +A P++P+L KM+I
Sbjct: 496 LVHFDFMDPPAPETL--MRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASC 553
Query: 510 IFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAER 569
FNC VL+I A LSV F+ P + K A+ +K +F+H DHL L+ + +K
Sbjct: 554 DFNCSNEVLSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHAFKQNHE 613
Query: 570 GLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERF-IRAVI 628
+ ++C+ NF++ S+ D++R++ ++ L T + RD IR +
Sbjct: 614 SV---QWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTS---RDYYINIRRAL 667
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQVF-LYSNSVNARESEIPYPWLVFNEKMKVNSVF 687
G + ++ + + G T++D QV L+ ++V + E W+++NE + +
Sbjct: 668 VTGFFMQVAHLERTGH---YLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLTTKNY 720
Query: 688 LKDSTAVSDSVLL 700
++ T + L+
Sbjct: 721 IRTCTDIKPEWLV 733
Score = 387 (141.3 bits), Expect = 2.5e-78, Sum P(2) = 2.5e-78
Identities = 79/195 (40%), Positives = 123/195 (63%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP ++ K R ++++Q ++ GETG GKTTQ+PQ+ ++ + S+ G +
Sbjct: 104 ILKKRLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDM-VRSLPGPKRGV 162
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RVA E LG+ VGY +R E T L + T G+LLR + D
Sbjct: 163 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 222
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+ +I+DE HER + D L+ VLK+++ +R +L++++MSATLDA F YF
Sbjct: 223 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCP 282
Query: 181 VINIPGFTYPVRTHF 195
++ IPG T+PV +
Sbjct: 283 LLTIPGRTHPVEIFY 297
Score = 42 (19.8 bits), Expect = 7.6e-32, Sum P(2) = 7.6e-32
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 512 NCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAA 543
NC P+LTI + F P ++D EAA
Sbjct: 280 NC--PLLTIPGRTHPVEIFYTPEPERDYLEAA 309
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 473 (171.6 bits), Expect = 6.2e-78, Sum P(2) = 6.2e-78
Identities = 129/433 (29%), Positives = 225/433 (51%)
Query: 279 YICEKERPGAVLVFMTGWDDINSLNDKLQAN-RILGDPTR-VLLLTCHGSMASSEQRLIF 336
++CE+E G +L+F+TG ++I+ +++ LG + ++ + ++ +Q+ IF
Sbjct: 343 HMCEEEE-GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIF 401
Query: 337 DEP----ESGV--RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWI 390
+ P ++G RK+V++TNIAETS+TI+ VVFVID G AK+ Y+ LL + I
Sbjct: 402 EPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAI 461
Query: 391 STVSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGT 449
S S +PG+C+RLY Y + PEILR+ L S+ LQ+K L +
Sbjct: 462 SKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDD 521
Query: 450 IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGA 509
+ F +PE L A+E L + AL+ + +LT LG +A P++P+L KM+I
Sbjct: 522 LVHFDFMDPPAPETL--MRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASC 579
Query: 510 IFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAER 569
+NC VL+I A LSV F+ P + K A+ AK +F+H DHL L+ + +K
Sbjct: 580 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHE 639
Query: 570 GLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERF-IRAVI 628
+ ++C+ NF++ S+ D++R++ ++ L T + RD IR +
Sbjct: 640 SV---QWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTS---RDYYINIRKAL 693
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQVF-LYSNSVNARESEIPYPWLVFNEKMKVNSVF 687
G + ++ + + G T++D QV L+ ++V + E W+++NE + +
Sbjct: 694 VTGYFMQVAHLERTGH---YLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLTTKNY 746
Query: 688 LKDSTAVSDSVLL 700
++ T + L+
Sbjct: 747 IRTCTDIKPEWLV 759
Score = 387 (141.3 bits), Expect = 6.2e-78, Sum P(2) = 6.2e-78
Identities = 80/195 (41%), Positives = 123/195 (63%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP ++ K+R + ++Q ++ GETG GKTTQ+PQ+ +E + S+ G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGV 188
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RVA E LG+ VGY +R E T L + T G+LLR + D
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+ +I+DE HER + D L+ VLK+++ +R +L++++MSATLDA F YF
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 181 VINIPGFTYPVRTHF 195
++ IPG T+PV +
Sbjct: 309 LLTIPGRTHPVEIFY 323
Score = 42 (19.8 bits), Expect = 9.3e-32, Sum P(2) = 9.3e-32
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 512 NCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAA 543
NC P+LTI + F P ++D EAA
Sbjct: 306 NC--PLLTIPGRTHPVEIFYTPEPERDYLEAA 335
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 473 (171.6 bits), Expect = 6.2e-78, Sum P(2) = 6.2e-78
Identities = 129/433 (29%), Positives = 225/433 (51%)
Query: 279 YICEKERPGAVLVFMTGWDDINSLNDKLQAN-RILGDPTR-VLLLTCHGSMASSEQRLIF 336
++CE+E G +L+F+TG ++I+ +++ LG + ++ + ++ +Q+ IF
Sbjct: 343 HMCEEEE-GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIF 401
Query: 337 DEP----ESGV--RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWI 390
+ P ++G RK+V++TNIAETS+TI+ VVFVID G AK+ Y+ LL + I
Sbjct: 402 EPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAI 461
Query: 391 STVSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGT 449
S S +PG+C+RLY Y + PEILR+ L S+ LQ+K L +
Sbjct: 462 SKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDD 521
Query: 450 IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGA 509
+ F +PE L A+E L + AL+ + +LT LG +A P++P+L KM+I
Sbjct: 522 LVHFDFMDPPAPETL--MRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASC 579
Query: 510 IFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAER 569
+NC VL+I A LSV F+ P + K A+ AK +F+H DHL L+ + +K
Sbjct: 580 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHE 639
Query: 570 GLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERF-IRAVI 628
+ ++C+ NF++ S+ D++R++ ++ L T + RD IR +
Sbjct: 640 SV---QWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTS---RDYYINIRKAL 693
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQVF-LYSNSVNARESEIPYPWLVFNEKMKVNSVF 687
G + ++ + + G T++D QV L+ ++V + E W+++NE + +
Sbjct: 694 VTGYFMQVAHLERTGH---YLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLTTKNY 746
Query: 688 LKDSTAVSDSVLL 700
++ T + L+
Sbjct: 747 IRTCTDIKPEWLV 759
Score = 387 (141.3 bits), Expect = 6.2e-78, Sum P(2) = 6.2e-78
Identities = 80/195 (41%), Positives = 123/195 (63%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP ++ K+R + ++Q ++ GETG GKTTQ+PQ+ +E + S+ G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGV 188
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RVA E LG+ VGY +R E T L + T G+LLR + D
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+ +I+DE HER + D L+ VLK+++ +R +L++++MSATLDA F YF
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 181 VINIPGFTYPVRTHF 195
++ IPG T+PV +
Sbjct: 309 LLTIPGRTHPVEIFY 323
Score = 42 (19.8 bits), Expect = 9.3e-32, Sum P(2) = 9.3e-32
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 512 NCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAA 543
NC P+LTI + F P ++D EAA
Sbjct: 306 NC--PLLTIPGRTHPVEIFYTPEPERDYLEAA 335
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 473 (171.6 bits), Expect = 6.2e-78, Sum P(2) = 6.2e-78
Identities = 129/433 (29%), Positives = 225/433 (51%)
Query: 279 YICEKERPGAVLVFMTGWDDINSLNDKLQAN-RILGDPTR-VLLLTCHGSMASSEQRLIF 336
++CE+E G +L+F+TG ++I+ +++ LG + ++ + ++ +Q+ IF
Sbjct: 343 HMCEEEE-GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIF 401
Query: 337 DEP----ESGV--RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWI 390
+ P ++G RK+V++TNIAETS+TI+ VVFVID G AK+ Y+ LL + I
Sbjct: 402 EPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAI 461
Query: 391 STVSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGT 449
S S +PG+C+RLY Y + PEILR+ L S+ LQ+K L +
Sbjct: 462 SKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDD 521
Query: 450 IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGA 509
+ F +PE L A+E L + AL+ + +LT LG +A P++P+L KM+I
Sbjct: 522 LVHFDFMDPPAPETL--MRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASC 579
Query: 510 IFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAER 569
+NC VL+I A LSV F+ P + K A+ AK +F+H DHL L+ + +K
Sbjct: 580 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHE 639
Query: 570 GLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERF-IRAVI 628
+ ++C+ NF++ S+ D++R++ ++ L T + RD IR +
Sbjct: 640 SV---QWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTS---RDYYINIRKAL 693
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQVF-LYSNSVNARESEIPYPWLVFNEKMKVNSVF 687
G + ++ + + G T++D QV L+ ++V + E W+++NE + +
Sbjct: 694 VTGYFMQVAHLERTGH---YLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLTTKNY 746
Query: 688 LKDSTAVSDSVLL 700
++ T + L+
Sbjct: 747 IRTCTDIKPEWLV 759
Score = 387 (141.3 bits), Expect = 6.2e-78, Sum P(2) = 6.2e-78
Identities = 80/195 (41%), Positives = 123/195 (63%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP ++ K+R + ++Q ++ GETG GKTTQ+PQ+ +E + S+ G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGV 188
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RVA E LG+ VGY +R E T L + T G+LLR + D
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+ +I+DE HER + D L+ VLK+++ +R +L++++MSATLDA F YF
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 181 VINIPGFTYPVRTHF 195
++ IPG T+PV +
Sbjct: 309 LLTIPGRTHPVEIFY 323
Score = 42 (19.8 bits), Expect = 9.3e-32, Sum P(2) = 9.3e-32
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 512 NCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAA 543
NC P+LTI + F P ++D EAA
Sbjct: 306 NC--PLLTIPGRTHPVEIFYTPEPERDYLEAA 335
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 473 (171.6 bits), Expect = 6.2e-78, Sum P(2) = 6.2e-78
Identities = 129/433 (29%), Positives = 225/433 (51%)
Query: 279 YICEKERPGAVLVFMTGWDDINSLNDKLQAN-RILGDPTR-VLLLTCHGSMASSEQRLIF 336
++CE+E G +L+F+TG ++I+ +++ LG + ++ + ++ +Q+ IF
Sbjct: 343 HMCEEEE-GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIF 401
Query: 337 DEP----ESGV--RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWI 390
+ P ++G RK+V++TNIAETS+TI+ VVFVID G AK+ Y+ LL + I
Sbjct: 402 EPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAI 461
Query: 391 STVSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGT 449
S S +PG+C+RLY Y + PEILR+ L S+ LQ+K L +
Sbjct: 462 SKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDD 521
Query: 450 IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGA 509
+ F +PE L A+E L + AL+ + +LT LG +A P++P+L KM+I
Sbjct: 522 LVHFDFMDPPAPETL--MRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASC 579
Query: 510 IFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAER 569
+NC VL+I A LSV F+ P + K A+ AK +F+H DHL L+ + +K
Sbjct: 580 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHE 639
Query: 570 GLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERF-IRAVI 628
+ ++C+ NF++ S+ D++R++ ++ L T + RD IR +
Sbjct: 640 SV---QWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTS---RDYYINIRKAL 693
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQVF-LYSNSVNARESEIPYPWLVFNEKMKVNSVF 687
G + ++ + + G T++D QV L+ ++V + E W+++NE + +
Sbjct: 694 VTGYFMQVAHLERTGH---YLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLTTKNY 746
Query: 688 LKDSTAVSDSVLL 700
++ T + L+
Sbjct: 747 IRTCTDIKPEWLV 759
Score = 387 (141.3 bits), Expect = 6.2e-78, Sum P(2) = 6.2e-78
Identities = 80/195 (41%), Positives = 123/195 (63%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP ++ K+R + ++Q ++ GETG GKTTQ+PQ+ +E + S+ G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGV 188
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RVA E LG+ VGY +R E T L + T G+LLR + D
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+ +I+DE HER + D L+ VLK+++ +R +L++++MSATLDA F YF
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 181 VINIPGFTYPVRTHF 195
++ IPG T+PV +
Sbjct: 309 LLTIPGRTHPVEIFY 323
Score = 42 (19.8 bits), Expect = 9.3e-32, Sum P(2) = 9.3e-32
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 512 NCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAA 543
NC P+LTI + F P ++D EAA
Sbjct: 306 NC--PLLTIPGRTHPVEIFYTPEPERDYLEAA 335
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 473 (171.6 bits), Expect = 6.2e-78, Sum P(2) = 6.2e-78
Identities = 129/433 (29%), Positives = 225/433 (51%)
Query: 279 YICEKERPGAVLVFMTGWDDINSLNDKLQAN-RILGDPTR-VLLLTCHGSMASSEQRLIF 336
++CE+E G +L+F+TG ++I+ +++ LG + ++ + ++ +Q+ IF
Sbjct: 343 HMCEEEE-GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIF 401
Query: 337 DEP----ESGV--RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWI 390
+ P ++G RK+V++TNIAETS+TI+ VVFVID G AK+ Y+ LL + I
Sbjct: 402 EPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAI 461
Query: 391 STVSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGT 449
S S +PG+C+RLY Y + PEILR+ L S+ LQ+K L +
Sbjct: 462 SKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDD 521
Query: 450 IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGA 509
+ F +PE L A+E L + AL+ + +LT LG +A P++P+L KM+I
Sbjct: 522 LVHFDFMDPPAPETL--MRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASC 579
Query: 510 IFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAER 569
+NC VL+I A LSV F+ P + K A+ AK +F+H DHL L+ + +K
Sbjct: 580 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHE 639
Query: 570 GLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERF-IRAVI 628
+ ++C+ NF++ S+ D++R++ ++ L T + RD IR +
Sbjct: 640 SV---QWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTS---RDYYINIRKAL 693
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQVF-LYSNSVNARESEIPYPWLVFNEKMKVNSVF 687
G + ++ + + G T++D QV L+ ++V + E W+++NE + +
Sbjct: 694 VTGYFMQVAHLERTGH---YLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLTTKNY 746
Query: 688 LKDSTAVSDSVLL 700
++ T + L+
Sbjct: 747 IRTCTDIKPEWLV 759
Score = 387 (141.3 bits), Expect = 6.2e-78, Sum P(2) = 6.2e-78
Identities = 80/195 (41%), Positives = 123/195 (63%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP ++ K+R + ++Q ++ GETG GKTTQ+PQ+ +E + S+ G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGV 188
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RVA E LG+ VGY +R E T L + T G+LLR + D
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+ +I+DE HER + D L+ VLK+++ +R +L++++MSATLDA F YF
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 181 VINIPGFTYPVRTHF 195
++ IPG T+PV +
Sbjct: 309 LLTIPGRTHPVEIFY 323
Score = 42 (19.8 bits), Expect = 9.3e-32, Sum P(2) = 9.3e-32
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 512 NCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAA 543
NC P+LTI + F P ++D EAA
Sbjct: 306 NC--PLLTIPGRTHPVEIFYTPEPERDYLEAA 335
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 473 (171.6 bits), Expect = 6.2e-78, Sum P(2) = 6.2e-78
Identities = 129/433 (29%), Positives = 225/433 (51%)
Query: 279 YICEKERPGAVLVFMTGWDDINSLNDKLQAN-RILGDPTR-VLLLTCHGSMASSEQRLIF 336
++CE+E G +L+F+TG ++I+ +++ LG + ++ + ++ +Q+ IF
Sbjct: 343 HMCEEEE-GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIF 401
Query: 337 DEP----ESGV--RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWI 390
+ P ++G RK+V++TNIAETS+TI+ VVFVID G AK+ Y+ LL + I
Sbjct: 402 EPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAI 461
Query: 391 STVSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGT 449
S S +PG+C+RLY Y + PEILR+ L S+ LQ+K L +
Sbjct: 462 SKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDD 521
Query: 450 IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGA 509
+ F +PE L A+E L + AL+ + +LT LG +A P++P+L KM+I
Sbjct: 522 LVHFDFMDPPAPETL--MRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASC 579
Query: 510 IFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAER 569
+NC VL+I A LSV F+ P + K A+ AK +F+H DHL L+ + +K
Sbjct: 580 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHE 639
Query: 570 GLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERF-IRAVI 628
+ ++C+ NF++ S+ D++R++ ++ L T + RD IR +
Sbjct: 640 SV---QWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTS---RDYYINIRKAL 693
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQVF-LYSNSVNARESEIPYPWLVFNEKMKVNSVF 687
G + ++ + + G T++D QV L+ ++V + E W+++NE + +
Sbjct: 694 VTGYFMQVAHLERTGH---YLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLTTKNY 746
Query: 688 LKDSTAVSDSVLL 700
++ T + L+
Sbjct: 747 IRTCTDIKPEWLV 759
Score = 387 (141.3 bits), Expect = 6.2e-78, Sum P(2) = 6.2e-78
Identities = 80/195 (41%), Positives = 123/195 (63%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP ++ K+R + ++Q ++ GETG GKTTQ+PQ+ +E + S+ G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGV 188
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RVA E LG+ VGY +R E T L + T G+LLR + D
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+ +I+DE HER + D L+ VLK+++ +R +L++++MSATLDA F YF
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 181 VINIPGFTYPVRTHF 195
++ IPG T+PV +
Sbjct: 309 LLTIPGRTHPVEIFY 323
Score = 42 (19.8 bits), Expect = 9.3e-32, Sum P(2) = 9.3e-32
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 512 NCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAA 543
NC P+LTI + F P ++D EAA
Sbjct: 306 NC--PLLTIPGRTHPVEIFYTPEPERDYLEAA 335
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 473 (171.6 bits), Expect = 1.0e-77, Sum P(2) = 1.0e-77
Identities = 129/433 (29%), Positives = 225/433 (51%)
Query: 279 YICEKERPGAVLVFMTGWDDINSLNDKLQAN-RILGDPTR-VLLLTCHGSMASSEQRLIF 336
++CE+E G +L+F+TG ++I+ +++ LG + ++ + ++ +Q+ IF
Sbjct: 310 HMCEEEE-GDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIF 368
Query: 337 DEP----ESGV--RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWI 390
+ P ++G RK+V++TNIAETS+TI+ VVFVID G AK+ Y+ LL + I
Sbjct: 369 EPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAI 428
Query: 391 STVSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGT 449
S S +PG+C+RLY Y + PEILR+ L S+ LQ+K L +
Sbjct: 429 SKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDD 488
Query: 450 IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGA 509
+ F +PE L A+E L + AL+ + +LT LG +A P++P+L KM+I
Sbjct: 489 LVHFDFMDPPAPETL--MRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASC 546
Query: 510 IFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAER 569
+NC VL+I A LSV F+ P + K A+ AK +F+H DHL L+ + +K
Sbjct: 547 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHE 606
Query: 570 GLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERF-IRAVI 628
+ ++C+ NF++ S+ D++R++ ++ L T + RD IR +
Sbjct: 607 SV---QWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTS---RDYYINIRKAL 660
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQVF-LYSNSVNARESEIPYPWLVFNEKMKVNSVF 687
G + ++ + + G T++D QV L+ ++V + E W+++NE + +
Sbjct: 661 VTGYFMQVAHLERTGH---YLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLTTKNY 713
Query: 688 LKDSTAVSDSVLL 700
++ T + L+
Sbjct: 714 IRTCTDIKPEWLV 726
Score = 383 (139.9 bits), Expect = 1.0e-77, Sum P(2) = 1.0e-77
Identities = 79/195 (40%), Positives = 122/195 (62%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP ++ K R + ++Q ++ GETG GKTTQ+PQ+ ++ + S+ G +
Sbjct: 97 ILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDY-MRSLPGPKRGV 155
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RVA E LG+ VGY +R E T L + T G+LLR + D
Sbjct: 156 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 215
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+ +I+DE HER + D L+ VLK+++ +R +L++++MSATLDA F YF
Sbjct: 216 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCP 275
Query: 181 VINIPGFTYPVRTHF 195
++ IPG T+PV +
Sbjct: 276 LLTIPGRTHPVEIFY 290
Score = 42 (19.8 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 512 NCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAA 543
NC P+LTI + F P ++D EAA
Sbjct: 273 NC--PLLTIPGRTHPVEIFYTPEPERDYLEAA 302
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 442 (160.7 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 126/411 (30%), Positives = 209/411 (50%)
Query: 287 GAVLVFMTGWDDINSLNDKL-QANRILGDPTRVLLLT-CHGSMASSEQRLIFDEPESGVR 344
G +L+F+TG D+I + ++ + R LG + L++ + ++ S Q IF+ R
Sbjct: 583 GDILIFLTGQDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQSKIFEPTPENAR 642
Query: 345 KIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXX 404
K+VLATNIAETS+TI+ +V+VID G KE Y+ S L+ S S
Sbjct: 643 KVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGR 702
Query: 405 VQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
V PG+C+RLY + Y + E PEI RT L + LQ+KSL + + F + P
Sbjct: 703 VGPGKCFRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQLKSLGINELLDF--EFMDPPPT 760
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
A+ A+ L + L+H ELT LG+ +A P +P L K ++ C+E VL+IVA
Sbjct: 761 EALIGALNQLFALQGLNHKGELTKLGRQMAEFPTDPMLAKAVLAADKEGCVEEVLSIVAM 820
Query: 524 LSVRDP-FLAPMDKKDLAEAAKSQFS-HDYSDHLALVRAFEGWKDAERGLAGYEYCW--K 579
LS F P DK+ A+AA+ +F+ + DH+ L+ + W D++ Y W +
Sbjct: 821 LSEASALFFRPKDKQVHADAARGRFTVKEGGDHVTLLNIWNQWLDSD-----YSPIWSKE 875
Query: 580 NFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSI 639
NFL S+ +R++ LS L + V+ S C RA+ G +P + +
Sbjct: 876 NFLQQRSLTRARDVREQ-LSKLCER--VEVTLSTCGGISNMPPIKRAITA-GFFPNAARM 931
Query: 640 VQNGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLK 689
++G S +T+++ V+++ +SV +E P +++ E ++ +++
Sbjct: 932 QRSG--DSYRTVKNNTTVYIHPSSVMMQEDPPPR-MVIYYELVQTTKEYMR 979
Score = 425 (154.7 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 86/195 (44%), Positives = 127/195 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M E R++LP Y ++ L A+ Q Q+++I GETG GKTTQ+PQ++ E+ T G +
Sbjct: 366 MQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAGYTK-DGM--RV 422
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV+ RVA E G K+G VGY +R E T L + T G+LLR + +
Sbjct: 423 GCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGMLLREFMTE 482
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L + +++DE HER ++ D LL ++KDL R +L+L++ SAT++AE F+SYF A
Sbjct: 483 PDLSSYSALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASYFDDAP 542
Query: 181 VINIPGFTYPVRTHF 195
+ NIPG YPV ++
Sbjct: 543 IFNIPGRRYPVDIYY 557
Score = 48 (22.0 bits), Expect = 5.5e-38, Sum P(2) = 5.5e-38
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 210 YNQIDDYGQEKM------WKMSKQAPRKRKSQIASAVED 242
Y + D+YGQEK W+ + A K K+QI A D
Sbjct: 280 YVEKDEYGQEKFVTEHEEWEREQAA--KAKAQIKVAERD 316
Score = 44 (20.5 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 205 YRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIAS 238
Y P Q D+ G +K+ K SK K+K +S
Sbjct: 7 YAFLPM-QDDEVGPQKVKKSSKDRRDKKKESSSS 39
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 457 (165.9 bits), Expect = 2.9e-77, Sum P(2) = 2.9e-77
Identities = 92/196 (46%), Positives = 139/196 (70%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LPA++ + +++ AI +QVV+ISGETG GK+TQV QFIL+ ++S + +++CTQ
Sbjct: 574 REKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDHYLSSGEKDLQTVVCTQ 633
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN-- 122
PRRISA+S++ERVA ER +G+ VGY V E ++T L FCTTG+LLRR+
Sbjct: 634 PRRISAISLAERVAFERDTTVGKEVGYSVHGEKSISKETLLEFCTTGLLLRRIQQHGLGF 693
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L ++ V+VDEVHER + D LL +LK ++SR P L+++LMSAT++++ F YFG A +
Sbjct: 694 LSTLSCVVVDEVHERSIENDILLTLLKLVISRIPNLKVILMSATVNSDTFKYYFGNAGHL 753
Query: 183 NIPGFTYPVRTHFLED 198
+I G T+P++ +++ED
Sbjct: 754 HIHGRTFPIKDYYIED 769
Score = 410 (149.4 bits), Expect = 2.9e-77, Sum P(2) = 2.9e-77
Identities = 152/531 (28%), Positives = 240/531 (45%)
Query: 287 GAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKI 346
G++LVF+ G +I ++++ D ++ +L H S+ +SEQR F RKI
Sbjct: 814 GSILVFLPGVSNIARCIREIKSK----DGSKFEVLPLHASLNTSEQRRCFKTYTK--RKI 867
Query: 347 VLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQ 406
+ ATNIAETSITI+DVV VID G+ K+ YD + +W S + V+
Sbjct: 868 ICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQRRGRAGRVK 927
Query: 407 PGECYRLYPRCVYDAFAEYQLP-EILRTPLQSLCLQI-----------KSLRLGTIAGFL 454
G CY+LY R + Q P E+LRT L +CL + S+ G+I F+
Sbjct: 928 KGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVPLVKRFSSAGNSVNQGSIKKFM 987
Query: 455 SRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCL 514
+ + P V A++ L +GAL +E+LT LG+YL LP++ KLGK+L+ G+IF L
Sbjct: 988 NSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLVFGSIFGYL 1047
Query: 515 EPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDA--ERGLA 572
EP LTI A LS + PFL D A +S+ S + D LA R + W + RG+
Sbjct: 1048 EPALTITAILSTKSPFLGD----DEAREIRSKQSQGWGDVLADARVYHNWLEILETRGVK 1103
Query: 573 G-YEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNA---WGRDERF--IRA 626
++C + L +++ I R E L + L++ T W E +
Sbjct: 1104 KTVQWCEEMHLHYTTLQQIRQNRNE---LSEAAQLLELTTKKLTGNFDWYSTENLTVLST 1160
Query: 627 VICYGLYPGISSIVQNGK------SSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEK 680
+I L P + V K S SL+ ++ ++ + + N R P + N
Sbjct: 1161 LIAAALSPNVVKCVYPDKKFVASFSGSLEMEQEARLTKFYDQNNQRLFIHPSSTMFVNSP 1220
Query: 681 MKVNSVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPS----VADMYQC 736
F+ V + L + I+ + ++ G + ++P + D C
Sbjct: 1221 NASRCTFVAYEQKVETTKPFLRNCT----PINTYGMILLGANDILIDPLGKGLILDQAYC 1276
Query: 737 IRRELDELIQNKLLNPRLNIHTHEDLLAAVRLLVAED--QCEGRFIFGHQV 785
I+ +I K+L L+ HE L ++ L + QC I G+ V
Sbjct: 1277 IKAWPKVVILLKMLKRCLDASLHERLESSSGLNYESEIHQCIRTLIAGNGV 1327
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 443 (161.0 bits), Expect = 7.3e-77, Sum P(2) = 7.3e-77
Identities = 123/421 (29%), Positives = 211/421 (50%)
Query: 287 GAVLVFMTGWDDINSLNDKLQANRI--LGDPTRVLLLTCHGSMASSEQRLIFDEPESGVR 344
G +LVFMTG +DI + +L R+ L DP ++ +L + M + Q IFD GVR
Sbjct: 512 GDILVFMTGQEDIE-VTCELVRERLDALNDPPKLSILPIYSQMPADLQAKIFDRAPPGVR 570
Query: 345 KIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXX 404
K ++ATNIAETS+T++ +++V+D G +K Y+ L + IS +
Sbjct: 571 KCIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGRAGR 630
Query: 405 VQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
PG+ +RL+ + D +PEI RT L + L IKSL + + F + P
Sbjct: 631 TGPGKAFRLFTEKAFKDELYIQTIPEIQRTNLSNTILLIKSLGVKDMLDF--DFMDPPPQ 688
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
+ ++ L +GALD+ ++T LG+ + PM+P L K++I+ + C E ++TIV+
Sbjct: 689 DTMTTSLFDLWALGALDNLGDMTDLGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITIVSM 748
Query: 524 LSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLS 583
LSV + F P ++++ ++AA+ +F SDHL + + WK A +C ++FL
Sbjct: 749 LSVPNVFYRPKERQEESDAAREKFFVPESDHLTFLHVYSQWKANGHSDA---WCSRHFLH 805
Query: 584 APSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNG 643
+ S++ +R + L ++K + D C G D +R IC G Y + + G
Sbjct: 806 SKSLRRAKEVRDQLLDIMKTQKM---DIVSC---GTDWDVVRRCICSGYYHQAAKVKGIG 859
Query: 644 KSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFG 703
+ +L+T Q L+ S +P ++V++E + + ++ T+V L G
Sbjct: 860 EYINLRTSVTVQ--LHPTSALYGLGFLP-DYVVYHELILTSKEYMSTVTSVDPMWLADLG 916
Query: 704 G 704
G
Sbjct: 917 G 917
Score = 416 (151.5 bits), Expect = 7.3e-77, Sum P(2) = 7.3e-77
Identities = 90/203 (44%), Positives = 129/203 (63%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R LPA+ + L+ I NQV+I+ GETG GKTTQ+ QF+ E G + I C
Sbjct: 298 EQREFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGY----GQLGMIGC 353
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++AMSV++RV+ E KLG +VGY +R E +DT + + T G+LLR L + +
Sbjct: 354 TQPRRVAAMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGVLLRESLNEPD 413
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L + +I+DE HER +N D L+ + K +L RR +L+L++ SAT++A+ FS +FGGA
Sbjct: 414 LDRYSCIIMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRFSDFFGGAPDF 473
Query: 183 NIPGFTYPVRTHF----LEDILD 201
IPG T+PV F +ED +D
Sbjct: 474 TIPGRTFPVDVMFSRSPVEDYVD 496
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 428 (155.7 bits), Expect = 1.0e-76, Sum P(2) = 1.0e-76
Identities = 126/420 (30%), Positives = 210/420 (50%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLLLTCHGSMASSEQRLIFDEPESG 342
E G +LVF+TG ++I K+Q R G P + L + S+ +Q IFD +
Sbjct: 284 EGTGDILVFLTGEEEIEDTCAKIQRETRERGLPP-MKTLPLYSSLPIYQQSKIFDTCKE- 341
Query: 343 VRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXX 402
RK +++TNIAETS+TI+ +VFV+D G +K+ +Y+ + LL + IS S
Sbjct: 342 -RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRA 400
Query: 403 XXVQPGECYRLYPRCVYDAFAEYQL-PEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSP 461
+PG+C+RLY + Q PEILR+ L S+ LQ+ L+LG + + P
Sbjct: 401 GRTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQL--LKLGVVDLVHFDFMDPP 458
Query: 462 ELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIV 521
+ A+E L +GALD +LT +G ++ P++P+L KMLI+ A +C +LTI
Sbjct: 459 VPDTLIRALEVLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIA 518
Query: 522 AGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNF 581
A LS + F+ P D + A++AK F H DHL ++ + +K + G +C+ NF
Sbjct: 519 AMLSAPNCFMRPKDNRIEADSAKKSFDHFDGDHLTMLNVYHSFK--KNG-EDPTWCYDNF 575
Query: 582 LSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ 641
L+ ++K DS+R + +L L + + + + I+ I G + + +
Sbjct: 576 LNHRAIKQADSVRSQLARILTRFKLPLVSGDVNSKFYYEN--IKKCIAAGFF---MQVAK 630
Query: 642 NGKSSSLKTMEDGQVFLYSNSVN-ARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
K + T+ D Q ++ S R E + ++NE + + +++ T V LL
Sbjct: 631 CEKKNIYFTLGDEQSVIFHPSTGLTRRPE----FCIYNEFVLTSENYIRTITDVKFDWLL 686
Score = 422 (153.6 bits), Expect = 1.0e-76, Sum P(2) = 1.0e-76
Identities = 85/199 (42%), Positives = 131/199 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVR-GAVCS 59
+LE R+ LP +K+K + I +NQVVI+ GETG GKTTQ+PQF++++ + +R G +
Sbjct: 70 ILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGL--IRPGKMVG 127
Query: 60 IICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLV 119
+ TQPRR++A+SV++RV+ E +LGE VGY +R E + T + + T G+LLR +
Sbjct: 128 V--TQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMS 185
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGA 179
D L +I+DE HER ++ D L ++KD+L RR +L+L++MSATL+A F YF A
Sbjct: 186 DPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFENA 245
Query: 180 TVINIPGFTYPVRTHFLED 198
+I +PG +PV + E+
Sbjct: 246 PLIKVPGRLHPVEIFYTEE 264
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 454 (164.9 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 113/339 (33%), Positives = 184/339 (54%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGV 343
ER G VL+F++G ++I S+ + + + + T L+L H A ++Q +FD G+
Sbjct: 371 ER-GDVLIFVSGVNEIESVVEAV--HEYATEQTHWLVLPLHSGQAIADQSKVFDYAPEGM 427
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK +++TNIAETS+T++ V FV+D GK KE ++DA L W+S S
Sbjct: 428 RKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAG 487
Query: 404 XVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
PG C+RLY Y+AF Y PEI R PL ++ LQ+ S+ L + F +++PE
Sbjct: 488 RTGPGVCFRLYTAEQYNAFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAF--PFIEAPET 545
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
++ I LK AL E++T LG+ LA LP+E +GKML++G++F +E +LT+ A
Sbjct: 546 ERIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAM 605
Query: 524 LSVRDPFL--APMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGY-EYCWKN 580
LSV++P A D++ + E + D+ D LVR + W + G ++C +
Sbjct: 606 LSVQNPLTNRAHTDQRCVRE--RESLESDHGDLFTLVRLYNVWVQLKMRRDGTRQWCRRL 663
Query: 581 FLSAPSMKVIDSLRKEFLSLLKDTGLV---DCDTSICNA 616
+ + LR++F +L+ G+V D D+ + +A
Sbjct: 664 GIEEQRFYEVTKLRQQFQRILESCGMVVASDSDSQLTSA 702
Score = 404 (147.3 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 85/194 (43%), Positives = 128/194 (65%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
+RNLP + + L A+ ++VVI++G+TGCGK+TQVPQ++ + R SI CTQ
Sbjct: 143 QRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDF---GYR----SIACTQ 195
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++ +S+ +RVA E + G V +++R E + + T +LF T G+LLR+L V NL
Sbjct: 196 PRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLD 255
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG--GATVI 182
+I+DE+HER + DFLL V K LL RP+L+L+LMSAT++ ELF YFG GA ++
Sbjct: 256 QYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFGEEGARLV 315
Query: 183 NIPGFTYPVRTHFL 196
+PG +P++ +L
Sbjct: 316 QVPGRLFPIKLRYL 329
Score = 47 (21.6 bits), Expect = 5.3e-39, Sum P(2) = 5.3e-39
Identities = 20/87 (22%), Positives = 37/87 (42%)
Query: 213 IDDYGQEKMWKMSKQAPRKRKSQIASAVEDTLK-----AANFNEYSSQTRESLSCWNPDC 267
+DDYG +++ + R + + I E L AAN ++Y + + + N
Sbjct: 213 LDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLDQYDALILDEIHERN--L 270
Query: 268 IGFNLIEYVLCYICEKERPGAVLVFMT 294
G L+ C + + RP L+ M+
Sbjct: 271 FGDFLLGVTKCLL--RARPQLKLILMS 295
>UNIPROTKB|D6RA70 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 PROSITE:PS50088
PROSITE:PS51061 PROSITE:PS51194 SMART:SM00248 SMART:SM00490
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC093208
EMBL:AC010389 HGNC:HGNC:24721 IPI:IPI00964960
ProteinModelPortal:D6RA70 SMR:D6RA70 Ensembl:ENST00000515883
UCSC:uc010jcf.2 HOGENOM:HOG000205632 ArrayExpress:D6RA70
Bgee:D6RA70 Uniprot:D6RA70
Length = 739
Score = 528 (190.9 bits), Expect = 3.3e-76, Sum P(2) = 3.3e-76
Identities = 109/225 (48%), Positives = 150/225 (66%)
Query: 4 FRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICT 63
FR++LP ++++ ++ I +N+VV+I GETG GKTTQ+PQF+L+ + G C I CT
Sbjct: 189 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKN--GIPCRIFCT 246
Query: 64 QPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLV-DRN 122
QPRR++A++V+ERVA+ER E++G+++GY++RLE T L FCT G+LLR L+ D
Sbjct: 247 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDST 306
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L VTHVIVDEVHER DFLL L+DLL + P L+L+L SA LD LF YFG VI
Sbjct: 307 LSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 366
Query: 183 NIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQ 227
I G + V+ FLEDIL TGY ++ Y +EK + +Q
Sbjct: 367 YIQGRPFEVKEMFLEDILRTTGYT---NKEMLKYKKEKQQEEKQQ 408
Score = 297 (109.6 bits), Expect = 3.3e-76, Sum P(2) = 3.3e-76
Identities = 68/160 (42%), Positives = 99/160 (61%)
Query: 241 EDTLKAANFNEYSSQTRESLSCWN----PDCIGFNLIEYVLCYICEKERPGAVLVFMTGW 296
E +L N ++ S++ RE L ++ + + +LI ++L IC GAVL+F+ G+
Sbjct: 573 ESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGY 632
Query: 297 DDINSLNDK-LQANRILGDPT-RVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAE 354
D+I L D+ L ++ D T R + H +M +S+Q+ + P +GVRKI+L+TNIAE
Sbjct: 633 DEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAE 692
Query: 355 TSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVS 394
TSIT+NDVVFVID GK KE S+DALN + L WIS S
Sbjct: 693 TSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKAS 732
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 433 (157.5 bits), Expect = 1.7e-75, Sum P(2) = 1.7e-75
Identities = 91/199 (45%), Positives = 128/199 (64%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITS---VRGAVCSII 61
R++LPA+ +N LLT I NQV I+ GETG GKTTQ+ QF+ E + G I
Sbjct: 355 RKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGANIDKNGEKRIIA 414
Query: 62 CTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RV+ E KLGE VGY +R E + T + + T GILLR +L D
Sbjct: 415 CTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTVIKYMTEGILLREILAD 474
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L + +I+DE HER +N D LL + K+LL++R +L+L++ SAT++A F+ +FG A
Sbjct: 475 PMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVTSATMNANRFTKFFGVAP 534
Query: 181 VINIPGFTYPVRTHFLEDI 199
+IPG T+PV F D+
Sbjct: 535 QFHIPGRTFPVEVFFNRDV 553
Score = 415 (151.1 bits), Expect = 1.7e-75, Sum P(2) = 1.7e-75
Identities = 129/442 (29%), Positives = 212/442 (47%)
Query: 287 GAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRK 345
G +LVFMTG +DI D ++ +L DP + + + +M Q+ IF++ RK
Sbjct: 583 GDILVFMTGQEDIEITCDLIKEKLNLLEDPPPLDIFPIYSTMPQDLQKKIFNKTNLQRRK 642
Query: 346 IVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXV 405
+V+ATNIAETS+T++ + +VIDCG K Y+ L IS +
Sbjct: 643 VVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGRAGRT 702
Query: 406 QPGECYRLYPRCVYDAFAEY--QLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
G YRLY + + Y +PEI R+ L ++ L +KSL++ I F L P
Sbjct: 703 GAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSF--PFLDPPPK 760
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAI--FNCLEPVLTIV 521
+ ++ L IGALD+ ELT LG + P+EP L K+++L F+C E V+TIV
Sbjct: 761 DLLNCSLYDLWAIGALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFHCSEEVVTIV 820
Query: 522 AGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWK-DAERGLAGY----EY 576
A LSV + F P ++ + A+ A+ +F SDHL L+ F W + + Y +
Sbjct: 821 AMLSVPNIFNRPKERANEADMAREKFIISESDHLTLLNVFNQWNINLNKFKGNYTKINNW 880
Query: 577 CWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGI 636
C KNFL S+ ++ + + ++K L +I + D+ IR +C Y
Sbjct: 881 CNKNFLQLKSLYRAKDIKHQLMLIMKKNKL-----AILKSKTDDD--IRKCLCASFYQQS 933
Query: 637 SSIVQ---NGKSSSLKTMEDG-QVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDST 692
+ + + NG+ + ++FL+ S + +S + +++++E + ++ T
Sbjct: 934 AKLTKMNLNGQPEFVNLRHSYMKMFLHPTS-SLLDSNLSTNYVIYHELVLTKKEYMNCVT 992
Query: 693 AVSDSVLLLFGGSISQGEIDGH 714
V D + LL G G D H
Sbjct: 993 TV-DPIWLLEYGYKFFGVADSH 1013
Score = 40 (19.1 bits), Expect = 4.9e-36, Sum P(2) = 4.9e-36
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 744 LIQNKLLNPRLNIHTHEDLLAAVRLLVAE-DQCEGR 778
L++ K+ NP+L + D L V + +A DQ GR
Sbjct: 667 LVKVKVYNPKLGM----DTLQVVPISLANADQRSGR 698
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 439 (159.6 bits), Expect = 1.9e-75, Sum P(2) = 1.9e-75
Identities = 125/419 (29%), Positives = 208/419 (49%)
Query: 286 PGAVLVFMTGWDDINSLNDKL-QANRILGDPTRVLL-LTCHGSMASSEQRLIFDEPESGV 343
PG +LVF+TG ++I ++ + L + ++ LG + L+ L + ++ S Q IF+
Sbjct: 574 PGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDA 633
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK+VLATNIAETS+TI+ + +VID G +K+ S+DA + L IS +
Sbjct: 634 RKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAG 693
Query: 404 XVQPGECYRLYPRCVYDAFAEYQ-LPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
PG+C+RLY Y E Q +PEI RT L ++ L +KSL + + F L P
Sbjct: 694 RTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHF--DFLDPPP 751
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ A+E L +GAL+H ELT LG+ +A P +P + KM+I + C E ++TI A
Sbjct: 752 QETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAA 811
Query: 523 GLSVRDP-FLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNF 581
LS F P + A++A+ F DH+ L+ + W+++ +C +N+
Sbjct: 812 MLSCNAAVFYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESS---FSQRWCVENY 868
Query: 582 LSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ 641
+ +MK +R + + LL+ V+ +T D IR I G + +S +
Sbjct: 869 VQHRTMKRARDVRDQLVGLLER---VEIETKSST----DTIKIRKAITAGYFYNVSKLDN 921
Query: 642 NGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
G ++K + NS E+ P W+V+ E + + F+++ + + LL
Sbjct: 922 TGHYKTVKHKHTTHP--HPNSCLFEET--PR-WVVYFELVFTSKEFMREMSEIESGWLL 975
Score = 407 (148.3 bits), Expect = 1.9e-75, Sum P(2) = 1.9e-75
Identities = 85/195 (43%), Positives = 125/195 (64%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R++LP Y ++ + A+ ++QV+II GETG GKTTQ+PQ++ E+ G I C
Sbjct: 359 ETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCE--GGK-RIGC 415
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++AMSV+ RVA E G KLG VGY +R E T L + T G+LLR L + +
Sbjct: 416 TQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPD 475
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L + +++DE HER ++ D L ++KD+ R +L+L++ SATLDAE FSS+F A +
Sbjct: 476 LASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIF 535
Query: 183 NIPGFTYPVRTHFLE 197
IPG +PV ++ +
Sbjct: 536 RIPGRRFPVDIYYTQ 550
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 439 (159.6 bits), Expect = 1.9e-75, Sum P(2) = 1.9e-75
Identities = 125/419 (29%), Positives = 208/419 (49%)
Query: 286 PGAVLVFMTGWDDINSLNDKL-QANRILGDPTRVLL-LTCHGSMASSEQRLIFDEPESGV 343
PG +LVF+TG ++I ++ + L + ++ LG + L+ L + ++ S Q IF+
Sbjct: 574 PGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDA 633
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK+VLATNIAETS+TI+ + +VID G +K+ S+DA + L IS +
Sbjct: 634 RKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAG 693
Query: 404 XVQPGECYRLYPRCVYDAFAEYQ-LPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
PG+C+RLY Y E Q +PEI RT L ++ L +KSL + + F L P
Sbjct: 694 RTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHF--DFLDPPP 751
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ A+E L +GAL+H ELT LG+ +A P +P + KM+I + C E ++TI A
Sbjct: 752 QETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAA 811
Query: 523 GLSVRDP-FLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNF 581
LS F P + A++A+ F DH+ L+ + W+++ +C +N+
Sbjct: 812 MLSCNAAVFYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESS---FSQRWCVENY 868
Query: 582 LSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ 641
+ +MK +R + + LL+ V+ +T D IR I G + +S +
Sbjct: 869 VQHRTMKRARDVRDQLVGLLER---VEIETKSST----DTIKIRKAITAGYFYNVSKLDN 921
