Query 046398
Match_columns 794
No_of_seqs 1020 out of 5592
Neff 9.8
Searched_HMMs 13730
Date Mon Mar 25 20:37:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046398.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046398hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 8.4E-40 6.1E-44 343.0 14.5 294 30-387 2-303 (313)
2 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 3.5E-31 2.5E-35 276.9 18.7 260 375-722 50-313 (313)
3 d2omza2 c.10.2.1 (A:33-416) In 99.9 1.3E-25 9.8E-30 241.6 32.2 353 102-546 31-383 (384)
4 d2omza2 c.10.2.1 (A:33-416) In 99.9 2.4E-25 1.8E-29 239.5 30.9 78 605-688 306-383 (384)
5 d1xkua_ c.10.2.7 (A:) Decorin 99.9 1.2E-23 8.7E-28 218.3 27.6 274 304-696 11-291 (305)
6 d1xkua_ c.10.2.7 (A:) Decorin 99.9 4.8E-23 3.5E-27 213.7 26.4 253 108-412 24-284 (305)
7 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 5.1E-23 3.7E-27 210.9 19.9 167 482-696 100-266 (284)
8 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 1E-22 7.6E-27 208.6 18.2 165 483-694 76-241 (284)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.9 3.9E-21 2.8E-25 194.5 19.7 200 425-693 11-210 (266)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.8 2E-20 1.5E-24 189.1 19.4 178 425-668 32-209 (266)
11 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 2.9E-17 2.1E-21 173.3 34.6 138 117-287 38-175 (353)
12 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 2.9E-17 2.1E-21 173.3 27.9 303 304-696 39-341 (353)
13 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.7 2.9E-20 2.1E-24 204.2 -1.2 197 445-694 223-442 (460)
14 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.7 5.4E-21 3.9E-25 210.2 -8.5 399 118-555 3-445 (460)
15 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 3.6E-17 2.6E-21 155.9 11.3 169 490-711 11-180 (192)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 3.9E-16 2.8E-20 153.2 18.1 185 425-687 42-226 (227)
17 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 1.7E-16 1.2E-20 157.7 15.0 73 330-405 11-83 (242)
18 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 4.9E-16 3.6E-20 152.5 17.6 191 112-360 36-226 (227)
19 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 9.9E-17 7.2E-21 152.8 11.3 178 450-695 10-187 (192)
20 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 1E-16 7.4E-21 159.3 10.6 197 201-403 30-228 (242)
21 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 2.9E-15 2.1E-19 144.6 17.2 165 447-687 45-209 (210)
22 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 2.9E-15 2.1E-19 144.7 15.9 163 425-663 47-209 (210)
23 d2omxa2 c.10.2.1 (A:37-235) In 99.6 4.2E-15 3E-19 142.3 15.8 162 446-683 38-199 (199)
24 d2omxa2 c.10.2.1 (A:37-235) In 99.6 1.4E-14 1E-18 138.4 16.2 160 100-286 25-184 (199)
25 d2astb2 c.10.1.3 (B:2136-2419) 99.5 8.1E-15 5.9E-19 148.6 9.4 180 201-385 47-235 (284)
26 d2astb2 c.10.1.3 (B:2136-2419) 99.5 1.1E-14 7.7E-19 147.8 9.1 59 606-664 175-235 (284)
27 d1dcea3 c.10.2.2 (A:444-567) R 99.5 7.3E-14 5.4E-18 121.5 9.9 102 120-237 1-103 (124)
28 d1dcea3 c.10.2.2 (A:444-567) R 99.4 3.3E-13 2.4E-17 117.3 11.8 82 609-693 23-105 (124)
29 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 2.3E-13 1.7E-17 124.5 11.2 64 483-550 14-77 (162)
30 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.4 1.8E-14 1.3E-18 150.9 3.6 261 367-693 23-317 (344)
31 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 2E-13 1.5E-17 124.9 9.7 126 510-685 16-146 (162)
32 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.4 2.7E-14 2E-18 149.5 0.5 99 111-236 25-133 (344)
33 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 2.8E-13 2E-17 128.6 0.8 142 489-684 25-180 (198)
34 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 1E-12 7.4E-17 124.6 0.2 135 479-667 40-185 (198)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 99.1 6.8E-11 5E-15 107.0 10.5 58 609-667 59-116 (156)
36 d2ifga3 c.10.2.7 (A:36-191) Hi 99.1 1.2E-10 8.5E-15 105.4 11.2 85 607-692 32-117 (156)
37 d1koha1 c.10.2.3 (A:201-362) m 98.2 3.6E-08 2.6E-12 89.3 -1.8 124 118-255 23-152 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 98.2 5.1E-08 3.7E-12 88.3 -1.2 80 605-684 64-152 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.5 3.4E-05 2.5E-09 69.4 4.9 63 627-689 69-142 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.4 3.4E-05 2.5E-09 69.5 3.5 60 607-666 73-143 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 96.6 0.0003 2.2E-08 62.9 2.3 18 532-549 42-59 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 96.6 0.00055 4E-08 61.1 3.9 87 605-691 45-145 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00 E-value=8.4e-40 Score=343.02 Aligned_cols=294 Identities=31% Similarity=0.519 Sum_probs=231.9
Q ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcc--eeeeEecCCC--CcEEEEEcCCCCCccccccchhhhhcccccc
Q 046398 30 GCTDSEREALLKLKQDLKDPSNRLGSWVVDGDCCK--WAEVVCSNLT--GHVLQLSLRNPFRNDLRYATTEYEDYMRSML 105 (794)
Q Consensus 30 ~~~~~~~~~ll~~k~~~~~~~~~~~~W~~~~~~c~--w~gv~c~~~~--~~v~~L~l~~~~~~~~~~~~~~~~~~~~~~l 105 (794)
-|.++||+||++||+++.+|. .+++|..++|||. |.||+|+..+ +||++|+|++. .+
T Consensus 2 ~c~~~e~~aLl~~k~~~~~~~-~l~sW~~~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~------------------~l 62 (313)
T d1ogqa_ 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGL------------------NL 62 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECC------------------CC
T ss_pred CCCHHHHHHHHHHHHHCCCCC-cCCCCCCCCCCCCCcCCCeEEeCCCCcEEEEEEECCCC------------------CC
Confidence 499999999999999999874 6899988899994 9999998643 48999999984 56
Q ss_pred ce--eecccccCCCCCCEEeCCC-CCCCCCCCCcccCCCCCCCEEEcCCCCCCCCCcccccCCccccccccCcccccccc
Q 046398 106 SG--NVNPSLVDLKHLTHLDLSG-NDFQGIRIPKYLGSLKNLRYLNLSGAEFAGIIPHQLGNLSNLRCLDLSWSEYALQV 182 (794)
Q Consensus 106 ~g--~~~~~l~~l~~L~~L~Ls~-n~l~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~~~~~~~~ 182 (794)
+| .+|+.++++++|++|+|++ |++++. +|+.|+++++|++|+|++|++.+..|..+..+.+|+++++++|.
T Consensus 63 ~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~-iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~----- 136 (313)
T d1ogqa_ 63 PKPYPIPSSLANLPYLNFLYIGGINNLVGP-IPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNA----- 136 (313)
T ss_dssp SSCEECCGGGGGCTTCSEEEEEEETTEESC-CCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSE-----
T ss_pred CCCCCCChHHhcCccccccccccccccccc-cccccccccccchhhhccccccccccccccchhhhccccccccc-----
Confidence 66 5789999999999999986 788874 89999999999999999999998888889999999999998776
Q ss_pred ccccccccCCCCccCCCCCCCEEECcCCCCCCCCCccccCCCCC-CeEeeeccCCCCCCCccccCCCCCCcEEEccCCCC
Q 046398 183 HSFSWLSGQIPNRLGNLTSLRHLDLSANKFNSTTAGWLSKFNHL-EFLSLSSNGLQGTISSIGLENLTSIKTIDLSLNFE 261 (794)
Q Consensus 183 ~~~~~~~~~lp~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L-~~L~L~~n~l~~~i~~~~l~~l~~L~~L~L~~~~~ 261 (794)
..+.+|..+.++++|+++++++|.+.+.+|..+..+.++ +.+++++|++++..+. .+.++..+ .++++ .+.
T Consensus 137 -----~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~-~~~~l~~~-~l~l~-~~~ 208 (313)
T d1ogqa_ 137 -----LSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPP-TFANLNLA-FVDLS-RNM 208 (313)
T ss_dssp -----EESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCG-GGGGCCCS-EEECC-SSE
T ss_pred -----ccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccc-cccccccc-ccccc-ccc
Confidence 345778888889999999999998888888888777765 7788888877766555 44444333 45554 334
Q ss_pred CCCCCchhhhccCCCCEEEccCCCCCcchHHHHHhhhhcCcCCccEEEeecccccccccccccCCCCCCEEEccCCcCcC
Q 046398 262 LGGPIPTSFVRLCELTSIDVSDVKLSQDLSQVLDILSACGASALESLVFSSSQISGHLTSQLGQFKSLRTLSLDDNCISG 341 (794)
Q Consensus 262 ~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~l~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 341 (794)
..+.+|..+..++ +++.+++++|.+.+.++ .+..+++|+.|++++|+++|
T Consensus 209 ~~~~~~~~~~~~~-----------------------------~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g 258 (313)
T d1ogqa_ 209 LEGDASVLFGSDK-----------------------------NTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYG 258 (313)
T ss_dssp EEECCGGGCCTTS-----------------------------CCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEE
T ss_pred ccccccccccccc-----------------------------ccccccccccccccccc-ccccccccccccCccCeecc
Confidence 4444444444444 55555555565555444 46677888888888888888
Q ss_pred CCCCCcCCCCCCCEEEccCCcccccCCccccCCCCCCeEeccCccc
Q 046398 342 PLPPALGDLSSLTRLDLSRNMLNGSIPLSLGKISHLEYLDLSNNKM 387 (794)
Q Consensus 342 ~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 387 (794)
.+|.+++++++|++|+|++|+++|.+|. ++++++|+.+++++|+.
T Consensus 259 ~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~~ 303 (313)
T d1ogqa_ 259 TLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKC 303 (313)
T ss_dssp CCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSSE
T ss_pred cCChHHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCcc
Confidence 8888888888888888888888888874 57788888888888873
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.97 E-value=3.5e-31 Score=276.93 Aligned_cols=260 Identities=27% Similarity=0.489 Sum_probs=213.5
Q ss_pred CCCCeEeccCcccccc--cChhhhcCCCCCCEEECcCCcceeEcCCCCcCccccceEecccccCCCCCCcccCCCCCCCE
Q 046398 375 SHLEYLDLSNNKMNGT--LSEIHFVNLTKLTWFSASGNSLILQVNPNWVPPFQLKTLLLMSCHLGPQFPSWLHSQKNLSV 452 (794)
Q Consensus 375 ~~L~~L~Ls~N~l~~~--~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 452 (794)
.+++.|+|++|.+.|. +|. .+.++++|++|+++++ |.+.+.+|..+.++++|++
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~-~l~~L~~L~~L~Ls~~-----------------------N~l~g~iP~~i~~L~~L~~ 105 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPS-SLANLPYLNFLYIGGI-----------------------NNLVGPIPPAIAKLTQLHY 105 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCG-GGGGCTTCSEEEEEEE-----------------------TTEESCCCGGGGGCTTCSE
T ss_pred EEEEEEECCCCCCCCCCCCCh-HHhcCccccccccccc-----------------------cccccccccccccccccch
Confidence 3577777777777653 344 4555555555555431 3445567777888888888
Q ss_pred EeccCCCCCCCcchhHHhccccceeccCcccCCCCCCCEEEccCCcccccCChhhhhcCCCCcEEEcccccccccCCccc
Q 046398 453 LDISNARISDTIPRWFWNSIFQLSGIIPESFKNFSNLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQL 532 (794)
Q Consensus 453 L~Ls~n~l~~~~p~~~~~~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~~ 532 (794)
|++++|++.+ ..+..+..+++|+.+++++|++.+.+|..+. .++.++.+++++|.+.+.+|..+
T Consensus 106 L~Ls~N~l~~---------------~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~-~l~~L~~l~l~~n~l~~~ip~~~ 169 (313)
T d1ogqa_ 106 LYITHTNVSG---------------AIPDFLSQIKTLVTLDFSYNALSGTLPPSIS-SLPNLVGITFDGNRISGAIPDSY 169 (313)
T ss_dssp EEEEEECCEE---------------ECCGGGGGCTTCCEEECCSSEEESCCCGGGG-GCTTCCEEECCSSCCEEECCGGG
T ss_pred hhhccccccc---------------cccccccchhhhcccccccccccccCchhhc-cCcccceeecccccccccccccc
Confidence 8888887665 3555677788888899998888888888776 68889999999998888888888
Q ss_pred cCCCCC-CEEEccCCcCcccCCchhhccccccccccccCCCCcccccccccccccceeeEEEEeccchhhcccccceeEE
Q 046398 533 CRLTSL-QILDVANNSLSGTMPGCVNNFSAMATIDSSHQSNAMSYFEVTAYDCEVLEDASIVMKGSMVEYNSILNLVRII 611 (794)
Q Consensus 533 ~~l~~L-~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~~L 611 (794)
..+..+ +.+++++|++++..|..+.++.. ..+
T Consensus 170 ~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~-----------------------------------------------~~l 202 (313)
T d1ogqa_ 170 GSFSKLFTSMTISRNRLTGKIPPTFANLNL-----------------------------------------------AFV 202 (313)
T ss_dssp GCCCTTCCEEECCSSEEEEECCGGGGGCCC-----------------------------------------------SEE
T ss_pred cccccccccccccccccccccccccccccc-----------------------------------------------ccc
Confidence 887776 88889999988888776654321 468
Q ss_pred EcCCCccccccChhhhcccCCCEEecccccccccCCccccccCCCCEEeCCCCcCcccCcccccCCCCCCEEeCcCCccc
Q 046398 612 DVSKNNFSGEIPMELTYLRGLQSLNLSHNIFTGQIPENIGNLISIESLDFSTNQLSSKISQSMSSLSFLNHLNVSNNLLT 691 (794)
Q Consensus 612 dLs~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 691 (794)
+++++...+.+|..+..+++++.+++++|.+++.+| .++.+++|+.|+|++|+++|.+|+.++++++|++|||++|+|+
T Consensus 203 ~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~ 281 (313)
T d1ogqa_ 203 DLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281 (313)
T ss_dssp ECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEE
T ss_pred cccccccccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCccc
Confidence 999999999999999999999999999999997765 5899999999999999999999999999999999999999999
Q ss_pred ccCCCCCccCccCcccccCC-CcCCCCCCCCC
Q 046398 692 GKIPSSTQLQSFDASCFVGN-NLCGPPLPSCT 722 (794)
Q Consensus 692 g~iP~~~~~~~~~~~~~~gn-~lcg~~~~~c~ 722 (794)
|+||+.+.++.++...+.|| .|||.|++.|.
T Consensus 282 g~iP~~~~L~~L~~l~l~~N~~l~g~plp~c~ 313 (313)
T d1ogqa_ 282 GEIPQGGNLQRFDVSAYANNKCLCGSPLPACT 313 (313)
T ss_dssp EECCCSTTGGGSCGGGTCSSSEEESTTSSCCC
T ss_pred ccCCCcccCCCCCHHHhCCCccccCCCCCCCC
Confidence 99999989999999999999 79999988773
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.94 E-value=1.3e-25 Score=241.57 Aligned_cols=353 Identities=27% Similarity=0.343 Sum_probs=210.4
Q ss_pred ccccceeecccccCCCCCCEEeCCCCCCCCCCCCcccCCCCCCCEEEcCCCCCCCCCcccccCCccccccccCccccccc
Q 046398 102 RSMLSGNVNPSLVDLKHLTHLDLSGNDFQGIRIPKYLGSLKNLRYLNLSGAEFAGIIPHQLGNLSNLRCLDLSWSEYALQ 181 (794)
Q Consensus 102 ~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~~~~~~~ 181 (794)
...+++.+. ...+.+|++|+++++.++. + +.+..+++|++|++++|++++. | .++++++|++|++++|.+.
