BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046397
(901 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VHK9|DHX36_MOUSE Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36
PE=2 SV=2
Length = 1001
Score = 632 bits (1630), Expect = e-180, Method: Compositional matrix adjust.
Identities = 341/771 (44%), Positives = 492/771 (63%), Gaps = 23/771 (2%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M FR+ LP+Y + L+ I+ +QV +ISGETGCGKTTQV QFIL++ I +G+ C I
Sbjct: 193 MQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRI 252
Query: 61 ICTQPRRISAMSVSERVASERGEKLGE--SVGYKVRLEG-MKGRDTRLLFCTTGILLRRL 117
+CTQPRRISA+SV+ERVA+ER E G S GY++RL+ + + +L+CTTGI+L+ L
Sbjct: 253 VCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 312
Query: 118 LVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG 177
D L V+H+++DE+HER + D L+ V+KDLL R +L+++LMSATL+AE FS YFG
Sbjct: 313 QSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFG 372
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
+I+IPGFT+PV + LEDI++ Y P +Q + Q K M R+ K +
Sbjct: 373 NCPMIHIPGFTFPVVEYLLEDIIEKIRY--VP-DQKEHRSQFKRGFMQGHVNRQEKEE-K 428
Query: 238 SAVEDTLKAANFNE----YSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFM 293
A+ A E YS+ T + L + D + NLI ++ YI +E GA+LVF+
Sbjct: 429 EAIYKERWPAYIKELRTRYSASTVDVLQMMDDDKVDLNLIAALIRYIVLEEEDGAILVFL 488
Query: 294 TGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
GWD+I++L+D L + +++ + L++ H M + Q +F + GVRKIV+ATNIA
Sbjct: 489 PGWDNISTLHDLLMS-QVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIA 547
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRL 413
ETSITI+DVV+VID GK KET +D NN S + W+S +A+QR+GRAGRVQPG CY L
Sbjct: 548 ETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHL 607
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
Y +YQLPEILRTPL+ LCLQIK LRLG IA FLSR + P AV +I++L
Sbjct: 608 YNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHL 667
Query: 474 KIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAP 533
+ ALD EELT LG +LA LP+EP +GKM++ GA+F CL+PVLTI A LS +DPF+ P
Sbjct: 668 MELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIP 727
Query: 534 MDKKDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPSMKVI 590
+ K+ +A+A + + + + SDHL +V AFEGW++A+R YE YCW+ FLS+ +++++
Sbjct: 728 LGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQML 787
Query: 591 DSLRKEFLSLLKDTGLVDCDT---SICNAWGRDERFIRAVICYGLYPGISSIVQN-GKSS 646
+++ +F L G V + N +E+ I+AVIC GLYP ++ I N GK
Sbjct: 788 HNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIRLNLGKKR 847
Query: 647 SL---KTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFG 703
+ T DG V ++ SVN +++ Y WL+++ KM+ +S++L D T VS LL FG
Sbjct: 848 KMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFG 907
Query: 704 GSIS-QGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPR 753
G IS Q + D + + ++ F +A + + +R+ELD L+Q K+ +P
Sbjct: 908 GDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDSLLQEKIESPH 958
>sp|Q9H2U1|DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36
PE=1 SV=2
Length = 1008
Score = 619 bits (1597), Expect = e-176, Method: Compositional matrix adjust.
Identities = 338/770 (43%), Positives = 485/770 (62%), Gaps = 23/770 (2%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M FR LP+Y + L+ I +QV +ISGETGCGKTTQV QFIL++ I +G+ C I
Sbjct: 200 MQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRI 259
Query: 61 ICTQPRRISAMSVSERVASERGEKLG--ESVGYKVRLEG-MKGRDTRLLFCTTGILLRRL 117
+CTQPRRISA+SV+ERVA+ER E G S GY++RL+ + + +L+CTTGI+L+ L
Sbjct: 260 VCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 319
Query: 118 LVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG 177
D L V+H+++DE+HER + D L+ V+KDLL+ R +L+++LMSATL+AE FS YFG
Sbjct: 320 QSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFG 379
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
+I+IPGFT+PV + LED+++ Y P Q + Q K M R+ K +
Sbjct: 380 NCPMIHIPGFTFPVVEYLLEDVIEKIRY--VP-EQKEHRSQFKRGFMQGHVNRQEKEEKE 436
Query: 238 SAVE----DTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFM 293
+ + D ++ YS+ T + + D + NLI ++ YI +E GA+LVF+
Sbjct: 437 AIYKERWPDYVRELR-RRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFL 495
Query: 294 TGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
GWD+I++L+D L + +++ + L++ H M + Q +F GVRKIV+ATNIA
Sbjct: 496 PGWDNISTLHDLLMS-QVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIA 554
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRL 413
ETSITI+DVV+VID GK KET +D NN S + W+S +A+QR+GRAGRVQPG CY L
Sbjct: 555 ETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHL 614
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
Y +YQLPEILRTPL+ LCLQIK LRLG IA FLSR + P AV +I +L
Sbjct: 615 YNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHL 674
Query: 474 KIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAP 533
+ ALD EELT LG +LA LP+EP +GKM++ GA+F CL+PVLTI A LS +DPF+ P
Sbjct: 675 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIP 734
Query: 534 MDKKDLAEAAKSQFSHDY-SDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPSMKVI 590
+ K+ +A+A + + + D SDHL +V AFEGW++A R YE YCW+ FLS+ +++++
Sbjct: 735 LGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQML 794
Query: 591 DSLRKEFLSLLKDTGLVDCDTSI---CNAWGRDERFIRAVICYGLYPGISSIVQN-GKSS 646
+++ +F L G V N +E+ I+AVIC GLYP ++ I N GK
Sbjct: 795 HNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKR 854
Query: 647 SL---KTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFG 703
+ T DG V ++ SVN +++ Y WL+++ KM+ +S++L D T VS LL FG
Sbjct: 855 KMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFG 914
Query: 704 GSIS-QGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNP 752
G IS Q + D + ++ F +A + + +R+ELD L+Q K+ +P
Sbjct: 915 GDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESP 964
>sp|Q6P158|DHX57_HUMAN Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens GN=DHX57
PE=1 SV=2
Length = 1386
Score = 567 bits (1461), Expect = e-160, Method: Compositional matrix adjust.
Identities = 327/843 (38%), Positives = 507/843 (60%), Gaps = 96/843 (11%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R++LPA++E+ +L + ++QVV+ISG TGCGKTTQ+PQFIL+ + V +I
Sbjct: 537 ILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANI 596
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
ICTQPRRISA+SV+ERVA ER E++G +VGY++RLE +K TRLL+CTTG+LLRRL D
Sbjct: 597 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 656
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+GV+H+IVDEVHER DFLL+VLKD++S+RP L+++LMSATL+AELFS YF
Sbjct: 657 TALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCP 716
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
VI IPG T+PV FLED + +T Y L +PY M ++SK+ + R+++ A
Sbjct: 717 VITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPY-------MRSMKQISKEKLKARRNRTA 769
Query: 238 -SAVEDTLK-------------------------AANFNEYSSQTRESLSCWNPDCIGFN 271
VE+ L+ A + S +++S + + +
Sbjct: 770 FEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVNLE 829
Query: 272 LIEYVLCYICEKER---PGAVLVFMTGWDDINSLNDKLQANRILGD--PTRVLLLTCHGS 326
LIE +L +I + + PGA+LVF+ G +I L ++LQ+N + + R ++ H S
Sbjct: 830 LIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSS 889
Query: 327 MASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLL 386
++S EQ+ +F +P +GV KI+++TNIAETSITI+DVV+VID GK KE YDA L
Sbjct: 890 LSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLE 949
Query: 387 PSWISTVSAQQRRGRAGRVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSL 445
+++S +A QR+GRAGRV G C+ L+ Y+ + QLPEI R PL+ LCL+IK L
Sbjct: 950 DTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKIL 1009
Query: 446 RL---GTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLG 502
+ + SR ++ P +++ + L+ +GAL +E LT LG +LA LP++ ++G
Sbjct: 1010 EMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIG 1069
Query: 503 KMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFE 562
K+++ G+IF CL+P LTI A L+ + PF++P DKK+ A K +F+ SD+LAL++A++
Sbjct: 1070 KLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYK 1129
Query: 563 GWK-DAERGL-AGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDT---------------- 604
GW+ + G+ A Y YC +NFLS ++ + SL+++F LL D
Sbjct: 1130 GWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRA 1189
Query: 605 ----GLVDCDTSICNAWGRDERFIRAVICYGLYPGI---------------SSIVQNGKS 645
G++D N+ + + I A++C LYP + ++ KS
Sbjct: 1190 QGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKS 1249
Query: 646 SSLK--TMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFG 703
+ LK T DG V ++ +SVN + P+L+++EK+K + VF++D + VS L+LFG
Sbjct: 1250 AELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLFG 1309
Query: 704 GSISQGEIDGHLK-------MMGGYLEFF-MNPSVADMYQCIRRELDELIQNKLLNPRLN 755
G G+++ L+ + G++ F + VA++ + +R ELD+L+Q+K+ NP ++
Sbjct: 1310 G----GQVNVQLQRGEFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSID 1365
Query: 756 IHT 758
+ T
Sbjct: 1366 LCT 1368
>sp|Q6P5D3|DHX57_MOUSE Putative ATP-dependent RNA helicase DHX57 OS=Mus musculus GN=Dhx57
PE=2 SV=2
Length = 1388
Score = 562 bits (1448), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/842 (39%), Positives = 505/842 (59%), Gaps = 97/842 (11%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R+ LPA++E+ +L +S++QVV+ISG TGCGKTTQ+PQFIL++ + V +I
Sbjct: 538 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 597
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
ICTQPRRISA+SV+ERVA ER E++G +VGY++RLE +K TRLL+CTTG+LLRRL D
Sbjct: 598 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 657
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
L+GVTH+IVDEVHER DFLL+VLKD++ +R L+++LMSATLDA LFS YF
Sbjct: 658 ATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCP 717
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
VI IPG +PV FLED L +T Y L +PY M +++K+ + R ++ A
Sbjct: 718 VITIPGRAFPVDQFFLEDALAVTRYVLQDGSPY-------MRSMKQIAKEKLKARHNRTA 770
Query: 238 S------------------AVEDTL--KAANFNE-------YSSQTRESLSCWNPDCIGF 270
+V+DT+ + +F + S +++S + + +
Sbjct: 771 QEEVEEDLRLSLHLQDEEESVKDTIPDQQLDFKQLLIRYKGVSKSVIKTMSVMDFEKVNL 830
Query: 271 NLIEYVLCYICEKER---PGAVLVFMTGWDDINSLNDKLQANRILGD--PTRVLLLTCHG 325
LIE +L +I + + PGAVLVF+ G +I L ++LQ+N + + R ++ H
Sbjct: 831 ELIEALLEWIVDGKHAYPPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 890
Query: 326 SMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCL 385
S++S EQ+ +F +P GV KI+++TNIAETSITI+DVV+VID GK KE YDA L
Sbjct: 891 SLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESL 950
Query: 386 LPSWISTVSAQQRRGRAGRVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKS 444
+++S +A QR+GRAGRV G C+ L+ Y+ + QLPEI R PL+ LCL+IK
Sbjct: 951 EDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKI 1010
Query: 445 LRL---GTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKL 501
L + + SR ++ P + +++ + L+ +GAL +E+LT LG +LA LP++ ++
Sbjct: 1011 LEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRI 1070
Query: 502 GKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAF 561
GK+++LG+IF CL+P LTI A L+ + PF++P DKK+ A K +F+ SD+LAL+ A+
Sbjct: 1071 GKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAY 1130
Query: 562 EGWK--DAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLV------------ 607
+GW+ E A Y YC +NFLS +++ + SL+++F LL D G V
Sbjct: 1131 KGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFVKEGLRAKEIEKR 1190
Query: 608 --------DCDTSICNAWGRDERFIRAVICYGLYPGI--------------SSIVQ-NGK 644
D N + + I AV+C LYP + S +V+ K
Sbjct: 1191 AQGGDGVLDATGEEANTNAENPKLISAVLCAALYPNVVQVKTPEGKFQKTSSGVVRLQPK 1250
Query: 645 SSSLK--TMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLF 702
S+ LK T DG V ++ +SVN + P+L+++EK+K + VF++D + VS L+LF
Sbjct: 1251 SAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLF 1310
Query: 703 GGSISQGEIDGHLK-------MMGGYLEFF-MNPSVADMYQCIRRELDELIQNKLLNPRL 754
GG G+++ L+ + G++ F + VA++ + +R ELD+L+Q+K+ NP +
Sbjct: 1311 GG----GQVNVQLQRGAFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSM 1366
Query: 755 NI 756
++
Sbjct: 1367 DL 1368
>sp|A3KMI0|DHX29_XENLA ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2 SV=1
Length = 1362
Score = 536 bits (1380), Expect = e-151, Method: Compositional matrix adjust.
Identities = 315/791 (39%), Positives = 474/791 (59%), Gaps = 39/791 (4%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEI-TSVRGAVCS 59
+L R LP + N +L + +++V++++GETG GK+TQVPQF+LE + C+
Sbjct: 559 LLNDREQLPVFARGNFILETLKRHRVIVVAGETGSGKSTQVPQFLLEDLLFNGGSPGKCN 618
Query: 60 IICTQPRRISAMSVSERVASERGEKLGES-----VGYKVRLEGMKGRDTRLLFCTTGILL 114
I+CTQPRRISAMS++ RV E G G GY++R+E G TRLL+CTTGILL
Sbjct: 619 IVCTQPRRISAMSLATRVCEELGCDSGPGGKNSLCGYQIRMESRTGEATRLLYCTTGILL 678
Query: 115 RRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSS 174
R+L D LK ++H+IVDEVHER + DFLLI+L+++L +R +L LVLMSAT+D E FSS
Sbjct: 679 RKLQEDSMLKNISHIIVDEVHERTVQSDFLLIILREILHKRSDLHLVLMSATVDCEKFSS 738
Query: 175 YFGGATVINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQ--IDDYGQEKMWKMSKQAP 229
YF +I I G T+PV LED+++ TG+ L + Y Q ++D + + K
Sbjct: 739 YFTHCPIIRISGRTFPVEVFHLEDVVEATGFVLEQDSEYCQKFLEDEEEITLSVTGKGGS 798
Query: 230 RKRKSQIASAVEDT--LKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCY--ICEKER 285
K+ + A T A + YSSQTR ++ NP+ I +LI +L + I + R
Sbjct: 799 SKKYQEFIPAQSGTGLDLGARYQRYSSQTRHAVLYMNPNKINLDLILELLVFLDISPEYR 858
Query: 286 --PGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGV 343
GAVL+F+ G DI L D L +++ D R L+ H ++S +Q F P +G
Sbjct: 859 NVEGAVLIFLPGLADIQQLYDILSSDKRFHDRRRYKLIALHSILSSQDQAEAFILPPAGT 918
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAG 403
RKIVLATNIAET ITI DVVFVID G+ KE Y + S L+ ++IS SA QR+GRAG
Sbjct: 919 RKIVLATNIAETGITIPDVVFVIDAGRTKENRYHESSQMSSLVETFISKASALQRQGRAG 978
Query: 404 RVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
RV+ G C+RLY R +++F EY +PEILR PL+ LCL I LG+ FLS+AL P+L
Sbjct: 979 RVRNGYCFRLYTRERFESFMEYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQL 1038
Query: 464 LAVQNAIEYLKIIGALDHNE-ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ NA+ L+ IGA + ++ +LT LGQ+LA LP+ K+GKMLI GAIF CL+ V T+ A
Sbjct: 1039 QVISNAMSLLRKIGACELSQPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDAVATLAA 1098
Query: 523 GLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWK--DAERGLAGYEYCWKN 580
++ + PF+ P+ +KD A+ AKS + SDH+ + RA+ GWK E A YC KN
Sbjct: 1099 TMTEKSPFVTPIGEKDRADLAKSSMAVANSDHVTIFRAYLGWKAIRPEGYAAEMSYCRKN 1158
Query: 581 FLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSI--------CNAWGRDE-RFIRAVICYG 631
FL+ ++ I+ +++E + L++ G +C S+ A +E ++A++ G
Sbjct: 1159 FLNRKALLTIEDVKQELIRLVRAAGF-ECPRSVEANGLSSAMKALSAEETSLLKAILTAG 1217
Query: 632 LYPGISSIVQNG------KSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNS 685
LY + I+ K + + G+ ++ +SVN R+ +I Y WL++ EK+K +
Sbjct: 1218 LYDNVGKILFTKSVDITEKLACIVETAQGKAQVHPSSVN-RDLQI-YGWLLYQEKVKYSK 1275
Query: 686 VFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELI 745
VFL+++T +S +LLFGG I+ + L + ++ F +A +++ +R ++ ++
Sbjct: 1276 VFLRETTLISPFPVLLFGGDIAVQHRE-RLLTVDDWIHFQAPVKIAVIFKELRILIESVL 1334
Query: 746 QNKLLNPRLNI 756
+ KL NP++++
Sbjct: 1335 KQKLENPKMSL 1345
>sp|Q6PGC1|DHX29_MOUSE ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=2 SV=1
Length = 1365
Score = 520 bits (1340), Expect = e-146, Method: Compositional matrix adjust.
Identities = 311/814 (38%), Positives = 485/814 (59%), Gaps = 54/814 (6%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGA-VCS 59
+L+ R+ LP +K ++ ++ + +++VV+++GETG GK+TQVP F+LE + GA C+
Sbjct: 564 LLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGARKCN 623
Query: 60 IICTQPRRISAMSVSERVASERGEKLGES-----VGYKVRLEGMKGRDTRLLFCTTGILL 114
I+CTQPRRISA+S++ RV E G + G GY++R+E TRLL+CTTG+LL
Sbjct: 624 IVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLL 683
Query: 115 RRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSS 174
R+L D L V+HVIVDEVHER + DFLL++LK++L +R +L L+LMSAT+D++ FS+
Sbjct: 684 RKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFST 743
Query: 175 YFGGATVINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQ-IDDYGQEKMWKMSKQAPR 230
YF ++ I G +YPV LEDI++ TG+ L + Y Q + +E ++ +A
Sbjct: 744 YFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGG 803
Query: 231 KRKSQ----IASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKER- 285
+K Q + S L + +YSS+T+ ++ NP I +LI +L Y+ + +
Sbjct: 804 VKKYQEYIPVQSGASPELNPF-YQKYSSRTQHAILYMNPHKINLDLILELLVYLDKSPQF 862
Query: 286 ---PGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESG 342
GAVL+F+ G I L D L ++R R ++ H +++ +Q F P G
Sbjct: 863 RNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYS-ERYQVIALHSVLSTQDQAAAFMFPPPG 921
Query: 343 VRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRA 402
VRKIVLATNIAET ITI DVVFVID G+ KE Y + S L+ +++S SA QR+GRA
Sbjct: 922 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRA 981
Query: 403 GRVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPE 462
GRV+ G C+RLY R ++ F +Y +PEILR PL+ LCL I LG+ FLS+AL P+
Sbjct: 982 GRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQ 1041
Query: 463 LLAVQNAIEYLKIIGALDHNE-ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIV 521
L + NA+ L+ IGA + NE +LT LGQ+LA LP+ K+GKMLI GAIF CLEPV T+
Sbjct: 1042 LQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLA 1101
Query: 522 AGLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYE----YC 577
A ++ + PF+ P+ +KD A+ AKS + SDHL + A+ GWK A++ G+ YC
Sbjct: 1102 AVMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQE-GGFRSEISYC 1160
Query: 578 WKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAW-GR---------DERFIRAV 627
+NFL+ S+ ++ +++E + L+K G S +W GR D ++AV
Sbjct: 1161 QRNFLNRTSLLTLEDVKQELMKLVKAAGF-----SSSPSWEGRKGPQTLSFQDIALLKAV 1215
Query: 628 ICYGLYPGISSIV------QNGKSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKM 681
+ GLY + I+ K + + G+ ++ +SVN R+ + Y WL++ EK+
Sbjct: 1216 LAAGLYDSVGKIMCTKSVDVTEKLACMVETAQGKAQVHPSSVN-RDLQT-YGWLLYQEKV 1273
Query: 682 KVNSVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMG--GYLEFFMNPSVADMYQCIRR 739
+ V+L+++T ++ +LLFGG I E+ +++ G++ F +A +++ +R
Sbjct: 1274 RYTRVYLRETTLITPFPVLLFGGDI---EVQHRERLLSVDGWIYFQAPVKIAVIFKQLRV 1330
Query: 740 ELDELIQNKLLNPRLNIHTHEDLLAAVRLLVAED 773
+D +++ KL NP++++ + L L+ E+
Sbjct: 1331 LIDSVLRKKLENPKMSLENDKILQIITELIKTEN 1364
>sp|Q7Z478|DHX29_HUMAN ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2
Length = 1369
Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust.
