BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046404
(405 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449519018|ref|XP_004166532.1| PREDICTED: traB domain-containing protein-like [Cucumis sativus]
Length = 415
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 269/421 (63%), Positives = 322/421 (76%), Gaps = 22/421 (5%)
Query: 1 MNRLSRLVTPINSPKSRRFFTFITTVKSQIPLRRGPTSLPLSLTKQFSPLLSTRITSFAT 60
MNRL+R T +N +S RF I T + RR +L + FS I F+
Sbjct: 1 MNRLTRCATQLNLTESHRF---IVTATVKPHRRRLNYALTFKPHRHFSAPFDFGIF-FSQ 56
Query: 61 AND-----PNFPK-MDPNPPESG----EEFVHV-DP----LSESIVSLGDE-VRDESSDR 104
+D P P+ MDP PPES E+FVH+ DP L ESIVS DE + DE++
Sbjct: 57 NSDRPRRLPRLPQVMDPVPPESDSPAVEDFVHIEDPNIESLCESIVSTTDEQINDEAASV 116
Query: 105 DETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAI 164
+ E+ ++VLPEEL RSV++LTC++T EGG CDVYLVGTAHVS+ESCREV+A+
Sbjct: 117 ISPEAEEGLAEQ-RRVLPEELSRSVLVLTCETTGEGGICDVYLVGTAHVSQESCREVQAV 175
Query: 165 IDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHL 224
I +LKPQVVFLELC+SRV++LTPQNLKVPT+GEMV+MWKKKHN FGILYSWFLAKVA+ L
Sbjct: 176 ISYLKPQVVFLELCASRVAVLTPQNLKVPTMGEMVEMWKKKHNIFGILYSWFLAKVANKL 235
Query: 225 EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLP 284
E+FPGSEFRVA+EEAMKY GKVILGDRPVQIT+RR W KMPLWHKIKLLYSF+FQAFFLP
Sbjct: 236 EVFPGSEFRVAYEEAMKYRGKVILGDRPVQITIRRAWAKMPLWHKIKLLYSFVFQAFFLP 295
Query: 285 SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVA 344
S E+L +MLK+MDDVDMLTL+IQEMSK FPTLM+TLVHERD+YMS+TLL VA EH SVVA
Sbjct: 296 SPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHERDRYMSTTLLGVAKEHQSVVA 355
Query: 345 VVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYINCK 404
VVGKGHL GIK W+QPV + DL+ +P P+ V +K+ SS+GVAVAGVAIISG+Y+ CK
Sbjct: 356 VVGKGHLSGIKKNWQQPVTLEDLLEMP-PQKGVPVIKIFSSIGVAVAGVAIISGVYLACK 414
Query: 405 K 405
K
Sbjct: 415 K 415
>gi|449468335|ref|XP_004151877.1| PREDICTED: traB domain-containing protein-like [Cucumis sativus]
Length = 415
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 272/427 (63%), Positives = 324/427 (75%), Gaps = 34/427 (7%)
Query: 1 MNRLSRLVTPINSPKSRRFFTFITTVKSQIPLRRGPTSLPLSLTKQFSPLLSTRITSFAT 60
MNRL+R T +N +S RF I T + RR +L + FS I F+
Sbjct: 1 MNRLTRCATQLNLTESHRF---IVTATVKPHRRRLNYALTFKPHRHFSAPFDFGIF-FSQ 56
Query: 61 AND-----PNFPK-MDPNPPESG----EEFVHV-DP----LSESIVSLGDE-VRDESSDR 104
+D P P+ MDP PPES E+FVH+ DP L ESIVS DE + DE++
Sbjct: 57 NSDRPRRLPRLPQVMDPVPPESDSPAVEDFVHIEDPNIESLCESIVSTTDEQINDEAA-- 114
Query: 105 DETNGAVPVPE------ETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESC 158
+V PE E ++VLPEEL RSV++LTC++T EGG CDVYLVGTAHVS+ESC
Sbjct: 115 -----SVISPEAEEGLAEQRRVLPEELSRSVLVLTCETTGEGGICDVYLVGTAHVSQESC 169
Query: 159 REVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLA 218
REV+A+I +LKPQVVFLELC+SRV++LTPQNLKVPT+GEMV+MWKKKHN FGILYSWFLA
Sbjct: 170 REVQAVISYLKPQVVFLELCASRVAVLTPQNLKVPTMGEMVEMWKKKHNIFGILYSWFLA 229
Query: 219 KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLF 278
KVA+ LE+FPGSEFRVA+EEAMKY GKVILGDRPVQIT+RR W KMPLWHKIKLLYSF+F
Sbjct: 230 KVANKLEVFPGSEFRVAYEEAMKYRGKVILGDRPVQITIRRAWAKMPLWHKIKLLYSFVF 289
Query: 279 QAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE 338
QAFFLPS E+L +MLK+MDDVDMLTL+IQEMSK FPTLM+TLVHERD+YMS+TLL VA E
Sbjct: 290 QAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHERDRYMSTTLLGVAKE 349
Query: 339 HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISG 398
H SVVAVVGKGHL GIK W+QPV + DL+ +P+ K V +K+ SS+GVAVAGVAIISG
Sbjct: 350 HQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPTQK-GVPVVKIFSSIGVAVAGVAIISG 408
Query: 399 IYINCKK 405
+Y+ CKK
Sbjct: 409 VYLACKK 415
>gi|356544828|ref|XP_003540849.1| PREDICTED: traB domain-containing protein-like [Glycine max]
Length = 403
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/350 (72%), Positives = 292/350 (83%), Gaps = 17/350 (4%)
Query: 67 PKMDPNPPE------SGEEFVHV-----DPLSESIVSLGDEVRDESSDRDETNGAVPVPE 115
P MDP PPE S E+FVHV + LSES+V + DE S+ D A P +
Sbjct: 60 PTMDPQPPEPSAPAASAEDFVHVTDLKMESLSESMVRI-----DEPSEADAAPSA-PDSD 113
Query: 116 ETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFL 175
L EL R+V++L+C+S AEGG CDVYLVGTAHVS+ES REV+AI++FLKPQVVFL
Sbjct: 114 RRPATLSPELSRNVLVLSCESAAEGGVCDVYLVGTAHVSEESSREVQAIVNFLKPQVVFL 173
Query: 176 ELCSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVA 235
ELCSSRV++LT QNLKVPT+GEMV M KKKHN F +LY WFLAK+AS LE+FPGSEFRVA
Sbjct: 174 ELCSSRVAVLTLQNLKVPTMGEMVTMLKKKHNMFEVLYGWFLAKIASKLEVFPGSEFRVA 233
Query: 236 FEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKE 295
+EEA+KYGG+VILGDRPVQITLRRTW KMPLWHK KLLYS LFQA FLPS++DLN+MLKE
Sbjct: 234 YEEAIKYGGRVILGDRPVQITLRRTWSKMPLWHKTKLLYSLLFQAVFLPSSDDLNKMLKE 293
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
MDD DMLTLVIQEMSK FPTLMETLVHERDQYMSSTLLKVA+E+SSVVAVVGKGHLQGIK
Sbjct: 294 MDDSDMLTLVIQEMSKEFPTLMETLVHERDQYMSSTLLKVASENSSVVAVVGKGHLQGIK 353
Query: 356 NYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYINCKK 405
+WKQPV + DLMT+PSPKPAVSA ++++S+GVAVAGVAIISGIY++CKK
Sbjct: 354 KHWKQPVVMKDLMTVPSPKPAVSATRIVTSIGVAVAGVAIISGIYLSCKK 403
>gi|224132632|ref|XP_002327843.1| predicted protein [Populus trichocarpa]
gi|222837252|gb|EEE75631.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 249/350 (71%), Positives = 290/350 (82%), Gaps = 17/350 (4%)
Query: 63 DPNFPKMDPNPPESGEEFVHVDP-------LSESIVSLGDEVRDESSDRDETNGAVPVPE 115
DPN MDPNP S EEFVH++ LSESIV + +E+ ++ + D+
Sbjct: 4 DPNPSTMDPNP--SNEEFVHIENPSDNDNHLSESIVDVANELSEDDNKNDDVV------- 54
Query: 116 ETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFL 175
+K LPEEL RSV++LTC+S AEGGTC V+LVGTAHV +ESCREV+A+I +LKPQVVFL
Sbjct: 55 -ERKELPEELSRSVMVLTCESKAEGGTCVVHLVGTAHVCQESCREVQAVISYLKPQVVFL 113
Query: 176 ELCSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVA 235
ELC+SRV+ML+PQNLKVPT+GEM+ MWKK HNTFGILYSWFLAKVA LE+FPGSEFRVA
Sbjct: 114 ELCASRVAMLSPQNLKVPTMGEMIKMWKKNHNTFGILYSWFLAKVADKLEVFPGSEFRVA 173
Query: 236 FEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKE 295
FEEA KY GKV+LGDRPVQITLRRTW KMP+WHK+K LYS LFQA FLPS+EDL +MLKE
Sbjct: 174 FEEARKYEGKVVLGDRPVQITLRRTWGKMPVWHKVKFLYSLLFQALFLPSSEDLEKMLKE 233
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
MDDVDMLTLVIQEMSK FPTLMETLV ERDQYMSSTLL++A EH+SVVAVVGKGHLQGIK
Sbjct: 234 MDDVDMLTLVIQEMSKQFPTLMETLVQERDQYMSSTLLRIAKEHNSVVAVVGKGHLQGIK 293
Query: 356 NYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYINCKK 405
+W+Q + + DLM +PS K AVSA KVL+SLGVAVAGVAI+SGIY++ KK
Sbjct: 294 RHWEQHIELKDLMELPSQKSAVSAWKVLASLGVAVAGVAIVSGIYLSRKK 343
>gi|225447334|ref|XP_002280408.1| PREDICTED: traB domain-containing protein isoform 1 [Vitis
vinifera]
gi|297739309|emb|CBI28960.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 245/359 (68%), Positives = 289/359 (80%), Gaps = 16/359 (4%)
Query: 48 SPLLSTRITSFATANDPNF-PKMDPNPPESGEEFVHVDPLSESIVSLGDEVRDESSDRDE 106
SP L+T F ++P+ P +PN S E+FV VD + SL E E SDR+
Sbjct: 90 SPGLNTASEDFVHVDNPDLDPIPNPNIETSPEDFVSVDDRQHDVASLNAEA--EGSDRN- 146
Query: 107 TNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIID 166
+VLPEEL RSVV+L+C+S+AEGGTCDVYLVGTAHVS+ESCREV+A+I
Sbjct: 147 ------------RVLPEELSRSVVMLSCESSAEGGTCDVYLVGTAHVSQESCREVQAVIS 194
Query: 167 FLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEI 226
+LKP+ VFLELCSSRV++LTPQ+LKVPT+ EM+DMWKK HN GILYSWFLAKVA+ LE+
Sbjct: 195 YLKPEAVFLELCSSRVAVLTPQSLKVPTMSEMIDMWKKNHNLLGILYSWFLAKVANRLEV 254
Query: 227 FPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSA 286
FPG+EFRVA+EEAMKYGGKV+LGDRP+ ITLRRTW KMPLWHK KLLY+ FQAFFLPS
Sbjct: 255 FPGAEFRVAYEEAMKYGGKVMLGDRPINITLRRTWGKMPLWHKAKLLYTITFQAFFLPSQ 314
Query: 287 EDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVV 346
EDLN+M+KEMD+VDMLTLVIQEMSK FPTLMETLVHERDQ+MSSTLL+VA +HSSVVAVV
Sbjct: 315 EDLNKMMKEMDNVDMLTLVIQEMSKEFPTLMETLVHERDQFMSSTLLRVAAKHSSVVAVV 374
Query: 347 GKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYINCKK 405
GKGHLQGIK W+QP+ + L+ PS PAVSA+K+L+SLG AVAGVAIISGIY+ KK
Sbjct: 375 GKGHLQGIKKNWQQPIQITSLLEPPSHSPAVSAVKILTSLGAAVAGVAIISGIYLAVKK 433
>gi|356515256|ref|XP_003526317.1| PREDICTED: traB domain-containing protein-like [Glycine max]
Length = 344
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/348 (69%), Positives = 284/348 (81%), Gaps = 15/348 (4%)
Query: 69 MDPNPPESG------EEFVHV-----DPLSESIVSLGDEVRDESSDRDETNGAVPVPEET 117
MD PPES E+FVHV + LSESIV + + +++ + P
Sbjct: 1 MDAQPPESAAPAASTEDFVHVADLKMESLSESIVRIDEPSEADAAASSAPAESDRRP--- 57
Query: 118 KKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLEL 177
LP EL R+V +L+C+S+AEGG CDVYLVGTAHVS+ES REV+AI++FLKPQVVFLEL
Sbjct: 58 -ATLPPELSRNVRVLSCESSAEGGVCDVYLVGTAHVSEESSREVQAIVNFLKPQVVFLEL 116
Query: 178 CSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFE 237
CSSRV++LT QNLKVPT+GEMV M KKKHN F +LY WFLAK+AS LE+FPGSEFRVA+E
Sbjct: 117 CSSRVAVLTLQNLKVPTMGEMVTMLKKKHNMFEVLYGWFLAKIASKLEVFPGSEFRVAYE 176
Query: 238 EAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMD 297
EA+KYGG+VILGDRPVQITLRRTW KMPLWHK K LYS LFQA FL +A+DLN+ML EMD
Sbjct: 177 EAIKYGGRVILGDRPVQITLRRTWSKMPLWHKTKFLYSLLFQAVFLSNADDLNKMLNEMD 236
Query: 298 DVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNY 357
D DMLTLVIQEMSK FPTLMETLVHERDQYMSSTLLKVA+E+SSVVAVVGKGHLQGIK +
Sbjct: 237 DSDMLTLVIQEMSKEFPTLMETLVHERDQYMSSTLLKVASENSSVVAVVGKGHLQGIKKH 296
Query: 358 WKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYINCKK 405
WKQPV + DLMT+PSPKP VSA ++++S+G AVAGV+IISGIY++CKK
Sbjct: 297 WKQPVVMKDLMTVPSPKPVVSATRIVTSVGAAVAGVSIISGIYLSCKK 344
>gi|224095744|ref|XP_002310462.1| predicted protein [Populus trichocarpa]
gi|222853365|gb|EEE90912.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/288 (79%), Positives = 262/288 (90%)
Query: 118 KKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLEL 177
+K LPEEL RSV++LTC+S AEGGTC V+LVGTAHVS+ESCREV+A++ +LKPQVVFLEL
Sbjct: 3 RKELPEELSRSVMVLTCESKAEGGTCVVHLVGTAHVSQESCREVQAVVSYLKPQVVFLEL 62
Query: 178 CSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFE 237
C+SRV++LTPQNLKVPT+GEM++MWKK HN FGILYSWFLAKV+ LE+FPGSEFRVAFE
Sbjct: 63 CASRVAVLTPQNLKVPTMGEMIEMWKKNHNAFGILYSWFLAKVSDKLEVFPGSEFRVAFE 122
Query: 238 EAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMD 297
EA KY GKV+LGDRPVQITL+RTW KMPLWHK+KLLYS LFQA FLPS+EDL++MLKEMD
Sbjct: 123 EARKYEGKVVLGDRPVQITLQRTWGKMPLWHKVKLLYSLLFQALFLPSSEDLDKMLKEMD 182
Query: 298 DVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNY 357
DVDMLTLVIQEMSK FPTLM+TLVHERDQYMSSTLL++A EH+SVVAVVGKGHLQGIK +
Sbjct: 183 DVDMLTLVIQEMSKQFPTLMDTLVHERDQYMSSTLLRIAKEHTSVVAVVGKGHLQGIKKH 242
Query: 358 WKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYINCKK 405
W QP + DLM IPS KPAVSA KVL+SLGVAVAGVAI+SG Y++ KK
Sbjct: 243 WGQPFEMKDLMEIPSQKPAVSARKVLASLGVAVAGVAIVSGFYLSRKK 290
>gi|255549373|ref|XP_002515740.1| conserved hypothetical protein [Ricinus communis]
gi|223545177|gb|EEF46687.1| conserved hypothetical protein [Ricinus communis]
Length = 368
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 250/423 (59%), Positives = 292/423 (69%), Gaps = 73/423 (17%)
Query: 1 MNRLSRLVTPINSPKSRRFFTFITTVKSQIPLRRGPTSLPLSLTKQFSPLLSTRITSFAT 60
MNR +RL++ + SP S RFFTF G +L + Q SP +I SFAT
Sbjct: 1 MNRSTRLLSQVYSPDSHRFFTF-----------GGHKTLAFTPRVQISPPKFRKIISFAT 49
Query: 61 AN---DPNFPKMDPNPPES-------GEEFVHVD--------PLSESIVSLGDEVRDESS 102
+ N P MDPN PES E+F+HV+ LSESIV + +E+R+E++
Sbjct: 50 KTGNLNTNIPAMDPNRPESSEPHGSANEDFIHVENPNLYVEEALSESIVDVDNELREENA 109
Query: 103 DRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVE 162
+ G+ PE +K LPEEL RSVV LTC+S AEGG CDVYLVGTAHVS+ESC EV
Sbjct: 110 N----TGSDSEPE--RKELPEELSRSVVKLTCESAAEGGLCDVYLVGTAHVSQESCEEVR 163
Query: 163 AIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVAS 222
AII +LKP+VVFLELC+ R+++LTPQNLKVPT+GEM++MWKK N FGILYSWFLAKVA
Sbjct: 164 AIIRYLKPEVVFLELCTRRLAVLTPQNLKVPTMGEMIEMWKKNQNMFGILYSWFLAKVAD 223
Query: 223 HLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFF 282
LE+FPGSEFRV FEEA YGGKVILGDRPVQ
Sbjct: 224 KLEVFPGSEFRVGFEEARAYGGKVILGDRPVQ---------------------------- 255
Query: 283 LPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSV 342
LKEMD+VDMLTLVIQEMSK FPTLMETLVHERDQYMSSTLLKVA+EH+SV
Sbjct: 256 ----------LKEMDNVDMLTLVIQEMSKEFPTLMETLVHERDQYMSSTLLKVASEHTSV 305
Query: 343 VAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYIN 402
VAVVGKGHLQGIK +W+QPVPV DL+ +PS KPA+SALKVL+SLGVAV+GVAII GIY
Sbjct: 306 VAVVGKGHLQGIKRHWRQPVPVKDLLEMPSQKPAISALKVLTSLGVAVSGVAIIWGIYRA 365
Query: 403 CKK 405
CKK
Sbjct: 366 CKK 368
>gi|30679206|ref|NP_172019.3| TraB-like protein [Arabidopsis thaliana]
gi|26450987|dbj|BAC42600.1| unknown protein [Arabidopsis thaliana]
gi|28950927|gb|AAO63387.1| At1g05270 [Arabidopsis thaliana]
gi|51969614|dbj|BAD43499.1| unknown protein [Arabidopsis thaliana]
gi|332189695|gb|AEE27816.1| TraB-like protein [Arabidopsis thaliana]
Length = 371
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/355 (62%), Positives = 281/355 (79%), Gaps = 25/355 (7%)
Query: 76 SGEEFVHVD--------PLSESIVSLGDEVRDESSDRDETNGAVPV-------------- 113
SGE+FVH+D LS+SIV++ + + + +E G+ V
Sbjct: 17 SGEDFVHIDDPRPTGDISLSDSIVNVEKDELLDEAAEEEFRGSDSVFSGGDGGGADDDGG 76
Query: 114 ---PEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKP 170
E TK LPEEL +SVVILTC+STA+GG+CDVYLVGTAHVSK+SC EVEAII LKP
Sbjct: 77 ECSSEATKVELPEELAKSVVILTCESTADGGSCDVYLVGTAHVSKQSCLEVEAIISILKP 136
Query: 171 QVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGS 230
+VVF+ELCSSR+S+L PQ LK+PT+ +M++ WK+K NTFGILY WFLAK+ASHLE+FPG+
Sbjct: 137 EVVFVELCSSRLSVLKPQTLKIPTMSDMIESWKQKQNTFGILYGWFLAKIASHLEVFPGA 196
Query: 231 EFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN 290
EFRVA+EEA+KYGGKVILGDRPVQITL+RTW KMPLWHK+K LYS LFQA FLP AE+L
Sbjct: 197 EFRVAYEEAIKYGGKVILGDRPVQITLKRTWAKMPLWHKVKFLYSILFQAVFLPGAEELE 256
Query: 291 RMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGH 350
+MLK+MD+VDM+TLVIQEMSK FPTLM+T+VHERDQYM+S+LL+VA++HSSVVAV+GKGH
Sbjct: 257 KMLKDMDNVDMVTLVIQEMSKEFPTLMDTIVHERDQYMASSLLRVASDHSSVVAVIGKGH 316
Query: 351 LQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYINCKK 405
+ GIK WKQP+ ++DLM IPS K + +++SS+ VAVAG AI+SGI ++ +K
Sbjct: 317 INGIKKNWKQPITMNDLMEIPSDKSVFTLKRIISSVAVAVAGTAIVSGILLSRRK 371
>gi|297848792|ref|XP_002892277.1| TraB family protein [Arabidopsis lyrata subsp. lyrata]
gi|297338119|gb|EFH68536.1| TraB family protein [Arabidopsis lyrata subsp. lyrata]
Length = 372
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/364 (61%), Positives = 281/364 (77%), Gaps = 26/364 (7%)
Query: 67 PKMDPNPPESGEEFVHVD--------PLSESIVSL----------------GDEVRDESS 102
P +P+ SGE+FVH+D LS+SIV++ D V
Sbjct: 10 PSSEPDV-HSGEDFVHIDDPRPTGDISLSDSIVNVDKDELLDEAAEEEFRGSDSVFSGGD 68
Query: 103 DRDETNGAVPVPEETKKV-LPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
+ ET KV LPE+L +SVVILTC+STA+GG+CDVYLVGTAHVSK+SC EV
Sbjct: 69 GGGADDDGGECSSETIKVELPEDLAKSVVILTCESTADGGSCDVYLVGTAHVSKQSCLEV 128
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVA 221
EAII LKP+VVF+ELCSSR+S+L PQ LK+PT+ +M++ WK+K NTFGILY WFLAK+A
Sbjct: 129 EAIISILKPEVVFVELCSSRLSVLKPQTLKIPTMSDMIESWKQKQNTFGILYGWFLAKIA 188
Query: 222 SHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAF 281
SHLE+FPG+EFRVA+EEA+KYGGKVILGDRPVQITL+RTW KMPLWHK+K LYS LFQA
Sbjct: 189 SHLEVFPGAEFRVAYEEAIKYGGKVILGDRPVQITLKRTWAKMPLWHKVKFLYSILFQAV 248
Query: 282 FLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSS 341
FLPSAE+L +MLK+MD+VDM+TLVIQEMSK FPTLM+T+VHERDQYM+S+LL+VA+EHSS
Sbjct: 249 FLPSAEELEKMLKDMDNVDMVTLVIQEMSKEFPTLMDTIVHERDQYMASSLLRVASEHSS 308
Query: 342 VVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYI 401
VVAV+GKGH+ GIK WKQP+ ++DLM IPS K + +++SS+ +AVAG AI+SGI +
Sbjct: 309 VVAVIGKGHINGIKKNWKQPITMNDLMEIPSDKSVFTIKRIISSVAIAVAGTAIVSGILL 368
Query: 402 NCKK 405
++
Sbjct: 369 ARRR 372
>gi|357128835|ref|XP_003566075.1| PREDICTED: traB domain-containing protein-like [Brachypodium
distachyon]
Length = 395
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/353 (61%), Positives = 265/353 (75%), Gaps = 25/353 (7%)
Query: 69 MDPNPPESGEE---------FVHVDPLSESIVSLGDEVRDESSDRDETNGAVPVPEETKK 119
MDP PP +G + +VD + +G E ++ R G P P+E
Sbjct: 52 MDPAPPSAGADADAETNGDAVAYVDAAEFADAGVGGE---DAEPRVTAGGYEP-PKE--- 104
Query: 120 VLPEELPRSVVILTCDSTA------EGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVV 173
LPEEL + VV L C ++A E GTC VY+VGTAHVS+ESC +V+A+I++LKPQ V
Sbjct: 105 -LPEELAKGVVCLECATSAQAVEAGERGTCRVYVVGTAHVSQESCDQVKAVINYLKPQAV 163
Query: 174 FLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKH-NTFGILYSWFLAKVASHLEIFPGSEF 232
FLELCSSRVS+LTPQNL+VPT+ EM+DMWKKK NTFGILYSWFLA+VAS L++ PG+EF
Sbjct: 164 FLELCSSRVSILTPQNLQVPTMNEMLDMWKKKKMNTFGILYSWFLAQVASQLDVLPGAEF 223
Query: 233 RVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM 292
RVAFEEAM YGGKVILGDRPVQITLRRTW KM LWH+ K LY + Q+ FLPS+EDLN+M
Sbjct: 224 RVAFEEAMNYGGKVILGDRPVQITLRRTWGKMSLWHRTKFLYYIVSQSLFLPSSEDLNKM 283
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
LK+MDDVDMLTLVIQEMSKAFP+LMETL+HERD YMSS LLKVA EHSSVVAVVGKGH+
Sbjct: 284 LKDMDDVDMLTLVIQEMSKAFPSLMETLLHERDMYMSSKLLKVAREHSSVVAVVGKGHVS 343
Query: 353 GIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYINCKK 405
GIK W+QP+ V L+ +P K S +K+L+S+GV ++GV I +G+YI KK
Sbjct: 344 GIKKNWQQPIEVQTLLELPVVKQGASKMKILASVGV-LSGVVIATGVYIWGKK 395
>gi|218197042|gb|EEC79469.1| hypothetical protein OsI_20492 [Oryza sativa Indica Group]
gi|222632118|gb|EEE64250.1| hypothetical protein OsJ_19083 [Oryza sativa Japonica Group]
Length = 332
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/294 (68%), Positives = 243/294 (82%), Gaps = 8/294 (2%)
Query: 119 KVLPEELPRSVVILTCDSTAE------GGTCDVYLVGTAHVSKESCREVEAIIDFLKPQV 172
K LPEEL + VV L C+++ E GGTC VY+VGTAHVS+ESC +V+A+ID+LKPQ
Sbjct: 40 KELPEELAKGVVCLECETSPEAEAAGAGGTCRVYVVGTAHVSQESCDQVKAVIDYLKPQA 99
Query: 173 VFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKH-NTFGILYSWFLAKVASHLEIFPGSE 231
VFLELC+SRV++LTPQNL+VPT+ EM+DMWKKK NTFGILYSWFLAKVAS L++ PG+E
Sbjct: 100 VFLELCASRVAILTPQNLQVPTMNEMIDMWKKKKMNTFGILYSWFLAKVASQLDVLPGAE 159
Query: 232 FRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR 291
FRVAFEEAM YGGKVILGDRPVQITLRRTW +M LWH+ K LY +FQ+ FLPS E+LN+
Sbjct: 160 FRVAFEEAMSYGGKVILGDRPVQITLRRTWGRMSLWHRAKFLYYIVFQSIFLPSPEELNK 219
Query: 292 MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHL 351
MLK+M+DVDMLTLVIQEMSKAFPTLMETL+HERD YMSS LLKVA EHSSVVAVVGKGH+
Sbjct: 220 MLKDMEDVDMLTLVIQEMSKAFPTLMETLLHERDMYMSSKLLKVAKEHSSVVAVVGKGHV 279
Query: 352 QGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYINCKK 405
GIK W+QP+ + L+ +P K S +K+L+S+G A+ GV I +GIYI +K
Sbjct: 280 SGIKKNWEQPIEIESLLVLPVTKQGASKMKILASIG-ALGGVVIATGIYIWSRK 332
>gi|215769230|dbj|BAH01459.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/294 (68%), Positives = 243/294 (82%), Gaps = 8/294 (2%)
Query: 119 KVLPEELPRSVVILTCDSTAE------GGTCDVYLVGTAHVSKESCREVEAIIDFLKPQV 172
K LPEEL + VV L C+++ E GGTC VY+VGTAHVS+ESC +V+A+ID+LKPQ
Sbjct: 101 KELPEELAKGVVCLECETSPEAEAAGAGGTCRVYVVGTAHVSQESCDQVKAVIDYLKPQA 160
Query: 173 VFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKH-NTFGILYSWFLAKVASHLEIFPGSE 231
VFLELC+SRV++LTPQNL+VPT+ EM+DMWKKK NTFGILYSWFLAKVAS L++ PG+E
Sbjct: 161 VFLELCASRVAILTPQNLQVPTMNEMIDMWKKKKMNTFGILYSWFLAKVASQLDVLPGAE 220
Query: 232 FRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR 291
FRVAFEEAM YGGKVILGDRPVQITLRRTW +M LWH+ K LY +FQ+ FLPS E+LN+
Sbjct: 221 FRVAFEEAMSYGGKVILGDRPVQITLRRTWGRMSLWHRAKFLYYIVFQSIFLPSPEELNK 280
Query: 292 MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHL 351
MLK+M+DVDMLTLVIQEMSKAFPTLMETL+HERD YMSS LLKVA EHSSVVAVVGKGH+
Sbjct: 281 MLKDMEDVDMLTLVIQEMSKAFPTLMETLLHERDMYMSSKLLKVAKEHSSVVAVVGKGHV 340
Query: 352 QGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYINCKK 405
GIK W+QP+ + L+ +P K S +K+L+S+G A+ GV I +GIYI +K
Sbjct: 341 SGIKKNWEQPIEIESLLVLPVTKQGASKMKILASIG-ALGGVVIATGIYIWSRK 393
>gi|326494424|dbj|BAJ90481.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510317|dbj|BAJ87375.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 390
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/384 (59%), Positives = 272/384 (70%), Gaps = 20/384 (5%)
Query: 30 IPLRRGPTSLPLSLTKQFSPLLSTRITSFATAN-DPNFPKMDPNPPESGEEFVHVDPLSE 88
+P + P + PL + +P+L SFA+ P MDP P S + V+ + E
Sbjct: 19 LPTPQQPRARPLPARRAPAPILR----SFASRRLAPLCLLMDPATPASDAD-VYAEANGE 73
Query: 89 SIVSLGDEVRDESSDRDETNGAVPVPEETKKVLPEELPRSVVILTCDST------AEGGT 142
+ E D + + P E LPEEL R VV L C ++ EG T
Sbjct: 74 AGAD-DSEFADAQAGAGGEDAGADGPRE----LPEELARGVVCLECYTSPEAVAAGEGET 128
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
C VY+VGTAHVS+ESC +V+A+I+FLKPQ VFLELCSSRV++LTPQNL+VPT+ EM+DMW
Sbjct: 129 CRVYVVGTAHVSQESCDQVKAVINFLKPQAVFLELCSSRVTILTPQNLQVPTMNEMIDMW 188
Query: 203 KKKH-NTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTW 261
KKK NTFGILYSWFLAKVAS L++ PG+EFRVAFEEAM YGGKVILGDRPVQITLRRTW
Sbjct: 189 KKKKMNTFGILYSWFLAKVASQLDVLPGAEFRVAFEEAMTYGGKVILGDRPVQITLRRTW 248
Query: 262 EKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLV 321
KM LWH+ K LY +FQ+ FLPS EDLN+MLK+MDDVDMLTLVIQEMSKAFP+LMETL+
Sbjct: 249 GKMSLWHRAKFLYYIVFQSLFLPSPEDLNKMLKDMDDVDMLTLVIQEMSKAFPSLMETLL 308
Query: 322 HERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALK 381
HERD YMSS LLKVA EHSSVVAVVGKGH+ GIK W+QP+ V LM +P + S LK
Sbjct: 309 HERDMYMSSKLLKVAREHSSVVAVVGKGHVSGIKKNWQQPIEVQSLMELPVTRKGPSKLK 368
Query: 382 VLSSLGVAVAGVAIISGIYINCKK 405
+L+S+G A VA SGIYI KK
Sbjct: 369 ILASIGAVSAVVA--SGIYIWGKK 390
>gi|413945910|gb|AFW78559.1| traB protein [Zea mays]
Length = 422
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/294 (69%), Positives = 243/294 (82%), Gaps = 8/294 (2%)
Query: 119 KVLPEELPRSVVILTCDSTAE------GGTCDVYLVGTAHVSKESCREVEAIIDFLKPQV 172
K LPEEL + VV L C+++AE GGTC VY+VGTAHVS+ESC +V+AII++LKPQ
Sbjct: 130 KELPEELAKGVVCLECETSAEAAVSGVGGTCRVYVVGTAHVSQESCDQVKAIINYLKPQA 189
Query: 173 VFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK-KHNTFGILYSWFLAKVASHLEIFPGSE 231
VFLELC SRV++LTPQNL+VPT+ EM+DMWKK K NTFGI+YSWFLAKVAS LE+ PG+E
Sbjct: 190 VFLELCMSRVAILTPQNLQVPTMNEMIDMWKKNKMNTFGIIYSWFLAKVASQLEVLPGAE 249
Query: 232 FRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR 291
FRVAFEEAM YGGKVILGDRPVQITLRRTW KM LWH+ K LY +FQ+ FLPS E+LN+
Sbjct: 250 FRVAFEEAMSYGGKVILGDRPVQITLRRTWGKMSLWHRAKFLYYIIFQSVFLPSPEELNK 309
Query: 292 MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHL 351
MLK+MDDVDMLTLVIQEMSKAFP+LM+TL+HERD YMSSTLLK A E+SSVVAVVGKGH+
Sbjct: 310 MLKDMDDVDMLTLVIQEMSKAFPSLMDTLLHERDMYMSSTLLKSAREYSSVVAVVGKGHV 369
Query: 352 QGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYINCKK 405
GIK W+QP+ V+ L+ +P S LK+L+S+G A+ GV I SGIY+ +K
Sbjct: 370 SGIKKNWQQPIQVNCLLELPDANQGPSKLKILASIG-ALTGVIIASGIYVWGRK 422
>gi|242090999|ref|XP_002441332.1| hypothetical protein SORBIDRAFT_09g024600 [Sorghum bicolor]
gi|241946617|gb|EES19762.1| hypothetical protein SORBIDRAFT_09g024600 [Sorghum bicolor]
Length = 425
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/294 (68%), Positives = 241/294 (81%), Gaps = 8/294 (2%)
Query: 119 KVLPEELPRSVVILTCDSTAEGG------TCDVYLVGTAHVSKESCREVEAIIDFLKPQV 172
K LPEEL + VV L C+++AE TC VY+VGTAHVS+ESC +V+AI+++LKPQ
Sbjct: 133 KELPEELAKGVVCLECETSAEAAAAGVGGTCRVYVVGTAHVSQESCDQVKAIVNYLKPQA 192
Query: 173 VFLELCSSRVSMLTPQNLKVPTVGEMVDMWK-KKHNTFGILYSWFLAKVASHLEIFPGSE 231
VFLELC+SR+++LTPQNL+VPT+ EM+DMWK KK NTFGILYSWFLAKVAS LE+ PG+E
Sbjct: 193 VFLELCTSRIAILTPQNLQVPTMNEMIDMWKNKKMNTFGILYSWFLAKVASQLEVLPGAE 252
Query: 232 FRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR 291
FRVAFEEAM YGGKVILGDRPVQITLRRTW KM LWH+ K LY +FQ+ FLPS E+LN+
Sbjct: 253 FRVAFEEAMSYGGKVILGDRPVQITLRRTWGKMSLWHRAKFLYYIIFQSIFLPSPEELNK 312
Query: 292 MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHL 351
MLK+MDDVDMLTLVIQEMSKAFP+LM+TL+HERD YMSS LLK A E+SSVVAVVGKGH+
Sbjct: 313 MLKDMDDVDMLTLVIQEMSKAFPSLMDTLLHERDMYMSSMLLKSAREYSSVVAVVGKGHV 372
Query: 352 QGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYINCKK 405
GIK W+QP+ V L+ +P S LK+L+S+G A++GV I SGIYI +K
Sbjct: 373 AGIKKNWQQPIQVKCLLELPDANQGPSKLKILASIG-ALSGVIIASGIYIWGRK 425
>gi|326525911|dbj|BAJ93132.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 366
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/350 (60%), Positives = 252/350 (72%), Gaps = 18/350 (5%)
Query: 30 IPLRRGPTSLPLSLTKQFSPLLSTRITSFATAN-DPNFPKMDPNPPESGEEFVHVDPLSE 88
+P + P + PL + +P+L SFA+ P MDP P S + V+ + E
Sbjct: 19 LPTPQQPRARPLPARRAPAPILR----SFASRRLAPLCLLMDPATPASDAD-VYAEANGE 73
Query: 89 SIVSLGDEVRDESSDRDETNGAVPVPEETKKVLPEELPRSVVILTCDST------AEGGT 142
+ E D + + P E LPEEL R VV L C ++ EG T
Sbjct: 74 AGAD-DSEFADAQAGAGGEDAGADGPRE----LPEELARGVVCLECYTSPEAVAAGEGET 128
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
C VY+VGTAHVS+ESC +V+A+I+FLKPQ VFLELCSSRV++LTPQNL+VPT+ EM+DMW
Sbjct: 129 CRVYVVGTAHVSQESCDQVKAVINFLKPQAVFLELCSSRVTILTPQNLQVPTMNEMIDMW 188
Query: 203 KKKH-NTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTW 261
KKK NTFGILYSWFLAKVAS L++ PG+EFRVAFEEAM YGGKVILGDRPVQITLRRTW
Sbjct: 189 KKKKMNTFGILYSWFLAKVASQLDVLPGAEFRVAFEEAMTYGGKVILGDRPVQITLRRTW 248
Query: 262 EKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLV 321
KM LWH+ K LY +FQ+ FLPS EDLN+MLK+MDDVDMLTLVIQEMSKAFP+LMETL+
Sbjct: 249 GKMSLWHRAKFLYYIVFQSLFLPSPEDLNKMLKDMDDVDMLTLVIQEMSKAFPSLMETLL 308
Query: 322 HERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
HERD YMSS LLKVA EHSSVVAVVGKGH+ GIK W+QP+ V LM +P
Sbjct: 309 HERDMYMSSKLLKVAREHSSVVAVVGKGHVSGIKKNWQQPIEVQSLMELP 358
>gi|148909837|gb|ABR18005.1| unknown [Picea sitchensis]
Length = 430
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/309 (63%), Positives = 241/309 (77%), Gaps = 8/309 (2%)
Query: 100 ESSDRD--ETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKES 157
ESS RD E + P+ ++ LPEE + +V+L C+S G C+VYLVGTAHVS ES
Sbjct: 127 ESSARDQPEDDFHETGPDSEERGLPEEYSKGLVVLQCESRTPSGICNVYLVGTAHVSLES 186
Query: 158 CREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKH-NTFGILYSWF 216
CREV+A+I FLKPQVVFLELC SRV+ML PQNL+VP++ EM+DMWK +H N FG+LYSWF
Sbjct: 187 CREVQAVIHFLKPQVVFLELCPSRVAMLVPQNLEVPSIREMIDMWKNRHINAFGVLYSWF 246
Query: 217 LAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSF 276
LAKVA+ LE+FPGSEFR+A+EEAM YG KVILGDRPVQITLRRTW KM LWHK K L+
Sbjct: 247 LAKVAAKLEVFPGSEFRIAYEEAMSYGAKVILGDRPVQITLRRTWAKMSLWHKTKFLFCM 306
Query: 277 LFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA 336
FQA +LPS E+LN+M M DVD+LTLVIQEMSK FP+L+ETLV+ERD YMSSTLLKVA
Sbjct: 307 FFQAIWLPSPEELNKM---MGDVDVLTLVIQEMSKTFPSLIETLVNERDLYMSSTLLKVA 363
Query: 337 TEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAII 396
EH SVVAVVG+GHL GI+ W +PV V+ L+ +P K S++K+ +++ +AV VAI
Sbjct: 364 KEHDSVVAVVGRGHLSGIEKNWMKPVSVNSLLEVPVAKS--SSMKLWTAVALAVGSVAIF 421
Query: 397 SGIYINCKK 405
+G+Y+ KK
Sbjct: 422 TGLYLTRKK 430
>gi|238836902|gb|ACR61551.1| TraB [Zea mays]
Length = 320
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/254 (73%), Positives = 218/254 (85%), Gaps = 7/254 (2%)
Query: 119 KVLPEELPRSVVILTCDSTAE------GGTCDVYLVGTAHVSKESCREVEAIIDFLKPQV 172
K LPEEL + VV L C+++AE GGTC VY+VGTAHVS+ESC +V+AII++LKPQ
Sbjct: 65 KELPEELAKGVVCLECETSAEAAVSGVGGTCRVYVVGTAHVSQESCDQVKAIINYLKPQA 124
Query: 173 VFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK-KHNTFGILYSWFLAKVASHLEIFPGSE 231
VFLELC SRV++LTPQNL+VPT+ EM+DMWKK K NTFGI+YSWFLAKVAS LE+ PG+E
Sbjct: 125 VFLELCMSRVAILTPQNLQVPTMNEMIDMWKKNKMNTFGIIYSWFLAKVASQLEVLPGAE 184
Query: 232 FRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR 291
FRVAFEEAM YGGKVILGDRPVQITLRRTW KM LWH+ K LY +FQ+ FLPS E+LN+
Sbjct: 185 FRVAFEEAMSYGGKVILGDRPVQITLRRTWGKMSLWHRAKFLYYIIFQSVFLPSPEELNK 244
Query: 292 MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHL 351
MLK+MDDVDMLTLVIQEMSKAFP+LM+TL+HERD YMSSTLLK A E+SSVVAVVGKGH+
Sbjct: 245 MLKDMDDVDMLTLVIQEMSKAFPSLMDTLLHERDMYMSSTLLKSAREYSSVVAVVGKGHV 304
Query: 352 QGIKNYWKQPVPVH 365
GIK W+QP+ V+
Sbjct: 305 SGIKKNWQQPIQVN 318
>gi|240254566|ref|NP_180793.5| TraB family protein [Arabidopsis thaliana]
gi|330253577|gb|AEC08671.1| TraB family protein [Arabidopsis thaliana]
Length = 360
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/342 (58%), Positives = 245/342 (71%), Gaps = 8/342 (2%)
Query: 65 NFPKMDPNPPESGEEFVHVDPLSESIVSLGDEVRDESSDRDETNGAVPVPEETKKVLPEE 124
N K D E+ + V SI GD +D E V V K LPEE
Sbjct: 20 NVDKEDLRREEADSDAGSVIICDHSICDSGDGDICAVADYVE---CVAVETTEKLELPEE 76
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
+SV++LTC+STAEGG+CDVYLVGTAHVS+ESCREVEA+I LKPQ VFLELCSSR+S+
Sbjct: 77 FAKSVMVLTCESTAEGGSCDVYLVGTAHVSQESCREVEAVISALKPQAVFLELCSSRLSI 136
Query: 185 LTPQNLKV-----PTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEA 239
LTPQ +KV PT EM+ MWKKKHN F I+Y + LAK A LE+FPG+EFRV FEEA
Sbjct: 137 LTPQTVKVCCQEPPTWMEMIYMWKKKHNLFEIVYGYILAKAAKKLEVFPGAEFRVGFEEA 196
Query: 240 MKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDV 299
KYGG+V LGDR VQITL+RTW KMPLWHKIKL+YS + QA FLP+ ++L +MLK++ D
Sbjct: 197 NKYGGRVFLGDRSVQITLQRTWGKMPLWHKIKLVYSIVSQAVFLPNPKELEKMLKDLGDG 256
Query: 300 DMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK 359
DMLTL IQEMS FPTLMETLVHERD+YM+ LL++A+EHSSVVAVVG+GHLQGIK W
Sbjct: 257 DMLTLAIQEMSTEFPTLMETLVHERDKYMAYQLLRIASEHSSVVAVVGRGHLQGIKKNWN 316
Query: 360 QPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYI 401
Q + + +LM +P+ + + +L + V V G AI+SG+Y+
Sbjct: 317 QTINIKELMELPTNESIFTVKNILKYMVVVVVGTAIVSGMYL 358
>gi|224095746|ref|XP_002310463.1| predicted protein [Populus trichocarpa]
gi|222853366|gb|EEE90913.1| predicted protein [Populus trichocarpa]
Length = 371
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/405 (50%), Positives = 263/405 (64%), Gaps = 42/405 (10%)
Query: 1 MNRLSR-LVTPINSPKSRRFFTFITTVKSQIPLRRGPTSLPLSLTKQFSPLLSTRITSFA 59
+ R++R L+T ++SP S RFF+ TT KS PLR T+L +S +SP RIT+FA
Sbjct: 6 VKRMTRSLLTQLSSPHSHRFFSSTTTTKS--PLRHHQTTL-ISTRPTYSPPKFLRITTFA 62
Query: 60 TANDPNFPKMDPNPPESGEEFVHVDPLSESIVSLGDEVRDESSDRDETNGAVPVPEETKK 119
T N ESI DE+R++ + D V E K+
Sbjct: 63 TKN-------------------------ESIFDAADELREDDNKHD-------VASERKE 90
Query: 120 VLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCS 179
L E R+VV+LTC+S AEGG C VYLVGTAHVS+ SCREVEA+I +KPQVVFLELC+
Sbjct: 91 PL-HEFSRNVVVLTCESKAEGGKCVVYLVGTAHVSQASCREVEAVIRHVKPQVVFLELCA 149
Query: 180 SRVSMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEA 239
SRV +LT +NLKVPT+ EM++ WKK N I SWF A V L + PGSEF+VAFEEA
Sbjct: 150 SRVGLLTIRNLKVPTMKEMIEKWKKTQNAAQIFLSWFYATVGDKLGVVPGSEFQVAFEEA 209
Query: 240 MKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDV 299
K KV+LGDRP QIT RRT K+P WHK+K L + Q F S++ ++ M+K++DDV
Sbjct: 210 RKCEAKVVLGDRPAQITFRRTQGKLPFWHKVKFLCAVFVQTLFSSSSKSIDTMIKDLDDV 269
Query: 300 DMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK 359
+T+ +++SK +PT+MET+V ERDQYMSS LL++A EH+SVVAV+GKGHLQGIK YW+
Sbjct: 270 KKVTISTKKLSKQYPTVMETVVDERDQYMSSILLRIAKEHTSVVAVIGKGHLQGIKKYWE 329
Query: 360 QPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYINCK 404
QP+ + DL+ +P KP SALKVL AVAG+AI S +
Sbjct: 330 QPIELKDLLELPPQKPPFSALKVL-----AVAGMAIGSAFIFQAR 369
>gi|297823005|ref|XP_002879385.1| hypothetical protein ARALYDRAFT_344992 [Arabidopsis lyrata subsp.
lyrata]
gi|297325224|gb|EFH55644.1| hypothetical protein ARALYDRAFT_344992 [Arabidopsis lyrata subsp.
lyrata]
Length = 347
Score = 350 bits (898), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 191/369 (51%), Positives = 239/369 (64%), Gaps = 73/369 (19%)
Query: 75 ESGEEFVHVDP--------LSESIVSL------------------GDEVRDESSDRD--- 105
+SGEEFVH+D LSE+IV++ GD+ ES D D
Sbjct: 8 QSGEEFVHIDDPKPCRDFLLSENIVNVEEELLREEEDSNASSVITGDDSIGESGDDDICS 67
Query: 106 -------ETNGAVPVPE-----ETKKV-LPEELPRSVVILTCDSTAEGGTCDVYLVGTAH 152
+ G E +T+K+ LPEE +SV++LTC+ST EGG+CDVYLVGTAH
Sbjct: 68 IGESGDDDICGVADYVECAFETKTEKLELPEEFAKSVMVLTCESTVEGGSCDVYLVGTAH 127
Query: 153 VSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFGIL 212
ESCREVE +I LKPQ VF+ELC+SR+S+LTPQ L
Sbjct: 128 ---ESCREVETVIRSLKPQAVFVELCTSRLSILTPQTL---------------------- 162
Query: 213 YSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKL 272
K A LE+FPG+EFRVAFEEA KYGG V GDRPVQITL+RTW KMPLWHKIKL
Sbjct: 163 ------KAAKKLEVFPGAEFRVAFEEANKYGGAVFPGDRPVQITLQRTWGKMPLWHKIKL 216
Query: 273 LYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL 332
+YS + QA FLP ++L +MLK+M D DMLTLVIQEMSK FP+LMETLVHERD+YM+ L
Sbjct: 217 VYSIVSQAVFLPKPKELEKMLKDMSDADMLTLVIQEMSKEFPSLMETLVHERDKYMAYYL 276
Query: 333 LKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAG 392
L++A+EHSSVVAVVG+GHLQGIK W QP+ + +L+ +P+ + + +L L VAVAG
Sbjct: 277 LRLASEHSSVVAVVGRGHLQGIKKNWNQPINIKELLELPTNESIFTVKNILKYLVVAVAG 336
Query: 393 VAIISGIYI 401
AI+SG+Y+
Sbjct: 337 TAIVSGMYL 345
>gi|168046384|ref|XP_001775654.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673072|gb|EDQ59601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 284
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/282 (54%), Positives = 208/282 (73%), Gaps = 4/282 (1%)
Query: 121 LPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSS 180
LP E ++V+ L +S+A G C VY++GTAHVSK SC EV+A+I +KP VVFLELCSS
Sbjct: 2 LPAETGKNVLQLKAESSANDGVCLVYVIGTAHVSKASCEEVQALIRHVKPDVVFLELCSS 61
Query: 181 RVSMLTPQNLKVPTVGEMVDMWKKKH-NTFGILYSWFLAKVASHLEIFPGSEFRVAFEEA 239
R ++L P+ KVPTV M++ +KKK N FG+LYSWFLAKV LE+ PG+EFRVA+EEA
Sbjct: 62 RTNILLPRKNKVPTVSGMLESYKKKEMNVFGLLYSWFLAKVGEKLEVLPGTEFRVAYEEA 121
Query: 240 MKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDV 299
++ G V LGDRPVQITL+RTW M LW K K L+S L F +PSAE+ + +L++MD+
Sbjct: 122 VRCGASVTLGDRPVQITLKRTWGSMSLWLKTKFLFSVLTATFNMPSAEEFHALLEKMDES 181
Query: 300 DMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK 359
D LTL++QE+SK FPTL++TLV+ERD YM + L VA SSVVAVVG+GHL G+ +W+
Sbjct: 182 DELTLMVQELSKTFPTLLQTLVNERDLYMVANLRNVAQCRSSVVAVVGRGHLSGMSKHWE 241
Query: 360 QPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYI 401
+ + V +L+T+PS KPA L + S++ + V GVA+ GI++
Sbjct: 242 EDINVEELLTLPSKKPA-RRLWLWSTVALGVGGVAV--GIHV 280
>gi|51038056|gb|AAT93860.1| unknown protein [Oryza sativa Japonica Group]
Length = 335
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 163/294 (55%), Positives = 194/294 (65%), Gaps = 66/294 (22%)
Query: 119 KVLPEELPRSVVILTCDSTAE------GGTCDVYLVGTAHVSKESCREVEAIIDFLKPQV 172
K LPEEL + VV L C+++ E GGTC VY+VGTAHVS+ESC +V+A+ID+LKPQV
Sbjct: 101 KELPEELAKGVVCLECETSPEAEAAGAGGTCRVYVVGTAHVSQESCDQVKAVIDYLKPQV 160
Query: 173 VFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKH-NTFGILYSWFLAKVASHLEIFPGSE 231
PT+ EM+DMWKKK NTFGILYSWFLAKVAS L++ PG+E
Sbjct: 161 --------------------PTMNEMIDMWKKKKMNTFGILYSWFLAKVASQLDVLPGAE 200
Query: 232 FRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR 291
FRVAFEEAM YGGKVILGDRPVQ
Sbjct: 201 FRVAFEEAMSYGGKVILGDRPVQ------------------------------------- 223
Query: 292 MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHL 351
LK+M+DVDMLTLVIQEMSKAFPTLMETL+HERD YMSS LLKVA EHSSVVAVVGKGH+
Sbjct: 224 -LKDMEDVDMLTLVIQEMSKAFPTLMETLLHERDMYMSSKLLKVAKEHSSVVAVVGKGHV 282
Query: 352 QGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYINCKK 405
GIK W+QP+ + L+ +P K S +K+L+S+G A+ GV I +GIYI +K
Sbjct: 283 SGIKKNWEQPIEIESLLVLPVTKQGASKMKILASIG-ALGGVVIATGIYIWSRK 335
>gi|297789846|ref|XP_002862850.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308598|gb|EFH39108.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 285
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/362 (42%), Positives = 189/362 (52%), Gaps = 121/362 (33%)
Query: 75 ESGEEFVHVDP--------LSESIVSL-------------------GDEVRDESSDRDET 107
+SGEEFVH+D LSESIV++ GD+ ES D D
Sbjct: 8 QSGEEFVHIDDPKPSRDFLLSESIVNVEKEELLREEVDSNASSVITGDDSIGESGDDDIC 67
Query: 108 NGA--VPVPEET---KKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSK---ESCR 159
A V ET K LPEE +SV++LTC+ST EGG+CDVYLVGTAHVS+ ESCR
Sbjct: 68 GVADYVECAFETRTEKLELPEEFAKSVMVLTCESTVEGGSCDVYLVGTAHVSQSLLESCR 127
Query: 160 EVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAK 219
EVE +I LKPQ
Sbjct: 128 EVETVIRSLKPQA----------------------------------------------- 140
Query: 220 VASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQ 279
A LE+FPG+EFRVAFEEA KYGG V GDRPVQ
Sbjct: 141 -AKKLEVFPGAEFRVAFEEANKYGGAVFPGDRPVQ------------------------- 174
Query: 280 AFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEH 339
LK+M D DMLT++IQEMSK FP+LMETLVHERD+YM+ LL++A+EH
Sbjct: 175 -------------LKDMSDADMLTMMIQEMSKEFPSLMETLVHERDKYMAYLLLRLASEH 221
Query: 340 SSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGI 399
SSVVAVVG+GHLQGIK W QP+ + +L+ +P+ + + +L L V VAG AI+SG+
Sbjct: 222 SSVVAVVGRGHLQGIKKNWNQPINIKELLELPTNESIFTVKNILKYLVVVVAGTAIVSGM 281
Query: 400 YI 401
Y+
Sbjct: 282 YL 283
>gi|302819548|ref|XP_002991444.1| hypothetical protein SELMODRAFT_161635 [Selaginella moellendorffii]
gi|300140837|gb|EFJ07556.1| hypothetical protein SELMODRAFT_161635 [Selaginella moellendorffii]
Length = 328
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 156/239 (65%), Gaps = 1/239 (0%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
++ +SV ++ S G VY+VGTAH+SKESC VEA+I +KP+ VFLELC R S
Sbjct: 90 KMRKSVEVIHHISGETGLESTVYMVGTAHISKESCDLVEAVIKLVKPEAVFLELCRERCS 149
Query: 184 MLTPQNLKVPTVGEMVDMWK-KKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKY 242
+L +PTV +M++ W+ KK N+FGI+YS+FLAK A LE+ PG EFR A+E
Sbjct: 150 LLLKTTNGIPTVKQMLESWRSKKMNSFGIIYSYFLAKAAQRLEVPPGGEFRRAYEIGRAC 209
Query: 243 GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDML 302
VILGDRP I+L+R ++ LW K+KL + L+ LP AE+L +ML E+ D D
Sbjct: 210 NALVILGDRPASISLKRAVARLTLWQKMKLGGTLLWSIIRLPGAEELEKMLTELTDTDEF 269
Query: 303 TLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP 361
++E K FPTL++ L+ ERD +M+STL ++++SVVAVVGKGH+ GI W +P
Sbjct: 270 VKFLREYCKNFPTLLDALLTERDLFMTSTLRSACSKYASVVAVVGKGHVSGIIANWTKP 328
>gi|357498371|ref|XP_003619474.1| TraB domain-containing protein [Medicago truncatula]
gi|355494489|gb|AES75692.1| TraB domain-containing protein [Medicago truncatula]
Length = 309
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 191/309 (61%), Gaps = 51/309 (16%)
Query: 104 RDETNGAVPVPEETKKV-LPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVE 162
RD++ P E +++ LP+EL ++V+ L+CDS +GG CDVYLVGT H +KES ++VE
Sbjct: 37 RDQS----PEKERQRRLELPKELTKNVIQLSCDSMEKGGVCDVYLVGTFHGNKESSKQVE 92
Query: 163 AIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVD-MWKKKHNTFGILYSWFLAK-- 219
I+ FLKP++VFLELCS R +L N++ T+GEM D M K+K++ F ++ SW A+
Sbjct: 93 EIVKFLKPEIVFLELCSDRQEVLLHDNMEALTMGEMNDAMRKEKYSIFRMVTSWLDAEAC 152
Query: 220 --VASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFL 277
+ S + +P ++FR A++EA+KY G V+LGDR ++ITL+RTW K+PLWH KLL
Sbjct: 153 FNIDSRCDGYPFAQFRSAYKEAIKYSGIVVLGDRRLEITLKRTWSKLPLWHIPKLLIR-- 210
Query: 278 FQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVAT 337
FPT+ E +VHERD+YMS TLL VA
Sbjct: 211 -----------------------------------FPTIREAMVHERDRYMSHTLLTVAR 235
Query: 338 EHSSVVAVVGKGHLQGIKNYWKQPVPVHDLM---TIPSPKPAVSALKVLSSLGVAVA-GV 393
+ +VVAVVG+GHL+GIK WKQP+ + +L TIP PKPA+ A+++ + L + V GV
Sbjct: 236 KSRTVVAVVGEGHLEGIKKNWKQPIEIQELQELCTIPPPKPAIPAMRLFAILCIVVVLGV 295
Query: 394 AIISGIYIN 402
+ G ++
Sbjct: 296 SAAFGFHVK 304
>gi|307111788|gb|EFN60022.1| hypothetical protein CHLNCDRAFT_59535 [Chlorella variabilis]
Length = 296
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 177/284 (62%), Gaps = 7/284 (2%)
Query: 115 EETKKVLPEELPRSVVILTCD-STAEGGTCDV-YLVGTAHVSKESCREVEAIIDFLKPQV 172
E+ + P LP+ + +L C A GG V Y++GTAHVS ESC +V A+I +KPQV
Sbjct: 5 EDAEVQAPNTLPQPLAVLRCRPEGAYGGPETVFYVLGTAHVSSESCEDVTALIRAVKPQV 64
Query: 173 VFLELCSSRVSMLTPQNLKVPTVGE-MVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSE 231
V +ELC+ R +LT L+ PT+ E + ++ + + F +YSW LAKV HL++ PG E
Sbjct: 65 VVVELCAERKPILTADKLREPTLTEVLTEIRAGRASPFQGIYSWLLAKVGKHLDVMPGEE 124
Query: 232 FRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR 291
FRVA EA G V+LGDRP+ ITL R W + LW K+KL + L+ L E++ +
Sbjct: 125 FRVALREAHALGAHVVLGDRPLTITLARVWHALSLWEKLKLTGTLLWTGLSLLDTEEMRQ 184
Query: 292 MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHL 351
+++M + D+LT I+E K FP+L+ L+ ERDQ+M+ L K+A +VVA+VG GHL
Sbjct: 185 EIEKMKETDVLTEAIKEFGKEFPSLIRPLLTERDQFMTFMLRKLAPRAHTVVAIVGAGHL 244
Query: 352 QGIKNYWKQPVPVHDLMTIPSPK--PAVSALKV--LSSLGVAVA 391
QGI+++W + + + ++ +P+ + PA +V L++ GV V+
Sbjct: 245 QGIRDHWDKQINIAEITAMPAERQPPAWRWRRVALLTAGGVLVS 288
>gi|3831462|gb|AAC69944.1| hypothetical protein [Arabidopsis thaliana]
Length = 302
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/370 (38%), Positives = 174/370 (47%), Gaps = 122/370 (32%)
Query: 65 NFPKMDPNPPESGEEFVHVDPLSESIVSLGDEVRDESSDRDETNGAVPVPEETKKVLPEE 124
N K D E+ + V SI GD +D E V V K LPEE
Sbjct: 20 NVDKEDLRREEADSDAGSVIICDHSICDSGDGDICAVADYVE---CVAVETTEKLELPEE 76
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSK---ESCREVEAIIDFLKPQVVFLELCSSR 181
+SV++LTC+STAEGG+CDVYLVGTAHVS+ ESCREVEA+I LKPQ
Sbjct: 77 FAKSVMVLTCESTAEGGSCDVYLVGTAHVSQVILESCREVEAVISALKPQA--------- 127
Query: 182 VSMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMK 241
A LE+FPG+EFRV FEEA K
Sbjct: 128 ---------------------------------------AKKLEVFPGAEFRVGFEEANK 148
Query: 242 YGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDM 301
YGG+V LGDR VQ LK++ D DM
Sbjct: 149 YGGRVFLGDRSVQ--------------------------------------LKDLGDGDM 170
Query: 302 LTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP 361
LTL IQEMS FPTLMETLVHERD+YM+ LL++A+EHSSVVAVVG+GHLQGIK W Q
Sbjct: 171 LTLAIQEMSTEFPTLMETLVHERDKYMAYQLLRIASEHSSVVAVVGRGHLQGIKKNWNQT 230
Query: 362 VPV------------------------------HDLMTIPSPKPAVSALKVLSSLGVAVA 391
+ V +LM +P+ + + +L + V V
Sbjct: 231 INVSNLINTHLVENNTINRANFVTITVLMVLQIKELMELPTNESIFTVKNILKYMVVVVV 290
Query: 392 GVAIISGIYI 401
G AI+SG+Y+
Sbjct: 291 GTAIVSGMYL 300
>gi|168064461|ref|XP_001784180.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664252|gb|EDQ50978.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 599
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 176/302 (58%), Gaps = 30/302 (9%)
Query: 95 DEVR-DESSDRDETNGAVPVPEETK-------KVLPEELPRSVVILTCDS---TAEGGTC 143
+E R DE +R N A+ E + K LP E + VV L +S A G C
Sbjct: 283 NETRGDEEEERLSVNDAINCTLEGEGEYLFNPKPLPLEAGKHVVELRVESIALDAPDGLC 342
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
V ++G HVSKESC EV+A+I +KP VVFLELCS R + L P+ KV T M++ +K
Sbjct: 343 IVNIIGITHVSKESCEEVQALIRHVKPAVVFLELCSQRTNALLPRENKVLTFSGMLESYK 402
Query: 204 KKH-NTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQ-------- 254
KK N FG++YS +LAKV L++ PG++FRVA+EEA++ G VIL DRP+Q
Sbjct: 403 KKETNLFGLMYSLYLAKVGEKLDVIPGTQFRVAYEEAVRCGATVILEDRPIQACGCILRD 462
Query: 255 ITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFP 314
+T + + K KLL +F +F L++MD LTL+ QE SK+FP
Sbjct: 463 LTYPFAVQMSNRYEKSKLLSLCVFCSF----------CLEKMDQSGDLTLMAQEWSKSFP 512
Query: 315 TLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPK 374
L +TLV ERD YM S L VA+ SSVVA+VG+ HL G+ +W + + V +LMT+P K
Sbjct: 513 ILSDTLVQERDLYMVSRLRNVASCSSSVVAIVGRSHLSGMAEHWNEDINVEELMTLPLKK 572
Query: 375 PA 376
P+
Sbjct: 573 PS 574
>gi|255080922|ref|XP_002504027.1| predicted protein [Micromonas sp. RCC299]
gi|226519294|gb|ACO65285.1| predicted protein [Micromonas sp. RCC299]
Length = 383
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 169/283 (59%), Gaps = 24/283 (8%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTV----- 195
G C+V+L+GTAHVS +S R+ ++ ++P VVFLELC +R ++ P+ VPT
Sbjct: 90 GICEVHLLGTAHVSWDSARDAVRLVRAIRPDVVFLELCEARRRVIQPRPTDVPTDEPPSP 149
Query: 196 GEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGG-KVILGDRPVQ 254
MV+MW++ +GI+++W LA A L + PG+EF A A + GG +V+LGDR V
Sbjct: 150 SRMVEMWRRGTPVWGIVHAWMLAVAAKELGVPPGAEFAAAAAAASEVGGCEVVLGDRDVG 209
Query: 255 ITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFP 314
TLRRTW + +W +++ +++ + F +P+ ++L RM++E+ D D LT +++ + FP
Sbjct: 210 TTLRRTWHALSVWERVRFVWAMIAGGFNVPNGDELRRMIEELKDADALTEAFKQLGEDFP 269
Query: 315 TLMETLVHERDQYMSSTLLKVATE--HSS-------VVAVVGKGHLQGIKNYWKQPVPVH 365
+L+ L+HERD YM + L ++A H +VAVVG GH G++++ P
Sbjct: 270 SLLAPLIHERDAYMVAGLRQIAHRDPHGGNHRPCRKIVAVVGAGHCSGMEDFLSVPWAPG 329
Query: 366 DLMTI-------PSPKPAVSALKVLS-SLGVAVAGVAIISGIY 400
D+ +I P P+ + +V++ S+G+ +AG +++ +Y
Sbjct: 330 DVASILAEMNEVPDPRDWERSRRVIAWSVGLTLAG-SVLGTVY 371
>gi|302813306|ref|XP_002988339.1| hypothetical protein SELMODRAFT_427030 [Selaginella moellendorffii]
gi|300144071|gb|EFJ10758.1| hypothetical protein SELMODRAFT_427030 [Selaginella moellendorffii]
Length = 535
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/358 (34%), Positives = 181/358 (50%), Gaps = 17/358 (4%)
Query: 23 ITTVKSQIPLRRGPTSLPLSLTKQFSPLLSTRITSFATANDPNFPKMDPNPPESGEEFVH 82
+ T+ + P R SLP++ S + R + +T D D PP+ E F
Sbjct: 161 VWTISANAPHR----SLPVATIHLTSSKVLGRSMAESTTGDAAAKVCDAPPPDRSENF-K 215
Query: 83 VDPLSESIVSLGDEVRDESSDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGT 142
VDP S+ +V + D V E ++ ++ +
Sbjct: 216 VDPGSDRLVRVDDSVETEKTENHAGAEEQEDRRGEEEGEEAQGKEEEGEEEEALRELPEK 275
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
+ H+S E+ E + VFLELC R S+L +PTV +M++ W
Sbjct: 276 MRKSVEVIHHISGETGLESTVYM------AVFLELCRERCSLLLKTTNGIPTVKQMLESW 329
Query: 203 K-KKHNTFGILYSWFLAKV----ASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ KK N+FGI+YS+FLAKV A LE+ PG EFR A+E VILGDRP I+L
Sbjct: 330 RSKKMNSFGIIYSYFLAKVSFLAAQRLEVPPGGEFRRAYEIGRACNALVILGDRPASISL 389
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLM 317
+R ++ LW K+KL + L+ LP AE+L +ML E+ D D ++E K FPTL+
Sbjct: 390 KRAVARLTLWQKMKLGGTLLWSIICLPGAEELEKMLTELTDTDEFVKFLREYCKNFPTLL 449
Query: 318 ETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQG-IKNYWKQPVPVHDLMTIPSPK 374
+ L+ ERD +M+STL ++++SVVAVVGKGH+ G I N+ K P+ V L+ +P K
Sbjct: 450 DALLTERDLFMTSTLRSACSKYASVVAVVGKGHVSGIIANWTKPPIEVDALLEVPEKK 507
>gi|384250740|gb|EIE24219.1| TraB-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 297
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 162/312 (51%), Gaps = 28/312 (8%)
Query: 99 DESSDRD---ETNGAVPVPEETKKVLPEELPRSVVILTC-DSTAEGGTCDVYLVGTAHVS 154
+ES+D D E V P E + + LP +LTC D G YLVGTAHV
Sbjct: 9 EESADVDVFGEPQDIVQRPSELDPM--DSLPSCCTVLTCSDPQDFGREQTFYLVGTAHV- 65
Query: 155 KESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK-KHNTFGILY 213
VFLELC R S LT +V GE+ +W+ K + Y
Sbjct: 66 ------------------VFLELCVERRSTLTMTKEEVLAPGELFKLWRAGKVPLLFVAY 107
Query: 214 SWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLL 273
SW L++VA L + PG EFR A EA + G KV+LGDRPV++TL RTW + W K++ +
Sbjct: 108 SWMLSQVADALGVLPGEEFRAALLEAQQVGAKVVLGDRPVRVTLARTWSALSRWSKVRFI 167
Query: 274 YSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLL 333
+ L F + ++DL +++M + D+LT ++++++ FP LM L+ ERD+YM L
Sbjct: 168 WGLLTTGFCV--SDDLKAEVEKMKEADVLTQAMKDLAEEFPELMRPLIQERDEYMVFLLR 225
Query: 334 KVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGV 393
+A+ S VVAVVG GHL G++ W + ++ +P+ S + ++GV
Sbjct: 226 ALASRASKVVAVVGAGHLPGMRERWNAEIDFEEISRMPAAPQKSSNWPWRRMALLGISGV 285
Query: 394 AIISGIYINCKK 405
A+ + + + ++
Sbjct: 286 AVTAVVTLRRRR 297
>gi|428177717|gb|EKX46595.1| hypothetical protein GUITHDRAFT_137989 [Guillardia theta CCMP2712]
Length = 729
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 146/289 (50%), Gaps = 32/289 (11%)
Query: 136 STAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTV 195
+T GGT VYL+ V+ E C A++ + P+ + SS + L P +
Sbjct: 433 TTPGGGT--VYLI----VAVELCEARRAMLFHIPPESLTFAGASSSAASLADVAAGTPAI 486
Query: 196 GEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYG--GKVILGDRPV 253
M M K N F +LYSWFL+ V++ LE+ PG EFRVA+EE+ K +L DRPV
Sbjct: 487 --MSKMKDKDSNLFSLLYSWFLSNVSTRLEVAPGEEFRVAYEESKKLSPPSSFLLIDRPV 544
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLFQAFFLPS----------------AEDLNRMLKEMD 297
IT+ R W + W K+KL + + + +PS A++LN M++ +
Sbjct: 545 HITVARMWAGITTWEKLKLCWMLVRETLLIPSGSAPLPLCDEPDGKLPADELNEMVESLK 604
Query: 298 DVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA---TEHSSVVAVVGKGHLQGI 354
D +T+ + E+ FP L+E L+ ERDQY+ L K A +E +VAVVG GH+ GI
Sbjct: 605 QTDAMTMAVMELGSKFPGLIEPLMTERDQYLCYMLRKKAQSVSEGVRIVAVVGAGHIAGI 664
Query: 355 KNYWKQPVPVHDLMTIP---SPKPAVSALKVLSSLGVAVAGVAIISGIY 400
K +W++P+ + + +P P PA + + V G + S Y
Sbjct: 665 KKFWEEPIDLRKICCLPVSSRPHPATRIFRGFALGATVVTGFLVSSYSY 713
>gi|328704649|ref|XP_001949250.2| PREDICTED: traB domain-containing protein-like [Acyrthosiphon
pisum]
Length = 328
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 148/283 (52%), Gaps = 32/283 (11%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQ-----NLKVPTVGEMV 199
VYLVGTAH S+ES +V +I+ +KP VV +ELC +R S+LT N+ T+ ++
Sbjct: 23 VYLVGTAHFSEESQEDVAQVINAVKPDVVVIELCYNRNSILTIDESTIANVSGITLEDLK 82
Query: 200 DMWKKKHNTFGILYSWFL---AKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
KK T GI Y + A ++ L + PG EFR A EA KY + LGDRPV IT
Sbjct: 83 GSIKKLGLTQGIFYQLMINISANISRDLGMIPGGEFRRAVIEAKKYNSHIYLGDRPVDIT 142
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
++R + IKLL LF A F + ED+ + + D+L ++ EM+ +P L
Sbjct: 143 IKRVISMLSWPKSIKLLAHLLFTADFKITKEDVEK----FKNKDLLETLMHEMAADYPEL 198
Query: 317 METLVHERDQYMSSTLLKVA---------------TEHSSVVAVVGKGHLQGIKNYWKQ- 360
+V ERD++++ +L A + +V VVG GH+ GIK YW++
Sbjct: 199 ERVIVDERDKFLTYSLQNCAGFVIEKTGNKPNIFNSRPQVIVGVVGLGHVAGIKKYWEKI 258
Query: 361 -PVPVHDLMTIPSPKPAVSALKV---LSSLGVAVAGVAIISGI 399
+ +L+ IP + +KV +S+ G+ + GV+ I G+
Sbjct: 259 SDEQIAELIIIPPQSRSSKVIKVVIKVSAYGLLLWGVSKIPGV 301
>gi|156386244|ref|XP_001633823.1| predicted protein [Nematostella vectensis]
gi|156220898|gb|EDO41760.1| predicted protein [Nematostella vectensis]
Length = 302
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 156/303 (51%), Gaps = 36/303 (11%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
+LP +V L T EG C VY++GTAH SKES +V I ++P V +ELC SR+
Sbjct: 1 DLPETVTKL---ETPEG--CVVYVIGTAHFSKESQEDVAKTIQAVQPDRVLVELCKSRID 55
Query: 184 MLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRV 234
+L + + +DM K K+ G + L +++H L + PG EFR
Sbjct: 56 ILKYDEEFLLREAKNIDMQKLKLAIKQSGVVGGIMQVLLLSMSAHITQQLGMAPGGEFRA 115
Query: 235 AFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
A+ EA K G +V LGDRP+Q+TL R + +W K+KL + L + S ED+ R +
Sbjct: 116 AYREARKLGCQVHLGDRPIQVTLSRAMAALTVWQKVKLAWHLLTTKEPI-SPEDVERCKQ 174
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEH-----------SSVV 343
+ D+L ++ EM+ FP L + V ERDQY++ +L A + S V
Sbjct: 175 K----DLLAEMLAEMTGDFPLLYKVFVTERDQYLARSLRLSAVPNILSNEIGGIIPSVTV 230
Query: 344 AVVGKGHLQGI-KNYWK-QPVPVHDLMTIP----SPKPAVSALKVLSSLGVAVAGVAIIS 397
VVG GH+ GI +N+ K + + + +LM IP + K ++LK L V+ GV +
Sbjct: 231 GVVGIGHVAGIVENFHKFEEIDIQELMRIPEATLASKVLKTSLKAAVGLTVSAFGVFLAW 290
Query: 398 GIY 400
G Y
Sbjct: 291 GCY 293
>gi|298675709|ref|YP_003727459.1| TraB family protein [Methanohalobium evestigatum Z-7303]
gi|298288697|gb|ADI74663.1| TraB family protein [Methanohalobium evestigatum Z-7303]
Length = 462
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 141/269 (52%), Gaps = 16/269 (5%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
+ ++GTAHVS++S EV I KP +V +ELC SR L ++ V +
Sbjct: 61 TQIKIIGTAHVSQKSIDEVVDSIKQEKPDIVAVELCRSRYEGLKGEDKSNEEVS--IKQL 118
Query: 203 KKKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
+ + L W LA K+ + + PGSE A + A + G + L DR +QITLR
Sbjct: 119 IGEGKIYFFLMQWLLAYMQKKIGKEMGVKPGSEMISAIDAAEEIGADIALVDRDIQITLR 178
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R W KM + KIK++ S + + + N + + + D++T++++E+ K PT E
Sbjct: 179 RFWNKMGFFEKIKMIGSLVGGIVGIGGKQMQNVDMDNITNQDVVTMLVEELRKIAPTAAE 238
Query: 319 TLVHERDQYMSSTLLKVATEHSS---VVAVVGKGHLQGIKNYWKQP--VP-VHDLMTIPS 372
L+ ERD Y++ +L+ VA S ++AVVG GH GI+ Y QP +P +++L T+P
Sbjct: 239 VLIDERDAYIAGSLVNVAANAGSGKKIIAVVGAGHKSGIQKYLSQPDTIPSLNELNTLPK 298
Query: 373 PKPAVSALKVLSSLGVAVAGVAIISGIYI 401
+ + + G A+ G+AI + + I
Sbjct: 299 KRK----FSITKAFGFAIVGLAIATFLLI 323
>gi|410670936|ref|YP_006923307.1| TraB family protein [Methanolobus psychrophilus R15]
gi|409170064|gb|AFV23939.1| TraB family protein [Methanolobus psychrophilus R15]
Length = 465
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 145/267 (54%), Gaps = 13/267 (4%)
Query: 136 STAEGGT---CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML--TPQNL 190
ST E G ++ +VGTAHVS++S REV I +P +V +ELCS R + QN
Sbjct: 55 STTEAGALPPTEIIIVGTAHVSEKSVREVNNAISRERPDIVAVELCSPRYEAIKGNVQNT 114
Query: 191 KVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGD 250
+VP V E++ K +L + K A + I PG+E A E A G +V+L D
Sbjct: 115 QVP-VKELLKEGKIYFYIVHMLLAHIQKKFADQMGIQPGAEMISAIEAAEASGAQVLLID 173
Query: 251 RPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMS 310
R VQ+TL+R W +M KIK++ L + +D++ + + + D+++++++E
Sbjct: 174 RNVQVTLQRFWNEMGFIEKIKMMGGLLAAVLGIGGTKDID--MDTITNQDIVSVLVEEFR 231
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVA-TEHSSVVAVVGKGHLQGIKNYWKQPVPVHDL-M 368
+ P ++ L+ ERD YM+ LL+ A + +VAVVG GH GI+ Y + P + +
Sbjct: 232 VSSPNAVKVLIDERDAYMARNLLRAAGSGGKKIVAVVGAGHRAGIQRYLENPASLPKVDY 291
Query: 369 TIPSPKPAVSALKVLSSLGVAVAGVAI 395
++ +PK S +K+ G A+ G+AI
Sbjct: 292 SVETPKKRFSLVKL---FGFAIVGIAI 315
>gi|71988206|ref|NP_501004.2| Protein F38A5.2, isoform a [Caenorhabditis elegans]
gi|351059579|emb|CCD67168.1| Protein F38A5.2, isoform a [Caenorhabditis elegans]
Length = 452
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 135/279 (48%), Gaps = 35/279 (12%)
Query: 126 PRSVVILTCDSTAEGGTCD--VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
PR+ V+ D + D +YL+GTAH SKES +V I ++P V LELC SR+S
Sbjct: 137 PRNPVLSDSDEEWKKAILDSTIYLIGTAHFSKESQEDVSNTIRAVQPDFVMLELCPSRIS 196
Query: 184 MLTPQNLKVPTVG------EMVDMWKKKHNTFGILYSWFL---AKVASHLEIFPGSEFRV 234
+++ ++ + +++ K+ GIL+ L A V L + PG EFR
Sbjct: 197 IISMDEARLLSEAKDLNSQKIIQTMKQNGAIQGILHVLLLSMSAHVTRELSMAPGGEFRA 256
Query: 235 AFEEAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRML 293
A A+ +V+LGDRP+Q+TL+R + +W KI+ + F +AE++ R
Sbjct: 257 AHRAAVATENCRVVLGDRPIQVTLQRALASLSIWQKIRFFFHVAFSHREKITAEEVERCK 316
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHS------------- 340
+ D+L ++ EM+ FP L + V ERD YM+ L + +S
Sbjct: 317 QR----DLLEQLLAEMADDFPQLSQIFVEERDAYMTHALHMLVHRNSVEKRAQWLRGTTG 372
Query: 341 ------SVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
+VVAVVG GH GI N W + LM IP P
Sbjct: 373 QQFQPLTVVAVVGIGHTPGIVNKWNTNIDFDPLMNIPPP 411
>gi|71988217|ref|NP_501005.2| Protein F38A5.2, isoform b [Caenorhabditis elegans]
gi|351059580|emb|CCD67169.1| Protein F38A5.2, isoform b [Caenorhabditis elegans]
Length = 450
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 135/279 (48%), Gaps = 35/279 (12%)
Query: 126 PRSVVILTCDSTAEGGTCD--VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
PR+ V+ D + D +YL+GTAH SKES +V I ++P V LELC SR+S
Sbjct: 135 PRNPVLSDSDEEWKKAILDSTIYLIGTAHFSKESQEDVSNTIRAVQPDFVMLELCPSRIS 194
Query: 184 MLTPQNLKVPTVG------EMVDMWKKKHNTFGILYSWFL---AKVASHLEIFPGSEFRV 234
+++ ++ + +++ K+ GIL+ L A V L + PG EFR
Sbjct: 195 IISMDEARLLSEAKDLNSQKIIQTMKQNGAIQGILHVLLLSMSAHVTRELSMAPGGEFRA 254
Query: 235 AFEEAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRML 293
A A+ +V+LGDRP+Q+TL+R + +W KI+ + F +AE++ R
Sbjct: 255 AHRAAVATENCRVVLGDRPIQVTLQRALASLSIWQKIRFFFHVAFSHREKITAEEVERCK 314
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHS------------- 340
+ D+L ++ EM+ FP L + V ERD YM+ L + +S
Sbjct: 315 QR----DLLEQLLAEMADDFPQLSQIFVEERDAYMTHALHMLVHRNSVEKRAQWLRGTTG 370
Query: 341 ------SVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
+VVAVVG GH GI N W + LM IP P
Sbjct: 371 QQFQPLTVVAVVGIGHTPGIVNKWNTNIDFDPLMNIPPP 409
>gi|7500761|pir||T29896 hypothetical protein F38A5.2 - Caenorhabditis elegans
Length = 465
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 135/279 (48%), Gaps = 35/279 (12%)
Query: 126 PRSVVILTCDSTAEGGTCD--VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
PR+ V+ D + D +YL+GTAH SKES +V I ++P V LELC SR+S
Sbjct: 149 PRNPVLSDSDEEWKKAILDSTIYLIGTAHFSKESQEDVSNTIRAVQPDFVMLELCPSRIS 208
Query: 184 MLTPQNLKVPTVG------EMVDMWKKKHNTFGILYSWFL---AKVASHLEIFPGSEFRV 234
+++ ++ + +++ K+ GIL+ L A V L + PG EFR
Sbjct: 209 IISMDEARLLSEAKDLNSQKIIQTMKQNGAIQGILHVLLLSMSAHVTRELSMAPGGEFRA 268
Query: 235 AFEEAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRML 293
A A+ +V+LGDRP+Q+TL+R + +W KI+ + F +AE++ R
Sbjct: 269 AHRAAVATENCRVVLGDRPIQVTLQRALASLSIWQKIRFFFHVAFSHREKITAEEVERCK 328
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHS------------- 340
+ D+L ++ EM+ FP L + V ERD YM+ L + +S
Sbjct: 329 QR----DLLEQLLAEMADDFPQLSQIFVEERDAYMTHALHMLVHRNSVEKRAQWLRGTTG 384
Query: 341 ------SVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
+VVAVVG GH GI N W + LM IP P
Sbjct: 385 QQFQPLTVVAVVGIGHTPGIVNKWNTNIDFDPLMNIPPP 423
>gi|452209903|ref|YP_007490017.1| Pheromone shutdown protein [Methanosarcina mazei Tuc01]
gi|452099805|gb|AGF96745.1| Pheromone shutdown protein [Methanosarcina mazei Tuc01]
Length = 512
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 167/329 (50%), Gaps = 24/329 (7%)
Query: 73 PPESGEEFVHVDP--LSESIVSLGDEVRDESSDRDETNGAVPVPEETKKVLPEELPRSVV 130
P ES E V V LS+S ++ +E+ S E P + + PE LP SV
Sbjct: 32 PIESKEGNVSVGKFKLSDSSINNPEEIISVPSSTTEIEKVEMKPGRGEGLNPELLPASVS 91
Query: 131 ILTC------------DSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELC 178
L +S+ E V L+GTAHVS++S EV + I LKP +V +ELC
Sbjct: 92 ELLIPSPFQPQIPDGNNSSVEFHPSKVVLIGTAHVSEKSVNEVRSAIRNLKPDIVAVELC 151
Query: 179 SSRVSML---TPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVA 235
+R L P+ +VP + E++ K + L ++ K+ + + PGSE A
Sbjct: 152 RARYDSLKGNVPETNQVP-IKEILTEGKVYYYLVHWLLAYVQKKIGEDMGVKPGSEMISA 210
Query: 236 FEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKE 295
EEA G K+ L DR +Q+TL+R W +M KIK+L S + + +++ + +
Sbjct: 211 IEEAEASGAKIALIDRDIQVTLQRFWGRMKFTEKIKMLGSLIGGLIGIGKGAEID--IDQ 268
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVAT-EHSSVVAVVGKGHLQGI 354
+ D++T ++ E+ + PT ETL+ ERD Y++ ++L+ A + ++VAV+G GH G+
Sbjct: 269 ITQQDVVTALVSELREFAPTAAETLIDERDAYLAGSILRTAAGGNKTIVAVIGAGHKPGV 328
Query: 355 KNYWKQPV---PVHDLMTIPSPKPAVSAL 380
NY + P P++ LM IP + + +
Sbjct: 329 INYLENPKSLPPLNSLMQIPKKRFGIGKI 357
>gi|21227421|ref|NP_633343.1| pheromone shutdown protein [Methanosarcina mazei Go1]
gi|20905787|gb|AAM31015.1| Pheromone shutdown protein [Methanosarcina mazei Go1]
Length = 501
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 167/329 (50%), Gaps = 24/329 (7%)
Query: 73 PPESGEEFVHVDP--LSESIVSLGDEVRDESSDRDETNGAVPVPEETKKVLPEELPRSVV 130
P ES E V V LS+S ++ +E+ S E P + + PE LP SV
Sbjct: 21 PIESKEGNVSVGKFKLSDSSINNPEEIISVPSSTTEIEKVEMKPGRGEGLNPELLPASVS 80
Query: 131 ILTC------------DSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELC 178
L +S+ E V L+GTAHVS++S EV + I LKP +V +ELC
Sbjct: 81 ELLIPSPFQPQIPDGNNSSVEFHPSKVVLIGTAHVSEKSVNEVRSAIRNLKPDIVAVELC 140
Query: 179 SSRVSML---TPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVA 235
+R L P+ +VP + E++ K + L ++ K+ + + PGSE A
Sbjct: 141 RARYDSLKGNVPETNQVP-IKEILTEGKVYYYLVHWLLAYVQKKIGEDMGVKPGSEMISA 199
Query: 236 FEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKE 295
EEA G K+ L DR +Q+TL+R W +M KIK+L S + + +++ + +
Sbjct: 200 IEEAEASGAKIALIDRDIQVTLQRFWGRMKFTEKIKMLGSLIGGLIGIGKGAEID--IDQ 257
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVAT-EHSSVVAVVGKGHLQGI 354
+ D++T ++ E+ + PT ETL+ ERD Y++ ++L+ A + ++VAV+G GH G+
Sbjct: 258 ITQQDVVTALVSELREFAPTAAETLIDERDAYLAGSILRTAAGGNKTIVAVIGAGHKPGV 317
Query: 355 KNYWKQPV---PVHDLMTIPSPKPAVSAL 380
NY + P P++ LM IP + + +
Sbjct: 318 INYLENPKSLPPLNSLMQIPKKRFGIGKI 346
>gi|320166249|gb|EFW43148.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 405
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 129/249 (51%), Gaps = 17/249 (6%)
Query: 135 DSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP--QNLKV 192
D+ +E DVY+VGTAH S SC +V ++I ++P V LELC RV +L P +
Sbjct: 135 DACSELPGIDVYIVGTAHFSTASCDDVTSVIRQVQPDTVVLELCRDRVQVLAPPANTANM 194
Query: 193 PTVGEMVDMWKKKHNTFGIL------YSWFLAKVASHLEIFPGSEFRVAFEEAMKY-GGK 245
P V + T G++ ++ F +K++ L++ G EFR A EA + G +
Sbjct: 195 PVVEFNLKNAVAATRTGGVMAVLKLIFASFSSKLSHDLQLVAGGEFRAALAEARQIPGCR 254
Query: 246 VILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLV 305
++LGDRP+ IT+ R + + W +LLY LF E +++ ML V
Sbjct: 255 IVLGDRPISITIARAFAALSAWDMTRLLYQALFSGPTFTKEE-----VEKYKSKAMLAQV 309
Query: 306 IQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ-PVPV 364
++E++ P+L L+ ERDQY++S L V V + GH+ GI+ +W + V
Sbjct: 310 MEELAAEVPSLATVLIDERDQYLTSCLRSVGARRVVAVVGI--GHVAGIEKHWNNGQIDV 367
Query: 365 HDLMTIPSP 373
+L++IP P
Sbjct: 368 AELLSIPPP 376
>gi|443724552|gb|ELU12512.1| hypothetical protein CAPTEDRAFT_182788 [Capitella teleta]
Length = 361
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 163/317 (51%), Gaps = 35/317 (11%)
Query: 108 NGAVPVPEE-TKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIID 166
G +P P K+ ELP +V +L D +G T VYLVGTAH S +S +V I+
Sbjct: 48 QGILPFPSNYLKRNTNPELPETVTVLHTD---KGST--VYLVGTAHFSTQSQDDVVKTIE 102
Query: 167 FLKPQVVFLELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFL 217
+P +V +ELC SR+ +L+ Q++ + + + ++
Sbjct: 103 ATQPDIVVVELCKSRIRILSLDEETLLKEAQDMNLQKIRAAIQDGGVVQGVLHLMMLSMS 162
Query: 218 AKVASHLEIFPGSEFRVAFEEAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSF 276
A V L + PG EFR AF+EA+K G + LGDRP++ITL+R + +W KIKL ++
Sbjct: 163 AYVTKQLGMAPGGEFRTAFKEALKIRGCRFHLGDRPIKITLQRVLGSLNVWQKIKLGWNL 222
Query: 277 LFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA 336
L + S ED+ R K+ D+L +++EM+ FP L LV ERDQ+++ +L A
Sbjct: 223 LTSKEPI-SKEDVERCKKK----DILEEMLKEMTGEFPALSRVLVTERDQFLAHSLEMAA 277
Query: 337 T----EHSSV-------VAVVGKGHLQGIKNYWKQP-VPVHDLMTIPSPKPAVSALKVLS 384
+SS V VVG GH +GI W+ + DLMT+P P + A+++
Sbjct: 278 QPIPDANSSTGTVPSVVVGVVGIGHQKGIVENWQNASCNIADLMTVPPPSKVLYAVRI-- 335
Query: 385 SLGVAVAGVAIISGIYI 401
+L ++V G+A G I
Sbjct: 336 TLRISVLGLAAYGGYQI 352
>gi|341892087|gb|EGT48022.1| hypothetical protein CAEBREN_29864 [Caenorhabditis brenneri]
Length = 451
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 136/279 (48%), Gaps = 35/279 (12%)
Query: 126 PRSVVILTCDSTAEGGT--CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
PR+ V+ D+ + +YLVGTAH SKES +V I ++P V LELC SR+S
Sbjct: 135 PRNPVLRDTDADWKAAIEGSKIYLVGTAHFSKESQEDVTNTIRAVQPDFVMLELCPSRIS 194
Query: 184 MLTPQNLKVPTVG------EMVDMWKKKHNTFGILYSWFL---AKVASHLEIFPGSEFRV 234
+++ ++ + +++ K+ GIL+ L A V L + PG EFR
Sbjct: 195 IISMDEARLLSEARDLNSQKIIQTMKQNGAIQGILHVLLLSMSAHVTRELSMAPGGEFRA 254
Query: 235 AFEEAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRML 293
A A+ +V+LGDRP+Q+TL+R + +W KI+ + F +AE++ R
Sbjct: 255 AHRAAVATENCRVVLGDRPIQVTLQRALASLSIWQKIRFFFHVAFSHREKITAEEVERCK 314
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL----LKVATEHSS-------- 341
+ D+L ++ EM+ FP L + V ERD YM+ L L+ A E +
Sbjct: 315 QR----DLLEQLLAEMADDFPQLSQIFVEERDAYMTHALHMLVLRNAIEKRAQWLRGTTG 370
Query: 342 -------VVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
+V+VVG GH GI N W + LM +P P
Sbjct: 371 QPFQPLTIVSVVGIGHTPGIVNKWNTTIDFDPLMVVPPP 409
>gi|341900886|gb|EGT56821.1| hypothetical protein CAEBREN_17148 [Caenorhabditis brenneri]
Length = 451
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 136/279 (48%), Gaps = 35/279 (12%)
Query: 126 PRSVVILTCDSTAEGGT--CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
PR+ V+ D+ + +YLVGTAH SKES +V I ++P V LELC SR+S
Sbjct: 135 PRNPVLRDTDADWKAAIEGSKIYLVGTAHFSKESQEDVTNTIRAVQPDFVMLELCPSRIS 194
Query: 184 MLTPQNLKVPTVG------EMVDMWKKKHNTFGILYSWFL---AKVASHLEIFPGSEFRV 234
+++ ++ + +++ K+ GIL+ L A V L + PG EFR
Sbjct: 195 IISMDEARLLSEARDLNSQKIIQTMKQNGAIQGILHVLLLSMSAHVTRELSMAPGGEFRA 254
Query: 235 AFEEAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRML 293
A A+ +V+LGDRP+Q+TL+R + +W KI+ + F +AE++ R
Sbjct: 255 AHRAAVATENCRVVLGDRPIQVTLQRALASLSIWQKIRFFFHVAFSHREKITAEEVERCK 314
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL----LKVATEHSS-------- 341
+ D+L ++ EM+ FP L + V ERD YM+ L L+ A E +
Sbjct: 315 QR----DLLEQLLAEMADDFPQLSQIFVEERDAYMTHALHMLVLRNAIEKRAQWLRGTTG 370
Query: 342 -------VVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
+V+VVG GH GI N W + LM +P P
Sbjct: 371 QPFQPLTIVSVVGIGHTPGIVNKWNTTIDFDPLMVVPPP 409
>gi|308469311|ref|XP_003096894.1| hypothetical protein CRE_24675 [Caenorhabditis remanei]
gi|308241309|gb|EFO85261.1| hypothetical protein CRE_24675 [Caenorhabditis remanei]
Length = 453
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 129/258 (50%), Gaps = 33/258 (12%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVG------EM 198
VYL+GTAH SKES +V I ++P V LELC SR+S+++ ++ + ++
Sbjct: 158 VYLIGTAHFSKESQEDVSNTIRAVQPDFVMLELCPSRISIISMDEARLLSEAKDLNSQKI 217
Query: 199 VDMWKKKHNTFGILYSWFL---AKVASHLEIFPGSEFRVAFEEAMKY-GGKVILGDRPVQ 254
+ K+ GIL+ L A V L + PG EFR A A+ +V+LGDRP+Q
Sbjct: 218 IQTIKQNGAIQGILHVLLLSMSAHVTRELSMAPGGEFRAAHRAAVATENCRVVLGDRPIQ 277
Query: 255 ITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFP 314
+TL+R + +W KI+ + F +AE++ R ++ D+L ++ EM+ FP
Sbjct: 278 VTLQRALASLSIWQKIRFFFHVAFSHREKITAEEVERCKQK----DLLEQLLAEMADDFP 333
Query: 315 TLMETLVHERDQYMSSTL----LKVATEHSS---------------VVAVVGKGHLQGIK 355
L + V ERD YM+ L L+ A E + +V+VVG GH GI
Sbjct: 334 QLSQIFVEERDAYMTHALHMLVLRNAIEKRAQWLRGTTGQPYQPLTIVSVVGIGHTPGIV 393
Query: 356 NYWKQPVPVHDLMTIPSP 373
N W + LM +P P
Sbjct: 394 NKWNTNIDFDPLMVVPPP 411
>gi|20088907|ref|NP_614982.1| TraB family protein [Methanosarcina acetivorans C2A]
gi|19913750|gb|AAM03462.1| TraB family protein [Methanosarcina acetivorans C2A]
Length = 513
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 145/260 (55%), Gaps = 18/260 (6%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDM 201
V L+GTAHVS++S EV I LKP +V +ELC +R L P+ ++P + E++
Sbjct: 120 VVLIGTAHVSEKSVAEVRNAIRNLKPDIVAVELCRARYDSLKGNIPETNQLP-IKEILSE 178
Query: 202 WKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTW 261
K + L ++ K+ + + PG+E A EA G +V L DR +Q+TL+R W
Sbjct: 179 GKVYYYLVHWLLAYVQKKIGDDMGVKPGAEMLSAIAEAEASGARVALIDRDIQVTLQRFW 238
Query: 262 EKMPLWHKIKLLYSFLFQAFFLPSAE-DLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
+M KIK+L S + + +E D++++ ++ D++T ++ E+ + PT ETL
Sbjct: 239 GRMKFTEKIKMLGSLIGGLIGIGGSEIDIDQITQQ----DVVTALVSELREFAPTAAETL 294
Query: 321 VHERDQYMSSTLLKVAT-EHSSVVAVVGKGHLQGIKNYWKQPV---PVHDLMTIPSPKPA 376
+ ERD Y++ ++L+VA + ++VAV+G GH G+ NY K P P+ LM +P +
Sbjct: 295 IDERDAYLAGSILRVAAGGNKTIVAVIGAGHKPGVINYLKNPKSIPPLSSLMELPKKRIG 354
Query: 377 VSALKVLSSLGVAVAGVAII 396
+ + +G + G+AI+
Sbjct: 355 IGKI-----VGFGIVGLAIL 369
>gi|91773680|ref|YP_566372.1| TraB family protein [Methanococcoides burtonii DSM 6242]
gi|91712695|gb|ABE52622.1| TraB family protein [Methanococcoides burtonii DSM 6242]
Length = 461
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 132/238 (55%), Gaps = 9/238 (3%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQ--NLKVPTVGEMVD 200
++ +VGTAHVS++S EV + I+ KP +V +ELC R L + + +P + +++
Sbjct: 65 SEIIIVGTAHVSEKSVNEVTSAIENEKPDIVAVELCQGRYDSLKGEVKDSDLP-IKDILS 123
Query: 201 MWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
K + +L ++ K+ + + PG+E A + A G KV L DR +Q+TL+R
Sbjct: 124 GGKIYYFLVHLLLAYVQKKIGDEMGVQPGAEMITAIDVAEANGAKVALVDRDIQLTLQRF 183
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W KM ++ K +L + + A + +++++ + + D DM+T +I E+ KA P L
Sbjct: 184 WSKMSIFEKFNMLVALVSSALGIGGSKNID--IDNITDQDMVTTLINELRKASPNAATVL 241
Query: 321 VHERDQYMSSTLLKVAT-EHSSVVAVVGKGHLQGIKNYWKQPV---PVHDLMTIPSPK 374
+ ERD Y++ LL++A + ++AV+G GH QG++ Y K P P+ L +P +
Sbjct: 242 IDERDAYIAGNLLRLANGGNKKIIAVLGAGHKQGVEKYLKDPKSLPPISSLTELPQKR 299
>gi|324506639|gb|ADY42832.1| TraB domain-containing protein [Ascaris suum]
Length = 505
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 134/267 (50%), Gaps = 37/267 (13%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTV 195
VYL+GTAH S +S ++V I+ +P +V +ELC SR+S+L+ +NL + +
Sbjct: 215 VYLIGTAHFSPDSQKDVLTTIENTQPDMVMVELCPSRISILSMDENTLLHEAKNLNLEKI 274
Query: 196 GEMVDMWKKKHNTFGILYSWFL---AKVASHLEIFPGSEFRVAFEEAMKYG-GKVILGDR 251
+ K+ GIL+ L A + L + PG EFR A AM K+ILGDR
Sbjct: 275 ---ISTIKQSGAVQGILHVLLLSMSAHITRELGMAPGGEFRAAHRGAMNVKLCKLILGDR 331
Query: 252 PVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSK 311
P+ +TL+R + + K++L Y L + E++ R K DML +++EM+
Sbjct: 332 PIHVTLQRALGSLSFYQKLRLFYHILLSHKSSITQEEVERCKKS----DMLEELLKEMAG 387
Query: 312 AFPTLMETLVHERDQYMSSTL-----------------LKVATEHSSVVAVVGKGHLQGI 354
FP L + V ERD YM++TL A + SVVAVVG GH+ GI
Sbjct: 388 EFPLLSKIFVEERDLYMTNTLHTLLRKSTYDKRVAWSKTDAAWQPVSVVAVVGIGHVPGI 447
Query: 355 KNYWKQPVPVHDLMTIPSPKPAVSALK 381
W + + V +L+ IP P + ++