T Consensus 31 ~~~~~~~~~--~~~l~~l~~L~l~~~~I~~--l-~gl~~L~nL~~L~Ls~N~l~~l-~-~l~~L~~L~~L~L~~n~i~-- 101 (384)
T d2omza2 31 KTNVTDTVS--QTDLDQVTTLQADRLGIKS--I-DGVEYLNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQIA-- 101 (384)
T ss_dssp CSSTTSEEC--HHHHTTCCEEECCSSCCCC--C-TTGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCC--
T ss_pred CCCCCCccC--HHHhCCCCEEECCCCCCCC--c-cccccCCCCCEEeCcCCcCCCC-c-cccCCcccccccccccccc--
Confidence 345555543 3577899999999999984 3 4578899999999999999854 4 3899999999999988754
Q ss_pred cccccccccCCCCccCCCCCCCEEECcCCCCCCCCCccccCCCCCCeEeeeccCCCCCCCccccCCCCCCcEEEccCCCC
Q 046398 182 VHSFSWLSGQIPNRLGNLTSLRHLDLSANKFNSTTAGWLSKFNHLEFLSLSSNGLQGTISSIGLENLTSIKTIDLSLNFE 261 (794)
Q Consensus 182 ~~~~~~~~~~lp~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~i~~~~l~~l~~L~~L~L~~~~~ 261 (794)
.++ .++++++|+.|+++++.+++..+ ......+..+....|.+...... ..............
T Consensus 102 ---------~i~-~l~~l~~L~~L~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~---- 164 (384)
T d2omza2 102 ---------DIT-PLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISAL-SGLTSLQQLSFGNQ---- 164 (384)
T ss_dssp ---------CCG-GGTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGG-TTCTTCSEEEEEES----
T ss_pred ---------ccc-ccccccccccccccccccccccc--ccccccccccccccccccccccc-cccccccccccccc----
Confidence 233 47889999999999998876654 44556777777777765432211 11111111111111
Q ss_pred CCCCCchhhhccCCCCEEEccCCCCCcchHHHHHhhhhcCcCCccEEEeecccccccccccccCCCCCCEEEccCCcCcC
Q 046398 262 LGGPIPTSFVRLCELTSIDVSDVKLSQDLSQVLDILSACGASALESLVFSSSQISGHLTSQLGQFKSLRTLSLDDNCISG 341 (794)
Q Consensus 262 ~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~l~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 341 (794)
......+.............+..... ..... +++++.+++++|.+++..+ +..+++|++|++++|.++.
T Consensus 165 --~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~ 233 (384)
T d2omza2 165 --VTDLKPLANLTTLERLDISSNKVSDI--SVLAK-----LTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD 233 (384)
T ss_dssp --CCCCGGGTTCTTCCEEECCSSCCCCC--GGGGG-----CTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred --cchhhhhccccccccccccccccccc--ccccc-----ccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC
Confidence 11122233333333333333332211 11111 1244555555554444332 2334455555555555542
Q ss_pred CCCCCcCCCCCCCEEEccCCcccccCCccccCCCCCCeEeccCcccccccChhhhcCCCCCCEEECcCCcceeEcCCCCc
Q 046398 342 PLPPALGDLSSLTRLDLSRNMLNGSIPLSLGKISHLEYLDLSNNKMNGTLSEIHFVNLTKLTWFSASGNSLILQVNPNWV 421 (794)
Q Consensus 342 ~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~ 421 (794)
. ..+..+++|+.|++++|.+++..+ ++.+++|++|++++|++.+. + .+..++
T Consensus 234 ~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~-~--~~~~~~--------------------- 285 (384)
T d2omza2 234 I--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-S--PLAGLT--------------------- 285 (384)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-G--GGTTCT---------------------
T ss_pred c--chhhcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCC-C--cccccc---------------------
Confidence 1 234444555555555555543221 44445555555555554421 1 133333
Q ss_pred CccccceEecccccCCCCCCcccCCCCCCCEEeccCCCCCCCcchhHHhccccceeccCcccCCCCCCCEEEccCCcccc
Q 046398 422 PPFQLKTLLLMSCHLGPQFPSWLHSQKNLSVLDISNARISDTIPRWFWNSIFQLSGIIPESFKNFSNLEVLNLGDNEFVG 501 (794)
Q Consensus 422 ~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~ 501 (794)
.++.+.+..|.+.+ ...+..+++++.|++++|++++. + .+..+++|++|++++|+++
T Consensus 286 ---~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~l----------------~-~l~~l~~L~~L~L~~n~l~- 342 (384)
T d2omza2 286 ---ALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDI----------------S-PVSSLTKLQRLFFANNKVS- 342 (384)
T ss_dssp ---TCSEEECCSSCCSC--CGGGGGCTTCSEEECCSSCCSCC----------------G-GGGGCTTCCEEECCSSCCC-
T ss_pred ---cccccccccccccc--ccccchhcccCeEECCCCCCCCC----------------c-ccccCCCCCEEECCCCCCC-
Confidence 44444444444443 22356677888888888888762 2 2567888999999999887
Q ss_pred cCChhhhhcCCCCcEEEcccccccccCCccccCCCCCCEEEccCC
Q 046398 502 KIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANN 546 (794)
Q Consensus 502 ~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 546 (794)
.++ .+. .+++|++|++++|++++..| +.++++|+.|+|++|
T Consensus 343 ~l~-~l~-~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 343 DVS-SLA-NLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp CCG-GGG-GCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CCh-hHc-CCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 455 344 68899999999998887654 788889999999887
No 4
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.94 E-value=2.4e-25 Score=239.51 Aligned_cols=78 Identities=23% Similarity=0.336 Sum_probs=65.4
Q ss_pred ccceeEEEcCCCccccccChhhhcccCCCEEecccccccccCCccccccCCCCEEeCCCCcCcccCcccccCCCCCCEEe
Q 046398 605 LNLVRIIDVSKNNFSGEIPMELTYLRGLQSLNLSHNIFTGQIPENIGNLISIESLDFSTNQLSSKISQSMSSLSFLNHLN 684 (794)
Q Consensus 605 l~~L~~LdLs~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 684 (794)
++.++.|++++|++++.. .+..+++|++|++++|++++ +| .++++++|++|++++|++++.+| +.++++|+.|+
T Consensus 306 ~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~ 379 (384)
T d2omza2 306 LKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLG 379 (384)
T ss_dssp CTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEE
T ss_pred hcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEee
Confidence 455688999999998653 37889999999999999984 44 58999999999999999998665 78899999999
Q ss_pred CcCC
Q 046398 685 VSNN 688 (794)
Q Consensus 685 ls~N 688 (794)
|++|
T Consensus 380 L~~N 383 (384)
T d2omza2 380 LNDQ 383 (384)
T ss_dssp CCCE
T ss_pred CCCC
Confidence 9987
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.92 E-value=1.2e-23 Score=218.31 Aligned_cols=274 Identities=19% Similarity=0.237 Sum_probs=149.0
Q ss_pred CccEEEeecccccccccccccCCCCCCEEEccCCcCcCCCCCCcCCCCCCCEEEccCCcccccCCccccCCCCCCeEecc
Q 046398 304 ALESLVFSSSQISGHLTSQLGQFKSLRTLSLDDNCISGPLPPALGDLSSLTRLDLSRNMLNGSIPLSLGKISHLEYLDLS 383 (794)
Q Consensus 304 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls 383 (794)
..+.++-+++.++. +|..+. +++++|+|++|+++...+.+|.++++|++|++++|.+....|..|..+++|++|+++
T Consensus 11 ~~~~~~C~~~~L~~-lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 11 HLRVVQCSDLGLEK-VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp ETTEEECTTSCCCS-CCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEecCCCCCc-cCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 34455555555553 343332 466777777777764444456666777777777777765556666666777777777
Q ss_pred CcccccccChhhhcCCCCCCEEECcCCcceeEcCCCCcCccccceEecccccCCCCCCcccCCCCCCCEEeccCCCCCCC
Q 046398 384 NNKMNGTLSEIHFVNLTKLTWFSASGNSLILQVNPNWVPPFQLKTLLLMSCHLGPQFPSWLHSQKNLSVLDISNARISDT 463 (794)
Q Consensus 384 ~N~l~~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~ 463 (794)
+|+++ .++.. ....+..+++..| .+....+..+.....+..++...|....
T Consensus 88 ~n~l~-~l~~~---~~~~l~~L~~~~n------------------------~l~~l~~~~~~~~~~~~~l~~~~n~~~~- 138 (305)
T d1xkua_ 88 KNQLK-ELPEK---MPKTLQELRVHEN------------------------EITKVRKSVFNGLNQMIVVELGTNPLKS- 138 (305)
T ss_dssp SSCCS-BCCSS---CCTTCCEEECCSS------------------------CCCBBCHHHHTTCTTCCEEECCSSCCCG-
T ss_pred CCccC-cCccc---hhhhhhhhhcccc------------------------chhhhhhhhhhccccccccccccccccc-
Confidence 76665 33321 1122333333332 2222222222333334444444443221
Q ss_pred cchhHHhccccceeccCcccCCCCCCCEEEccCCcccccCChhhhhcCCCCcEEEcccccccccCCccccCCCCCCEEEc
Q 046398 464 IPRWFWNSIFQLSGIIPESFKNFSNLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDV 543 (794)
Q Consensus 464 ~p~~~~~~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 543 (794)
....+..+..+++|+.+++++|+++ .+|.. .+++|+.|++
T Consensus 139 ------------~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~~---------------------------~~~~L~~L~l 178 (305)
T d1xkua_ 139 ------------SGIENGAFQGMKKLSYIRIADTNIT-TIPQG---------------------------LPPSLTELHL 178 (305)
T ss_dssp ------------GGBCTTGGGGCTTCCEEECCSSCCC-SCCSS---------------------------CCTTCSEEEC
T ss_pred ------------cCCCccccccccccCccccccCCcc-ccCcc---------------------------cCCccCEEEC
Confidence 0112223334444444444444443 33322 1345555555
Q ss_pred cCCcCcccCCchhhccccccccccccCCCCcccccccccccccceeeEEEEeccchhhcccccceeEEEcCCCccccccC
Q 046398 544 ANNSLSGTMPGCVNNFSAMATIDSSHQSNAMSYFEVTAYDCEVLEDASIVMKGSMVEYNSILNLVRIIDVSKNNFSGEIP 623 (794)
Q Consensus 544 s~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~ip 623 (794)
++|..++..+..+.+++.+ +.|++++|++++..+
T Consensus 179 ~~n~~~~~~~~~~~~~~~l----------------------------------------------~~L~~s~n~l~~~~~ 212 (305)
T d1xkua_ 179 DGNKITKVDAASLKGLNNL----------------------------------------------AKLGLSFNSISAVDN 212 (305)
T ss_dssp TTSCCCEECTGGGTTCTTC----------------------------------------------CEEECCSSCCCEECT
T ss_pred CCCcCCCCChhHhhccccc----------------------------------------------ccccccccccccccc
Confidence 5555555544444333332 555666666665556
Q ss_pred hhhhcccCCCEEecccccccccCCccccccCCCCEEeCCCCcCcccCccc------ccCCCCCCEEeCcCCccc-ccCCC
Q 046398 624 MELTYLRGLQSLNLSHNIFTGQIPENIGNLISIESLDFSTNQLSSKISQS------MSSLSFLNHLNVSNNLLT-GKIPS 696 (794)
Q Consensus 624 ~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~------l~~l~~L~~L~ls~N~l~-g~iP~ 696 (794)
..+.++++|++|+|++|+|+ .+|++|.++++|+.|+|++|+|+...... +..+.+|+.|++++|+++ +++|.
T Consensus 213 ~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~~~~~ 291 (305)
T d1xkua_ 213 GSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQP 291 (305)
T ss_dssp TTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCG
T ss_pred ccccccccceeeeccccccc-ccccccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCccCcCCH
Confidence 66667777777777777777 56777777777777777777777543322 345677888888888874 55554
No 6
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.91 E-value=4.8e-23 Score=213.68 Aligned_cols=253 Identities=22% Similarity=0.315 Sum_probs=163.0
Q ss_pred eecccccCCCCCCEEeCCCCCCCCCCCC-cccCCCCCCCEEEcCCCCCCCCCcccccCCccccccccCcccccccccccc
Q 046398 108 NVNPSLVDLKHLTHLDLSGNDFQGIRIP-KYLGSLKNLRYLNLSGAEFAGIIPHQLGNLSNLRCLDLSWSEYALQVHSFS 186 (794)
Q Consensus 108 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~p-~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~~~~~~~~~~~~ 186 (794)
.+|+.+. +.+++|+|++|+++. +| ..|.++++|++|++++|.+....|..|.++++|++|++++|++.
T Consensus 24 ~lP~~l~--~~l~~L~Ls~N~i~~--l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~------- 92 (305)
T d1xkua_ 24 KVPKDLP--PDTALLDLQNNKITE--IKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK------- 92 (305)
T ss_dssp SCCCSCC--TTCCEEECCSSCCCC--BCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-------
T ss_pred ccCCCCC--CCCCEEECcCCcCCC--cChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccC-------
Confidence 3455553 589999999999985 55 46899999999999999999877888999999999999988765
Q ss_pred ccccCCCCccCCCCCCCEEECcCCCCCCCCCccccCCCCCCeEeeeccCCCCC-CCccccCCCCCCcEEEccCCCCCCCC
Q 046398 187 WLSGQIPNRLGNLTSLRHLDLSANKFNSTTAGWLSKFNHLEFLSLSSNGLQGT-ISSIGLENLTSIKTIDLSLNFELGGP 265 (794)
Q Consensus 187 ~~~~~lp~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~-i~~~~l~~l~~L~~L~L~~~~~~~~~ 265 (794)
.+|..+ ...++.|++++|.+.+..+..+.....++.++...|..... .....+..+++|+.++++ ++.+..
T Consensus 93 ----~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~-~n~l~~- 164 (305)
T d1xkua_ 93 ----ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIA-DTNITT- 164 (305)
T ss_dssp ----BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECC-SSCCCS-
T ss_pred ----cCccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccc-cCCccc-
Confidence 456543 35788899999888887777777777888887777654311 111134455555555555 222221
Q ss_pred CchhhhccCCCCEEEccCCCCCcchHHHHHhhhhcCcCCccEEEeecccccccccccccCCCCCCEEEccCCcCcCCCCC
Q 046398 266 IPTSFVRLCELTSIDVSDVKLSQDLSQVLDILSACGASALESLVFSSSQISGHLTSQLGQFKSLRTLSLDDNCISGPLPP 345 (794)
Q Consensus 266 ~~~~l~~l~~L~~L~l~~~~l~~~~~~~l~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 345 (794)
+|..+ ++ +|++|++++|..++..+..+..++.+++|++++|.+++..+.