Query: 642 NGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
G ++K + NS E+ P W+V+ E + + F+++ + + LL
Sbjct: 922 TGHYKTVKHKHTTHP--HPNSCLFEET--PR-WVVYFELVFTSKEFMREMSEIESGWLL 975
Score = 407 (148.3 bits), Expect = 1.9e-75, Sum P(2) = 1.9e-75
Identities = 85/195 (43%), Positives = 125/195 (64%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R++LP Y ++ + A+ ++QV+II GETG GKTTQ+PQ++ E+ G I C
Sbjct: 359 ETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCE--GGK-RIGC 415
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++AMSV+ RVA E G KLG VGY +R E T L + T G+LLR L + +
Sbjct: 416 TQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPD 475
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L + +++DE HER ++ D L ++KD+ R +L+L++ SATLDAE FSS+F A +
Sbjct: 476 LASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIF 535
Query: 183 NIPGFTYPVRTHFLE 197
IPG +PV ++ +
Sbjct: 536 RIPGRRFPVDIYYTQ 550
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 439 (159.6 bits), Expect = 2.1e-75, Sum P(2) = 2.1e-75
Identities = 117/328 (35%), Positives = 178/328 (54%)
Query: 283 KERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESG 342
+E G +L+F++G +I + L+ + P +L + + SEQ IF +P G
Sbjct: 287 RENTGDILIFLSGEREIRDTAESLRKHH----PADCEVLPLYSRLTVSEQEKIF-KPH-G 340
Query: 343 VRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXX 402
R+IVLATN+AETS+T+ + VID G A+ + Y + L IS S
Sbjct: 341 RRRIVLATNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRC 400
Query: 403 XXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V PG C RLY + E+ PEILRT L ++ LQ+K+L LG I F ++ P+
Sbjct: 401 GRVGPGVCIRLYSEQDFLNRPEFTDPEILRTNLAAVILQMKALNLGDIRVF--PFVEPPD 458
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
V++ + L+ I ALD LT LG+ LA LP++P+LG++L+ GA NCL V IVA
Sbjct: 459 ERLVRDGLRTLQEINALDAQGRLTELGRRLARLPVDPRLGRILLAGAEENCLSEVCIIVA 518
Query: 523 GLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGY---EYCWK 579
LSV DP P DK A+ ++F H SD +A++ + +++ + L+G +YC
Sbjct: 519 ALSVPDPRERPADKAQAADQKHARFRHPDSDFMAILALWNDYEEQRQHLSGSKLRQYCRD 578
Query: 580 NFLSAPSMKVIDSLRKEFLSLLK-DTGL 606
NFLSA M+ + ++ L ++K + GL
Sbjct: 579 NFLSALRMREWRDIHQQILEVVKGELGL 606
Score = 411 (149.7 bits), Expect = 2.1e-75, Sum P(2) = 2.1e-75
Identities = 93/194 (47%), Positives = 118/194 (60%)
Query: 2 LEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSII 61
LE+ LP + + + AI QNQVVI+ GETG GKTTQ+P+ LE+ RG I
Sbjct: 68 LEYPEELPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAG----RGIQGYIG 123
Query: 62 CTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDR 121
TQPRRI+A SV+ R+A E LGE+VGYKVR D+ + T GILL DR
Sbjct: 124 HTQPRRIAARSVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDR 183
Query: 122 NLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATV 181
L +IVDE HER +N DFLL LK LL RR +L+LV+ SAT+D E FS +F A +
Sbjct: 184 FLDQYDTLIVDEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRHFDNAPI 243
Query: 182 INIPGFTYPVRTHF 195
+ +PG TYPV +
Sbjct: 244 VRVPGRTYPVEIRY 257
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 436 (158.5 bits), Expect = 2.1e-75, Sum P(2) = 2.1e-75
Identities = 131/496 (26%), Positives = 239/496 (48%)
Query: 221 MWKMSKQAPRKR---KSQIASAVEDTLK-AANFNE---YSSQTR----ESLSCWNPDCIG 269
++ + K+A R+R K + SA D K +A FNE ++ R E L +P+
Sbjct: 674 LFALLKKATRRRPDLKIIVTSATLDADKFSAYFNECPIFTIPGRTFPVEILYSKDPESDY 733
Query: 270 FNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKL-QANRILGDPT-RVLLLTCHGSM 327
+ + I E PG +L+F+TG ++I++ + L + + LG +++L + ++
Sbjct: 734 LDAALTTVMQIHIDEPPGDILLFLTGQEEIDTSCEILFERMKALGPSVPELIILPVYSAL 793
Query: 328 ASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLP 387
+ Q IFD G RK+V+ATNIAETSITI+ + +V+D G K+ +YD L+
Sbjct: 794 PNEMQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVV 853
Query: 388 SWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLR 446
+ IS PG+C+RLY Y +PEI R L + L +K++
Sbjct: 854 TPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQTEMLPTSIPEIQRQNLSNTILLLKAMG 913
Query: 447 LGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLI 506
+ + F + P + + A+E L + ALD LT LG+ +A PMEP L K+LI
Sbjct: 914 INDLLHF--DFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLSKVLI 971
Query: 507 LGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKD 566
C + +L+IVA L++ + F P +K+ A+A K++F DHL L+ + WK
Sbjct: 972 ASVEMRCSDEMLSIVAMLNLPNVFYRPKEKQTQADAKKAKFHDPNGDHLTLLNVYNAWKQ 1031
Query: 567 AERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRA 626
+ +C +NF+ ++ +R + +++ C G D +R
Sbjct: 1032 SRYSKP---WCAENFIQFRALTRARDVRNQIERIMQR---FKYQVMSC---GSDTNRVRQ 1082
Query: 627 VICYGLYPGISSIVQNGKSSSLKTMEDGQ-VFLY-SNSVNARESEIPYPWLVFNEKMKVN 684
+C G + + + + +T+ +G V+L+ S+++ + +E W++++ +
Sbjct: 1083 ALCSGFF---RNAARKDQQEGYRTLIEGTPVYLHPSSALFGKHAE----WVIYHTLVLTT 1135
Query: 685 SVFLKDSTAVSDSVLL 700
++ +T++ L+
Sbjct: 1136 KEYMHCTTSIEPKWLV 1151
Score = 413 (150.4 bits), Expect = 2.1e-75, Sum P(2) = 2.1e-75
Identities = 80/194 (41%), Positives = 128/194 (65%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R +LP + + +L+ A+ +NQ++I+ GETG GKTTQ+ Q++ E+ + G + CTQ
Sbjct: 539 RESLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAEAGFAN-EGVIG---CTQ 594
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++AMSV++RV+ E G +LG+ VGY +R E TR+ + T G+L R +++D +LK
Sbjct: 595 PRRVAAMSVAKRVSEEVGCELGQEVGYTIRFEDCTSPATRIKYMTDGMLQREIVIDPDLK 654
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+ +++DE HER + D L +LK RRP+L++++ SATLDA+ FS+YF + I
Sbjct: 655 RYSVIMLDEAHERTIATDVLFALLKKATRRRPDLKIIVTSATLDADKFSAYFNECPIFTI 714
Query: 185 PGFTYPVRTHFLED 198
PG T+PV + +D
Sbjct: 715 PGRTFPVEILYSKD 728
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 431 (156.8 bits), Expect = 7.5e-75, Sum P(2) = 7.5e-75
Identities = 90/190 (47%), Positives = 130/190 (68%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
+ LP ++ +++LL+ I +NQVV+I GETG GKTTQ+ Q++ E + RG SI+ TQ
Sbjct: 347 KEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGK--SIVVTQ 404
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRD-TRLLFCTTGILLRRLLVDRNL 123
PRR++A+SV++RVA E LG+ VGY +R E + + T+L F T GILLR L+D L
Sbjct: 405 PRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTL 464
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVIN 183
+ VI+DE HER +N D LL K LL+RR +L+L++ SAT++A+ FS++FG A
Sbjct: 465 DKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFT 524
Query: 184 IPGFTYPVRT 193
IPG T+PV+T
Sbjct: 525 IPGRTFPVQT 534
Score = 411 (149.7 bits), Expect = 7.5e-75, Sum P(2) = 7.5e-75
Identities = 126/433 (29%), Positives = 214/433 (49%)
Query: 287 GAVLVFMTGWDDINSLNDKLQA------NRILG-----DPTRVLLLTCHGSMASSEQRLI 335
G +L+FMTG +DI + D LQ ++ G + + +L + ++ + Q I
Sbjct: 564 GDILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKI 623
Query: 336 FDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSX 395
F + RKI++ATNIAETS+TI + +VIDCG +K Y+ L+ + IS +
Sbjct: 624 FQDLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANA 683
Query: 396 XXXXXXXXXVQPGECYRLYPRCVY--DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGF 453
PG YRLY + D + + +PEI RT L + L +KSL +
Sbjct: 684 DQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQ-TIPEIQRTNLSNTLLLLKSL---DVTDE 739
Query: 454 LSRA--LQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIF 511
LS+ + P L +++ L IGA+D + +LT LG +A P++P L K+L++
Sbjct: 740 LSKFPFIDKPPLQTFLSSLYELWFIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRN 799
Query: 512 NCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGL 571
C + +LTIV+ LSV F P +++ A+ A+++F SDHL L+ FE W+
Sbjct: 800 GCSDEMLTIVSMLSVPQVFYRPKERQKEADIARNKFFIAKSDHLTLLNVFEQWR--ANNF 857
Query: 572 AGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYG 631
+ + +C K+F+ S+ +R + L++LK + + ++ G+D I+ IC G
Sbjct: 858 SSH-WCNKHFVQYKSLVRARDIRDQLLTILKSQKI-----PVISS-GKDWDIIKKCICSG 910
Query: 632 LYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDS 691
+ I LKT Q L+ S ++P P++V++E + + ++
Sbjct: 911 FAHQAAKITGLRNYVHLKTGVSVQ--LHPTSALHGLGDLP-PYVVYHELLMTSKEYICCV 967
Query: 692 TAVSDSVLLLFGG 704
T+V L+ +GG
Sbjct: 968 TSVDPFWLMEYGG 980
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 440 (159.9 bits), Expect = 2.5e-74, Sum P(2) = 2.5e-74
Identities = 125/426 (29%), Positives = 218/426 (51%)
Query: 279 YICEKERPGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVL-LLTCHGSMASSEQRLIF 336
++CE E G +L+F+TG ++I +++ LG L + + ++ + Q+ IF
Sbjct: 276 HMCE-EIEGDILMFLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIF 334
Query: 337 DE---PES-GV--RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWI 390
+ P + G RK+V++TNIAETS+TI+ VVFVID G AK+ Y+ LL S I
Sbjct: 335 EPAPPPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPI 394
Query: 391 STVSXXXXXXXXXXVQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGT 449
S S +PG+C+RLY + + + PEILR+ L ++ LQ+K L +
Sbjct: 395 SKASAQQRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDD 454
Query: 450 IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGA 509
+ F +PE L A+E L + ALD + LT LG ++ P++P+L KMLI
Sbjct: 455 LVHFDFMDPPAPETL--MRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASC 512
Query: 510 IFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAER 569
NC +L+I A LSV F+ P + K A+ AK +F+H DHL L+ + +K +
Sbjct: 513 QHNCSNEILSITAMLSVPQCFVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSE 572
Query: 570 GLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERF-IRAVI 628
+C++NF++ S+K D++R++ ++ L T + +D IR +
Sbjct: 573 DP---NWCYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTS---KDYYVNIRKAL 626
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFL 688
G + ++ + + G ++K ++ Q L+ ++ + + W+++NE + ++
Sbjct: 627 VQGFFMQVAHLERTGYYLTIKDNQNVQ--LHPSTCLDHKPD----WVIYNEFVLTTKNYI 680
Query: 689 KDSTAV 694
+ T V
Sbjct: 681 RTVTDV 686
Score = 386 (140.9 bits), Expect = 2.5e-74, Sum P(2) = 2.5e-74
Identities = 78/188 (41%), Positives = 119/188 (63%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP ++ + + +S +Q +++ GETG GKTTQ+PQ+ ++ ++ R V CTQPRR
Sbjct: 72 LPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKGVS---CTQPRR 128
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVT 127
++AMSV++RV+ E KLGE VGY +R E T L + T G+LLR + D L
Sbjct: 129 VAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPMLDQYQ 188
Query: 128 HVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPGF 187
+++DE HER + D L+ VLK+++ +R +L+LV+MSATLDA F YF A ++ +PG
Sbjct: 189 VILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGR 248
Query: 188 TYPVRTHF 195
T+PV +
Sbjct: 249 THPVEIFY 256
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 454 (164.9 bits), Expect = 1.1e-73, Sum P(2) = 1.1e-73
Identities = 120/441 (27%), Positives = 224/441 (50%)
Query: 265 PDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKL-QANRILGDP--TRVL-L 320
PD I + +E V+ I + E G +L F+TG +++ ++ L + R LG R L +
Sbjct: 255 PDYIK-STVETVM-KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGQTGMKRHLRI 312
Query: 321 LTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALN 380
L + + S EQ +F+ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRT 372
Query: 381 NTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCL 440
CL+ +S S + G+CYRLY +D + +PE+ R+ L + L
Sbjct: 373 AIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDQLPQSTVPEMQRSNLAPVIL 432
Query: 441 QIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTV-LGQYLAMLPMEP 499
Q+K+L + + F + P ++ A+E L +G LD + LT LG +A P+ P
Sbjct: 433 QLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNP 490
Query: 500 KLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVR 559
KML+ F C + +L+I A + +++ F+ P ++K A A +F+ + DHL ++
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQNVFVVPSNQKSQAIRAHRKFAVEEGDHLTMLN 550
Query: 560 AFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGR 619
+E + + ++C ++FL+ + ++R++ LL V ++ G
Sbjct: 551 VYEAFIKHNKNS---QWCQEHFLNYKGLVRAATVREQLKKLL-----VKFQVPKKSSEGD 602
Query: 620 DERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNE 679
+ +R ++ G + + G +++ +D ++ ++ SV E P W+++NE
Sbjct: 603 PDPVLRCIVS-GFFANAARFHSTGAYRTIR--DDHELHIHPASVLYAEK--PPRWVIYNE 657
Query: 680 KMKVNSVFLKDSTAVSDSVLL 700
++ + +++D TA+ + LL
Sbjct: 658 VIQTSKYYMRDVTAIESAWLL 678
Score = 362 (132.5 bits), Expect = 1.1e-73, Sum P(2) = 1.1e-73
Identities = 80/204 (39%), Positives = 123/204 (60%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R+ LP +K +N +L I Q V+I GETGCGK+TQ+PQ++ E+ T+ G V + TQ
Sbjct: 51 RQKLPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLVDRNL 123
PRR++A++V+ RVA ERG LG VGY +R + TR+ F T G+L+R ++VD L
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDPLL 167
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG----- 178
+ +++DE HER + D + +LK + +R +LRL++ SATLDAE F +F
Sbjct: 168 TKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNHNDTSD 227
Query: 179 -----ATVINIPGFTYPVRTHFLE 197
++ + G T+PV +L+
Sbjct: 228 PTRDTCVILTVEGRTFPVDIFYLQ 251
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 446 (162.1 bits), Expect = 2.2e-73, Sum P(2) = 2.2e-73
Identities = 129/429 (30%), Positives = 217/429 (50%)
Query: 283 KERPGAVLVFMTGWDDINSLNDKLQAN-RILG-DPTRVLLLTCHGSMASSEQRLIFD--- 337
+E G +L+F+TG ++I ++ + LG D + + + ++ + Q+ IF+
Sbjct: 290 EEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAP 349
Query: 338 --EPESGV-RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVS 394
P + RK V++TNIAETS+TI+ VVFVID G +K+ Y+ LL IS S
Sbjct: 350 PNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKAS 409
Query: 395 XXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQL-PEILRTPLQSLCLQIKSLRLGTIAGF 453
+PG+C+RLY Y + + Q PEILR+ L S+ LQ+K L + F
Sbjct: 410 AMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHF 469
Query: 454 LSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNC 513
+PE L A+E L + A++ + ELT LG +A P++P+L KMLI NC
Sbjct: 470 DFMDPPAPETL--MRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNC 527
Query: 514 LEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAG 573
+L+I A LSV ++ P + + A+ AK++F+H DHL L+ + +K +
Sbjct: 528 SNEILSITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDP-- 585
Query: 574 YEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERF-IRAVICYGL 632
++C+ NF++ +MK D++R + ++ L T + RD IR + G
Sbjct: 586 -QWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKS---RDYYLNIRKALVAGF 641
Query: 633 YPGISSIVQNGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDS 691
+ ++ + ++G T++D Q V L+ ++V + E W ++NE + F++
Sbjct: 642 FMQVAHLERSGH---YVTVKDNQLVNLHPSTVLDHKPE----WALYNEFVLTTKNFIRTV 694
Query: 692 TAVSDSVLL 700
T V LL
Sbjct: 695 TDVRPEWLL 703
Score = 371 (135.7 bits), Expect = 2.2e-73, Sum P(2) = 2.2e-73
Identities = 77/197 (39%), Positives = 116/197 (58%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQ----FILESEITSVRGAVC 58
E R LP ++ K + + + NQ + + GETG GKTTQ+PQ F+ + + G
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 59 SIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLL 118
+ CTQPRR++AMSV+ RVA E LG+ VGY +R E T L +CT G+LLR +
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAM 190
Query: 119 VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG 178
L +I+DE HER + D L+ ++K+++ R ++++V+MSATLDA F YF
Sbjct: 191 NSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFED 250
Query: 179 ATVINIPGFTYPVRTHF 195
++++PG T+PV F
Sbjct: 251 CPLLSVPGRTFPVEIFF 267
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 446 (162.1 bits), Expect = 2.2e-73, Sum P(2) = 2.2e-73
Identities = 129/429 (30%), Positives = 217/429 (50%)
Query: 283 KERPGAVLVFMTGWDDINSLNDKLQAN-RILG-DPTRVLLLTCHGSMASSEQRLIFD--- 337
+E G +L+F+TG ++I ++ + LG D + + + ++ + Q+ IF+
Sbjct: 290 EEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAP 349
Query: 338 --EPESGV-RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVS 394
P + RK V++TNIAETS+TI+ VVFVID G +K+ Y+ LL IS S
Sbjct: 350 PNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKAS 409
Query: 395 XXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQL-PEILRTPLQSLCLQIKSLRLGTIAGF 453
+PG+C+RLY Y + + Q PEILR+ L S+ LQ+K L + F
Sbjct: 410 AMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHF 469
Query: 454 LSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNC 513
+PE L A+E L + A++ + ELT LG +A P++P+L KMLI NC
Sbjct: 470 DFMDPPAPETL--MRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNC 527
Query: 514 LEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAG 573
+L+I A LSV ++ P + + A+ AK++F+H DHL L+ + +K +
Sbjct: 528 SNEILSITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDP-- 585
Query: 574 YEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERF-IRAVICYGL 632
++C+ NF++ +MK D++R + ++ L T + RD IR + G
Sbjct: 586 -QWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKS---RDYYLNIRKALVAGF 641
Query: 633 YPGISSIVQNGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDS 691
+ ++ + ++G T++D Q V L+ ++V + E W ++NE + F++
Sbjct: 642 FMQVAHLERSGH---YVTVKDNQLVNLHPSTVLDHKPE----WALYNEFVLTTKNFIRTV 694
Query: 692 TAVSDSVLL 700
T V LL
Sbjct: 695 TDVRPEWLL 703
Score = 371 (135.7 bits), Expect = 2.2e-73, Sum P(2) = 2.2e-73
Identities = 77/197 (39%), Positives = 116/197 (58%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQ----FILESEITSVRGAVC 58
E R LP ++ K + + + NQ + + GETG GKTTQ+PQ F+ + + G
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 59 SIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLL 118
+ CTQPRR++AMSV+ RVA E LG+ VGY +R E T L +CT G+LLR +
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAM 190
Query: 119 VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG 178
L +I+DE HER + D L+ ++K+++ R ++++V+MSATLDA F YF
Sbjct: 191 NSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFED 250
Query: 179 ATVINIPGFTYPVRTHF 195
++++PG T+PV F
Sbjct: 251 CPLLSVPGRTFPVEIFF 267
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 414 (150.8 bits), Expect = 2.3e-73, Sum P(2) = 2.3e-73
Identities = 81/195 (41%), Positives = 123/195 (63%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ RRNLP ++ + L + Q+++ GETG GKTTQ+PQ++L E+ + + +
Sbjct: 100 ILKTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKKM--V 157
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RVA E +LG+ VGY +R E T L + T G LLR + D
Sbjct: 158 ACTQPRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKYMTDGQLLRETIHD 217
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
N+ + +I+DE HER + D L+ +LK L RR +L++++MSATLDA F YF A
Sbjct: 218 PNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATLDAAKFQRYFFEAP 277
Query: 181 VINIPGFTYPVRTHF 195
++ +PG T+PV +
Sbjct: 278 ILAVPGRTHPVEIFY 292
Score = 408 (148.7 bits), Expect = 2.3e-73, Sum P(2) = 2.3e-73
Identities = 121/435 (27%), Positives = 217/435 (49%)
Query: 284 ERPGAVLVFMTGWDDINSLNDK--LQANRILGD----PTRVLLLTCHGSMASSEQRLIFD 337
E G +L+F+TG ++I + K L+ + ++ D P V L +G++ +Q+ IF+
Sbjct: 315 EAEGDILLFLTGEEEIEDVCRKVRLEVDELIRDADCGPMEVYPL--YGTLPPQQQQKIFN 372
Query: 338 E--P--ESGVR---KIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWI 390
P + G R K ++ATNIAETS+TI+ +V+V+D G +K+ Y+A LL + I
Sbjct: 373 AAPPPLKKGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPI 432
Query: 391 STVSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGT 449
S S +PG+C+RLY + E PEILR+ L + L++K L +
Sbjct: 433 SRASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLSNTILELKKLGVDD 492
Query: 450 IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGA 509
+ F +PE + A+E L + L+ + +LT LG + P++P L ML+
Sbjct: 493 LVHFDFMDPPAPETM--MRALEELNYLSCLNDDGDLTDLGHMASEYPLDPALAVMLVSSP 550
Query: 510 IFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWK-DAE 568
F C +L++ + LSV F+ P + + A+ K F H DHL L+ A+ +K +
Sbjct: 551 EFYCSNEMLSVTSLLSVPQVFMRPANNRKRADEMKEHFKHMEGDHLTLLNAYHAFKSEMA 610
Query: 569 RGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLK--DTGLVDCDTSICNAWGRDERFIRA 626
+G ++C ++FLS + D++R + +++ D LV + N + IR
Sbjct: 611 KGTDMKKWCHEHFLSYRHLSSADNVRAQLKGIMERQDLELVSTPFTDKNYYTN----IRR 666
Query: 627 VICYGLYPGISSIVQNGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNS 685
+ G + ++ +GK T++D Q V L+ +SV + Y W++++E + +
Sbjct: 667 CLVAGFFMQVALRETSGKV--YHTIKDNQNVMLHPSSVLTTD----YEWVLYHEFVLTSK 720
Query: 686 VFLKDSTAVSDSVLL 700
+++ T + L+
Sbjct: 721 QYIRTVTGIRPEWLI 735
Score = 39 (18.8 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 730 VADMYQCIRRELDELIQNKLLNP 752
+ D+ + +R E+DELI++ P
Sbjct: 330 IEDVCRKVRLEVDELIRDADCGP 352
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 423 (154.0 bits), Expect = 7.0e-73, Sum P(2) = 7.0e-73
Identities = 86/191 (45%), Positives = 126/191 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+LE R+ LP + + LLT I N +VI+ GETG GKTTQ+ Q++ E T G +
Sbjct: 64 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDY-GMIG-- 120
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RV+ E G LGE VGY +R E T + + T GILLR L +
Sbjct: 121 -CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLRE 179
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L + +I+DE HER +N D L +L+++++RR +L+L++ SAT+DAE F+S+FG
Sbjct: 180 ADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVP 239
Query: 181 VINIPGFTYPV 191
+ +IPG T+PV
Sbjct: 240 IFHIPGRTFPV 250
Score = 393 (143.4 bits), Expect = 7.0e-73, Sum P(2) = 7.0e-73
Identities = 117/421 (27%), Positives = 202/421 (47%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVR 344
PG +L+FM G +DI +D++ + L + + +L + + S Q IF + GVR
Sbjct: 279 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 338
Query: 345 KIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXX 404
K ++ATNIAETS+T++ ++FVID G K ++ L IS +
Sbjct: 339 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 398
Query: 405 VQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
PG+C+RLY + Y + +PEI RT L ++ L +KSL + + F + P
Sbjct: 399 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPE 456
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
+ N++ L I+GALD+ LT G+ + P++P L KMLI+ C +L IV+
Sbjct: 457 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 516
Query: 524 LSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLS 583
LSV F P +++ ++ + +F+ SDHL + + WK+ +C +F+
Sbjct: 517 LSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTI---WCNDHFIH 573
Query: 584 APSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNG 643
A +M+ + +R + LKD +V S+ + G D +R IC + + + G
Sbjct: 574 AKAMRKVREVRAQ----LKDI-MVQQRMSLASC-GTDWDIVRKCICAAYFHQAAKLKGIG 627
Query: 644 KSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLF 702
+ +++T G L+ S P ++V++E + +++ TAV L
Sbjct: 628 EYVNIRT---GMPCHLHPTSSLFGMGYTP-DYIVYHELVMTTKEYMQCVTAVDGEWLAEL 683
Query: 703 G 703
G
Sbjct: 684 G 684
Score = 41 (19.5 bits), Expect = 7.5e-36, Sum P(2) = 7.5e-36
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 225 SKQAPRKRKSQIASAVEDTLKAA 247
S+Q R+R + ASA+E+ + A
Sbjct: 696 SRQENRRRAKEEASAMEEEMALA 718
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 448 (162.8 bits), Expect = 1.0e-72, Sum P(2) = 1.0e-72
Identities = 117/441 (26%), Positives = 222/441 (50%)
Query: 265 PDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKL--QANRI--LGDPTRVLL 320
PD I + +E V+ I + E G +L F+TG +++ ++ L QA + G + +
Sbjct: 255 PDYIK-STVETVM-KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRV 312
Query: 321 LTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALN 380
L + + S EQ +F+ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRT 372
Query: 381 NTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCL 440
CL+ +S S + G+CYRLY +D + +PE+ R+ L + L
Sbjct: 373 AIECLVVVPVSQASANQRAGRAGRSRSGKCYRLYTEDAFDQLPQSTVPEMQRSNLAPVIL 432
Query: 441 QIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTV-LGQYLAMLPMEP 499
Q+K+L + + F + P ++ A+E L +G LD + LT LG +A P+ P
Sbjct: 433 QLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNP 490
Query: 500 KLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVR 559
KML+ F C + +L+I A + +++ F+ P ++K A +F+ + DHL ++
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPSNQKSQAIRVHRKFAVEEGDHLTMLN 550
Query: 560 AFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGR 619
+E + + ++C ++FL+ + ++R++ LL V ++ G
Sbjct: 551 VYEAFIKHNKNS---QWCQEHFLNYKGLVRAATVREQLKKLL-----VKFQVPKKSSEGD 602
Query: 620 DERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNE 679
+ +R ++ G + + G +++ +D ++ ++ SV E P W+++NE
Sbjct: 603 PDPVLRCIVS-GFFANAARFHSTGVYRTIR--DDHELHIHPASVLYAEK--PPRWVIYNE 657
Query: 680 KMKVNSVFLKDSTAVSDSVLL 700
++ + +++D TA+ + LL
Sbjct: 658 VIQTSKYYMRDVTAIESAWLL 678
Score = 361 (132.1 bits), Expect = 1.0e-72, Sum P(2) = 1.0e-72
Identities = 80/204 (39%), Positives = 123/204 (60%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R+ LP +K +N +L I Q V+I GETGCGK+TQ+PQ++ E+ T+ G V + TQ
Sbjct: 51 RQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLVDRNL 123
PRR++A++V+ RVA ERG LG VGY +R + TR+ F T G+L+R ++VD L
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLL 167
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG----- 178
+ +++DE HER + D + +LK + +R +LRL++ SATLDAE F +F
Sbjct: 168 TKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTSD 227
Query: 179 -----ATVINIPGFTYPVRTHFLE 197
++ + G T+PV +L+
Sbjct: 228 PPRDTCVILTVEGRTFPVDIFYLQ 251
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 445 (161.7 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 125/441 (28%), Positives = 221/441 (50%)
Query: 265 PDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKLQAN-RIL---GDPTRVLL 320
PD + +E VL I E E G VL F+TG +++ + LQ R L G + +
Sbjct: 245 PDYVKAT-VETVL-KIHETEDDGDVLAFLTGQEEVEKVVSLLQEQARTLSRYGMKKHLCV 302
Query: 321 LTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALN 380
L + + +EQ +F+ VRK+V+ATNIAETSITIN VVFVIDC K +Y+
Sbjct: 303 LPMYAGLPYNEQMRVFERMAPTVRKVVVATNIAETSITINGVVFVIDCAFVKIRAYNPRT 362
Query: 381 NTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCL 440
L+ + IS S + G+C+RLY ++ E +PE+ R+ L + L
Sbjct: 363 AIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTEEDFEKLPESTVPEMQRSNLAPVIL 422
Query: 441 QIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELT-VLGQYLAMLPMEP 499
Q+K+L + + F L P ++ A+E L +G LD LT +G +A P+ P
Sbjct: 423 QLKALGIDNVLRF--SFLSPPPAQSMVQALELLFALGGLDQYGRLTDPMGVRMAEFPLSP 480
Query: 500 KLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVR 559
KML+ F C + ++TI A + +++ F+AP +++ A +F+ DHL ++
Sbjct: 481 MFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVAPHNQRKSAAREHRKFAVAEGDHLTMLN 540
Query: 560 AFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGR 619
+E + ++ ++C +FL+ + ++R++ LL + + G
Sbjct: 541 VYEAFIKHQKSS---QWCQDHFLNYKGLLRATAVREQLRHLLNKFKVPRTSSE-----GD 592
Query: 620 DERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNE 679
+ +R ++ G + + + +G +L+ +D +++++ +SV E P W+VFNE
Sbjct: 593 PDVILRCIVS-GFFANAARMHHSGSYRTLR--DDRELYIHPDSVLYGEK--PPKWVVFNE 647
Query: 680 KMKVNSVFLKDSTAVSDSVLL 700
++ + +++D TAV S L+
Sbjct: 648 VVQTSKYYMRDVTAVESSWLV 668
Score = 362 (132.5 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 81/198 (40%), Positives = 122/198 (61%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R+ LP +K +N +L + Q V+I GETG GK+TQ+PQ++LE+ + G V + TQ
Sbjct: 41 RQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAG-WAAEGKVIGV--TQ 97
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKG-RDTRLLFCTTGILLRRLLVDRNL 123
PRR++A SV+ RVA ERG LG VGY +R + TR+ F T G+L+R ++ D L
Sbjct: 98 PRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPLL 157
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYF-----GG 178
K + +I+DE HER + D + +LK +L +R +LRL++ SATLDA+ F +F G
Sbjct: 158 KKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDAKKFQDFFNLNESGD 217
Query: 179 AT-----VINIPGFTYPV 191
A+ ++ + G T+PV
Sbjct: 218 ASKDTCGILTVEGRTFPV 235
Score = 40 (19.1 bits), Expect = 4.1e-29, Sum P(2) = 4.1e-29
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 189 YPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVEDT 243
Y ++ H +L M Y PYN E+M + AP RK +A+ + +T
Sbjct: 294 YGMKKHLC--VLPM--YAGLPYN-------EQMRVFERMAPTVRKVVVATNIAET 337
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 440 (159.9 bits), Expect = 1.2e-72, Sum P(2) = 1.2e-72
Identities = 114/418 (27%), Positives = 214/418 (51%)
Query: 283 KERPGA--VLVFMTGWDDINSLNDKLQ--ANRILGDPTRVLLLTCHGSMASSEQRLIFDE 338
+E P + +LVF+TG ++I +++ + A + +L+L + S+ ++Q +F
Sbjct: 290 QEAPSSHDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQR 349
Query: 339 PESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXX 398
G RK++++TNIAETSITI + +V+D G K Y+ + L +S
Sbjct: 350 APKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 409
Query: 399 XXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRAL 458
G CYRLY ++ F + +PEI R L S+ LQ+ ++++ + F +
Sbjct: 410 TGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMSK 469
Query: 459 QSPELLAVQNAIEYLKIIGALDHNE---ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLE 515
SP+ +Q AI L+++GAL+H + LT +G+ +A P+EPK K ++L F+C E
Sbjct: 470 PSPD--HIQAAIAQLELLGALEHRDGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTE 527
Query: 516 PVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYE 575
+LTIVA LSV P ++D ++ + +F DHL L+ + +K+ G E
Sbjct: 528 EILTIVALLSVDSILYNPPSRRDEVQSVRKKFVSSEGDHLTLLNVYRTFKNT--G-GNKE 584
Query: 576 YCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPG 635
+C +NF+++ +M ++ +R + L+D + I ++ G D IR + + L+
Sbjct: 585 WCKENFVNSKNMMLVAEVRAQ----LRDI-CIKMSMPIVSSRG-DTESIRRCLAHSLFTS 638
Query: 636 ISSIVQNGKSSSLKTMEDGQVFLYSNSV--NARESEIPYPWLVFNEKMKVNSVFLKDS 691
+ + +G ++ T + V ++ +SV + + + + Y L+F K + + + D+
Sbjct: 639 TAELQPDGSYATTDTHQP--VAIHPSSVLFHCKPACVVYTELLFTSKCYMRDLCVVDA 694
Score = 369 (135.0 bits), Expect = 1.2e-72, Sum P(2) = 1.2e-72
Identities = 78/196 (39%), Positives = 125/196 (63%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
RRNLP ++ + +LL + ++ GETG GKTTQ+PQ++ E I R A+ ++ TQ
Sbjct: 78 RRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIG--RQAIIAV--TQ 133
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++A+S++ RV+ E+ +LG+ VGY VR + + DT++ F T G+LLR + D L+
Sbjct: 134 PRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDCLLR 193
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPEL-----RLVLMSATLDAELFSSYFGGA 179
+ +I+DE HER ++ D L V+K RR EL ++++MSAT+D +LFS YF GA
Sbjct: 194 KYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVDLFSQYFNGA 253
Query: 180 TVINIPGFTYPVRTHF 195
V+ + G +P++ +
Sbjct: 254 PVLYLEGRQHPIQIFY 269
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 416 (151.5 bits), Expect = 5.1e-72, Sum P(2) = 5.1e-72
Identities = 120/417 (28%), Positives = 206/417 (49%)
Query: 287 GAVLVFMTGWDDINSLNDKLQANR-ILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRK 345
G +L+FM G +DI + ++ L + + +L + + S Q IF G+RK
Sbjct: 651 GDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRK 710
Query: 346 IVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXV 405
++ATNIAETS+T++ ++FVID G K Y+ L +S S
Sbjct: 711 AIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRT 770
Query: 406 QPGECYRLYP-RCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELL 464
PG+CYRLY R D + +PEI RT L ++ L +KSL + + F + +P
Sbjct: 771 GPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKF--HFMDAPPQD 828
Query: 465 AVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGL 524
+ N++ L +GALD+ +LT +G+ + P++P L KMLI+ A C + VLTIV+ L
Sbjct: 829 NMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSML 888
Query: 525 SVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSA 584
SV F P +++ A+A K +F SDHL + + W+ + ++C N+L
Sbjct: 889 SVPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSA---KWCADNYLHV 945
Query: 585 PSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
++K + +R + +++D L I N G + +R IC + + + G+
Sbjct: 946 KALKKVREVRAQLKEIMQDLKL----PLISN--GSEWDIVRKCICSAYFHNAARLKGIGE 999
Query: 645 SSSLKTMEDG-QVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
+++T G FL+ S +P ++V++E + +++ TAV D++ L
Sbjct: 1000 YVNVRT---GIPCFLHPTSALFGMGFMP-DYVVYHELIMTAKEYMQCVTAV-DAIWL 1051
Score = 401 (146.2 bits), Expect = 5.1e-72, Sum P(2) = 5.1e-72
Identities = 87/202 (43%), Positives = 126/202 (62%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP + + +++ I +N VVII GETG GKTTQ+ Q++LE G I CTQ
Sbjct: 438 REYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGF----GDSGLIGCTQ 493
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++AMSV+ RVA E G LG+ VGY +R E T + + T GILLR L D +L
Sbjct: 494 PRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLD 553
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG-ATVIN 183
+ +I+DE HER +N D L +L++++++R +L+L++ SAT+DA+ F+ +FGG
Sbjct: 554 QYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFT 613
Query: 184 IPGFTYPVRT-HF---LEDILD 201
IPG T+PV H +ED +D
Sbjct: 614 IPGRTFPVELFHARTPVEDYVD 635
Score = 49 (22.3 bits), Expect = 5.4e-35, Sum P(2) = 5.4e-35
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 209 PYNQIDDY---GQEKMWKMSKQAPRKRKSQIASAVEDTL 244
P+N++ D +EK W+ Q PR Q A E+ L
Sbjct: 246 PFNKVSDEFVEKREKQWQEKTQKPRLTVKQQAIKRENEL 284
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 416 (151.5 bits), Expect = 5.1e-72, Sum P(2) = 5.1e-72
Identities = 120/417 (28%), Positives = 206/417 (49%)
Query: 287 GAVLVFMTGWDDINSLNDKLQANR-ILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRK 345
G +L+FM G +DI + ++ L + + +L + + S Q IF G+RK
Sbjct: 651 GDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRK 710
Query: 346 IVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXV 405
++ATNIAETS+T++ ++FVID G K Y+ L +S S
Sbjct: 711 AIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRT 770
Query: 406 QPGECYRLYP-RCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELL 464
PG+CYRLY R D + +PEI RT L ++ L +KSL + + F + +P
Sbjct: 771 GPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKF--HFMDAPPQD 828
Query: 465 AVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGL 524
+ N++ L +GALD+ +LT +G+ + P++P L KMLI+ A C + VLTIV+ L
Sbjct: 829 NMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSML 888
Query: 525 SVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSA 584
SV F P +++ A+A K +F SDHL + + W+ + ++C N+L
Sbjct: 889 SVPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSA---KWCADNYLHV 945
Query: 585 PSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
++K + +R + +++D L I N G + +R IC + + + G+
Sbjct: 946 KALKKVREVRAQLKEIMQDLKL----PLISN--GSEWDIVRKCICSAYFHNAARLKGIGE 999
Query: 645 SSSLKTMEDG-QVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
+++T G FL+ S +P ++V++E + +++ TAV D++ L
Sbjct: 1000 YVNVRT---GIPCFLHPTSALFGMGFMP-DYVVYHELIMTAKEYMQCVTAV-DAIWL 1051
Score = 401 (146.2 bits), Expect = 5.1e-72, Sum P(2) = 5.1e-72
Identities = 87/202 (43%), Positives = 126/202 (62%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP + + +++ I +N VVII GETG GKTTQ+ Q++LE G I CTQ
Sbjct: 438 REYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGF----GDSGLIGCTQ 493
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++AMSV+ RVA E G LG+ VGY +R E T + + T GILLR L D +L
Sbjct: 494 PRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLD 553
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG-ATVIN 183
+ +I+DE HER +N D L +L++++++R +L+L++ SAT+DA+ F+ +FGG
Sbjct: 554 QYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFT 613
Query: 184 IPGFTYPVRT-HF---LEDILD 201
IPG T+PV H +ED +D
Sbjct: 614 IPGRTFPVELFHARTPVEDYVD 635
Score = 49 (22.3 bits), Expect = 5.4e-35, Sum P(2) = 5.4e-35
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 209 PYNQIDDY---GQEKMWKMSKQAPRKRKSQIASAVEDTL 244
P+N++ D +EK W+ Q PR Q A E+ L
Sbjct: 246 PFNKVSDEFVEKREKQWQEKTQKPRLTVKQQAIKRENEL 284
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 442 (160.7 bits), Expect = 5.1e-72, Sum P(2) = 5.1e-72
Identities = 118/441 (26%), Positives = 222/441 (50%)
Query: 265 PDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKL--QANRIL--GDPTRVLL 320
PD I + +E V+ I + E G VL F+TG +++ ++ L QA + G + +
Sbjct: 255 PDYIK-STVETVV-KIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRV 312
Query: 321 LTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALN 380
L + + S EQ +F+ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRT 372
Query: 381 NTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCL 440
CL+ +S S + G+CYRLY +D + +PE+ R+ L + L
Sbjct: 373 AIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVIL 432
Query: 441 QIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTV-LGQYLAMLPMEP 499
Q+K+L + + F + P ++ A+E L +G LD + LT LG +A P+ P
Sbjct: 433 QLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNP 490
Query: 500 KLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVR 559
KML+ F C + +L+I A + +++ F+ P ++K A +F+ + DHL ++
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLN 550
Query: 560 AFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGR 619
+E + + ++C ++FL+ + ++R++ LL V ++ G
Sbjct: 551 IYEAFIKHNKDS---KWCQEHFLNYKGLVRAATVREQLKKLL-----VKFQVPRKSSEGD 602
Query: 620 DERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNE 679
+ +R ++ G + + G +++ +D ++ ++ SV E P W+++NE
Sbjct: 603 PDLVLRCIVS-GFFANAARFHSTGAYRTIR--DDHELHIHPASVLYAEK--PPRWVIYNE 657
Query: 680 KMKVNSVFLKDSTAVSDSVLL 700
++ + +++D TA+ + LL
Sbjct: 658 VIQTSKYYMRDVTAIESAWLL 678
Score = 360 (131.8 bits), Expect = 5.1e-72, Sum P(2) = 5.1e-72
Identities = 79/204 (38%), Positives = 124/204 (60%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R+ LP +K +N +L I Q V+I GETGCGK+TQ+PQ++ E+ T+ G V + TQ
Sbjct: 51 RQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLVDRNL 123
PRR++A++V+ RVA ERG LG VGY +R + + TR+ F T G+L+R ++VD L
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLL 167
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG----- 178
+ +++DE HER + D + +LK + +R +LRL++ SATLDA+ F +F
Sbjct: 168 TKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSD 227
Query: 179 -----ATVINIPGFTYPVRTHFLE 197
++ + G T+PV +L+
Sbjct: 228 PARDTCVILTVEGRTFPVDIFYLQ 251
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 423 (154.0 bits), Expect = 6.3e-72, Sum P(2) = 6.3e-72
Identities = 86/191 (45%), Positives = 126/191 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+LE R+ LP + + LLT I N +VI+ GETG GKTTQ+ Q++ E T G +
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDY-GMIG-- 581
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RV+ E G LGE VGY +R E T + + T GILLR L +
Sbjct: 582 -CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLRE 640
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L + +I+DE HER +N D L +L+++++RR +L+L++ SAT+DAE F+S+FG
Sbjct: 641 ADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVP 700
Query: 181 VINIPGFTYPV 191
+ +IPG T+PV
Sbjct: 701 IFHIPGRTFPV 711
Score = 394 (143.8 bits), Expect = 6.3e-72, Sum P(2) = 6.3e-72
Identities = 117/421 (27%), Positives = 203/421 (48%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVR 344
PG +L+FM G +DI +D++ + L + + +L + + S Q IF + GVR
Sbjct: 740 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 799
Query: 345 KIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXX 404
K ++ATNIAETS+T++ ++FVID G K ++ L IS +
Sbjct: 800 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 859
Query: 405 VQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
PG+C+RLY + Y + +PEI RT L ++ L +KSL + + F + P
Sbjct: 860 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPE 917
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
+ N++ L I+GALD+ LT G+ + P++P L KMLI+ C +L IV+
Sbjct: 918 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 977
Query: 524 LSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLS 583
LSV F P +++ ++ + +F+ SDHL+ + + WK+ +C +F+
Sbjct: 978 LSVPAIFYRPKGREEESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTI---WCNDHFIH 1034
Query: 584 APSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNG 643
A +M+ + +R + LKD +V S+ + G D +R IC + + + G
Sbjct: 1035 AKAMRKVREVRAQ----LKDI-MVQQRMSLASC-GTDWDIVRKCICAAYFHQAAKLKGIG 1088
Query: 644 KSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLF 702
+ +++T G L+ S P ++V++E + +++ TAV L
Sbjct: 1089 EYVNIRT---GMPCHLHPTSSLFGMGYTP-DYIVYHELVMTTKEYMQCVTAVDGEWLAEL 1144
Query: 703 G 703
G
Sbjct: 1145 G 1145
Score = 41 (19.5 bits), Expect = 8.5e-35, Sum P(2) = 8.5e-35
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 225 SKQAPRKRKSQIASAVEDTLKAA 247
S+Q R+R + ASA+E+ + A
Sbjct: 1157 SRQENRRRAKEEASAMEEEMALA 1179
Score = 39 (18.8 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 219 EKMWKMSKQAPRKRK 233
E+ W+ S+Q R+R+
Sbjct: 126 EEFWERSRQRERERR 140
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 422 (153.6 bits), Expect = 1.0e-71, Sum P(2) = 1.0e-71
Identities = 86/191 (45%), Positives = 127/191 (66%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+LE R+ LP + + LLT I N +VI+ GETG GKTTQ+ Q++ E T G +
Sbjct: 524 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDY-GMIG-- 580
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RV+ E G LGE VGY +R E +T + + T GILLR L +