Sbjct: 448 VANWNKSIDVVNLLCIPQPSRSTRIIR 474
>gi|170571703|ref|XP_001891831.1| TraB family protein [Brugia malayi]
gi|158603447|gb|EDP39370.1| TraB family protein [Brugia malayi]
Length = 389
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 35/311 (11%)
Query: 113 VPEETKKVLPEELPRSVVILTCDST---AEGGTCDVYLVGTAHVSKESCREVEAIIDFLK 169
+P ET VL P + + + D VYL+GTAH S +S ++V I +
Sbjct: 64 LPNETVTVLNYPFPPTAIPIGDDENEFRKSLADAKVYLIGTAHFSPDSQQDVLKTIANTQ 123
Query: 170 PQVVFLELCSSRVSMLTP------QNLKVPTVGEMVDMWKKKHNTFGILYSWFL---AKV 220
P +V +ELC SR+S+L+ + K ++++ K+ GIL+ L A +
Sbjct: 124 PDMVMVELCPSRISILSMDEDTLLEEAKNLNFDKVINTVKQSGAVQGILHILLLSMSAHM 183
Query: 221 ASHLEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQ 279
L + PG EFR A + AM K+ILGDRP+ +T++R + + K++L Y +
Sbjct: 184 TKTLGMAPGGEFRAAHKGAMNVKMCKLILGDRPIHVTVQRALSSLNFFQKLRLFYHIVLS 243
Query: 280 AFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSS---TLLK-- 334
+ E++ R K DML ++++M+ FP L + V ERD YM++ TLLK
Sbjct: 244 HKTTITQEEVERCKKS----DMLEELLKQMAGEFPLLSKIFVEERDLYMTNALHTLLKKS 299
Query: 335 ------------VATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKV 382
VA + SVVAVVG GH+ GI + W + + V DL+ IP P +++
Sbjct: 300 TFDKRVAWSKTDVAWQPISVVAVVGMGHVPGIISNWNKRIDVGDLLIIPQPTHTEKFIRL 359
Query: 383 -LSSLGVAVAG 392
L ++ + V G
Sbjct: 360 TLKAMIIGVVG 370
>gi|402594721|gb|EJW88647.1| hypothetical protein WUBG_00441 [Wuchereria bancrofti]
Length = 464
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 156/314 (49%), Gaps = 41/314 (13%)
Query: 113 VPEETKKVLPEELPRSVVILTCDST---AEGGTCDVYLVGTAHVSKESCREVEAIIDFLK 169
+P+ET VL P + + + D VYL+GTAH S +S ++V I +
Sbjct: 139 LPKETVTVLNYPFPPTAIPVGDDENEFRKSLADAKVYLIGTAHFSPDSQQDVLKTIANTQ 198
Query: 170 PQVVFLELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFL--- 217
P +V +ELC SR+S+L+ +NL V ++ K+ GIL+ L
Sbjct: 199 PDMVMVELCPSRISILSMDEDTLLEEAKNLNFDKV---INTIKQSGAVQGILHVLLLSMS 255
Query: 218 AKVASHLEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSF 276
A + L + PG EFR A + AM K+ILGDRP+ +T++R + + K++L Y
Sbjct: 256 AHMTKTLGMAPGGEFRAAHKGAMNVKMCKLILGDRPIHVTVQRALSSLNFFQKLRLFYHI 315
Query: 277 LFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSS---TLL 333
+ + E++ R K DML ++++M+ FP L + V ERD YM++ TLL
Sbjct: 316 VLSHKTTITQEEVERCKKS----DMLEELLKQMAGEFPLLSKIFVEERDLYMTNALHTLL 371
Query: 334 KVAT--------------EHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSA 379
K +T + SVVAVVG GH+ GI + W + + V DL+ IP P
Sbjct: 372 KKSTFDKRVAWSKTDAAWQPISVVAVVGMGHVPGIISNWNKRIDVGDLLIIPQPTHTEKF 431
Query: 380 LKV-LSSLGVAVAG 392
+++ L ++ + V G
Sbjct: 432 IRLTLKAMIIGVVG 445
>gi|73668516|ref|YP_304531.1| pheromone shutdown protein [Methanosarcina barkeri str. Fusaro]
gi|72395678|gb|AAZ69951.1| pheromone shutdown protein [Methanosarcina barkeri str. Fusaro]
Length = 517
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 156/299 (52%), Gaps = 24/299 (8%)
Query: 117 TKKVLPEELPRSVVILTCDST--------AEGGTCDVYLVGTAHVSKESCREVEAIIDFL 168
+ +++ E +P S ++ S+ AE + L+GTAHVS++S EV+A I L
Sbjct: 88 SSEIIAESIPDSASEVSIPSSSQFSDAHQAEYQPSKIVLIGTAHVSEKSVAEVKAAIRDL 147
Query: 169 KPQVVFLELCSSRVSML--TPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEI 226
KP +V +ELC R L Q +VP + +++ K + L ++ K+ + +
Sbjct: 148 KPDIVAVELCRGRYDSLKGNVQEKQVP-IKDILSEGKVNYYVIHWLLAYVQKKIGDDMGV 206
Query: 227 FPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSA 286
PG+E A EEA G KV L DR +Q+TL+R W KM K+K++ S L +
Sbjct: 207 RPGAEMLSAIEEAESIGAKVALIDRDIQVTLQRFWGKMKFLEKVKMIGSLLGGLIGIGKG 266
Query: 287 EDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVAT-EHSSVVAV 345
+++ + ++ + D++T ++ E+ PT E L+ ERD Y++ ++L VA + +VV V
Sbjct: 267 TEID--IDKITETDVVTGLVNELRDFAPTAAEVLIDERDAYLAGSILNVAAGGNKTVVVV 324
Query: 346 VGKGHLQGIKNYWKQP--VP-VHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIISGIYI 401
+G GH G+ Y K P VP + +LM +P + + + V A VA+I G ++
Sbjct: 325 IGAGHKPGVTKYLKNPKSVPSLSNLMQVPKKRIGLGKI-------VGFAFVAVIVGFFL 376
>gi|198428315|ref|XP_002127292.1| PREDICTED: similar to TraB domain containing [Ciona intestinalis]
Length = 386
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 142/276 (51%), Gaps = 30/276 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK- 203
VYLVGTAH S ESC +V +I ++P V +ELCSSRV +L + + E M +
Sbjct: 97 VYLVGTAHFSHESCDDVRKVISMVQPDAVVVELCSSRVQVLAYDEDYLTKISEESAMERL 156
Query: 204 ----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVAFEEA-MKYGGKVILGDRPVQ 254
K+ L + + +++SH L + PG EFR A E + G +++LGDRP++
Sbjct: 157 SKCIKQKGLISGLVLYMMLQMSSHITKQLGMAPGGEFRAALSEVKLVPGCQLLLGDRPIE 216
Query: 255 ITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFP 314
IT++R + +W KIK + L Q SAED+ + LKE DM ++ EM FP
Sbjct: 217 ITMQRMLASLSIWQKIKFAF-LLLQELKPISAEDVEK-LKER---DMFEQLLSEMVVEFP 271
Query: 315 TLMETLVHERDQYMSSTLLKV----------ATEHSSVVAVVGKGHLQGIKNYWKQPV-- 362
+ LV ERD +++ L K +T + +V VVG GH GI+ +++ +
Sbjct: 272 HMANALVAERDIFLTGYLQKTMKMGVTLPDDSTHPAVIVGVVGIGHTGGIQKRFQEEITE 331
Query: 363 -PVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIIS 397
+ ++ IP P LK ++ G AV GV + S
Sbjct: 332 EQMKEIQKIPKPSKVKQVLK-FAAKG-AVLGVVVYS 365
>gi|406878530|gb|EKD27412.1| hypothetical protein ACD_79C00730G0001, partial [uncultured
bacterium]
Length = 279
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 131/249 (52%), Gaps = 5/249 (2%)
Query: 134 CDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML-TPQNLKV 192
C + G +YLVGTAHVSK+S +V+ I+ +KP + +ELC +R L P + K
Sbjct: 13 CVREVKLGDRIIYLVGTAHVSKQSVADVKKTIEIVKPDSICVELCEARYKTLKNPDHWKN 72
Query: 193 PTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRP 252
+ +++ K ++ S F K+ L++ PG+E + + G ++L DR
Sbjct: 73 TDIFKVIKEGKSFFLLAQLIMSSFYKKIGEKLDVTPGAEMMEGIRLSEETGTNLVLADRD 132
Query: 253 VQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKA 312
VQ+TL+R W + W K+ +L S + F+ D + M++ M +VD L +I+E ++
Sbjct: 133 VQVTLKRLWGNLSFWRKM-MLMSQILSGMFVTEEVDKD-MIENMKEVDQLEAIIEEFAQN 190
Query: 313 FPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS 372
P++ TL+ ERD Y++ + + + VVAVVG GHL GI + + +L +P
Sbjct: 191 MPSVKATLIDERDIYLAQKIKN--AKGNKVVAVVGAGHLAGIIKQINEDYSLDELEKLPG 248
Query: 373 PKPAVSALK 381
P +LK
Sbjct: 249 PGWFSESLK 257
>gi|440795372|gb|ELR16496.1| TraB subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 472
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 129/262 (49%), Gaps = 68/262 (25%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
ELPRSV+ L + GG DV+L+G+AHVS+ S + D +P VF+ELC SR
Sbjct: 70 ELPRSVIHL---KSRNGG--DVFLIGSAHVSQAS------VDDVTQPTTVFVELCPSRAG 118
Query: 184 ML--------------TPQNLKVPTVG--------------------------------- 196
+L T Q + P G
Sbjct: 119 ILFAPQQQPAPPPTADTIQQQQSPADGAREQQTESQQTTNAPASSPIVAATVVQAEKAPS 178
Query: 197 ------EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGD 250
E++ K+ N ++ S +V ++++ PGSEFR A +E MKYG +++LGD
Sbjct: 179 TMSQISELLRRRKEGANILHLIISMVFERVTKNIKVMPGSEFRAAAQEGMKYGARIVLGD 238
Query: 251 RPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMS 310
RPV+ITL+RTW + +W K+KLLY L ED+ R M + D++T +++E+S
Sbjct: 239 RPVEITLKRTWGNLSVWEKLKLLYFVLMDTSLDIKEEDIKR----MKNSDIITEMVKELS 294
Query: 311 KAFPTLMETLVHERDQYMSSTL 332
FP+L+ L+ ++DQ+++ L
Sbjct: 295 TEFPSLVGPLITKQDQFLACKL 316
>gi|91093675|ref|XP_969585.1| PREDICTED: similar to AGAP004340-PA [Tribolium castaneum]
gi|270008075|gb|EFA04523.1| hypothetical protein TcasGA2_TC016318 [Tribolium castaneum]
Length = 380
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 45/309 (14%)
Query: 90 IVSLGDEVRDESSDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVG 149
I+S+GD +D+ +NG ++ + LP +V +L ++T VYLVG
Sbjct: 33 ILSIGD------TDQSSSNGG-----KSDEDFDNNLPETVTLLKHEATG----AKVYLVG 77
Query: 150 TAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKHNT- 208
TAH S ES +V +I + P V LELC+SR ++L+ + + +D+ K +N
Sbjct: 78 TAHFSNESKEDVIKVIRNILPHAVVLELCASRTNILSLDEKTILEEAKNIDLQKIVNNIK 137
Query: 209 -----FGILYSWFL---AKVASHLEIFPGSEFRVAFEEAMKY-GGKVILGDRPVQITLRR 259
GI+Y L A + L + PG EFRVA++EA K +V+LGDRP+ ITL R
Sbjct: 138 SSGLYNGIMYILLLNMSAHITKELGMAPGGEFRVAYQEAEKIPNCEVLLGDRPLGITLHR 197
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
K+ + +KL + L + S ED+ + K DML ++ E++ +P +
Sbjct: 198 ALSKLTWFQTVKLAWHLLTSKEKV-SIEDIEKCKKR----DMLEQLLTELAGEYPAFRDV 252
Query: 320 LVHERDQYMSSTLLKVAT-------------EHSSVVAVVGKGHLQGIKNYW-KQPVP-V 364
++ERD Y++ +L AT E +V VVG GH+ GI W K P +
Sbjct: 253 FLNERDIYLTHSLQAAATAACKKNRAKEGGDEPIRIVGVVGIGHVPGITKLWPKDQKPFI 312
Query: 365 HDLMTIPSP 373
+++ +P P
Sbjct: 313 AEILQVPPP 321
>gi|158522695|ref|YP_001530565.1| TraB family protein [Desulfococcus oleovorans Hxd3]
gi|158511521|gb|ABW68488.1| TraB family protein [Desulfococcus oleovorans Hxd3]
Length = 387
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 128/235 (54%), Gaps = 7/235 (2%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMV 199
G ++ LVGTAHVS++S +V +I+ +P V +ELC R ++ ++ + + ++V
Sbjct: 13 GDKEILLVGTAHVSRQSAEQVTQVIEAEQPDTVCVELCRPRFEAVRNREHWRQMDILKVV 72
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K +L + F K+A I PG + A E A K G K+ L DR ++ TL R
Sbjct: 73 RDKKAFMLLANLLLAAFQKKIAEKFGIAPGQDMISAIETAEKIGAKIHLADREIRATLAR 132
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMSKAFPTLME 318
W M LW K KLL+ + L A++++ ++++ DML +V+ E+ + P L +
Sbjct: 133 AWRSMGLWGKSKLLFQLVGS---LAGADEISEEEIEKLKQEDMLHMVLAELEASHPMLRK 189
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
++ ERDQY++ ++ + +VAVVG GH+ GIK YW + + L T+P P
Sbjct: 190 IIIDERDQYLAHSIYNAPGK--KIVAVVGAGHVAGIKRYWNTAIDIQALETVPPP 242
>gi|393907573|gb|EJD74699.1| hypothetical protein LOAG_18022 [Loa loa]
Length = 337
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 35/311 (11%)
Query: 113 VPEETKKVLPEELPRSVVILTCDST---AEGGTCDVYLVGTAHVSKESCREVEAIIDFLK 169
+P+ET VL P + + + D VYL+GTAH S +S ++V I +
Sbjct: 12 LPKETVTVLNYPFPPTAIPVGDDENEFRKSLADAKVYLIGTAHFSPDSQQDVLKTIANTQ 71
Query: 170 PQVVFLELCSSRVSMLTP------QNLKVPTVGEMVDMWKKKHNTFGILYSWFL---AKV 220
P +V +ELC SR+S+L+ + K ++++ K+ GIL+ L A +
Sbjct: 72 PDMVMVELCPSRISILSMDEDTLLEEAKNLNFDKIINTIKQSGAIQGILHVLLLSMSAHM 131
Query: 221 ASHLEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQ 279
L + PG EFR A + AM K+ILGDRP+ +T++R + + K++L Y +
Sbjct: 132 TKTLGMAPGGEFRAAHKGAMNIRMCKLILGDRPIHVTVQRALSSLSFFQKLRLFYHIVLS 191
Query: 280 AFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSS---TLLKVA 336
+ E++ R K DML ++++M+ FP L + V ERD YM++ TLLK +
Sbjct: 192 HKTTITQEEVERCKKS----DMLEELLKQMAGEFPLLSKIFVEERDLYMTNALHTLLKKS 247
Query: 337 T--------------EHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKV 382
T + SVVAVVG GH+ GI + W + + V DL+ IP P +++
Sbjct: 248 TFDKRVAWSKTDAAWQPISVVAVVGMGHVPGIISNWNKRIDVGDLLIIPQPTHTEKFIRL 307
Query: 383 -LSSLGVAVAG 392
L ++ + V G
Sbjct: 308 TLKAMIIGVMG 318
>gi|327400490|ref|YP_004341329.1| TraB family protein [Archaeoglobus veneficus SNP6]
gi|327315998|gb|AEA46614.1| TraB family protein [Archaeoglobus veneficus SNP6]
Length = 403
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 132/245 (53%), Gaps = 6/245 (2%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+ +VGTAHVS +S ++VE I+ KPQ V +ELC R L + +P V +++ +
Sbjct: 16 IIIVGTAHVSPKSIKDVEETIEREKPQAVAVELCMRRYLALKGEKQDIPVV-DIIKRGEA 74
Query: 205 KHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKM 264
F +L S+F K+ + PG E A ++A + G V+L DR + IT RR W +
Sbjct: 75 HLLLFQLLLSYFQRKIGEEYGVKPGDEMLAAIKKAEEVGADVLLIDRDIAITFRRFWNSL 134
Query: 265 PLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHER 324
K+K++Y+ L + F D++ MLKE D+L ++++E P+ +TL+ ER
Sbjct: 135 SFVEKLKIVYNLL-KGLFSKDDVDVDEMLKE----DVLEVMVKEFRDIAPSAAKTLIDER 189
Query: 325 DQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLS 384
D +M++ L+ ++ +VAVVG GH +G++ + P + + + K ++ + +L
Sbjct: 190 DAFMAANLIAALKKYDKIVAVVGAGHKKGLERFISNPASIPPIEKLLEVKKGINVMNILG 249
Query: 385 SLGVA 389
VA
Sbjct: 250 YTIVA 254
>gi|268536814|ref|XP_002633542.1| Hypothetical protein CBG05409 [Caenorhabditis briggsae]
Length = 453
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 132/280 (47%), Gaps = 44/280 (15%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPT------VGEM 198
VYLVGTAH SKES +V I ++P V LELC SR+S+++ ++ + ++
Sbjct: 158 VYLVGTAHFSKESQEDVSNTIRAVQPDFVMLELCPSRISIISMDEARLLSEAKDLNTQKI 217
Query: 199 VDMWKKKHNTFGILYSWFL---AKVASHLEIFPGSEFRVAFEEAMKY-GGKVILGDRPVQ 254
+ K+ GIL+ L A L + PG EFR A A+ +V+LGDRP+Q
Sbjct: 218 MQTMKQNGAIQGILHVLLLSMSAHATRELAMAPGGEFRAAHRAAVATENCRVVLGDRPIQ 277
Query: 255 ITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFP 314
+TL+R + +W KI+ F +AE + R ++ D+L ++ EM+ FP
Sbjct: 278 VTLQRALASLSVWQKIRFFLHVAFSHREKITAEQVERCKQK----DLLEQLLAEMADDFP 333
Query: 315 TLMETLVHERDQYMSSTL----LKVATEHSS---------------VVAVVGKGHLQGIK 355
L + V ERD YM+ L L+ A E + +V+VVG GH GI
Sbjct: 334 QLSQIFVEERDAYMTHALHMLVLRNAIEKRAQWLRGTTGQPYQPLTIVSVVGIGHTPGIV 393
Query: 356 NYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAI 395
N W + LM +P P SLG V G +
Sbjct: 394 NKWNSNIDFDPLMVVPPP-----------SLGTIVFGTTV 422
>gi|317051919|ref|YP_004113035.1| TraB family protein [Desulfurispirillum indicum S5]
gi|316947003|gb|ADU66479.1| TraB family protein [Desulfurispirillum indicum S5]
Length = 411
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 139/253 (54%), Gaps = 13/253 (5%)
Query: 137 TAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN-LKVPTV 195
T +G T ++L+GTAHVS++S V A+I +KP V +ELC SR L ++ + +
Sbjct: 31 TYQGKT--LFLLGTAHVSQQSVDTVRAVIAAIKPDTVAVELCPSRYRALFEEDHWQNMNI 88
Query: 196 GEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQI 255
+++ K ++ S F ++ + L + PG E A A + IL DR VQ+
Sbjct: 89 FQVLREGKATVLLANLILSSFQKRMGAQLGVKPGQEMVEAIRSAQDNDARYILADREVQL 148
Query: 256 TLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMSKAFP 314
TL+R W +W ++KL+ + + F + E+L R L++M + DML+ +++E ++ FP
Sbjct: 149 TLKRAWGSAGIWGRMKLISTLIASLF---AQEELTERDLEKMRNQDMLSEMLEEFARHFP 205
Query: 315 TLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK----QPVPVHDLMTI 370
L TL+ ERDQY++ + V S ++AVVG GH QG++ + + + + L T+
Sbjct: 206 RLKTTLIDERDQYLAKKV--VEAPGSVILAVVGAGHRQGMRRLIESQQVEELSLSQLNTV 263
Query: 371 PSPKPAVSALKVL 383
P P P ++K L
Sbjct: 264 PKPSPVWKSIKYL 276
>gi|315641656|ref|ZP_07896719.1| pheromone shutdown protein TraB [Enterococcus italicus DSM 15952]
gi|315482584|gb|EFU73116.1| pheromone shutdown protein TraB [Enterococcus italicus DSM 15952]
Length = 385
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 134/249 (53%), Gaps = 17/249 (6%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+GTAHVSKES +EV+A ID ++P+ + +EL R T QN ++V + K
Sbjct: 9 NITLIGTAHVSKESVKEVQATIDAIQPKYIGIELDKERFE--TMQNNNKWENTDIVKVIK 66
Query: 204 KKHNT---FGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+K I+ + F + A++ E PG+EF++A E+A ++ ++ L DR + ITL R
Sbjct: 67 EKKVAPLLMQIILAAFQKRFAANTESAPGAEFKMAIEKAHEHKAELKLLDRNINITLNRI 126
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLN---RMLKEMDDVDMLTLVIQEMSKAFPTLM 317
W + W K KL+ +FLF + E N L+E+ + D++ + + P +
Sbjct: 127 WRSLTFWQKAKLIVAFLF-----GNGEQANLDENKLQEIMNEDIIETTFSSLREELPVIH 181
Query: 318 ETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVH---DLMTIPSPK 374
+TL+ ER++YM + + + T+ +V V+GKGHL G+ KQ H +L TIP
Sbjct: 182 DTLILERNEYMVNNIFDIHTD-EKIVVVIGKGHLNGMAELIKQNKNSHRNQELDTIPKKT 240
Query: 375 PAVSALKVL 383
L+ L
Sbjct: 241 MGSKILEYL 249
>gi|298528724|ref|ZP_07016128.1| TraB family protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298512376|gb|EFI36278.1| TraB family protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 392
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 131/243 (53%), Gaps = 21/243 (8%)
Query: 139 EGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEM 198
+ G VYL+GTAHVS++S +V+ ++ ++P + +ELC SR Q L P V +
Sbjct: 16 QAGEKTVYLLGTAHVSQQSVDDVQQAVEQIRPDTICVELCPSRY-----QTLVHPDVWKN 70
Query: 199 VDMWK--KKHNTFGIL----YSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRP 252
D+++ K++ +L S F K+ L + PG+E +A + G ++L DR
Sbjct: 71 TDIYQVIKENKALFLLAQLGLSAFYRKIGQKLGVKPGAEMLEGVRQAERTGADLVLADRD 130
Query: 253 VQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPS---AEDLNRMLKEMDDVDMLTLVIQEM 309
V ITL+R W + +W K KLL L F P ED+ ++ K+ D L +V+ E
Sbjct: 131 VNITLKRVWGSLSMWGKFKLLMQLLAGMVF-PGDIKKEDIEKLKKK----DQLQVVMDEF 185
Query: 310 SKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMT 369
S++FP + ++L+ ERDQY++ + + + +++ +VG GH+ GI Y Q + + L
Sbjct: 186 SRSFPQIQKSLIDERDQYLAHKIAE--SPGKTILVIVGAGHIPGITTYLDQDIDIGPLTE 243
Query: 370 IPS 372
+P
Sbjct: 244 MPG 246
>gi|126178688|ref|YP_001046653.1| TraB family protein [Methanoculleus marisnigri JR1]
gi|125861482|gb|ABN56671.1| TraB family protein [Methanoculleus marisnigri JR1]
Length = 398
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 21/242 (8%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
++ LVGTAHVS++S EV + I+ +P +V +EL R L + + P+VGE++
Sbjct: 2 TEIRLVGTAHVSRKSVEEVRSAIEEFQPDIVGVELDRGRFVSLREEAAE-PSVGEIL--- 57
Query: 203 KKKHNTFG-ILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
K FG +L W L ++ + + PG+E A EEA + V L DR ++ITL
Sbjct: 58 --KGGNFGQLLVQWVLTYIQQRIGAETGVKPGAEMLAAVEEAEAHQKPVALIDRDIRITL 115
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLM 317
R W +M +W KIKL+ + ++ L S E + E D D+++ ++E K P
Sbjct: 116 ARFWGRMGIWEKIKLIGALIYS---LVSVEGQKIDVDEFTDQDVVSAAMEEFRKFSPRGA 172
Query: 318 ETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAV 377
+ L+ ERD Y++ +L + + V+AVVG GH++G++ Y P T+P P PA+
Sbjct: 173 QALIDERDAYLAHQILMLGGRYERVLAVVGAGHIRGVQRYLDAP------ETLP-PLPAL 225
Query: 378 SA 379
+A
Sbjct: 226 TA 227
>gi|397780239|ref|YP_006544712.1| hypothetical protein BN140_1073 [Methanoculleus bourgensis MS2]
gi|396938741|emb|CCJ35996.1| putative protein MJ1365 [Methanoculleus bourgensis MS2]
Length = 398
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 142/273 (52%), Gaps = 24/273 (8%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
++ LVGTAHVS++S +V + I+ +P +V +EL R LT Q PTV E++
Sbjct: 2 TEIRLVGTAHVSQKSVEDVRSAIEEFQPDIVGVELDRGRFISLT-QETPDPTVTEIL--- 57
Query: 203 KKKHNTFG-ILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
K FG +L W LA ++ + + PG+E A EEA + V L DR ++ITL
Sbjct: 58 --KGGNFGRLLVQWVLAFIQQRIGAETGVKPGAEMLAAIEEAEAHQRPVALIDRDIRITL 115
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLM 317
R W KM +W KIKL+ + ++ L E + E + D+++ ++E K P
Sbjct: 116 SRFWGKMRIWEKIKLIGALIYS---LVGVEGQEIDVDEFTNQDVVSAAMEEFRKFSPRGA 172
Query: 318 ETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPV-------HDLMTI 370
+ L+ ERD Y++ LL + + + V+AVVG GH+QG++ Y P + D+ +
Sbjct: 173 QALIDERDAYLAHQLLMLGSRYERVLAVVGAGHIQGVQRYLDAPETLPPLQSLTADVKGL 232
Query: 371 PSPKPAVSALKVLSSLGVAVAGVAIISGIYINC 403
P K + + +L +L +A G SG+ ++
Sbjct: 233 PWAKIIGAGVTLLFALLIAAIG---FSGVGLDV 262
>gi|307211712|gb|EFN87713.1| TraB domain-containing protein [Harpegnathos saltator]
Length = 437
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 145/293 (49%), Gaps = 32/293 (10%)
Query: 111 VPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKP 170
+P +E + + LP +V +LT T +GG +YL+GTAH S ES +V II ++P
Sbjct: 113 IPGIKEYDPTIDDRLPETVTLLT---TPDGGK--LYLIGTAHFSIESQNDVSKIIQAVQP 167
Query: 171 QVVFLELCSSRVSMLTPQNLKVPTVGE------MVDMWKKKHNTFGILYSWFL---AKVA 221
+V +ELC +RV +L + + ++D+ KK+ G+L+ L A VA
Sbjct: 168 HIVVVELCKARVGILQLDEEAIFRCAKDLSYQCIMDILKKEGVYNGLLHVLLLRMAAHVA 227
Query: 222 SHLEIFPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQA 280
L + PG EFR AFEEA K +I + DRP+ IT+ R + W IKL + F
Sbjct: 228 KELGMPPGGEFRRAFEEARKVPNCIIHMADRPIHITMERALRSLSWWQTIKLGWHLAFMK 287
Query: 281 FFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA---- 336
P ++ + K+ ML +I M FP L E + ERD Y++ + L++A
Sbjct: 288 --RPITQEDVELCKQR---SMLDEMIASMKGEFPVLGEVFIKERDIYLTYS-LQIACMPQ 341
Query: 337 -TEHS----SVVAVVGKGHLQGIKNYWK--QPVPVHDLMTIPSPKPAVSALKV 382
T H VV +VG GH GI W QP + ++ +P P + LK+
Sbjct: 342 FTPHGIKPMRVVGIVGLGHTPGIIENWGKVQPTDISPILKVPPPSMSSKILKL 394
>gi|268323289|emb|CBH36877.1| conserved hypothetical membrane protein, TraB family [uncultured
archaeon]
Length = 432
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 150/303 (49%), Gaps = 47/303 (15%)
Query: 135 DSTAEGGTCD-VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQ--NLK 191
++ A G + D + LVGT H+ ++S +EVEA+ID P VV +ELC +R L + N
Sbjct: 3 ENDATGASTDNIILVGTGHILEKSVKEVEAVIDRENPDVVAVELCEARYKSLKGEVENFS 62
Query: 192 VPTVGEMVDMWKKKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVI 247
V + F IL W LA K+ L I PG++ A +A + G K+
Sbjct: 63 VKDT-------LSTGSPFLILTHWLLAYVQRKMGDELGIEPGADMMAAIGKAEEKGCKIA 115
Query: 248 LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLP-----------------SAEDLN 290
L DRP+QIT++R W+KM + K+K+++S LF + DLN
Sbjct: 116 LIDRPIQITMQRFWKKMKFFEKLKMVFSMLFAITNIRGDGKGGEGKEGAQKLQIGGMDLN 175
Query: 291 RM--LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSS------- 341
L + D D++T +++E+ + P L+ ERD Y++ +LL++ S+
Sbjct: 176 DGIDLDRITDEDVVTQLMEELREFSPGAATALLDERDAYIAGSLLELQHHRSTDNLEQMK 235
Query: 342 VVAVVGKGHLQGIKNYWKQPV---PVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAI-IS 397
VAVVG GH+ GIKN + P P +L +P + + K L LG+ VA V + I+
Sbjct: 236 TVAVVGAGHVAGIKNLLRHPELIPPKAELCALPKKRFGI---KHLLGLGIGVALVVVFIA 292
Query: 398 GIY 400
Y
Sbjct: 293 AFY 295
>gi|380020490|ref|XP_003694116.1| PREDICTED: traB domain-containing protein-like [Apis florea]
Length = 426
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 166/329 (50%), Gaps = 35/329 (10%)
Query: 93 LGDEVR----DESSDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLV 148
+G ++R +E+S++D N A + E + E+LP +V +LT T EGG +YLV
Sbjct: 82 IGHQLRFSAHNENSNKD-INIATSIQPEYDASIDEKLPETVKLLT---TPEGG--KLYLV 135
Query: 149 GTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTVGEMV 199
GTAH S ES +V II ++P +V +ELC +R+ + +L + + E++
Sbjct: 136 GTAHFSIESQNDVATIIQAVQPHIVVVELCKARIGAININEETLYRDATDLSLKNLTEIL 195
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLR 258
+ I+ LA + L + PG EFR AF+EA K +I L DR + +T++
Sbjct: 196 RHHGAYNGLLHIMLYSILAHIVKQLGMAPGGEFRTAFKEAKKVPNCIIQLADRSIDVTIQ 255
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R ++ W IKL + F+ + S +D+ R ++ +L +I + + +P + +
Sbjct: 256 RALREVSWWEIIKLTW-FVLRLDSRISKQDIERYKRKC----VLEQMISTLREEYPAIEK 310
Query: 319 TLVHERDQYMSSTL-LKVATEHSS-------VVAVVGKGHLQGIKNYWKQPVPVHDLMTI 370
T V ERD Y++ L + AT+++S VV VVG GH+ GI W + V D+ I
Sbjct: 311 TFVTERDIYLTYHLQMATATQYTSAGLISPRVVGVVGIGHINGIVENWGK-VKASDIWPI 369
Query: 371 PSPKPAVSALKVLS-SLGVAVAGVAIISG 398
P + K+L ++ ++ G I G
Sbjct: 370 IRIPPQSLSTKILKFTIKASLLGATIYMG 398
>gi|308273599|emb|CBX30201.1| hypothetical protein N47_D30100 [uncultured Desulfobacterium sp.]
Length = 388
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 136/272 (50%), Gaps = 26/272 (9%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML----TPQNLKVPTVGEMV 199
++ L+GTAHVSK+S V ++I+ KP V +ELC SR + + QN + V
Sbjct: 18 EIVLLGTAHVSKDSVELVNSVINEEKPDTVCVELCESRYQAIEKKDSWQNTNIVKV---- 73
Query: 200 DMWKKKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQI 255
K+ TF +L + LA ++A +I PG E A G K+ DR +++
Sbjct: 74 ---IKEKKTFLLLSNLILASFQKRIAKKFDIVPGQEMIEAINAGKSIGAKIHTADRDIRV 130
Query: 256 TLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFP 314
TL R W + W K+KLL+ + L D+ +++M D+L ++ E+ ++ P
Sbjct: 131 TLSRVWNTIGFWGKVKLLFQLILS---LGDVGDITENDIEKMKQEDVLETLLAEVGQSLP 187
Query: 315 TLMETLVHERDQYMSSTLLKVATE-HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
L + L+ ERD Y++ K+ T + +VAVVG GH++GIK YW + + L T+P
Sbjct: 188 VLKKILIDERDMYLAQ---KIKTAPGNKIVAVVGAGHVKGIKAYWDDTIDLTSLDTVPPK 244
Query: 374 KPAVSALKVLSSLGVAVAGVAIISGIYINCKK 405
+A + + + G+ + I G Y K
Sbjct: 245 SSMSNAFQWIFTSGII---ILFIYGFYYGGTK 273
>gi|332019036|gb|EGI59570.1| TraB domain-containing protein [Acromyrmex echinatior]
Length = 450
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 177/387 (45%), Gaps = 49/387 (12%)
Query: 34 RGPTSLPLSLTKQFSPLLSTRITSFATANDPNFPKMDPNPPESGEEFVHVDPLSESIVSL 93
RG T Q S LS T ND N K + S E + +D S
Sbjct: 62 RGITQSDSQSATQSSCTLSIVSTDDNRGNDDNKMK---STESSDNEMILIDEDSN----- 113
Query: 94 GDEVRDESSDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHV 153
++++ S+ T V E + E LP +V +LT T +GG +YLVGTAH
Sbjct: 114 ---IQNKGSNIGNT---VSELREYDPTIDERLPETVTLLT---TPDGGK--LYLVGTAHF 162
Query: 154 SKESCREVEAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTVGEMVDMWKK 204
S ES +V II ++P +V +ELC +RV +L +N+ T+ +D K+
Sbjct: 163 SVESQNDVSKIIQAVQPHIVAVELCRARVGILQLDEEILFGYAKNIDYKTI---MDTIKR 219
Query: 205 KHNTFGILYSWFL---AKVASHLEIFPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRRT 260
+ G+L+ L A VA L + PG EFR AFEEA K +I L DRP+ IT++R
Sbjct: 220 EGLYDGLLHILLLRMAAHVAKELGMPPGGEFRRAFEEAKKVPNCIIHLADRPINITMQRA 279
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
+ W IKL + + + ED+ + K+ ML +I M + FP L E
Sbjct: 280 IRSLSWWQTIKLGWKLAVMKDSI-TQEDV-ELCKQR---SMLDEIIANMKEKFPVLGEVF 334
Query: 321 VHERDQYMSSTL---------LKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
V ERD Y++++L + E + VV +VG GH GI W + P +
Sbjct: 335 VKERDIYLTNSLQLSCLPHCVFNHSYEPARVVGIVGLGHTPGIIENWGKVKPSDIPPIMR 394
Query: 372 SPKPAVSALKVLSSLGVAVAGVAIISG 398
P P++S + ++ +V GV I G
Sbjct: 395 IPPPSLSGKILKQTVKASVLGVVIYIG 421
>gi|268325877|emb|CBH39465.1| conserved hypothetical protein, TraB family [uncultured archaeon]
Length = 438
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 158/305 (51%), Gaps = 54/305 (17%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ LVGT H+ ++S REVE +ID KP VV +ELC++R L + +V V E++ K
Sbjct: 4 NIILVGTGHILEKSVREVEEVIDREKPDVVAVELCAARYDALQGKVEEVQ-VKEVLAGGK 62
Query: 204 KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
F ++ W LA K+ + L I PG++ A ++A ++G ++ L DRP+QIT++R
Sbjct: 63 P----FLMITHWLLAYVQRKMGNELGIEPGADMMAAIKKAEEFGCQIALVDRPIQITMQR 118
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLP-------------------SAEDLNRMLKEMDDVD 300
W+KM K+K+++S LF F + +++ + L + D D
Sbjct: 119 FWKKMKFLEKLKMVFSILFAIFHMGRGKDGDDDGKNELSLGGGFTSKGVAVDLDSITDED 178
Query: 301 MLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA----------------------TE 338
+++ +++E+ + P L+ ERD Y++ +LL+++ T
Sbjct: 179 VVSQLVEELREFSPGAATALLDERDAYIAGSLLEISQQLLVKEVPDASSDVSDQNASNTR 238
Query: 339 HSSVVAVVGKGHLQGIKNYWKQPVPV---HDLMTIPSPKPAVSALKVLSSLGVAVAGVAI 395
++VAVVG GH+ GIK + P + DL +IP+ + +S LK L +G+ +A V +
Sbjct: 239 EKTIVAVVGAGHVAGIKKLLRHPERIPSKEDLCSIPTKRFNLS-LKNLLVVGLGIALVLV 297
Query: 396 ISGIY 400
+ +
Sbjct: 298 LLAFF 302
>gi|333911315|ref|YP_004485048.1| TraB family protein [Methanotorris igneus Kol 5]
gi|333751904|gb|AEF96983.1| TraB family protein [Methanotorris igneus Kol 5]
Length = 388
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 128/227 (56%), Gaps = 21/227 (9%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
C++YL+GTAHVS+ES R+VE I + P VV +EL R + N + + D+
Sbjct: 13 CNIYLIGTAHVSEESVRKVEEAIININPDVVAVELDRERFLAIMGNNDNMDNI----DIK 68
Query: 203 KK-KHNTFGI-----LYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ K GI + S+F K+ L + PGSE + A E A+++ + L DR + IT
Sbjct: 69 RVIKEGRVGIFLLHMILSYFQKKIGEELGVKPGSEMKKAIEIAIQHQKPISLIDRQINIT 128
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAE-DL-NRMLKEM-DDVDMLTLVIQEMSKAF 313
L R KM L KI F + F + E D+ N+ + +M ++ D L L+++++S
Sbjct: 129 LTRLLNKMSLKEKINF-----FLSLFEENGEIDIDNKSINDMVNNADELVLLLKDIS--- 180
Query: 314 PTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
PT+ E LV ERD+YM+ L +++ + +VAVVG GH++GI NY K+
Sbjct: 181 PTIYEVLVDERDRYMAKNLYELSKGNEKIVAVVGAGHIRGIINYLKK 227
>gi|386000744|ref|YP_005919043.1| TraB family protein [Methanosaeta harundinacea 6Ac]
gi|357208800|gb|AET63420.1| TraB family protein [Methanosaeta harundinacea 6Ac]
Length = 411
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 148/278 (53%), Gaps = 27/278 (9%)
Query: 137 TAEGG-TCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTV 195
+A GG ++ +VGTAHVS++S +EV I+ L+P VV +ELC R L +
Sbjct: 17 SAPGGEKGEIVIVGTAHVSEKSVQEVRQAIEDLRPDVVAVELCRGRYRALRGEE------ 70
Query: 196 GEMVDMWKKKHNTFGILY----SWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVI 247
E ++ K+ + G LY WFLA K+ S L + PGSE A E A G +V
Sbjct: 71 -ETGEIQIKEILSGGKLYLLLVQWFLAYVQKKIGSDLGVKPGSEMIAAIEAAEAAGARVA 129
Query: 248 LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQ 307
L DR + +T++R W M K KL++S + AF D++++ +E D+++ +I+
Sbjct: 130 LVDRDIAVTIQRFWTSMSFLEKAKLVFSMIPAAFGKGEDIDIDKVTEE----DVVSAIIE 185
Query: 308 EMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP--VPVH 365
E + P E L+ ERD Y++ L+++A V+AVVG GH +GI Y P +P
Sbjct: 186 EFREVSPRAAEVLIDERDAYIARNLIRLA-RTGRVLAVVGAGHREGIARYLDHPERIPPM 244
Query: 366 DLMTIPSPKPAVSALKVLSSLGVAVA----GVAIISGI 399
+ M P+ + +SA KV +L + + G +I+GI
Sbjct: 245 EEMASPARRRRISAPKVFGALLMLLVLVTIGAVLIAGI 282
>gi|284161492|ref|YP_003400115.1| TraB family protein [Archaeoglobus profundus DSM 5631]
gi|284011489|gb|ADB57442.1| TraB family protein [Archaeoglobus profundus DSM 5631]
Length = 379
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 127/239 (53%), Gaps = 13/239 (5%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
+VY+VGTAHV +ES +V +I+ + P V +ELC R + L N++ ++ +++
Sbjct: 2 AEVYIVGTAHVLRESVEKVHKVIEEVNPDAVAVELCPRRYNALI-NNVQSISLSDVLKSG 60
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
I+ ++F K+ + PG E A ++A + G V+L DR + IT +R W+
Sbjct: 61 NISLALLQIVLAYFQRKIGEETGVRPGEEMLTAIKKARELGADVLLIDRDIGITFQRLWQ 120
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
KM + K+K ++ L F S ED+ + +D + I+E K P E L+
Sbjct: 121 KMSFFEKLKFGWNILKGLF---SKEDVEDVASNVDSL------IEEFRKISPKAGEVLID 171
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPV---PVHDLMTIPSPKPAVS 378
ERD YM+ +++V+ ++ +V VVG GH +GI+ Y K P P+ L+ + K ++S
Sbjct: 172 ERDAYMAYNIIRVSERYNKIVVVVGAGHKKGIEGYLKNPEKLPPIEKLLEVKKGKFSLS 230
>gi|116753634|ref|YP_842752.1| TraB family protein [Methanosaeta thermophila PT]
gi|116665085|gb|ABK14112.1| TraB family protein [Methanosaeta thermophila PT]
Length = 402
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 19/272 (6%)
Query: 139 EGGTCD----VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPT 194
EG + D + ++GTAHVS++S EV I+ +P +V +ELC R LT Q+
Sbjct: 6 EGSSTDARNEILVIGTAHVSEKSVAEVREAIEQTRPDIVAVELCQRRYLALTGQDRDEDI 65
Query: 195 -VGEMVDMWKKKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILG 249
V E++ + +L W LA ++ S + + PG+E A E A +V L
Sbjct: 66 KVSELL----SGGRIYLVLVQWLLAYIQRQIGSEMGVRPGAEMLAAIEAARVVNARVALV 121
Query: 250 DRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEM 309
DR + IT++R W M +W K+K+L+S + A EDL+ + + D D+++ ++ E
Sbjct: 122 DRDISITIQRFWSAMSIWEKLKMLWSLVVAALGFGK-EDLD--IDSVTDSDVVSQLMAEF 178
Query: 310 SKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMT 369
K P+ LV ERD Y++ L + + + V+AVVG GH +GI Y P + D
Sbjct: 179 RKIAPSAARALVDERDAYIARNLYDL-SRYGKVLAVVGAGHREGIMRYLSDPSRIPDTQI 237
Query: 370 IPSPKPAVSALKVLSSLGVAVAGVAIISGIYI 401
+P +L + G+ V + I++ +YI
Sbjct: 238 FDAPPEKRFSLG--KAFGIIVTLLIILTFVYI 267
>gi|158292057|ref|XP_562083.2| AGAP004340-PA [Anopheles gambiae str. PEST]
gi|157017252|gb|EAL40514.2| AGAP004340-PA [Anopheles gambiae str. PEST]
Length = 486
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 175/394 (44%), Gaps = 54/394 (13%)
Query: 38 SLPLSLTKQFSPLLSTRITSFATANDPNFPKMDPNPPESGEEFVHVDPLSESIVSLGDEV 97
SL LS + S ++ SF ++++ + + + P + + V++ S + E
Sbjct: 96 SLDLSAAGELSDTINNVTLSFVSSSEEDGEVLTASTPRAPDVSVNMSQSDTSTTTTQGE- 154
Query: 98 RDESSDRDETNGAVPVPEETKKVLP---------EELPRSVVILTC-DSTAEGGTCDVYL 147
+S D +PV + +P LP +V +LT D T VYL
Sbjct: 155 -KDSRDTTANVSQLPVESGSDSAIPLYATLEEFDRNLPETVTLLTKPDGTK------VYL 207
Query: 148 VGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP------QNLKVPTVGEMVDM 201
VGTAH S+ S R+V ++ ++P V+ LELC SRV +L + K V +M +
Sbjct: 208 VGTAHFSESSQRDVSLVMRNVRPHVLMLELCPSRVHILKYDEKTLLEEAKDMNVAKMRQI 267
Query: 202 WKKKHNTFGILYSWFL---AKVASHLEIFPGSEFRVAFEEAMKYGGKVI-LGDRPVQITL 257
+ GI Y L AK L + PG EFR A +EA + VI LGDR +++TL
Sbjct: 268 IRTNGMVNGIFYILLLNMNAKFTKKLGMAPGGEFRCAVKEAQQIPNCVIQLGDREIKVTL 327
Query: 258 RRTWEKMPLWHKIKLLYSFLF--QAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPT 315
R + LW IKLL LF + E R D+L ++ EM+ +P
Sbjct: 328 HRALRGLSLWQTIKLLPKLLFIDDDISIEEVEQCKRK-------DLLEEIMLEMAGEYPA 380
Query: 316 LMETLVHERDQYMSSTLLKVA----------TEHSSVVAVVGKGHLQGIKNYWKQPVPVH 365
+HERD Y+ +L A +E VV VVG GH GI +W + V +
Sbjct: 381 FGRVFIHERDLYLCHSLQLAARPQINPVDGRSEPIRVVGVVGIGHAAGIAKHWGK-VEIS 439
Query: 366 DLMTIPSPKPAVSALKVLSS------LGVAVAGV 393
++ +I + PA +++ LG+A GV
Sbjct: 440 NIESIITIPPASFGHRMVKYTVKYGLLGLAAYGV 473
>gi|312385019|gb|EFR29613.1| hypothetical protein AND_01281 [Anopheles darlingi]
Length = 509
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 148/294 (50%), Gaps = 35/294 (11%)
Query: 123 EELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV 182
+ LP +V +LT A+ VYLVGTAH S+ S R+V ++ ++P VV LELC SRV
Sbjct: 204 QHLPETVTVLTTPDGAK-----VYLVGTAHFSESSQRDVSLVMRNVQPNVVMLELCPSRV 258
Query: 183 SMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKY 242
+L ++ + + E +M K T I + + + + + PG EFR A EA +
Sbjct: 259 HIL--RHDEQTLLEEAKNMNLAKMRTI-IQTNGSINGLRKNYGMAPGGEFRCAVREAQRI 315
Query: 243 GGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDM 301
+I LGDR +++TL+R + +W +KL+ LF P E++ + K+ D+
Sbjct: 316 PNCIIQLGDRQIKVTLQRALRGLSVWQTLKLIPKLLFMDDITP--EEVEQCKKK----DL 369
Query: 302 LTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA--TEHSS-------VVAVVGKGHLQ 352
L ++ EM++ FP + ERD Y+ +L A +H+ VVAVVG GH
Sbjct: 370 LEEIMLEMAEEFPAFGRVFIEERDLYLCHSLQMAAMPIQHADGTLEPVRVVAVVGIGHAA 429
Query: 353 GIKNYWKQ--PVPVHDLMTIPSPKPAVSALKVL------SSLGVAVAGVAIISG 398
GI +W + +H + IP PA +VL LG+A G++ + G
Sbjct: 430 GIAKHWGKVSAESIHAIAHIP---PASLGHRVLKYSVKHGMLGLAAYGISGLRG 480
>gi|328784684|ref|XP_397164.4| PREDICTED: traB domain-containing protein-like [Apis mellifera]
Length = 426
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 165/329 (50%), Gaps = 35/329 (10%)
Query: 93 LGDEVR----DESSDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLV 148
+G ++R +E+S++D N A + E + E+LP +V +LT T EGG +YLV
Sbjct: 82 IGHQLRFSTHNENSNKD-INIAASIQPEYDASIDEKLPETVKLLT---TPEGG--KLYLV 135
Query: 149 GTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTVGEMV 199
GTAH S ES +V II ++P +V +ELC +R+ + +L + + E++
Sbjct: 136 GTAHFSIESQNDVATIIQAVQPHIVVVELCKARIGAININEETLYRDATDLSLKNLTEIL 195
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLR 258
+ I+ LA + L + PG EFR AF+EA K +I L DR + +T++
Sbjct: 196 RHHGAYNGLLHIMLYSILAHIVKQLGMAPGGEFRTAFKEAKKVPNCIIQLADRSIDVTIQ 255
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R ++ W IKL + F+ + S +D+ R ++ +L +I + + +P + +
Sbjct: 256 RALREVSWWEIIKLTW-FVLRLDSRISKQDIERYKRKC----VLEQMISTLREEYPAIEK 310
Query: 319 TLVHERDQYMSSTL-LKVATEHSS-------VVAVVGKGHLQGIKNYWKQPVPVHDLMTI 370
T V ERD Y++ L + A +++S VV VVG GH+ GI W + V D+ I
Sbjct: 311 TFVTERDIYLTYHLQMATAAQYTSAGLISPRVVGVVGIGHINGIVENWGK-VKASDIWPI 369
Query: 371 PSPKPAVSALKVLS-SLGVAVAGVAIISG 398
P + K+L ++ ++ G I G
Sbjct: 370 IRVPPQSLSTKILKFTIKASLLGATIYVG 398
>gi|300711514|ref|YP_003737328.1| TraB family protein [Halalkalicoccus jeotgali B3]
gi|448296379|ref|ZP_21486437.1| TraB family protein [Halalkalicoccus jeotgali B3]
gi|299125197|gb|ADJ15536.1| TraB family protein [Halalkalicoccus jeotgali B3]
gi|445581704|gb|ELY36055.1| TraB family protein [Halalkalicoccus jeotgali B3]
Length = 431
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 114/221 (51%), Gaps = 8/221 (3%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V LVGTAH+S +S EVE I+ +P VV +EL R L + G+++ +
Sbjct: 15 VRLVGTAHISADSVTEVEETIERERPDVVAVELDEGRYRQLKGELPDDLDAGDLL----R 70
Query: 205 KHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ F L W L+ V + L +I PG++ R A E A G V L DR +Q T++R
Sbjct: 71 GNTVFQFLAYWMLSYVQTRLGERFDIEPGADMRAAVETAESLGLGVALVDREIQTTIQRF 130
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W +M L K+KL+ S F + E+ + E+ D D++T ++ E + P E L
Sbjct: 131 WARMTLLEKLKLVGSLFLGMFGFGAGEEEELDMAELTDADVVTAMMAEFRRFSPGGAEAL 190
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP 361
+ ERD Y++ LL + V+AVVG GH +GI+ Y P
Sbjct: 191 IDERDAYIAHKLLALREGGHDVIAVVGAGHREGIERYLADP 231
>gi|261402765|ref|YP_003246989.1| TraB family protein [Methanocaldococcus vulcanius M7]
gi|261369758|gb|ACX72507.1| TraB family protein [Methanocaldococcus vulcanius M7]
Length = 396
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 141/254 (55%), Gaps = 31/254 (12%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPTVGEMVDM 201
CD+YL+GTAHVSK+S EVE + L P+ + +EL + R +S+L+ + + +D+
Sbjct: 16 CDIYLIGTAHVSKKSIEEVEEAVSTLHPEGIAVELDNKRFLSLLSNEE-------KNIDL 68
Query: 202 WK--KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQI 255
K K+ N LA K+ L I PGSE + A E A +YG + L DR + I
Sbjct: 69 KKVLKEGNFIRFFIYLILANSQKKIGEGLGIKPGSEMKKAIEIAGEYGLPIFLIDRDIDI 128
Query: 256 TLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDL---NRMLKEM-DDVDMLTLVIQEMSK 311
TL R +M KIK+L+ L S +DL + +LKEM ++ + +++E+S
Sbjct: 129 TLSRLISRMSFKEKIKILWDLLN-----ASEDDLEVDSDLLKEMVENPEKFIKLLKEIS- 182
Query: 312 AFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK-----QPVPVHD 366
PT+ E LV ERD++M+ L +++ +S++AVVG GH+ GIK Y K + + + +
Sbjct: 183 --PTIYEVLVDERDRFMAKKLFELSKGKNSLLAVVGAGHVNGIKQYLKKLEEGEDIDLIE 240
Query: 367 LMTIPSPKPAVSAL 380
L+ +P K +V L
Sbjct: 241 LIRVPRKKFSVMKL 254
>gi|45357840|ref|NP_987397.1| TraB family protein [Methanococcus maripaludis S2]
gi|45047400|emb|CAF29833.1| TraB family [Methanococcus maripaludis S2]
Length = 380
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 122/225 (54%), Gaps = 20/225 (8%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPTVGEMVDM 201
C++ LVGTAHVS +S +EVE I P++V +EL R V+M QN K VD+
Sbjct: 12 CNIRLVGTAHVSDDSVKEVENAIIETDPEIVAIELDKDRFVAMF--QNKK-----NNVDL 64
Query: 202 WKK-KHNTFGI-----LYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQI 255
K GI + + F + I PGSE + A + A+++G + L DRP+ +
Sbjct: 65 KSVIKQGKVGIYIVHSILANFQKNIGEQFGIKPGSEMKKATDLAIQHGKPISLIDRPINV 124
Query: 256 TLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPT 315
TL RT KM L K L L + + +N M+ DD L L+++++S P+
Sbjct: 125 TLSRTVNKMTLKEKFDFLMGLLTEQNLELDEKAVNDMVSNADD---LILLLKDIS---PS 178
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
+ ETLV ERD+YM+ L + + ++VAVVG GH+ GIKNY K+
Sbjct: 179 IYETLVDERDRYMAKNLFEASKGKENIVAVVGAGHVPGIKNYLKK 223
>gi|11497943|ref|NP_069167.1| pheromone shutdown protein (traB) [Archaeoglobus fulgidus DSM 4304]
gi|2650316|gb|AAB90915.1| pheromone shutdown protein (traB) [Archaeoglobus fulgidus DSM 4304]
Length = 396
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 120/213 (56%), Gaps = 13/213 (6%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKH 206
+VGTAHVSK S EV +I+ KP V +ELC R L + +V +++ +K
Sbjct: 8 IVGTAHVSKRSVEEVAEVIEREKPDAVAVELCPRRYHALVHGQREEISVADVI----RKG 63
Query: 207 NTFGILY----SWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
N F +L+ ++F KV + PGSE A E+A + G V+L DR + +T R W+
Sbjct: 64 NVFMLLFQLILAYFQRKVGEETGVKPGSEMLAAIEKAREAGADVLLIDRDIGLTFTRFWQ 123
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
K+ KIKL++ L ++ F +++ ML+E D+L ++++E K P + L+
Sbjct: 124 KLTFVEKIKLIFH-LVRSTFSGDEIEVDEMLEE----DVLDMLVKEFRKISPNAAKVLID 178
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
ERD YM++ LL + ++ +VAVVG GH +GI+
Sbjct: 179 ERDVYMAANLLNALSRYNRIVAVVGAGHRKGIE 211
>gi|340623461|ref|YP_004741914.1| TraB family protein [Methanococcus maripaludis X1]
gi|339903729|gb|AEK19171.1| TraB family protein [Methanococcus maripaludis X1]
Length = 380
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 122/225 (54%), Gaps = 20/225 (8%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPTVGEMVDM 201
C++ LVGTAHVS +S +EVE I P++V +EL R V+M QN K VD+
Sbjct: 12 CNIRLVGTAHVSDDSVKEVENAIIETDPEIVAIELDKDRFVAMF--QNKK-----NNVDL 64
Query: 202 WKK-KHNTFGI-----LYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQI 255
K GI + + F + I PGSE + A + A+++G + L DRP+ +
Sbjct: 65 KSVIKQGKVGIYIVHSILANFQKNIGEQFGIKPGSEMKKATDLAIQHGKPISLIDRPINV 124
Query: 256 TLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPT 315
TL RT KM L K L L + + +N M+ DD L L+++++S P+
Sbjct: 125 TLSRTVNKMTLKEKFDFLMGLLTEQNLELDEKAVNDMVSNADD---LILLLKDIS---PS 178
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
+ ETLV ERD+YM+ L + + ++VAVVG GH+ GIKNY K+
Sbjct: 179 IYETLVDERDRYMAKNLFEASKGKENIVAVVGAGHVPGIKNYLKK 223
>gi|195395146|ref|XP_002056197.1| GJ10803 [Drosophila virilis]
gi|194142906|gb|EDW59309.1| GJ10803 [Drosophila virilis]
Length = 567
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 153/310 (49%), Gaps = 34/310 (10%)
Query: 84 DPLSESIVSLGDEVRDESSDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTC 143
D ++ + L + +SD+ +T + V +T + + LP +V +L +T G
Sbjct: 233 DGGGDTQLQLAEPAATSNSDQPQTKREI-VIYDTLEEFDQNLPSTVTLL---NTPFGSK- 287
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPT 194
VYLVGTAH S+ES +V +I ++P VV +ELC SRV +L +N+ +P
Sbjct: 288 -VYLVGTAHFSEESQDDVSYVIRNVRPDVVMVELCPSRVHILKLDEKTLLEEAKNINIPK 346
Query: 195 VGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVI-LGDRPV 253
+ ++ + F IL A++A L + PG EFR AFEE K G ++ LGDRP+
Sbjct: 347 IRGILQTHGYINGIFFILLLQMSAQIAKDLGMAPGGEFRRAFEEIHKLPGCILHLGDRPI 406
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAF 313
+ITL R + LW +KL++ F S E+ ++E D+L ++QEM+ F
Sbjct: 407 RITLYRALRALSLWQTMKLVWRLTFTDSI--SIEE----VEECKQRDLLEKLMQEMAGEF 460
Query: 314 PTLMETLVHERDQYMSSTLLKVATEHSSVVA----------VVGKGHLQGIKNYWKQ--P 361
P + V ERD Y+ +L A ++ A VVG GH GI W Q P
Sbjct: 461 PAFSDVFVRERDLYLCHSLQLAALPQAAPGAHQVRPVRVVGVVGIGHANGIAKMWGQVDP 520
Query: 362 VPVHDLMTIP 371
+ ++ IP
Sbjct: 521 EKIPAILEIP 530
>gi|289192049|ref|YP_003457990.1| TraB family protein [Methanocaldococcus sp. FS406-22]
gi|288938499|gb|ADC69254.1| TraB family protein [Methanocaldococcus sp. FS406-22]
Length = 393
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 145/261 (55%), Gaps = 18/261 (6%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDM 201
CD+YL+GTAHVSK+S EVE II + P+ V +EL R S+++ + KV + +
Sbjct: 13 CDIYLIGTAHVSKDSIEEVENIISSVSPEGVAVELDDRRFFSLISNEEKKVDLKKVLKEG 72
Query: 202 WKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTW 261
K + IL + K+ L I PGSE + A E A +YG + L DR + ITL R
Sbjct: 73 NFLKFFIYLILANS-QKKIGESLGIKPGSEMKKAIEIASRYGLPIYLIDRDINITLSRLM 131
Query: 262 EKMPLWHKIKLLYSFLFQAFFLPSAE-DL---NRMLKEM-DDVDMLTLVIQEMSKAFPTL 316
++M KIK+ + L S E DL + +LKEM ++ + +++EMS PT+
Sbjct: 132 DRMTFKEKIKIFWELL------NSDEGDLEVDDDLLKEMVENPEKFIKLLKEMS---PTI 182
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVH--DLMTIPSPK 374
E LV ERD++M+ L +++ +S+VAVVG GH++GI Y KQ DLM + K
Sbjct: 183 YEVLVDERDRFMAKRLFELSKGKNSLVAVVGAGHVEGIVRYLKQLENGKDIDLMELIKVK 242
Query: 375 PAVSALKVLSSLGVAVAGVAI 395
+L L + G+++A +AI
Sbjct: 243 KRKKSLTKLLTYGISLAIIAI 263
>gi|150403200|ref|YP_001330494.1| TraB family protein [Methanococcus maripaludis C7]
gi|150034230|gb|ABR66343.1| TraB family protein [Methanococcus maripaludis C7]
Length = 380
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 121/222 (54%), Gaps = 14/222 (6%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPTVGEMVDM 201
CD+ LVGTAHVS +S +VE I P++V +EL R V+M QN K ++ +
Sbjct: 12 CDIRLVGTAHVSDDSITDVENAIVETDPELVAIELDKDRFVAMF--QNKKNDV--DLKSV 67
Query: 202 WKKKHNTFGILYSW---FLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K+ I++S F + I PGSE + A + A++YG + L DRP+ ITL
Sbjct: 68 IKQGKVGIYIVHSILANFQKNIGEQFGIKPGSEMKKATDLAIQYGKPLSLIDRPINITLS 127
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
RT KM K L L + + +N M+ DD L L+++++S P++ E
Sbjct: 128 RTINKMTFKEKFDFLIGLLTEQNIELDEKAVNEMVTNADD---LILLLKDIS---PSIYE 181
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
TLV ERD+YM+ L + + ++VAVVG GH+ GIKNY KQ
Sbjct: 182 TLVDERDRYMAKNLFESSKGKENIVAVVGAGHVPGIKNYLKQ 223
>gi|195108685|ref|XP_001998923.1| GI24230 [Drosophila mojavensis]
gi|193915517|gb|EDW14384.1| GI24230 [Drosophila mojavensis]
Length = 568
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 146/299 (48%), Gaps = 31/299 (10%)
Query: 116 ETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFL 175
+T + + LP +V +L +T G VYLVGTAH S+ES +V +I ++P VV +
Sbjct: 265 DTLEEFDQNLPSTVTLL---NTPFGSK--VYLVGTAHFSEESQDDVSYVIRNVRPDVVMV 319
Query: 176 ELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEI 226
ELC SRV +L +N+ +P + ++ + F IL A++A L +
Sbjct: 320 ELCPSRVHILKLDEKTLLEEAKNINIPKIRGILQTHGYINGIFFILLLQMSAQIAKDLGM 379
Query: 227 FPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPS 285
PG EFR AFEE K G ++ LGDRP++ITL R + LW +KL++ F S
Sbjct: 380 APGGEFRRAFEEIHKLPGCILHLGDRPIRITLYRALRALSLWQTMKLVWRLTFTDSI--S 437
Query: 286 AEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVA- 344
E++ K+ D+L ++QEM+ FP + V ERD Y+ +L A ++ A
Sbjct: 438 IEEVEECKKQ----DLLEKLMQEMAGEFPAFSDVFVRERDLYLCHSLQLAALPQAAPGAH 493
Query: 345 ---------VVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVA 394
VVG GH GI W Q P + P+ ++S ++L + G+
Sbjct: 494 QVRPVRVVGVVGIGHANGIAKMWGQVDPEKIPAILEIPQASLSQRLCKNTLKYGLLGLG 552
>gi|374636726|ref|ZP_09708280.1| TraB family protein [Methanotorris formicicus Mc-S-70]
gi|373558018|gb|EHP84385.1| TraB family protein [Methanotorris formicicus Mc-S-70]
Length = 387
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 120/220 (54%), Gaps = 8/220 (3%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDM 201
CD+YL+GTAHVS+ES R+VE I + P VV +EL R +++ + + ++
Sbjct: 13 CDIYLIGTAHVSEESVRKVEETILNINPDVVSVELDRERFFAIMGDNDTDNIDIKRIIKE 72
Query: 202 WKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTW 261
K ++ S F + L + PGSE + A E AM+Y + L DR + ITL R
Sbjct: 73 GKVGIFLLHMILSHFQKMIGEELGVKPGSEMKKAIEIAMQYQKPISLIDRQINITLTRLL 132
Query: 262 EKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEM-DDVDMLTLVIQEMSKAFPTLMETL 320
KM L KI S LF+ E N+ + EM + D L L ++++S PT+ E L
Sbjct: 133 NKMTLREKINFFLS-LFEEN--DEMEIDNKSINEMIKNADELVLFLKDIS---PTIYEVL 186
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
V ERD+YM+ L +++ +VAVVG GH++GI NY K+
Sbjct: 187 VDERDRYMAKNLYELSKGKEKIVAVVGAGHIKGIINYLKK 226
>gi|383319025|ref|YP_005379866.1| pheromone shutdown-related protein TraB [Methanocella conradii
HZ254]
gi|379320395|gb|AFC99347.1| pheromone shutdown-related protein TraB [Methanocella conradii
HZ254]
Length = 431
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 133/241 (55%), Gaps = 19/241 (7%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP--QNLKVPTVGEMVDM 201
++ LVGTAHVS++S R+VE I+ +P +V +EL + R L Q K + E++
Sbjct: 20 NIVLVGTAHVSEKSIRDVEEAIEAYRPDIVAVELDARRYQALKEGGQEKKEIPIKELL-- 77
Query: 202 WKKKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
K +N L LA KV + + + PGSE A E A K G V L DR + +TL
Sbjct: 78 --KGNNLAIFLIQTMLAFVQRKVGAEMGVKPGSEMLAAIEAANKRGIPVALIDRDLGVTL 135
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLPSAE-DLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
R W KM L K ++LYS + A + + + D+++M E D++ +I+E+ + P++
Sbjct: 136 ARFWSKMSLREKFRMLYSLILAALGIGTKDIDVDKMTSE----DVVADLIEELREFTPSV 191
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPV---PVHDLMTIPSP 373
E LV ERD Y++ LL++ + VVAVVG GH +GIK + + P P+ + ++P
Sbjct: 192 AEVLVDERDAYLAHNLLELG-KTKKVVAVVGAGHREGIKRHLEHPESMPPMESISSVPKR 250
Query: 374 K 374
+
Sbjct: 251 R 251
>gi|435852543|ref|YP_007314129.1| pheromone shutdown-related protein TraB [Methanomethylovorans
hollandica DSM 15978]
gi|433663173|gb|AGB50599.1| pheromone shutdown-related protein TraB [Methanomethylovorans
hollandica DSM 15978]
Length = 470
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 124/229 (54%), Gaps = 12/229 (5%)
Query: 149 GTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQ--NLKVPTVGEMVDMWKKKH 206
GTAHVS++S EV I+ KP +V +ELC R L + + VP + E++ K
Sbjct: 77 GTAHVSEKSVAEVNEAIEREKPDIVAVELCKPRYDSLKGKTTDTDVP-IKEILKGGKIYQ 135
Query: 207 NTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPL 266
+L + K A + + PG+E A + A ++G ++ L DR VQ+TL+R W KM
Sbjct: 136 YMIHMLLAHVQKKFADEMGVQPGAEMIKAIDAAEEHGARIALIDRDVQVTLQRFWNKMGF 195
Query: 267 WHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQ 326
K+K+L + + +D++ + + + D++T++++E P ++ L+ ERD
Sbjct: 196 IEKLKMLAGLVAAVLGIGGTKDID--MDTITNQDIVTMLVEEFRGTSPNAVKVLIDERDA 253
Query: 327 YMSSTLLKVATEHS-SVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPK 374
YM+S L+++A+ ++AVVG GH GI+NY P T+P P+
Sbjct: 254 YMASNLIRLASGGGKKIIAVVGAGHRAGIQNYLIHP------ETLPRPE 296
>gi|345493446|ref|XP_001604739.2| PREDICTED: traB domain-containing protein-like isoform 1 [Nasonia
vitripennis]
Length = 450
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 149/312 (47%), Gaps = 43/312 (13%)
Query: 100 ESSDRDETNGAVPVPEETKKVLPE-----ELPRSVVILTCDSTAEGGTCDVYLVGTAHVS 154
ES D T+ A VPE+ + P+ +LP +V +L T+EGG C YL+GTAH S
Sbjct: 102 ESDVEDNTSEANSVPEKPQGNKPDLNIDDDLPSTVTLL---KTSEGGKC--YLLGTAHFS 156
Query: 155 KESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK-----KKHNTF 209
ES +V +I ++P +V +ELC RV +L + + ++ K K++ +
Sbjct: 157 VESQNDVSKVIQAVQPHIVMVELCLDRVHVLQLDEETILEEAKNINFSKIRDTIKENGLY 216
Query: 210 GILYSWFLAKVASHLE----IFPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRRTWEKM 264
L+ + ++++HL + PG EFR AF EA K ++ +GDRP++IT R +
Sbjct: 217 TGLFQLLMLQMSAHLTKVLGLAPGGEFRRAFAEAKKIPNCIVHMGDRPIKITFSRAISAL 276
Query: 265 PLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHER 324
W IKL + L + S +D+ + D L ++ E++ FP L E V ER
Sbjct: 277 SWWQSIKLSWHLLTDKSPI-SQKDVEKYKCR----DSLEELMAELAGEFPALEEVFVKER 331
Query: 325 DQYMSSTLLKVATE----------HSSVVAVVGKGHLQGIKNYW-----KQPVPVHDLMT 369
D Y++ +L + VV VVG GH GI W Q P+ M+
Sbjct: 332 DTYLTYSLQLACSRPLVGPDGEPIPPRVVGVVGMGHTLGIIENWGKVKRSQIAPI---MS 388
Query: 370 IPSPKPAVSALK 381
IP P + LK
Sbjct: 389 IPPPSLSGRILK 400
>gi|241720809|ref|XP_002413627.1| TraB domain-containing protein, putative [Ixodes scapularis]
gi|215507443|gb|EEC16935.1| TraB domain-containing protein, putative [Ixodes scapularis]
Length = 474
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 140/270 (51%), Gaps = 32/270 (11%)
Query: 100 ESSDRDE----TNGAVPVP-------EETKKVLPEELPRSVVILTCDSTAEGGTCDVYLV 148
ES D DE ++G VP + +K PE LP +V +L D EG C VYLV
Sbjct: 133 ESEDPDEMLGLSDGDGEVPRMPHMTIQRNRKANPE-LPETVTVLKTD---EG--CMVYLV 186
Query: 149 GTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK---- 204
GTAH S ES +V I +P VV +ELC SRV++L+ + + ++M K
Sbjct: 187 GTAHFSLESQEDVAKTIQETQPDVVLIELCKSRVNILSFDEELILKESQSMNMEKMMSTI 246
Query: 205 KHNTF--GILYSWFL---AKVASHLEIFPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLR 258
K N GI+Y L A + L + PG EFR A +EA K G +I LGDRP+QITL+
Sbjct: 247 KQNGLVQGIMYILLLSMSAHLTRQLGMAPGGEFRRAVQEAEKVKGCLIHLGDRPLQITLQ 306
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R + +W K++L + + A S E++ R K+ D+L ++ EM+ FP L +
Sbjct: 307 RALAALSVWQKLRLAW-HMITAKEPISKEEVERCKKQ----DLLEEMLAEMTGEFPALSK 361
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGK 348
V ERD +++ +L A+ S+ G+
Sbjct: 362 VFVKERDIFLAYSLRLAASPMPSMTTPSGE 391
>gi|256811290|ref|YP_003128659.1| TraB family protein [Methanocaldococcus fervens AG86]
gi|256794490|gb|ACV25159.1| TraB family protein [Methanocaldococcus fervens AG86]
Length = 396
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 37/260 (14%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDM 201
CD+YL+GTAHVSK+S EVE II P+ + +EL R S++T +N K+
Sbjct: 16 CDIYLIGTAHVSKDSVEEVEKIISSTSPEGIAVELDDRRFFSLITNENKKISL------- 68
Query: 202 WKKKHNTFGILYSWFL--------AKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
KK G +F+ ++ I PGSE + A E A +YG V L DR +
Sbjct: 69 --KKVLEEGDFIKFFIYLILANSQKRIGESFGIKPGSEMKKAIEIAGRYGVPVYLIDRDI 126
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDL---NRMLKEM-DDVDMLTLVIQEM 309
ITL R +KM K+K+L+ L EDL + +LKEM + + T +++E+
Sbjct: 127 NITLSRLIDKMSFKEKMKILWELLNS-----EDEDLEVNDDLLKEMVEHPEKFTKLLKEI 181
Query: 310 SKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ-----PVPV 364
S PT+ E +V ERD++M+ L +++ +S+VAVVG GH++GI Y K+ + +
Sbjct: 182 S---PTIYEVMVDERDKFMAKRLFELSKGKNSLVAVVGAGHVEGIIRYLKKLESGDDIDL 238
Query: 365 HDLMTIPSPKPAVSALKVLS 384
+L+ + K +++ KVL+
Sbjct: 239 MELIKVRRKKKSLT--KVLA 256
>gi|195037477|ref|XP_001990187.1| GH19196 [Drosophila grimshawi]
gi|193894383|gb|EDV93249.1| GH19196 [Drosophila grimshawi]
Length = 563
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 135/271 (49%), Gaps = 33/271 (12%)
Query: 123 EELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV 182
+ LP +V +L +T G VYLVGTAH S+ES +V +I ++P VV +ELC SRV
Sbjct: 267 QNLPSTVTLL---NTPFGSK--VYLVGTAHFSEESQDDVSYVIRNVRPDVVMVELCPSRV 321
Query: 183 SMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFR 233
+L +N+ +P + ++ + F IL A++A L + PG EFR
Sbjct: 322 HILKLDEKTLLEEAKNINIPKIRGILQTHGYINGIFFILLLQMSAQIAKDLGMAPGGEFR 381
Query: 234 VAFEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM 292
AFEE K G ++ LGDRP++ITL R + LW +KL++ F S E++ +
Sbjct: 382 RAFEEIHKLPGCILHLGDRPIRITLYRALRALSLWQTMKLVWRLTFTDSI--SCEEVEKC 439
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVA-------- 344
+ D+L ++QEM+ FP + V ERD Y+ +L A ++ A
Sbjct: 440 KQR----DLLEKLMQEMAGEFPAFSDVFVRERDLYLCHSLQLAALPQAAPGAHHVRPVRV 495
Query: 345 --VVGKGHLQGIKNYWKQ--PVPVHDLMTIP 371
VVG GH GI W P + ++ IP
Sbjct: 496 VGVVGIGHANGIAKMWGHVDPEKIPAILEIP 526
>gi|325958100|ref|YP_004289566.1| TraB family protein [Methanobacterium sp. AL-21]
gi|325329532|gb|ADZ08594.1| TraB family protein [Methanobacterium sp. AL-21]
Length = 384
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 148/271 (54%), Gaps = 19/271 (7%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMW 202
++ L+GTAHVSKES EV A I +P+VV +EL +R +M+ +N + + ++
Sbjct: 5 NLKLIGTAHVSKESIEEVRAAIIENQPKVVAVELDLNRFQNMMAERNGQEKQDINLREII 64
Query: 203 K-KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
K K + F L S FL+ K+ L + PGSE A + A + G V L DR + +TL
Sbjct: 65 KGDKLSIF--LVSMFLSYMQRKIGDKLGVKPGSEMLAAVDTAEEIGANVALIDRDISLTL 122
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLM 317
+R EKM K K LY + +FF S+E+++ ++ + D D LT V++ + P
Sbjct: 123 KRAIEKMSWIEKAKFLYG-IITSFF--SSEEIDD-VESIKDGDELTEVMEYFKEMSPKAY 178
Query: 318 ETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPV---PVHDLMTIPSPK 374
+ LV ERD YMS LL++ E SVVAVVG GH +GI Y + P P+ DL+T+ +
Sbjct: 179 DVLVSERDAYMSHRLLEINNE--SVVAVVGAGHKKGITRYMEHPEELPPIEDLLTLKKSR 236
Query: 375 PAVSALKVLSS--LGVAVAGVAIISGIYINC 403
+ + + S + V + +AI+ GI +
Sbjct: 237 IPIGKIILYSIPLVFVIIFALAILHGINVQT 267
>gi|345493444|ref|XP_003427074.1| PREDICTED: traB domain-containing protein-like isoform 2 [Nasonia
vitripennis]
Length = 438
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 149/312 (47%), Gaps = 43/312 (13%)
Query: 100 ESSDRDETNGAVPVPEETKKVLPE-----ELPRSVVILTCDSTAEGGTCDVYLVGTAHVS 154
ES D T+ A VPE+ + P+ +LP +V +L T+EGG C YL+GTAH S
Sbjct: 102 ESDVEDNTSEANSVPEKPQGNKPDLNIDDDLPSTVTLL---KTSEGGKC--YLLGTAHFS 156
Query: 155 KESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK-----KKHNTF 209
ES +V +I ++P +V +ELC RV +L + + ++ K K++ +
Sbjct: 157 VESQNDVSKVIQAVQPHIVMVELCLDRVHVLQLDEETILEEAKNINFSKIRDTIKENGLY 216
Query: 210 GILYSWFLAKVASHLE----IFPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRRTWEKM 264
L+ + ++++HL + PG EFR AF EA K ++ +GDRP++IT R +
Sbjct: 217 TGLFQLLMLQMSAHLTKVLGLAPGGEFRRAFAEAKKIPNCIVHMGDRPIKITFSRAISAL 276
Query: 265 PLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHER 324
W IKL + L + S +D+ + D L ++ E++ FP L E V ER
Sbjct: 277 SWWQSIKLSWHLLTDKSPI-SQKDVEKYKCR----DSLEELMAELAGEFPALEEVFVKER 331
Query: 325 DQYMSSTLLKVATE----------HSSVVAVVGKGHLQGIKNYW-----KQPVPVHDLMT 369
D Y++ +L + VV VVG GH GI W Q P+ M+
Sbjct: 332 DTYLTYSLQLACSRPLVGPDGEPIPPRVVGVVGMGHTLGIIENWGKVKRSQIAPI---MS 388
Query: 370 IPSPKPAVSALK 381
IP P + LK
Sbjct: 389 IPPPSLSGRILK 400
>gi|150400678|ref|YP_001324444.1| TraB family protein [Methanococcus aeolicus Nankai-3]
gi|150013381|gb|ABR55832.1| TraB family protein [Methanococcus aeolicus Nankai-3]
Length = 393
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 122/225 (54%), Gaps = 13/225 (5%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
CD++L+GTAHVS++S +VE I + P ++ +EL R +T N P + VD+
Sbjct: 12 CDIHLIGTAHVSEDSVDKVEKSICEINPDLIAVELDKDRFFAITKNNTNDPDNLKKVDLI 71
Query: 203 K--KKHNTFGILYSWFLAK----VASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
K K+ N L LA + I PGSE + A + A+ Y + L DRP+ IT
Sbjct: 72 KIIKEGNISLFLVHTLLANFQKDIGEKFGIKPGSEMKKAIDLAIAYNKPISLIDRPINIT 131
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAE-DLNRMLKEMDDVDMLTLVIQEMSKAFPT 315
L+R + + K++++ SF+ + E +N M+ DD L V++E+S PT
Sbjct: 132 LKRAIQSLSSKEKLQIMLSFISGDKNIDLDEKSINEMVDNADD---LIDVLKEVS---PT 185
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
+ LV ERD+YM+ + +++ E ++ VVG GHL+GI NY K+
Sbjct: 186 IYGVLVDERDKYMAKNIYELSKEKERILVVVGAGHLKGIINYLKK 230
>gi|442760773|gb|JAA72545.1| Hypothetical protein, partial [Ixodes ricinus]
Length = 440
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 140/270 (51%), Gaps = 32/270 (11%)
Query: 100 ESSDRDE----TNGAVPVP-------EETKKVLPEELPRSVVILTCDSTAEGGTCDVYLV 148
ES D DE ++G VP + +K PE LP +V +L D EG C VYLV
Sbjct: 99 ESEDPDEMLGLSDGDGEVPRMPHLTIQRNRKANPE-LPETVTVLKTD---EG--CVVYLV 152
Query: 149 GTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK---- 204
GTAH S ES +V I +P VV +ELC SRV++L+ + + ++M K
Sbjct: 153 GTAHFSLESQEDVAKTIQETQPDVVLIELCKSRVNILSFDEELILKESQSMNMEKMMSTI 212
Query: 205 KHNTF--GILYSWFL---AKVASHLEIFPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLR 258
K N GI+Y L A + L + PG EFR A +EA K G +I LGDRP+QITL+
Sbjct: 213 KQNGLVQGIMYILLLSMSAHLTRQLGMAPGGEFRRAVQEAEKVKGCLIHLGDRPLQITLQ 272
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R + +W K++L + + A S E++ R K+ D+L ++ EM+ FP L +
Sbjct: 273 RALAALSVWQKLRLAW-HMITAKEPISKEEVERCKKQ----DLLEEMLAEMTGEFPALSK 327
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGK 348
V ERD +++ +L A+ S+ G+
Sbjct: 328 VFVKERDVFLAYSLRLAASPMPSMTTPSGE 357
>gi|195446379|ref|XP_002070753.1| GK10854 [Drosophila willistoni]
gi|194166838|gb|EDW81739.1| GK10854 [Drosophila willistoni]
Length = 549
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 123/249 (49%), Gaps = 28/249 (11%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTV 195
VYLVGTAH S+ES +V +I ++P VV +ELC SR+ +L +N+ +P +
Sbjct: 270 VYLVGTAHFSEESQDDVSFVIRNVRPDVVMVELCPSRIHILKLDEKTLLEEAKNINIPKI 329
Query: 196 GEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVI-LGDRPVQ 254
++ + F IL A++A L + PG EFR AFEE K G ++ LGDRP++
Sbjct: 330 RGILQTHGYINGIFFILLLQMSAQIAKDLGMAPGGEFRRAFEEIRKLPGCILHLGDRPIR 389
Query: 255 ITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFP 314
ITL R + LW +KL++ F S E+ ++E D+L ++QEM+ FP
Sbjct: 390 ITLYRALRALSLWQTMKLVWRLTFTDSI--SIEE----VEECKQRDLLEKLMQEMAGEFP 443
Query: 315 TLMETLVHERDQYMSSTLLKVATEHSSVVAVVGK----------GHLQGIKNYWKQ--PV 362
+ V ERD ++ +L A ++ A + GH GI W P
Sbjct: 444 AFSDVFVRERDLFLCHSLQLAALPQAAPGATQVRPVRVVGVVGIGHANGIAKMWGHVDPE 503
Query: 363 PVHDLMTIP 371
+ ++ IP
Sbjct: 504 KIPSILEIP 512
>gi|390177837|ref|XP_003736496.1| LOW QUALITY PROTEIN: GA27159, isoform E [Drosophila pseudoobscura
pseudoobscura]
gi|388859217|gb|EIM52569.1| LOW QUALITY PROTEIN: GA27159, isoform E [Drosophila pseudoobscura
pseudoobscura]
Length = 545
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 140/278 (50%), Gaps = 33/278 (11%)
Query: 116 ETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFL 175
+T + + LP +V +L +T G VYLVGTAH S+ES +V +I ++P VV +
Sbjct: 242 DTLEEFDQNLPSTVTLL---NTPFGSK--VYLVGTAHFSEESQDDVSFVIRNVRPDVVMV 296
Query: 176 ELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEI 226
ELC SR+ +L +N+ +P + ++ + F IL A++A L +
Sbjct: 297 ELCPSRIHILKLDEKTLLEEAKNINIPKIRGLIQTHGYINGVFFILMLQMSAQIAKDLGM 356
Query: 227 FPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPS 285
PG EFR AFEE K G ++ LGDRP++IT+ R + LW +KL++ F S
Sbjct: 357 APGGEFRRAFEEIHKLPGCILHLGDRPIRITIYRALRALSLWQTMKLVWRLTFTDSI--S 414
Query: 286 AEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSS---- 341
E++ K+ D+L ++QEM+ FP + LV ERD ++ +L A ++
Sbjct: 415 IEEVEECRKK----DLLRKLMQEMAGEFPAFSDVLVRERDLFLCHSLQVAALPQAAPGGS 470
Query: 342 ------VVAVVGKGHLQGIKNYWKQ--PVPVHDLMTIP 371
VV VVG GH GI W P + ++ IP
Sbjct: 471 GVRPVRVVGVVGIGHANGIAKMWGNVDPEKIPSILEIP 508
>gi|294496675|ref|YP_003543168.1| TraB family protein [Methanohalophilus mahii DSM 5219]
gi|292667674|gb|ADE37523.1| TraB family protein [Methanohalophilus mahii DSM 5219]
Length = 446
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 138/267 (51%), Gaps = 15/267 (5%)
Query: 132 LTCDSTAEG---GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQ 188
+ DST+E + LVGTAHVS++S REV+ I +P VV +ELC R L +
Sbjct: 33 FSTDSTSENVAPAPSRISLVGTAHVSEKSIREVKETIHNQQPDVVAVELCKGRYDALKGK 92
Query: 189 NLKVP-TVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVI 247
+V E++ K +L + ++ + + PG+E A E A + G V
Sbjct: 93 TQTSDISVKELLAEGKVYFFLVHMLLAHVQKRIGKDMGVQPGAEMLAAIEAAEEIGADVA 152
Query: 248 LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQ 307
L DR +Q+TL+R W KM L K K++ + + A L + + + + D +T++I+
Sbjct: 153 LVDRDIQVTLQRFWGKMGLIEKTKMVGTLIAAA--LGIGGGDDIDIDNITEQDTVTVLIE 210
Query: 308 EMSKAFPTLMETLVHERDQYMSSTLLKVATEHS-SVVAVVGKGHLQGIKNYWKQPV---P 363
E+ P+ E L+ ERD Y++ +L++ A ++VAVVG GH GI+ Y P P
Sbjct: 211 ELRHTSPSAAEVLIDERDAYIAGSLVRTAAGGGKNIVAVVGAGHRSGIEKYLSNPKTIPP 270
Query: 364 VHDLMTIPSPKPAVSALKVLSSLGVAV 390
+ L+T+ PK S +KV G+A+
Sbjct: 271 LSSLVTL--PKKRFSLMKV---FGIAI 292
>gi|395645973|ref|ZP_10433833.1| TraB family protein [Methanofollis liminatans DSM 4140]
gi|395442713|gb|EJG07470.1| TraB family protein [Methanofollis liminatans DSM 4140]
Length = 400
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 142/281 (50%), Gaps = 31/281 (11%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ LVGTAHVS++S EV A I+ +P +V +EL R + L + P V +++
Sbjct: 3 EIRLVGTAHVSEKSVAEVRAAIEEFQPGIVGVELDPGRYNALRHEQAP-PKVEDVL---- 57
Query: 204 KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K N +L+ W LA K+ + + PG+E A EE G + L DR ++ITL R
Sbjct: 58 KAGNFSQLLFQWTLAYLQRKIGMDVGVEPGAEMVAAIEEVEGRGLPLALIDRDIRITLAR 117
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAE-DLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
WE M LW K+K++Y+ + E D++ + ++ D+++ + E K P
Sbjct: 118 FWEGMSLWEKVKMVYALALSVGGVEGDEIDIDALTRQ----DVVSAALDEFRKFSPNGAR 173
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPV---PVHDLMTIPSPKP 375
L+ ERD Y++ +L ++ + V+AV+G GH++G++ Y P P DL+ P P
Sbjct: 174 ALIDERDAYLARRILDLSGRYDRVMAVIGAGHVRGVERYLSSPELLPPEADLVARPKSYP 233
Query: 376 ----------AVSALKVL----SSLGVAVAGVAIISGIYIN 402
A+ A ++ S +G V G AI+ + IN
Sbjct: 234 WGTIVGGAFIAMFAFLIISLAFSGVGFEVLGWAILYWVLIN 274
>gi|159905063|ref|YP_001548725.1| TraB family protein [Methanococcus maripaludis C6]
gi|159886556|gb|ABX01493.1| TraB family protein [Methanococcus maripaludis C6]
Length = 380
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 123/229 (53%), Gaps = 14/229 (6%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPTVGEMVDM 201
C++ LVGTAHVS +S +VE I P++V +EL R V+M QN K ++ +
Sbjct: 12 CNIRLVGTAHVSDDSITDVENAIVETDPELVAIELDKDRFVAMF--QNKKNDV--DLKSV 67
Query: 202 WKKKHNTFGILYSW---FLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K+ I++S F + I PGSE + A + A++YG + L DRP+ ITL
Sbjct: 68 IKQGKVGIFIVHSILANFQKNIGEQFGIKPGSEMKKATDLAIQYGKPLSLIDRPINITLS 127
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
RT KM K L L + + +N M+ DD L L+++++S P++ E
Sbjct: 128 RTINKMTFKEKFDFLVGLLTEQNVELDEKAVNDMVSNADD---LILLLKDIS---PSIYE 181
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDL 367
TLV ERD+YM+ L + + ++VAVVG GH+ GIKNY K+ D+
Sbjct: 182 TLVDERDKYMAKNLFESSKGKENIVAVVGAGHVPGIKNYLKKMESGEDI 230
>gi|440795370|gb|ELR16494.1| TraB subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 365
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 110/207 (53%), Gaps = 30/207 (14%)
Query: 195 VGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQ 254
+ E++ K+ N ++ S +V ++++ PGSEFR A +E MKYG +++LGDRPV+
Sbjct: 132 ISELLRRRKEGANILHLIISMVFERVTKNIKVMPGSEFRAAAQEGMKYGARIVLGDRPVE 191
Query: 255 ITLRRTWEKMPLWHKIKLLYSFLFQAFF---------LPSAEDLNRMLKE----MDDVDM 301
ITL+RTW + +W K+KLLY L S D+ L+E M + D+
Sbjct: 192 ITLKRTWGNLSVWEKLKLLYFVLMDTSLDIKEPGWEISSSGWDILASLEEDIERMKNSDV 251
Query: 302 LTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVV--------------- 346
+T +++E+S FP+L+ L+ ERDQ+++ L + ++VAVV
Sbjct: 252 ITEMVKELSTEFPSLVGPLITERDQFLACKLRSCPGD--TIVAVVGLDKKPQQQHNASRT 309
Query: 347 GKGHLQGIKNYWKQPVPVHDLMTIPSP 373
G GH G+ +W + + + + +P P
Sbjct: 310 GMGHCAGMVEWWDRDIDLRSICAVPPP 336
>gi|381205019|ref|ZP_09912090.1| TraB family protein [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 386
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 125/240 (52%), Gaps = 9/240 (3%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWK 203
+ LVGTAH+S ES EV +I+ +P V +ELC++R L K + +++ K
Sbjct: 17 IVLVGTAHISMESVEEVSRVIEQEQPDAVCIELCAARYEALRYGDRWKEMDLFKVIRQGK 76
Query: 204 KKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
+L S F ++ + L + PG+E A A K++L DR V++TL+RTW +
Sbjct: 77 AMLLLANLLMSAFQRRLGTQLGVEPGAEMVEAARVAEDLEAKIVLADRDVRVTLQRTWRR 136
Query: 264 MPLWHKIKLLYSFLFQAFFLP--SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLV 321
+ W K KL + F ED+ RM + D+LT ++ ++ P + ETL+
Sbjct: 137 LSFWRKWKLSGQLMGSMFVDDPIQKEDIERMKQS----DVLTDALETLASQAPEMKETLI 192
Query: 322 HERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALK 381
ERDQY++ + + T+ +VAVVG GH+ GIK Q +++L +P P + LK
Sbjct: 193 DERDQYLAEKIRQ--TDSPKIVAVVGAGHVPGIKRELGQEHDLNELERVPPPGSLGTVLK 250
>gi|333988273|ref|YP_004520880.1| TraB family protein [Methanobacterium sp. SWAN-1]
gi|333826417|gb|AEG19079.1| TraB family protein [Methanobacterium sp. SWAN-1]
Length = 386
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 141/267 (52%), Gaps = 14/267 (5%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPTVGEMVDMW 202
++ ++GTAHVS +S EV I P VV +ELC +R ++M+ +N + + ++
Sbjct: 5 NLKIIGTAHVSDKSVEEVRQTILEENPDVVAVELCQNRYLNMMAEKNGQQKQDVPIKEII 64
Query: 203 KKKHNTFGIL---YSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K + T ++ S+F K+ + + PGSE A E A + G KV L DR +QITL+R
Sbjct: 65 KGNNLTMFLVSTFLSYFQKKIGEDVGVKPGSEMIAAIEAADEVGAKVALIDRDIQITLKR 124
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
+M + K K +Y + F A + +KE D + + ++MS P +
Sbjct: 125 ALNQMSYFEKAKFVYGIIASFFSKEEAIEDIESIKEGDTLAEIMGYFKDMS---PKAFDV 181
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPV---PVHDLMTIPSPKPA 376
LV ERD +M+S LL++ E+ VVAVVG GH +GIK + P P+ +L+ I K
Sbjct: 182 LVTERDAFMASRLLEINEEN--VVAVVGAGHQEGIKKNMENPKDIPPLQELLNIKKSKIP 239
Query: 377 VSALKVLS--SLGVAVAGVAIISGIYI 401
+ L + S ++ + + +A I+GI I
Sbjct: 240 IGKLILFSIPAIFIIIFVLAFINGINI 266
>gi|390177839|ref|XP_003736497.1| GA27162, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859218|gb|EIM52570.1| GA27162, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 545
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 139/278 (50%), Gaps = 33/278 (11%)
Query: 116 ETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFL 175
+T + + LP +V +L +T G VYLVGTAH S+ES +V +I ++P VV +
Sbjct: 242 DTLEEFDQNLPSTVTLL---NTPFGSK--VYLVGTAHFSEESQDDVSLVIRNVRPDVVMV 296
Query: 176 ELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEI 226
ELC SR+ +L +N+ +P + ++ + F IL A++A L +
Sbjct: 297 ELCPSRIHILKLDEKTLLEEAKNINIPKIRGLIQTHGYINGVFFILMLQMSAQIAKDLGM 356
Query: 227 FPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPS 285
PG EFR AFEE K G ++ LGDRP++IT+ R + LW +KL++ F S
Sbjct: 357 APGGEFRRAFEEIHKLPGCILHLGDRPIRITIYRALRALSLWQTMKLVWRLTFTDSI--S 414
Query: 286 AEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSS---- 341
E++ K+ D+L ++QEM+ FP + V ERD ++ +L A ++
Sbjct: 415 IEEVEECKKK----DLLEKLMQEMAGEFPAFSDVFVRERDLFLCHSLQVAALPQAAPGGS 470
Query: 342 ------VVAVVGKGHLQGIKNYWKQ--PVPVHDLMTIP 371
VV VVG GH GI W P + ++ IP
Sbjct: 471 GVRPVRVVGVVGIGHANGIAKMWGNVDPEKIPSILEIP 508
>gi|290986918|ref|XP_002676170.1| predicted protein [Naegleria gruberi]
gi|284089771|gb|EFC43426.1| predicted protein [Naegleria gruberi]
Length = 439
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 115/236 (48%), Gaps = 43/236 (18%)
Query: 139 EGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNL-------- 190
E G ++++GTAHVS+ES REV +I KP +V LELC R S+L N+
Sbjct: 48 EQGNYRIHVLGTAHVSEESAREVRELILEKKPSIVILELCQGRSSILVDTNILKKKPFEK 107
Query: 191 ---------KVPTVGE--------------------MVDMWKKKHNT--FGILYSWFLAK 219
P + E ++D KKK F + +F+ K
Sbjct: 108 SENSFDGENSSPILMEKTEEIDPHSNNNNRQSLFSLLMDYVKKKRKITLFQLALVYFMQK 167
Query: 220 VASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQ 279