Identities = 308/811 (37%), Positives = 479/811 (59%), Gaps = 45/811 (5%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEI-TSVRGAVCS 59
+L+ R+ LP +K ++ ++ + +++VV+++GETG GK+TQVP F+LE + + C+
Sbjct: 565 LLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCN 624
Query: 60 IICTQPRRISAMSVSERVASERGEKLGES-----VGYKVRLEGMKGRDTRLLFCTTGILL 114
I+CTQPRRISA+S++ RV E G + G GY++R+E TRLL+CTTG+LL
Sbjct: 625 IVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLL 684
Query: 115 RRLLVDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSS 174
R+L D L V+HVIVDEVHER + DFLLI+LK++L +R +L L+LMSAT+D+E FS+
Sbjct: 685 RKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFST 744
Query: 175 YFGGATVINIPGFTYPVRTHFLEDILDMTGYRL---TPYNQ-IDDYGQEKMWKMSKQAPR 230
YF ++ I G +YPV LEDI++ TG+ L + Y Q + +E ++ +A
Sbjct: 745 YFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEVTINVTSKAGG 804
Query: 231 KRKSQIASAVEDTLKA---ANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKER-- 285
+K Q V+ A + +YSS+T+ ++ NP I +LI +L Y+ + +
Sbjct: 805 IKKYQEYIPVQTGAHADLNPFYQKYSSRTQHAILYMNPHKINLDLILELLAYLDKSPQFR 864
Query: 286 --PGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGV 343
GAVL+F+ G I L D L +R R ++ H +++ +Q F P GV
Sbjct: 865 NIEGAVLIFLPGLAHIQQLYDLLSNDRRFYS-ERYKVIALHSILSTQDQAAAFTLPPPGV 923
Query: 344 RKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAG 403
RKIVLATNIAET ITI DVVFVID G+ KE Y + S L+ +++S SA QR+GRAG
Sbjct: 924 RKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAG 983
Query: 404 RVQPGECYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPEL 463
RV+ G C+R+Y R ++ F +Y +PEILR PL+ LCL I LG+ FLS+AL P+L
Sbjct: 984 RVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQL 1043
Query: 464 LAVQNAIEYLKIIGALDHNE-ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVA 522
+ NA+ L+ IGA + NE +LT LGQ+LA LP+ K+GKMLI GAIF CL+PV T+ A
Sbjct: 1044 QVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAA 1103
Query: 523 GLSVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYE----YCW 578
++ + PF P+ +KD A+ AKS + SDHL + A+ GWK A R GY YC
Sbjct: 1104 VMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKA-RQEGGYRSEITYCR 1162
Query: 579 KNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDER--------FIRAVICY 630
+NFL+ S+ ++ +++E + L+K G TS R + ++AV+
Sbjct: 1163 RNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTSTSWEGNRASQTLSFQEIALLKAVLVA 1222
Query: 631 GLYPGISSIVQNG------KSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVN 684
GLY + I+ K + + G+ ++ +SVN R+ + + WL++ EK++
Sbjct: 1223 GLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSVN-RDLQT-HGWLLYQEKIRYA 1280
Query: 685 SVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMG--GYLEFFMNPSVADMYQCIRRELD 742
V+L+++T ++ +LLFGG I E+ +++ G++ F +A +++ +R +D
Sbjct: 1281 RVYLRETTLITPFPVLLFGGDI---EVQHRERLLSIDGWIYFQAPVKIAVIFKQLRVLID 1337
Query: 743 ELIQNKLLNPRLNIHTHEDLLAAVRLLVAED 773
+++ KL NP++++ + L L+ E+
Sbjct: 1338 SVLRKKLENPKMSLENDKILQIITELIKTEN 1368
>sp|Q5BJS0|DHX30_RAT Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus
GN=Dhx30 PE=1 SV=1
Length = 1194
Score = 509 bits (1310), Expect = e-143, Method: Compositional matrix adjust.
Identities = 295/722 (40%), Positives = 417/722 (57%), Gaps = 69/722 (9%)
Query: 7 NLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPR 66
LP ++ +L+AI Q+ VV+ISG+TGCGKTT++PQ +LE +T RGA C++I TQPR
Sbjct: 433 QLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 492
Query: 67 RISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKG 125
RISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+G
Sbjct: 493 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 552
Query: 126 VTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIP 185
V+HVIVDEVHER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +P
Sbjct: 553 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 612
Query: 186 GFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVEDTLK 245
GF YPV+ H+LEDIL G P+ R +S+ A++
Sbjct: 613 GFMYPVKEHYLEDILAKLGKHQYPHRH-----------------RHHESEDECALD---- 651
Query: 246 AANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDK 305
+L+ ++ +I + PG +L F+ GW +I + +
Sbjct: 652 ------------------------LDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQR 687
Query: 306 LQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFV 365
LQ + + ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETSIT+ND+V V
Sbjct: 688 LQEALGMHE-SKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHV 746
Query: 366 IDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCVYDAFAEY 425
+D G KE YD SCL W+S + QRRGRAGR Q G Y L+PR + +
Sbjct: 747 VDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPF 806
Query: 426 QLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEE 484
Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ IG LD E
Sbjct: 807 QVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREY 866
Query: 485 LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK 544
LT LGQ LA + +P+L K ++L AIF CL P+L +V+ L+ RDPF + + + + K
Sbjct: 867 LTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVK 925
Query: 545 SQFSHDY-SDHLALVRAFEGWKDAERG---LAGYEYCWKNFLSAPSMKVIDSLRKEFLSL 600
+ SHD SDHLA VRA GW++ R + Y +N L APS++ I L K+F
Sbjct: 926 ALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSEN 985
Query: 601 LKDTGLV----DC--DTSICNAWGRDERFIRAVICYGLYPGI-----SSIVQNGK---SS 646
+ + LV DC ++ CN + +E ++ V+ GLYP + + + GK +S
Sbjct: 986 IYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNS 1045
Query: 647 SLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVN-SVFLKDSTAVSD-SVLLLFGG 704
+ G + L+ +++N + + WL + +K N SVF++DS+ V +VLLL G
Sbjct: 1046 VTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDG 1105
Query: 705 SI 706
+
Sbjct: 1106 DV 1107
>sp|Q99PU8|DHX30_MOUSE Putative ATP-dependent RNA helicase DHX30 OS=Mus musculus GN=Dhx30
PE=2 SV=1
Length = 1217
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 295/722 (40%), Positives = 417/722 (57%), Gaps = 69/722 (9%)
Query: 7 NLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPR 66
LP ++ +L+AI Q+ VV+ISG+TGCGKTT++PQ +LE +T RGA C++I TQPR
Sbjct: 456 QLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 515
Query: 67 RISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKG 125
RISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+G
Sbjct: 516 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 575
Query: 126 VTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIP 185
V+HVIVDEVHER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +P
Sbjct: 576 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 635
Query: 186 GFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVEDTLK 245
GF YPV+ H+LEDIL G P+ R +S+ A++
Sbjct: 636 GFMYPVKEHYLEDILAKLGKHQYPHRH-----------------RHHESEDECALD---- 674
Query: 246 AANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDK 305
+L+ ++ +I + PG +L F+ GW +I + +
Sbjct: 675 ------------------------LDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQR 710
Query: 306 LQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFV 365
LQ + + ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETSIT+ND+V V
Sbjct: 711 LQEALGMHE-SKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHV 769
Query: 366 IDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCVYDAFAEY 425
+D G KE YD SCL W+S + QRRGRAGR Q G Y L+PR + +
Sbjct: 770 VDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPF 829
Query: 426 QLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEE 484
Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ IG LD E
Sbjct: 830 QVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREY 889
Query: 485 LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK 544
LT LGQ LA + +P+L K ++L AIF CL P+L +V+ L+ RDPF + + + + K
Sbjct: 890 LTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVK 948
Query: 545 SQFSHDY-SDHLALVRAFEGWKDAERG---LAGYEYCWKNFLSAPSMKVIDSLRKEFLSL 600
+ SHD SDHLA VRA GW++ R + Y +N L APS++ I L K+F
Sbjct: 949 ALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSEN 1008
Query: 601 LKDTGLV----DC--DTSICNAWGRDERFIRAVICYGLYPGI-----SSIVQNGK---SS 646
+ + LV DC ++ CN + +E ++ V+ GLYP + + + GK +S
Sbjct: 1009 IYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNS 1068
Query: 647 SLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVN-SVFLKDSTAVSD-SVLLLFGG 704
+ G + L+ +++N + + WL + +K N SVF++DS+ V +VLLL G
Sbjct: 1069 VTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDG 1128
Query: 705 SI 706
+
Sbjct: 1129 DV 1130
>sp|Q2NKY8|DHX30_BOVIN Putative ATP-dependent RNA helicase DHX30 OS=Bos taurus GN=DHX30 PE=2
SV=1
Length = 1220
Score = 505 bits (1301), Expect = e-142, Method: Compositional matrix adjust.
Identities = 294/722 (40%), Positives = 416/722 (57%), Gaps = 69/722 (9%)
Query: 7 NLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPR 66
LP ++ +L AI Q+ VV+I+G+TGCGKTT++PQ +LE +T RGA C++I TQPR
Sbjct: 459 QLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 518
Query: 67 RISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKG 125
RISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+G
Sbjct: 519 RISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 578
Query: 126 VTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIP 185
V+HV+VDE HER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +P
Sbjct: 579 VSHVVVDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 638
Query: 186 GFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVEDTLK 245
GF YPV+ H+LEDIL G P+ R +S+ A++
Sbjct: 639 GFMYPVKEHYLEDILAKLGKHQYPHRH-----------------RHHESEDECALD---- 677
Query: 246 AANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDK 305
+L+ ++ +I + PG +L F+ GW +I + +
Sbjct: 678 ------------------------LDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQR 713
Query: 306 LQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFV 365
LQ + + ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETSITIND+V V
Sbjct: 714 LQEALGMHE-SKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHV 772
Query: 366 IDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCVYDAFAEY 425
+D G KE YD SCL W+S + QRRGRAGR Q G Y L+PR + A +
Sbjct: 773 VDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPF 832
Query: 426 QLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEE 484
Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ IG LD E
Sbjct: 833 QVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREY 892
Query: 485 LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK 544
LT LGQ LA + +P+L K ++L AIF CL P+L +V+ L+ RDPF + + + + K
Sbjct: 893 LTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVK 951
Query: 545 SQFSHDY-SDHLALVRAFEGWKDAERGL---AGYEYCWKNFLSAPSMKVIDSLRKEFLSL 600
+ SHD SDHLA VRA GW++ R + Y +N L APS++ I L K+F
Sbjct: 952 ALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSEN 1011
Query: 601 LKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGI-----SSIVQNGK---SS 646
+ + LV DC ++ CN + +E ++ V+ GLYP + + + GK +S
Sbjct: 1012 IYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNS 1071
Query: 647 SLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVN-SVFLKDSTAVSD-SVLLLFGG 704
+ G + L+ +++N + + WL + +K N SVF++DS+ V +VLLL G
Sbjct: 1072 VTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDG 1131
Query: 705 SI 706
+
Sbjct: 1132 DV 1133
>sp|Q7L2E3|DHX30_HUMAN Putative ATP-dependent RNA helicase DHX30 OS=Homo sapiens GN=DHX30
PE=1 SV=1
Length = 1194
Score = 503 bits (1296), Expect = e-141, Method: Compositional matrix adjust.
Identities = 296/722 (40%), Positives = 414/722 (57%), Gaps = 69/722 (9%)
Query: 7 NLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPR 66
LP ++ +L AI Q+ VV+ISG+TGCGKTT++PQ +LE +T RGA C++I TQPR
Sbjct: 433 QLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 492
Query: 67 RISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKG 125
RISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+G
Sbjct: 493 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEG 552
Query: 126 VTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIP 185
V+HVIVDEVHER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +P
Sbjct: 553 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 612
Query: 186 GFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVEDTLK 245
GF YPV+ H+LEDI + K+ K R S E
Sbjct: 613 GFMYPVKEHYLEDI---------------------LAKLGKHQYLHRHRHHESEDE---- 647
Query: 246 AANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDK 305
C + +L+ ++ +I + PG +L F+ GW +I + +
Sbjct: 648 ----------------C----ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQR 687
Query: 306 LQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFV 365
LQ + + ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETSITIND+V V
Sbjct: 688 LQEALGMHE-SKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHV 746
Query: 366 IDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCVYDAFAEY 425
+D G KE YD SCL W+S + QRRGRAGR Q G Y L+PR + +
Sbjct: 747 VDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPF 806
Query: 426 QLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEE 484
Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ IG LD E
Sbjct: 807 QVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREY 866
Query: 485 LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK 544
LT LGQ LA + +P+L K ++L AIF CL P+L +V+ L+ RDPF + + + + K
Sbjct: 867 LTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVK 925
Query: 545 SQFSHDY-SDHLALVRAFEGWKDAERGL---AGYEYCWKNFLSAPSMKVIDSLRKEFLSL 600
+ SHD SDHLA VRA GW++ R + Y +N L APS++ I L K+F
Sbjct: 926 ALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSEN 985
Query: 601 LKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGI-----SSIVQNGK---SS 646
+ + LV DC ++ CN + +E ++ V+ GLYP + + + GK +S
Sbjct: 986 IYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNS 1045
Query: 647 SLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVN-SVFLKDSTAVSD-SVLLLFGG 704
+ G + L+ +++N + + WL + +K N SVF++DS+ V +VLLL G
Sbjct: 1046 VTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDG 1105
Query: 705 SI 706
+
Sbjct: 1106 DV 1107
>sp|Q5R607|DHX30_PONAB Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30
PE=2 SV=1
Length = 1194
Score = 503 bits (1295), Expect = e-141, Method: Compositional matrix adjust.
Identities = 296/722 (40%), Positives = 413/722 (57%), Gaps = 69/722 (9%)
Query: 7 NLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPR 66
LP ++ +L AI Q+ VV+ISG+TGCGKTT++PQ +LE +T RGA C++I TQPR
Sbjct: 433 QLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 492
Query: 67 RISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKG 125
RISA+SV++RV+ E G L +VG++VRLE R LLFCT GILLR+L + +L+G
Sbjct: 493 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 552
Query: 126 VTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIP 185
V+HVIVDEVHER +N DFLLI+LK L P LRLVLMSAT D E FS YFGG VI +P
Sbjct: 553 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 612
Query: 186 GFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVEDTLK 245
GF YPV+ H+LEDI + K+ K R S E
Sbjct: 613 GFMYPVKEHYLEDI---------------------LAKLGKHQYLHRHRHHESEDE---- 647
Query: 246 AANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDK 305
C + +L+ ++ +I + PG +L F+ GW +I + +
Sbjct: 648 ----------------C----ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQR 687
Query: 306 LQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFV 365
LQ + + ++ L+L H ++ +Q+ IF +P GVRKIVLATNIAETS TIND+V V
Sbjct: 688 LQEALGMHE-SKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHV 746
Query: 366 IDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCVYDAFAEY 425
+D G KE YD SCL W+S + QRRGRAGR Q G Y L+PR + +
Sbjct: 747 VDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPF 806
Query: 426 QLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEE 484
Q+PEILRTPL++L LQ K + T FLS+A+ SP + AV A+ L+ IG LD E
Sbjct: 807 QVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREY 866
Query: 485 LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK 544
LT LGQ LA + EP+L K ++L AIF CL P+L +V+ L+ RDPF + + + + K
Sbjct: 867 LTTLGQRLAHISTEPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVK 925
Query: 545 SQFSHDY-SDHLALVRAFEGWKDAERGL---AGYEYCWKNFLSAPSMKVIDSLRKEFLSL 600
+ SHD SDHLA VRA GW++ R + Y +N L APS++ I L K+F
Sbjct: 926 ALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSEN 985
Query: 601 LKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGI-----SSIVQNGK---SS 646
+ + LV DC ++ CN + +E ++ V+ GLYP + + + GK +S
Sbjct: 986 IYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNS 1045
Query: 647 SLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVN-SVFLKDSTAVSD-SVLLLFGG 704
+ G + L+ +++N + + WL + +K N SVF++DS+ V +VLLL G
Sbjct: 1046 VTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDG 1105
Query: 705 SI 706
+
Sbjct: 1106 DV 1107
>sp|Q5ZI74|DHX30_CHICK Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30
PE=2 SV=1
Length = 1231
Score = 496 bits (1277), Expect = e-139, Method: Compositional matrix adjust.
Identities = 293/728 (40%), Positives = 415/728 (57%), Gaps = 71/728 (9%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP K+ +L+AI QN VV+I+G+TGCGKTT++PQ +LE I RGA C+++ TQPRR
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRR 537
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMK-GRDTRLLFCTTGILLRRLLVDRNLKGV 126
ISA+SV++RVA E G + ++VGY+VRLE R LLFCT GILLR+L + +L+GV
Sbjct: 538 ISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGV 597
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINIPG 186
+HV+VDEVHER +N DFLLI+LK + P+LRLVLMSAT D + FS YFGG V+ +PG
Sbjct: 598 SHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCPVVKVPG 657
Query: 187 FTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVEDTLKA 246
F YPV+ ++LE+IL G R R +I + ++ +
Sbjct: 658 FMYPVKEYYLEEILAKLGRH-----------------------RHRHYEIKQSDDECV-- 692
Query: 247 ANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLNDKL 306
+ +LI ++ I PG +L F+ GW +I + +L
Sbjct: 693 ---------------------LDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRL 731
Query: 307 QANRILGDP-TRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVFV 365
+LG +R L+L H ++ +Q+ IF P GVRKIVLATNIAETSITIND+V V
Sbjct: 732 L--EMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHV 789
Query: 366 IDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCVYDAFAEY 425
+D G KE YD SCL W+S + QRRGRAGR Q G Y L+PR D Y
Sbjct: 790 VDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTY 849
Query: 426 QLPEILRTPLQSLCLQIK-SLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEE 484
Q+PEILRTPL++L +Q K + T FLS+AL SP++ AV A+ L+ IG LD E
Sbjct: 850 QVPEILRTPLENLVVQAKIHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREA 909
Query: 485 LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK 544
LT LG+ LA + +P+L K ++L +I+ CL P+L IV+ L+ RDPF + + + + AK
Sbjct: 910 LTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLT-RDPFSSSLQNRAEVDKAK 968
Query: 545 SQFSHDY-SDHLALVRAFEGWKDAER---GLAGYEYCWKNFLSAPSMKVIDSLRKEFLSL 600
+ S + SDHLA VRA GW++ R A Y +L PS++ I+ L K+F
Sbjct: 969 AVLSRESGSDHLAFVRAVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSEN 1028
Query: 601 LKDTGLV----DCD--TSICNAWGRDERFIRAVICYGLYPGI-----SSIVQNGK---SS 646
L + LV DC +S+CN + +E ++ V+ GLYP + + + GK +S
Sbjct: 1029 LYEAFLVSSPSDCTMPSSVCNQYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNS 1088
Query: 647 SLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVN-SVFLKDSTAVSDSVLLLFGGS 705
+ G V L+ +++N S++ WL + +K N VF++DS+ V +LL +
Sbjct: 1089 YAYRTKAGTVLLHKSTINREASKLYSRWLTYFMAVKSNGGVFVRDSSQVHPLAVLLMTDT 1148
Query: 706 ISQGEIDG 713
DG
Sbjct: 1149 DIHVRDDG 1156
>sp|Q28141|DHX9_BOVIN ATP-dependent RNA helicase A OS=Bos taurus GN=DHX9 PE=2 SV=1
Length = 1287
Score = 493 bits (1269), Expect = e-138, Method: Compositional matrix adjust.