T Consensus 165 l~~~~--~~-----------------------------~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~ 213 (305)
T d1xkua_ 165 IPQGL--PP-----------------------------SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNG 213 (305)
T ss_dssp CCSSC--CT-----------------------------TCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTT
T ss_pred cCccc--CC-----------------------------ccCEEECCCCcCCCCChhHhhccccccccccccccccccccc
Confidence 12111 23 555555555555555555566666666666666666655555
Q ss_pred CcCCCCCCCEEEccCCcccccCCccccCCCCCCeEeccCcccccccChhhh------cCCCCCCEEECcCCcc
Q 046398 346 ALGDLSSLTRLDLSRNMLNGSIPLSLGKISHLEYLDLSNNKMNGTLSEIHF------VNLTKLTWFSASGNSL 412 (794)
Q Consensus 346 ~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~------~~l~~L~~L~ls~n~l 412 (794)
++.++++|++|+|++|+++ .+|.++..+++|++|++++|+++ .++...| ...++|+.+++++|++
T Consensus 214 ~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~-~i~~~~f~~~~~~~~~~~L~~L~L~~N~~ 284 (305)
T d1xkua_ 214 SLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPV 284 (305)
T ss_dssp TGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSS
T ss_pred cccccccceeeeccccccc-ccccccccccCCCEEECCCCccC-ccChhhccCcchhcccCCCCEEECCCCcC
Confidence 5556666666666666665 44555666666666666666655 3333222 2345566666666654
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=5.1e-23 Score=210.94 Aligned_cols=167 Identities=17% Similarity=0.227 Sum_probs=92.7
Q ss_pred ccCCCCCCCEEEccCCcccccCChhhhhcCCCCcEEEcccccccccCCccccCCCCCCEEEccCCcCcccCCchhhcccc
Q 046398 482 SFKNFSNLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSA 561 (794)
Q Consensus 482 ~l~~l~~L~~L~Ls~n~l~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 561 (794)
.+.++++|++|++++|.+. .++...+...++|+.+++++|++++..+..|..+++|+.|++++|++++..+..|.++++
T Consensus 100 ~~~~l~~L~~L~l~~n~~~-~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~ 178 (284)
T d1ozna_ 100 TFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHS 178 (284)
T ss_dssp TTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred hhcccccCCEEecCCcccc-cccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccc
Confidence 3444555555555555554 233222224455555555555555544555555666666666666665555544444333
Q ss_pred ccccccccCCCCcccccccccccccceeeEEEEeccchhhcccccceeEEEcCCCccccccChhhhcccCCCEEeccccc
Q 046398 562 MATIDSSHQSNAMSYFEVTAYDCEVLEDASIVMKGSMVEYNSILNLVRIIDVSKNNFSGEIPMELTYLRGLQSLNLSHNI 641 (794)
Q Consensus 562 L~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~l~~l~~L~~L~Ls~N~ 641 (794)
| +.+++++|++++..|..|..+++|++|++++|+
T Consensus 179 L----------------------------------------------~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 212 (284)
T d1ozna_ 179 L----------------------------------------------DRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (284)
T ss_dssp C----------------------------------------------CEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred c----------------------------------------------chhhhhhccccccChhHhhhhhhcccccccccc
Confidence 3 556666666666666666666666666666666
Q ss_pred ccccCCccccccCCCCEEeCCCCcCcccCcccccCCCCCCEEeCcCCcccccCCC
Q 046398 642 FTGQIPENIGNLISIESLDFSTNQLSSKISQSMSSLSFLNHLNVSNNLLTGKIPS 696 (794)
Q Consensus 642 l~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~g~iP~ 696 (794)
+++..|..|+++++|+.|++++|++.+..+.. .-...++.+....+.+.+..|.
T Consensus 213 i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~~~-~l~~~l~~~~~~~~~~~C~~p~ 266 (284)
T d1ozna_ 213 LSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQ 266 (284)
T ss_dssp CSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESG
T ss_pred cccccccccccccccCEEEecCCCCCCCccch-HHHHHHHhCcCCCCceEeCCch
Confidence 66655566666666667777666666543311 1112344555555666655554
No 8
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=1e-22 Score=208.63 Aligned_cols=165 Identities=21% Similarity=0.227 Sum_probs=87.9
Q ss_pred cCCCCCCCEEEccC-CcccccCChhhhhcCCCCcEEEcccccccccCCccccCCCCCCEEEccCCcCcccCCchhhcccc
Q 046398 483 FKNFSNLEVLNLGD-NEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSA 561 (794)
Q Consensus 483 l~~l~~L~~L~Ls~-n~l~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 561 (794)
+..++.++.++... |.++ .++...+.++++|++|++++|.+....+..+...++|+.+++++|++++..+..|..++.
T Consensus 76 ~~~~~~~~~l~~~~~~~~~-~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~ 154 (284)
T d1ozna_ 76 FTGLALLEQLDLSDNAQLR-SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGN 154 (284)
T ss_dssp TTTCTTCCEEECCSCTTCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred ccccccccccccccccccc-cccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccc
Confidence 33444444444432 2232 333333334555666666665555444455555555666666666555444444433332
Q ss_pred ccccccccCCCCcccccccccccccceeeEEEEeccchhhcccccceeEEEcCCCccccccChhhhcccCCCEEeccccc
Q 046398 562 MATIDSSHQSNAMSYFEVTAYDCEVLEDASIVMKGSMVEYNSILNLVRIIDVSKNNFSGEIPMELTYLRGLQSLNLSHNI 641 (794)
Q Consensus 562 L~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~l~~l~~L~~L~Ls~N~ 641 (794)
+ +.|++++|++++..+..+.++++|+.+++++|+
T Consensus 155 L----------------------------------------------~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~ 188 (284)
T d1ozna_ 155 L----------------------------------------------THLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 188 (284)
T ss_dssp C----------------------------------------------CEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred h----------------------------------------------hhcccccCcccccchhhhccccccchhhhhhcc
Confidence 2 555555555555555555555566666666666
Q ss_pred ccccCCccccccCCCCEEeCCCCcCcccCcccccCCCCCCEEeCcCCcccccC
Q 046398 642 FTGQIPENIGNLISIESLDFSTNQLSSKISQSMSSLSFLNHLNVSNNLLTGKI 694 (794)
Q Consensus 642 l~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~g~i 694 (794)
+++..|..|.++++|+.||+++|++.+..|..+..+++|++|++++|++.+..
T Consensus 189 l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C 241 (284)
T d1ozna_ 189 VAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC 241 (284)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred ccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCc
Confidence 55555555555556666666666665555555555555666666666555543
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=3.9e-21 Score=194.51 Aligned_cols=200 Identities=21% Similarity=0.229 Sum_probs=158.3
Q ss_pred ccceEecccccCCCCCCcccCCCCCCCEEeccCCCCCCCcchhHHhccccceeccCcccCCCCCCCEEEccCCcccccCC
Q 046398 425 QLKTLLLMSCHLGPQFPSWLHSQKNLSVLDISNARISDTIPRWFWNSIFQLSGIIPESFKNFSNLEVLNLGDNEFVGKIP 504 (794)
Q Consensus 425 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ip 504 (794)
.+.+++.+++.++. +|..+. +++++|+|++|+|++ ..+..|.++++|++|+|++|+++ .+|
T Consensus 11 ~~~~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~---------------l~~~~f~~l~~L~~L~L~~N~l~-~l~ 71 (266)
T d1p9ag_ 11 SHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYT---------------FSLATLMPYTRLTQLNLDRAELT-KLQ 71 (266)
T ss_dssp TCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSE---------------EEGGGGTTCTTCCEEECTTSCCC-EEE
T ss_pred CCeEEEccCCCCCe-eCcCcC--cCCCEEECcCCcCCC---------------cCHHHhhcccccccccccccccc-ccc
Confidence 34445555555553 454442 578899999998875 23356788899999999999887 566
Q ss_pred hhhhhcCCCCcEEEcccccccccCCccccCCCCCCEEEccCCcCcccCCchhhccccccccccccCCCCccccccccccc
Q 046398 505 TWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATIDSSHQSNAMSYFEVTAYDC 584 (794)
Q Consensus 505 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~ 584 (794)
.. ..+++|+.|+|++|++++ .+..+..+++|++|++++|.+.+..+..+..+.
T Consensus 72 ~~--~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~------------------------ 124 (266)
T d1p9ag_ 72 VD--GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG------------------------ 124 (266)
T ss_dssp CC--SCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCT------------------------
T ss_pred cc--cccccccccccccccccc-cccccccccccccccccccccceeecccccccc------------------------
Confidence 43 258899999999999885 466788899999999999988765555444433
Q ss_pred ccceeeEEEEeccchhhcccccceeEEEcCCCccccccChhhhcccCCCEEecccccccccCCccccccCCCCEEeCCCC
Q 046398 585 EVLEDASIVMKGSMVEYNSILNLVRIIDVSKNNFSGEIPMELTYLRGLQSLNLSHNIFTGQIPENIGNLISIESLDFSTN 664 (794)
Q Consensus 585 ~~l~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~Ls~N 664 (794)
.++.|++++|.+++..+..+..++.|+.|++++|++++..++.|+.+++|++|||++|
T Consensus 125 ----------------------~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 182 (266)
T d1p9ag_ 125 ----------------------ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN 182 (266)
T ss_dssp ----------------------TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred ----------------------ccccccccccccceeccccccccccchhcccccccccccCccccccccccceeecccC
Confidence 3488999999999777777888999999999999999887888999999999999999
Q ss_pred cCcccCcccccCCCCCCEEeCcCCccccc
Q 046398 665 QLSSKISQSMSSLSFLNHLNVSNNLLTGK 693 (794)
Q Consensus 665 ~l~~~~p~~l~~l~~L~~L~ls~N~l~g~ 693 (794)
+|+ .+|+.+..+++|+.|+|++|++...
T Consensus 183 ~L~-~lp~~~~~~~~L~~L~L~~Np~~Cd 210 (266)
T d1p9ag_ 183 SLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (266)
T ss_dssp CCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCc-ccChhHCCCCCCCEEEecCCCCCCC
Confidence 998 7888888999999999999998754
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=2e-20 Score=189.11 Aligned_cols=178 Identities=20% Similarity=0.178 Sum_probs=148.3
Q ss_pred ccceEecccccCCCCCCcccCCCCCCCEEeccCCCCCCCcchhHHhccccceeccCcccCCCCCCCEEEccCCcccccCC
Q 046398 425 QLKTLLLMSCHLGPQFPSWLHSQKNLSVLDISNARISDTIPRWFWNSIFQLSGIIPESFKNFSNLEVLNLGDNEFVGKIP 504 (794)
Q Consensus 425 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ip 504 (794)
.+++|+|++|.+++..+..|..+++|++|++++|+++. +| .+..+++|++|++++|+++ .++
T Consensus 32 ~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~----------------l~-~~~~l~~L~~L~Ls~N~l~-~~~ 93 (266)
T d1p9ag_ 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK----------------LQ-VDGTLPVLGTLDLSHNQLQ-SLP 93 (266)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE----------------EE-CCSCCTTCCEEECCSSCCS-SCC
T ss_pred CCCEEECcCCcCCCcCHHHhhccccccccccccccccc----------------cc-ccccccccccccccccccc-ccc
Confidence 56666666666665556678888999999999998874 22 3567889999999999998 455
Q ss_pred hhhhhcCCCCcEEEcccccccccCCccccCCCCCCEEEccCCcCcccCCchhhccccccccccccCCCCccccccccccc
Q 046398 505 TWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATIDSSHQSNAMSYFEVTAYDC 584 (794)
Q Consensus 505 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~ 584 (794)
..+. .+++|+.|++++|++.+..+..+..+.++++|++++|.++...+..+..++.+
T Consensus 94 ~~~~-~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l---------------------- 150 (266)
T d1p9ag_ 94 LLGQ-TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL---------------------- 150 (266)
T ss_dssp CCTT-TCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTC----------------------
T ss_pred cccc-cccccccccccccccceeeccccccccccccccccccccceeccccccccccc----------------------
Confidence 5554 68999999999999998888888999999999999999986666555544443
Q ss_pred ccceeeEEEEeccchhhcccccceeEEEcCCCccccccChhhhcccCCCEEecccccccccCCccccccCCCCEEeCCCC
Q 046398 585 EVLEDASIVMKGSMVEYNSILNLVRIIDVSKNNFSGEIPMELTYLRGLQSLNLSHNIFTGQIPENIGNLISIESLDFSTN 664 (794)
Q Consensus 585 ~~l~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~Ls~N 664 (794)
+.+++++|++++..+..+..+++|++|+|++|+|+ .+|+.+..+++|+.|+|++|
T Consensus 151 ------------------------~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~N 205 (266)
T d1p9ag_ 151 ------------------------EKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205 (266)
T ss_dssp ------------------------CEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSC
T ss_pred ------------------------hhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCC
Confidence 88999999999888888999999999999999999 89999999999999999999
Q ss_pred cCcc
Q 046398 665 QLSS 668 (794)
Q Consensus 665 ~l~~ 668 (794)
++..
T Consensus 206 p~~C 209 (266)
T d1p9ag_ 206 PWLC 209 (266)
T ss_dssp CBCC
T ss_pred CCCC
Confidence 9875
No 11
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.80 E-value=2.9e-17 Score=173.26 Aligned_cols=138 Identities=18% Similarity=0.205 Sum_probs=95.3
Q ss_pred CCCCEEeCCCCCCCCCCCCcccCCCCCCCEEEcCCCCCCCCCcccccCCccccccccCccccccccccccccccCCCCcc
Q 046398 117 KHLTHLDLSGNDFQGIRIPKYLGSLKNLRYLNLSGAEFAGIIPHQLGNLSNLRCLDLSWSEYALQVHSFSWLSGQIPNRL 196 (794)
Q Consensus 117 ~~L~~L~Ls~n~l~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~~~~~~~~~~~~~~~~~lp~~l 196 (794)
.++++|||+++.++ .+|+. .++|++|+|++|+++ .+|+.+ .+|++|++++|.+. .++.-
T Consensus 38 ~~l~~LdLs~~~L~--~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-----------~l~~l- 96 (353)
T d1jl5a_ 38 RQAHELELNNLGLS--SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-----------ALSDL- 96 (353)
T ss_dssp HTCSEEECTTSCCS--CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-----------CCCSC-
T ss_pred cCCCEEEeCCCCCC--CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-----------hhhhh-
Confidence 47899999999998 57864 568999999999998 678654 57888888887754 22211
Q ss_pred CCCCCCCEEECcCCCCCCCCCccccCCCCCCeEeeeccCCCCCCCccccCCCCCCcEEEccCCCCCCCCCchhhhccCCC
Q 046398 197 GNLTSLRHLDLSANKFNSTTAGWLSKFNHLEFLSLSSNGLQGTISSIGLENLTSIKTIDLSLNFELGGPIPTSFVRLCEL 276 (794)
Q Consensus 197 ~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~i~~~~l~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~L 276 (794)
.+.|++|++++|.+..... ++.+++|++|+++++.+.... .....+..+.+... ....+..+..++.+
T Consensus 97 --p~~L~~L~L~~n~l~~lp~--~~~l~~L~~L~l~~~~~~~~~-----~~~~~l~~l~~~~~---~~~~~~~l~~l~~l 164 (353)
T d1jl5a_ 97 --PPLLEYLGVSNNQLEKLPE--LQNSSFLKIIDVDNNSLKKLP-----DLPPSLEFIAAGNN---QLEELPELQNLPFL 164 (353)
T ss_dssp --CTTCCEEECCSSCCSSCCC--CTTCTTCCEEECCSSCCSCCC-----CCCTTCCEEECCSS---CCSSCCCCTTCTTC
T ss_pred --ccccccccccccccccccc--hhhhccceeeccccccccccc-----cccccccchhhccc---cccccccccccccc
Confidence 1469999999999886543 678999999999998876332 23455666666522 12223344555556
Q ss_pred CEEEccCCCCC
Q 046398 277 TSIDVSDVKLS 287 (794)
Q Consensus 277 ~~L~l~~~~l~ 287 (794)
+.+++..+...