V + L+I G E + A++ ++K ++ILGDRP+ ITL R W M + K K + L+
Sbjct: 168 VTNDLKIQTGIEMKAAYDISVKLNSRIILGDRPIDITLNRCWHLMGYFQKFKFISHILYA 227
Query: 280 AFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKV 335
S++D+ MLK D+LT +I+E FP L LV ERD Y++ ++LK
Sbjct: 228 CTQTFSSKDI-EMLKH---SDILTDIIEEFGNQFPQLARVLVDERDAYLTHSILKA 279
>gi|330507441|ref|YP_004383869.1| TraB family protein [Methanosaeta concilii GP6]
gi|328928249|gb|AEB68051.1| TraB family protein [Methanosaeta concilii GP6]
Length = 429
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 141/276 (51%), Gaps = 17/276 (6%)
Query: 103 DRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVE 162
D D+T PE T +++ P + LT EG + ++ +VGTAHVS++S EV
Sbjct: 2 DFDKTEAKEDCPEPTCRIIE---PDAGADLT-----EGLSHEITIVGTAHVSEKSALEVV 53
Query: 163 AIIDFLKPQVVFLELCSSRVSMLTPQNLKVPT-VGEMVDMWKKKHNTFGILYSWFLAKVA 221
I+ +P +V +ELC SR LT Q K +G+++ K +L ++ K+
Sbjct: 54 RRIEETRPDIVAVELCLSRYKALTGQEEKSEIEIGKLLSGGKLYVFLVQLLLAYMQQKIG 113
Query: 222 SHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAF 281
+ + PGSE A A G +V L DR V IT++R W M + KI+L+ S + A
Sbjct: 114 QEMGVKPGSEMLAAIRAAQSTGARVALVDRDVGITIQRFWSAMGFFDKIRLIGSLIQGAL 173
Query: 282 FLPSAE-DLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHS 340
+ E D++ + ++ D+++ +I E K P LV ERD Y++ LL + +
Sbjct: 174 WGEEEEIDIDNITQD----DVVSQMIGEFRKISPGAASVLVDERDAYLARNLLSL-SRQG 228
Query: 341 SVVAVVGKGHLQGIKNYWKQP--VPVHDLMTIPSPK 374
V+AVVG GH +GI+ + P +P + + + + K
Sbjct: 229 RVLAVVGAGHKEGIERHLSNPEAIPAIESLNVKAKK 264
>gi|256830287|ref|YP_003159015.1| TraB family protein [Desulfomicrobium baculatum DSM 4028]
gi|256579463|gb|ACU90599.1| TraB family protein [Desulfomicrobium baculatum DSM 4028]
Length = 390
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 133/253 (52%), Gaps = 13/253 (5%)
Query: 123 EELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV 182
E LP SV ++ E G +LVGTAHVS ES +V ++ ++P + +ELC +R
Sbjct: 4 ENLPESVTVV------EEGEKRFFLVGTAHVSLESVEDVRRTVEIVRPDSICVELCPARH 57
Query: 183 SMLTPQN-LKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMK 241
+T ++ K + +++ K ++ F K+ L + PG+E A +
Sbjct: 58 QAMTRRDDWKRMDIYKVIKEGKAVFLMVQLVLQAFYRKIGDKLGVQPGAEMMEGVRLAGE 117
Query: 242 YGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVD 300
G ++L DR VQ+TL+R W + W K++L+ L F +D+++ +++++ D
Sbjct: 118 TGATLVLADRDVQVTLKRVWGYLGFWKKLQLMSQLLTSIFV---DDDVDKALIEDLKKKD 174
Query: 301 MLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
L ++ ++ FP + E L+ ERD Y++ + K +++VAVVG GH+ G++ Y+ Q
Sbjct: 175 QLAAIMGSFAENFPQIKERLIDERDIYLAQKIRK--APGTNIVAVVGAGHVPGMQKYFGQ 232
Query: 361 PVPVHDLMTIPSP 373
+ + L +P P
Sbjct: 233 EIDLAPLEELPPP 245
>gi|203284326|ref|YP_002222066.1| pheromone shutdown protein [Borrelia duttonii Ly]
gi|201083769|gb|ACH93360.1| pheromone shutdown protein [Borrelia duttonii Ly]
Length = 402
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 140/250 (56%), Gaps = 25/250 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML--TPQNLKVPTVGEMVDMW 202
+Y++GTAHVSK+S ++ +ID LKP + +EL +R + T +N K + D++
Sbjct: 25 IYVLGTAHVSKKSSQDTANLIDILKPNFIAVELDEARYHAILQTDENEKWRNL----DIY 80
Query: 203 K--KKHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
K K+ F I+ S F K+A I PG E + A +A ++ +IL DR V+ T
Sbjct: 81 KVIKQGKAFLLIVQIILSNFQKKLAKEQGISPGEEMKTAILKAKEHNIPLILADRKVETT 140
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
L+R W +P++ K K++ S LF + ED LKE D L+ +++E++K PT+
Sbjct: 141 LKRAWNCVPIFEKTKIISS-LFSFSDIKVTEDEIEKLKEQ---DALSNIMEELAKEIPTV 196
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ------PVPVHDLMTI 370
+ L+ ERD++++S +L+ + +++AVVG GH++GI K+ + + +L TI
Sbjct: 197 KKVLIDERDEFIASKILEGS---GTILAVVGAGHVKGIIENLKEIQDTKKIINIEELNTI 253
Query: 371 PSPKPAVSAL 380
P ++S L
Sbjct: 254 PKNNFSISKL 263
>gi|358342065|dbj|GAA49614.1| traB domain-containing protein [Clonorchis sinensis]
Length = 420
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 116/216 (53%), Gaps = 17/216 (7%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
ELP +V +L C GT VYLVGTAH SKES EV+ I+ P + LELCS+R
Sbjct: 50 ELPETVSVLEC----MNGT-KVYLVGTAHFSKESIDEVKKIVSQTHPDFLVLELCSNRTR 104
Query: 184 MLTPQNLKVPTVGEMVDMW---KKKHNTFGILYSWFLA---KVASHLEIFPGSEFRVAFE 237
+L + K+ + +D+ K + G+L L + + L + PG EFR A +
Sbjct: 105 VLVSDDEKIKQEAKEIDILTHIKMSGLSHGLLQYLMLRLNLYLINTLGMSPGGEFRAAAQ 164
Query: 238 EAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEM 296
EAMK ++LGDRP+ ITL+R + + W KIKL +S LF + + + ++EM
Sbjct: 165 EAMKQPHCHIVLGDRPISITLQRAFNSLGPWTKIKLGFSLLFDLEPITAEQ-----IEEM 219
Query: 297 DDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL 332
D L +I EM+ P L L+ ERD Y++ ++
Sbjct: 220 KKSDFLERIIMEMAGEHPELTRILLEERDMYLAKSI 255
>gi|406896995|gb|EKD41088.1| pheromone shutdown protein TraB, partial [uncultured bacterium]
Length = 251
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 117/219 (53%), Gaps = 9/219 (4%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVD 200
G +++L+GTAH+SKES V +I +P V +EL R L + K + ++ +
Sbjct: 22 GNREIFLIGTAHISKESVDLVRQVIAKERPDCVCVELDEKRYEALAKR--KTWELLDLRE 79
Query: 201 MWKKKHNT---FGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ +KK + ++ + + ++ + + PG+E A +EA KYG V L DR V++TL
Sbjct: 80 IIRKKQLSTLLINMILASYQKRLGDQMGVKPGTELLEAVQEAEKYGIPVALCDRDVRVTL 139
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLM 317
RR W+ W K LL S L F E L+E+ + D+L+ ++ E+ +A P L
Sbjct: 140 RRAWQSTSFWRKNYLLASILTSMF--EETEITEEKLRELKESDVLSELLSELGQAMPELK 197
Query: 318 ETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKN 356
+ L+ ERD +++ + E +VAVVG GH+ GIK
Sbjct: 198 QVLIDERDTFLAEKI--KGAEGKRLVAVVGAGHVAGIKT 234
>gi|357040334|ref|ZP_09102122.1| TraB family protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355356687|gb|EHG04471.1| TraB family protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 391
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 130/260 (50%), Gaps = 13/260 (5%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN-LKVPTVGEMVDMW 202
++ L+GTAHVSK S EV+ +I+ KP V +ELC R +T + K + +++
Sbjct: 17 EIILIGTAHVSKRSAEEVKEVIEREKPDTVCVELCQPRYQSVTDADKWKNTDIFKIIKDG 76
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K ++ S + ++A I PG E A G + L DR + TL R W
Sbjct: 77 KAMLLLINLVLSSYQKRLARQFGIQPGQEMIQGIASANDIGANLCLADREIHTTLLRLWR 136
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMSKAFPTLMETLV 321
+ W KIKL + + F ED++ L++M DMLT + E+S+ P L+
Sbjct: 137 GVSFWGKIKLFFQIVLTMF---DTEDVSEEELEKMKSQDMLTAALNELSQVSPKFKSILI 193
Query: 322 HERDQYMSSTLLKVATE-HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSAL 380
ERDQY++ K+ T + VVAV+G GH+ GIK K+ HDL + P +
Sbjct: 194 DERDQYLAE---KIKTAPGNKVVAVLGAGHVPGIK---KELYHKHDLAQLSQVPPTSKII 247
Query: 381 KVLSSLGVAVAGVAIISGIY 400
K++ + G+ + +AII+ +
Sbjct: 248 KII-AWGIPLLILAIIASTF 266
>gi|340726746|ref|XP_003401714.1| PREDICTED: traB domain-containing protein-like [Bombus terrestris]
Length = 426
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 161/331 (48%), Gaps = 33/331 (9%)
Query: 93 LGDEVR---DESSDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVG 149
+G ++R S+ ++ A + E + E+LP +V +LT T EGG +YLVG
Sbjct: 82 VGHQLRFSTQNESNYKSSDIAAFIQPEYDASIDEKLPETVTLLT---TPEGGK--LYLVG 136
Query: 150 TAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---------TPQNLKVPTVGEMVD 200
TAH S ES +V II ++P +V +ELC +R+ ++ +L + ++ E +
Sbjct: 137 TAHFSVESQNDVAMIIQAVQPHIVVVELCKTRIGVININEEALYRNATDLSIKSLTETIR 196
Query: 201 MWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRR 259
+ + I+ ++ V L + PG EFR AFEEA K +I L DR + +T +R
Sbjct: 197 HYGVYNGLLHIMLYRMVSHVVKQLGMPPGGEFRTAFEEAKKVPNCIIQLADRSINVTFQR 256
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
++ W IKL + + + S +D+ R ++ ++ +I + + +P + T
Sbjct: 257 ALRQLSWWEIIKLAW-LMVRLDSRISKQDVERYKRKC----VIQQMISSLREEYPAIERT 311
Query: 320 LVHERDQYMSSTL-LKVATEHSS-------VVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
V ERD Y++ L + A +H++ +V VVG GH+ GI W + V D+ I
Sbjct: 312 FVTERDIYLTYHLQMATAAQHTAEGLKPPRIVGVVGIGHIDGIVENWGK-VKASDIWPII 370
Query: 372 SPKPAVSALKVLS-SLGVAVAGVAIISGIYI 401
P + K+L ++ ++ G I G I
Sbjct: 371 RVPPQPLSSKILKFTIKASLLGATIYMGYKI 401
>gi|307177042|gb|EFN66316.1| TraB domain-containing protein [Camponotus floridanus]
Length = 456
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 129/262 (49%), Gaps = 29/262 (11%)
Query: 121 LPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSS 180
+ E+LP +V +L T++GG +YLVGTAH S ES +V +I ++P +V +ELC +
Sbjct: 138 IDEKLPETVTLL---RTSDGGK--LYLVGTAHFSVESQNDVSKVIQAVRPHIVVVELCRA 192
Query: 181 RVSMLTPQN------LKVPTVGEMVDMWKKKHNTFGILYSWFL---AKVASHLEIFPGSE 231
RV +L K M+D KK+ G+L+ L VA L + PG E
Sbjct: 193 RVGILQLDEEVMFRYAKDIDFRVMMDTIKKEGLYNGLLHILLLRMATHVAKQLGMPPGGE 252
Query: 232 FRVAFEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN 290
FR AFEEA K ++ L DRP+ IT++R + W IKL + P ++
Sbjct: 253 FRRAFEEAKKVPNCIVHLADRPINITMQRAIRSLSWWQTIKL--GWHLATMKDPITQEDV 310
Query: 291 RMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEH---------SS 341
+ K+ ML +I M + FP L E LV ERD Y++++L H +
Sbjct: 311 ELCKQR---SMLDEMIASMKEQFPVLGEVLVKERDIYLTNSLQLACLPHRTANHTFEPAR 367
Query: 342 VVAVVGKGHLQGIKNYWKQPVP 363
VV +VG GH GI W + P
Sbjct: 368 VVGIVGLGHTPGIIENWGKVKP 389
>gi|203287862|ref|YP_002222877.1| pheromone shutdown protein [Borrelia recurrentis A1]
gi|201085082|gb|ACH94656.1| pheromone shutdown protein [Borrelia recurrentis A1]
Length = 402
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 140/250 (56%), Gaps = 25/250 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML--TPQNLKVPTVGEMVDMW 202
+Y++GTAHVSK+S ++ +ID LKP + +EL +R + T +N K + D++
Sbjct: 25 IYVLGTAHVSKKSSQDTANLIDILKPNFIAVELDEARYHAILQTDENEKWRNL----DIY 80
Query: 203 K--KKHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
K K+ F I+ S F K+A I PG E + A +A ++ +IL DR V+ T
Sbjct: 81 KVIKQGKAFLLIVQIILSNFQKKLAKEQGISPGEEMKTAILKAKEHNIPLILADRKVETT 140
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
L+R W +P++ K K++ S LF + ED LKE D L+ +++E++K PT+
Sbjct: 141 LKRAWNCVPIFEKTKIISS-LFSFSDIKVTEDEIEKLKEQ---DALSNIMEELAKEIPTV 196
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ------PVPVHDLMTI 370
+ L+ ERD++++S +L+ + +++AVVG GH++GI K+ + + +L TI
Sbjct: 197 KKVLIDERDEFIASKILEGS---GTILAVVGAGHVKGIIENLKEIQDTKKIINIEELNTI 253
Query: 371 PSPKPAVSAL 380
P ++S L
Sbjct: 254 PKNNFSISKL 263
>gi|219129407|ref|XP_002184881.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403666|gb|EEC43617.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 452
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 133/256 (51%), Gaps = 38/256 (14%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-------PQNLKVPTVG 196
+++L+GTAHVS +S EV+ ++ + P +F+ELC +R+ +L +
Sbjct: 150 EIFLLGTAHVSSDSSEEVKLLLRHVHPDAIFVELCEARIPLLEGTAKDEHEEEALAHQNR 209
Query: 197 EMVDMWKKKHNTFG---------ILYSWFLAKVASHLEIFPGSEFRVAFE-----EAMKY 242
M + ++ +T G +L + AS L + G EFR A++ +++
Sbjct: 210 TMREKIRQVQSTQGGSRLQALSTVLLTSVQEDYASELGVELGGEFRAAYQYWQAQQSIPT 269
Query: 243 GGK-----VILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEM- 296
G +ILGDRP+Q+TL R WE + W K+K+L L+ ++ P E++ L+ +
Sbjct: 270 GTSSQSCALILGDRPLQLTLVRAWESLGFWPKVKVLLGLLWSSWQKPKKEEIQEWLQSVL 329
Query: 297 -DDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLK----------VATEHSSVVAV 345
D+ D+LT ++E+ + FPTL ++ ERD ++++ L++ A+ +VVA+
Sbjct: 330 RDETDVLTESLKELRRHFPTLFTVIIAERDAWLAAKLVQSCRVLSASATAASPVCTVVAI 389
Query: 346 VGKGHLQGIKNYWKQP 361
VG GH+ GI + P
Sbjct: 390 VGAGHIPGIVAWLTTP 405
>gi|346468081|gb|AEO33885.1| hypothetical protein [Amblyomma maculatum]
Length = 362
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 140/274 (51%), Gaps = 32/274 (11%)
Query: 78 EEFVHVDPLSESIVSLGDEVRDESSD-------RDETNGAVPVPEETKKVLPE--ELPRS 128
EE D +S S +V+ ES RD + VP K+V E ELP +
Sbjct: 3 EETADGDSEEDSFASRDTDVQSESESEGLELCGRDARH---TVPVTVKRVRKENPELPET 59
Query: 129 VVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQ 188
V +L T EG VYLVGTAH S ES +V + +P +V +ELC SR+++L+
Sbjct: 60 VTVL---KTQEGSI--VYLVGTAHFSLESQEDVAKTVQETQPDIVLIELCKSRLNILSFD 114
Query: 189 NLKVPTVGEMVDMWKK----KHNTF--GILYSWFL---AKVASHLEIFPGSEFRVAFEEA 239
+ + ++M K K N GI+Y L A + L + PG EFR A +EA
Sbjct: 115 EEVILRESQSMNMEKMMTTIKQNGLVQGIMYILLLSMSAHLTRQLGMAPGGEFRRAVQEA 174
Query: 240 MKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDD 298
K G +I LGDRP+QITL+R + +W K++L + + A S E++ R K+
Sbjct: 175 EKVKGCLIHLGDRPLQITLQRALAALTVWQKLRLAW-HMITAKEPISKEEVERCKKQ--- 230
Query: 299 VDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL 332
D+L ++ EM+ FP L + VHERD Y++ +L
Sbjct: 231 -DLLEEMLAEMTGEFPALSKVFVHERDIYLAYSL 263
>gi|340383371|ref|XP_003390191.1| PREDICTED: traB domain-containing protein-like [Amphimedon
queenslandica]
Length = 283
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 134/263 (50%), Gaps = 39/263 (14%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP +V +L C + ++ VYLVGTAH SKES +V+ I ++P+ +L +V
Sbjct: 4 LPDTVSVLDCPNGSK-----VYLVGTAHFSKESATDVQKTIQQVRPEFDTKDLNWEKVRA 58
Query: 185 LTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFL---AKVASHLEIFPGSEFRVAFEEAMK 241
+V G+ ++ F+ A + L + PG EFR+ F+E K
Sbjct: 59 FMASEGQVA----------------GLTHAVFIKISANLMDKLGVAPGGEFRMGFQEGTK 102
Query: 242 YGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYS-FLFQAFFLP-SAEDLNRMLKEMDDV 299
G ++LGDR +++T +R +P+W +++L Y F AF L S ED+ +M K D V
Sbjct: 103 VGSTILLGDRSIRMTFKRALRALPIWQQLRLFYMLFTSVAFDLDISPEDIEKM-KNSDMV 161
Query: 300 DMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVAT-------EHSSVVAVVGKGHLQ 352
+MLT E++ P L V+ERD ++++L+ A ++V +VG GH+
Sbjct: 162 EMLT---GELAAELPALSHVFVNERDLVLANSLMAAANCLIEPYAPPVTIVGIVGIGHVN 218
Query: 353 GIKNYW--KQPVPVHDLMTIPSP 373
GIK +W ++ + L+T+ P
Sbjct: 219 GIKEHWMKEEARDISKLLTLSPP 241
>gi|288930561|ref|YP_003434621.1| TraB family protein [Ferroglobus placidus DSM 10642]
gi|288892809|gb|ADC64346.1| TraB family protein [Ferroglobus placidus DSM 10642]
Length = 399
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 122/220 (55%), Gaps = 14/220 (6%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
VY+VGTAHVS++S EV +I ++P+ V +EL R L + ++ +VD+ K+
Sbjct: 5 VYIVGTAHVSQKSVEEVRKVIREVQPKAVAVELDEKRFRALMGEKQEI----NVVDVVKR 60
Query: 205 KH-NTF--GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTW 261
+TF + S+ K+ + PG+E A EEA G V+L DR + IT+RR
Sbjct: 61 GDISTFLLTVFLSFLQKKLGEEKGLTPGTEMLAAIEEAKNVGADVLLIDRDLGITMRRFL 120
Query: 262 EKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLV 321
+ + + KIKL + F+ F ED++ + E+ + D+ ++++E + P + LV
Sbjct: 121 DSLSFFEKIKLFFHFVKGMF-----EDVD--VDELIEKDLTEILVEEFRRVSPNAAKVLV 173
Query: 322 HERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP 361
ERD +M+ L++ A + +VAVVG GH +GI+ Y +P
Sbjct: 174 DERDAFMAYNLIRAAERYEKIVAVVGAGHKKGIERYLSKP 213
>gi|134046423|ref|YP_001097908.1| TraB family protein [Methanococcus maripaludis C5]
gi|132664048|gb|ABO35694.1| TraB family protein [Methanococcus maripaludis C5]
Length = 380
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 121/222 (54%), Gaps = 14/222 (6%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPTVGEMVDM 201
C++ LVGTAHVS +S EV+ I P++V +EL R V+M QN K ++ +
Sbjct: 12 CNIRLVGTAHVSDDSITEVKNAIVETDPELVAIELDKDRFVAMF--QNKKNDV--DLKSV 67
Query: 202 WKKKHNTFGILYSW---FLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K+ I++S F + I PGSE + A + A++Y + L DRP+ ITL
Sbjct: 68 IKQGKVGIYIVHSILANFQKNIGEQFGIKPGSEMKKATDLAIQYQKPISLIDRPINITLS 127
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
RT KM K + L + + +N M+ DD L L+++++S P++ E
Sbjct: 128 RTVNKMTFKEKFDFVIGLLTEQNVELDEKAINEMVSNADD---LILLLKDIS---PSIYE 181
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
TLV+ERD+YM+ L + + ++VAVVG GH+ GIKNY K+
Sbjct: 182 TLVNERDKYMAKNLFEASKGKENIVAVVGAGHVPGIKNYLKK 223
>gi|223986498|ref|ZP_03636498.1| hypothetical protein HOLDEFILI_03813 [Holdemania filiformis DSM
12042]
gi|223961528|gb|EEF66040.1| hypothetical protein HOLDEFILI_03813 [Holdemania filiformis DSM
12042]
Length = 390
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 140/264 (53%), Gaps = 15/264 (5%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMW 202
++ L+GTAHVSK S ++V+ ++ ++P + +EL R S++ P + + +++
Sbjct: 14 EITLIGTAHVSKVSAQQVKEALEEIQPDSICVELDEDRYQSLMHPGQWEQTDIVQVI--- 70
Query: 203 KKKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K+K F I+ S + K+A ++I G+E + A + +++L DR +Q T R
Sbjct: 71 KQKKTGFLLANIILSSYQKKIAKKMDISAGAEMMQGIQSAKELNAELVLADRRIQTTFSR 130
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLME 318
W K W K KLL S +F F ED+ L+++ DML ++E+ +FP + +
Sbjct: 131 IWRKHSFWQKCKLLTSIVFSLF---DDEDITEADLEQLKQSDMLESALKEVGDSFPVVAD 187
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVS 378
L+HERDQY+++ + + + VVAV+G H+ G+ + + DL + S P
Sbjct: 188 VLIHERDQYLATKIAQ--AKGPKVVAVLGAAHVPGVSAL-IESGKLADLNELDSLPPKSI 244
Query: 379 ALKVLSSLGVAVAGVAIISGIYIN 402
KV+ G+ +A VA++ ++N
Sbjct: 245 WGKVI-GWGIPIAIVALVCATFLN 267
>gi|350424611|ref|XP_003493853.1| PREDICTED: traB domain-containing protein-like [Bombus impatiens]
Length = 426
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 156/324 (48%), Gaps = 35/324 (10%)
Query: 102 SDRDETNG-----AVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKE 156
S +ETN A + E + E+LP +V +LT T EGG +YLVGTAH S E
Sbjct: 89 STHNETNYKSSDIAAFIQPEYDASIDEKLPETVTLLT---TPEGGK--LYLVGTAHFSVE 143
Query: 157 SCREVEAIIDFLKPQVVFLELCSSRVSML---------TPQNLKVPTVGEMVDMWKKKHN 207
S +V II ++P +V +ELC +R+ ++ +L + ++ E + + +
Sbjct: 144 SQNDVAMIIQAVQPHIVAVELCKTRIDVININEEALYRNATDLSIKSLTETIRHYGAYNG 203
Query: 208 TFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRRTWEKMPL 266
I+ + V L + PG EFR AFEEA K +I L DR + +T +R ++
Sbjct: 204 LLHIMLYRMVNHVVKQLGMPPGGEFRTAFEEAKKVPNCIIQLADRSINVTFQRALRELSW 263
Query: 267 WHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQ 326
W IKL + + + + +D+ R ++ ++ +I + + +P + T V ERD
Sbjct: 264 WEIIKLAW-LMVRLDSRINKQDVERYKRKC----VIQQMISSLREEYPAIERTFVTERDM 318
Query: 327 YMSSTL-LKVATEHSS-------VVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVS 378
Y++ L + A +H++ +V VVG GH+ GI W + V D+ I P
Sbjct: 319 YLTYHLQMATAAQHTAEGLKPPRIVGVVGIGHINGIVKNWGK-VKASDIWPIIRVPPQPL 377
Query: 379 ALKVLS-SLGVAVAGVAIISGIYI 401
+ K+L ++ ++ G I G I
Sbjct: 378 SSKILKFTIKASLLGATIYMGYKI 401
>gi|226467794|emb|CAX69773.1| TraB domain-containing protein [Schistosoma japonicum]
Length = 409
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 119/230 (51%), Gaps = 17/230 (7%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
ELP +V ++ C++ C VYL+GTAH S+ES +V+ +++ + P +V LELC +R
Sbjct: 45 ELPETVSVIECENH-----CKVYLIGTAHFSEESINDVKNVMELVHPDIVVLELCPNRSQ 99
Query: 184 MLT--PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASH----LEIFPGSEFRVAFE 237
LT +N+K + + H + + L ++ + L + PG EFR A
Sbjct: 100 TLTMDEENIKKQLKDISITSVIRSHGVSSGVLHYLLLRLNGYLVDTLGMAPGGEFRAAAN 159
Query: 238 EAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEM 296
EAMK ++LGDRPV ITL R E M W K+K + LF F P ++ ++EM
Sbjct: 160 EAMKQPHCHIVLGDRPVNITLYRALETMGPWTKLKFFLALLFS--FQPVTKE---QIEEM 214
Query: 297 DDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVV 346
D L ++ M+ P L L+ ERDQY++ ++ + + + A V
Sbjct: 215 KKADFLEKLLVSMAGEHPELTHILLDERDQYLARSIWETTGMEAYIKAQV 264
>gi|357614992|gb|EHJ69414.1| hypothetical protein KGM_16384 [Danaus plexippus]
Length = 391
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 163/332 (49%), Gaps = 36/332 (10%)
Query: 86 LSESIVSLGDEVRDESSDRDETNGAVPVPEETKKVLPEE-LPRSVVILTCDSTAEGGTCD 144
LS+ V++ D ++S D ++ + + T V P+ LP +V +L +GG
Sbjct: 70 LSDDTVNIAD--GNDSQDSEKKSAI----DSTTDVEPDNGLPNTVTVL---DAPDGGK-- 118
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK- 203
+YLVGTAH S ES +V +I + P +V +ELC R ++L + + +++ K
Sbjct: 119 IYLVGTAHFSLESQEDVSKVIQKVCPHIVMVELCEQRTNILLLDEEVILREAKNINIAKI 178
Query: 204 ----KKHNTF-GILYSWFL---AKVASHLEIFPGSEFRVAFEEAMKYGGKVI-LGDRPVQ 254
++ F G++Y L A + L + PG EFR A EA K VI LGDR +
Sbjct: 179 RTTMAENGVFNGLMYILLLNMSAHITRELGMAPGGEFRRAMAEAKKIPNCVIQLGDRAID 238
Query: 255 ITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFP 314
ITL R + I+ ++ L + S E++ R ++ DML +EM++ FP
Sbjct: 239 ITLHRAISSLTWGQTIRFIWHLLTSNQTI-SLEEVERCKQKKLLEDML----EEMAEEFP 293
Query: 315 TLMETLVHERDQYMSSTL----LKVATEHSSVVAVVGKGHLQGIKNYWKQ--PVPVHDLM 368
L V ERD Y+S +L L+ E +V VVG GH+ GI +W + P + L+
Sbjct: 294 PLKRVFVVERDMYLSHSLQVAALQPRREPCRIVGVVGIGHVAGIVEHWGKISPQDIAPLL 353
Query: 369 TIPSPKPAVSALKVLSSLGVAVAGVAIISGIY 400
+P P + L+V + A AG A++ +Y
Sbjct: 354 KVPPPSVSTRVLRV--CVRAACAG-ALVYAVY 382
>gi|302813304|ref|XP_002988338.1| hypothetical protein SELMODRAFT_427029 [Selaginella moellendorffii]
gi|300144070|gb|EFJ10757.1| hypothetical protein SELMODRAFT_427029 [Selaginella moellendorffii]
Length = 335
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 124/252 (49%), Gaps = 39/252 (15%)
Query: 121 LPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSS 180
LP+++ +SV I+ S G VY+VGT+HVSK + E D + E
Sbjct: 88 LPKKMIKSVKIIHHISGETGLESTVYIVGTSHVSKGNSHSKE---DARSLAIKAREYPWK 144
Query: 181 RVSMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAM 240
V +L ++++V A LE+ PG EFR A+
Sbjct: 145 NVFLLPRKDVQV----------------------------AQRLEVSPGDEFRRAYNTGR 176
Query: 241 KYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVD 300
++ILGDR ITL+R + LW K+KL S L FLP + +M+ D
Sbjct: 177 ACNAEIILGDRLNSITLQRATAGLTLWQKMKLGGSLLLSIIFLP-------WVDKMELSD 229
Query: 301 MLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQG-IKNYWK 359
++ E K+FP+L+ L+ ERD +M+STL ++H+SVVAVVG+GH+ G I N+ K
Sbjct: 230 DTVKLLGEYVKSFPSLINALLTERDLFMTSTLRSACSKHASVVAVVGQGHVPGIIANWAK 289
Query: 360 QPVPVHDLMTIP 371
P+ V L+ +P
Sbjct: 290 PPIEVGALLEVP 301
>gi|219129409|ref|XP_002184882.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403667|gb|EEC43618.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 374
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 131/249 (52%), Gaps = 38/249 (15%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-------PQNLKVPTVG 196
+++L+GTAHVS +S EV+ ++ + P +F+ELC +R+ +L +
Sbjct: 44 EIFLLGTAHVSSDSSEEVKLLLRHVHPDAIFVELCEARIPLLEGTAKDEHEEEALAHQNR 103
Query: 197 EMVDMWKKKHNTFG---------ILYSWFLAKVASHLEIFPGSEFRVAFE-----EAMKY 242
M + ++ +T G +L + AS L + G EFR A++ +++
Sbjct: 104 TMCEKIRQVQSTQGGSRLQALSTVLLTSVQEDYASELGVELGGEFRAAYQYWQAQQSIPT 163
Query: 243 GGK-----VILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEM- 296
G +ILGDRP+Q+TL R WE + W K+K+L L+ ++ P E++ L+ +
Sbjct: 164 GTSSQSCALILGDRPLQLTLVRAWESLGFWPKVKVLLGLLWSSWQKPKKEEIQEWLQSVL 223
Query: 297 -DDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLK----------VATEHSSVVAV 345
D+ D+LT ++E+ + FPTL ++ ERD ++++ L++ A+ +VVA+
Sbjct: 224 RDETDVLTESLKELRRHFPTLFTVIIAERDAWLAAKLVQSCRVLSASATAASPVCTVVAI 283
Query: 346 VGKGHLQGI 354
VG GH+ GI
Sbjct: 284 VGAGHIPGI 292
>gi|195145816|ref|XP_002013886.1| GL23149 [Drosophila persimilis]
gi|194102829|gb|EDW24872.1| GL23149 [Drosophila persimilis]
Length = 954
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 21/220 (9%)
Query: 123 EELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV 182
+ LP +V +L +T G VYLVGTAH S+ES +V +I ++P VV +ELC SR+
Sbjct: 658 QNLPSTVTLL---NTPFGSK--VYLVGTAHFSEESQDDVSFVIRNVRPDVVMVELCPSRI 712
Query: 183 SMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFR 233
+L +N+ +P + ++ + F IL A++A L + PG EFR
Sbjct: 713 HILKLDEKTLLEEAKNINIPKIRGLIQTHGYINGVFFILMLQMSAQIAKDLGMAPGGEFR 772
Query: 234 VAFEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM 292
AFEE K G ++ LGDRP++IT+ R + LW +KL++ F S E++
Sbjct: 773 RAFEEIHKLPGCILHLGDRPIRITIYRALRALSLWQTMKLVWRLTFTDSI--SIEEVEEC 830
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL 332
K+ D+L ++QEM+ FP + V ERD ++ +L
Sbjct: 831 KKK----DLLEKLMQEMAGEFPAFSDVFVRERDLFLCHSL 866
>gi|226467792|emb|CAX69772.1| TraB domain-containing protein [Schistosoma japonicum]
Length = 409
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 119/230 (51%), Gaps = 17/230 (7%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
ELP +V ++ C++ C VYL+GTAH S+ES +V+ +++ + P +V LELC +R
Sbjct: 45 ELPETVSVIECENH-----CKVYLIGTAHFSEESINDVKKVMELVHPDIVVLELCPNRSQ 99
Query: 184 MLT--PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASH----LEIFPGSEFRVAFE 237
LT +N+K + + H + + L ++ + L + PG EFR A
Sbjct: 100 TLTMDEENIKKQLKDISITSVIRSHGVSSGVLHYLLLRLNGYLVDTLGMAPGGEFRAAAN 159
Query: 238 EAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEM 296
EAMK ++LGDRPV ITL R E M W K+K + LF F P ++ ++EM
Sbjct: 160 EAMKQPHCHIVLGDRPVNITLYRALETMGPWTKLKFFLALLFS--FQPVTKE---QIEEM 214
Query: 297 DDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVV 346
D L ++ +S P L L+ ERDQY++ ++ + + + A V
Sbjct: 215 KKADFLEKLLVSISGEHPELTHILLDERDQYLARSIWETTGMEAYIKAQV 264
>gi|374628671|ref|ZP_09701056.1| TraB family protein [Methanoplanus limicola DSM 2279]
gi|373906784|gb|EHQ34888.1| TraB family protein [Methanoplanus limicola DSM 2279]
Length = 403
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 128/239 (53%), Gaps = 12/239 (5%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
++ LVGTAHVS++S EV+A I+ +P V+ +EL R + ++ + P V E++
Sbjct: 2 SEIKLVGTAHVSRKSIDEVKAAIEEFEPDVIAVELDRPRFEAIKNKDTRAPDVSEILS-- 59
Query: 203 KKKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
N +L W LA K+ + + PG+E A EA + G + L DR ++ITL
Sbjct: 60 --GGNFSELLVQWLLAYVQKKIGMDVGVEPGAEMLAAINEAEERGIPIALADRDIRITLS 117
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEM-DDVDMLTLVIQEMSKAFPTLM 317
R M L+ K+KLL + E+++ + E+ + D++ I+E + P
Sbjct: 118 RFVSGMTLFEKVKLLVALAGAVTGKDGGEEID--IDELSQNKDLIEAAIEEFGRFSPGGA 175
Query: 318 ETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMT-IPSPKP 375
+ L+ ERD Y++ +LL ++ + V+ VVG GH++GI+ Y + P + ++ + + PKP
Sbjct: 176 KALIAERDAYLTHSLLNLSRNNEKVLGVVGAGHVKGIRKYMEDPSSLPEMASLVQKPKP 234
>gi|282165222|ref|YP_003357607.1| TraB family protein [Methanocella paludicola SANAE]
gi|282157536|dbj|BAI62624.1| TraB family protein [Methanocella paludicola SANAE]
Length = 415
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 134/252 (53%), Gaps = 20/252 (7%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP--QNLKVPTVGEMVDM 201
++ LVGTAHVS++S +EVE I+ KP VV +EL R +L Q K + E++
Sbjct: 3 NIMLVGTAHVSEKSVKEVEEAIEAYKPDVVAVELDIRRARVLKEGDQGQKEIPIKELL-- 60
Query: 202 WKKKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
K +N L LA KV + + + PGSE A E A G V+ DR + ITL
Sbjct: 61 --KGNNLALFLMQTLLAFVQRKVGAEMGVKPGSEMLAAIEAANARGLGVVYIDRDLGITL 118
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLPSAE-DLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
R W KM K ++ YS + + + + + D+ ++ +E D+++ +I+E+ + P++
Sbjct: 119 ARFWAKMSFREKFRMFYSLVLASLGIGTKDVDIEQITQE----DVVSSLIEELREFTPSV 174
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPV---PVHDLMTIPSP 373
E LV ERD Y++ LL++ + VV VVG GH +GI+ Y + P P+ + +P
Sbjct: 175 AEVLVDERDAYLAHNLLEIG-KTKRVVGVVGAGHREGIRKYLEHPETIPPIASISDVPK- 232
Query: 374 KPAVSALKVLSS 385
K + LK+ S
Sbjct: 233 KRHIPWLKIFSG 244
>gi|219684552|ref|ZP_03539495.1| pheromone shutdown protein [Borrelia garinii PBr]
gi|219671914|gb|EED28968.1| pheromone shutdown protein [Borrelia garinii PBr]
Length = 404
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 140/266 (52%), Gaps = 19/266 (7%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML--TPQNLKVPTVGEMVDMW 202
+Y++GTAHVSK+S + +I+ LKP + +EL +R + T +N K + +D
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTDENEKWRNLD--IDKA 84
Query: 203 KKKHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K+ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+
Sbjct: 85 LKQGKAFFLIINIILSNFQKKLAKEQGIQPGEEMKTAILKAKKHNIPLILADRKIETTLK 144
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R W +P++ KIK++ S F L + ++++ + D L+ V++E+SK P + +
Sbjct: 145 RAWISIPIFEKIKIISSL----FSLTDTKITKDEIEKLKEQDALSKVMEELSKEIPQVKK 200
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS----PK 374
L+ ERD+++++ +L+ V+AVVG GH+ GI N K+ ++ I PK
Sbjct: 201 VLIDERDEFITNKILEGT---GIVLAVVGAGHVNGIMNTLKEISQNKKIINIEELDKIPK 257
Query: 375 PAVSALKVLSSLGVAVAGVAIISGIY 400
S KVLS L + I+S Y
Sbjct: 258 KHFSFSKVLSYLIAISIILLIVSSFY 283
>gi|150400030|ref|YP_001323797.1| TraB family protein [Methanococcus vannielii SB]
gi|150012733|gb|ABR55185.1| TraB family protein [Methanococcus vannielii SB]
Length = 380
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 123/232 (53%), Gaps = 20/232 (8%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPTVGEMVDM 201
C++ LVGTAHVS +S VE I + P++V +EL R +SML QN K E VD+
Sbjct: 12 CEIRLVGTAHVSDDSIAYVENAIIEMDPELVAIELDKDRFISML--QNKK-----ENVDL 64
Query: 202 WKK-KHNTFGI-----LYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQI 255
K GI + + F + I PGSE + A E A++Y + L DRP+ I
Sbjct: 65 KAVIKQGKVGIFLIHSILANFQKNIGEQFGIKPGSEMKKATELAIQYQKPISLIDRPIGI 124
Query: 256 TLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPT 315
TL RT KM K + L L + + +N M++ +D + L+++++S P+
Sbjct: 125 TLSRTVSKMSFKEKFRFLLGLLTEKNVELDEKAINEMVENAED---MILILKDIS---PS 178
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDL 367
+ TLV ERD+YM+ + + + ++AVVG GHL GIK Y K+ H++
Sbjct: 179 IYLTLVDERDKYMAKNIFEASKGKERILAVVGAGHLAGIKKYLKELESGHEI 230
>gi|219852149|ref|YP_002466581.1| TraB family protein [Methanosphaerula palustris E1-9c]
gi|219546408|gb|ACL16858.1| TraB family protein [Methanosphaerula palustris E1-9c]
Length = 398
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 134/268 (50%), Gaps = 16/268 (5%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
+V L+GTAHVS+ES EV A ID P V+ +EL + R + L Q + P V +++
Sbjct: 3 EVRLIGTAHVSQESVDEVLAEIDAFTPDVIAVELDAGRYAGLKKQG-EAPEVDDIL---- 57
Query: 204 KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K N +L W L K+ + + PG+E + A + A + G ++ L DR + ITL+R
Sbjct: 58 KGGNFNQLLIQWVLGYIQRKIGMDVGVEPGAEMKAAIQAAEERGVQIGLIDRDIGITLQR 117
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
W M +W K K++Y+ + E LK+ D+++ ++E K P +
Sbjct: 118 FWGGMTIWEKCKMIYALGASLIGVDEGEIDIESLKQQ---DVISAALEEFRKFSPNGAKA 174
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPV---PVHDLMTIPSPKPA 376
L+ ERD Y++ ++ ++ V+ V+G GH +GI+ Y P P+ DL T P
Sbjct: 175 LIDERDAYLAHQIIGLSGRFERVLVVIGAGHRKGIEGYLLDPASLPPMADLTTKAKSYPW 234
Query: 377 VSALKVLSSLGVAVAGVAII-SGIYINC 403
+ ++ L A + II SG+ N
Sbjct: 235 GKIIGIVMILMFAFILITIIFSGVGFNV 262
>gi|355571262|ref|ZP_09042514.1| TraB family protein [Methanolinea tarda NOBI-1]
gi|354825650|gb|EHF09872.1| TraB family protein [Methanolinea tarda NOBI-1]
Length = 404
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 121/225 (53%), Gaps = 14/225 (6%)
Query: 142 TCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDM 201
T + +VGTAHVS +S EV + I+ P++V +EL +R + L Q + P+V ++++
Sbjct: 5 TGTLRIVGTAHVSAKSVEEVRSAIEEFSPEIVAIELDPARYAALKKQA-RDPSVKDVLE- 62
Query: 202 WKKKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
N +L W LA ++ + + PG+E + A EEA K V L DR + ITL
Sbjct: 63 ---AKNFTQLLVQWILAYLQRRIGLDMGVEPGAEMKAAIEEAEKRNIPVALIDRDIGITL 119
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLPSAE-DLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
RR W + + K+KLLY+ + + S E D+ + KE D++++ ++E K P
Sbjct: 120 RRFWNSLSFFEKLKLLYALVLSLATVDSEEIDVEELKKE----DVVSMAMKEFRKFSPNG 175
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP 361
L+ ERD Y++ L + H+ ++AV+G GH+ G++ P
Sbjct: 176 ARALIDERDSYLAHNLAILKERHTRILAVLGAGHVAGVEKLLASP 220
>gi|322800152|gb|EFZ21237.1| hypothetical protein SINV_00751 [Solenopsis invicta]
Length = 758
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 169/390 (43%), Gaps = 74/390 (18%)
Query: 62 NDPNFPKMDPNPPESGEEFVHVDPLSESIVSLGDEVRDESSDRDETNGAVPVPEETKKVL 121
++PN + S E + VD S +I + G D SD +P E +
Sbjct: 84 DNPNDDNKMKSTESSDNEIILVDEDS-NIQNKGYSTGDSVSD-------LPRIREYDSTI 135
Query: 122 PEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR 181
E LP +V +LT EGG +YLVGTAH S ES +V II ++P +V +ELC +R
Sbjct: 136 DERLPETVTLLT---APEGGK--LYLVGTAHFSIESQNDVSKIIQAVQPHIVAVELCRAR 190
Query: 182 VSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFL---AKVASHLEIFPG 229
V +L +N+ T+ +D K++ G+L+ L A VA L + PG
Sbjct: 191 VGILQLDEKVMFSYAKNIDYKTI---MDTIKREGLYNGLLHILLLRMAAHVAKQLGMPPG 247
Query: 230 SEFRVAFEEAMKY-----------------------------GGKVILGDRPVQITLRRT 260
EFR AFEE Y V L DRP+ IT++R
Sbjct: 248 GEFRRAFEEVSTYIIEIAHYLSCNFCAFFCTQQIQSTAKNVPNCIVHLADRPINITMQRA 307
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
+ W IKL + P ++ + K+ ML +I M + FP L E
Sbjct: 308 IRLLSWWQTIKLGWHLAVMKD--PITQEDVELCKQR---SMLDEMIASMKEQFPVLGEVF 362
Query: 321 VHERDQYMSSTLLKVATEHSS-------VVAVVGKGHLQGIKNYWKQ--PVPVHDLMTIP 371
V ERD +++++ L++A H + VV +VG GH GI W + P + +M +P
Sbjct: 363 VKERDIFLTNS-LQMACNHVTYSFEPVRVVGIVGLGHTPGIIENWGKVNPTDIPPMMRVP 421
Query: 372 SPKPAVSALKVLSSLGVAVAGVAIISGIYI 401
P + LK ++ ++ G I G I
Sbjct: 422 PPSLSGKILKF--TIKASILGAVIYVGYKI 449
>gi|194901572|ref|XP_001980326.1| GG17082 [Drosophila erecta]
gi|190652029|gb|EDV49284.1| GG17082 [Drosophila erecta]
Length = 532
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 139/278 (50%), Gaps = 33/278 (11%)
Query: 116 ETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFL 175
+T + + LP +V +L +T G VYLVGTAH S+ES +V +I ++P VV +
Sbjct: 229 DTIEEFEQNLPSTVTLL---NTPFGSK--VYLVGTAHFSEESQDDVSYVIRNVRPDVVMV 283
Query: 176 ELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEI 226
ELC SR+ +L +++ +P + ++ + F IL A++A L +
Sbjct: 284 ELCPSRIHILKLDEKTLLEEAKSINIPKIRGILHTHGYINGIFFILLLQMSAQIAKDLGM 343
Query: 227 FPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPS 285
PG EFR AFEE K G ++ LGDRP++ITL R + LW +KL++ F S
Sbjct: 344 APGGEFRRAFEEIHKLPGCILHLGDRPIRITLYRALRALSLWQTMKLVWRLTFTDSI--S 401
Query: 286 AEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVA- 344
E+ ++E D+L ++QEM+ FP + V ERD ++ +L A ++ A
Sbjct: 402 IEE----VEECKQSDLLEKLMQEMAGEFPAFSDVFVRERDLFLCHSLQLAALPQAAPGAQ 457
Query: 345 ---------VVGKGHLQGIKNYWKQ--PVPVHDLMTIP 371
VVG GH GI W P+ + ++ IP
Sbjct: 458 QIRPVRVVGVVGIGHANGIAKMWGNVDPMKIPAILEIP 495
>gi|219685414|ref|ZP_03540232.1| pheromone shutdown protein [Borrelia garinii Far04]
gi|219672970|gb|EED29991.1| pheromone shutdown protein [Borrelia garinii Far04]
Length = 404
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 134/250 (53%), Gaps = 19/250 (7%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML--TPQNLKVPTVGEMVDMW 202
+Y++GTAHVSK+S + +I+ LKP + +EL +R + T +N K + +D
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTDENEKWRNLD--IDKA 84
Query: 203 KKKHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K+ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+
Sbjct: 85 LKQGKAFFLIINIILSNFQKKLAKEQGIQPGEEMKTAILKAKKHNIPLILADRKIETTLK 144
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R W +P++ KIK++ S F L + ++++ + D L+ V++E+SK P + +
Sbjct: 145 RAWISIPIFEKIKIISSL----FSLTDTKITKDEIEKLKEQDALSKVMEELSKEIPQVKK 200
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS----PK 374
L+ ERD+++++ +L+ V+AVVG GH+ GI N K+ ++ I PK
Sbjct: 201 VLIDERDEFITNKILEGT---GIVLAVVGAGHVNGIMNTLKEISQNKKIINIEELDKIPK 257
Query: 375 PAVSALKVLS 384
S KVLS
Sbjct: 258 KHFSFSKVLS 267
>gi|21357445|ref|NP_650253.1| CG12360, isoform A [Drosophila melanogaster]
gi|24646455|ref|NP_731765.1| CG12360, isoform B [Drosophila melanogaster]
gi|7299711|gb|AAF54893.1| CG12360, isoform A [Drosophila melanogaster]
gi|17944306|gb|AAL48046.1| RE12073p [Drosophila melanogaster]
gi|23175970|gb|AAN14341.1| CG12360, isoform B [Drosophila melanogaster]
gi|220947874|gb|ACL86480.1| CG12360-PA [synthetic construct]
gi|220957178|gb|ACL91132.1| CG12360-PA [synthetic construct]
Length = 532
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 139/278 (50%), Gaps = 33/278 (11%)
Query: 116 ETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFL 175
+T + + LP +V +L +T G VYLVGTAH S+ES +V +I ++P VV +
Sbjct: 229 DTIEEFEQNLPSTVTLL---NTPFGSK--VYLVGTAHFSEESQDDVSYVIRNVRPDVVMV 283
Query: 176 ELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEI 226
ELC SR+ +L +++ +P + ++ + F IL A++A L +
Sbjct: 284 ELCPSRIHILKLDEKTLLEEAKSINIPKIRGILHTHGYINGIFFILLLQMSAQIAKDLGM 343
Query: 227 FPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPS 285
PG EFR AFEE K G ++ LGDRP++ITL R + +W +KL++ F S
Sbjct: 344 APGGEFRRAFEEIHKLPGCILHLGDRPIRITLYRALRALSMWQTMKLVWRLTFTDSI--S 401
Query: 286 AEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSS---- 341
E+ ++E D+L ++QEM+ FP + V ERD ++ +L A ++
Sbjct: 402 IEE----VEECKQSDLLEKLMQEMAGEFPAFSDVFVRERDVFLCHSLQLAALPQAAPGGQ 457
Query: 342 ------VVAVVGKGHLQGIKNYWK--QPVPVHDLMTIP 371
VV VVG GH GI W P + ++ IP
Sbjct: 458 QVRPVRVVGVVGIGHANGIAKMWGTVDPKKIPAILEIP 495
>gi|195329372|ref|XP_002031385.1| GM25964 [Drosophila sechellia]
gi|194120328|gb|EDW42371.1| GM25964 [Drosophila sechellia]
Length = 532
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 139/278 (50%), Gaps = 33/278 (11%)
Query: 116 ETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFL 175
+T + + LP +V +L +T G VYLVGTAH S+ES +V +I ++P VV +
Sbjct: 229 DTIEEFEQNLPSTVTLL---NTPFGSK--VYLVGTAHFSEESQDDVSYVIRNVRPDVVMV 283
Query: 176 ELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEI 226
ELC SR+ +L +++ +P + ++ + F IL A++A L +
Sbjct: 284 ELCPSRIHILKLDEKTLLEEAKSINIPKIRGILHTHGYINGIFFILLLQMSAQIAKDLGM 343
Query: 227 FPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPS 285
PG EFR AFEE K G ++ LGDRP++ITL R + +W +KL++ F S
Sbjct: 344 APGGEFRRAFEEIHKLPGCILHLGDRPIRITLYRALRALSMWQTMKLVWRLTFTDSI--S 401
Query: 286 AEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSS---- 341
E+ ++E D+L ++QEM+ FP + V ERD ++ +L A ++
Sbjct: 402 IEE----VEECKQSDLLEKLMQEMAGEFPAFSDVFVRERDVFLCHSLQLAALPQAAPGGQ 457
Query: 342 ------VVAVVGKGHLQGIKNYWK--QPVPVHDLMTIP 371
VV VVG GH GI W P + ++ IP
Sbjct: 458 QVRPVRVVGVVGIGHANGIAKMWGTVDPKKIPAILEIP 495
>gi|195571267|ref|XP_002103625.1| GD20525 [Drosophila simulans]
gi|194199552|gb|EDX13128.1| GD20525 [Drosophila simulans]
Length = 532
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 138/278 (49%), Gaps = 33/278 (11%)
Query: 116 ETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFL 175
+T + + LP +V +L ++ VYLVGTAH S+ES +V +I ++P VV +
Sbjct: 229 DTIEEFEQNLPSTVTLLNTPFGSK-----VYLVGTAHFSEESQDDVSYVIRNVRPDVVMV 283
Query: 176 ELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEI 226
ELC SR+ +L +++ +P + ++ + F IL A++A L +
Sbjct: 284 ELCPSRIHILKLDEKTLLEEAKSINIPKIRGILHTHGYINGIFFILLLQMSAQIAKDLGM 343
Query: 227 FPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPS 285
PG EFR AFEE K G ++ LGDRP++ITL R + +W +KL++ F S
Sbjct: 344 APGGEFRRAFEEIHKLPGCILHLGDRPIRITLYRALRALSMWQTMKLVWRLTFTDSI--S 401
Query: 286 AEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSS---- 341
E+ ++E D+L ++QEM+ FP + V ERD ++ +L A ++
Sbjct: 402 IEE----VEECKQSDLLEKLMQEMAGEFPAFSDVFVRERDVFLCHSLQLAALPQAAPGGQ 457
Query: 342 ------VVAVVGKGHLQGIKNYWK--QPVPVHDLMTIP 371
VV VVG GH GI W P + ++ IP
Sbjct: 458 QVRPVRVVGVVGIGHANGIAKMWGTVDPKKIPAILEIP 495
>gi|389845337|ref|YP_006347417.1| pheromone shutdown-related protein TraB [Mesotoga prima
MesG1.Ag.4.2]
gi|387860083|gb|AFK08174.1| pheromone shutdown-related protein TraB [Mesotoga prima
MesG1.Ag.4.2]
Length = 389
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 111/195 (56%), Gaps = 13/195 (6%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN-LKVPTVGEMVDMW 202
++ ++GTAHVSK S EV+AII+ KP V +ELC+SR + Q+ K + ++V
Sbjct: 14 ELIIIGTAHVSKNSAEEVKAIIEEEKPDSVAIELCNSRYQSIQDQDKWKKTDIAKVV--- 70
Query: 203 KKKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K+ +F +L + L+ ++A + I G E A E A + G +++L DR +Q+T
Sbjct: 71 -KEKKSFLLLANLILSSYQKRMAKQIGIQAGQEMLQAIESAKETGAELVLADRDIQVTFA 129
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLM 317
R W + W K KL ++ + F S E + L++M DMLT + E++K+FP L
Sbjct: 130 RIWGNLGFWGKTKLFFTLVLSIF---SDEKITEEDLEKMKSGDMLTSALSELAKSFPQLK 186
Query: 318 ETLVHERDQYMSSTL 332
E+L+ ERD+Y++ +
Sbjct: 187 ESLIDERDKYLAQKI 201
>gi|256080155|ref|XP_002576348.1| hypothetical protein [Schistosoma mansoni]
gi|353232405|emb|CCD79760.1| hypothetical protein Smp_050430 [Schistosoma mansoni]
Length = 412
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 115/216 (53%), Gaps = 17/216 (7%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
ELP +V ++ C++ C VYL+GTAH S+ES +V+ + + + P +V LELC +R
Sbjct: 47 ELPETVSVIECENH-----CKVYLIGTAHFSEESIADVKKVTEQVHPDIVMLELCPNRSH 101
Query: 184 MLT--PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASH----LEIFPGSEFRVAFE 237
LT +N+K + KH + + L +++ + L + PG EFR A +
Sbjct: 102 TLTMDEENIKKQLKDISITSIIGKHGVSSGVLHYLLLRLSGYLVDTLGMAPGGEFRAAAK 161
Query: 238 EAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEM 296
EAMK V+LGDRPV ITL R E + W K+K + LF F P ++ ++EM
Sbjct: 162 EAMKQPHCHVVLGDRPVNITLYRALEALGPWTKLKFFIALLFS--FQPVTKE---QIEEM 216
Query: 297 DDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL 332
D L ++ M+ P L L+ ERDQY++ ++
Sbjct: 217 KKTDFLEKLLVSMAGEHPELTRILLDERDQYLARSI 252
>gi|301061907|ref|ZP_07202637.1| TraB family protein [delta proteobacterium NaphS2]
gi|300444011|gb|EFK08046.1| TraB family protein [delta proteobacterium NaphS2]
Length = 386
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 119/233 (51%), Gaps = 13/233 (5%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ LVGTAHVS+ES V +I+ P V +ELC SR +T N T +++ + K
Sbjct: 16 EIILVGTAHVSQESADLVTTVIEEEAPDTVAVELCQSRYQAMTDNNRWQET--DLIKVIK 73
Query: 204 KKHNTFGILYSWFLAK----VASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
+K F +L + LA + L I PG E A + A ++ L DR V+ TL R
Sbjct: 74 EK-KAFLLLSNLMLASFQKKIGKKLGIKPGEEMLRAVQAAKDTEAEIHLADRDVRTTLSR 132
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
TW M W K KLL+ + + E + + DV L ++ E+ K P L +
Sbjct: 133 TWRLMGFWTKFKLLFQLITSMGGVEEIEKEDIEKLKQQDV--LETLLSELGKTLPDLQQV 190
Query: 320 LVHERDQYMSSTLLKVATE-HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
L+ ERDQY++ K+ T +VAVVG GH+ GIK YW Q V + L TIP
Sbjct: 191 LIDERDQYLA---YKIRTAPGKKIVAVVGAGHVPGIKKYWDQEVDIAALETIP 240
>gi|195500664|ref|XP_002097469.1| GE24471 [Drosophila yakuba]
gi|194183570|gb|EDW97181.1| GE24471 [Drosophila yakuba]
Length = 532
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 120/227 (52%), Gaps = 21/227 (9%)
Query: 116 ETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFL 175
+T + + LP +V +L +T G VYLVGTAH S+ES +V +I ++P VV +
Sbjct: 229 DTIEEFEQNLPSTVTLL---NTPFGSK--VYLVGTAHFSEESQDDVSYVIRNVRPDVVMV 283
Query: 176 ELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEI 226
ELC SR+ +L +++ +P + ++ + F IL A++A L +
Sbjct: 284 ELCPSRIHILKLDEKTLLEEAKSINIPKIRGILHTHGYINGIFFILLLQMSAQIAKDLGM 343
Query: 227 FPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPS 285
PG EFR AFEE K G ++ LGDRP++ITL R + LW +KL++ F S
Sbjct: 344 APGGEFRRAFEEIHKLPGCILHLGDRPIRITLYRALRALSLWQTMKLVWRLTFTDSI--S 401
Query: 286 AEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL 332
E+ ++E D+L ++QEM+ FP + V ERD ++ +L
Sbjct: 402 IEE----VEECKQSDLLEKLMQEMAGEFPAFSDVFVRERDLFLCHSL 444
>gi|427794933|gb|JAA62918.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 482
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 127/237 (53%), Gaps = 22/237 (9%)
Query: 113 VPEETKKVLPE--ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKP 170
+P K+V E ELP +V +L T EG VYLVGTAH S ES +V I +P
Sbjct: 162 MPIAVKRVRKENPELPETVTVL---KTQEGSV--VYLVGTAHFSLESQEDVAKTIQETQP 216
Query: 171 QVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK----KHNTF--GILYSWFL---AKVA 221
VV +ELC SR+++L+ + + ++M K K N GI+Y L A +
Sbjct: 217 DVVLIELCKSRLNILSFDEEVILRESQSMNMEKMMTTIKQNGLVQGIMYILLLSMSAHLT 276
Query: 222 SHLEIFPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQA 280
L + PG EFR A +EA K G +I LGDRP+QITL+R + +W K++L + + A
Sbjct: 277 RQLGMAPGGEFRRAVQEAEKVRGCLIHLGDRPLQITLQRALAALSIWQKLRLAW-HMITA 335
Query: 281 FFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVAT 337
S E++ R K+ D+L ++ EM+ FP L + V ERD +++ +L A+
Sbjct: 336 KEPISKEEVERCKKQ----DLLEEMLAEMTGEFPALSKVFVKERDIFLAYSLRLAAS 388
>gi|154150919|ref|YP_001404537.1| TraB family protein [Methanoregula boonei 6A8]
gi|153999471|gb|ABS55894.1| TraB family protein [Methanoregula boonei 6A8]
Length = 401
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 141/268 (52%), Gaps = 23/268 (8%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
++ +VGTAHVS++S EV+A I+ +P +V +EL +R + L Q K PTV +++++
Sbjct: 2 AELRIVGTAHVSQKSVDEVKAAIEEFRPDIVAIELDPARFAALKKQA-KDPTVEDVLEV- 59
Query: 203 KKKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K N+ +L W L+ K+ + + PG+E + A EA V L DR +++TL
Sbjct: 60 -KNFNS--LLVQWLLSYLQRKIGVDVGVEPGAEMKAAITEAESRNIPVALVDRDIRLTLL 116
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R W+ M + KIK+ ++ +F + E ++ ++ + D D++ V++E + P
Sbjct: 117 RFWKSMGVIEKIKMFFALIFSIAEVDKGEQID--IESLKDQDIIDAVMEEFHRFSPNGAH 174
Query: 319 TLVHERDQYMSSTL--LKVATEHSSVVAVVGKGHLQGIKNYWKQPV---PVHDLMTIPSP 373
L+ ERD +++ L LK + ++A+VG GH QGI NY ++P P L+ P
Sbjct: 175 ALIDERDAFIAHQLVILKAQRPDARILAIVGAGHRQGITNYVEKPQTLPPFDSLIKEPKS 234
Query: 374 KP-------AVSALKVLSSLGVAVAGVA 394
P AV+ L +A +GV
Sbjct: 235 FPWAKIFGFAVTGLFAFLLAAIAFSGVG 262
>gi|383851467|ref|XP_003701254.1| PREDICTED: traB domain-containing protein-like [Megachile
rotundata]
Length = 454
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 166/331 (50%), Gaps = 36/331 (10%)
Query: 93 LGDEVRDESSDRDETNGA--VPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGT 150
+G +++ ++ D+ N + E + + E LP +V +LT T GG +YLVGT
Sbjct: 112 VGYQLKFDNHDQANKNSENDIQNQNEYDETIDERLPETVTLLT---TPNGGK--LYLVGT 166
Query: 151 AHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT------PQNLKVPTVGEMVDMWKK 204
AH S +S +V II ++P +V +ELC +R+ L +N ++ + DM K
Sbjct: 167 AHFSVQSQNDVAMIIRAVQPHIVAVELCKARIDFLNIAEEVLYRNATDLSLKSLTDML-K 225
Query: 205 KHNTFGILYSWFLAKVASH----LEIFPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRR 259
++ +G L+ + L ++ +H L + PG EFR AFEEA K +I L DR + IT++R
Sbjct: 226 EYGLYGFLH-FILHRMVTHVVKELGMPPGGEFRTAFEEAKKVPNCIIQLADRSISITVQR 284
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
+ W IKLL+ + + +D+ R ++ +M+T M + +P + T
Sbjct: 285 AVRALSWWEIIKLLWLVRHLDTHI-NEQDVERYKRKHVIEEMITT----MKEEYPAIERT 339
Query: 320 LVHERDQYMSSTLLKVAT--EHS------SVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
V ERD Y++ L+ AT +HS +V VVG GH+ GI W + V D+ I
Sbjct: 340 FVKERDVYLTYH-LQAATMVKHSPGLKPPRIVGVVGIGHVNGIVENWGK-VRSSDIWPIM 397
Query: 372 SPKPAVSALKVLS-SLGVAVAGVAIISGIYI 401
P + ++L + ++ GVA+ G I
Sbjct: 398 RVPPQSLSSRILKFTFKASLLGVAVYVGYKI 428
>gi|307352842|ref|YP_003893893.1| TraB family protein [Methanoplanus petrolearius DSM 11571]
gi|307156075|gb|ADN35455.1| TraB family protein [Methanoplanus petrolearius DSM 11571]
Length = 402
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 122/222 (54%), Gaps = 10/222 (4%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ LVGTAHVS+ S EV + I+ +P VV +EL +R + + Q K PTV E++
Sbjct: 3 EIRLVGTAHVSQASVDEVRSTIEEYQPDVVAIELDKARFAAIRNQGEK-PTVNEIL---- 57
Query: 204 KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K N +L W LA K+ + + PG+E A EEA K + L DR +++TL R
Sbjct: 58 KGGNFSELLVQWSLAYIQRKIGMDVGVEPGAEMLAAIEEAEKNNIPIALADRDIRLTLSR 117
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
W M + K+KLL++ + E+L+ + D++ I+E K P
Sbjct: 118 FWGGMGIIEKLKLLFAVVGAVAGGGDEEELDIEELTKNQ-DLIEASIEEFRKFSPKGAAA 176
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP 361
L+ ERD Y++ +LL++A+++ V+ +VG GH++GIK Y +P
Sbjct: 177 LIGERDAYLTHSLLRLASKNEKVLGIVGAGHVKGIKEYMAKP 218
>gi|169334438|ref|ZP_02861631.1| hypothetical protein ANASTE_00838 [Anaerofustis stercorihominis DSM
17244]
gi|169259155|gb|EDS73121.1| TraB family protein [Anaerofustis stercorihominis DSM 17244]
Length = 387
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 123/236 (52%), Gaps = 9/236 (3%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
D+ L+GTAHVS+ES +VE +I +KP V +EL R S L +N K ++V++ K
Sbjct: 14 DITLIGTAHVSRESAIQVENLIREIKPDNVCIELDEGRYSSL--ENNKSWQDTDIVNVIK 71
Query: 204 KKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+K T ++ S + ++A +I G E A + + + G K+ L DR ++ T R
Sbjct: 72 EKKTTLLLVNLILSSYQKRIAESFDINSGQEMINAIKVSKEIGCKLTLADRDIKTTFLRI 131
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
+ KM LW K+KLL + F E L+ + + D + + E+S+ FP L L
Sbjct: 132 FRKMSLWEKMKLLSGLILS--FFEDEELTEEDLENIKEGDFIENALLEISEDFPDLKTYL 189
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPA 376
V ERDQY+S + E +VAVVG H+ GI ++ + + ++ TIP A
Sbjct: 190 VDERDQYLSQKIKNAEGER--IVAVVGAAHMNGIIKNIEKDIDLSEIDTIPKGGKA 243
>gi|333999895|ref|YP_004532507.1| TraB family protein [Treponema primitia ZAS-2]
gi|333740276|gb|AEF85766.1| TraB family protein [Treponema primitia ZAS-2]
Length = 392
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 122/238 (51%), Gaps = 13/238 (5%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN-LKVPTVGEMVDMW 202
++ L+GTAHVSK+S EV +I KP V +EL S R + +T ++ + V ++
Sbjct: 14 EIILIGTAHVSKDSIDEVAGVIREEKPDQVCVELDSGRYTAMTEKDSWEKLNVAKVFREG 73
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K ++ S F ++ L + PG E + A + A + G I DR VQ+TLRR W
Sbjct: 74 KGFLLMANLVLSGFQRRMGQELGVKPGDEMKAAIDTAEELGIPYIFCDREVQLTLRRAWA 133
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMSKAFPTLMETLV 321
W K KLL S + AF + LK ++D + + E++ P + ETL+
Sbjct: 134 HCGFWSKSKLLASLVSSAFTTEKMSEAEIEGLKNRSELDGM---MAELADYLPGVKETLI 190
Query: 322 HERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK------QPVPVHDLMTIPSP 373
ERDQY+++ + A + VAVVG GHL GIK + + + V +L +IP+P
Sbjct: 191 DERDQYLAAKIW--AGGSAKQVAVVGAGHLMGIKAHLERIAAGGESADVAELDSIPAP 246
>gi|119953205|ref|YP_945414.1| pheromone shutdown protein [Borrelia turicatae 91E135]
gi|119861976|gb|AAX17744.1| pheromone shutdown protein [Borrelia turicatae 91E135]
Length = 402
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 144/259 (55%), Gaps = 25/259 (9%)
Query: 136 STAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML--TPQNLKVP 193
ST + +Y++GTAHVSK+S ++ +I+ LKP + +EL +R + T +N K
Sbjct: 16 STLDTDHDKIYVLGTAHVSKKSSQDTATLIETLKPDFIAVELDEARYHAILKTDENEKWR 75
Query: 194 TVGEMVDMWK--KKHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVI 247
+ D++K K+ F I+ S F K+A I PG E + A +A ++ +I
Sbjct: 76 NL----DIYKVIKQGKAFLLIVQIILSNFQKKLAKEQGINPGEEMKTAILKAKEHNIPLI 131
Query: 248 LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQ 307
L DR V+ TL+R W +P + K+K++ S LF + +D LKE D+L+ +++
Sbjct: 132 LADRKVETTLKRAWNCVPTFEKVKIISS-LFSFSDVKVTQDEIEKLKEQ---DVLSNMME 187
Query: 308 EMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ------P 361
E++K PT+ + L+ ERD++++S +L+ + +++AVVG GH++GI K+
Sbjct: 188 ELAKEIPTVKKVLIDERDEFIASKILEGS---GTILAVVGAGHVKGIIANLKEIKENKKI 244
Query: 362 VPVHDLMTIPSPKPAVSAL 380
V + +L TIP +VS L
Sbjct: 245 VNIDNLNTIPKNTFSVSKL 263
>gi|289209505|ref|YP_003461571.1| TraB family protein [Thioalkalivibrio sp. K90mix]
gi|288945136|gb|ADC72835.1| TraB family protein [Thioalkalivibrio sp. K90mix]
Length = 404
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 135/268 (50%), Gaps = 9/268 (3%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMV 199
G +V ++GTAHVS+ S +V A++D + V +ELC SR +ML P + + ++
Sbjct: 20 GDTEVVVLGTAHVSRASADKVRALVDTGEFDAVAIELCESRQRAMLDPDAVGRMDLFSVM 79
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
+ + + ++A I PG+E R A + A+ G + L DR + +TLRR
Sbjct: 80 RQGQAPMIAASLALGAYQQRLAEQYGIEPGAEMRAAMDVALDRGLPLALIDRDLGLTLRR 139
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLME 318
T+ +P W ++ L+ LF + S E ++ ++ + + DML E ++ L
Sbjct: 140 TYRAVPWWQRMGLIGG-LFGSVL--SREKIDESEIERLKEGDMLESTFSEFAEQSEDLYR 196
Query: 319 TLVHERDQYMSSTLLKVA--TEHSSVVAVVGKGHLQGIKNYWKQPV--PVHDLMTIPSPK 374
TL+HERDQYM++ L ++A H ++AVVG GHL GI + + P L ++ P
Sbjct: 197 TLIHERDQYMAAHLRRLAESGNHRRILAVVGAGHLSGIATQVEDELTPPDAILDSLDQPP 256
Query: 375 PAVSALKVLSSLGVAVAGVAIISGIYIN 402
P K+L + VAV + G N
Sbjct: 257 PKARWPKILPWVIVAVILTGFVIGFLRN 284
>gi|194743156|ref|XP_001954066.1| GF18088 [Drosophila ananassae]
gi|190627103|gb|EDV42627.1| GF18088 [Drosophila ananassae]
Length = 541
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 119/227 (52%), Gaps = 21/227 (9%)
Query: 116 ETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFL 175
+T + + LP +V +L ++ VYLVGTAH S+ES +V +I ++P VV +
Sbjct: 238 DTIEEFEQNLPSTVTLLNTPFGSK-----VYLVGTAHFSEESQDDVSYVIRNVRPDVVMV 292
Query: 176 ELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEI 226
ELC SR+ +L +++ +P + ++ + F IL A++A L +
Sbjct: 293 ELCPSRIHILKLDEKTLLEEAKSINIPKIRGILQTHGYINGIFFILLLQMSAQIAKDLGM 352
Query: 227 FPGSEFRVAFEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPS 285
PG EFR AFEE K G ++ LGDRP++ITL R + +W +KL++ F S
Sbjct: 353 APGGEFRRAFEEIHKLPGCILHLGDRPIRITLYRALRALSVWQTMKLVWRLTFTDSI--S 410
Query: 286 AEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL 332
E+ ++E D+L ++QEM+ FP + V ERD ++ +L
Sbjct: 411 IEE----VEECKQSDLLEKLMQEMAGEFPAFSDVFVRERDLFLCHSL 453
>gi|85858974|ref|YP_461175.1| mating response propein to a peptide sex pheromone [Syntrophus
aciditrophicus SB]
gi|85722065|gb|ABC77008.1| mating response propein to a peptide sex pheromone [Syntrophus
aciditrophicus SB]
Length = 398
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 122/237 (51%), Gaps = 9/237 (3%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN-LKVPTVGEMV 199
G ++ LVGTAHVS+ES VE +I+ P V +ELC +R L ++ + + +++
Sbjct: 23 GGKEIILVGTAHVSRESADLVERVIEEENPDTVCVELCQARFDALEKKDQWQEMDIMKVI 82
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
+ +L F K+A I PG E A A K G +++L DR ++ TL R
Sbjct: 83 RDKRTSLLLSQLLMLSFQKKIAEKFHINPGEEMLRAIALAEKKGKRIVLADREIRTTLLR 142
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLME 318
TW KM ++K KL+ + F + + LKE D +DM ++++ P L
Sbjct: 143 TWRKMRFFNKAKLMTEMILSLFMTEEITEEDIEKLKEHDVLDM---TLRQLGTKMPDLKS 199
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP--VPVHDLMTIPSP 373
TL+ ERDQY++ ++ + VVAVVG GH+ GI N +Q V + ++ IP P
Sbjct: 200 TLIDERDQYLAHSIRH--ADGDKVVAVVGAGHIPGIVNAIEQKKNVNIEEISIIPPP 254
>gi|456825658|gb|EMF74036.1| TraB family protein [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 277
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 123/236 (52%), Gaps = 12/236 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G +V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 30 GKTNVTILGTAHISQKSIDEVQRIIRKEKPDTVCVELCNSRIRSLKDSEHWKKLDIFKVF 89
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A E K G K++ DR V T
Sbjct: 90 KERKMYLLLSSLILSAFQKKLGKGS----IRPGDEMRMAIYEGEKIGAKIVPIDREVSTT 145
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + +++++ LL + L F ED++ ++EM D+L + ++ K + +
Sbjct: 146 LKRAWWNIGIFNRLFLLSALLTSLFV---KEDISEEKIEEMKSEDVLKDLFSQLPKRYES 202
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
+ ++ ERD Y++ + A E V AVVG GHLQGI N+ ++ + L +P
Sbjct: 203 IKNVIIDERDSYLAQKIRDSAKEGKKVFAVVGAGHLQGILNHVQEERDISKLDELP 258
>gi|356535904|ref|XP_003536482.1| PREDICTED: traB domain-containing protein-like [Glycine max]
Length = 371
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 125/231 (54%), Gaps = 22/231 (9%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP-------QNLK------ 191
++L+GT HVS+ S EVE ++ L+P V +ELC SR ++ + L+
Sbjct: 83 IWLIGTTHVSEVSAVEVERVVRALRPDNVVVELCRSRAGIMYATANDELGKQLRSNMFSL 142
Query: 192 -----VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKV 246
VG +++ + +L + F +K++S + G EFR A + + + G ++
Sbjct: 143 SGTGFFGAVGRSINLGGQTALALRLLLATFSSKISSDINRPFGDEFRAARKASEEIGAQI 202
Query: 247 ILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLV 305
+LGDRP++ITL+R W+ M K+ L+ S + + S +N++ L+E D +
Sbjct: 203 VLGDRPIEITLQRAWKAMKWTQKLSLVLS-IIRGIASSSNSSINKLKLQEASSDDGTFQL 261
Query: 306 IQEMSKAFPTLMETLVHERDQYMSSTLL--KVATEHSSVVAVVGKGHLQGI 354
+++S ++P+L+ L+HERD Y++ +L K +VV V+GKGH+ G+
Sbjct: 262 YEQLSFSYPSLLPPLIHERDTYLAWSLKRSKAVNNSKNVVGVIGKGHMNGV 312
>gi|386853822|ref|YP_006203107.1| Pheromone shutdown protein [Borrelia garinii BgVir]
gi|365193856|gb|AEW68754.1| TraB [Borrelia garinii BgVir]
Length = 404
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 140/266 (52%), Gaps = 19/266 (7%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML--TPQNLKVPTVGEMVDMW 202
+Y++GTAHVSK+S + +I+ LKP + +EL +R + T +N K + +D
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTDENEKWRNLD--IDKA 84
Query: 203 KKKHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K+ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+
Sbjct: 85 LKQGKAFFLIINIILSNFQKKLAKEQGIQPGEEMKTAISKAKKHNIPLILADRKIETTLK 144
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R W +P++ KIK++ S F L + ++++ + D L+ V++E+SK P + +
Sbjct: 145 RAWISIPIFEKIKIISSL----FSLTDTKITKDEIEKLKEQDALSKVMEELSKEIPKVKK 200
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS----PK 374
L+ ERD+++++ +L+ ++AVVG GH+ GI + K+ ++ + PK
Sbjct: 201 VLIDERDEFITNKILEGT---GIILAVVGAGHVNGIMSTLKEISQNKKIINVEELDRIPK 257
Query: 375 PAVSALKVLSSLGVAVAGVAIISGIY 400
S KVLS L + I+S Y
Sbjct: 258 KHFSFGKVLSYLIAISIILLIVSSFY 283
>gi|225552468|ref|ZP_03773408.1| pheromone shutdown protein [Borrelia sp. SV1]
gi|225371466|gb|EEH00896.1| pheromone shutdown protein [Borrelia sp. SV1]
Length = 404
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 136/264 (51%), Gaps = 15/264 (5%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+Y++GTAHVSK+S + +I+ LKP + +EL +R + N +D K
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTNENEKWRNLDIDKALK 86
Query: 205 KHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+R
Sbjct: 87 QGKAFFLIINIILSNFQKKLAKEQGIKPGEEMKTAILKAKKHNIPLILADRKIETTLKRA 146
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W +P++ K+K++ S F L A+ ++++ + D L+ +++E+SK P + + L
Sbjct: 147 WISIPIFEKVKIISSL----FSLTDAKITKDEIEKLKEQDALSKIMEELSKEIPKVKKVL 202
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS----PKPA 376
+ ERD+++++ +L+ ++AVVG GH+ GI K+ ++ + PK
Sbjct: 203 IDERDEFITNKILEGT---GIILAVVGAGHVSGIMRTLKEISQNKKIINVEELEKIPKKH 259
Query: 377 VSALKVLSSLGVAVAGVAIISGIY 400
S KVLS L + I+S Y
Sbjct: 260 FSFSKVLSCLIAISIILLIVSSFY 283
>gi|374994729|ref|YP_004970228.1| pheromone shutdown-related protein TraB [Desulfosporosinus orientis
DSM 765]
gi|357213095|gb|AET67713.1| pheromone shutdown-related protein TraB [Desulfosporosinus orientis
DSM 765]
Length = 388
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 120/234 (51%), Gaps = 6/234 (2%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWK 203
+ L+GTAHVSK+S EV+ +I+ KP V +ELC SR + + K + +++ +
Sbjct: 16 IILIGTAHVSKKSAEEVKELIEEEKPDTVCVELCQSRYQAIQDAERWKNTDIVKIIKQGQ 75
Query: 204 KKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
++ S + ++A +I PG E E A + G + L DR +Q T+RR W
Sbjct: 76 SLVLLINLIMSAYQKRLAKQFDIKPGQEMIQGIESAKQLGATLCLADRDIQTTMRRLWRG 135
Query: 264 MPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHE 323
+ W K KL Y + + E L++M DMLT V+ EM+ +FP+L +V E
Sbjct: 136 LGFWGKAKLFYQLIVS--LVADEEISEEELEKMKSEDMLTTVLNEMADSFPSLKSVIVDE 193
Query: 324 RDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTI-PSPKPA 376
RD+Y++ + T VVAV+G H+ GIK + + +L + P+ K A
Sbjct: 194 RDKYLAQKIKD--TTGDKVVAVLGAAHIPGIKRELENDNNLEELAKVQPASKTA 245
>gi|15679194|ref|NP_276311.1| pheromone shutdown protein TraB [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622291|gb|AAB85672.1| pheromone shutdown protein TraB [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 234
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 23/240 (9%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKV----PTVGEMV 199
++ ++GTAHVS ES EV I ++P VV +EL R L + L V P++ E +
Sbjct: 5 ELRIIGTAHVSSESIDEVRRTILEMEPDVVAVELDPERYRRLMDEKLGVQRDEPSLREAL 64
Query: 200 DMWKKKHNTFG-ILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQ 254
+H G IL WFL KV L + PGSE A E A + G + L DR +
Sbjct: 65 -----RHGNIGVILAGWFLTYFQRKVGEDLGVQPGSEMLAAIEAAHEVGAGLALIDRDIG 119
Query: 255 ITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFP 314
+T++R+ + M K++ ++ + ++F +D + ++++ D L V++E K P
Sbjct: 120 LTMQRSIKSMGRMEKLR-FFAGIIRSFLW---KDDPKDIEDLKSDDTLLEVMEEFRKISP 175
Query: 315 TLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPV---PVHDLMTIP 371
LV ERD +M+ LL + E VVAVVG GH +GI+ Y + P P+ +LM IP
Sbjct: 176 AAYRVLVEERDAFMAHRLLSI--EEDRVVAVVGAGHRRGIEEYLQNPQELPPLDELMKIP 233
>gi|407715812|ref|YP_006837092.1| TraB family protein [Cycloclasticus sp. P1]
gi|407256148|gb|AFT66589.1| TraB family protein [Cycloclasticus sp. P1]
Length = 396
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 130/240 (54%), Gaps = 15/240 (6%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDM 201
C+V L+GTAHVSK S V +++ + V +ELC SR +++ P NL + ++
Sbjct: 17 CEVTLLGTAHVSKASADAVHSLLSSDHYEAVAIELCPSRYNALIDPDNLAQMDLFNVIKS 76
Query: 202 WKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTW 261
K + F K+A + I PG+E ++A E A + V+L DR V ITL+R +
Sbjct: 77 GKAAMVAASLALGAFQQKMADEMGIEPGAEMKMAAELAQQSHKPVLLIDRDVGITLKRVY 136
Query: 262 EKMPLWHKIKLLYSFLFQAFFLP---SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
+P W +++ L+S LF + S ED+ + LKE D+L + +++ +
Sbjct: 137 RNVPWWKRME-LFSGLFASLMFSEKVSEEDIEK-LKEG---DVLEATFSQFAESSNEIYM 191
Query: 319 TLVHERDQYMSSTLLKVA--TEHSSVVAVVGKGHLQGIKNYWKQPV----PVHDLMTIPS 372
LV+ERDQYM+ L A ++ +++AV+G GHL+GIK Y + + + +L +IP+
Sbjct: 192 PLVNERDQYMAHRLFNDAHSGQYKTILAVIGAGHLKGIKGYLESQLQNTKSIEELESIPA 251
>gi|47086787|ref|NP_997788.1| traB domain-containing protein [Danio rerio]
gi|33416437|gb|AAH55655.1| TraB domain containing [Danio rerio]
Length = 360
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 140/270 (51%), Gaps = 30/270 (11%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
+LP +V LT T EG VYLVGTAH S S ++V I ++P VV +ELC RVS
Sbjct: 49 DLPETVTRLT---TPEGSV--VYLVGTAHFSDSSKKDVATTIRAVQPDVVVVELCQYRVS 103
Query: 184 MLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRV 234
ML + + +++ K K++ L L KV++H L + PG EFR
Sbjct: 104 MLKMDEKTLLKEAKDINLEKVQQAIKQNGVMSGLMQILLLKVSAHITEQLGMAPGGEFRE 163
Query: 235 AFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRML 293
AF+EA K K LGDRP+ +T +R + LW K +L + F + + S ED+ +
Sbjct: 164 AFKEAGKVPFCKFHLGDRPIPVTFKRAIAALSLWQKARLAWGLCFLSDPI-SKEDVEKCK 222
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA----------TEHSSVV 343
++ D+L + EM FP L T+V ERD Y++ TL + A + VV
Sbjct: 223 QK----DLLEQTMSEMIGEFPALHRTIVAERDIYLTHTLRQAARCVEAPPTAEKVPAVVV 278
Query: 344 AVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
VVG GH+ GI+ W + + +H++M++ P
Sbjct: 279 GVVGMGHVSGIERNWDKELNIHEIMSVAPP 308
>gi|410965876|ref|XP_003989465.1| PREDICTED: traB domain-containing protein [Felis catus]
Length = 377
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 152/302 (50%), Gaps = 40/302 (13%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LPR+V L AE G+ VY+VGTAH S +S R+V I ++P VV +ELC RVSM
Sbjct: 60 LPRTVTELV----AEDGS-RVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSM 114
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + + + K +++ L L KV++H L + PG EFR A
Sbjct: 115 LKMDESTLLQEAKEISLEKLQQAVRQNGVMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 174
Query: 236 FEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F+EA K K LGDRP+ +T +R + W K+KL + F + + S +D+ R +
Sbjct: 175 FKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVERCKQ 233
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE---------------H 339
+ D+L ++ EM AFP L T+V ERD Y++ L + A
Sbjct: 234 K----DLLEQMMAEMVGAFPDLHRTIVSERDVYLTYMLRQAARRLELPRSSDAEPRKCVP 289
Query: 340 SSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIIS-G 398
S VV VVG GH+ GI+ W + + ++MT+P P S +S L V A + ++ G
Sbjct: 290 SVVVGVVGMGHVPGIEKNWTTDLNIQEIMTVPPP----SISGRVSRLAVKAAFLGLLGYG 345
Query: 399 IY 400
+Y
Sbjct: 346 LY 347
>gi|344309845|ref|XP_003423585.1| PREDICTED: traB domain-containing protein-like [Loxodonta africana]
Length = 377
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 158/321 (49%), Gaps = 40/321 (12%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + V + ++ P+ LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 38 SDMDAFNLLLEVKLKRRRERPD-LPRTVTELV----AEDGS-RVYVVGTAHFSDDSKRDV 91
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWF 216
I ++P VV +ELC RVSML + + V + K +++ L
Sbjct: 92 AKTIRAVQPDVVVVELCQYRVSMLKMDERTLLREAKEVSLEKLQQAVRQNGVMSGLMQML 151
Query: 217 LAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIK 271
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W K+K
Sbjct: 152 LLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVK 211
Query: 272 LLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSST 331
L + F + + S +D+ + ++ D+L ++ EM FP L T+V ERD Y++
Sbjct: 212 LAWGLCFLSDPI-SKDDVEKCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYM 266
Query: 332 LLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPA 376
L + A S VV VVG GH+ GI+ W + + ++MT+P P
Sbjct: 267 LRQAARRLELPRTSDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTELNIQEIMTVPPP--- 323
Query: 377 VSALKVLSSLGVAVAGVAIIS 397
S LS L V A ++
Sbjct: 324 -SISGRLSRLAVKAAFFGLVG 343
>gi|288555033|ref|YP_003426968.1| TraB family pheromone shut-down protein [Bacillus pseudofirmus OF4]
gi|288546193|gb|ADC50076.1| TraB family pheromone shut-down protein [Bacillus pseudofirmus OF4]
Length = 390
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 119/225 (52%), Gaps = 8/225 (3%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN-LKVPTVGEMVDMW 202
++ L+GTAHVSK+S EV+ +I+ +P V +EL R +T N K + +++
Sbjct: 15 ELILIGTAHVSKQSAEEVKQVIEAEQPDSVCVELDEQRYQSITAGNKWKDMDIFKVIKEK 74
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K + S F ++A +I PG E E A + G +++L DR +QIT R W
Sbjct: 75 KATLLLMNLFISSFQKRMAKQFDIKPGQEMIQGIESAKETGAELVLADRNIQITFSRIWH 134
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
+ LW + KLL S ++ F + E L+ + DML ++ +++ +FP L + L+
Sbjct: 135 GVGLWGRAKLLMSIVYSVF--NNEEISEEELERLKTEDMLNTMLHDLTVSFPRLKKPLID 192
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDL 367
ERDQY++ + + + VVAV+G H+ GIK KQ HDL
Sbjct: 193 ERDQYLAQKIKEAPGD--KVVAVLGAAHVPGIKEQIKQD---HDL 232
>gi|187918281|ref|YP_001883844.1| pheromone shutdown protein [Borrelia hermsii DAH]
gi|119861129|gb|AAX16924.1| pheromone shutdown protein [Borrelia hermsii DAH]
Length = 402
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 145/259 (55%), Gaps = 25/259 (9%)
Query: 136 STAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML--TPQNLKVP 193
ST + +Y++GTAHVSK+S ++ +I+ LKP + +EL +R + T +N K
Sbjct: 16 STLDVDHYKIYILGTAHVSKKSSQDTATLIETLKPNFIAVELDEARYHAILKTDENEKWR 75
Query: 194 TVGEMVDMWK--KKHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVI 247
+ D++K K+ F I+ S F K+A I PG E + A +A ++ +I
Sbjct: 76 NL----DIYKVIKQGKAFLLIVQIILSNFQKKLAKEQGINPGEEMKTAILKAKEHNIPLI 131
Query: 248 LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQ 307
L DR V+ TL+R W +P++ K+K++ S LF + +D LKE D+L+ ++
Sbjct: 132 LVDRKVETTLKRAWNCVPIFEKVKIISS-LFSFSDVKVTQDEIEKLKEQ---DVLSNMMG 187
Query: 308 EMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ------P 361
E++K PT+ + L+ ERD++++S +L+ + +++AVVG GH++GI K+
Sbjct: 188 ELAKEIPTVKKVLIDERDEFIASKILEGS---GTILAVVGAGHVKGIIANLKEIKENKKI 244
Query: 362 VPVHDLMTIPSPKPAVSAL 380
+ +++L TIP ++S L
Sbjct: 245 ININELNTIPKNTFSISKL 263
>gi|77735851|ref|NP_001029624.1| traB domain-containing protein [Bos taurus]
gi|75057695|sp|Q58DF3.1|TRABD_BOVIN RecName: Full=TraB domain-containing protein
gi|61553998|gb|AAX46491.1| hypothetical protein PP2447 [Bos taurus]
gi|296486857|tpg|DAA28970.1| TPA: traB domain-containing protein [Bos taurus]
Length = 377
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 164/330 (49%), Gaps = 41/330 (12%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LP +V L AE G+ VY+VGTAH S +S R+V
Sbjct: 38 SDVDAFNLLLEMKLKRRRERPN-LPHTVTELV----AEDGS-RVYVVGTAHFSDDSKRDV 91
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWF 216
I ++P VV +ELC RVSML + + + + K +++ L
Sbjct: 92 VKTIREVQPDVVVVELCQYRVSMLKMDERTLLREAKEISLEKLQQAIRQNGVASGLMQML 151
Query: 217 LAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIK 271
L KV++H L + PG EFR AF+EA + K LGDRP+ +T +R + LW K+K
Sbjct: 152 LLKVSAHITEQLGVAPGGEFREAFKEASRVPFCKFHLGDRPIPVTFKRAIAALSLWQKVK 211
Query: 272 LLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSST 331
L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y++
Sbjct: 212 LAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMVGEFPDLHRTIVSERDVYLTYM 266
Query: 332 LLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPA 376
L + A S VV VVG GH+ GI+ W + + ++MT+P P
Sbjct: 267 LRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWTTDLNIQEIMTVPPP--- 323
Query: 377 VSALKVLSSLGVAVAGVAIIS-GIYINCKK 405
SA +S L V A + ++ G+Y ++