Identities = 292/761 (38%), Positives = 436/761 (57%), Gaps = 46/761 (6%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP K ++ +L AISQN VVII G TGCGKTTQVPQFIL+ I + R A C+I
Sbjct: 378 VLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECNI 437
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLV 119
+ TQPRRISA+SV+ERVA ERGE+ G+S GY VR E + R ++FCT G+LLR+L
Sbjct: 438 VVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 495
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGA 179
+ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 496 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 555
Query: 180 TVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASA 239
+I + G T+PV+ +FLED + MT + + P P+ +K +
Sbjct: 556 PIIEVYGRTFPVQEYFLEDCIQMTHF-VPP-------------------PKDKKKKDKDD 595
Query: 240 VEDTLKAANFN-----EYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMT 294
AN N EY ++TR S++ N F LIE +L YI PGAVLVF+
Sbjct: 596 DGGEDDDANCNLICGDEYGAETRISMAQLNEKETPFELIEALLLYIETLNVPGAVLVFLP 655
Query: 295 GWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAE 354
GW+ I ++ L+ N G R +L H + EQR +FD SGV KI+L+TNIAE
Sbjct: 656 GWNLIYTMQKHLEMNPHFGS-HRYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAE 714
Query: 355 TSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLY 414
TSITINDVV+VID K K + A NN + W S + +QR+GRAGRV+PG C+ L
Sbjct: 715 TSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLC 774
Query: 415 PRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLK 474
R ++ + PE+ RTPL + L IK LRLG I FL++A++ P L AV A L+
Sbjct: 775 SRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLR 834
Query: 475 IIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPM 534
+ ALD N+ELT LG+ LA LP+EP+ GKM+I+G IF + + TI A +PF++
Sbjct: 835 ELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPFIS-- 892
Query: 535 DKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERG--LAGYEYCWKNFLSAPSMKVIDS 592
+ K L ++ + +SDH+AL+ F+ W DA G A +C L+ ++++
Sbjct: 893 EGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWE 952
Query: 593 LRKEFLSLLKDTGLVD--CDTSICNAWGRDERF--IRAVICYGLYPGISSIVQNGKSSSL 648
+ + +L ++G + T + G D + +++ +G+YP ++ + + +
Sbjct: 953 AKVQLKEILINSGFPEECLLTQVFTNTGPDNNLDVVISLLAFGVYP---NVCYHKEKRKI 1009
Query: 649 KTMEDGQVFLYSNSVN----ARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGG 704
T E ++ +SVN +++ + P P+ VF EK++ ++ K T V+ LLLF
Sbjct: 1010 LTTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFAS 1069
Query: 705 SISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELI 745
Q DG L ++ ++ ++ A +R ++ L+
Sbjct: 1070 KKVQS--DGQLVLVDDWIRLQISHEAAACITALRAAMEALV 1108
>sp|Q08211|DHX9_HUMAN ATP-dependent RNA helicase A OS=Homo sapiens GN=DHX9 PE=1 SV=4
Length = 1270
Score = 492 bits (1267), Expect = e-138, Method: Compositional matrix adjust.
Identities = 293/761 (38%), Positives = 435/761 (57%), Gaps = 46/761 (6%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP K ++ +L AISQN VVII G TGCGKTTQVPQFIL+ I + R A C+I
Sbjct: 381 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 440
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLV 119
+ TQPRRISA+SV+ERVA ERGE+ G+S GY VR E + R ++FCT G+LLR+L
Sbjct: 441 VVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 498
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGA 179
+ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 499 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 558
Query: 180 TVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASA 239
+I + G TYPV+ +FLED + MT + + P P+ +K +
Sbjct: 559 PIIEVYGRTYPVQEYFLEDCIQMTHF-VPP-------------------PKDKKKKDKDD 598
Query: 240 VEDTLKAANFN-----EYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMT 294
AN N EY +TR S+S N F LIE +L YI PGAVLVF+
Sbjct: 599 DGGEDDDANCNLICGDEYGPETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLP 658
Query: 295 GWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAE 354
GW+ I ++ L+ N G R +L H + EQR +FD GV K++L+TNIAE
Sbjct: 659 GWNLIYTMQKHLEMNPHFGS-HRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAE 717
Query: 355 TSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLY 414
TSITINDVV+VID K K + A NN + W S + +QR+GRAGRV+PG C+ L
Sbjct: 718 TSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLC 777
Query: 415 PRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLK 474
R ++ + PE+ RTPL + L IK LRLG I FL++A++ P L AV A L+
Sbjct: 778 SRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLR 837
Query: 475 IIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPM 534
+ ALD N+ELT LG+ LA LP+EP+ GKM+I+G IF + + TI A +PF+
Sbjct: 838 ELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFIN-- 895
Query: 535 DKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERG--LAGYEYCWKNFLSAPSMKVIDS 592
+ K L ++ + +SDH+AL+ F+ W DA G A +C L+ ++++
Sbjct: 896 EGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWE 955
Query: 593 LRKEFLSLLKDTGLV-DC-DTSICNAWGRDERF--IRAVICYGLYPGISSIVQNGKSSSL 648
+ + +L ++G DC T + G D + +++ +G+YP ++ + + +
Sbjct: 956 AKVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYP---NVCYHKEKRKI 1012
Query: 649 KTMEDGQVFLYSNSVN----ARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGG 704
T E ++ +SVN +++ + P P+ VF EK++ ++ K T V+ LLLF
Sbjct: 1013 LTTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFAS 1072
Query: 705 SISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELI 745
Q DG + ++ +++ ++ A +R ++ L+
Sbjct: 1073 KKVQS--DGQIVLVDDWIKLQISHEAAACITGLRAAMEALV 1111
>sp|Q5R874|DHX9_PONAB ATP-dependent RNA helicase A OS=Pongo abelii GN=DHX9 PE=2 SV=1
Length = 1269
Score = 492 bits (1267), Expect = e-138, Method: Compositional matrix adjust.
Identities = 293/761 (38%), Positives = 435/761 (57%), Gaps = 46/761 (6%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP K ++ +L AISQN VVII G TGCGKTTQVPQFIL+ I + R A C+I
Sbjct: 381 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 440
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLV 119
+ TQPRRISA+SV+ERVA ERGE+ G+S GY VR E + R ++FCT G+LLR+L
Sbjct: 441 VVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 498
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGA 179
+ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 499 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 558
Query: 180 TVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASA 239
+I + G TYPV+ +FLED + MT + + P P+ +K +
Sbjct: 559 PIIEVYGRTYPVQEYFLEDCIQMTHF-VPP-------------------PKDKKKKDKDD 598
Query: 240 VEDTLKAANFN-----EYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMT 294
AN N EY +TR S+S N F LIE +L YI PGAVLVF+
Sbjct: 599 DGGEDDDANCNLICGDEYGPETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLP 658
Query: 295 GWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAE 354
GW+ I ++ L+ N G R +L H + EQR +FD GV K++L+TNIAE
Sbjct: 659 GWNLIYTMQKHLEMNPHFGS-HRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAE 717
Query: 355 TSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLY 414
TSITINDVV+VID K K + A NN + W S + +QR+GRAGRV+PG C+ L
Sbjct: 718 TSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLC 777
Query: 415 PRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLK 474
R ++ + PE+ RTPL + L IK LRLG I FL++A++ P L AV A L+
Sbjct: 778 SRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLR 837
Query: 475 IIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPM 534
+ ALD N+ELT LG+ LA LP+EP+ GKM+I+G IF + + TI A +PF+
Sbjct: 838 ELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFIN-- 895
Query: 535 DKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERG--LAGYEYCWKNFLSAPSMKVIDS 592
+ K L ++ + +SDH+AL+ F+ W DA G A +C L+ ++++
Sbjct: 896 EGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWE 955
Query: 593 LRKEFLSLLKDTGLV-DC-DTSICNAWGRDERF--IRAVICYGLYPGISSIVQNGKSSSL 648
+ + +L ++G DC T + G D + +++ +G+YP ++ + + +
Sbjct: 956 AKVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYP---NVCYHKEKRKI 1012
Query: 649 KTMEDGQVFLYSNSVN----ARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGG 704
T E ++ +SVN +++ + P P+ VF EK++ ++ K T V+ LLLF
Sbjct: 1013 LTTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFAS 1072
Query: 705 SISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELI 745
Q DG + ++ +++ ++ A +R ++ L+
Sbjct: 1073 KKVQS--DGQIVLVDDWIKLQISHEAAACITGLRAAMEALV 1111
>sp|P24785|MLE_DROME Dosage compensation regulator OS=Drosophila melanogaster GN=mle PE=2
SV=2
Length = 1293
Score = 491 bits (1265), Expect = e-138, Method: Compositional matrix adjust.
Identities = 314/809 (38%), Positives = 459/809 (56%), Gaps = 72/809 (8%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
LEFR LP ++ +LTAI+ N VVII G TGCGKTTQ+ Q+IL+ I S +G +I
Sbjct: 377 FLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYANI 436
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRD-TRLLFCTTGILLRRLLV 119
TQPRRISA+SV+ERVA ER E+LG++VGY VR E + R +LFCT G+LLR+L
Sbjct: 437 YVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKL-- 494
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGA 179
+ L+GV+H+IVDE+HER +N DFLL++L+D++ P+L ++LMSAT+D FS YFG
Sbjct: 495 EAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGIC 554
Query: 180 TVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKS----- 234
V+ +PG +PV+ FLEDI+ MT + P S ++ RKRK
Sbjct: 555 PVLEVPGRAFPVQQFFLEDIIQMTDF--VP---------------SAESRRKRKEVEDEE 597
Query: 235 QIASAVEDTLKAANFNE-----YSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAV 289
Q+ S +D + N+N+ YS +TR +++ + + F L+E +L +I K PGA+
Sbjct: 598 QLLSEDKDEAEI-NYNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAI 656
Query: 290 LVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLA 349
LVF+ GW+ I +L LQ I GD ++ +L CH + EQR +F+ GV KI+L+
Sbjct: 657 LVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILS 716
Query: 350 TNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGE 409
TNIAETSITI+D+VFVID KA+ + + NN + W S + +QR+GRAGRV+PG
Sbjct: 717 TNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGF 776
Query: 410 CYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNA 469
C+ L R + A + PE+ RTPL + L IK LRLG+I FLS+AL+ P + AV A
Sbjct: 777 CFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVIEA 836
Query: 470 IEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLS--VR 527
L+ + LD N+ELT LG+ LA LP+EP+LGKM++LGA+F C + ++ I+A S
Sbjct: 837 EVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCAD-LMAIMASYSSTFS 895
Query: 528 DPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGW-KDAERG-LAGYEYC-WKNFLSA 584
+ F + ++ LA K+ SDH+A++ A + W ++ +RG +C WK L
Sbjct: 896 EVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKG-LQM 954
Query: 585 PSMKVIDSLRKEFLSLLKDTGL-------------VDCDTSICNAWGRDERFIRAVICYG 631
+M VI +++ L LL+ G +D D + + A++C G
Sbjct: 955 STMNVIWDAKQQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDV-------SLALLCLG 1007
Query: 632 LYPGISSIVQNGKSSSLKTMEDGQVFLYSNSVNARESEI--PYPWLVFNEKMKVNSVFLK 689
LYP I V K L T E L+ SVN + PYP+ VF EK++ +V K
Sbjct: 1008 LYPNIC--VHKEKRKVL-TTESKAALLHKTSVNCSNLAVTFPYPFFVFGEKIRTRAVSCK 1064
Query: 690 DSTAVSDSVLLLFGGSISQGEID---GHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQ 746
+ VS ++LFG +ID ++ + +L F + P +A ++ L++LI
Sbjct: 1065 QLSMVSPLQVILFGSR----KIDLAANNIVRVDNWLNFDIEPELAAKIGALKPALEDLIT 1120
Query: 747 NKLLNPRLNIHTHEDLLAAVRLLVAEDQC 775
NP + E V+ V +D C
Sbjct: 1121 VACDNPSDILRLEEPYAQLVK--VVKDLC 1147
>sp|Q68FK8|DHX9_XENLA ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9
PE=2 SV=1
Length = 1262
Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust.
Identities = 291/829 (35%), Positives = 452/829 (54%), Gaps = 55/829 (6%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R +LP K + ++ A+ + VVII G TGCGKTTQVPQ+IL+ I + R A C+I+ TQ
Sbjct: 387 RESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQ 446
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLVDRNL 123
PRRISA+SV+ERVA ERGE++G+S GY VR E + R +LFCT G+LLR+L + +
Sbjct: 447 PRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRKL--ESGI 504
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVIN 183
+G++HVIVDE+HER +N DFLL+VL+D++ PE+R++LMSAT+D +F YF +I
Sbjct: 505 RGISHVIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPIIE 564
Query: 184 IPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVEDT 243
+ G T+PV+ ++LED + MT + + P PR +K +
Sbjct: 565 VFGRTFPVQEYYLEDCIQMTQF-IPP-------------------PRDKKKKDKDEEGGD 604
Query: 244 LKAANFN-----EYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDD 298
+ N N +Y +TR S+S + LIE +L YI PGAVLVF+ GW+
Sbjct: 605 DEETNCNLVCGDDYGPETRRSMSQLSEKETPLELIEALLKYIETLNVPGAVLVFLPGWNL 664
Query: 299 INSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSIT 358
I ++ L+ N G + +L H + EQR +FD G+ K++L+TNIAETSIT
Sbjct: 665 IYAMQKHLEMNPHFGSHS-YCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSIT 723
Query: 359 INDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCV 418
INDVV+VID K K + + NN + W S + +QR+GRAGRV+PG C+ L +
Sbjct: 724 INDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKAR 783
Query: 419 YDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGA 478
+D + PEI RTPL + L IK LRLG I FLS+A++ P L AV A L+ + A
Sbjct: 784 FDKLETHLTPEIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRELDA 843
Query: 479 LDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKD 538
LD N+ELT LG+ LA LP+EP+LGKM+I+G IF + + TI A +PF++ + +
Sbjct: 844 LDSNDELTPLGRILAKLPIEPRLGKMMIIGCIFYVGDALCTISAATCFPEPFIS--EGRR 901
Query: 539 LAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYE--YCWKNFLSAPSMKVIDSLRKE 596
L ++ + +SDH+AL+ F+ W DA G E +C L+ ++++ + +
Sbjct: 902 LGYVHRNFAGNRFSDHVALLSVFQAWDDARMGGEDAETRFCEHKRLNMATLRMTWEAKVQ 961
Query: 597 FLSLLKDTGLVD--CDTSICNAWGRDERF--IRAVICYGLYPGISSIVQNGKSSSLKTME 652
+L + G + + N G D + +++ +G+YP ++ + + + T E
Sbjct: 962 LKDILVNAGFPEECLMNQVFNNTGPDNNLDVVISLLAFGVYP---NVCYHKEKRKILTTE 1018
Query: 653 DGQVFLYSNSVNA----RESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGSISQ 708
++ +SVN ++ + P P+ VF+EK++ ++ K T VS LLLF
Sbjct: 1019 GRNALIHKSSVNCPFSNQDLKYPSPFFVFSEKIRTRAISAKGMTMVSPLQLLLFASKKVM 1078
Query: 709 GEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPRLNIH---THEDLLAA 765
DG + +++ M + +R L+ L+ P + +E +L
Sbjct: 1079 S--DGEFIHLDDWIKLSMAHEESACITALRAALEALVVEVTKEPEILSQLDPVNEKMLNM 1136
Query: 766 VRLLVAEDQCEGRFIFGHQVFKPSKPSVVGAQPAFISRTESGPGGDNSK 814
+R++ + G+ F G +P ++R +SG G+ +
Sbjct: 1137 IRVISKPSTAGISLVMGNSRFGD------GPRPPKMARFDSGFQGNRGR 1179
>sp|O70133|DHX9_MOUSE ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1 SV=2
Length = 1380
Score = 468 bits (1203), Expect = e-130, Method: Compositional matrix adjust.
Identities = 286/740 (38%), Positives = 426/740 (57%), Gaps = 50/740 (6%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+L+ R LP K + +L AIS N VVII G TGCGKTTQVPQ+IL+ I + R A C+I
Sbjct: 383 VLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNI 442
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLV 119
+ TQPRRISA++V+ERVA ERGE+ G+S GY VR E + R ++FCT G+LLR+L
Sbjct: 443 VVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 500
Query: 120 DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGA 179
+ ++G++HVIVDE+HER +N DFLL+VL+D++ PE+R+VLMSAT+D +F YF
Sbjct: 501 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNC 560
Query: 180 TVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASA 239
+I + G T+PV+ +FLED + MT + + P P+ +K +
Sbjct: 561 PIIEVYGRTFPVQEYFLEDCIQMTQF-IPP-------------------PKDKKKKDKED 600
Query: 240 VEDTLKAANFN-----EYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMT 294
AN N EY +T+ S+S N F LIE +L YI PGAVLVF+
Sbjct: 601 DGGEDDDANCNLICGDEYGPETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLP 660
Query: 295 GWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAE 354
GW+ I ++ L+ N G R +L H + EQR +FD GV K++L+TNIAE
Sbjct: 661 GWNLIYTMQKHLENNSHFGS-HRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAE 719
Query: 355 TSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLY 414
TSITINDVV+VID K K + A NN + W S + +QR+GRAGRV+PG C+ L
Sbjct: 720 TSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLC 779
Query: 415 PRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLK 474
R +D + PE+ RTPL + L IK LRLG I FL++A++ P L A+ A L+
Sbjct: 780 SRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAIIEAEHTLR 839
Query: 475 IIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPM 534
+ ALD N+ELT LG+ LA LP+EP+ GKM+I+G IF + V TI A +PF++
Sbjct: 840 ELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFIS-- 897
Query: 535 DKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYE----YCWKNFLSAPSMKVI 590
+ K L ++ + +SDH+AL+ F+ W DA ++G E +C + L+ ++++
Sbjct: 898 EGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDAR--MSGEEAEIRFCEQKRLNMATLRMT 955
Query: 591 DSLRKEFLSLLKDTGLV-DC-DTSICNAWGRDERF--IRAVICYGLYPGISSIVQNGKSS 646
+ + +L ++G DC T + G D + +++ +G+YP ++ + +
Sbjct: 956 WEAKVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYP---NVCYHKEKR 1012
Query: 647 SLKTMEDGQVFLYSNSVN----ARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLF 702
+ T E ++ +SVN +++ + P P+ VF EK++ ++ K T V+ LLLF
Sbjct: 1013 KILTTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLF 1072
Query: 703 GGSISQGEIDGHLKMMGGYL 722
Q DG + + ++
Sbjct: 1073 ASKKVQS--DGQIVFIDDWI 1090
>sp|P0C7L7|YUM14_USTMA Putative DEAH-box ATP-dependent helicase UM11114 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=UM04112 PE=3 SV=1
Length = 1567
Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust.