Sbjct: 581 -CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLRE 639
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L + VI+DE HER +N D L +L+++++RR +L+L++ SAT+DAE F+++FG
Sbjct: 640 ADLDHYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVP 699
Query: 181 VINIPGFTYPV 191
+ +IPG T+PV
Sbjct: 700 IFHIPGRTFPV 710
Score = 393 (143.4 bits), Expect = 1.0e-71, Sum P(2) = 1.0e-71
Identities = 117/421 (27%), Positives = 202/421 (47%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVR 344
PG +L+FM G +DI +D++ + L + + +L + + S Q IF + GVR
Sbjct: 739 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 798
Query: 345 KIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXX 404
K ++ATNIAETS+T++ ++FVID G K ++ L IS +
Sbjct: 799 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 858
Query: 405 VQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
PG+C+RLY + Y + +PEI RT L ++ L +KSL + + F + P
Sbjct: 859 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPE 916
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
+ N++ L I+GALD+ LT G+ + P++P L KMLI+ C +L IV+
Sbjct: 917 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 976
Query: 524 LSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLS 583
LSV F P +++ ++ + +F+ SDHL + + WK+ +C +F+
Sbjct: 977 LSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTI---WCNDHFIH 1033
Query: 584 APSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNG 643
A +M+ + +R + LKD +V S+ + G D +R IC + + + G
Sbjct: 1034 AKAMRKVREVRAQ----LKDI-MVQQRMSLASC-GTDWDIVRKCICAAYFHQAAKLKGIG 1087
Query: 644 KSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLF 702
+ +++T G L+ S P ++V++E + +++ TAV L
Sbjct: 1088 EYVNIRT---GMPCHLHPTSSLFGMGYTP-DYIVYHELVMTTKEYMQCVTAVDGEWLAEL 1143
Query: 703 G 703
G
Sbjct: 1144 G 1144
Score = 44 (20.5 bits), Expect = 8.3e-32, Sum P(2) = 8.3e-32
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 219 EKMWKMSKQAPRKRKSQ--IASAVE--DTLKAANFNEYSSQTRE 258
E+ W+ S+Q R+R+ AS+ E D K + + S + RE
Sbjct: 126 EEFWERSRQRERERREHGVYASSKEEKDRKKERSRDRDSDRKRE 169
Score = 41 (19.5 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 225 SKQAPRKRKSQIASAVEDTLKAA 247
S+Q R+R + ASA+E+ + A
Sbjct: 1156 SRQENRRRAKEEASAMEEEMALA 1178
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 438 (159.2 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 111/426 (26%), Positives = 214/426 (50%)
Query: 280 ICEKERPGAVLVFMTGWDDINSLNDKL--QANRIL--GDPTRVLLLTCHGSMASSEQRLI 335
I + E G +L F+TG +++ ++ L QA + G + +L + + S EQ +
Sbjct: 268 IHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKV 327
Query: 336 FDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSX 395
F+ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+ CL+ +S S
Sbjct: 328 FERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASA 387
Query: 396 XXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLS 455
+ G+CYRLY ++ + +PE+ R+ L + LQ+K+L + ++ F
Sbjct: 388 NQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRF-- 445
Query: 456 RALQSPELLAVQNAIEYLKIIGALDHNEELTV-LGQYLAMLPMEPKLGKMLILGAIFNCL 514
+ P ++ A+E L +G LD + LT LG +A P+ P KML+ F C
Sbjct: 446 HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCS 505
Query: 515 EPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGY 574
+ +L+I A + +++ F+ P ++K A +F+ + DHL ++ +E + +
Sbjct: 506 QEILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEAFIKHNKSS--- 562
Query: 575 EYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYP 634
++C ++FL+ + ++R + LL V ++ G + +R ++ G +
Sbjct: 563 QWCQEHFLNYKGLVRAATVRDQLKKLL-----VKFQVPKMSSEGDPDPVLRCIVS-GFFA 616
Query: 635 GISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAV 694
+ G +++ +D ++ ++ SV E P W+++NE ++ + +++D TA+
Sbjct: 617 NAARFHSTGAYRTIR--DDHELHIHPASVLYAEK--PPRWVIYNEVIQTSKYYMRDVTAI 672
Query: 695 SDSVLL 700
+ LL
Sbjct: 673 ESAWLL 678
Score = 361 (132.1 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 81/204 (39%), Positives = 123/204 (60%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R+ LP +K +N +L + Q V+I GETGCGK+TQVPQ++ E+ T+ G V + TQ
Sbjct: 51 RQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLVDRNL 123
PRR++A++V+ RVA ERG LG VGY +R + TR+ F T G+L+R ++VD L
Sbjct: 108 PRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLL 167
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG----- 178
+ V++DE HER + D + +LK + +R +LRL++ SATLDAE F +F
Sbjct: 168 TKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSD 227
Query: 179 -----ATVINIPGFTYPVRTHFLE 197
++ + G T+PV +L+
Sbjct: 228 PARDTCVILTVEGRTFPVDIFYLQ 251
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 421 (153.3 bits), Expect = 1.3e-71, Sum P(2) = 1.3e-71
Identities = 85/191 (44%), Positives = 127/191 (66%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+LE R+ LP + + LLT I N +VI+ GETG GKTTQ+ Q++ E T G +
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDY-GMIG-- 581
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RV+ E G LGE VGY +R E +T + + T GILLR L +
Sbjct: 582 -CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLRE 640
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L + +I+DE HER +N D L +L+++++RR +L+L++ SAT+DAE F+++FG
Sbjct: 641 ADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVP 700
Query: 181 VINIPGFTYPV 191
+ +IPG T+PV
Sbjct: 701 IFHIPGRTFPV 711
Score = 393 (143.4 bits), Expect = 1.3e-71, Sum P(2) = 1.3e-71
Identities = 117/421 (27%), Positives = 202/421 (47%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVR 344
PG +L+FM G +DI +D++ + L + + +L + + S Q IF + GVR
Sbjct: 740 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 799
Query: 345 KIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXX 404
K ++ATNIAETS+T++ ++FVID G K ++ L IS +
Sbjct: 800 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 859
Query: 405 VQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
PG+C+RLY + Y + +PEI RT L ++ L +KSL + + F + P
Sbjct: 860 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPE 917
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
+ N++ L I+GALD+ LT G+ + P++P L KMLI+ C +L IV+
Sbjct: 918 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 977
Query: 524 LSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLS 583
LSV F P +++ ++ + +F+ SDHL + + WK+ +C +F+
Sbjct: 978 LSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTI---WCNDHFIH 1034
Query: 584 APSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNG 643
A +M+ + +R + LKD +V S+ + G D +R IC + + + G
Sbjct: 1035 AKAMRKVREVRAQ----LKDI-MVQQRMSLASC-GTDWDIVRKCICAAYFHQAAKLKGIG 1088
Query: 644 KSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLF 702
+ +++T G L+ S P ++V++E + +++ TAV L
Sbjct: 1089 EYVNIRT---GMPCHLHPTSSLFGMGYTP-DYIVYHELVMTTKEYMQCVTAVDGEWLAEL 1144
Query: 703 G 703
G
Sbjct: 1145 G 1145
Score = 41 (19.5 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 225 SKQAPRKRKSQIASAVEDTLKAA 247
S+Q R+R + ASA+E+ + A
Sbjct: 1157 SRQENRRRAKEEASAMEEEMALA 1179
Score = 41 (19.5 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 219 EKMWKMSKQAPRKRKSQ--IASAVED 242
E+ W+ S+Q R+R+ AS+ E+
Sbjct: 126 EEFWERSRQRERERREHGVYASSKEE 151
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 427 (155.4 bits), Expect = 1.8e-71, Sum P(2) = 1.8e-71
Identities = 121/417 (29%), Positives = 206/417 (49%)
Query: 282 EKERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPES 341
+KE PG +L F+TG +++ D L+ + + +L +GSM+S++Q +F P
Sbjct: 257 QKEPPGDILAFLTGQEEVLEALDLLREYIASSEQENLKVLPMYGSMSSTDQLSVFFTPPK 316
Query: 342 GVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXX 401
G RK+VLATNIAETSITI +V+VIDCG K Y+ + L+ +S S
Sbjct: 317 GTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGR 376
Query: 402 XXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSP 461
++PG+ YRLY + Y+A A Q PE+ R+ L LQ+K+L +G I F + P
Sbjct: 377 AGRMRPGKVYRLYTKSDYEALAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPS--PP 434
Query: 462 ELLAVQNAIEYLKIIGALDHNEELTV-LGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTI 520
+ +A+E L + A+D LT +G LA LP L KML + C E ++TI
Sbjct: 435 PAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITI 494
Query: 521 VAGLSVRDPFLAPMDK--KDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCW 578
+A L V+ F P + A +F D + ++ A+ G+ E G+ E+C
Sbjct: 495 IALLQVQSIFSRPASAVAQQSGRIAHRKFEVAEGDFITMLNAYTGF--VEEGMTK-EFCG 551
Query: 579 KNFLSAPSMKVIDSLRKEFLSLL-KDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGIS 637
+ FL ++K SLR++ +++ K G+ I + G E+ + + G + ++
Sbjct: 552 QYFLIYRNLKRAHSLREQLITVARKKYGI-----PIFSCKGDVEKLCKCITA-GFFTQVA 605
Query: 638 SIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAV 694
+ +G + + ++ ++ NS + Y +V+ E ++ +F+ T +
Sbjct: 606 YLHHSGVYRQISS--GTELAIHPNSTLYTLPQAQY--VVYGELLQTTKLFMNYVTVI 658
Score = 370 (135.3 bits), Expect = 1.8e-71, Sum P(2) = 1.8e-71
Identities = 99/269 (36%), Positives = 153/269 (56%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
++E R LP + ++++L + ++QVVI+ GETG GK+TQVPQ++ E +G + I
Sbjct: 40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWG-WHTKGLI-GI 97
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVR-LEGMKGRDTRLLFCTTGILLRRLLV 119
T+PRR+S ++++ RVA ERGE +G++VGY VR LE M T++ F T GILLR +L
Sbjct: 98 --TEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSC-TKIKFMTEGILLREVLA 154
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYF--- 176
D L +IVDE HER M D +L +LK +L +R L+L++ SAT+DA FS +F
Sbjct: 155 DPLLTQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWP 214
Query: 177 GGATV---INIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRK 233
G V ++I G +PV +L + P E +WK+ ++ P
Sbjct: 215 GSGEVSVKLSIEGRMHPVSNFYLNE----------PCADYVKETVETVWKLHQKEPPGDI 264
Query: 234 SQIASAVEDTLKAANF-NEY-SSQTRESL 260
+ E+ L+A + EY +S +E+L
Sbjct: 265 LAFLTGQEEVLEALDLLREYIASSEQENL 293
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 444 (161.4 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 128/427 (29%), Positives = 208/427 (48%)
Query: 283 KERPGAVLVFMTGWDDINSLNDKLQAN-RIL--GDPTRVLLLTCHGSMASSEQRLIFDEP 339
+E G +L+FMTG DDI L +L+ R L G ++ HGS+ Q +F P
Sbjct: 210 REPEGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPP 269
Query: 340 ESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXX 399
R+ +++TNIAETS+T++ VV+VID G K+ Y+ + L IS V
Sbjct: 270 PPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRA 329
Query: 400 XXXXXVQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRAL 458
+PG+CYRLYP VY D F + +PEI RT L L +KSL L I L
Sbjct: 330 GRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFL 389
Query: 459 QSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVL 518
+P ++++A++ L I A+D N +T +G+ ++ LP+EP L + LI CL L
Sbjct: 390 DAPSSESLEDALKQLYFIDAIDENGAITRIGRTMSDLPLEPSLSRTLIEANETGCLSQAL 449
Query: 519 TIVAGLSVRDPFLA----PMDKKDLA-EAAKSQFSHDYSDHLALVRAFEGWKDAERGLAG 573
T+VA LS L P +KK E + Y DH+ L++ FE W +R
Sbjct: 450 TVVAMLSAETTLLPARSKPSEKKRKHDEDSNLPNGSGYGDHIQLLQIFESW---DRTNYD 506
Query: 574 YEYCWKNFLSAPSMKVIDSLRKEFLSLL----KDTGLVDCDTSICNAWGRDE-RFIRAVI 628
+C +N + M + +R++ ++ KD V D ++ RD+ R +R +
Sbjct: 507 PVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRLEVGADGRKSSS--RDDYRKLRKAL 564
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYP-WLVFNEKMKVNSVF 687
C G I+ + + + V ++ +SV + +++ P ++V++E + F
Sbjct: 565 CVGNANQIAERMLRHNGYRTLSFQSQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPF 624
Query: 688 LKDSTAV 694
+++ AV
Sbjct: 625 MRNVCAV 631
Score = 352 (129.0 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 77/186 (41%), Positives = 113/186 (60%)
Query: 7 NLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPR 66
NLP + + +++ + +N VV+I GETG GK+TQ+ Q + T + V +I TQPR
Sbjct: 3 NLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYT--KSGVIAI--TQPR 58
Query: 67 RISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGV 126
R++A+SV+ RVA E LGE VGY +R E TR+ + T G+LLR L + L
Sbjct: 59 RVAAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDY 118
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLS-RRPELRLVLMSATLDAELFSSYFGGATVINIP 185
+ +I+DE HER +N D LL ++K L+ R ++++ SATLD E S +F G V+N+P
Sbjct: 119 SVIILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVP 178
Query: 186 GFTYPV 191
G YPV
Sbjct: 179 GKLYPV 184
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 410 (149.4 bits), Expect = 2.3e-71, Sum P(2) = 2.3e-71
Identities = 84/196 (42%), Positives = 129/196 (65%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R++LP Y + L I++NQ +I+ GETG GKTTQ+PQ++ E+ S V I C
Sbjct: 224 EVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGY-SRNNQV--IAC 280
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLE-GMKGRDTRLLFCTTGILLRRLLVDR 121
TQPRR++A SV+ RVA+E KLGE VGY +R + K T + + T G+LLR L D
Sbjct: 281 TQPRRVAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDP 340
Query: 122 NLKGVTHVIVDEVHERGMNEDFLLIVLKDLL--SRRPELRLVLMSATLDAELFSSYFGGA 179
L + +++DE HER ++ + LL +LKD++ +R+ +L++++ SAT++AE FS +F A
Sbjct: 341 TLGKYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFFNNA 400
Query: 180 TVINIPGFTYPVRTHF 195
++NIPG +PV+ H+
Sbjct: 401 PILNIPGRRFPVKIHY 416
Score = 396 (144.5 bits), Expect = 2.3e-71, Sum P(2) = 2.3e-71
Identities = 100/325 (30%), Positives = 172/325 (52%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQANRI-LGDPTRVLLL-TCHGSMASSEQRLIFDEPESGV 343
PG +LVF+TG D+I ++ + L+ + + LGD +++ + + ++ Q+ IF S
Sbjct: 442 PGDILVFLTGQDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNT 501
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RKIVLATNIAETSITI+ + +VID G K+ Y+ L+ S S
Sbjct: 502 RKIVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAG 561
Query: 404 XVQPGECYRLYPR-CVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V PG+C+RL+ + Y+ Q PEI R L S+ L + SL + + GF + P
Sbjct: 562 RVGPGKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILLLLSLGINDLLGF--EFMDPPS 619
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
A+ A+ L +GAL+ +LT G+ ++ P++P K ++ F+ + +++I+A
Sbjct: 620 KEAIIKALNLLYALGALNTQGKLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIA 679
Query: 523 GLSVRDP-FLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNF 581
L+ F P DKK+LA+ K +F+ D L++ ++ W D+ G + ++C F
Sbjct: 680 MLNESSNLFYRPKDKKELADKRKQEFNDLQGDQFMLLKIWQQWVDS--GYS-VQWCQDYF 736
Query: 582 LSAPSMKVIDSLRKEFLSLLKDTGL 606
+ +MK I ++ ++ + L K G+
Sbjct: 737 IQYKTMKRIKNIYEQLIRLSKKIGI 761
Score = 40 (19.1 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 214 DDYGQEKMWKMSKQAPRKRKSQIASA 239
DD +E+ ++++Q P K S I +A
Sbjct: 20 DDNEEEEREQITQQGPLKATSTIETA 45
>UNIPROTKB|I3LCY3 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 GO:GO:0004386 GO:GO:0043330
GeneTree:ENSGT00550000074257 EMBL:FP312685
Ensembl:ENSSSCT00000023601 Uniprot:I3LCY3
Length = 987
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 154/337 (45%), Positives = 210/337 (62%)
Query: 319 LLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDA 378
++ H ++ +F GVRKIV+ATNIAETSITI+DVV+VID GK KET +D
Sbjct: 491 IIFKYHSNLCYLNILQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDT 550
Query: 379 LNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSL 438
NN S + W+S + VQPG CY LY +YQLPEILRTPL+ L
Sbjct: 551 QNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEEL 610
Query: 439 CLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPME 498
CLQIK LRLG IA FLSR + P AV +I++L + ALD EELT LG +LA LP+E
Sbjct: 611 CLQIKILRLGGIAYFLSRLMDPPSNEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVE 670
Query: 499 PKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDY-SDHLAL 557
P +GKM++ GA+F CL+PVLTI A LS +DPF+ P+ K+ +A+A + + + D SDHL +
Sbjct: 671 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTV 730
Query: 558 VRAFEGWKDAERGLAGYE--YCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV---DCDTS 612
V AFEGW++A R YE YCW+ FLS+ +++++ +++ +F L G V +
Sbjct: 731 VNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVRSRNPKDP 790
Query: 613 ICNAWGRDERFIRAVICYGLYPGISSIVQN-GKSSSL 648
N +E+ I+AVIC GLYP ++ I N GK +
Sbjct: 791 ESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKI 827
Score = 177 (67.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 57/197 (28%), Positives = 100/197 (50%)
Query: 575 EYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV---DCDTSICNAWGRDERFIRAVICYG 631
+YCW+ FLS+ +++++ +++ +F L G V + N +E+ I+AVIC G
Sbjct: 750 DYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVRSRNPKDPESNINSDNEKIIKAVICAG 809
Query: 632 LYPGISSIVQN-GKSSSL-------------KTMEDGQVFLYSNSVNARESEIPYPWLVF 677
LYP ++ I N GK + +T ++ +LYS ++ R E + F
Sbjct: 810 LYPKVAKIRLNLGKKRKIFLIHVPKSTDDLIETKQNKYKYLYSFAIMGRLYEKNV--VFF 867
Query: 678 NEKMKVNSVFLKDSTAVSDSVLLLFGGSIS-QGEIDGHLKMMGGYLEFFMNPS-VADMYQ 735
+ ++L D T VS LL FGG IS Q + D + ++ F +P+ +A + +
Sbjct: 868 GLMLCFGLIYLYDCTEVSPYCLLFFGGDISIQKDSDQETIAVDEWI-IFQSPARIAHLVK 926
Query: 736 CIRRELDELIQNKLLNP 752
+R+ELD L+Q K+ +P
Sbjct: 927 ELRKELDILLQEKIESP 943
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 426 (155.0 bits), Expect = 3.4e-71, Sum P(3) = 3.4e-71
Identities = 129/433 (29%), Positives = 209/433 (48%)
Query: 283 KERPGAVLVFMTGWDDINSLNDKLQAN--RILGDPTRVLLLTCHGSMASSEQRLIFDEPE 340
+E+PG +LVF+TG D+I S+ +Q I D ++L L ++ S +Q +F
Sbjct: 288 EEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAP 347
Query: 341 SGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXX 400
+G RK++LATNIAETSITI + +VID G K SYD L S
Sbjct: 348 TGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRSG 407
Query: 401 XXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQS 460
PG+ +RLYP ++ + PEI R L ++ LQ+K+L + I GF +
Sbjct: 408 RAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDIVGF--DFIDK 465
Query: 461 PELLAVQNAIEYLKIIGALDHNEEL-TVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLT 519
P A+ A+ L +GAL + +L +G ++ LP+EP K LIL FNCLE +L
Sbjct: 466 PSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLI 525
Query: 520 IVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKD--AERGLAGY--- 574
VA LSV F P +K++ A +K+ F+ DHL + + + +R AG
Sbjct: 526 TVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSVYRESDEFLEKRKAAGSGNN 585
Query: 575 ------EYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVI 628
++C +N++++ S+K + ++ ++ G + S C G D R +
Sbjct: 586 IDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGF---NVSSC---GNDMLAFRRCL 639
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQVF-LYSNSVNARESEIPYPWLVFNEKMKVNSVF 687
+ Q + + +E G+V ++ SV R P ++FNE M+ + +
Sbjct: 640 AASFF---LKAAQRQLDGTYRALESGEVVHIHPTSVLFRAK--P-ECVIFNELMQTSKKY 693
Query: 688 LKDSTAVSDSVLL 700
+K+ T + DS+ L
Sbjct: 694 IKNLTII-DSLWL 705
Score = 303 (111.7 bits), Expect = 3.4e-71, Sum P(3) = 3.4e-71
Identities = 65/155 (41%), Positives = 97/155 (62%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E RR+LP + RL+ + +N ++II GETG GKTTQ+PQF+ + G + I
Sbjct: 36 EHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCR-EGKMIGI-- 92
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRRI+A++V++RVA E +LG+ VGY +R + TRL + T G+LLR L+D +
Sbjct: 93 TQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPH 152
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE 157
L + +IVDE H+R ++ D LL +LK + R +
Sbjct: 153 LSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQ 187
Score = 110 (43.8 bits), Expect = 3.4e-71, Sum P(3) = 3.4e-71
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 147 VLKDLLSRR-PELRLVLMSATLDAELFSSYFGGATVINIPGFTYPV----RTHFLEDILD 201
VLK R+ L+L++MSA+LDA +FS YFGGA +++ G +PV H D +D
Sbjct: 217 VLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYVD 276
Query: 202 MT 203
T
Sbjct: 277 AT 278
Score = 38 (18.4 bits), Expect = 3.9e-29, Sum P(3) = 3.9e-29
Identities = 12/58 (20%), Positives = 26/58 (44%)
Query: 217 GQEKMWKMSKQAPRKRKSQIASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIE 274
G+E K + P + ++ + + +K N + Q + +L D +GF+ I+
Sbjct: 410 GREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLK-ALGI--DDIVGFDFID 464
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 402 (146.6 bits), Expect = 6.2e-71, Sum P(2) = 6.2e-71
Identities = 101/314 (32%), Positives = 165/314 (52%)
Query: 282 EKERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVL-LLTC--HGSMASSEQRLIFDE 338
E+E G +LVF+TG D+I +L +KL +RI P L+ C ++ +Q +F++
Sbjct: 292 EEEDGGDILVFLTGRDEIENL-EKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMKVFEK 350
Query: 339 PESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXX 398
G RK++LATNIAETS+TIN + +V+D G K ++ L IS S
Sbjct: 351 APKGSRKVILATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISKASAKQR 410
Query: 399 XXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRAL 458
G+CYRLY + ++ +PEI R+ + ++ LQ+K++ + I F L
Sbjct: 411 TGRAGREFEGKCYRLYTQETFEKLDTSSIPEIKRSNIANVILQLKTIGINDILSF--DFL 468
Query: 459 QSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVL 518
+SP + +V ++E L + A+ N LT LG+ +A+ P++P K LI F C E VL
Sbjct: 469 ESPPVASVIKSLELLFCLDAISDNGSLTELGKKMALFPLDPMYSKTLIKSIEFECSEEVL 528
Query: 519 TIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCW 578
I++ LSV F P +KK E K F DH+ + F ++ + + ++C+
Sbjct: 529 IIISILSVESIFFTPKEKKKEVEDVKKIFFSPDGDHITFLNVFREFQKS-KPQQQQQWCF 587
Query: 579 KNFLSAPSM-KVID 591
+F++ SM KV++
Sbjct: 588 DHFINLKSMIKVLN 601
Score = 396 (144.5 bits), Expect = 6.2e-71, Sum P(2) = 6.2e-71
Identities = 82/198 (41%), Positives = 127/198 (64%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
+ +LP + K+ LL ++ VII ETG GKTTQ+PQ++ E+ + +I TQ
Sbjct: 70 KESLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKD--NGIIAI--TQ 125
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++A+S+S+RV+ E G +LG+ VGY VR + T+L + T G+L+R ++D +L
Sbjct: 126 PRRVAAVSISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAMLDSSLS 185
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE---LRLVLMSATLDAELFSSYFGGATV 181
+ +I+DE HER +N D L +LK + RR + L++++MSATLDAELFS YF A V
Sbjct: 186 KYSVIILDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYFNNAPV 245
Query: 182 INIPGFTYPVRTHFLEDI 199
+ I G +PV+ ++ E+I
Sbjct: 246 LYIEGRQFPVQIYYTEEI 263
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 415 (151.1 bits), Expect = 6.2e-71, Sum P(2) = 6.2e-71
Identities = 83/191 (43%), Positives = 127/191 (66%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+LE R+ LP + + LLT I N +VI+ GETG GKTTQ+ Q++ + T G +
Sbjct: 526 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGYTDY-GMIG-- 582
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RV+ E G LGE VGY +R E +T + + T GILLR L +
Sbjct: 583 -CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLRE 641
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L + +I+DE HER +N D L +L+++++RR +L+L++ SAT+DA+ F+++FG
Sbjct: 642 ADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDADKFAAFFGNVP 701
Query: 181 VINIPGFTYPV 191
+ +IPG T+PV
Sbjct: 702 IFHIPGRTFPV 712
Score = 393 (143.4 bits), Expect = 6.2e-71, Sum P(2) = 6.2e-71
Identities = 117/421 (27%), Positives = 202/421 (47%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVR 344
PG +L+FM G +DI +D++ + L + + +L + + S Q IF + GVR
Sbjct: 741 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 800
Query: 345 KIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXX 404
K ++ATNIAETS+T++ ++FVID G K ++ L IS +
Sbjct: 801 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 860
Query: 405 VQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
PG+C+RLY + Y + +PEI RT L ++ L +KSL + + F + P
Sbjct: 861 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPE 918
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
+ N++ L I+GALD+ LT G+ + P++P L KMLI+ C +L IV+
Sbjct: 919 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 978
Query: 524 LSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLS 583
LSV F P +++ ++ + +F+ SDHL + + WK+ +C +F+
Sbjct: 979 LSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTI---WCNDHFIH 1035
Query: 584 APSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNG 643
A +M+ + +R + LKD +V S+ + G D +R IC + + + G
Sbjct: 1036 AKAMRKVREVRAQ----LKDI-MVQQRMSLASC-GTDWDIVRKCICAAYFHQAAKLKGIG 1089
Query: 644 KSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLF 702
+ +++T G L+ S P ++V++E + +++ TAV L
Sbjct: 1090 EYVNIRT---GMPCHLHPTSSLFGMGYTP-DYIVYHELVMTTKEYMQCVTAVDGEWLAEL 1145
Query: 703 G 703
G
Sbjct: 1146 G 1146
Score = 43 (20.2 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 219 EKMWKMSKQAPRKRKSQ--IASAVED 242
E+ W+ S+Q R R+ AS+ ED
Sbjct: 126 EEFWERSRQRERDRREHGVYASSKED 151
Score = 41 (19.5 bits), Expect = 6.5e-34, Sum P(2) = 6.5e-34
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 225 SKQAPRKRKSQIASAVEDTLKAA 247
S+Q R+R + ASA+E+ + A
Sbjct: 1158 SRQENRRRAKEEASAMEEEMALA 1180
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 416 (151.5 bits), Expect = 8.0e-71, Sum P(2) = 8.0e-71
Identities = 84/195 (43%), Positives = 128/195 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+LE R+NLP ++ + L I N+V+++ GETG GK+TQ+PQF+ E G V
Sbjct: 89 ILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQ-EGCVA-- 145
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
TQPRR++A+++++RVA+E+G +LGE VGY +R + + TR+ + T G+LLR L+ D
Sbjct: 146 -ITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELIND 204
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L +I+DE HER + D LL +K ++ +RP LR+++MSATL+AE FS +F GA
Sbjct: 205 PILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAE 264
Query: 181 VINIPGFTYPVRTHF 195
+ I G YPV+ H+
Sbjct: 265 ICYISGRQYPVQIHY 279
Score = 379 (138.5 bits), Expect = 8.0e-71, Sum P(2) = 8.0e-71
Identities = 94/321 (29%), Positives = 160/321 (49%)
Query: 286 PGAVLVFMTGWDDINSLND--KLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGV 343
PG +LVF+TG D+I +L K + ++ + ++ S+ +Q +F +
Sbjct: 304 PGDILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANH 363
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK+VL+TNIAETS+TI+ + +VID G AK +++ L IS +
Sbjct: 364 RKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAG 423
Query: 404 XVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
G+CYR+Y +D + +PEI R L L +K+ + F + P
Sbjct: 424 REAAGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTLKARGQNDVINF--HYMDPPSK 481
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
+ A+E+L IGALD N + LG ++++P+ P L + ++ NCL V+ +V+
Sbjct: 482 EGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSC 541
Query: 524 LSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLS 583
LS FL P +K+D A A+ +F H D L + A + ++ + ++C +NF++
Sbjct: 542 LSTDSMFLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLESSHD-SRKQWCSQNFIN 600
Query: 584 APSMKVIDSLRKEFLS-LLKD 603
++K I +RK+ LKD
Sbjct: 601 RRALKTILDIRKQLREHCLKD 621
Score = 37 (18.1 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 212 QIDDYGQEKMWKMSKQAPRKRKSQIASAVEDTLK 245
Q D+G ++ +P KR S +D L+
Sbjct: 58 QDTDFGANEVVGSDNSSPEKRSENSPSKRKDILE 91
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 420 (152.9 bits), Expect = 8.1e-71, Sum P(2) = 8.1e-71
Identities = 86/191 (45%), Positives = 126/191 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+LE R+ LP + + +LL I N +VI+ GETG GKTTQ+ Q++ E TS G V
Sbjct: 556 LLEQRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHEDGYTSY-GMVG-- 612
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RV+ E LGE VGY +R E T + + T GILLR L +
Sbjct: 613 -CTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDGILLRESLRE 671
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L + VI+DE HER +N D L +L++++SRR +L+L++ SAT+D++ F+S+FG
Sbjct: 672 SDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSATMDSDKFASFFGNVP 731
Query: 181 VINIPGFTYPV 191
+ +IPG T+PV
Sbjct: 732 IFHIPGRTFPV 742
Score = 387 (141.3 bits), Expect = 8.1e-71, Sum P(2) = 8.1e-71
Identities = 117/423 (27%), Positives = 202/423 (47%)
Query: 287 GAVLVFMTGWDDINSLNDKLQANRI--LGDPTRVLLLTCHGSMASSEQRLIFDEPESGVR 344
G +L+FM G +DI +D++ R+ L + + +L + + S Q IF + GVR
Sbjct: 772 GDILIFMPGQEDIEVTSDQI-VERLADLENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 830
Query: 345 KIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXX 404
K ++ATNIAETS+T++ ++FV+D G K ++ L IS +
Sbjct: 831 KCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGR 890
Query: 405 VQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
PG+CYRLY + + + +PEI RT L ++ L +KSL + + L + P
Sbjct: 891 TGPGQCYRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDL--LLFHFMDPPPE 948
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
+ N++ L I+GALD+ LT G+ + P++P L KMLI+ +C +L IV+
Sbjct: 949 DNMLNSMYQLWILGALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSM 1008
Query: 524 LSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKN--F 581
LSV F P +++ ++ + +FS SDHL + + WK+ Y W N F
Sbjct: 1009 LSVPSIFYRPKGREEESDQVREKFSVPESDHLTYLNVYLQWKNNN-----YSSIWCNDHF 1063
Query: 582 LSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ 641
+ +M+ + +R + LKD +V ++ + G D IR IC + + +
Sbjct: 1064 IHTKAMRKVREVRAQ----LKDI-MVQQKMNLISC-GSDWDVIRKCICAAYFHQAAKLKG 1117
Query: 642 NGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
G+ +++T G L+ S P +++++E + +++ TAV L
Sbjct: 1118 IGEYVNVRT---GMPCHLHPTSALFGMGYTP-DYIIYHELVMTTKEYMQCVTAVDGEWLA 1173
Query: 701 LFG 703
G
Sbjct: 1174 ELG 1176
>UNIPROTKB|F1S9V4 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:CU693433 Ensembl:ENSSSCT00000002836
ArrayExpress:F1S9V4 Uniprot:F1S9V4
Length = 1333
Score = 432 (157.1 bits), Expect = 3.2e-70, Sum P(3) = 3.2e-70
Identities = 126/390 (32%), Positives = 197/390 (50%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGV 343
ER +VLVF+ G +IN +++ L N + R+ + H S+ EQ +F P G
Sbjct: 391 ER-SSVLVFLPGLGEINCMHELL-TNMV---HKRLQVYPLHSSVTLEEQNNVFLSPVPGY 445
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVS-XXXXXXXX 402
RK++L+TNIAE+S+T+ DV +VID + D N L SW S S
Sbjct: 446 RKVILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKEGRA 505
Query: 403 XXVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSP 461
V G CYRL P+ +D + ++ +PE+LR PL S L++K L +G L+ AL P
Sbjct: 506 GRVSKGYCYRLVPKDFWDTSIPDHVIPEMLRCPLGSTILKLKLLDMGEPRALLATALSPP 565
Query: 462 ELLAVQNAIEYLKIIGAL------D----HNEELTVLGQYLAMLPMEPKLGKMLILGAIF 511
L ++ I LK +GAL D H+ ELT LG+ LA LP+ +LGK+++LG +F
Sbjct: 566 SLGDIERTILLLKEVGALAVRGPRDDENPHDGELTFLGRVLAHLPVNQQLGKLIVLGHVF 625
Query: 512 NCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFS-HDYSDHLALVRAFEGWKDA-ER 569
CL+ L I A LS+++ F P + +K FS SD +ALV AF+ W+ +R
Sbjct: 626 GCLDECLIIAASLSLKNFFAMPFRQHLDGYRSKMNFSGSSKSDCIALVEAFKAWQTCRQR 685
Query: 570 GLAGY---EYCWK--NFLSAPSMKVIDSLRKEFLSLLKDTGL-VDCDTSICNA-WGRDER 622
G + E W N++ ++ + L +E S + + DC + + + +R
Sbjct: 686 GELRHPKDELDWGRLNYIQIKRIREVAELYEELKSRVSQFNMHADCRRPVLDREYPHKQR 745
Query: 623 FIRAVICYG-LYPGISSIVQNGKSSSLKTM 651
FI V+ G YP + Q + +++ +
Sbjct: 746 FILQVVLAGAFYPNYFTFGQPDEEVAVREL 775
Score = 381 (139.2 bits), Expect = 3.2e-70, Sum P(3) = 3.2e-70
Identities = 83/213 (38%), Positives = 130/213 (61%)
Query: 7 NLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPR 66
+LP + K +++ I N VVII G TG GK+TQ+PQ+IL+ + R C+I+ TQPR
Sbjct: 138 DLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYILDRSVQ--RSTYCNIVVTQPR 195
Query: 67 RISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGV 126
+I A S++ ++ ER LG VGY+V LE + DT+L++ TTG+LL++++ ++L
Sbjct: 196 KIGASSIARWISKERAWTLGGLVGYQVGLEKIATEDTKLIYMTTGVLLQKIVSAKSLMEF 255
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPE-LRLVLMSATLDAELFSSYFG-------- 177
TH+ +DEVHER DFLL+V++ LL +++VLMSAT+ + F+ YF
Sbjct: 256 THIFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNELN 315
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPY 210
A V + G Y V +L+D+ + RL+P+
Sbjct: 316 PACVYEVEGEPYAVEECYLDDLEHLHRGRLSPH 348
Score = 41 (19.5 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 311 ILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLA 349
IL P L CH S R ++ E ES V ++++
Sbjct: 1156 ILHGPFNPYALKCHSLTRISTFRCVWIEKES-VNSVIVS 1193
Score = 38 (18.4 bits), Expect = 9.7e-30, Sum P(2) = 9.7e-30
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 316 TRVLLLTCHGSMASSEQRLIF-DEPESGVRKIVLATNIA 353
TR+ C S +I D PE G +++++A +++
Sbjct: 1172 TRISTFRCVWIEKESVNSVIVSDAPEDGHQRMLVAASLS 1210
Score = 37 (18.1 bits), Expect = 3.2e-70, Sum P(3) = 3.2e-70
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 808 PGGDNSKSQLQTLLTRAGYAAPS---YRTKQ 835
P G ++ L R GYA + Y +KQ
Sbjct: 1073 PAGAQGSIDVRAALVREGYAELAEEPYESKQ 1103
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 426 (155.0 bits), Expect = 8.1e-70, Sum P(2) = 8.1e-70
Identities = 118/443 (26%), Positives = 222/443 (50%)
Query: 265 PDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKL--QANRI--LGDPTRVLL 320
PD I + +E V+ I + E G +L F+TG +++ ++ L QA + G + +
Sbjct: 247 PDYIK-STVETVM-KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRV 304
Query: 321 LTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALN 380
L + + S EQ +F+ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+
Sbjct: 305 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRT 364
Query: 381 NTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCL 440
CL+ + +S S + G+CYRLY +D + +PE+ R+ L + L
Sbjct: 365 TIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVIL 424
Query: 441 QIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTV-LGQYLAMLPMEP 499
Q+K+L + + F + P ++ A+E L +G LD + LT LG +A P+ P
Sbjct: 425 QLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNP 482
Query: 500 KLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVR 559
KML+ F C + +L+I A + +++ F+ P ++K A +F+ + DHL ++
Sbjct: 483 MFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEEGDHLTMLN 542
Query: 560 AFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGR 619
+E + + ++C ++FL+ + ++R++ LL V ++ G
Sbjct: 543 VYEAFIKHNKNS---QWCQEHFLNYKGLIRAATVREQLKKLL-----VKFQVPKKSSEGD 594
Query: 620 DERFIRAVICYGLYPGISSIVQNGK-SSSLK-TMEDGQVFLYSNSVNARESEIPYPWLVF 677
+ +R ++ G + + G S +L + + QV L++ V +S +++
Sbjct: 595 PDPVLRCIVS-GFFANAARFHSTGAYSRTLAHSGREAQVHLFT-VVPGTQSRYWGFRVIY 652
Query: 678 NEKMKVNSVFLKDSTAVSDSVLL 700
NE ++ + +++D TA+ + LL
Sbjct: 653 NEVIQTSKYYMRDVTAIESAWLL 675
Score = 357 (130.7 bits), Expect = 8.1e-70, Sum P(2) = 8.1e-70
Identities = 79/204 (38%), Positives = 123/204 (60%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R+ LP +K +N +L + Q V+I GETGCGK+TQ+PQ++ E+ T+ G V + TQ
Sbjct: 43 RQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTA-EGRVVGV--TQ 99
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLVDRNL 123
PRR++A++V+ RVA ERG LG VGY +R + TR+ F T G+L+R ++VD L
Sbjct: 100 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLL 159
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG----- 178
+ +++DE HER + D + +LK + +R +LRL++ SATLDAE F +F
Sbjct: 160 TKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETSD 219
Query: 179 -----ATVINIPGFTYPVRTHFLE 197
++ + G T+PV +L+
Sbjct: 220 PTRDTCVILTVEGRTFPVDIFYLQ 243
Score = 40 (19.1 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 226 KQAPRKR---KSQIASAVEDTLKAANF---NEYSSQTRES 259
K+ RKR + +ASA D K +F NE S TR++
Sbjct: 185 KKIQRKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDT 224
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 412 (150.1 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 109/419 (26%), Positives = 214/419 (51%)
Query: 283 KERPGA--VLVFMTGWDDINSLNDKLQ--ANRILGDPTRVLLLTCHGSMASSEQRLIFDE 338
+E P + +LVF+TG ++I +++ + A + +L+L + S+ ++Q +F
Sbjct: 283 QEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQG 342
Query: 339 PESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXX 398
G RK++++TNIAETSITI + +V+D G K Y+ + L +S
Sbjct: 343 APKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 402
Query: 399 XXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRAL 458
G CYRLY ++ F + +PEI R L S+ LQ+ ++++ + F +
Sbjct: 403 TGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSK 462
Query: 459 QSPELLAVQNAIEYLKIIGALDHNEE---LTVLGQYLAMLPMEPKLGKMLILGAIFNCLE 515
SP+ +Q AI L ++GAL+H ++ LT +G+ +A P+EPK K +++ F+C E
Sbjct: 463 PSPD--HIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTE 520
Query: 516 PVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGY- 574
+LTIV+ LSV P +++ + + +F DH+ L+ + +K+ L G
Sbjct: 521 EILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKN----LGGNK 576
Query: 575 EYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYP 634
++C +NF+++ +M ++ +R + L+D L I ++ G D +R + + L+
Sbjct: 577 DWCKENFVNSKNMTLVAEVRAQ----LRDICL-KMSMPIASSRG-DVESVRRCLAHSLFM 630
Query: 635 GISSIVQNGKSSSLKTMEDGQVFLYSNSV--NARESEIPYPWLVFNEKMKVNSVFLKDS 691
+ + +G ++ T + V ++ +SV + + + + Y L++ K + + + D+
Sbjct: 631 STAELQPDGTYATTDTHQP--VAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDA 687
Score = 372 (136.0 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 78/196 (39%), Positives = 125/196 (63%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
RR+LP ++ + +LL + ++ GETG GKTTQ+PQ++ E I+ R + ++ TQ
Sbjct: 71 RRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGIS--RQGIIAV--TQ 126
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++A+S++ RV+ E+ +LG+ VGY VR + + DTR+ F T G+LLR + D L+
Sbjct: 127 PRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLR 186
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPEL-----RLVLMSATLDAELFSSYFGGA 179
+ VI+DE HER ++ D L V+K RR EL ++++MSAT+D +LFS YF GA
Sbjct: 187 KYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGA 246
Query: 180 TVINIPGFTYPVRTHF 195
V+ + G +P++ +
Sbjct: 247 PVLYLEGRQHPIQVFY 262
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 423 (154.0 bits), Expect = 1.3e-69, Sum P(2) = 1.3e-69
Identities = 86/191 (45%), Positives = 126/191 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+LE R+ LP + + LLT I N +VI+ GETG GKTTQ+ Q++ E T G +
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDY-GMIG-- 581
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RV+ E G LGE VGY +R E T + + T GILLR L +
Sbjct: 582 -CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLRE 640
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L + +I+DE HER +N D L +L+++++RR +L+L++ SAT+DAE F+S+FG
Sbjct: 641 ADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVP 700
Query: 181 VINIPGFTYPV 191
+ +IPG T+PV
Sbjct: 701 IFHIPGRTFPV 711
Score = 372 (136.0 bits), Expect = 1.3e-69, Sum P(2) = 1.3e-69
Identities = 116/422 (27%), Positives = 202/422 (47%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVR 344
PG +L+FM G +DI +D++ + L + + +L + + S Q IF + GVR
Sbjct: 740 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 799
Query: 345 KIVLATNIAETSITINDVVFVIDCGKAK-ETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
K ++ATNIAETS+T++ ++FVID G K + S +L + + I +
Sbjct: 800 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIME-IQKIQKNINTGCSG 858
Query: 404 XVQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
P C RLY + Y + +PEI RT L ++ L +KSL + + F + P
Sbjct: 859 CTSP-RCCRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPP 915
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ N++ L I+GALD+ LT G+ + P++P L KMLI+ C +L IV+
Sbjct: 916 EDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVS 975
Query: 523 GLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFL 582
LSV F P +++ ++ + +F+ SDHL+ + + WK+ +C +F+
Sbjct: 976 MLSVPAIFYRPKGREEESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTI---WCNDHFI 1032
Query: 583 SAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQN 642
A +M+ + +R + LKD +V S+ + G D +R IC + + +
Sbjct: 1033 HAKAMRKVREVRAQ----LKDI-MVQQRMSLASC-GTDWDIVRKCICAAYFHQAAKLKGI 1086
Query: 643 GKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLL 701
G+ +++T G L+ S P ++V++E + +++ TAV L
Sbjct: 1087 GEYVNIRT---GMPCHLHPTSSLFGMGYTP-DYIVYHELVMTTKEYMQCVTAVDGEWLAE 1142
Query: 702 FG 703
G
Sbjct: 1143 LG 1144
Score = 41 (19.5 bits), Expect = 8.5e-35, Sum P(2) = 8.5e-35
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 225 SKQAPRKRKSQIASAVEDTLKAA 247
S+Q R+R + ASA+E+ + A
Sbjct: 1156 SRQENRRRAKEEASAMEEEMALA 1178
Score = 39 (18.8 bits), Expect = 5.5e-29, Sum P(2) = 5.5e-29
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 219 EKMWKMSKQAPRKRK 233
E+ W+ S+Q R+R+
Sbjct: 126 EEFWERSRQRERERR 140
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 413 (150.4 bits), Expect = 1.9e-69, Sum P(2) = 1.9e-69
Identities = 111/419 (26%), Positives = 218/419 (52%)
Query: 283 KERPGA--VLVFMTGWDDINSLNDKLQ-ANRILGD--PTRVLLLTCHGSMASSEQRLIFD 337
+E P + +LVF+TG ++I +++ + R L D P+ +L+L + S+ S+Q +F
Sbjct: 274 QEAPASQDILVFLTGQEEIEAMSKTCRDIARHLPDGCPS-MLVLPLYASLPYSQQLRVFQ 332
Query: 338 EPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXX 397
G RK++++TNIAETSITI + +V+D G K Y+ + L +S
Sbjct: 333 GAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQ 392
Query: 398 XXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRA 457
G CYRLY ++ F + +PEI R L S+ LQ+ ++++ + F +
Sbjct: 393 RTGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMS 452
Query: 458 LQSPELLAVQNAIEYLKIIGALDHNEE---LTVLGQYLAMLPMEPKLGKMLILGAIFNCL 514