Sbjct: 324 -SASGRVSRLAVKAAALGLLGYGLYWTGRR 352
>gi|288561206|ref|YP_003424692.1| TraB family protein [Methanobrevibacter ruminantium M1]
gi|288543916|gb|ADC47800.1| TraB family protein [Methanobrevibacter ruminantium M1]
Length = 388
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 139/269 (51%), Gaps = 22/269 (8%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPTVGEMVDMWKK- 204
++GTAHVS+ S EV+ I KP+VV +EL R + ++ +N V + + + K
Sbjct: 8 IIGTAHVSQNSVEEVKEAILEDKPEVVAIELDRGRYIRLMNERNGIVED--DQIHITKII 65
Query: 205 KHNTFGI-----LYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K N G+ + S+ K+ L+I PGSE A + A + G ++ L DR + ITL+R
Sbjct: 66 KENKVGVFLVTTILSYMQNKIGDDLDIKPGSEMIGAIDAAEETGSRIALIDRDINITLQR 125
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMSKAFPTLME 318
M W K+K +Y + E+L+ LKE +D +E+S P E
Sbjct: 126 VLNHMSTWEKLKFIYG-IIGGLLSSDDEELDVEALKEQSAIDEAMGYFKEIS---PGAYE 181
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP--VPVHDLMTIPSPKPA 376
LV+ERD Y+++++L + +H V+AVVG GH +GI Y P +P H + K
Sbjct: 182 ALVNERDAYLANSILHIPEDH--VIAVVGAGHKEGINRYLDNPETIPPHSELIDMDKKGG 239
Query: 377 VSALKVLSSL----GVAVAGVAIISGIYI 401
+ LK++ +L V + +A ++GI+I
Sbjct: 240 IPWLKIILALIPISFVVIFFLAWMNGIHI 268
>gi|224368348|ref|YP_002602511.1| protein TraB [Desulfobacterium autotrophicum HRM2]
gi|223691064|gb|ACN14347.1| TraB [Desulfobacterium autotrophicum HRM2]
Length = 394
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 129/254 (50%), Gaps = 15/254 (5%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+GTAHVSKES V +I+ +P V +ELC +R+ + ++ +++ + +
Sbjct: 21 EIILIGTAHVSKESALLVTRVIESERPDTVCVELCETRLQSIRDKDAWRNM--DIIKVIR 78
Query: 204 KKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+K F ++ + F ++A EI PG E A E K ++ DR +Q TL R
Sbjct: 79 EKKAMFLLMNLMLASFQKRIAEKFEIKPGQEMINAIEAGEKIDARIFPADRAIQTTLTRV 138
Query: 261 WEKMPLWHKIKLLYSFLFQ--AFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
W M LW ++KL++ +F + E++ RM +E D+L ++ +M ++ P L
Sbjct: 139 WRSMGLWERLKLMFQMVFSLGNTDEITEEEIERMKQE----DILQTLLADMKRSHPILER 194
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ--PVPVHDLMTIPSPKPA 376
L+ ERDQ+++ T+ + +VAV G GH+ GIK Y V + +L IP
Sbjct: 195 ILIDERDQFLAETIRTAPGDR--IVAVAGAGHVPGIKRYLADSTAVDMDELTRIPRGGNF 252
Query: 377 VSALKVLSSLGVAV 390
+K L L + V
Sbjct: 253 GKIMKWLIPLAILV 266
>gi|297569185|ref|YP_003690529.1| TraB family protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925100|gb|ADH85910.1| TraB family protein [Desulfurivibrio alkaliphilus AHT2]
Length = 399
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 134/275 (48%), Gaps = 22/275 (8%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWK 203
++L+GTAHVS+ES V +ID L+P V LEL R S+ + ++ + E++ +
Sbjct: 27 IFLIGTAHVSQESADLVHQVIDELRPDAVCLELDEKRYQSLAHRKKWELLDLKEIMRRRQ 86
Query: 204 KKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
+L + + K+ L + PGSE A +A + V L DR V+IT+RR W
Sbjct: 87 LATLLINLLLASYQKKLGDKLGVQPGSELLNAARQAEELNIPVALCDRDVRITMRRAWRA 146
Query: 264 MPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHE 323
P + K+ LL + L F + + L+E+ + D+L+ ++ ++ + P L E L+ E
Sbjct: 147 TPWYRKMMLLATLLAGMFDRSEISEAD--LRELRNTDLLSELMAQLGRELPELKEVLIDE 204
Query: 324 RDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVL 383
RD Y++ + AT +VAVVG GH+ G+K Q + TI PA K L
Sbjct: 205 RDTYLAEKI--KATSGDKLVAVVGAGHVAGLKKALAQDRQ-EQMATISRIPPAAKTWKAL 261
Query: 384 S----------------SLGVAVAGVAIISGIYIN 402
+ S G+AVAG +I I N
Sbjct: 262 AWAVPAIILSALAYIAISKGMAVAGQNLIYWILAN 296
>gi|408421338|ref|YP_006762752.1| TraB family protein [Desulfobacula toluolica Tol2]
gi|405108551|emb|CCK82048.1| TraB family protein [Desulfobacula toluolica Tol2]
Length = 393
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 135/268 (50%), Gaps = 16/268 (5%)
Query: 122 PEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR 181
P++ + + ++C+ ++ L+GTAHVSK+S + V+ I P V +ELC +R
Sbjct: 4 PDKDDKMITRISCNGK------EIILIGTAHVSKQSAQLVQDTIHEQNPDTVCVELCRTR 57
Query: 182 VSMLTPQN-LKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAM 240
++ L + K + +++ K +L + F K+A I PG E A A
Sbjct: 58 LAALKDADRWKNMDIVKVIKEKKALLLFMNLLLASFQKKMADKFNIKPGQEMINAIAAAE 117
Query: 241 KYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYS--FLFQAFFLPSAEDLNRMLKEMDD 298
K ++ DR +Q+TL R W M +W K+KL+ S F F A ED+ +M +E
Sbjct: 118 KINALIVPADRDIQVTLSRVWRGMGVWEKLKLMASLVFSFGASDDIEEEDIEKMKQE--- 174
Query: 299 VDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYW 358
D+L ++ ++ K P + +TL++ERD++++ + E +VAVVG H GIK Y
Sbjct: 175 -DILQTLLADVKKTHPIIEKTLINERDRFLTEKIRSAPGEK--IVAVVGAAHAPGIKKYL 231
Query: 359 KQPVPVHDLMTIPSPKPAVSALKVLSSL 386
V DL + S PA + K+L L
Sbjct: 232 ALN-DVIDLDELNSVPPAGNTGKILKWL 258
>gi|357444077|ref|XP_003592316.1| TraB domain-containing protein [Medicago truncatula]
gi|355481364|gb|AES62567.1| TraB domain-containing protein [Medicago truncatula]
Length = 380
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 125/229 (54%), Gaps = 21/229 (9%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVP----------- 193
++L+GT HVSKES +VE ++ +KP V +ELC SR ++ + ++
Sbjct: 93 IWLIGTTHVSKESAMDVERVVKAVKPDNVVVELCRSRAGIMYADDDQLDKQLRSTMFSLS 152
Query: 194 ------TVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVI 247
+G +++ + +L + F +K++S+++ G EFR A + + + G +++
Sbjct: 153 GTGFFGAIGRSINLGGQTALALRLLLAAFSSKISSNIDRPFGDEFRAARKVSEEVGAQLV 212
Query: 248 LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQ 307
LGDRP++ITL+R W+ + K+ LL + + + S +++ K + L L +
Sbjct: 213 LGDRPIEITLQRAWKALNWTQKLSLL-TIVVRGITSSSDISTDKLEKASSNDGTLQLY-E 270
Query: 308 EMSKAFPTLMETLVHERDQYMSSTLL--KVATEHSSVVAVVGKGHLQGI 354
++S ++P+L+ L+HERD Y++ +L K VV V+GKGH+ G+
Sbjct: 271 QLSFSYPSLLPPLIHERDTYLAWSLKRSKAVNNCKRVVGVIGKGHMNGV 319
>gi|51598673|ref|YP_072861.1| pheromone shutdown protein [Borrelia garinii PBi]
gi|51573244|gb|AAU07269.1| pheromone shutdown protein [Borrelia garinii PBi]
Length = 404
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 140/266 (52%), Gaps = 19/266 (7%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML--TPQNLKVPTVGEMVDMW 202
+Y++GTAHVSK+S + +I+ LKP + +EL +R + T +N K + +D
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTDENEKWRNLD--IDKA 84
Query: 203 KKKHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K+ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+
Sbjct: 85 LKQGKAFFLIINIILSNFQKKLAKEQGIQPGEEMKTAILKAKKHNIPLILADRKIETTLK 144
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R W +P++ KIK++ S F L + ++++ + D L+ V++E+SK P + +
Sbjct: 145 RAWISIPIFEKIKIISSL----FSLTDTKLTKDEIEKLKEQDALSKVMEELSKEIPKVKK 200
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS----PK 374
L+ ERD+++++ +L+ V+AVVG GH+ GI + K+ ++ + PK
Sbjct: 201 VLIDERDEFITNKILEGT---GIVLAVVGAGHVNGIMSTLKEISQNKKIINVEELDKIPK 257
Query: 375 PAVSALKVLSSLGVAVAGVAIISGIY 400
S KVLS L + I+S Y
Sbjct: 258 KHFSFGKVLSYLIAISIILLIVSSFY 283
>gi|408671036|ref|YP_006871107.1| pheromone shutdown protein [Borrelia garinii NMJW1]
gi|407240858|gb|AFT83741.1| pheromone shutdown protein [Borrelia garinii NMJW1]
Length = 404
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 140/266 (52%), Gaps = 19/266 (7%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML--TPQNLKVPTVGEMVDMW 202
+Y++GTAHVSK+S + +I+ LKP + +EL +R + T +N K + +D
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTDENEKWRNLD--IDKA 84
Query: 203 KKKHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K+ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+
Sbjct: 85 LKQGKAFFLIINIILSNFQKKLAKEQGIQPGEEMKTAILKAKKHNIPLILADRKIETTLK 144
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R W +P++ KIK++ S F L + ++++ + D L+ +++E+SK P + +
Sbjct: 145 RAWISIPIFEKIKIISSL----FSLTDTKITKDEIEKLKEQDALSKIMEELSKEIPKVKK 200
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS----PK 374
L+ ERD+++++ +L+ V+AVVG GH+ GI + K+ ++ + PK
Sbjct: 201 VLIDERDEFITNKILEGT---GIVLAVVGAGHVNGIMSTLKEISQNKKIINVEELDRMPK 257
Query: 375 PAVSALKVLSSLGVAVAGVAIISGIY 400
S KVLS L + I+S Y
Sbjct: 258 KHFSFGKVLSYLIAISIILLIVSSFY 283
>gi|374579875|ref|ZP_09652969.1| pheromone shutdown-related protein TraB [Desulfosporosinus youngiae
DSM 17734]
gi|374415957|gb|EHQ88392.1| pheromone shutdown-related protein TraB [Desulfosporosinus youngiae
DSM 17734]
Length = 391
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 119/242 (49%), Gaps = 14/242 (5%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKH 206
L+GTAHVSK+S V+ +I+ KP V +EL R + N T ++ + K+K
Sbjct: 20 LIGTAHVSKQSADLVKEVIEAEKPDSVCIELDEPRYKTIIEGNKWKET--DIFKIIKEKK 77
Query: 207 NTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
T ++ S F ++A I G E E A + G ++L DR +QIT R WE
Sbjct: 78 ATLLLINLVISSFQKRIAKQFGINAGQEMIQGAESAKEIGANLVLADRNIQITFARIWEG 137
Query: 264 MPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
+ W K+KLL F ED++ L++M DML +++E + FP L L+
Sbjct: 138 VGFWGKVKLLTGIFVSIF---DDEDISEEDLEKMKSQDMLNSILKEFTVNFPKLKVPLID 194
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKV 382
ERDQY+S + + + VVAV+G H+ GIK K HDL + ALKV
Sbjct: 195 ERDQYLSQKIKE--APGTKVVAVLGAAHVPGIKEELKND---HDLARLSQVPAKSKALKV 249
Query: 383 LS 384
+
Sbjct: 250 IG 251
>gi|72027001|ref|XP_787913.1| PREDICTED: traB domain-containing protein-like [Strongylocentrotus
purpuratus]
Length = 431
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 22/222 (9%)
Query: 122 PEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR 181
P+ELP +V +T + A+ +Y+VGTAH S+ S +V I ++P +V LELC R
Sbjct: 131 PDELPDTVTKMTTEHGAQ-----IYIVGTAHFSENSQNDVAKTIQAVQPDIVLLELCRGR 185
Query: 182 VSMLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASHLE----IFPGSEF 232
+S+L + + +M K K+ G + L +++HL + PG EF
Sbjct: 186 LSILELDEETLLEEAKNFNMAKLRQSIKQSGVVGGIMQALLLNLSAHLTKELGMAPGGEF 245
Query: 233 RVAFEEAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR 291
R A EA G K+ LGDRP+QITL+R + W K+KL + + + S E + +
Sbjct: 246 RTAVREAQTVPGCKLHLGDRPIQITLKRAMASLSPWQKLKLAW------YLITSKEPITK 299
Query: 292 -MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL 332
+++ D+L ++ EM+ FP L V ERD Y+S +L
Sbjct: 300 EEVEKFKQKDLLEEMLGEMTGDFPALSRVFVSERDTYLSQSL 341
>gi|444707860|gb|ELW49017.1| TraB domain-containing protein [Tupaia chinensis]
Length = 486
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 143/282 (50%), Gaps = 35/282 (12%)
Query: 117 TKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLE 176
T++ +LPR+V L AE G+ VY+VGTAH S +S R+V I L+P VV +E
Sbjct: 161 TRRREQPDLPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDVVKTIRELQPDVVVVE 215
Query: 177 LCSSRVSMLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIF 227
LC RVSML + + + + K +++ L L KV++H L +
Sbjct: 216 LCQYRVSMLKMDERTLLREAKEISLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGMA 275
Query: 228 PGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSA 286
PG EFR AF+EA K K LGDRP+ +T +R + W K+KL + F + + S
Sbjct: 276 PGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SK 334
Query: 287 EDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE-------- 338
+D+ R ++ D+L ++ EM FP L T+V ERD Y++ L + A
Sbjct: 335 DDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYMLRQAARRLELPRASD 390
Query: 339 -------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
S VV VVG GH+ GI+ W + + ++MT+P P
Sbjct: 391 AEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIMTVPPP 432
>gi|379011231|ref|YP_005269043.1| hypothetical protein Awo_c13700 [Acetobacterium woodii DSM 1030]
gi|375302020|gb|AFA48154.1| hypothetical protein Awo_c13700 [Acetobacterium woodii DSM 1030]
Length = 388
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 106/215 (49%), Gaps = 9/215 (4%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+GTAHVSK S EV I +P + +EL R + + T ++V + K
Sbjct: 14 EIILIGTAHVSKNSVDEVHETIKAEQPDSICIELDQQRYEAINQKEKWSNT--DIVQIIK 71
Query: 204 KKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
K F IL S + K+A I G E A +YG +++L DR +QIT R
Sbjct: 72 SKRAGFMFVNILLSNYQRKLAEQFGIESGQEMMEGMACAKEYGAELVLADRSIQITFNRI 131
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W LW KIK+L+S + + E L+ + DMLT + EM AF + + L
Sbjct: 132 WRGCSLWEKIKVLFSIILSV--VDDEEITEEDLESLKSDDMLTAALSEMGSAFKGVKKYL 189
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
V ERDQY++ + E VVAV+G H+ GIK
Sbjct: 190 VDERDQYLAYKIKNAPGEK--VVAVLGAAHVPGIK 222
>gi|45655685|ref|YP_003494.1| pheromone shutdown protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421086600|ref|ZP_15547448.1| TraB family protein [Leptospira santarosai str. HAI1594]
gi|421103747|ref|ZP_15564343.1| TraB family protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45602656|gb|AAS72131.1| pheromone shutdown protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410366228|gb|EKP21620.1| TraB family protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410430629|gb|EKP74992.1| TraB family protein [Leptospira santarosai str. HAI1594]
Length = 408
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 123/236 (52%), Gaps = 12/236 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G +V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 30 GKTNVTILGTAHISQKSIDEVQRIIRKEKPDTVCVELCNSRIRSLKDSEHWKKLDIFKVF 89
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A E K G K++ DR V T
Sbjct: 90 KERKMYLLLSSLILSAFQKKLGKGS----IRPGDEMRMAIYEGEKIGAKIVPIDREVSTT 145
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + +++++ LL + L F ED++ ++EM D+L + ++ K + +
Sbjct: 146 LKRAWWNIGIFNRLFLLSALLTSLFV---KEDISEEKIEEMKSEDVLKDLFSQLPKRYES 202
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
+ ++ ERD Y++ + A E V AVVG GHLQGI N+ ++ + L +P
Sbjct: 203 IKNVIIDERDSYLAQKIRNSAKEGKKVFAVVGAGHLQGILNHVQEERDISKLDELP 258
>gi|12857145|dbj|BAB30908.1| unnamed protein product [Mus musculus]
Length = 422
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 138/274 (50%), Gaps = 35/274 (12%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LPR+V L AE G+ VY+VGTAH S +S R+V I ++P VV +ELC RVSM
Sbjct: 59 LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSM 113
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + V + K +++ L L KV++H L + PG EFR A
Sbjct: 114 LKMDERTLLREAKEVSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 173
Query: 236 FEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F+EA K K LGDRP+ +T +R + W K+KL + F + + S +D+ R +
Sbjct: 174 FKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVERCKQ 232
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHS-------------- 340
+ D+L ++ EM FP L T+V ERD Y++ L + A
Sbjct: 233 K----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYMLRQAARRRELPRASDAEPRKCVP 288
Query: 341 -SVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
VV VVG GH+ GI+ W + + ++MT+P P
Sbjct: 289 SVVVGVVGMGHVPGIEKNWSTDLNIQEIMTVPPP 322
>gi|15594761|ref|NP_212550.1| hypothetical protein BB_0416 [Borrelia burgdorferi B31]
gi|216264864|ref|ZP_03436856.1| pheromone shutdown protein [Borrelia burgdorferi 156a]
gi|2688316|gb|AAC66783.1| pheromone shutdown protein [Borrelia burgdorferi B31]
gi|215981337|gb|EEC22144.1| pheromone shutdown protein [Borrelia burgdorferi 156a]
Length = 404
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 135/264 (51%), Gaps = 15/264 (5%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+Y++GTAHVSK+S + +I+ LKP + +EL +R + N +D K
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTNENEKWRNLDIDKALK 86
Query: 205 KHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+R
Sbjct: 87 QGKAFFLIINIILSNFQKKLAKEQGIKPGEEMKTAILKAKKHNIPLILADRKIETTLKRA 146
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W +P++ K K++ S F L A+ ++++ + D L+ +++E+SK P + + L
Sbjct: 147 WISIPIFEKAKIISSL----FSLTDAKITKDEIEKLKEQDALSKIMEELSKEIPKVKKVL 202
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS----PKPA 376
+ ERD+++++ +L+ ++A+VG GH+ GI K+ ++ + PK
Sbjct: 203 IDERDEFITNKILE---GEGIILAIVGAGHVSGIMRTLKEISQNKKIINVEELEKIPKKH 259
Query: 377 VSALKVLSSLGVAVAGVAIISGIY 400
S KVLS L + I+S Y
Sbjct: 260 FSFSKVLSYLIAISIILLIVSSFY 283
>gi|218249773|ref|YP_002374930.1| pheromone shutdown protein [Borrelia burgdorferi ZS7]
gi|226320526|ref|ZP_03796090.1| pheromone shutdown protein [Borrelia burgdorferi 29805]
gi|226321729|ref|ZP_03797255.1| pheromone shutdown protein [Borrelia burgdorferi Bol26]
gi|387826066|ref|YP_005805519.1| pheromone shutdown protein [Borrelia burgdorferi JD1]
gi|218164961|gb|ACK75022.1| pheromone shutdown protein [Borrelia burgdorferi ZS7]
gi|226232918|gb|EEH31671.1| pheromone shutdown protein [Borrelia burgdorferi Bol26]
gi|226234064|gb|EEH32781.1| pheromone shutdown protein [Borrelia burgdorferi 29805]
gi|312148234|gb|ADQ30893.1| pheromone shutdown protein [Borrelia burgdorferi JD1]
Length = 404
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 135/264 (51%), Gaps = 15/264 (5%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+Y++GTAHVSK+S + +I+ LKP + +EL +R + N +D K
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTNENEKWRNLDIDKALK 86
Query: 205 KHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+R
Sbjct: 87 QGKAFFLIINIILSNFQKKLAKEQGIKPGEEMKTAILKAKKHNIPLILADRKIETTLKRA 146
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W +P++ K K++ S F L A+ ++++ + D L+ +++E+SK P + + L
Sbjct: 147 WISIPIFEKAKIISSL----FSLTDAKITKDEIEKLKEQDALSKIMEELSKEIPKVKKVL 202
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS----PKPA 376
+ ERD+++++ +L+ ++A+VG GH+ GI K+ ++ + PK
Sbjct: 203 IDERDEFITNKILE---GEGIILAIVGAGHVSGIMRTLKEISQNKKIINVEELEKIPKKH 259
Query: 377 VSALKVLSSLGVAVAGVAIISGIY 400
S KVLS L + I+S Y
Sbjct: 260 FSFSKVLSYLIAISIILLIVSSFY 283
>gi|348551604|ref|XP_003461620.1| PREDICTED: traB domain-containing protein [Cavia porcellus]
Length = 376
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 157/312 (50%), Gaps = 38/312 (12%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 37 SDVDAFNLLLEMKLKRRREQPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDV 90
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWF 216
I ++P VV +ELC RVSML + + V++ K +++ L
Sbjct: 91 VKTIREVQPDVVVVELCQYRVSMLKMDERTLLREAKEVNLEKLQQAVRQNGLMSGLMQML 150
Query: 217 LAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIK 271
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W K+K
Sbjct: 151 LLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVK 210
Query: 272 LLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSST 331
L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y++
Sbjct: 211 LAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDIYLTYM 265
Query: 332 LLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPA 376
L + A S VV VVG GH+ GI+ W + + ++MT+P P A
Sbjct: 266 LRQAARRLELPRASEAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIMTVPPPSVA 325
Query: 377 --VSALKVLSSL 386
VS L V ++
Sbjct: 326 GRVSRLAVKAAF 337
>gi|24217187|ref|NP_714670.1| pheromone shutdown protein [Leptospira interrogans serovar Lai str.
56601]
gi|386076141|ref|YP_005990330.1| pheromone shutdown protein [Leptospira interrogans serovar Lai str.
IPAV]
gi|418691021|ref|ZP_13252128.1| TraB family protein [Leptospira interrogans str. FPW2026]
gi|418699073|ref|ZP_13260040.1| TraB family protein [Leptospira interrogans serovar Bataviae str.
L1111]
gi|24202233|gb|AAN51685.1|AE011601_8 pheromone shutdown protein [Leptospira interrogans serovar Lai str.
56601]
gi|353459803|gb|AER04347.1| pheromone shutdown protein [Leptospira interrogans serovar Lai str.
IPAV]
gi|400360057|gb|EJP16038.1| TraB family protein [Leptospira interrogans str. FPW2026]
gi|410761933|gb|EKR28104.1| TraB family protein [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 408
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 123/236 (52%), Gaps = 12/236 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G +V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 30 GKTNVTILGTAHISQKSIDEVQRIIRKEKPDTVCVELCNSRIRSLKDSEHWKKLDIFKVF 89
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A E K G K++ DR V T
Sbjct: 90 KERKMYLLLSSLILSAFQKKLGKGS----IRPGDEMRMAIYEGEKIGAKIVPIDREVSTT 145
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + +++++ LL + L F ED++ ++EM D+L + ++ K + +
Sbjct: 146 LKRAWWNIGIFNRLFLLSALLTSLFV---KEDISEEKIEEMKSEDVLKDLFSQLPKRYES 202
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
+ ++ ERD Y++ + A E V AVVG GHLQGI N+ ++ + L +P
Sbjct: 203 IKNVIIDERDSYLAQKIRDSAKEGKKVFAVVGAGHLQGILNHVQEERDISKLDELP 258
>gi|354494956|ref|XP_003509599.1| PREDICTED: traB domain-containing protein [Cricetulus griseus]
gi|344244933|gb|EGW01037.1| TraB domain-containing protein [Cricetulus griseus]
Length = 376
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 149/297 (50%), Gaps = 36/297 (12%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 37 SDVDAFNLLLEMKLKRRRERPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDV 90
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWF 216
I ++P VV +ELC RVSML + + V + K K++ L
Sbjct: 91 VKTIREVQPDVVVVELCQYRVSMLKMDERTLLREAKEVSLEKLQQAVKQNGLMSGLMQML 150
Query: 217 LAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIK 271
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W K+K
Sbjct: 151 LLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVK 210
Query: 272 LLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSST 331
L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y++
Sbjct: 211 LAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYM 265
Query: 332 LLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
L + A S VV VVG GH+ GI+ W + + ++MT+P P
Sbjct: 266 LRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIMTVPPP 322
>gi|402571763|ref|YP_006621106.1| pheromone shutdown-related protein TraB [Desulfosporosinus meridiei
DSM 13257]
gi|402252960|gb|AFQ43235.1| pheromone shutdown-related protein TraB [Desulfosporosinus meridiei
DSM 13257]
Length = 391
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 119/242 (49%), Gaps = 14/242 (5%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKH 206
L+GTAHVSK+S V+ +I+ +P V +EL R + N T ++ + K+K
Sbjct: 20 LIGTAHVSKQSAELVKEVIEAERPDSVCIELDEPRYQTIVEGNKWKET--DIFKIIKEKK 77
Query: 207 NTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
T ++ S F ++A I G E E A + G ++L DR +QIT R W+
Sbjct: 78 ATLLLINLVISSFQKRLAKQFGINAGQEMIQGAESAKEIGANLVLADRNIQITFSRIWQG 137
Query: 264 MPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
+ W K+KLL F F ED++ L++M DML ++ E + +FP L L+
Sbjct: 138 VGFWGKVKLLSGIFFSIF---DDEDISEEDLEKMKSQDMLNSILNEFTVSFPKLKLPLID 194
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKV 382
ERDQY++ + S VVAV+G H+ GIK K+ HDL + LK+
Sbjct: 195 ERDQYLAQKIKD--APGSKVVAVLGAAHVPGIKEELKRE---HDLAKLSEVPAKSKTLKI 249
Query: 383 LS 384
+
Sbjct: 250 IG 251
>gi|387827328|ref|YP_005806610.1| pheromone shutdown protein [Borrelia burgdorferi N40]
gi|312149738|gb|ADQ29809.1| pheromone shutdown protein [Borrelia burgdorferi N40]
Length = 404
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 135/264 (51%), Gaps = 15/264 (5%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+Y++GTAHVSK+S + +I+ LKP + +EL +R + N +D K
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTNENEKWRNLDIDKALK 86
Query: 205 KHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+R
Sbjct: 87 QGKAFFLIINIILSNFQKKLAKEQGIKPGEEMKTAILKAKKHNIPLILADRKIETTLKRA 146
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W +P++ K K++ S F L A+ ++++ + D L+ +++E+SK P + + L
Sbjct: 147 WISIPIFEKAKIISSL----FSLTDAKITKDEIEKLKEQDALSKIMEELSKEIPKVKKVL 202
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS----PKPA 376
+ ERD+++++ +L+ ++A+VG GH+ GI K+ ++ + PK
Sbjct: 203 IDERDEFITNKILEGT---GIILAIVGAGHVSGIMRTLKEISQNKKIINVEELEKIPKKH 259
Query: 377 VSALKVLSSLGVAVAGVAIISGIY 400
S KVLS L + I+S Y
Sbjct: 260 FSFSKVLSYLIAISIILLIVSSFY 283
>gi|417761282|ref|ZP_12409295.1| TraB family protein [Leptospira interrogans str. 2002000624]
gi|417766508|ref|ZP_12414460.1| TraB family protein [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|417772596|ref|ZP_12420484.1| TraB family protein [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417776606|ref|ZP_12424440.1| TraB family protein [Leptospira interrogans str. 2002000621]
gi|417786889|ref|ZP_12434574.1| TraB family protein [Leptospira interrogans str. C10069]
gi|418666073|ref|ZP_13227504.1| TraB family protein [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418674801|ref|ZP_13236099.1| TraB family protein [Leptospira interrogans str. 2002000623]
gi|418681854|ref|ZP_13243076.1| TraB family protein [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418704923|ref|ZP_13265790.1| TraB family protein [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418710588|ref|ZP_13271358.1| TraB family protein [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418712671|ref|ZP_13273404.1| TraB family protein [Leptospira interrogans str. UI 08452]
gi|418725403|ref|ZP_13284021.1| TraB family protein [Leptospira interrogans str. UI 12621]
gi|418733764|ref|ZP_13290875.1| TraB family protein [Leptospira interrogans str. UI 12758]
gi|421116001|ref|ZP_15576394.1| TraB family protein [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|421119480|ref|ZP_15579800.1| TraB family protein [Leptospira interrogans str. Brem 329]
gi|421128415|ref|ZP_15588630.1| TraB family protein [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135812|ref|ZP_15595932.1| TraB family protein [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|400326371|gb|EJO78638.1| TraB family protein [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400351335|gb|EJP03575.1| TraB family protein [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|409942823|gb|EKN88427.1| TraB family protein [Leptospira interrogans str. 2002000624]
gi|409945273|gb|EKN95289.1| TraB family protein [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409949741|gb|EKO04274.1| TraB family protein [Leptospira interrogans str. C10069]
gi|409961040|gb|EKO24787.1| TraB family protein [Leptospira interrogans str. UI 12621]
gi|410012497|gb|EKO70595.1| TraB family protein [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410020117|gb|EKO86922.1| TraB family protein [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410347631|gb|EKO98504.1| TraB family protein [Leptospira interrogans str. Brem 329]
gi|410434140|gb|EKP83281.1| TraB family protein [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410573518|gb|EKQ36566.1| TraB family protein [Leptospira interrogans str. 2002000621]
gi|410578238|gb|EKQ46101.1| TraB family protein [Leptospira interrogans str. 2002000623]
gi|410758020|gb|EKR19619.1| TraB family protein [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410765536|gb|EKR36236.1| TraB family protein [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410769177|gb|EKR44420.1| TraB family protein [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410772945|gb|EKR52977.1| TraB family protein [Leptospira interrogans str. UI 12758]
gi|410790867|gb|EKR84555.1| TraB family protein [Leptospira interrogans str. UI 08452]
gi|455669822|gb|EMF34880.1| TraB family protein [Leptospira interrogans serovar Pomona str. Fox
32256]
gi|455788460|gb|EMF40437.1| TraB family protein [Leptospira interrogans serovar Lora str. TE
1992]
gi|456971209|gb|EMG11869.1| TraB family protein [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 408
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 123/236 (52%), Gaps = 12/236 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G +V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 30 GKTNVTILGTAHISQKSIDEVQRIIRKEKPDTVCVELCNSRIRSLKDSEHWKKLDIFKVF 89
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A E K G K++ DR V T
Sbjct: 90 KERKMYLLLSSLILSAFQKKLGKGS----IRPGDEMRMAIYEGEKIGAKIVPIDREVSTT 145
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + +++++ LL + L F ED++ ++EM D+L + ++ K + +
Sbjct: 146 LKRAWWNIGIFNRLFLLSALLTSLFV---KEDISEEKIEEMKSEDVLKDLFSQLPKRYES 202
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
+ ++ ERD Y++ + A E V AVVG GHLQGI N+ ++ + L +P
Sbjct: 203 IKNVIIDERDSYLAQKIRDSAKEGKKVFAVVGAGHLQGILNHVQEERDISKLDELP 258
>gi|224532673|ref|ZP_03673291.1| pheromone shutdown protein [Borrelia burgdorferi WI91-23]
gi|224512401|gb|EEF82784.1| pheromone shutdown protein [Borrelia burgdorferi WI91-23]
Length = 404
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 135/264 (51%), Gaps = 15/264 (5%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+Y++GTAHVSK+S + +I+ LKP + +EL +R + N +D K
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTNENEKWRNLDIDKALK 86
Query: 205 KHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+R
Sbjct: 87 QGKAFFLIINIILSNFQKKLAKEQGIKPGEEMKTAILKAKKHNIPLILADRKIETTLKRA 146
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W +P++ K K++ S F L A+ ++++ + D L+ +++E+SK P + + L
Sbjct: 147 WISIPIFEKAKIISSL----FSLTDAKITKDEIEKLKEQDALSKIMEELSKEIPKVKKVL 202
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS----PKPA 376
+ ERD+++++ +L+ ++A+VG GH+ GI K+ ++ + PK
Sbjct: 203 IDERDEFITNKILEGT---GIILAIVGAGHVSGIMRTLKEISQNKKIINVEELEKIPKKH 259
Query: 377 VSALKVLSSLGVAVAGVAIISGIY 400
S KVLS L + I+S Y
Sbjct: 260 FSFSKVLSYLIAISIILLIVSSFY 283
>gi|221217729|ref|ZP_03589197.1| pheromone shutdown protein [Borrelia burgdorferi 72a]
gi|221192406|gb|EEE18625.1| pheromone shutdown protein [Borrelia burgdorferi 72a]
Length = 404
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 135/264 (51%), Gaps = 15/264 (5%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+Y++GTAHVSK+S + +I+ LKP + +EL +R + N +D K
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTNENEKWRNLDIDKALK 86
Query: 205 KHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+R
Sbjct: 87 QGKAFFLIINIILSNFQKKLAKEQGIKPGEEMKTAILKAKKHNIPLILADRKIETTLKRA 146
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W +P++ K K++ S F L A+ ++++ + D L+ +++E+SK P + + L
Sbjct: 147 WISIPIFEKAKIISSL----FSLTDAKITKDEIEKLKEQDALSKIMEELSKEIPKVKKVL 202
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS----PKPA 376
+ ERD+++++ +L+ ++A+VG GH+ GI K+ ++ + PK
Sbjct: 203 IDERDEFITNKILEGT---GIILAIVGAGHVSGIMRTLKEISQNKKIINVEELEKIPKKH 259
Query: 377 VSALKVLSSLGVAVAGVAIISGIY 400
S KVLS L + I+S Y
Sbjct: 260 FSFSKVLSYLIAISIILLIVSSFY 283
>gi|343127726|ref|YP_004777657.1| traB family protein [Borrelia bissettii DN127]
gi|342222414|gb|AEL18592.1| traB family protein [Borrelia bissettii DN127]
Length = 404
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 136/264 (51%), Gaps = 15/264 (5%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+Y++GTAHVSK+S + +I+ LKP + +EL +R + N +D K
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTNENEKWRNLDIDKALK 86
Query: 205 KHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+R
Sbjct: 87 QGRAFFLIINIILSNFQKKLAKEQGIKPGEEMKTAILKAKKHNIPLILADRKIETTLKRA 146
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W +P++ K K++ S F L A+ ++++ + D L+ +++E+SK P + + L
Sbjct: 147 WISIPIFEKAKIISSL----FSLTDAKITKDEIEKLKEQDALSKIMEELSKEIPKVKKVL 202
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS----PKPA 376
+ ERD+++++ +L+ ++AVVG GH+ GI K+ + ++ + PK
Sbjct: 203 IDERDEFITNKILEGT---GIILAVVGAGHVNGIIRTLKEISQNNKIINVEELDRVPKKH 259
Query: 377 VSALKVLSSLGVAVAGVAIISGIY 400
S K+LS L + I+S Y
Sbjct: 260 FSFSKMLSYLIAISIILLIVSSFY 283
>gi|195942257|ref|ZP_03087639.1| pheromone shutdown protein (traB) [Borrelia burgdorferi 80a]
gi|224533861|ref|ZP_03674449.1| pheromone shutdown protein [Borrelia burgdorferi CA-11.2a]
gi|225549142|ref|ZP_03770117.1| pheromone shutdown protein [Borrelia burgdorferi 94a]
gi|225549574|ref|ZP_03770540.1| pheromone shutdown protein [Borrelia burgdorferi 118a]
gi|224513154|gb|EEF83517.1| pheromone shutdown protein [Borrelia burgdorferi CA-11.2a]
gi|225369851|gb|EEG99298.1| pheromone shutdown protein [Borrelia burgdorferi 118a]
gi|225370368|gb|EEG99806.1| pheromone shutdown protein [Borrelia burgdorferi 94a]
Length = 404
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 135/264 (51%), Gaps = 15/264 (5%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+Y++GTAHVSK+S + +I+ LKP + +EL +R + N +D K
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTNENEKWRNLDIDKALK 86
Query: 205 KHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+R
Sbjct: 87 QGKAFFLIINIILSNFQKKLAKEQGIKPGEEMKTAILKAKKHNIPLILADRKIETTLKRA 146
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W +P++ K K++ S F L A+ ++++ + D L+ +++E+SK P + + L
Sbjct: 147 WISIPIFEKAKIISSL----FSLTDAKITKDEIEKLKEQDALSKIMEELSKEIPKVKKVL 202
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS----PKPA 376
+ ERD+++++ +L+ ++A+VG GH+ GI K+ ++ + PK
Sbjct: 203 IDERDEFITNKILEGT---GIILAIVGAGHVSGIMRTLKEISQNKKIINVEELEKIPKKH 259
Query: 377 VSALKVLSSLGVAVAGVAIISGIY 400
S KVLS L + I+S Y
Sbjct: 260 FSFSKVLSYLIAISIILLIVSSFY 283
>gi|223888756|ref|ZP_03623347.1| pheromone shutdown protein [Borrelia burgdorferi 64b]
gi|223885572|gb|EEF56671.1| pheromone shutdown protein [Borrelia burgdorferi 64b]
Length = 404
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 135/264 (51%), Gaps = 15/264 (5%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+Y++GTAHVSK+S + +I+ LKP + +EL +R + N +D K
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTNENEKWRNLDIDKALK 86
Query: 205 KHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+R
Sbjct: 87 QGKAFFLIINIILSNFQKKLAKEQGIKPGEEMKTAILKAKKHNIPLILADRKIETTLKRA 146
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W +P++ K K++ S F L A+ ++++ + D L+ +++E+SK P + + L
Sbjct: 147 WISIPIFEKAKIISSL----FSLTDAKITKDEIEKLKEQDALSKIMEELSKEIPKVKKVL 202
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS----PKPA 376
+ ERD+++++ +L+ ++A+VG GH+ GI K+ ++ + PK
Sbjct: 203 IDERDEFITNKILEGT---GIILAIVGAGHVSGIMRTLKEISQNKKIINVEELEKIPKKH 259
Query: 377 VSALKVLSSLGVAVAGVAIISGIY 400
S KVLS L + I+S Y
Sbjct: 260 FSFSKVLSYLIAISIILLIVSSFY 283
>gi|395753591|ref|XP_002831340.2| PREDICTED: traB domain-containing protein [Pongo abelii]
Length = 392
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 171/355 (48%), Gaps = 47/355 (13%)
Query: 49 PLLSTRITSFATANDPNFPKMDPNPP-ESGEEFVHVDPLSESIVSLGDEVRDESSDRDET 107
PLL R S A ++ P + + PP E+ E V SE + + SD D
Sbjct: 2 PLL--RFPSGAGSHRPAMDREEQQPPREADVEPVVPSEASEPVPRVLSGDPQNLSDVDAF 59
Query: 108 NGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDF 167
N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V I
Sbjct: 60 NLLLEMKLKRRRQRPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDVVKTIRE 113
Query: 168 LKPQVVFLELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLA 218
++P VV +ELC RVSML Q L + + + V +++ L L
Sbjct: 114 VQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKLQQAV----RQNGLMSGLMQMLLL 169
Query: 219 KVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLL 273
KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W K++L
Sbjct: 170 KVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVRLA 229
Query: 274 YSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLL 333
+ F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y++ L
Sbjct: 230 WGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYMLR 284
Query: 334 KVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
+ A S VV VVG GH+ GI+ W + + ++MT+P P
Sbjct: 285 QAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIMTVPPP 339
>gi|88602858|ref|YP_503036.1| TraB family protein [Methanospirillum hungatei JF-1]
gi|88188320|gb|ABD41317.1| TraB family protein [Methanospirillum hungatei JF-1]
Length = 402
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 118/222 (53%), Gaps = 10/222 (4%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ ++GTAHVS+ S EV+ ID +P VV +EL R L Q K P E+ D+ +
Sbjct: 3 EIRIIGTAHVSQHSVDEVQQAIDEWQPDVVAIELDQGRYLALKQQQ-KNP---EIEDILQ 58
Query: 204 KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K+ T +L W LA ++ + + PG+E + A A + K+ L DR +++TL R
Sbjct: 59 AKNFT-QLLVQWILAYIQRRIGMDVGVEPGAEMKAAINAAEERQVKLALIDRDIRVTLHR 117
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
W M L+ K K+ Y+ + DL ++E+ +++ ++E K P
Sbjct: 118 FWASMSLFEKFKMFYALIGSIAVADKTGDLID-IEELKKENVVEAAMEEFYKYSPRGAMA 176
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP 361
L+ ERD YMS L+++ + + V+AVVG GH +GI+ Y + P
Sbjct: 177 LIGERDAYMSHHLIRLGSANERVLAVVGAGHRKGIEQYLQNP 218
>gi|148672435|gb|EDL04382.1| TraB domain containing, isoform CRA_c [Mus musculus]
Length = 348
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 131/260 (50%), Gaps = 21/260 (8%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 65 SDVDAFNLLLEMKLKRRRERPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDV 118
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWF 216
I ++P VV +ELC RVSML + + V + K +++ L
Sbjct: 119 VKTIREVQPDVVVVELCQYRVSMLKMDERTLLREAKEVSLEKLQQAVRQNGLMSGLMQML 178
Query: 217 LAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIK 271
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W K+K
Sbjct: 179 LLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVK 238
Query: 272 LLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSST 331
L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y++
Sbjct: 239 LAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYM 293
Query: 332 LLKVATEHSSVVAVVGKGHL 351
L + A A G G L
Sbjct: 294 LRQAARRLELPRASDGDGKL 313
>gi|431899556|gb|ELK07519.1| TraB domain-containing protein [Pteropus alecto]
Length = 659
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 151/302 (50%), Gaps = 40/302 (13%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LPR+V L AE G+ VY+VGTAH S +S ++V I ++P VV +ELC RVSM
Sbjct: 342 LPRTVTELV----AEDGS-RVYVVGTAHFSDDSKKDVVKTIRAVQPDVVVVELCQYRVSM 396
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + V + K +++ L L KV++H L + PG EFR A
Sbjct: 397 LKMDERTLLREAREVSLEKLQQAVRQNGVMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 456
Query: 236 FEEAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F+EA K K LGDRP+ +T +R + W K+KL + F + + S +D+ R +
Sbjct: 457 FKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVERCKQ 515
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE---------------H 339
+ D+L ++ EM FP L T+V ERD Y++ L + A
Sbjct: 516 K----DLLEQMMAEMVGEFPDLHRTIVSERDIYLTYMLRQAARRLELPRSSDAEPRKCVP 571
Query: 340 SSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIIS-G 398
S VV VVG GH+ GI+ W + + ++MT+P P S +S L V VA + ++ G
Sbjct: 572 SVVVGVVGMGHVPGIEKNWTTDLNIQEIMTVPPP----SISGRVSRLAVKVAFLGLLGYG 627
Query: 399 IY 400
+Y
Sbjct: 628 LY 629
>gi|410942379|ref|ZP_11374166.1| TraB family protein [Leptospira noguchii str. 2006001870]
gi|410782634|gb|EKR71638.1| TraB family protein [Leptospira noguchii str. 2006001870]
Length = 408
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 124/236 (52%), Gaps = 12/236 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G +V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 30 GKTNVTILGTAHISQKSIDEVQRIIRKEKPDTVCVELCNSRIRSLKDSEHWKKLDIFKVF 89
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A +E K G K++ DR V T
Sbjct: 90 KERKMYLLLSSLILSAFQKKLGKGS----IRPGDEMRMAIDEGEKIGAKIVPIDREVSTT 145
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + +++++ LL + L F ED++ ++EM D+L + ++ K + +
Sbjct: 146 LKRAWWNIGIFNRLFLLSALLTSLFV---KEDISEEKIEEMKSEDVLKDLFSQLPKRYES 202
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
+ ++ ERD Y++ + A E V AVVG GHLQGI ++ ++ + L +P
Sbjct: 203 IKNVIIDERDSYLAQKIRDSAKEGKKVFAVVGAGHLQGILSHVQEEKDISKLDELP 258
>gi|148672434|gb|EDL04381.1| TraB domain containing, isoform CRA_b [Mus musculus]
Length = 422
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 149/297 (50%), Gaps = 36/297 (12%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 83 SDVDAFNLLLEMKLKRRRERPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDV 136
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWF 216
I ++P VV +ELC RVSML + + V + K +++ L
Sbjct: 137 VKTIREVQPDVVVVELCQYRVSMLKMDERTLLREAKEVSLEKLQQAVRQNGLMSGLMQML 196
Query: 217 LAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIK 271
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W K+K
Sbjct: 197 LLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVK 256
Query: 272 LLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSST 331
L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y++
Sbjct: 257 LAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYM 311
Query: 332 LLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
L + A S VV VVG GH+ GI+ W + + ++MT+P P
Sbjct: 312 LRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIMTVPPP 368
>gi|418696800|ref|ZP_13257804.1| TraB family protein [Leptospira kirschneri str. H1]
gi|409955410|gb|EKO14347.1| TraB family protein [Leptospira kirschneri str. H1]
Length = 408
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 123/236 (52%), Gaps = 12/236 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G +V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 30 GKTNVTILGTAHISQKSIDEVQRIIRKEKPDTVCVELCNSRMRSLKDSEHWKKLDIFKVF 89
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A E K G K++ DR V T
Sbjct: 90 KERKMYLLLSSLILSAFQKKLGKGS----IRPGDEMRMAIHEGEKIGAKIVPIDREVSTT 145
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + +++++ LL + L F ED++ ++EM D+L + ++ K + +
Sbjct: 146 LKRAWWNIGIFNRLFLLSALLTSLFV---KEDISEEKIEEMKSEDVLKDLFSQLPKRYES 202
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
+ ++ ERD Y++ + A E V AVVG GHLQGI N+ ++ + L +P
Sbjct: 203 IKNVIIDERDYYLAQKIRDSAKEGKKVFAVVGAGHLQGILNHVQEERDISKLDELP 258
>gi|242015641|ref|XP_002428459.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212513076|gb|EEB15721.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 334
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 123/235 (52%), Gaps = 29/235 (12%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP + ++L D ++ VYLVGTAH S++S +V +I ++P V LELC SR M
Sbjct: 96 LPDTTIVLETDWGSK-----VYLVGTAHFSEQSQEDVAKVIRAVQPNSVVLELCESRSYM 150
Query: 185 LTPQNLKVPTVGEMVD--MWKKKHNTFGI----LYSWFL---AKVASHLEIFPGSEFRVA 235
L + K+ + E ++ M K+ +G+ LY L A++ L + PG EFR A
Sbjct: 151 LQWKEEKILKIAEKMEFKMVKETIQNYGLQQGALYLLLLSVSAQITRELGMAPGGEFRRA 210
Query: 236 FEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
++EA+ G V+ LGDRP++ITLRR + + W IK + +F+ ++
Sbjct: 211 YKEAVNVPGCVVHLGDRPIEITLRRAFASLSWWQSIKFAFYVIFKD------------IE 258
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLL--KVATEHSSVVAVVG 347
+ + D L ++ + FP L V+ERD ++S +L+ + T + +++G
Sbjct: 259 KCKNRDYLEEMLAMLGGEFPELKNVFVNERDLFLSHSLVMASIMTNSAEEASILG 313
>gi|345776729|ref|XP_848728.2| PREDICTED: uncharacterized protein LOC607061 [Canis lupus
familiaris]
Length = 785
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 151/302 (50%), Gaps = 40/302 (13%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LPR+V L AE G+ VY+VGTAH S +S R+V I ++P VV +ELC RVSM
Sbjct: 468 LPRTVTELV----AEDGS-RVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSM 522
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + + + K +++ L L KV++H L + PG EFR A
Sbjct: 523 LKMDESTLLQEAKELSLEKLQQAVRQNGVMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 582
Query: 236 FEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F+EA K K LGDRP+ +T +R + W K+KL + F + + S +D+ R +
Sbjct: 583 FKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVERCKQ 641
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE---------------H 339
+ D+L ++ EM FP L T+V ERD Y++ L + A
Sbjct: 642 K----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYMLRQAARRLELPRSSDAEPRKCVP 697
Query: 340 SSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIIS-G 398
S VV VVG GH+ GI+ W + + ++MT+P P S LS L V A + ++ G
Sbjct: 698 SVVVGVVGMGHVPGIEKNWTTDLNIQEIMTVPPP----SVSGRLSRLAVKAAVLGLLGYG 753
Query: 399 IY 400
+Y
Sbjct: 754 LY 755
>gi|117606383|ref|NP_080761.2| traB domain-containing protein [Mus musculus]
gi|20141021|sp|Q99JY4.1|TRABD_MOUSE RecName: Full=TraB domain-containing protein
gi|13542738|gb|AAH05574.1| Trabd protein [Mus musculus]
gi|148672436|gb|EDL04383.1| TraB domain containing, isoform CRA_d [Mus musculus]
Length = 376
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 149/297 (50%), Gaps = 36/297 (12%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 37 SDVDAFNLLLEMKLKRRRERPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDV 90
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWF 216
I ++P VV +ELC RVSML + + V + K +++ L
Sbjct: 91 VKTIREVQPDVVVVELCQYRVSMLKMDERTLLREAKEVSLEKLQQAVRQNGLMSGLMQML 150
Query: 217 LAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIK 271
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W K+K
Sbjct: 151 LLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVK 210
Query: 272 LLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSST 331
L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y++
Sbjct: 211 LAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYM 265
Query: 332 LLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
L + A S VV VVG GH+ GI+ W + + ++MT+P P
Sbjct: 266 LRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIMTVPPP 322
>gi|15669555|ref|NP_248368.1| pheromone shutdown protein TraB [Methanocaldococcus jannaschii DSM
2661]
gi|41018430|sp|Q58760.1|Y1365_METJA RecName: Full=Uncharacterized protein MJ1365
gi|1592009|gb|AAB99373.1| pheromone shutdown protein (traB) [Methanocaldococcus jannaschii
DSM 2661]
Length = 397
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 125/228 (54%), Gaps = 10/228 (4%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDM 201
CD+YL+GTAHVSK+S EVE II + P+ + +EL R S++T + KV + +
Sbjct: 17 CDIYLIGTAHVSKDSIEEVEKIISSVSPEGIAVELDDRRFFSLITNEEKKVDLKKVLKEG 76
Query: 202 WKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTW 261
K + IL + K+ I PGSE + A E A KYG + L DR + ITL R
Sbjct: 77 NFLKFFIYLILANS-QKKIGESFGIKPGSEMKKAIEIASKYGLPIYLIDRDIDITLSRLM 135
Query: 262 EKMPLWHKIKLLYSFL--FQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
++M K+K+ + L + + LN M+K + L ++E+S PT+ E
Sbjct: 136 DRMTFKEKMKIFWELLNSDEEDLELDDDLLNDMVKNPEKFIKL---LKEIS---PTIYEV 189
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDL 367
LV ERD++M+ L +++ +S+VAVVG GH++GI Y K+ +D+
Sbjct: 190 LVDERDRFMAKRLFELSKNKNSLVAVVGAGHVEGIVRYLKKLENGNDI 237
>gi|374815453|ref|ZP_09719190.1| TraB family protein [Treponema primitia ZAS-1]
Length = 392
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 122/238 (51%), Gaps = 13/238 (5%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMW 202
+V L+GTAHVS+ES EV +I KP V +EL + R SM + + V ++
Sbjct: 14 EVILIGTAHVSRESIEEVAGVIREEKPDQVCVELDAGRYDSMAQKDSWEKLDVAKVFREG 73
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K ++ S F ++ + L + PG E ++A A + G DR +Q TL R W
Sbjct: 74 KGFLLMANLVLSSFQRRMGAELGVKPGEEMKIAINTATELGIPYTFCDRQIQTTLSRAWA 133
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLV 321
+ W K KLL S + AF + E L+ ++ + + L ++ E++ PT+ ETL+
Sbjct: 134 RCGFWSKSKLLASLVSSAF---TTEKLSETEIENLKNRSELDGMMSELADYLPTVKETLI 190
Query: 322 HERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNY------WKQPVPVHDLMTIPSP 373
ERD+Y+++ + T S VAVVG GHL GIK++ ++ V +L IP P
Sbjct: 191 DERDRYLAAKIWAGGT--SRQVAVVGAGHLMGIKSHLERISAGEENADVSELDKIPPP 246
>gi|351700573|gb|EHB03492.1| TraB domain-containing protein [Heterocephalus glaber]
Length = 376
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 159/326 (48%), Gaps = 36/326 (11%)
Query: 73 PPESGEEFVHVDPLSESIVSLGDEVRDESSDRDETNGAVPVPEETKKVLPEELPRSVVIL 132
P E+ E V SES+ + SD D + + + + ++ P LPR+V L
Sbjct: 8 PQEADVETVMTSGASESVPRVISGEAQNLSDVDAFHLLLEMKLKRRRKQPN-LPRTVTQL 66
Query: 133 TCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKV 192
AE G+ VY+VGTAH S +S R+V I ++P VV +ELC RVSML +
Sbjct: 67 V----AEDGS-RVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSMLKMDERTL 121
Query: 193 PTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG 243
+ V + K +++ L L KV++H L + PG EFR AF+EA K
Sbjct: 122 LREAKEVSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVP 181
Query: 244 -GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDML 302
K LGDRP+ +T +R + W K+KL + F + + S +D+ R ++ D+L
Sbjct: 182 FCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVERCKQK----DLL 236
Query: 303 TLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE---------------HSSVVAVVG 347
++ EM FP L T+V ERD Y++ L + A S VV VVG
Sbjct: 237 EQMMAEMIGEFPDLHRTIVAERDIYLTYMLRQAARRLELPRASEAEPRKCVPSVVVGVVG 296
Query: 348 KGHLQGIKNYWKQPVPVHDLMTIPSP 373
GH+ GI+ W + + ++MT+P P
Sbjct: 297 MGHVPGIEKNWSTELNIQEIMTVPPP 322
>gi|312137450|ref|YP_004004787.1| trab determinant protein [Methanothermus fervidus DSM 2088]
gi|311225169|gb|ADP78025.1| TraB determinant protein [Methanothermus fervidus DSM 2088]
Length = 261
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 123/241 (51%), Gaps = 30/241 (12%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ ++GTAHVS+ S +V+ I P+VV +EL R LT + ++ +++
Sbjct: 2 NIKIIGTAHVSERSVEDVKNTIIEENPEVVAVELDYRRYMRLTRDENQNTSILDIIKNGL 61
Query: 204 KKHN----TFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K + G++ ++ K + I PGS+ A + A + G KV+L DR ++ITL R
Sbjct: 62 KTGSLSVIIAGVILTYLQNKAGEDIGIKPGSDMIAAIKTAEEIGAKVVLIDRDIEITLSR 121
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDM--------LTLVIQEMSK 311
M L+ K+KL+++ +F +M D+D+ L +++E +
Sbjct: 122 AMNAMSLFEKLKLIFNIFLSSF-------------KMKDIDIEDLKKKDVLKKIMKEFKR 168
Query: 312 AFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPV---PVHDLM 368
P + +V ERD YM+ LL + +E +VAVVG GH +GI++Y K P P++ L+
Sbjct: 169 IAPNAYKVIVDERDAYMAYRLLNIDSEK--IVAVVGAGHKKGIEDYLKNPEKIPPIYKLL 226
Query: 369 T 369
Sbjct: 227 N 227
>gi|114687042|ref|XP_515215.2| PREDICTED: traB domain-containing protein [Pan troglodytes]
Length = 451
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 32/292 (10%)
Query: 59 ATANDPNFPKMDPNPPESGEEFVHVDPLSESIVSLGDEVRDESSDRDETNGAVPVPEETK 118
A + P + PP H+ PLS + + + +D D N + + + +
Sbjct: 130 AGSRRPAMDGEEQQPPHELSPLRHLPPLSPTPNLIHS---NPQADVDAFNLLLEMKLKRR 186
Query: 119 KVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELC 178
+ P LPR+V L AE G+ VY+VGTAH S +S R+V I ++P VV +ELC
Sbjct: 187 RQRPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELC 240
Query: 179 SSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASH----LE 225
RVSML Q L + + + V +++ L L KV++H L
Sbjct: 241 QYRVSMLKMDESTLLREAQELSLEKLQQAV----RQNGLMSGLMQMLLLKVSAHITEQLG 296
Query: 226 IFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLP 284
+ PG EFR AF+EA K K LGDRP+ +T +R + W K++L + F + +
Sbjct: 297 MAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVRLAWGLCFLSDPI- 355
Query: 285 SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA 336
S +D+ R ++ D+L ++ EM FP L T+V ERD Y++ L + A
Sbjct: 356 SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYMLRQAA 403
>gi|260804791|ref|XP_002597271.1| hypothetical protein BRAFLDRAFT_203438 [Branchiostoma floridae]
gi|229282534|gb|EEN53283.1| hypothetical protein BRAFLDRAFT_203438 [Branchiostoma floridae]
Length = 301
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 116/219 (52%), Gaps = 22/219 (10%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP +V L T +GG VY++GTAH S+ES ++V I+ ++P VV +ELC SRV++
Sbjct: 9 LPETVTTL---DTEDGG--KVYVIGTAHFSEESQQDVIKTIESVQPDVVLVELCKSRVNI 63
Query: 185 LT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVA 235
L +N+ + V + IL A + L + PG EFR A
Sbjct: 64 LQLDEKTLLEEAKNINIGKVKLAIKQSGLVTGLMQILLLHMSAHITEQLGMAPGGEFRTA 123
Query: 236 FEEAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-ML 293
F +A + KV LGDRP+QITL+R + +W K++L + + + S E +++ +
Sbjct: 124 FRQAQQVPSCKVHLGDRPIQITLQRAIAALSVWQKLRLAW------YMIMSKEPISKEEV 177
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL 332
++ D+L ++ EM+ FP L V ERDQY++ +L
Sbjct: 178 EKCKQRDLLEEMLAEMTGEFPALSRVFVTERDQYLAHSL 216
>gi|403282791|ref|XP_003932822.1| PREDICTED: traB domain-containing protein [Saimiri boliviensis
boliviensis]
Length = 376
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 156/316 (49%), Gaps = 44/316 (13%)
Query: 87 SESIVSLGDEVRDESSDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVY 146
SES+ + E SD D N + + + ++ P LPR+V L AE G+ VY
Sbjct: 23 SESVPRVLSEDPQNLSDVDAFNLLLEMKLKRRRQRPN-LPRTVTQLV----AEDGS-RVY 76
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTVGE 197
+VGTAH S +S R+V I ++P VV +ELC RVSML Q L + + +
Sbjct: 77 VVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKLQQ 136
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRP 252
V +++ L L KV++H L + PG EFR AF+EA K K LGDRP
Sbjct: 137 AV----RQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRP 192
Query: 253 VQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKA 312
+ +T +R + W K++L + F + + S +D+ R ++ D+L ++ EM
Sbjct: 193 IPVTFKRAIAALSFWQKVRLAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMVGE 247
Query: 313 FPTLMETLVHERDQYMSSTLLKVATE---------------HSSVVAVVGKGHLQGIKNY 357
FP L T+V ERD Y++ L + A S VV VVG GH+ GI+
Sbjct: 248 FPDLHRTIVSERDVYLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKN 307
Query: 358 WKQPVPVHDLMTIPSP 373
W + + ++MT+P P
Sbjct: 308 WSTDLNIQEIMTVPPP 323
>gi|37782444|gb|AAP34468.1| LP6054 [Homo sapiens]
gi|62202467|gb|AAH93029.1| TRABD protein [Homo sapiens]
gi|119593908|gb|EAW73502.1| hypothetical protein PP2447, isoform CRA_e [Homo sapiens]
gi|158257532|dbj|BAF84739.1| unnamed protein product [Homo sapiens]
Length = 292
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 122/243 (50%), Gaps = 28/243 (11%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LPR+V L AE G+ VY+VGTAH S +S R+V I ++P VV +ELC RVSM
Sbjct: 60 LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSM 114
Query: 185 LT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASH----LEIFPGSE 231
L Q L + + + V +++ L L KV++H L + PG E
Sbjct: 115 LKMDESTLLREAQELSLEKLQQAV----RQNGLMSGLMQMLLLKVSAHITEQLGMAPGGE 170
Query: 232 FRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN 290
FR AF+EA K K LGDRP+ +T +R + W K++L + F + + S +D+
Sbjct: 171 FREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVRLAWGLCFLSDPI-SKDDVE 229
Query: 291 RMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGH 350
R ++ D+L ++ EM FP L T+V ERD Y++ L + A A G G
Sbjct: 230 RCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYMLRQAARRLELPRASDGDGR 285
Query: 351 LQG 353
Q
Sbjct: 286 PQA 288
>gi|168036477|ref|XP_001770733.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677951|gb|EDQ64415.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 386
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 32/237 (13%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR----------------------V 182
VY+VGTAH+SK S +V +I+ ++P+ V +ELC SR +
Sbjct: 96 VYIVGTAHMSKLSANQVTRVINAVQPENVVIELCRSRHRRAGIMYDEAQTSDVKQGSKNL 155
Query: 183 SMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKY 242
++ N VG + + + +L + ++++ + G EFR A + A
Sbjct: 156 MSMSGDNFG-SAVGRSLKLGGRSALALRLLLAGVSKRLSASAGVATGEEFRAARKAAEAL 214
Query: 243 GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN---RMLKEMDDV 299
G +++LGDRP++ITL+R W + W + + L Q S ++LN L+ +
Sbjct: 215 GAQIVLGDRPIEITLQRAWRSLK-WDERLRFGATLVQGM---SDKNLNVSEESLQMLKSD 270
Query: 300 DMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLL--KVATEHSSVVAVVGKGHLQGI 354
D L+ + E+S FP+LM+ L+HERD Y++ +L K VV VVGKGHL+GI
Sbjct: 271 DALSAMFGELSSRFPSLMQPLIHERDMYLAWSLKRSKAVNGCKRVVGVVGKGHLRGI 327
>gi|224534645|ref|ZP_03675219.1| pheromone shutdown protein [Borrelia spielmanii A14S]
gi|224514114|gb|EEF84434.1| pheromone shutdown protein [Borrelia spielmanii A14S]
Length = 404
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 123/222 (55%), Gaps = 15/222 (6%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML--TPQNLKVPTVGEMVDMW 202
+Y++GTAHVSK+S + +I+ LKP + +EL +R + T +N K + +D
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTDENEKWRNLD--IDKA 84
Query: 203 KKKHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
++ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+
Sbjct: 85 LRQGKAFFLIINIILSNFQKKLAKEQGINPGEEMKTAILKAKKHNIPLILADRKIETTLK 144
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R W +P++ KIK++ S F L + ++++ + D L+ V++E+SK P + +
Sbjct: 145 RAWISIPIFEKIKIISSL----FSLTDTKITKDEIEKLKEQDALSKVMEELSKEIPKVKK 200
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
L+ ERD+++++ +L+ ++A+VG GH+ GI K+
Sbjct: 201 ALIDERDEFITNKILEGT---GIILAIVGAGHVNGIMRTLKE 239
>gi|449446067|ref|XP_004140793.1| PREDICTED: uncharacterized LOC101219560 [Cucumis sativus]
Length = 402
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 123/231 (53%), Gaps = 24/231 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
++LVGT+H+S +S ++VE ++ +KP V +ELC SR ++ + P +M+
Sbjct: 114 IWLVGTSHISPKSVKDVERVVRAVKPDNVVVELCRSRAGIMYTLDTGEPDQKLKSNMFSL 173
Query: 205 KHNTF--GILYSW----------------FLAKVASHLEIFPGSEFRVAFEEAMKYGGKV 246
+ F ++ S F +K++S + G EFR A + + + G ++
Sbjct: 174 SGDGFLGAVVRSINLGGQTALALRLLLAVFSSKISSDVNRPFGDEFRAARKASEEVGAQI 233
Query: 247 ILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVI 306
+LGDRP++ITL R W + K+ L+ S + + S D ++ + E D + +L +
Sbjct: 234 VLGDRPIEITLERAWNALIWTEKLSLVSSVIRG---ITSESDFSQNIDEESDGNGSSLQL 290
Query: 307 QE-MSKAFPTLMETLVHERDQYMSSTLL--KVATEHSSVVAVVGKGHLQGI 354
E + ++P+L++ L+HERD Y++ +L K + VV V+G+GH+ G+
Sbjct: 291 YEKLGFSYPSLLQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGV 341
>gi|216263857|ref|ZP_03435851.1| pheromone shutdown protein [Borrelia afzelii ACA-1]
gi|215979901|gb|EEC20723.1| pheromone shutdown protein [Borrelia afzelii ACA-1]
Length = 404
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 123/222 (55%), Gaps = 15/222 (6%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML--TPQNLKVPTVGEMVDMW 202
+Y++GTAHVSK+S + +I+ LKP + +EL +R + T +N K + +D
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTDENEKWRNLD--IDKA 84
Query: 203 KKKHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
++ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+
Sbjct: 85 LRQGKAFFLIINIILSNFQKKLAKEQGIKPGEEMKTAILKAKKHNIPLILADRKIETTLK 144
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R W +P++ KIK++ S F L + ++++ + D L+ V++E+SK P + +
Sbjct: 145 RAWISIPIFEKIKIISSL----FSLTDTKITKDEIEKLKEQDALSKVMEELSKEIPKVKK 200
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
L+ ERD+++++ +L+ ++A+VG GH+ GI K+
Sbjct: 201 ALIDERDEFITNKILE---GKGIILAIVGAGHVNGIMRTLKE 239
>gi|111115244|ref|YP_709862.1| pheromone shutdown protein [Borrelia afzelii PKo]
gi|384206911|ref|YP_005592632.1| traB family protein [Borrelia afzelii PKo]
gi|110890518|gb|ABH01686.1| pheromone shutdown protein [Borrelia afzelii PKo]
gi|342856794|gb|AEL69642.1| traB family protein [Borrelia afzelii PKo]
Length = 404
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 123/222 (55%), Gaps = 15/222 (6%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML--TPQNLKVPTVGEMVDMW 202
+Y++GTAHVSK+S + +I+ LKP + +EL +R + T +N K + +D
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTDENEKWRNLD--IDKA 84
Query: 203 KKKHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
++ F I+ S F K+A I PG E + A +A K+ +IL DR ++ TL+
Sbjct: 85 LRQGKAFFLIINIILSNFQKKLAKEQGIKPGEEMKTAILKAKKHNIPLILADRKIETTLK 144
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R W +P++ KIK++ S F L + ++++ + D L+ V++E+SK P + +
Sbjct: 145 RAWISIPIFEKIKIISSL----FSLTDTKITKDEIEKLKEQDALSKVMEELSKEIPKVKK 200
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
L+ ERD+++++ +L+ ++A+VG GH+ GI K+
Sbjct: 201 ALIDERDEFITNKILE---GKGIILAIVGAGHVNGIMRTLKE 239
>gi|330837798|ref|YP_004412439.1| TraB family protein [Sphaerochaeta coccoides DSM 17374]
gi|329749701|gb|AEC03057.1| TraB family protein [Sphaerochaeta coccoides DSM 17374]
Length = 412
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 142/271 (52%), Gaps = 25/271 (9%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK- 203
+ LVGTAH+S+ES EV +IID + P + +EL R + + E +D+ K
Sbjct: 36 ITLVGTAHISQESVTEVSSIIDQVNPDHICIELDKGRFRTKDQE-----SSWETMDLKKV 90
Query: 204 -KKHNTFGILYSWFLAKVASHLEI----FPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K+ F +L + LA + + PG E A A + G DR +Q+TL+
Sbjct: 91 LKEGKGFLLLANMVLASFQKRMSVQTGSAPGQEILGAAYIAQEKGIPFSFCDREIQVTLK 150
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R W K LW+K KLL + L AF E ++ L+++ + D+L ++ E+SK PT+ E
Sbjct: 151 RAWRKSSLWNKAKLLSTLLSSAFDKGELEAVD--LEKLKEQDVLQGMLDELSKELPTIKE 208
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQG-IKNYWK----QPVP-VHDLMTIPS 372
L+ ERD+Y++S++ ++ +VAV+G GH QG I+N + + P + D+ +P
Sbjct: 209 VLIDERDRYLASSIYSAPGKN--IVAVIGAGHAQGLIENMGRLDNGEMAPSLDDISDVP- 265
Query: 373 PKPAVSALKVLSSLGVAVAGVAIISGIYINC 403
PA A KV L + +A V +I +IN
Sbjct: 266 --PAGKAGKVAVWL-IPLALVGLIVAGFINA 293
>gi|147920983|ref|YP_685207.1| pheromone shutdown protein [Methanocella arvoryzae MRE50]
gi|110620603|emb|CAJ35881.1| putative pheromone shutdown protein (TraB family) [Methanocella
arvoryzae MRE50]
Length = 453
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 134/253 (52%), Gaps = 20/253 (7%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPT-VGEMVDM 201
+++LVGTAHVS++S REVE I+ P VV +EL R L P++ K + E++
Sbjct: 41 NIFLVGTAHVSEKSIREVEEAIEHYAPDVVAVELDDRRFKALQQPEDEKKNIEIKELL-- 98
Query: 202 WKKKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
K +N L + LA KV S + + PG+E A A K G V DR + +TL
Sbjct: 99 --KGNNLMIFLLQYMLAYVQRKVGSDVGVKPGAEMMAAVAAAQKKGIPVARIDRDIGVTL 156
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLPSAE-DLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
R W KM L K ++ YS + + + DL + KE D+++ +++E+ PT
Sbjct: 157 ARFWAKMTLREKFRMFYSLVLAMLGYGTDKIDLEEITKE----DVVSDLLEELRDFTPTA 212
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPV---PVHDLMTIPSP 373
LV ERD Y++ L+++ + V+ VVG GH +GI+ Y + P P+H L+ IP
Sbjct: 213 AVVLVDERDAYLAHNLIEIG-KTKRVLGVVGAGHREGIRKYIEHPEKVPPIHTLVEIPK- 270
Query: 374 KPAVSALKVLSSL 386
K +K++S+L
Sbjct: 271 KRKFPLVKIISAL 283
>gi|315924299|ref|ZP_07920522.1| pheromone shutdown protein TraB [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622370|gb|EFV02328.1| pheromone shutdown protein TraB [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 410
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 119/248 (47%), Gaps = 18/248 (7%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTV-GEMVDMWKKK 205
L+GTAHVS ES + V+ +ID P V +EL R +T + T +++ +
Sbjct: 39 LIGTAHVSSESAKLVQQVIDEQMPDTVCIELDQGRFQTITQKQAWSDTAFAQVLKDGRAG 98
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
IL S + K+A L + G E A + A G ++L DR +QIT R W+
Sbjct: 99 FMFINILLSHYQQKIAEQLGVQTGGEMLKAIDSAKDVGADIVLADRDIQITFNRIWQGSS 158
Query: 266 LWHKIKLLYSFLFQAF--FLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHE 323
LW K KL+ S + F S ED+ ++ +E DML + +S+ + + LV E
Sbjct: 159 LWEKCKLMVSIVLSLFDNETLSEEDIEQLKQE----DMLNASLMALSEHYHGIKRYLVDE 214
Query: 324 RDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKP-------- 375
RD Y+ + + ++ +VAVVG H+ GI WK+ + L T P PK
Sbjct: 215 RDTYLCEKIKRAPGQY--IVAVVGAAHIPGILKNWKETHNLEPLETAP-PKSKTGKVIGW 271
Query: 376 AVSALKVL 383
VSAL VL
Sbjct: 272 TVSALLVL 279
>gi|417400182|gb|JAA47053.1| Hypothetical protein [Desmodus rotundus]
Length = 395
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 145/292 (49%), Gaps = 39/292 (13%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LPR+V L AE G+ VY+VGTAH S +S ++V I ++P VV +ELC RVSM
Sbjct: 78 LPRTVTELV----AEDGS-RVYVVGTAHFSDDSKKDVVKTIRAVQPDVVVVELCQYRVSM 132
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + + + K +++ L L KV++H L + PG EFR A
Sbjct: 133 LKMDERTLLREAKEISLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 192
Query: 236 FEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F EA K K LGDRP+ +T +R + W K+KL + F + + S +D+ R +
Sbjct: 193 FREASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVERCKQ 251
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE---------------H 339
+ D+L ++ EM FP L T+V ERD Y++ L + A
Sbjct: 252 K----DLLEQMMAEMIGEFPDLHRTIVSERDIYLTYMLRQAARRLELPRSSDAEPRKCVP 307
Query: 340 SSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVA 391
S VV VVG GH+ GI+ W + +H++M +P P S +S L V VA
Sbjct: 308 SVVVGVVGMGHVPGIEKNWTTDLNIHEIMAVPPP----SISGRVSRLAVKVA 355
>gi|403236893|ref|ZP_10915479.1| hypothetical protein B1040_14069 [Bacillus sp. 10403023]
Length = 388
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 120/240 (50%), Gaps = 10/240 (4%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKKK 205
L+GTAHVSK S +V+ +I+ KP V +EL R SM+ K + +++ K
Sbjct: 18 LIGTAHVSKHSAEQVKEVIESEKPDSVCIELDEQRYQSMMEGNKWKEMDIFKVIKEKKAT 77
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S F ++AS L I G E E A + G +++L DR +Q+T R W +
Sbjct: 78 LLLMNLAISSFQKRMASQLGINAGQEMLQGIESAKEVGAELVLADRNIQVTFSRIWNAVG 137
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHER 324
K+KLL S ++ F S E + L++M DML ++ E S +FP L L+ ER
Sbjct: 138 FTGKMKLLMSIVYSIF---SNETITEEELEKMKSKDMLNSMLTEFSTSFPKLKTPLIDER 194
Query: 325 DQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLS 384
DQY++ + E VVAV+G H+ GI+ K+ HDL + P A K++
Sbjct: 195 DQYLAQKIKHAPGE--KVVAVLGAAHVPGIQEEIKKE---HDLKRLTQLPPKSKAPKIIG 249
>gi|410248004|gb|JAA11969.1| TraB domain containing [Pan troglodytes]
Length = 376
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 150/301 (49%), Gaps = 44/301 (14%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 38 SDVDAFNLLLEMKLKRRRQRPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSNDSKRDV 91
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGIL 212
I ++P VV +ELC RVSML Q L + + + V +++ L
Sbjct: 92 VKTIREVQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKLQQAV----RQNGLMSGL 147
Query: 213 YSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLW 267
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W
Sbjct: 148 MQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFW 207
Query: 268 HKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQY 327
K++L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y
Sbjct: 208 QKVRLAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVY 262
Query: 328 MSSTLLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS 372
++ L + A S VV VVG GH+ GI+ W + + ++MT+P
Sbjct: 263 LTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIMTVPP 322
Query: 373 P 373
P
Sbjct: 323 P 323
>gi|357609061|gb|EHJ66278.1| hypothetical protein KGM_13367 [Danaus plexippus]
Length = 480
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 126/251 (50%), Gaps = 24/251 (9%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP S L D A+ V L+GT H SK+S +V I+ LKP + +ELC RVS+
Sbjct: 228 LPPSATFLQNDDNAK-----VVLLGTVHFSKKSVEDVSEIVKVLKPNAILIELCRQRVSL 282
Query: 185 LT------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFL---AKVASHLEIFPGSEFRVA 235
L ++ K ++ D K + G+L++ L A +A L + PG EFR A
Sbjct: 283 LELDDRKFLEDAKNLNAQKIKDAVKGQSFMSGMLHAMLLKTYADIAKELGVAPGGEFRRA 342
Query: 236 FEEAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
+ E K G K+ LGDRP++IT+ R ++ + + ++LY P D ++ L+
Sbjct: 343 YHEMKKIPGCKLFLGDRPIRITIARAFQSLTVLELGQVLYHLTTSN---PKPLDKDQ-LE 398
Query: 295 EMDDVDMLTLVIQEMSK---AFPTLMETLVHERDQYMSSTLLKV--ATEHSSVVAVVGKG 349
D D + +E+++ AF + V ERD+ ++ +L + + E V+ VVG G
Sbjct: 399 RYKDKDYVHAQFEEITRQVPAFKKVFHVFVDERDKCLAFSLQECVRSVEKPRVLGVVGMG 458
Query: 350 HLQGIKNYWKQ 360
H+ GI Y+ Q
Sbjct: 459 HVDGIMKYYGQ 469
>gi|194226998|ref|XP_001914911.1| PREDICTED: traB domain-containing protein [Equus caballus]
Length = 377
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 161/325 (49%), Gaps = 41/325 (12%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S ++V
Sbjct: 38 SDVDAFNLLLEMKLKRRRERPN-LPRTVTELV----AEDGS-RVYVVGTAHFSDDSKKDV 91
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWF 216
I ++P VV +ELC RVSML + + + + K +++ L
Sbjct: 92 VKTIREVQPDVVVVELCQYRVSMLKMDESTLLREAKEISLEKLQQAVRQNGVMSGLMQML 151
Query: 217 LAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIK 271
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W K+K
Sbjct: 152 LLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVK 211
Query: 272 LLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSST 331
L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y++
Sbjct: 212 LAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYM 266
Query: 332 LLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPA 376
L + A S VV VVG GH+ GI+ W + + ++MT+P P
Sbjct: 267 LRQAARRLELPRSSDAEPRKCVPSVVVGVVGMGHVPGIEKNWTTDLNIQEIMTVPPP--- 323
Query: 377 VSALKVLSSLGVAVAGVAIIS-GIY 400
S +S L V A + ++ G+Y