T Consensus 165 ~~L~l~~n~~~ 175 (353)
T d1jl5a_ 165 TAIYADNNSLK 175 (353)
T ss_dssp CEEECCSSCCS
T ss_pred eeccccccccc
Confidence 66666555443
No 12
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.77 E-value=2.9e-17 Score=173.30 Aligned_cols=303 Identities=23% Similarity=0.263 Sum_probs=172.2
Q ss_pred CccEEEeecccccccccccccCCCCCCEEEccCCcCcCCCCCCcCCCCCCCEEEccCCcccccCCccccCCCCCCeEecc
Q 046398 304 ALESLVFSSSQISGHLTSQLGQFKSLRTLSLDDNCISGPLPPALGDLSSLTRLDLSRNMLNGSIPLSLGKISHLEYLDLS 383 (794)
Q Consensus 304 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls 383 (794)
++++|+|+++.++. +|+. .++|++|++++|+++ .+|.. ..+|++|++++|.++ .++. + .+.|++|+++
T Consensus 39 ~l~~LdLs~~~L~~-lp~~---~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~-~l~~-l--p~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLK-ALSD-L--PPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCS-CCCS-C--CTTCCEEECC
T ss_pred CCCEEEeCCCCCCC-CCCC---CCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccc-hhhh-h--cccccccccc
Confidence 67777777777764 4432 457777777777777 45543 346777777777776 3332 1 1457777777
Q ss_pred CcccccccChhhhcCCCCCCEEECcCCcceeEcCCCCcCccccceEecccccCCCCCCcccCCCCCCCEEeccCCCCCCC
Q 046398 384 NNKMNGTLSEIHFVNLTKLTWFSASGNSLILQVNPNWVPPFQLKTLLLMSCHLGPQFPSWLHSQKNLSVLDISNARISDT 463 (794)
Q Consensus 384 ~N~l~~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~ 463 (794)
+|.+. .+|. +..+++|+.++++++.+.... .....+..+.+..+... ....+..++.++.+++++|.....
T Consensus 107 ~n~l~-~lp~--~~~l~~L~~L~l~~~~~~~~~----~~~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~~~ 177 (353)
T d1jl5a_ 107 NNQLE-KLPE--LQNSSFLKIIDVDNNSLKKLP----DLPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLKKL 177 (353)
T ss_dssp SSCCS-SCCC--CTTCTTCCEEECCSSCCSCCC----CCCTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCSSC
T ss_pred ccccc-cccc--hhhhccceeeccccccccccc----cccccccchhhcccccc--ccccccccccceeccccccccccc
Confidence 77776 4553 456777777777777654322 12334555555554432 233456677777888877766541
Q ss_pred cchhHHhccccceeccCcccCCCCCCCEEEccCCcccccCChhhhhcCCCCcEEEcccccccccCCccccCCCCCCEEEc
Q 046398 464 IPRWFWNSIFQLSGIIPESFKNFSNLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDV 543 (794)
Q Consensus 464 ~p~~~~~~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 543 (794)
+. .....+.+...++.+. .++... .++.|+.+++++|.... ++. ...++..+++
T Consensus 178 ----------------~~---~~~~~~~l~~~~~~~~-~~~~~~--~l~~L~~l~l~~n~~~~-~~~---~~~~l~~~~~ 231 (353)
T d1jl5a_ 178 ----------------PD---LPLSLESIVAGNNILE-ELPELQ--NLPFLTTIYADNNLLKT-LPD---LPPSLEALNV 231 (353)
T ss_dssp ----------------CC---CCTTCCEEECCSSCCS-SCCCCT--TCTTCCEEECCSSCCSS-CCS---CCTTCCEEEC
T ss_pred ----------------cc---cccccccccccccccc-cccccc--ccccccccccccccccc-ccc---cccccccccc
Confidence 11 1123344555555443 444322 46666666666666542 222 2345666666
Q ss_pred cCCcCcccCCchhhccccccccccccCCCCcccccccccccccceeeEEEEeccchhhcccccceeEEEcCCCccccccC
Q 046398 544 ANNSLSGTMPGCVNNFSAMATIDSSHQSNAMSYFEVTAYDCEVLEDASIVMKGSMVEYNSILNLVRIIDVSKNNFSGEIP 623 (794)
Q Consensus 544 s~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~ip 623 (794)
.++.+... +.....+........... ............++..+.+.+. +
T Consensus 232 ~~~~~~~~-~~~~~~l~~~~~~~~~~~-----------------------------~l~~l~~~~~~~~~~~~~~~~~-~ 280 (353)
T d1jl5a_ 232 RDNYLTDL-PELPQSLTFLDVSENIFS-----------------------------GLSELPPNLYYLNASSNEIRSL-C 280 (353)
T ss_dssp CSSCCSCC-CCCCTTCCEEECCSSCCS-----------------------------EESCCCTTCCEEECCSSCCSEE-C
T ss_pred cccccccc-cccccccccccccccccc-----------------------------ccccccchhcccccccCccccc-c
Confidence 66665422 211111111100000000 0000112235566777766632 2
Q ss_pred hhhhcccCCCEEecccccccccCCccccccCCCCEEeCCCCcCcccCcccccCCCCCCEEeCcCCcccccCCC
Q 046398 624 MELTYLRGLQSLNLSHNIFTGQIPENIGNLISIESLDFSTNQLSSKISQSMSSLSFLNHLNVSNNLLTGKIPS 696 (794)
Q Consensus 624 ~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~g~iP~ 696 (794)
..+++|++|+|++|+++ .+|.. +++|+.|+|++|+|+ .+|+. +++|++|++++|+++ .+|.
T Consensus 281 ---~~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~-~lp~ 341 (353)
T d1jl5a_ 281 ---DLPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLR-EFPD 341 (353)
T ss_dssp ---CCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-SCCC
T ss_pred ---ccCCCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCC-ccccc---cCCCCEEECcCCcCC-CCCc
Confidence 23578888888888888 67754 567888888888887 46643 457888899998887 5664
No 13
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.9e-20 Score=204.25 Aligned_cols=197 Identities=17% Similarity=0.099 Sum_probs=118.0
Q ss_pred CCCCCCCEEeccCCCCCCCcchhHHhccccceeccCcccCCCCCCCEEEccCCcccccCC----hhhhhcCCCCcEEEcc
Q 046398 445 HSQKNLSVLDISNARISDTIPRWFWNSIFQLSGIIPESFKNFSNLEVLNLGDNEFVGKIP----TWMGEGFTSLLILILR 520 (794)
Q Consensus 445 ~~l~~L~~L~Ls~n~l~~~~p~~~~~~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ip----~~~~~~l~~L~~L~L~ 520 (794)
...+.++.+++++|++..... ....+........++.+++++|.+..... ..+. ..+.++.++++
T Consensus 223 ~~~~~~~~l~~~~n~~~~~~~----------~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~-~~~~l~~l~l~ 291 (460)
T d1z7xw1 223 ASKASLRELALGSNKLGDVGM----------AELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLR-AKESLKELSLA 291 (460)
T ss_dssp HHCTTCCEEECCSSBCHHHHH----------HHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHH-HCTTCCEEECT
T ss_pred cccccccccchhhcccccccc----------chhhccccccccccccccccccccccccccccccccc-ccccccccccc
Confidence 445667777777776543110 01122334455678888888877653221 1222 46777888888
Q ss_pred cccccccCCccc-----cCCCCCCEEEccCCcCcccCCchhhccccccccccccCCCCcccccccccccccceeeEEEEe
Q 046398 521 SNKFDGFLPIQL-----CRLTSLQILDVANNSLSGTMPGCVNNFSAMATIDSSHQSNAMSYFEVTAYDCEVLEDASIVMK 595 (794)
Q Consensus 521 ~n~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 595 (794)
+|.++......+ .....|+.+++++|.++......+.+
T Consensus 292 ~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~------------------------------------- 334 (460)
T d1z7xw1 292 GNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS------------------------------------- 334 (460)
T ss_dssp TCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH-------------------------------------
T ss_pred cccccccccchhhccccccccccccccccccchhhhhhhhccc-------------------------------------
Confidence 887754222111 23457888888888776332222211
Q ss_pred ccchhhcccccceeEEEcCCCccccc----cChhhh-cccCCCEEeccccccccc----CCccccccCCCCEEeCCCCcC
Q 046398 596 GSMVEYNSILNLVRIIDVSKNNFSGE----IPMELT-YLRGLQSLNLSHNIFTGQ----IPENIGNLISIESLDFSTNQL 666 (794)
Q Consensus 596 ~~~~~~~~~l~~L~~LdLs~N~l~~~----ip~~l~-~l~~L~~L~Ls~N~l~~~----ip~~l~~l~~L~~L~Ls~N~l 666 (794)
.....+.|+.|||++|++++. +++.+. ..+.|++|+|++|.|+.. +++.+...++|++|||++|++
T Consensus 335 -----~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i 409 (460)
T d1z7xw1 335 -----VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCL 409 (460)
T ss_dssp -----HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSC
T ss_pred -----ccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcC
Confidence 111234568888888888653 333333 356788889988888742 445566778888899998888
Q ss_pred cccCcccc----c-CCCCCCEEeCcCCcccccC
Q 046398 667 SSKISQSM----S-SLSFLNHLNVSNNLLTGKI 694 (794)
Q Consensus 667 ~~~~p~~l----~-~l~~L~~L~ls~N~l~g~i 694 (794)
+......+ . +...|+.|++++|.+....
T Consensus 410 ~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~~~ 442 (460)
T d1z7xw1 410 GDAGILQLVESVRQPGCLLEQLVLYDIYWSEEM 442 (460)
T ss_dssp CHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHH
T ss_pred CHHHHHHHHHHHHhCCCccCEEECCCCCCCHHH
Confidence 76443333 2 3346888999888887543
No 14
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=5.4e-21 Score=210.18 Aligned_cols=399 Identities=21% Similarity=0.191 Sum_probs=220.6
Q ss_pred CCCEEeCCCCCCCCCCCCcccCCCCCCCEEEcCCCCCCC----CCcccccCCccccccccCccccccccccccccccCCC
Q 046398 118 HLTHLDLSGNDFQGIRIPKYLGSLKNLRYLNLSGAEFAG----IIPHQLGNLSNLRCLDLSWSEYALQVHSFSWLSGQIP 193 (794)
Q Consensus 118 ~L~~L~Ls~n~l~~~~~p~~~~~l~~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~Ls~~~~~~~~~~~~~~~~~lp 193 (794)
+|++||+++|++++..+.+.+..++++|+|+|++|.++. .++..+..+++|++|||++|.+... .+ ..+.
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~--~~----~~l~ 76 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDV--GV----HCVL 76 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHH--HH----HHHH
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChH--HH----HHHH
Confidence 688999999999875555666778999999999998874 2455677889999999998875310 00 0122
Q ss_pred CccC-CCCCCCEEECcCCCCCCCC----CccccCCCCCCeEeeeccCCCCCCCcc---cc-CCCCCCcEEEccCCCCCCC
Q 046398 194 NRLG-NLTSLRHLDLSANKFNSTT----AGWLSKFNHLEFLSLSSNGLQGTISSI---GL-ENLTSIKTIDLSLNFELGG 264 (794)
Q Consensus 194 ~~l~-~l~~L~~L~Ls~n~l~~~~----~~~l~~l~~L~~L~L~~n~l~~~i~~~---~l-~~l~~L~~L~L~~~~~~~~ 264 (794)
..+. ..++|++|+|++|+++... +..+..+++|++|++++|.+...-... .+ .............. ....
T Consensus 77 ~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~ 155 (460)
T d1z7xw1 77 QGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYC-SLSA 155 (460)
T ss_dssp HTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS-CCBG
T ss_pred HHHhcCCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhccccccccccccccccc-ccch
Confidence 2222 2457999999999987653 345677889999999998875321110 01 11222333333311 1111
Q ss_pred C----CchhhhccCCCCEEEccCCCCCcchHHHHHhhhhcCcCCccEEEeeccccccc----ccccccCCCCCCEEEccC
Q 046398 265 P----IPTSFVRLCELTSIDVSDVKLSQDLSQVLDILSACGASALESLVFSSSQISGH----LTSQLGQFKSLRTLSLDD 336 (794)
Q Consensus 265 ~----~~~~l~~l~~L~~L~l~~~~l~~~~~~~l~~l~~~~~~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~ 336 (794)
. ....+.....++.++++.+.............-.........+++..+.+... ....+...+.++.+++.+
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~ 235 (460)
T d1z7xw1 156 ASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 235 (460)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCS
T ss_pred hhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhh
Confidence 1 11224455677777777766543322222111111112445566655544321 112233455666666666
Q ss_pred CcCcCC-----CCCCcCCCCCCCEEEccCCccccc----CCccccCCCCCCeEeccCcccccccChhhhcCCCCCCEEEC
Q 046398 337 NCISGP-----LPPALGDLSSLTRLDLSRNMLNGS----IPLSLGKISHLEYLDLSNNKMNGTLSEIHFVNLTKLTWFSA 407 (794)
Q Consensus 337 n~l~~~-----~p~~l~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l 407 (794)
|.+... .+........++.+++++|.+... ....+...+.++.+++++|.+...... .+..
T Consensus 236 n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~-~l~~--------- 305 (460)
T d1z7xw1 236 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR-LLCE--------- 305 (460)
T ss_dssp SBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH-HHHH---------
T ss_pred ccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccc-hhhc---------
Confidence 654321 111223345566666666655422 112233455666666666655421111 0000
Q ss_pred cCCcceeEcCCCCcCccccceEecccccCCCCC----CcccCCCCCCCEEeccCCCCCCCcchhHHhccccceeccCccc
Q 046398 408 SGNSLILQVNPNWVPPFQLKTLLLMSCHLGPQF----PSWLHSQKNLSVLDISNARISDTIPRWFWNSIFQLSGIIPESF 483 (794)
Q Consensus 408 s~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~----~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~~~~~l~~~~p~~l 483 (794)
........|+.+++++|.++... ...+...++|++|+|++|++++..... +++.+
T Consensus 306 ----------~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~-----------l~~~l 364 (460)
T d1z7xw1 306 ----------TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRE-----------LCQGL 364 (460)
T ss_dssp ----------HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHH-----------HHHHH
T ss_pred ----------cccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccch-----------hhhhh
Confidence 00011224555555555544332 223345567889999988876421111 22223
Q ss_pred -CCCCCCCEEEccCCccccc----CChhhhhcCCCCcEEEcccccccccCCcc----cc-CCCCCCEEEccCCcCcccCC
Q 046398 484 -KNFSNLEVLNLGDNEFVGK----IPTWMGEGFTSLLILILRSNKFDGFLPIQ----LC-RLTSLQILDVANNSLSGTMP 553 (794)
Q Consensus 484 -~~l~~L~~L~Ls~n~l~~~----ip~~~~~~l~~L~~L~L~~n~l~~~~p~~----~~-~l~~L~~L~Ls~N~l~~~~p 553 (794)
...+.|++|+|++|++++. ++..+. .+++|++|+|++|+++...... +. +...|+.|++.+|.+.....
T Consensus 365 ~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~-~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~~~~ 443 (460)
T d1z7xw1 365 GQPGSVLRVLWLADCDVSDSSCSSLAATLL-ANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEME 443 (460)
T ss_dssp TSTTCCCCEEECTTSCCCHHHHHHHHHHHH-HCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHH
T ss_pred hcccCCCCEEECCCCCCChHHHHHHHHHHh-cCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCHHHH
Confidence 2456789999999988743 233333 5688999999999887543322 22 34579999999998875544
Q ss_pred ch
Q 046398 554 GC 555 (794)
Q Consensus 554 ~~ 555 (794)
..