SP+ ++ AI L ++GAL+H ++ LT +G+ +A P+EP+ K ++L + F+C
Sbjct: 453 KPSPD--HIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCT 510
Query: 515 EPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGY 574
E +LTIV+ LSV P ++D ++ + +F DH+ L+ + +K+ G
Sbjct: 511 EEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHITLLNIYRTFKNI--G-GNK 567
Query: 575 EYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYP 634
++C +NF+++ +M ++ +R + L++ L I ++ G D +R + + L+
Sbjct: 568 DWCKENFVNSKNMLLVAEVRAQ----LREICL-KMSMPIMSSRG-DMESVRRCMAHSLFM 621
Query: 635 GISSIVQNGKSSSLKTMEDGQVFLYSNSV--NARESEIPYPWLVFNEKMKVNSVFLKDS 691
+ + +G ++ T + V ++ +SV + + + + Y L++ K + + + D+
Sbjct: 622 NTAELQTDGTYATTDTHQP--VAIHPSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDA 678
Score = 368 (134.6 bits), Expect = 1.9e-69, Sum P(2) = 1.9e-69
Identities = 78/196 (39%), Positives = 124/196 (63%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
RR+LP ++ + +LL + ++ GETG GKTTQ+PQ++ E I+ R + ++ TQ
Sbjct: 62 RRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGIS--RQGIIAV--TQ 117
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++A+S++ RV+ E+ +LG+ VGY VR E + DTR+ F T G+LLR + D L+
Sbjct: 118 PRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLLR 177
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPEL-----RLVLMSATLDAELFSSYFGGA 179
+ VI+DE HER ++ D L V+K RR EL ++++MSAT+D +LFS YF A
Sbjct: 178 KYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNRA 237
Query: 180 TVINIPGFTYPVRTHF 195
V+ + G +P++ +
Sbjct: 238 PVLYLEGRQHPIQIFY 253
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 423 (154.0 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 115/441 (26%), Positives = 220/441 (49%)
Query: 265 PDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKL--QANRI--LGDPTRVLL 320
PD I + +E V+ I + E G +L F+TG +++ ++ L QA + G + +
Sbjct: 255 PDYIK-STVETVM-KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRV 312
Query: 321 LTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALN 380
L + + S EQ +F+ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRT 372
Query: 381 NTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCL 440
CL+ + +S S + G+CYRLY +D + +PE+ R+ L + L
Sbjct: 373 TIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVIL 432
Query: 441 QIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTV-LGQYLAMLPMEP 499
Q+K+L + + F + P ++ A+E L +G LD + LT LG +A P+ P
Sbjct: 433 QLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNP 490
Query: 500 KLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVR 559
KML+ F C + +L+I A + +++ F+ P ++K A +F+ + DHL ++
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEEGDHLTMLN 550
Query: 560 AFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGR 619
+E + + ++C ++FL+ + ++R++ LL V ++ G
Sbjct: 551 VYEAFIKHNKNS---QWCQEHFLNYKGLIRAATVREQLKKLL-----VKFQVPKKSSEGD 602
Query: 620 DERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNE 679
+ +R ++ G + + G S + + ++LY ++ R+ +++NE
Sbjct: 603 PDPVLRCIVS-GFFANAARFHSTGAYSVI--LSPHSLYLYYLTLFNRKF---LQKVIYNE 656
Query: 680 KMKVNSVFLKDSTAVSDSVLL 700
++ + +++D TA+ + LL
Sbjct: 657 VIQTSKYYMRDVTAIESAWLL 677
Score = 357 (130.7 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 79/204 (38%), Positives = 123/204 (60%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R+ LP +K +N +L + Q V+I GETGCGK+TQ+PQ++ E+ T+ G V + TQ
Sbjct: 51 RQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLVDRNL 123
PRR++A++V+ RVA ERG LG VGY +R + TR+ F T G+L+R ++VD L
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLL 167
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG----- 178
+ +++DE HER + D + +LK + +R +LRL++ SATLDAE F +F
Sbjct: 168 TKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETSD 227
Query: 179 -----ATVINIPGFTYPVRTHFLE 197
++ + G T+PV +L+
Sbjct: 228 PTRDTCVILTVEGRTFPVDIFYLQ 251
Score = 40 (19.1 bits), Expect = 4.3e-36, Sum P(2) = 4.3e-36
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 226 KQAPRKR---KSQIASAVEDTLKAANF---NEYSSQTRES 259
K+ RKR + +ASA D K +F NE S TR++
Sbjct: 193 KKIQRKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDT 232
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 424 (154.3 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 119/443 (26%), Positives = 220/443 (49%)
Query: 265 PDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKL--QANRI--LGDPTRVLL 320
PD I + +E + I + E G +L F+TG +++ ++ L QA + G + +
Sbjct: 255 PDYIK-STVETAM-KIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMRKHLRV 312
Query: 321 LTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALN 380
L + + S +Q +F+ VRK+++ATN+AETSITI+ + +VIDCG K +Y+
Sbjct: 313 LPMYAGLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKT 372
Query: 381 NTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCV--YDAFAEYQLPEILRTPLQSL 438
CL+ +S S + G+CYRLY ++ + +PE+ R+ L +
Sbjct: 373 AIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTATEEDFEKLPQSTVPEMQRSNLAPV 432
Query: 439 CLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTV-LGQYLAMLPM 497
LQ+K+L + + F L P ++ A+E L +G LD + LT LG +A P+
Sbjct: 433 ILQLKALGIDNVLRF--PFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPL 490
Query: 498 EPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLAL 557
P KML+ F C + +LTI A + +++ FL P ++K A +F+ + DHL +
Sbjct: 491 NPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFLIPPNQKSQAARQHRKFAVEEGDHLTM 550
Query: 558 VRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAW 617
+ +E + + ++C ++FL+ + V S+ +E L L LV ++
Sbjct: 551 LNVYEAFVKHSKSS---QWCQEHFLNYKGL-VRASVVREQLKKL----LVCFKVPKKSSE 602
Query: 618 GRDERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVF 677
G + +R ++ G + + G +++ +D ++ ++ SV E P W+V+
Sbjct: 603 GDPDPVLRCIVS-GFFANAAKFHSTGAYRTIR--DDHELHIHPTSVLYAEK--PPRWVVY 657
Query: 678 NEKMKVNSVFLKDSTAVSDSVLL 700
NE ++ +++D TA+ + L+
Sbjct: 658 NEVIQTAKYYMRDVTAIESAWLV 680
Score = 356 (130.4 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 78/204 (38%), Positives = 125/204 (61%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R+ LP +K +N +L + Q ++I GETGCGK+TQ+PQ++ E+ T+ G V + TQ
Sbjct: 51 RQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKG-RDTRLLFCTTGILLRRLLVDRNL 123
PRR++A+SV+ RVA ERG LG VGY +R + + TR+ F T G+L+R ++ D L
Sbjct: 108 PRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLL 167
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG----G- 178
+ +++DE HER + D + +LK + +R +LRL++ SATLDAE F +F G
Sbjct: 168 TRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTGD 227
Query: 179 -----ATVINIPGFTYPVRTHFLE 197
+ ++ + G T+PV +++
Sbjct: 228 PSKDTSVILTVEGRTFPVDIFYIQ 251
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 412 (150.1 bits), Expect = 2.1e-69, Sum P(2) = 2.1e-69
Identities = 115/428 (26%), Positives = 211/428 (49%)
Query: 283 KERPGAVLVFMTGWDDINSLNDKLQANRILGDP-TRVLL-LTCHGSMASSEQRLIFDEPE 340
+E G +L+F+TG ++I + + P ++ LL L + + + +Q +F+
Sbjct: 243 QEGEGDILIFLTGREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAP 302
Query: 341 SGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXX 400
RK+V++TNIAE S+TIN +V+V+DCG AK +YD L IS +
Sbjct: 303 ENTRKVVVSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAG 362
Query: 401 XXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQS 460
+PG+C+RLY + Y+ + +PEI R+ L + +Q+K+L + I F L S
Sbjct: 363 RAGRTKPGKCFRLYTQHAYEQLPDATIPEIQRSNLAPVIMQLKALGIDNIVRF--DFLTS 420
Query: 461 PELLAVQNAIEYLKIIGALDHNEELTV-LGQYLAMLPMEPKLGKMLILGAIFNCLEPVLT 519
P V A E L +GA+D +LT LG +A L ++P + K+L+ F CL +LT
Sbjct: 421 PPADLVIRAFELLYSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGCLSEILT 480
Query: 520 IVAGLSVRDPFLAPMD-KKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCW 578
I A +S++ D K +E+++ +F+ + DHL + ++ + +G ++C
Sbjct: 481 IAAMVSLQGAVWVQHDGDKKSSESSRRKFAVEEGDHLTYLNVYQAF--VTKGKKESKWCR 538
Query: 579 KNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDE-----RFIRAVICYGLY 633
N L+ S+ S+R + L+ G + D + + + + + I+ + G +
Sbjct: 539 DNLLNYRSLLRAVSVRAQLKRYLERFG-IQVDETFPSHYNKSDLSKPAEKIQRCLTTGYF 597
Query: 634 PGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNS-VFLKDST 692
+ + +G + KT+ G L+++ + + W++F+E M+ F++D T
Sbjct: 598 AHAARMQPDG---TFKTVSGGMT-LHAHPSSLMFNR-KADWVIFHEIMQTGEKTFIRDIT 652
Query: 693 AVSDSVLL 700
+ S LL
Sbjct: 653 KIEKSYLL 660
Score = 367 (134.2 bits), Expect = 2.1e-69, Sum P(2) = 2.1e-69
Identities = 90/205 (43%), Positives = 119/205 (58%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP + K +L + V I+ G+TG GKTTQ+PQ+ L+ G ++ TQPRR
Sbjct: 22 LPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQY-LDQAGWCTEGKAIAV--TQPRR 78
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVT 127
++A +V+ RVA E KLGE VGY +R E TR+ F T G+LLR LVD L +
Sbjct: 79 VAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPLLSRYS 138
Query: 128 HVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYF----------- 176
++VDE HER ++ D LL +LK +L RRPELR+++ SATL AE F YF
Sbjct: 139 VIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRYFAGDESQQGPNG 198
Query: 177 --GGAT--VINIPGFTYPVRTHFLE 197
GG T +I+I G YPV T FLE
Sbjct: 199 EVGGNTGKIISIEGRMYPVDTLFLE 223
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 400 (145.9 bits), Expect = 2.7e-69, Sum P(2) = 2.7e-69
Identities = 115/423 (27%), Positives = 210/423 (49%)
Query: 287 GAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVL-LLTCHGSMASSEQRLIFDEPESGVR 344
G +LVFMTG +DI + ++ + LG L LL + + S Q IF++ ++G R
Sbjct: 868 GDILVFMTGQEDIETTCATVEERIKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSR 927
Query: 345 KIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXX 404
K ++ATNIAETS+T++ +++VID G K Y+ L + IS +
Sbjct: 928 KCIIATNIAETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGR 987
Query: 405 VQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
PG CYRLY + + +PEI RT L ++ L +KS+ + + F + P
Sbjct: 988 TGPGRCYRLYTESAFKYELMDNNIPEIQRTNLGNVVLNLKSMGVKNLLDF--DFMDPPPQ 1045
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
+ N++ L ++GALD ++T LG+ ++ P++P L KM+I+ C + ++TIV+
Sbjct: 1046 DNILNSMYQLWVLGALDDQGQITPLGKRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVSM 1105
Query: 524 LSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGY--EYCWKNF 581
LS+ F P ++ ++A++ +F SDHL L+ ++ WK + Y ++C +++
Sbjct: 1106 LSMPSVFYRPKGAEEESDASREKFFVPESDHLTLLHVYQQWK-----INNYSSQWCAEHY 1160
Query: 582 LSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ 641
+ +M+ + +R + L ++ V D + + G + IR I + + I
Sbjct: 1161 IHIKAMRKVREVRGQLLDIM-----VQHDMKV-ESCGSNWDIIRKAITSSYFHHSAKIKG 1214
Query: 642 NGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
G+ + M +G FL+ S P ++V++E + + +++ TAV + L
Sbjct: 1215 IGEYVN---MRNGMPCFLHPTSALYGLGYAP-DYIVYHELVMTSKEYMQIVTAVDPNWLA 1270
Query: 701 LFG 703
G
Sbjct: 1271 EMG 1273
Score = 395 (144.1 bits), Expect = 2.7e-69, Sum P(2) = 2.7e-69
Identities = 83/189 (43%), Positives = 119/189 (62%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R LP + +N L+ I +N V+II GETG GKTTQ+ Q++ E + G I C
Sbjct: 654 EQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYEDGYSKF-G---KIGC 709
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++A+SV++RV+ E LG VGY +R E +T + + T GILLR D N
Sbjct: 710 TQPRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYMTDGILLRESFNDPN 769
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L + +I+DE HER +N D L +LK ++SRR +++L++ SAT+D++ FS +FG V
Sbjct: 770 LDKYSAIIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSATMDSKKFSMFFGDVPVF 829
Query: 183 NIPGFTYPV 191
IPG T+PV
Sbjct: 830 TIPGRTFPV 838
Score = 44 (20.5 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 214 DDYGQEKMWKMSKQAPRKRKSQIASAVEDTLKAANFNEYSSQTRES 259
DDY + ++ K++ K +S +S+ E T + +F + +S T +S
Sbjct: 58 DDYIIDDIYDKVKKSTNKNESNNSSSGERT--SLSFTKDTSTTTQS 101
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 413 (150.4 bits), Expect = 4.9e-69, Sum P(2) = 4.9e-69
Identities = 86/194 (44%), Positives = 126/194 (64%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R+ LP ++ K+ LL I +NQV+II GETG GKTTQ+PQ+++E T +G + I
Sbjct: 218 EARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTD-QGKL-QIAI 275
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRD-TRLLFCTTGILLRRLLVDR 121
TQPRR++A SV+ RVA E LG+ VGY++R E + T L + T G+LLR L D
Sbjct: 276 TQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDS 335
Query: 122 NLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATV 181
L + +++DE HER + D L+ +LKD+L +RP L+L++ SAT++A+ FS +F +
Sbjct: 336 KLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPI 395
Query: 182 INIPGFTYPVRTHF 195
N+PG YPV H+
Sbjct: 396 FNVPGRRYPVDIHY 409
Score = 371 (135.7 bits), Expect = 4.9e-69, Sum P(2) = 4.9e-69
Identities = 125/427 (29%), Positives = 205/427 (48%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQANRI-LGDPTRVLLLT-CHGSMASSEQRLIFDEPESGV 343
PG +LVF+TG ++I KL+ LG T+ +++T + ++ +Q IF
Sbjct: 435 PGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENC 494
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK+VLATNIAETS+TI+ + +VID G KE SY + LL S S
Sbjct: 495 RKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAG 554
Query: 404 XVQPGECYRLYPRCVYDAFAEYQL---PEILRTPLQSLCLQIKSLRLGTIAGFLSRALQS 460
V PG+C+R++ + Y E +L PEI RT L + L + SL + + F +
Sbjct: 555 RVGPGKCFRIFTKWSY--LHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKF--PLMDK 610
Query: 461 PELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFN-C---LEP 516
P + ++ ++E L I+GAL+ +T LG+ + P EP+ K+L A C LE
Sbjct: 611 PSIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEE 670
Query: 517 VLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEY 576
LTIV+ L P L K+D AA S S SDH+ + F W++++ + +
Sbjct: 671 CLTIVSMLH-ETPSLFIGQKRD---AAASVLSEVESDHILYLEIFNQWRNSKFSRS---W 723
Query: 577 CWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGI 636
C + + +M + ++R + + GLV+ + G +I A I G
Sbjct: 724 CQDHKIQFKTMLRVRNIRNQLFRCSEKVGLVEKNDQARMKIGNIAGYINARITRCFISGF 783
Query: 637 S-SIVQNGKSSSLKTM--EDG--QVFLYSNS---VNARE-SEIPYPWLVFNEKMKVNSVF 687
+IVQ G + +TM G V ++ S VN +E ++ P ++++ + M + F
Sbjct: 784 PMNIVQLGPTG-YQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEF 842
Query: 688 LKDSTAV 694
++D +
Sbjct: 843 IRDCLVI 849
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 405 (147.6 bits), Expect = 6.1e-69, Sum P(3) = 6.1e-69
Identities = 84/193 (43%), Positives = 122/193 (63%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E RR LP + + LL I +N V+II GETG GKTTQ+ Q++ E S RG + C
Sbjct: 529 EQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGY-SKRGMIG---C 584
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++AMSV++RV+ E +LGE VGY +R E T + + T GILLR L D
Sbjct: 585 TQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPE 644
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L + +I+DE HER ++ D L +L+++++RR +L+L++ SAT+D+ F+++FG
Sbjct: 645 LDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTF 704
Query: 183 NIPGFTYPVRTHF 195
IPG T+PV F
Sbjct: 705 TIPGRTFPVDVMF 717
Score = 394 (143.8 bits), Expect = 6.1e-69, Sum P(3) = 6.1e-69
Identities = 118/411 (28%), Positives = 196/411 (47%)
Query: 287 GAVLVFMTGWDDINSLNDKLQANRILGDPTRVL-LLTCHGSMASSEQRLIFDEPESGVRK 345
G +L+FM G +DI + L+ D L +L + + S Q IF + G+RK
Sbjct: 743 GDMLIFMPGQEDIEVTCEVLEERLAEIDNAPALSILPIYSQLPSDLQAKIFQKSSDGLRK 802
Query: 346 IVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXV 405
V+ATNIAETS+T++ +++VID G K Y+ L IS +
Sbjct: 803 CVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRT 862
Query: 406 QPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELL 464
PG+ YRLY + Y D +PEI RT L + L +KSL + + F + P
Sbjct: 863 GPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQF--HFMDPPPQD 920
Query: 465 AVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGL 524
+ N++ L I+GALDH LT LG+ +A P++P +MLI+ C VL IV+ L
Sbjct: 921 NILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSML 980
Query: 525 SVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSA 584
SV F P ++D A+ + +F SDHL + ++ W+ +C ++F+
Sbjct: 981 SVPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQNNYSST---WCNEHFIHI 1037
Query: 585 PSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
+M+ + +R++ LKD + + S+ + G D +R IC + + + G+
Sbjct: 1038 KAMRKVREVRQQ----LKDI-MTQQNLSVISC-GIDWDIVRKCICSAYFYQAARLKGIGE 1091
Query: 645 SSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAV 694
+L+T G L+ S P ++V++E + +++ +TAV
Sbjct: 1092 YVNLRT---GMPCHLHPTSALYGLGTTP-DYVVYHELIMTAKEYMQCATAV 1138
Score = 39 (18.8 bits), Expect = 6.1e-69, Sum P(3) = 6.1e-69
Identities = 9/19 (47%), Positives = 9/19 (47%)
Query: 798 PAFISRTESGPGGDNSKSQ 816
P F S ESG G K Q
Sbjct: 1148 PMFFSVKESGRSGREKKKQ 1166
Score = 37 (18.1 bits), Expect = 1.8e-30, Sum P(3) = 1.8e-30
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 94 RLEGMKGRDTR 104
RLEG G++TR
Sbjct: 11 RLEGTAGQETR 21
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 419 (152.6 bits), Expect = 7.3e-69, Sum P(2) = 7.3e-69
Identities = 115/427 (26%), Positives = 212/427 (49%)
Query: 283 KERPGA--VLVFMTGWDDINSLNDKLQ--ANRILGDPTRVLLLTCHGSMASSEQRLIFDE 338
+E P + +LVF+TG ++I ++ + A + ++ ++ + S+ S+Q +F
Sbjct: 233 QEAPSSQDILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQA 292
Query: 339 PESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXX 398
G RK++L+TNIAETSITI+ + +V+D G K Y+ L +S
Sbjct: 293 APKGCRKVILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQR 352
Query: 399 XXXXXXVQPGECYRLYPRCVYDAFAEYQLPEI---LRTPLQSLCLQIKSLRLGTIAGFLS 455
G CYRLY ++ F + +PEI R L S+ LQ+ +LR+ I F
Sbjct: 353 TGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQSLCRCNLASVLLQLLALRIPNILTFDF 412
Query: 456 RALQSPELLAVQNAIEYLKIIGALDHNEE---LTVLGQYLAMLPMEPKLGKMLILGAIFN 512
+ SP+ A+Q AIE L ++GA++ E+ LT LG+ +A P+EPK K ++L F+
Sbjct: 413 MSKPSPD--AIQAAIEQLDLLGAVEQKEDQLVLTPLGRKMAAFPLEPKFSKTILLSPKFH 470
Query: 513 CLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLA 572
C E +LTIV+ LSV P ++D ++ + +F DHL L+ + +K+
Sbjct: 471 CTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHLTLLNVYRAFKNVS---G 527
Query: 573 GYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGL 632
E+C +NF++ +M ++ +R + + + ++S D IR + + L
Sbjct: 528 NKEWCKENFVNGRNMMLVSDVRAQLRDICVKLSM-PMESS-----RSDTANIRRCLAHSL 581
Query: 633 YPGISSIVQNGKSSSLKTMEDGQVFLYSNSV--NARESEIPYPWLVFNEKMKVNSVFLKD 690
+ + + +G S++ + + V ++ +SV + + S + Y L+ K + + + D
Sbjct: 582 FMNAAELQPDGTYSTVNSHQ--LVAIHPSSVLFHCKPSCVVYNGLLHTNKCYMRDLCVVD 639
Query: 691 STAVSDS 697
+ + D+
Sbjct: 640 AEWLYDA 646
Score = 353 (129.3 bits), Expect = 7.3e-69, Sum P(2) = 7.3e-69
Identities = 75/196 (38%), Positives = 124/196 (63%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
RR LP ++ + LL+ + + ++ GETG GKTTQ+PQ++ E+ I R + ++ TQ
Sbjct: 21 RRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIG--RQGIIAV--TQ 76
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++A+S++ RV+ E+ +LG+ VGY VR + + +TR+ F T G+LLR + D L+
Sbjct: 77 PRRVAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPILR 136
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPEL-----RLVLMSATLDAELFSSYFGGA 179
+ VI+DE HER ++ D L V+K +R EL ++++MSAT+D + FS YF GA
Sbjct: 137 KYSVVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQYFNGA 196
Query: 180 TVINIPGFTYPVRTHF 195
V+ + G +P++ +
Sbjct: 197 PVLYLEGRQHPIQVFY 212
>UNIPROTKB|Q8NDG6 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031047 "gene silencing by
RNA" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0034587
"piRNA metabolic process" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISS] [GO:0009566 "fertilization" evidence=ISS]
[GO:0007140 "male meiosis" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0009566 GO:GO:0007283 GO:GO:0003676
GO:GO:0031047 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643 GO:GO:0008026
GO:GO:0071547 EMBL:AL136001 OMA:INDWFTI EMBL:AL132712 EMBL:AL833915
EMBL:AK093483 EMBL:AK097429 EMBL:AK097699 EMBL:AK125978
EMBL:BC016796 EMBL:BC128057 IPI:IPI00384419 IPI:IPI00413613
PIR:G02632 RefSeq:NP_694591.2 UniGene:Hs.21454
ProteinModelPortal:Q8NDG6 SMR:Q8NDG6 STRING:Q8NDG6
PhosphoSite:Q8NDG6 DMDM:290457664 PaxDb:Q8NDG6 PRIDE:Q8NDG6
Ensembl:ENST00000339063 Ensembl:ENST00000409874 GeneID:122402
KEGG:hsa:122402 UCSC:uc001yom.4 UCSC:uc001yon.4 CTD:122402
GeneCards:GC14P104394 HGNC:HGNC:20122 HPA:HPA038120
neXtProt:NX_Q8NDG6 PharmGKB:PA134890186 InParanoid:Q8NDG6
OrthoDB:EOG4F4S96 GenomeRNAi:122402 NextBio:80877 Bgee:Q8NDG6
CleanEx:HS_TDRD9 Genevestigator:Q8NDG6 Uniprot:Q8NDG6
Length = 1382
Score = 401 (146.2 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 109/294 (37%), Positives = 157/294 (53%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGV 343
ER +VLVF+ G +IN +++ L + ++ +V L H S+A EQ +F P G
Sbjct: 384 ER-SSVLVFLPGLGEINYMHELLTS--LVHKRLQVYPL--HSSVALEEQNNVFLSPVPGY 438
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RKI+L+TNIAE+S+T+ DV +VID + D N L SW S S
Sbjct: 439 RKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAG 498
Query: 404 XVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V G CYRL + +D + ++ +PE+LR PL S L++K L +G L+ AL P
Sbjct: 499 RVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPG 558
Query: 463 LLAVQNAIEYLKIIGAL----------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFN 512
L ++ I LK +GAL H+ ELT LG+ LA LP+ +LGK+++LG +F
Sbjct: 559 LSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFG 618
Query: 513 CLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFS-HDYSDHLALVRAFEGWK 565
CL+ L I A LS+++ F P + K FS SD +ALV AF+ WK
Sbjct: 619 CLDECLIIAAALSLKNFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAFKTWK 672
Score = 388 (141.6 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 84/213 (39%), Positives = 132/213 (61%)
Query: 7 NLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPR 66
+LP + K +++ I N VVII G TG GK+TQ+PQ+IL+ + R A CSI+ TQPR
Sbjct: 131 DLPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQ--RSAYCSIVVTQPR 188
Query: 67 RISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGV 126
+I A S++ ++ ER LG VGY+V LE + DTRL++ TTG+LL++++ ++L
Sbjct: 189 KIGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEF 248
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPE-LRLVLMSATLDAELFSSYFG-------- 177
TH+I+DEVHER DFLL+V++ LL +++VLMSAT+ + F+ YF
Sbjct: 249 THIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNKMN 308
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPY 210
A + + G + V ++L D+ + +L+P+
Sbjct: 309 PAYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPH 341
Score = 37 (18.1 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 321 LTCHGSMASSEQRLIFDEPESGVRKIVLA 349
L CH S+ R ++ E ES + ++++
Sbjct: 1158 LKCHSLTRISKFRCVWIEKES-INSVIIS 1185
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 428 (155.7 bits), Expect = 1.2e-68, Sum P(3) = 1.2e-68
Identities = 86/196 (43%), Positives = 129/196 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ + +LP YK K+ LL A+ N ++II GETG GKTTQ+ Q++ E E G +C
Sbjct: 472 LLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYE-EGYHRNGIIC-- 528
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++A+SV+ RV+ E +G VGY +R E +DT++ + T GILLR L D
Sbjct: 529 -CTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLND 587
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+ L + +I+DE HER +N D LL +LK++ +R +L+L++ SAT+DA+ FS++FG A
Sbjct: 588 KELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAP 647
Query: 181 VINIPGFTYPVRTHFL 196
+ NI G T+ V +L
Sbjct: 648 IYNIQGRTFKVHIEYL 663
Score = 351 (128.6 bits), Expect = 1.2e-68, Sum P(3) = 1.2e-68
Identities = 99/373 (26%), Positives = 177/373 (47%)
Query: 324 HGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTS 383
+ ++S +Q IF + + +RKI+++TNIAETS+T++ + +VID G K Y+
Sbjct: 778 YSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMD 835
Query: 384 CLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVY--DAFAEYQLPEILRTPLQSLCLQ 441
L + IS + G CYRLY + D + + +PEI R+ L ++ L
Sbjct: 836 VLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLY-QNNIPEIQRSNLSNVVLL 894
Query: 442 IKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKL 501
+KSL + + F + P ++ N++ L ++GA+++ LT +G+ + P++P L
Sbjct: 895 LKSLHVQNLFEF--DFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPPL 952
Query: 502 GKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAF 561
K++I F C + +L IV+ LS FL + + E+ K +F+ SDHL L+ +
Sbjct: 953 SKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVPESDHLTLLNIY 1012
Query: 562 EGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGL--VDCDTSICNAWGR 619
W+ Y +C KNF+ ++ + + + ++K + V CD N W
Sbjct: 1013 LQWRSHNYS---YSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCD----NKW-- 1063
Query: 620 DERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESE--IPYPWLVF 677
IR IC G + + + + +L+T V S+ N + + Y +VF
Sbjct: 1064 --ELIRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTPDYVIYQEIVF 1121
Query: 678 NEKMKVNSVFLKD 690
K + +V D
Sbjct: 1122 TTKEYMRNVTTVD 1134
Score = 53 (23.7 bits), Expect = 1.2e-68, Sum P(3) = 1.2e-68
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 287 GAVLVFMTGWDDINS 301
G +L+FMTG +DIN+
Sbjct: 693 GDILIFMTGQEDINA 707
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 428 (155.7 bits), Expect = 1.2e-68, Sum P(3) = 1.2e-68
Identities = 86/196 (43%), Positives = 129/196 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ + +LP YK K+ LL A+ N ++II GETG GKTTQ+ Q++ E E G +C
Sbjct: 472 LLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYE-EGYHRNGIIC-- 528
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++A+SV+ RV+ E +G VGY +R E +DT++ + T GILLR L D
Sbjct: 529 -CTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLND 587
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+ L + +I+DE HER +N D LL +LK++ +R +L+L++ SAT+DA+ FS++FG A
Sbjct: 588 KELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAP 647
Query: 181 VINIPGFTYPVRTHFL 196
+ NI G T+ V +L
Sbjct: 648 IYNIQGRTFKVHIEYL 663
Score = 351 (128.6 bits), Expect = 1.2e-68, Sum P(3) = 1.2e-68
Identities = 99/373 (26%), Positives = 177/373 (47%)
Query: 324 HGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTS 383
+ ++S +Q IF + + +RKI+++TNIAETS+T++ + +VID G K Y+
Sbjct: 778 YSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMD 835
Query: 384 CLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVY--DAFAEYQLPEILRTPLQSLCLQ 441
L + IS + G CYRLY + D + + +PEI R+ L ++ L
Sbjct: 836 VLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLY-QNNIPEIQRSNLSNVVLL 894
Query: 442 IKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKL 501
+KSL + + F + P ++ N++ L ++GA+++ LT +G+ + P++P L
Sbjct: 895 LKSLHVQNLFEF--DFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPPL 952
Query: 502 GKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAF 561
K++I F C + +L IV+ LS FL + + E+ K +F+ SDHL L+ +
Sbjct: 953 SKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVPESDHLTLLNIY 1012
Query: 562 EGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGL--VDCDTSICNAWGR 619
W+ Y +C KNF+ ++ + + + ++K + V CD N W
Sbjct: 1013 LQWRSHNYS---YSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCD----NKW-- 1063
Query: 620 DERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESE--IPYPWLVF 677
IR IC G + + + + +L+T V S+ N + + Y +VF
Sbjct: 1064 --ELIRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTPDYVIYQEIVF 1121
Query: 678 NEKMKVNSVFLKD 690
K + +V D
Sbjct: 1122 TTKEYMRNVTTVD 1134
Score = 53 (23.7 bits), Expect = 1.2e-68, Sum P(3) = 1.2e-68
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 287 GAVLVFMTGWDDINS 301
G +L+FMTG +DIN+
Sbjct: 693 GDILIFMTGQEDINA 707
>MGI|MGI:1921941 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009566 "fertilization" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IMP] [GO:0043046
"DNA methylation involved in gamete generation" evidence=IMP]
[GO:0071547 "piP-body" evidence=IDA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 MGI:MGI:1921941 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0030154 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0031047 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
EMBL:AC112520 OMA:INDWFTI CTD:122402 OrthoDB:EOG4F4S96
EMBL:AB362563 EMBL:AC132623 EMBL:BC115831 EMBL:BC116656
IPI:IPI00749982 IPI:IPI00849630 IPI:IPI00914159 RefSeq:NP_083332.1
UniGene:Mm.60648 ProteinModelPortal:Q14BI7 SMR:Q14BI7 STRING:Q14BI7
PhosphoSite:Q14BI7 PaxDb:Q14BI7 PRIDE:Q14BI7
Ensembl:ENSMUST00000079009 GeneID:74691 KEGG:mmu:74691
UCSC:uc007pei.1 UCSC:uc007pej.1 UCSC:uc011yva.1
HOGENOM:HOG000047965 HOVERGEN:HBG072266 InParanoid:B1Q3J8
NextBio:341402 Bgee:Q14BI7 Genevestigator:Q14BI7 Uniprot:Q14BI7
Length = 1383
Score = 421 (153.3 bits), Expect = 1.4e-68, Sum P(3) = 1.4e-68
Identities = 114/300 (38%), Positives = 158/300 (52%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGV 343
ER +VLVF+ G +IN +++ L N I R+ + H S+ EQ +F P G
Sbjct: 385 ER-SSVLVFLPGLGEINYMHELL-TNMI---HKRLQVYPLHSSVTLEEQNNVFLSPVPGY 439
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RKI+L+TNIAE+S+T+ DV +VID + D N L SW S S
Sbjct: 440 RKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAG 499
Query: 404 XVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V G CYRL PR +D A ++ +PE+LR PL S L++K L +G L+ AL P
Sbjct: 500 RVSKGYCYRLIPRDFWDSAIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPS 559
Query: 463 LLAVQNAIEYLKIIGAL----------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFN 512
L ++ I LK +GAL H+ ELT LG+ LA LP+ +LGK+++LG +F
Sbjct: 560 LSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLVVLGHVFG 619
Query: 513 CLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFS-HDYSDHLALVRAFEGWKDA-ERG 570
CL+ L I A LS+++ F P + K FS SD LALV AF W+ +RG
Sbjct: 620 CLDECLIIAAALSLKNFFTMPFRQHLDGYRNKVHFSGSSRSDCLALVEAFRAWQACRQRG 679
Score = 372 (136.0 bits), Expect = 1.4e-68, Sum P(3) = 1.4e-68
Identities = 80/202 (39%), Positives = 126/202 (62%)
Query: 7 NLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPR 66
+LP + K +++ I N VVII G TG GK+TQ+PQ++L+ T R A C+I+ TQPR
Sbjct: 133 DLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLD-HYTQ-RSAFCNIVVTQPR 190
Query: 67 RISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGV 126
+I A S++ ++ ER LG VGY+V LE + DTRL++ TTG+LL++++ ++L
Sbjct: 191 KIGASSIARWISKERSWTLGGLVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEF 250
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPE-LRLVLMSATLDAELFSSYFG-------- 177
TH+ +DEVHER DFLL+V++ LL +++VLMSAT++ + F+ YF
Sbjct: 251 THIFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATINCKQFADYFAVPVQNKMN 310
Query: 178 GATVINIPGFTYPVRTHFLEDI 199
A V + G + + ++L D+
Sbjct: 311 PAYVFEVEGKPHAIEEYYLNDL 332
Score = 45 (20.9 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 18/77 (23%), Positives = 33/77 (42%)
Query: 311 ILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGK 370
+L P L CH S+ R ++ E ES + +V++ + A+ ++ + V
Sbjct: 1149 VLHGPFNPYELKCHSLTRISKFRCVWIEKES-INSVVISDSPAD----LHQRMLVAASLS 1203
Query: 371 AKETSYDALNNTSCLLP 387
ET L + L+P
Sbjct: 1204 VNETGSTMLLRETSLMP 1220
Score = 43 (20.2 bits), Expect = 1.4e-68, Sum P(3) = 1.4e-68
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 676 VFNEKMKVNSVFLKDSTAVSDSVLLLFGGSISQGE 710
V+ EK +NSV + DS A +L+ S+S E
Sbjct: 1173 VWIEKESINSVVISDSPADLHQRMLV-AASLSVNE 1206
Score = 41 (19.5 bits), Expect = 5.0e-34, Sum P(3) = 5.0e-34
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 205 YRLTPYNQIDDYGQEKMWK-MSKQAPRKRKSQIASAVEDTLK 245
YR ++D YGQ++ ++P + S +A E T K
Sbjct: 89 YRQLEEQELDIYGQDQPPSGPGLRSPLAKLSNVACIPETTYK 130
>RGD|1306942 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0007140 "male meiosis" evidence=ISO;ISS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=ISO;ISS] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009566
"fertilization" evidence=ISO;ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0034587 "piRNA metabolic process"
evidence=ISO;ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISO;ISS] [GO:0071547 "piP-body"
evidence=ISO;ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR002999
RGD:1306942 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0030154
GO:GO:0009566 GO:GO:0007283 GO:GO:0003676 GO:GO:0031047
GO:GO:0007140 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0043046 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0034587 eggNOG:COG1643 GeneTree:ENSGT00700000104393
GO:GO:0008026 GO:GO:0071547 CTD:122402 OrthoDB:EOG4F4S96
HOGENOM:HOG000047965 EMBL:AABR03050289 EMBL:AABR03048647
EMBL:AABR03049552 EMBL:AABR03049859 EMBL:AABR03050293
EMBL:AABR03051941 EMBL:BC104675 IPI:IPI00655293 IPI:IPI00895578
RefSeq:XP_001072421.2 UniGene:Rn.126122 STRING:Q3MHU3 PRIDE:Q3MHU3
Ensembl:ENSRNOT00000017118 GeneID:299343 KEGG:rno:299343
UCSC:RGD:1306942 NextBio:645254 Genevestigator:Q3MHU3
Uniprot:Q3MHU3
Length = 1384
Score = 413 (150.4 bits), Expect = 5.4e-68, Sum P(3) = 5.4e-68
Identities = 113/300 (37%), Positives = 157/300 (52%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGV 343
ER +VLVF+ G +IN +++ L N I R+ + H S+ EQ +F P G
Sbjct: 386 ER-SSVLVFLPGLGEINYMHELL-TNMI---HKRLQVYPLHSSVTLEEQNNVFLSPVPGY 440
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RKI+L+TNIAE+S+T+ DV +VID + D N L SW S S
Sbjct: 441 RKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAG 500
Query: 404 XVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V G CYRL R +D A ++ +PE+LR PL S L++K L +G L+ AL P
Sbjct: 501 RVSKGYCYRLIHRDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLDMGEPRALLATALSPPS 560
Query: 463 LLAVQNAIEYLKIIGAL----------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFN 512
L ++ I LK +GAL H+ ELT LG+ LA LP+ +LGK+++LG +F
Sbjct: 561 LSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVFG 620
Query: 513 CLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFS-HDYSDHLALVRAFEGWKDA-ERG 570
CL+ L I A LS+++ F P + K FS SD LALV AF W+ +RG
Sbjct: 621 CLDECLIIAAALSLKNFFTMPFRQHLDGYRNKVHFSGSSRSDCLALVEAFRAWQACRQRG 680
Score = 375 (137.1 bits), Expect = 5.4e-68, Sum P(3) = 5.4e-68
Identities = 83/213 (38%), Positives = 129/213 (60%)
Query: 7 NLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPR 66
+LP + K +++ I N VVII G TG GK+TQ+PQ++L+ T R A C+I+ TQPR
Sbjct: 133 DLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLD-HYTQ-RSAFCNIVVTQPR 190
Query: 67 RISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGV 126
+I A S++ ++ ER LG VGY+V LE DTRL++ TTG+LL++++ ++L
Sbjct: 191 KIGASSIARWISKERSWTLGGLVGYQVGLEKTATEDTRLIYMTTGVLLQKIVSAKSLMEF 250
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPE-LRLVLMSATLDAELFSSYFG-------- 177
THV +DEVHER DFLL+V++ LL ++++LMSAT++ + F+ YF
Sbjct: 251 THVFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVILMSATINCKQFADYFAVPVQNKMN 310
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPY 210
A V + G + + ++L D+ + L PY
Sbjct: 311 PAYVFEVEGKPHTIEQYYLNDLGHIYHSGLPPY 343
Score = 45 (20.9 bits), Expect = 9.1e-30, Sum P(2) = 9.1e-30
Identities = 18/77 (23%), Positives = 33/77 (42%)
Query: 311 ILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGK 370
+L P L CH S+ R ++ E ES + +V++ + A+ ++ + V
Sbjct: 1150 VLHGPFNPYELKCHSLTRISKFRCVWIEKES-INSVVISDSPAD----LHQRMLVAASLS 1204
Query: 371 AKETSYDALNNTSCLLP 387
ET L + L+P
Sbjct: 1205 VNETGSTMLLRETSLMP 1221
Score = 43 (20.2 bits), Expect = 5.4e-68, Sum P(3) = 5.4e-68
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 676 VFNEKMKVNSVFLKDSTAVSDSVLLLFGGSISQGE 710
V+ EK +NSV + DS A +L+ S+S E
Sbjct: 1174 VWIEKESINSVVISDSPADLHQRMLV-AASLSVNE 1207
Score = 40 (19.1 bits), Expect = 5.0e-33, Sum P(3) = 5.0e-33
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 205 YRLTPYNQIDDYGQEKMWK-MSKQAPRKRKSQIASAVEDTLK 245
YR ++D YGQ++ ++P + S +A E T K
Sbjct: 89 YRQLEAQELDIYGQDQPPSGPGLRSPLAKISNVACIPETTYK 130
Score = 38 (18.4 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 8/24 (33%), Positives = 9/24 (37%)
Query: 363 VFVIDCGKAKETSYDALNNTSCLL 386
VF +D G D L C L
Sbjct: 980 VFFVDYGNRSHVDLDLLREIPCQL 1003
>ZFIN|ZDB-GENE-090313-193 [details] [associations]
symbol:tdrd9 "tudor domain containing 9"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0009566
"fertilization" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034587 "piRNA metabolic process" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 ZFIN:ZDB-GENE-090313-193
GO:GO:0005524 GO:GO:0003676 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 GO:GO:0008026 EMBL:BX072537
IPI:IPI00488074 Ensembl:ENSDART00000124958 Bgee:F1RA66
Uniprot:F1RA66
Length = 1344
Score = 401 (146.2 bits), Expect = 9.3e-68, Sum P(3) = 9.3e-68
Identities = 105/291 (36%), Positives = 158/291 (54%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGV 343
ER G+VLVF+ G +I + + L ++++ +V L H ++ EQ +F P G
Sbjct: 345 ER-GSVLVFLPGLAEIQYMKEAL--SKLVRKRLQVYPL--HSTVTLEEQNGVFLVPVPGY 399
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RKI+L+TNIAE+S+T+ DV +VID ++ + D N CL +W S S
Sbjct: 400 RKIILSTNIAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGRAG 459
Query: 404 XVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V G CYRL R ++ + +PE+LR+PL S L++K L +G LS AL P
Sbjct: 460 RVSKGFCYRLVTRHFWENEIPNFSIPEMLRSPLASTLLKVKLLDMGDPRSVLSTALTPPI 519
Query: 463 LLAVQNAIEYLKIIGALD--HNEE------LTVLGQYLAMLPMEPKLGKMLILGAIFNCL 514
L ++ + LK IGAL N + LT LG+ LA LP++ +LGK+++LG +F CL
Sbjct: 520 LGDIERTVLQLKQIGALSVQSNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVLGHVFGCL 579
Query: 515 EPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDY-SDHLALVRAFEGW 564
E L I A LS++ F P ++ +K F+ + SD +A V AF+ W
Sbjct: 580 EECLIIAASLSLKSFFAMPSLQQLAGYRSKLSFAQNVPSDFIAYVNAFKAW 630
Score = 390 (142.3 bits), Expect = 9.3e-68, Sum P(3) = 9.3e-68
Identities = 91/229 (39%), Positives = 135/229 (58%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP K + L++ I N VVII G TG GKTTQ+PQFIL+ + R C+++ TQPR+
Sbjct: 89 LPITKNRQELVSLIENNSVVIIRGATGSGKTTQLPQFILDHY--AERNIPCNLVVTQPRK 146
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVT 127
I A S++ VA ER LG VGY+V LE M T+L++ TTG+LL++L+ + L +
Sbjct: 147 IGATSIARWVARERKCTLGSLVGYQVGLEKMATEHTKLIYVTTGVLLQKLVSSKTLTEYS 206
Query: 128 HVIVDEVHERGMNEDFLLIVLKDLL-SRRPELRLVLMSATLDAELFSSYFGG-------- 178
H+ +DEVHER DFLL+V++ LL S ++++LMSAT++ F+ YFG
Sbjct: 207 HIFIDEVHERSEELDFLLLVVRKLLRSNSRYVKVILMSATINCIEFAEYFGSPIRNQMNP 266
Query: 179 ATVINIPGFTYPVRTHFLEDILDM--TGYRLTPYNQIDDYGQEKMWKMS 225
A V + G Y V ++L+++ M G L D Y E+M+ ++
Sbjct: 267 AYVFEVEGAPYAVEEYYLDELKTMLPVGVNLDLTLPQDPYITEEMYNVA 315
Score = 38 (18.4 bits), Expect = 9.3e-68, Sum P(3) = 9.3e-68
Identities = 9/15 (60%), Positives = 9/15 (60%)
Query: 701 LFGGSISQGEIDGHL 715
LF SQGEID L
Sbjct: 707 LFPNYFSQGEIDEQL 721
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 396 (144.5 bits), Expect = 3.1e-67, Sum P(3) = 3.1e-67
Identities = 100/342 (29%), Positives = 177/342 (51%)
Query: 265 PDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKL--QANRIL--GDPTRVLL 320
PD I + +E V+ I + E G VL F+TG +++ ++ L QA + G + +
Sbjct: 255 PDYIK-STVETVV-KIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRV 312
Query: 321 LTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALN 380
L + + S EQ +F+ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRT 372
Query: 381 NTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCL 440
CL+ +S S + G+CYRLY +D + +PE+ R+ L + L
Sbjct: 373 AIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVIL 432
Query: 441 QIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTV-LGQYLAMLPMEP 499
Q+K+L + + F + P ++ A+E L +G LD + LT LG +A P+ P
Sbjct: 433 QLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNP 490
Query: 500 KLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVR 559
KML+ F C + +L+I A + +++ F+ P ++K A +F+ + DHL ++
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLN 550
Query: 560 AFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLL 601
+E + + ++C ++FL+ + ++R++ LL
Sbjct: 551 IYEAFIKHNKDS---KWCQEHFLNYKGLVRAATVREQLKKLL 589
Score = 360 (131.8 bits), Expect = 3.1e-67, Sum P(3) = 3.1e-67
Identities = 79/204 (38%), Positives = 124/204 (60%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R+ LP +K +N +L I Q V+I GETGCGK+TQ+PQ++ E+ T+ G V + TQ
Sbjct: 51 RQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLVDRNL 123
PRR++A++V+ RVA ERG LG VGY +R + + TR+ F T G+L+R ++VD L
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLL 167
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG----- 178
+ +++DE HER + D + +LK + +R +LRL++ SATLDA+ F +F
Sbjct: 168 TKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSD 227
Query: 179 -----ATVINIPGFTYPVRTHFLE 197
++ + G T+PV +L+
Sbjct: 228 PARDTCVILTVEGRTFPVDIFYLQ 251
Score = 47 (21.6 bits), Expect = 3.1e-67, Sum P(3) = 3.1e-67
Identities = 7/26 (26%), Positives = 18/26 (69%)
Query: 675 LVFNEKMKVNSVFLKDSTAVSDSVLL 700
+++NE ++ + +++D TA+ + LL
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLL 654