Sbjct: 324 -SVSGRVSRLAVKAAFLGLLGYGLY 347
>gi|119593904|gb|EAW73498.1| hypothetical protein PP2447, isoform CRA_b [Homo sapiens]
Length = 392
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 170/355 (47%), Gaps = 47/355 (13%)
Query: 49 PLLSTRITSFATANDPNFPKMDPNPP-ESGEEFVHVDPLSESIVSLGDEVRDESSDRDET 107
PLL R+ + A + P + PP E+ E V SE + + SD D
Sbjct: 2 PLL--RLPTGAGSRRPAMDGEEQQPPHEANVEPVVPSEASEPVPRVLSGDPQNLSDVDAF 59
Query: 108 NGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDF 167
N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V I
Sbjct: 60 NLLLEMKLKRRRQRPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDVVKTIRE 113
Query: 168 LKPQVVFLELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLA 218
++P VV +ELC RVSML Q L + + + V +++ L L
Sbjct: 114 VQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKLQQAV----RQNGLMSGLMQMLLL 169
Query: 219 KVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLL 273
KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W K++L
Sbjct: 170 KVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVRLA 229
Query: 274 YSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLL 333
+ F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y++ L
Sbjct: 230 WGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYMLR 284
Query: 334 KVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
+ A S VV VVG GH+ GI+ W + + ++MT+P P
Sbjct: 285 QAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIMTVPPP 339
>gi|410214860|gb|JAA04649.1| TraB domain containing [Pan troglodytes]
gi|410293350|gb|JAA25275.1| TraB domain containing [Pan troglodytes]
gi|410352887|gb|JAA43047.1| TraB domain containing [Pan troglodytes]
Length = 376
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 150/301 (49%), Gaps = 44/301 (14%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 38 SDVDAFNLLLEMKLKRRRQRPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDV 91
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGIL 212
I ++P VV +ELC RVSML Q L + + + V +++ L
Sbjct: 92 VKTIREVQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKLQQAV----RQNGLMSGL 147
Query: 213 YSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLW 267
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W
Sbjct: 148 MQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFW 207
Query: 268 HKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQY 327
K++L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y
Sbjct: 208 QKVRLAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVY 262
Query: 328 MSSTLLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS 372
++ L + A S VV VVG GH+ GI+ W + + ++MT+P
Sbjct: 263 LTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIMTVPP 322
Query: 373 P 373
P
Sbjct: 323 P 323
>gi|33342278|ref|NP_079480.2| traB domain-containing protein [Homo sapiens]
gi|20141036|sp|Q9H4I3.1|TRABD_HUMAN RecName: Full=TraB domain-containing protein; AltName: Full=Protein
TTG2
gi|11125142|emb|CAC15001.1| hypothetical protein [Homo sapiens]
gi|103492027|gb|ABF71986.1| TTG2 [Homo sapiens]
gi|119593906|gb|EAW73500.1| hypothetical protein PP2447, isoform CRA_c [Homo sapiens]
Length = 376
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 150/301 (49%), Gaps = 44/301 (14%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 38 SDVDAFNLLLEMKLKRRRQRPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDV 91
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGIL 212
I ++P VV +ELC RVSML Q L + + + V +++ L
Sbjct: 92 VKTIREVQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKLQQAV----RQNGLMSGL 147
Query: 213 YSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLW 267
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W
Sbjct: 148 MQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFW 207
Query: 268 HKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQY 327
K++L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y
Sbjct: 208 QKVRLAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVY 262
Query: 328 MSSTLLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS 372
++ L + A S VV VVG GH+ GI+ W + + ++MT+P
Sbjct: 263 LTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIMTVPP 322
Query: 373 P 373
P
Sbjct: 323 P 323
>gi|397479553|ref|XP_003811078.1| PREDICTED: traB domain-containing protein [Pan paniscus]
Length = 376
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 150/301 (49%), Gaps = 44/301 (14%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 38 SDVDAFNLLLEMKLKRRRQRPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDV 91
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGIL 212
I ++P VV +ELC RVSML Q L + + + V +++ L
Sbjct: 92 VKTIREVQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKLQQAV----RQNGLMSGL 147
Query: 213 YSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLW 267
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W
Sbjct: 148 MQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFW 207
Query: 268 HKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQY 327
K++L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y
Sbjct: 208 QKVRLAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVY 262
Query: 328 MSSTLLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS 372
++ L + A S VV VVG GH+ GI+ W + + ++MT+P
Sbjct: 263 LTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIMTVPP 322
Query: 373 P 373
P
Sbjct: 323 P 323
>gi|355563786|gb|EHH20348.1| hypothetical protein EGK_03187 [Macaca mulatta]
gi|383421799|gb|AFH34113.1| traB domain-containing protein [Macaca mulatta]
gi|384942530|gb|AFI34870.1| traB domain-containing protein [Macaca mulatta]
Length = 376
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 150/301 (49%), Gaps = 44/301 (14%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 38 SDVDAFNLLLEMKLKRRRQQPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDV 91
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGIL 212
I ++P VV +ELC RVSML Q L + + + V +++ L
Sbjct: 92 VKTIREVQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKLQQAV----RQNGLMSGL 147
Query: 213 YSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLW 267
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W
Sbjct: 148 MQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFW 207
Query: 268 HKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQY 327
K++L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y
Sbjct: 208 QKVRLAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVY 262
Query: 328 MSSTLLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS 372
++ L + A S VV VVG GH+ GI+ W + + ++MT+P
Sbjct: 263 LTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIMTVPP 322
Query: 373 P 373
P
Sbjct: 323 P 323
>gi|402884643|ref|XP_003905785.1| PREDICTED: traB domain-containing protein [Papio anubis]
Length = 376
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 150/301 (49%), Gaps = 44/301 (14%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 38 SDVDAFNLLLEMKLKRRRQQPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDV 91
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGIL 212
I ++P VV +ELC RVSML Q L + + + V +++ L
Sbjct: 92 VKTIREVQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKLQQAV----RQNGLMSGL 147
Query: 213 YSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLW 267
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W
Sbjct: 148 MQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFW 207
Query: 268 HKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQY 327
K++L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y
Sbjct: 208 QKVRLAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVY 262
Query: 328 MSSTLLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS 372
++ L + A S VV VVG GH+ GI+ W + + ++MT+P
Sbjct: 263 LTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIMTVPP 322
Query: 373 P 373
P
Sbjct: 323 P 323
>gi|297741113|emb|CBI31844.3| unnamed protein product [Vitis vinifera]
Length = 380
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 120/234 (51%), Gaps = 26/234 (11%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT----------PQNLK-- 191
+++L+GT H+S S +VE +++ + P V +ELC SR + Q L+
Sbjct: 92 EIWLLGTTHISSFSAADVERVVEVVNPDNVVVELCRSRQVLAGIMYTSNHGELNQQLRSS 151
Query: 192 ---------VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKY 242
+G +++ + +L + F +K++S + G EFR A + + K
Sbjct: 152 MFSLSGTGFFGAIGRSINLGGQTALALRLLLAVFSSKISSDVNRPFGDEFRAARKASEKV 211
Query: 243 GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDML 302
G +++LGDRP++ITL R W + K+ L+ S + + S+E +KE+ D
Sbjct: 212 GAQIVLGDRPIEITLERAWNSLEWNEKLSLVISVIRG---ITSSELSTNEMKELSTDDST 268
Query: 303 TLVIQEMSKAFPTLMETLVHERDQYMSSTLL--KVATEHSSVVAVVGKGHLQGI 354
+ ++S A+P+L++ L+HERD Y++ +L K VV V+GKGH+ G+
Sbjct: 269 FQLYDQLSVAYPSLLQPLIHERDTYLAWSLKRSKAVNGGKRVVGVIGKGHMNGV 322
>gi|327273183|ref|XP_003221360.1| PREDICTED: traB domain-containing protein-like [Anolis
carolinensis]
Length = 374
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 145/285 (50%), Gaps = 37/285 (12%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP +V L +T EG VY+VGTAH S S R+V I ++P VV +ELC RVSM
Sbjct: 57 LPSTVTEL---ATEEGSK--VYVVGTAHFSDSSKRDVVKTIQEVQPDVVVVELCQYRVSM 111
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + +++ K K++ L L KV++H L + PG EFR A
Sbjct: 112 LKMDERTLLKEAKEINLEKLQQAIKQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 171
Query: 236 FEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F+EA + K LGDRP+ +T +R + W K+KL + F + + S +D+ + +
Sbjct: 172 FKEASRVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVEKCKQ 230
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSV------------ 342
+ D+L ++ EM FP L T+V ERD Y+ + +LK A + + +
Sbjct: 231 K----DLLEQMMAEMIGEFPDLHRTIVSERDIYL-TYMLKQAAKRTELPRASEAEPRRCV 285
Query: 343 ----VAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVL 383
V VVG GH+ GI+ W + + ++M++P P A LK++
Sbjct: 286 PSVVVGVVGMGHVPGIEKNWNTDLNIQEIMSVPPPSTASKILKLV 330
>gi|151553780|gb|AAI49348.1| TRABD protein [Bos taurus]
Length = 342
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 117/222 (52%), Gaps = 20/222 (9%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP +V L AE G+ VY+VGTAH S +S R+V I ++P VV +ELC RVSM
Sbjct: 60 LPHTVTELV----AEDGS-RVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSM 114
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + + + K +++ L L KV++H L + PG EFR A
Sbjct: 115 LKMDERTLLREAKEISLEKLQQAIRQNGVASGLMQMLLLKVSAHITEQLGVAPGGEFREA 174
Query: 236 FEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F+EA + K LGDRP+ +T +R + LW K+KL + F + + S +D+ R +
Sbjct: 175 FKEASRVPFCKFHLGDRPIPVTFKRAIAALSLWQKVKLAWGLCFLSDPI-SKDDVERCKQ 233
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA 336
+ D+L ++ EM FP L T+V ERD Y++ L + A
Sbjct: 234 K----DLLEQMMAEMVGEFPDLHRTIVSERDVYLTYMLRQAA 271
>gi|398338218|ref|ZP_10522921.1| pheromone shutdown protein [Leptospira kirschneri serovar Bim str.
1051]
gi|421088098|ref|ZP_15548927.1| TraB family protein [Leptospira kirschneri str. 200802841]
gi|410003354|gb|EKO53799.1| TraB family protein [Leptospira kirschneri str. 200802841]
Length = 408
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 123/236 (52%), Gaps = 12/236 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G +V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 30 GKTNVTILGTAHISQKSIDEVQRIIRKEKPDTVCVELCNSRMRSLKDSEHWKKLDIFKVF 89
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A E K G K++ DR V T
Sbjct: 90 KERKMYLLLSSLILSAFQKKLGKGS----IRPGDEMRMAIHEGEKIGAKIVPIDREVSTT 145
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + +++++ LL + L F ED++ ++EM D+L + ++ K + +
Sbjct: 146 LKRAWWNIGIFNRLFLLSALLTSLFV---KEDISEEKIEEMKSEDVLKDLFSQLPKRYES 202
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
+ ++ ERD Y++ + A E V AVVG GHLQGI ++ ++ + L +P
Sbjct: 203 IKNVIIDERDSYLAQKIRDSAKEGKKVFAVVGAGHLQGILSHVQEEKDISKLDELP 258
>gi|303275990|ref|XP_003057289.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461641|gb|EEH58934.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 257
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 112/235 (47%), Gaps = 22/235 (9%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-----SMLTPQNLKVPTVGEM 198
+VYL+GTAHVSK+S EV +I ++P VF+ELC R SML P G +
Sbjct: 12 EVYLIGTAHVSKKSAEEVRDVIQAVRPDTVFVELCEKRAASIRRSMLQDDGASAPG-GGV 70
Query: 199 VDMWKKKHNTFGILYSWFLAKVASHLEIF---PGSEFRVAFEEAMKYGGKVILGDRPVQI 255
D K+ G + L + + PG EF+VA EEA K G K+++GDR ++
Sbjct: 71 EDKVKEFLRVLGCVLGAGLKSIYQAFRTYGLDPGLEFKVAIEEAEKIGAKLVMGDRDQEV 130
Query: 256 TLRRTWEKMPLWHKIKLLYSF-----------LFQAFFLPSAEDLNRMLKEMDDVDMLTL 304
T+RR E + + ++ ++S L + F D ++ M +
Sbjct: 131 TIRRLREALTMSDFLRAMFSGGTIPTDHMPPDLAERFSKIDWNDPQAAVEMMKTRRAVAE 190
Query: 305 VIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK 359
V + + FP + +V ERD+ M++ LL VAVVG H+ GI+ W+
Sbjct: 191 VTRHLRTDFPKVAVAMVDERDEMMTNGLLHKCP--GRTVAVVGMAHMDGIEARWR 243
>gi|47225784|emb|CAF98264.1| unnamed protein product [Tetraodon nigroviridis]
Length = 327
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 151/292 (51%), Gaps = 36/292 (12%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
+LP +V TC + +G +YLVGTAH S S +V I ++P VV +ELC RVS
Sbjct: 40 KLPETV---TCLTAPDGSL--LYLVGTAHFSDSSKNDVATTIRAVQPDVVVVELCQYRVS 94
Query: 184 MLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRV 234
ML + + +++ K K++ L L KV++H L + PG EFR
Sbjct: 95 MLKMDENTLLREAKDINLEKVQQAIKQNGVMSGLMQILLLKVSAHITEQLGMAPGGEFRE 154
Query: 235 AFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRML 293
AF+EA + K LGDRP+ +T +R + LW K +L + F + + S ED+ +
Sbjct: 155 AFKEAGRVPFCKFHLGDRPIPVTFKRAIAALSLWQKARLAWGLCFLSDPI-SKEDVEKCK 213
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLK----VATEHSS------VV 343
++ D+L + EM FP L +T+V ERD Y++ TL + V H+S VV
Sbjct: 214 QK----DLLEQTMSEMIGEFPALHQTIVAERDIYLTHTLRQATRCVEAPHNSQKVPAVVV 269
Query: 344 AVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAI 395
VVG GH+ GI+ WK+ + ++++M++ P ++ LG + GV +
Sbjct: 270 GVVGIGHVPGIEKNWKKHLDINEIMSVAPPS------RLSWVLGAVIKGVVV 315
>gi|311256828|ref|XP_003126826.1| PREDICTED: traB domain-containing protein-like [Sus scrofa]
Length = 377
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 149/297 (50%), Gaps = 36/297 (12%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P+ LPR+V L AE G+ VY+VGTAH S +S ++V
Sbjct: 38 SDVDAFNLLLEMKLKRRRERPD-LPRTVTELV----AEDGS-RVYVVGTAHFSDDSKKDV 91
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWF 216
I ++P VV +ELC RVSML + V + K +++ L
Sbjct: 92 VKTIREVQPDVVVVELCQYRVSMLKMDERTLLREAREVSLEKLQQAVRQNGVMSGLMQML 151
Query: 217 LAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIK 271
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W K+K
Sbjct: 152 LLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVK 211
Query: 272 LLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSST 331
L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y++
Sbjct: 212 LAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYM 266
Query: 332 LLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
L + A S VV VVG GH+ GI+ W + + ++MT+P P
Sbjct: 267 LRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWTTDLNIQEIMTVPPP 323
>gi|417410148|gb|JAA51551.1| Hypothetical protein, partial [Desmodus rotundus]
Length = 370
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 145/292 (49%), Gaps = 39/292 (13%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LPR+V L AE G+ VY+VGTAH S +S ++V I ++P VV +ELC RVSM
Sbjct: 53 LPRTVTELV----AEDGS-RVYVVGTAHFSDDSKKDVVKTIRAVQPDVVVVELCQYRVSM 107
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + + + K +++ L L KV++H L + PG EFR A
Sbjct: 108 LKMDERTLLREAKEISLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 167
Query: 236 FEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F EA K K LGDRP+ +T +R + W K+KL + F + + S +D+ R +
Sbjct: 168 FREASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVERCKQ 226
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE---------------H 339
+ D+L ++ EM FP L T+V ERD Y++ L + A
Sbjct: 227 K----DLLEQMMAEMIGEFPDLHRTIVSERDIYLTYMLRQAARRLELPRSSDAEPRKCVP 282
Query: 340 SSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVA 391
S VV VVG GH+ GI+ W + +H++M +P P S +S L V VA
Sbjct: 283 SVVVGVVGMGHVPGIEKNWTTDLNIHEIMAVPPP----SISGRVSRLAVKVA 330
>gi|413945909|gb|AFW78558.1| hypothetical protein ZEAMMB73_688318 [Zea mays]
Length = 213
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 6/80 (7%)
Query: 119 KVLPEELPRSVVILTCDSTAE------GGTCDVYLVGTAHVSKESCREVEAIIDFLKPQV 172
K LPEEL + VV L C+++AE GGTC VY+VGTAHVS+ESC +V+AII++LKPQ
Sbjct: 130 KELPEELAKGVVCLECETSAEAAVSGVGGTCRVYVVGTAHVSQESCDQVKAIINYLKPQA 189
Query: 173 VFLELCSSRVSMLTPQNLKV 192
VFLELC SRV++LTPQNL+V
Sbjct: 190 VFLELCMSRVAILTPQNLQV 209
>gi|380792651|gb|AFE68201.1| traB domain-containing protein, partial [Macaca mulatta]
Length = 277
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 128/249 (51%), Gaps = 29/249 (11%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 38 SDVDAFNLLLEMKLKRRRQQPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDV 91
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGIL 212
I ++P VV +ELC RVSML Q L + + + V +++ L
Sbjct: 92 VKTIREVQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKLQQAV----RQNGLMSGL 147
Query: 213 YSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLW 267
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W
Sbjct: 148 MQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFW 207
Query: 268 HKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQY 327
K++L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y
Sbjct: 208 QKVRLAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVY 262
Query: 328 MSSTLLKVA 336
++ L + A
Sbjct: 263 LTYMLRQAA 271
>gi|109094612|ref|XP_001111850.1| PREDICTED: traB domain-containing protein-like isoform 4 [Macaca
mulatta]
gi|109094618|ref|XP_001111956.1| PREDICTED: traB domain-containing protein-like isoform 7 [Macaca
mulatta]
Length = 375
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 128/249 (51%), Gaps = 29/249 (11%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 38 SDVDAFNLLLEMKLKRRRQQPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDV 91
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGIL 212
I ++P VV +ELC RVSML Q L + + + V +++ L
Sbjct: 92 VKTIREVQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKLQQAV----RQNGLMSGL 147
Query: 213 YSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLW 267
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W
Sbjct: 148 MQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFW 207
Query: 268 HKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQY 327
K++L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y
Sbjct: 208 QKVRLAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDIY 262
Query: 328 MSSTLLKVA 336
++ L + A
Sbjct: 263 LTYMLRQAA 271
>gi|384109148|ref|ZP_10010031.1| putative TraB pheromone shutdown family protein [Treponema sp. JC4]
gi|383869279|gb|EID84895.1| putative TraB pheromone shutdown family protein [Treponema sp. JC4]
Length = 394
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 124/227 (54%), Gaps = 19/227 (8%)
Query: 139 EGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEM 198
E G + LVGTAHVS +S EV I LKP V +EL R + QN + + ++
Sbjct: 9 ELGGRKITLVGTAHVSAQSIEEVTNTIKELKPDCVAVELDEKRADSI--QNDQRYSDLDI 66
Query: 199 VDMWKKKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQ 254
V + ++ F +L + LA ++ ++ + PG E A + A + G + DRPVQ
Sbjct: 67 VKVIRE-GKVFLVLANLMLASFQKRMGQNIGVKPGDEMLAAIKTAEEMGIATSMVDRPVQ 125
Query: 255 ITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN----RMLKEMDDVDMLTLVIQEMS 310
TLRR W K K+ LL S L AF S ED++ LK+ +++D + + E+S
Sbjct: 126 TTLRRAWAKNGFMGKMGLLASLLASAF---SKEDIDESEIEALKQKNEMDSM---MGELS 179
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNY 357
K P + E L+ ERD+Y++S + + ++ +++VAV+G GHL G++ +
Sbjct: 180 KEMPVIKEVLIDERDKYLASKIWE--SQGNNIVAVLGAGHLAGVEAH 224
>gi|281211823|gb|EFA85985.1| hypothetical protein PPL_01218 [Polysphondylium pallidum PN500]
Length = 694
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 95/158 (60%), Gaps = 5/158 (3%)
Query: 211 ILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKI 270
+L + + K + ++ PG+EF AF E+ K G K++LGDR V+ITL+R W + W KI
Sbjct: 494 VLMAEMIRKAGNQSKVGPGAEFITAFIESKKIGAKIVLGDRLVEITLQRVWNSLTRWEKI 553
Query: 271 KLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSS 330
K ++ +F + +D++ LK DD ++ L + E + FP++++T+V ERDQYM++
Sbjct: 554 KFVFCLCMASFSEVTQQDID-ALKNSDDRLVMEL-LDEFKEKFPSVVQTIVTERDQYMAA 611
Query: 331 TLLKVATEHSSVVAVVGKGHLQGIKNYWKQ-PVPVHDL 367
L + +VAVVGKGH+ GI W + +H+L
Sbjct: 612 RLRLCPGK--KIVAVVGKGHVNGIIREWNNYQINLHEL 647
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
ELP S +L T +G+ HV + S EV II +P+ VF+ELC SR
Sbjct: 228 ELPSSATVLHSPFTNS-------TMGSVHVHQSSSDEVSDIISKWRPETVFIELCRSRAG 280
Query: 184 ML 185
++
Sbjct: 281 LV 282
>gi|301763757|ref|XP_002917291.1| PREDICTED: LOW QUALITY PROTEIN: traB domain-containing protein-like
[Ailuropoda melanoleuca]
Length = 379
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 117/222 (52%), Gaps = 20/222 (9%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LPR+V L AE G+ VY+VGTAH S +S ++V I ++P VV +ELC RVSM
Sbjct: 62 LPRTVTELV----AEDGS-RVYVVGTAHFSDDSKKDVAKTIREVQPDVVVVELCQYRVSM 116
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + + + K +++ L L KV++H L + PG EFR A
Sbjct: 117 LKMDESTLLQEAKEISLEKLQQAVRQNGVMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 176
Query: 236 FEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F+EA K K LGDRP+ +T +R + W K+KL + F + + S +D+ R +
Sbjct: 177 FKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVERCKQ 235
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA 336
+ D+L ++ EM FP L T+V ERD Y++ L + A
Sbjct: 236 K----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYMLRQAA 273
>gi|157817646|ref|NP_001100258.1| traB domain-containing protein [Rattus norvegicus]
gi|149017528|gb|EDL76532.1| similar to RIKEN cDNA 5730502D15 gene (predicted) [Rattus
norvegicus]
Length = 376
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 133/261 (50%), Gaps = 31/261 (11%)
Query: 138 AEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGE 197
AE G+ VY+VGTAH S +S R+V I ++P VV +ELC RVSML + +
Sbjct: 68 AEDGS-RVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSMLKMDERTLLREAK 126
Query: 198 MVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVI 247
V + K K++ L L KV++H L + PG EFR AF+EA K K
Sbjct: 127 EVSLEKLQQAVKQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFH 186
Query: 248 LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQ 307
LGDRP+ +T +R + W K+KL + F + + S +D+ R ++ D+L ++
Sbjct: 187 LGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMA 241
Query: 308 EMSKAFPTLMETLVHERDQYMSSTLLKVATE---------------HSSVVAVVGKGHLQ 352
EM FP L T+V ERD Y++ L + A S VV VVG GH+
Sbjct: 242 EMIGEFPDLHRTIVSERDVYLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVP 301
Query: 353 GIKNYWKQPVPVHDLMTIPSP 373
GI+ W + + ++MT+P P
Sbjct: 302 GIEKNWSTDLNIQEIMTVPPP 322
>gi|345311995|ref|XP_001520057.2| PREDICTED: traB domain-containing protein-like, partial
[Ornithorhynchus anatinus]
Length = 347
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 116/222 (52%), Gaps = 20/222 (9%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP +V L T EG VY+VGTAH S +S R+V I ++P VV +ELC RVSM
Sbjct: 54 LPGTVTELV---TEEGSK--VYVVGTAHFSDDSKRDVVKTIQEVQPDVVVVELCQYRVSM 108
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + +++ K K++ L L KV++H L + PG EFR A
Sbjct: 109 LKMDEKTLLKEAKEINLEKLQQAIKQNGVMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 168
Query: 236 FEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F+EA K K LGDRP+ +T +R + W K+KL + F + + S +D+ R +
Sbjct: 169 FKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVERCKQ 227
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA 336
+ D+L ++ EM FP L T+V ERD Y++ L + A
Sbjct: 228 K----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYMLKQAA 265
>gi|221118632|ref|XP_002161113.1| PREDICTED: traB domain-containing protein-like [Hydra
magnipapillata]
Length = 467
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 116/227 (51%), Gaps = 25/227 (11%)
Query: 117 TKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLE 176
+K+ LPE + + V + GT +Y++GTAH SK S +V I L P +V +E
Sbjct: 122 SKESLPENVSKIV--------SSSGTI-IYIIGTAHFSKASQEDVAKTIQLLSPDIVMIE 172
Query: 177 LCSSRVSMLTPQNLKVPTVGEMVDMWKKKHNT-------FGILYSWFL---AKVASHLEI 226
LCSSR+ +L + + V + K K GI+ L A + L +
Sbjct: 173 LCSSRIGVLKLDEEALLEAAKDVSLSKLKMAIKDSGSVLSGIMQLLLLSMSAHITKQLGM 232
Query: 227 FPGSEFRVAFEEAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPS 285
PG EFRVA +A + G +++LGDRP+Q TL R + ++ KIKL + +F + +
Sbjct: 233 APGGEFRVATNQAKQIPGCRIVLGDRPIQATLGRAMASLSIFQKIKLGWHLIFSKGTI-T 291
Query: 286 AEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL 332
ED+ + ++ DM+ ++ EM+ FP L + V ERD YM+ L
Sbjct: 292 KEDVEKYKQK----DMIAEMLAEMTGDFPELSKVFVDERDLYMAHML 334
>gi|385800012|ref|YP_005836416.1| TraB family protein [Halanaerobium praevalens DSM 2228]
gi|309389376|gb|ADO77256.1| TraB family protein [Halanaerobium praevalens DSM 2228]
Length = 389
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 131/260 (50%), Gaps = 9/260 (3%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMW 202
++ L+ TAH+SK+S +V+ +I+ +P V +EL R S+ + +++
Sbjct: 15 EIILIPTAHISKKSAEQVKEVIETEEPDSVCVELDQERYDSIDNNDKWSEMNIFQVIKEK 74
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K ++ S F ++A L I G E R E A + G +++L DR +QIT +R W
Sbjct: 75 KSLLLLVNLIISSFQTRMAQKLGINAGQEMRQGIESAKELGAELVLADRNIQITFKRVWG 134
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
+ LW K+KL++ + F E + ++ + + L ++++EM K+FP + + L+
Sbjct: 135 GLGLWEKLKLIFQIISMLFV--DEEITEAEMDQLKNGNALNMMLEEMGKSFPGIKKHLLD 192
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKV 382
ERDQY+++ + + +VAV+G H+ G+K K+ DL I P K+
Sbjct: 193 ERDQYLANKIKNAPG--NKIVAVLGAAHVPGVK---KEIYKEQDLAAITKLMPKAKWGKI 247
Query: 383 LSSLGVAVAGVAIISGIYIN 402
S G+ + II +IN
Sbjct: 248 F-SWGIPAVILVIIISSFIN 266
>gi|354559769|ref|ZP_08979014.1| TraB family protein [Desulfitobacterium metallireducens DSM 15288]
gi|353540589|gb|EHC10063.1| TraB family protein [Desulfitobacterium metallireducens DSM 15288]
Length = 390
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 9/215 (4%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+GTAHVSK+S +V +I+ +P V +EL R L +N T ++ + K
Sbjct: 17 EIILIGTAHVSKQSAEQVREVIEAEQPDSVCIELDEPRYQSLMDENKWKET--DIFKVIK 74
Query: 204 KKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+K T + S F ++A L PG E + A + G ++L DR +QIT R
Sbjct: 75 EKKATLLLINLALSSFQKRMAKQLGTNPGQEMVEGIKSAQEVGADLVLADRDIQITFSRV 134
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W + W K+KLL + F S D L++M DML ++Q+ S FP L L
Sbjct: 135 WHNVGFWGKVKLLMEIIVSIFDDESISD--EELEKMKSQDMLNSMLQDFSVNFPKLKAPL 192
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
+ ER++Y++ + + + +VAV+G H+ GIK
Sbjct: 193 IDERNEYLAQKIKEAPG--NKIVAVLGAAHVPGIK 225
>gi|395819538|ref|XP_003783139.1| PREDICTED: traB domain-containing protein [Otolemur garnettii]
Length = 371
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 139/274 (50%), Gaps = 35/274 (12%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LPR+V L AE G+ VY+VGTAH S +S R+V I ++P VV +ELC RVSM
Sbjct: 54 LPRTVTQLV----AEDGS-QVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSM 108
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + + + K +++ L L KV++H L + PG EFR A
Sbjct: 109 LKMDESTLLREAKELSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 168
Query: 236 FEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F+EA K K LGDRP+ +T +R + W K++L + F + + S +D+ R +
Sbjct: 169 FKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVRLAWGLCFLSDPI-SKDDVERCKQ 227
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA---------------TEH 339
+ D+L ++ EM FP L T+V ERD Y++ L + A
Sbjct: 228 K----DLLEQMMAEMIGEFPDLHRTIVSERDIYLTYVLRQAARCLELPRASDAEPRKCVP 283
Query: 340 SSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
+ VV VVG GH+ GI+ W + + ++MT+P P
Sbjct: 284 AVVVGVVGMGHVPGIEKNWSADLNIQEIMTVPPP 317
>gi|387019341|gb|AFJ51788.1| traB domain-containing protein-like [Crotalus adamanteus]
Length = 374
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 142/279 (50%), Gaps = 34/279 (12%)
Query: 136 STAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTV 195
+T EG VY+VGTAH S S ++V I ++P VV +ELC RVSML +
Sbjct: 65 ATEEGSK--VYVVGTAHFSDSSKKDVVKTIQEVQPDVVVVELCQYRVSMLKMDERTLLKE 122
Query: 196 GEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG-GK 245
+ +++ K K++ L L KV++H L + PG EFR AF+EA K K
Sbjct: 123 AKEINLEKLQQAIKQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCK 182
Query: 246 VILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLV 305
LGDRP+ +T +R + LW KIKL + F + + S +D+ + ++ D+L +
Sbjct: 183 FHLGDRPIPVTFKRAIAALSLWQKIKLAWGLCFLSDPI-SKDDVEKCKQK----DLLEQM 237
Query: 306 IQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSV----------------VAVVGKG 349
+ EM FP L T+V ERD Y+ + +LK A + + + V VVG G
Sbjct: 238 MAEMIGEFPDLHRTIVSERDIYL-TYMLKQAAKRTELPRASEAEPRRCVPSVVVGVVGMG 296
Query: 350 HLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGV 388
H+ GI+ W + + ++M++P P + LK ++ V
Sbjct: 297 HVPGIEKNWNTDLNIQEIMSVPPPSTSSKILKFVTKATV 335
>gi|225455471|ref|XP_002274961.1| PREDICTED: traB domain-containing protein-like [Vitis vinifera]
Length = 385
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 123/239 (51%), Gaps = 31/239 (12%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR--VSMLTP-------------Q 188
+++L+GT H+S S +VE +++ + P V +ELC SR +S++ Q
Sbjct: 92 EIWLLGTTHISSFSAADVERVVEVVNPDNVVVELCRSRQVLSLVNGAGIMYTSNHGELNQ 151
Query: 189 NLK-----------VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFE 237
L+ +G +++ + +L + F +K++S + G EFR A +
Sbjct: 152 QLRSSMFSLSGTGFFGAIGRSINLGGQTALALRLLLAVFSSKISSDVNRPFGDEFRAARK 211
Query: 238 EAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMD 297
+ K G +++LGDRP++ITL R W + K+ L+ S + + S+E +KE+
Sbjct: 212 ASEKVGAQIVLGDRPIEITLERAWNSLEWNEKLSLVISVIRG---ITSSELSTNEMKELS 268
Query: 298 DVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL--LKVATEHSSVVAVVGKGHLQGI 354
D + ++S A+P+L++ L+HERD Y++ +L K VV V+GKGH+ G+
Sbjct: 269 TDDSTFQLYDQLSVAYPSLLQPLIHERDTYLAWSLKRSKAVNGGKRVVGVIGKGHMNGV 327
>gi|224531744|ref|ZP_03672376.1| pheromone shutdown protein [Borrelia valaisiana VS116]
gi|224511209|gb|EEF81615.1| pheromone shutdown protein [Borrelia valaisiana VS116]
Length = 404
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 132/248 (53%), Gaps = 21/248 (8%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML--TPQNLKVPTVGEMVDMW 202
+Y++GTAHVSK+S + +I+ LKP + +EL +R + T +N K + +D
Sbjct: 27 IYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTDENEKWRNLD--IDKA 84
Query: 203 KKKHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K+ F I+ S F K+A I PG E + A +A + +IL DR ++ TL+
Sbjct: 85 LKQGKAFFLIINIILSNFQKKLAKEQGINPGEEMKTAILKAKTHNIPLILADRKIETTLK 144
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R W +P++ K K++ S F L + ++++ + D L+ +++E+SK P + +
Sbjct: 145 RAWISIPIFEKAKIISSL----FSLTDTKITKDEIEKLKEQDALSKIMEELSKEIPKVKK 200
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ------PVPVHDLMTIPS 372
L+ ERD+++++ +L+ +++A+VG GH+ GI K+ + V +L IP
Sbjct: 201 ALIDERDEFITNKILE---GKGTILAIVGAGHVNGIMKTLKEISQNKKIINVEELDRIPK 257
Query: 373 PKPAVSAL 380
++S +
Sbjct: 258 KHFSLSKM 265
>gi|418743376|ref|ZP_13299739.1| TraB family protein [Leptospira santarosai str. CBC379]
gi|418753379|ref|ZP_13309628.1| TraB family protein [Leptospira santarosai str. MOR084]
gi|409966294|gb|EKO34142.1| TraB family protein [Leptospira santarosai str. MOR084]
gi|410795691|gb|EKR93584.1| TraB family protein [Leptospira santarosai str. CBC379]
Length = 408
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 125/240 (52%), Gaps = 12/240 (5%)
Query: 137 TAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKV 192
T + G V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L +
Sbjct: 26 TLKLGKTIVTILGTAHISQKSIDEVQRIIRKEKPDTVCVELCNSRMRSLKDNEHWKKLDI 85
Query: 193 PTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRP 252
V + M+ + + L K + I PG E R+A E + G K++ DR
Sbjct: 86 FKVFKERKMYLLLSSLILSAFQKKLGKDS----IRPGDEMRMAIGEGERIGAKIVPIDRE 141
Query: 253 VQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSK 311
+ TL+R W + +++++ LL + L F ED++ ++EM D+L + ++ K
Sbjct: 142 ISTTLKRAWWNIGIFNRMILLSALLTSLFV---KEDVSEEKIEEMKSEDVLKDLFSQLPK 198
Query: 312 AFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
+ ++ ++ ERD Y++ + + E + AVVG GHLQGI N+ ++ + DL +P
Sbjct: 199 RYESIKNVIIDERDFYLAQKIRDASKEGKKIFAVVGAGHLQGIMNHIQEERDISDLDHLP 258
>gi|432864263|ref|XP_004070254.1| PREDICTED: traB domain-containing protein-like [Oryzias latipes]
Length = 363
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 117/219 (53%), Gaps = 20/219 (9%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
ELP +V LT A G+ +YLVGTAH S+ S ++V I ++P VV +ELC RVS
Sbjct: 52 ELPETVTRLT----APDGSV-LYLVGTAHFSESSKKDVATTIRAVQPDVVVVELCQYRVS 106
Query: 184 MLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRV 234
ML + + +++ K K++ L L KV++H L + PG EFR
Sbjct: 107 MLRMDESTLLREAKDINLEKVQQAIKQNGLMSGLMQILLLKVSAHITEQLGMAPGGEFRE 166
Query: 235 AFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRML 293
AF+EA + K LGDRP+ +T +R + LW K +L + F + + S ED+ +
Sbjct: 167 AFKEAGQVPFCKFHLGDRPIPVTFKRAIAALSLWQKARLAWGLCFLSDPI-SKEDVEKCK 225
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL 332
++ D+L + EM FP L +T+V ERD Y++ +L
Sbjct: 226 QK----DLLEQTMSEMIGEFPALHQTIVAERDMYLTHSL 260
>gi|449124833|ref|ZP_21761151.1| TraB family protein [Treponema denticola OTK]
gi|448941375|gb|EMB22277.1| TraB family protein [Treponema denticola OTK]
Length = 396
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 128/256 (50%), Gaps = 36/256 (14%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+GTAHVSKES ++VE+ I P V +EL R LT + D W+
Sbjct: 18 EIILLGTAHVSKESIKDVESTIREENPDCVCVELDEVRYKSLTSK-----------DTWQ 66
Query: 204 --------KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDR 251
++ F +L + LA K+ S L + PG E + A E + + K + DR
Sbjct: 67 QINISQVLREGKGFLLLANLVLASFQKKLGSDLGVKPGDEMKAAIEVSQELNIKTEMVDR 126
Query: 252 PVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMS 310
P+ TL+R W K W + KLL + L AF S E L ++++ + + ++QEM+
Sbjct: 127 PIHTTLKRAWAKNRGWGRSKLLATLLSAAF---SNEKLEEAEIEKLKNQSAMDNMMQEMA 183
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ------PVPV 364
+ P + L+ ERD+Y++S + + + +VAV+G GHL G + + K+ V
Sbjct: 184 EYLPNIKGVLIDERDRYLASKIWE--SSGKKIVAVLGAGHLPGTERFIKELEAGTKTTDV 241
Query: 365 HDLMTIPSPKPAVSAL 380
D+ IP PK VS +
Sbjct: 242 SDIEVIP-PKSTVSKI 256
>gi|421110702|ref|ZP_15571194.1| TraB family protein [Leptospira santarosai str. JET]
gi|422003333|ref|ZP_16350564.1| pheromone shutdown protein [Leptospira santarosai serovar Shermani
str. LT 821]
gi|410803978|gb|EKS10104.1| TraB family protein [Leptospira santarosai str. JET]
gi|417258055|gb|EKT87449.1| pheromone shutdown protein [Leptospira santarosai serovar Shermani
str. LT 821]
Length = 408
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 123/236 (52%), Gaps = 12/236 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 30 GKTIVTILGTAHISQKSIDEVQRIIRKEKPDTVCVELCNSRMRSLKDNEHWKKLDIFKVF 89
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A E + G K++ DR + T
Sbjct: 90 KERKMYLLLSSLILSAFQKKLGKDS----IRPGDEMRMAIGEGERIGAKIVPIDREISTT 145
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + +++++ LL + L F ED++ ++EM D+L + ++ K + +
Sbjct: 146 LKRAWWNIGIFNRMILLSALLTSLFV---KEDVSEEKIEEMKSEDVLKDLFSQLPKRYES 202
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
+ ++ ERD Y++ + + E + AVVG GHLQGI N+ ++ + DL +P
Sbjct: 203 IKNVIIDERDFYLAQKIRDASKEGKKIFAVVGAGHLQGIMNHIQEERDISDLDHLP 258
>gi|410451971|ref|ZP_11305970.1| TraB family protein [Leptospira sp. Fiocruz LV3954]
gi|410014190|gb|EKO76323.1| TraB family protein [Leptospira sp. Fiocruz LV3954]
Length = 408
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 123/236 (52%), Gaps = 12/236 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 30 GKTIVTILGTAHISQKSIDEVQRIIRKEKPDTVCVELCNSRMRSLKDNEHWKKLDIFKVF 89
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A E + G K++ DR + T
Sbjct: 90 KERKMYLLLSSLILSAFQKKLGKDS----IRPGDEMRMAIGEGERIGAKIVPIDREISTT 145
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + +++++ LL + L F ED++ ++EM D+L + ++ K + +
Sbjct: 146 LKRAWWNIGIFNRMILLSALLTSLFV---KEDVSEEKIEEMKSEDVLKDLFSQLPKRYES 202
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
+ ++ ERD Y++ + + E + AVVG GHLQGI N+ ++ + DL +P
Sbjct: 203 IKNVIIDERDFYLAQKIRDASKEGKKIFAVVGAGHLQGIMNHIQEERDISDLDHLP 258
>gi|334347693|ref|XP_001363509.2| PREDICTED: traB domain-containing protein-like [Monodelphis
domestica]
Length = 463
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 134/258 (51%), Gaps = 24/258 (9%)
Query: 92 SLG---DEVRDESSDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLV 148
SLG ++ ++E++D D + + + ++ P LP +V L T EG VY+V
Sbjct: 111 SLGMQEEQPQEEATDVDAFKILLEMKMKKRQKQPS-LPGTVTELV---TEEGSK--VYVV 164
Query: 149 GTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK----- 203
GTAH S +S R+V I ++P VV +ELC RVSML + + +++ K
Sbjct: 165 GTAHFSDDSKRDVVKTIQEVQPDVVVVELCQYRVSMLKMDEKTLLKEAKEINLEKLQQAV 224
Query: 204 KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLR 258
K++ L L KV++H L + PG EFR AF+EA K K LGDRP+ +T +
Sbjct: 225 KQNGVMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFK 284
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R + W K+KL + F + + S +D+ + ++ D+L ++ EM FP L
Sbjct: 285 RAIAALSFWQKVKLAWGLCFLSDPI-SKDDVEKCKQK----DLLEQMMAEMIGEFPDLHR 339
Query: 319 TLVHERDQYMSSTLLKVA 336
T+V ERD Y++ L + A
Sbjct: 340 TIVSERDIYLTYMLRQAA 357
>gi|422340930|ref|ZP_16421871.1| TraB family protein [Treponema denticola F0402]
gi|325475334|gb|EGC78519.1| TraB family protein [Treponema denticola F0402]
Length = 396
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 128/256 (50%), Gaps = 36/256 (14%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+GTAHVSKES ++VE+ I P V +EL R LT + D W+
Sbjct: 18 EIILLGTAHVSKESIKDVESTIREENPDCVCVELDEVRYKSLTSK-----------DTWQ 66
Query: 204 --------KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDR 251
++ F +L + LA K+ S L + PG E + A E + + K + DR
Sbjct: 67 QINISQVLREGKGFLLLANLVLASFQKKLGSDLGVKPGDEMKAAIEVSQELNIKTEMVDR 126
Query: 252 PVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMS 310
P+ TL+R W K W + KLL + L AF S E L ++++ + + ++QEM+
Sbjct: 127 PIHTTLKRAWAKNRGWGRSKLLATLLSAAF---SNEKLGEAEIEKLKNQSAMDNMMQEMA 183
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ------PVPV 364
+ P + L+ ERD+Y++S + + + +VAV+G GHL G + + K+ V
Sbjct: 184 EYLPNIKGVLIDERDRYLASKIWE--SSGKKIVAVLGAGHLPGTERFIKELEAGTKTTDV 241
Query: 365 HDLMTIPSPKPAVSAL 380
D+ IP PK VS +
Sbjct: 242 SDIEVIP-PKSTVSKI 256
>gi|257456244|ref|ZP_05621441.1| TraB family protein [Treponema vincentii ATCC 35580]
gi|257446330|gb|EEV21376.1| TraB family protein [Treponema vincentii ATCC 35580]
Length = 391
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 127/246 (51%), Gaps = 20/246 (8%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQ-NLKVPTVGEMVDMW 202
++ L+GTAH+SKES +VE I +P V +EL R LT + + + E++
Sbjct: 14 EIILLGTAHISKESIDDVEQCIHDEQPDCVCVELDEQRYKALTDEKQWQELDIIEVLKSG 73
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K ++ + F ++ + + + PG E + A A + K L DRP+ ITL+R W
Sbjct: 74 KGFLLLANLVLAAFQKRIGADVGVKPGDEMKAAITAAKELSIKTELVDRPIHITLKRAWA 133
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLN----RMLKEMDDVDMLTLVIQEMSKAFPTLME 318
K LW K KLL + L AF S E L+ LK+ ++D + + EM++ P + E
Sbjct: 134 KNNLWGKSKLLATLLSSAF---STEKLSADEIEALKDKSEMDSM---MAEMAEYLPQVKE 187
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ------PVPVHDLMTIPS 372
L+ ERD+Y+++ + A + + VAV+G GHL+G Y ++ P V D+ +P
Sbjct: 188 ALIDERDRYLATKIWNAAGKKT--VAVLGAGHLEGTAAYLEKLQSGTAPNDVSDIADVP- 244
Query: 373 PKPAVS 378
PK +
Sbjct: 245 PKSGFA 250
>gi|42525545|ref|NP_970643.1| TraB [Treponema denticola ATCC 35405]
gi|449110729|ref|ZP_21747329.1| TraB family protein [Treponema denticola ATCC 33521]
gi|449114458|ref|ZP_21750936.1| TraB family protein [Treponema denticola ATCC 35404]
gi|41815556|gb|AAS10524.1| TraB family protein [Treponema denticola ATCC 35405]
gi|448956610|gb|EMB37370.1| TraB family protein [Treponema denticola ATCC 35404]
gi|448960103|gb|EMB40820.1| TraB family protein [Treponema denticola ATCC 33521]
Length = 396
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 128/256 (50%), Gaps = 36/256 (14%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+GTAHVSKES ++VE+ I P V +EL R LT + D W+
Sbjct: 18 EIILLGTAHVSKESIKDVESTIREENPDCVCVELDEVRYKSLTSK-----------DTWQ 66
Query: 204 --------KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDR 251
++ F +L + LA K+ S L + PG E + A E + + K + DR
Sbjct: 67 QINISQVLREGKGFLLLANLVLASFQKKLGSDLGVKPGDEMKAAIEVSQELNIKTEMVDR 126
Query: 252 PVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMS 310
P+ TL+R W K W + KLL + L AF S E L ++++ + + ++QEM+
Sbjct: 127 PIHTTLKRAWAKNRGWGRSKLLATLLSAAF---SNEKLEEAEIEKLKNQSAMDNMMQEMA 183
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ------PVPV 364
+ P + L+ ERD+Y++S + + + +VAV+G GHL G + + K+ V
Sbjct: 184 EYLPNIKGVLIDERDRYLASKIWE--SSGKKIVAVLGAGHLPGTERFIKELEAGTKTTDV 241
Query: 365 HDLMTIPSPKPAVSAL 380
D+ IP PK VS +
Sbjct: 242 SDIEVIP-PKSTVSKI 256
>gi|330842088|ref|XP_003293017.1| hypothetical protein DICPUDRAFT_99532 [Dictyostelium purpureum]
gi|325076696|gb|EGC30462.1| hypothetical protein DICPUDRAFT_99532 [Dictyostelium purpureum]
Length = 640
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 122/219 (55%), Gaps = 13/219 (5%)
Query: 194 TVGEMVDMWKKKHNTFGILY---SWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGD 250
T+ +M+++ K H G+L+ + + + PGSEF AF EA K G V+LGD
Sbjct: 423 TLKDMINI-VKTHGLSGLLHILMAELIRSAGKKSNVNPGSEFITAFVEAKKVGSLVVLGD 481
Query: 251 RPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMS 310
R ++ITL+R W + W K+K ++ +F + ED++++ D +++ ++ E
Sbjct: 482 RLIEITLQRVWNSLSTWEKLKFVFYLFMASFSEVTNEDIDKINNNSD--ELIDELLNEFR 539
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ-PVPVHDLMT 369
FP++++T+V ERDQYM++ L + +VAVVGKGH++G+ W + +++L +
Sbjct: 540 DRFPSVVQTIVTERDQYMAARLRMCPGK--KIVAVVGKGHIKGMVKEWTNYNINLNELES 597
Query: 370 I-PSPKPAV-SALKVLSSLG--VAVAGVAIISGIYINCK 404
+ PS K + S+ V++ + + V I S ++ N K
Sbjct: 598 VQPSNKKSSDSSWSVVTKWASLILIPIVGITSFLFFNKK 636
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
ELP S VIL T + LVG+ H+ K S +V +I KP VF+ELC SR
Sbjct: 77 ELPSSAVILHSPITQ----STIILVGSVHIYKGSSDDVSNVIKNWKPDTVFIELCQSRAG 132
Query: 184 -MLTPQNLKV-PTVGEMVDMWKKKH 206
MLTP + ++ + +++D K+H
Sbjct: 133 LMLTPSHSRIRASSKKILDNRSKQH 157
>gi|359683677|ref|ZP_09253678.1| pheromone shutdown protein [Leptospira santarosai str. 2000030832]
Length = 416
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 123/236 (52%), Gaps = 12/236 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 38 GKTIVTILGTAHISQKSIDEVQRIIRKEKPDTVCVELCNSRMRSLKDSEHWKKLDIFKVF 97
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A E + G K++ DR + T
Sbjct: 98 KERKMYLLLSSLILSAFQKKLGKDS----IRPGDEMRMAIGEGERIGAKIVPIDREISTT 153
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + +++++ LL + L F ED++ ++EM D+L + ++ K + +
Sbjct: 154 LKRAWWNIGIFNRMILLSALLTSLFV---KEDVSEEKIEEMKSEDVLKDLFSQLPKRYES 210
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
+ ++ ERD Y++ + + E + AVVG GHLQGI N+ ++ + DL +P
Sbjct: 211 IKNVIIDERDFYLAQKIRDASKEGKKIFAVVGAGHLQGIMNHIQEERDISDLDHLP 266
>gi|449129831|ref|ZP_21766060.1| TraB family protein [Treponema denticola SP37]
gi|448945321|gb|EMB26195.1| TraB family protein [Treponema denticola SP37]
Length = 396
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 129/256 (50%), Gaps = 36/256 (14%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+GTAHVSKES ++VE+II P V +EL R LT + D W+
Sbjct: 18 EIILLGTAHVSKESIKDVESIIREENPDCVCVELDDVRYKSLTSK-----------DAWQ 66
Query: 204 --------KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDR 251
++ F +L + LA K+ S L + PG E + A E + + K + DR
Sbjct: 67 QINISQVLREGKGFLLLANLVLASFQKKLGSDLGVKPGDEMKAAIEVSQELNIKTEMVDR 126
Query: 252 PVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMS 310
P+ TL+R W K W + KLL + L AF S+E L ++++ + + ++QEM+
Sbjct: 127 PIHTTLKRAWAKNRGWGRSKLLATLLSAAF---SSEKLEEDEIEKLKNQSAMDNMMQEMA 183
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ------PVPV 364
+ P + L+ ERD+Y++S + + + +VAV+G GHL G + + K+ V
Sbjct: 184 EYLPNIKGVLIDERDRYLASKIWE--SSGKKIVAVLGAGHLPGTERFIKELEAGTKTTDV 241
Query: 365 HDLMTIPSPKPAVSAL 380
D+ IP PK S +
Sbjct: 242 SDIEIIP-PKSTGSKI 256
>gi|408382644|ref|ZP_11180187.1| TraB family protein [Methanobacterium formicicum DSM 3637]
gi|407814720|gb|EKF85344.1| TraB family protein [Methanobacterium formicicum DSM 3637]
Length = 385
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 132/249 (53%), Gaps = 18/249 (7%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ ++GTAHVS++S EV+ I +P +V +EL ++R L + V E+
Sbjct: 5 NLTIIGTAHVSEKSVEEVKNTIIECEPDIVAVELDAARYQNLLNEKNGVQEDKEIKIREI 64
Query: 204 KKHNTFGILY-----SWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K+N F + S+F K+ + + PGSE A E A + G K+ L DR +QITL+
Sbjct: 65 LKNNNFTMFLVSGFLSYFQKKIGEEVGVKPGSEMMAAAEAATEAGAKIALIDRDIQITLK 124
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSA-EDLNRMLKEMDDVDMLTLVIQEMSKAFPTLM 317
R +M W K K +YS + F A ED+ +K+ D ++ + QEMS P
Sbjct: 125 RALNRMSFWEKAKFIYSIIASFFSKDEAIEDIED-IKQGDALEEVMGYFQEMS---PRAY 180
Query: 318 ETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPV---PVHDLMTIPSPK 374
E LV ERD YM+ LL + +VVAVVG GH +GI+ + P P++ L+ + P+
Sbjct: 181 EVLVAERDAYMAQRLLDL---EGNVVAVVGAGHKKGIQKNMENPQDIPPLYQLVELKEPR 237
Query: 375 PAVSALKVL 383
+SA K++
Sbjct: 238 --ISASKII 244
>gi|333993917|ref|YP_004526530.1| TraB family protein [Treponema azotonutricium ZAS-9]
gi|333734366|gb|AEF80315.1| TraB family protein [Treponema azotonutricium ZAS-9]
Length = 399
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 124/256 (48%), Gaps = 36/256 (14%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVD 200
G ++ L+GTAHVS+ES EV I P V +EL + R + ++ QN D
Sbjct: 11 GDREIILIGTAHVSRESIDEVTRTIREESPGQVCVELDAGRYASIS-QN----------D 59
Query: 201 MWKK--------KHNTF----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVIL 248
W+K + F ++ S F ++ L + PG E + A E A + G L
Sbjct: 60 SWEKLNIAKVFKEGKGFLLMANLVLSGFQRRMGDELGVKPGEEMKAALETANELGIPHGL 119
Query: 249 GDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQE 308
DR +QITLRR W + LW K KLL S + AF + ++ + + + L ++ E
Sbjct: 120 CDREIQITLRRAWARCGLWSKCKLLASLISSAFTTEKMSE--EEIENLKNHNELEGMMDE 177
Query: 309 MSKAFPTLMETLVHERDQYMSSTLLKVATEHSS-----VVAVVGKGHLQGIKNYW----- 358
+S P + ETL+ ERD+Y+++ + E + +AVVG GH++GIK++
Sbjct: 178 LSSYLPKVKETLIDERDRYLAAKIWSSGIEAKTEKGLKQIAVVGAGHIKGIKSHLEKIFA 237
Query: 359 -KQPVPVHDLMTIPSP 373
++ V L IP P
Sbjct: 238 NEESADVSALEIIPPP 253
>gi|449117030|ref|ZP_21753474.1| TraB family protein [Treponema denticola H-22]
gi|448952294|gb|EMB33098.1| TraB family protein [Treponema denticola H-22]
Length = 396
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 128/256 (50%), Gaps = 36/256 (14%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+GTAHVSKES ++VE+ I P V +EL R LT + D W+
Sbjct: 18 EIILLGTAHVSKESIKDVESTIREENPDCVCVELDEVRYKSLTSK-----------DTWQ 66
Query: 204 --------KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDR 251
++ F +L + LA K+ S L + PG E + A E + + K + DR
Sbjct: 67 QINISQVLREGKGFLLLANLVLASFQKKLGSDLGVKPGDEMKAAIEVSQELNIKTEMVDR 126
Query: 252 PVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMS 310
P+ TL+R W K W + KLL + L AF S E L ++++ + + ++QEM+
Sbjct: 127 PIHTTLKRAWAKNRGWGRSKLLATLLSAAF---SNEKLEEAEIEKLKNQSAMDNMMQEMA 183
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ------PVPV 364
+ P + L+ ERD+Y++S + + + +VAV+G GHL G + + K+ V
Sbjct: 184 EYLPNIKGVLIDERDRYLASKIWE--SSGKKIVAVLGAGHLPGTERFIKELEAGTKTTDV 241
Query: 365 HDLMTIPSPKPAVSAL 380
D+ IP PK VS +
Sbjct: 242 SDIEVIP-PKSTVSKI 256
>gi|258405871|ref|YP_003198613.1| TraB family protein [Desulfohalobium retbaense DSM 5692]
gi|257798098|gb|ACV69035.1| TraB family protein [Desulfohalobium retbaense DSM 5692]
Length = 392
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 111/226 (49%), Gaps = 29/226 (12%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
+VYL+GTAHVS S ++V+ + L P + +ELC SR + Q D WK
Sbjct: 21 EVYLLGTAHVSPSSVQDVQDSVAALSPDTICIELCPSRYQAMRNQ-----------DAWK 69
Query: 204 KKHNT------------FGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDR 251
K +L + F K+ L + PG+E +A G ++L DR
Sbjct: 70 KMDILRVLKERKAVLLLAQLLMTAFYRKLGEQLGVQPGAEMLEGARQADATGAHLVLADR 129
Query: 252 PVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMS 310
VQITLRR W + W KIK+ + + L +A+ ++ ++ + + D L V++
Sbjct: 130 DVQITLRRVWGYLSWWQKIKMAFQIMVS---LLAADGVDAEQVESLKEQDQLEAVMESFG 186
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKN 356
K+ P + + L+ ERD Y++ + + + ++AVVG GH+ GI+
Sbjct: 187 KSLPEVKKRLIDERDIYLAEKIRRAPGQ--KILAVVGAGHVAGIRE 230
>gi|348519328|ref|XP_003447183.1| PREDICTED: traB domain-containing protein-like [Oreochromis
niloticus]
Length = 359
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 116/219 (52%), Gaps = 20/219 (9%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
ELP +V LT A G+ +YLVGTAH S S ++V I ++P VV +ELC RVS
Sbjct: 48 ELPETVSCLT----APDGSI-LYLVGTAHFSDSSKKDVATTIRAVQPDVVVVELCQYRVS 102
Query: 184 MLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRV 234
ML + + +++ K K++ L L KV++H L + PG EFR
Sbjct: 103 MLKMDENTLLKEAKDINLDKVQQAIKQNGLMSGLMQILLLKVSAHITEQLGMAPGGEFRE 162
Query: 235 AFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRML 293
AF+EA + K LGDRP+ +T +R + LW K +L + F + + S ED+ +
Sbjct: 163 AFKEAGRVPFCKFHLGDRPIPVTFKRAIAALSLWQKARLAWGLCFLSDPI-SKEDVEKCK 221
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL 332
++ D+L + EM FP L +T+V ERD Y++ TL
Sbjct: 222 QK----DLLEQTMSEMIGEFPALHKTIVAERDIYLTHTL 256
>gi|281339509|gb|EFB15093.1| hypothetical protein PANDA_005505 [Ailuropoda melanoleuca]
Length = 339
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 117/222 (52%), Gaps = 20/222 (9%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LPR+V L AE G+ VY+VGTAH S +S ++V I ++P VV +ELC RVSM
Sbjct: 23 LPRTVTELV----AEDGS-RVYVVGTAHFSDDSKKDVAKTIREVQPDVVVVELCQYRVSM 77
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + + + K +++ L L KV++H L + PG EFR A
Sbjct: 78 LKMDESTLLQEAKEISLEKLQQAVRQNGVMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 137
Query: 236 FEEAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F+EA K K LGDRP+ +T +R + W K+KL + F + + S +D+ R +
Sbjct: 138 FKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVERCKQ 196
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA 336
+ D+L ++ EM FP L T+V ERD Y++ L + A
Sbjct: 197 K----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYMLRQAA 234
>gi|410908205|ref|XP_003967581.1| PREDICTED: traB domain-containing protein-like [Takifugu rubripes]
Length = 359
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 150/292 (51%), Gaps = 36/292 (12%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
+LP +V TC + +G +YLVGTAH S S +V I ++P VV +ELC RVS
Sbjct: 48 KLPETV---TCLAAPDGSL--LYLVGTAHFSDSSKNDVATTIRAVQPDVVVVELCQYRVS 102
Query: 184 MLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRV 234
ML + + +++ K K++ L L KV++H L + PG EFR
Sbjct: 103 MLKMDENTLLKEAKDINLEKVQQAIKQNGVMSGLMQILLLKVSAHITEQLGMAPGGEFRE 162
Query: 235 AFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRML 293
AF+EA K LGDRP+ +T +R + LW K +L + F + + S ED+ +
Sbjct: 163 AFKEAGHVPFCKFHLGDRPIPVTFKRAIAALSLWQKARLAWGLCFLSDPI-SKEDVEKCK 221
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLK----VATEHSS------VV 343
++ D+L + EM FP L +T+V ERD Y++ TL + V H+S VV
Sbjct: 222 QK----DLLEQTMSEMIGEFPALHQTIVAERDIYLTHTLRQATRCVEAPHNSQKVPAVVV 277
Query: 344 AVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAI 395
VVG GH+ GI+ W++ + ++++M++ P ++ LG + GV +
Sbjct: 278 GVVGIGHVPGIEKNWEKHLDINEIMSVAPPS------RLSWVLGTVIKGVMV 323
>gi|320538291|ref|ZP_08038176.1| TraB family protein [Treponema phagedenis F0421]
gi|320144867|gb|EFW36598.1| TraB family protein [Treponema phagedenis F0421]
Length = 392
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 118/226 (52%), Gaps = 27/226 (11%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVGEMV 199
++ L+GTAH+SKES EV+ ++ KP V +EL R LT Q L + V
Sbjct: 14 EIILLGTAHISKESITEVQNLLKEEKPDCVCVELDQDRYKSLTDEKKWQELDITKV---- 69
Query: 200 DMWKKKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQI 255
K+ F +L + LA K+ + L + PG E + A + A + V L DRP+ +
Sbjct: 70 ---LKEGKGFLLLTNLILASFQKKMGAELGVKPGDEMKAAIKTAEEINASVELVDRPIHL 126
Query: 256 TLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN----RMLKEMDDVDMLTLVIQEMSK 311
TL+R W K + K KLL + L AF S E L LKE +D + + E+++
Sbjct: 127 TLKRAWGKNGFFGKAKLLATLLASAF---SDEKLTEEEIEALKEKSAMDSM---MNEVAE 180
Query: 312 AFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNY 357
PT+ E L+ ERD+Y++S + + T+ ++AV+G GHL G + Y
Sbjct: 181 YMPTIKEVLIDERDRYLASKIWE--TKSKKIIAVLGAGHLPGTETY 224
>gi|355725841|gb|AES08681.1| TraB domain containing [Mustela putorius furo]
Length = 279
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 117/222 (52%), Gaps = 20/222 (9%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LPR+V L AE G+ VY+VGTAH S +S ++V I ++P VV +ELC RVSM
Sbjct: 22 LPRTVTELV----AEDGS-RVYVVGTAHFSDDSRKDVVKTIREVQPDVVVVELCQYRVSM 76
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + + + K +++ L L KV++H L + PG EFR A
Sbjct: 77 LKMDEGALLREAKEISLEKLQQAVRQNGVMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 136
Query: 236 FEEAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F+EA K K LGDRP+ +T +R + W K+KL + F + + S +D+ R +
Sbjct: 137 FKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVERCKR 195
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA 336
+ D+L ++ EM FP L T+V ERD Y++ L + A
Sbjct: 196 K----DLLEQMMAEMVGEFPDLHRTIVSERDVYLTYMLRQAA 233
>gi|187608551|ref|NP_001120465.1| TraB domain containing [Xenopus (Silurana) tropicalis]
gi|170284886|gb|AAI61290.1| LOC100145566 protein [Xenopus (Silurana) tropicalis]
Length = 367
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 140/287 (48%), Gaps = 35/287 (12%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP +V LT T EG VY+VGTAH S S ++V I ++P VV +ELC R+SM
Sbjct: 52 LPDTVTELT---TEEGSK--VYIVGTAHFSDSSKQDVVKTIQEVQPDVVVVELCQYRISM 106
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + +++ K K++ L L KV++H L + PG EFR A
Sbjct: 107 LKMDEETLLKEAKEINLEKLHQAIKQNGVMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 166
Query: 236 FEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F EA K K LGDRP+ +T +R + +W KIKL + + P +ED K
Sbjct: 167 FREASKVPFCKFHLGDRPIPVTFKRAIAALSVWQKIKLAWGLC--SLSDPISEDDVEKCK 224
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEH--------------- 339
+ D+L ++ EM FP L T+V ERD Y++ L + A
Sbjct: 225 QK---DLLEQMMAEMIGEFPDLHRTIVSERDIYLTYMLKQAARRTELPRASETEPRKSIP 281
Query: 340 SSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSL 386
S VV VVG GH+ GI+ W + + + ++M++P P A+ + L
Sbjct: 282 SVVVGVVGMGHVPGIERNWDRELNIQEIMSVPPPSTLSKAVAFAAKL 328
>gi|395537718|ref|XP_003770840.1| PREDICTED: traB domain-containing protein [Sarcophilus harrisii]
Length = 374
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 138/274 (50%), Gaps = 35/274 (12%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP +V L T EG VY+VGTAH S +S R+V I ++P VV +ELC RVSM
Sbjct: 57 LPGTVTELV---TEEGSK--VYVVGTAHFSDDSKRDVVKTIQEVQPDVVVVELCQYRVSM 111
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + +++ K K++ L L KV++H L + PG EFR A
Sbjct: 112 LKMDEKTLLKEAKEINLEKLQQAVKQNGVMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 171
Query: 236 FEEAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F+EA K K LGDRP+ +T +R + W K+KL + F + + S +D+ + +
Sbjct: 172 FKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVEKCKQ 230
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEH--------------- 339
+ D+L ++ EM FP L T+V ERD Y++ L + A
Sbjct: 231 K----DLLEQMMAEMIGEFPDLHRTIVSERDIYLTYMLRQAAKRLELPRASEAEPRKSIP 286
Query: 340 SSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
S VV VVG GH+ GI+ W + + ++M++P P
Sbjct: 287 SVVVGVVGMGHVPGIEKNWSTDLNIQEIMSVPPP 320
>gi|449103972|ref|ZP_21740715.1| TraB family protein [Treponema denticola AL-2]
gi|449105935|ref|ZP_21742627.1| TraB family protein [Treponema denticola ASLM]
gi|451967674|ref|ZP_21920903.1| TraB family protein [Treponema denticola US-Trep]
gi|448964425|gb|EMB45097.1| TraB family protein [Treponema denticola AL-2]
gi|448966503|gb|EMB47158.1| TraB family protein [Treponema denticola ASLM]
gi|451703460|gb|EMD57826.1| TraB family protein [Treponema denticola US-Trep]
Length = 396
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 128/256 (50%), Gaps = 36/256 (14%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+GTAHVSKES ++VE+ I P V +EL R LT + D W+
Sbjct: 18 EIILLGTAHVSKESIKDVESTIREENPDCVCVELDEVRYKSLTSK-----------DTWQ 66
Query: 204 --------KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDR 251
++ F +L + LA K+ S L + PG E + A E + + K + DR
Sbjct: 67 QINISQVLREGKGFLLLANLVLASFQKKLGSDLGVKPGDEMKAAIEVSQELNIKTEMVDR 126
Query: 252 PVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMS 310
P+ TL+R W K W + KLL + L AF S E L ++++ + + ++QEM+
Sbjct: 127 PIHTTLKRAWAKNRGWGRSKLLATLLSAAF---SNEKLEEDEIEKLKNQSAMDNMMQEMA 183
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ------PVPV 364
+ P + L+ ERD+Y++S + + + +VAV+G GHL G + + K+ V
Sbjct: 184 EYLPNIKGVLIDERDRYLASKIWE--SSGKKIVAVLGAGHLPGTERFIKELEAGTKTTDV 241
Query: 365 HDLMTIPSPKPAVSAL 380
D+ IP PK VS +
Sbjct: 242 SDIEVIP-PKSTVSKI 256
>gi|398345969|ref|ZP_10530672.1| pheromone shutdown protein [Leptospira broomii str. 5399]
Length = 410
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 17/252 (6%)
Query: 131 ILTCDSTAEGGTCD-----VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML 185
I T +ST T D + ++GTAH+S++S EV I+ KP V+ +ELC SR+ +
Sbjct: 7 IQTAESTEPIRTFDLDGSAITILGTAHISQKSIEEVSRIVSEKKPDVICVELCGSRMRSV 66
Query: 186 TPQN----LKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMK 241
N L + V + MW + + K + I PG E R A EE +
Sbjct: 67 KDPNHWKKLDIFKVFKERKMWLLLSSLILSSFQ----KKMGNGSIRPGDEMRRAIEEGER 122
Query: 242 YGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVD 300
G ++ DR + ITL+R W K+ W ++ L+S L + F+ E+++ ++EM D
Sbjct: 123 TGARIFPVDREISITLKRAWWKVGFWDRM-YLFSALVTSLFVK--EEISPEKIEEMKSDD 179
Query: 301 MLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
+L + ++ + ++ ++ ERD Y++ + + A + AVVG GHL+GI ++
Sbjct: 180 VLKDLFSQLPSRYESVKNVIIDERDAYLAQRIREAAKHGKKIFAVVGAGHLEGIMKNIQR 239
Query: 361 PVPVHDLMTIPS 372
V L +PS
Sbjct: 240 DQSVTHLDILPS 251
>gi|421106393|ref|ZP_15566966.1| TraB family protein [Leptospira kirschneri str. H2]
gi|410008562|gb|EKO62226.1| TraB family protein [Leptospira kirschneri str. H2]
Length = 408
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 122/236 (51%), Gaps = 12/236 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G +V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 30 GKTNVTILGTAHISQKSIDEVQRIIRKEKPDTVCVELCNSRMRSLKDSEHWKKLDIFKVF 89
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A E K G K++ DR V T
Sbjct: 90 KERKMYLLLSSLILSAFQKKLGKGS----IRPGDEMRMAIHEGEKIGAKIVPIDREVSTT 145
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + +++++ LL + L F ED++ ++EM D+L + ++ K + +
Sbjct: 146 LKRAWWNIGIFNRLFLLSALLTSLFV---KEDISEEKIEEMKSEDVLKDLFSQLPKRYES 202
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
+ ++ ERD Y++ + A E + VVG GHLQGI ++ ++ + L +P
Sbjct: 203 IKNVIIDERDSYLAQKIRDSAKEGKKIFVVVGAGHLQGILSHVQEEKDISKLDELP 258
>gi|350560355|ref|ZP_08929195.1| TraB family protein [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349782623|gb|EGZ36906.1| TraB family protein [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 406
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 123/240 (51%), Gaps = 12/240 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMV 199
G ++ L+GTAHVS S R V +I V +ELC SR +ML P ++ + ++
Sbjct: 20 GDTEIVLLGTAHVSPASARTVGDLIATEAFDTVAIELCLSRQRAMLDPDAMRRLDLFSVI 79
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
+ + + ++A I PG+E R A + AM G + L DR + +TLRR
Sbjct: 80 RGGQVPMVAASLALGAYQQRLAEQYGIEPGAEMRAAIDGAMDRGLPLALIDRDIGLTLRR 139
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLME 318
+ +P W ++ L+ LF + S E ++ ++ + DML E ++ L
Sbjct: 140 AYRAVPWWQRMGLV-GGLFASVL--SREKIDESEIERLKQGDMLESTFSEFAEQSRELYL 196
Query: 319 TLVHERDQYMSSTLLKVATE--HSSVVAVVGKGHLQGIKNYW---KQPVP--VHDLMTIP 371
L+ ERD+YM++ L ++A + H ++AVVG GHL+GI+NY +QP P +H L P
Sbjct: 197 PLIDERDRYMAAHLRRLAADGGHRRILAVVGAGHLKGIENYVELDRQPPPEVLHALEQSP 256
>gi|167537384|ref|XP_001750361.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771189|gb|EDQ84860.1| predicted protein [Monosiga brevicollis MX1]
Length = 1327
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 34/222 (15%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
+LP S +L C A V L+G+AHVS++S EV +I +P VV +ELC R
Sbjct: 34 DLPESCQVL-CSPRAT-----VILIGSAHVSQKSVDEVLQVIRTYRPPVVAVELCRERAG 87
Query: 184 ML-------TPQNLKVPTVGEMVDMWKKKHNT------FGILYSWFLAKVASHLEIFPGS 230
ML + P E+V + ++ ++ LYSW K+ +E+ P
Sbjct: 88 MLKMNYSDTSALQQAEPDFAEIVRIVQQGNSATIAQLFVQSLYSWLATKL--KIEVMP-- 143
Query: 231 EFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN 290
E YGG V+L DRPV +TL RT + W K++ L+ + + S ED+
Sbjct: 144 -------ECESYGGSVVLLDRPVSVTLNRTMGNLTFWDKVRFLFLTISDLWSDLSLEDVE 196
Query: 291 RMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL 332
RM K D+++ +IQE+++AFP L + L+ ERD Y++ L
Sbjct: 197 RMRK----TDVVSQMIQEVTEAFPRLAQPLIAERDAYITHVL 234
>gi|449108222|ref|ZP_21744866.1| TraB family protein [Treponema denticola ATCC 33520]
gi|449118901|ref|ZP_21755302.1| TraB family protein [Treponema denticola H1-T]
gi|449121290|ref|ZP_21757642.1| TraB family protein [Treponema denticola MYR-T]
gi|448951516|gb|EMB32329.1| TraB family protein [Treponema denticola MYR-T]
gi|448951929|gb|EMB32738.1| TraB family protein [Treponema denticola H1-T]
gi|448962072|gb|EMB42766.1| TraB family protein [Treponema denticola ATCC 33520]
Length = 396
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 127/256 (49%), Gaps = 36/256 (14%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+GTAHVSKES +VE+ I P V +EL R LT + D W+
Sbjct: 18 EIILLGTAHVSKESINDVESTIREENPDCVCVELDEVRYKSLTSK-----------DTWQ 66
Query: 204 --------KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDR 251
++ F +L + LA K+ S L + PG E + A E + + K + DR
Sbjct: 67 QINISQVLREGKGFLLLANLVLASFQKKLGSDLGVKPGDEMKAAIEVSQELNIKTEMVDR 126
Query: 252 PVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMS 310
P+ TL+R W K W + KLL + L AF S E L ++++ + + ++QEM+
Sbjct: 127 PIHTTLKRAWAKNRGWGRSKLLATLLSAAF---SNEKLEEAEIEKLKNQSAMDNMMQEMA 183
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ------PVPV 364
+ P + L+ ERD+Y++S + + + +VAV+G GHL G + + K+ V
Sbjct: 184 EYLPNIKGVLIDERDRYLASKIWE--SSGKKIVAVLGAGHLPGTERFIKELEAGTKTTDV 241
Query: 365 HDLMTIPSPKPAVSAL 380
D+ IP PK VS +
Sbjct: 242 SDIEVIP-PKSTVSKI 256
>gi|147765742|emb|CAN73376.1| hypothetical protein VITISV_019101 [Vitis vinifera]
Length = 364
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 116/227 (51%), Gaps = 28/227 (12%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
+++L+GT H+S S +VE +++ + P V +ELC SR M T G + +
Sbjct: 92 EIWLLGTTHISSFSAADVERVVEVVNPDNVVVELCRSRQLM---------TDGLIWIHGR 142
Query: 204 KKHNTFGILY--------------SWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILG 249
+ N L+ + F +K++S + G EFR A + + K G +++LG
Sbjct: 143 IRQNCLFFLHIAGGQTALALRLLLAVFSSKISSDVNRPFGDEFRAARKASEKVGAQIVLG 202
Query: 250 DRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEM 309
DRP++ITL R W + K+ L+ S + + S+E +K + D + ++
Sbjct: 203 DRPIEITLERAWNSLEWNEKLSLVISVIRG---ITSSELSTNEMKXLSTDDSTFQLYDQL 259
Query: 310 SKAFPTLMETLVHERDQYMSSTLL--KVATEHSSVVAVVGKGHLQGI 354
S A+P+L++ L+HERD Y++ +L K VV V+GKGH+ G+
Sbjct: 260 SVAYPSLLQPLIHERDTYLAWSLKRSKAVNGGKRVVGVIGKGHMNGV 306
>gi|451945654|ref|YP_007466249.1| pheromone shutdown-related protein TraB [Desulfocapsa sulfexigens
DSM 10523]
gi|451905002|gb|AGF76596.1| pheromone shutdown-related protein TraB [Desulfocapsa sulfexigens
DSM 10523]
Length = 398
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 17/239 (7%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G V L+GTAH+S+ES VE +I P V +EL R LT Q+L + +
Sbjct: 21 GEKTVLLIGTAHISQESVALVEEVISQENPDCVCIELDDKRYKSLTEKKKWQSLDLKQI- 79
Query: 197 EMVDMWKKKHNTFGI--LYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQ 254
+ K+ +T I L + + K+ L + PG+E A + A + + L DR V+
Sbjct: 80 ----IRDKQLSTLMINLLMASYQKKLGGQLGVTPGAELLKAAQTATERNIPIALCDRDVR 135
Query: 255 ITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFP 314
ITLRR W+ + K L + LF + F S E L EM D+L+ ++ EM A P
Sbjct: 136 ITLRRAWKSTSFFKK-GYLVTTLFASLF-DSTEISEEKLAEMKKKDVLSELMDEMGSALP 193
Query: 315 TLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ--PVPVHDLMTIP 371
+ E L++ERD Y+S + A E + +VAVVG GH+ GIK + + + + TIP
Sbjct: 194 DVKEVLINERDIYLSEKI--KAAEGNRLVAVVGAGHVAGIKRIFNEDRSAELEAITTIP 250
>gi|403068924|ref|ZP_10910256.1| pheromone shutdown protein [Oceanobacillus sp. Ndiop]
Length = 390
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 118/235 (50%), Gaps = 13/235 (5%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN-LKVPTVGEMVDMWKKK 205
L+GTAHVSK S +V+A+I+ KP V +EL +R +T N K + E++ K
Sbjct: 18 LIGTAHVSKNSAEQVKAVIEAEKPDSVCIELDDARYQSITEGNKWKNTDIFEIIKNKKAT 77
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S F ++A I PG E E A + G +++L DR +QIT R W +
Sbjct: 78 LLLMNLAISSFQKRMAKQFGINPGQEMIQGVESAKEIGAELVLADRDIQITFSRIWGNIG 137
Query: 266 LWHKIKLLYSFLFQAFFLP--SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHE 323
L K LL + F S EDL +M K+ D ++ + L E ++ FP L L+ E
Sbjct: 138 LKGKAMLLMQVIGGIFSNDSISEEDLEKM-KQQDTINAMLL---EFTEYFPKLKTPLIDE 193
Query: 324 RDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVS 378
RDQY+S + E VVA++G H+ GI K+ HDL + S +PA S
Sbjct: 194 RDQYLSQKIKDAPGE--KVVAILGAAHVPGIT---KEIQHDHDLKRL-SRRPAKS 242
>gi|339501169|ref|YP_004699204.1| TraB family protein [Spirochaeta caldaria DSM 7334]
gi|338835518|gb|AEJ20696.1| TraB family protein [Spirochaeta caldaria DSM 7334]
Length = 393
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 122/218 (55%), Gaps = 17/218 (7%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ LVGTAH+S+ES EV+ +I P +V +EL + R++ +T Q+ + +D+ K
Sbjct: 15 EIILVGTAHISRESIEEVQEVIRNEHPDMVCVELDAGRLASMTQQD-----SWDKLDLVK 69
Query: 204 --KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
K+ F ++ + LA ++ ++ + PG E + A + A + G L DR VQ+TL
Sbjct: 70 VFKEGKGFLLMANLVLASFQRRLGLNMGVKPGDEMKAAIDTASELGIPFSLCDREVQLTL 129
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMSKAFPTL 316
+R W W K KLL + + AF ++ +KE +++D + + E+++ P +
Sbjct: 130 KRAWASCGFWSKNKLLATLISSAFTTEKIDEQQIESIKEKNELDSM---MGELAEYLPEV 186
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGI 354
TL+ ERD Y+++ + A++ S +VAV+G GH+ G+
Sbjct: 187 KRTLIDERDHYLAAKIW--ASQGSRIVAVIGAGHMGGV 222
>gi|390458936|ref|XP_003732202.1| PREDICTED: LOW QUALITY PROTEIN: traB domain-containing protein
[Callithrix jacchus]
Length = 377
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 151/302 (50%), Gaps = 45/302 (14%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 38 SDVDAFNLLLEMKLKRRRQRPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDV 91
Query: 162 -EAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGI 211
+ I ++P VV +ELC RVSML Q L + + + V +++
Sbjct: 92 VKXTIREVQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKLQQAV----RQNGLMSG 147
Query: 212 LYSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPL 266
L L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R +
Sbjct: 148 LMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSF 207