Identities = 310/828 (37%), Positives = 467/828 (56%), Gaps = 90/828 (10%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
M E RR+LPA +L I N+VVII+GETGCGKTTQVPQFIL+ I + RG+ C+I
Sbjct: 729 MDETRRSLPAASAAREILGLIRSNRVVIIAGETGCGKTTQVPQFILDEAIEAGRGSECNI 788
Query: 61 ICTQPRRISAMSVSERVASERGEKL---------GESVGYKVRLEGMKGRDTRLLFCTTG 111
+ TQPRR+SA+ V+ RVA ERGEKL G VGY +R E R+ RLLF TTG
Sbjct: 789 VVTQPRRVSAIGVASRVAVERGEKLDGKKKAVAPGSLVGYAIRGERRASRECRLLFTTTG 848
Query: 112 ILLRRLLV--DRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDA 169
+LLRRL D +LKG++HV+VDEVHER ++ DFLL+ L++LL R +++VLMSAT++
Sbjct: 849 VLLRRLGAGGDTDLKGISHVVVDEVHERNVDSDFLLLELRELLRRNSRIKVVLMSATINQ 908
Query: 170 ELFSSYFGGATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAP 229
E F+SYFG A I+IPG T+ V H+LEDI+ +G+R + G E W+ S +
Sbjct: 909 ETFASYFGKAPCISIPGRTFAVEDHYLEDIVQQSGFRPS--------GNE--WRGSARGG 958
Query: 230 RKRKSQIASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKER---- 285
++ + +I + L+A +E + + ESLS + I + L+ V+ Y+ E+
Sbjct: 959 KQIEQEIGQ-LRAHLQAQGVDEETCKAVESLSR-SGGRISYELLGAVVRYVVERAENEEL 1016
Query: 286 --------PGAVLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFD 337
GA+LVF G +I D + + + G ++V +L H ++++ EQR +F
Sbjct: 1017 SGAADGDVGGAILVFCPGVGEIRQAIDAITTS-VRGQ-SKVEILPLHANLSADEQRRVFQ 1074
Query: 338 EPESGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQ 397
+G RKIV++TN+AETSITI DV +V+D G+ KET ++ + + L+ W S + +Q
Sbjct: 1075 PVGAGRRKIVVSTNVAETSITIPDVSYVVDTGRVKETRFEPESGLTRLVECWASRAACKQ 1134
Query: 398 RRGRAGRVQPGECYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLG-TIAGFLS 455
RRGRAGRV+ GEC+RLY R V + A Q PE+ R PL+SL L++KS+R + +L+
Sbjct: 1135 RRGRAGRVRAGECFRLYSRYVDEKKMAAQQTPEMRRVPLESLFLEVKSMREDEDVKEYLN 1194
Query: 456 RALQSPELLAVQNAIEYLKIIGALD----HNEELTVLGQYLAMLPMEPKLGKMLILGAIF 511
+AL P L ++ A+ L GAL + LT LG++LA LP++ +L K+LI+G IF
Sbjct: 1195 KALDPPSLASMDAALTNLIEAGALQSDRGYKSRLTSLGKHLAQLPLDLRLAKLLIMGTIF 1254
Query: 512 NCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHD--YSDHLALVRAFEGWKD--A 567
CL P+LT+ + +S + F P +K++ A A++ F+ SD LA AFE W+ A
Sbjct: 1255 GCLGPMLTVASIMSCKPLFNTPFEKREEASKARASFAAAGCRSDLLADAAAFEEWQTMRA 1314
Query: 568 ERGLAG--YEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERF-- 623
+R G E+C +F+S S++ I + R + LS L++ G V D S + DER+
Sbjct: 1315 QRKTNGEIREWCESHFISQSSLRDIQTNRLDLLSHLQEMGFVAPDYSAFGVYD-DERYDM 1373
Query: 624 -------IRAVICYGLYPGISSI-VQNGK--SSSLKTME-------------DGQVFLYS 660
+R+VI GL+P + I V + K SS T++ +G+VFL+
Sbjct: 1374 NAQHAGVLRSVILAGLWPAVVRIDVPSAKFDQSSSGTVQREAEARQVKYFDRNGRVFLHP 1433
Query: 661 NSVNARESEIPYPWLVFNEKMKVNS-----VFLKDSTAVSDSVLLLFGGSISQGEIDGHL 715
+S +L K + V+L+D+T V LLLFGG + G +
Sbjct: 1434 SSTLFSCKGFESSYLTTFAKSSTGAGADSKVYLRDATEVPLFALLLFGGKLKINHFAGGI 1493
Query: 716 KM----MGG------YLEFFMNPSVADMYQCIRRELDELIQNKLLNPR 753
+ GG ++ N + + +RR LD ++ + + P+
Sbjct: 1494 GIGSNQSGGDAKDENWVRLRANARIGVLCAQLRRLLDAVLDHAIDEPQ 1541
>sp|Q22307|DHX9_CAEEL Probable ATP-dependent RNA helicase A OS=Caenorhabditis elegans
GN=rha-1 PE=2 SV=3
Length = 1301
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 290/875 (33%), Positives = 463/875 (52%), Gaps = 64/875 (7%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP + + ++ +++N+V +I GETGCGK+TQV QF+LES + + GA + + +Q
Sbjct: 378 RGELPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLESFLENSNGASFNAVVSQ 437
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRD-TRLLFCTTGILLRRLLVDRNL 123
PRRISA+S++ERVA+ERGE++GE+ GY VR + R ++FCT G+LLR +++ L
Sbjct: 438 PRRISAISLAERVANERGEEVGETCGYNVRFDSATPRPYGSIMFCTVGVLLR--MMENGL 495
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYF------G 177
+G++HVI+DE+HER ++ DF+LIVL++++S +LR+VLMSAT+D +LF+++F G
Sbjct: 496 RGISHVIIDEIHERDVDTDFVLIVLREMISTYRDLRVVLMSATIDTDLFTNFFSSIPDVG 555
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
VI + G T+PV++ +LEDIL + + +E K K+
Sbjct: 556 PTPVITMHGRTFPVQSFYLEDIL----------HNLQHMPEEPDQKKRKKGGPPPPDDDE 605
Query: 238 SAVEDTLKAANFN-----EYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVF 292
E K N N + + ++S + I F +IE +L I + GAVLVF
Sbjct: 606 GDEEVDDKGRNMNILTDPSINESLKTAMSRISEKDIPFGVIEAILNDIASRGVDGAVLVF 665
Query: 293 MTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNI 352
+ GW +I +L ++L ++ G + +L H + S EQR +F+ G RKI+++TNI
Sbjct: 666 LPGWAEIMTLCNRLLEHQEFGQANKYEILPLHSQLTSQEQRKVFNH-YPGKRKIIVSTNI 724
Query: 353 AETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYR 412
AETSITI+DVV+VID KAKE Y + NN W S + QRRGRAGRV+ G +
Sbjct: 725 AETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGRVRAGYAFH 784
Query: 413 LYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEY 472
L + ++A ++ E+LR PL + L IK LRLG++ FL +ALQ P V +
Sbjct: 785 LCSKMRFEALDDHGTAEMLRIPLHQIALTIKLLRLGSVGEFLGKALQPPPYDMVVESEAV 844
Query: 473 LKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLA 532
L+ +GALD N ELT LG+ LA +P+EP + K+LILG + + + +S PF+
Sbjct: 845 LQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVASAMSFPTPFVP 904
Query: 533 PMDKKDLAEAAKSQFS-HDYSDHLALVRAFEGWKDAER---GLAGYEYCWKNFLSAPSMK 588
+ +F+ + +SDH+A+V +G+++A + A E+C + LS P +K
Sbjct: 905 REKHHSRLSGTQRKFAGNKFSDHVAIVSVIQGYREAVQMGASAAEREFCERYSLSNPVLK 964
Query: 589 VIDSLRKEFLSLLKDTG------LVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQN 642
+ D R++ + +L++ L D ++ N R+ +R+++ LYP ++ V
Sbjct: 965 MTDGARRQLIDVLRNQCSFPEDILFDISVNV-NGPDRELNLMRSLLVMALYPNVAYYV-- 1021
Query: 643 GKSSSLKTMEDGQVFLYSNSV-----NARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDS 697
GK L T+E + S+ N +E + P P LVF EK++ + K + +S
Sbjct: 1022 GKRKVL-TIEQSSALINKYSMLVPMNNRQEMDFPSPLLVFTEKVRTRCISCKQMSVISAI 1080
Query: 698 VLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNPRLNIH 757
LL+FG + +G ++ + + MN S A +R ++ L+ NP
Sbjct: 1081 QLLVFGSRKVECVGEGLVR-IDETITIRMNVSTAAALIGLRPCIEALLVKSCENP----- 1134
Query: 758 THEDLLAAVRLLVAEDQCEGRFIFGHQVFK---PSKPSVV--------GAQPAFISRTES 806
+ LA + AE + R I + P K S++ G P + +
Sbjct: 1135 ---ESLAGLNPSDAELRQLLRDISSEEFMSEAGPIKDSLLTDNALIQKGPAPNRLEYADW 1191
Query: 807 GPGGDNSKSQLQTLLTRAGYAAPSYRTKQLKNGQF 841
GP +NS Q Q AG YR + N +
Sbjct: 1192 GPSNNNSSFQNQDFPPAAGGKVHPYRGNRRGNHPY 1226
>sp|O60114|YG65_SCHPO Uncharacterized helicase C15C4.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC15C4.05 PE=3 SV=1
Length = 1428
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 265/799 (33%), Positives = 423/799 (52%), Gaps = 63/799 (7%)
Query: 4 FRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICT 63
FR LPA + ++ A++ +Q++IISG+TGCGK+TQ+P F+LE+ ++ G I T
Sbjct: 627 FRNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLEN--STKNGKAVKIYVT 684
Query: 64 QPRRISAMSVSERVASERG-----EKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLL 118
+PRRISA+S++ RV+ E G + E VGY VRL+ T L + TTG LR L
Sbjct: 685 EPRRISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTPLTPLTYVTTGTFLRLLE 744
Query: 119 VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG 178
V ++ VTH+I+DEVHER ++ D LLI + LL + P L++++MSATL+AE F YF G
Sbjct: 745 VGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATLNAEKFQLYFEG 804
Query: 179 ATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIAS 238
+ +I IPG TYPV +LEDIL G + N GQ+ + + + ++ S
Sbjct: 805 SNLITIPGKTYPVHRFYLEDILSQFGNDKSFGNAA---GQDVIEEDDYETDQQDASISNK 861
Query: 239 AVEDTLKAANFNEYSSQTRESLSCW-NPDCIGFNLIEYVLCYICEKERP---GAVLVFMT 294
+ ED + N + W N I + LI Y+L YI + P VLVF+
Sbjct: 862 SAEDAIVEMNL----------IPAWYNEKAINYGLIVYLLKYIFTEGDPKFSKCVLVFLP 911
Query: 295 GWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAE 354
G +I + ++ + + + + H +++S++Q+ +F+ P G RKIVL+TNIAE
Sbjct: 912 GISEILRVKSLIEDMPMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKGCRKIVLSTNIAE 971
Query: 355 TSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLY 414
T +TI DV VID G +E Y++ + S L +++S +A+QR GRAGRVQ G CY L+
Sbjct: 972 TGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQEGICYHLF 1031
Query: 415 PRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
+ +D F YQ PEILR LQ + L++K ++G + L +AL P + A+E L
Sbjct: 1032 SKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVLGKALDPPSSTNIIRALEKL 1091
Query: 474 KIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAP 533
+GAL NE+LT LG++L+ LP++ LGK+L+LG + C++ +IVA L++ PF
Sbjct: 1092 HQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAMLTIGSPFRKS 1151
Query: 534 MDKKDLAEAAKSQFSHD--YSDHLALVRAFEGWKD---AERGLAGYEYCWKNFLSAPSMK 588
+D + A A+ F+ + SD + + A+ W++ + G + + +L+ ++
Sbjct: 1152 VDNEFSANKARLSFAKENTRSDLVLMYYAYCAWREICLSPLGPDEDSFAKEKYLNLEALS 1211
Query: 589 VIDSLRKEFLSLLKDTGLV---DCDT------SICNAWGR----------DERFIRAVIC 629
+ +SL+ + LS LKD L+ D DT SIC + + + VI
Sbjct: 1212 MTESLKIQLLSELKDMKLLGASDVDTCKSLKRSICRRFAVIPKEHDINSGNAEILCGVIA 1271
Query: 630 YGLYPGISSI-VQNGKSSSLKTMEDGQVFLYSNSVNARES--EIPYPWLVFNEKMKVN-- 684
LYP I + + S+L T + +V + SVN R +P ++ + M
Sbjct: 1272 ASLYPNILRYDYEKRQWSTLST--NKRVRILDVSVNNRSELPNMPSKFVAYTNMMSSTRA 1329
Query: 685 SVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVADMYQCIRR----E 740
S ++ ++T V+ LL+ G + + + + +F N V+ +RR
Sbjct: 1330 SEYVNETTMVTLRQLLMMCGLKVENRVSVGQAKLDNFTVYFENVYVSASLSILRRFIETS 1389
Query: 741 LDELI---QNKLLNPRLNI 756
L+E +LLN L +
Sbjct: 1390 LNEFFAEPDKRLLNSHLEV 1408
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/605 (37%), Positives = 333/605 (55%), Gaps = 68/605 (11%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP + NR+L + ++QVV+++G+TGCGK+TQVPQ++L + + V CTQ
Sbjct: 161 RAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHV-------ACTQ 213
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRRI+ +S+++RV E + G VGY++R E + T+++F T G+LLR++ + +L
Sbjct: 214 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 273
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+IVDEVHER ++ DFLL VL+ LL +RP+L+++LMSAT++ LFSSYF A V+ +
Sbjct: 274 QYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPVVQV 333
Query: 185 PGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVEDTL 244
PG +P+ + D T K K PR ++ A++
Sbjct: 334 PGRLFPITVVYQPQEADQTAS-----------------KSEKLDPRP-FLRVLEAID--- 372
Query: 245 KAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLND 304
N+Y + R G +LVF++G +I ++ D
Sbjct: 373 -----NKYPPEER-----------------------------GDLLVFLSGMAEITTVLD 398
Query: 305 KLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVVF 364
QA L R ++L H +++ S+Q +FD +GVRK +L+TNIAETS+TI+ + F
Sbjct: 399 AAQAYASLTQ--RWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRF 456
Query: 365 VIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCVYDAFAE 424
V+D GK KE SYD L WIS SA+QR+GRAGR PG CYRLY YDAFA
Sbjct: 457 VVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAP 516
Query: 425 YQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNEE 484
Y +PEI R L +L LQ+KS+ +G F ++ P +V+ AI YL+ GALD +E
Sbjct: 517 YPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPPASVETAILYLQEQGALDSSEA 574
Query: 485 LTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAAK 544
LT +G LA LP++ +GKMLILG++F+ EPVLTI A LSV+ PF A+
Sbjct: 575 LTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPFTRSAQSNLDCATAR 634
Query: 545 SQFSHDYSDHLALVRAFEGWKD--AERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLK 602
D D L F W +ER ++C + + + + +LR++F LL+
Sbjct: 635 RPLESDQGDPFTLFNVFNAWVQVKSERSGNSRKWCRRRGVEEHRLYEMANLRRQFKELLE 694
Query: 603 DTGLV 607
D GL+
Sbjct: 695 DHGLL 699
>sp|O94536|UCP12_SCHPO Putative ATP-dependent RNA helicase ucp12 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ucp12 PE=3 SV=1
Length = 1327
Score = 358 bits (918), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 270/835 (32%), Positives = 416/835 (49%), Gaps = 135/835 (16%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LPA++ + +++ AI +QVV+ISGETG GK+TQV QFIL+ ++S + +++CTQ
Sbjct: 574 REKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDHYLSSGEKDLQTVVCTQ 633
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDR--N 122
PRRISA+S++ERVA ER +G+ VGY V E ++T L FCTTG+LLRR+
Sbjct: 634 PRRISAISLAERVAFERDTTVGKEVGYSVHGEKSISKETLLEFCTTGLLLRRIQQHGLGF 693
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L ++ V+VDEVHER + D LL +LK ++SR P L+++LMSAT++++ F YFG A +
Sbjct: 694 LSTLSCVVVDEVHERSIENDILLTLLKLVISRIPNLKVILMSATVNSDTFKYYFGNAGHL 753
Query: 183 NIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVED 242
+I G T+P++ +++ED N+ DD + PR++K
Sbjct: 754 HIHGRTFPIKDYYIEDFA-------PKLNEDDD---------EEDVPRRKK--------- 788
Query: 243 TLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEK--ERPGAVLVFMTGWDDIN 300
EY I ++LI ++ I + G++LVF+ G +I
Sbjct: 789 -------KEYE--------------IDYHLISRLVSSIDAELGSSSGSILVFLPGVSNIA 827
Query: 301 SLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITIN 360
++++ D ++ +L H S+ +SEQR F RKI+ ATNIAETSITI+
Sbjct: 828 RCIREIKSK----DGSKFEVLPLHASLNTSEQRRCFKTYTK--RKIICATNIAETSITID 881
Query: 361 DVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCVYD 420
DVV VID G+ K+ YD + +W S + QQRRGRAGRV+ G CY+LY R
Sbjct: 882 DVVAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQRRGRAGRVKKGICYKLYTR---- 937
Query: 421 AFAEYQL-----PEILRTPLQSLCLQI-----------KSLRLGTIAGFLSRALQSPELL 464
F E + PE+LRT L +CL + S+ G+I F++ + P
Sbjct: 938 GFEEKGMLGQTPPEVLRTALSQVCLNVVPLVKRFSSAGNSVNQGSIKKFMNSLIDPPNDA 997
Query: 465 AVQNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGL 524
V A++ L +GAL +E+LT LG+YL LP++ KLGK+L+ G+IF LEP LTI A L
Sbjct: 998 TVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLVFGSIFGYLEPALTITAIL 1057
Query: 525 SVRDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKD--AERGLAG-YEYCWKNF 581
S + PFL D A +S+ S + D LA R + W + RG+ ++C +
Sbjct: 1058 STKSPFLG----DDEAREIRSKQSQGWGDVLADARVYHNWLEILETRGVKKTVQWCEEMH 1113
Query: 582 LSAPSMKVIDSLRKEF--------LSLLKDTGLVDCDTSICNAWGRDERF--IRAVICYG 631
L +++ I R E L+ K TG D W E + +I
Sbjct: 1114 LHYTTLQQIRQNRNELSEAAQLLELTTKKLTGNFD--------WYSTENLTVLSTLIAAA 1165
Query: 632 LYPGISSIVQNGK------SSSLKTMEDGQVFLYSNSVNARESEIPYP------------ 673
L P + V K S SL+ ++ ++ + + N R P
Sbjct: 1166 LSPNVVKCVYPDKKFVASFSGSLEMEQEARLTKFYDQNNQRLFIHPSSTMFVNSPNASRC 1225
Query: 674 -WLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGSISQGEIDGHLKMMGGYLEFFMNPSVAD 732
++ + +K++ FL++ T ++ ++L G + D + +G L + D
Sbjct: 1226 TFVAYEQKVETTKPFLRNCTPINTYGMILLGAN------DILIDPLGKGL-------ILD 1272
Query: 733 MYQCIRRELDELIQNKLLNPRLNIHTHEDLLAAVRLLVAED--QCEGRFIFGHQV 785
CI+ +I K+L L+ HE L ++ L + QC I G+ V
Sbjct: 1273 QAYCIKAWPKVVILLKMLKRCLDASLHERLESSSGLNYESEIHQCIRTLIAGNGV 1327
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 348 bits (892), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 219/606 (36%), Positives = 330/606 (54%), Gaps = 70/606 (11%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP + NR+L + ++QVV+++G+TGCGK+TQVPQ++L + + V CTQ
Sbjct: 159 RAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHV-------ACTQ 211
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRRI+ +S+++RV E + G VGY++R E + T+++F T G+LLR++ + +L
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 271
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVINI 184
+IVDEVHER ++ DFLL VL+ LL RP+L+++LMSAT INI
Sbjct: 272 QYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSAT---------------INI 316
Query: 185 PGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVEDTL 244
F+ ++F + RL P + ++ + P KS + L
Sbjct: 317 SLFS----SYFSNAPVVQVPGRLFPITVV--------YQPQEAEPTTSKS-------EKL 357
Query: 245 KAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLND 304
F ++E + +ER G +LVF++G +I+++
Sbjct: 358 DPRPF--------------------LRVLESIDHKYPPEER-GDLLVFLSGMAEISAV-- 394
Query: 305 KLQANRILGDPT-RVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITINDVV 363
L+A + T R ++L H +++ ++Q +FD GVRK +L+TNIAETS+TI+ +
Sbjct: 395 -LEAAQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIR 453