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 401 (146.2 bits), Expect = 4.1e-67, Sum P(2) = 4.1e-67
Identities = 85/195 (43%), Positives = 130/195 (66%)
Query: 6 RNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQP 65
+ LP Y+ K++L+ A+ +N +I++GETG GKTTQ+PQ++ ++ ++ R + TQP
Sbjct: 16 KKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLS--RNGRIGV--TQP 71
Query: 66 RRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKG 125
RR++A++V++RV+SE +LGE VGY+VR + +DT + + T G LLR +L D +L
Sbjct: 72 RRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREILADPSLTQ 131
Query: 126 VTHVIVDEVHERGMNEDFLLIVLKDLL---SR--RPELRLVLMSATLDAELFSSYFGGAT 180
+ VI+DE HER +N D LL +LK L SR + L++V+MSATL+ E SS++G
Sbjct: 132 YSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLSSFYGNCP 191
Query: 181 VINIPGFTYPVRTHF 195
V IPG TYPV+ F
Sbjct: 192 VFTIPGRTYPVKETF 206
Score = 361 (132.1 bits), Expect = 4.1e-67, Sum P(2) = 4.1e-67
Identities = 115/421 (27%), Positives = 197/421 (46%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKL-QANRILG------DPT--RVLLLTCHGSMASSEQRL 334
E G +LVF+TG +I D L + IL D + +L+L+ +GSM + +QR
Sbjct: 235 EAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDGLLILSLYGSMPTDQQRQ 294
Query: 335 IFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVS 394
IF GVRK V+ATNIA TS+TI+ + +++D G K+ ++++ L IS
Sbjct: 295 IFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDILEVVPISKSE 354
Query: 395 XXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGTIAGF 453
G+C+R+Y + +D EY +PEI RT L S+ L +K L + + F
Sbjct: 355 AQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLTSVILTLKCLGVHDVIRF 414
Query: 454 LSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNC 513
L PE + A++ L A+D E+T LG+ + P+ P L + L+ A C
Sbjct: 415 --PYLDCPEERFILTALKQLYQYDAIDRRGEVTKLGRLMVEFPLPPNLTRALLKAAALGC 472
Query: 514 LEPVLTIVAGLSVRDPFLAP--MDKKDLAEAAKSQF---SHDYSDHLALVRAFEGWKDAE 568
+ +L + A LSV + F+ P +K+ AE + S +D L L+ FE + +E
Sbjct: 473 EDIMLPVAAMLSVENIFIRPGKPEKQKEAEVRHKEIAACSGGSNDFLMLLCVFEKCRASE 532
Query: 569 RGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVI 628
A + W ++ + S +++ +E L LK D G +R +
Sbjct: 533 NPSAWCKENWIHWRAVKSAFSVETQLREILLRLKQQK----DFPHERFEGSRSELLRQCL 588
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFL 688
C G + ++ GKS V ++ +S + E+ W++F++ + + V++
Sbjct: 589 CLGYFTNVARR-SIGKSFCTMDGHGSSVLIHPSSCLFGQ-ELQLDWIIFHDVLVTSRVYV 646
Query: 689 K 689
+
Sbjct: 647 R 647
>FB|FBgn0003483 [details] [associations]
symbol:spn-E "spindle E" species:7227 "Drosophila
melanogaster" [GO:0007315 "pole plasm assembly" evidence=NAS]
[GO:0030720 "oocyte localization involved in germarium-derived egg
chamber formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0009951 "polarity specification of dorsal/ventral
axis" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0009949 "polarity specification of anterior/posterior axis"
evidence=IMP] [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0008298 "intracellular mRNA
localization" evidence=IMP;TAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase
activity" evidence=TAS] [GO:0006403 "RNA localization"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0003724
"RNA helicase activity" evidence=TAS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0009994 "oocyte differentiation"
evidence=NAS] [GO:0001556 "oocyte maturation" evidence=IMP]
[GO:0030423 "targeting of mRNA for destruction involved in RNA
interference" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
localization" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007317 "regulation of pole plasm oskar
mRNA localization" evidence=IMP] [GO:0016246 "RNA interference"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0046843
"dorsal appendage formation" evidence=IMP] [GO:0010529 "negative
regulation of transposition" evidence=IMP] [GO:0043186 "P granule"
evidence=IDA] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 EMBL:AE014297 GO:GO:0005524
GO:GO:0005634 GO:GO:0007126 GO:GO:0009949 GO:GO:0007294
GO:GO:0008270 GO:GO:0007283 GO:GO:0003676 GO:GO:0006342
GO:GO:0030423 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0007076 GO:GO:0001556 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0046843 GO:GO:0030720 GO:GO:0030717
eggNOG:COG1643 GeneTree:ENSGT00700000104393 GO:GO:0060213
GO:GO:0008026 GO:GO:0045451 GO:GO:0003724 GO:GO:0043186
GO:GO:0007317 GO:GO:0008186 GO:GO:0009951 EMBL:S79915 EMBL:BT029921
EMBL:BT100306 PIR:T13889 RefSeq:NP_476741.1 UniGene:Dm.21664
ProteinModelPortal:Q9VF26 SMR:Q9VF26 STRING:Q9VF26 PaxDb:Q9VF26
PRIDE:Q9VF26 EnsemblMetazoa:FBtr0083183 GeneID:41919
KEGG:dme:Dmel_CG3158 UCSC:CG3158-RA CTD:41919 FlyBase:FBgn0003483
InParanoid:Q9VF26 OMA:INDWFTI OrthoDB:EOG4V6WXM PhylomeDB:Q9VF26
GenomeRNAi:41919 NextBio:826268 Bgee:Q9VF26 Uniprot:Q9VF26
Length = 1434
Score = 419 (152.6 bits), Expect = 8.1e-67, Sum P(2) = 8.1e-67
Identities = 97/230 (42%), Positives = 143/230 (62%)
Query: 6 RNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQP 65
+NL Y ++ +L AI+ + VVII GETGCGKTTQVPQ+IL+ S G C+I+ TQP
Sbjct: 113 KNLSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKS--GKYCNIVVTQP 170
Query: 66 RRISAMSVSERVASERGEKLGESVGYKVRLEGMKG-RDTRLLFCTTGILLRRLLVDRNLK 124
RRI+A+S++ RV ER + ++V L DTRLL+CTTG+LL L+ ++ L
Sbjct: 171 RRIAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNKTLT 230
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE-LRLVLMSATLDAELFSSYFGGATVIN 183
TH+++DEVHER N DFLLIV++ LL+ ++++LMSAT+DA+ S YF T +
Sbjct: 231 HYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYF--TTTNS 288
Query: 184 IPGF--TYPVRTHFLEDIL-DMTGYRLTPYNQIDDYGQEKMWKMSKQAPR 230
IP T R H +E D G + +N+ +D G +++ +++K R
Sbjct: 289 IPPVITTNHRRKHSIEKFYRDQLGSII--WNE-EDVGHQQVPEINKHGYR 335
Score = 352 (129.0 bits), Expect = 8.1e-67, Sum P(2) = 8.1e-67
Identities = 93/272 (34%), Positives = 142/272 (52%)
Query: 282 EKERPGAVLVFMTGWDDINSLNDKLQANRILGDPT-RVLLLTCHGSMASSEQRLIFDEPE 340
E R GAVL+F+ G +I+++ + L + DP +V ++ C M QR +F+ P
Sbjct: 361 EALRYGAVLIFLPGIYEIDTMAENLTC-MLENDPNIKVSIVRCFSLMTPENQRDVFNPPP 419
Query: 341 SGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXX 400
G RKI+L TNIAE+SIT+ DV +VID AK D ++ S L +W S +
Sbjct: 420 PGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAG 479
Query: 401 XXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQ 459
++ G YR+ + Y E+ +PE+LR PLQ+ L+ K L +G+ L+ AL
Sbjct: 480 RVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEILALALS 539
Query: 460 SPELLAVQNAIEYLKIIGAL----DH-----NEELTVLGQYLAMLPMEPKLGKMLILGAI 510
P L + N I LK +GAL D + +LT G ++ LP++ + +++ILG I
Sbjct: 540 PPNLSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYI 599
Query: 511 FNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEA 542
FN LE + I AGLS F + L ++
Sbjct: 600 FNMLEEAIIIAAGLSTPGLFAHEGGRSQLGDS 631
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 390 (142.3 bits), Expect = 1.3e-66, Sum P(3) = 1.3e-66
Identities = 93/327 (28%), Positives = 169/327 (51%)
Query: 280 ICEKERPGAVLVFMTGWDDINSLNDKL--QANRIL--GDPTRVLLLTCHGSMASSEQRLI 335
I + E G +L F+TG +++ ++ L QA + G + +L + + S EQ +
Sbjct: 268 IHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKV 327
Query: 336 FDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSX 395
F+ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+ CL+ +S S
Sbjct: 328 FERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASA 387
Query: 396 XXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLS 455
+ G+CYRLY ++ + +PE+ R+ L + LQ+K+L + ++ F
Sbjct: 388 NQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRF-- 445
Query: 456 RALQSPELLAVQNAIEYLKIIGALDHNEELTV-LGQYLAMLPMEPKLGKMLILGAIFNCL 514
+ P ++ A+E L +G LD + LT LG +A P+ P KML+ F C
Sbjct: 446 HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCS 505
Query: 515 EPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGY 574
+ +L+I A + +++ F+ P ++K A +F+ + DHL ++ +E + +
Sbjct: 506 QEILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEAFIKHNKSS--- 562
Query: 575 EYCWKNFLSAPSMKVIDSLRKEFLSLL 601
++C ++FL+ + ++R + LL
Sbjct: 563 QWCQEHFLNYKGLVRAATVRDQLKKLL 589
Score = 361 (132.1 bits), Expect = 1.3e-66, Sum P(3) = 1.3e-66
Identities = 81/204 (39%), Positives = 123/204 (60%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R+ LP +K +N +L + Q V+I GETGCGK+TQVPQ++ E+ T+ G V + TQ
Sbjct: 51 RQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLVDRNL 123
PRR++A++V+ RVA ERG LG VGY +R + TR+ F T G+L+R ++VD L
Sbjct: 108 PRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLL 167
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG----- 178
+ V++DE HER + D + +LK + +R +LRL++ SATLDAE F +F
Sbjct: 168 TKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSD 227
Query: 179 -----ATVINIPGFTYPVRTHFLE 197
++ + G T+PV +L+
Sbjct: 228 PARDTCVILTVEGRTFPVDIFYLQ 251
Score = 47 (21.6 bits), Expect = 1.3e-66, Sum P(3) = 1.3e-66
Identities = 7/26 (26%), Positives = 18/26 (69%)
Query: 675 LVFNEKMKVNSVFLKDSTAVSDSVLL 700
+++NE ++ + +++D TA+ + LL
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLL 654
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 385 (140.6 bits), Expect = 2.0e-66, Sum P(2) = 2.0e-66
Identities = 117/437 (26%), Positives = 207/437 (47%)
Query: 282 EKERPGAVLVFMTGWDDINSLNDKLQANRI-LGDPTRVLL-LTCHGSMASSEQRLIFDEP 339
E E G +LVF+TG D+I + D + L R LL L +++ +Q IF+E
Sbjct: 242 ENEPDGDILVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQMYIFEEA 301
Query: 340 ESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXX 399
+ RK++ +TNIAE S+TI+ +V+V+D G K +Y+ L IS +
Sbjct: 302 PANTRKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRA 361
Query: 400 XXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQ 459
+PG+C+RLY Y + ++ +PE+ R+ L LQ+K+L + + F L
Sbjct: 362 GRAGRTKPGKCFRLYTEESYTSLSDTNIPEVQRSNLAPFILQLKALGIDNVLHF--DFLT 419
Query: 460 SPELLAVQNAIEYLKIIGALDHNEELTV-LGQYLAMLPMEPKLGKMLILGAIFNCLEPVL 518
P + A+E L +GALD +LT LG +A L ++P + K L+ F CL +L
Sbjct: 420 PPPAELMTKALELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAESFGCLSEML 479
Query: 519 TIVAGLSVR-DPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYC 577
TI A S D ++ ++ E+ + +F+ DHL + ++ + R +G+ C
Sbjct: 480 TIAAMTSAGGDVWIQHEGERKQFESRRRKFAAGEGDHLTFLNVYQAFVTKGRKESGF--C 537
Query: 578 WKNFLSAPSMKVIDSLRKEFLSLLKDTGL-VDCDTSICNAWGRDERF----IRAVICYGL 632
+N L+ +M S+R + L+ G+ VD + G IR + G
Sbjct: 538 HENLLNYKTMSRAVSIRAQLKRYLERFGIRVDETLASGKTRGASPGVTGEQIRRCLTTGY 597
Query: 633 YPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNS-VFLKDS 691
+ + + +G + +T++ G L+++ + + W++F+E M+ + F++D
Sbjct: 598 FAHAARMQADG---TFQTVQGGTT-LHAHPSSLMFNR-KADWVIFHEVMETGAKTFIRDI 652
Query: 692 TAVSDSVLLLFGGSISQ 708
+ V LL + Q
Sbjct: 653 SKVEKCWLLEYAPDFYQ 669
Score = 369 (135.0 bits), Expect = 2.0e-66, Sum P(2) = 2.0e-66
Identities = 84/206 (40%), Positives = 126/206 (61%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP + K+ LL + N V ++ G+TG GKTTQ+PQF+ ++ S G + + TQPRR
Sbjct: 21 LPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCS-DGKLIGV--TQPRR 77
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVT 127
I+A +V+ RVA E G ++G+ VGY +R E + TR+ F T G+L+R LVD L +
Sbjct: 78 IAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALVDPLLSRYS 137
Query: 128 HVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYF----GGA---- 179
V+VDE HER ++ D LL +LK + +RPELR+++ SATL AE F ++F GG+
Sbjct: 138 IVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSSTLGGSRQDR 197
Query: 180 --------TVINIPGFTYPVRTHFLE 197
T++++ G TYP+ +LE
Sbjct: 198 EEPQGTIGTIVSLEGRTYPIDILYLE 223
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 395 (144.1 bits), Expect = 3.3e-66, Sum P(2) = 3.3e-66
Identities = 88/217 (40%), Positives = 131/217 (60%)
Query: 7 NLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPR 66
NLP ++K +L AI +QVVI++GETG GKTTQ+P+ +E ++G + TQPR
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG-RGIKGLIGH---TQPR 131
Query: 67 RISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGV 126
R++A +V+ R+A E + G +GYKVR +T + T GILL + DR L
Sbjct: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQY 191
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+I+DE HER +N DFLL LK+LL RRP+L++++ SAT+D E FS +F A +I + G
Sbjct: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSG 251
Query: 187 FTYPVRTHF---LEDILDMTGYRLTP-YNQIDDYGQE 219
TYPV + +E+ D +L ++ +D+ QE
Sbjct: 252 RTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE 288
Score = 370 (135.3 bits), Expect = 3.3e-66, Sum P(2) = 3.3e-66
Identities = 101/332 (30%), Positives = 175/332 (52%)
Query: 283 KERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESG 342
+E G +L+FM+G +I D L N++ T +L L + +++SEQ +F + SG
Sbjct: 287 QESHGDILIFMSGEREIRDTADAL--NKLNLRHTEILPL--YARLSNSEQNRVF-QSHSG 341
Query: 343 VRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXX 402
R+IVLATN+AETS+T+ + +VID G A+ + Y L IS S
Sbjct: 342 -RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC 400
Query: 403 XXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V G C RLY + + E+ PEILRT L S+ LQ+ +L LG IA F +++P+
Sbjct: 401 GRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAF--PFVEAPD 458
Query: 463 LLAVQNAIEYLKIIGALDHNEE-----LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPV 517
+Q+ + L+ +GA+ +E+ LT LG+ L+ LP++P+L +M++ C+
Sbjct: 459 KRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREA 518
Query: 518 LTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEY- 576
+ I + LS++DP PMDK+ ++ +F SD LA V + + ++ L+ +
Sbjct: 519 MIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFR 578
Query: 577 --CWKNFLSAPSMKVIDSLRKEFLSLLKDTGL 606
C ++L+ ++ + + ++K+ G+
Sbjct: 579 RLCRTDYLNYLRVREWQDIYTQLRQVVKELGI 610
>UNIPROTKB|F1MNA1 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:DAAA02053320 EMBL:DAAA02053321 EMBL:DAAA02053322
EMBL:DAAA02053323 IPI:IPI00699308 Ensembl:ENSBTAT00000027199
Uniprot:F1MNA1
Length = 1392
Score = 392 (143.0 bits), Expect = 4.8e-66, Sum P(3) = 4.8e-66
Identities = 110/303 (36%), Positives = 158/303 (52%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGV 343
ER +VLVF+ G +IN +++ L N + R+ + H S+ EQ +F P G
Sbjct: 390 ER-SSVLVFLPGLGEINYMHELL-TNMV---HKRLQVYPLHSSVTLEEQNNVFLSPVPGY 444
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RKI+L+TNIAE+S+T+ DV +VID + D N L SW S S
Sbjct: 445 RKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCEQRKGRAG 504
Query: 404 XVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V G CYRL + +D + + +PE+LR PL S L++K L +G L+ AL P
Sbjct: 505 RVSKGYCYRLVHKDFWDNSIPNHVIPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPS 564
Query: 463 LLAVQNAIEYLKIIGAL--------D--HNEELTVLGQYLAMLPMEPKLGKMLILGAIFN 512
L ++ I LK +GAL D H+ ELT LG+ LA LP+ +LGK+++LG +F
Sbjct: 565 LSDIERTILLLKEVGALAVSGRREDDNPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVFG 624
Query: 513 CLEPVLTIV---AGLSVRDPFLAPMDKKDLAEAAKSQFS-HDYSDHLALVRAFEGWKDA- 567
CL+ L IV A LS+++ F P + K F+ SD +ALV AF W+
Sbjct: 625 CLDECLIIVLIAASLSLKNFFAMPFRQHLDGYRNKVNFAGSSRSDCIALVEAFRAWQTCR 684
Query: 568 ERG 570
+RG
Sbjct: 685 QRG 687
Score = 381 (139.2 bits), Expect = 4.8e-66, Sum P(3) = 4.8e-66
Identities = 82/212 (38%), Positives = 131/212 (61%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP + K +++ I N VVII G TG GK+TQ+PQ++L+ + R A C+I+ TQPR+
Sbjct: 138 LPISRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYLQ--RSAYCNIVVTQPRK 195
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVT 127
I A S++ ++ ERG LG VGY+V LE + DT+L++ TTG+LL++++ ++L T
Sbjct: 196 IGASSIARWISRERGWVLGGLVGYQVGLEKIATEDTKLIYMTTGVLLQKIVSAKSLVEFT 255
Query: 128 HVIVDEVHERGMNEDFLLIVLKDLLSRRPE-LRLVLMSATLDAELFSSYFG--------G 178
HV +DEVHER DFLL+V++ LL +++VLMSAT++ F+ YF
Sbjct: 256 HVFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATINCREFADYFAVPVQNKMSP 315
Query: 179 ATVINIPGFTYPVRTHFLEDILDMTGYRLTPY 210
A + + G + + ++L D+ + RL+P+
Sbjct: 316 AYIFEVEGKPFSIEEYYLNDLEHVHHSRLSPH 347
Score = 43 (20.2 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 311 ILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAET 355
+L P L CH S+ R ++ E ES + ++++ + +T
Sbjct: 1158 VLHGPFNPYELKCHSLTRISKFRCVWIEKES-INSVIISDSPEDT 1201
Score = 41 (19.5 bits), Expect = 4.8e-66, Sum P(3) = 4.8e-66
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 676 VFNEKMKVNSVFLKDSTAVSDSVLLLFGGSIS 707
V+ EK +NSV + DS + LL+ S+S
Sbjct: 1182 VWIEKESINSVIISDSPEDTHQRLLV-AASLS 1212
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 404 (147.3 bits), Expect = 6.0e-66, Sum P(2) = 6.0e-66
Identities = 88/194 (45%), Positives = 120/194 (61%)
Query: 2 LEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSII 61
+ + NLP + + AIS NQVVII+GETG GKTTQ+P+ LE + S RG +
Sbjct: 70 INYPDNLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGS-RGFIGH-- 126
Query: 62 CTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDR 121
TQPRR++A SV+ RVA E LGE VG+KVR ++ + T GILL L DR
Sbjct: 127 -TQPRRLAARSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDR 185
Query: 122 NLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATV 181
L +I+DE HER +N DF+L LK +L +RP+L++++ SAT+D E FS +F A +
Sbjct: 186 YLDQYDTIIIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPI 245
Query: 182 INIPGFTYPVRTHF 195
I + G TYPV T +
Sbjct: 246 IEVSGRTYPVETRY 259
Score = 358 (131.1 bits), Expect = 6.0e-66, Sum P(2) = 6.0e-66
Identities = 123/448 (27%), Positives = 213/448 (47%)
Query: 287 GAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKI 346
G +L+FM G +I ++L NR T +L L + ++ EQ +F +G R+I
Sbjct: 289 GDILIFMNGEREIRDTAEQL--NRRNYRDTEILPL--YARLSYGEQSKVFSS-HTG-RRI 342
Query: 347 VLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQ 406
VLATN+AETS+T+ + +VID G A+ + Y L IS S V
Sbjct: 343 VLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVG 402
Query: 407 PGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAV 466
PG C RLY ++ + PEILRT L S+ LQ+ ++ LG IA F ++ P+ +
Sbjct: 403 PGICIRLYDEADFNNRPAFTDPEILRTNLASVILQMLAIGLGDIAAF--PFIEPPDPRHI 460
Query: 467 QNA---IEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
++ +E L+ + N LT LG+ L+ +P++P+L +M+I CL VL I +G
Sbjct: 461 RDGFLLLEELQAVKQQKGNIVLTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASG 520
Query: 524 LSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEY---CWKN 580
LS++DP PMDKK ++ A +F+ SD ++ V ++ K+ ++ L+ ++ C
Sbjct: 521 LSIQDPRERPMDKKQASDEAHRRFADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDE 580
Query: 581 FLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIV 640
+L+ ++ L + + D DT + RA++ GL +S I
Sbjct: 581 YLAYLRVREWQDLYTQLKQAVHDLKWRLNDTP-----ANYDALHRALLS-GL---LSHIG 631
Query: 641 QNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
++ + + F++ S A++ P W++ E M+ + +F + + L
Sbjct: 632 FKDNNNEYLGARNRKFFVFPGSPLAKKG--P-KWIMAAELMETSKLFARCCAKIEPEWLE 688
Query: 701 -LFGGSISQGEIDGHLKMMGGYLEFFMN 727
L I + ++ H + G + F N
Sbjct: 689 PLAAHLIKKNHLEPHFEAKQGSVIAFEN 716
Score = 44 (20.5 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 23/107 (21%), Positives = 45/107 (42%)
Query: 471 EYLKIIGALDHNEELTV--LGQYLAM-LPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVR 527
+ L++ G + E+ V + +L M +E GK++ G + + L+ L V ++R
Sbjct: 941 QLLRMSGTRVNPEDFDVSQMPVHLQMNFKIEDDKGKLVAQGRVLDSLKAELQGVVAKAIR 1000
Query: 528 DPFLAPMDKKDLAEAAKSQFSHDYSDHLA--LVRAFEGWKDAERGLA 572
++K+ L E + + VRAF D + +A
Sbjct: 1001 QVANKGIEKEALTEWSFGDLPKQFEQRKGNYQVRAFPALIDNKDSVA 1047
Score = 38 (18.4 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 7/30 (23%), Positives = 19/30 (63%)
Query: 218 QEKMWKMSKQAPRKRKSQIASAVEDTLKAA 247
+ +++K+ K+A +K+Q + + + +AA
Sbjct: 27 RRRLFKLHKEADSDKKTQELAKLAEQAQAA 56
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 404 (147.3 bits), Expect = 6.0e-66, Sum P(2) = 6.0e-66
Identities = 88/194 (45%), Positives = 120/194 (61%)
Query: 2 LEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSII 61
+ + NLP + + AIS NQVVII+GETG GKTTQ+P+ LE + S RG +
Sbjct: 70 INYPDNLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGS-RGFIGH-- 126
Query: 62 CTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDR 121
TQPRR++A SV+ RVA E LGE VG+KVR ++ + T GILL L DR
Sbjct: 127 -TQPRRLAARSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDR 185
Query: 122 NLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATV 181
L +I+DE HER +N DF+L LK +L +RP+L++++ SAT+D E FS +F A +
Sbjct: 186 YLDQYDTIIIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPI 245
Query: 182 INIPGFTYPVRTHF 195
I + G TYPV T +
Sbjct: 246 IEVSGRTYPVETRY 259
Score = 358 (131.1 bits), Expect = 6.0e-66, Sum P(2) = 6.0e-66
Identities = 123/448 (27%), Positives = 213/448 (47%)
Query: 287 GAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKI 346
G +L+FM G +I ++L NR T +L L + ++ EQ +F +G R+I
Sbjct: 289 GDILIFMNGEREIRDTAEQL--NRRNYRDTEILPL--YARLSYGEQSKVFSS-HTG-RRI 342
Query: 347 VLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQ 406
VLATN+AETS+T+ + +VID G A+ + Y L IS S V
Sbjct: 343 VLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVG 402
Query: 407 PGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAV 466
PG C RLY ++ + PEILRT L S+ LQ+ ++ LG IA F ++ P+ +
Sbjct: 403 PGICIRLYDEADFNNRPAFTDPEILRTNLASVILQMLAIGLGDIAAF--PFIEPPDPRHI 460
Query: 467 QNA---IEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
++ +E L+ + N LT LG+ L+ +P++P+L +M+I CL VL I +G
Sbjct: 461 RDGFLLLEELQAVKQQKGNIVLTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASG 520
Query: 524 LSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEY---CWKN 580
LS++DP PMDKK ++ A +F+ SD ++ V ++ K+ ++ L+ ++ C
Sbjct: 521 LSIQDPRERPMDKKQASDEAHRRFADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDE 580
Query: 581 FLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIV 640
+L+ ++ L + + D DT + RA++ GL +S I
Sbjct: 581 YLAYLRVREWQDLYTQLKQAVHDLKWRLNDTP-----ANYDALHRALLS-GL---LSHIG 631
Query: 641 QNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
++ + + F++ S A++ P W++ E M+ + +F + + L
Sbjct: 632 FKDNNNEYLGARNRKFFVFPGSPLAKKG--P-KWIMAAELMETSKLFARCCAKIEPEWLE 688
Query: 701 -LFGGSISQGEIDGHLKMMGGYLEFFMN 727
L I + ++ H + G + F N
Sbjct: 689 PLAAHLIKKNHLEPHFEAKQGSVIAFEN 716
Score = 44 (20.5 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 23/107 (21%), Positives = 45/107 (42%)
Query: 471 EYLKIIGALDHNEELTV--LGQYLAM-LPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVR 527
+ L++ G + E+ V + +L M +E GK++ G + + L+ L V ++R
Sbjct: 941 QLLRMSGTRVNPEDFDVSQMPVHLQMNFKIEDDKGKLVAQGRVLDSLKAELQGVVAKAIR 1000
Query: 528 DPFLAPMDKKDLAEAAKSQFSHDYSDHLA--LVRAFEGWKDAERGLA 572
++K+ L E + + VRAF D + +A
Sbjct: 1001 QVANKGIEKEALTEWSFGDLPKQFEQRKGNYQVRAFPALIDNKDSVA 1047
Score = 38 (18.4 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 7/30 (23%), Positives = 19/30 (63%)
Query: 218 QEKMWKMSKQAPRKRKSQIASAVEDTLKAA 247
+ +++K+ K+A +K+Q + + + +AA
Sbjct: 27 RRRLFKLHKEADSDKKTQELAKLAEQAQAA 56
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 397 (144.8 bits), Expect = 7.0e-66, Sum P(2) = 7.0e-66
Identities = 108/406 (26%), Positives = 200/406 (49%)
Query: 283 KERPGA--VLVFMTGWDDINSLNDKLQ--ANRILGDPTRVLLLTCHGSMASSEQRLIFDE 338
+E P + +LVF+TG ++I +++ + A + +L+L + S+ ++Q +F
Sbjct: 192 QEAPSSQDILVFLTGQEEIEAVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQG 251
Query: 339 PESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXX 398
G RK+++ATNIAETSITI + +V+D G K Y+ + L +S
Sbjct: 252 APKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 311
Query: 399 XXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRAL 458
G CYRLY ++ F + +PEI R L S+ LQ+ ++++ + F +
Sbjct: 312 AGRAGREDSGICYRLYTENEFEKFEKMTVPEIQRCNLASVLLQLLAMKVPNVLTFDFMSK 371
Query: 459 QSPELLAVQNAIEYLKIIGALDHNEE---LTVLGQYLAMLPMEPKLGKMLILGAIFNCLE 515
SP+ + Q A+ L ++GAL+ + LT +G+ +A P+EPK K ++L F+C E
Sbjct: 372 PSPDHM--QAAVAQLDLLGALERKDNQLTLTPIGRKMAAFPLEPKFAKTILLSPKFHCTE 429
Query: 516 PVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAG-Y 574
+LTIV+ LSV P ++D +A + +F DH+ L+ + +K L G
Sbjct: 430 EILTIVSLLSVDSVLYNPPSRRDEVQAMRKKFLSSEGDHITLLNIYRTFKS----LGGDK 485
Query: 575 EYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYP 634
++C +NF+++ +M + +R + L+D L + + G D IR + + L+
Sbjct: 486 DWCRENFVNSRNMMLAAEVRAQ----LRDICL-KMSMPMVSCRG-DVESIRRCLAHSLFM 539
Query: 635 GISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEK 680
+ + +G ++ + + + S + R + + Y L+ K
Sbjct: 540 SAAELQPDGTYTTTDSRQPVAIHPSSALFHCRPACVVYTELLHTSK 585
Score = 346 (126.9 bits), Expect = 7.0e-66, Sum P(2) = 7.0e-66
Identities = 74/172 (43%), Positives = 113/172 (65%)
Query: 29 ISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRRISAMSVSERVASERGEKLGES 88
+SGETG GKTTQ+PQ++ E I R V ++ TQPRR++A+S++ RV+ E+ +LG+
Sbjct: 4 LSGETGSGKTTQLPQYLYEGGIG--RQGVIAV--TQPRRVAAISLATRVSDEKRTELGKL 59
Query: 89 VGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVL 148
VGY VR + + DTR+ F T G+LLR + D L+ + +I+DE HER ++ D L V+
Sbjct: 60 VGYTVRFDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVV 119
Query: 149 KDLLSRRPELR-----LVLMSATLDAELFSSYFGGATVINIPGFTYPVRTHF 195
K RR ELR +++MSAT+D +LFS YF GA+V+ + G +P++ +
Sbjct: 120 KAAQRRRKELRKLPLKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFY 171
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 388 (141.6 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 84/194 (43%), Positives = 119/194 (61%)
Query: 2 LEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSII 61
+E+ LP ++++ + AI+ +QVVI++GETG GKTTQ+P+ E RG I
Sbjct: 81 IEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELG----RGKYGLIG 136
Query: 62 CTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDR 121
TQPRR++A SV+ R+A E +LG VGYKVR T++ T GILL + DR
Sbjct: 137 HTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDR 196
Query: 122 NLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATV 181
L +I+DE HER +N DF+L LK LL RRP+L++++ SAT+D E FS +F A +
Sbjct: 197 FLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPI 256
Query: 182 INIPGFTYPVRTHF 195
I + G TYPV +
Sbjct: 257 IEVSGRTYPVEVRY 270
Score = 372 (136.0 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 100/302 (33%), Positives = 163/302 (53%)
Query: 280 ICEKERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEP 339
+C+ E G +L+FM G +I D L + R L D T ++ L + +++ EQ IF +P
Sbjct: 296 LCD-EGLGDILIFMNGEREIRDTADAL-SKRNLRD-TEIVPL--YARLSAGEQNKIF-QP 349
Query: 340 ESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXX 399
+G R+IVLATN+AETS+T+ + +VID G A+ + Y L IS S
Sbjct: 350 HAG-RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRK 408
Query: 400 XXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQ 459
+ G C RLY + + E+ PEILRT L S+ LQ+ +L LG I F ++
Sbjct: 409 GRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAF--PFVE 466
Query: 460 SPELLAVQNAIEYLKIIGAL-----DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCL 514
+P+ +Q+ + L+ +GA+ D + LT G+ LA LP++P+L +M++ + CL
Sbjct: 467 APDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCL 526
Query: 515 EPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGY 574
+ V+ I + LS++DP P DK+ A+ +F+H+ SD L LV + ++ L
Sbjct: 527 KEVMIIASALSIQDPRERPSDKQQSADDKHRRFNHEDSDFLTLVNLWHYIGQQQKALTSN 586
Query: 575 EY 576
++
Sbjct: 587 QF 588
Score = 44 (20.5 bits), Expect = 3.7e-31, Sum P(2) = 3.7e-31
Identities = 27/110 (24%), Positives = 42/110 (38%)
Query: 498 EPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLAL 557
+P G+ ++L N E LT+ V DP A + + + S A
Sbjct: 348 QPHAGRRIVLAT--NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 405
Query: 558 VRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLS-LLKDTGL 606
R + E G+ Y ++FLS P + LR S +L+ T L
Sbjct: 406 QRKGRCGR-TEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTAL 454
Score = 43 (20.2 bits), Expect = 4.7e-31, Sum P(2) = 4.7e-31
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 224 MSKQAPRKRKSQIASAVEDTLKAANFNEYSSQTRESLSCWN 264
+S Q PR+R S + +D K FN S ++ W+
Sbjct: 536 LSIQDPRERPSDKQQSADD--KHRRFNHEDSDFLTLVNLWH 574
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 388 (141.6 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 84/194 (43%), Positives = 119/194 (61%)
Query: 2 LEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSII 61
+E+ LP ++++ + AI+ +QVVI++GETG GKTTQ+P+ E RG I
Sbjct: 81 IEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELG----RGKYGLIG 136
Query: 62 CTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDR 121
TQPRR++A SV+ R+A E +LG VGYKVR T++ T GILL + DR
Sbjct: 137 HTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDR 196
Query: 122 NLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATV 181
L +I+DE HER +N DF+L LK LL RRP+L++++ SAT+D E FS +F A +
Sbjct: 197 FLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPI 256
Query: 182 INIPGFTYPVRTHF 195
I + G TYPV +
Sbjct: 257 IEVSGRTYPVEVRY 270
Score = 372 (136.0 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 100/302 (33%), Positives = 163/302 (53%)
Query: 280 ICEKERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEP 339
+C+ E G +L+FM G +I D L + R L D T ++ L + +++ EQ IF +P
Sbjct: 296 LCD-EGLGDILIFMNGEREIRDTADAL-SKRNLRD-TEIVPL--YARLSAGEQNKIF-QP 349
Query: 340 ESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXX 399
+G R+IVLATN+AETS+T+ + +VID G A+ + Y L IS S
Sbjct: 350 HAG-RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRK 408
Query: 400 XXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQ 459
+ G C RLY + + E+ PEILRT L S+ LQ+ +L LG I F ++
Sbjct: 409 GRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAF--PFVE 466
Query: 460 SPELLAVQNAIEYLKIIGAL-----DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCL 514
+P+ +Q+ + L+ +GA+ D + LT G+ LA LP++P+L +M++ + CL
Sbjct: 467 APDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCL 526
Query: 515 EPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGY 574
+ V+ I + LS++DP P DK+ A+ +F+H+ SD L LV + ++ L
Sbjct: 527 KEVMIIASALSIQDPRERPSDKQQSADDKHRRFNHEDSDFLTLVNLWHYIGQQQKALTSN 586
Query: 575 EY 576
++
Sbjct: 587 QF 588
Score = 44 (20.5 bits), Expect = 3.7e-31, Sum P(2) = 3.7e-31
Identities = 27/110 (24%), Positives = 42/110 (38%)
Query: 498 EPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLAL 557
+P G+ ++L N E LT+ V DP A + + + S A
Sbjct: 348 QPHAGRRIVLAT--NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 405
Query: 558 VRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLS-LLKDTGL 606
R + E G+ Y ++FLS P + LR S +L+ T L
Sbjct: 406 QRKGRCGR-TEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTAL 454
Score = 43 (20.2 bits), Expect = 4.7e-31, Sum P(2) = 4.7e-31
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 224 MSKQAPRKRKSQIASAVEDTLKAANFNEYSSQTRESLSCWN 264
+S Q PR+R S + +D K FN S ++ W+
Sbjct: 536 LSIQDPRERPSDKQQSADD--KHRRFNHEDSDFLTLVNLWH 574
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 399 (145.5 bits), Expect = 2.7e-65, Sum P(2) = 2.7e-65
Identities = 111/412 (26%), Positives = 202/412 (49%)
Query: 289 VLVFMTGWDDINSLNDKL-QANRI-LGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKI 346
VL+F+TG ++I SL ++ Q +I T + + T + ++ +Q F + VRK+
Sbjct: 284 VLIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKV 343
Query: 347 VLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQ 406
+LATNIAETSITI + VIDCG KE S++ ++ L IS
Sbjct: 344 ILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDA 403
Query: 407 PGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLG-TIAGFLSRALQSPELLA 465
G CYR Y + D+FA+ PEILRT S+ LQ+ +L + FL L+
Sbjct: 404 DGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQLLALDIDCNNFDFLDPPLED----G 459
Query: 466 VQNAIEYLKIIGALDHNEE--LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
+++A + L +GA+ ++ +T LG+ + P++PK K+L+ + F C+E +L++V+
Sbjct: 460 LRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSV 519
Query: 524 LSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLS 583
LS F++ +K ++A A ++F + DHL L+ F G+ +E+ +C N+L+
Sbjct: 520 LSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKM---WCHDNYLN 576
Query: 584 APSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNG 643
S+ ++R++ + + L N+ D ++ I G + I+ + ++G
Sbjct: 577 LRSLTYARNVRRQLREISEHLHLA------LNS-SDDIEMLKKCILNGFFENIAVLQRDG 629
Query: 644 KSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVS 695
G + + + + +++F E ++ FL+ T +S
Sbjct: 630 ----FYITASGNIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEIS 677
Score = 344 (126.2 bits), Expect = 2.7e-65, Sum P(2) = 2.7e-65
Identities = 78/200 (39%), Positives = 121/200 (60%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
+++LP + ++R+L + N V+I ETG GKTTQ+PQF+L + + + I TQ
Sbjct: 65 QKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYA--KNGMIGI--TQ 120
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++A++V+ RVA E +G++VGY VR E + R T++ F T G+LLR + DR L
Sbjct: 121 PRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLL 180
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE-----LRLVLMSATLDAELFSSYFGGA 179
+ +I+DE HER +N D L ++KD R + L++V+ SAT+D + F +YF
Sbjct: 181 KYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFN-C 239
Query: 180 TVINIPGFTYPVRT-HFLED 198
+ + G TYPVR H E+
Sbjct: 240 KGMYLEGRTYPVRVMHTKEE 259
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 426 (155.0 bits), Expect = 6.6e-64, Sum P(2) = 6.6e-64
Identities = 90/207 (43%), Positives = 137/207 (66%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP Y K++++ I+ NQV I+ GETG GK+TQ+PQF++ E + G
Sbjct: 175 LLQIREKLPIYHHKDKIIEYINNNQVTIVIGETGSGKSTQIPQFLMP-ENPKMIGV---- 229
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
TQPRR++A S++ RV+ E G KLG+ VGY+VR M R T+L + T G+LLR +++D
Sbjct: 230 --TQPRRVAAASLAARVSEEYGCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLLREIMLD 287
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLS--RRPELRLVLMSATLDAELFSSYFGG 178
NL + +I+DE HER + D ++ LK +++ +R +L++V+MSATL+AELFS++FG
Sbjct: 288 SNLTKYSTIILDEAHERTILTDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFSNFFGN 347
Query: 179 ATVINIPGFTYPVRTHFL----EDILD 201
A ++ I G YPV +L EDI+D
Sbjct: 348 APILYIEGKMYPVSQFYLDAESEDIVD 374
Score = 307 (113.1 bits), Expect = 6.6e-64, Sum P(2) = 6.6e-64
Identities = 97/340 (28%), Positives = 169/340 (49%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKLQ--ANRILGDPTRVLLLTCHGSMASSEQRLIFDEPES 341
E G VL F+ G ++I++ L+ A ++ + ++ L + +++ +Q IF++
Sbjct: 387 EPEGDVLCFLPGQEEIDNCVKSLEQLAPQLPREAPLIVPLPLYAALSPGQQSKIFEKLPK 446
Query: 342 GVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXX 401
G RK++LATNIAETSIT++ V +VID G K + S LL + IS S
Sbjct: 447 GRRKVILATNIAETSITVSGVKYVIDSGLRKIKVWKHNLGLSTLLTTPISQASARQRAGR 506
Query: 402 XXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSP 461
G+ +RLYP Y A + Q EI R + L +K L + + + L+ P
Sbjct: 507 AGRESEGKVFRLYPESTYMALPKQQESEIKRNDIILPVLTLKKLGVDDLLNW--SWLEYP 564
Query: 462 ELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIV 521
A+ +A+ L +GAL+ + ++T LG +++LP+ P+L +LI A F L PV+ I
Sbjct: 565 GQDAILSALNTLYTLGALNDSGKVTTLGYKMSILPLPPQLSVVLITAAEFGVLSPVIDIA 624
Query: 522 AGLSVRDPFLAPM--DKKDLAEAAKSQ---FSHDYSDHLALVRAFEGWKDAERGLAGYEY 576
+ LSV D + + + +D + Q + + D +AL F+ ++ A+ G E+
Sbjct: 625 SCLSV-DNLITNVTGEARDEINFKRRQHCPLGNIHGDLIALYEYFQAYQ-AQ----GKEW 678
Query: 577 CWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNA 616
C + S K ++ ++ + + T + D S+ NA
Sbjct: 679 CKELAFSFKGFKNVEKIKYQLQEYMMTT--IKQDDSLTNA 716
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 377 (137.8 bits), Expect = 5.2e-63, Sum P(3) = 5.2e-63
Identities = 122/435 (28%), Positives = 208/435 (47%)
Query: 286 PGAVLVFMTGWDDIN----SLNDKLQANRILGD--------P-TRVLLLTCHGSMASSEQ 332
PG +LVF+TG ++I +L+DK + R P + LL + ++ ++Q
Sbjct: 286 PGDILVFLTGQEEIEKLIQTLDDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQ 345
Query: 333 RLIFDE--PESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWI 390
+F+ +RKI+++TNIAETSITI+ VV+V+DCG K SYD+ + L+
Sbjct: 346 IKVFESVGDSKKIRKIIISTNIAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPT 405
Query: 391 STVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQ-LPEILRTPLQSLCLQIKSLRLGT 449
S S + G+CYRLY Y+ Q +PEI R+ L + LQ+K+L +
Sbjct: 406 SKSSANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGIDN 465
Query: 450 IAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELT-VLGQYLAMLPMEPKLGKMLILG 508
I F + P ++ +E L +GALD N +LT G +A P +P KM+I
Sbjct: 466 ILNF--DFISQPPSSSLIRGLEVLYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQS 523
Query: 509 AI--FNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKD 566
+ FNC + +TI A L+++ F K K DHL L+ F +
Sbjct: 524 SSNGFNCSDECITITAMLNIQGLFTNQNHKSRKHLLVKE------GDHLTLLNIFNSFIS 577
Query: 567 AERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLK--DTGLVDCDTSICNAWGRDERFI 624
+ + ++C ++ ++ +M+ + +RK+ L+ K ++ C S N + I
Sbjct: 578 NQ---SSPQWCNQHQINYKAMQRVLQVRKQLLAYAKKYSINVISCFDSNNNR-EQCSNLI 633
Query: 625 RAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVN 684
R I G + + + +G +++ E +++L+ SV S P W++FNE
Sbjct: 634 RKAIVSGFFTNAAQLQPDGSYQTIR--EKHKLWLHPTSVLCL-SNSPQ-WVIFNEVTITT 689
Query: 685 SVFLKDSTAVSDSVL 699
++KD T++ + L
Sbjct: 690 KEYMKDVTSIEPNWL 704
Score = 314 (115.6 bits), Expect = 5.2e-63, Sum P(3) = 5.2e-63
Identities = 68/184 (36%), Positives = 116/184 (63%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R +LP Y+ + +L + + ++I G TGCGK+TQ+PQ++ ES + +I+CTQ
Sbjct: 52 RISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSD---GFRTILCTQ 108
Query: 65 PRRISAMSVSERVASERGEK-LGESVGYKVRL-EGMKGRDTRLLFCTTGILLRRLLVDRN 122
PRR++A+S++ERVA E GE+ +G++VGY VR E + +TR+ + T G+L+R +++D
Sbjct: 109 PRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIREMMLDPL 168
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE----------LRLVLMSATLDAELF 172
L + +++DE HER + D L+ +LK + +R L+L++ SATL+A F
Sbjct: 169 LLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSATLNANDF 228
Query: 173 SSYF 176
++F
Sbjct: 229 FNFF 232
Score = 77 (32.2 bits), Expect = 5.2e-63, Sum P(3) = 5.2e-63
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 158 LRLVLMSATLDAELFSSYFG----------GATVINIPGFTYPVRTHFLED 198
L+L++ SATL+A F ++F +T+++I G TYPV H+LE+
Sbjct: 214 LKLIISSATLNANDFFNFFNYNQTNDKSKDTSTILSIEGRTYPVDIHYLEE 264
>UNIPROTKB|F1S4S9 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR006575
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00642
Pfam:PF05773 PROSITE:PS50103 SMART:SM00356 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR026290 PANTHER:PTHR11224 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU694750
Ensembl:ENSSSCT00000009281 OMA:HRYPYQA Uniprot:F1S4S9
Length = 745
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 131/261 (50%), Positives = 187/261 (71%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R++LPA++E+ +L +S++QV+++SG TGCGKTTQ+PQFIL+ + V +I
Sbjct: 463 ILQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEKVANI 522
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
+CTQPRRISA+SV+ERVA ER E++G +VGY++RLE +K TRLL+CTTG+LLRRL D
Sbjct: 523 VCTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 582
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+GVTH+IVDEVHER DFLL+VLKD+L +RP L+++LMSATL+AELFS YF
Sbjct: 583 TALQGVTHIIVDEVHERTEESDFLLLVLKDILLQRPTLQVILMSATLNAELFSEYFNSCP 642
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA-SA 239
VI IPG T+PV +FLED + +T Y L + Y + +MSK+ R R+++ A
Sbjct: 643 VITIPGRTFPVDQYFLEDAIAVTRYVLQDGSP---YARSTK-QMSKEKLRARRNRTAFEE 698
Query: 240 VEDTLKAANFNEYSSQTRESL 260
VE+ L+ + + +++L
Sbjct: 699 VEEDLRLSLHLQDQDSVKDAL 719
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 390 (142.3 bits), Expect = 2.5e-62, Sum P(2) = 2.5e-62
Identities = 86/195 (44%), Positives = 121/195 (62%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
++ LP K +N+LL A+ QNQ+ I+ G TGCGKTTQ+PQF+ E+ S G + CTQ
Sbjct: 22 KKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIG---CTQ 78
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR+ A SVSERV+ E G GY ++ + T++ + T GILL + D L+
Sbjct: 79 PRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLE 138
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATV--I 182
+ VI+DEVHER ++ D LL VLK +L +R + RLVL SA++DA S +FG V +
Sbjct: 139 RYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTM 198
Query: 183 NIPGFTYPVRTHFLE 197
+I G +PV T FL+
Sbjct: 199 SIEGKLFPVETLFLQ 213
Score = 323 (118.8 bits), Expect = 2.5e-62, Sum P(2) = 2.5e-62
Identities = 107/417 (25%), Positives = 197/417 (47%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQANRI-LGDPTRVLL-LTCHGSMASSEQRLIFDEPESGV 343
PG +LVF++G +I K++ + I + + L+ L H + EQ +F+ +
Sbjct: 236 PGDILVFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDF 295
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK++ +TNIAETSITI+ +V+V+D G K+ Y+ TS L+ IS S
Sbjct: 296 RKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAG 355
Query: 404 XVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
G+ +RLY Y E +IL + L L +K L L I F P
Sbjct: 356 RTMRGKVFRLYTEKAYSLMKEEFEADILNCDMSPLVLFLKGLGLKNILQF--PFFVRPPT 413