Query: 267 WHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQ 326
W K++L + F + + S +D+ R ++ D+L ++ EM FP L T+V ERD
Sbjct: 208 WQKVRLAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDV 262
Query: 327 YMSSTLLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
Y++ L + A S VV VVG GH+ GI+ W + + ++MT+P
Sbjct: 263 YLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIMTVP 322
Query: 372 SP 373
P
Sbjct: 323 PP 324
>gi|148235771|ref|NP_001089270.1| TraB domain containing [Xenopus laevis]
gi|58701921|gb|AAH90189.1| MGC84987 protein [Xenopus laevis]
Length = 373
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 114/222 (51%), Gaps = 20/222 (9%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP +V LT T EG VY+VGTAH S S ++V I ++P VV +ELC RVSM
Sbjct: 55 LPDTVTELT---TEEGSK--VYIVGTAHFSDSSKQDVVKTIQEVQPDVVVVELCQYRVSM 109
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + +++ K K++ L L KV++H L + PG EFR A
Sbjct: 110 LKMDEETLLKEAKEINLEKLHQAIKQNGVMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 169
Query: 236 FEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F+EA K K LGDRP+ +T +R + +W KIKL + + P +ED K
Sbjct: 170 FKEASKVPFCKFHLGDRPIPVTFKRAIAALSIWQKIKLAWGLC--SLSDPISEDDVEKCK 227
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA 336
+ D+L ++ EM FP L T+V ERD Y++ L + A
Sbjct: 228 QK---DLLEQMMAEMIGEFPDLHRTIVSERDIYLTYMLKQAA 266
>gi|51245529|ref|YP_065413.1| pheromone shutdown protein TraB [Desulfotalea psychrophila LSv54]
gi|50876566|emb|CAG36406.1| related to pheromone shutdown protein TraB [Desulfotalea
psychrophila LSv54]
Length = 398
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 113/219 (51%), Gaps = 11/219 (5%)
Query: 146 YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKK 205
YLVGTAH+S+ES V+ +I +P V LEL R L+ ++ ++ + KKK
Sbjct: 26 YLVGTAHISQESVELVQRVIRQEQPDCVCLELDDKRYHSLSQKDSWQAL--DLKQILKKK 83
Query: 206 HNT---FGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
+L + + ++ + + PG+E A + A + V L DR V++TLRR W+
Sbjct: 84 QLATLFISMLMASYQKRLGGKMGVDPGAELLAAAQTAQELQIPVSLCDRDVRVTLRRAWK 143
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
L+ K LL S L AF E L E+ D+L +++E+ P L + L+
Sbjct: 144 STSLFRKGYLLTSLLASAF--DKTEISEEKLSELRKKDVLEDLMEELGANLPELKKVLID 201
Query: 323 ERDQYMSSTLLKVATEHSS-VVAVVGKGHLQGIKNYWKQ 360
ERD Y+S K+ + H VVAVVG GHLQGIK + Q
Sbjct: 202 ERDIYLSE---KIKSSHGDRVVAVVGAGHLQGIKKQFSQ 237
>gi|302340758|ref|YP_003805964.1| TraB family protein [Spirochaeta smaragdinae DSM 11293]
gi|301637943|gb|ADK83370.1| TraB family protein [Spirochaeta smaragdinae DSM 11293]
Length = 396
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 115/213 (53%), Gaps = 7/213 (3%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMW 202
++ L+GTAHVS+ES EV I+ P V +E+ + R SM QN + ++G ++
Sbjct: 19 EIILLGTAHVSRESVDEVRGTIEAESPDHVCVEIDAGRYRSMTEGQNWQSTSIGSVLRQR 78
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
+ + + F K+ S L PG E A E A G DR +Q+TLRR W
Sbjct: 79 RGFLLLANLALASFQRKLGSELGNKPGEEMMAAIEAAKSVGADFSFCDREIQVTLRRAWA 138
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMSKAFPTLMETLV 321
K W+K K++ S LF + F +E L+ ++++ + L ++ E+++ P++ E L+
Sbjct: 139 KSSFWNKNKMIAS-LFGSVF--GSEKLSEEEIEQLKRKNALEEMMGELAEYLPSVKEVLI 195
Query: 322 HERDQYMSSTLLKVATEHSSVVAVVGKGHLQGI 354
ERD+Y+++ + + + ++AV+G GH +GI
Sbjct: 196 DERDRYLATKIFEAPGK--KIIAVIGAGHAEGI 226
>gi|19699285|gb|AAL91254.1| AT5g52030/MSG15_11 [Arabidopsis thaliana]
gi|23308347|gb|AAN18143.1| At5g52030/MSG15_11 [Arabidopsis thaliana]
Length = 391
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 122/233 (52%), Gaps = 25/233 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML--------TPQNLK----- 191
++LVGT+H+S ES VE ++ +KP V +ELC SR ++ QNLK
Sbjct: 94 IWLVGTSHISPESASIVERVVRTVKPDNVAVELCRSRAGIMYTSSVGGEVDQNLKSGELS 153
Query: 192 ------VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGK 245
+ VG +D+ + +L + F +K++S + G EFR A + + + G +
Sbjct: 154 LTGTGFLGAVGRSLDLGGQTALALRLLLAVFSSKLSSVADRPFGDEFRAARKASEEVGAQ 213
Query: 246 VILGDRPVQITLRRTWEKMPLWHKIKLLYSF--LFQAFFLPSAEDLNRMLKEMDDVDMLT 303
++LGDRP++ITL+R W + K L+ + + + SA +L +E D+
Sbjct: 214 LVLGDRPIEITLQRAWNSLKWGEKFNLVMAVTRVITSSSGISAAELKE--QETDENSGSL 271
Query: 304 LVIQEMSKAFPTLMETLVHERDQYMSSTLL--KVATEHSSVVAVVGKGHLQGI 354
+ + +S ++P L+ L+HERD Y++ +L K +VV V+GKGH+ G+
Sbjct: 272 QLYERLSFSYPALLMPLIHERDTYLAWSLKRSKAVNGCKTVVGVIGKGHMNGV 324
>gi|296109609|ref|YP_003616558.1| TraB family protein [methanocaldococcus infernus ME]
gi|295434423|gb|ADG13594.1| TraB family protein [Methanocaldococcus infernus ME]
Length = 388
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 133/266 (50%), Gaps = 25/266 (9%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+YL+GTAHVSK+S VE I+ ++P VV +EL R L ++ K E++ +
Sbjct: 12 IYLLGTAHVSKDSVESVEKAIEEIEPDVVAVELDQRRFLSLISRDEKKIDFKEVIKRGEF 71
Query: 205 KHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKM 264
++ S ++ L I PGSE + A E A + L DR ++IT R EK+
Sbjct: 72 LKTFLYLILSQSQKEIGEKLGIKPGSEMKKAIEVANSKNIPIALIDRDIEITFSRLLEKL 131
Query: 265 PLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDD-----VDMLTLVIQEMSKAFPTLMET 319
KI LL + L + E +LKEM + ++ML +E+S P + +
Sbjct: 132 TFKDKINLLKALLTEE---DVGEVNEELLKEMKENPEKFIEML----KELS---PKIYDV 181
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK-----QPVPVHDLMTIPSPK 374
V ERD++M+ TL +V+ V+A+VG GH++GI NY + + +++L+ + +
Sbjct: 182 FVDERDKFMAKTLYEVSKGKEKVLAIVGAGHVKGIINYLSKLDNGEEIDIYELLKVKKKR 241
Query: 375 PAVSALKVLSSLGVAVAGVAIISGIY 400
+++ LG ++ II +Y
Sbjct: 242 FSLAKF-----LGYTISLAIIIIFLY 262
>gi|421096377|ref|ZP_15557080.1| TraB family protein [Leptospira borgpetersenii str. 200801926]
gi|410360528|gb|EKP11578.1| TraB family protein [Leptospira borgpetersenii str. 200801926]
Length = 439
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 121/223 (54%), Gaps = 13/223 (5%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVGEMV 199
+V ++GTAH+S++S EV+ II KP +V +ELC+SR+ L + L + V +
Sbjct: 64 NVTILGTAHISQKSIDEVQKIIRKEKPDMVCVELCNSRMRSLKENEHWKKLDIFKVFKER 123
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
M+ + + L K + I PG E R+A +E K G +++ DR + TL+R
Sbjct: 124 KMYLLLSSLILSAFQKKLGKGS----IRPGDEMRMAIDEGEKIGARIVPIDREISTTLKR 179
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPTLME 318
W + +++++ LL + L F ED++ ++EM D+L + ++ K + ++
Sbjct: 180 AWWNIGIFNRMFLLSALLTSLFV---KEDVSEEKIEEMKSEDVLKDLFSQLPKRYESIKN 236
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNY-WKQ 360
++ ERD Y++ + + E + AVVG GHLQGI N+ W++
Sbjct: 237 VIIDERDSYLAQKIRDASKEGKKIFAVVGAGHLQGIMNHVWEE 279
>gi|323489075|ref|ZP_08094310.1| hypothetical protein GPDM_07010 [Planococcus donghaensis MPA1U2]
gi|323397258|gb|EGA90069.1| hypothetical protein GPDM_07010 [Planococcus donghaensis MPA1U2]
Length = 388
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 132/267 (49%), Gaps = 13/267 (4%)
Query: 139 EGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN-LKVPTVGE 197
E G ++ L+GTAHVSK S +V+A+I+ +P V +EL + R +T + K + +
Sbjct: 10 EYGEKELILIGTAHVSKASAEQVKAVIEAEQPDSVCIELDAQRYESVTQDSKWKETDIFK 69
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
++ K + S F ++A I PG E A + G +++L DR +Q+T
Sbjct: 70 VIKDKKASLLLMNLAISSFQNRLADQFGIKPGQEMIQGIASAKEVGAELVLADRNIQVTF 129
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLP--SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPT 315
R W + K +LL S F F S EDL +M + D L V+ + ++AFP
Sbjct: 130 SRIWGNIGFMGKAQLLTSVFFSIFSKETISEEDLEKMKSQ----DTLNAVMDDFTQAFPK 185
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKP 375
L L+ ERDQY++ + + + VVAV+G H+ GI K+ HDL + P
Sbjct: 186 LKTPLIDERDQYLAQKIKEAPGK--KVVAVLGAAHVPGII---KEVHNDHDLKKLSEVPP 240
Query: 376 AVSALKVLSSLGVAVAGVAIISGIYIN 402
KV+ + +A VA+I+ ++N
Sbjct: 241 KSKWPKVI-GWAIPLALVAMIAITFMN 266
>gi|456863748|gb|EMF82196.1| TraB family protein [Leptospira weilii serovar Topaz str. LT2116]
Length = 432
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 122/236 (51%), Gaps = 12/236 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 54 GKTIVTVLGTAHISQKSIDEVQKIIRKEKPDTVCVELCNSRMRSLKDNEHWKKLDIFKVF 113
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A E K G +++ DR + T
Sbjct: 114 KERKMYLLLSSLILSAFQKKLGKDS----IRPGDEMRMAIVEGEKIGARIVPIDREISTT 169
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + +++++ LL + L F ED++ ++EM D+L + ++ K + +
Sbjct: 170 LKRAWWNIGIFNRMFLLSALLTSLFV---KEDVSEEKIEEMKSEDVLKDLFSQLPKRYES 226
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
+ +++ERD Y++ + A E + AVVG GHLQGI N ++ + L +P
Sbjct: 227 IKNVIINERDSYLAQKIRDAAKEGKKIFAVVGAGHLQGIMNQVQEERDISSLDHLP 282
>gi|432330886|ref|YP_007249029.1| pheromone shutdown-related protein TraB [Methanoregula formicicum
SMSP]
gi|432137595|gb|AGB02522.1| pheromone shutdown-related protein TraB [Methanoregula formicicum
SMSP]
Length = 401
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 139/273 (50%), Gaps = 21/273 (7%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
++ ++GTAHVS+ES EV I+ P VV +EL +R S L Q + P+V +++++
Sbjct: 2 AEIKIIGTAHVSQESVNEVRTAIEDYHPDVVAIELDPARYSALKKQA-RDPSVNDVLEV- 59
Query: 203 KKKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K N+ +L W LA K+ + + PG+E + A EA + + L DR +++TL
Sbjct: 60 -KNFNS--LLVQWLLAYLQRKIGFDVGVEPGAEMKAAIAEAEQRNIPIALVDRDIRVTLM 116
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMSKAFPTLM 317
R W + K+K++++ + + + ++++ LKE + +D+ V++E K P
Sbjct: 117 RFWNTLGFIEKLKMIWALIISIAEIDNGQEIDIESLKEQNVIDV---VMEEFRKFSPNGA 173
Query: 318 ETLVHERDQYMSSTL--LKVATEHSSVVAVVGKGHLQGIKNYWKQP--VPVHDLMT---I 370
L+ ERD +++ L LK ++AV+G GH +GI Y P +P D +T
Sbjct: 174 RALIDERDAFIAHQLVILKAQRPEGKILAVIGAGHRKGISAYLDDPKTLPPFDSLTKEPK 233
Query: 371 PSPKPAVSALKVLSSLGVAVAGVAIISGIYINC 403
P P V V +A +A SG+ +N
Sbjct: 234 PFPWAKVFGFGVTFLFAFLLAAIA-FSGVGLNV 265
>gi|430759583|ref|YP_007215440.1| Pheromone shutdown protein [Thioalkalivibrio nitratireducens DSM
14787]
gi|430009207|gb|AGA31959.1| Pheromone shutdown protein [Thioalkalivibrio nitratireducens DSM
14787]
Length = 406
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 119/230 (51%), Gaps = 10/230 (4%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMV 199
G ++ L+GTAHVS S R V +I V +ELC SR +ML P ++ + ++
Sbjct: 20 GDTEIVLLGTAHVSPASARIVGDLIATKAFDTVAIELCLSRQRAMLDPDAMRRLDLFSVI 79
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
+ + + ++A I PG+E R A + AM G + L DR + +TLRR
Sbjct: 80 RGGQVPMVAASLALGAYQQRLAEQYGIEPGAEMRAAIDGAMDRGLPLALIDRDIGLTLRR 139
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLME 318
+ +P W ++ L+ LF + S E ++ ++ + DML E ++ L
Sbjct: 140 AYRAVPWWQRMGLV-GGLFASVL--SREKIDESEIERLKQGDMLESTFSEFAEQSRELYL 196
Query: 319 TLVHERDQYMSSTLLKVATE--HSSVVAVVGKGHLQGIKNYW---KQPVP 363
L+ ERD+YM++ L ++A + H ++AVVG GHL+GI+NY +QP P
Sbjct: 197 PLIDERDRYMAAHLRRLAADGGHRRILAVVGAGHLKGIENYVALDRQPPP 246
>gi|426394915|ref|XP_004063728.1| PREDICTED: LOW QUALITY PROTEIN: traB domain-containing protein
[Gorilla gorilla gorilla]
Length = 383
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 148/307 (48%), Gaps = 49/307 (15%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 38 SDVDAFNLLLEMKLKRRRQRPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDV 91
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTVGEMVDMWKKKHNTFGIL 212
I ++P VV +ELC RVSML Q L + + + V +++ L
Sbjct: 92 VKTIREVQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKLQQAV----RQNGLMSGL 147
Query: 213 YSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLW 267
L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R + W
Sbjct: 148 MQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFW 207
Query: 268 HKIKLLYSFLFQAFFLP------SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLV 321
K++L + + S +D+ R ++ D+L ++ EM FP L T+V
Sbjct: 208 QKVRLAWGLCARGTLGDLLSDPISKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIV 263
Query: 322 HERDQYMSSTLLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHD 366
ERD Y++ L + A S VV VVG GH+ GI+ W + + +
Sbjct: 264 SERDVYLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQE 323
Query: 367 LMTIPSP 373
+MT+P P
Sbjct: 324 IMTVPPP 330
>gi|456012433|gb|EMF46136.1| Pheromone shutdown protein [Planococcus halocryophilus Or1]
Length = 388
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 132/267 (49%), Gaps = 13/267 (4%)
Query: 139 EGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN-LKVPTVGE 197
E G ++ L+GTAHVSK S +V+A+I+ +P V +EL + R +T + K + +
Sbjct: 10 EYGEKELILIGTAHVSKASAEQVKAVIEAEQPDSVCIELDAQRYESVTQDSKWKETDIFK 69
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
++ K + S F ++A I PG E A + G +++L DR +Q+T
Sbjct: 70 VIKDKKASLLLMNLAISSFQNRLADQFGIKPGQEMIQGIASAKEAGAELVLADRNIQVTF 129
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLP--SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPT 315
R W + K +LL S F F S EDL +M + D L V+ + ++AFP
Sbjct: 130 SRIWGNIGFMGKAQLLTSVFFSIFSKETISEEDLEKMKSQ----DTLNAVMDDFTQAFPK 185
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKP 375
L L+ ERDQY++ + + + +VAV+G H+ GI K+ HDL + P
Sbjct: 186 LKTPLIDERDQYLAQKIKEAPGK--KIVAVLGAAHVPGII---KEVHNDHDLKKLSEVPP 240
Query: 376 AVSALKVLSSLGVAVAGVAIISGIYIN 402
KV+ + +A VA+I+ ++N
Sbjct: 241 KSKWPKVI-GWAIPLALVAMIAITFMN 266
>gi|168030476|ref|XP_001767749.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681069|gb|EDQ67500.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 608
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 28/241 (11%)
Query: 139 EGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLK---VPT 194
E D+YLVGT+HVS++S EV +I +KP V +EL R SML QN +
Sbjct: 367 EENGADLYLVGTSHVSQQSADEVRDVIRRVKPDYVLVELDRKRYNSMLQRQNGQNNPFAF 426
Query: 195 VGEMVDMWKKKHNTFGIL----------YSWFLAKVASHLEIFPGSEFRVAFEEAMKYGG 244
V +MV+ +N G + + W LA + + PG EF+VA +E K G
Sbjct: 427 VQQMVETLT--NNNIGAVGKVLGLGLSGFYWLLA----YWGLQPGQEFKVAIQEGKKAGA 480
Query: 245 KVILGDRPVQITLRRTWEKMPLWHKIKLLY----SFLFQAFFLPSAEDLNRM-LKEMDDV 299
K++LGD+ + +TL+ E+ + ++ S + Q + +M +++ D
Sbjct: 481 KIVLGDQDIDVTLKHFGEQTSVAEALQFFAQPMPSDIAQKMSGTTPRAPRQMEFEQLRDR 540
Query: 300 DMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK 359
++ + +EM K P L L+ ER++ M+ L ++ VVAVVG HL GI+ W+
Sbjct: 541 KLVRQLNEEMEKKAPALTNILLRERNESMTKALRNLS---GKVVAVVGLAHLDGIEQLWR 597
Query: 360 Q 360
+
Sbjct: 598 E 598
>gi|389819820|ref|ZP_10209505.1| hypothetical protein A1A1_15848 [Planococcus antarcticus DSM 14505]
gi|388463189|gb|EIM05559.1| hypothetical protein A1A1_15848 [Planococcus antarcticus DSM 14505]
Length = 387
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 13/262 (4%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP-QNLKVPTVGEMVDMW 202
++ L+GTAHVSK S +V+A+I+ +P V +EL + R +T K + +++
Sbjct: 14 ELILIGTAHVSKASAEQVKAVIEAEQPDSVCIELDAQRYESVTQGSKWKETDIFKVIKDK 73
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K + S F ++A I PG E A + G +++L DR +Q+T R W
Sbjct: 74 KASLLLMNLAISSFQNRLADQFGIKPGQEMIQGIASAKEAGAELVLADRNIQVTFSRIWG 133
Query: 263 KMPLWHKIKLLYSFLFQAFFLP--SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
+ K +LL S F F S EDL +M + D L V+ + ++AFP L E L
Sbjct: 134 NIGFMGKAQLLTSVFFSIFSKETISEEDLEKMKSQ----DTLNAVMDDFTQAFPKLKEPL 189
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSAL 380
+ ERDQY++ + + +VAV+G H+ GI K+ HDL + P
Sbjct: 190 IDERDQYLAQKIKNAPGK--KIVAVLGAAHVPGII---KEVHNEHDLAKLSEVPPKSKWP 244
Query: 381 KVLSSLGVAVAGVAIISGIYIN 402
K++ + +A VA+I+ ++N
Sbjct: 245 KII-GWAIPLALVAMIAITFMN 265
>gi|328876931|gb|EGG25294.1| hypothetical protein DFA_03543 [Dictyostelium fasciculatum]
Length = 606
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 105/187 (56%), Gaps = 8/187 (4%)
Query: 191 KVPTVGEMVDMWKKKH--NTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVIL 248
K T+ EM+ + K+ +L + + K + ++ PG+EF A+ E+ K G K++L
Sbjct: 371 KRATLSEMIALVKENGLPGLLQVLMAEMIRKAGNQSKVGPGAEFITAYLESKKVGAKIVL 430
Query: 249 GDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQE 308
GDR V+ITL+R W + W KIK ++ +F + +D++ LK D+ ++ +++E
Sbjct: 431 GDRLVEITLQRVWNSLTRWEKIKFVFYLFIASFSEVTEQDID-ALKNSDE-QLVEKLLEE 488
Query: 309 MSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLM 368
+ FP+++ ++V ERDQYM++ L + +VA+VGKGH+ GI W DL
Sbjct: 489 FKEKFPSVVRSIVTERDQYMAARLR--MSPGRKIVAIVGKGHVGGIIREWTNYSI--DLS 544
Query: 369 TIPSPKP 375
+ SP P
Sbjct: 545 LLESPFP 551
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 14/95 (14%)
Query: 95 DEVRDESSDRDETNGAVPVPEETKKVLPE----ELPRSVVILTCDSTAEGGTCDVYLVGT 150
D+ +DE S ETNG + +++ E ELP S +L T + LVG+
Sbjct: 11 DQQQDEESVTSETNG------DNDEIVLEPIDFELPSSATVLYSPFT----NATIILVGS 60
Query: 151 AHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML 185
HV + S EV II KP VF+ELC+SR ++
Sbjct: 61 IHVHQSSSDEVSDIIRRWKPDTVFIELCASRAGLV 95
>gi|398341688|ref|ZP_10526391.1| pheromone shutdown protein [Leptospira inadai serovar Lyme str. 10]
Length = 426
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 123/252 (48%), Gaps = 21/252 (8%)
Query: 133 TCDSTAEGGTCD-----VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLT 186
T +ST T D + ++GTAH+S++S EV I+ KP V+ +ELC SR+ S+
Sbjct: 25 TAESTEPIRTFDLNGSVITILGTAHISQKSIEEVSRIVSEKKPDVICVELCGSRMRSVKD 84
Query: 187 P---QNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYG 243
P + L + V + MW + + K + I PG E R A EE + G
Sbjct: 85 PDHWKKLDIFKVFKERKMWLLLSSLILSSFQ----KKMGNGSIRPGDEMRRAIEEGERTG 140
Query: 244 GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLP---SAEDLNRMLKEMDDVD 300
++ DR + ITL+R W K+ W ++ L+S L + F+ SAE + +EM D
Sbjct: 141 ARIFPVDREISITLKRAWWKVGFWDRM-YLFSALVTSLFVKEEISAEKI----EEMKSDD 195
Query: 301 MLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
+L + ++ + ++ ++ ERD Y++ + + A + AVVG GHL+GI
Sbjct: 196 VLKDLFSQLPSRYESVKNVIIDERDAYLAQRIREAAKHGRKIFAVVGAGHLEGIMKNIAS 255
Query: 361 PVPVHDLMTIPS 372
V L +PS
Sbjct: 256 DQSVTHLDILPS 267
>gi|157119300|ref|XP_001653346.1| TraB, putative [Aedes aegypti]
gi|157119302|ref|XP_001653347.1| TraB, putative [Aedes aegypti]
gi|108875368|gb|EAT39593.1| AAEL008613-PA [Aedes aegypti]
gi|108875369|gb|EAT39594.1| AAEL008613-PB [Aedes aegypti]
Length = 513
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 143/296 (48%), Gaps = 36/296 (12%)
Query: 123 EELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV 182
+ LP +V +LT T G VYLVGTAH S+ S +V ++ ++P VV LELC SRV
Sbjct: 217 KNLPDTVTLLT---TPFGSK--VYLVGTAHFSENSQNDVSLVMRNVQPNVVMLELCPSRV 271
Query: 183 SMLT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFR 233
+L +++ + + +V + F IL AK+ L + PG EFR
Sbjct: 272 HILKYDEKALLEEAKDINLAKIQSIVKTNGTINGLFYILLLNMSAKITKKLGMAPGGEFR 331
Query: 234 VAFEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM 292
A +EA + +I LGDR + ITL+R + LW +KL+ L + SAE++ +
Sbjct: 332 RAVDEASRIPNCLIQLGDRQINITLQRALRGLSLWQTVKLIPKLLIMDDDI-SAEEVEQC 390
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHS---------SVV 343
++ D+L ++ EM+ FP V ERD Y+ +L A +VV
Sbjct: 391 KQK----DLLEEIMLEMAGEFPAFGRVFVEERDLYLCHSLQVAALPQELPNGLLRPVNVV 446
Query: 344 AVVGKGHLQGIKNYWK--QPVPVHDLMTIP----SPKPAVSALKVLSSLGVAVAGV 393
VVG GH GI +W + + ++TIP S K A LK +LG+ GV
Sbjct: 447 GVVGIGHAAGIVKHWGKVESSAIASIVTIPPASFSHKAAKFVLK-YGTLGLCAYGV 501
>gi|449127219|ref|ZP_21763493.1| TraB family protein [Treponema denticola SP33]
gi|448944887|gb|EMB25764.1| TraB family protein [Treponema denticola SP33]
Length = 396
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 127/256 (49%), Gaps = 36/256 (14%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+GTAHVSKES ++VE+ I P V +EL R LT + D W+
Sbjct: 18 EIILLGTAHVSKESIKDVESTIREENPDCVCVELDEVRYKSLTSK-----------DTWQ 66
Query: 204 --------KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDR 251
++ F +L + LA K+ S L + PG E + A E + + K + DR
Sbjct: 67 QINISQVLREGKGFLLLANLVLASFQKKLGSDLGVKPGDEMKAAIEVSQELNIKTEMVDR 126
Query: 252 PVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMS 310
P+ TL+R W K W + KLL + L AF S E L ++++ + + ++QEM+
Sbjct: 127 PIHTTLKRAWAKNRGWGRSKLLATLLSAAF---SNEKLEEDEIEKLKNQSAMDNMMQEMA 183
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ------PVPV 364
+ P + L+ ERD+Y++S + + + +VAV+G GHL G + + K+ V
Sbjct: 184 EYLPNIKGVLIDERDRYLASKIWE--SSGKKIVAVLGAGHLPGTERFIKELEAGTKTTDV 241
Query: 365 HDLMTIPSPKPAVSAL 380
D+ IP PK S +
Sbjct: 242 SDIEVIP-PKSTGSKI 256
>gi|340386068|ref|XP_003391530.1| PREDICTED: traB domain-containing protein-like, partial [Amphimedon
queenslandica]
Length = 192
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 19/191 (9%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP +V +L C + ++ VYLVGTAH SKES +V+ I ++P V LELC R +
Sbjct: 9 LPDTVSVLDCPNGSK-----VYLVGTAHFSKESATDVQKTIQQVRPDGVVLELCVERQMI 63
Query: 185 LTPQNLKVPTVGEMVDMWKK-------KHNTFGILYSWFL---AKVASHLEIFPGSEFRV 234
L ++ + + ++ W+K + G+ ++ F+ A + L + PG EFR+
Sbjct: 64 LNMRDEDIMQQAKDLN-WEKVRAFMASEGQVAGLTHAVFIKISANLMDKLGVAPGGEFRM 122
Query: 235 AFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYS-FLFQAFFLP-SAEDLNRM 292
F+E K G ++LGDR +++T +R +P+W +++L Y F AF L S ED+ +M
Sbjct: 123 GFQEGTKVGSTILLGDRSIRMTFKRALRALPIWQQLRLFYMLFTSVAFDLDISPEDIEKM 182
Query: 293 LKEMDDVDMLT 303
K D V+MLT
Sbjct: 183 -KNFDMVEMLT 192
>gi|456877371|gb|EMF92399.1| TraB family protein [Leptospira santarosai str. ST188]
Length = 408
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 122/236 (51%), Gaps = 12/236 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 30 GKTIVTILGTAHISQKSIDEVQRIIRKEKPDTVCVELCNSRMRSLKDNEHWKKLDIFKVF 89
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A E + G K++ DR + T
Sbjct: 90 KERKMYLLLSSLILSAFQKKLGKDS----IRPGDEMRMAIGEGERIGAKIVPIDREISTT 145
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + +++++ LL + L F ED++ ++EM D+L + ++ K + +
Sbjct: 146 LKRAWWNIGIFNRMILLSALLTSLFV---KEDVSEEKIEEMKSEDVLKDLFSQLPKRYES 202
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
+ ++ ERD Y++ + + E + AVVG GHLQGI N+ ++ + L +P
Sbjct: 203 IKNVIIDERDFYLAQKIRDASKEGKKIFAVVGAGHLQGIMNHIQEERDISALDHLP 258
>gi|297584138|ref|YP_003699918.1| TraB family protein [Bacillus selenitireducens MLS10]
gi|297142595|gb|ADH99352.1| TraB family protein [Bacillus selenitireducens MLS10]
Length = 389
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 114/225 (50%), Gaps = 8/225 (3%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN-LKVPTVGEMVDMW 202
++ LVGTAHVSK+S +V+ +I+ +P V +EL R + +N K + +++
Sbjct: 15 EIILVGTAHVSKQSADQVKEVIENEQPDTVCVELDEQRFQSIQNENQWKDMDIFKVIKEK 74
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K +L S F ++A I PG E A + G +++L DR +QIT R W+
Sbjct: 75 KASLLMMNLLISSFQKRMAKQFGIKPGQEMIQGIASAEEQGAELVLADRNIQITFARIWK 134
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
+ W K KL+ + + + + E L++M DML + E S+AFP L L+
Sbjct: 135 NVGFWGKAKLMTAIM--GSVISNEEISEEELEKMKSEDMLNSALTEFSRAFPKLKTPLID 192
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDL 367
ERDQY++ + + E +VAV+G H+ GI K HDL
Sbjct: 193 ERDQYLAQMIKEAPGE--KIVAVLGAAHVPGILEEIKHD---HDL 232
>gi|170038985|ref|XP_001847327.1| TraB [Culex quinquefasciatus]
gi|167862605|gb|EDS25988.1| TraB [Culex quinquefasciatus]
Length = 502
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 134/279 (48%), Gaps = 34/279 (12%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP +V +LT T +G VYLVGTAH S+ S +V ++ ++P VV LELC SRV +
Sbjct: 198 LPDTVTLLT---TPQGSK--VYLVGTAHFSESSQNDVSLVMRNVQPNVVMLELCPSRVHI 252
Query: 185 LT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVA 235
L +++ + + +V + F IL AK+ L + PG EFR A
Sbjct: 253 LKYDEKALLEEAKDINLAKIQSIVKSNGAINGLFYILLLNMSAKITKKLGMAPGGEFRRA 312
Query: 236 FEEAMKYGGKVI-LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
EA + +I LGDR + ITL+R + LW IKL+ L + E ++
Sbjct: 313 VNEAARIPNCLIQLGDRQINITLQRALRGLSLWQTIKLIPKLLIMDDDISVEE-----VE 367
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA---------TEHSSVVAV 345
+ D+L ++ EM+ FP V ERD Y+ +L A + +VV V
Sbjct: 368 QCKQKDLLEEIMLEMAGEFPAFGRVFVAERDLYLCHSLQVAALPQQLADRTMQPVNVVGV 427
Query: 346 VGKGHLQGIKNYWK--QPVPVHDLMTIPSPKPAVSALKV 382
VG GH GI +W Q + ++TIP PA ++ +V
Sbjct: 428 VGIGHAAGIIKHWGKVQSAEIASIVTIP---PASTSHRV 463
>gi|282890413|ref|ZP_06298941.1| hypothetical protein pah_c016o160 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174033|ref|YP_004650843.1| hypothetical protein PUV_00390 [Parachlamydia acanthamoebae UV-7]
gi|281499795|gb|EFB42086.1| hypothetical protein pah_c016o160 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336478391|emb|CCB84989.1| putative uncharacterized protein [Parachlamydia acanthamoebae UV-7]
Length = 391
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 106/191 (55%), Gaps = 5/191 (2%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN-LKVPTVGEMVDMW 202
D+YLVGTAHVS +S ++V I+ L+P V +ELC SR L Q+ K + E+V
Sbjct: 20 DIYLVGTAHVSAQSVQDVRDTIEKLRPDTVCIELCPSRYQSLNQQDAWKKMDLFEVVRKG 79
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K + ++ S F ++ L + PG+E A + +++L DR V++T++R W
Sbjct: 80 KALYLMGHLIMSGFYQRIGQQLGVKPGAEMLEGARLANELNAELVLADRSVEVTIKRVWR 139
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLV 321
+ W+++K + L FFL AE++++ ++E+ + + L + E +K FP E ++
Sbjct: 140 NLNFWNQMKAT-AHLLSGFFL--AEEIDQQSIEELKNPENLESALHEFAKEFPQAKEKVI 196
Query: 322 HERDQYMSSTL 332
ERD Y++ +
Sbjct: 197 DERDWYLAEKI 207
>gi|326935698|ref|XP_003213905.1| PREDICTED: traB domain-containing protein-like [Meleagris
gallopavo]
Length = 374
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 116/224 (51%), Gaps = 20/224 (8%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP +V L T +G VY+VGTAH S S ++V I ++P VV +ELC RVSM
Sbjct: 57 LPSTVTEL---ETEDGSK--VYVVGTAHFSDSSKKDVVKTIQEVQPDVVVVELCQYRVSM 111
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + +++ K K++ L L KV++H L + PG EFR A
Sbjct: 112 LKMDEKTLLKEAKEINLEKLQQAIKQNGVMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 171
Query: 236 FEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F+EA K K LGDRP+ +T +R + W K+KL + F + + S +D+ + +
Sbjct: 172 FKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVEKCKQ 230
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE 338
+ D+L ++ EM FP L T+V ERD Y++ L + A +
Sbjct: 231 K----DLLEQMMAEMIGEFPDLHRTIVSERDIYLTYMLKQAAKQ 270
>gi|374724303|gb|EHR76383.1| putative PrgY-like protein (pheromone shutdown protein) [uncultured
marine group II euryarchaeote]
Length = 389
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 119/219 (54%), Gaps = 14/219 (6%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V ++GTAH+S S V+A I+ +P +V +ELCSSR + LT N ++ G ++ + K+
Sbjct: 13 VRVIGTAHISSSSVAAVKAQIESFQPDIVAVELCSSRHTALT-SNRRLDKEG-LLKVVKE 70
Query: 205 KHNTFGILYSWFLA---KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTW 261
+L S A K+ PG+E A + A + +V L DR +Q TLRR W
Sbjct: 71 GKAPLVMLQSLLAAEQRKMGLDEGEQPGAELLAAVKTAEEANLEVALIDRDIQTTLRRAW 130
Query: 262 EKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLV 321
++M + K+K+L+S L ED + + ++D D+L+ +++E+ P L+
Sbjct: 131 KRMKFFEKVKILWSLLGD----DEDEDAPEVSQLLEDQDLLSSLMEELKTFSPGAGAVLI 186
Query: 322 HERDQYMSSTLLKVATEHSS---VVAVVGKGHLQGIKNY 357
ERD Y++ + A E S ++AVVG GHL+GI+ +
Sbjct: 187 DERDAYLAGKI--AALEQGSDLRILAVVGAGHLKGIEAH 223
>gi|332296968|ref|YP_004438890.1| TraB family protein [Treponema brennaborense DSM 12168]
gi|332180071|gb|AEE15759.1| TraB family protein [Treponema brennaborense DSM 12168]
Length = 397
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 20/222 (9%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+GTAH+S+ES EV A I KP V +EL R Q+++ P +D+ K
Sbjct: 14 EIILLGTAHISQESIAEVTAAIHTEKPDCVAIELDEQRY-----QSMQNPESWRNLDIVK 68
Query: 204 KKHNTFG------ILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
N G ++ S F ++ + + + PG E + A + G ++ DRP+Q+TL
Sbjct: 69 VLKNGQGFVLMANLVLSSFQKRMGADVGVKPGEEMKAGIAAAEELGIPSVMVDRPIQMTL 128
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLP--SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPT 315
RR W K LW K KLL L AF SAE + + LK ++D + + E+++ P
Sbjct: 129 RRAWAKNSLWGKCKLLAVLLSSAFEKEEISAEQIEK-LKNESEMDSM---MNEIAEYLPA 184
Query: 316 LMETLVHERDQYMSSTLLKVATEHSS---VVAVVGKGHLQGI 354
+ L+ ERD+Y+++ + + +VAV+G GHL G+
Sbjct: 185 VKTVLIDERDRYLAAHIWDAQINGQAARKIVAVLGAGHLPGV 226
>gi|304315305|ref|YP_003850452.1| hypothetical protein MTBMA_c15600 [Methanothermobacter marburgensis
str. Marburg]
gi|302588764|gb|ADL59139.1| conserved hypothetical protein [Methanothermobacter marburgensis
str. Marburg]
Length = 230
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 10/222 (4%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ ++GTAHVS ES EV I +KP VV +EL R L + + + +
Sbjct: 5 ELKIIGTAHVSGESVDEVRRTILEMKPDVVAVELDPGRYRRLMEEKMGIKRDEPSLRDAL 64
Query: 204 KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
+ N IL WFL K+ + + PGSE A + A + G V L DR + +T++R
Sbjct: 65 RSGNIGVILAGWFLTYFQRKIGEDIGVKPGSEMLEAIDAAHEVGAGVALIDRDIGVTMQR 124
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
M K++ + + ++F ED+ R ++ + D L V+ E + P+
Sbjct: 125 AIGSMSRREKLRFFLAIM-RSFI--GGEDV-RDIESLKSDDTLAEVMGEFREISPSAYRV 180
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP 361
LV ERD +M+ LL + E VVAVVG GH +GI++Y + P
Sbjct: 181 LVEERDAFMAHRLLSI--EEDRVVAVVGAGHRRGIEHYLRNP 220
>gi|433461040|ref|ZP_20418656.1| TraB family protein [Halobacillus sp. BAB-2008]
gi|432190541|gb|ELK47558.1| TraB family protein [Halobacillus sp. BAB-2008]
Length = 390
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 110/219 (50%), Gaps = 11/219 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMV 199
G + L+GTAHVSK+S +V+ +I+ +P V +EL R S+ K + E++
Sbjct: 14 GEKEFILIGTAHVSKQSAEQVKEVIEAERPDSVCVELDEQRFESIRDGDRWKNTDIFEVI 73
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K + S F K+A I G E E A K G +++L DR +QIT R
Sbjct: 74 KSKKASLLLVNLAISSFQKKMAKQFGIQAGQEMIQGIESAEKTGAELVLADRNIQITFAR 133
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
W + K KLL S ++ F + + DML ++Q+M+ +FPTL +
Sbjct: 134 IWGNIGFKGKAKLLLSIIYGIFSKEEISEEELEKLKTQ--DMLDGMLQDMTDSFPTLKKP 191
Query: 320 LVHERDQYMSSTLLKVATEHS---SVVAVVGKGHLQGIK 355
L+ ERDQY++ ++ +H+ VVAV+G H+ GIK
Sbjct: 192 LIDERDQYLAHSI-----KHAPGNKVVAVLGAAHVPGIK 225
>gi|336065381|ref|YP_004560239.1| pheromone shutdown protein [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|334295327|dbj|BAK31198.1| pheromone shutdown protein [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 380
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 11/234 (4%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWK 203
++ V TAHVSK+S +V+ I+ +KPQ V +EL +R +++ K + +++ +
Sbjct: 11 LHFVSTAHVSKQSVLDVQQAIETIKPQAVCIELDDNRARNLMESDKYKELDIKQIIKTKR 70
Query: 204 KKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
++ S + K+A L G E R A E A V DR VQ+T +R W
Sbjct: 71 VGAFIATLVLSSYQKKLADDLNTSVGQEMRQAIESAQDVDASVHYIDRDVQVTFKRIWGN 130
Query: 264 MPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDV---DMLTLVIQEMSKAFPTLMETL 320
+ + KI LL + LF F ED N +++++ D+L ++EM + P + ++L
Sbjct: 131 LTFFKKISLLSTLLFSVF-----EDDNVSEADVENLKESDLLFEAVREMDEKLPAISKSL 185
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPK 374
+HER+ YM+ + A +V VVG H +G+ ++DL IP+ K
Sbjct: 186 LHERNAYMAEKI--KALPEQEIVIVVGAAHTEGLIESLNHEHSLYDLNQIPAKK 237
>gi|15214638|gb|AAH12445.1| TRABD protein [Homo sapiens]
Length = 330
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 130/258 (50%), Gaps = 38/258 (14%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTV 195
VY+VGTAH S +S R+V I ++P VV +ELC RVSML Q L + +
Sbjct: 29 VYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKL 88
Query: 196 GEMVDMWKKKHNTFGILYSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGD 250
+ V +++ L L KV++H L + PG EFR AF+EA K K LGD
Sbjct: 89 QQAV----RQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGD 144
Query: 251 RPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMS 310
RP+ +T +R + W K++L + F + + S +D+ R ++ D+L ++ EM
Sbjct: 145 RPIPVTFKRAIAALSFWQKVRLAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMI 199
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVATE---------------HSSVVAVVGKGHLQGIK 355
FP L T+V ERD Y++ L + A S VV VVG GH+ GI+
Sbjct: 200 GEFPDLHRTIVSERDVYLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIE 259
Query: 356 NYWKQPVPVHDLMTIPSP 373
W + + ++MT+P P
Sbjct: 260 KNWSTDLNIQEIMTVPPP 277
>gi|313244021|emb|CBY14891.1| unnamed protein product [Oikopleura dioica]
Length = 383
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 33/279 (11%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVP-----TVGEMV 199
+Y+VGTAH+S++S +V IID +KP V +ELC+ R ++ + T ++V
Sbjct: 84 IYVVGTAHLSRDSNHQVLEIIDRVKPDRVMVELCNERQGLMYMSEKAIMDQPDITWSDLV 143
Query: 200 DMWKKKHNTFGILYSWFLAKV--ASH-LEIFPGSEFRVAFEEAMKY-GGKVILGDRPVQI 255
DM K K ++ + A H L+ PG EFR+A ++ K KV+LGDR + +
Sbjct: 144 DMAKVKGIGAAVVQLSLMGATDHAKHELQTIPGGEFRLAKQQCDKVPNCKVVLGDRRISV 203
Query: 256 TLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPT 315
T RR M W KI+ + ++ + ++ E ++EM D L ++ EM FP+
Sbjct: 204 TFRRLTAAMSTWEKIRFVAGTIWDSIWVKEGE-----IEEMKQEDTLEKLMDEMKVDFPS 258
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSV--------------VAVVGKGHLQGIKNYWKQP 361
++ ERD Y++ L A V VAVVG GH +GI + +
Sbjct: 259 AARVILDERDTYLTGMLQATARSPQKVPKSISEDGIVPPVIVAVVGIGHQKGIMRLYNEK 318
Query: 362 V----PVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAII 396
V + L +P +P L V+S +G A +I
Sbjct: 319 VVTKSDLDKLNAVPKQEPVNWPL-VVSMIGGNCALAVVI 356
>gi|255539559|ref|XP_002510844.1| conserved hypothetical protein [Ricinus communis]
gi|223549959|gb|EEF51446.1| conserved hypothetical protein [Ricinus communis]
Length = 390
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 119/243 (48%), Gaps = 35/243 (14%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVP-----TVGEM 198
++LVGT+H+S ES +VE ++ +KP V +ELC SR V L K+ T E
Sbjct: 92 IWLVGTSHISTESATQVERVVRAVKPDNVVVELCRSRQVLFLFMLIYKIKAGIMYTSNEG 151
Query: 199 VDMWKKKHNTFGILYSWFLAKVASHLEIFP-------------------------GSEFR 233
D + + N F + + F V + + G EFR
Sbjct: 152 EDNQQLRSNMFSLSGNGFFGAVGRSINLGGQTALALRLLLALFSSKISNDVNRPFGDEFR 211
Query: 234 VAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRML 293
A + + + G +++LGDRP++ITL R W + K+ L+ S + S+ +
Sbjct: 212 AARKVSEEIGAQIVLGDRPIEITLERAWNALKWKEKLSLVSSVV--RGITSSSHTSKKDF 269
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSS--VVAVVGKGHL 351
K D D L+ +++S ++P+L+ L+HERD Y++ +L + ++S VV V+GKGH+
Sbjct: 270 KVPDTDDDTFLLYEKLSFSYPSLLPPLIHERDTYLAWSLKRSKAVNNSKRVVGVIGKGHM 329
Query: 352 QGI 354
G+
Sbjct: 330 NGV 332
>gi|89894280|ref|YP_517767.1| hypothetical protein DSY1534 [Desulfitobacterium hafniense Y51]
gi|423073860|ref|ZP_17062595.1| TraB family protein [Desulfitobacterium hafniense DP7]
gi|89333728|dbj|BAE83323.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361855273|gb|EHL07257.1| TraB family protein [Desulfitobacterium hafniense DP7]
Length = 390
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 116/235 (49%), Gaps = 6/235 (2%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMW 202
++ L+GTAHVSK+S V+ +I+ +P V +EL R S++ K + +++
Sbjct: 17 EIILIGTAHVSKQSAELVKEVIEAERPDSVCIELDEQRYKSIVEGDKWKETDIFKIIKEK 76
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K + S F ++A G E E A + G +++L DR +QIT R W
Sbjct: 77 KATLLLMNLALSSFQKRLAKEFGTNAGQEMLQGIESAQEVGAELVLADRNIQITFSRIWH 136
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
+ W K KLL +F F + + L+++ DML ++++ +++FP L L+
Sbjct: 137 NVGFWGKCKLLMEIIFSIFDDEAISE--EELEKLKSQDMLNGILKDFTESFPKLKTPLID 194
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAV 377
ERDQY+S + + E +VAV+G H+ GI + + L +P PK V
Sbjct: 195 ERDQYLSQKIKEAPGE--KIVAVLGAAHVPGITEEIHKEHDLQALTELP-PKSIV 246
>gi|224093482|ref|XP_002189507.1| PREDICTED: traB domain-containing protein [Taeniopygia guttata]
Length = 404
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 116/224 (51%), Gaps = 20/224 (8%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP +V L T +G VY+VGTAH S S ++V I ++P VV +ELC RVSM
Sbjct: 57 LPSTVTEL---DTEDGSK--VYVVGTAHFSDSSKKDVVKTIQEVQPDVVVVELCQYRVSM 111
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + +++ K K++ L L KV++H L + PG EFR A
Sbjct: 112 LKMDEKTLLKEAKEINLEKLQQAIKQNGVMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 171
Query: 236 FEEAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F+EA K K LGDRP+ +T +R + W K+KL + F + + S +D+ + +
Sbjct: 172 FKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVEKCKQ 230
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE 338
+ D+L ++ EM FP L T+V ERD Y++ L + A +
Sbjct: 231 K----DLLEQMMAEMIGEFPDLHRTIVSERDIYLTYMLKQAAKQ 270
>gi|262193786|ref|YP_003264995.1| TraB family protein [Haliangium ochraceum DSM 14365]
gi|262077133|gb|ACY13102.1| TraB family protein [Haliangium ochraceum DSM 14365]
Length = 391
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 134/252 (53%), Gaps = 19/252 (7%)
Query: 139 EGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEM 198
EG T +YLVGTAHVS+ S EV+ +I+ L+P VV +ELC +R + LT Q+ +
Sbjct: 17 EGRT--LYLVGTAHVSEASVDEVQDVIERLRPDVVCVELCQARYNALTSQD-----AWKN 69
Query: 199 VDMWK--KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRP 252
+D++K ++ T +L + + ++ L + PG+E A ++A + G +V+L DR
Sbjct: 70 LDIFKVIREGKTLFLLANLAIGAYQRRIGDDLGVKPGAELLAAVKKAEEVGARVVLIDRD 129
Query: 253 VQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSK 311
+ ITL+RTW + + K+ L + Q+ F S E ++ + ++ + L+ ++ E +K
Sbjct: 130 IHITLKRTWANLGFFDKMA-LGGAIVQSMF--SREQISAVEIENLKQQAHLSEMLSEFAK 186
Query: 312 AFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
P + E L+ ERDQY+ S + + V H+ G++ +PV L +P
Sbjct: 187 EMPAVKEPLIDERDQYLMSGVEAAGGDKVVAVVG--AAHVPGMQANLGKPVDRARLERLP 244
Query: 372 SPKPAVSALKVL 383
P V ALK L
Sbjct: 245 PPSRIVQALKWL 256
>gi|219668693|ref|YP_002459128.1| TraB family protein [Desulfitobacterium hafniense DCB-2]
gi|219538953|gb|ACL20692.1| TraB family protein [Desulfitobacterium hafniense DCB-2]
Length = 390
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 116/235 (49%), Gaps = 6/235 (2%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMW 202
++ L+GTAHVSK+S V+ +I+ +P V +EL R S++ K + +++
Sbjct: 17 EIILIGTAHVSKQSAELVKEVIEAERPDSVCIELDEQRYKSIVEGDKWKETDIFKIIKEK 76
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K + S F ++A G E E A + G +++L DR +QIT R W
Sbjct: 77 KATLLLMNLALSSFQKRLAKEFGTNAGQEMLQGIESAQEVGAELVLADRNIQITFSRIWH 136
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
+ W K KLL +F F + + L+++ DML ++++ +++FP L L+
Sbjct: 137 NVGFWGKCKLLMEIIFSIFDDEAISE--EELEKLKSQDMLNGILKDFTESFPKLKTPLID 194
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAV 377
ERDQY+S + + E +VAV+G H+ GI + + L +P PK V
Sbjct: 195 ERDQYLSQKIKEAPGE--KIVAVLGAAHVPGITEEIHKEHDLQALTELP-PKSIV 246
>gi|297261354|ref|XP_001111774.2| PREDICTED: traB domain-containing protein-like isoform 2 [Macaca
mulatta]
Length = 330
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 23/206 (11%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT---------PQNLKVPTV 195
VY+VGTAH S +S R+V I ++P VV +ELC RVSML Q L + +
Sbjct: 30 VYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKL 89
Query: 196 GEMVDMWKKKHNTFGILYSWFLAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGD 250
+ V +++ L L KV++H L + PG EFR AF+EA K K LGD
Sbjct: 90 QQAV----RQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGD 145
Query: 251 RPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMS 310
RP+ +T +R + W K++L + F + + S +D+ R ++ D+L ++ EM
Sbjct: 146 RPIPVTFKRAIAALSFWQKVRLAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMI 200
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVA 336
FP L T+V ERD Y++ L + A
Sbjct: 201 GEFPDLHRTIVSERDIYLTYMLRQAA 226
>gi|23100894|ref|NP_694361.1| pheromone shutdown protein [Oceanobacillus iheyensis HTE831]
gi|22779128|dbj|BAC15395.1| pheromone shutdown protein [Oceanobacillus iheyensis HTE831]
Length = 390
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 10/229 (4%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMV 199
G + L+GTAHVSK S +V+A+ID +P V +EL + R S++ K + +++
Sbjct: 12 GNKEYILIGTAHVSKNSAEQVKAVIDEEQPDAVCIELDAQRYQSVMEGNKWKDTDIFQVI 71
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K + S F ++A I PG E E A ++ K++L DR +QIT R
Sbjct: 72 KDKKAVMLLMNLAISSFQKRMAKQFGIRPGEEMIQGIESAKEHHAKLVLADRDIQITFAR 131
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLME 318
W + L K L+ + F S E+++ +++M D + +++E ++ FP L +
Sbjct: 132 IWGNINLKGKAMLMMQVVGSIF---SKEEISEQEMEKMKQQDTINAMLKEFTEYFPDLKK 188
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDL 367
L+ ERDQY+S + + E VVAV+G H+ GI K+ HDL
Sbjct: 189 PLIDERDQYLSQKIKEAPGE--KVVAVLGAAHVPGIT---KEIEKEHDL 232
>gi|116329657|ref|YP_799376.1| pheromone shutdown protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116332542|ref|YP_802259.1| pheromone shutdown protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116122550|gb|ABJ80443.1| Pheromone shutdown protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116127409|gb|ABJ77501.1| Pheromone shutdown protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 408
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 120/224 (53%), Gaps = 15/224 (6%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
+V ++GTAH+S++S EV+ II KP V +ELC+SR+ ++LK + +D++K
Sbjct: 33 NVTILGTAHISQKSIDEVQKIIRKEKPDTVCVELCNSRM-----RSLKENEHWKKLDIFK 87
Query: 204 -----KKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K + L K I PG E R+A E K G K++ DR + TL+
Sbjct: 88 VFKERKMYLLLSSLILSAFQKKFGKGSIRPGDEMRMAIGEGEKIGAKIVPIDREISTTLK 147
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPTLM 317
R W + +++++ LL + L F ED++ ++EM D+L + ++ K + ++
Sbjct: 148 RAWWNIGIFNRMFLLSALLTSLFV---KEDVSEEKIEEMKSEDVLKDLFSQLPKRYESIK 204
Query: 318 ETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNY-WKQ 360
++ ERD Y++ + + E + AVVG GHLQGI N+ W++
Sbjct: 205 NVIIDERDFYLAQKIRDASKEGKKIFAVVGAGHLQGIMNHVWEE 248
>gi|116748308|ref|YP_844995.1| TraB determinant protein, partial [Syntrophobacter fumaroxidans
MPOB]
gi|116697372|gb|ABK16560.1| TraB determinant protein [Syntrophobacter fumaroxidans MPOB]
Length = 243
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 106/231 (45%), Gaps = 9/231 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKH 206
L+GTAHVS++S II+ KP V LELC +R L G + +
Sbjct: 19 LIGTAHVSRDSADLTGRIIEEEKPDTVCLELCEARYRALIEGG--SSGRGSFAGLLGSGN 76
Query: 207 NTFGI---LYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
T + + +F ++ L + PG E R A E A G + L DR + TL R W
Sbjct: 77 WTLLVSSAMLLYFQKRIGDKLGVKPGDEMRRAVEAANAVGADIRLIDRDARTTLLRAWTP 136
Query: 264 MPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHE 323
M KI+L F F A SA + ++EM D L ++ E FP L L+ E
Sbjct: 137 MKRKDKIRLFREF-FSALKDISALK-EKDIEEMKRGDALETLVAEFGDTFPWLRHVLIDE 194
Query: 324 RDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPK 374
RD ++ + + +VAVVG H+QGI W +PV + L IP+ +
Sbjct: 195 RDLILAHRIR--TSPGRKIVAVVGAAHVQGILANWDKPVDMEQLERIPAKR 243
>gi|389578961|ref|ZP_10168988.1| pheromone shutdown-related protein TraB [Desulfobacter postgatei
2ac9]
gi|389400596|gb|EIM62818.1| pheromone shutdown-related protein TraB [Desulfobacter postgatei
2ac9]
Length = 388
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 133/267 (49%), Gaps = 18/267 (6%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVGEMVD 200
+ L+GTAHVS+ S + V I+ +P V +ELC +R++ + QN+ ++V
Sbjct: 16 IILIGTAHVSRHSAQLVLDTIESEQPDTVCVELCGNRLAAIRDKDRWQNM------DIVK 69
Query: 201 MWKKKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ K+K +L + F K+A I PG E A A K G ++ DR +Q TL
Sbjct: 70 IIKEKKALMLFMNLLLASFQKKIADKFGIKPGQEMINAIAAAEKAGAAIVPADREIQTTL 129
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLM 317
R W M W K KL+++ + F S E +++M D+L ++ E+ + P +
Sbjct: 130 SRIWRGMGFWEKTKLIFAMVLS--FGQSEEIEETDIEKMKHQDILQSLLSEVKEDHPIIG 187
Query: 318 ETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAV 377
+ L++ERDQ+++ + + + +VAVVG H+ GI Y Q P+ DL + + PA
Sbjct: 188 KVLINERDQFLAENIR--SAQGDKIVAVVGAAHVPGILEYINQDTPI-DLAALKTLPPAG 244
Query: 378 SALKVLSSLGVAVAGVAIISGIYINCK 404
K+L L + + I+G + K
Sbjct: 245 KVGKILKWLIPGLIVMLFIAGFLMEGK 271
>gi|149180426|ref|ZP_01858931.1| hypothetical protein BSG1_05385 [Bacillus sp. SG-1]
gi|148852618|gb|EDL66763.1| hypothetical protein BSG1_05385 [Bacillus sp. SG-1]
Length = 399
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 13/259 (5%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKKK 205
L+GTAHVSK+S +V+ +I+ +P V +EL R S++ K + +++ K
Sbjct: 29 LIGTAHVSKKSAEQVKEVIEREQPDAVCVELDEPRYQSVMEGNKWKEMDIFKVIKEGKAS 88
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S F ++A I G E E A + G K++L DR +QIT R W ++
Sbjct: 89 LLLMNLAISSFQKRMAKQFGINAGQEMIQGIESAKEVGAKLVLADRNIQITFARIWNQVG 148
Query: 266 LWHKIKLLYSFLFQAFFLPS--AEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHE 323
K KLL ++ F S E+L R+ + DML ++ + +K FP L + L+ E
Sbjct: 149 FIGKGKLLMQIIYSIFSNESITEEELERIKSQ----DMLDAMLNDFTKHFPRLKKPLIDE 204
Query: 324 RDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVL 383
RDQY+S + + + +VAV+G H+ GIK K+ HDL + P K++
Sbjct: 205 RDQYLSQKIKEAPGK--KIVAVLGAAHVPGIKEEIKKE---HDLKHLDERPPKSKVPKII 259
Query: 384 SSLGVAVAGVAIISGIYIN 402
+ V +A+I+ +I+
Sbjct: 260 -GWAIPVLILAVIAYTFIS 277
>gi|71897005|ref|NP_001025903.1| traB domain-containing protein [Gallus gallus]
gi|60098601|emb|CAH65131.1| hypothetical protein RCJMB04_3p9 [Gallus gallus]
Length = 374
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 116/224 (51%), Gaps = 20/224 (8%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP +V L +T +G VY+VGTAH S S ++V I ++P VV +ELC RV M
Sbjct: 57 LPSTVTEL---NTEDGSK--VYVVGTAHFSDSSKKDVVKTIQEVQPDVVVVELCQYRVPM 111
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + +++ K K++ L L KV++H L + PG EFR A
Sbjct: 112 LKMDEKTLLKEAKEINLEKLQQAIKQNGVMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 171
Query: 236 FEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
F+EA K K LGDRP+ +T +R + W K+KL + F + + S +D+ + +
Sbjct: 172 FKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVEKCKQ 230
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE 338
+ D+L ++ EM FP L T+V ERD Y++ L + A +
Sbjct: 231 K----DLLEQMMAEMIGEFPDLHRTIVSERDIYLTYMLKQAAKQ 270
>gi|114320550|ref|YP_742233.1| TraB family protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114226944|gb|ABI56743.1| TraB family protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 397
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 126/246 (51%), Gaps = 28/246 (11%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPTVGEMVDMWKKK 205
L+GTAHVS+ S EV +I V +ELC SR +S+ PQ L E +D++K
Sbjct: 19 LLGTAHVSRASADEVRTLIRSGDFDAVAVELCDSRYLSLTNPQAL------EQMDLFKVL 72
Query: 206 HNTFGILYSWFLA------KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
+ G + + LA ++A I PG+E + A +EA ++L DR + +T++R
Sbjct: 73 RDGRGGMVAASLALGAYQQRLAEQFGIEPGAEMKTAAKEAKAAEKPLMLVDRDIGVTMKR 132
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLP---SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
+ +P W + L+ S LF F + ED+ R+ + D+L E +++ L
Sbjct: 133 LYRNIPWWQRFTLI-SGLFAGLFSREKVTEEDIERLKQG----DILESTFAEFAQSSTRL 187
Query: 317 METLVHERDQYMSSTLLKVATEH--SSVVAVVGKGHLQGIKNYWKQPVP-----VHDLMT 369
+ L+ ERD+YM+S LL+ H +V+ V+G GHL+G+ +PVP +L
Sbjct: 188 YQPLIAERDRYMASRLLQETAGHDYGNVLVVIGAGHLKGLAEALAEPVPDPAAEQAELSK 247
Query: 370 IPSPKP 375
+P P P
Sbjct: 248 MPPPSP 253
>gi|150389485|ref|YP_001319534.1| TraB family protein [Alkaliphilus metalliredigens QYMF]
gi|149949347|gb|ABR47875.1| TraB family protein [Alkaliphilus metalliredigens QYMF]
Length = 390
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKH 206
++GTAHVSK+S +V+ +I+ +P V +EL R + N T ++ + K+K
Sbjct: 17 IIGTAHVSKQSAEQVKEVIELERPDSVCVELDEQRYQSIMDGNRWRNT--DIFRIIKEKK 74
Query: 207 NTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
+T +L S F ++A I PG E E A + ++L DR +Q+T R W+
Sbjct: 75 STLLLVNLLMSSFQKRIAKQFGIQPGQEMIQGIESAKEVEAALVLADRNIQVTFSRIWKN 134
Query: 264 MPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHE 323
+ LW K +LL L L E L+E+ DML+ ++ + + AFP L L+ E
Sbjct: 135 IGLWGKTQLLMQILMSV--LVEEEITEEQLEELKSKDMLSSMLDDFTAAFPRLKIPLIDE 192
Query: 324 RDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVL 383
RDQY++ + + ++AV+G H+ G+ K HDL + P + K++
Sbjct: 193 RDQYLAQKMR--TAPGNKIIAVLGAAHVPGVT---KALEIEHDLNALSQVPPKSNKGKIV 247
Query: 384 SSLGVAVAGVAIISGIYIN 402
S L A I S Y+N
Sbjct: 248 SWLIPAFIIALIASTFYLN 266
>gi|414869804|tpg|DAA48361.1| TPA: hypothetical protein ZEAMMB73_564591 [Zea mays]
Length = 359
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 122/233 (52%), Gaps = 30/233 (12%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN-------LK----- 191
DV+++GT+H+S++S +VE ++ ++P V +ELC SR ++ + LK
Sbjct: 81 DVWILGTSHLSRDSVADVERVLRAVQPDNVVVELCRSRAGIMYASSDSSDEPLLKSNMFS 140
Query: 192 ------VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGK 245
V +++ + +L + F +K+AS G EFR A + G +
Sbjct: 141 LGGSKFFGAVSRSINLGGQSALALRLLLAVFSSKIASSANRPFGEEFRAARRVSEDIGAQ 200
Query: 246 VILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLT-- 303
++LGDRP++ITL R W+ + K KLL S LF+ ++ D+ ++
Sbjct: 201 LVLGDRPIEITLERAWKSLTWDQKAKLLIS-LFRGI-------TSKTHTPQDEKAAVSPY 252
Query: 304 LVIQEMSKAFPTLMETLVHERDQYMSSTLL--KVATEHSSVVAVVGKGHLQGI 354
+ +++S ++P L++ L+HERD +++ +L K + +VV VVGKGH+ GI
Sbjct: 253 ELYEKLSTSYPALLQPLIHERDMFLAWSLKRSKAVNKSRTVVGVVGKGHINGI 305
>gi|381181221|ref|ZP_09890056.1| TraB family protein [Treponema saccharophilum DSM 2985]
gi|380766888|gb|EIC00892.1| TraB family protein [Treponema saccharophilum DSM 2985]
Length = 404
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 142/282 (50%), Gaps = 41/282 (14%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK--K 204
L+GTAHVSKES +V I P V +EL R+S L +N + +D+ K K
Sbjct: 17 LIGTAHVSKESVDDVVRGIREEMPDCVAIELDEERLSSLDDENGW-----KDIDIVKVLK 71
Query: 205 KHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
N F +L + +A ++ + PG E R A + G ++ DRP++ TLRR
Sbjct: 72 DGNGFLLLANLIMASFQRRMGAPSGTRPGDEMRAGIRTASEMGVPSVMVDRPIKTTLRRA 131
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-------LKEMDDVDMLTLVIQEMSKAF 313
W P ++KLL A L SA D N + LK ++D + + E+S+A
Sbjct: 132 WATAPAGSRMKLL------AVLLSSAFDTNEVSTGEIEALKNSSEMDNM---MGEVSEAL 182
Query: 314 PTLMETLVHERDQYMSSTLLK-VATEHSS---VVAVVGKGHLQGIKNYWKQ-----PVPV 364
P++ + L+ ERD+Y+++ + + V+ E+ S VVAV+G GHL G++ + V
Sbjct: 183 PSVKKVLIDERDEYLAAKIWESVSGENGSRNKVVAVLGAGHLPGVERRLSEIAGGCSTDV 242
Query: 365 HDLMTIPSPKPAVSALK-VLSSLGVAVAGVAIISGIYINCKK 405
L ++P K + K ++ +L VA+ I+SG +I KK
Sbjct: 243 SGLCSVPEKKRSARVAKWLVPALIVAL----IVSGFFIGGKK 280
>gi|449271854|gb|EMC82050.1| TraB domain-containing protein [Columba livia]
Length = 351
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 15/204 (7%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK- 203
VY+VGTAH S S ++V I ++P VV +ELC RVSML + + +++ K
Sbjct: 47 VYVVGTAHFSDSSKKDVVKTIQEVQPDVVVVELCQYRVSMLKMDEKTLLKEAKEINLEKL 106
Query: 204 ----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVAFEEAMKY-GGKVILGDRPVQ 254
K+ L L KV++H L + PG EFR AF+EA K K LGDRP+
Sbjct: 107 QQAIKQSGVMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIP 166
Query: 255 ITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFP 314
+T +R + W K+KL + F + + S +D+ + ++ D+L ++ EM FP
Sbjct: 167 VTFKRAIAALSFWQKVKLAWGLCFLSDPI-SKDDVEKCKQK----DLLEQMMAEMIGEFP 221
Query: 315 TLMETLVHERDQYMSSTLLKVATE 338
L T+V ERD Y++ L + A +
Sbjct: 222 DLHRTIVSERDIYLTYMLKQAAKQ 245
>gi|392393692|ref|YP_006430294.1| pheromone shutdown-related protein TraB [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390524770|gb|AFM00501.1| pheromone shutdown-related protein TraB [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 390
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 6/235 (2%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMW 202
++ L+GTAHVSK+S V+ +I+ KP V +EL R S++ + K + +++
Sbjct: 17 EIILIGTAHVSKQSADLVKEVIEAEKPDSVCIELDDQRYKSIVEGEQWKETDIFKIIKEK 76
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K + S F ++A G E E A + G ++L DR +QIT R W
Sbjct: 77 KATLLLMNLAISSFQKRLAKEFGTNAGQEMLQGIESAKEVGADLVLADRNIQITFSRIWH 136
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
+ W K KLL + F S + L+++ DML ++++ +++FP L L+
Sbjct: 137 NVGFWGKCKLLMEIILSIFDDESISE--EELEKLKSQDMLNGMLKDFTESFPKLKTPLID 194
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAV 377
ERDQY+S + + + VVAV+G H+ GI+ + + L +P PK V
Sbjct: 195 ERDQYLSQKIKEAPGD--KVVAVLGAAHVPGIREEIHKEHDLKALTELP-PKSIV 246
>gi|352106589|ref|ZP_08961532.1| pheromone shutdown protein [Halomonas sp. HAL1]
gi|350597632|gb|EHA13760.1| pheromone shutdown protein [Halomonas sp. HAL1]
Length = 427
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 7/228 (3%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPTVGEMV 199
G L+GTAHVS ES +V +ID V +ELC +R SM P + + ++
Sbjct: 39 GETRYTLLGTAHVSAESADDVRKLIDSGAFDAVAIELCDARHQSMSNPDAMGEQDLFQVF 98
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K + F ++A I PG+E R A EEA + ++L DR V +TL+R
Sbjct: 99 REGKAGMVAASLALGAFQQRIADQSGIQPGAEMRAAVEEASRLQLPLLLVDRDVGVTLKR 158
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLME 318
+ +P W + L + S +D+++ ++++ + DML E + L
Sbjct: 159 IYRNVPWWQRFSLFSGLIGSVL---SRQDVSKEDIEKLKEGDMLEATFSEFAAESEALYT 215
Query: 319 TLVHERDQYMSSTLLKVA--TEHSSVVAVVGKGHLQGIKNYWKQPVPV 364
L+ ERD+YM+ L + A + V+ V+G GHL+G + + P+P
Sbjct: 216 PLIRERDRYMALRLAEEAPPGRYQHVLVVIGAGHLKGTGEHLEAPLPA 263
>gi|124486262|ref|YP_001030878.1| hypothetical protein Mlab_1446 [Methanocorpusculum labreanum Z]
gi|124363803|gb|ABN07611.1| TraB family protein [Methanocorpusculum labreanum Z]
Length = 423
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 140/284 (49%), Gaps = 39/284 (13%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQ-------------- 188
++++VGTAHVS++S EV ++D + P V+ +EL R + L Q
Sbjct: 2 TEIHIVGTAHVSQKSIDEVHEVVDAVNPDVIAIELDPGRFAALKQQMKEAEDRENGILPK 61
Query: 189 ---NLKVPTVGEMVDMWKKKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMK 241
+ P V ++ K N +L W LA KV ++ + PG+E + A + A +
Sbjct: 62 EEGKTEAPEVKSLL-----KGNFTLMLVQWILAYVQRKVGMNVGVEPGAEMKEAIKIAEE 116
Query: 242 YGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPS-AEDLN-RMLKEMDDV 299
+++L DR + ITL R W M KIKL++ + E ++ M++ + +
Sbjct: 117 RNIRILLIDRNINITLARFWGNMKFLEKIKLVWVLIRSMVGTDDETESIDTEMVESLTNP 176
Query: 300 DMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSS---VVAVVGKGHLQGIKN 356
DM+ L + E K PT L+ ERD Y++ ++ + EHSS V VVG GHL GI
Sbjct: 177 DMIELALAEFQKFSPTGANALITERDAYLAHGIINL--EHSSFERAVVVVGAGHLPGISK 234
Query: 357 YWKQP--VP-VHDLMTIPSPKPAVSALKVLSSLGVAVAGVAIIS 397
+ + P +P + +L +P P K++ S+ +A+ V I++
Sbjct: 235 FREHPETLPSMKNLNEMPKKYPWG---KIIGSVFIAMFAVIILA 275
>gi|242081975|ref|XP_002445756.1| hypothetical protein SORBIDRAFT_07g025200 [Sorghum bicolor]
gi|241942106|gb|EES15251.1| hypothetical protein SORBIDRAFT_07g025200 [Sorghum bicolor]
Length = 358
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 119/231 (51%), Gaps = 26/231 (11%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN-------LK----- 191
+V+++GT+H+S +S +VE ++ ++P V +ELC SR ++ + LK
Sbjct: 80 EVWILGTSHLSPDSVADVERVLRAVQPDNVVVELCRSRAGIMYVSSDSSDEPLLKSNMFS 139
Query: 192 ------VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGK 245
V +++ + +L + F +K++S G EFR A + G +
Sbjct: 140 LGGSKFFGAVNRSINLGGQSAFALRLLLAVFSSKISSSANRPFGEEFRAARRVSEDIGAQ 199
Query: 246 VILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLV 305
++LGDRP++ITL R W+ + K KLL S LF+ A + E V L
Sbjct: 200 LVLGDRPIEITLERAWKSLTWDQKTKLLIS-LFRGI----ASTTDTPQDEKTAVSPYEL- 253
Query: 306 IQEMSKAFPTLMETLVHERDQYMSSTLL--KVATEHSSVVAVVGKGHLQGI 354
+++S ++P L++ L+HERD +++ +L K + +VV VVGKGH+ GI
Sbjct: 254 YEKLSTSYPALLQPLIHERDMFLAWSLKRSKAVNKSKTVVGVVGKGHINGI 304
>gi|340387042|ref|XP_003392017.1| PREDICTED: traB domain-containing protein-like, partial [Amphimedon
queenslandica]
Length = 224
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 26/227 (11%)
Query: 168 LKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK-------KHNTFGILYSWFL--- 217
++P V LELC R +L ++ + + ++ W+K + G+ ++ F+
Sbjct: 1 VRPDGVVLELCVERQMILNMRDEDIMQQAKDLN-WEKVRAFMASEGQVAGLTHAVFIKIS 59
Query: 218 AKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYS-F 276
A + L + PG EFR+ F+E K G ++LGDR +++T +R +P+W +++L Y F
Sbjct: 60 ANLMDKLGVAPGGEFRMGFQEGTKVGSTILLGDRSIRMTFKRALRALPIWQQLRLFYMLF 119
Query: 277 LFQAFFLP-SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKV 335
AF L S ED+ +M K D V+MLT E++ P L V+ERD ++++L+
Sbjct: 120 TSVAFDLDISPEDIEKM-KNSDMVEMLT---GELAAELPALSHVFVNERDLVLANSLMAA 175
Query: 336 AT-------EHSSVVAVVGKGHLQGIKNYW--KQPVPVHDLMTIPSP 373
A ++V +VG GH+ G+K +W + + L+T+ P
Sbjct: 176 ANCLVEPYAPPVTIVGIVGIGHVNGVKEHWMKDEARDISKLLTLSPP 222
>gi|355785100|gb|EHH65951.1| hypothetical protein EGM_02828, partial [Macaca fascicularis]
Length = 259
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 111/214 (51%), Gaps = 28/214 (13%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LPR+V L AE G+ VY+VGTAH S +S R+V I ++P VV +ELC RVSM
Sbjct: 60 LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSM 114
Query: 185 LT---------PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASH----LEIFPGSE 231
L Q L + + + V +++ L L KV++H L + PG E
Sbjct: 115 LKMDESTLLREAQELSLEKLQQAV----RQNGLMSGLMQMLLLKVSAHITEQLGMAPGGE 170
Query: 232 FRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN 290
FR AF+EA K K LGDRP+ +T +R + W K++L + F + + S +D+
Sbjct: 171 FREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVRLAWGLCFLSDPI-SKDDVE 229
Query: 291 RMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHER 324
R ++ D+L ++ EM FP L T+V ER
Sbjct: 230 RCKQK----DLLEQMMAEMIGEFPDLHRTIVSER 259
>gi|392404727|ref|YP_006441339.1| TraB family protein [Turneriella parva DSM 21527]
gi|390612681|gb|AFM13833.1| TraB family protein [Turneriella parva DSM 21527]
Length = 410
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 115/220 (52%), Gaps = 9/220 (4%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMV 199
G DV L+GTAHVS+ES +VE I KP V +EL R L P + K + +++
Sbjct: 32 GKSDVVLLGTAHVSQESVADVERAIALEKPDRVLIELDEGRAKNLRDPDHWKHMDIVQVI 91
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K IL S F K+ L PG+EF+ A E A V DR ++ITL+R
Sbjct: 92 KSGKIYLLFSSILLSIFQKKMGDRLTSAPGAEFKKAIEVAEAKKISVEFIDREIRITLKR 151
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPTLME 318
W+ + W K++L+ S L + F+ +ED+ + ++++ + D L ++ + F + E
Sbjct: 152 AWQSVGFWGKLRLM-SELIASLFV--SEDMQKDDIEKLKEKDALQSLLDSLPPTFRKIRE 208
Query: 319 TLVHERDQYMSS----TLLKVATEHSSVVAVVGKGHLQGI 354
++ ERDQYM+ ++L V+ V+G GHL+G+
Sbjct: 209 IIIDERDQYMAQKVRDSVLHGKKHPRKVLVVIGAGHLRGM 248
>gi|94265408|ref|ZP_01289161.1| Pheromone shutdown protein [delta proteobacterium MLMS-1]
gi|93454110|gb|EAT04442.1| Pheromone shutdown protein [delta proteobacterium MLMS-1]
Length = 398
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 136/277 (49%), Gaps = 26/277 (9%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWK 203
+ L+GTAH+S++S V +I+ +P V +EL R S+ + ++ + E++ +
Sbjct: 26 LLLLGTAHISRQSVDLVRRVINQQRPDGVCIELDQKRYESLAHRKRWELLDLKEILRRRQ 85
Query: 204 KKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
++ + + K+ L + PGSE A A + G V L DR V+IT+RR W
Sbjct: 86 LATLLINLVLASYQKKLGDKLGVRPGSELLAAATSAQELGIPVALCDRDVRITMRRAWRA 145
Query: 264 MPLWHKIKLLYSFLFQAFF---LPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
P WH+ +L L F S ED L+++ D D+L+ ++ + + P L L
Sbjct: 146 TP-WHRRFMLLGALLAGIFDRSKVSEED----LRQLRDSDLLSEMLAALGRDLPELKRVL 200
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPV--PVHDLMTIPSPKPAVS 378
+ ERD Y++ + + T ++VAVVG GH+ GIK ++ + ++ TIP PA
Sbjct: 201 IDERDTYLAEKIKE--TPGQNLVAVVGAGHVAGIKAAMQRDERHRLPEISTIPPLSPAWK 258
Query: 379 ALK------VLSSL-------GVAVAGVAIISGIYIN 402
AL +L SL G+ VAG ++ I N
Sbjct: 259 ALAWLVPVVILGSLGYIALTKGMEVAGQNLLYWILAN 295
>gi|328949231|ref|YP_004366568.1| TraB family protein [Treponema succinifaciens DSM 2489]
gi|328449555|gb|AEB15271.1| TraB family protein [Treponema succinifaciens DSM 2489]
Length = 395
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 118/219 (53%), Gaps = 19/219 (8%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKKK 205
L+GTAHVSK S EVE I+ KP V +EL +R+ +M ++ K +++++ KKK
Sbjct: 20 LIGTAHVSKASISEVENAIEDQKPDSVAIELDENRLKNMEDKESWKKM---DIIEILKKK 76
Query: 206 HNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
I+ S + ++ I PG E A ++A + G I+ DRPV +TLRR W
Sbjct: 77 QGFLLLANIVLSAYQKRMGEDAGIKPGDEMAAAIKKAKELGIPQIMVDRPVTVTLRRAWA 136
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRM----LKEMDDVDMLTLVIQEMSKAFPTLME 318
K K KLL + AF S E+++ LK+ ++D + +QE+S P + E
Sbjct: 137 KNSFMGKCKLLSLLIATAF---SKEEVSETEIENLKQSSEMDTM---MQELSSYLPAVKE 190
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNY 357
L+ ERD Y++S + + +++AV+G GHL G+ ++
Sbjct: 191 VLIDERDFYLASKIW--SCPQKNILAVLGAGHLPGVSSH 227
>gi|261415162|ref|YP_003248845.1| TraB family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261371618|gb|ACX74363.1| TraB family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 405
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 116/229 (50%), Gaps = 20/229 (8%)
Query: 140 GGTCDVY-----------LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTP 187
GG DVY LVGTAH+S+ S V I+ P V +EL R+ S+ P
Sbjct: 17 GGKSDVYRIHTKDNREIVLVGTAHISQVSKDLVHETIEAESPDTVCVELDDGRLKSIQDP 76
Query: 188 QNLKVPTVGEMVDMWKKKHNTF--GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGK 245
K + +++ KK+ T ++ + ++ + + PGSE + A + A
Sbjct: 77 DRWKNTDLRDVIK--KKQLATLIANLVLGSYQKRMGAQTGVKPGSELKEAVDVANSKNIP 134
Query: 246 VILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLV 305
++L DR ++ITLRRTW P + K LL LF + F E L+++ + D L +
Sbjct: 135 LVLADRDIKITLRRTWACTPWYRKFSLLGG-LFASIF-DKTEISEEELQKIKEKDALNSM 192
Query: 306 IQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGI 354
+QE K FP + + L+ ERDQ+++S + + +VAV+G GHL+GI
Sbjct: 193 MQEFGKTFPEVKQVLIDERDQFLASKIKNAP--GNKIVAVIGAGHLRGI 239
>gi|297608930|ref|NP_001062417.2| Os08g0545700 [Oryza sativa Japonica Group]
gi|255678621|dbj|BAF24331.2| Os08g0545700 [Oryza sativa Japonica Group]
Length = 345
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 123/220 (55%), Gaps = 16/220 (7%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-------SMLTPQNLKVPTVG 196
DV+++GT+H+S+ES +VE ++ ++P V +ELC SR S P++ +G
Sbjct: 79 DVWILGTSHLSEESVADVERVLRAVRPDNVVVELCRSRQDRQPSLQSWNHPEDGNSFLLG 138
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
M+ + +L + F +K++S G EFR A + + G +++LGDRP++IT
Sbjct: 139 TMLAG-GQTALALRLLLAVFSSKISSGANRPFGEEFRAARKVSEDLGAQLVLGDRPIEIT 197
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
L R W+ + K KL+ S LF+ + S D ++ K L +++S ++P+L
Sbjct: 198 LERAWKSLSWDEKTKLVVS-LFRG--ITSTTDTSQDEKAAGSPYEL---YEKLSISYPSL 251
Query: 317 METLVHERDQYMSSTLL--KVATEHSSVVAVVGKGHLQGI 354
++ L+HERD +++ +L K + +VV ++GKGH+ G+
Sbjct: 252 LQPLIHERDMFLAWSLKRSKAVNKSKTVVGIIGKGHMNGV 291
>gi|389796828|ref|ZP_10199879.1| pheromone shutdown-related protein TraB [Rhodanobacter sp. 116-2]
gi|388448353|gb|EIM04338.1| pheromone shutdown-related protein TraB [Rhodanobacter sp. 116-2]
Length = 411
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKKK 205
++GTAHVS+ S VEA++D V +ELC SR SM P+ K + +++ K
Sbjct: 32 VLGTAHVSRSSMEAVEALLDHEHFDAVAVELCDSRAQSMRDPEAFKQMDLFKVIRQGKAG 91
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
++ S F ++A I PG+E + A + A + G + L DR V TL+R W +
Sbjct: 92 MVAASLVLSTFQKRLADQSGIQPGAEMKAAMDGAERRGLPLWLIDREVGTTLKRAWRSVG 151
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
W + LL L F E ++++ D+L E + + L ++L+ ERD
Sbjct: 152 FWQRFGLLGGLLASVFEREEIEQGE--IEKLKQGDLLESAFSEFASSSKPLYDSLIGERD 209
Query: 326 QYMSSTLLKVA-----TEHSSVVAVVGKGHLQGIKNYWKQ-----PVPVHDLMTIPS--- 372
+M++ L + A ++H V+ V+G GHL+G+ N ++ V +L +PS
Sbjct: 210 AFMAARLREEAARPTTSDHRRVLVVIGAGHLKGLCNLLREQQDDPAAKVAELAVLPSKAR 269
Query: 373 -PKPAVSALKVLSSLGVAVA 391
PK + L +L +A A
Sbjct: 270 WPKWVAAGLVLLVFAAIAWA 289
>gi|345021786|ref|ZP_08785399.1| hypothetical protein OTW25_10679 [Ornithinibacillus scapharcae
TW25]
Length = 388
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 118/238 (49%), Gaps = 12/238 (5%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+GTAHVSK S +V+ +I P V +EL R +T + T ++ + K
Sbjct: 15 EIILIGTAHVSKTSAEQVKEVIAAENPDSVCVELDEQRYKSITEGSKWKET--DIFQVIK 72
Query: 204 KKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
K T + S F ++AS I PG E E A + G ++L DR +Q+T R
Sbjct: 73 DKKATLLLMNLAISSFQKRMASQFGINPGQEMIQGIESAKEIGADLVLADRNIQVTFSRI 132
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPS-AEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
W + L K LL + F + +ED L++M DM+ ++ E +++FP L +
Sbjct: 133 WRGIGLKGKFMLLTQVIASIFTNETISED---ELEKMKSQDMIDSMLDEFTESFPRLKKP 189
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAV 377
L+ ERDQY++ + + E VVAV+G H+ GIK K + L +P PK +
Sbjct: 190 LIDERDQYLAQKIKEAPGEK--VVAVLGAAHVPGIKEQIKSDHDLEQLTKLP-PKSKI 244
>gi|431793761|ref|YP_007220666.1| pheromone shutdown-related protein TraB [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430783987|gb|AGA69270.1| pheromone shutdown-related protein TraB [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 390
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 115/235 (48%), Gaps = 12/235 (5%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+GTAHVSK+S V+ +++ +P V +EL R + N T ++ + K
Sbjct: 17 EIILIGTAHVSKQSADLVKEVVETERPDSVCIELDEQRYKAILDGNKWRET--DIFKVIK 74
Query: 204 KKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+K T + S F ++A G E E A + G +++L DR +QIT R
Sbjct: 75 EKKATLLLMNLALSSFQKRLAKEFGTNAGQEMVQGIESAKEIGAELVLADRDIQITFSRI 134
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W + W K KLL + F S + L+++ DML ++++ + +FP L L
Sbjct: 135 WHNVGFWGKCKLLAEIIVSIFDDQSISE--EELEKLKSTDMLNSMLKDFTVSFPKLKTPL 192
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKP 375
+ ERDQY+S + + E +VAV+G H+ GIK ++ HDL + P
Sbjct: 193 IDERDQYLSQKIKEAPGE--KIVAVLGAAHVPGIK---EEIYKDHDLSELTERPP 242
>gi|149198165|ref|ZP_01875212.1| mating response propein to a peptide sex pheromone [Lentisphaera
araneosa HTCC2155]
gi|149138767|gb|EDM27173.1| mating response propein to a peptide sex pheromone [Lentisphaera
araneosa HTCC2155]
Length = 436
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 133/304 (43%), Gaps = 62/304 (20%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVD 200
G +V L+GTAHVSK S +V +I+ +P V +ELC SR Q +K P + +D
Sbjct: 13 GDREVILIGTAHVSKTSAEQVTRVIEEEQPDAVCVELCESRY-----QKIKDPDSWKNMD 67
Query: 201 MWK--KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQ 254
+ K K+ + + LA K+A + I PG E A A + + L DR V+
Sbjct: 68 LVKILKEGKLMLFIINLILASHQKKIAEKMGINPGQEMLNAISSAEENEMSLELIDRDVK 127
Query: 255 ITLRRTWEKMPLWHKIKLLYSFL-----------------------FQA----------- 280
TL RTW M L +KIKLL S L F+
Sbjct: 128 TTLNRTWGLMSLSNKIKLLASMLGTMTIVAWLLSFILFIVHQSSQIFEGHDKIINIVIVA 187
Query: 281 -----FFLPSAED-----LNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSS 330
FFLP + L+++ + DML ++QEM P + + L+ ERD YM
Sbjct: 188 LFLVPFFLPEGNNKEEEVTEESLEKLKEQDMLENLLQEMGDNLPDVKKRLIDERDLYMVK 247
Query: 331 TLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALK-----VLSS 385
L + E +VAVVG GH+ G+ +W + + L +P P K VL
Sbjct: 248 KLQQ--CESKKMVAVVGAGHVPGMLRHWNDEIDLAALEELPQPGILSKCFKYGFPAVLVL 305
Query: 386 LGVA 389
+GVA
Sbjct: 306 VGVA 309
>gi|424699156|ref|ZP_18135392.1| TraB family protein [Enterococcus faecalis ERV62]
gi|402377424|gb|EJV11329.1| TraB family protein [Enterococcus faecalis ERV62]
Length = 384
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 129/248 (52%), Gaps = 17/248 (6%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNLKVPTVGEMVDMW 202
++ LVGTAH+S ES V+ +I+ KP +V LE +R + + P + ++V +
Sbjct: 13 EIILVGTAHISSESAELVKNVIETEKPHIVCLEWDKARYNKYMNPDGW---SDTDIVQVI 69
Query: 203 KKKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K+K T I+Y +A + G+EF A + A K G K+ L DR Q+T +R
Sbjct: 70 KQKRMTVLISSIIYKLIQKHLAKINDSVAGAEFFQAVDSADKVGAKLALVDRDSQLTFKR 129
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
W MPL K L Y+ F + + E MLK ++ + + + +++ +A+P L
Sbjct: 130 FWRVMPLRKKALLPYA--FGSVLEGAEESEEEMLKMLNSENFES-IFEQLQEAYPELWRV 186
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYW--KQPVPVHDLMTIPSPKPAV 377
L+ ERDQYM+ +L+ E +V V+G+ HL+GI+ Q + +L T+P P +
Sbjct: 187 LLVERDQYMADKILR--QEEDKIVVVIGQAHLKGIEKNLTSNQQFNIAELETLP---PKL 241
Query: 378 SALKVLSS 385
+ K+L S
Sbjct: 242 WSTKILES 249
>gi|297792523|ref|XP_002864146.1| hypothetical protein ARALYDRAFT_495273 [Arabidopsis lyrata subsp.
