BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046401
(127 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2
SV=1
Length = 127
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 59/91 (64%), Gaps = 19/91 (20%)
Query: 39 DLVTRLEVSEGLTECWNTLMELKSCSNEIVIFFLNSQAD------------TRNCWPAML 86
++ RL+ S GL ECWN L ELKSC+NEIV+FFLN + T NCWPAML
Sbjct: 35 NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93
Query: 87 TSLGFTAEEGNILRGYC------DASSAPSP 111
TSLGFT EE N+LRG+C D+S APSP
Sbjct: 94 TSLGFTPEEANVLRGFCQNPNSGDSSPAPSP 124
>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2
SV=1
Length = 125
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 12/69 (17%)
Query: 49 GLTECWNTLMELKSCSNEIVIFFLNSQAD------------TRNCWPAMLTSLGFTAEEG 96
GL ECWN L ELKSC+NEIV+FFLN + T +CWPAMLTSLGFT++E
Sbjct: 42 GLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDET 101
Query: 97 NILRGYCDA 105
N+LRG+C +
Sbjct: 102 NVLRGFCQS 110
>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2
SV=1
Length = 125
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 67/120 (55%), Gaps = 21/120 (17%)
Query: 7 FFILAFTCLIIANIANATSRNDRLNNNMKPCNDLVTRLEVSEGLTECWNTLMELKSCSNE 66
F + T L++ N+++ R + ++ RL GL +CW+ L ELKSC+NE
Sbjct: 7 FLFVTVTLLLVLNVSS------RALPPVADSTNIAARL-TGGGLMQCWDALYELKSCTNE 59
Query: 67 IVIFFLNSQAD------------TRNCWPAMLTSLGFTAEEGNILRGYCDA--SSAPSPS 112
IV+FFLN + T +CWPAMLTSLGFT EE N+LRG+C + S SP+
Sbjct: 60 IVLFFLNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEETNVLRGFCQSPNSGGSSPA 119
>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2
SV=1
Length = 158
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 12/82 (14%)
Query: 36 PCNDLVTRLEVSEGLTECWNTLMELKSCSNEIVIFFLNSQAD------------TRNCWP 83
P LV RL++ E CW++LM+L+ CS E+++FFLN + R CWP
Sbjct: 40 PTTSLVYRLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWP 99
Query: 84 AMLTSLGFTAEEGNILRGYCDA 105
M+ LGFTA+EG++L+GYCD
Sbjct: 100 TMIGVLGFTAQEGDMLQGYCDG 121
>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2
SV=1
Length = 155
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 27/94 (28%)
Query: 50 LTECWNTLMELKSCSNEIVIFFLNSQADT--------------------RNCWPAMLTSL 89
L +CWN +ELKSC++EIV FFL+ + ++CW M TSL
Sbjct: 50 LMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVKDCWSVMFTSL 109
Query: 90 GFTAEEGNILRGYC-------DASSAPSPSGIAV 116
G T EGN LR YC + S +P+P +A+
Sbjct: 110 GLTTMEGNNLREYCEFQAEKSELSPSPAPETLAL 143
>sp|Q9YFZ1|RAD50_AERPE DNA double-strand break repair Rad50 ATPase OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=rad50 PE=3 SV=1
Length = 919
Score = 29.3 bits (64), Expect = 7.0, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 17 IANIANATSRNDRLNNNMKPCNDLVTRLEVSEGLT-------ECWNTLMELKSCSNE 66
+A +A SR D+L +++ D V +LEVS L E N L+E +S E
Sbjct: 317 VAELARLQSRLDKLGRDLEMIRDAVEKLEVSRRLKEIESARREAENRLLEARSSIKE 373
>sp|Q55E65|Y0496_DICDI Putative uncharacterized protein DDB_G0270496 OS=Dictyostelium
discoideum GN=DDB_G0270496 PE=3 SV=2
Length = 523
Score = 29.3 bits (64), Expect = 7.5, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 13 TCLIIANIANATSRNDRLNNNMKPCNDLVTRLEVSEGLTECWNTLMELKSCSNEIVIFFL 72
+CL+I+ + N S LN+ + R+ + L+E WNT+ E N+ + F
Sbjct: 283 SCLLISELYNLQSELIDLNDEIPKQQQSKKRIRPDQSLSEIWNTIEE----QNQRLDQFH 338
Query: 73 NSQADTRNCWPAMLTSLGFTAEEGNILR 100
N N ++ +S+ + GN L+
Sbjct: 339 NQTITKWNNRISVTSSINSGGKGGNNLK 366
>sp|Q9F364|NADA_STRCO Quinolinate synthase A OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=nadA PE=3 SV=2
Length = 394
Score = 29.3 bits (64), Expect = 7.5, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 13/65 (20%)
Query: 44 LEVSEGLTECWNTLMELKSCSNEIVIFFLNSQADTRNCWPAMLTSLGFTAEEGNILRGYC 103
+ +E + ECW+ L E + + ++NS AD + FT + G + C
Sbjct: 136 MATAEQVAECWDVLTEAGIAEQVVPVSYMNSSADIK----------AFTGKHGGTI---C 182
Query: 104 DASSA 108
+S+A
Sbjct: 183 TSSNA 187
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,596,798
Number of Sequences: 539616
Number of extensions: 1313526
Number of successful extensions: 3039
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3024
Number of HSP's gapped (non-prelim): 11
length of query: 127
length of database: 191,569,459
effective HSP length: 93
effective length of query: 34
effective length of database: 141,385,171
effective search space: 4807095814
effective search space used: 4807095814
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)