T Consensus 444 ~~ 445 (460)
T d1z7xw1 444 DR 445 (460)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 15
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.69 E-value=3.6e-17 Score=155.94 Aligned_cols=169 Identities=18% Similarity=0.245 Sum_probs=91.1
Q ss_pred CEEEccCCcccccCChhhhhcCCCCcEEEcccccccccC-CccccCCCCCCEEEccCCcCcccCCchhhccccccccccc
Q 046398 490 EVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFL-PIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATIDSS 568 (794)
Q Consensus 490 ~~L~Ls~n~l~~~ip~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~ 568 (794)
+.++.++++++ ++|..+. +++++|+|++|++++.+ +..|..+++|++|++++|++.+..+..+..+++|
T Consensus 11 ~~v~Cs~~~L~-~iP~~lp---~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L------ 80 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDIP---LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHI------ 80 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTC------
T ss_pred CEEEEeCCCcC-ccCCCCC---CCCCEEEeCCCCCcccccccccCCCceEeeeecccccccccccccccccccc------
Confidence 34555555555 4554332 35555555555555422 3445556666666666666655555544443333
Q ss_pred cCCCCcccccccccccccceeeEEEEeccchhhcccccceeEEEcCCCccccccChhhhcccCCCEEecccccccccCCc
Q 046398 569 HQSNAMSYFEVTAYDCEVLEDASIVMKGSMVEYNSILNLVRIIDVSKNNFSGEIPMELTYLRGLQSLNLSHNIFTGQIPE 648 (794)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~ip~ 648 (794)
+.|+|++|++++..|..|.++++|++|+|++|+|++..|+
T Consensus 81 ----------------------------------------~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~ 120 (192)
T d1w8aa_ 81 ----------------------------------------QELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPG 120 (192)
T ss_dssp ----------------------------------------CEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTT
T ss_pred ----------------------------------------ceeeeccccccccCHHHHhCCCcccccccCCccccccCHH
Confidence 5566666666655555566666666666666666655556
Q ss_pred cccccCCCCEEeCCCCcCcccCcccccCCCCCCEEeCcCCcccccCCCCCccCccCcccccCC
Q 046398 649 NIGNLISIESLDFSTNQLSSKISQSMSSLSFLNHLNVSNNLLTGKIPSSTQLQSFDASCFVGN 711 (794)
Q Consensus 649 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gn 711 (794)
.|..+++|++|+|++|.+....+... -...++.+.+..|.+++..|. .++......+..|
T Consensus 121 ~f~~l~~L~~l~L~~N~~~~~~~~~~-~~~~l~~~~l~~~~~~c~~p~--~l~~~~l~~L~~n 180 (192)
T d1w8aa_ 121 SFEHLNSLTSLNLASNPFNCNCHLAW-FAEWLRKKSLNGGAARCGAPS--KVRDVQIKDLPHS 180 (192)
T ss_dssp SSTTCTTCCEEECTTCCBCCSGGGHH-HHHHHHHHCCSGGGCBBCSST--TTTTSBGGGSCTT
T ss_pred HhcCCcccccccccccccccccchHH-HhhhhhhhcccCCCeEeCCCh--hhcCCEeeecCHh
Confidence 66666666666666666654332111 112244555566666655553 2333333334444
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.68 E-value=3.9e-16 Score=153.20 Aligned_cols=185 Identities=21% Similarity=0.324 Sum_probs=125.6
Q ss_pred ccceEecccccCCCCCCcccCCCCCCCEEeccCCCCCCCcchhHHhccccceeccCcccCCCCCCCEEEccCCcccccCC
Q 046398 425 QLKTLLLMSCHLGPQFPSWLHSQKNLSVLDISNARISDTIPRWFWNSIFQLSGIIPESFKNFSNLEVLNLGDNEFVGKIP 504 (794)
Q Consensus 425 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ip 504 (794)
+|+.|.+.+|.+.. ++ .+..+++|++|++++|++++. ..+..+++|+++++++|.++ .++
T Consensus 42 ~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~-----------------~~l~~l~~l~~l~~~~n~~~-~i~ 101 (227)
T d1h6ua2 42 GITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-----------------APLKNLTKITELELSGNPLK-NVS 101 (227)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-----------------GGGTTCCSCCEEECCSCCCS-CCG
T ss_pred CcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeecc-----------------cccccccccccccccccccc-ccc
Confidence 33444444444432 22 356677777777777777652 12567777777777777776 454
Q ss_pred hhhhhcCCCCcEEEcccccccccCCccccCCCCCCEEEccCCcCcccCCchhhccccccccccccCCCCccccccccccc
Q 046398 505 TWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATIDSSHQSNAMSYFEVTAYDC 584 (794)
Q Consensus 505 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~ 584 (794)
. +. .+++|+.+++++|...+. ..+...+.++.++++++.+....+ +.
T Consensus 102 ~-l~-~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~--~~--------------------------- 148 (227)
T d1h6ua2 102 A-IA-GLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNISP--LA--------------------------- 148 (227)
T ss_dssp G-GT-TCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCGG--GG---------------------------
T ss_pred c-cc-cccccccccccccccccc--chhccccchhhhhchhhhhchhhh--hc---------------------------
Confidence 3 33 577777777777776643 235566777777777776653221 11
Q ss_pred ccceeeEEEEeccchhhcccccceeEEEcCCCccccccChhhhcccCCCEEecccccccccCCccccccCCCCEEeCCCC
Q 046398 585 EVLEDASIVMKGSMVEYNSILNLVRIIDVSKNNFSGEIPMELTYLRGLQSLNLSHNIFTGQIPENIGNLISIESLDFSTN 664 (794)
Q Consensus 585 ~~l~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~Ls~N 664 (794)
..+.++.|++++|.+.+.. .++++++|++|+|++|++++ +|. ++++++|+.|+|++|
T Consensus 149 -------------------~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~-l~~-l~~l~~L~~L~Ls~N 205 (227)
T d1h6ua2 149 -------------------GLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISD-ISP-LASLPNLIEVHLKNN 205 (227)
T ss_dssp -------------------GCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECTTS
T ss_pred -------------------cccccccccccccccccch--hhcccccceecccCCCccCC-Chh-hcCCCCCCEEECcCC
Confidence 2334588888888887433 37888999999999999984 443 888999999999999
Q ss_pred cCcccCcccccCCCCCCEEeCcC
Q 046398 665 QLSSKISQSMSSLSFLNHLNVSN 687 (794)
Q Consensus 665 ~l~~~~p~~l~~l~~L~~L~ls~ 687 (794)
++++..| ++++++|+.|++++
T Consensus 206 ~lt~i~~--l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 206 QISDVSP--LANTSNLFIVTLTN 226 (227)
T ss_dssp CCCBCGG--GTTCTTCCEEEEEE
T ss_pred cCCCCcc--cccCCCCCEEEeeC
Confidence 9986543 78899999999874
No 17
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=1.7e-16 Score=157.66 Aligned_cols=73 Identities=19% Similarity=0.242 Sum_probs=34.9
Q ss_pred CEEEccCCcCcCCCCCCcCCCCCCCEEEccCCcccccCCccccCCCCCCeEeccCcccccccChhhhcCCCCCCEE
Q 046398 330 RTLSLDDNCISGPLPPALGDLSSLTRLDLSRNMLNGSIPLSLGKISHLEYLDLSNNKMNGTLSEIHFVNLTKLTWF 405 (794)
Q Consensus 330 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 405 (794)
+.++.++..++ .+|..+. +++++|++++|.++...+..|.++++|++|++++|.+...++...|.++++++.+
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l 83 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEI 83 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEE
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccc
Confidence 34444444444 3443331 3455566666655533333455555666666666555444443334444433333
No 18
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.67 E-value=4.9e-16 Score=152.50 Aligned_cols=191 Identities=25% Similarity=0.371 Sum_probs=116.3
Q ss_pred cccCCCCCCEEeCCCCCCCCCCCCcccCCCCCCCEEEcCCCCCCCCCcccccCCccccccccCccccccccccccccccC
Q 046398 112 SLVDLKHLTHLDLSGNDFQGIRIPKYLGSLKNLRYLNLSGAEFAGIIPHQLGNLSNLRCLDLSWSEYALQVHSFSWLSGQ 191 (794)
Q Consensus 112 ~l~~l~~L~~L~Ls~n~l~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~~~~~~~~~~~~~~~~~ 191 (794)
.+.++.+|++|++.+|+++. + +.+..+++|++|++++|.+++..| +.++++|+++++++|... .
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~--l-~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-----------~ 99 (227)
T d1h6ua2 36 TQADLDGITTLSAFGTGVTT--I-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-----------N 99 (227)
T ss_dssp CHHHHHTCCEEECTTSCCCC--C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-----------C
T ss_pred CHHHcCCcCEEECCCCCCCc--c-hhHhcCCCCcEeecCCceeecccc--cccccccccccccccccc-----------c
Confidence 34567777888888887773 4 346777788888888877775433 667777777777665533 2
Q ss_pred CCCccCCCCCCCEEECcCCCCCCCCCccccCCCCCCeEeeeccCCCCCCCccccCCCCCCcEEEccCCCCCCCCCchhhh
Q 046398 192 IPNRLGNLTSLRHLDLSANKFNSTTAGWLSKFNHLEFLSLSSNGLQGTISSIGLENLTSIKTIDLSLNFELGGPIPTSFV 271 (794)
Q Consensus 192 lp~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~i~~~~l~~l~~L~~L~L~~~~~~~~~~~~~l~ 271 (794)
+ ..+.++++|+.++++++...+..+ +...+.++.+.++.+.+... ..+.
T Consensus 100 i-~~l~~l~~L~~l~l~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~----------------------------~~~~ 148 (227)
T d1h6ua2 100 V-SAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNI----------------------------SPLA 148 (227)
T ss_dssp C-GGGTTCTTCCEEECTTSCCCCCGG--GTTCTTCCEEECCSSCCCCC----------------------------GGGG
T ss_pred c-ccccccccccccccccccccccch--hccccchhhhhchhhhhchh----------------------------hhhc
Confidence 2 235566666666666665544322 44455555555555554321 1233
Q ss_pred ccCCCCEEEccCCCCCcchHHHHHhhhhcCcCCccEEEeecccccccccccccCCCCCCEEEccCCcCcCCCCCCcCCCC
Q 046398 272 RLCELTSIDVSDVKLSQDLSQVLDILSACGASALESLVFSSSQISGHLTSQLGQFKSLRTLSLDDNCISGPLPPALGDLS 351 (794)
Q Consensus 272 ~l~~L~~L~l~~~~l~~~~~~~l~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 351 (794)
..++|+.|++++|.+.+..+ +. .+++|++|++++|++++. + .++.+++|++|++++|++++. + .+++++
T Consensus 149 ~~~~L~~L~l~~n~~~~~~~--l~-----~l~~L~~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~lt~i-~-~l~~l~ 217 (227)
T d1h6ua2 149 GLTNLQYLSIGNAQVSDLTP--LA-----NLSKLTTLKADDNKISDI-S-PLASLPNLIEVHLKNNQISDV-S-PLANTS 217 (227)
T ss_dssp GCTTCCEEECCSSCCCCCGG--GT-----TCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECTTSCCCBC-G-GGTTCT
T ss_pred cccccccccccccccccchh--hc-----ccccceecccCCCccCCC-h-hhcCCCCCCEEECcCCcCCCC-c-ccccCC
Confidence 44445555555554443221 22 223667777777766653 2 367788888888888888754 3 277888
Q ss_pred CCCEEEccC
Q 046398 352 SLTRLDLSR 360 (794)
Q Consensus 352 ~L~~L~Ls~ 360 (794)
+|++|++++
T Consensus 218 ~L~~L~lsn 226 (227)
T d1h6ua2 218 NLFIVTLTN 226 (227)
T ss_dssp TCCEEEEEE
T ss_pred CCCEEEeeC
Confidence 888888863
No 19
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.66 E-value=9.9e-17 Score=152.84 Aligned_cols=178 Identities=16% Similarity=0.169 Sum_probs=118.7
Q ss_pred CCEEeccCCCCCCCcchhHHhccccceeccCcccCCCCCCCEEEccCCcccccCChhhhhcCCCCcEEEcccccccccCC
Q 046398 450 LSVLDISNARISDTIPRWFWNSIFQLSGIIPESFKNFSNLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLP 529 (794)
Q Consensus 450 L~~L~Ls~n~l~~~~p~~~~~~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p 529 (794)
.+.++.++++++. +|..+. +++++|+|++|+|++.++...+.++++|+.|+|++|++.+..+
T Consensus 10 ~~~v~Cs~~~L~~----------------iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~ 71 (192)
T d1w8aa_ 10 GTTVDCTGRGLKE----------------IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEP 71 (192)
T ss_dssp TTEEECTTSCCSS----------------CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCT
T ss_pred CCEEEEeCCCcCc----------------cCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccc
Confidence 4677777777764 444432 5677777887777655655555567777778887777777777
Q ss_pred ccccCCCCCCEEEccCCcCcccCCchhhccccccccccccCCCCcccccccccccccceeeEEEEeccchhhccccccee
Q 046398 530 IQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATIDSSHQSNAMSYFEVTAYDCEVLEDASIVMKGSMVEYNSILNLVR 609 (794)
Q Consensus 530 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~ 609 (794)
..+..+++|++|+|++|++++..|..|.++++| +
T Consensus 72 ~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L----------------------------------------------~ 105 (192)
T d1w8aa_ 72 NAFEGASHIQELQLGENKIKEISNKMFLGLHQL----------------------------------------------K 105 (192)
T ss_dssp TTTTTCTTCCEEECCSCCCCEECSSSSTTCTTC----------------------------------------------C
T ss_pred cccccccccceeeeccccccccCHHHHhCCCcc----------------------------------------------c
Confidence 777777777788888777776666666655544 6
Q ss_pred EEEcCCCccccccChhhhcccCCCEEecccccccccCCccccccCCCCEEeCCCCcCcccCcccccCCCCCCEEeCcCCc
Q 046398 610 IIDVSKNNFSGEIPMELTYLRGLQSLNLSHNIFTGQIPENIGNLISIESLDFSTNQLSSKISQSMSSLSFLNHLNVSNNL 689 (794)
Q Consensus 610 ~LdLs~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~ 689 (794)
.|+|++|+|++..|..|..+++|++|+|++|.+....+ ...-...++.+.+..|.+....|..+ ..++.++|+.|.