lyrata]
gi|297309981|gb|EFH40405.1| hypothetical protein ARALYDRAFT_495273 [Arabidopsis lyrata subsp.
lyrata]
Length = 404
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 122/244 (50%), Gaps = 36/244 (14%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-------------------VSML 185
++LVGT+H+S ES VE ++ +KP V +ELC SR V
Sbjct: 95 IWLVGTSHISPESASVVERVVRTVKPDNVAVELCRSRKVHFFIQLKLGAGIMYTSSVGGE 154
Query: 186 TPQNLK-----------VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRV 234
QNLK + VG +D+ + +L + F +K++S + G EFR
Sbjct: 155 VDQNLKSGVLSLTGTGFLGAVGRSLDLGGQTALALRLLLAVFSSKLSSVADRPFGDEFRA 214
Query: 235 AFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSF--LFQAFFLPSAEDLNRM 292
A + + + G +++LGDRP++ITL+R W + K L+ + + SA +L
Sbjct: 215 ARKASEEVGAQLVLGDRPIEITLQRAWNSLKWGEKFNLVMAVTRAITSSSGISAAELKE- 273
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLL--KVATEHSSVVAVVGKGH 350
+E D+ + + + +S ++P+L+ L+HERD Y++ +L K +VV V+GKGH
Sbjct: 274 -QETDESNGSLQLYERLSFSYPSLLLPLIHERDTYLAWSLKRSKAVNGCKTVVGVIGKGH 332
Query: 351 LQGI 354
+ G+
Sbjct: 333 MNGV 336
>gi|385790110|ref|YP_005821233.1| traB family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302327776|gb|ADL26977.1| traB family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 391
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 116/229 (50%), Gaps = 20/229 (8%)
Query: 140 GGTCDVY-----------LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTP 187
GG DVY LVGTAH+S+ S V I+ P V +EL R+ S+ P
Sbjct: 3 GGKSDVYRIHTKDNREIVLVGTAHISQVSKDLVHETIEAESPDTVCVELDDGRLKSIQDP 62
Query: 188 QNLKVPTVGEMVDMWKKKHNTF--GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGK 245
K + +++ KK+ T ++ + ++ + + PGSE + A + A
Sbjct: 63 DRWKNTDLRDVIK--KKQLATLIANLVLGSYQKRMGAQTGVKPGSELKEAVDVANSKNIP 120
Query: 246 VILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLV 305
++L DR ++ITLRRTW P + K LL LF + F E L+++ + D L +
Sbjct: 121 LVLADRDIKITLRRTWACTPWYRKFSLLGG-LFASIF-DKTEISEEELQKIKEKDALNSM 178
Query: 306 IQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGI 354
+QE K FP + + L+ ERDQ+++S + + +VAV+G GHL+GI
Sbjct: 179 MQEFGKTFPEVKQVLIDERDQFLASKIKN--APGNKIVAVIGAGHLRGI 225
>gi|386859647|ref|YP_006272353.1| Pheromone shutdown protein [Borrelia crocidurae str. Achema]
gi|384934528|gb|AFI31201.1| Pheromone shutdown protein [Borrelia crocidurae str. Achema]
Length = 371
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 129/241 (53%), Gaps = 25/241 (10%)
Query: 154 SKESCREVEAIIDFLKPQVVFLELCSSRVSML--TPQNLKVPTVGEMVDMWK--KKHNTF 209
K+S ++ +ID LKP + +EL +R + T +N K + D++K K+ F
Sbjct: 3 QKKSSQDTANLIDILKPNFIAVELDEARYHAILQTDENEKWRNL----DIYKVIKQGKAF 58
Query: 210 ----GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
I+ S F K+A I PG E + A +A ++ +IL DR V+ TL+R W +P
Sbjct: 59 LLIVQIILSNFQKKLAKEQGISPGEEMKTAILKAKEHNIPLILADRKVETTLKRAWNCVP 118
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
++ K K++ S LF + ED LKE D L+ +++E++K PT+ + L+ ERD
Sbjct: 119 IFEKTKIISS-LFSFSDIKVTEDEIEKLKEQ---DALSNIMEELAKEIPTVKKVLIDERD 174
Query: 326 QYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ------PVPVHDLMTIPSPKPAVSA 379
++++S +L+ + ++ AVVG GH++GI K+ + + +L TIP ++S
Sbjct: 175 EFIASKILEGS---GTIFAVVGAGHVKGIIENLKEIQDTKKIINIEELNTIPKNNFSISK 231
Query: 380 L 380
L
Sbjct: 232 L 232
>gi|386713388|ref|YP_006179711.1| TraB family protein [Halobacillus halophilus DSM 2266]
gi|384072944|emb|CCG44435.1| TraB family protein [Halobacillus halophilus DSM 2266]
Length = 390
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 5/210 (2%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKKK 205
L+GTAHVSK+S +V+ +ID +P V +EL R S++ K + ++ K
Sbjct: 20 LIGTAHVSKQSAEQVKQVIDEQQPDAVCVELDEQRYQSIVNGDAWKDTDIFAVIKQKKAS 79
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S F ++A I G E E A ++ +++L DR +Q+T R W +
Sbjct: 80 LLLMNLAISSFQKRMAKQFGIQAGQEMIQGIESAKEHDAELVLADRNIQVTFARIWGNIG 139
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
K KLL S ++ F + + L++M DML +++++++ FP L + L+ ERD
Sbjct: 140 FGGKAKLLMSIIYSIFSNDTISEAE--LEKMKKQDMLDGMLKDLTENFPKLKKPLIDERD 197
Query: 326 QYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
QY++ + + VVAV+G H+ GIK
Sbjct: 198 QYLAQKIKDAPGK--KVVAVLGAAHVPGIK 225
>gi|389808274|ref|ZP_10204684.1| pheromone shutdown-related protein TraB [Rhodanobacter thiooxydans
LCS2]
gi|388443152|gb|EIL99311.1| pheromone shutdown-related protein TraB [Rhodanobacter thiooxydans
LCS2]
Length = 411
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 126/266 (47%), Gaps = 12/266 (4%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKKK 205
++GTAHVS+ S VEA+++ + V +ELC SR SM P+ K + +++ K
Sbjct: 32 VLGTAHVSRSSMEAVEALLEHERFDAVAVELCDSRAQSMRDPEAFKQMDLFKVIRQGKAG 91
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
++ S F ++A I PG+E + A + A G + L DR V TL+R W +
Sbjct: 92 MVAASLVLSTFQKRLADQSGIQPGAEMKAAMDGAAARGLPLWLIDREVGTTLKRAWRSVG 151
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHER 324
W + LL L F ED+ + ++++ D+L E + L ++L+ ER
Sbjct: 152 FWQRFGLLGGLLASVF---EREDIEQSEIEKLKQGDLLESAFSEFASGSKPLYDSLIGER 208
Query: 325 DQYMSSTLLKVA-----TEHSSVVAVVGKGHLQGIKNYWK--QPVPVHDLMTIPSPKPAV 377
D +M++ L + A E+ V+ V+G GHL+G+ + Q P + + P P
Sbjct: 209 DAFMAARLREEAARTASAENRRVLVVIGAGHLKGLCALLREQQDDPTAKVAELAVPPPKA 268
Query: 378 SALKVLSSLGVAVAGVAIISGIYINC 403
K L++ V + AI + N
Sbjct: 269 RWPKWLAAGLVLLVFAAIAWAFHRNA 294
>gi|307274641|ref|ZP_07555817.1| TraB family protein [Enterococcus faecalis TX2134]
gi|306508679|gb|EFM77773.1| TraB family protein [Enterococcus faecalis TX2134]
Length = 384
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 129/248 (52%), Gaps = 17/248 (6%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNLKVPTVGEMVDMW 202
++ LVGTAH+S ES V+ +I+ KP +V LE +R + + P + ++V +
Sbjct: 13 EIILVGTAHISSESAELVKNVIETEKPHIVCLEWDKARYNKYMNPDGW---SDTDIVQVI 69
Query: 203 KKKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K+K T I+Y +A + G+EF A + A K G K+ L DR Q+T +R
Sbjct: 70 KQKRMTVLISSIIYKLIQKHLAKINDSVAGAEFFQAVDSADKVGAKLALVDRDSQLTFKR 129
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
W MPL K L Y+ F + + E MLK ++ + + + +++ +A+P L
Sbjct: 130 FWRVMPLRKKALLPYA--FGSVLEGAEESEEEMLKLLNSENFES-IFEQLQEAYPELWRV 186
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYW--KQPVPVHDLMTIPSPKPAV 377
L+ ERDQYM+ +L+ E +V V+G+ HL+GI+ Q + +L T+P P +
Sbjct: 187 LLVERDQYMADKILR--QEEDKIVVVIGQAHLKGIEKNLTSNQQFNIAELETLP---PKL 241
Query: 378 SALKVLSS 385
+ K+L S
Sbjct: 242 WSTKILES 249
>gi|168063356|ref|XP_001783638.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664828|gb|EDQ51533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 23/233 (9%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDM 201
VYLVGTAHVS +S +V +I ++P V +ELC R L PQ + ++ ++
Sbjct: 65 VYLVGTAHVSVKSADQVREVIQRVRPDRVAVELCQERAKNLMSDNPQRKGKTPLQQLQEL 124
Query: 202 WKKKHNTFGILYSWFLA---KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
+ L +++ ++ + + PG EFR+A EEA + +++ D+ V T++
Sbjct: 125 FNLPGGLGQKLIGFWMKSMYELIRNTGVEPGKEFRIAMEEAQRLNAEILYIDQNVHETIK 184
Query: 259 RTWEKMPLWHKIKLLY----------SFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQE 308
R + + +W +K+L SF+ E + R+ + +M+T
Sbjct: 185 RLRDVITIWDVLKMLKNPNQHLDTYPSFMKDMEHRDFEETVERVKTRENVREMMTW---- 240
Query: 309 MSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP 361
M ++FP L++ +VHERDQ M LL+ +VV VVG H+ GI+ WK+
Sbjct: 241 MEQSFPALVKVMVHERDQLMVKRLLEC---EGTVVGVVGMAHMDGIERLWKEA 290
>gi|359393988|ref|ZP_09187041.1| hypothetical protein KUC_0630 [Halomonas boliviensis LC1]
gi|357971235|gb|EHJ93680.1| hypothetical protein KUC_0630 [Halomonas boliviensis LC1]
Length = 429
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 7/228 (3%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMV 199
G L+GTAHVS ES +V ++D V +ELC +R SM P + + ++
Sbjct: 44 GDTRYTLLGTAHVSAESADDVRRLMDSGAFDAVAIELCDARHHSMSNPDAMGEQDLFQVF 103
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K + F ++A I PG+E R A EEA + ++L DR V +TL+R
Sbjct: 104 KEGKAGMVAASLALGAFQQRIADQSGIQPGAEMRAAVEEASRLQLPLLLVDRDVGVTLKR 163
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLME 318
+ +P W + L + S +D+++ ++++ + DML E + L
Sbjct: 164 IYRNVPWWQRFSLFSGLIGSVL---SRQDVSKEDIEKLKEGDMLEATFSEFAAESEALYT 220
Query: 319 TLVHERDQYMSSTLLKVA--TEHSSVVAVVGKGHLQGIKNYWKQPVPV 364
L+ ERD+YM+ L + A + +V+ V+G GHL+G + + P+P
Sbjct: 221 PLIRERDRYMALRLAEDAPPGRYQNVLVVLGAGHLKGTGEHLETPLPA 268
>gi|405970710|gb|EKC35591.1| TraB domain-containing protein [Crassostrea gigas]
Length = 377
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 135/280 (48%), Gaps = 48/280 (17%)
Query: 84 DPLSESIVSLGDEVRDESSDRDET------------NGAVPVPEETKKVLPEELPRSVVI 131
DPLSE + DE S +ET + P P ++ P+ LP + +
Sbjct: 38 DPLSE--------IEDEWSVHNETFETVSGEESDVEDNVEPYPVRQREENPD-LPETCTV 88
Query: 132 LTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLK 191
L T +G VY+VGTAH S ES +V +I +P +V +ELC R+ +L
Sbjct: 89 L---ETPQGSK--VYVVGTAHFSTESLNDVTRVIQATQPDIVSVELCMDRIKILQLDEDT 143
Query: 192 VPTVGEMVDMWKKKHNT---------FGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKY 242
V + ++ K K N F ++ A++ L + PG EFR A++EA K
Sbjct: 144 VLREAKDMNFQKVKANIAQNGLVQGLFNVMLLNISARLTKELGMAPGGEFRQAYKEAKKI 203
Query: 243 -GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLP---SAEDLNRMLKEMDD 298
K+ LGDRP+ ITL+R + + W +K F++ A+ S ED+ + +
Sbjct: 204 PRCKLHLGDRPIHITLQRAFALLSCWQLVK----FIWHAWNFDEPISKEDVEKFKGK--- 256
Query: 299 VDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE 338
D+L ++ EM+ FP L + ++ ERD +++ + LK+A E
Sbjct: 257 -DLLEQLLAEMTTEFPGLSQVVIEERDTFLAHS-LKMAAE 294
>gi|350552893|ref|ZP_08922084.1| TraB family protein [Thiorhodospira sibirica ATCC 700588]
gi|349792711|gb|EGZ46562.1| TraB family protein [Thiorhodospira sibirica ATCC 700588]
Length = 402
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 122/240 (50%), Gaps = 12/240 (5%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPTVGEMVDM 201
+ ++GTAHVSK S V+ ++D V +ELC SR S++ P ++ + +++
Sbjct: 21 TQITVLGTAHVSKTSAEVVQQMLDSGAYDAVAVELCPSRHQSLVKPDDMARMDLFQILRE 80
Query: 202 WKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTW 261
K + + ++A I PG+E R+A + A ++ V+L DR + TL+R++
Sbjct: 81 GKVTMIAASLALGAYQQRLAEQFGIEPGAEMRMALQGAREHQLPVLLIDRELGTTLKRSY 140
Query: 262 EKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETL 320
+P W + L + L S E ++ ++ + DML + + L E L
Sbjct: 141 RNVPWWKRFNLFAGLMAS---LVSREKISESEIEALKQGDMLETTFAQFADDSRELYEPL 197
Query: 321 VHERDQYMSSTLLKVA--TEHSSVVAVVGKGHLQGIKNYWKQP--VPV---HDLMTIPSP 373
+ ERD+YM++ L +A ++ ++AVVG GHLQGI+ + + P PV D+ +P P
Sbjct: 198 IAERDRYMAARLQSIARDGDYRHILAVVGAGHLQGIEAHLRTPSSAPVEVIRDMEQVPPP 257
>gi|320353006|ref|YP_004194345.1| TraB family protein [Desulfobulbus propionicus DSM 2032]
gi|320121508|gb|ADW17054.1| TraB family protein [Desulfobulbus propionicus DSM 2032]
Length = 398
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 110/217 (50%), Gaps = 15/217 (6%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML----TPQNLKVPTVGEMVD 200
+ L+GTAH+S++S V+ +I +P V +EL R + L T +NL V V
Sbjct: 25 ILLIGTAHISQQSTDLVKQVIVQEQPDAVCIELDEKRHAALAKRDTWENLDVKQV----- 79
Query: 201 MWKKKHNTF--GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
+ K+ T ++ + + K+ L I PG+E A + A + G ++L DR V+ITLR
Sbjct: 80 VRNKQLATLMVNLILAAYQKKLGGQLGIMPGTELLAASQTAEQLGIPIVLCDRDVRITLR 139
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R W K LL + L + F + D L M D+L+ +I EM A P E
Sbjct: 140 RAWRATSFCKKGYLLAT-LLTSLFDKTVLD-EEQLTAMRRKDVLSELINEMGAALPHTKE 197
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
L+ ERD YM+ + + A +VAVVG GH +GI+
Sbjct: 198 VLIDERDIYMAEKIKQTAGRR--LVAVVGAGHTEGIR 232
>gi|42573660|ref|NP_974926.1| TraB family protein [Arabidopsis thaliana]
gi|10177738|dbj|BAB11051.1| unnamed protein product [Arabidopsis thaliana]
gi|332008777|gb|AED96160.1| TraB family protein [Arabidopsis thaliana]
Length = 402
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 36/244 (14%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-------------------VSML 185
++LVGT+H+S ES VE ++ +KP V +ELC SR V
Sbjct: 94 IWLVGTSHISPESASIVERVVRTVKPDNVAVELCRSRKVQFFIQTKFGAGIMYTSSVGGE 153
Query: 186 TPQNLK-----------VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRV 234
QNLK + VG +D+ + +L + F +K++S + G EFR
Sbjct: 154 VDQNLKSGELSLTGTGFLGAVGRSLDLGGQTALALRLLLAVFSSKLSSVADRPFGDEFRA 213
Query: 235 AFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSF--LFQAFFLPSAEDLNRM 292
A + + + G +++LGDRP++ITL+R W + K L+ + + + SA +L
Sbjct: 214 ARKASEEVGAQLVLGDRPIEITLQRAWNSLKWGEKFNLVMAVTRVITSSSGISAAELKE- 272
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLL--KVATEHSSVVAVVGKGH 350
+E D+ + + +S ++P L+ L+HERD Y++ +L K +VV V+GKGH
Sbjct: 273 -QETDENSGSLQLYERLSFSYPALLMPLIHERDTYLAWSLKRSKAVNGCKTVVGVIGKGH 331
Query: 351 LQGI 354
+ G+
Sbjct: 332 MNGV 335
>gi|422696332|ref|ZP_16754295.1| TraB family protein [Enterococcus faecalis TX4244]
gi|315146273|gb|EFT90289.1| TraB family protein [Enterococcus faecalis TX4244]
Length = 386
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 125/260 (48%), Gaps = 11/260 (4%)
Query: 146 YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKK 204
YLVGT H+SKES V+ +I+ ++P V +EL R T P+ + +++ K
Sbjct: 19 YLVGTNHISKESAELVKNVINEVRPGCVCVELDQKRYQKYTSPEEWAKTDIIKIIKQNKL 78
Query: 205 KHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKM 264
I+Y K+A E A E A G + L DR +Q+T +R W +
Sbjct: 79 VMLFSNIVYGVLQRKLAKEKGTIQAGELIQALESAENVGADIQLIDRDIQVTFKRMWRHL 138
Query: 265 PLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHER 324
K KL+ +F F F E L L E D D V ++SK FPT+ + ++ ER
Sbjct: 139 SFTQKPKLIMTF-FSEFDDVETERLEDFL-ESDSFDN---VFIQLSKKFPTIYDDMITER 193
Query: 325 DQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP--VPVHDLMTIPSPKPAVSALKV 382
D+ M + L K +++ V VVGK H+ GIK K+ + +L +IPS K + ++
Sbjct: 194 DKVMVTNLQK--SKYDVNVVVVGKAHINGIKEKLKEEKNYDISELTSIPSKKLSSKLIEF 251
Query: 383 LSSLGVA-VAGVAIISGIYI 401
+ L + + ++ SG+ +
Sbjct: 252 IFPLTIILLLAISFFSGVQV 271
>gi|220933850|ref|YP_002512749.1| pheromone shutdown protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995160|gb|ACL71762.1| pheromone shutdown protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 400
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 8/272 (2%)
Query: 137 TAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTV 195
T + G + ++GTAHVS+ S V+ +I V +ELC SR + L P +L +
Sbjct: 12 TTQVGDTRITVLGTAHVSRASADAVQELIRSRDFDAVAVELCPSRHNALVRPDDLARMDL 71
Query: 196 GEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQI 255
+++ K T + + ++A I PG+E RVA EA V+L DR V
Sbjct: 72 FQVLRQGKVPMVTASLALGAYQQRLAEQFGIEPGAEMRVAIHEAQADHLPVLLIDREVGT 131
Query: 256 TLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPT 315
TL+R + +P W + L L A + + ++ + + D+L + ++ +
Sbjct: 132 TLKRCYRNVPWWQRFSLFGGLL--AGVMSKEKVSEEEIERLKEGDILESTFTQFAQESQS 189
Query: 316 LMETLVHERDQYMSSTLLKVATE--HSSVVAVVGKGHLQGIKNYWKQPV---PVHDLMTI 370
L E L+ ERD+YM++ L + A+ + ++AVVG GH++GI+ + P P + +
Sbjct: 190 LYEPLIAERDRYMAARLRQEASRGGYRHILAVVGAGHMKGIQADLQAPCTDSPQAVIEAL 249
Query: 371 PSPKPAVSALKVLSSLGVAVAGVAIISGIYIN 402
PA KVL + VA+ G Y N
Sbjct: 250 DREPPAARWPKVLPWVVVALILTGFAIGFYRN 281
>gi|352081966|ref|ZP_08952789.1| TraB family protein [Rhodanobacter sp. 2APBS1]
gi|351682104|gb|EHA65210.1| TraB family protein [Rhodanobacter sp. 2APBS1]
Length = 412
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 13/239 (5%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKKK 205
++GTAHVS+ S VEA++D V +ELC SR SM P+ K + +++ K
Sbjct: 32 VLGTAHVSRSSMEAVEALLDHEHFDAVAVELCDSRAQSMRDPEAFKQMDLFKVIRQGKAG 91
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
++ S F ++A I PG+E + A + A + G + L DR V TL+R W +
Sbjct: 92 MVAASLVLSTFQKRLADQSGIQPGAEMKAAMDGAERRGLPLWLIDREVGTTLKRAWRSVG 151
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
W + LL L F E ++++ D+L E + + L ++L+ ERD
Sbjct: 152 FWQRFGLLGGLLASVFEREEIEQGE--IEKLKQGDLLESAFSEFASSSKPLYDSLIGERD 209
Query: 326 QYMSSTLLKVA------TEHSSVVAVVGKGHLQGIKNYWKQ----PVPVHDLMTIPSPK 374
+M++ L + A TEH V+ V+G GHL+G+ ++ P + +P PK
Sbjct: 210 AFMAARLREEAARPATTTEHRRVLVVIGAGHLKGLCTLLREQQDDPAAKVAELAVPPPK 268
>gi|398334468|ref|ZP_10519173.1| pheromone shutdown protein [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 408
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 136/280 (48%), Gaps = 22/280 (7%)
Query: 114 PEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVV 173
PE KKV E P + L G V ++GTAH+S++S EV+ II KP V
Sbjct: 12 PERKKKVSGSE-PIETIKL--------GKATVTILGTAHISQKSIDEVQRIIREEKPDTV 62
Query: 174 FLELCSSRVSMLTP----QNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPG 229
+ELC+SR+ + + L + V + M+ + + L K + I PG
Sbjct: 63 CVELCNSRMRSVKDSEHWKKLDIFKVFKERKMYLLLSSLILSAFQKKLGKGS----IRPG 118
Query: 230 SEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDL 289
E R+A E K G K++ DR V TL+R W + ++++ LL + L F ED+
Sbjct: 119 DEMRMAIFEGEKIGAKIVPIDREVSTTLKRAWWNIGFFNRMLLLSALLTSLFV---KEDI 175
Query: 290 NR-MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGK 348
+ ++EM D+L + ++ K + ++ ++ ERD Y++ + A E + AVVG
Sbjct: 176 SEEKIEEMKSEDVLKDLFSQLPKRYESIKNVIIDERDSYLAQKIRDSAKEGKKIFAVVGA 235
Query: 349 GHLQGIKNYWKQPVPVHDLMTIPSPKPAVSALKVLSSLGV 388
GHLQGI N ++ + L +P K A+ K L G+
Sbjct: 236 GHLQGIVNQIQEERDIAPLDHLPQ-KTALDRWKGLLVPGI 274
>gi|95928793|ref|ZP_01311539.1| TraB family protein [Desulfuromonas acetoxidans DSM 684]
gi|95135138|gb|EAT16791.1| TraB family protein [Desulfuromonas acetoxidans DSM 684]
Length = 405
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 127/261 (48%), Gaps = 11/261 (4%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN-LKVPTVGEMVDMW 202
++ L+GTAH+SKES V I+ +P V +EL R L +N + + ++V
Sbjct: 32 EIILIGTAHISKESVATVTRAIEQEQPDCVCVELDEQRYQTLKDRNRWEKLNILQVVKNG 91
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
+ + + F ++ + PG E A + A + +V L DR +++TL R W
Sbjct: 92 QVPFLMANLALASFQKRMGLQTGVKPGEELAAAAQTAEDHDIRVALVDRNIRVTLLRAWR 151
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
K LW K+ L+ + LF F D L ++ D L+ +++EM + P LV
Sbjct: 152 KTGLWKKMNLVAT-LFAGMFEKQELD-EEELSQLRQTDSLSSMLEEMGELLPAAKTILVD 209
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP---VPVHDLMTIPSPKPAVSA 379
ERD +M+ +L+ A E + VAVVG H+ GIK P + ++ TIP PK A+S
Sbjct: 210 ERDAWMTYHILQAAGEKT--VAVVGAAHVPGIKRCLDDPPHDDAIGEMGTIP-PKSALS- 265
Query: 380 LKVLSSLGVAVAGVAIISGIY 400
K + + A+ + I G +
Sbjct: 266 -KAIPWIIPAIVALMFIVGFF 285
>gi|402297752|ref|ZP_10817502.1| hypothetical protein BalcAV_02743 [Bacillus alcalophilus ATCC
27647]
gi|401727010|gb|EJT00213.1| hypothetical protein BalcAV_02743 [Bacillus alcalophilus ATCC
27647]
Length = 388
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMW 202
++ L+GTAHVSK+S +V+ +I+ +P V +EL R S++ K + +++
Sbjct: 15 EIILIGTAHVSKQSAEQVKEVIETERPDSVCIELDEQRYQSIMDGNKWKDMDIFKVIKEK 74
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K + S F ++A + PG E + A + G +++L DR +Q T R W
Sbjct: 75 KATLLLMNLAISSFQNRMADQFGVKPGQEMIQGIDSAKETGAELVLADRNIQTTFARIWH 134
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMSKAFPTLMETLV 321
++ K L+Y F S E L +++M DML ++++++++FP L + L+
Sbjct: 135 QIGFKGKADLMYQITGSIF---SKETLTEEEMEKMKSQDMLNAMLKDLTESFPRLKKPLI 191
Query: 322 HERDQYMSSTLLKVATEHSSVVAVVGKGHLQGI 354
ERDQY++ + K + VVAV+G H+ GI
Sbjct: 192 DERDQYLAQHIKKAPGD--KVVAVLGAAHVPGI 222
>gi|307111918|gb|EFN60152.1| hypothetical protein CHLNCDRAFT_133581 [Chlorella variabilis]
Length = 291
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 21/247 (8%)
Query: 138 AEGG--TCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTV 195
AE G ++LVGTAHVSK S EV +I +KP V +ELC R + L V
Sbjct: 52 AEAGRSAAAIFLVGTAHVSKRSSEEVRDMIRLVKPASVMVELCPQRAARLRSGAGDHDFV 111
Query: 196 GEMVDMWKKKHNTFG---------ILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKV 246
+M+ + + G ++Y KV L + PG+EF+VA +EA + G +V
Sbjct: 112 KQMLASFTSSGGSLGQRLVKVGLPMMYRGL--KV---LGMDPGAEFKVALQEADRIGARV 166
Query: 247 ILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQ--AFFLPSAEDLNRMLKEMDDVDMLTL 304
+ GDR VQ TL+R E + ++ L F Q + L S +++ M ++
Sbjct: 167 VHGDRDVQRTLQRLSETVDWQDLLRSLLDFFTQQGSSSLESQARQGALVEAMKTRAVVRD 226
Query: 305 VIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPV 364
+ M + P + L+ ERD++M L ++ VV V+G HL G++ W+ +
Sbjct: 227 MCTYMRQVNPRMAAALIDERDEHMVGELSRL---EGRVVGVLGLAHLDGMERRWEARMYS 283
Query: 365 HDLMTIP 371
+ P
Sbjct: 284 RQALAAP 290
>gi|26342523|dbj|BAC25112.1| unnamed protein product [Mus musculus]
Length = 320
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 127/260 (48%), Gaps = 21/260 (8%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 37 SDVDAFNLLLEMKLKRRRERPN-LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDV 90
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWF 216
I ++P VV +ELC RVSML + + V + K +++ L
Sbjct: 91 VKTIREVQPDVVVVELCQYRVSMLKMDERTLLREAKEVSLEKLQQAVRQNGLMSGLMQML 150
Query: 217 LAKVASH----LEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIK 271
L KV++H L + PG EFR AF+EA K K LGDR + +T + W K+K
Sbjct: 151 LLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRAIPVTFIEGIAALSFWQKVK 210
Query: 272 LLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSST 331
L + + + S +D+ R ++ D+L ++ EM FP L T+V ERD Y++
Sbjct: 211 LAWGLCSLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYM 265
Query: 332 LLKVATEHSSVVAVVGKGHL 351
L + A A G G L
Sbjct: 266 LRQAARRLELPRASDGDGKL 285
>gi|389736460|ref|ZP_10190010.1| pheromone shutdown-related protein TraB [Rhodanobacter sp. 115]
gi|388439339|gb|EIL95927.1| pheromone shutdown-related protein TraB [Rhodanobacter sp. 115]
Length = 410
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 10/215 (4%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKKK 205
++GTAHVS+ S VEA+++ V +ELC SR M P+ K + +++ K
Sbjct: 31 VLGTAHVSRSSMEAVEALLEHEHFDAVAVELCDSRAQGMRNPEAFKQMDLFQVIRQGKTG 90
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
++ S F ++A I PG+E + A + A + G + L DR V TL+R W +
Sbjct: 91 MVAASLVLSSFQKRLADQYGIEPGAEMKAAMDGAEQRGLPLWLIDREVGTTLKRAWHSVG 150
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHER 324
W + LL L F E+++ ++++ DML E + L +L+ ER
Sbjct: 151 FWQRFGLLGGMLASVF---ERENIDEGEIEKLKQGDMLESAFSEFASESEPLYRSLIAER 207
Query: 325 DQYMSSTL-----LKVATEHSSVVAVVGKGHLQGI 354
D YM++ L L TE V+ V+G GHL+G+
Sbjct: 208 DAYMAARLREEATLSATTEPRRVLVVIGAGHLKGL 242
>gi|335424261|ref|ZP_08553272.1| pheromone shutdown protein [Salinisphaera shabanensis E1L3A]
gi|334889912|gb|EGM28196.1| pheromone shutdown protein [Salinisphaera shabanensis E1L3A]
Length = 403
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 4/212 (1%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS+ S EV+ I+ V +ELC +R + LT L+ + +++ K
Sbjct: 28 LLGTAHVSRASAEEVQNEIETGAYDTVAIELCDARHAALTRAGELEQMDLFQVLRQGKAG 87
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + ++A I PG+E R A ++L DR + ITL+R + ++P
Sbjct: 88 MVAANLALGAYQQRLADQFGIEPGAEMRAAITSCAAADLPLVLVDRNIGITLKRVYRRIP 147
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
W ++ L + E+ + ++ + + DML E + T+ ETL+ ERD
Sbjct: 148 WWQRMSTLGALFASLLSREKIEESD--IERLKEGDMLESTFNEFAAESATMHETLIDERD 205
Query: 326 QYMSSTLLKVATEHSSVVAVVGKGHLQGIKNY 357
+YM++ LLK ++V VVG GHL+G+ Y
Sbjct: 206 RYMAAQLLKRTPSRHTLV-VVGAGHLKGLARY 236
>gi|21702227|emb|CAD35306.1| TraB protein [Enterococcus faecalis]
Length = 384
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 123/245 (50%), Gaps = 11/245 (4%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNLKVPTVGEMVDMW 202
++ LVGT+H+SKES V+ +I+ P +V LE +R + + P + +++
Sbjct: 13 EIVLVGTSHISKESAELVKEVIEKENPDIVCLEWDKTRYNKYMNPDEWSDTDIVQVIKQK 72
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K ++YS +A + PG+EF A A K G K+ L DR Q+T +R W
Sbjct: 73 KLIVLISSVIYSLIQKHLAKINDSVPGAEFFQAVNSAEKIGAKLALVDRDSQVTFKRFWR 132
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
+PL K ++F L AED +K++ + + + +++ + +P L E+ +
Sbjct: 133 LIPLRKKALFPHAF---GKVLEGAEDSKEEMKKLLNSENFEPIFEQLQQTYPELWESFLI 189
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ--PVPVHDLMTIPSPKPAVSAL 380
ERD YMS+ +L E +V V+G+ HL G++ K+ + +L +P P + +
Sbjct: 190 ERDLYMSTKILN--EEGEKIVVVIGQAHLNGVEKNIKENRKANIEELDGLP---PKLWST 244
Query: 381 KVLSS 385
+VL S
Sbjct: 245 RVLES 249
>gi|421098986|ref|ZP_15559647.1| TraB family protein [Leptospira borgpetersenii str. 200901122]
gi|410797978|gb|EKS00077.1| TraB family protein [Leptospira borgpetersenii str. 200901122]
Length = 439
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 13/226 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 61 GKTIVTILGTAHISQKSIDEVQKIIRKEKPDTVCVELCNSRMRSLKDNEHWKKLDIFKVF 120
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A E K G K++ DR + T
Sbjct: 121 KERKMYLLLSSLILSAFQKKLGKGS----IRPGDEMRMAISEGEKIGAKIVPIDREISTT 176
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + ++++ ++ L ED++ ++EM D+L + ++ K + +
Sbjct: 177 LKRAWWNIGIFNR---MFLLSALLASLFVKEDVSEEKIEEMKSEDVLKDLFSQLPKRYES 233
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNY-WKQ 360
+ ++ ERD Y++ + A E + AVVG GHLQGI N+ W++
Sbjct: 234 IKNVIIDERDSYLAQKIRDTAKEGKKIFAVVGAGHLQGIMNHVWEE 279
>gi|374587878|ref|ZP_09660968.1| TraB family protein [Leptonema illini DSM 21528]
gi|373872566|gb|EHQ04562.1| TraB family protein [Leptonema illini DSM 21528]
Length = 442
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 22/255 (8%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPTVGEMV 199
GT +V+++GTAH+S+ S +VE I KP VV +ELC R ++L P K + +++
Sbjct: 37 GTDEVFVLGTAHISRSSVEDVEQAIAKWKPDVVCVELCRPRHEALLDPDRWKKMDLTKVI 96
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K ++ S F K+ + PG E R A E A + G +++ DR ++ TL R
Sbjct: 97 REKKLALLASNLILSSFQKKIGDQTGVRPGEEMRRASELAREKGLELVFIDREIRTTLSR 156
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
W K+ + K+ S L E ++EM D+L + + + + ++ E
Sbjct: 157 AWAKVGFFS--KMWLSSYLLTSLLVKEEVSAEEVEEMKQKDVLEDLFSNLPRQYQSVKEV 214
Query: 320 LVHERDQYMSSTLLKVATEHSSV-----------------VAVVGKGHLQGIKNYWKQ-- 360
++ ERD Y++ +VA H+ V ++VVG GHL GI K+
Sbjct: 215 ILDERDAYLAENTRRVALSHAEVERHDHETKSSSKKKRRILSVVGAGHLPGILRTLKENR 274
Query: 361 PVPVHDLMTIPSPKP 375
PV + +L TIP P+P
Sbjct: 275 PVDLVELRTIPKPRP 289
>gi|295112580|emb|CBL31217.1| pheromone shutdown-related protein TraB [Enterococcus sp. 7L76]
Length = 384
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 123/245 (50%), Gaps = 11/245 (4%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNLKVPTVGEMVDMW 202
++ LVGT+H+SKES V+ +I+ P +V LE +R + + P + +++
Sbjct: 13 EIVLVGTSHISKESAELVKEVIEKENPDIVCLEWDKTRYNKYMNPDEWSDTDIVQVIKQK 72
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K ++YS +A + PG+EF A A K G K+ L DR QIT +R W
Sbjct: 73 KLIVLISSVIYSLIQKHLAKINDSVPGAEFFQAVNSAEKSGAKLALVDRDSQITFKRFWR 132
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
+PL K ++F L AED +K++ + + + +++ + +P L E+ +
Sbjct: 133 LIPLRKKALFPHAF---GKVLEGAEDSKEEMKKLLNSENFEPIFEQLQQTYPELWESFLI 189
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ--PVPVHDLMTIPSPKPAVSAL 380
ERD YMS+ +L E +V ++G+ HL G++ K+ + +L +P P + +
Sbjct: 190 ERDLYMSTKILN--EEGKKIVVIIGQAHLNGVEKNIKENRKANIEELDGLP---PKLWST 244
Query: 381 KVLSS 385
+VL S
Sbjct: 245 RVLES 249
>gi|426227230|ref|XP_004007724.1| PREDICTED: traB domain-containing protein [Ovis aries]
Length = 310
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 113/232 (48%), Gaps = 12/232 (5%)
Query: 102 SDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREV 161
SD D N + + + ++ P LPR+V L AE G+ VY+VGTAH S +S R+V
Sbjct: 38 SDVDAFNLLLEMKLKRRRERPN-LPRTVTELV----AEDGS-RVYVVGTAHFSDDSKRDV 91
Query: 162 EAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVA 221
I ++P VV +ELC RVSML + + + + K + A +
Sbjct: 92 VKPIWEVQPDVVVVELCQYRVSMLKMDERTLLREAKEISLEKLQQAVRQXXXXXXSAHIT 151
Query: 222 SHLEIFPGSEFRVAFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQA 280
L + PG E R AF+EA + K LGDRP+ +T +R + LW K+KL + F +
Sbjct: 152 EQLGVAPGGEVRGAFKEASRLPFCKFHLGDRPIPVTFKRAIAALSLWQKVKLAWGLCFLS 211
Query: 281 FFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL 332
P K+ D+L ++ EM FP L T+V ERD Y++ L
Sbjct: 212 D--PIXXXXXXRCKQK---DLLEQMMAEMVGEFPDLHRTIVSERDVYLTYML 258
>gi|307543959|ref|YP_003896438.1| pheromone shutdown protein [Halomonas elongata DSM 2581]
gi|307215983|emb|CBV41253.1| pheromone shutdown protein [Halomonas elongata DSM 2581]
Length = 410
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 108/228 (47%), Gaps = 9/228 (3%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPTVGEMV 199
G L+GTAHVS +S EV +I + V +ELC SR ++ P L + ++
Sbjct: 26 GETRYTLLGTAHVSAQSATEVRDLIASGEFDAVAIELCDSRHQNLANPDALGEQDLFQIF 85
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K + F +VA I PG+E R A E A + + L DR + ITL+R
Sbjct: 86 RQGKAGMVAASLALGAFQQRVAEQSGIEPGAEMRAALEGARAHSLPLELIDRDIGITLKR 145
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLP--SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLM 317
+ +P W + L L SAED+ R LKE D+L +E + +L
Sbjct: 146 IYHNVPWWQRFSLFSGLLGGVLSRQDVSAEDIER-LKEG---DVLESTFREFATQSESLY 201
Query: 318 ETLVHERDQYMSSTLLKVA--TEHSSVVAVVGKGHLQGIKNYWKQPVP 363
L+ ERD+YM+ L + + V+ V+G GHLQG+ + + P+P
Sbjct: 202 TPLISERDRYMALRLAERCPPGRYRHVLVVIGAGHLQGMAEHLEAPLP 249
>gi|313218783|emb|CBY42591.1| unnamed protein product [Oikopleura dioica]
Length = 347
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 14/201 (6%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVP-----TVGEMV 199
+Y+VGTAH+S++S +V IID +KP V +ELC+ R ++ + T ++V
Sbjct: 144 IYVVGTAHLSRDSNHQVLEIIDRVKPDRVMVELCNERQGLMYMSEKAIMDQPDITWSDLV 203
Query: 200 DMWKKKHNTFGILYSWFLAKV--ASH-LEIFPGSEFRVAFEEAMKY-GGKVILGDRPVQI 255
DM K K ++ + A H L+ PG EFR+A ++ K KV+LGDR + +
Sbjct: 204 DMAKVKGIGAAVVQLSLMGATDHAKHELQTIPGGEFRLAKQQCDKVPNCKVVLGDRRMSV 263
Query: 256 TLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPT 315
T RR M W KI+ + ++ + ++ E ++EM D L ++ EM FP+
Sbjct: 264 TFRRLTAAMSTWEKIRFVAGTIWDSIWVKEGE-----IEEMKQEDTLEKLMDEMKVDFPS 318
Query: 316 LMETLVHERDQYMSSTLLKVA 336
++ ERD Y++ L A
Sbjct: 319 AARVILDERDTYLTGMLQATA 339
>gi|256959393|ref|ZP_05563564.1| PrgY [Enterococcus faecalis DS5]
gi|422723910|ref|ZP_16780411.1| TraB family protein [Enterococcus faecalis TX2137]
gi|256949889|gb|EEU66521.1| PrgY [Enterococcus faecalis DS5]
gi|315026089|gb|EFT38021.1| TraB family protein [Enterococcus faecalis TX2137]
Length = 386
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 125/261 (47%), Gaps = 11/261 (4%)
Query: 146 YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKK 204
YLVGT H+S+ES + V+ +ID ++P V +EL R T P+ + +++ K
Sbjct: 19 YLVGTNHISEESAKLVKNVIDEVRPGCVCVELDQKRYQKYTSPEEWAKTDIIKIIKQNKL 78
Query: 205 KHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKM 264
I+Y K+A E A E A G + L DR +Q+T +R W +
Sbjct: 79 VVLFSNIVYGALQRKLAKEKGTIQAGELIQALESAEDVGADIQLIDRDIQVTFKRMWRHL 138
Query: 265 PLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHER 324
K KL+ +F F F E L L E D D V ++SK FPT+ ++ ER
Sbjct: 139 SFTQKPKLIMTF-FSEFEDVETERLEDFL-ESDSFDN---VFIQLSKKFPTIYNDMITER 193
Query: 325 DQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP--VPVHDLMTIPSPKPAVSALKV 382
D+ M + L +++ V VVGK H+ GIK K+ + +L +IPS K + +++
Sbjct: 194 DKVMVTNLQN--SKYEVNVVVVGKAHISGIKEKLKEEKNYDISELTSIPSKKLSSKLIEL 251
Query: 383 LSSLGVA-VAGVAIISGIYIN 402
+ L + + V+ SG+ +
Sbjct: 252 IFPLTIILLLAVSFFSGVQVG 272
>gi|339484536|ref|YP_004696322.1| TraB family protein [Nitrosomonas sp. Is79A3]
gi|338806681|gb|AEJ02923.1| TraB family protein [Nitrosomonas sp. Is79A3]
Length = 413
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 123/242 (50%), Gaps = 13/242 (5%)
Query: 142 TCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML-TPQNLKVPTVGEMVD 200
C+V L+GTAHVSK S +V+ +I K V +ELC SR ++ P + + +++
Sbjct: 29 NCNVTLLGTAHVSKASADKVQELIATGKYDAVAVELCPSRHKVIVNPDAMAKMDLFQVIK 88
Query: 201 MWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ + F ++A I PG+E RVA ++A V+L DR + TL+R
Sbjct: 89 NGQASMVAASLALGAFQQRMAEQFNIEPGAEMRVAIKDAQAAKLPVLLIDREIGTTLKRI 148
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMET 319
+ +P W + L++ L ++ S E + ++++ + D+L + ++ L
Sbjct: 149 YHNVPWWKRFT-LFAGLIESVI--SKEKFSAAEIEKLKEGDVLESSFAQFAENEKDLFRP 205
Query: 320 LVHERDQYMSSTLLKVATE--HSSVVAVVGKGHLQG-IKNYWKQPVP-----VHDLMTIP 371
L+ ERD+YMS+ L+K E + ++AV+G GHL G ++ Q + + L TIP
Sbjct: 206 LISERDEYMSARLIKECEENNYQHILAVIGAGHLNGMVQQLETQSITNPDERIAQLDTIP 265
Query: 372 SP 373
+P
Sbjct: 266 AP 267
>gi|255083871|ref|XP_002508510.1| predicted protein [Micromonas sp. RCC299]
gi|226523787|gb|ACO69768.1| predicted protein [Micromonas sp. RCC299]
Length = 259
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 124/257 (48%), Gaps = 37/257 (14%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT------------PQNLK 191
+VYLVGTAH+S++S EV +I ++P VFLELC +R + + P+ L+
Sbjct: 12 EVYLVGTAHISRKSADEVRNVIRSVRPDTVFLELCDARAAAMRRSMSGKSDEGGIPEPLR 71
Query: 192 --VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILG 249
+ +G D+ +K G+ + + +++ + PG EF+V EE+ + G +++LG
Sbjct: 72 QLLSALGAPGDLGEKMLGA-GLKTVYNMFRMSG---MDPGKEFKVGIEESDRIGARLVLG 127
Query: 250 DRPVQITLRRTWEKMPL--------------WHKIKLLYSFLFQAFFLPSAEDLNRMLKE 295
DR ++T+R + + L W + F+ E +LK
Sbjct: 128 DRSQELTIRALRDAITLPDILRMITGGGSMQWRDVDPQLVERFKRVDWNDPESAVELLKT 187
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
+ V LT +M + FP + ++ +RD +M+ LL + + VAVVG H+ GI+
Sbjct: 188 REAVRALT---GQMRREFPRVASAMLDQRDDHMTDGLLNKCSGRT--VAVVGMAHMDGIE 242
Query: 356 NYWKQPVPVHDLMTIPS 372
+ W+ + +T+ S
Sbjct: 243 SRWRDAMGGDGGVTLIS 259
>gi|312144617|ref|YP_003996063.1| TraB family protein [Halanaerobium hydrogeniformans]
gi|311905268|gb|ADQ15709.1| TraB family protein [Halanaerobium hydrogeniformans]
Length = 384
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 123/244 (50%), Gaps = 12/244 (4%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+ TAH+SK S +V+ +I+ KP V +EL R + + ++ ++ + K
Sbjct: 15 EIILIPTAHISKRSAEQVKEVIEEEKPDSVCVELDKQRFNSIDKEDKWSEM--DIFQVIK 72
Query: 204 KKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+K + ++ S F +++A L I G E A E A + +++L DR +QIT +R
Sbjct: 73 EKKSLLLLVNLIISSFQSRMAEKLGIKAGQEMMQAIESAQETESELVLADRNIQITFKRV 132
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W + L+ K+KL++ + F + + L+ + D L +++ EM + FP + L
Sbjct: 133 WRGLGLFEKMKLVFQIITMLFVDEEISEDD--LEALKSNDSLNIILAEMGENFPGIKRYL 190
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVSAL 380
+ ERDQY+S + + VVAV+G HL G+K ++ L IP P V
Sbjct: 191 LDERDQYLSHKIKNAPGKK--VVAVLGAAHLPGVKKELYNQQNLNKLNEIP---PEVKWT 245
Query: 381 KVLS 384
K+ S
Sbjct: 246 KIFS 249
>gi|359787040|ref|ZP_09290111.1| pheromone shutdown protein [Halomonas sp. GFAJ-1]
gi|359295690|gb|EHK59953.1| pheromone shutdown protein [Halomonas sp. GFAJ-1]
Length = 417
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 14/246 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMV 199
G L+GTAHVS ES +V +I+ V +ELC +R SM P + + ++
Sbjct: 29 GNTHYTLLGTAHVSAESADDVRNLINGGTFDAVAIELCDARHHSMNNPDAMGEQDLFQVF 88
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K + F ++A I PG+E R A E + ++L DR V ITL+R
Sbjct: 89 KQGKAGMVAASLALGAFQQRIAEQSGIQPGAEMRAAVEACQRRELPLLLVDRDVGITLKR 148
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLME 318
+ +P W + L + S +D+++ ++++ + DML E + L
Sbjct: 149 IYRNVPWWQRFSLFSGLIGSVM---SRQDVSKEDIEKLKEGDMLEATFNEFAAESEALYT 205
Query: 319 TLVHERDQYMSSTLLKVA--TEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPA 376
L+ ERD+YM+ L + A + +V+ V+G GHL+G + + P+P SP P
Sbjct: 206 PLIRERDRYMALRLAEEAPPGRYKNVLVVLGAGHLKGTVEHLEAPLP-------ESPTPE 258
Query: 377 VSALKV 382
AL+
Sbjct: 259 REALEA 264
>gi|66822397|ref|XP_644553.1| hypothetical protein DDB_G0273873 [Dictyostelium discoideum AX4]
gi|66822687|ref|XP_644698.1| hypothetical protein DDB_G0273151 [Dictyostelium discoideum AX4]
gi|60472676|gb|EAL70627.1| hypothetical protein DDB_G0273873 [Dictyostelium discoideum AX4]
gi|60472844|gb|EAL70793.1| hypothetical protein DDB_G0273151 [Dictyostelium discoideum AX4]
Length = 705
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 4/150 (2%)
Query: 211 ILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKI 270
IL + + K ++ PGSEF AF EA K G V+LGDR V ITL+R W + KI
Sbjct: 480 ILIAKLINKAGKKSKVGPGSEFITAFLEARKIGSLVVLGDRQVGITLQRVWNSLSWLEKI 539
Query: 271 KLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSS 330
K ++ + + E+++ + D +++ ++ E FP+++ T+V ERDQYM++
Sbjct: 540 KFVFYLFMASLSEITTEEIDAIKNSSD--ELVNKLLNEFRGRFPSVVHTIVTERDQYMAA 597
Query: 331 TLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
L + +VAVVGKGH+ GI W+
Sbjct: 598 RLRMCPGK--KIVAVVGKGHIGGIIREWEN 625
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 105 DETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAI 164
D N P+ T +++ +LP S IL T + L+G+ H+ K S EV I
Sbjct: 73 DNNNKTTPII--TPQLIDFDLPSSATILHSPFT----NSTIILIGSVHIHKGSSDEVSEI 126
Query: 165 IDFLKPQVVFLELCSSRVSML 185
I KP VF+ELCSSR ++
Sbjct: 127 IRKWKPDTVFVELCSSRAGII 147
>gi|338999384|ref|ZP_08638032.1| pheromone shutdown protein [Halomonas sp. TD01]
gi|338763745|gb|EGP18729.1| pheromone shutdown protein [Halomonas sp. TD01]
Length = 417
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 7/227 (3%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMV 199
G L+GTAHVS ES +V +I+ V +ELC +R SM P + + ++
Sbjct: 29 GGTRYTLLGTAHVSAESADDVRQLINSGNFDAVAIELCDARHHSMDNPDAMGEQDLFQVF 88
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K + F ++A I PG+E R A EE ++L DR V ITL+R
Sbjct: 89 RQGKAGMVAASLALGAFQQRIAEQSGIQPGAEMRAAVEECRTRKLPLLLVDRDVGITLKR 148
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLME 318
+ +P W + L + S +D+++ ++++ + DML E + L
Sbjct: 149 IYRNVPWWQRFSLFSGLIGSVM---SRQDVSKEDIEKLKEGDMLEATFSEFAAESEALYT 205
Query: 319 TLVHERDQYMSSTLLKVA--TEHSSVVAVVGKGHLQGIKNYWKQPVP 363
L+ ERD+YM+ L + A + +V+ V+G GHL+G + + P+P
Sbjct: 206 PLIRERDRYMALRLAEEAPPGRYQNVLVVLGAGHLKGTGEHLETPLP 252
>gi|148643084|ref|YP_001273597.1| pheromone shutdown protein TraB [Methanobrevibacter smithii ATCC
35061]
gi|148552101|gb|ABQ87229.1| pheromone shutdown protein, TraB family [Methanobrevibacter smithii
ATCC 35061]
Length = 392
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 127/267 (47%), Gaps = 17/267 (6%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVP-----TVGEMVDM 201
++GTAHVS S EV+ I P++V +EL R + L + + + +V +++
Sbjct: 11 IIGTAHVSANSVEEVKNTIYEQHPEIVAIELDRGRYTRLKNEMMGIEEDDTISVSKIIKE 70
Query: 202 WKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTW 261
K + S+F +K+ +++ PGSE A E A + L DR + TL+R
Sbjct: 71 EKVGLFLATTILSYFQSKIGEDVDVKPGSEMIGAIEAAEDLEIPIALIDREINTTLQRAL 130
Query: 262 EKMPLWHKIKLLYSFLFQAF-FLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
KM K+K +S L F E LK D++D L ++ S P + E L
Sbjct: 131 NKMGFVEKLKFAFSLLTSIFSSDEEDEIDIEELKNPDNLDELMEFFKDES---PKVYEVL 187
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP--VPVHDLMTIPSPKPAVS 378
V ERD Y++ +L++ +H V+AVVG GH GI Y P +P + I K +
Sbjct: 188 VQERDAYLAGNILRIPQDH--VIAVVGAGHKPGINRYLDNPETIPPLSQLEITKEKKGIP 245
Query: 379 ALKVLSS----LGVAVAGVAIISGIYI 401
K++ + L V + +A ISGI I
Sbjct: 246 WFKIILALIPILFVVIFFLAYISGINI 272
>gi|222640968|gb|EEE69100.1| hypothetical protein OsJ_28165 [Oryza sativa Japonica Group]
Length = 361
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 124/235 (52%), Gaps = 30/235 (12%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR------VSMLTPQNLKVP---- 193
DV+++GT+H+S+ES +VE ++ ++P V +ELC SR + + T + P
Sbjct: 79 DVWILGTSHLSEESVADVERVLRAVRPDNVVVELCRSRQDRPGIMYVTTDSSAGEPLLKS 138
Query: 194 ------------TVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMK 241
V +++ + +L + F +K++S G EFR A + +
Sbjct: 139 NMFSLGGSKFFGAVNRSINLGGQTALALRLLLAVFSSKISSGANRPFGEEFRAARKVSED 198
Query: 242 YGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDM 301
G +++LGDRP++ITL R W+ + K KL+ S LF+ + S D ++ K
Sbjct: 199 LGAQLVLGDRPIEITLERAWKSLSWDEKTKLVVS-LFRG--ITSTTDTSQDEKAAGSPYE 255
Query: 302 LTLVIQEMSKAFPTLMETLVHERDQYMSSTLL--KVATEHSSVVAVVGKGHLQGI 354
L +++S ++P+L++ L+HERD +++ +L K + +VV ++GKGH+ G+
Sbjct: 256 L---YEKLSISYPSLLQPLIHERDMFLAWSLKRSKAVNKSKTVVGIIGKGHMNGV 307
>gi|317129002|ref|YP_004095284.1| TraB family protein [Bacillus cellulosilyticus DSM 2522]
gi|315473950|gb|ADU30553.1| TraB family protein [Bacillus cellulosilyticus DSM 2522]
Length = 388
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 119/246 (48%), Gaps = 22/246 (8%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK--- 203
L+GTAHVSK+S +V+ II+ P V +EL R Q++K +D++K
Sbjct: 18 LIGTAHVSKKSAEQVKEIIEAENPDSVCVELDEQRY-----QSIKDGNKWRNMDIFKVIK 72
Query: 204 KKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+K T + S F ++A I PG E E A + G +IL DR +QIT R
Sbjct: 73 EKKATLLLMNLFISSFQKRMAKQFGIKPGQEMIQGIESANEIGADLILADRNIQITFARI 132
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDV-DMLTLVIQEMSKAFPTLMET 319
W + + K KLL + + F S E ++ E DML ++ E +++FP L
Sbjct: 133 WHGLGVMGKAKLLTAIIASIF---SNEKISEEELEKLKEQDMLNSMLDEFTQSFPQLKVP 189
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGI-KNYWKQPVPVHDLMTIPSPKPAVS 378
L+ ERDQY++ + + +VAV+G H+ GI K + KQ HDL I P
Sbjct: 190 LIDERDQYLAQKIKDAPGK--KIVAVLGAAHVPGIQKEFHKQ----HDLKAITKRPPKSK 243
Query: 379 ALKVLS 384
K++
Sbjct: 244 VPKIIG 249
>gi|386718226|ref|YP_006184552.1| pheromone shutdown protein [Stenotrophomonas maltophilia D457]
gi|384077788|emb|CCH12377.1| Pheromone shutdown protein [Stenotrophomonas maltophilia D457]
Length = 406
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 117/235 (49%), Gaps = 9/235 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS+ S VE ID + V +EL R+ L+ P L + E++ +
Sbjct: 30 LLGTAHVSRASVEAVEKAIDSGRFDAVAVELDPQRLQALSDPDTLAKLDLVEVIRKGRVA 89
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S + ++A L+I PG+E + A E A + V L DR V +T RR +++
Sbjct: 90 LFAANLALSAYQRRLAEQLDIEPGAELKRAVELARERDLPVHLIDREVGLTFRRASQRLG 149
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL+ A S E ++++ DML E + P L ET++ ERD
Sbjct: 150 FFGKLKLVAGL--GAGLFSSEEVGENEIEKLKQGDMLESSFGEFASESPALYETIIGERD 207
Query: 326 QYMSSTLLKVAT-EHSSVVAVVGKGHLQGIKNYW----KQPVPVH-DLMTIPSPK 374
+YM++ L + T + V+AVVG GHL G+ Y + P P+ +L +P +
Sbjct: 208 RYMATRLREEHTPQQREVLAVVGAGHLAGLARYLETDTEAPAPLRAELEAVPKKR 262
>gi|359688107|ref|ZP_09258108.1| pheromone shutdown protein [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418747696|ref|ZP_13303991.1| TraB family protein [Leptospira licerasiae str. MMD4847]
gi|418758011|ref|ZP_13314195.1| TraB family protein [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|384114718|gb|EIE00979.1| TraB family protein [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|404276546|gb|EJZ43857.1| TraB family protein [Leptospira licerasiae str. MMD4847]
Length = 398
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 113/223 (50%), Gaps = 12/223 (5%)
Query: 137 TAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLK---V 192
T E + ++GTAH+S++S EV II KP V +ELC+SR+ S+ P + K +
Sbjct: 12 TLELNGSQITILGTAHISQKSIDEVSRIIQEEKPDTVCVELCASRMRSVQDPDHWKKLDI 71
Query: 193 PTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRP 252
V + MW + + K + I PG E R A EE K K++ DR
Sbjct: 72 FKVFKERKMWLLLSSLILSSFQ----KKLGYGNIRPGDEMRKAIEEGNKIHAKIVPVDRE 127
Query: 253 VQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMSK 311
+ TL+R W + W ++ +L+S L + + E+++ ++EM D+L + ++
Sbjct: 128 ISTTLKRAWWNVGFWSRM-MLFSTLVSSLIV--KEEISPEKIEEMKSDDVLKDLFSQLPS 184
Query: 312 AFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGI 354
+ ++ ++ ERD Y++ + + A + AVVG GHL+GI
Sbjct: 185 RYQSVKNVIIDERDAYLAQRIRQQAAVGKKIFAVVGAGHLEGI 227
>gi|422730786|ref|ZP_16787168.1| TraB family protein [Enterococcus faecalis TX0645]
gi|315163099|gb|EFU07116.1| TraB family protein [Enterococcus faecalis TX0645]
Length = 386
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 11/261 (4%)
Query: 146 YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKK 204
YLVGT H+S+ES + V+ +ID ++P V +EL R T P+ + +++ +
Sbjct: 19 YLVGTNHISEESAKLVKNVIDEVRPGCVCVELDQKRYQKYTSPEEWAKTDIIKIIKQNRL 78
Query: 205 KHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKM 264
I+Y K+A E A E A G + L DR +Q+T +R W +
Sbjct: 79 VVLFSNIVYGALQRKLAKEKGTIQAGELIQALESAEDVGADIQLIDRDIQVTFKRMWRHL 138
Query: 265 PLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHER 324
K KL+ +F F F E L L E D D V ++SK FPT+ ++ ER
Sbjct: 139 SFTQKPKLIMTF-FSEFEDVETERLEDFL-ESDSFDN---VFIQLSKKFPTIYNDMITER 193
Query: 325 DQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ--PVPVHDLMTIPSPKPAVSALKV 382
D+ M + L +++ V VVGK H+ GIK K+ + +L +IPS K + +++
Sbjct: 194 DKVMVTNLQN--SKYDVNVVVVGKAHINGIKAKLKEEKSYDISELTSIPSKKLSSKLIEL 251
Query: 383 LSSLGVA-VAGVAIISGIYIN 402
+ L + + V+ SG+ +
Sbjct: 252 IFPLTIILLLAVSFFSGVQVG 272
>gi|1041116|dbj|BAA11196.1| TRAB [Enterococcus faecalis]
Length = 384
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 122/245 (49%), Gaps = 11/245 (4%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNLKVPTVGEMVDMW 202
++ LVGT+H+SKES V+ +I+ P V LE +R + + P + +++
Sbjct: 13 EIILVGTSHISKESAELVKEVIEKESPDTVCLEWDKTRYNKYMNPDEWSDTDIVQVIKQK 72
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K ++YS +A + PG+EF A A K G K+ L DR Q+T +R W
Sbjct: 73 KLIVLISSVIYSLIQKHLAKINDSVPGAEFFQAVNSAEKIGAKLALVDRDSQVTFKRFWR 132
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
+PL K ++F L AED +K++ + + + +++ + +P L E+ +
Sbjct: 133 LIPLRKKALFPHAF---GKVLEGAEDSKEEMKKLLNSENFEPIFEQLQQTYPELWESFLI 189
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ--PVPVHDLMTIPSPKPAVSAL 380
ERD YMS+ +L E +V V+G+ HL G++ K+ + +L +P P + +
Sbjct: 190 ERDLYMSTKILN--EEGEKIVVVIGQAHLNGVEKNIKENRKANIEELDGLP---PKLWST 244
Query: 381 KVLSS 385
+VL S
Sbjct: 245 RVLES 249
>gi|468462|dbj|BAA06008.1| TraB [Enterococcus faecalis]
Length = 384
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 122/245 (49%), Gaps = 11/245 (4%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNLKVPTVGEMVDMW 202
++ LVGT+H+SKES V+ +I+ P V LE +R + + P + +++
Sbjct: 13 EIILVGTSHISKESAELVKEVIEKESPDTVCLEWDKTRYNKYMNPDEWSDTDIVQVIKQK 72
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K ++YS +A + PG+EF A A K G K+ L DR Q+T +R W
Sbjct: 73 KLIVLISSVIYSLIQNHLAKINDSVPGAEFFQAVNSAEKIGAKLALVDRDSQVTFKRFWR 132
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
+PL K ++F L AED +K++ + + + +++ + +P L E+ +
Sbjct: 133 LIPLRKKALFPHAF---GKVLEGAEDSKEEMKKLLNSENFEPIFEQLQQTYPELWESFLI 189
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ--PVPVHDLMTIPSPKPAVSAL 380
ERD YMS+ +L E +V V+G+ HL G++ K+ + +L +P P + +
Sbjct: 190 ERDLYMSTKILN--EEGEKIVVVIGQAHLNGVEKNIKENRKANIEELDGLP---PKLWST 244
Query: 381 KVLSS 385
+VL S
Sbjct: 245 RVLES 249
>gi|313888452|ref|ZP_07822119.1| TraB family protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845481|gb|EFR32875.1| TraB family protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 383
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 19/244 (7%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGE---MVD 200
++ L+ TAHVS+ES V I P + +EL R +NLK P + ++D
Sbjct: 14 EIILIPTAHVSQESVNLVRETIKEENPDSICIELDDQRY-----KNLKNPEAWKNTNIID 68
Query: 201 MWKKKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ K+K T ++ S + +A L+ PG E + + + G ++L DR +Q T
Sbjct: 69 IIKEKKVTLLIANLILSSYQKNIAKKLKTKPGQEMMEGIKASEEMGINLVLADRSIQTTF 128
Query: 258 RRTWEKMPLWHKIKLLYSFL-FQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
R W KM + KIKL +S + S EDL R+++ D L L I++M K +P +
Sbjct: 129 MRIWRKMGFFEKIKLFFSLMSIDDEEDVSEEDLQRLIER----DNLELAIEDMGKDYPQI 184
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPA 376
TL+HERD++++ + + VVA++G H G++ + + +L IP PK
Sbjct: 185 AATLLHERDKFLAYNIKN--SPGKKVVAILGAAHTPGVEEEIFKDQDIEELNKIP-PKSL 241
Query: 377 VSAL 380
+ L
Sbjct: 242 IGKL 245
>gi|218201556|gb|EEC83983.1| hypothetical protein OsI_30131 [Oryza sativa Indica Group]
Length = 361
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 125/235 (53%), Gaps = 30/235 (12%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR------VSMLTPQNLKVP---- 193
DV+++GT+H+S+ES +VE ++ ++P V +ELC SR + + T + P
Sbjct: 79 DVWILGTSHLSEESVADVERVLRAVRPDNVVVELCRSRQDRPGIMYVTTDSSAGEPLLKS 138
Query: 194 ------------TVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMK 241
V +++ + +L + F +K++S + G EFR A + +
Sbjct: 139 NMFSLGGSKFFGAVNRSINLGGQTALALRLLLAVFSSKISSGVNRPFGEEFRAARKVSED 198
Query: 242 YGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDM 301
G +++LGDRP++ITL R W+ + K KL+ S LF+ + S D + ++
Sbjct: 199 LGAQLVLGDRPIEITLERAWKSLSWDEKTKLVVS-LFRG--ITSTTDTS---QDEQAAGS 252
Query: 302 LTLVIQEMSKAFPTLMETLVHERDQYMSSTLL--KVATEHSSVVAVVGKGHLQGI 354
+ +++S ++P+L++ L+HERD +++ +L K + +VV ++GKGH+ G+
Sbjct: 253 PYELYEKLSISYPSLLQPLIHERDMFLAWSLKRSKAVNKSKTVVGIIGKGHMNGV 307
>gi|194365417|ref|YP_002028027.1| TraB family protein [Stenotrophomonas maltophilia R551-3]
gi|194348221|gb|ACF51344.1| TraB family protein [Stenotrophomonas maltophilia R551-3]
Length = 410
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 9/235 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS+ S VE ID + V +EL R+ L+ P L + E++ +
Sbjct: 34 LLGTAHVSRASVEAVEKAIDSGRFDAVAVELDPQRLQALSDPDTLAKLDLVEVIRKGRVA 93
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S + ++A L+I PG+E + A E A + V L DR V +T RR +++
Sbjct: 94 LFAANLALSAYQRRLAEQLDIEPGAELKRAVELARERDLPVHLIDREVGLTFRRASQRLG 153
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL+ A S E ++++ DML E + P L ET++ ERD
Sbjct: 154 FFGKLKLVAGL--GAGLFSSEEVGENEIEKLKQGDMLESSFGEFASESPALYETIIGERD 211
Query: 326 QYMSSTLLKVAT-EHSSVVAVVGKGHLQGIKNYW----KQPVPVH-DLMTIPSPK 374
+YM++ L + + V+AVVG GHL G+ Y + P P+ +L ++P +
Sbjct: 212 RYMATRLREAHDPQQREVLAVVGAGHLAGLARYLETDTEAPAPLRAELESVPKKR 266
>gi|292492592|ref|YP_003528031.1| TraB family protein [Nitrosococcus halophilus Nc4]
gi|291581187|gb|ADE15644.1| TraB family protein [Nitrosococcus halophilus Nc4]
Length = 400
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 124/240 (51%), Gaps = 16/240 (6%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWK 203
+ L+GTAHVS+ S V+A++ V +ELC SR +++ P L + E++ K
Sbjct: 20 ITLLGTAHVSRASAEHVKALLATGDYDAVAVELCPSRYHALINPDALSRMDLFEVLRKGK 79
Query: 204 KKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
T + + + ++A I PG+E R A + A V+L DR V TL+R +
Sbjct: 80 AAMVTASLALAAYQQRIAEQFGIEPGAEMRAAVDSAHTAKLPVVLIDREVGTTLKRIYRN 139
Query: 264 MPLWHKIKLLYSFLFQAFF---LPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
+P W + L+ + LF + S E++ R LKE D ++ T Q ++A P L L
Sbjct: 140 VPWWQRFNLI-AGLFASLVSRDTVSEEEVER-LKEGDVLE--TTFSQFAAEARP-LYTPL 194
Query: 321 VHERDQYMSSTLLKVAT--EHSSVVAVVGKGHLQGIKNYWKQPVP-----VHDLMTIPSP 373
+ ERD+YM++ L + T E+ ++ V+G GHL+G+ Y +Q + +L +PSP
Sbjct: 195 IDERDRYMAARLREEITHGEYHHLLGVIGAGHLRGVTRYLEQDSASAKKIITELDQVPSP 254
>gi|222445321|ref|ZP_03607836.1| hypothetical protein METSMIALI_00949 [Methanobrevibacter smithii
DSM 2375]
gi|288869663|ref|ZP_05975535.2| pheromone shutdown protein [Methanobrevibacter smithii DSM 2374]
gi|222434886|gb|EEE42051.1| TraB family protein [Methanobrevibacter smithii DSM 2375]
gi|288860904|gb|EFC93202.1| pheromone shutdown protein [Methanobrevibacter smithii DSM 2374]
Length = 392
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 127/267 (47%), Gaps = 17/267 (6%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVP-----TVGEMVDM 201
++GTAHVS S EV+ I P++V +EL R + L + + + +V +++
Sbjct: 11 IIGTAHVSANSVEEVKNTIYEQHPEIVAIELDRGRYTRLKNEMMGIEEDDTISVSKIIKE 70
Query: 202 WKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTW 261
K + S+F +K+ +++ PGSE A E A + L DR + TL+R
Sbjct: 71 EKVGLFLATTILSYFQSKIGEDVDVKPGSEMIGAIEAAEDLEIPIALIDREINTTLQRAL 130
Query: 262 EKMPLWHKIKLLYSFLFQAF-FLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
KM K+K +S L F E LK D++D L ++ S P + E L
Sbjct: 131 NKMGFVEKLKFGFSLLTSIFSSDEEDEIDIEELKNPDNLDELMEFFKDES---PKVYEVL 187
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP--VPVHDLMTIPSPKPAVS 378
V ERD Y++ +L++ +H V+AVVG GH GI Y P +P + I K +
Sbjct: 188 VQERDAYLAGNILRIPQDH--VIAVVGAGHKPGINRYLDNPETIPPLSQLEITKEKKGIP 245
Query: 379 ALKVLSS----LGVAVAGVAIISGIYI 401
K++ + L V + +A ISGI I
Sbjct: 246 WFKIILALIPILFVVIFFLAYISGINI 272
>gi|418718500|ref|ZP_13278032.1| TraB family protein [Leptospira borgpetersenii str. UI 09149]
gi|418736180|ref|ZP_13292583.1| TraB family protein [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|410744712|gb|EKQ93449.1| TraB family protein [Leptospira borgpetersenii str. UI 09149]
gi|410748187|gb|EKR01088.1| TraB family protein [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
Length = 439
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 117/223 (52%), Gaps = 13/223 (5%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVGEMV 199
+V ++GTAH+S++S EV+ II KP +V +ELC+SR+ L + L + V +
Sbjct: 64 NVTILGTAHISQKSIDEVQKIIRKEKPDMVCVELCNSRMRSLKENEHWKKLDIFKVFKER 123
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
M+ + + L K + I PG E R+A E K G +++ DR + TL+R
Sbjct: 124 KMYLLLSSLILSAFQKKLGKGS----IRPGDEMRMAIGEGEKIGARIVPIDREISTTLKR 179
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPTLME 318
W + ++++ ++ L ED++ ++EM D+L + ++ K + ++
Sbjct: 180 AWWNIGIFNR---MFLLSALLASLFVKEDVSEEKIEEMKSEDVLKDLFSQLPKRYESIKN 236
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNY-WKQ 360
++ ERD Y++ + + E + AVVG GHLQGI N+ W++
Sbjct: 237 VIIDERDSYLAQKIRDASKEGKKIFAVVGAGHLQGIMNHVWEE 279
>gi|383791908|ref|YP_005476482.1| pheromone shutdown-related protein TraB [Spirochaeta africana DSM
8902]
gi|383108442|gb|AFG38775.1| pheromone shutdown-related protein TraB [Spirochaeta africana DSM
8902]
Length = 398
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 7/216 (3%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN-LKVPTVGEMVDMW 202
++ LVGTAHVS++S +V II P V +E+ SR L+ +N + + +++
Sbjct: 20 EIVLVGTAHVSRDSVDQVREIIQTELPDTVCVEIDHSRYQTLSQKNRWQSLDIAQVLKQG 79
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
+ ++ S F ++ + L + PG E A A + G +L DR +Q TLRR W
Sbjct: 80 RGFLLLVNLVLSSFQRRLGADLGVSPGEEMLAAVNAAKERGIPFVLCDREIQTTLRRAWS 139
Query: 263 KMPLWHKIKLLYSFLFQAFFLPS-AEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLV 321
+ W K KLL + L F +ED LKE ++ + ++E++ P L+
Sbjct: 140 QTGFWGKNKLLAALLSAGFSREKFSEDEIEKLKEKSELHGM---MEELADFLPQAKHVLI 196
Query: 322 HERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNY 357
ERDQ++++ + + S +VAVVG GH+ G+ +
Sbjct: 197 DERDQFLATKVFQ--APGSRIVAVVGAGHVPGMLRW 230
>gi|145347130|ref|XP_001418030.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578258|gb|ABO96323.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 256
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 112/234 (47%), Gaps = 25/234 (10%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML----------TPQNLKVP 193
++YLVGTAHVS+ S REV +I +KP VV +ELC R+ + P L
Sbjct: 23 EIYLVGTAHVSERSAREVRELIRLVKPSVVHVELCEQRLRTMRERIVDDEEKKPDFLGAF 82
Query: 194 TVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
G + D + F YS+F K++ + PG+EF+ A +EA G K++ DR V
Sbjct: 83 AGGNVGDGLLQA--AFKTFYSFF--KLSG---LDPGAEFKEAVKEAGCIGAKIVCADRDV 135
Query: 254 QITLRRTWEKMPLWHKIKLLYS------FLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQ 307
+TLRR E + + ++ + S +++ +++ + + + +
Sbjct: 136 TMTLRRLRESVTTMDVMAIVMGRTRPGGPPPPSAMGGSMDNIEHIVENLKTRRHIREMRE 195
Query: 308 EMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP 361
++ P + V ERD+ M LL+ E VVAVVG H+ GI+ W++
Sbjct: 196 YLAYQMPKIARVFVDERDEIMVEALLRCKGER--VVAVVGMAHMDGIERRWEEA 247
>gi|254522042|ref|ZP_05134097.1| pheromone shutdown protein [Stenotrophomonas sp. SKA14]
gi|219719633|gb|EED38158.1| pheromone shutdown protein [Stenotrophomonas sp. SKA14]
Length = 410
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 116/235 (49%), Gaps = 9/235 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS+ S VE ID + V +EL R+ L+ P L + E++ +
Sbjct: 34 LLGTAHVSRASVEAVEKAIDSGRFDAVAVELDPQRLQALSDPDTLAKLDLVEVIRKGRVA 93
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S + ++A L+I PG+E + A E A + V L DR V +T RR +++
Sbjct: 94 LFAANLALSAYQRRLAEQLDIEPGAELKRAVELARERNLPVHLIDREVGLTFRRASQRLG 153
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL+ A S E ++++ DML E + P L ET++ ERD
Sbjct: 154 FFGKLKLVAGL--GAGLFSSEEVGENEIEKLKQGDMLESSFGEFASESPALYETIIGERD 211
Query: 326 QYMSSTLLKVAT-EHSSVVAVVGKGHLQGIKNYW----KQPVPVH-DLMTIPSPK 374
+YM++ L + + V+AVVG GHL G+ Y + P P+ +L +P +
Sbjct: 212 RYMATRLREERDPQQREVLAVVGAGHLAGLARYLETDTEAPAPLRAELEAVPKKR 266
>gi|359725691|ref|ZP_09264387.1| pheromone shutdown protein [Leptospira weilii str. 2006001855]
Length = 408
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 119/237 (50%), Gaps = 12/237 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 30 GKAIVTVLGTAHISQKSIDEVQKIIRKEKPDTVCVELCNSRMRSLKDNEHWKKLDIFKVF 89
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A E K G +++ DR + T
Sbjct: 90 KERKMYLLLSSLILSAFQKKLGKDS----IRPGDEMRMAIVEGEKIGARIVPIDREISTT 145
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + ++++ ++ L ED++ ++EM D+L + ++ K + +
Sbjct: 146 LKRAWWNIGIFNR---MFLLSALLASLFVKEDVSEEKIEEMKSEDVLKDLFSQLPKRYES 202
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS 372
+ ++ ERD Y++ + A E + AVVG GHLQGI ++ ++ + L +P
Sbjct: 203 IKNVIIDERDSYLAQKIRDAAKEGKKIFAVVGAGHLQGIMSHVQEERDISSLDHLPQ 259
>gi|389783433|ref|ZP_10194805.1| pheromone shutdown-related protein TraB [Rhodanobacter spathiphylli
B39]
gi|388434696|gb|EIL91630.1| pheromone shutdown-related protein TraB [Rhodanobacter spathiphylli