Query: 364 FVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCVYDAFA 423
FV+D GK KE SYD L WIS SA+QR+GRAGR PG C+RLY YDAFA
Sbjct: 454 FVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFA 513
Query: 424 EYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGALDHNE 483
Y +PEI R L SL LQ+KS+ +G F ++ P +++ AI YL+ GALD +E
Sbjct: 514 PYPVPEIRRVALDSLVLQMKSMSVGDPRTF--PFIEPPPPASLETAILYLRDQGALDSSE 571
Query: 484 ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKDLAEAA 543
LT +G LA LP++ +GKMLILG++F+ +EPVLTI A LSV+ PF AA
Sbjct: 572 ALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSVQSPFTRSAQSSPECAAA 631
Query: 544 KSQFSHDYSDHLALVRAFEGWKD--AERGLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLL 601
+ D D L F W +ER ++C + + + + +LR++F LL
Sbjct: 632 RRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEEHRLYEMANLRRQFKELL 691
Query: 602 KDTGLV 607
+D GL+
Sbjct: 692 EDHGLL 697
>sp|Q06698|YL419_YEAST Putative ATP-dependent RNA helicase YLR419W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YLR419W PE=1
SV=1
Length = 1435
Score = 347 bits (890), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 221/653 (33%), Positives = 367/653 (56%), Gaps = 51/653 (7%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRG--AVCSIIC 62
R LPA+K++ ++ I++N+VV+I+GETG GK+TQV QFIL+ + +G I+C
Sbjct: 601 REQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDF-LQKEKGDFGKTKIVC 659
Query: 63 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRN 122
TQPRRISA+ ++ERV+ ER GE VGY +R TR+ F TTG+L+R L R
Sbjct: 660 TQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGVLVRLLQNART 719
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
+ T V++DEVHER ++ D ++ ++K+LL R +++VLMSAT++ +LF +F G
Sbjct: 720 MLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFKKFFPGLATC 779
Query: 183 NIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVED 242
+I G T+P+ +FLEDIL +++ ++ + S +D
Sbjct: 780 HIEGRTFPITDYFLEDILSDLDFKI------------------------KREKALSYDDD 815
Query: 243 TLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERP----GAVLVFMTGWDD 298
++ N ++ + R + I ++L+ V+ Y+ ++ + G+++VF+ G +
Sbjct: 816 SVDERNNDDQYLKPRADSKFFTSGQINYDLLCQVVEYVHKRLKAANDNGSIIVFLPGVGE 875
Query: 299 INSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSIT 358
IN + L AN+ + ++L H ++ +Q+ +F + G RK+V++TNIAETSIT
Sbjct: 876 INKCCN-LLANK--SNEADFMVLPLHSALTPEDQKRVFKK-YHGKRKVVVSTNIAETSIT 931
Query: 359 INDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCV 418
I+D V ID G+AK Y+ +NT+ L+ S+IS +QRRGRAGRV+ G Y+L+ + +
Sbjct: 932 IDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRGRAGRVREGLSYKLFSKNL 991
Query: 419 YDA-FAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIG 477
Y+ +PEI R PL+SL L +K++ + + FLS AL +P L A+Q A L IG
Sbjct: 992 YENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAFLSTALDAPPLPALQKAERILTTIG 1051
Query: 478 ALDHNEE-LTVLGQYLAMLP-MEPKLGKMLILGAIFNC--LEPVLTIVAGLSVRDPFLAP 533
+D +++ LT LGQ+++++P M+ K GK+LI G +F C + +L + G+ V PF+
Sbjct: 1052 LVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLVSILGIGVL-PFIGG 1110
Query: 534 MDKKDLAEA--AKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVID 591
+ ++ + K + D L +VR + KD+ +Y N LS + I
Sbjct: 1111 FENREKIKKLLCKYESRGDLFAVLEIVRDYFKIKDSS---IKRKYLRDNLLSYNKINEIK 1167
Query: 592 SLRKEFLSLLKDTGLVDCDTSI--CNAWGRDER---FIRAVICYGLYPGISSI 639
S ++ S+LKD G + D + + R+ER +RA++ YP I+ +
Sbjct: 1168 SSTAQYYSILKDVGFLPMDYKVGSISDLNRNERNFDILRAILTGAFYPHIARV 1220
Score = 38.1 bits (87), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 645 SSSLKTMEDGQVFLYSNSVNARESEIP----YPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
S++ +ED ++ + +R+S+IP YP+++F N ++L+D T + LL
Sbjct: 1293 STNSVNLEDAKLLSEVDGPISRQSKIPTVVKYPFVLFTTSQVTNKLYLRDLTPTTTLSLL 1352
Query: 701 LFGGSISQ---GEIDGHLKMMGGYLEFFMNPSVADMYQCIRRELDELIQNKLLNP 752
LFGG+IS G I ++ +L + + +R +LDE I+ KL +P
Sbjct: 1353 LFGGAISYDIGGTIHSPGIVVDNWLPIRTWCKNGVLIKELRTQLDEAIRKKLESP 1407
>sp|B4LX81|SPNE_DROVI Probable ATP-dependent RNA helicase spindle-E OS=Drosophila virilis
GN=spn-E PE=3 SV=1
Length = 1433
Score = 325 bits (832), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 216/657 (32%), Positives = 345/657 (52%), Gaps = 66/657 (10%)
Query: 6 RNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQP 65
+NLP Y ++ +++ AI +N VVI+ GETGCGKTTQVPQ+IL+ R C+I+ TQP
Sbjct: 115 KNLPIYAQREQIMKAIRENPVVILKGETGCGKTTQVPQYILDEACK--RREFCNIVVTQP 172
Query: 66 RRISAMSVSERVASERGEKLGESVGYKVRLEGMKG-RDTRLLFCTTGILLRRLLVDRNLK 124
RRI+A+S++ RV ER + G Y+V L DTRLL+CTTG+LL L+ + L
Sbjct: 173 RRIAAISIANRVCQERQWQPGTVCSYQVGLHRQSNVEDTRLLYCTTGVLLNNLIRLKTLT 232
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLS-RRPELRLVLMSATLDAELFSSYFGGAT--- 180
TH+++DEVHER + DFLLIV++ LL+ ++++LMSAT+D FS YF ++
Sbjct: 233 HYTHIVLDEVHERDQDMDFLLIVVRRLLALNSRHVKVILMSATIDTREFSKYFATSSAFP 292
Query: 181 --VINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIAS 238
V G YP+ ++ + + ++ D QE+ AP A
Sbjct: 293 PVVTASHGRKYPLVKYYRDQLKNI---------HWKDEPQER-------APGIGPEGYAD 336
Query: 239 AVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDD 298
A++ L N + +G +L Y E +R G+VL+F+ G ++
Sbjct: 337 AIKILLVIDNMERKA--------------VGQSLQSYE-----EAKRTGSVLIFLPGINE 377
Query: 299 INSLNDKLQANRILGDPTRVL-LLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
I+++ D + + + +PT ++ ++ CH M+ Q +F P G RKI+L TNIAE+SI
Sbjct: 378 IDTMADHI-TSVMEENPTMIITIVRCHSLMSPDSQEEVFQPPLPGHRKIILTTNIAESSI 436
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRC 417
T+ DV +VID K D N SCL W S V+ +QR GR GR++ G YR+ +
Sbjct: 437 TVPDVSYVIDFCLTKVLHTDTATNYSCLRLEWASKVNCRQRAGRVGRLRSGRVYRMVSKA 496
Query: 418 VY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
Y + E+ +PE+LR+PLQ+ L+ K L +G + L+ A+ P L +QN + LK +
Sbjct: 497 FYLEEMKEFGIPEMLRSPLQNSVLKAKELEMGRPSEILALAMSPPNLSDIQNTVLLLKEV 556
Query: 477 GAL---------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVR 527
GAL + + +LT G ++ P++ +L +++ILG +FNCLE V+ I AG++VR
Sbjct: 557 GALYTTVDGVYEELDGDLTYWGTIMSRFPLDVRLSRLIILGYVFNCLEEVIVIAAGMTVR 616
Query: 528 DPFLAPMDKKDLAEAAKSQF---SHDYSDHLALVRAFEGWKD--AERGLAGYEYCW-KNF 581
+L ++ + +A + SD +A+ R + + + +R L W + F
Sbjct: 617 SLYLTG-KRRQVNDAFWMHYIFADGSGSDMVAIWRVYRIYLNMCQDRMLKESAEQWARRF 675
Query: 582 -LSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFI--RAVICYGLYPG 635
++ S+K + + +E L C W E+ I + +I YP
Sbjct: 676 NVNLRSLKEMHLMVQELRQRCASVNLQPLPYGTCQMWDDREKSIILKVIIAGAFYPN 732
>sp|B4JT42|SPNE_DROGR Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
grimshawi GN=spn-E PE=3 SV=1
Length = 1434
Score = 318 bits (816), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 192/554 (34%), Positives = 299/554 (53%), Gaps = 66/554 (11%)
Query: 2 LEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSII 61
L R+LP Y ++ +++ AI +N VVI+ GETGCGKTTQVPQ+IL+ + C+I+
Sbjct: 111 LNRNRSLPIYAQREQIMKAIKENPVVILKGETGCGKTTQVPQYILDEAFK--KREFCNIV 168
Query: 62 CTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLVD 120
TQPRRI+A+S++ RV ER + G Y+V L DTRLL+CTTG+LL L+
Sbjct: 169 VTQPRRIAAISIANRVCQERRWQPGTVCSYQVGLHKQSNSADTRLLYCTTGVLLNNLIRL 228
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLS-RRPELRLVLMSATLDAELFSSYFGGA 179
+ L TH+++DEVH+R + DFLLIV++ LL+ ++++LMSAT+D F YF
Sbjct: 229 KTLTHYTHIVLDEVHDRDQDMDFLLIVVRRLLALNSRHVKVILMSATIDTREFCKYFASC 288
Query: 180 -----TVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKS 234
V G YP+ ++ + + ++ WK P++R+
Sbjct: 289 KSMPPVVAASHGRKYPLVKYYRDQLKNIN------------------WKTE---PQQREP 327
Query: 235 QIA-----SAVEDTLKAANFNEYSS-QTRESLSCWNPDCIGFNLIEYVLCYICEKERPGA 288
I AV+ L N + Q+ +S E +R G+
Sbjct: 328 GITHEGYRDAVKILLVIDNMERKAEGQSEQSYE--------------------EAKRTGS 367
Query: 289 VLVFMTGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVL 348
VL+F+ G ++I+++ + ++ ++ ++ CH M+S Q +F P SG RK++L
Sbjct: 368 VLIFLPGVNEIDTMAEHIEHVMNESPNIKITIVRCHSLMSSDSQEDVFQPPLSGHRKVIL 427
Query: 349 ATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPG 408
TNIAE+SIT+ DV +VID AK D +N SCL W S V+ +QR GR GR + G
Sbjct: 428 TTNIAESSITVTDVSYVIDFCLAKVMHIDTASNFSCLCLEWASKVNCRQRAGRVGRTRSG 487
Query: 409 ECYRLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQ 467
YR+ + Y + E+ +PE+LR+PLQS L+ K L +G + L+ A+ P L +
Sbjct: 488 RVYRMVTKAFYMEEMQEFGIPEMLRSPLQSSVLKAKELDMGGPSEILALAMSPPNLTDIH 547
Query: 468 NAIEYLKIIGAL---------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVL 518
N + LK +GAL + +LT G ++ P++ +L +++ILG IFNCL+ +
Sbjct: 548 NTVLLLKEVGALYTTVDGVYEQLDGDLTYWGTIMSRFPLDVRLSRLIILGYIFNCLDEAI 607
Query: 519 TIVAGLSVRDPFLA 532
I AG+SVR +L+
Sbjct: 608 IIAAGMSVRSLYLS 621
>sp|B2RR83|YTDC2_MOUSE Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus GN=Ythdc2
PE=2 SV=1
Length = 1445
Score = 317 bits (813), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/495 (37%), Positives = 283/495 (57%), Gaps = 33/495 (6%)
Query: 241 EDTLKAANFNEYSSQTRESLSCW----NPDCIGFNLIEYVLCYICEKERPGAVLVFMTGW 296
E +L N N+ S++ RE L + + + + +LI ++L IC GA+L+F+ G+
Sbjct: 588 ESSLVQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAILIFLPGY 647
Query: 297 DDINSLNDKL--QANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAE 354
D+I L D++ R + R + H +M +S+Q+ + P +GVRKI+L+TNIAE
Sbjct: 648 DEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAE 707
Query: 355 TSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLY 414
TSIT+NDVVFVID GK KE S+DALN + L WIS SA QR+GRAGR +PG C+RL+
Sbjct: 708 TSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLF 767
Query: 415 PRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRL--GTIAGFLSRALQSPELLAVQNAIEY 472
R + E+Q PE+LR PLQ LCL K L TIA FL +A + P L V+NA++
Sbjct: 768 SRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFLMKAPEPPPALIVRNAVQM 827
Query: 473 LKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLA 532
LK I A+D E+LT LG +LA LP+EP LGKM++ + CL+P+LTI L+ RDPF+
Sbjct: 828 LKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVL 887
Query: 533 PMD--KKDLAEAAKSQFSH-DYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKV 589
P +K A + +F+ +SDH+AL+RAF+ W+ A +C KNFLS +M++
Sbjct: 888 PTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEI 947
Query: 590 IDSLRKEFLSLLKDTGLVDC----DTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKS 645
I +R + L L+ +G V D N + ++A + G+YP + + + ++
Sbjct: 948 IIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHV--DREN 1005
Query: 646 SSLKTMEDGQVFLYSNSV------------NARESEI---PYPWLVFNEKMKVNSVF-LK 689
L ++ +V + SV N + + I P WL+++E + + + ++
Sbjct: 1006 VILTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIR 1065
Query: 690 DSTAVSDSVLLLFGG 704
+AV+ +L+F G
Sbjct: 1066 CCSAVTPVTVLVFCG 1080
Score = 216 bits (550), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 157/248 (63%), Gaps = 19/248 (7%)
Query: 4 FRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICT 63
FR++LP ++++ ++ I +N+VV+I GETG GKTTQ+PQF+L+ + G C I CT
Sbjct: 204 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKN--GIPCRIFCT 261
Query: 64 QPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLV-DRN 122
QPRR++A++V+ERVA+ER E++G+++GY++RLE T L FCT G+LLR L+ D
Sbjct: 262 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDST 321
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L VTHVIVDEVHER DFLL L+DLL + P L+L+L SA LD LF YFG VI
Sbjct: 322 LSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 381
Query: 183 NIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA----- 237
I G + V+ FLEDIL TG Y ++M K K+ R+ K Q
Sbjct: 382 YIQGRPFEVKEMFLEDILRTTG-----------YTNKEMLKYKKEKQREEKQQTTLTEWY 430
Query: 238 SAVEDTLK 245
SA E+T K
Sbjct: 431 SAQENTFK 438
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 315 bits (808), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 216/698 (30%), Positives = 347/698 (49%), Gaps = 108/698 (15%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R LP +K + +L + + +II GETGCGK+TQVPQF+LE+ + I+ TQ
Sbjct: 74 RIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGR---QIVITQ 130
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PRR++ ++++ RVA E+ LG VGY VR + + +DT++ F T G+LLR +L D L
Sbjct: 131 PRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLLS 190
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYF-------- 176
+ +++DE HER N D LL +L+ ++ R +LR+++ SATLDAELF +F
Sbjct: 191 KYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGNS 250
Query: 177 --GGATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKS 234
A +I++ G T+PV H + + DY Q
Sbjct: 251 DKDTAGIISVEGRTHPVAVHHTK-------------TSVPDYCQ---------------- 281
Query: 235 QIASAVEDTLKAANFNEYSSQTRESLSCWNP-DCIGFNLIEYVLCYICEKERPGAVLVFM 293
SAV+ + N +++ NP D + F + + +CEK R
Sbjct: 282 ---SAVDTVI---NIHKHE----------NPGDILVFLTGQDEVEDVCEKLR-------- 317
Query: 294 TGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
+L N L + R+ ++ C+G++ + EQ FD G RK+V+ATNIA
Sbjct: 318 -----------ELAGN--LKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIA 364
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRL 413
E SITI + +VID G K + A N L+ +S SA+QR GRAGR++PG+CYRL
Sbjct: 365 EASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRL 424
Query: 414 YPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
YP ++ FAE +PEI R + S LQ+K+L + + F L P A+ N +E L
Sbjct: 425 YPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRF--HYLSPPPSWAMINGLELL 482
Query: 474 KIIGALDHNEELTV-LGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLA 532
+GA+D +LT LG +A P+ P K L+ A F C ++TIVA + ++D F+
Sbjct: 483 YALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFIT 542
Query: 533 PMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDS 592
P ++ A+ + +F+ + DH+ ++ F + + R ++C +F++ + D+
Sbjct: 543 PYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGR---SKKWCSDHFVNYRGLMRADN 599
Query: 593 LRKEFLSLLK--------DTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGK 644
+R + + LLK GL++C + IR + G + + GK
Sbjct: 600 VRSQLVRLLKRFEIEKVSSRGLINCSEN-----------IRQCLVTGFFSQAAQYHYTGK 648
Query: 645 SSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMK 682
++K E +Y S + + P W++F E M+
Sbjct: 649 YMTVK--ESFPFNMYKGSSIMFKKDYP-KWVIFTEVMQ 683
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 314 bits (805), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 231/718 (32%), Positives = 358/718 (49%), Gaps = 102/718 (14%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
+ LP ++ +++LL+ I +NQVV+I GETG GKTTQ+ Q++ E + RG SI+ TQ
Sbjct: 347 KEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGK--SIVVTQ 404
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRD-TRLLFCTTGILLRRLLVDRNL 123
PRR++A+SV++RVA E LG+ VGY +R E + + T+L F T GILLR L+D L
Sbjct: 405 PRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTL 464
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVIN 183
+ VI+DE HER +N D LL K LL+RR +L+L++ SAT++A+ FS++FG A
Sbjct: 465 DKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFT 524
Query: 184 IPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVEDT 243
IPG T+PV+T + N + DY + +AV
Sbjct: 525 IPGRTFPVQTIYTS-------------NPVQDY-------------------VEAAVSQA 552
Query: 244 LKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINSLN 303
+K N+ SS G +L+FMTG +DI +
Sbjct: 553 VKIHLANDCSS--------------------------------GDILIFMTGQEDIETTF 580
Query: 304 DKLQANRI-----------LGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNI 352
D LQ + + + +L + ++ + Q IF + RKI++ATNI
Sbjct: 581 DTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNI 640
Query: 353 AETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYR 412
AETS+TI + +VIDCG +K Y+ L+ + IS +A QR GRAGR PG YR
Sbjct: 641 AETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYR 700
Query: 413 LYPRCVYDAFAE----YQLPEILRTPLQSLCLQIKSLRLGTIAGFLSR--ALQSPELLAV 466
LY D F E +PEI RT +L + L+ + LS+ + P L