Query: 464 LAVQNAIEYLKIIGALDHNEELT-VLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ + A+E L ++G LD + LT LG ++ ++ + K L+ F C +L+I +
Sbjct: 414 VHLMAALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIAS 473
Query: 523 GLSVRDPFLAPMDK-KDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNF 581
L+ + F P K+ A A S F + D + + FE + ++ L ++C KN+
Sbjct: 474 ILTAGEVFYNPTSSSKNDAFVAHSSFFANEGDIITALNVFESFVGNKKDL---QWCRKNY 530
Query: 582 LSAPSMKVIDSLRKEFLSLLKDTGLVDCD---TSICNAWGRDERFIRAVICYGLYPGISS 638
L+ +++ +R + L + +S C+ + ++ ++ G ++
Sbjct: 531 LNYQTLRQALDIRTHLVRFLNKFSIPTAQRLPSSDCS------KILKCLLD-GFVRNVAH 583
Query: 639 IVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNS-VFLKDSTAV 694
+ +G S KT+ QV+L S+SV E + P W++++ ++ + +F+K+ + +
Sbjct: 584 LQNDG---SYKTIGGKQVWLDSSSV-LHEKKTP--WIMYSSAVESETQIFVKNISKI 634
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 374 (136.7 bits), Expect = 2.1e-61, Sum P(2) = 2.1e-61
Identities = 84/199 (42%), Positives = 117/199 (58%)
Query: 2 LEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSII 61
+ + LP + ++ AI NQVVII+GETG GKTTQ+P+ LE RG I
Sbjct: 93 ITYPEGLPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKICLELG----RGVDGLIG 148
Query: 62 CTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDR 121
TQPRRI+A +V+ R+A E G KLGE VGYKVR + + T GILL + DR
Sbjct: 149 HTQPRRIAARTVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYIKLMTDGILLAEMQRDR 208
Query: 122 NLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG--- 178
L +I+DE HER +N DF+L LK +L +RP+L+L++ SAT+D + F+ +F
Sbjct: 209 LLLKYDTIIIDEAHERSLNIDFILGYLKQILIKRPDLKLIITSATIDPQRFAKHFSSKNG 268
Query: 179 --ATVINIPGFTYPVRTHF 195
A +I + G T+PV +
Sbjct: 269 LPAPIIEVSGRTFPVEMRY 287
Score = 347 (127.2 bits), Expect = 2.1e-61, Sum P(2) = 2.1e-61
Identities = 105/336 (31%), Positives = 170/336 (50%)
Query: 287 GAVLVFMTGWDDINSLNDKL-QANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRK 345
G +LVF+ G +I L +AN T VL L + + SEQ IF +P SG R
Sbjct: 325 GDILVFLNGEREIRDTAAALVKANL---RHTNVLPL--YARLTVSEQNQIF-KPHSG-RN 377
Query: 346 IVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXV 405
IVLATN+AETS+T+ + +VID G A+ + Y L +S S V
Sbjct: 378 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRCGRV 437
Query: 406 QPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLA 465
G C RLY Y + AE+ PEILRT L ++ LQ+ +L LG IA F +++P+
Sbjct: 438 SEGICIRLYSEDDYKSRAEFTDPEILRTNLATVILQMHALDLGDIANF--PFVEAPDNRN 495
Query: 466 VQNAIEYLKIIGALDHNE---------------ELTVLGQYLAMLPMEPKLGKMLILGAI 510
+ + + L+ I A++ E +LT G+ LA P++P+L KM++
Sbjct: 496 ITDGVRLLEEIAAVESIENADKNAKGKASSTATQLTKSGRLLAKFPIDPRLAKMVVSSIE 555
Query: 511 FNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERG 570
F C+E +L IV+ LS++DP P +K+ L++ ++F SD ++L+ ++ + ++
Sbjct: 556 FGCIEQILIIVSALSIQDPRERPHEKQQLSDEKHNRFKDKSSDFISLLNLWQYINEQKKD 615
Query: 571 LAGYEY---CWKNFLSAPSMKVIDSLRKEFLSLLKD 603
L ++ C + FLS ++ + + LK+
Sbjct: 616 LTQNQFRKLCQREFLSYVRLREWQDIFSQLKLTLKE 651
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 387 (141.3 bits), Expect = 5.6e-61, Sum P(3) = 5.6e-61
Identities = 114/396 (28%), Positives = 192/396 (48%)
Query: 157 ELRLVLMSATLDAELFS---SYFGGAT-VINIPGFTYPVRTHF-LEDILDMT--GYRLT- 208
+L+L++MSATL FS + F A V+ + +PV HF + T +R T
Sbjct: 552 KLKLIIMSATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTC 611
Query: 209 ------PYNQIDDY--GQEKMWKM----SKQAPRKRKSQIASAVEDTLKAANFNEYSSQT 256
P I + GQ+++ M K+ P K+ S+ +E + N ++
Sbjct: 612 KIHQKLPPGAILVFLTGQQEITHMVKRLRKEFPFKKNSKYNKDLETPVSKMGINSKTTDL 671
Query: 257 RESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKLQANRILGDPT 316
++ I + + + Y E++ + ++ + L + DP
Sbjct: 672 EAEDIDFSVQVIDQDKFKSAIRY--EEDEGNSGNGEDEEDEEEEGFEEVLTEGQTANDPL 729
Query: 317 RVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSY 376
VL L + + + EQ +F +P G R ++ATN+AETS+TI V +V+D G++KE Y
Sbjct: 730 YVLPL--YSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKY 787
Query: 377 DALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRTPL 435
+ N W+S S PG CYRLY V++ F ++ PEILR P+
Sbjct: 788 NESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPV 847
Query: 436 QSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAML 495
+S+ LQ+KS+ + I F P+ +A+ AI+ L+ +GALD+ E +T G+ +++
Sbjct: 848 ESIVLQMKSMAIHNIINFPFPT--PPDRVALSKAIQLLQYLGALDNKEMITEDGKKMSLF 905
Query: 496 PMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFL 531
P+ P+ KML++ CL ++ IV+ LSV DPF+
Sbjct: 906 PLSPRFSKMLLVSDEKACLPYIVAIVSALSVGDPFI 941
Score = 324 (119.1 bits), Expect = 5.6e-61, Sum P(3) = 5.6e-61
Identities = 81/208 (38%), Positives = 121/208 (58%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCS--IIC 62
R LP + E+++++ AI N VVII GETG GKTTQVPQF+ E+ + +
Sbjct: 388 RIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPGMVGI 447
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRR++A+S++ERVA+E G+ G VGY++R + DT++ F T G+LLR ++ D
Sbjct: 448 TQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMMHDFK 506
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRR-------P----ELRLVLMSATLDAEL 171
L + +I+DE HER +N D L+ +L + R P +L+L++MSATL
Sbjct: 507 LTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSATLRVSD 566
Query: 172 FS---SYFGGAT-VINIPGFTYPVRTHF 195
FS + F A V+ + +PV HF
Sbjct: 567 FSENKTLFPIAPPVLQVDARQFPVSIHF 594
Score = 53 (23.7 bits), Expect = 5.6e-61, Sum P(3) = 5.6e-61
Identities = 24/82 (29%), Positives = 41/82 (50%)
Query: 529 PFLAPMDKKDLAEA---AKSQFSH--DYSDH---LALVRAFEGWKDAERGLAGYEYCWKN 580
P + P KK+L ++SQFS +SD L++V A + ++ + + KN
Sbjct: 973 PGMDPELKKELRSKFYKSRSQFSKLDKFSDVFRLLSVVSAMDYVPKEQKEI----FMKKN 1028
Query: 581 FLSAPSMKVIDSLRKEFLSLLK 602
FL M+ I LRK+ + ++K
Sbjct: 1029 FLRGKLMEEIVKLRKQLMYIIK 1050
Score = 39 (18.8 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 634 PGISSIVQNGKSSSLKTMEDGQV 656
PG+ +V +G+S K E V
Sbjct: 771 PGVRYVVDSGRSKERKYNESNGV 793
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 363 (132.8 bits), Expect = 2.0e-60, Sum P(2) = 2.0e-60
Identities = 98/336 (29%), Positives = 168/336 (50%)
Query: 272 LIEYVLCY----ICEKERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSM 327
L+E ++C I +++ GA+L+F+ G I + +L R ++ LL +G +
Sbjct: 208 LLEKIVCIVERVIASRDK-GAILIFLPGERSIKNCITRLSHERWF---RKLFLLPLYGRL 263
Query: 328 ASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLP 387
+ EQ +F+ G RK+V+ATNIAETSITI+DV VID G K SY+ L+ T+ L
Sbjct: 264 SKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTASLDE 323
Query: 388 SWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRL 447
+ IS S V+ G CYRLY R ++ Y L EI RT L + +++ L +
Sbjct: 324 TPISQASCNQRRGRAGRVRAGTCYRLYSRDDFEQREPYTLEEIYRTDLSEVVMRMAELGI 383
Query: 448 GTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLI- 506
F + P + A + L+++GAL+ + L+ +G+ + + P+ P+ +M++
Sbjct: 384 HDFEHF--DFISPPGTHGIIGAEDTLRLLGALEDDRSLSEIGKMMCLFPLGPRQSRMIVE 441
Query: 507 -LGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWK 565
L + ++ VL A LS R P + D+++ + A FS D ++ +R + +
Sbjct: 442 ALRRYPHSIDDVLIAAAFLSARSPLIFSEDQEEKTKKAHGTFSDPMGDFVSFLRIYRAYA 501
Query: 566 DAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLL 601
+ +C +L M I ++ KE L L+
Sbjct: 502 QENNK---HSFCQHFYLDERIMAEISNI-KEQLELI 533
Score = 336 (123.3 bits), Expect = 2.0e-60, Sum P(2) = 2.0e-60
Identities = 72/190 (37%), Positives = 113/190 (59%)
Query: 6 RNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQP 65
+ LP Y +K+++L+A++ + V+++ TG GKTTQ+P + E+ G + TQP
Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNE--GGAIGV--TQP 60
Query: 66 RRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKG 125
RRI+ +SVSE +A + VGYK+R E +T++ T GILL+ + +D L
Sbjct: 61 RRIAVLSVSEFIAKQVLHVQPGIVGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSK 120
Query: 126 VTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIP 185
+ ++VDE HER +N DF+L +LK +L +R + R+V+ SAT++ +FS YF VI I
Sbjct: 121 YSIIMVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPVIKID 180
Query: 186 GFTYPVRTHF 195
YPV F
Sbjct: 181 AVAYPVTVIF 190
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 442 (160.7 bits), Expect = 3.3e-60, Sum P(2) = 3.3e-60
Identities = 118/441 (26%), Positives = 222/441 (50%)
Query: 265 PDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKL--QANRIL--GDPTRVLL 320
PD I + +E V+ I + E G VL F+TG +++ ++ L QA + G + +
Sbjct: 224 PDYIK-STVETVV-KIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRV 281
Query: 321 LTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALN 380
L + + S EQ +F+ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+
Sbjct: 282 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRT 341
Query: 381 NTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCL 440
CL+ +S S + G+CYRLY +D + +PE+ R+ L + L
Sbjct: 342 AIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVIL 401
Query: 441 QIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTV-LGQYLAMLPMEP 499
Q+K+L + + F + P ++ A+E L +G LD + LT LG +A P+ P
Sbjct: 402 QLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNP 459
Query: 500 KLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVR 559
KML+ F C + +L+I A + +++ F+ P ++K A +F+ + DHL ++
Sbjct: 460 MFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLN 519
Query: 560 AFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGR 619
+E + + ++C ++FL+ + ++R++ LL V ++ G
Sbjct: 520 IYEAFIKHNKDS---KWCQEHFLNYKGLVRAATVREQLKKLL-----VKFQVPRKSSEGD 571
Query: 620 DERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNE 679
+ +R ++ G + + G +++ +D ++ ++ SV E P W+++NE
Sbjct: 572 PDLVLRCIVS-GFFANAARFHSTGAYRTIR--DDHELHIHPASVLYAEK--PPRWVIYNE 626
Query: 680 KMKVNSVFLKDSTAVSDSVLL 700
++ + +++D TA+ + LL
Sbjct: 627 VIQTSKYYMRDVTAIESAWLL 647
Score = 245 (91.3 bits), Expect = 3.3e-60, Sum P(2) = 3.3e-60
Identities = 64/190 (33%), Positives = 105/190 (55%)
Query: 19 TAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRRISAMSVSERVA 78
T + N +S E K V +++ E+ T+ G V + TQPRR++A++V+ RVA
Sbjct: 35 TTVVYNPYAALSIEQQRQKLP-VFKYLAEAGWTA-EGRVVGV--TQPRRVAAVTVAGRVA 90
Query: 79 SERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEVHER 137
ERG LG VGY +R + + TR+ F T G+L+R ++VD L + +++DE HER
Sbjct: 91 EERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHER 150
Query: 138 GMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG----------ATVINIPGF 187
+ D + +LK + +R +LRL++ SATLDA+ F +F ++ + G
Sbjct: 151 TLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGR 210
Query: 188 TYPVRTHFLE 197
T+PV +L+
Sbjct: 211 TFPVDIFYLQ 220
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 379 (138.5 bits), Expect = 1.2e-59, Sum P(4) = 1.2e-59
Identities = 80/238 (33%), Positives = 133/238 (55%)
Query: 297 DDINSLNDKLQANRILGDPTRVL-LLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAET 355
+DI+ + ++ D + + +L + + + +Q +FD G R ++ATN+AET
Sbjct: 680 EDIDQVPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAET 739
Query: 356 SITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYP 415
SITI ++ +V+DCGKAKE Y+ + WIS + PG CYRLY
Sbjct: 740 SITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYS 799
Query: 416 RCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLK 474
V+D+ F + LPEILRTP++S+ LQ+K++ + IA F SP ++ +++ L
Sbjct: 800 SAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPT--SPGRSRLEKSLKLLS 857
Query: 475 IIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLA 532
+GA+D LT LG+ +++ P+ P+ KMLI+G CL V+ +V+ LS+ F++
Sbjct: 858 NLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFVS 915
Score = 307 (113.1 bits), Expect = 1.2e-59, Sum P(4) = 1.2e-59
Identities = 84/208 (40%), Positives = 111/208 (53%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R LP E+ R++ I N VVII G TG GKTTQ+PQF+ E+ +S +I
Sbjct: 393 ESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGMIA 452
Query: 63 -TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDR 121
TQPRR++A+S+++RV SE V Y++R + DT + F T GILLR L D
Sbjct: 453 ITQPRRVAAVSIAKRV-SEELTGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSSDF 511
Query: 122 NLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE----------LRLVLMSATLDAEL 171
L + VIVDE HER +N D LL +L ++ R E L+L++MSATL
Sbjct: 512 LLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRVTD 571
Query: 172 FSS---YFG-GATVINIPGFTYPVRTHF 195
FS F +I I YPV HF
Sbjct: 572 FSENKLLFSVPPPIIKIDARQYPVSIHF 599
Score = 57 (25.1 bits), Expect = 1.2e-59, Sum P(4) = 1.2e-59
Identities = 9/28 (32%), Positives = 20/28 (71%)
Query: 575 EYCWKNFLSAPSMKVIDSLRKEFLSLLK 602
++C +N+L +++ + +LRK+ + LLK
Sbjct: 988 KFCKENYLREKALEEVTNLRKQIIGLLK 1015
Score = 52 (23.4 bits), Expect = 1.2e-59, Sum P(4) = 1.2e-59
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 277 LCYICEKERPGAVLVFMTGWDDINSLNDKLQ 307
+C I ++ G++LVF+TG ++ L L+
Sbjct: 615 VCLIHKRLPAGSILVFLTGQQEVEQLCQMLR 645
Score = 48 (22.0 bits), Expect = 5.9e-24, Sum P(3) = 5.9e-24
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 412 RLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLS 455
R YP ++ F P+ L+ +CL K L G+I FL+
Sbjct: 591 RQYPVSIH--FNRTTKPDYLQDAFDKVCLIHKRLPAGSILVFLT 632
Score = 38 (18.4 bits), Expect = 7.5e-22, Sum P(2) = 7.5e-22
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 273 IEYVLCYICEKERPGAVLVFMTGWDDINSLNDK 305
I+ V Y +KE+ G V +F +G + + + D+
Sbjct: 1050 IDQVALY--DKEKRGYVTLFPSGSEVVQFVPDR 1080
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 350 (128.3 bits), Expect = 2.8e-59, Sum P(4) = 2.8e-59
Identities = 75/218 (34%), Positives = 119/218 (54%)
Query: 315 PTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKET 374
P+R+ +L + + + EQ +F+ P G R +VLATN+AETS+TI + +V D G++KE
Sbjct: 672 PSRMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAETSLTIPGIRYVFDSGRSKER 731
Query: 375 SYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDA-FAEYQLPEILRT 433
YD L WIS S PG C+RLY VY+ E+ LPE+LRT
Sbjct: 732 KYDQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWRLYSSAVYERDLDEFALPELLRT 791
Query: 434 PLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLA 493
L+ + LQ+KS+ L + F PE ++ + + LK I A+ +T +G ++
Sbjct: 792 SLEGVVLQLKSMNLQHVVNFPFPT--PPERDSLVKSEKLLKYISAVSEEGRVTQVGYTMS 849
Query: 494 MLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFL 531
+ P+ P+ ++L+LG +CL +T+VA LS + F+
Sbjct: 850 IFPLSPRFSRILLLGHQHDCLHYTVTLVAALSAAEIFI 887
Score = 344 (126.2 bits), Expect = 2.8e-59, Sum P(4) = 2.8e-59
Identities = 83/206 (40%), Positives = 120/206 (58%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSII-CT 63
R LP E+ R++ AI N +V++ G TG GKTTQ+PQF+ E+ S +I T
Sbjct: 354 RLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGSPDSPTPGMIGIT 413
Query: 64 QPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNL 123
QPRR++A+S+S+RVA E G+ + VGY++R EG +DT + F T G+LLR + D L
Sbjct: 414 QPRRVAAVSMSKRVAEELGDH-SQKVGYQIRFEGTVNKDTAVKFMTDGVLLREVAQDLAL 472
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE----------LRLVLMSATLDAE-LF 172
+ + ++VDE HER +N D L+ +L ++ R E L+LV+MSATL E L
Sbjct: 473 RKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTVKPLKLVIMSATLRIEDLT 532
Query: 173 SSYFGGAT---VINIPGFTYPVRTHF 195
+ AT V+ + G YPV HF
Sbjct: 533 ENKNLFATPPPVLEVEGRQYPVTLHF 558
Score = 59 (25.8 bits), Expect = 2.8e-59, Sum P(4) = 2.8e-59
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 282 EKERPGAVLVFMTGWDDINSLND--KLQANRI 311
+K PG +LVF+TG ++I L+ KLQ N +
Sbjct: 579 KKLPPGGMLVFLTGQNEITQLSKRLKLQFNGV 610
Score = 47 (21.6 bits), Expect = 4.1e-28, Sum P(3) = 4.1e-28
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 553 DHLALVRAFE-GW--------KDAERGLAGYEYCWKNFLSAPSMKVID 591
D L V++FE GW ++ G G +CW+ + SA + +D
Sbjct: 734 DQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWRLYSSAVYERDLD 781
Score = 42 (19.8 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 421 AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSR 456
+FA + L P + Q+K+L+ AGF+ R
Sbjct: 988 SFANINFQDKLDAPTEK---QVKALKQMVAAGFIDR 1020
Score = 41 (19.5 bits), Expect = 2.8e-59, Sum P(4) = 2.8e-59
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 575 EYCWKNFLSAPSMKVIDSLRKEFLSLLK 602
++C +F+ +K LR++ + LLK
Sbjct: 956 KWCESHFVRFKVLKEAQKLRQQIVQLLK 983
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 480 (174.0 bits), Expect = 1.0e-58, Sum P(2) = 1.0e-58
Identities = 137/420 (32%), Positives = 215/420 (51%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLL-LTCHGSMASSEQRLIFDEPESGV 343
PG +LVF+TG ++I + + LQ R LG R LL L + ++ S Q IF G
Sbjct: 127 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 186
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK+V+ATNIAETS+TI +++V+D G K+ SY+ L + S S
Sbjct: 187 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 246
Query: 404 XVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V G+C+RLY Y E +PEI RT L ++ L +KSL + + F L P
Sbjct: 247 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF--DFLDPPP 304
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ A+E L +GAL+H ELT G+ +A LP++P L KM++ ++C E +LT+ A
Sbjct: 305 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 364
Query: 523 GLSVRDP-FLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNF 581
LSV + F P DK A+ A+ F DHL L+ + W AE G + ++C++NF
Sbjct: 365 MLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQW--AESGYSS-QWCYENF 421
Query: 582 LSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ 641
+ SM+ +R++ LL+ V+ S C D +R I G + + + +
Sbjct: 422 VQFRSMRRARDVREQLEGLLER---VEVGLSSCQG---DYIRVRKAITAGYFYHTARLTR 475
Query: 642 NGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
+G +T++ Q VF++ NS + E + P WL+++E + F++ + S LL
Sbjct: 476 SG----YRTVKQQQTVFIHPNS-SLFEQQ-PR-WLLYHELVLTTKEFMRQVLEIESSWLL 528
Score = 156 (60.0 bits), Expect = 1.0e-58, Sum P(2) = 1.0e-58
Identities = 30/63 (47%), Positives = 44/63 (69%)
Query: 129 VIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPGFT 188
V+VDE HER ++ D L ++KD+ RPEL++++ SAT+D FS++F GA V IPG
Sbjct: 36 VMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFRIPGRR 95
Query: 189 YPV 191
+PV
Sbjct: 96 FPV 98
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 362 (132.5 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 76/194 (39%), Positives = 122/194 (62%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP + + L+ A+S+ +I++GETG GK+TQ+P+++ E+ + GA+ TQPRR
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQ-HGAIG---VTQPRR 56
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVT 127
++ +SV++RVA E G LG VGY+VR + +T + + T G LLR +L D L +
Sbjct: 57 VATISVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYS 116
Query: 128 HVIVDEVHERGMNEDFLLIVLKDLL------SRRPELRLVLMSATLDAELFSSYFGGATV 181
+I+DE HER ++ D L +LK L R+ E+++V+MSATL+ + S +FG +V
Sbjct: 117 IIILDEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSV 176
Query: 182 INIPGFTYPVRTHF 195
++IPG +YPV+ F
Sbjct: 177 LHIPGRSYPVKEIF 190
Score = 321 (118.1 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 113/424 (26%), Positives = 191/424 (45%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKL--QANRI-----LGDPT--RVLLLTCHGSMASSEQRL 334
E G +LVF+TG +I D L +A I + D + +L+L +GSM++ +Q+
Sbjct: 219 EPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYGSMSTDQQKR 278
Query: 335 IFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVS 394
IF G+RK V++TNIA TS+TI V +V+D G K+ +++ L IS
Sbjct: 279 IFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDILEVVPISKSE 338
Query: 395 XXXXXXXXXXVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGF 453
G+ YRLY ++ ++ +PEI RT L S+ L +K L + + F
Sbjct: 339 AMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLKCLSVHDVIRF 398
Query: 454 LSRALQSPELLAVQNAIEYLKIIGALDHNEE--LTVLGQYLAMLPMEPKLGKMLILGAIF 511
L PE + A++ L A+D +T LG++L P+ P L +I A
Sbjct: 399 --PYLDRPEERHILEALKQLYQCDAIDRTRRGHVTRLGEFLVQFPLPPNLSCAVIKAASL 456
Query: 512 NCLEPVLTIVAGLSVRDPFLAPMD--KKDLAEAAKSQFSHDY---SDHLALVRAFEGWKD 566
+C + +L I A LSV + F+ P D K+ AE + S +D L+ FE K
Sbjct: 457 DCEDMLLPIAAMLSVENVFIRPGDPQKQKEAELQHQELSSQVGGCNDFATLLNIFEQCKA 516
Query: 567 AERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRA 626
++ A W ++ + S ++ +E S LK L D R E +R
Sbjct: 517 SKSPSAWCHKYWIHWRAVKSALSVEKQLREITSKLKQ--LPDFPKETFEG-SRTE-LLRR 572
Query: 627 VICYGLYPGISSIVQNGKSSSLKTMED-GQVFLYSNSVNARESEIPYPWLVFNEKMKVNS 685
+C G + ++ + + + TM+ G + S E W++F++ +
Sbjct: 573 CLCAGYF---INVARRSAARTFCTMDGHGSIVYIHPSSTLYNQETRLEWIIFHDVTVTSK 629
Query: 686 VFLK 689
++++
Sbjct: 630 IYVR 633
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 418 (152.2 bits), Expect = 1.9e-58, Sum P(2) = 1.9e-58
Identities = 88/222 (39%), Positives = 138/222 (62%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP Y+ K +++ I N V ++ GETG GK+TQ+PQF+LE + + SI
Sbjct: 74 LLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHG--SI 131
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
TQPRR++A++++ RVA E G KLGE VGY VR + TRL + T G+LLR L+++
Sbjct: 132 AVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMN 191
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSR-RPELRLVLMSATLDAELFSSYFGGA 179
+L+ + +++DE HER + D +L LK L+ RP+LR+++MSATL AE FS +F A
Sbjct: 192 SDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNA 251
Query: 180 TVINIPGFTYPVRTHFL----EDILDMTGYRLTPYNQIDDYG 217
++ + G + V+ ++L +DI+D NQ ++ G
Sbjct: 252 PILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELG 293
Score = 260 (96.6 bits), Expect = 1.9e-58, Sum P(2) = 1.9e-58
Identities = 85/294 (28%), Positives = 144/294 (48%)
Query: 280 ICEKERPGAVLVFMTGWDDIN---SLNDKLQANRILGDPTRVLLLT---CHGSMASSEQR 333
I + E G +L F+ G ++I+ ++ +K+ + + D V L+ + ++ + +Q
Sbjct: 286 INQGEELGDILCFLPGQEEIDKAVTIMEKIA--KYVSDEAPVPLIVPYPLYAALPAVQQS 343
Query: 334 LIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTV 393
L+F + RK+V +TNIAETS+TI+ V FV+D G K + + LL IS
Sbjct: 344 LVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQA 403
Query: 394 SXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGF 453
S G+ +RLY Y + PEI R+ + S L +K R G +
Sbjct: 404 SAMQRSGRAGRESEGKSFRLYCESDYVKLPKQSEPEIARSDVTSPVLMLK--RYG-VDDL 460
Query: 454 LSRA-LQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFN 512
L+ ++P A+ ++ L +GALD ++T GQ +A+LP++P L +LI +
Sbjct: 461 LNWTWFENPGKEAIVMGLQELYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVG 520
Query: 513 CLEPVLTIVAGLSVRDPFL--APMDKKDLAEAAKS--QFSHDYSDHLALVRAFE 562
CL V+ IV+ LSV + L +P ++ ++ E S Y D + L F+
Sbjct: 521 CLSQVIDIVSCLSVENLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLKELFD 574
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 419 (152.6 bits), Expect = 3.5e-58, Sum P(3) = 3.5e-58
Identities = 84/191 (43%), Positives = 128/191 (67%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+LE R+ LP + + LL+ + N +VI+ GETG GKTTQ+ Q++ E T G +
Sbjct: 528 ILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDY-GMIG-- 584
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RV+ E G +LGE VGY +R E +T + + T GILLR L +
Sbjct: 585 -CTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLRE 643
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L + +I+DE HER +N D L +L+++++RR +L+LV+ SAT+DA+ F+S+FG
Sbjct: 644 ADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVP 703
Query: 181 VINIPGFTYPV 191
+ +IPG T+PV
Sbjct: 704 IFHIPGRTFPV 714
Score = 159 (61.0 bits), Expect = 3.5e-58, Sum P(3) = 3.5e-58
Identities = 54/220 (24%), Positives = 101/220 (45%)
Query: 485 LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK 544
LT G+ + P++P L KMLI+ C +L IV+ LSV F P +++ ++ +
Sbjct: 876 LTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVR 935
Query: 545 SQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDT 604
+F+ SDHL + + WK+ +C ++F+ A +M+ + +R + LKD
Sbjct: 936 EKFAVPESDHLTYLNVYLQWKNNNYSTL---WCNQHFIHAKAMRKVREVRAQ----LKDI 988
Query: 605 GLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQ-VFLYSNSV 663
+V S+ + G D +R IC + + + G+ +++T G L+ S
Sbjct: 989 -MVQQRMSLASC-GTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRT---GMPCHLHPTSS 1043
Query: 664 NARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFG 703
P ++V++E + +++ TAV L G
Sbjct: 1044 LFGMGYTP-DYIVYHELVMTTKEYMQCVTAVDGEWLAELG 1082
Score = 155 (59.6 bits), Expect = 3.5e-58, Sum P(3) = 3.5e-58
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVR 344
PG +LVFM G +DI ++++ + L + +L + + S Q IF + GVR
Sbjct: 743 PGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 802
Query: 345 KIVLATNIAETSITINDVVFVIDCGKAK 372
K ++ATNIAETS+T++ ++FVID G K
Sbjct: 803 KCIVATNIAETSLTVDGIMFVIDSGYCK 830
Score = 45 (20.9 bits), Expect = 8.8e-18, Sum P(3) = 8.8e-18
Identities = 11/48 (22%), Positives = 21/48 (43%)
Query: 219 EKMWKMSKQAPRKRKSQ--IASAVEDTLKAANFNEYSSQTRESLSCWN 264
E+ W+ S+Q R+R+ AS+ E K + + + W+
Sbjct: 126 EEFWERSRQRERERREHGVFASSKEKERKKEHSRDRGHDRKRDREDWD 173
Score = 44 (20.5 bits), Expect = 9.4e-35, Sum P(2) = 9.4e-35
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 225 SKQAPRKRKSQIASAVEDTLKAANFNEYSSQTRESLSCWNP 265
S+Q R+R + ASA+E+ + A E RE NP
Sbjct: 1094 SRQENRRRAKEEASAMEEEMALAE--EQLRARREEQERRNP 1132
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 419 (152.6 bits), Expect = 3.6e-58, Sum P(3) = 3.6e-58
Identities = 84/191 (43%), Positives = 128/191 (67%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+LE R+ LP + + LL+ + N +VI+ GETG GKTTQ+ Q++ E T G +
Sbjct: 531 ILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDY-GMIG-- 587
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RV+ E G +LGE VGY +R E +T + + T GILLR L +
Sbjct: 588 -CTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLRE 646
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L + +I+DE HER +N D L +L+++++RR +L+LV+ SAT+DA+ F+S+FG
Sbjct: 647 ADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVP 706
Query: 181 VINIPGFTYPV 191
+ +IPG T+PV
Sbjct: 707 IFHIPGRTFPV 717
Score = 159 (61.0 bits), Expect = 3.6e-58, Sum P(3) = 3.6e-58
Identities = 54/220 (24%), Positives = 101/220 (45%)
Query: 485 LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK 544
LT G+ + P++P L KMLI+ C +L IV+ LSV F P +++ ++ +
Sbjct: 882 LTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVR 941
Query: 545 SQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDT 604
+F+ SDHL + + WK+ +C ++F+ A +M+ + +R + LKD
Sbjct: 942 EKFAVPESDHLTYLNVYLQWKNNNYSTL---WCNQHFIHAKAMRKVREVRAQ----LKDI 994
Query: 605 GLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQ-VFLYSNSV 663
+V S+ + G D +R IC + + + G+ +++T G L+ S
Sbjct: 995 -MVQQRMSLASC-GTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRT---GMPCHLHPTSS 1049
Query: 664 NARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFG 703
P ++V++E + +++ TAV L G
Sbjct: 1050 LFGMGYTP-DYIVYHELVMTTKEYMQCVTAVDGEWLAELG 1088
Score = 155 (59.6 bits), Expect = 3.6e-58, Sum P(3) = 3.6e-58
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVR 344
PG +LVFM G +DI ++++ + L + +L + + S Q IF + GVR
Sbjct: 746 PGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 805
Query: 345 KIVLATNIAETSITINDVVFVIDCGKAK 372
K ++ATNIAETS+T++ ++FVID G K
Sbjct: 806 KCIVATNIAETSLTVDGIMFVIDSGYCK 833
Score = 45 (20.9 bits), Expect = 9.0e-18, Sum P(3) = 9.0e-18
Identities = 11/48 (22%), Positives = 21/48 (43%)
Query: 219 EKMWKMSKQAPRKRKSQ--IASAVEDTLKAANFNEYSSQTRESLSCWN 264
E+ W+ S+Q R+R+ AS+ E K + + + W+
Sbjct: 129 EEFWERSRQRERERREHGVFASSKEKERKKEHSRDRGHDRKRDREDWD 176
Score = 44 (20.5 bits), Expect = 9.6e-35, Sum P(2) = 9.6e-35
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 225 SKQAPRKRKSQIASAVEDTLKAANFNEYSSQTRESLSCWNP 265
S+Q R+R + ASA+E+ + A E RE NP
Sbjct: 1100 SRQENRRRAKEEASAMEEEMALAE--EQLRARREEQERRNP 1138
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 386 (140.9 bits), Expect = 5.1e-58, Sum P(3) = 5.1e-58
Identities = 75/195 (38%), Positives = 127/195 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+++ R+ LP Y + +L AI N+++I+ GETG GK+TQ+ Q++ E + + G +I
Sbjct: 431 IIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKY-HMYG---NI 486
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
ICTQPRRI+ ++++ RVA E K+G+ VGY +R + T++++ T G+ LR LL +
Sbjct: 487 ICTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYN 546
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+ ++ +I+DE HER ++ D +L ++KD+ + R +R+V+ SATLDAE S+YF A
Sbjct: 547 PTLEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFNCAP 606
Query: 181 VINIPGFTYPVRTHF 195
+ +PG Y V ++
Sbjct: 607 IFYVPGRKYNVDIYY 621
Score = 300 (110.7 bits), Expect = 5.1e-58, Sum P(3) = 5.1e-58
Identities = 93/364 (25%), Positives = 173/364 (47%)
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RKI+L+TNI ETSITI+++V+VID G K+ Y+ + L+ S S
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 404 XVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
+ G+C+RL+ + + ++ +PEI R + S+ L +KSL + I F L P
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINF--DFLDPPSP 920
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAI-FNCLEPVLTIVA 522
+ + +E L +GAL+ LT G+ +A P + K KM++ A +NC++ +L + +
Sbjct: 921 IVIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVAS 980
Query: 523 GLS-VRDPFLAPMDKKDLAEAAKSQFSHDYS-DHLALVRAFEGWKDAERGLAGYEYCWKN 580
L+ + F K+ AE K F + D L + + K E +C+ +
Sbjct: 981 MLTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIY---KQCEENNFSTSFCYDH 1037
Query: 581 FLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDE-RFIRAVICYGLYPGISSI 639
FL ++ + ++ + LS+ + +D + C + I+ I + +
Sbjct: 1038 FLQYHTLIKVKDVKTQLLSICEK---IDIPITTCGIENHESINNIKKSIVSAFFTNAALP 1094
Query: 640 VQNGKSSSLKTMEDGQVF-LYSNSVNARES---EIPYPWLVFNEKMKVNSVFLKDSTAVS 695
V + LK ++ QV +Y NSV +++ E ++F E +K+N +++ + V+
Sbjct: 1095 VNK---TELKIIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVN 1151
Query: 696 DSVL 699
++L
Sbjct: 1152 KNLL 1155
Score = 48 (22.0 bits), Expect = 5.1e-58, Sum P(3) = 5.1e-58
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 287 GAVLVFMTGWDDINSLNDKLQ--ANRILGDPTRVLLLTCHGSMASSEQRLIFDE 338
G +LVF+ G +I + +L+ N + +++L + S+ Q IF++
Sbjct: 647 GDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFED 700
Score = 44 (20.5 bits), Expect = 7.1e-22, Sum P(3) = 7.1e-22
Identities = 19/70 (27%), Positives = 26/70 (37%)
Query: 182 INIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVE 241
+N G T V LE M +D + K KM K +++ I S
Sbjct: 386 LNENGLTDVVEFVHLESFYGMNEKEKELEKLFEDIKKRKEKKMKKIIDERKRLPIYSYRY 445
Query: 242 DTLKAANFNE 251
D LKA N+
Sbjct: 446 DILKAIKNNK 455
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 386 (140.9 bits), Expect = 5.1e-58, Sum P(3) = 5.1e-58
Identities = 75/195 (38%), Positives = 127/195 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+++ R+ LP Y + +L AI N+++I+ GETG GK+TQ+ Q++ E + + G +I
Sbjct: 431 IIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKY-HMYG---NI 486
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
ICTQPRRI+ ++++ RVA E K+G+ VGY +R + T++++ T G+ LR LL +
Sbjct: 487 ICTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYN 546
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+ ++ +I+DE HER ++ D +L ++KD+ + R +R+V+ SATLDAE S+YF A
Sbjct: 547 PTLEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFNCAP 606
Query: 181 VINIPGFTYPVRTHF 195
+ +PG Y V ++
Sbjct: 607 IFYVPGRKYNVDIYY 621
Score = 300 (110.7 bits), Expect = 5.1e-58, Sum P(3) = 5.1e-58
Identities = 93/364 (25%), Positives = 173/364 (47%)
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RKI+L+TNI ETSITI+++V+VID G K+ Y+ + L+ S S
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 404 XVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
+ G+C+RL+ + + ++ +PEI R + S+ L +KSL + I F L P
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINF--DFLDPPSP 920
Query: 464 LAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAI-FNCLEPVLTIVA 522
+ + +E L +GAL+ LT G+ +A P + K KM++ A +NC++ +L + +
Sbjct: 921 IVIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVAS 980
Query: 523 GLS-VRDPFLAPMDKKDLAEAAKSQFSHDYS-DHLALVRAFEGWKDAERGLAGYEYCWKN 580
L+ + F K+ AE K F + D L + + K E +C+ +
Sbjct: 981 MLTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIY---KQCEENNFSTSFCYDH 1037
Query: 581 FLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDE-RFIRAVICYGLYPGISSI 639
FL ++ + ++ + LS+ + +D + C + I+ I + +
Sbjct: 1038 FLQYHTLIKVKDVKTQLLSICEK---IDIPITTCGIENHESINNIKKSIVSAFFTNAALP 1094
Query: 640 VQNGKSSSLKTMEDGQVF-LYSNSVNARES---EIPYPWLVFNEKMKVNSVFLKDSTAVS 695
V + LK ++ QV +Y NSV +++ E ++F E +K+N +++ + V+
Sbjct: 1095 VNK---TELKIIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVN 1151
Query: 696 DSVL 699
++L
Sbjct: 1152 KNLL 1155
Score = 48 (22.0 bits), Expect = 5.1e-58, Sum P(3) = 5.1e-58
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 287 GAVLVFMTGWDDINSLNDKLQ--ANRILGDPTRVLLLTCHGSMASSEQRLIFDE 338
G +LVF+ G +I + +L+ N + +++L + S+ Q IF++
Sbjct: 647 GDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFED 700
Score = 44 (20.5 bits), Expect = 7.1e-22, Sum P(3) = 7.1e-22
Identities = 19/70 (27%), Positives = 26/70 (37%)
Query: 182 INIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVE 241
+N G T V LE M +D + K KM K +++ I S
Sbjct: 386 LNENGLTDVVEFVHLESFYGMNEKEKELEKLFEDIKKRKEKKMKKIIDERKRLPIYSYRY 445
Query: 242 DTLKAANFNE 251
D LKA N+
Sbjct: 446 DILKAIKNNK 455
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 480 (174.0 bits), Expect = 5.7e-58, Sum P(2) = 5.7e-58
Identities = 137/420 (32%), Positives = 215/420 (51%)
Query: 286 PGAVLVFMTGWDDINSLNDKLQAN-RILGDPTRVLL-LTCHGSMASSEQRLIFDEPESGV 343
PG +LVF+TG ++I + + LQ R LG R LL L + ++ S Q IF G
Sbjct: 127 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 186
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXX 403
RK+V+ATNIAETS+TI +++V+D G K+ SY+ L + S S
Sbjct: 187 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 246
Query: 404 XVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
V G+C+RLY Y E +PEI RT L ++ L +KSL + + F L P
Sbjct: 247 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF--DFLDPPP 304
Query: 463 LLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ A+E L +GAL+H ELT G+ +A LP++P L KM++ ++C E +LT+ A
Sbjct: 305 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 364
Query: 523 GLSVRDP-FLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNF 581
LSV + F P DK A+ A+ F DHL L+ + W AE G + ++C++NF
Sbjct: 365 MLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQW--AESGYSS-QWCYENF 421
Query: 582 LSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQ 641
+ SM+ +R++ LL+ V+ S C D +R I G + + + +
Sbjct: 422 VQFRSMRRARDVREQLEGLLER---VEVGLSSCQG---DYIRVRKAITAGYFYHTARLTR 475
Query: 642 NGKSSSLKTMEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
+G +T++ Q VF++ NS + E + P WL+++E + F++ + S LL
Sbjct: 476 SG----YRTVKQQQTVFIHPNS-SLFEQQ-PR-WLLYHELVLTTKEFMRQVLEIESSWLL 528
Score = 149 (57.5 bits), Expect = 5.7e-58, Sum P(2) = 5.7e-58
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 129 VIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPGFT 188
V+VDE HER ++ D L ++KD+ RPEL++++ SAT+D FS++F A V IPG
Sbjct: 36 VMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRR 95
Query: 189 YPV 191
+PV
Sbjct: 96 FPV 98
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 371 (135.7 bits), Expect = 9.0e-58, Sum P(4) = 9.0e-58
Identities = 124/432 (28%), Positives = 200/432 (46%)
Query: 280 ICEKERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEP 339
I + E+ G +L F+T ++ ++ A P+ + L HG ++ EQ ++F
Sbjct: 515 IHKTEKEGTILAFLTSQAEVEWACERFVA------PSAIAL-PLHGKLSFEEQFMVFQN- 566
Query: 340 ESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXX 399
G RK++ ATNIAETS+TI V +VID G KE+ Y+ S L +S S
Sbjct: 567 YPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRA 626
Query: 400 XXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQ 459
+PG CYRLY + +D+ Q PEI R L L++ +L + IA F
Sbjct: 627 GRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAP 686
Query: 460 SPELLAVQNAIEYLKIIGAL-DHNE--ELTVLGQYLAMLPMEPKLGKMLILGAIFNCL-- 514
PE +A+ AI+ L +GA+ + N ELT G L L +EPKLGK LILG + +
Sbjct: 687 VPEAIAM--AIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGK-LILGCFRHRMGK 743
Query: 515 EPVLTIVAGLSVRDPF--LAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLA 572
E ++ + F + D K A+ K QF +D D L+ ++ W R
Sbjct: 744 EGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRR 803
Query: 573 GYEYCWKNFLSAPSMKVIDSLRKEF-LSLLKDTGLVDCDTSICNA-WG-RDERFIRAVIC 629
++CW+N L+A SM+ + KE + + ++ LV + N G + +++++ VI
Sbjct: 804 N-KWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHDKYLKMVIL 862
Query: 630 YGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLK 689
L ++ + + QV L+ + + P W+VF E + + +L
Sbjct: 863 ASLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLLAFGQKP-SWVVFGELLSIVDQYLV 921
Query: 690 DSTAVSDSVLLL 701
TA L +
Sbjct: 922 CVTAFDFEALYM 933
Score = 336 (123.3 bits), Expect = 9.0e-58, Sum P(4) = 9.0e-58
Identities = 71/185 (38%), Positives = 114/185 (61%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP Y + ++L I Q++++ GETG GK+TQ+ QF+ +S + + SI+CTQPR+
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASE----SIVCTQPRK 358
Query: 68 ISAMSVSERVASERGEKLGES-VGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGV 126
I+AM++++RV E E+ V + +++++ T LL+ + DR+L G+
Sbjct: 359 IAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGI 418
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+ VI+DE HER +N D LL +L+ LLSRR +LRLV+MSAT DA S Y ++++ G
Sbjct: 419 SCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNG 478
Query: 187 FTYPV 191
+PV
Sbjct: 479 RNFPV 483
Score = 44 (20.5 bits), Expect = 9.0e-58, Sum P(4) = 9.0e-58
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 737 IRRELDELIQNKLLN 751
+RREL+EL++ K +N
Sbjct: 1394 MRRELEELLRGKPIN 1408
Score = 37 (18.1 bits), Expect = 9.0e-58, Sum P(4) = 9.0e-58
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 684 NSVFLKDSTAVSDSVLLLFGGSISQGEI 711
N V ++ +DS+L+ G +S+ E+
Sbjct: 1200 NYVHIQRDQLSNDSILISGLGDLSEAEV 1227
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 353 (129.3 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 74/192 (38%), Positives = 118/192 (61%)
Query: 9 PAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRRI 68
P K++ +L+ A+ N +I++G TG GKTTQ+P+++ E+ S G + TQPR++
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF-SQHGMIG---VTQPRKV 109
Query: 69 SAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTH 128
+A+SV++RVA E LG VGY+VR + ++T + + T G LL+ +L D NL +
Sbjct: 110 AAISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSV 169
Query: 129 VIVDEVHERGMNEDFLLIVLKDLL-----SRRPELRLVLMSATLDAELFSSYFGGATVIN 183
+I+DE HER + D L +LK L +R+ L++V+MSAT++ S++FG + +
Sbjct: 170 IILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFD 229
Query: 184 IPGFTYPVRTHF 195
IPG YPVR F
Sbjct: 230 IPGRLYPVREKF 241
Score = 324 (119.1 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 109/424 (25%), Positives = 194/424 (45%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKL--QANRI-----LGDPTR--VLLLTCHGSMASSEQRL 334
E G +LVF+TG +I + L A + + D T +L+L C+GSM + +QR
Sbjct: 270 EMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRR 329
Query: 335 IFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVS 394
IF P G+RK V++TNI+ TS+TI+ + +V+D G K+ +++ L IS
Sbjct: 330 IFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSE 389
Query: 395 XXXXXXXXXXVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGF 453
G+C+R+Y + ++ ++ +PEI RT L S+ L +K L + + F
Sbjct: 390 ALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRF 449
Query: 454 LSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNC 513
L P + A++ L A+D + +T LG + P+ P L +I A +C
Sbjct: 450 --PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDC 507
Query: 514 LEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK-----SQFSHDYSDHLALVRAFEGWKDAE 568
+ +L I A LSV + F+ P+D + EA + + + ++D L FE K +
Sbjct: 508 EDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSG 567
Query: 569 RGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVI 628
+ + W ++ S +++ +E + LK +T G +R +
Sbjct: 568 APASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFE----GPKHEVLRRCL 623
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQ---VFLYSNSVNARESEIPYPWLVFNEKMKVNS 685
C G + ++ + + TM DG+ V ++ N E E W++F+E +
Sbjct: 624 CAGYF---KNVARRSVGRTFCTM-DGRGSPVHIHQNC-KLHEQETKLEWIIFHEVLVTTK 678
Query: 686 VFLK 689
V+ +
Sbjct: 679 VYAR 682
Score = 46 (21.3 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 549 HDYSDH-LALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV 607
H+++ H L+ V E +DA R W N + +KV D + KE L ++
Sbjct: 700 HEFNAHDLSSVARREVREDARRR-------WTNKENVKHLKVSDGISKEVLKRMQRRN-- 750
Query: 608 DCDTSICNAWGR 619
D D SI +A R
Sbjct: 751 D-DKSISDARAR 761
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 354 (129.7 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 74/192 (38%), Positives = 118/192 (61%)
Query: 9 PAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRRI 68
P K++ +L+ A+ N +I++G TG GKTTQ+P+++ E+ S G + TQPR++
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF-SQHGMIG---VTQPRKV 109