T Consensus 106 ~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~-~~~~~~~l~~~~l~~~~~~c~~p~~l---~~~~l~~L~~n~ 181 (192)
T d1w8aa_ 106 TLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH-LAWFAEWLRKKSLNGGAARCGAPSKV---RDVQIKDLPHSE 181 (192)
T ss_dssp EEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG-GHHHHHHHHHHCCSGGGCBBCSSTTT---TTSBGGGSCTTT
T ss_pred ccccCCccccccCHHHhcCCcccccccccccccccccc-hHHHhhhhhhhcccCCCeEeCCChhh---cCCEeeecCHhh
Confidence 77777777777667777777777778877777763322 11112335556667777776666543 345566777777
Q ss_pred ccccCC
Q 046398 690 LTGKIP 695 (794)
Q Consensus 690 l~g~iP 695 (794)
+...-|
T Consensus 182 l~C~~~ 187 (192)
T d1w8aa_ 182 FKCSSE 187 (192)
T ss_dssp CCCCCC
T ss_pred CcCCCC
Confidence 765433
No 20
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1e-16 Score=159.32 Aligned_cols=197 Identities=19% Similarity=0.144 Sum_probs=95.1
Q ss_pred CCCEEECcCCCCCCCCCccccCCCCCCeEeeeccCCCCCCCccccCCCCCCcEEEccCCCCCCCCCchhhhccCCCCEEE
Q 046398 201 SLRHLDLSANKFNSTTAGWLSKFNHLEFLSLSSNGLQGTISSIGLENLTSIKTIDLSLNFELGGPIPTSFVRLCELTSID 280 (794)
Q Consensus 201 ~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~i~~~~l~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~L~~L~ 280 (794)
++++|++++|+++...+..|.++++|++|++++|.+...++...+.++++++++.+...+.+....+..+..+++|+.++
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccc
Confidence 45555555555555555555555566666666555554444445555566666555434444444445555555555555
Q ss_pred ccCCCCCcchHHHHHhhhhcCcCCccEEEeecccccccccccccCCC-CCCEEEccCCcCcCCCCCCcCCCCCCCEE-Ec
Q 046398 281 VSDVKLSQDLSQVLDILSACGASALESLVFSSSQISGHLTSQLGQFK-SLRTLSLDDNCISGPLPPALGDLSSLTRL-DL 358 (794)
Q Consensus 281 l~~~~l~~~~~~~l~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L-~L 358 (794)
++++.+....+.. .+ .....+..+...++.+....+..+..++ .++.|++++|+++...+..+ ...+++++ ++
T Consensus 110 l~~~~l~~~~~~~--~~--~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~-~~~~l~~~~~l 184 (242)
T d1xwdc1 110 ISNTGIKHLPDVH--KI--HSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAF-NGTQLDELNLS 184 (242)
T ss_dssp EESCCCCSCCCCT--TT--CBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTT-TTCCEEEEECT
T ss_pred cchhhhccccccc--cc--ccccccccccccccccccccccccccccccceeeecccccccccccccc-cchhhhccccc
Confidence 5555544321100 00 0111333444444445444444444432 55556666666653333322 23333333 34
Q ss_pred cCCcccccCCccccCCCCCCeEeccCcccccccChhhhcCCCCCC
Q 046398 359 SRNMLNGSIPLSLGKISHLEYLDLSNNKMNGTLSEIHFVNLTKLT 403 (794)
Q Consensus 359 s~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~ 403 (794)
++|+++...+..|.++++|++|++++|+++ .+|...|.++++|+
T Consensus 185 ~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~~~l~~L~ 228 (242)
T d1xwdc1 185 DNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLR 228 (242)
T ss_dssp TCTTCCCCCTTTTTTSCCCSEEECTTSCCC-CCCSSSCTTCCEEE
T ss_pred cccccccccHHHhcCCCCCCEEECCCCcCC-ccCHHHHcCCcccc
Confidence 555555333334555666666666666655 44443444444333
No 21
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.63 E-value=2.9e-15 Score=144.64 Aligned_cols=165 Identities=22% Similarity=0.349 Sum_probs=127.4
Q ss_pred CCCCCEEeccCCCCCCCcchhHHhccccceeccCcccCCCCCCCEEEccCCcccccCChhhhhcCCCCcEEEcccccccc
Q 046398 447 QKNLSVLDISNARISDTIPRWFWNSIFQLSGIIPESFKNFSNLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDG 526 (794)
Q Consensus 447 l~~L~~L~Ls~n~l~~~~p~~~~~~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ip~~~~~~l~~L~~L~L~~n~l~~ 526 (794)
+.+|++|++++|.+++ + ..+..+++|++|++++|++++ ++. +. .+++|+.|++++|++++
T Consensus 45 L~~L~~L~l~~~~i~~----------------l-~~l~~l~~L~~L~L~~n~i~~-l~~-~~-~l~~L~~L~l~~n~i~~ 104 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKS----------------V-QGIQYLPNVTKLFLNGNKLTD-IKP-LA-NLKNLGWLFLDENKVKD 104 (210)
T ss_dssp HHTCCEEECTTSCCCC----------------C-TTGGGCTTCCEEECCSSCCCC-CGG-GT-TCTTCCEEECCSSCCCC
T ss_pred hcCccEEECcCCCCCC----------------c-hhHhhCCCCCEEeCCCccccC-ccc-cc-cCccccccccccccccc
Confidence 4578888888888775 2 236678889999999998884 553 33 68899999999998875
Q ss_pred cCCccccCCCCCCEEEccCCcCcccCCchhhccccccccccccCCCCcccccccccccccceeeEEEEeccchhhccccc
Q 046398 527 FLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATIDSSHQSNAMSYFEVTAYDCEVLEDASIVMKGSMVEYNSILN 606 (794)
Q Consensus 527 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 606 (794)
+| .+..+++|+.|++++|.+.. ++ .+.. ++
T Consensus 105 -l~-~l~~l~~L~~L~l~~~~~~~-~~-~l~~----------------------------------------------l~ 134 (210)
T d1h6ta2 105 -LS-SLKDLKKLKSLSLEHNGISD-IN-GLVH----------------------------------------------LP 134 (210)
T ss_dssp -GG-GGTTCTTCCEEECTTSCCCC-CG-GGGG----------------------------------------------CT
T ss_pred -cc-cccccccccccccccccccc-cc-cccc----------------------------------------------cc
Confidence 33 57888999999999988752 11 2222 33
Q ss_pred ceeEEEcCCCccccccChhhhcccCCCEEecccccccccCCccccccCCCCEEeCCCCcCcccCcccccCCCCCCEEeCc
Q 046398 607 LVRIIDVSKNNFSGEIPMELTYLRGLQSLNLSHNIFTGQIPENIGNLISIESLDFSTNQLSSKISQSMSSLSFLNHLNVS 686 (794)
Q Consensus 607 ~L~~LdLs~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls 686 (794)
.++.+++++|.+++ +..+..+++|+.+++++|++++ ++ .++++++|+.|+|++|+++. +| .+.++++|++|+|+
T Consensus 135 ~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~-i~-~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 135 QLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISD-IV-PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELF 208 (210)
T ss_dssp TCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEE
T ss_pred cccccccccccccc--cccccccccccccccccccccc-cc-cccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEcc
Confidence 44888999999874 3457789999999999999985 44 38899999999999999985 55 58999999999987
Q ss_pred C
Q 046398 687 N 687 (794)
Q Consensus 687 ~ 687 (794)
+
T Consensus 209 ~ 209 (210)
T d1h6ta2 209 S 209 (210)
T ss_dssp E
T ss_pred C
Confidence 4
No 22
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.62 E-value=2.9e-15 Score=144.70 Aligned_cols=163 Identities=20% Similarity=0.313 Sum_probs=121.9
Q ss_pred ccceEecccccCCCCCCcccCCCCCCCEEeccCCCCCCCcchhHHhccccceeccCcccCCCCCCCEEEccCCcccccCC
Q 046398 425 QLKTLLLMSCHLGPQFPSWLHSQKNLSVLDISNARISDTIPRWFWNSIFQLSGIIPESFKNFSNLEVLNLGDNEFVGKIP 504 (794)
Q Consensus 425 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ip 504 (794)
+|+.|++++|.+.... .+..+++|++|++++|++++ ++ .+..+++|++|++++|+++ .+|
T Consensus 47 ~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~----------------l~-~~~~l~~L~~L~l~~n~i~-~l~ 106 (210)
T d1h6ta2 47 SIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTD----------------IK-PLANLKNLGWLFLDENKVK-DLS 106 (210)
T ss_dssp TCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCC----------------CG-GGTTCTTCCEEECCSSCCC-CGG
T ss_pred CccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccC----------------cc-ccccCcccccccccccccc-ccc
Confidence 4444555555444322 25678889999999998876 22 3567889999999999987 566
Q ss_pred hhhhhcCCCCcEEEcccccccccCCccccCCCCCCEEEccCCcCcccCCchhhccccccccccccCCCCccccccccccc
Q 046398 505 TWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATIDSSHQSNAMSYFEVTAYDC 584 (794)
Q Consensus 505 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~ 584 (794)
. +. .+++|+.|++++|.+... ..+..+++++.+++++|.+++. ..+..
T Consensus 107 ~-l~-~l~~L~~L~l~~~~~~~~--~~l~~l~~l~~l~~~~n~l~~~--~~~~~-------------------------- 154 (210)
T d1h6ta2 107 S-LK-DLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSR-------------------------- 154 (210)
T ss_dssp G-GT-TCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGG--------------------------
T ss_pred c-cc-cccccccccccccccccc--cccccccccccccccccccccc--ccccc--------------------------
Confidence 4 33 689999999999988642 4678889999999999988632 12222
Q ss_pred ccceeeEEEEeccchhhcccccceeEEEcCCCccccccChhhhcccCCCEEecccccccccCCccccccCCCCEEeCCC
Q 046398 585 EVLEDASIVMKGSMVEYNSILNLVRIIDVSKNNFSGEIPMELTYLRGLQSLNLSHNIFTGQIPENIGNLISIESLDFST 663 (794)
Q Consensus 585 ~~l~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~Ls~ 663 (794)
++.|+.+++++|++++. + .+.++++|++|+|++|+++ .+| .+.++++|+.|+|++
T Consensus 155 --------------------l~~L~~l~l~~n~l~~i-~-~l~~l~~L~~L~Ls~N~i~-~l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 155 --------------------LTKLDTLSLEDNQISDI-V-PLAGLTKLQNLYLSKNHIS-DLR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp --------------------CTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCC-BCG-GGTTCTTCSEEEEEE
T ss_pred --------------------ccccccccccccccccc-c-cccCCCCCCEEECCCCCCC-CCh-hhcCCCCCCEEEccC
Confidence 34458899999999853 3 3889999999999999998 465 589999999999874
No 23
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.61 E-value=4.2e-15 Score=142.26 Aligned_cols=162 Identities=28% Similarity=0.438 Sum_probs=102.8
Q ss_pred CCCCCCEEeccCCCCCCCcchhHHhccccceeccCcccCCCCCCCEEEccCCcccccCChhhhhcCCCCcEEEccccccc
Q 046398 446 SQKNLSVLDISNARISDTIPRWFWNSIFQLSGIIPESFKNFSNLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFD 525 (794)
Q Consensus 446 ~l~~L~~L~Ls~n~l~~~~p~~~~~~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ip~~~~~~l~~L~~L~L~~n~l~ 525 (794)
.+.++++|++++|.++. + +.+..+++|++|++++|++++ ++. +. ++++|+.|++++|.+.
T Consensus 38 ~l~~l~~L~l~~~~i~~----------------l-~~l~~l~nL~~L~Ls~N~l~~-~~~-l~-~l~~L~~L~l~~n~~~ 97 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKS----------------I-DGVEYLNNLTQINFSNNQLTD-ITP-LK-NLTKLVDILMNNNQIA 97 (199)
T ss_dssp HHTTCCEEECTTSCCCC----------------C-TTGGGCTTCCEEECCSSCCCC-CGG-GT-TCTTCCEEECCSSCCC
T ss_pred HhcCCCEEECCCCCCCC----------------c-cccccCCCcCcCccccccccC-ccc-cc-CCcccccccccccccc
Confidence 34567777777776654 1 235566777777777777763 333 33 5777777777777766
Q ss_pred ccCCccccCCCCCCEEEccCCcCcccCCchhhccccccccccccCCCCcccccccccccccceeeEEEEeccchhhcccc
Q 046398 526 GFLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATIDSSHQSNAMSYFEVTAYDCEVLEDASIVMKGSMVEYNSIL 605 (794)
Q Consensus 526 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 605 (794)
.. + .+..+++|+.|++++|.+.... .+.. +
T Consensus 98 ~~-~-~l~~l~~L~~L~l~~~~~~~~~--~~~~----------------------------------------------l 127 (199)
T d2omxa2 98 DI-T-PLANLTNLTGLTLFNNQITDID--PLKN----------------------------------------------L 127 (199)
T ss_dssp CC-G-GGTTCTTCSEEECCSSCCCCCG--GGTT----------------------------------------------C
T ss_pred cc-c-cccccccccccccccccccccc--ccch----------------------------------------------h
Confidence 43 2 3667777777777777665321 1222 2
Q ss_pred cceeEEEcCCCccccccChhhhcccCCCEEecccccccccCCccccccCCCCEEeCCCCcCcccCcccccCCCCCCEE
Q 046398 606 NLVRIIDVSKNNFSGEIPMELTYLRGLQSLNLSHNIFTGQIPENIGNLISIESLDFSTNQLSSKISQSMSSLSFLNHL 683 (794)
Q Consensus 606 ~~L~~LdLs~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 683 (794)
+.|+.|++++|++.. ++ .+..+++|+.|++++|++++. + .++++++|+.|++++|++++ ++ .++.+++|++|
T Consensus 128 ~~L~~L~l~~n~l~~-~~-~l~~~~~L~~L~l~~n~l~~l-~-~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 128 TNLNRLELSSNTISD-IS-ALSGLTSLQQLNFSSNQVTDL-K-PLANLTTLERLDISSNKVSD-IS-VLAKLTNLESL 199 (199)
T ss_dssp TTCSEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred hhhHHhhhhhhhhcc-cc-cccccccccccccccccccCC-c-cccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCcC
Confidence 334677777777753 33 466777777777777777743 3 36777777777777777765 33 46677777664
No 24
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.57 E-value=1.4e-14 Score=138.45 Aligned_cols=160 Identities=29% Similarity=0.396 Sum_probs=106.4
Q ss_pred ccccccceeecccccCCCCCCEEeCCCCCCCCCCCCcccCCCCCCCEEEcCCCCCCCCCcccccCCccccccccCccccc
Q 046398 100 YMRSMLSGNVNPSLVDLKHLTHLDLSGNDFQGIRIPKYLGSLKNLRYLNLSGAEFAGIIPHQLGNLSNLRCLDLSWSEYA 179 (794)
Q Consensus 100 ~~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~~~~~ 179 (794)
+.++.+++.+. ..+++++++|++++|.++. + +.+..+++|++|++++|++++..| ++++++|++|++++|...
T Consensus 25 l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~--l-~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~ 97 (199)
T d2omxa2 25 LGKTNVTDTVS--QTDLDQVTTLQADRLGIKS--I-DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA 97 (199)
T ss_dssp TTCSSTTSEEC--HHHHTTCCEEECTTSCCCC--C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred hCCCCCCCccC--HHHhcCCCEEECCCCCCCC--c-cccccCCCcCcCccccccccCccc--ccCCcccccccccccccc
Confidence 33445555443 3567889999999998884 3 347788999999999999886433 888888999998877653
Q ss_pred cccccccccccCCCCccCCCCCCCEEECcCCCCCCCCCccccCCCCCCeEeeeccCCCCCCCccccCCCCCCcEEEccCC
Q 046398 180 LQVHSFSWLSGQIPNRLGNLTSLRHLDLSANKFNSTTAGWLSKFNHLEFLSLSSNGLQGTISSIGLENLTSIKTIDLSLN 259 (794)
Q Consensus 180 ~~~~~~~~~~~~lp~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~i~~~~l~~l~~L~~L~L~~~ 259 (794)
.++ .+.++++|++|++++|.+.... .+..+++|+.|++++|.+.. ++ .+..+++|++|++. +
T Consensus 98 -----------~~~-~l~~l~~L~~L~l~~~~~~~~~--~~~~l~~L~~L~l~~n~l~~-~~--~l~~~~~L~~L~l~-~ 159 (199)
T d2omxa2 98 -----------DIT-PLANLTNLTGLTLFNNQITDID--PLKNLTNLNRLELSSNTISD-IS--ALSGLTSLQQLNFS-S 159 (199)
T ss_dssp -----------CCG-GGTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCC-CG--GGTTCTTCSEEECC-S
T ss_pred -----------ccc-cccccccccccccccccccccc--ccchhhhhHHhhhhhhhhcc-cc--cccccccccccccc-c
Confidence 333 4778888888888888776543 36777888888888887652 22 35666666666666 3
Q ss_pred CCCCCCCchhhhccCCCCEEEccCCCC
Q 046398 260 FELGGPIPTSFVRLCELTSIDVSDVKL 286 (794)
Q Consensus 260 ~~~~~~~~~~l~~l~~L~~L~l~~~~l 286 (794)
+.+++. ..+.++++|+.|++++|++
T Consensus 160 n~l~~l--~~l~~l~~L~~L~ls~N~i 184 (199)
T d2omxa2 160 NQVTDL--KPLANLTTLERLDISSNKV 184 (199)
T ss_dssp SCCCCC--GGGTTCTTCCEEECCSSCC
T ss_pred ccccCC--ccccCCCCCCEEECCCCCC
Confidence 344332 1244444444444444433
No 25
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=8.1e-15 Score=148.62 Aligned_cols=180 Identities=22% Similarity=0.243 Sum_probs=91.1
Q ss_pred CCCEEECcCCCCCCCC-CccccCCCCCCeEeeeccCCCCCCCccccCCCCCCcEEEccCCCCCCCCC-chhhhccCCCCE
Q 046398 201 SLRHLDLSANKFNSTT-AGWLSKFNHLEFLSLSSNGLQGTISSIGLENLTSIKTIDLSLNFELGGPI-PTSFVRLCELTS 278 (794)
Q Consensus 201 ~L~~L~Ls~n~l~~~~-~~~l~~l~~L~~L~L~~n~l~~~i~~~~l~~l~~L~~L~L~~~~~~~~~~-~~~l~~l~~L~~ 278 (794)
+|++||++++.++... ...+..+++|++|+++++.+++.... .+..+++|++|+++++..++... ......+++|+.