Sbjct: 701 LY---TEDTFKEDMYLQTIPEIQRT---NLSNTLLLLKSLDVTDELSKFPFIDKPPLQTF 754
Query: 467 QNAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSV 526
+++ L IGA+D + +LT LG +A P++P L K+L++ C + +LTIV+ LSV
Sbjct: 755 LSSLYELWFIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSV 814
Query: 527 RDPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPS 586
F P +++ A+ A+++F SDHL L+ FE W+ +C K+F+ S
Sbjct: 815 PQVFYRPKERQKEADIARNKFFIAKSDHLTLLNVFEQWRANN---FSSHWCNKHFVQYKS 871
Query: 587 MKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSS 646
+ +R + L++LK + + G+D I+ IC G + I
Sbjct: 872 LVRARDIRDQLLTILKSQKIPVISS------GKDWDIIKKCICSGFAHQAAKITGLRNYV 925
Query: 647 SLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGG 704
LKT Q L+ S ++P P++V++E + + ++ T+V L+ +GG
Sbjct: 926 HLKTGVSVQ--LHPTSALHGLGDLP-PYVVYHELLMTSKEYICCVTSVDPFWLMEYGG 980
>sp|Q9H6S0|YTDC2_HUMAN Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens GN=YTHDC2
PE=1 SV=2
Length = 1430
Score = 311 bits (798), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 182/493 (36%), Positives = 278/493 (56%), Gaps = 29/493 (5%)
Query: 241 EDTLKAANFNEYSSQTRESLSCW----NPDCIGFNLIEYVLCYICEKERPGAVLVFMTGW 296
E +L N ++ S++ RE L + + + + +LI ++L IC GAVL+F+ G+
Sbjct: 573 ESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGY 632
Query: 297 DDINSLNDKL--QANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAE 354
D+I L D++ R R + H +M +S+Q+ + P +GVRKI+L+TNIAE
Sbjct: 633 DEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAE 692
Query: 355 TSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLY 414
TSIT+NDVVFVID GK KE S+DALN + L WIS SA QR+GRAGR +PG C+RL+
Sbjct: 693 TSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLF 752
Query: 415 PRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGT--IAGFLSRALQSPELLAVQNAIEY 472
R + E+Q PE+LR PLQ LCL K L IA FL +A + P L V+NA++
Sbjct: 753 SRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQM 812
Query: 473 LKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLA 532
LK I A+D E+LT LG +LA LP+EP LGKM++ + CL+P+LTI L+ RDPF+
Sbjct: 813 LKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVL 872
Query: 533 PMD--KKDLAEAAKSQFSHD-YSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKV 589
P +K A + +F+ +SDH+AL+RAF+ W+ A +C KNFLS +M++
Sbjct: 873 PTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEI 932
Query: 590 IDSLRKEFLSLLKDTGLVDC----DTSICNAWGRDERFIRAVICYGLYPGI-----SSIV 640
I +R + L L+ +G V D N + ++A + G+YP + ++V
Sbjct: 933 IIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENLV 992
Query: 641 QNG--------KSSSLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVF-LKDS 691
G +S+ + + +N A +P WL+++E + + + ++
Sbjct: 993 LTGPKEKKVRFHPASVLSQPQYKKIPPANGQAAAIKALPTDWLIYDEMTRAHRIANIRCC 1052
Query: 692 TAVSDSVLLLFGG 704
+AV+ +L+F G
Sbjct: 1053 SAVTPVTILVFCG 1065
Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 141/203 (69%), Gaps = 3/203 (1%)
Query: 4 FRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICT 63
FR++LP ++++ ++ I +N+VV+I GETG GKTTQ+PQF+L+ + G C I CT
Sbjct: 189 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKN--GIPCRIFCT 246
Query: 64 QPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLV-DRN 122
QPRR++A++V+ERVA+ER E++G+++GY++RLE T L FCT G+LLR L+ D
Sbjct: 247 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDST 306
Query: 123 LKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGATVI 182
L VTHVIVDEVHER DFLL L+DLL + P L+L+L SA LD LF YFG VI
Sbjct: 307 LSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 366
Query: 183 NIPGFTYPVRTHFLEDILDMTGY 205
I G + V+ FLEDIL TGY
Sbjct: 367 YIQGRPFEVKEMFLEDILRTTGY 389
>sp|Q7QCW2|SPNE_ANOGA Probable ATP-dependent RNA helicase spindle-E OS=Anopheles gambiae
GN=spn-E PE=3 SV=5
Length = 1463
Score = 311 bits (797), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 215/652 (32%), Positives = 336/652 (51%), Gaps = 63/652 (9%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
L ++ K +L AI +N VV++ G TGCGKTTQVPQ++LE R C+I+ TQPR+
Sbjct: 121 LTIHQSKQDILKAIRENPVVVLQGMTGCGKTTQVPQYLLEDAYN--RKEWCNIVVTQPRK 178
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVT 127
I+A S++ RVA ER LG VG+KV L+ M DTRL + TTG+LL +L+ +++ T
Sbjct: 179 IAASSIARRVAEERNCALGSLVGFKVGLKEMVSEDTRLTYVTTGVLLNKLITSKSISSYT 238
Query: 128 HVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG--GATVINIP 185
H+I+DEVHER ++ DFLLI+++ LL+ +++LMSAT+++ F+ YF G + P
Sbjct: 239 HIILDEVHEREVDMDFLLIIVRRLLATMRNTKIILMSATIESSEFAQYFKIPGPNSLFAP 298
Query: 186 GFT------YPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASA 239
+ V ++LED+ + Y Q D + EKM+ ++ + + +
Sbjct: 299 QLAVSNVTQHDVSVYYLEDLEKLRVDFTIKYEQPDVH--EKMYFLAAKV-----AVVCDR 351
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDI 299
D ++A+ +Y P I F L I E ER VL G ++
Sbjct: 352 FIDEFESASTIDYK-----------PSIIMF------LPGINEIERMAEVLRNFLGDSNV 394
Query: 300 NSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITI 359
NS + T+ +L H + S EQ L+F +P G RK++L+TNIAE+SITI
Sbjct: 395 NS-----------QEQTKFTILKLHSMLPSEEQALVFTKPSPGYRKVILSTNIAESSITI 443
Query: 360 NDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCVY 419
DV FVID + D LNN + L W S + QR GR GRV G YRL + +
Sbjct: 444 PDVKFVIDFCLHRVLVADTLNNFTTLRTQWASRNNCIQRAGRCGRVMNGRVYRLVNKHFF 503
Query: 420 D-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGA 478
+ A+ PE++R PL ++ L+ K L +G L+ A+ P L V N + LK +GA
Sbjct: 504 EHGMAQSIEPEMVRCPLSNVVLKTKLLDMGPPHTILALAMSPPNLSDVSNTVLQLKELGA 563
Query: 479 L---------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDP 529
L + ++T LG ++ LP++ L K+++LG +F+ LE + I AG++V++
Sbjct: 564 LLRTAKGVYDLQDGDITYLGNIMSTLPLDIHLAKLVVLGYVFSVLEEAIVIAAGMNVKNI 623
Query: 530 FLAPMDKKDLAEAAKSQFSH-DYSDHLALVRAFEGWKDA-ERGLAG--YEYCWKNFLSAP 585
F + L K F++ SD +A++ A+ W+ E+G G ++C + L
Sbjct: 624 FCQLRTIEAL--RVKRHFANGSASDGIAILNAYNWWRSIREQGTGGDTTDWCNRYMLDRK 681
Query: 586 SMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDER--FIRAVICYGLYPG 635
S+ + L +E LK + + W ER ++ V+ YP
Sbjct: 682 SLIEMAELVQEITMRLKTANIRVVSGANNARWTDRERTVVLKVVMAGAFYPN 733
>sp|Q296Q5|SPNE_DROPS Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
pseudoobscura pseudoobscura GN=spn-E PE=3 SV=2
Length = 1433
Score = 310 bits (793), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 192/543 (35%), Positives = 295/543 (54%), Gaps = 53/543 (9%)
Query: 6 RNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQP 65
++LP Y ++ ++ AI++N VVI+ GETGCGKTTQVPQ+IL+ S C+I+ TQP
Sbjct: 114 KSLPIYAKREEIINAINENPVVIVKGETGCGKTTQVPQYILDEGFKS--KQYCNIVVTQP 171
Query: 66 RRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR--DTRLLFCTTGILLRRLLVDRNL 123
RRI+A+S++ RV ER + G GY+V L R DTRLL+CTTG+LL L+ ++ L
Sbjct: 172 RRIAAISIANRVCQERQWQRGTVCGYQVGLHRQLERFADTRLLYCTTGVLLNILVNNKTL 231
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRP-ELRLVLMSATLDAELFSSYFGGATVI 182
TH+++DEVHERG DFLLIV++ LL+ ++++LMSAT++ S YF
Sbjct: 232 THYTHIVLDEVHERGQEMDFLLIVIRRLLATNSRHVKVILMSATINPRELSDYFANER-- 289
Query: 183 NIPGFTYPVRTHFLEDILDMT-GYRLTPYNQIDDYGQEKMWKMSKQ---APRKRKSQIAS 238
+ P ++D + G T D Q W+ ++ +P + S
Sbjct: 290 -----SAP-------PVIDASYGRNFTVEKYYRDQLQTINWEGHQEDINSPGITQEGYRS 337
Query: 239 AVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDD 298
A++ L N T +S + + R G++L+F+ G +
Sbjct: 338 AIKTILVIDNMERNERSTGKSYN--------------------QSLREGSILIFLPGVGE 377
Query: 299 INSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSIT 358
IN+++D L+ + ++ CH M+S +QR IF G RKI++ATN+AE+SIT
Sbjct: 378 INNMSDMLKDMANHDSIMKFNMVRCHSLMSSDDQREIFQPSPPGYRKIIMATNVAESSIT 437
Query: 359 INDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCV 418
+ DV ++ID K D N S L W S + +QR GR GR++ G YR+ +
Sbjct: 438 VPDVSYIIDFCLEKVLFTDTFTNFSSLRLVWASKTNCRQRAGRVGRLRNGRVYRMVTKSF 497
Query: 419 YD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIG 477
Y +EY +PE+LR+PLQ+ L+ K L++GT L+ AL P L + N I LK +G
Sbjct: 498 YQRELSEYSVPEMLRSPLQNCVLKAKELKMGTPVEMLALALSPPNLSDICNTILLLKEVG 557
Query: 478 AL---------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRD 528
AL + ++T G ++ LP++ +L +++ILG IFN L+ + I AGL+VR
Sbjct: 558 ALFPTVDGTYDPCDGDITYWGTIMSKLPLDTRLSRLIILGYIFNLLDEAIIIAAGLTVRG 617
Query: 529 PFL 531
F+
Sbjct: 618 IFV 620
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 306 bits (784), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 204/712 (28%), Positives = 356/712 (50%), Gaps = 100/712 (14%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R+ LP +K +N +L I Q V+I GETGCGK+TQ+PQ++ E+ T+ G V + TQ
Sbjct: 51 RQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLVDRNL 123
PRR++A++V+ RVA ERG LG VGY +R + + TR+ F T G+L+R ++VD L
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLL 167
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG------ 177
+ +++DE HER + D + +LK + +R +LRL++ SATLDA+ F +F
Sbjct: 168 TKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSD 227
Query: 178 ----GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRK 233
++ + G T+PV +L+ + + DY
Sbjct: 228 PARDTCVILTVGGRTFPVDIFYLQ-------------SPVPDY----------------- 257
Query: 234 SQIASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFM 293
I S VE +K I + E G +L F+
Sbjct: 258 --IKSTVETVVK----------------------------------IHQTEGDGDILAFL 281
Query: 294 TGWDDINS----LNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLA 349
TG +++ + L ++ +A G + +L + + S EQ +F+ VRK+++A
Sbjct: 282 TGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVA 341
Query: 350 TNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGE 409
TN+AETSITI+ +V+VIDCG K +Y+ CL+ +S SA QR GR GR + G+
Sbjct: 342 TNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGK 401
Query: 410 CYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNA 469
CYRLY +D + +PE+ R+ L + LQ+K+L + + F + P ++ A
Sbjct: 402 CYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRF--HFMSPPPAQSMVQA 459
Query: 470 IEYLKIIGALDHNEELT-VLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRD 528
+E L +G LD + LT LG +A P+ P KML+ F C + +L+I A + +++
Sbjct: 460 LELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN 519
Query: 529 PFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMK 588
F+ P ++K A +F+ + DHL ++ +E + + ++C ++FL+ +
Sbjct: 520 IFVVPPNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHNK---NSQWCQEHFLNYKGLV 576
Query: 589 VIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSL 648
++R++ L LV ++ G + +R ++ G + + G ++
Sbjct: 577 RAATVREQLKKL-----LVKFQVPKKSSEGDPDPVLRCIVS-GFFANAARFHSTGAYRTI 630
Query: 649 KTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
+ +D ++ ++ SV +E P W+++NE ++ + +++D TA+ + LL
Sbjct: 631 R--DDHELHIHPASV--LYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLL 678
>sp|B4PRJ9|SPNE_DROYA Probable ATP-dependent RNA helicase spindle-E OS=Drosophila yakuba
GN=spn-E PE=3 SV=1
Length = 1436
Score = 306 bits (784), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 226/667 (33%), Positives = 334/667 (50%), Gaps = 80/667 (11%)
Query: 6 RNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQP 65
+NLP Y ++ +L AI+ N VVI+ GETGCGKTTQVPQ+IL+ S G C+I+ TQP
Sbjct: 112 KNLPIYAKREEILAAINANPVVILKGETGCGKTTQVPQYILDEGYKS--GKYCNIVVTQP 169
Query: 66 RRISAMSVSERVASERGEKLGESVGYKVRLEGMKG-RDTRLLFCTTGILLRRLLVDRNLK 124
RRI+A+S++ RV ER + Y+V L DTRLL+CTTG+LL L+ ++ L
Sbjct: 170 RRIAAISIANRVCQEREWQQDTVCSYQVGLHRPTSLEDTRLLYCTTGVLLNNLIRNKTLT 229
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRP-ELRLVLMSATLDAELFSSYFGGATVIN 183
TH+++DEVHER + DFLLIV++ LL+ ++++LMSAT+DA S YF T +
Sbjct: 230 HYTHIVLDEVHERDQDMDFLLIVVRRLLATNSRHVKIILMSATIDARELSDYF--TTTNS 287
Query: 184 IPGFTYPV------RTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQ---APRKRKS 234
IP PV R H +E YR D G K WK + P+
Sbjct: 288 IP----PVISASHGRKHSIEKF-----YR-------DQMGSIK-WKEEEDDQLVPQINDH 330
Query: 235 QIASAVEDTLKAANFN-EYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFM 293
+AV+ + N E + +R S E R GAVL+F+
Sbjct: 331 GYRAAVKIIMVIDNMEREGAIHSRMSYD--------------------EALRYGAVLIFL 370
Query: 294 TGWDDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIA 353
G +I+++ + + +V ++ C M QR +F P G RKI+L TNIA
Sbjct: 371 PGIYEIDTMAENITLMLENDRNVKVFIVRCFSLMTPENQRDVFHPPPPGFRKIILTTNIA 430
Query: 354 ETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRL 413
E+SIT+ DV +VID K D N S L +W S + +QR GR GR++ G YR+
Sbjct: 431 ESSITVPDVSYVIDFCLTKVLVTDTATNFSSLRLTWASKANCRQRAGRVGRLRSGRVYRM 490
Query: 414 YPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEY 472
+ Y +E+ +PE+LR PLQ+ L+ K L +G+ L+ AL P L +QN I
Sbjct: 491 VNKSFYQREMSEFGIPEMLRLPLQNSVLRAKELEMGSPVEILALALSPPNLSDIQNTILL 550
Query: 473 LKIIGAL---------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAG 523
LK +GAL + ++T G ++ LP++P+L +++ILG +FN LE + + AG
Sbjct: 551 LKEVGALFLTVDGVYNAMDGDVTYWGTIMSRLPLDPRLSRLIILGYVFNLLEEAIIMAAG 610
Query: 524 LSVRDPFLAPMDKKDLAEAAKSQFSHDY-------SDHLALVRAFEGWKDAERGLAGYE- 575
LS+R ++ A F Y SD +A+ R + + + G+E
Sbjct: 611 LSMRGLYVHEGSSSRSTRAQFDSFWMHYIFADGSGSDLVAIWRVYLTYLNMVE--IGHEQ 668
Query: 576 ---YCWKN--FLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAW-GRDERFIRAVIC 629
W N +S S+K + L +E + GL+ + R++ FI VI
Sbjct: 669 ESAIRWANRFHVSLRSLKEMHLLVQELRVRCTNLGLIPFSVNPSQIMDDREKSFILKVII 728
Query: 630 YG-LYPG 635
G YP
Sbjct: 729 AGAFYPN 735
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 306 bits (783), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 209/734 (28%), Positives = 362/734 (49%), Gaps = 109/734 (14%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
R+ LP +K +N +L I Q V+I GETGCGK+TQ+PQ++ E+ T+ G V + TQ
Sbjct: 51 RQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR-DTRLLFCTTGILLRRLLVDRNL 123
PRR++A++V+ RVA ERG LG VGY +R + + TR+ F T G+L+R ++VD L
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLL 167
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFG------ 177
+ +++DE HER + D + +LK + +R +LRL++ SATLDA+ F +F
Sbjct: 168 TKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSD 227
Query: 178 ----GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRK 233
++ + G T+PV +L+ + + DY
Sbjct: 228 PARDTCVILTVEGRTFPVDIFYLQ-------------SPVPDY----------------- 257
Query: 234 SQIASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFM 293
I S VE +K I + E G VL F+
Sbjct: 258 --IKSTVETVVK----------------------------------IHQTEGDGDVLAFL 281
Query: 294 TGWDDINS----LNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLA 349
TG +++ + L ++ +A G + +L + + S EQ +F+ VRK+++A
Sbjct: 282 TGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVA 341
Query: 350 TNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGE 409
TN+AETSITI+ +V+VIDCG K +Y+ CL+ +S SA QR GR GR + G+
Sbjct: 342 TNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGK 401
Query: 410 CYRLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNA 469
CYRLY +D + +PE+ R+ L + LQ+K+L + + F + P ++ A
Sbjct: 402 CYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRF--HFMSPPPAQSMVQA 459
Query: 470 IEYLKIIGALDHNEELT-VLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRD 528
+E L +G LD + LT LG +A P+ P KML+ F C + +L+I A + +++
Sbjct: 460 LELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN 519
Query: 529 PFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMK 588
F+ P ++K A +F+ + DHL ++ +E + + ++C ++FL+ +
Sbjct: 520 IFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNK---DSKWCQEHFLNYKGLV 576
Query: 589 VIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSL 648
++R++ L LV ++ G + +R ++ G + + G ++
Sbjct: 577 RAATVREQLKKL-----LVKFQVPRKSSEGDPDLVLRCIVS-GFFANAARFHSTGAYRTI 630
Query: 649 KTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLLLFGGSISQ 708
+ +D ++ ++ SV +E P W+++NE ++ + +++D TA+ + LL
Sbjct: 631 R--DDHELHIHPASV--LYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLL-------- 678
Query: 709 GEIDGHLKMMGGYL 722
E+ H G +L
