Query 046401
Match_columns 127
No_of_seqs 41 out of 43
Neff 2.7
Searched_HMMs 13730
Date Mon Mar 25 20:40:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046401.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046401hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bdsa_ g.9.1.1 (A:) BDs-I def 24.1 7 0.00051 22.8 -0.2 12 74-85 25-38 (43)
2 d1j5ja_ g.3.7.2 (A:) Bekm-1 {L 14.3 21 0.0015 20.1 0.3 25 78-104 10-34 (36)
3 d2daha1 a.5.2.1 (A:8-48) Ubiqu 13.1 31 0.0022 19.4 0.9 14 85-98 8-21 (41)
4 d2cqea2 g.66.1.1 (A:429-457) Z 12.8 28 0.0021 18.8 0.6 9 99-107 13-21 (29)
5 d1v97a2 d.15.4.2 (A:3-92) Xant 12.8 4.1 0.0003 26.3 -3.5 17 68-84 4-21 (90)
6 d1yioa1 a.4.6.2 (A:131-200) Re 11.3 36 0.0026 19.8 0.8 17 90-106 12-28 (70)
7 d1fsea_ a.4.6.2 (A:) Germinati 10.7 36 0.0026 19.3 0.7 16 91-106 5-20 (67)
8 d2hpqp_ g.14.1.1 (P:) Meizothr 10.3 60 0.0044 19.4 1.7 34 73-106 5-53 (79)
9 d2al6a2 b.55.1.5 (A:254-363) F 10.3 31 0.0022 23.0 0.3 10 96-105 88-97 (110)
10 d1xk7a1 c.123.1.1 (A:4-405) Cr 9.4 51 0.0037 23.8 1.2 17 84-100 377-393 (402)
No 1
>d1bdsa_ g.9.1.1 (A:) BDs-I defensin {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=24.14 E-value=7 Score=22.82 Aligned_cols=12 Identities=42% Similarity=1.055 Sum_probs=8.7
Q ss_pred CcCCCCCc--hhhH
Q 046401 74 SQADTRNC--WPAM 85 (127)
Q Consensus 74 Get~~~~C--WP~M 85 (127)
|--|+.+| ||++
T Consensus 25 gygytsncykwpni 38 (43)
T d1bdsa_ 25 GYGYTSNCYKWPNI 38 (43)
T ss_dssp TTCCCCEEEETTEE
T ss_pred CcccccccccCCcc
Confidence 45568888 8875
No 2
>d1j5ja_ g.3.7.2 (A:) Bekm-1 {Lesser asian scorpion (Buthus eupeus) [TaxId: 34648]}
Probab=14.25 E-value=21 Score=20.13 Aligned_cols=25 Identities=32% Similarity=0.879 Sum_probs=16.2
Q ss_pred CCCchhhHhhhcCCCcchhhhhhhccc
Q 046401 78 TRNCWPAMLTSLGFTAEEGNILRGYCD 104 (127)
Q Consensus 78 ~~~CWP~Ml~slGFT~eE~diLrGyCd 104 (127)
..+|||.--.-.|=+ .+.-..|+||
T Consensus 10 s~qc~pvck~~fgk~--ng~c~ng~c~ 34 (36)
T d1j5ja_ 10 SYQCFPVCKSRFGKT--NGRCVNGFCD 34 (36)
T ss_dssp GGGHHHHHHHHTCCS--CEEEETTEEE
T ss_pred ccchhHHHHHHcCCC--CCceeCCeec
Confidence 568999544444444 3667778886
No 3
>d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.09 E-value=31 Score=19.36 Aligned_cols=14 Identities=43% Similarity=0.736 Sum_probs=11.4
Q ss_pred HhhhcCCCcchhhh
Q 046401 85 MLTSLGFTAEEGNI 98 (127)
Q Consensus 85 Ml~slGFT~eE~di 98 (127)
-|...||+.+|.++
T Consensus 8 ~L~~MGF~d~~~Ni 21 (41)
T d2daha1 8 QLRSMGFLNREANL 21 (41)
T ss_dssp HHHHHTCCCHHHHH
T ss_pred HHHHcCCCCHHHHH
Confidence 46778999999875
No 4
>d2cqea2 g.66.1.1 (A:429-457) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.81 E-value=28 Score=18.78 Aligned_cols=9 Identities=22% Similarity=0.970 Sum_probs=7.0
Q ss_pred hhhcccCCC
Q 046401 99 LRGYCDASS 107 (127)
Q Consensus 99 LrGyCd~~~ 107 (127)
++|||..+.