T Consensus 47 ~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~-~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~ 125 (284)
T d2astb2 47 RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVN-TLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 125 (284)
T ss_dssp CCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHH-HHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHH-HHhcCCCCcCccccccccccccccchhhHHHHhccc
Confidence 4444444444433221 22234444444444444444333222 34444555555554333333211 112334566666
Q ss_pred EEccCCC-CCcch-HHHHHhhhhcCcCCccEEEeecc--ccccc-ccccccCCCCCCEEEccCC-cCcCCCCCCcCCCCC
Q 046398 279 IDVSDVK-LSQDL-SQVLDILSACGASALESLVFSSS--QISGH-LTSQLGQFKSLRTLSLDDN-CISGPLPPALGDLSS 352 (794)
Q Consensus 279 L~l~~~~-l~~~~-~~~l~~l~~~~~~~L~~L~L~~n--~l~~~-~~~~l~~l~~L~~L~L~~n-~l~~~~p~~l~~l~~ 352 (794)
|+++++. +++.. ...+.. ..+.|+.|+++++ .++.. +......+++|++|++++| .+++.....+..+++
T Consensus 126 L~ls~c~~~~~~~~~~~~~~----~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~ 201 (284)
T d2astb2 126 LNLSWCFDFTEKHVQVAVAH----VSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNY 201 (284)
T ss_dssp EECCCCTTCCHHHHHHHHHH----SCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTT
T ss_pred cccccccccccccchhhhcc----cccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCc
Confidence 6666642 32211 111111 1236777777654 23322 2222345677777777775 355555566677777
Q ss_pred CCEEEccCC-cccccCCccccCCCCCCeEeccCc
Q 046398 353 LTRLDLSRN-MLNGSIPLSLGKISHLEYLDLSNN 385 (794)
Q Consensus 353 L~~L~Ls~n-~l~~~~p~~l~~l~~L~~L~Ls~N 385 (794)
|++|++++| .+++.....++++++|++|+++++
T Consensus 202 L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 202 LQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp CCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 788887774 465555556677777888877776
No 26
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.1e-14 Score=147.77 Aligned_cols=59 Identities=19% Similarity=0.170 Sum_probs=34.3
Q ss_pred cceeEEEcCCC-ccccccChhhhcccCCCEEecccc-cccccCCccccccCCCCEEeCCCC
Q 046398 606 NLVRIIDVSKN-NFSGEIPMELTYLRGLQSLNLSHN-IFTGQIPENIGNLISIESLDFSTN 664 (794)
Q Consensus 606 ~~L~~LdLs~N-~l~~~ip~~l~~l~~L~~L~Ls~N-~l~~~ip~~l~~l~~L~~L~Ls~N 664 (794)
++|+.||+++| .+++..+..+.++++|++|+|++| .+++.....++++++|+.|+++++
T Consensus 175 ~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 175 PNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp TTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred ccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 44566666654 355555555666666666666663 455554555566666666666665
No 27
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.46 E-value=7.3e-14 Score=121.50 Aligned_cols=102 Identities=25% Similarity=0.296 Sum_probs=83.8
Q ss_pred CEEeCCCCCCCCCCCCcccCCCCCCCEEEcCCCCCCCCCcccccCCccccccccCccccccccccccccccCCCCccCCC
Q 046398 120 THLDLSGNDFQGIRIPKYLGSLKNLRYLNLSGAEFAGIIPHQLGNLSNLRCLDLSWSEYALQVHSFSWLSGQIPNRLGNL 199 (794)
Q Consensus 120 ~~L~Ls~n~l~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~~~~~~~~~~~~~~~~~lp~~l~~l 199 (794)
|+|+|++|+++. ++ .++.+++|++|++++|+++ .+|+.++.+++|++|++++|.+. .+| .+.++
T Consensus 1 R~L~Ls~n~l~~--l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-----------~l~-~~~~l 64 (124)
T d1dcea3 1 RVLHLAHKDLTV--LC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-----------NVD-GVANL 64 (124)
T ss_dssp SEEECTTSCCSS--CC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-----------CCG-GGTTC
T ss_pred CEEEcCCCCCCC--Cc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-----------ccC-ccccc
Confidence 689999999983 45 4788999999999999998 57778899999999999988765 444 57888
Q ss_pred CCCCEEECcCCCCCCCC-CccccCCCCCCeEeeeccCCC
Q 046398 200 TSLRHLDLSANKFNSTT-AGWLSKFNHLEFLSLSSNGLQ 237 (794)
Q Consensus 200 ~~L~~L~Ls~n~l~~~~-~~~l~~l~~L~~L~L~~n~l~ 237 (794)
++|++|++++|+++... ...+..+++|++|++++|+++
T Consensus 65 ~~L~~L~l~~N~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 65 PRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp SSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred cccCeEECCCCccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 99999999999888764 356788888888888888876
No 28
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.43 E-value=3.3e-13 Score=117.31 Aligned_cols=82 Identities=28% Similarity=0.380 Sum_probs=55.6
Q ss_pred eEEEcCCCccccccChhhhcccCCCEEecccccccccCCccccccCCCCEEeCCCCcCcccC-cccccCCCCCCEEeCcC
Q 046398 609 RIIDVSKNNFSGEIPMELTYLRGLQSLNLSHNIFTGQIPENIGNLISIESLDFSTNQLSSKI-SQSMSSLSFLNHLNVSN 687 (794)
Q Consensus 609 ~~LdLs~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~ls~ 687 (794)
++||+++|+++ .+|+.++.+++|+.|++++|+|+ .+| .++++++|+.|++++|+++... +..+..+++|++|++++
T Consensus 23 ~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L~~L~l~~ 99 (124)
T d1dcea3 23 THLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQG 99 (124)
T ss_dssp CEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTT
T ss_pred CEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCCccCCCCCchhhcCCCCCCEEECCC
Confidence 66666666666 45666777777777777777776 344 3677777777777777776543 24566777777777777
Q ss_pred Cccccc
Q 046398 688 NLLTGK 693 (794)
Q Consensus 688 N~l~g~ 693 (794)
|++++.
T Consensus 100 N~i~~~ 105 (124)
T d1dcea3 100 NSLCQE 105 (124)
T ss_dssp SGGGGS
T ss_pred CcCCcC
Confidence 777643
No 29
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=2.3e-13 Score=124.54 Aligned_cols=64 Identities=19% Similarity=0.189 Sum_probs=37.2
Q ss_pred cCCCCCCCEEEccCCcccccCChhhhhcCCCCcEEEcccccccccCCccccCCCCCCEEEccCCcCcc
Q 046398 483 FKNFSNLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSG 550 (794)
Q Consensus 483 l~~l~~L~~L~Ls~n~l~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 550 (794)
+.++.++++|+|++|+|+ .++.. +..+++|+.|+|++|+++.. +.+..+++|++|++++|+++.
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~-~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~ 77 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENL-GATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR 77 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCG-GGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE
T ss_pred ccCcCcCcEEECCCCCCC-ccCcc-ccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccC
Confidence 445566677777777766 45543 23466666666666666533 235556666666666665553
No 30
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.42 E-value=1.8e-14 Score=150.90 Aligned_cols=261 Identities=13% Similarity=0.128 Sum_probs=161.1
Q ss_pred CCccccCCCCCCeEeccCcccccccCh---hhhcCCCCCCEEECcCCcceeEcCCCCcCccccceEecccccCCCCCCcc
Q 046398 367 IPLSLGKISHLEYLDLSNNKMNGTLSE---IHFVNLTKLTWFSASGNSLILQVNPNWVPPFQLKTLLLMSCHLGPQFPSW 443 (794)
Q Consensus 367 ~p~~l~~l~~L~~L~Ls~N~l~~~~~~---~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 443 (794)
+...+....+|+.|+|++|.+...-.. ..+...++|+.++++++......... ......+...
T Consensus 23 l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~--------------~~~~~~l~~~ 88 (344)
T d2ca6a1 23 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEI--------------PEALRLLLQA 88 (344)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGS--------------HHHHHHHHHH
T ss_pred HHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCccccccccc--------------chHHHHHHHH
Confidence 344566678888888888877532111 13445566666666655321100000 0000012233
Q ss_pred cCCCCCCCEEeccCCCCCCCcchhHHhccccceeccCcccCCCCCCCEEEccCCcccccCChhh------------hhcC
Q 046398 444 LHSQKNLSVLDISNARISDTIPRWFWNSIFQLSGIIPESFKNFSNLEVLNLGDNEFVGKIPTWM------------GEGF 511 (794)
Q Consensus 444 l~~l~~L~~L~Ls~n~l~~~~p~~~~~~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ip~~~------------~~~l 511 (794)
+..+++|+.|++++|.+...-... +...+..+++|+.|++++|.+.......+ ....
T Consensus 89 l~~~~~L~~L~L~~n~i~~~~~~~-----------l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~ 157 (344)
T d2ca6a1 89 LLKCPKLHTVRLSDNAFGPTAQEP-----------LIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNA 157 (344)
T ss_dssp HTTCTTCCEEECCSCCCCTTTHHH-----------HHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HhhCCCcccccccccccccccccc-----------hhhhhcccccchheecccccccccccccccccccccccccccccC
Confidence 556778888999888877532211 22344567788999999887753211111 1245
Q ss_pred CCCcEEEccccccccc----CCccccCCCCCCEEEccCCcCcccCCchhhccccccccccccCCCCcccccccccccccc
Q 046398 512 TSLLILILRSNKFDGF----LPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATIDSSHQSNAMSYFEVTAYDCEVL 587 (794)
Q Consensus 512 ~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~l 587 (794)
+.|+.+.+++|++... +...+...+.|+.|++++|++...-...+
T Consensus 158 ~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~------------------------------- 206 (344)
T d2ca6a1 158 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHL------------------------------- 206 (344)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHH-------------------------------
T ss_pred cccceeecccccccccccccccchhhhhhhhcccccccccccccccccc-------------------------------
Confidence 7888888888887643 23345567889999999888763200000
Q ss_pred eeeEEEEeccchhhcccccceeEEEcCCCccccc----cChhhhcccCCCEEecccccccccCCccc----cc--cCCCC
Q 046398 588 EDASIVMKGSMVEYNSILNLVRIIDVSKNNFSGE----IPMELTYLRGLQSLNLSHNIFTGQIPENI----GN--LISIE 657 (794)
Q Consensus 588 ~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~----ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l----~~--l~~L~ 657 (794)
........+.|+.|++++|.++.. +...+..+++|++|+|++|.+++.-...+ .. .+.|+
T Consensus 207 ----------l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~ 276 (344)
T d2ca6a1 207 ----------LLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQ 276 (344)
T ss_dssp ----------HHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCC
T ss_pred ----------hhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCC
Confidence 001122345678999999998643 45567788999999999999986433333 22 36799
Q ss_pred EEeCCCCcCccc----Cccccc-CCCCCCEEeCcCCccccc
Q 046398 658 SLDFSTNQLSSK----ISQSMS-SLSFLNHLNVSNNLLTGK 693 (794)
Q Consensus 658 ~L~Ls~N~l~~~----~p~~l~-~l~~L~~L~ls~N~l~g~ 693 (794)
+||+++|+++.. +...+. +.+.|++|++++|.+...
T Consensus 277 ~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~ 317 (344)
T d2ca6a1 277 TLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 317 (344)
T ss_dssp EEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred EEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCCc
Confidence 999999998763 333343 578899999999998654
No 31
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=2e-13 Score=124.90 Aligned_cols=126 Identities=17% Similarity=0.105 Sum_probs=90.2
Q ss_pred cCCCCcEEEcccccccccCCccccCCCCCCEEEccCCcCcccCCchhhccccccccccccCCCCccccccccccccccee
Q 046398 510 GFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATIDSSHQSNAMSYFEVTAYDCEVLED 589 (794)
Q Consensus 510 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~l~~ 589 (794)
+..++++|+|++|+++.. +..+..+++|+.||+++|+++.. + .+..
T Consensus 16 n~~~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N~i~~l-~-~~~~------------------------------- 61 (162)
T d1a9na_ 16 NAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL-D-GFPL------------------------------- 61 (162)
T ss_dssp CTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE-C-CCCC-------------------------------
T ss_pred CcCcCcEEECCCCCCCcc-CccccccccCCEEECCCCCCCcc-C-Cccc-------------------------------
Confidence 466788888888888754 55667788888888888888732 2 1222
Q ss_pred eEEEEeccchhhcccccceeEEEcCCCccccccChhhhcccCCCEEecccccccccCC--ccccccCCCCEEeCCCCcCc
Q 046398 590 ASIVMKGSMVEYNSILNLVRIIDVSKNNFSGEIPMELTYLRGLQSLNLSHNIFTGQIP--ENIGNLISIESLDFSTNQLS 667 (794)
Q Consensus 590 ~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~ip--~~l~~l~~L~~L~Ls~N~l~ 667 (794)
++.|+.|++++|+++...+..+..+++|+.|++++|+++. ++ ..+..+++|+.|++++|+++
T Consensus 62 ---------------l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 62 ---------------LRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp ---------------CSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG
T ss_pred ---------------CcchhhhhcccccccCCCccccccccccccceeccccccc-cccccccccccccchhhcCCCccc
Confidence 3345788888888886555556678888888888888873 33 35777888888888888886
Q ss_pred ccC---cccccCCCCCCEEeC
Q 046398 668 SKI---SQSMSSLSFLNHLNV 685 (794)
Q Consensus 668 ~~~---p~~l~~l~~L~~L~l 685 (794)
... +..+..+++|++||-
T Consensus 126 ~~~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 126 NKKHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp GSTTHHHHHHHHCTTCSEETT
T ss_pred cccchHHHHHHHCCCcCeeCC
Confidence 532 234677788888773
No 32
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.37 E-value=2.7e-14 Score=149.55 Aligned_cols=99 Identities=29% Similarity=0.377 Sum_probs=54.7
Q ss_pred ccccCCCCCCEEeCCCCCCCCC---CCCcccCCCCCCCEEEcCCCCCCCC---CcccccCCccccccccCcccccccccc
Q 046398 111 PSLVDLKHLTHLDLSGNDFQGI---RIPKYLGSLKNLRYLNLSGAEFAGI---IPHQLGNLSNLRCLDLSWSEYALQVHS 184 (794)
Q Consensus 111 ~~l~~l~~L~~L~Ls~n~l~~~---~~p~~~~~l~~L~~L~Ls~n~l~~~---~p~~l~~l~~L~~L~Ls~~~~~~~~~~ 184 (794)
..+.+.+.|++|+|++|.+... .+...+...++|+.|+++++..... .|..+.
T Consensus 25 ~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~--------------------- 83 (344)
T d2ca6a1 25 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALR--------------------- 83 (344)
T ss_dssp HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHH---------------------
T ss_pred HHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHH---------------------
Confidence 3456677888888888876531 1234456677788888877654311 111110
Q ss_pred ccccccCCCCccCCCCCCCEEECcCCCCCCCCCc----cccCCCCCCeEeeeccCC
Q 046398 185 FSWLSGQIPNRLGNLTSLRHLDLSANKFNSTTAG----WLSKFNHLEFLSLSSNGL 236 (794)
Q Consensus 185 ~~~~~~~lp~~l~~l~~L~~L~Ls~n~l~~~~~~----~l~~l~~L~~L~L~~n~l 236 (794)
.+...+..+++|++|+|++|.++..... .+...++|++|++++|.+
T Consensus 84 ------~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l 133 (344)
T d2ca6a1 84 ------LLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGL 133 (344)
T ss_dssp ------HHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCC
T ss_pred ------HHHHHHhhCCCcccccccccccccccccchhhhhcccccchheecccccc
Confidence 1122344456666677776666554322 233456666666666654
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.26 E-value=2.8e-13 Score=128.62 Aligned_cols=142 Identities=19% Similarity=0.260 Sum_probs=89.5
Q ss_pred CCEEEccCC--cccccCChhhhhcCCCCcEEEcccccccccCCccccCCCCCCEEEccCCcCcccCCchhhccccccccc
Q 046398 489 LEVLNLGDN--EFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATID 566 (794)
Q Consensus 489 L~~L~Ls~n--~l~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ 566 (794)
++.+++.++ .+. .+|..+. .+++|+.|+|++|+++.. + .+..+++|++|++++|+++ .+|..+..