Sbjct: 679 -ELAPHFYQQGTHL 691
>sp|B4NBB0|SPNE_DROWI Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
willistoni GN=spn-E PE=3 SV=1
Length = 1432
Score = 305 bits (782), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 189/544 (34%), Positives = 294/544 (54%), Gaps = 55/544 (10%)
Query: 6 RNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQP 65
+ LP Y ++++++ AI +N VVI+ GETGCGKTTQVPQ+I++ + + C+I+ TQP
Sbjct: 113 KTLPIYTQRDQIMKAIRENTVVILKGETGCGKTTQVPQYIIDEAYQNRQ--YCNIVVTQP 170
Query: 66 RRISAMSVSERVASERGEKLGESVGYKVRLEGMKG-RDTRLLFCTTGILLRRLLVDRNLK 124
RRI+A+S++ RV+ ER + G Y+V L G D RLL+CTTG+LL L+ + L
Sbjct: 171 RRIAAISIANRVSQERHWEPGTVCSYQVGLHRQSGSEDARLLYCTTGVLLNFLINHKTLT 230
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRP-ELRLVLMSATLDAELFSSYF----GGA 179
TH+++DEVHER DFLLIV++ LL+ ++++LMSAT+D+ F YF G
Sbjct: 231 HYTHIVLDEVHERDQEMDFLLIVVRRLLATNSRHVKVILMSATIDSREFVQYFATKNGIP 290
Query: 180 TVINIP-GFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIAS 238
VIN G YP+ + + + +M P + P ++
Sbjct: 291 PVINASHGRKYPLVKFYRDQLKNMQWQEDQP---------------NPDEPGMGSHGYSA 335
Query: 239 AVEDTLKAANFNEYSS-QTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWD 297
A++ L N + Q++ S E + G+VL+F+ G +
Sbjct: 336 AIKILLVIDNMERRTEGQSQRSYE--------------------ENLKTGSVLIFLPGIN 375
Query: 298 DINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
+I+++ + + +V ++ CH M QR +F P G RKI+L TNIAE+SI
Sbjct: 376 EIDNMAESIDHVMQENPALKVSIIRCHSLMTPDSQRDVFASPPVGYRKIILTTNIAESSI 435
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRC 417
T+ DV +VID AK D N S L W S + +QR GR GR++ G YR+ P+
Sbjct: 436 TVPDVSYVIDFCLAKVLVTDTATNFSSLRLVWASKSNCRQRAGRVGRLRSGRVYRMVPKS 495
Query: 418 VY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
Y E+ +PE+LR+PL+S L+ K L +G L+ AL P+L ++N I LK +
Sbjct: 496 FYMKHMLEFGVPEMLRSPLESSVLKAKELNMGPPIEMLALALSPPKLSDIRNTILLLKEV 555
Query: 477 GAL---------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVR 527
GAL + + +LT G + LP++ +L ++++LG +FNCL+ + + AGLSVR
Sbjct: 556 GALYPTVDGNYVELDGDLTPWGSIMTRLPLDIRLSRLVLLGYVFNCLDEAIVMAAGLSVR 615
Query: 528 DPFL 531
+L
Sbjct: 616 GLYL 619
>sp|B4HLH4|SPNE_DROSE Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
sechellia GN=spn-E PE=3 SV=1
Length = 1434
Score = 305 bits (781), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 201/541 (37%), Positives = 299/541 (55%), Gaps = 50/541 (9%)
Query: 6 RNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQP 65
+NL Y ++ +L AI+ + V+II GETGCGKTTQVPQ+IL+ S G C+I+ TQP
Sbjct: 113 KNLSIYAKREEILAAINAHPVIIIKGETGCGKTTQVPQYILDEAYKS--GKYCNIVVTQP 170
Query: 66 RRISAMSVSERVASERGEKLGESVGYKVRLEGMKG-RDTRLLFCTTGILLRRLLVDRNLK 124
RRI+A+S++ RV ER + ++V L DTRLL+CTTG+LL L+ ++ L
Sbjct: 171 RRIAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNKTLT 230
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRP-ELRLVLMSATLDAELFSSYFGGATVIN 183
TH+++DEVHER N DFLLIV++ LL+ ++++LMSAT+DA+ S YF AT +
Sbjct: 231 HYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYF--ATTNS 288
Query: 184 IPGF--TYPVRTHFLEDIL-DMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAV 240
IP T R H +E D G + +N+ +D G + + +++K R +AV
Sbjct: 289 IPPVITTNHGRKHSIEKFYRDQLGSII--WNE-EDVGDQHVPEINKHGYR-------AAV 338
Query: 241 EDTLKAANFNEYSS-QTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDI 299
+ + N ++ Q+R S E R GAVL+F+ G +I
Sbjct: 339 KIIVIIDNMERKAAIQSRLSYD--------------------ETLRYGAVLIFLPGIYEI 378
Query: 300 NSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITI 359
+++ + + +VL++ C M QR +F+ P G RKI+LATNIAE+SIT+
Sbjct: 379 DTMAENITCMLENDRNIKVLIVRCFSLMTPENQRDVFNPPPPGFRKIILATNIAESSITV 438
Query: 360 NDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCVY 419
DV +VID K D ++ S L +W S + +QR GR GR++ G YR+ + Y
Sbjct: 439 PDVSYVIDFCLTKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHFY 498
Query: 420 D-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGA 478
AE+ +PE+LR PLQ+ L+ K L +G+ L+ AL P L +QN I LK +GA
Sbjct: 499 QREMAEFGIPEMLRLPLQNSVLKAKVLNMGSPMEILALALSPPNLSDIQNTILLLKEVGA 558
Query: 479 L---------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDP 529
L + +LT G +A LP++ + +++ILG IFN LE + I AGLS
Sbjct: 559 LYLTVDGVYDALDGDLTYWGTIMARLPLDTRQSRLIILGYIFNMLEEAIIIAAGLSTNGL 618
Query: 530 F 530
F
Sbjct: 619 F 619
>sp|B3P3W1|SPNE_DROER Probable ATP-dependent RNA helicase spindle-E OS=Drosophila erecta
GN=spn-E PE=3 SV=1
Length = 1432
Score = 304 bits (779), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 221/668 (33%), Positives = 341/668 (51%), Gaps = 86/668 (12%)
Query: 6 RNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQP 65
+NLP Y ++ +L AI+ + VVI+ G+TGCGKTTQVPQ+IL+ S G C+I+ TQP
Sbjct: 112 KNLPIYAKREEILAAINAHPVVILKGQTGCGKTTQVPQYILDEGYKS--GKYCNIVVTQP 169
Query: 66 RRISAMSVSERVASERGEKLGESVGYKVRLEGMKG-RDTRLLFCTTGILLRRLLVDRNLK 124
RRI+A+S++ RV ER + Y+V L DTRLL+CTTG+LL L+ + L
Sbjct: 170 RRIAAISIANRVCQEREWQQDTVCSYQVGLHRPTSLEDTRLLYCTTGVLLNNLINKKTLT 229
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRP-ELRLVLMSATLDAELFSSYFGGATVIN 183
TH+++DEVHER + DFLLIV++ LL+ ++++LMSAT+DA + YF T +
Sbjct: 230 HYTHIVLDEVHERDQDMDFLLIVVRRLLATNSRHVKIILMSATIDARELADYF--TTTNS 287
Query: 184 IPGFTYPV------RTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQ---APRKRKS 234
+P PV R H +E YR D G + WK + P+
Sbjct: 288 VP----PVITASHGRKHAIEKF-----YR-------DQMGSIR-WKEEEDDQLVPQINDH 330
Query: 235 QIASAVEDTLKAANFN-EYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFM 293
+AV+ + N E + Q+R S E R GAVL+F+
Sbjct: 331 GYRAAVKIIMVIDNMEREAAIQSRLSYD--------------------EALRYGAVLIFL 370
Query: 294 TGWDDINSLNDK----LQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLA 349
G D+I+++ + LQ++R + +V ++ C M QR +F P G RKI+L
Sbjct: 371 PGIDEIDTMAENITSMLQSDRNI----KVFIVRCFSLMTPENQRDVFHPPPPGFRKIILT 426
Query: 350 TNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGE 409
TNIAE+SIT+ DV +VID K D + S L +W S + +QR GR GR++ G
Sbjct: 427 TNIAESSITVPDVSYVIDFCLTKVLVTDTATSFSSLRLTWASKANCRQRAGRVGRLRSGR 486
Query: 410 CYRLYPRCVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQN 468
YR+ + Y AE+ +PE+LR PLQ+ L+ K L +G+ L+ AL P L +QN
Sbjct: 487 VYRMVNKSFYQREMAEFGIPEMLRMPLQNSVLRAKELEMGSPIEILALALSPPNLSDIQN 546
Query: 469 AIEYLKIIGAL---------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLT 519
I LK +GAL + ++T G ++ LP++ +L +++ILG +FN LE +
Sbjct: 547 TILLLKEVGALFLTVDGVYNAMDGDITYWGTIMSRLPLDTRLSRLIILGYVFNLLEEAII 606
Query: 520 IVAGLSVRDPFLAPMDKKDLAEAAKSQFSH------DYSDHLALVRAFEGWKD----AER 569
I AGLS+R ++ ++ + A S + H SD +A+ R + + + A
Sbjct: 607 IAAGLSMRGLYV---NEGRRTQGADSFWMHYIFADGSGSDLVAIWRVYLTYLNMVEIAHE 663
Query: 570 GLAGYEYCWKNFLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFI--RAV 627
+ + + +S S+K + L +E + GL+ + G E+ I + +
Sbjct: 664 QESAIRWAKRFHVSLRSLKEMHLLVQELRWRCTNLGLIPFAVNPSQMMGDREKSIILKVI 723
Query: 628 ICYGLYPG 635
I YP
Sbjct: 724 IAGAFYPN 731
>sp|Q8NDG6|TDRD9_HUMAN Putative ATP-dependent RNA helicase TDRD9 OS=Homo sapiens GN=TDRD9
PE=2 SV=3
Length = 1382
Score = 304 bits (778), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 221/675 (32%), Positives = 351/675 (52%), Gaps = 68/675 (10%)
Query: 7 NLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPR 66
+LP + K +++ I N VVII G TG GK+TQ+PQ+IL+ + R A CSI+ TQPR
Sbjct: 131 DLPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQ--RSAYCSIVVTQPR 188
Query: 67 RISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGV 126
+I A S++ ++ ER LG VGY+V LE + DTRL++ TTG+LL++++ ++L
Sbjct: 189 KIGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEF 248
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPE-LRLVLMSATLDAELFSSYFG-------- 177
TH+I+DEVHER DFLL+V++ LL +++VLMSAT+ + F+ YF
Sbjct: 249 THIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNKMN 308
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
A + + G + V ++L D+ + +L+P+ + + K ++A
Sbjct: 309 PAYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPH------------LLEEPVITKDIYEVA 356
Query: 238 SAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWD 297
++ + E ++ ++ ++VL ER +VLVF+ G
Sbjct: 357 VSLIQMFDDLDMKESGNK-------------AWSGAQFVL------ER-SSVLVFLPGLG 396
Query: 298 DINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
+IN +++ L + R+ + H S+A EQ +F P G RKI+L+TNIAE+S+
Sbjct: 397 EINYMHELLTSLV----HKRLQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTNIAESSV 452
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRC 417
T+ DV +VID + D N L SW S S QR+GRAGRV G CYRL +
Sbjct: 453 TVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKD 512
Query: 418 VYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
+D + ++ +PE+LR PL S L++K L +G L+ AL P L ++ I LK +
Sbjct: 513 FWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPGLSDIERTILLLKEV 572
Query: 477 GAL----------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSV 526
GAL H+ ELT LG+ LA LP+ +LGK+++LG +F CL+ L I A LS+
Sbjct: 573 GALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAALSL 632
Query: 527 RDPFLAPMDKKDLAEAAKSQFS-HDYSDHLALVRAFEGWKDA-ERGLAGY---EYCWK-- 579
++ F P + K FS SD +ALV AF+ WK + G Y E W
Sbjct: 633 KNFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAFKTWKACRQTGELRYPKDELNWGRL 692
Query: 580 NFLSAPSMKVIDSLRKEFLSLLKDTGL-VDCDTSICNA-WGRDERFIRAVICYG-LYPGI 636
N++ ++ + L +E + + + VD + + + +RFI V+ G YP
Sbjct: 693 NYIQIKRIREVAELYEELKTRISQFNMHVDSRRPVMDQEYIYKQRFILQVVLAGAFYPNY 752
Query: 637 SSIVQNGKSSSLKTM 651
+ Q + +++ +
Sbjct: 753 FTFGQPDEEMAVREL 767
>sp|Q3MHU3|TDRD9_RAT Putative ATP-dependent RNA helicase TDRD9 OS=Rattus norvegicus
GN=Tdrd9 PE=2 SV=3
Length = 1384
Score = 303 bits (777), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 223/675 (33%), Positives = 348/675 (51%), Gaps = 68/675 (10%)
Query: 7 NLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPR 66
+LP + K +++ I N VVII G TG GK+TQ+PQ++L+ + R A C+I+ TQPR
Sbjct: 133 DLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDH--YTQRSAFCNIVVTQPR 190
Query: 67 RISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGV 126
+I A S++ ++ ER LG VGY+V LE DTRL++ TTG+LL++++ ++L
Sbjct: 191 KIGASSIARWISKERSWTLGGLVGYQVGLEKTATEDTRLIYMTTGVLLQKIVSAKSLMEF 250
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPE-LRLVLMSATLDAELFSSYFG-------- 177
THV +DEVHER DFLL+V++ LL ++++LMSAT++ + F+ YF
Sbjct: 251 THVFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVILMSATINCKQFADYFAVPVQNKMN 310
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
A V + G + + ++L D+ + L PY ++ + K ++A
Sbjct: 311 PAYVFEVEGKPHTIEQYYLNDLGHIYHSGLPPY------------RLEEPVITKDVYEVA 358
Query: 238 SAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWD 297
++ + E ++T W+ G + ER +VLVF+ G
Sbjct: 359 VSLIQMFDDLDMKESGNKT------WS----GAQFV---------SER-SSVLVFLPGLG 398
Query: 298 DINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
+IN +++ L N I R+ + H S+ EQ +F P G RKI+L+TNIAE+S+
Sbjct: 399 EINYMHE-LLTNMIH---KRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTNIAESSV 454
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRC 417
T+ DV +VID + D N L SW S S QR+GRAGRV G CYRL R
Sbjct: 455 TVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIHRD 514
Query: 418 VYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
+D A ++ +PE+LR PL S L++K L +G L+ AL P L ++ I LK +
Sbjct: 515 FWDSAIPDHVVPEMLRCPLGSTVLKVKLLDMGEPRALLATALSPPSLSDIERTILLLKEV 574
Query: 477 GAL----------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSV 526
GAL H+ ELT LG+ LA LP+ +LGK+++LG +F CL+ L I A LS+
Sbjct: 575 GALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVFGCLDECLIIAAALSL 634
Query: 527 RDPFLAPMDKKDLAEAAKSQFS-HDYSDHLALVRAFEGWKDA-ERGLAGY---EYCWK-- 579
++ F P + K FS SD LALV AF W+ +RG + E W
Sbjct: 635 KNFFTMPFRQHLDGYRNKVHFSGSSRSDCLALVEAFRAWQACRQRGELRHPKDELDWGRL 694
Query: 580 NFLSAPSMKVIDSLRKEFLSLLKDTGL-VDCDTSICNA-WGRDERFIRAVICYG-LYPGI 636
N++ ++ + L +E + + + VD + + + +RFI V+ G YP
Sbjct: 695 NYIQIKRIREVAELYEELKNRISQFNMFVDPRHPVLDQEYPYKQRFILQVVLAGAFYPNY 754
Query: 637 SSIVQNGKSSSLKTM 651
+ Q + +++ +
Sbjct: 755 FTFGQPDEEMAVREL 769
>sp|Q9VF26|SPNE_DROME Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
melanogaster GN=spn-E PE=2 SV=1
Length = 1434
Score = 303 bits (777), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 219/657 (33%), Positives = 336/657 (51%), Gaps = 63/657 (9%)
Query: 6 RNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQP 65
+NL Y ++ +L AI+ + VVII GETGCGKTTQVPQ+IL+ S G C+I+ TQP
Sbjct: 113 KNLSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKS--GKYCNIVVTQP 170
Query: 66 RRISAMSVSERVASERGEKLGESVGYKVRLEGMKG-RDTRLLFCTTGILLRRLLVDRNLK 124
RRI+A+S++ RV ER + ++V L DTRLL+CTTG+LL L+ ++ L
Sbjct: 171 RRIAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNKTLT 230
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRP-ELRLVLMSATLDAELFSSYFGGATVIN 183
TH+++DEVHER N DFLLIV++ LL+ ++++LMSAT+DA+ S YF I
Sbjct: 231 HYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYFTTTNSIP 290
Query: 184 IPGFTYPVRTHFLEDIL-DMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAVED 242
T R H +E D G + +N+ +D G +++ +++K R +AV+
Sbjct: 291 PVITTNHRRKHSIEKFYRDQLGSII--WNE-EDVGHQQVPEINKHGYR-------AAVKI 340
Query: 243 TLKAANFNEYSS-QTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDINS 301
+ N ++ Q+R+S E R GAVL+F+ G +I++
Sbjct: 341 IVIIDNMERKAAIQSRQSYD--------------------EALRYGAVLIFLPGIYEIDT 380
Query: 302 LNDKLQANRILGDPT-RVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITIN 360
+ + L + DP +V ++ C M QR +F+ P G RKI+L TNIAE+SIT+
Sbjct: 381 MAENLTC-MLENDPNIKVSIVRCFSLMTPENQRDVFNPPPPGFRKIILTTNIAESSITVP 439
Query: 361 DVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCVYD 420
DV +VID AK D ++ S L +W S + +QR GR GR++ G YR+ + Y
Sbjct: 440 DVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHFYQ 499
Query: 421 -AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGAL 479
E+ +PE+LR PLQ+ L+ K L +G+ L+ AL P L + N I LK +GAL
Sbjct: 500 REMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEILALALSPPNLSDIHNTILLLKEVGAL 559
Query: 480 ---------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPF 530
+ +LT G ++ LP++ + +++ILG IFN LE + I AGLS F
Sbjct: 560 YLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIFNMLEEAIIIAAGLSTPGLF 619
Query: 531 LAPMDKKDLAEAAKSQF---SHDYSDHLALVRAF-------EGWKDAERGLAGYEYCWKN 580
+ L ++ + SD +A+ R + E D E + + +
Sbjct: 620 AHEGGRSQLGDSFWMHYIFSDGSGSDLVAIWRVYLTYLNIVENGHDQESAI---RWAKRF 676
Query: 581 FLSAPSMKVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERFI--RAVICYGLYPG 635
+S S+K I L +E GL+ + E+ I + +I YP
Sbjct: 677 HVSLRSLKEIHLLVQELRVRCTHLGLIPFPVNPNQMMDDREKAIMLKVIIAGAFYPN 733
>sp|B3M383|SPNE_DROAN Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
ananassae GN=spn-E PE=3 SV=1
Length = 1429
Score = 303 bits (776), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 198/543 (36%), Positives = 295/543 (54%), Gaps = 61/543 (11%)
Query: 6 RNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQP 65
+NLP Y ++ ++ AI+ +QVVI+ GETGCGKTTQVPQ+IL+ S G C+I+ TQP
Sbjct: 109 KNLPIYAKREVIVNAINTHQVVILKGETGCGKTTQVPQYILDEGFKS--GQYCNIVVTQP 166
Query: 66 RRISAMSVSERVASERGEKLGESVGYKVRLEGMKG-RDTRLLFCTTGILLRRLLVDRNLK 124
RRI A+S++ RV+ ER + Y+V L + DTRLL+CTTG+LL L+ ++ L
Sbjct: 167 RRIGAISIANRVSQERMWEPDTVCSYQVGLHRKQHLEDTRLLYCTTGVLLNSLIRNKTLT 226
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLSRRP-ELRLVLMSATLDAELFSSYFGGATVIN 183
TH+++DEVHER + DFLLIV++ LL+ ++++LMSAT+D F YF +T ++
Sbjct: 227 HYTHIVLDEVHERDQDMDFLLIVVRRLLATNSRHVKVILMSATIDTREFCDYF--STKVS 284
Query: 184 IPGFTYPV------RTHFLEDILDMTGYR--LTPYNQIDDYGQEKMWKMSKQAPRKRKSQ 235
+P PV R H +E YR L N DD ++ +A +
Sbjct: 285 VP----PVISASHGRKHSIEKF-----YRDQLGSINWKDDPDDGYQARIPDEAYKAAVKI 335
Query: 236 IASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTG 295
I +AAN +E S +S GAVL+F+ G