T Consensus 13 vqGyCtrge 21 (29)
T d2cqea2 13 ITGFCARAE 21 (29)
T ss_dssp TTTCCSCST
T ss_pred eeeeecCCc
Confidence 689998764
No 5
>d1v97a2 d.15.4.2 (A:3-92) Xanthine oxidase, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=12.77 E-value=4.1 Score=26.30 Aligned_cols=17 Identities=29% Similarity=0.636 Sum_probs=13.8
Q ss_pred HHHHhcCcCC-CCCchhh
Q 046401 68 VIFFLNSQAD-TRNCWPA 84 (127)
Q Consensus 68 vlFFLnGet~-~~~CWP~ 84 (127)
+.|+|||+.+ ..+.+|.
T Consensus 4 i~F~lNG~~~~~~~~~p~ 21 (90)
T d1v97a2 4 LVFFVNGKKVVEKNADPE 21 (90)
T ss_dssp EEEEETTEEEEETTCCTT
T ss_pred EEEEECCEEEEEccCCCC
Confidence 4699999987 5788994
No 6
>d1yioa1 a.4.6.2 (A:131-200) Response regulatory protein StyR, C-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=11.26 E-value=36 Score=19.78 Aligned_cols=17 Identities=18% Similarity=0.167 Sum_probs=15.1
Q ss_pred CCCcchhhhhhhcccCC
Q 046401 90 GFTAEEGNILRGYCDAS 106 (127)
Q Consensus 90 GFT~eE~diLrGyCd~~ 106 (127)
++|+.|.+||+.++++-
T Consensus 12 ~LT~rE~~vl~~l~~G~ 28 (70)
T d1yioa1 12 SLTGREQQVLQLTIRGL 28 (70)
T ss_dssp TSCHHHHHHHHHHTTTC
T ss_pred cCCHHHHHHHHHHHcCC
Confidence 68999999999999765
No 7
>d1fsea_ a.4.6.2 (A:) Germination protein GerE {Bacillus subtilis [TaxId: 1423]}
Probab=10.66 E-value=36 Score=19.34 Aligned_cols=16 Identities=13% Similarity=0.206 Sum_probs=14.0
Q ss_pred CCcchhhhhhhcccCC
Q 046401 91 FTAEEGNILRGYCDAS 106 (127)
Q Consensus 91 FT~eE~diLrGyCd~~ 106 (127)
+|+.|.++|+.++++-
T Consensus 5 LT~rE~~vl~l~~~G~ 20 (67)
T d1fsea_ 5 LTKREREVFELLVQDK 20 (67)
T ss_dssp CCHHHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHHHccC
Confidence 7899999999998765
No 8
>d2hpqp_ g.14.1.1 (P:) Meizothrombin {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.32 E-value=60 Score=19.38 Aligned_cols=34 Identities=15% Similarity=0.356 Sum_probs=19.2
Q ss_pred cCcCC---------CCCc--hh----hHhhhcCCCcchhhhhhhcccCC
Q 046401 73 NSQAD---------TRNC--WP----AMLTSLGFTAEEGNILRGYCDAS 106 (127)
Q Consensus 73 nGet~---------~~~C--WP----~Ml~slGFT~eE~diLrGyCd~~ 106 (127)
||+.| +..| |- ......-....+.++-..||-.-
T Consensus 5 ~G~~YrG~~s~T~sG~~C~~W~~~~~~~~~~~~~~~~~~~l~~NyCRNP 53 (79)
T d2hpqp_ 5 RGQQYQGRLAVTTHGLPCLAWASAQAKALSKHQDFNSAVQLVENFCRNP 53 (79)
T ss_dssp GGTTCCCCCCBBTTSCBCCCTTCSSHHHHGGGSCCCTTSCCCTTCCBCS
T ss_pred CCCCCccCceECCCCCccCCCCCCCCcccccccccCcccccccccccCC
Confidence 57777 7788 83 22232233333444457899864
No 9
>d2al6a2 b.55.1.5 (A:254-363) Focal adhesion kinase 1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=10.31 E-value=31 Score=23.04 Aligned_cols=10 Identities=30% Similarity=1.079 Sum_probs=8.3
Q ss_pred hhhhhhcccC
Q 046401 96 GNILRGYCDA 105 (127)
Q Consensus 96 ~diLrGyCd~ 105 (127)
+|++.|||-=
T Consensus 88 AdLIdGYCrL 97 (110)
T d2al6a2 88 ADLIDGYCRL 97 (110)
T ss_dssp HHHHHHHHHH
T ss_pred HHHhhheEEE
Confidence 7899999953
No 10
>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}
Probab=9.45 E-value=51 Score=23.82 Aligned_cols=17 Identities=24% Similarity=0.491 Sum_probs=14.0
Q ss_pred hHhhhcCCCcchhhhhh
Q 046401 84 AMLTSLGFTAEEGNILR 100 (127)
Q Consensus 84 ~Ml~slGFT~eE~diLr 100 (127)
.+|..|||+.+|-+-|+
T Consensus 377 eIL~eLG~s~~eI~~L~ 393 (402)
T d1xk7a1 377 AILKNIGYSENDIQELV 393 (402)
T ss_dssp HHHHHTTCCHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHH
Confidence 67888999988877775
Done!