Query: 69 SAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTH 128
+A+SV++RVA E LG VGY+VR + ++T + + T G LL+ +L D NL +
Sbjct: 110 AAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSV 169
Query: 129 VIVDEVHERGMNEDFLLIVLKDLL-----SRRPELRLVLMSATLDAELFSSYFGGATVIN 183
+I+DE HER + D L +LK L +R+ L++V+MSAT++ S++FG + +
Sbjct: 170 IILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFD 229
Query: 184 IPGFTYPVRTHF 195
IPG YPVR F
Sbjct: 230 IPGRLYPVREKF 241
Score = 322 (118.4 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 109/424 (25%), Positives = 194/424 (45%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKL--QANRI-----LGDPTR--VLLLTCHGSMASSEQRL 334
E G +LVF+TG +I + L A + + D T +L+L C+GSM + +QR
Sbjct: 270 EMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRR 329
Query: 335 IFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVS 394
IF P G+RK V++TNI+ TS+TI+ + +V+D G K+ +++ L IS
Sbjct: 330 IFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSE 389
Query: 395 XXXXXXXXXXVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGF 453
G+C+R+Y + ++ ++ +PEI RT L S+ L +K L + + F
Sbjct: 390 ALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRF 449
Query: 454 LSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNC 513
L P + A++ L A+D + +T LG + P+ P L +I A +C
Sbjct: 450 --PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDC 507
Query: 514 LEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQF-----SHDYSDHLALVRAFEGWKDAE 568
+ +L I A LSV + F+ P+D + EA + + ++D L FE K +
Sbjct: 508 EDLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFNDFATLAVIFEQCKSSG 567
Query: 569 RGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVI 628
+ + W ++ S +++ +E + LK +T G +R +
Sbjct: 568 APASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFE----GPKHEVLRRCL 623
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQ---VFLYSNSVNARESEIPYPWLVFNEKMKVNS 685
C G + ++ + + TM DG+ V ++ +S E E W++F+E +
Sbjct: 624 CAGYF---KNVARRSVGRTFCTM-DGRGSPVHIHPSSA-LHEQETKLEWIIFHEVLVTTK 678
Query: 686 VFLK 689
V+ +
Sbjct: 679 VYAR 682
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 353 (129.3 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 74/192 (38%), Positives = 118/192 (61%)
Query: 9 PAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRRI 68
P K++ +L+ A+ N +I++G TG GKTTQ+P+++ E+ S G + TQPR++
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF-SQHGMIG---VTQPRKV 109
Query: 69 SAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTH 128
+A+SV++RVA E LG VGY+VR + ++T + + T G LL+ +L D NL +
Sbjct: 110 AAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSV 169
Query: 129 VIVDEVHERGMNEDFLLIVLKDLL-----SRRPELRLVLMSATLDAELFSSYFGGATVIN 183
+I+DE HER + D L +LK L +R+ L++V+MSAT++ S++FG + +
Sbjct: 170 IILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFD 229
Query: 184 IPGFTYPVRTHF 195
IPG YPVR F
Sbjct: 230 IPGRLYPVREKF 241
Score = 323 (118.8 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 109/424 (25%), Positives = 195/424 (45%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKL--QANRI-----LGDPTR--VLLLTCHGSMASSEQRL 334
E G +LVF+TG +I + L A + + D T +L+L C+GSM + +QR
Sbjct: 270 EMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRR 329
Query: 335 IFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVS 394
IF P G+RK V++TNI+ TS+TI+ + +V+D G K+ +++ L IS
Sbjct: 330 IFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSE 389
Query: 395 XXXXXXXXXXVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGF 453
G+C+R+Y + ++ ++ +PEI RT L S+ L +K L + + F
Sbjct: 390 ALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRF 449
Query: 454 LSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNC 513
L P + A++ L A+D + +T LG + P+ P L +I A +C
Sbjct: 450 --PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDC 507
Query: 514 LEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK-----SQFSHDYSDHLALVRAFEGWKDAE 568
+ +L I A LSV + F+ P+D + EA + + + ++D L FE K +
Sbjct: 508 EDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSG 567
Query: 569 RGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVI 628
+ + W ++ S +++ +E + LK +T G +R +
Sbjct: 568 APASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFE----GPKHEVLRRCL 623
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQ---VFLYSNSVNARESEIPYPWLVFNEKMKVNS 685
C G + ++ + + TM DG+ V ++ +S E E W++F+E +
Sbjct: 624 CAGYF---KNVARRSVGRTFCTM-DGRGSPVHIHPSSA-LHEQETKLEWIIFHEVLVTTK 678
Query: 686 VFLK 689
V+ +
Sbjct: 679 VYAR 682
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 353 (129.3 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 74/192 (38%), Positives = 118/192 (61%)
Query: 9 PAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRRI 68
P K++ +L+ A+ N +I++G TG GKTTQ+P+++ E+ S G + TQPR++
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF-SQHGMIG---VTQPRKV 109
Query: 69 SAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTH 128
+A+SV++RVA E LG VGY+VR + ++T + + T G LL+ +L D NL +
Sbjct: 110 AAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSV 169
Query: 129 VIVDEVHERGMNEDFLLIVLKDLL-----SRRPELRLVLMSATLDAELFSSYFGGATVIN 183
+I+DE HER + D L +LK L +R+ L++V+MSAT++ S++FG + +
Sbjct: 170 IILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFD 229
Query: 184 IPGFTYPVRTHF 195
IPG YPVR F
Sbjct: 230 IPGRLYPVREKF 241
Score = 323 (118.8 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 109/424 (25%), Positives = 195/424 (45%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKL--QANRI-----LGDPTR--VLLLTCHGSMASSEQRL 334
E G +LVF+TG +I + L A + + D T +L+L C+GSM + +QR
Sbjct: 270 EMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRR 329
Query: 335 IFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVS 394
IF P G+RK V++TNI+ TS+TI+ + +V+D G K+ +++ L IS
Sbjct: 330 IFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSE 389
Query: 395 XXXXXXXXXXVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGF 453
G+C+R+Y + ++ ++ +PEI RT L S+ L +K L + + F
Sbjct: 390 ALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRF 449
Query: 454 LSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNC 513
L P + A++ L A+D + +T LG + P+ P L +I A +C
Sbjct: 450 --PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDC 507
Query: 514 LEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK-----SQFSHDYSDHLALVRAFEGWKDAE 568
+ +L I A LSV + F+ P+D + EA + + + ++D L FE K +
Sbjct: 508 EDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSG 567
Query: 569 RGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVI 628
+ + W ++ S +++ +E + LK +T G +R +
Sbjct: 568 APASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFE----GPKHEVLRRCL 623
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQ---VFLYSNSVNARESEIPYPWLVFNEKMKVNS 685
C G + ++ + + TM DG+ V ++ +S E E W++F+E +
Sbjct: 624 CAGYF---KNVARRSVGRTFCTM-DGRGSPVHIHPSSA-LHEQETKLEWIIFHEVLVTTK 678
Query: 686 VFLK 689
V+ +
Sbjct: 679 VYAR 682
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 386 (140.9 bits), Expect = 1.8e-57, Sum P(4) = 1.8e-57
Identities = 81/241 (33%), Positives = 136/241 (56%)
Query: 320 LLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDAL 379
+L + + + +Q +F++P G R ++ATN+AETS+TI + +V+DCG++KE Y+
Sbjct: 773 VLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAETSLTIPGIRYVVDCGRSKERKYNQE 832
Query: 380 NNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSL 438
N W+S S PG CYRLY V+ D F ++ +PEILR P +S+
Sbjct: 833 NGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLYSSAVFEDFFPQFSVPEILRMPFESI 892
Query: 439 CLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNE-ELTVLGQYLAMLPM 497
L +KS+ + IA F P+ +++ A E L I+GALD + ++T LG+ +++ P+
Sbjct: 893 VLSMKSMGIDQIANFPFPT--PPDRFSLKKAEELLVILGALDKEQKQITDLGKKMSLFPL 950
Query: 498 EPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKK-DLAEAAKSQFSHDYSDHLA 556
P+ K+LI+G CL ++ IV+ LSV DPF+ + ++ + A+ +F + A
Sbjct: 951 SPRFAKILIIGNQQECLSYIIAIVSALSVGDPFIGENELVGNMNDEARREFRTKFYHSRA 1010
Query: 557 L 557
L
Sbjct: 1011 L 1011
Score = 274 (101.5 bits), Expect = 1.8e-57, Sum P(4) = 1.8e-57
Identities = 62/158 (39%), Positives = 99/158 (62%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCS--IIC 62
R LP + E++R++ A+ + +I+ GETG GKTTQVPQF+ E+ ++ + I
Sbjct: 440 RALLPVFAEEHRIMEAVYHHDCIILCGETGSGKTTQVPQFLYEAGFGNLLHDLYPGMIGV 499
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGM---KGRD--TRLLFCTTGILLRRL 117
TQPRR++A+S++ERV SE G+ G VGY++R + +G++ T L F T G+LLR +
Sbjct: 500 TQPRRVAAVSMAERVGSELGDH-GHRVGYQIRFDTTIKNEGKENGTALKFMTDGVLLREM 558
Query: 118 LVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRR 155
+ D L + +I+DE HER +N D L+ +L ++ R
Sbjct: 559 MTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLR 596
Score = 147 (56.8 bits), Expect = 2.7e-44, Sum P(4) = 2.7e-44
Identities = 43/133 (32%), Positives = 68/133 (51%)
Query: 80 ERGEKLGESVGYK--VRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEVHER 137
+ G ++G + + ++ EG K T L F T G+LLR ++ D L + +I+DE HER
Sbjct: 520 DHGHRVGYQIRFDTTIKNEG-KENGTALKFMTDGVLLREMMTDFLLAKYSAIIIDEAHER 578
Query: 138 GMNEDFLLIVLKDLLSRR-------PEL----RLVLMSATLDAELFSS----YFGGATVI 182
+N D L+ +L ++ R P+L +L++MSATL FS + +I
Sbjct: 579 NINTDILIGMLTRVVKLRRKYHKENPQLYKPLKLIIMSATLRVSDFSENPALFKTPPPII 638
Query: 183 NIPGFTYPVRTHF 195
N+ YPV HF
Sbjct: 639 NVQARQYPVSIHF 651
Score = 58 (25.5 bits), Expect = 1.8e-57, Sum P(4) = 1.8e-57
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 278 CYICEKERPGAVLVFMTGWDDINSLNDKLQ 307
C I K G +L+F+TG ++I +L KL+
Sbjct: 668 CKIHRKLPEGGILIFLTGQNEITTLVKKLR 697
Score = 57 (25.1 bits), Expect = 1.8e-57, Sum P(4) = 1.8e-57
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 651 MEDGQ-VFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDST 692
+EDG V+L+ NS+ A +IP +LV+ + + +D T
Sbjct: 1138 IEDGPFVYLHPNSLIAESGQIPSSYLVY-QSLSTKGNISEDET 1179
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 353 (129.3 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 74/192 (38%), Positives = 118/192 (61%)
Query: 9 PAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRRI 68
P K++ +L+ A+ N +I++G TG GKTTQ+P+++ E+ S G + TQPR++
Sbjct: 132 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF-SQHGMIG---VTQPRKV 187
Query: 69 SAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTH 128
+A+SV++RVA E LG VGY+VR + ++T + + T G LL+ +L D NL +
Sbjct: 188 AAISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSV 247
Query: 129 VIVDEVHERGMNEDFLLIVLKDLL-----SRRPELRLVLMSATLDAELFSSYFGGATVIN 183
+I+DE HER + D L +LK L +R+ L++V+MSAT++ S++FG + +
Sbjct: 248 IILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFD 307
Query: 184 IPGFTYPVRTHF 195
IPG YPVR F
Sbjct: 308 IPGRLYPVREKF 319
Score = 323 (118.8 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 109/424 (25%), Positives = 195/424 (45%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKL--QANRI-----LGDPTR--VLLLTCHGSMASSEQRL 334
E G +LVF+TG +I + L A + + D T +L+L C+GSM + +QR
Sbjct: 348 EMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRR 407
Query: 335 IFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVS 394
IF P G+RK V++TNI+ TS+TI+ + +V+D G K+ +++ L IS
Sbjct: 408 IFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSE 467
Query: 395 XXXXXXXXXXVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGF 453
G+C+R+Y + ++ ++ +PEI RT L S+ L +K L + + F
Sbjct: 468 ALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRF 527
Query: 454 LSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNC 513
L P + A++ L A+D + +T LG + P+ P L +I A +C
Sbjct: 528 --PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDC 585
Query: 514 LEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK-----SQFSHDYSDHLALVRAFEGWKDAE 568
+ +L I A LSV + F+ P+D + EA + + + ++D L FE K +
Sbjct: 586 EDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSG 645
Query: 569 RGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVI 628
+ + W ++ S +++ +E + LK +T G +R +
Sbjct: 646 APASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFE----GPKHEVLRRCL 701
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQ---VFLYSNSVNARESEIPYPWLVFNEKMKVNS 685
C G + ++ + + TM DG+ V ++ +S E E W++F+E +
Sbjct: 702 CAGYF---KNVARRSVGRTFCTM-DGRGSPVHIHPSSA-LHEQETKLEWIIFHEVLVTTK 756
Query: 686 VFLK 689
V+ +
Sbjct: 757 VYAR 760
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 354 (129.7 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 74/192 (38%), Positives = 118/192 (61%)
Query: 9 PAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRRI 68
P K++ +L+ A+ N +I++G TG GKTTQ+P+++ E+ S G + TQPR++
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF-SQHGMIG---VTQPRKV 109
Query: 69 SAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTH 128
+A+SV++RVA E LG VGY+VR + ++T + + T G LL+ +L D NL +
Sbjct: 110 AAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSV 169
Query: 129 VIVDEVHERGMNEDFLLIVLKDLL-----SRRPELRLVLMSATLDAELFSSYFGGATVIN 183
+I+DE HER + D L +LK L +R+ L++V+MSAT++ S++FG + +
Sbjct: 170 IILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFD 229
Query: 184 IPGFTYPVRTHF 195
IPG YPVR F
Sbjct: 230 IPGRLYPVREKF 241
Score = 320 (117.7 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 109/424 (25%), Positives = 194/424 (45%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKL--QANRI-----LGDPTR--VLLLTCHGSMASSEQRL 334
E G +LVF+TG +I + L A + + D T +L+L C+GSM + +QR
Sbjct: 270 EMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRR 329
Query: 335 IFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVS 394
IF P G+RK V++TNI+ TS+TI+ + +V+D G K+ +++ L IS
Sbjct: 330 IFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSE 389
Query: 395 XXXXXXXXXXVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGF 453
G+C+R+Y + + ++ +PEI RT L S+ L +K L + + F
Sbjct: 390 ALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRF 449
Query: 454 LSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNC 513
L P + A++ L A+D + +T LG + P+ P L +I A +C
Sbjct: 450 --PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDC 507
Query: 514 LEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK-----SQFSHDYSDHLALVRAFEGWKDAE 568
+ +L I A LSV + F+ P+D + EA + + + ++D L FE K +
Sbjct: 508 EDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSG 567
Query: 569 RGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVI 628
+ + W ++ S +++ +E + LK +T G +R +
Sbjct: 568 APASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFE----GPKHEVLRRCL 623
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQ---VFLYSNSVNARESEIPYPWLVFNEKMKVNS 685
C G + ++ + + TM DG+ V ++ +S E E W++F+E +
Sbjct: 624 CAGYF---KNVARRSVGRTFCTM-DGRGSPVHIHPSSA-LHEQETKLEWIIFHEVLVTTK 678
Query: 686 VFLK 689
V+ +
Sbjct: 679 VYAR 682
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 351 (128.6 bits), Expect = 2.8e-57, Sum P(2) = 2.8e-57
Identities = 73/192 (38%), Positives = 118/192 (61%)
Query: 9 PAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRRI 68
P K++ +++ A+ N +I++G TG GKTTQ+P+++ E+ S G + TQPR++
Sbjct: 54 PIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF-SQHGMIG---VTQPRKV 109
Query: 69 SAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTH 128
+A+SV++RVA E LG VGY+VR + ++T + + T G LL+ +L D NL +
Sbjct: 110 AAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSV 169
Query: 129 VIVDEVHERGMNEDFLLIVLKDLL-----SRRPELRLVLMSATLDAELFSSYFGGATVIN 183
+I+DE HER + D L +LK L +R+ L++V+MSAT++ S++FG + +
Sbjct: 170 IILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFD 229
Query: 184 IPGFTYPVRTHF 195
IPG YPVR F
Sbjct: 230 IPGRLYPVREKF 241
Score = 323 (118.8 bits), Expect = 2.8e-57, Sum P(2) = 2.8e-57
Identities = 109/424 (25%), Positives = 195/424 (45%)
Query: 284 ERPGAVLVFMTGWDDINSLNDKL--QANRI-----LGDPTR--VLLLTCHGSMASSEQRL 334
E G +LVF+TG +I + L A + + D T +L+L C+GSM + +QR
Sbjct: 270 EMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRR 329
Query: 335 IFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVS 394
IF P G+RK V++TNI+ TS+TI+ + +V+D G K+ +++ L IS
Sbjct: 330 IFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSE 389
Query: 395 XXXXXXXXXXVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGF 453
G+C+R+Y + ++ ++ +PEI RT L S+ L +K L + + F
Sbjct: 390 ALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRF 449
Query: 454 LSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNC 513
L P + A++ L A+D + +T LG + P+ P L +I A +C
Sbjct: 450 --PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDC 507
Query: 514 LEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK-----SQFSHDYSDHLALVRAFEGWKDAE 568
+ +L I A LSV + F+ P+D + EA + + + ++D L FE K +
Sbjct: 508 EDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSG 567
Query: 569 RGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVI 628
+ + W ++ S +++ +E + LK +T G +R +
Sbjct: 568 APASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFE----GPKHEVLRRCL 623
Query: 629 CYGLYPGISSIVQNGKSSSLKTMEDGQ---VFLYSNSVNARESEIPYPWLVFNEKMKVNS 685
C G + ++ + + TM DG+ V ++ +S E E W++F+E +
Sbjct: 624 CAGYF---KNVARRSVGRTFCTM-DGRGSPVHIHPSSA-LHEQETKLEWIIFHEVLVTTK 678
Query: 686 VFLK 689
V+ +
Sbjct: 679 VYAR 682
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 352 (129.0 bits), Expect = 1.7e-56, Sum P(4) = 1.7e-56
Identities = 122/432 (28%), Positives = 197/432 (45%)
Query: 280 ICEKERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEP 339
I + E+ G +L F+T ++ + R + P+ + L HG ++ EQ +F
Sbjct: 518 IHKTEKEGTILAFLTSQAEV-----EWACERFI-TPSAIAL-PLHGKLSFEEQFRVFQN- 569
Query: 340 ESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXX 399
G RK++ ATNIAETS+TI V +VID G KE+ Y+ S L +S S
Sbjct: 570 HPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRA 629
Query: 400 XXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQ 459
+PG CYRLY + +D+ Q PEI R L L++ +L + IA F
Sbjct: 630 GRAGRTEPGRCYRLYSKNDFDSMNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAP 689
Query: 460 SPELLAVQNAIEYLKIIGAL-DHN--EELTVLGQYLAMLPMEPKLGKMLILGAIFNCL-- 514
PE +A+ A++ L +GA+ + N ELT G L L +EPKLGK LILG + +
Sbjct: 690 VPEAIAM--AVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLGK-LILGCFRHRMGK 746
Query: 515 EPVLTIVAGLSVRDPF--LAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLA 572
E ++ + F + D K A+ K QF + D L+ ++ W R
Sbjct: 747 EGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNQNGDLFTLLSVYKEWASLPRERR 806
Query: 573 GYEYCWKNFLSAPSMKVIDSLRKEF-LSLLKDTGLVDCDTSICNA-WG-RDERFIRAVIC 629
++CW+N L+A SM+ + KE + + ++ LV + N G + ++ ++ VI
Sbjct: 807 N-KWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHDKHLKMVIL 865
Query: 630 YGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLK 689
L ++ + + QV L+ + + P W+VF E + + +L
Sbjct: 866 ASLAENVAMYTGYNQLGYEVALTGQQVQLHPSCSLLAFGQKP-SWVVFGELLSIVDQYLV 924
Query: 690 DSTAVSDSVLLL 701
TA L +
Sbjct: 925 CVTACDFEALYM 936
Score = 347 (127.2 bits), Expect = 1.7e-56, Sum P(4) = 1.7e-56
Identities = 73/185 (39%), Positives = 116/185 (62%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP Y + ++L I + Q++++ GETG GK+TQ+ QF+ +S + + SI+CTQPR+
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASE----SIVCTQPRK 361
Query: 68 ISAMSVSERVASERGEKLGES-VGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGV 126
I+AM++++RV E E+ V + +++++ T LL+ + DR+L G+
Sbjct: 362 IAAMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGI 421
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+ VI+DE HER +N D LL +LK LLSRR +LRLV+MSAT DA+ S YF ++ + G
Sbjct: 422 SCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNG 481
Query: 187 FTYPV 191
+PV
Sbjct: 482 RNFPV 486
Score = 41 (19.5 bits), Expect = 1.7e-56, Sum P(4) = 1.7e-56
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 737 IRRELDELIQNKLLN 751
+RREL+EL++ + +N
Sbjct: 1397 MRRELEELLRGRPIN 1411
Score = 38 (18.4 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 182 INIPGFTYPVRTHFL 196
IN PGFT V H +
Sbjct: 1410 INHPGFTRRVLQHLM 1424
Score = 37 (18.1 bits), Expect = 1.7e-56, Sum P(4) = 1.7e-56
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 684 NSVFLKDSTAVSDSVLLLFGGSISQGEI 711
N V ++ +DS+L+ G +S+ E+
Sbjct: 1203 NYVHIQRDQQSNDSILISGLGDLSEAEV 1230
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 347 (127.2 bits), Expect = 1.0e-55, Sum P(5) = 1.0e-55
Identities = 84/242 (34%), Positives = 132/242 (54%)
Query: 292 FMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATN 351
F G +DI + +D+ A P VL L + ++ +S+Q +F P G R +V+ATN
Sbjct: 827 FEIGKEDIITEDDEKPAG-----PLFVLPL--YSTLPTSKQMRVFQTPPLGSRLVVVATN 879
Query: 352 IAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECY 411
+AETS+TI ++ +V+D G+ K+ Y+ N S W S S PG CY
Sbjct: 880 LAETSLTIPNIKYVVDTGRVKQRYYNKDNGISSFEVGWTSKASADQRAGRAGRTGPGHCY 939
Query: 412 RLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAI 470
R+Y V+ D F ++ PEIL P+ + LQ+KS+ + I GF P+ +++ A+
Sbjct: 940 RIYSSAVFNDHFQQFSKPEILMIPIDGMILQMKSMGIQKITGFPFPT--PPDESSLKLAL 997
Query: 471 EYLKIIGALDHNE-ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDP 529
L +GAL+ +T LG ++ P+ P+ KML+LG NCL ++ IV+ L+V+DP
Sbjct: 998 RTLINLGALEVKTFSITELGMKMSQFPVSPRHSKMLLLGQEHNCLPYIIAIVSILTVKDP 1057
Query: 530 FL 531
FL
Sbjct: 1058 FL 1059
Score = 283 (104.7 bits), Expect = 1.0e-55, Sum P(5) = 1.0e-55
Identities = 65/159 (40%), Positives = 95/159 (59%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVR-GAVCSII-C 62
R NLP E++ ++ I N VVII GETG GKTTQVPQF+ ES G II
Sbjct: 402 RDNLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRESGDFPGIIGV 461
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEG-MKGRDTRLLFCTTGILLRRLLVDR 121
TQPRR++A+S ++RVA E + G+ VGY++R + + ++ F T GIL+R + D
Sbjct: 462 TQPRRVAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKFMTDGILMREVQTDF 521
Query: 122 NLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRL 160
L + +++DE HER +N D L+ +L ++ R +L L
Sbjct: 522 LLSQYSSILIDEAHERNLNTDILIGLLSRIVPLRKKLYL 560
Score = 68 (29.0 bits), Expect = 1.0e-55, Sum P(5) = 1.0e-55
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 158 LRLVLMSATLDAELFSS----YFGGATVINIPGFTYPVRTHF 195
L+LV+MSATL E F+ + VINIP +PV HF
Sbjct: 580 LKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHF 621
Score = 59 (25.8 bits), Expect = 1.0e-55, Sum P(5) = 1.0e-55
Identities = 25/79 (31%), Positives = 35/79 (44%)
Query: 576 YCWKNFLSAPSMKVIDSLRK---EFLSLLKDTG------------LVDCDTSICNAWGRD 620
+C +NFL+ SM I LR E ++ + T LV+ D SI +
Sbjct: 1144 FCSQNFLNTKSMSEIHKLRHQLTEIVNSINQTNHELDPISNPIITLVNPDQSIKPPTQKQ 1203
Query: 621 ERFIRAVICYGLYPGISSI 639
E FI+ VI GL IS +
Sbjct: 1204 ELFIKQVITAGLIDQISKV 1222
Score = 52 (23.4 bits), Expect = 1.0e-55, Sum P(5) = 1.0e-55
Identities = 20/53 (37%), Positives = 26/53 (49%)
Query: 265 PDCIGFN----LIEYV-LCYI----CEKERP-GAVLVFMTGWDDINSLNDKLQ 307
P I FN L+ Y+ CY K P G +LVF+TG +I L KL+
Sbjct: 616 PVTIHFNKKTELVNYIDECYKKVVKIHKNLPSGGILVFVTGKQEIEYLCSKLR 668
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 412 (150.1 bits), Expect = 1.3e-54, Sum P(2) = 1.3e-54
Identities = 109/419 (26%), Positives = 214/419 (51%)
Query: 283 KERPGA--VLVFMTGWDDINSLNDKLQ--ANRILGDPTRVLLLTCHGSMASSEQRLIFDE 338
+E P + +LVF+TG ++I +++ + A + +L+L + S+ ++Q +F
Sbjct: 193 QEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQG 252
Query: 339 PESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXX 398
G RK++++TNIAETSITI + +V+D G K Y+ + L +S
Sbjct: 253 APKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 312
Query: 399 XXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRAL 458
G CYRLY ++ F + +PEI R L S+ LQ+ ++++ + F +
Sbjct: 313 TGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSK 372
Query: 459 QSPELLAVQNAIEYLKIIGALDHNEE---LTVLGQYLAMLPMEPKLGKMLILGAIFNCLE 515
SP+ +Q AI L ++GAL+H ++ LT +G+ +A P+EPK K +++ F+C E
Sbjct: 373 PSPD--HIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTE 430
Query: 516 PVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGY- 574
+LTIV+ LSV P +++ + + +F DH+ L+ + +K+ L G
Sbjct: 431 EILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKN----LGGNK 486
Query: 575 EYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYP 634
++C +NF+++ +M ++ +R + L+D L I ++ G D +R + + L+
Sbjct: 487 DWCKENFVNSKNMTLVAEVRAQ----LRDICL-KMSMPIASSRG-DVESVRRCLAHSLFM 540
Query: 635 GISSIVQNGKSSSLKTMEDGQVFLYSNSV--NARESEIPYPWLVFNEKMKVNSVFLKDS 691
+ + +G ++ T + V ++ +SV + + + + Y L++ K + + + D+
Sbjct: 541 STAELQPDGTYATTDTHQP--VAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDA 597
Score = 221 (82.9 bits), Expect = 1.3e-54, Sum P(2) = 1.3e-54
Identities = 49/123 (39%), Positives = 73/123 (59%)
Query: 78 ASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEVHER 137
+SE SVGY VR + + DTR+ F T G+LLR + D L+ + VI+DE HER
Sbjct: 50 SSETWTTRSSSVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHER 109
Query: 138 GMNEDFLLIVLKDLLSRRPEL-----RLVLMSATLDAELFSSYFGGATVINIPGFTYPVR 192
++ D L V+K RR EL ++++MSAT+D +LFS YF GA V+ + G +P++
Sbjct: 110 TIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQ 169
Query: 193 THF 195
+
Sbjct: 170 VFY 172
>UNIPROTKB|I3LRU8 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:FP312685
Ensembl:ENSSSCT00000027576 Uniprot:I3LRU8
Length = 439
Score = 568 (205.0 bits), Expect = 1.5e-54, P = 1.5e-54
Identities = 110/208 (52%), Positives = 151/208 (72%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M FR LP+Y + L+ I +QV +ISGETGCGKTTQV QFIL++ I +G+ C I
Sbjct: 204 MQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRI 263
Query: 61 ICTQPRRISAMSVSERVASERGEKLGE--SVGYKVRLEG-MKGRDTRLLFCTTGILLRRL 117
+CTQPRRISA+SV+ERVA+ER E G S GY++RL+ + + +L+CTTGI+L+ L
Sbjct: 264 VCTQPRRISAISVAERVAAERAETCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 323
Query: 118 LVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG 177
D +L V+H+++DE+HER + D L+ V+KDLLS RP+L++VLMSATL+AE FS YFG
Sbjct: 324 QSDPHLSSVSHILLDEIHERNLQSDVLMTVIKDLLSYRPDLKVVLMSATLNAEKFSEYFG 383
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGY 205
+I+IPGFT+PV + LEDI++ Y
Sbjct: 384 NCPMIHIPGFTFPVVEYLLEDIIEKIRY 411
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 301 (111.0 bits), Expect = 3.8e-54, Sum P(5) = 3.8e-54
Identities = 66/159 (41%), Positives = 102/159 (64%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILE----SEITSVRGAVC 58
E R++LP + ++ AI+++ VIISG+TGCGKTTQVPQF+ E S+ S R +
Sbjct: 236 ETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGII 295
Query: 59 SIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLL 118
I TQPRR++ ++ ++RVA E G +LG+ VG++VR + G ++ + F T GILLR +
Sbjct: 296 GI--TQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQ 353
Query: 119 VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE 157
D L+ + +I+DE HER +N D L+ +L ++ R E
Sbjct: 354 NDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQE 392
Score = 295 (108.9 bits), Expect = 3.8e-54, Sum P(5) = 3.8e-54
Identities = 65/193 (33%), Positives = 103/193 (53%)
Query: 315 PTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKET 374
P ++ +L + ++ + Q +F+E E R +V+ATN+AETS+TI + +V+D G+ K
Sbjct: 644 PGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVK 703
Query: 375 SYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVY-DAFAEYQLPEILRT 433
+YD+ WIS S PG CYRLY V+ + F E LPEI++
Sbjct: 704 NYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKV 763
Query: 434 PLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLA 493
P+ + L +KS+ + + F PE A++ A LK + ALD N LT LG+ ++
Sbjct: 764 PVDGVILLMKSMNIPKVENFPFPT--PPEPSAIREAERCLKALEALDSNGGLTPLGKAMS 821
Query: 494 MLPMEPKLGKMLI 506
PM P+ +ML+
Sbjct: 822 HYPMSPRHSRMLL 834
Score = 78 (32.5 bits), Expect = 3.8e-54, Sum P(5) = 3.8e-54
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 535 DKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLR 594
D+K+ +AA+ +FS+ SD L + A ++ +E G+ +C N L +M + L+
Sbjct: 898 DRKEKIKAARDRFSNPSSDALTVAYALHSFEVSENGMG---FCEANGLHLKTMDEMSKLK 954
Query: 595 KEFLSLL 601
+ L L+
Sbjct: 955 DQLLRLV 961
Score = 69 (29.3 bits), Expect = 3.8e-54, Sum P(5) = 3.8e-54
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 158 LRLVLMSATLDAELFSS---YFGGAT-VINIPGFTYPVRTHFLE--DILDMTG 204
L+L+LMSATL E F S F +I +P YPV HF + +I+D G
Sbjct: 416 LKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIG 468
Score = 50 (22.7 bits), Expect = 3.8e-54, Sum P(5) = 3.8e-54
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 283 KERP-GAVLVFMTGWDDINSLNDKLQ 307
K+ P G +LVF+TG +++ L +KL+
Sbjct: 479 KKLPQGGILVFVTGQREVDYLCEKLR 504
Score = 45 (20.9 bits), Expect = 4.6e-25, Sum P(4) = 4.6e-25
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 229 PRKRKSQIASAVEDTLKAANFNEYSSQTRE 258
PRK+K++ ++ ++D L + N N S ++R+
Sbjct: 16 PRKKKNKGSNKMQDKLNSNN-NTGSKKSRK 44
Score = 38 (18.4 bits), Expect = 5.0e-50, Sum P(5) = 5.0e-50
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 489 GQYLAMLPMEPKLGKMLILGAIFNCLEP 516
G +L + KL K +L +FNC +P
Sbjct: 941 GLHLKTMDEMSKL-KDQLLRLVFNCCKP 967
Score = 37 (18.1 bits), Expect = 6.3e-50, Sum P(5) = 6.3e-50
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 502 GKMLILGAIFNCLEPVLTIVAG 523
G L+ G + CL+ ++AG
Sbjct: 1139 GCALLQGEVLTCLKSFRALLAG 1160
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 332 (121.9 bits), Expect = 8.6e-54, Sum P(4) = 8.6e-54
Identities = 78/229 (34%), Positives = 117/229 (51%)
Query: 315 PTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKET 374
P VL L + +A +Q +F P G R V+ATN+AETS+TI + +V+DCGK K+
Sbjct: 587 PLHVLPL--YSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKR 644
Query: 375 SYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTP 434
YD + S +W+S S +PG CYRLY V+ F ++ PEI R P
Sbjct: 645 YYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRP 704
Query: 435 LQSLCLQIKSLRLGTIAGF-------LSRALQSPELLAVQNAIE---YLKIIGALDHNE- 483
++ L LQ+K+L + + F + L + ELL A++ + + L N
Sbjct: 705 VEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRL 764
Query: 484 --ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPF 530
+T LG+ +A P+ P+ KML L CL +TIVA ++VR+ F
Sbjct: 765 SCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF 813
Score = 305 (112.4 bits), Expect = 8.6e-54, Sum P(4) = 8.6e-54
Identities = 75/204 (36%), Positives = 120/204 (58%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M E R LP E+ ++ A++++ +VI+ GETG GKTTQVPQF+ E+ +S ++ +
Sbjct: 245 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSS-EDSIIGV 303
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESV-GYKVRLEGMKGRDTRLLFCTTGILLRRLLV 119
T+PRR++A+++S+RVA E L + V Y++R EG +TR+ F T G+LL+ +
Sbjct: 304 --TEPRRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQK 359
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE----LRLVLMSATLDAELFSS- 174
D L VI+DE HER + D L+ +L +++ R + L+L++MSATL E F+
Sbjct: 360 DFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQN 419
Query: 175 ---YFGGATVINIPGFTYPVRTHF 195
+ VI + +PV HF
Sbjct: 420 PRLFAKPPPVIKVESRQFPVTVHF 443
Score = 57 (25.1 bits), Expect = 8.6e-54, Sum P(4) = 8.6e-54
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 569 RGLAGYEYCWKNFLSAPS--MKVIDSLRKEFLSLLKD--TGLVDCDTSICNAWGRDERFI 624
R LA Y C LS+P +K L+ SLL+ DC ++ AW ++ +++
Sbjct: 1075 RKLASYRSC---LLSSPGTMLKTWARLQPRTESLLRALVAEKADCHEALLAAWKKNPKYL 1131
Query: 625 RAVIC 629
A C
Sbjct: 1132 LAEYC 1136
Score = 48 (22.0 bits), Expect = 8.6e-54, Sum P(4) = 8.6e-54
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 278 CY--ICEKER--P-GAVLVFMTGWDDINSLNDKLQ 307
C+ +C+ R P G +LVF+TG ++++L +L+
Sbjct: 456 CFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLR 490
Score = 39 (18.8 bits), Expect = 2.2e-23, Sum P(4) = 2.2e-23
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 423 AEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELL 464
AE + ++ P +S ++ + + L+R +QS E+L
Sbjct: 906 AELFVDPKMQPPTESQVTYLRQIVTAGLGDHLARRVQSEEML 947
Score = 37 (18.1 bits), Expect = 1.0e-51, Sum P(4) = 1.0e-51
Identities = 17/63 (26%), Positives = 27/63 (42%)
Query: 796 AQPAFISRTESGPGGDNSKSQLQTLLTRAGYAAPSYRTKQL--KNG-QFRSTVEFNGMEI 852
A+ A + RT +G G L LL G + T Q NG ++++ +E +
Sbjct: 834 ARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIR--RL 891
Query: 853 MGQ 855
GQ
Sbjct: 892 RGQ 894
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 323 (118.8 bits), Expect = 9.5e-54, Sum P(3) = 9.5e-54
Identities = 79/201 (39%), Positives = 117/201 (58%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R LP E+ ++ AI++N +V+I GETG GKTTQVPQF+ E+ TS G + I
Sbjct: 237 EARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNGII-GI-- 293
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
T+PRR++A+S+S+RVA E V Y++R EG +T++ F T G+LL+ + D
Sbjct: 294 TEPRRVAAVSMSQRVAKEMNLS-HRVVSYQIRYEGNTTDETQIKFMTDGVLLKEVQKDFL 352
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE----LRLVLMSATLDAELFSS---Y 175
L +I+DE HER M D L+ +L ++ R + L+L++MSATL E F+
Sbjct: 353 LSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSATLRVEDFTENTRL 412
Query: 176 FGGAT-VINIPGFTYPVRTHF 195
F G V+ + +PV HF
Sbjct: 413 FAGTPPVLQVDARQFPVTVHF 433
Score = 323 (118.8 bits), Expect = 9.5e-54, Sum P(3) = 9.5e-54
Identities = 74/224 (33%), Positives = 117/224 (52%)
Query: 320 LLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDAL 379
+L + +A +Q +F P G R V+ATN+AETS+TI + +V+DCGK K+ YD +
Sbjct: 579 VLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYDKI 638
Query: 380 NNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLC 439
S +WIS S +PG CYRLY V+ F ++ PEI + P++ L
Sbjct: 639 TGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFMDFEKFSAPEITKRPVEDLI 698
Query: 440 LQIKSLRLGTIAGFL------SRALQSPE-LLAVQNAIEYLKIIGALDHNEE------LT 486
LQ+K+L + + F + AL + E LL A++ + G L + ++
Sbjct: 699 LQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMTGRLKEQQAAKLSCPIS 758
Query: 487 VLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPF 530
LG+ +A P+ P+ KML L +CL +TIV+ ++VR+ F
Sbjct: 759 PLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTVRELF 802
Score = 51 (23.0 bits), Expect = 9.5e-54, Sum P(3) = 9.5e-54
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 278 CY--ICEKER--P-GAVLVFMTGWDDINSLNDKLQ 307
C+ +C+ R P G +LVF+TG +++SL +L+
Sbjct: 446 CFRKVCKIHRMLPSGGILVFLTGQAEVHSLCRRLR 480
Score = 42 (19.8 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 19/80 (23%), Positives = 35/80 (43%)
Query: 12 KEKNRLLTAISQNQ-------VVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
K++ LL+ +S+ Q ++ + + G G P+ +L+ T+V + SI
Sbjct: 92 KQRAELLSKLSEVQASQAEMKLLYTTSKLGIGGRMYQPKRVLQEPGTAVPEKIRSISGAN 151
Query: 65 PRRISAMSVSERVASERGEK 84
RR S+ S E G +
Sbjct: 152 KRRHSSDSEPEPEGESSGSE 171
Score = 41 (19.5 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 8/34 (23%), Positives = 19/34 (55%)
Query: 431 LRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELL 464
++ P ++ ++ + L + L+R +Q+ ELL
Sbjct: 903 MKPPTEAQATYLRQIVLAGLGDHLARRVQAEELL 936
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 329 (120.9 bits), Expect = 6.0e-53, Sum P(4) = 6.0e-53
Identities = 80/231 (34%), Positives = 116/231 (50%)
Query: 315 PTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKET 374
P VL L + +A +Q +F P G R V+ATN+AETS+TI + +V+DCGK K+
Sbjct: 581 PLHVLPL--YSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKR 638
Query: 375 SYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTP 434
YD + S +W+S S +PG CYRLY V+ F ++ PEI R P
Sbjct: 639 HYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFSDFEQFPPPEITRRP 698
Query: 435 LQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEE---------- 484
++ L LQ+K+L + + F S E L A E L +GAL ++
Sbjct: 699 VEDLILQMKALNIEKVINFPFPTPPSVEALIA--AEELLIALGALQAPQKTESVKQLQRS 756
Query: 485 -----LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPF 530
+T LG+ +A P+ P+ KML L CL +TIVA ++VR+ F
Sbjct: 757 WLGCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTVRELF 807
Score = 302 (111.4 bits), Expect = 6.0e-53, Sum P(4) = 6.0e-53
Identities = 76/204 (37%), Positives = 120/204 (58%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M E R LP E+ ++ A++++ +VI+ GETG GKTTQVPQF+ E+ +S ++ I
Sbjct: 239 MQEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSS-DNSIIGI 297
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESV-GYKVRLEGMKGRDTRLLFCTTGILLRRLLV 119
T+PRR++A+++S+RVA E L + V Y++R EG +TR+ F T G+LL+ +
Sbjct: 298 --TEPRRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQK 353
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE----LRLVLMSATLDAELFSS- 174
D L V++DE HER + D L+ +L ++S R + L+L++MSATL E F+
Sbjct: 354 DFLLLRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLLIMSATLRVEDFTQN 413
Query: 175 ---YFGGATVINIPGFTYPVRTHF 195
+ VI + +PV HF
Sbjct: 414 QRLFPQPPPVIKVESRQFPVTVHF 437
Score = 55 (24.4 bits), Expect = 6.0e-53, Sum P(4) = 6.0e-53
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 571 LAGYEYCWKNFLSAPS--MKVIDSLRKEFLSLLKD--TGLVDCDTSICNAWGRDERFIRA 626
LA Y C LS+PS +K L+ SLLK +C ++ AW ++ +++ A
Sbjct: 1071 LASYRGC---LLSSPSTMLKTWARLQPRTESLLKALVAEQANCREALLAAWTKNPKYLLA 1127
Query: 627 VICYGL 632
C L
Sbjct: 1128 EYCQWL 1133
Score = 48 (22.0 bits), Expect = 6.0e-53, Sum P(4) = 6.0e-53
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 278 CY--ICEKER--P-GAVLVFMTGWDDINSLNDKLQ 307
C+ +C+ R P G +LVF+TG ++++L +L+
Sbjct: 450 CFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLR 484
Score = 38 (18.4 bits), Expect = 6.5e-52, Sum P(4) = 6.5e-52
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 206 RLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
R P + + E+M K K R +K+Q A
Sbjct: 492 RRPPEKEDQEDSVEEMRKFKKSRTRVKKAQAA 523
>UNIPROTKB|G4NI12 [details] [associations]
symbol:MGG_17793 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0043581
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 RefSeq:XP_003720239.1 EnsemblFungi:MGG_17793T0
GeneID:12987242 KEGG:mgr:MGG_17793 Uniprot:G4NI12
Length = 1430
Score = 578 (208.5 bits), Expect = 7.5e-53, P = 7.5e-53
Identities = 197/699 (28%), Positives = 322/699 (46%)
Query: 74 SERVASER-GEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLL--VDRNLKGVTHVI 130
SER ER GE +G + + RL +G F T GILL++L V L +H++
Sbjct: 656 SER--GERLGESVGFRIRFDARLANRQGGTVS--FVTLGILLKQLQDGVQETLDMYSHIV 711
Query: 131 VDEVHERGMNEDFLLIVLKDLLSRR----PEL-RLVLMSATL-DAELFSSYF------GG 178
+DEVHER + D LL+VLK ++ R L +++LMSA++ + E Y G
Sbjct: 712 IDEVHERSLELDLLLVVLKKAIAERLAKGQSLPKIILMSASISNQEQLQEYLADSLHDGK 771
Query: 179 AT---------VINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQE-KMWKMSKQA 228
A +++IPG T+PV + +L+ +L M D YG++ +W K
Sbjct: 772 ARRLPAHQACPILSIPGRTFPVSSIYLDRLLPMIR---------DKYGEQLDLWLEDK-- 820
Query: 229 PRKRKSQIASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGA 288
P K SA L+ +E+ E+L+ + + +L+ + +I PG
Sbjct: 821 PFK------SAAIQYLETETSSEWDISD-ETLAERHAAYVPIDLVAATIAHIASSASPGD 873
Query: 289 VLVFMTGWDDINSLNDKLQANR-ILG---------DPTRVLLLTCHGSMASSEQRLIFDE 338
+LVF+ G +I S+ND L+ + LG D ++ + H +++++EQ IF +
Sbjct: 874 ILVFLPGIKEIRSVNDVLRDRQGSLGIDFKDINFNDTSKFRIHFLHSAVSAAEQNKIFQK 933
Query: 339 PESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXX 398
G R+I+LA+NIAETS+TI DVV V+D GK ++ YD + + W +
Sbjct: 934 VPLGCRRIILASNIAETSVTIPDVVHVVDVGKTRDRKYDRSTRITGMYTGWQTKSKAMQR 993
Query: 399 XXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRL-GTIAGFLSRA 457
Q G Y LY + + LPE+L+ L + CL +K ++A FL+ A
Sbjct: 994 QGRAGRTQEGHYYGLYSEQRRQSMKDDALPEMLKLDLTNTCLSVKGFGFRDSVADFLAAA 1053
Query: 458 LQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPV 517
+ P VQ+A+ LK + AL NE +T LG L +P+ P LGKM++LG F C+ P+
Sbjct: 1054 ISPPPPSVVQDAVNSLKAMDALAENEGITSLGHLLLRIPLHPLLGKMILLGVFFRCVGPM 1113
Query: 518 LTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAER--GLAGYE 575
+ + A F P A+ A QF SDHL+ ++AF + E+ +
Sbjct: 1114 IVLCALHGGGSLFEVPPGSPSAAKRAHQQFRVADSDHLSQMKAFNHLRQLEQISHREAVD 1173
Query: 576 YCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSI-----------CNAWGRDERFI 624
+ L+ + + +L + GLV + N +E+ +
Sbjct: 1174 FARSEHLNFAKYEEAKLTAAQIEQVLINHGLVPPRDELEHRFSSPGGVELNVNSGNEQLL 1233
Query: 625 RAVICYGLYPGIS-SIVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKV 683
+A++ GLYP ++ + ++ SLK G S V + + P + +E
Sbjct: 1234 KALLVKGLYPNVAVKVARSPTRMSLKAAAGG-----SGHVLLGHASVVQP-ITNHELFPK 1287
Query: 684 NSVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGGYL 722
NS+F+ D + L+F ++S E L + GG L
Sbjct: 1288 NSLFVYSELVRQDYINLMFLTNVSHLESPLVLALFGGSL 1326
Score = 381 (139.2 bits), Expect = 9.9e-34, Sum P(2) = 9.9e-34
Identities = 113/321 (35%), Positives = 175/321 (54%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R +LP K + +LL + + I+ G TG GK+TQVPQ IL+ I RGA I+C Q
Sbjct: 582 RASLPMNKHRKQLLNLVEGSHFCIVIGATGSGKSTQVPQIILDDAIKQGRGADTRILCLQ 641
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEG-MKGRDTRLL-FCTTGILLRRLL--VD 120
PRR +AM V++RVASERGE+LGESVG+++R + + R + F T GILL++L V
Sbjct: 642 PRRAAAMWVAQRVASERGERLGESVGFRIRFDARLANRQGGTVSFVTLGILLKQLQDGVQ 701
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRR----PEL-RLVLMSATL-DAELFSS 174
L +H+++DEVHER + D LL+VLK ++ R L +++LMSA++ + E