Sbjct: 336 ILVVDNMERQAANQSEQSYDDAKS--------------------------QGAVLIFLPG 369
Query: 296 WDDINSLNDKLQANRILGDPT-RVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAE 354
+I+++ + L N +P+ ++ ++ C M QR +F P SG RKI+LATNIAE
Sbjct: 370 IYEIDNMAESL-GNMTKEEPSMKLFIVRCFSLMTPDAQRDVFSPPPSGFRKIILATNIAE 428
Query: 355 TSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLY 414
+SIT+ DV +VID K D N S L +W S + +QR GR GR++ G YR+
Sbjct: 429 SSITVPDVSYVIDFCLTKVLVTDTATNFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMV 488
Query: 415 PRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYL 473
+ Y E+ +PE+LR PLQ+ L+ K L + L+ AL P L +QN I L
Sbjct: 489 HKLFYKTNMTEFGVPEMLRLPLQNSVLKAKLLDIAPPIEMLALALSPPNLSDIQNTILLL 548
Query: 474 KIIGAL---------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGL 524
K +GAL + + ++T G ++ LP++ +L +++ILG +FN LE + I AGL
Sbjct: 549 KEVGALFPTVDGEYCEVDGDITFWGIIMSRLPLDTRLSRLIILGYVFNLLEEAIVIAAGL 608
Query: 525 SVR 527
S+R
Sbjct: 609 SMR 611
>sp|B8A4F4|TDRD9_DANRE Putative ATP-dependent RNA helicase TDRD9 OS=Danio rerio GN=tdrd9
PE=2 SV=1
Length = 1342
Score = 303 bits (775), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 209/578 (36%), Positives = 310/578 (53%), Gaps = 59/578 (10%)
Query: 8 LPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPRR 67
LP K + L++ I N VVII G TG GKTTQ+PQFIL+ + R C+++ TQPR+
Sbjct: 89 LPITKNRQELVSLIENNSVVIIRGATGSGKTTQLPQFILDH--YAERNIPCNLVVTQPRK 146
Query: 68 ISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVT 127
I A S++ VA ER LG VGY+V LE M T+L++ TTG+LL++L+ + L +
Sbjct: 147 IGATSIARWVARERKCTLGSLVGYQVGLEKMATEHTKLIYVTTGVLLQKLVSSKTLTEYS 206
Query: 128 HVIVDEVHERGMNEDFLLIVLKDLL-SRRPELRLVLMSATLDAELFSSYFGG-------- 178
H+ +DEVHER DFLL+V++ LL S ++++LMSAT++ F+ YFG
Sbjct: 207 HIFIDEVHERSEELDFLLLVVRKLLRSNSRYVKVILMSATINCIEFAEYFGSPIRNQMNP 266
Query: 179 ATVINIPGFTYPVRTHFLEDILDM--TGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQI 236
A V + G Y V ++L+++ M G L D Y E+M+ ++ S I
Sbjct: 267 AYVFEVEGAPYAVEEYYLDELKTMLPVGVNLDLTLPQDPYITEEMYNVAV-------SLI 319
Query: 237 ASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGW 296
S E K +E + T ER G+VLVF+ G
Sbjct: 320 QSFDEMEAKDHRRSEQTGST------------------------THPER-GSVLVFLPGL 354
Query: 297 DDINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETS 356
+I + + L ++++ R+ + H ++ EQ +F P G RKI+L+TNIAE+S
Sbjct: 355 AEIQYMKEAL--SKLVRK--RLQVYPLHSTVTLEEQNGVFLVPVPGYRKIILSTNIAESS 410
Query: 357 ITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPR 416
+T+ DV +VID ++ + D N CL +W S S QRRGRAGRV G CYRL R
Sbjct: 411 VTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGRAGRVSKGFCYRLVTR 470
Query: 417 CVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKI 475
++ + +PE+LR+PL S L++K L +G LS AL P L ++ + LK
Sbjct: 471 HFWENEIPNFSIPEMLRSPLASTLLKVKLLDMGDPRSVLSTALTPPILGDIERTVLQLKQ 530
Query: 476 IGAL--------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVR 527
IGAL + +LT LG+ LA LP++ +LGK+++LG +F CLE L I A LS++
Sbjct: 531 IGALSVQSNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVLGHVFGCLEECLIIAASLSLK 590
Query: 528 DPFLAPMDKKDLAEAAKSQFSHDY-SDHLALVRAFEGW 564
F P ++ +K F+ + SD +A V AF+ W
Sbjct: 591 SFFAMPSLQQLAGYRSKLSFAQNVPSDFIAYVNAFKAW 628
>sp|Q14BI7|TDRD9_MOUSE Putative ATP-dependent RNA helicase TDRD9 OS=Mus musculus GN=Tdrd9
PE=1 SV=3
Length = 1383
Score = 302 bits (773), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 205/580 (35%), Positives = 310/580 (53%), Gaps = 60/580 (10%)
Query: 7 NLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQPR 66
+LP + K +++ I N VVII G TG GK+TQ+PQ++L+ + R A C+I+ TQPR
Sbjct: 133 DLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDH--YTQRSAFCNIVVTQPR 190
Query: 67 RISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGV 126
+I A S++ ++ ER LG VGY+V LE + DTRL++ TTG+LL++++ ++L
Sbjct: 191 KIGASSIARWISKERSWTLGGLVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEF 250
Query: 127 THVIVDEVHERGMNEDFLLIVLKDLLSRRPE-LRLVLMSATLDAELFSSYFG-------- 177
TH+ +DEVHER DFLL+V++ LL +++VLMSAT++ + F+ YF
Sbjct: 251 THIFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATINCKQFADYFAVPVQNKMN 310
Query: 178 GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIA 237
A V + G + + ++L D+ + Y +++ + K ++A
Sbjct: 311 PAYVFEVEGKPHAIEEYYLNDLGHI-------------YHSGLPYRLEEPVITKDVYEVA 357
Query: 238 SAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWD 297
++ + E ++T W+ G + ER +VLVF+ G
Sbjct: 358 VSLIQMFDDLDMKESGNKT------WS----GAQFV---------SER-SSVLVFLPGLG 397
Query: 298 DINSLNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSI 357
+IN +++ L N I R+ + H S+ EQ +F P G RKI+L+TNIAE+S+
Sbjct: 398 EINYMHE-LLTNMIH---KRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTNIAESSV 453
Query: 358 TINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRC 417
T+ DV +VID + D N L SW S S QR+GRAGRV G CYRL PR
Sbjct: 454 TVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIPRD 513
Query: 418 VYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKII 476
+D A ++ +PE+LR PL S L++K L +G L+ AL P L ++ I LK +
Sbjct: 514 FWDSAIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPSLSDIERTILLLKEV 573
Query: 477 GAL----------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSV 526
GAL H+ ELT LG+ LA LP+ +LGK+++LG +F CL+ L I A LS+
Sbjct: 574 GALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLVVLGHVFGCLDECLIIAAALSL 633
Query: 527 RDPFLAPMDKKDLAEAAKSQFS-HDYSDHLALVRAFEGWK 565
++ F P + K FS SD LALV AF W+
Sbjct: 634 KNFFTMPFRQHLDGYRNKVHFSGSSRSDCLALVEAFRAWQ 673
>sp|B0XDC4|SPNE_CULQU Probable ATP-dependent RNA helicase spindle-E OS=Culex
quinquefasciatus GN=spn-E PE=3 SV=1
Length = 1396
Score = 301 bits (772), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 217/665 (32%), Positives = 344/665 (51%), Gaps = 82/665 (12%)
Query: 5 RRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQ 64
+ +LP K +L I N VV++ G TGCGKTTQVPQ++LE R C+II TQ
Sbjct: 55 KNDLPINWNKPEILDKIRSNAVVVLQGATGCGKTTQVPQYLLEEAFE--RKEYCNIIVTQ 112
Query: 65 PRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLK 124
PR+I+A+S++ RVA ER LG VGYKV L+ DTRLL+ TTG+LL+ L+ + +
Sbjct: 113 PRKIAAISIARRVAQERKCDLGTLVGYKVGLKEQHNEDTRLLYVTTGVLLQSLINSKTMA 172
Query: 125 GVTHVIVDEVHERGMNEDFLLIVLKDLLS-RRPELRLVLMSATLDAELFSSYFG------ 177
THVI+DEVHER ++ DFLLIV++ LLS + +++LMSAT+DA+ FS YF
Sbjct: 173 TYTHVILDEVHEREVDMDFLLIVVRRLLSTNSKKTKVILMSATIDAKGFSEYFKIPKKSG 232
Query: 178 --GATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYG---QEKMWKMSKQAPRKR 232
A VI++ V F D L+ +L QID E+M+ ++ +
Sbjct: 233 YLSAPVISVERPRLHVVQEFYFDDLE----KLKVDFQIDYEAPGISEQMYNIAAK----- 283
Query: 233 KSQIASAVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVF 292
V D LK F + +EY +P ++++F
Sbjct: 284 ----LVVVCDHLKGQEFGDS--------------------LEY---------KP-SIIIF 309
Query: 293 MTGWDDINSLN---DKLQAN-RILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVL 348
+ G ++I + +KL A+ + +L++ H ++ + +Q +F +P RK++L
Sbjct: 310 LPGINEIEKMEGALEKLIASIQNAAQRPNLLIMKLHSTLPADDQTAVFRKPGPNQRKVIL 369
Query: 349 ATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPG 408
+TNIAE+SIT+ D+ FVID + D L N S L W S + QR GRAGR+ G
Sbjct: 370 STNIAESSITVPDIKFVIDFCLQRILVTDTLTNFSTLRTEWASKSNCIQRAGRAGRLMSG 429
Query: 409 ECYRLYPRCVYDAFAEYQL-PEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQ 467
YRL R ++ + PEILR PL+++ L+ K L +GT L+ A+ P L ++
Sbjct: 430 RVYRLVDRRFFENNMDVSTSPEILRCPLETVVLKAKLLEMGTPPSILALAMAPPNLDDIR 489
Query: 468 NAIEYLKIIGAL------DHNE---ELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVL 518
N I LK +GA+ ++++ +LT LG+ ++ LP++ ++ K+++LG IF+ +E +
Sbjct: 490 NTILLLKEVGAMLRTVKGNYDQLDGDLTYLGRIMSKLPLDIRISKLIMLGYIFSVMEEAV 549
Query: 519 TIVAGLSVRDPFLAPMDKKDLAEAAKSQFSHD--YSDHLALVRAFEGWKDAER--GLAGY 574
TI AG++V++ FL ++ + ++ + D SD +A++ A+ WK + G
Sbjct: 550 TIGAGMNVKNIFL---NQNSVKTYSQKMYWADGSGSDAIAILNAYTAWKSRQEQAGDTAD 606
Query: 575 EYCWKNFLSAPSMKVID--SLRKEFLSLLKDTGLVDCDTSICNAWGRDER--FIRAVICY 630
Y W +S +ID L E L +GL W E+ ++ ++
Sbjct: 607 MYNWARRMSLDRKSLIDMAELIHEVKDRLNRSGLKPVSGPNRVVWNAREKTVILKVILAG 666
Query: 631 GLYPG 635
YP
Sbjct: 667 AFYPN 671
>sp|B4GEU5|SPNE_DROPE Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
persimilis GN=spn-E PE=3 SV=1
Length = 1434
Score = 301 bits (771), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 191/545 (35%), Positives = 296/545 (54%), Gaps = 56/545 (10%)
Query: 6 RNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSIICTQP 65
++LP Y ++ ++ AI++N VVI+ GETGCGKTTQVP + ++ + C+I+ TQP
Sbjct: 114 KSLPIYAKREEIINAINENPVVIVKGETGCGKTTQVPPILFWMMVSKAK-QYCNIVVTQP 172
Query: 66 RRISAMSVSERVASERGEKLGESVGYKVRLEGMKGR--DTRLLFCTTGILLRRLLVDRNL 123
RRI+A+S++ RV ER + G GY+V L R DTRLL+CTTG+LL L+ ++ L
Sbjct: 173 RRIAAISIANRVCQERQWQPGTVCGYQVGLHRQLERFADTRLLYCTTGVLLNILVNNKTL 232
Query: 124 KGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRP-ELRLVLMSATLDAELFSSYFGGATVI 182
TH+++DEVHERG DFLLIV++ LL+ ++++LMSAT++ S YF +
Sbjct: 233 THYTHIVLDEVHERGQEMDFLLIVIRRLLATNSRHVKVILMSATINPRELSDYFANES-- 290
Query: 183 NIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQ---APRKRKSQIASA 239
+ P PV I G T D Q W+ ++ +P + SA
Sbjct: 291 SAP----PV-------IAASYGRNFTVEKYYRDQLQSINWEGHQEDINSPGITQEGYRSA 339
Query: 240 VEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDI 299
++ L N T +S + + R G++L+F+ G +I
Sbjct: 340 IKTILVIDNMERNERGTGKSYN--------------------QSLREGSILIFLPGVGEI 379
Query: 300 NSLNDKLQ--ANRILGDPT-RVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETS 356
N+++D L+ AN DP + ++ CH M S +QR IF G RKI++ATN+AE+S
Sbjct: 380 NNMSDMLKDMANH---DPIMKFNMVRCHSLMTSEDQREIFQPSPPGYRKIIMATNVAESS 436
Query: 357 ITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPR 416
IT+ DV ++ID K D N S L +W S + +QR GR GR++ G YR+ +
Sbjct: 437 ITVPDVSYIIDFCLEKVLVTDTSTNFSSLRLAWASKTNCRQRAGRVGRLRNGRVYRMVTK 496
Query: 417 CVYD-AFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKI 475
Y +EY +PE+LR+PLQ+ L+ K L++GT L+ AL P L + N I LK
Sbjct: 497 SFYQRELSEYSVPEMLRSPLQNCVLKAKELKMGTPVEMLALALSPPNLSDICNTILMLKE 556
Query: 476 IGAL---------DHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSV 526
+GAL + ++T G ++ LP++ L +++ILG +FN ++ + I AGL+V
Sbjct: 557 VGALFPTMDGTYDPRDGDITYWGTIMSKLPLDTHLSRLIILGYVFNLVDEAIIIAAGLTV 616
Query: 527 RDPFL 531
R ++
Sbjct: 617 RGIYI 621
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 300 bits (767), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 207/654 (31%), Positives = 329/654 (50%), Gaps = 87/654 (13%)
Query: 1 MLEFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILESEITSVRGAVCSI 60
+LE R+ LP + + LLT I N +VI+ GETG GKTTQ+ Q++ E T I
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDY----GMI 580
Query: 61 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVD 120
CTQPRR++AMSV++RV+ E G LGE VGY +R E T + + T GILLR L +
Sbjct: 581 GCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLRE 640
Query: 121 RNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGGAT 180
+L + +I+DE HER +N D L +L+++++RR +L+L++ SAT+DAE F+S+FG
Sbjct: 641 ADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVP 700
Query: 181 VINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIASAV 240
+ +IPG T+PV DIL + TP +DY + +AV
Sbjct: 701 IFHIPGRTFPV------DIL----FSKTPQ---EDY-------------------VEAAV 728
Query: 241 EDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDDIN 300
+ +L+ LS D + F M G +DI
Sbjct: 729 KQSLQV------------HLSGAPGDILIF----------------------MPGQEDIE 754
Query: 301 SLNDKLQAN-RILGDPTRVLLLTCHGSMASSEQRLIFDEPESGVRKIVLATNIAETSITI 359
+D++ + L + + +L + + S Q IF + GVRK ++ATNIAETS+T+
Sbjct: 755 VTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTV 814
Query: 360 NDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPGECYRLYPRCVY 419
+ ++FVID G K ++ L IS +A QR GRAGR PG+C+RLY + Y
Sbjct: 815 DGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAY 874
Query: 420 -DAFAEYQLPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQNAIEYLKIIGA 478
+ +PEI RT L ++ L +KSL + + F + P + N++ L I+GA
Sbjct: 875 KNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPEDNMLNSMYQLWILGA 932
Query: 479 LDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVRDPFLAPMDKKD 538
LD+ LT G+ + P++P L KMLI+ C +L IV+ LSV F P +++
Sbjct: 933 LDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREE 992
Query: 539 LAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSMKVIDSLRKEFL 598
++ + +F+ SDHL+ + + WK+ +C +F+ A +M+ + +R +
Sbjct: 993 ESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTI---WCNDHFIHAKAMRKVREVRAQLK 1049
Query: 599 SLL--KDTGLVDCDTSICNAWGRDERFIRAVICYGLYPGISSIVQNGKSSSLKT 650
++ + L C G D +R IC + + + G+ +++T
Sbjct: 1050 DIMVQQRMSLASC--------GTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRT 1095
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 296 bits (757), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 221/714 (30%), Positives = 354/714 (49%), Gaps = 97/714 (13%)
Query: 3 EFRRNLPAYKEKNRLLTAISQNQVVIISGETGCGKTTQVPQFILE----SEITSVRGAVC 58
E R LP ++ K + + + NQ + + GETG GKTTQ+PQ+ +E + G
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 59 SIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLL 118
+ CTQPRR++AMSV+ RVA E LG+ VGY +R E T L +CT G+LLR +
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAM 190
Query: 119 VDRNLKGVTHVIVDEVHERGMNEDFLLIVLKDLLSRRPELRLVLMSATLDAELFSSYFGG 178
L +I+DE HER + D L+ ++K+++ R ++++V+MSATLDA F YF
Sbjct: 191 NSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFE- 249
Query: 179 ATVINIPGFTYPVRTHFLEDILDMTGYRLTPYNQIDDYGQEKMWKMSKQAPRKRKSQIAS 238
+ P + P RT F +I TP +
Sbjct: 250 ----DCPLLSVPGRT-FPVEIF------FTP----------------------------N 270
Query: 239 AVEDTLKAANFNEYSSQTRESLSCWNPDCIGFNLIEYVLCYICEKERPGAVLVFMTGWDD 298
A +D L+AA I V+ +E G +L+F+TG ++
Sbjct: 271 AEKDYLEAA-------------------------IRTVIQIHMVEEVEGDILLFLTGQEE 305
Query: 299 INS----LNDKLQANRILGDPTRVLLLTCHGSMASSEQRLIFD-----EPESGV-RKIVL 348
I ++ ++QA + D + + + ++ + Q+ IF+ P + RK V+
Sbjct: 306 IEEACKRIDREIQA--LGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVI 363
Query: 349 ATNIAETSITINDVVFVIDCGKAKETSYDALNNTSCLLPSWISTVSAQQRRGRAGRVQPG 408
+TNIAETS+TI+ VVFVID G +K+ Y+ LL IS SA QR GRAGR +PG
Sbjct: 364 STNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPG 423
Query: 409 ECYRLYPRCVYDAFAEYQ-LPEILRTPLQSLCLQIKSLRLGTIAGFLSRALQSPELLAVQ 467
+C+RLY Y + + Q PEILR+ L S+ LQ+K L + F +PE L
Sbjct: 424 KCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETL--M 481
Query: 468 NAIEYLKIIGALDHNEELTVLGQYLAMLPMEPKLGKMLILGAIFNCLEPVLTIVAGLSVR 527
A+E L + A++ + ELT LG +A P++P+L KMLI NC +L+I A LSV
Sbjct: 482 RALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVP 541
Query: 528 DPFLAPMDKKDLAEAAKSQFSHDYSDHLALVRAFEGWKDAERGLAGYEYCWKNFLSAPSM 587
++ P + + A+ AK++F+H DHL L+ + +K + ++C+ NF++ +M
Sbjct: 542 QCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDP---QWCYDNFINYRTM 598
Query: 588 KVIDSLRKEFLSLLKDTGLVDCDTSICNAWGRDERF-IRAVICYGLYPGISSIVQNGKSS 646
K D++R + ++ L T + RD IR + G + ++ + ++G
Sbjct: 599 KTADTVRTQLSRVMDKYNLRRVSTDFKS---RDYYLNIRKALVAGFFMQVAHLERSGHYV 655
Query: 647 SLKTMEDGQVFLYSNSVNARESEIPYPWLVFNEKMKVNSVFLKDSTAVSDSVLL 700
++K ++ V L+ ++V + E W ++NE + F++ T V LL
Sbjct: 656 TVK--DNQLVNLHPSTVLDHKPE----WALYNEFVLTTKNFIRTVTDVRPEWLL 703
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 323,541,627
Number of Sequences: 539616
Number of extensions: 13460703
Number of successful extensions: 37036
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 36162
Number of HSP's gapped (non-prelim): 431
length of query: 901
length of database: 191,569,459
effective HSP length: 127
effective length of query: 774
effective length of database: 123,038,227
effective search space: 95231587698
effective search space used: 95231587698
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)