T Consensus 25 ~~~~~l~~~~~~i~-~l~~sl~-~L~~L~~L~Ls~n~I~~i-~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~-------- 91 (198)
T d1m9la_ 25 AEKVELHGMIPPIE-KMDATLS-TLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIK-KIENLDAV-------- 91 (198)
T ss_dssp CSCEECCBCCTTCC-CCHHHHH-HTTTCCEEECSEEEESCC-C-CHHHHTTCCEEECCEEEEC-SCSSHHHH--------
T ss_pred cceeeeecccCchh-hhhhHHh-cccccceeECcccCCCCc-c-cccCCccccChhhcccccc-cccccccc--------
Confidence 444555433 232 3444554 577788888888877743 3 4677778888888888775 33332222
Q ss_pred cccCCCCcccccccccccccceeeEEEEeccchhhcccccceeEEEcCCCccccccChhhhcccCCCEEecccccccccC
Q 046398 567 SSHQSNAMSYFEVTAYDCEVLEDASIVMKGSMVEYNSILNLVRIIDVSKNNFSGEIPMELTYLRGLQSLNLSHNIFTGQI 646 (794)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~i 646 (794)
++.|+.|++++|+++. + +.+..+++|+.|++++|+++. +
T Consensus 92 --------------------------------------~~~L~~L~l~~N~i~~-l-~~~~~l~~L~~L~L~~N~i~~-~ 130 (198)
T d1m9la_ 92 --------------------------------------ADTLEELWISYNQIAS-L-SGIEKLVNLRVLYMSNNKITN-W 130 (198)
T ss_dssp --------------------------------------HHHCCEEECSEEECCC-H-HHHHHHHHSSEEEESEEECCC-H
T ss_pred --------------------------------------cccccccccccccccc-c-ccccccccccccccccchhcc-c
Confidence 2234777777777764 3 346777788888888888773 3
Q ss_pred C--ccccccCCCCEEeCCCCcCcccCccc----------ccCCCCCCEEe
Q 046398 647 P--ENIGNLISIESLDFSTNQLSSKISQS----------MSSLSFLNHLN 684 (794)
Q Consensus 647 p--~~l~~l~~L~~L~Ls~N~l~~~~p~~----------l~~l~~L~~L~ 684 (794)
+ +.+..+++|+.|+|++|++....+.. +..+++|+.||
T Consensus 131 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 131 GEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp HHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred cccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 3 35677778888888888776544432 45667777766
No 34
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.18 E-value=1e-12 Score=124.64 Aligned_cols=135 Identities=21% Similarity=0.271 Sum_probs=99.0
Q ss_pred cCcccCCCCCCCEEEccCCcccccCChhhhhcCCCCcEEEcccccccccCCccccCCCCCCEEEccCCcCcccCCchhhc
Q 046398 479 IPESFKNFSNLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVNN 558 (794)
Q Consensus 479 ~p~~l~~l~~L~~L~Ls~n~l~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 558 (794)
++..+..+++|++|+|++|+++ .++. +. .+++|+.|+|++|+++. +|..+..+++|++|++++|+++.. + .+..
T Consensus 40 l~~sl~~L~~L~~L~Ls~n~I~-~i~~-l~-~l~~L~~L~Ls~N~i~~-i~~~~~~~~~L~~L~l~~N~i~~l-~-~~~~ 113 (198)
T d1m9la_ 40 MDATLSTLKACKHLALSTNNIE-KISS-LS-GMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIASL-S-GIEK 113 (198)
T ss_dssp CHHHHHHTTTCCEEECSEEEES-CCCC-HH-HHTTCCEEECCEEEECS-CSSHHHHHHHCCEEECSEEECCCH-H-HHHH
T ss_pred hhhHHhcccccceeECcccCCC-Cccc-cc-CCccccChhhccccccc-cccccccccccccccccccccccc-c-cccc
Confidence 4456777889999999999987 6653 43 68899999999999874 455555567899999999988732 1 2333
Q ss_pred cccccccccccCCCCcccccccccccccceeeEEEEeccchhhcccccceeEEEcCCCccccccC-hhhhcccCCCEEec
Q 046398 559 FSAMATIDSSHQSNAMSYFEVTAYDCEVLEDASIVMKGSMVEYNSILNLVRIIDVSKNNFSGEIP-MELTYLRGLQSLNL 637 (794)
Q Consensus 559 l~~L~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~ip-~~l~~l~~L~~L~L 637 (794)
+++|+.|++++|+++.... ..+..+++|+.|+|
T Consensus 114 ----------------------------------------------l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L 147 (198)
T d1m9la_ 114 ----------------------------------------------LVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLL 147 (198)
T ss_dssp ----------------------------------------------HHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEE
T ss_pred ----------------------------------------------cccccccccccchhccccccccccCCCccceeec
Confidence 3345889999999874322 46788999999999
Q ss_pred ccccccccCCcc----------ccccCCCCEEeCCCCcCc
Q 046398 638 SHNIFTGQIPEN----------IGNLISIESLDFSTNQLS 667 (794)
Q Consensus 638 s~N~l~~~ip~~----------l~~l~~L~~L~Ls~N~l~ 667 (794)
++|.++...+.. +..+++|+.|| +..++
T Consensus 148 ~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD--~~~I~ 185 (198)
T d1m9la_ 148 AGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp CSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES--SGGGT
T ss_pred CCCccccCcccccchhhHHHHHHHHCCCcCEeC--CccCC
Confidence 999987554432 56789999987 44444
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14 E-value=6.8e-11 Score=106.98 Aligned_cols=58 Identities=24% Similarity=0.288 Sum_probs=28.5
Q ss_pred eEEEcCCCccccccChhhhcccCCCEEecccccccccCCccccccCCCCEEeCCCCcCc
Q 046398 609 RIIDVSKNNFSGEIPMELTYLRGLQSLNLSHNIFTGQIPENIGNLISIESLDFSTNQLS 667 (794)
Q Consensus 609 ~~LdLs~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~ 667 (794)
+.|++++|+|+...|..|..+++|++|+|++|+|+ .+|.......+|+.|+|++|++.
T Consensus 59 ~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 59 RNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp SEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-CCCSTTTCSCCCCEEECCSSCCC
T ss_pred CcceeeccccCCcccccccccccccceeccCCCCc-ccChhhhccccccccccCCCccc
Confidence 34444444444344444555555555555555555 33333223334556666666553
No 36
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=1.2e-10 Score=105.42 Aligned_cols=85 Identities=19% Similarity=0.155 Sum_probs=71.0
Q ss_pred ceeEEEcCCC-ccccccChhhhcccCCCEEecccccccccCCccccccCCCCEEeCCCCcCcccCcccccCCCCCCEEeC
Q 046398 607 LVRIIDVSKN-NFSGEIPMELTYLRGLQSLNLSHNIFTGQIPENIGNLISIESLDFSTNQLSSKISQSMSSLSFLNHLNV 685 (794)
Q Consensus 607 ~L~~LdLs~N-~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l 685 (794)
+++.|++++| .++...+..|.++++|+.|+|++|+|+...|..|..+++|++|+|++|+|+...+..+..+ .|+.|+|
T Consensus 32 ~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~~-~l~~L~L 110 (156)
T d2ifga3 32 NLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGL-SLQELVL 110 (156)
T ss_dssp CCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSC-CCCEEEC
T ss_pred ccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhccc-ccccccc
Confidence 3477788655 4776666779999999999999999997778889999999999999999997666666555 6999999
Q ss_pred cCCcccc
Q 046398 686 SNNLLTG 692 (794)
Q Consensus 686 s~N~l~g 692 (794)
++|++..
T Consensus 111 ~~Np~~C 117 (156)
T d2ifga3 111 SGNPLHC 117 (156)
T ss_dssp CSSCCCC
T ss_pred CCCcccC
Confidence 9999863
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.23 E-value=3.6e-08 Score=89.28 Aligned_cols=124 Identities=23% Similarity=0.143 Sum_probs=72.4
Q ss_pred CCCEEeCCCCCCCCCCCCcccCCCCCCCEEEcCCCCCCCCCcccccCCccccccccCccccccccccccccccCCCCccC
Q 046398 118 HLTHLDLSGNDFQGIRIPKYLGSLKNLRYLNLSGAEFAGIIPHQLGNLSNLRCLDLSWSEYALQVHSFSWLSGQIPNRLG 197 (794)
Q Consensus 118 ~L~~L~Ls~n~l~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~~~~~~~~~~~~~~~~~lp~~l~ 197 (794)
..+.||+++.... +.+..+..+..++...+... .++..+.++++|++|+|++|++. -...++..+.
T Consensus 23 ~~~~Ldls~l~~~-----~~l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~--------~l~~~~~~~~ 88 (162)
T d1koha1 23 SQQALDLKGLRSD-----PDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLY--------RLDDMSSIVQ 88 (162)
T ss_dssp SSCCBCCCCCSSC-----TTTTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCC--------CCSGGGTHHH
T ss_pred hhCeeecccCCCC-----chhhhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCcccc--------CCchhHHHHh
Confidence 3455666655422 12333444444544444322 33444456788888888887765 1112334456
Q ss_pred CCCCCCEEECcCCCCCCCCCccccCCCCCCeEeeeccCCCCCCCc------cccCCCCCCcEEE
Q 046398 198 NLTSLRHLDLSANKFNSTTAGWLSKFNHLEFLSLSSNGLQGTISS------IGLENLTSIKTID 255 (794)
Q Consensus 198 ~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~i~~------~~l~~l~~L~~L~ 255 (794)
.+++|+.|++++|.++...+-......+|++|++++|++...... ..+..+|+|+.||
T Consensus 89 ~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 89 KAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp HSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred hCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence 678888888888888776554444556788888888887654332 1244566666665
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.22 E-value=5.1e-08 Score=88.26 Aligned_cols=80 Identities=19% Similarity=0.158 Sum_probs=43.9
Q ss_pred ccceeEEEcCCCccccc--cChhhhcccCCCEEecccccccccCCccccccCCCCEEeCCCCcCcccCcc-------ccc
Q 046398 605 LNLVRIIDVSKNNFSGE--IPMELTYLRGLQSLNLSHNIFTGQIPENIGNLISIESLDFSTNQLSSKISQ-------SMS 675 (794)
Q Consensus 605 l~~L~~LdLs~N~l~~~--ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~-------~l~ 675 (794)
++.|++|||++|+++.. ++..+..+++|+.|+|++|+|+...+-.......|+.|++++|++...... .+.
T Consensus 64 ~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~ 143 (162)
T d1koha1 64 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRE 143 (162)
T ss_dssp CTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHT
T ss_pred CCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHHH
Confidence 34445566666666532 234455666777777777776632221223334566777777766654332 244
Q ss_pred CCCCCCEEe
Q 046398 676 SLSFLNHLN 684 (794)
Q Consensus 676 ~l~~L~~L~ 684 (794)
.+|+|+.||
T Consensus 144 ~~P~L~~LD 152 (162)
T d1koha1 144 RFPKLLRLD 152 (162)
T ss_dssp TSTTCCEET
T ss_pred HCCCCCEEC
Confidence 566666665
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.50 E-value=3.4e-05 Score=69.44 Aligned_cols=63 Identities=16% Similarity=0.096 Sum_probs=31.1
Q ss_pred hcccCCCEEecccccccccC----CccccccCCCCEEeCCCCcCccc-------CcccccCCCCCCEEeCcCCc
Q 046398 627 TYLRGLQSLNLSHNIFTGQI----PENIGNLISIESLDFSTNQLSSK-------ISQSMSSLSFLNHLNVSNNL 689 (794)
Q Consensus 627 ~~l~~L~~L~Ls~N~l~~~i----p~~l~~l~~L~~L~Ls~N~l~~~-------~p~~l~~l~~L~~L~ls~N~ 689 (794)
...+.|++|+|++|.++..- -..+...++|+.|++++|.+... +...+..-++|+.|+++++.
T Consensus 69 ~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 69 ETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred hhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence 33455555555555554321 12234445566666665543321 33344445666666666554
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.40 E-value=3.4e-05 Score=69.45 Aligned_cols=60 Identities=12% Similarity=0.123 Sum_probs=33.5
Q ss_pred ceeEEEcCCCccccc----cChhhhcccCCCEEecccccccc-------cCCccccccCCCCEEeCCCCcC
Q 046398 607 LVRIIDVSKNNFSGE----IPMELTYLRGLQSLNLSHNIFTG-------QIPENIGNLISIESLDFSTNQL 666 (794)
Q Consensus 607 ~L~~LdLs~N~l~~~----ip~~l~~l~~L~~L~Ls~N~l~~-------~ip~~l~~l~~L~~L~Ls~N~l 666 (794)
.|+.|++++|.++.. +-..+...++|++|+|++|++.. .+.+.+...++|+.|+++.+..
T Consensus 73 ~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 73 SLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 143 (167)
T ss_dssp SCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred cccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCCc
Confidence 345666666665532 22234455667777777765442 1233444567777777766543
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.64 E-value=0.0003 Score=62.88 Aligned_cols=18 Identities=11% Similarity=0.095 Sum_probs=9.4
Q ss_pred ccCCCCCCEEEccCCcCc
Q 046398 532 LCRLTSLQILDVANNSLS 549 (794)
Q Consensus 532 ~~~l~~L~~L~Ls~N~l~ 549 (794)
+...++|++|++++|.++
T Consensus 42 l~~n~~L~~L~Ls~n~l~ 59 (166)
T d1io0a_ 42 LKTNTYVKKFSIVGTRSN 59 (166)
T ss_dssp HTTCCSCCEEECTTSCCC
T ss_pred HhcCCccCeeeccCCccc
Confidence 334455555555555543
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.62 E-value=0.00055 Score=61.12 Aligned_cols=87 Identities=16% Similarity=0.198 Sum_probs=64.8
Q ss_pred ccceeEEEcCCCccccc----cChhhhcccCCCEEeccccccccc----CCccccccCCCCEEeC--CCCcCcc----cC
Q 046398 605 LNLVRIIDVSKNNFSGE----IPMELTYLRGLQSLNLSHNIFTGQ----IPENIGNLISIESLDF--STNQLSS----KI 670 (794)
Q Consensus 605 l~~L~~LdLs~N~l~~~----ip~~l~~l~~L~~L~Ls~N~l~~~----ip~~l~~l~~L~~L~L--s~N~l~~----~~ 670 (794)
.+.|+.|++++|.++.. +-..+...+.++.+++++|.++.. +-+.+...++|+.++| ++|.+.. .+
T Consensus 45 n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~L 124 (166)
T d1io0a_ 45 NTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEI 124 (166)
T ss_dssp CCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHH
T ss_pred CCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHH
Confidence 45568999999998754 334456779999999999998643 3356677889987555 5677765 35
Q ss_pred cccccCCCCCCEEeCcCCccc
Q 046398 671 SQSMSSLSFLNHLNVSNNLLT 691 (794)
Q Consensus 671 p~~l~~l~~L~~L~ls~N~l~ 691 (794)
...+...+.|+.|+++.++..
T Consensus 125 a~~L~~n~~L~~L~l~~~~~~ 145 (166)
T d1io0a_ 125 ANMLEKNTTLLKFGYHFTQQG 145 (166)
T ss_dssp HHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCcCEEeCcCCCCc
Confidence 556778899999999887654
Done!