Sbjct: 702 ETLDMYSHIVIDEVHERSLELDLLLVVLKKAIAERLAKGQSLPKIILMSASISNQEQLQE 761
Query: 175 YFGGATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKS 234
Y A ++ G + H IL + G R P + I Y +++ M + K
Sbjct: 762 YL--ADSLH-DGKARRLPAHQACPILSIPG-RTFPVSSI--Y-LDRLLPMIRD---KYGE 811
Query: 235 QIASAVEDT-LKAANFN----EYSSQ---TRESLSCWNPDCIGFNLIEYVLCYICEKERP 286
Q+ +ED K+A E SS+ + E+L+ + + +L+ + +I P
Sbjct: 812 QLDLWLEDKPFKSAAIQYLETETSSEWDISDETLAERHAAYVPIDLVAATIAHIASSASP 871
Query: 287 GAVLVFMTGWDDINSLNDKLQ 307
G +LVF+ G +I S+ND L+
Sbjct: 872 GDILVFLPGIKEIRSVNDVLR 892
Score = 77 (32.2 bits), Expect = 9.9e-34, Sum P(2) = 9.9e-34
Identities = 29/102 (28%), Positives = 54/102 (52%)
Query: 620 DERFIRAVICYGLYPGIS-SIVQNGKSSSLKTME--DGQVFL-YSNSVNARESEIPYP-- 673
+E+ ++A++ GLYP ++ + ++ SLK G V L +++ V + +P
Sbjct: 1229 NEQLLKALLVKGLYPNVAVKVARSPTRMSLKAAAGGSGHVLLGHASVVQPITNHELFPKN 1288
Query: 674 -WLVFNEKMK---VNSVFLKD-STAVSDSVLLLFGGSISQGE 710
V++E ++ +N +FL + S S VL LFGGS+ + E
Sbjct: 1289 SLFVYSELVRQDYINLMFLTNVSHLESPLVLALFGGSLLRPE 1330
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 355 (130.0 bits), Expect = 1.7e-52, Sum P(3) = 1.7e-52
Identities = 79/191 (41%), Positives = 117/191 (61%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP + +L+ ++ + +I+ GETG GK+TQVPQ + + I + G SI TQ
Sbjct: 158 RPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIAN-SG---SIAVTQ 213
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++A+S++ RVA+E G +G VGY VR E T++ + T GI+LR+ LV L
Sbjct: 214 PRRVAAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLD 273
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE----LRLVLMSATLDAELFSSYFGGAT 180
+ VI+DE HER ++ D L+ +L+ +R E LRL++MSATL AE F SYF A
Sbjct: 274 KYSCVIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAK 333
Query: 181 VINIPGFTYPV 191
V+ + G T+P+
Sbjct: 334 VVLVAGRTFPI 344
Score = 284 (105.0 bits), Expect = 1.7e-52, Sum P(3) = 1.7e-52
Identities = 84/297 (28%), Positives = 140/297 (47%)
Query: 276 VLC--YICEKERPGA-VLVFMTGWDDINSLNDKL-QANRILGDPTRVLL-LTCHGSMASS 330
V+C Y+ E G +LVF+TG ++I ++ +L + N L VL+ + + ++
Sbjct: 367 VICVKYVHLTEPKGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPE 426
Query: 331 EQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWI 390
+Q+ F + G RK++++TNIAETS+TI + VID GK K ++A N L +
Sbjct: 427 KQKEAFRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNV 486
Query: 391 STVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTI 450
S PG+CYRLY R + F +PEILR L + L++ ++LG
Sbjct: 487 SKAQAKQRAGRAGRDAPGKCYRLYSREDFHKFEAENMPEILRCNLSATFLEL--MKLGMK 544
Query: 451 AGFLSRALQSPELLAVQNAIEYLKIIGAL-----DHNE-ELTVLGQYLAMLPMEPKLGKM 504
+ + PE + A+ L +GA+ D ++ LT +G M P+ P ++
Sbjct: 545 NPHRLKLIDPPETDNINAALLELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARI 604
Query: 505 LILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEA--AKSQFSHDYSDHLALVR 559
L C+ + IVA + F D K A+ + +F DH+ L++
Sbjct: 605 LFQAQKEGCIMEAIKIVAAMQTDALFSGAGDSKSDADVDRIRRRFETREGDHITLLK 661
Score = 72 (30.4 bits), Expect = 1.9e-30, Sum P(3) = 1.9e-30
Identities = 49/236 (20%), Positives = 90/236 (38%)
Query: 485 LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEA-- 542
LT +G M P+ P ++L C+ + IVA + F D K A+
Sbjct: 585 LTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAAMQTDALFSGAGDSKSDADVDR 644
Query: 543 AKSQFSHDYSDHLALVRA-------FEGWK-----DAERGLAG------Y-----EYCWK 579
+ +F DH+ L++ F+ DA G A Y ++C
Sbjct: 645 IRRRFETREGDHITLLKLVLVTNQFFDQLNKKTESDARYGKANKSLEREYNQTIRKFCND 704
Query: 580 NFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDT-SICNAWGRDERFIRAVICYGLYPGISS 638
N ++ +K + ++ LK + T S C G D +R + G++ ++S
Sbjct: 705 NMINEQHLKTASMIEEQ----LKQIAIEQKVTFSTC---GADFMKMRKALALGMF--LNS 755
Query: 639 IVQNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAV 694
+ + + M + + L + + P ++VF+E MK N +F T +
Sbjct: 756 CEYDRQEDRYRLMINPAITLKIHPSSCLSRSKP-AYIVFSELMKTNDLFALQVTLI 810
Score = 37 (18.1 bits), Expect = 1.7e-52, Sum P(3) = 1.7e-52
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 2 LEFRRNLPAYKEKNR 16
+E + PA+K+K R
Sbjct: 1 MEIKSKFPAWKKKKR 15
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 332 (121.9 bits), Expect = 2.9e-52, Sum P(4) = 2.9e-52
Identities = 78/229 (34%), Positives = 117/229 (51%)
Query: 315 PTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKET 374
P VL L + +A +Q +F P G R V+ATN+AETS+TI + +V+DCGK K+
Sbjct: 374 PLHVLPL--YSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKR 431
Query: 375 SYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTP 434
YD + S +W+S S +PG CYRLY V+ F ++ PEI R P
Sbjct: 432 YYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRP 491
Query: 435 LQSLCLQIKSLRLGTIAGF-------LSRALQSPELLAVQNAIE---YLKIIGALDHNE- 483
++ L LQ+K+L + + F + L + ELL A++ + + L N
Sbjct: 492 VEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRL 551
Query: 484 --ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPF 530
+T LG+ +A P+ P+ KML L CL +TIVA ++VR+ F
Sbjct: 552 SCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF 600
Score = 305 (112.4 bits), Expect = 2.9e-52, Sum P(4) = 2.9e-52
Identities = 75/204 (36%), Positives = 120/204 (58%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M E R LP E+ ++ A++++ +VI+ GETG GKTTQVPQF+ E+ +S ++ +
Sbjct: 32 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSS-EDSIIGV 90
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESV-GYKVRLEGMKGRDTRLLFCTTGILLRRLLV 119
T+PRR++A+++S+RVA E L + V Y++R EG +TR+ F T G+LL+ +
Sbjct: 91 --TEPRRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQK 146
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE----LRLVLMSATLDAELFSS- 174
D L VI+DE HER + D L+ +L +++ R + L+L++MSATL E F+
Sbjct: 147 DFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQN 206
Query: 175 ---YFGGATVINIPGFTYPVRTHF 195
+ VI + +PV HF
Sbjct: 207 PRLFAKPPPVIKVESRQFPVTVHF 230
Score = 48 (22.0 bits), Expect = 2.9e-52, Sum P(4) = 2.9e-52
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 278 CY--ICEKER--P-GAVLVFMTGWDDINSLNDKLQ 307
C+ +C+ R P G +LVF+TG ++++L +L+
Sbjct: 243 CFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLR 277
Score = 39 (18.8 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 423 AEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELL 464
AE + ++ P +S ++ + + L+R +QS E+L
Sbjct: 693 AELFVDPKMQPPTESQVTYLRQIVTAGLGDHLARRVQSEEML 734
Score = 37 (18.1 bits), Expect = 2.9e-52, Sum P(4) = 2.9e-52
Identities = 17/63 (26%), Positives = 27/63 (42%)
Query: 796 AQPAFISRTESGPGGDNSKSQLQTLLTRAGYAAPSYRTKQL--KNG-QFRSTVEFNGMEI 852
A+ A + RT +G G L LL G + T Q NG ++++ +E +
Sbjct: 621 ARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIR--RL 678
Query: 853 MGQ 855
GQ
Sbjct: 679 RGQ 681
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 329 (120.9 bits), Expect = 6.9e-52, Sum P(3) = 6.9e-52
Identities = 77/229 (33%), Positives = 117/229 (51%)
Query: 315 PTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKET 374
P VL L + +A +Q +F P G R V+ATN+AETS+TI + +V+DCGK K+
Sbjct: 585 PLHVLPL--YSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKR 642
Query: 375 SYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTP 434
YD + S +W+S S +PG CYRLY V+ F +Y PEI R P
Sbjct: 643 HYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEKYPPPEITRRP 702
Query: 435 LQSLCLQIKSLRLGTIAGF-------LSRALQSPELLAVQNAIEY---LKIIGALDHNE- 483
++ L LQ+K+L + + F + + + ELL A++ + + L +
Sbjct: 703 VEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKTERVKQLQRSRL 762
Query: 484 --ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPF 530
+T LG+ +A P+ P+ KML L CL +TIVA ++VR+ F
Sbjct: 763 SCPITELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTVRELF 811
Score = 302 (111.4 bits), Expect = 6.9e-52, Sum P(3) = 6.9e-52
Identities = 76/203 (37%), Positives = 117/203 (57%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M E R LP E+ ++ A++++ +VII GETG GKTTQVPQF+ E+ +S +V +
Sbjct: 243 MQEERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSS-DNSVIGV 301
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
T+PRR++A+++S+RVA E V Y++R EG +TR+ F T G+LL+ + D
Sbjct: 302 --TEPRRVAAVAMSQRVAKEMNLS-PRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKD 358
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE----LRLVLMSATLDAELFSS-- 174
L VI+DE HER + D L+ +L ++ R + L+L++MSATL E F+
Sbjct: 359 FLLLKYKVVIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIMSATLRVEDFTQNQ 418
Query: 175 --YFGGATVINIPGFTYPVRTHF 195
+ VI + +PV HF
Sbjct: 419 RLFTQPPPVIKVESRQFPVTVHF 441
Score = 48 (22.0 bits), Expect = 6.9e-52, Sum P(3) = 6.9e-52
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 278 CY--ICEKER--P-GAVLVFMTGWDDINSLNDKLQ 307
C+ +C+ R P G +LVF+TG ++++L +L+
Sbjct: 454 CFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLR 488
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 323 (118.8 bits), Expect = 1.2e-51, Sum P(4) = 1.2e-51
Identities = 77/240 (32%), Positives = 121/240 (50%)
Query: 315 PTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKET 374
P VL L + +A +Q +F P G R V+ATN+AETS+TI + +V+DCGK K+
Sbjct: 580 PLHVLPL--YSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKR 637
Query: 375 SYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTP 434
YD + S +W+S S +PG CYRLY V+ F ++ PEI R P
Sbjct: 638 YYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRP 697
Query: 435 LQSLCLQIKSLRLGTIAGF-------LSRALQSPELLAVQNAI------EYLKIIGALDH 481
++ L LQ+K+L + + F + + + ELL A+ E +K +
Sbjct: 698 VEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKQERMKKLQMSQL 757
Query: 482 NEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAE 541
+ +T LG+ ++ P+ P+ KML L CL + IVA ++VR+ F +D+ +E
Sbjct: 758 SCPITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTVRELF-EELDRPAASE 816
Score = 306 (112.8 bits), Expect = 1.2e-51, Sum P(4) = 1.2e-51
Identities = 75/203 (36%), Positives = 118/203 (58%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M E R LP E+ ++ A++++ +VI+ GETG GKTTQVPQF+ E+ +S ++ +
Sbjct: 241 MQEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSS-EDSIIGV 299
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
T+PRR++A+++S+RVA E V Y++R EG +TR+ F T G+LL+ + D
Sbjct: 300 --TEPRRVAAVAMSQRVAKEMNLS-HRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKD 356
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE----LRLVLMSATLDAELFSS-- 174
L VI+DE HER + D LL +L +++ R + L+L++MSATL E F+
Sbjct: 357 FLLLKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQNQ 416
Query: 175 --YFGGATVINIPGFTYPVRTHF 195
+ VI + +PV HF
Sbjct: 417 RLFTTPPPVIKVESRQFPVTVHF 439
Score = 48 (22.0 bits), Expect = 1.2e-51, Sum P(4) = 1.2e-51
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 278 CY--ICEKER--P-GAVLVFMTGWDDINSLNDKLQ 307
C+ +C+ R P G +LVF+TG ++++L +L+
Sbjct: 452 CFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLR 486
Score = 45 (20.9 bits), Expect = 1.2e-51, Sum P(4) = 1.2e-51
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 569 RGLAGYEYCWKNFLSAPS--MKVIDSLRKEFLSLLKDTGLVDCDT--SICNAWGRDERFI 624
R LA ++ C LS+P+ +K L+ +LL+ D+ S+ AW ++ +++
Sbjct: 1068 RKLASFKSC---LLSSPNTMLKTWARLQPRTETLLRALVAQKADSRDSLLAAWKKNPKYL 1124
Query: 625 RAVIC 629
A C
Sbjct: 1125 LAEYC 1129
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 327 (120.2 bits), Expect = 2.3e-51, Sum P(4) = 2.3e-51
Identities = 79/231 (34%), Positives = 122/231 (52%)
Query: 314 DPTRVL-LLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAK 372
DP+ L +L + +A +Q +F P +G R V+ATN+AETS+TI + +V+DCG+ K
Sbjct: 575 DPSIPLYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVK 634
Query: 373 ETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILR 432
+ YD + S +WIS S +PG CYRLY V+ F+ + EI R
Sbjct: 635 KRFYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFGDFSLFSEAEITR 694
Query: 433 TPLQSLCLQIKSLRLGTIAGF------LSRAL-QSPELLAVQNAIEYLKIIGALDHNEE- 484
P++ L LQ+K L + + F S AL + ELL A+E G L E+
Sbjct: 695 RPVEDLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRLSEMEKA 754
Query: 485 -----LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPF 530
++ LG+ +A P+ P+ KML LG C++ ++TIV+ ++VR+ F
Sbjct: 755 RLSCPISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTVREIF 805
Score = 291 (107.5 bits), Expect = 2.3e-51, Sum P(4) = 2.3e-51
Identities = 70/201 (34%), Positives = 114/201 (56%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIIC 62
E R LP E+ ++ A+ ++ V++ GETG GKTTQVPQF+ E+ S G + +
Sbjct: 247 EARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFAS-SGGIIGV-- 303
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
T+PRR++A+S+S RVA+E G V Y++R EG +T++ T G+LL+ + D
Sbjct: 304 TEPRRVAAISMSHRVATEMNLSSGV-VSYQIRYEGNVTENTKIKVMTDGVLLKEIQRDFL 362
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE----LRLVLMSATLDAELFSS---- 174
L+ + +I+DE HER + D L+ +L ++ R + ++L++MSATL E F+
Sbjct: 363 LQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRVEDFTENKRL 422
Query: 175 YFGGATVINIPGFTYPVRTHF 195
+ VI + + V HF
Sbjct: 423 FSSPPPVIKVEARQFAVTVHF 443
Score = 56 (24.8 bits), Expect = 2.3e-51, Sum P(4) = 2.3e-51
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 277 LCYICEKERPGAVLVFMTGWDDINSLNDKLQ 307
+C I PG +LVF+TG +++S+ +L+
Sbjct: 460 ICKIHRMLPPGGILVFLTGQAEVHSVCRRLR 490
Score = 45 (20.9 bits), Expect = 2.3e-51, Sum P(4) = 2.3e-51
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 582 LSAPS--MKVIDSL--RKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVIC 629
LS+PS +K L R E L + D TS+ AW ++E+++ + C
Sbjct: 1077 LSSPSTMLKTWAKLQPRTEVLLTALVSEKADNRTSLEAAWRKNEKYLLSAYC 1128
Score = 41 (19.5 bits), Expect = 1.2e-21, Sum P(4) = 1.2e-21
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 433 TPLQSLCLQIKSLRLGTIAGFLSRALQSPELL 464
T Q LCL + + L + ++R +Q+ ELL
Sbjct: 910 TEAQVLCL--RQIVLAGLGDHIARRVQAEELL 939
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 561 (202.5 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 154/522 (29%), Positives = 260/522 (49%)
Query: 201 DMTGYRLTPYNQIDD--YGQEKMWKMSKQAPRKRKSQIASAVEDTLKAANFNEYSSQTR- 257
D++GY L ++ + + ++ + K A RKR TL + F+EY +
Sbjct: 650 DLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPI 709
Query: 258 ----------ESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKL- 306
E L P+ + I E PG VLVF+TG ++I++ + L
Sbjct: 710 FTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLY 769
Query: 307 QANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFV 365
+ + +G D +++L +G++ S Q IFD +G RK+V+ATNIAETS+TI+ + +V
Sbjct: 770 ERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYV 829
Query: 366 IDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYP-RCVYDAFAE 424
+D G K+ Y+ + L+ + IS + PG+CYRLY R D
Sbjct: 830 VDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLP 889
Query: 425 YQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEE 484
+PEI RT L S LQ+K++ + + F + +P L ++ A+ L + ALD +
Sbjct: 890 TPVPEIQRTNLASTLLQLKAMGINNLIDF--DFMDAPPLDSMITALNTLHTLSALDGDGL 947
Query: 485 LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK 544
LT LG+ +A P+EP L K+LI+ C E VLTIVA L+V++ F P +K+D A+ K
Sbjct: 948 LTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQKK 1007
Query: 545 SQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDT 604
++F DHL L+ + WK+ +C++NF+ SMK +RK+ L
Sbjct: 1008 AKFHQPEGDHLTLLAVYNSWKNHH---FSQPWCFENFIQVRSMKRAQDIRKQLL------ 1058
Query: 605 GLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQ-VFLYSNSV 663
G++D + + GRD ++ IC G + + + +T+ DGQ V+++ +S
Sbjct: 1059 GIMDRHKLLMVSCGRDVSRVQKAICSGFF---RNAAKRDPQEGYRTLTDGQNVYIHPSSA 1115
Query: 664 NARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGS 705
++ P W+V++E + ++++ TA+ L+ F S
Sbjct: 1116 CFQQQ--P-EWVVYHELVMTTKEYMREVTAIDPKWLVEFAPS 1154
Score = 425 (154.7 bits), Expect = 3.8e-36, P = 3.8e-36
Identities = 88/191 (46%), Positives = 127/191 (66%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M+E R +LP + K L+ A+ NQ++++ GETG GKTTQ+ Q+ +E+ + RG I
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGR-RG---KI 588
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RVA E G KLG VGY +R E +DT + + T G+LLR L+D
Sbjct: 589 GCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLID 648
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L G + +++DE HER ++ D L +LK +RPEL+L++ SATLD+ FS YF A
Sbjct: 649 PDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAP 708
Query: 181 VINIPGFTYPV 191
+ IPG T+PV
Sbjct: 709 IFTIPGRTFPV 719
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 561 (202.5 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 154/522 (29%), Positives = 260/522 (49%)
Query: 201 DMTGYRLTPYNQIDD--YGQEKMWKMSKQAPRKRKSQIASAVEDTLKAANFNEYSSQTR- 257
D++GY L ++ + + ++ + K A RKR TL + F+EY +
Sbjct: 650 DLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPI 709
Query: 258 ----------ESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKL- 306
E L P+ + I E PG VLVF+TG ++I++ + L
Sbjct: 710 FTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLY 769
Query: 307 QANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFV 365
+ + +G D +++L +G++ S Q IFD +G RK+V+ATNIAETS+TI+ + +V
Sbjct: 770 ERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYV 829
Query: 366 IDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYP-RCVYDAFAE 424
+D G K+ Y+ + L+ + IS + PG+CYRLY R D
Sbjct: 830 VDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLP 889
Query: 425 YQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEE 484
+PEI RT L S LQ+K++ + + F + +P L ++ A+ L + ALD +
Sbjct: 890 TPVPEIQRTNLASTLLQLKAMGINNLIDF--DFMDAPPLDSMITALNTLHTLSALDGDGL 947
Query: 485 LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK 544
LT LG+ +A P+EP L K+LI+ C E VLTIVA L+V++ F P +K+D A+ K
Sbjct: 948 LTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQKK 1007
Query: 545 SQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDT 604
++F DHL L+ + WK+ +C++NF+ SMK +RK+ L
Sbjct: 1008 AKFHQPEGDHLTLLAVYNSWKNHH---FSQPWCFENFIQVRSMKRAQDIRKQLL------ 1058
Query: 605 GLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQ-VFLYSNSV 663
G++D + + GRD ++ IC G + + + +T+ DGQ V+++ +S
Sbjct: 1059 GIMDRHKLLMVSCGRDVSRVQKAICSGFF---RNAAKRDPQEGYRTLTDGQNVYIHPSSA 1115
Query: 664 NARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGS 705
++ P W+V++E + ++++ TA+ L+ F S
Sbjct: 1116 CFQQQ--P-EWVVYHELVMTTKEYMREVTAIDPKWLVEFAPS 1154
Score = 425 (154.7 bits), Expect = 3.8e-36, P = 3.8e-36
Identities = 88/191 (46%), Positives = 127/191 (66%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M+E R +LP + K L+ A+ NQ++++ GETG GKTTQ+ Q+ +E+ + RG I
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGR-RG---KI 588
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RVA E G KLG VGY +R E +DT + + T G+LLR L+D
Sbjct: 589 GCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLID 648
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L G + +++DE HER ++ D L +LK +RPEL+L++ SATLD+ FS YF A
Sbjct: 649 PDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAP 708
Query: 181 VINIPGFTYPV 191
+ IPG T+PV
Sbjct: 709 IFTIPGRTFPV 719
>UNIPROTKB|F1NWS9 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007140 "male meiosis" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0034587 "piRNA metabolic process" evidence=IEA]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=IEA] [GO:0071547 "piP-body" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR002999
GO:GO:0005524 GO:GO:0005634 GO:GO:0009566 GO:GO:0003676
GO:GO:0004386 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0071547 OMA:INDWFTI
EMBL:AADN02003787 IPI:IPI00574259 Ensembl:ENSGALT00000018863
Uniprot:F1NWS9
Length = 1180
Score = 378 (138.1 bits), Expect = 6.7e-51, Sum P(2) = 6.7e-51
Identities = 106/302 (35%), Positives = 157/302 (51%)
Query: 275 YVLCY-ICEKERPGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQR 333
Y+L I ER G+VLVF+ G+ +I+ ++ L R+ +V L H ++ EQ
Sbjct: 180 YILFRGIFTPER-GSVLVFLPGFCEISYMHSCL--TRMFNKKWQVYPL--HSRVSLEEQN 234
Query: 334 LIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTV 393
+F P G RK++L+TNIAE+S+T+ DV +VID + D N L W S
Sbjct: 235 NVFLNPVPGYRKVILSTNIAESSVTVPDVKYVIDFCLTRTLFCDEETNYQSLRLCWASKT 294
Query: 394 SXXXXXXXXXXVQPGECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAG 452
+ V G CYRL + + D E LPE+L PL + L+IK L +G
Sbjct: 295 NCYQRRGRAGRVSNGYCYRLVHKDFWTDCIPEKSLPEMLICPLGATVLKIKKLDMGEPKA 354
Query: 453 FLSRALQSPELLAVQNAIEYLKIIGAL-------DHNE-ELTVLGQYLAMLPMEPKLGKM 504
L+ AL P + ++ I +LK +GAL D + ELT LG L LP++ LGK+
Sbjct: 355 LLATALSPPNVSDIERTILHLKELGALTACVQAEDQRDGELTFLGNVLVHLPVDLHLGKL 414
Query: 505 LILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFS-HDYSDHLALVRAFEG 563
++LG +F CLE L I A LS+R+ + P + +K FS + SD +A+V AF+
Sbjct: 415 IVLGHVFGCLEECLIIAAALSLRNFIVEPFKQPIDGYRSKLFFSGNSKSDCIAIVNAFKA 474
Query: 564 WK 565
W+
Sbjct: 475 WQ 476
Score = 241 (89.9 bits), Expect = 6.7e-51, Sum P(2) = 6.7e-51
Identities = 54/151 (35%), Positives = 92/151 (60%)
Query: 73 VSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVD 132
++ ++ ER LG VGY+V LE + +TRLL+ TTG+LL++ + ++L TH+ VD
Sbjct: 1 IARWISKERSWTLGGFVGYQVGLENISTAETRLLYMTTGVLLQKAVSAKSLTEFTHIFVD 60
Query: 133 EVHERGMNEDFLLIVLKDLLSRRPE-LRLVLMSATLDAELFSSYFG-----G---ATVIN 183
EVHER + DFLL+V++ LL + ++++LMSAT++ E + YF G A +
Sbjct: 61 EVHERTEDMDFLLLVIRKLLRTNSQSVKIILMSATINCEEIADYFAIPTQNGLNPACIFK 120
Query: 184 IPGFTYPVRTHFLEDILDMTGYRLTPYNQID 214
+ G Y V ++L+D+ + +++ P +ID
Sbjct: 121 VEGKPYAVEEYYLDDLKHVIHFQI-PSQRID 150
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 379 (138.5 bits), Expect = 1.5e-50, Sum P(3) = 1.5e-50
Identities = 98/329 (29%), Positives = 165/329 (50%)
Query: 287 GAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKI 346
G L+F+ G +I+ + + L+ L + +L+L H +++ EQ +FD+ G+RK
Sbjct: 292 GDALIFLNGVAEISMVAEHLKNYAELTNGWIILML--HSTLSVEEQDKVFDQAPVGIRKC 349
Query: 347 VLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQ 406
+L+TN+AETS+TI+ + FVID GK ++ T L W+S S
Sbjct: 350 ILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKLTEFWVSKASANQRKGRAGRTG 409
Query: 407 PGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAV 466
PG CYRLY + ++ ++ + EI R LQ + L++ SL LG ++ P +
Sbjct: 410 PGICYRLYSQEQFEKMDDFTVSEINRVSLQEMALKMISLNLGLDPRTFP-FIEKPSEDVL 468
Query: 467 QNAIEYLKIIGAL--DHNE--ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+E LK L D + LT LG ++ LP+E + KML+ G + + LE +LT+ A
Sbjct: 469 NEGLEVLKFQRVLRSDRGDILTLTALGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTVAA 528
Query: 523 GLSVRDPFLAPMDKK-DLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCW--K 579
GLSV+ PF ++ ++ E ++ + D L+ F W ++ G W +
Sbjct: 529 GLSVQSPFTNRSYRELEIVER-RASLTSPLGDPFTLISIFREWV-LQKAFEGTARRWTME 586
Query: 580 NFLSAPSMKVIDSLRKEFLSLLKDTGLVD 608
N + + I LR ++ +L+D GLV+
Sbjct: 587 NGIDEHRLYEISKLRAQYRQILEDAGLVE 615
Score = 240 (89.5 bits), Expect = 1.5e-50, Sum P(3) = 1.5e-50
Identities = 57/168 (33%), Positives = 97/168 (57%)
Query: 96 EGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRR 155
E K + T+LLF T G+LLR++ D L+ +I+DEVHER + D L+ +L+DL ++R
Sbjct: 154 ETTKSQKTKLLFLTEGLLLRQMEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTKR 213
Query: 156 PELRLVLMSATLDAELFSSYFGGATVINIPGFTYP--VRTHFLEDILDMTGYRLTPYNQI 213
+L+L+LMSAT++ +LF YF GA V+ +PG +P VR H ++ +D + + ++I
Sbjct: 214 DDLKLILMSATINLDLFKGYFEGAPVVQVPGRLFPIDVRWHPIKQFIDQSDKKT---HKI 270
Query: 214 DDYGQEKMWKM-SKQAPRKRKSQ----IASAVEDTLKAANFNEYSSQT 256
D K+ ++ KQ P ++ + E ++ A + Y+ T
Sbjct: 271 DPEPYLKILELIDKQFPSTQRGDALIFLNGVAEISMVAEHLKNYAELT 318
Score = 41 (19.5 bits), Expect = 1.5e-50, Sum P(3) = 1.5e-50
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 624 IRAVICYGLYPGIS 637
+R +I GLYP S
Sbjct: 717 VRVIIAAGLYPNFS 730
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 321 (118.1 bits), Expect = 2.2e-50, Sum P(3) = 2.2e-50
Identities = 75/199 (37%), Positives = 119/199 (59%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP + E+ R++ AI++N V ++ GETG GKTTQ+PQF+ E+ S G + I T+
Sbjct: 233 RAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYAS-EGELIGI--TE 289
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++A+++++RV E + + V Y++R EG + T +LF T G+L++ + D LK
Sbjct: 290 PRRVAAIAMAQRVGVELAKP--DEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQDVMLK 347
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPE----LRLVLMSATLDAELFS--SYFGG 178
+ +++DE HER M D L+ +L ++ R + LRLV+MSATL + F+ F
Sbjct: 348 KYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDDFTHKKLFPL 407
Query: 179 AT--VINIPGFTYPVRTHF 195
T VI + +PV HF
Sbjct: 408 LTPKVIKVDARQFPVSVHF 426
Score = 279 (103.3 bits), Expect = 2.2e-50, Sum P(3) = 2.2e-50
Identities = 78/255 (30%), Positives = 123/255 (48%)
Query: 302 LNDKLQANRILGDPTRVLLLTC---HGSMASSEQRLIFDEPESGVRKIVLATNIAETSIT 358
L+D N I P L C + ++ +QR +FDE +G+R V++TN+AETS+T
Sbjct: 556 LSDGKVENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLT 615
Query: 359 INDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCV 418
I V +VID G K YD++ S IS S + G YRLY V
Sbjct: 616 IPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAV 675
Query: 419 YDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGA 478
Y F ++ PEIL P L L +KS+ + + F + ++L ++A + L +GA
Sbjct: 676 YQDFVKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDEQML--ESAEKRLCRLGA 733
Query: 479 LDHNEE-------LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFL 531
L + + +T LG+ LA+ P+ P K + + N + + +++ LSVR+P L
Sbjct: 734 LSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVREP-L 792
Query: 532 APMD--KKDLAEAAK 544
P+ + D E K
Sbjct: 793 IPVSSLRGDTPEETK 807
Score = 65 (27.9 bits), Expect = 2.2e-50, Sum P(3) = 2.2e-50
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 278 CYICEKERPGAVLVFMTGWDDINSLNDKLQ 307
C I E PGA+LVF+TG ++ L KL+
Sbjct: 443 CRIHETLPPGAILVFVTGQHEVKQLITKLK 472
>UNIPROTKB|C3XYZ4 [details] [associations]
symbol:BRAFLDRAFT_65715 "Putative uncharacterized protein"
species:7739 "Branchiostoma floridae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0009566 "fertilization"
evidence=ISS] [GO:0034587 "piRNA metabolic process" evidence=ISS]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00028 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0005634 GO:GO:0008270 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0007140 Pfam:PF00567 GO:GO:0043046
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GO:GO:0008026 GO:GO:0071547 OMA:INDWFTI EMBL:GG666475
RefSeq:XP_002610548.1 GeneID:7220579 KEGG:bfo:BRAFLDRAFT_65715
eggNOG:NOG270748 Uniprot:C3XYZ4
Length = 1475
Score = 428 (155.7 bits), Expect = 3.6e-50, Sum P(4) = 3.6e-50
Identities = 90/205 (43%), Positives = 132/205 (64%)
Query: 4 FRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICT 63
+ LP + ++T + N V +I G+TG GKTTQVPQ+IL+ + R C+I+ T
Sbjct: 138 YNPTLPITGYQEEIITTVESNSVTVIQGDTGSGKTTQVPQYILDHYARANRW--CNIVVT 195
Query: 64 QPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNL 123
QPRRI+A+S++ RVA ERG +LG VGY+V ++ + DTRL F TTG+LL++L+ +N+
Sbjct: 196 QPRRIAAISIARRVADERGWRLGGIVGYQVGMDKQQSEDTRLSFVTTGVLLQKLINTKNM 255
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLL-SRRPELRLVLMSATLDAELFSSYFG----G 178
THVI+DEVHER DF L+V + LL S +++VLMSATLD+ +F+ YF G
Sbjct: 256 NQFTHVILDEVHERDQETDFALLVARKLLRSNSRHVKVVLMSATLDSSMFAGYFSIPVRG 315
Query: 179 ----ATVINIPGFTYPVRTHFLEDI 199
A V+ + G +PV ++ED+
Sbjct: 316 ELAPAPVVTVEGRLFPVTEFYVEDL 340
Score = 202 (76.2 bits), Expect = 3.6e-50, Sum P(4) = 3.6e-50
Identities = 67/212 (31%), Positives = 103/212 (48%)
Query: 287 GAVLVFMTGWDDINSLNDKLQANRILGDPTRVLL--LTCHGSMASSEQRLIFDEPESGVR 344
G VLVF+ G +IN+L D+L A+ + TR L L H ++ S EQ +F P R
Sbjct: 392 GTVLVFLPGLAEINTL-DELLAH----ETTRYKLWVLPLHSTITSEEQAQVFVPPRPHQR 446
Query: 345 KIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXX 404
K++L+TNIAE+SIT+ D+ +VID K D N L +W S +
Sbjct: 447 KVILSTNIAESSITVPDIKYVIDFCLTKCMVCDPETNYQSLQLNWASQANCTQRKGRAGR 506
Query: 405 VQPGECYRLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
V G YR+ R YD EY +PE+ L + + + G + F+ R L +
Sbjct: 507 VSSGRAYRMVSREFYDIHLPEYGIPEMQVGALSTDTSEGINPHDGDLT-FIGRVLAA--- 562
Query: 464 LAVQNAIEYLKIIG-ALDHNEELTVLGQYLAM 494
L V + L ++G + +E+ V+G L++
Sbjct: 563 LPVDVRVGKLLLLGHVFGYLKEVLVIGASLSL 594
Score = 168 (64.2 bits), Expect = 2.9e-47, Sum P(3) = 2.9e-47
Identities = 51/188 (27%), Positives = 97/188 (51%)
Query: 477 GALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDK 536
G H+ +LT +G+ LA LP++ ++GK+L+LG +F L+ VL I A LS++ F P +
Sbjct: 545 GINPHDGDLTFIGRVLAALPVDVRVGKLLLLGHVFGYLKEVLVIGASLSLKSFFAKPF-R 603
Query: 537 KDLAE-AAKSQFSHD-YSDHLALVRAFEGWKDA-ERGL---AGYEYCW--KNFLSAPSMK 588
DL +K +S +SD LA++ A++ W+D + G+ E W +N L MK
Sbjct: 604 GDLESYRSKMAWSEGTFSDCLAMLNAYKKWQDCCQAGMFRNRQQELEWAKRNMLQLKRMK 663
Query: 589 VIDSLRKEFLSLLKDTGL-VDCDTS-ICNA---WGRDERFIRAVICYGLYPGISSIVQNG 643
+ ++ KE L + + V + + + N +D ++ V+ YP + +
Sbjct: 664 EMSAVAKELQDRLANFNIRVSLERNPLVNHSRDTSQDNLILKMVLAGAFYPNYFTCAASD 723
Query: 644 KSSSLKTM 651
++ +++ +
Sbjct: 724 EAEAVRDL 731
Score = 44 (20.5 bits), Expect = 7.5e-34, Sum P(4) = 7.5e-34
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 218 QEKMWKMSKQAPRKRKSQIASAVEDTL-KAANFNEYSSQTRESLSCWNPDCIGFNLI 273
QE W KR ++++ ++ + ANFN S R L + D NLI
Sbjct: 647 QELEWAKRNMLQLKRMKEMSAVAKELQDRLANFNIRVSLERNPLVNHSRDTSQDNLI 703
Score = 38 (18.4 bits), Expect = 3.6e-50, Sum P(4) = 3.6e-50
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 531 LAPMDKKDLAEAAKSQFSHDY-SDHLAL 557
LAP D L A S+ HD D+ L
Sbjct: 1047 LAPEDSTHLWTPADSRVEHDVPEDNFGL 1074
Score = 37 (18.1 bits), Expect = 3.6e-50, Sum P(4) = 3.6e-50
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 790 KPSVVGAQPAFISRTES 806
+P+ +G QPA R +S
Sbjct: 1408 QPNTIGQQPANRGREDS 1424
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 378 (138.1 bits), Expect = 1.1e-49, Sum P(2) = 1.1e-49
Identities = 121/426 (28%), Positives = 199/426 (46%)
Query: 276 VLCYICEKER-PGAVLVFMTGWDDINSLNDKLQANRILGDPT--RVLLLTCHGSMASSEQ 332
V+ I KE PG +LVF+TG + + +L + + DP+ ++ +L ++ + Q
Sbjct: 391 VIFQIHYKEPIPGDILVFLTGQETVEALENLVNEYATGMDPSLPKIQVLPLFAALPQAAQ 450
Query: 333 RLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWIST 392
+ +F RKI+LATNIAETS+T++ V +V+DCGKAK + LL IS
Sbjct: 451 QRVFVPAPPRTRKIILATNIAETSVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISK 510
Query: 393 VSXXXXXXXXXXVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAG 452
+ PG+CYRLY Y A E PEILR L L +K+ + +
Sbjct: 511 SAAIQRKGRAGREAPGQCYRLYTEKDYLALDEVNTPEILRCDLSQAILNMKARGVDNVIE 570
Query: 453 FLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIF- 511
F L P A++ A+ L I ALD +++ G ++A LP+ P LG++L+ + F
Sbjct: 571 F--PFLTRPPREALEKALLQLLSIEALDETGKISETGSHIAKLPLTPTLGRVLLAASDFG 628
Query: 512 -NCLEPVLTIVAGLSVRDPFL--APMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAE 568
+CL V+ I++ LSV + FL +KK+ AEAA+ DHL ++ + A
Sbjct: 629 PDCLTDVIDIISCLSVENIFLNTTSEEKKEAAEAARRDLYRREGDHLTMLATVRAY--AS 686
Query: 569 RGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDER-----F 623
+ ++ +S +M+ + +RK+ + + L+ T ++ R F
Sbjct: 687 ENTDRKAWAERHLVSHRAMQSVMDVRKQLTAQCRQAKLLPSPTESRDSDSSSIREPSPVF 746
Query: 624 IRAVICYGLYPGISSIVQNGKSSSLKTMEDGQ-VFLYSNSV--NARESEIPYPWLVFNEK 680
I G + +V +G S +T+ Q V ++ +SV + I Y VF +
Sbjct: 747 ILKSFLRGFATNTARLVPDG---SYRTVVGNQTVAIHPSSVLFGKKVEAILYNEFVFTNR 803
Query: 681 MKVNSV 686
V
Sbjct: 804 SYARGV 809
Score = 223 (83.6 bits), Expect = 1.1e-49, Sum P(2) = 1.1e-49
Identities = 62/151 (41%), Positives = 88/151 (58%)
Query: 37 KTTQVPQFILESEITSVRGAVCSIICTQPRRISAMSVSERVASERGEKLGES-----VGY 91
KTT V + + E +V G C I TQPRR++A+S++ RVA E G LG S VGY
Sbjct: 194 KTTIVQENGSKKE--AVVGG-C-IAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGY 249
Query: 92 KVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDL 151
VR + TR+ F T G+LL+ +L D L + ++VDEVHERG+N D ++ L++L
Sbjct: 250 SVRFDTSVSPSTRVKFLTEGMLLQEMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNL 309
Query: 152 LSRRPE------LRLVLMSATLDAELFSSYF 176
+S + E L+ V+MSAT D E +F
Sbjct: 310 VSGKREGRGGVPLKAVVMSATADMESLQEFF 340
Score = 157 (60.3 bits), Expect = 9.9e-43, Sum P(2) = 9.9e-43
Identities = 38/102 (37%), Positives = 59/102 (57%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILES------------ 48
+ E R+NLP + + + + +N V+++ GETG GK+TQ+PQF+++
Sbjct: 140 LYEIRKNLPIFAHGDEIRQHLRKNDVMLLIGETGSGKSTQIPQFLVDESWCRPTKTTIVQ 199
Query: 49 EITSVRGAVCS--IICTQPRRISAMSVSERVASERGEKLGES 88
E S + AV I TQPRR++A+S++ RVA E G LG S
Sbjct: 200 ENGSKKEAVVGGCIAITQPRRVAAISLARRVAEEMGTPLGSS 241
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 526 (190.2 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 149/520 (28%), Positives = 257/520 (49%)
Query: 201 DMTGYRLTPYNQIDD--YGQEKMWKMSKQAPRKRKSQIASAVEDTLKAANFNEYSSQTR- 257
D+T Y + ++ + + ++ + K+ +KR+ TL A F++Y +
Sbjct: 644 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPI 703
Query: 258 ----------ESLSCWNP--DCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDK 305
E L P D + +LI + ++ E PG +LVF+TG ++I++ +
Sbjct: 704 FTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEP--PGDILVFLTGQEEIDTACEI 761
Query: 306 L-QANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVV 363
L + + LG D +++L + ++ S Q IFD G RK+V+ATNIAETS+TI+ +
Sbjct: 762 LYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIY 821
Query: 364 FVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVY-DAF 422
+V+D G K+ Y++ L+ + IS PG+CYRLY Y D
Sbjct: 822 YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM 881
Query: 423 AEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHN 482
+PEI RT L S L +K++ + + F + +P + + A+E L +GALD
Sbjct: 882 LTTNVPEIQRTNLASTVLSLKAMGINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDE 939
Query: 483 EELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEA 542
LT LG+ +A P+EP L KMLI+ C E +LTIV+ LSV++ F P DK+ LA+
Sbjct: 940 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQ 999
Query: 543 AKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLK 602
K++F DHL L+ + WK+ + +C++NF+ A S++ +RK+ L ++
Sbjct: 1000 KKAKFHQTEGDHLTLLAVYNSWKNNK---FSNPWCYENFIQARSLRRAQDIRKQMLGIMD 1056
Query: 603 DTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNS 662
L D C G+ ++ IC G + + + +T+ D QV +Y +
Sbjct: 1057 RHKL---DVVSC---GKSTVRVQKAICSGFF---RNAAKKDPQEGYRTLIDQQV-VYIHP 1106
Query: 663 VNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLF 702
+A + P W+V++E + ++++ T + L+ F
Sbjct: 1107 SSALFNRQP-EWVVYHELVLTTKEYMREVTTIDPRWLVEF 1145
Score = 422 (153.6 bits), Expect = 8.2e-36, P = 8.2e-36
Identities = 88/198 (44%), Positives = 130/198 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+LE R +LP YK K +L+ A+ NQ++I+ GETG GKTTQ+ Q++ E+ TS RG I
Sbjct: 527 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTS-RG---KI 582
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RV+ E G LG+ VGY +R E +T + + T G+LLR L+D
Sbjct: 583 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 642
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L +++DE HER ++ D L +LK + +R +++L++ SATLDA FS YF A
Sbjct: 643 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAP 702
Query: 181 VINIPGFTYPVRTHFLED 198
+ IPG TYPV + ++
Sbjct: 703 IFTIPGRTYPVEILYTKE 720
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 526 (190.2 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 149/520 (28%), Positives = 257/520 (49%)
Query: 201 DMTGYRLTPYNQIDD--YGQEKMWKMSKQAPRKRKSQIASAVEDTLKAANFNEYSSQTR- 257
D+T Y + ++ + + ++ + K+ +KR+ TL A F++Y +
Sbjct: 667 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPI 726
Query: 258 ----------ESLSCWNP--DCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDK 305
E L P D + +LI + ++ E PG +LVF+TG ++I++ +
Sbjct: 727 FTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEP--PGDILVFLTGQEEIDTACEI 784
Query: 306 L-QANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVV 363
L + + LG D +++L + ++ S Q IFD G RK+V+ATNIAETS+TI+ +
Sbjct: 785 LYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIY 844
Query: 364 FVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVY-DAF 422
+V+D G K+ Y++ L+ + IS PG+CYRLY Y D
Sbjct: 845 YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM 904
Query: 423 AEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHN 482
+PEI RT L S L +K++ + + F + +P + + A+E L +GALD
Sbjct: 905 LTTNVPEIQRTNLASTVLSLKAMGINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDE 962
Query: 483 EELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEA 542
LT LG+ +A P+EP L KMLI+ C E +LTIV+ LSV++ F P DK+ LA+
Sbjct: 963 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQ 1022
Query: 543 AKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLK 602
K++F DHL L+ + WK+ + +C++NF+ A S++ +RK+ L ++
Sbjct: 1023 KKAKFHQTEGDHLTLLAVYNSWKNNK---FSNPWCYENFIQARSLRRAQDIRKQMLGIMD 1079
Query: 603 DTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNS 662
L D C G+ ++ IC G + + + +T+ D QV +Y +
Sbjct: 1080 RHKL---DVVSC---GKSTVRVQKAICSGFF---RNAAKKDPQEGYRTLIDQQV-VYIHP 1129
Query: 663 VNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLF 702
+A + P W+V++E + ++++ T + L+ F
Sbjct: 1130 SSALFNRQP-EWVVYHELVLTTKEYMREVTTIDPRWLVEF 1168
Score = 420 (152.9 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 87/198 (43%), Positives = 130/198 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
++E R +LP YK K +L+ A+ NQ++I+ GETG GKTTQ+ Q++ E+ TS RG I
Sbjct: 550 IIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTS-RG---KI 605
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RV+ E G LG+ VGY +R E +T + + T G+LLR L+D
Sbjct: 606 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 665
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L +++DE HER ++ D L +LK + +R +++L++ SATLDA FS YF A
Sbjct: 666 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAP 725
Query: 181 VINIPGFTYPVRTHFLED 198
+ IPG TYPV + ++
Sbjct: 726 IFTIPGRTYPVEILYTKE 743
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 526 (190.2 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 149/520 (28%), Positives = 257/520 (49%)
Query: 201 DMTGYRLTPYNQIDD--YGQEKMWKMSKQAPRKRKSQIASAVEDTLKAANFNEYSSQTR- 257
D+T Y + ++ + + ++ + K+ +KR+ TL A F++Y +
Sbjct: 671 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPI 730
Query: 258 ----------ESLSCWNP--DCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDK 305
E L P D + +LI + ++ E PG +LVF+TG ++I++ +
Sbjct: 731 FTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEP--PGDILVFLTGQEEIDTACEI 788
Query: 306 L-QANRILG-DPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVV 363
L + + LG D +++L + ++ S Q IFD G RK+V+ATNIAETS+TI+ +
Sbjct: 789 LYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIY 848
Query: 364 FVIDCGKAKETSYDALNNTSCLLPSWISTVSXXXXXXXXXXVQPGECYRLYPRCVY-DAF 422
+V+D G K+ Y++ L+ + IS PG+CYRLY Y D
Sbjct: 849 YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM 908
Query: 423 AEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHN 482
+PEI RT L S L +K++ + + F + +P + + A+E L +GALD
Sbjct: 909 LTTNVPEIQRTNLASTVLSLKAMGINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDE 966
Query: 483 EELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEA 542
LT LG+ +A P+EP L KMLI+ C E +LTIV+ LSV++ F P DK+ LA+
Sbjct: 967 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQ 1026
Query: 543 AKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLK 602
K++F DHL L+ + WK+ + +C++NF+ A S++ +RK+ L ++
Sbjct: 1027 KKAKFHQTEGDHLTLLAVYNSWKNNK---FSNPWCYENFIQARSLRRAQDIRKQMLGIMD 1083
Query: 603 DTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKTMEDGQVFLYSNS 662
L D C G+ ++ IC G + + + +T+ D QV +Y +
Sbjct: 1084 RHKL---DVVSC---GKSTVRVQKAICSGFF---RNAAKKDPQEGYRTLIDQQV-VYIHP 1133
Query: 663 VNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLF 702
+A + P W+V++E + ++++ T + L+ F
Sbjct: 1134 SSALFNRQP-EWVVYHELVLTTKEYMREVTTIDPRWLVEF 1172
Score = 420 (152.9 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 87/198 (43%), Positives = 130/198 (65%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
++E R +LP YK K +L+ A+ NQ++I+ GETG GKTTQ+ Q++ E+ TS RG I
Sbjct: 554 IIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTS-RG---KI 609
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RV+ E G LG+ VGY +R E +T + + T G+LLR L+D
Sbjct: 610 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 669
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L +++DE HER ++ D L +LK + +R +++L++ SATLDA FS YF A
Sbjct: 670 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAP 729
Query: 181 VINIPGFTYPVRTHFLED 198
+ IPG TYPV + ++
Sbjct: 730 IFTIPGRTYPVEILYTKE 747
WARNING: HSPs involving 66 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 901 877 0.00085 122 3 11 22 0.38 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 316
No. of states in DFA: 626 (67 KB)
Total size of DFA: 421 KB (2203 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 69.11u 0.12s 69.23t Elapsed: 00:00:03
Total cpu time: 69.21u 0.12s 69.33t Elapsed: 00:00:03
Start: Sat May 11 10:07:37 2013 End: Sat May 11 10:07:40 2013
WARNINGS ISSUED: 2