B39]
Length = 411
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 8/214 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKKK 205
++GTAHVS+ S VEA++D V +ELC SR SM P+ K + +++ K
Sbjct: 32 VLGTAHVSRSSMEAVEALLDHEHFDAVAVELCDSRAQSMRDPEAFKQMDLFKVIRQGKAG 91
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
++ S F ++A I PG+E + A + A + + DR V TL+R W +
Sbjct: 92 MVAASLVLSTFQKRLADQSGIQPGAEMKAAMDGAERRNLPLWTIDREVGTTLKRAWRSVG 151
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
W + LL L F E ++++ D+L E + L ++L+ ERD
Sbjct: 152 FWQRFGLLGGLLASVF--DREEIAQGDIEKLKQEDLLESAFSEFASGSRPLYDSLIGERD 209
Query: 326 QYMSSTLLKVA-----TEHSSVVAVVGKGHLQGI 354
+M++ L + A TE+ V+ V+G GHL+G+
Sbjct: 210 AFMAARLRQQAARSSGTENRRVLVVIGAGHLKGM 243
>gi|408793698|ref|ZP_11205304.1| TraB family protein [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408462202|gb|EKJ85931.1| TraB family protein [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 407
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 16/224 (7%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLK---VPTVG 196
G +V+++GTAHVSK+S EVE +I LKP V+ +ELC SR+ S+ P LK + V
Sbjct: 30 GKTEVHILGTAHVSKQSVDEVEKMIQKLKPDVICVELCESRMKSVEDPDYLKKLDIFKVF 89
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ MW + + K + +I PG E R A ++ DR +Q T
Sbjct: 90 KERKMWLLLSSLILSSFQ----KKIGNKDIKPGDEMRKAITMGRALQKPIVAIDREIQTT 145
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDL-NRMLKEMDDVDMLTLVIQEMSKAFPT 315
L+R+W + + K +Y F L ED+ + ++EM D+L + ++ K + +
Sbjct: 146 LKRSWGNVGFFSK---MYLFSALLASLLVREDVSDDKIEEMKSDDILKDLFSQIPKKYES 202
Query: 316 LMETLVHERDQYMSSTLLKVATEHSS---VVAVVGKGHLQGIKN 356
+ ++ ERD Y++ ++ ATE S V+AVVG GHL GI+
Sbjct: 203 VKHVIIDERDVYLAEK-IRQATEGKSAKKVLAVVGAGHLAGIER 245
>gi|386345882|ref|YP_006044131.1| TraB family protein [Spirochaeta thermophila DSM 6578]
gi|339410849|gb|AEJ60414.1| TraB family protein [Spirochaeta thermophila DSM 6578]
Length = 397
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 135/271 (49%), Gaps = 33/271 (12%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQ----NLKVPTVGEMV 199
++ LVGTAHVSK+S EV +I P V +E+ R+S L + NL V V
Sbjct: 19 EIILVGTAHVSKQSVEEVRGVIREEAPDGVCVEIDPQRLSALRQEERWSNLDVYRV---- 74
Query: 200 DMWKKKHNTFGIL----YSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQI 255
++ F +L S F ++ + PG E + A E A + G DR VQ+
Sbjct: 75 ---LREGRGFMLLANLVLSSFQRRIGLETGVKPGEEMKAAVESAEELGIPYHTCDRDVQV 131
Query: 256 TLRRTWEKMPLWHKIKLLYSFLFQAFFLP--SAEDLNRMLKEMDDVDMLTLVIQEMSKAF 313
TLRR W + LW + KLL + L AF SAE++ R+ + D L +++E++
Sbjct: 132 TLRRAWARTSLWGRAKLLAALLASAFEDEKISAEEVERLKR----TDALQAMMEELASYL 187
Query: 314 PTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK------QPVPVHDL 367
P + E L+ ERD Y++ + + + +V VVG GHL+GI + + + V DL
Sbjct: 188 PEVKEVLIDERDVYLARRIWE--SPGRKLVVVVGAGHLEGIVRHLERCAAGDEGVAFGDL 245
Query: 368 MTIPSPKPAVSALKVLSSLGVAVAGVAIISG 398
T+P P+ A KVL L AV + +I+G
Sbjct: 246 ETVP---PSGRAGKVLGWLVPAVV-LGLIAG 272
>gi|408824018|ref|ZP_11208908.1| transmembrane TraB family protein [Pseudomonas geniculata N1]
Length = 410
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 118/238 (49%), Gaps = 15/238 (6%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS+ S VE ID + V +EL R+ L+ P L + E++ +
Sbjct: 34 LLGTAHVSRASVEAVEKAIDSGRFDAVAVELDPQRLQALSDPDTLAKLDLVEVIRKGRVA 93
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S + ++A L+I PG+E + A E A + V L DR V +T RR +++
Sbjct: 94 LFAANLALSAYQRRLAEQLDIEPGAELKRAVELARERDLPVHLIDREVGLTFRRASQRLG 153
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL+ A S E ++++ DML E + P L ET++ ERD
Sbjct: 154 FFGKLKLVAGL--GAGLFSSEEVGENEIEKLKQGDMLESSFGEFASESPALYETIIGERD 211
Query: 326 QYMSSTLLKVATEHS----SVVAVVGKGHLQGIKNYW----KQPVPVH-DLMTIPSPK 374
+YM++ L + EH+ V+AVVG GHL G+ Y + P P+ +L +P +
Sbjct: 212 RYMATRLRE---EHNPQQREVLAVVGAGHLAGLARYLETDTEAPAPLRAELEAVPKKR 266
>gi|424668397|ref|ZP_18105422.1| TraB family protein [Stenotrophomonas maltophilia Ab55555]
gi|401068659|gb|EJP77183.1| TraB family protein [Stenotrophomonas maltophilia Ab55555]
gi|456734279|gb|EMF59101.1| Pheromone shutdown protein [Stenotrophomonas maltophilia EPM1]
Length = 406
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 118/238 (49%), Gaps = 15/238 (6%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS+ S VE ID + V +EL R+ L+ P L + E++ +
Sbjct: 30 LLGTAHVSRASVEAVEKAIDSGRFDAVAVELDPQRLQALSDPDTLAKLDLVEVIRKGRVA 89
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S + ++A L+I PG+E + A E A + V L DR V +T RR +++
Sbjct: 90 LFAANLALSAYQRRLAEQLDIEPGAELKRAVELARERDLPVHLIDREVGLTFRRASQRLG 149
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL+ A S E ++++ DML E + P L ET++ ERD
Sbjct: 150 FFGKLKLVAGL--GAGLFSSEEVGENEIEKLKQGDMLESSFGEFASESPALYETIIGERD 207
Query: 326 QYMSSTLLKVATEHS----SVVAVVGKGHLQGIKNYW----KQPVPVH-DLMTIPSPK 374
+YM++ L + EH+ V+AVVG GHL G+ Y + P P+ +L +P +
Sbjct: 208 RYMATRLRE---EHNPQQREVLAVVGAGHLAGLARYLETDTEAPAPLRAELEAVPKKR 262
>gi|255976487|ref|ZP_05427073.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|255969359|gb|EET99981.1| conserved hypothetical protein [Enterococcus faecalis T2]
Length = 384
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 126/248 (50%), Gaps = 17/248 (6%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNLKVPTVGEMVDMW 202
++ LVGTAH+S ES V+ II+ P VV LE SR L P + ++V +
Sbjct: 13 EIILVGTAHISSESAELVKNIIEEENPDVVCLEWDQSRYDKYLNPDEW---SDTDIVQVI 69
Query: 203 KKKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K+K T ++Y +A + G+EF A A K G K+ L DR Q+T +R
Sbjct: 70 KQKRLTVLISSVIYKLIQKHLAKINDSVAGAEFFEAVSSAKKVGAKIALVDRDSQVTFKR 129
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
W +PL K L Y+ F + + E MLK ++ + + +++ +A+P L +
Sbjct: 130 FWRLIPLRKKALLPYA--FGSVLEGAEESEEEMLKLLNS-ENFEPIFEQLQEAYPELWKV 186
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK--QPVPVHDLMTIPSPKPAV 377
L+ ERDQY++ + E +V V+G+ HL+G++ K Q + + +L T+P P +
Sbjct: 187 LLVERDQYLAQKI--SDQEAGKIVVVIGQAHLRGVEKNLKSNQQINIKELETLP---PKL 241
Query: 378 SALKVLSS 385
+ KVL S
Sbjct: 242 WSTKVLES 249
>gi|422690881|ref|ZP_16748924.1| TraB family protein [Enterococcus faecalis TX0031]
gi|315154412|gb|EFT98428.1| TraB family protein [Enterococcus faecalis TX0031]
Length = 384
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 126/248 (50%), Gaps = 17/248 (6%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNLKVPTVGEMVDMW 202
++ LVGTAH+S ES V+ II+ P VV LE SR L P + ++V +
Sbjct: 13 EIILVGTAHISSESAELVKNIIEEENPDVVCLEWDQSRYDKYLNPDEW---SDTDIVQVI 69
Query: 203 KKKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K+K T ++Y +A + G+EF A A K G K+ L DR Q+T +R
Sbjct: 70 KQKRLTVLISSVIYKLIQKHLAKINDSVAGAEFFEAVSSAKKVGAKIALVDRDSQVTFKR 129
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
W +PL K L Y+ F + + E MLK ++ + + +++ +A+P L +
Sbjct: 130 FWRLIPLRKKALLPYA--FGSVLEGAEESEEEMLKLLNS-ENFEPIFEQLQEAYPELWKV 186
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK--QPVPVHDLMTIPSPKPAV 377
L+ ERDQY++ + E +V V+G+ HL+G++ K Q + + +L T+P P +
Sbjct: 187 LLVERDQYLAQKI--SDQEAGKIVVVIGQAHLRGVEKNLKSNQQINIKELETLP---PKL 241
Query: 378 SALKVLSS 385
+ KVL S
Sbjct: 242 WSTKVLES 249
>gi|417782289|ref|ZP_12430021.1| TraB family protein [Leptospira weilii str. 2006001853]
gi|410777466|gb|EKR62112.1| TraB family protein [Leptospira weilii str. 2006001853]
Length = 408
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 119/237 (50%), Gaps = 12/237 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 30 GKAIVTVLGTAHISQKSIDEVQKIIRKEKPDTVCVELCNSRMRSLKDNEHWKKLDIFKVF 89
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A E K G +++ DR + T
Sbjct: 90 KERKMYLLLSSLILSAFQKKLGKDS----IRPGDEMRMAIVEGEKIGARIVPIDREISTT 145
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + ++++ ++ L ED++ ++EM D+L + ++ K + +
Sbjct: 146 LKRAWWNIGIFNR---MFLLSALLASLFVKEDVSEEKIEEMKSEDVLKDLFSQLPKRYES 202
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPS 372
+ ++ ERD Y++ + A E + AVVG GHLQGI ++ ++ + L +P
Sbjct: 203 IKNVIIDERDSYLAQKIRDAAKEGKKIFAVVGAGHLQGIMSHVQEERDISSLDHLPQ 259
>gi|190574001|ref|YP_001971846.1| transmembrane TraB family protein [Stenotrophomonas maltophilia
K279a]
gi|190011923|emb|CAQ45544.1| putative transmembrane TraB family protein [Stenotrophomonas
maltophilia K279a]
Length = 410
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 116/235 (49%), Gaps = 9/235 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS+ S VE ID + V +EL R+ L+ P L + E++ +
Sbjct: 34 LLGTAHVSRASVEAVEKAIDSGRFDAVAVELDPQRLQALSDPDTLAKLDLVEVIRKGRVA 93
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S + ++A L+I PG+E + A E A + V L DR V +T RR +++
Sbjct: 94 LFAANLALSAYQRRLAEQLDIEPGAELKRAVELARERDLPVHLIDREVGLTFRRASQRLG 153
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL+ A S E ++++ DML E + P L ET++ ERD
Sbjct: 154 FFGKLKLVAGL--GAGLFSSEEVGENEIEKLKQGDMLESSFGEFASESPALYETIIGERD 211
Query: 326 QYMSSTLLKVAT-EHSSVVAVVGKGHLQGIKNYW----KQPVPVH-DLMTIPSPK 374
+YM++ L + + V+AVVG GHL G+ Y + P P+ +L +P +
Sbjct: 212 RYMATRLREEHNPQQREVLAVVGAGHLAGLARYLETDTEAPAPLRAELEAVPKKR 266
>gi|323343171|ref|ZP_08083402.1| hypothetical protein HMPREF0357_11583 [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322463235|gb|EFY08430.1| hypothetical protein HMPREF0357_11583 [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 380
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 11/234 (4%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWK 203
++ V TAHVSK+S +V+ I+ ++PQ V +EL +R +++ K + +++ +
Sbjct: 11 LHFVSTAHVSKQSVLDVQQAIETVQPQAVCIELDDNRARNLMESDKYKEIDIKQIIKTKR 70
Query: 204 KKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
++ S + K+A L G E R A A V DR VQ+T +R W
Sbjct: 71 VGAFIATLVLSSYQKKLADDLNTSVGQEMRQAIVSAQDVDASVHYIDRDVQVTFKRIWGN 130
Query: 264 MPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDV---DMLTLVIQEMSKAFPTLMETL 320
+ + KI LL + LF F ED N +++++ D+L ++EM + P + ++L
Sbjct: 131 LTFFKKISLLSTLLFSVF-----EDDNVSEDDVENLKESDLLFESVREMDEKLPAISKSL 185
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPK 374
+HER+ +M+ + A +V VVG H +G+ +++L +P+ K
Sbjct: 186 LHERNAFMAEKI--KALSEQEIVIVVGAAHTEGLIESLNHEHSLYELNQVPAKK 237
>gi|344207098|ref|YP_004792239.1| TraB family protein [Stenotrophomonas maltophilia JV3]
gi|343778460|gb|AEM51013.1| TraB family protein [Stenotrophomonas maltophilia JV3]
Length = 406
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 117/238 (49%), Gaps = 15/238 (6%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS+ S VE ID + V +EL R+ L+ P L + E++ +
Sbjct: 30 LLGTAHVSRASVEAVEKAIDSGRFDTVAVELDPQRLQALSDPDTLAKLDLVEVIRKGRVA 89
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S + ++A L+I PG+E + A E A + V L DR V +T RR +++
Sbjct: 90 LFAANLALSAYQRRLAEQLDIEPGAELKRAVELARERNLPVHLIDREVGLTFRRASQRLG 149
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL+ A S E ++++ DML E + P L ET++ ERD
Sbjct: 150 FFGKLKLVAGL--GAGLFSSEEVGENEIEKLKQGDMLESSFGEFASESPALYETIIGERD 207
Query: 326 QYMSSTLLKVATEHS----SVVAVVGKGHLQGIKNYW----KQPVPVH-DLMTIPSPK 374
+YM++ L + EH V+AVVG GHL G+ Y + P P+ +L +P +
Sbjct: 208 RYMATRLRE---EHDPQQREVLAVVGAGHLAGLARYLETDTEAPAPLRAELEAVPKKR 262
>gi|58616131|ref|YP_195767.1| PrgY [Enterococcus faecalis]
gi|217388430|ref|YP_002333460.1| pheromone cCF10 shut down protein [Enterococcus faecalis]
gi|229547286|ref|ZP_04436011.1| PrgY family protein [Enterococcus faecalis TX1322]
gi|256959506|ref|ZP_05563677.1| PrgY [Enterococcus faecalis DS5]
gi|307290212|ref|ZP_07570129.1| TraB family protein [Enterococcus faecalis TX0411]
gi|384519626|ref|YP_005706930.1| TraB family protein [Enterococcus faecalis 62]
gi|422696932|ref|ZP_16754881.1| TraB family protein [Enterococcus faecalis TX1346]
gi|422720224|ref|ZP_16776844.1| TraB family protein [Enterococcus faecalis TX0017]
gi|422735567|ref|ZP_16791836.1| TraB family protein [Enterococcus faecalis TX1341]
gi|424756339|ref|ZP_18184161.1| TraB family protein [Enterococcus faecalis R508]
gi|58372082|gb|AAA25555.2| PrgY [Enterococcus faecalis]
gi|216409973|dbj|BAH02408.1| pheromone cCF10 shut down protein [Enterococcus faecalis]
gi|229307621|gb|EEN73608.1| PrgY family protein [Enterococcus faecalis TX1322]
gi|256950002|gb|EEU66634.1| PrgY [Enterococcus faecalis DS5]
gi|306498738|gb|EFM68238.1| TraB family protein [Enterococcus faecalis TX0411]
gi|315032502|gb|EFT44434.1| TraB family protein [Enterococcus faecalis TX0017]
gi|315167610|gb|EFU11627.1| TraB family protein [Enterococcus faecalis TX1341]
gi|315174565|gb|EFU18582.1| TraB family protein [Enterococcus faecalis TX1346]
gi|323481768|gb|ADX81205.1| TraB family protein [Enterococcus faecalis 62]
gi|402408470|gb|EJV40935.1| TraB family protein [Enterococcus faecalis R508]
Length = 384
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 126/248 (50%), Gaps = 17/248 (6%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNLKVPTVGEMVDMW 202
++ LVGTAH+S ES V+ II+ P VV LE SR L P + ++V +
Sbjct: 13 EIILVGTAHISSESAELVKNIIEEENPDVVCLEWDQSRYDKYLNPDEW---SDTDIVQVI 69
Query: 203 KKKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K+K T ++Y +A + G+EF A A K G K+ L DR Q+T +R
Sbjct: 70 KQKRLTVLISSVIYKLIQKHLAKINDSVAGAEFFEAVSSAEKVGAKIALVDRDSQVTFKR 129
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
W +PL K L Y+ F + + E MLK ++ + + +++ +A+P L +
Sbjct: 130 FWRLIPLRKKALLPYA--FGSVLEGAEESEEEMLKLLNS-ENFEPIFEQLQEAYPELWKV 186
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK--QPVPVHDLMTIPSPKPAV 377
L+ ERDQY++ + E +V V+G+ HL+G++ K Q + + +L T+P P +
Sbjct: 187 LLVERDQYLAQKI--SDQEAGKIVVVIGQAHLRGVEKNLKSNQQINIKELETLP---PKL 241
Query: 378 SALKVLSS 385
+ KVL S
Sbjct: 242 WSTKVLES 249
>gi|325981384|ref|YP_004293786.1| TraB family protein [Nitrosomonas sp. AL212]
gi|325530903|gb|ADZ25624.1| TraB family protein [Nitrosomonas sp. AL212]
Length = 413
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 111/223 (49%), Gaps = 9/223 (4%)
Query: 137 TAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML-TPQNLKVPTV 195
T + C + L+GTAHVSK S +V+ +I V +ELC SR ++ P + +
Sbjct: 24 TVKVNNCSITLLGTAHVSKASADKVQELIATGNYDAVAVELCPSRHKVIVNPDAMARMDL 83
Query: 196 GEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQI 255
+++ + + F ++A I PG+E RVA +A V+L DR +
Sbjct: 84 FQVIKKGQASMVAASLALGAFQQRMAEQFGIEPGAEMRVAIRDAQAAKLPVLLIDREIGT 143
Query: 256 TLRRTWEKMPLWHKIKLLYSFLFQAFFLP--SAEDLNRMLKEMDDVDMLTLVIQEMSKAF 313
T++R + +P W ++ L + SAE++ + LKE D+L + ++
Sbjct: 144 TMKRIYHNVPWWKRMNLFAGLIASVISKEKFSAEEIEK-LKEG---DVLESSFSQFAENE 199
Query: 314 PTLMETLVHERDQYMSSTLLKVATE--HSSVVAVVGKGHLQGI 354
L L+ ERD+YMS+ LLK + E + ++AV+G GHL G+
Sbjct: 200 KDLFHPLISERDEYMSARLLKESKENNYQHILAVIGAGHLNGM 242
>gi|422724214|ref|ZP_16780698.1| TraB family protein [Enterococcus faecalis TX2137]
gi|424694187|ref|ZP_18130595.1| TraB family protein [Enterococcus faecalis ERV37]
gi|424699013|ref|ZP_18135256.1| TraB family protein [Enterococcus faecalis ERV41]
gi|424704795|ref|ZP_18140886.1| TraB family protein [Enterococcus faecalis ERV63]
gi|424712497|ref|ZP_18144677.1| TraB family protein [Enterococcus faecalis ERV65]
gi|424718643|ref|ZP_18147880.1| TraB family protein [Enterococcus faecalis ERV68]
gi|424721165|ref|ZP_18150260.1| TraB family protein [Enterococcus faecalis ERV72]
gi|424724399|ref|ZP_18153347.1| TraB family protein [Enterococcus faecalis ERV73]
gi|424754930|ref|ZP_18182822.1| TraB family protein [Enterococcus faecalis ERV93]
gi|315025802|gb|EFT37734.1| TraB family protein [Enterococcus faecalis TX2137]
gi|402369728|gb|EJV03993.1| TraB family protein [Enterococcus faecalis ERV41]
gi|402371639|gb|EJV05788.1| TraB family protein [Enterococcus faecalis ERV37]
gi|402380639|gb|EJV14388.1| TraB family protein [Enterococcus faecalis ERV65]
gi|402381004|gb|EJV14733.1| TraB family protein [Enterococcus faecalis ERV68]
gi|402381009|gb|EJV14737.1| TraB family protein [Enterococcus faecalis ERV63]
gi|402392172|gb|EJV25444.1| TraB family protein [Enterococcus faecalis ERV72]
gi|402395202|gb|EJV28317.1| TraB family protein [Enterococcus faecalis ERV73]
gi|402401787|gb|EJV34534.1| TraB family protein [Enterococcus faecalis ERV93]
Length = 384
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 126/248 (50%), Gaps = 17/248 (6%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNLKVPTVGEMVDMW 202
++ LVGTAH+S ES V+ II+ P VV LE SR L P + ++V +
Sbjct: 13 EIILVGTAHISSESAELVKNIIEEENPDVVCLEWDQSRYDKYLNPDEW---SDTDIVQVI 69
Query: 203 KKKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K+K T ++Y +A + G+EF A A K G K+ L DR Q+T +R
Sbjct: 70 KQKRLTVLISSVIYKLIQKHLAKINDSVAGAEFFEAVGSAKKVGAKIALVDRDSQVTFKR 129
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
W +PL K L Y+ F + + E MLK ++ + + +++ +A+P L +
Sbjct: 130 FWRLIPLRKKALLPYA--FGSVLEGAEESEEEMLKLLNS-ENFEPIFEQLQEAYPELWKV 186
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK--QPVPVHDLMTIPSPKPAV 377
L+ ERDQY++ + E +V V+G+ HL+G++ K Q + + +L T+P P +
Sbjct: 187 LLVERDQYLAQKI--SDQEAGKIVVVIGQAHLRGVEKNLKSNQQINIKELETLP---PKL 241
Query: 378 SALKVLSS 385
+ KVL S
Sbjct: 242 WSTKVLES 249
>gi|310827294|ref|YP_003959651.1| TraB family protein [Eubacterium limosum KIST612]
gi|308739028|gb|ADO36688.1| TraB family protein [Eubacterium limosum KIST612]
Length = 389
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 116/231 (50%), Gaps = 9/231 (3%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+GTAHVS S EV+ +I+ P V +EL + R + + T ++V + K
Sbjct: 15 EIILIGTAHVSPTSVSEVKDLIESECPDSVCIELDAGRYESMNQKEQWADT--DIVKVIK 72
Query: 204 KKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
F I+ S + K+A +I G E E A K G +++L DR +Q+T R
Sbjct: 73 AGKAGFLFANIILSNYQRKLAEQFDIRSGQEMMQGIESAEKCGAQLVLADRSIQVTFNRI 132
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W+ LW K+KLL + + + E L+E+ DML+ + E+ +F + + L
Sbjct: 133 WKGCSLWEKMKLLTTIIMSI--IDDEEITEEELEELKTEDMLSAALSELGNSFKGVKKYL 190
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
V ERDQY++ + + VVAV+G H+ GI+ + + +L ++P
Sbjct: 191 VDERDQYLAYKIKNAPGKK--VVAVLGAAHVPGIREELYKDQDIAELESLP 239
>gi|410459454|ref|ZP_11313204.1| hypothetical protein BAZO_09716 [Bacillus azotoformans LMG 9581]
gi|409930190|gb|EKN67193.1| hypothetical protein BAZO_09716 [Bacillus azotoformans LMG 9581]
Length = 388
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 12/232 (5%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKKK 205
L+GTAH+SK S +V+ +I+ KP V +EL R S++ K + +++ K
Sbjct: 18 LIGTAHISKNSAEQVKEVIEVEKPDSVCVELDQQRYQSIIEGTKWKEMDIIQVIKEKKAT 77
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S F ++A I G E E A + G +++L DR +Q+T R W +
Sbjct: 78 LLLINLAVSSFQNRMAKQFGIKAGQEMIQGIESAKEMGAELVLADRNIQVTFSRIWGNLG 137
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHER 324
L K LL + F S E ++ L++M + D + ++ E ++ FP L + LV ER
Sbjct: 138 LKGKSILLSQIIASIF---STETISEEELEKMKNQDTINAILNEFTETFPQLKKPLVDER 194
Query: 325 DQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDL--MTIPSPK 374
DQY++ + E +VAV+G H+ GI K+ HDL +T+ PK
Sbjct: 195 DQYLAQKIKDAPGE--KIVAVLGAAHVPGIT---KEIHKEHDLKQLTVLPPK 241
>gi|399908751|ref|ZP_10777303.1| pheromone shutdown protein [Halomonas sp. KM-1]
Length = 414
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 5/229 (2%)
Query: 139 EGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGE 197
E G L+GTAHVS ES +V +I + V +ELC +R L+ P L + E
Sbjct: 25 EVGETRYTLLGTAHVSAESAEDVRRMIRSGEFDAVAIELCDARHHNLSNPDALAQQDLFE 84
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ K + F +VA I PG+E R A +EA + ++L DR V +TL
Sbjct: 85 IFRQGKAGMVAANLALGAFQQRVAEQSGIEPGAEMRAALDEARAHDLPLLLVDRDVGVTL 144
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLM 317
+R + +P W ++ L L + E ++ + + D+L E + L
Sbjct: 145 KRIYHNVPWWQRMSLFTGLL--GSVMSRQEVKPEEIERLKEGDVLESTFSEFAAESEALY 202
Query: 318 ETLVHERDQYMSSTLLKVA--TEHSSVVAVVGKGHLQGIKNYWKQPVPV 364
L+ ERD+YM L + A + +V+ V+G GH++G+ + + P+P
Sbjct: 203 TPLITERDRYMVLRLAEQAPPGRYRNVLVVIGAGHMKGMVEHLEAPLPA 251
>gi|357417745|ref|YP_004930765.1| trab family membrane protein [Pseudoxanthomonas spadix BD-a59]
gi|355335323|gb|AER56724.1| trab family membrane protein [Pseudoxanthomonas spadix BD-a59]
Length = 410
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 9/215 (4%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS+ S V+ ID V +EL + R+ L+ P L + +++ +
Sbjct: 35 LLGTAHVSRASVDAVQHAIDSHPYDAVAVELDTQRLQALSDPDALAKLDLVQVIRKGRVA 94
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A + G V L DR V +T +R K+
Sbjct: 95 LFAANLALAAYQRRLAEQLGIEPGAELKRAVAAAHERGMAVHLIDREVGLTFKRASAKLG 154
Query: 266 LWHKIKL---LYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
+ K+KL L LF + + AE ++++ DML E ++ P L E ++
Sbjct: 155 FFGKLKLGTSLLGGLFASEHVGEAE-----IEQLKRGDMLEASFGEFARESPALFEAVIA 209
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNY 357
ERD+YM+++L + A V+AVVG GHLQG+ +
Sbjct: 210 ERDRYMAASLRQHAGTAREVLAVVGAGHLQGLARH 244
>gi|422708786|ref|ZP_16766308.1| TraB family protein [Enterococcus faecalis TX0027]
gi|315036627|gb|EFT48559.1| TraB family protein [Enterococcus faecalis TX0027]
Length = 384
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 126/248 (50%), Gaps = 17/248 (6%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNLKVPTVGEMVDMW 202
++ LVGTAH+S ES V+ II+ P VV LE SR L P + ++V +
Sbjct: 13 EIILVGTAHISSESAELVKNIIEEENPDVVCLEWDQSRYDKYLNPDEW---SDTDIVQVI 69
Query: 203 KKKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K+K T ++Y +A + G+EF A A K G K+ L DR Q+T +R
Sbjct: 70 KQKRLTVLISSVIYKLIQKHLAKINDSVAGAEFFEAVSSAKKVGAKIALVDRDSQVTFKR 129
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
W +PL K L Y+ F + + E MLK ++ + + +++ +A+P L +
Sbjct: 130 FWRLIPLRKKALLPYA--FGSVLEGAEESEEEMLKLLNS-ENFEPIFEQLQEAYPELWKV 186
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK--QPVPVHDLMTIPSPKPAV 377
L+ ERDQY++ + E +V V+G+ HL+G++ K + + + +L T+P P +
Sbjct: 187 LLVERDQYLAQKI--SDQEAGKIVVVIGQAHLRGVEKNLKSNKQINIKELETLP---PKL 241
Query: 378 SALKVLSS 385
+ KVL S
Sbjct: 242 WSTKVLES 249
>gi|381210684|ref|ZP_09917755.1| pheromone shutdown protein [Lentibacillus sp. Grbi]
Length = 388
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 118/233 (50%), Gaps = 14/233 (6%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKH 206
L+GTAHVSK S +V+ +I+ +P V +EL R + +T N ++ + K+K
Sbjct: 18 LIGTAHVSKSSAEQVKEVIEAEQPDAVCIELDEQRYNSVTEGNKWRDM--DIFQVIKEKK 75
Query: 207 NTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
T ++ S F ++A I G E E A + +++L DR +QIT R W
Sbjct: 76 ATLLLMNLVISSFQKRMAKQFGINAGQEMIQGIESAKETSAELVLADRDIQITFSRIWGN 135
Query: 264 MPLWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
+ K LL +F + F S E ++ L+++ DML +++E ++ FP L + L+
Sbjct: 136 IGFKGKAMLLMQ-VFGSIF--SRETISEEELEKLKSKDMLDSMLEEFTEHFPRLKKPLID 192
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKP 375
ERDQY+S + + + VVAV+G H+ GI KQ H+L + + P
Sbjct: 193 ERDQYLSEKIRRAPG--NKVVAVLGAAHVPGITKEIKQE---HNLERLNARPP 240
>gi|307717856|ref|YP_003873388.1| TraB family protein [Spirochaeta thermophila DSM 6192]
gi|306531581|gb|ADN01115.1| TraB family protein [Spirochaeta thermophila DSM 6192]
Length = 397
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 137/271 (50%), Gaps = 33/271 (12%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQ----NLKVPTVGEMV 199
++ LVGTAHVSK+S +V +I P V +E+ R+S+L + NL V V
Sbjct: 19 EIILVGTAHVSKQSVEDVRVVIREEAPDGVCVEIDPQRLSVLRQEERWTNLDVYRV---- 74
Query: 200 DMWKKKHNTFGIL----YSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQI 255
++ F +L S F ++ + PG E + A E A + G DR VQ+
Sbjct: 75 ---LREGRGFMLLANLVLSSFQRRIGLETGVKPGEEMKAAVESAEELGIPYHTCDRDVQV 131
Query: 256 TLRRTWEKMPLWHKIKLLYSFLFQAFFLP--SAEDLNRMLKEMDDVDMLTLVIQEMSKAF 313
TLRR W + LW + KLL + L AF SA+++ R+ + D L +++E++
Sbjct: 132 TLRRAWARTSLWGRAKLLAALLASAFEDEKISADEVERLKR----TDALQAMMEELASYL 187
Query: 314 PTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK------QPVPVHDL 367
P + E L+ ERD Y++ + + + +VAVVG GHL+G+ + + + V DL
Sbjct: 188 PEVKEVLIDERDVYLARRIWE--SPGRKLVAVVGAGHLEGVVRHLERCAAGDEGVAFGDL 245
Query: 368 MTIPSPKPAVSALKVLSSLGVAVAGVAIISG 398
T+P P+ A +V+ L AV V +I+G
Sbjct: 246 ETVP---PSGRAGRVVGWLIPAVV-VGLIAG 272
>gi|407796331|ref|ZP_11143286.1| TraB family protein [Salimicrobium sp. MJ3]
gi|407019333|gb|EKE32050.1| TraB family protein [Salimicrobium sp. MJ3]
Length = 390
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 119/244 (48%), Gaps = 21/244 (8%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMW 202
++ L+GTAHVS+ S +V+ +++ +P V +EL R S++ + + +++
Sbjct: 17 EIVLIGTAHVSRASALQVKEVVEQEEPDSVCVELDEQRYHSVVEGNQWRNMDIFQIIKEK 76
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K + S F ++A I G E E A G +++L DR +Q+T R W
Sbjct: 77 KATLLLMNLAISSFQKRMAEQFGIKAGQEMIQGIESAEASGAELVLADRNIQLTFARIWG 136
Query: 263 KMPLWHKIKLLYSFLFQAFFLP---SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
+ K KL+ S LF F S EDL +M ++ DML ++++ S FP L +
Sbjct: 137 NLGFKGKAKLMLS-LFAGIFSKESISEEDLEKMKEQ----DMLDAMLEDFSDNFPRLKQP 191
Query: 320 LVHERDQYMSSTLLKVATE-HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTI-----PSP 373
L+ ERDQY++ K+ T VVAV+G H+ GI K+ HDL + SP
Sbjct: 192 LIDERDQYLAE---KIRTAPGKKVVAVLGAAHVPGIT---KEVHREHDLEALKERPKKSP 245
Query: 374 KPAV 377
P +
Sbjct: 246 WPKI 249
>gi|300814712|ref|ZP_07094962.1| TraB family protein [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511185|gb|EFK38435.1| TraB family protein [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 387
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 115/240 (47%), Gaps = 14/240 (5%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+ TAHVS ES + V+ I+ P + +EL R +T N K ++D+ K
Sbjct: 14 EIVLIPTAHVSTESVKLVKETIEEFNPDSICVELDKDRYKNIT--NPKAWKNTNIIDVIK 71
Query: 204 KKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
K T ++ S + A +A L PG+E + A + ++L DR ++ T R
Sbjct: 72 DKKVTLLIVNLVLSAYQANIAKKLNTRPGAEMMQGIKSANELNKNLVLADRNIKTTFMRI 131
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLP--SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
W KM K + ++S +F S EDL ++K + L V+ +M K +P + +
Sbjct: 132 WRKMKFKEKCRFIFSMIFAKDESDDISEEDLEELIKR----ENLENVVIDMGKEYPQIAQ 187
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVS 378
L+HERD+Y++ + + ++A++G H G++ + +L +P PK S
Sbjct: 188 VLLHERDKYLAYKIKN--AKGKKILAILGAAHSLGVEKEIFNEYDIKELDEVP-PKTTFS 244
>gi|282882111|ref|ZP_06290752.1| TraB family protein [Peptoniphilus lacrimalis 315-B]
gi|281298141|gb|EFA90596.1| TraB family protein [Peptoniphilus lacrimalis 315-B]
Length = 387
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 118/239 (49%), Gaps = 12/239 (5%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++ L+ TAHVS ES + V+ I+ P + +EL R +T N K ++D+ K
Sbjct: 14 EIVLIPTAHVSTESVKLVKETIEEFNPDSICVELDKDRYKNIT--NPKAWKNTNIIDVIK 71
Query: 204 KKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
K T ++ S + A +A L+ PG+E + A + ++L DR ++ T R
Sbjct: 72 DKKVTLLIVNLVLSAYQANIAKKLKTKPGAEMMQGIKSANELNKNLVLADRNIKTTFIRI 131
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMET 319
W KM K + ++S +F +ED++ L+E+ + L V+ +M K +P + +
Sbjct: 132 WRKMKFKEKCRFIFSMIFAK---DESEDISEEDLEELIKRENLENVVIDMGKEYPQIAQV 188
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVS 378
L+HERD+Y++ + + ++A++G H G++ + +L +P PK S
Sbjct: 189 LLHERDKYLAYKIKN--AKGKKILAILGAAHSLGVEKEIFNEYDIKELDEVP-PKTTSS 244
>gi|88810827|ref|ZP_01126084.1| Pheromone shutdown protein [Nitrococcus mobilis Nb-231]
gi|88792457|gb|EAR23567.1| Pheromone shutdown protein [Nitrococcus mobilis Nb-231]
Length = 399
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 7/226 (3%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMV 199
G L+GTAHVS+ S EVE I V +ELC+ R L P L+ + +++
Sbjct: 16 GDTAFTLLGTAHVSRTSVTEVEDAIACGNFDAVAVELCTQRYRALDEPDALERLDLFQVL 75
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K + + F ++A PG+E A + A + L DR + ITL+R
Sbjct: 76 RGGKVGLVAASLALAAFQQRLADQFGTRPGAEMEAAIKRADAANLPIWLVDRDISITLKR 135
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLME 318
++++P W + LL + + S E + ++ + + D+L + ++ L E
Sbjct: 136 IYQRIPWWQRFTLLSGLIVSSL---SREKITEAEIERLKEGDLLESTFADFAERSALLYE 192
Query: 319 TLVHERDQYMSSTLLKVATEH--SSVVAVVGKGHLQGIKNYWKQPV 362
TL+ ERDQY+++ LL+ A + ++V+ V+G GHL G++ +P+
Sbjct: 193 TLITERDQYIAARLLQKAQQSQPTNVLVVIGAGHLTGVEAALHEPM 238
>gi|121996824|ref|YP_001001611.1| TraB family protein [Halorhodospira halophila SL1]
gi|121588229|gb|ABM60809.1| TraB family protein [Halorhodospira halophila SL1]
Length = 399
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 118/222 (53%), Gaps = 16/222 (7%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKH 206
L+GTAH+S+ S EV+ + V +ELC SR+ + + P E +D+++
Sbjct: 22 LLGTAHISQASTEEVQREVASGAYDAVAIELCESRL-----RAFREPDHLERMDLFQTLR 76
Query: 207 NTFGILYSWFLA------KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ G L LA ++A L + PG+E + A A +YG ++L DR V +T+RR
Sbjct: 77 DGRGGLVMASLALGAYQQRLAEQLGVDPGAEMKAAAAGAEQYGADLVLVDREVGVTMRRL 136
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDL-NRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
+ +P W + L+ + L S++ + + ++ + D+L +E++++ L +
Sbjct: 137 YRNVPWWQRFGLIGGLIGS---LASSQRISSEEVERLKQGDLLESTFRELAQSSRALYQP 193
Query: 320 LVHERDQYMSSTLLK-VATEHSSVVAVVGKGHLQGIKNYWKQ 360
L+ ERD+YM++ LL+ A + V+ V+G GHL+G+ Y Q
Sbjct: 194 LIDERDRYMAARLLESAAGRYKRVLVVLGAGHLEGVTRYLGQ 235
>gi|410679192|ref|YP_006931594.1| pheromone shutdown protein [Borrelia afzelii HLJ01]
gi|408536580|gb|AFU74711.1| pheromone shutdown protein [Borrelia afzelii HLJ01]
Length = 370
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 114/214 (53%), Gaps = 15/214 (7%)
Query: 153 VSKESCREVEAIIDFLKPQVVFLELCSSRVSML--TPQNLKVPTVGEMVDMWKKKHNTF- 209
+SK+S + +I+ LKP + +EL +R + T +N K + +D ++ F
Sbjct: 1 MSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTDENEKWRNLD--IDKALRQGKAFF 58
Query: 210 ---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPL 266
I+ F K+A I PG E + A +A K+ +IL DR ++ TL+R W +P+
Sbjct: 59 LIINIILGNFQKKLAKEQGIKPGEEMKTAILKAKKHNIPLILADRKIETTLKRAWISIPI 118
Query: 267 WHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQ 326
+ KIK++ S F L + ++++ + D L+ V++E+SK P + + L+ ERD+
Sbjct: 119 FEKIKIISSL----FSLTDTKITKDEIEKLKEQDALSKVMEELSKEIPKVKKALIDERDE 174
Query: 327 YMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
++++ +L+ ++A+VG GH+ GI K+
Sbjct: 175 FITNKILE---GKGIILAIVGAGHVNGIMRTLKE 205
>gi|77164061|ref|YP_342586.1| pheromone shutdown protein [Nitrosococcus oceani ATCC 19707]
gi|254436257|ref|ZP_05049764.1| TraB family protein [Nitrosococcus oceani AFC27]
gi|76882375|gb|ABA57056.1| Pheromone shutdown protein [Nitrosococcus oceani ATCC 19707]
gi|207089368|gb|EDZ66640.1| TraB family protein [Nitrosococcus oceani AFC27]
Length = 401
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 11/223 (4%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMW 202
+ L+GTAHVS+ S V+A++ V +ELC SR +++ P L + E++
Sbjct: 19 QITLLGTAHVSRASAEHVKALLATGDYDAVAVELCPSRYQALINPNALSRMDLLEVLRKG 78
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K T + + ++A I PG+E R A + A V+L DR V TL+R +
Sbjct: 79 KAAMVTASLALGAYQQRIAEQFGIEPGAEMRAAVDSAHSAKLPVLLIDREVGTTLKRIYR 138
Query: 263 KMPLWHKIKLLYSFLFQAFF---LPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
+P W + L+ LF + S E++ R LKE D+L + + L
Sbjct: 139 NVPWWQRFNLI-GGLFASLISRDTVSEEEVER-LKEG---DVLETTFSQFAMEAENLYLP 193
Query: 320 LVHERDQYMSSTLLKV--ATEHSSVVAVVGKGHLQGIKNYWKQ 360
L+ ERD+YM++ L + E+ ++ V+G GHL+G+ Y +Q
Sbjct: 194 LIDERDRYMAARLREEINQNEYRHLLGVIGAGHLRGVTRYLEQ 236
>gi|300115084|ref|YP_003761659.1| TraB family protein [Nitrosococcus watsonii C-113]
gi|299541021|gb|ADJ29338.1| TraB family protein [Nitrosococcus watsonii C-113]
Length = 401
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 11/223 (4%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMW 202
+ L+GTAHVS+ S V+A++ V +ELC SR +++ P L + E++
Sbjct: 19 QITLLGTAHVSRASAEHVKALLATGDYDAVAVELCPSRYQALINPNALSRMDLLEVLRKG 78
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K T + + ++A I PG+E R A + A V+L DR V TL+R +
Sbjct: 79 KAAMVTASLALGAYQQRIAEQFGIEPGAEMRAAVDSAHSAKLPVLLIDREVGTTLKRIYR 138
Query: 263 KMPLWHKIKLLYSFLFQAFF---LPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
+P W + L+ LF + S E++ R LKE D+L + + L
Sbjct: 139 NVPWWQRFNLI-GGLFASLMSRDTVSEEEVER-LKEG---DVLETTFSQFAMEAENLYLP 193
Query: 320 LVHERDQYMSSTLLK--VATEHSSVVAVVGKGHLQGIKNYWKQ 360
L+ ERD+YM++ L + E+ ++ V+G GHL+G+ Y +Q
Sbjct: 194 LIDERDRYMAARLREEMNQNEYRHLLGVIGAGHLRGVTRYLEQ 236
>gi|431929573|ref|YP_007242619.1| pheromone shutdown-related protein TraB [Thioflavicoccus mobilis
8321]
gi|431827876|gb|AGA88989.1| pheromone shutdown-related protein TraB [Thioflavicoccus mobilis
8321]
Length = 407
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 119/249 (47%), Gaps = 14/249 (5%)
Query: 134 CDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKV 192
D + EG ++ L+GTAHVS+ S V +ID + + +ELC SR +++ P +L
Sbjct: 20 IDLSLEG--SEITLLGTAHVSRASADMVRNLIDEGQYDAIAVELCRSRYNALMDPASLSR 77
Query: 193 PTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRP 252
+ ++ + + S + ++A I G+E R A A + ++L DR
Sbjct: 78 MDLFSVIRERRVYMVVASLALSAYQQRLADQFGIEAGAEQRTAVRMAQERDLAMLLIDRE 137
Query: 253 VQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMSK 311
V +TLRR M W + L F+ + S ED+ ++ + + D+L E+++
Sbjct: 138 VGVTLRRLVRNMSWWRRYTL---FVGLVLAMVSREDITEEEIERLKEGDVLETTFAELAE 194
Query: 312 AFPTLMETLVHERDQYMSSTLLKVATE--HSSVVAVVGKGHLQGIKNYWKQ-----PVPV 364
L L+ ERD+YM++ L E + V+AVVG GHL+G+ + + V
Sbjct: 195 DRRDLFVPLIEERDRYMAAKLRAEIAEKGYRRVLAVVGAGHLEGVARHLRADGGNPAASV 254
Query: 365 HDLMTIPSP 373
DL +P P
Sbjct: 255 RDLEEVPPP 263
>gi|383316197|ref|YP_005377039.1| pheromone shutdown-related protein TraB [Frateuria aurantia DSM
6220]
gi|379043301|gb|AFC85357.1| pheromone shutdown-related protein TraB [Frateuria aurantia DSM
6220]
Length = 413
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 120/267 (44%), Gaps = 13/267 (4%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKKK 205
++GTAHVS S V+ IID + + +ELC SR SM P+ + + +++ K
Sbjct: 31 VLGTAHVSPASVAAVKTIIDTERFDAIAVELCPSRAASMRDPEAFRQMDLFQVIRQGKTG 90
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
++ S F ++A I PG+E A + A + L DR V TLRR W +
Sbjct: 91 LVAASLILSSFQKRLADQYGIEPGAEMLAAMDGAEAQHRPLWLVDRTVSTTLRRAWHNVG 150
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
W ++ L L F +E + ++++ D+L E + L +L+ ERD
Sbjct: 151 WWQRMGLAGGLLGSVF--DRSEVPQQDIEQLKQRDLLEGAFSEFASQSEPLYRSLIAERD 208
Query: 326 QYMSSTLLKVATE--------HSSVVAVVGKGHLQG-IKNYWKQPVPVHDLMTIPSPKPA 376
YM++ L + A V+ V+G GHLQG ++ +Q P +L PA
Sbjct: 209 SYMAARLREEAASLPPRDDGVRRKVLVVIGAGHLQGLVRQIREQQQPPVELCRQLDETPA 268
Query: 377 VSALKVLSSLGVAVAGVAIIS-GIYIN 402
+ +LG+ +A A I Y N
Sbjct: 269 PARWPKWLALGLVLAIFATIGYAFYRN 295
>gi|374316305|ref|YP_005062733.1| pheromone shutdown-related protein TraB [Sphaerochaeta pleomorpha
str. Grapes]
gi|359351949|gb|AEV29723.1| pheromone shutdown-related protein TraB [Sphaerochaeta pleomorpha
str. Grapes]
Length = 397
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK- 203
+ LVGTAHVSKES EV + ID KP + LEL R +N + +D+ K
Sbjct: 21 ILLVGTAHVSKESVNEVASYIDSEKPDHICLELDDGRF-----KNKEDEGSWSNMDIKKV 75
Query: 204 -KKHNTFGILYSWFLA----KVASHLEIFPGSEF----RVAFEEAMKYGGKVILGDRPVQ 254
K+ F ++ + LA ++ + PG E R+A E+ + Y L DR +Q
Sbjct: 76 LKEKKGFLLITNMALASFQKRMGNQSGSAPGEEILGAARIAKEKEIPYS----LCDREIQ 131
Query: 255 ITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFP 314
IT +R W K LW+K KL+ + + F E L+E+ D++ ++ EM+K P
Sbjct: 132 ITFKRAWRKSNLWNKAKLIATIISAVF--SKEEISEAELEELKKSDVMQGMLDEMAKELP 189
Query: 315 TLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVH---DLMTIP 371
+ L+ ERD+Y+++++ + + ++AV+G GH GI + ++ DL I
Sbjct: 190 AVKTVLIDERDRYLATSIYQAPG--TKILAVIGAGHQNGIISCMQKLEDKQLSADLSEIT 247
Query: 372 SPKPAVSALKVLS 384
PA A K+LS
Sbjct: 248 EIPPAGKAGKILS 260
>gi|406888284|gb|EKD34814.1| hypothetical protein ACD_75C02178G0006 [uncultured bacterium]
Length = 401
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 109/216 (50%), Gaps = 15/216 (6%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVGEMVD 200
V LVGTAH+S+ES V+ +I+ +P + LEL R LT Q L + T+
Sbjct: 28 VVLVGTAHISQESVDLVKTVIEQEQPDCICLELDDKRYHALTQKQQWQALNLKTI----- 82
Query: 201 MWKKKHNTF--GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
+ K+ +T +L + + ++ + + PG+E +A + A + V L DR V+ITLR
Sbjct: 83 IKNKQLSTLLISLLMASYQKRLGGQVGVTPGAELLMADQIAKELRIPVSLCDRDVRITLR 142
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R W+ K LL S L F + L+E+ D+LT ++ EM + P L
Sbjct: 143 RAWKSTSFLKKGYLLASLLTSLFDQSVISE--EKLRELKQKDVLTELMDEMGETLPDLKR 200
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGI 354
L+ ERD Y+ + ++ +VAVVG GHL G+
Sbjct: 201 VLIDERDTYLVEKI--KSSPGKRIVAVVGAGHLAGM 234
>gi|399923755|ref|ZP_10781113.1| hypothetical protein Prhi1_00870 [Peptoniphilus rhinitidis 1-13]
Length = 393
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 112/234 (47%), Gaps = 16/234 (6%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGE---MVD 200
++ L+ TAHVS ES V I P + +EL R +NLK P + ++D
Sbjct: 24 EIILIPTAHVSSESADLVRETIKEEDPDSICIELDDQRY-----KNLKNPDAWKNTNIID 78
Query: 201 MWKKKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ K+K T ++ S + +A L+ PG E + + + ++L DR +Q T
Sbjct: 79 IIKQKKVTLLIANLILSSYQKNIAKKLKTKPGQEMVEGIKASEEMRKDLVLADRDIQKTF 138
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLM 317
R W KM + +IKL +S + E L+++ + D L L I+ M K +P +
Sbjct: 139 MRIWRKMGFFERIKLFFSLMAVD---DDEEVSEEDLQKLIERDNLELAIENMGKDYPEIA 195
Query: 318 ETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
TL+HERD+Y++ + + V+A++G H G++ + + +L +P
Sbjct: 196 ATLLHERDKYLAYNIKNAPGK--KVIAILGAAHTPGVEKEIFKDQDIEELNKVP 247
>gi|389793634|ref|ZP_10196795.1| pheromone shutdown-related protein TraB [Rhodanobacter fulvus Jip2]
gi|388433267|gb|EIL90233.1| pheromone shutdown-related protein TraB [Rhodanobacter fulvus Jip2]
Length = 405
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 10/222 (4%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMV 199
G + ++GTAHVS+ S VEA++ V +ELC SR M P+ K + +++
Sbjct: 18 GGVEYVVLGTAHVSRSSMEAVEAMLAHESFDAVAVELCESRAQGMRDPEAFKQMDLFKVI 77
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K ++ S F ++A I PG+E + A + A + + L DR V TL+R
Sbjct: 78 REGKAGMVAASLVLSTFQKRLADQSGIQPGAEMKAAMDGAEQRHLPLWLIDREVGTTLKR 137
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
W + W + LL L F E + ++++ D+L E + L ++
Sbjct: 138 AWRSVGFWQRFGLLGGLLASVFEREQIEQVE--IEKLKQGDLLESAFSEFASESKPLYDS 195
Query: 320 LVHERDQYMSSTLLKVATEHSS-------VVAVVGKGHLQGI 354
L+ ERD +M++ L + + S+ V+ V+G GHL+G+
Sbjct: 196 LIGERDAFMAARLRQESARSSTSDTPARRVLVVIGAGHLKGL 237
>gi|374622591|ref|ZP_09695114.1| pheromone shutdown protein [Ectothiorhodospira sp. PHS-1]
gi|373941715|gb|EHQ52260.1| pheromone shutdown protein [Ectothiorhodospira sp. PHS-1]
Length = 404
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 11/228 (4%)
Query: 132 LTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNL 190
LT D T + ++GTAHVS+ S V ++ V +ELC SR ++L P L
Sbjct: 16 LTLDGT------RITVLGTAHVSRVSADTVSWLLRSGDFDAVAVELCPSRHHAILDPDAL 69
Query: 191 KVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGD 250
+ +++ K T + + ++A +I PG+E R A +EA V+L D
Sbjct: 70 SRMNLFQVLRQGKVPMVTASLALGAYQQRLAEQFDIEPGAEMRAAIDEARAAHLPVLLID 129
Query: 251 RPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMS 310
R V TL+R + +P W ++ L + A + + ++ + D+L + +
Sbjct: 130 REVGTTLKRCYRNVPWWRRMNLFTGLM--ASVVSKEKISEEEIERLKQGDVLESTFTQFA 187
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVATE--HSSVVAVVGKGHLQGIKN 356
+ L L+ ERD+YM++ L + A E + ++AVVG GHLQGI+
Sbjct: 188 EESRALYTPLIQERDEYMAARLRQEAREGQYRHILAVVGAGHLQGIRQ 235
>gi|451982532|ref|ZP_21930841.1| TraB family protein [Nitrospina gracilis 3/211]
gi|451760178|emb|CCQ92134.1| TraB family protein [Nitrospina gracilis 3/211]
Length = 398
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 111/221 (50%), Gaps = 6/221 (2%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNL-KVPTVGEMVDMWK 203
+ L+GTAHVS++S VE I V +ELC R + Q+ K + +++ K
Sbjct: 20 ITLLGTAHVSQKSVELVEEKIRTGDYDCVAVELCPPRYENMVNQSWWKNLDIYQILKSGK 79
Query: 204 KKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
+ S + ++A L I PG E A + A ++ ++ + DR + TL+R + +
Sbjct: 80 GSLLLINLALSAYQRRLADKLGIEPGKEMARAIDLATEHNLRLEVIDRDITTTLQRMYRR 139
Query: 264 MPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHE 323
+ W K+KL+ + F E ++ + + DML +++E + P + E L+ E
Sbjct: 140 VGFWQKLKLVGGMIASIFV--GEEVTEEQIENLKEGDMLQSLVEEFGEELPEIKEVLIDE 197
Query: 324 RDQYMSSTLLKVATEHSS---VVAVVGKGHLQGIKNYWKQP 361
RDQYM L+K+A + ++A+VG GHL G+ ++ P
Sbjct: 198 RDQYMVGKLVKLAETPDAPKNILALVGAGHLIGMVPAFESP 238
>gi|307105458|gb|EFN53707.1| hypothetical protein CHLNCDRAFT_58486 [Chlorella variabilis]
Length = 551
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Query: 218 AKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFL 277
A+++ L + G++F +A E A +++LGDRP++ITL+R W+ + W + L L
Sbjct: 178 ARLSGRLGVRGGADFVMAREGAKALSAQLVLGDRPIEITLQRAWDALS-WQQRGRLAQEL 236
Query: 278 FQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLL--KV 335
D+ + + DD D ++L+ Q++S+A+P L+ LVHERD Y++ +L K
Sbjct: 237 AGGMLAAQQLDVAAVERLKDD-DGVSLLFQQLSEAYPELVGPLVHERDLYLAWSLKRSKA 295
Query: 336 ATEHSSVVAVVGKGHLQGI 354
+VV V+GKGHL+G+
Sbjct: 296 VNGACAVVGVIGKGHLRGV 314
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML 185
+YLVGT+HVS S +V ++ ++P V +ELC SR +++
Sbjct: 55 LYLVGTSHVSSRSAEDVRRVVQAVQPDAVVVELCRSRQAVM 95
>gi|257420283|ref|ZP_05597277.1| PrgY protein [Enterococcus faecalis T11]
gi|257162111|gb|EEU92071.1| PrgY protein [Enterococcus faecalis T11]
Length = 385
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 19/272 (6%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
++ L+GT+H+S ES V I P + +E R +N+ P + D+
Sbjct: 13 SEIILIGTSHISAESADLVRKTIQEENPDTICIEWDQKRYK----KNIH-PDEWDDTDIV 67
Query: 203 KKKHN------TFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
K N FG++Y F KV+ + G EF VA EE+ K K L DR +T
Sbjct: 68 KIIKNKQFPVFIFGVIYKLFQKKVSQDMNSLVGKEFVVAVEESKKLNIKFYLIDRDSSLT 127
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
+R W + K+KL Y+F AE+ ++ + + + V +E+ +++P L
Sbjct: 128 FKRAWRMLNFREKVKLPYAF---GKIFEGAEETEEEVQNLLESENFEPVFEELKESYPNL 184
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK--QPVPVHDLMTIPSPK 374
E V ERD Y+++ + A + VAV+GK HL+G+ + K Q + L IP K
Sbjct: 185 WEVFVTERDDYLATKIQNTA--NGKTVAVLGKAHLKGVSDRLKNNQKSDLKKLEIIPPKK 242
Query: 375 PAVSALK-VLSSLGVAVAGVAIISGIYINCKK 405
L+ ++ + + + GV+ G + ++
Sbjct: 243 FGSKLLEWIVPGILLILLGVSFYQGTQVGIEQ 274
>gi|325972859|ref|YP_004249050.1| TraB family protein [Sphaerochaeta globus str. Buddy]
gi|324028097|gb|ADY14856.1| TraB family protein [Sphaerochaeta globus str. Buddy]
Length = 397
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 115/217 (52%), Gaps = 17/217 (7%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK- 203
+ L+GTAHVSKES EVE I+ +P + LEL R+ +N + + +D+ K
Sbjct: 21 LLLIGTAHVSKESVDEVELAIETEQPDHICLELDDGRM-----KNKEQESSWSNMDVKKV 75
Query: 204 -KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K++ F +L + LA ++ + PG E A + A + G L DR +Q+T +
Sbjct: 76 IKENKGFLLLANMALASFQKRMGNQSGSAPGQEILSAAKLAKEKGIPFSLCDREIQVTFK 135
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLM 317
R W K LW+K KL+ + + F S E ++ L+++ D++ ++ EM+K P++
Sbjct: 136 RAWRKSNLWNKAKLIATIISAVF---SKEKISEQELEDLKKADVMQNMMDEMAKELPSVK 192
Query: 318 ETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGI 354
L+ ERD+Y+++++ +AV+G GH G+
Sbjct: 193 TVLIDERDRYLATSIYLAPGLKK--LAVIGAGHQSGV 227
>gi|335434133|ref|ZP_08558937.1| TraB family protein [Halorhabdus tiamatea SARL4B]
gi|335434188|ref|ZP_08558990.1| TraB family protein [Halorhabdus tiamatea SARL4B]
gi|334898008|gb|EGM36130.1| TraB family protein [Halorhabdus tiamatea SARL4B]
gi|334898035|gb|EGM36155.1| TraB family protein [Halorhabdus tiamatea SARL4B]
Length = 499
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 120/295 (40%), Gaps = 72/295 (24%)
Query: 135 DSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPT 194
D +A GG + LVGTAHVS ES VE I+ +P VV +EL R ++ P
Sbjct: 9 DPSAPGGEGSIQLVGTAHVSAESADRVERTIEDEQPDVVAVELDEGRFRQFKGES---PD 65
Query: 195 VGEMVDMWKKKHNTFGILYSWFL----AKVASHLEIFPGSEFRVAFEEAMKYGGKVILGD 250
E D+ + + F L W L A++ ++ PG++ E A G V L D
Sbjct: 66 DIEASDL-LQGNTVFQFLAYWMLSYVQARLGDRFDVTPGADMMAGVETAEAEGIDVALVD 124
Query: 251 RPVQITLRRTWEK---------------------MPLWH---KIKLLYSFLFQAFFL--- 283
R +Q T++R W++ M W I L L AF L
Sbjct: 125 RDIQTTIQRFWKRLTGLEKLKLFGGMLVGVGGPWMAAWTVGLTIGLFVGVLGTAFGLSLT 184
Query: 284 -------PSAEDLNRML------------------------------KEMDDVDMLTLVI 306
PSA L+ +L +++ D D+++ ++
Sbjct: 185 SILGLGLPSAAVLDVVLLAGVVGTAIALLLLAAFSGSEDEDAEEFDIEQLTDTDVVSAMM 244
Query: 307 QEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP 361
+E + P E L+ ERD +++ L+ + E VVAVVG GH GI+ Y P
Sbjct: 245 EEFRRFSPGGAEALIDERDAFIAHQLVGLREEGYHVVAVVGAGHRAGIQRYLDDP 299
>gi|148672433|gb|EDL04380.1| TraB domain containing, isoform CRA_a [Mus musculus]
Length = 262
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 86/164 (52%), Gaps = 15/164 (9%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LPR+V L AE G+ VY+VGTAH S +S R+V I ++P VV +ELC RVSM
Sbjct: 98 LPRTVTQLV----AEDGS-RVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSM 152
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + V + K +++ L L KV++H L + PG EFR A
Sbjct: 153 LKMDERTLLREAKEVSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 212
Query: 236 FEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLF 278
F+EA K K LGDRP+ +T +R + W K+KL + F
Sbjct: 213 FKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCF 256
>gi|307292283|ref|ZP_07572144.1| TraB family protein [Enterococcus faecalis TX0411]
gi|306496638|gb|EFM66194.1| TraB family protein [Enterococcus faecalis TX0411]
Length = 385
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 19/246 (7%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
++ L+GT+H+S ES V I P ++ +E R +N+ P + D+
Sbjct: 13 SEIILIGTSHISAESADLVRKTIQEENPDIICIEWDQKRYK----KNIH-PDEWDDTDIV 67
Query: 203 KKKHN------TFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
K N FG++Y F KV+ + G EF VA +E+ K K L DR +T
Sbjct: 68 KIIKNKQFPVFIFGVIYKLFQKKVSQDMNSLVGKEFVVAVDESKKLNIKFYLIDRDSSLT 127
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
+R W + K+KL Y+F AE+ ++ + + + V +E+ +++P L
Sbjct: 128 FKRAWRMLNFREKVKLPYAF---GKIFEGAEETEEEVQNLLESENFEPVFEELKESYPNL 184
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK--QPVPVHDLMTIPSPK 374
E V ERD Y+++ + A + VAV+GK HL+G+ + K Q + L IP PK
Sbjct: 185 WEVFVTERDDYLATKIQNTA--NGKTVAVLGKAHLKGVSDRLKNNQKSDLQKLEIIP-PK 241
Query: 375 PAVSAL 380
S L
Sbjct: 242 KFGSKL 247
>gi|227555575|ref|ZP_03985622.1| pheromone shutdown protein TraB [Enterococcus faecalis HH22]
gi|424671188|ref|ZP_18108201.1| TraB family protein [Enterococcus faecalis 599]
gi|227175285|gb|EEI56257.1| pheromone shutdown protein TraB [Enterococcus faecalis HH22]
gi|402359359|gb|EJU93992.1| TraB family protein [Enterococcus faecalis 599]
Length = 385
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 19/246 (7%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
++ L+GT+H+S ES V I P + +E R +N+ P + D+
Sbjct: 13 SEIILIGTSHISAESADLVRKTIQEENPDTICIEWDQKRYK----KNIH-PDEWDDTDIV 67
Query: 203 KKKHN------TFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
K N FG++Y F KV+ + G EF VA +E+ K K L DR +T
Sbjct: 68 KIIKNKQFPVFIFGVIYKLFQKKVSQDMNSLVGKEFVVAVDESKKLNIKFYLIDRDSSLT 127
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
+R W + K+KL Y+F AE+ ++ + + + V +E+ +++P L
Sbjct: 128 FKRAWRMLNFREKVKLPYAF---GKIFEGAEETEEEVQNLLESENFEPVFEELKESYPNL 184
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK--QPVPVHDLMTIPSPK 374
E V ERD Y+++ + +A + VAV+GK HL+G+ + K Q + L IP PK
Sbjct: 185 WEVFVTERDDYLATKIQNIA--NGKTVAVLGKAHLRGVSDRLKNNQKSDLQKLEIIP-PK 241
Query: 375 PAVSAL 380
S L
Sbjct: 242 KFGSKL 247
>gi|456987362|gb|EMG22681.1| TraB family protein [Leptospira interrogans serovar Copenhageni
str. LT2050]
Length = 241
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 111/225 (49%), Gaps = 24/225 (10%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVG 196
G +V ++GTAH+S++S EV+ II KP V +ELC+SR+ L + L + V
Sbjct: 30 GKTNVTILGTAHISQKSIDEVQRIIRKEKPDTVCVELCNSRIRSLKDSEHWKKLDIFKVF 89
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ M+ + + L K + I PG E R+A E K G K++ DR V T
Sbjct: 90 KERKMYLLLSSLILSAFQKKLGKGS----IRPGDEMRMAIYEGEKIGAKIVPIDREVSTT 145
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMSKAFPT 315
L+R W + +++++ LL + L F ED++ ++EM D+L + ++ K + +
Sbjct: 146 LKRAWWNIGIFNRLFLLSALLTSLFV---KEDISEEKIEEMKSEDVLKDLFSQLPKRYES 202
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
+ ++ ERD Y++ + A E GK LQ W+Q
Sbjct: 203 IKNVIIDERDSYLAQKIRNSAKE--------GKKFLQS----WEQ 235
>gi|422711255|ref|ZP_16768187.1| TraB family protein [Enterococcus faecalis TX0027]
gi|422712103|ref|ZP_16768880.1| TraB family protein [Enterococcus faecalis TX0309A]
gi|422717085|ref|ZP_16773778.1| TraB family protein [Enterococcus faecalis TX0309B]
gi|315034748|gb|EFT46680.1| TraB family protein [Enterococcus faecalis TX0027]
gi|315574636|gb|EFU86827.1| TraB family protein [Enterococcus faecalis TX0309B]
gi|315582976|gb|EFU95167.1| TraB family protein [Enterococcus faecalis TX0309A]
Length = 385
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 19/272 (6%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
++ L+GT+H+S ES V I P + +E R +N+ P + D+
Sbjct: 13 SEIILIGTSHISAESADLVRKTIQEENPDTICIEWDEKRYK----KNIH-PDEWDDTDIV 67
Query: 203 KKKHN------TFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
K N FG++Y F KV+ + G EF VA +E+ K K L DR +T
Sbjct: 68 KIIKNKQFPVFIFGVIYKLFQKKVSQDMNSLVGKEFVVAVDESKKLNIKFYLIDRDSSLT 127
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
+R W + K+KL Y+F AE+ ++ + + + V +E+ +++P L
Sbjct: 128 FKRAWRMLNFREKVKLPYAF---GKIFEGAEETEEEVQNLLESENFEPVFEELKESYPNL 184
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK--QPVPVHDLMTIPSPK 374
E V ERD Y+++ + A + VAV+GK HL+G+ + K Q + L IP K
Sbjct: 185 WEVFVTERDDYLATKIQNTA--NGKTVAVLGKAHLKGVSDRLKNNQKSDLKKLEIIPPKK 242
Query: 375 PAVSALK-VLSSLGVAVAGVAIISGIYINCKK 405
L+ ++ + + + GV+ G + ++
Sbjct: 243 FGSKLLEWIVPGILLILLGVSFYQGTQVGIEQ 274
>gi|193084276|gb|ACF09935.1| TraB/PrgY-like protein [uncultured marine group II euryarchaeote
KM3-130-D10]
Length = 395
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 124/242 (51%), Gaps = 21/242 (8%)
Query: 132 LTCDSTAEGGT-------CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VS 183
++ DS ++G D+ LVGTAH+S S V I+ P +V +ELC SR S
Sbjct: 1 MSSDSVSDGNVKNVVDIDDDLRLVGTAHISSTSVALVRQQIEDWGPDLVAVELCESRKAS 60
Query: 184 MLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIF----PGSEFRVAFEEA 239
+L P+ L+ + ++++ K H IL LA + I PG+E A E A
Sbjct: 61 LLDPEALENEDLLKILND-GKSHM---ILLQSALAAEQRRMGIASGEKPGAELLAAIEAA 116
Query: 240 MKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDV 299
+ + L DR V ITLRR W KM L K +++ +FL+Q +D + + ++D
Sbjct: 117 EEAAVPIELIDRDVVITLRRAWSKMGLREKWRVMDAFLWQ----EDDDDEASVEELLEDS 172
Query: 300 DMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK 359
DML+ +++E + P L+ ERD +++ L ++ + V+AVVG GHL GI +
Sbjct: 173 DMLSNLMEEAREVAPGAGSVLIDERDAFIAGRLQQIRGK-GRVLAVVGAGHLNGIVHQLG 231
Query: 360 QP 361
+P
Sbjct: 232 EP 233
>gi|307274770|ref|ZP_07555938.1| TraB family protein [Enterococcus faecalis TX2134]
gi|306508547|gb|EFM77649.1| TraB family protein [Enterococcus faecalis TX2134]
Length = 385
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 19/272 (6%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
++ L+GT+H+S ES V I P + +E R +N+ P + D+
Sbjct: 13 SEIILIGTSHISAESADLVRKTIQEENPDTICIEWDQKRYK----KNIH-PDEWDDTDIV 67
Query: 203 KKKHN------TFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
K N FG++Y F KV+ + G EF VA +E+ K K L DR +T
Sbjct: 68 KIIKNKQFPVFIFGVIYKLFQKKVSQDMNSLVGKEFVVAVDESKKLNIKFYLIDRDSSLT 127
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
+R W + K+KL Y+F AE+ ++ + + + V +E+ +++P L
Sbjct: 128 FKRAWRMLNFREKVKLPYAF---GKIFEGAEETEEEVQNLLESENFEPVFEELKESYPNL 184
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK--QPVPVHDLMTIPSPK 374
E V ERD Y+++ + A + VAV+GK HL+G+ + K Q + L IP K
Sbjct: 185 WEVFVTERDDYLATKIQNTA--NGKTVAVLGKAHLKGVSDRLKNNQKSDLKKLEIIPPKK 242
Query: 375 PAVSALK-VLSSLGVAVAGVAIISGIYINCKK 405
L+ ++ + + + GV+ G + ++
Sbjct: 243 FGSKLLEWIVPGILLILLGVSFYQGTQVGIEQ 274
>gi|255976275|ref|ZP_05426861.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|255969147|gb|EET99769.1| conserved hypothetical protein [Enterococcus faecalis T2]
Length = 385
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 19/272 (6%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
++ L+GT+H+S ES V I P + +E R +N+ P + D+
Sbjct: 13 SEIILIGTSHISAESADLVRKTIQEENPDTICIEWDEKRYK----KNIH-PDEWDDTDIV 67
Query: 203 KKKHN------TFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
K N FG++Y F KV+ + G EF VA +E+ K K L DR +T
Sbjct: 68 KIIKNKQFPVFIFGVIYKLFQKKVSQDMNSLVGKEFVVAVDESKKLNIKFYLIDRDSSLT 127
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
+R W + K+KL Y+F AE+ ++ + + + V +E+ +++P L
Sbjct: 128 FKRAWRMLNFREKVKLPYAF---GKIFEGAEETEEEVQNLLESENFEPVFEELKESYPNL 184
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK--QPVPVHDLMTIPSPK 374
E V ERD Y+++ + A + VAV+GK HL+G+ + K Q + L IP K
Sbjct: 185 WEVFVTERDDYLATKIQNTA--NGKTVAVLGKAHLKGVSDRLKNNQKSDLKKLEIIPPKK 242
Query: 375 PAVSALK-VLSSLGVAVAGVAIISGIYINCKK 405
L+ ++ + + + GV+ G + ++
Sbjct: 243 FGSKLLEWIVPGILLILLGVSFYQGTQVGIEQ 274
>gi|422721908|ref|ZP_16778486.1| TraB family protein [Enterococcus faecalis TX2137]
gi|315028012|gb|EFT39944.1| TraB family protein [Enterococcus faecalis TX2137]
Length = 385
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 19/246 (7%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
++ L+GT+H+S ES V I P + +E R +N+ P + D+
Sbjct: 13 SEIILIGTSHISTESADLVRKTIQEENPDTICIEWDEKRYK----KNIH-PDEWDDTDIV 67
Query: 203 KKKHN------TFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
K N FG++Y F KV+ + G EF VA +E+ K K L DR +T
Sbjct: 68 KIIKNKQFPVFIFGVIYKLFQKKVSQDMNSLVGKEFVVAVDESKKLNIKFYLIDRDSSLT 127
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
+R W + K+KL Y+F AE+ ++ + + + V +E+ +++P L
Sbjct: 128 FKRAWRMLNFREKVKLPYAF---GKIFEGAEETEEEVQNLLESENFEPVFEELKESYPNL 184
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK--QPVPVHDLMTIPSPK 374
E V ERD Y+++ + A + VAV+GK HL+G+ + K Q + L IP PK
Sbjct: 185 WEVFVTERDDYLATKIQNTA--NGKTVAVLGKAHLKGVSDRLKNNQKSDLQKLEIIP-PK 241
Query: 375 PAVSAL 380
S L
Sbjct: 242 KIGSKL 247
>gi|428186009|gb|EKX54860.1| hypothetical protein GUITHDRAFT_149884 [Guillardia theta CCMP2712]
Length = 323
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 111/227 (48%), Gaps = 22/227 (9%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP--QNLKVPTVGEMVDM 201
+VYLVG+ H+SK+S V +I ++PQ V +ELC +R + Q + T+ ++ M
Sbjct: 101 EVYLVGSVHISKKSAEIVNEVILAVRPQAVMVELCEARKRAIVSIDQGQQTSTLDTILRM 160
Query: 202 WKKKHNTFGILYSWFLAKVASHLEIF-----PGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
GI A V + F G+E VA A + G KVILGDR Q T
Sbjct: 161 -------AGISRQQASAMVGDKILEFIDAYTRGNEMLVAMRAAEQVGAKVILGDRDQQTT 213
Query: 257 LRRTWEKMPLWHKIKLLYSFL---FQAFF-LPSAEDLNRMLKEMDDVDMLTLVIQEMSKA 312
LRR E+ L +KLL + + Q+ F P A+ + KE+ D ++ +
Sbjct: 214 LRRLKEEFNLSDVLKLLSTPMSPSSQSIFSTPFAKQKSE--KEITRDDARRMLQRLRDSC 271
Query: 313 FPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK 359
++ LV ERD+ M+ TL + + VVAVVG H+ GI+ +K
Sbjct: 272 SSGMISALVDERDEIMAQTLARCNFQR--VVAVVGMAHMDGIEKRYK 316
>gi|357148743|ref|XP_003574878.1| PREDICTED: traB domain-containing protein-like [Brachypodium
distachyon]
Length = 347
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 119/229 (51%), Gaps = 27/229 (11%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELC-------SSRVSMLTPQNLKVPTVG 196
+V+++GT+H++ +S +V ++ L+P V +ELC S+R + + Q P
Sbjct: 74 EVWILGTSHLAADSAADVARVLQALRPDNVVVELCRSRQDKTSNRTTHPSWQGWDHPLTN 133
Query: 197 E-----MVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDR 251
++D + +L + F +K++S G EFR A + + G +++LGDR
Sbjct: 134 RVYISFIIDAGGQSALALRLLLAVFSSKISSGANRPFGEEFRAARKVSEDIGAQLVLGDR 193
Query: 252 PVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTL----VIQ 307
P++ITL R + + K +L+ S LF+ + + +D T+ +
Sbjct: 194 PIEITLERALKSLSWDEKTRLVVS-LFRG--------ITSTTRTQEDEKAATVSPYELYN 244
Query: 308 EMSKAFPTLMETLVHERDQYMSSTLLKVATEHSS--VVAVVGKGHLQGI 354
++S ++P+L++ L+HERD +++ +L + + S VV V+GKGH+ G+
Sbjct: 245 KLSFSYPSLLQPLIHERDMFLAWSLKRSKAVNGSKRVVGVIGKGHMNGV 293
>gi|319786981|ref|YP_004146456.1| TraB family protein [Pseudoxanthomonas suwonensis 11-1]
gi|317465493|gb|ADV27225.1| TraB family protein [Pseudoxanthomonas suwonensis 11-1]
Length = 407
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 4/212 (1%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS+ S V A + + V +EL R+ LT P L + +++ K
Sbjct: 33 LLGTAHVSQASIEAVRAAVASGEYDAVAVELDPGRLQSLTDPDVLAKMDIVQVIRNGKTS 92
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S + ++A L + PG+E + A +A + G V L DR V +T RR E++
Sbjct: 93 LFAANLALSAYQRRLAEQLGVEPGAELKAAVLDARERGLPVQLIDREVGLTFRRAMERLG 152
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
W + K L F E + ++++ DML E + P L +T++ ERD
Sbjct: 153 WWGRAKTSAGILLAMF--GDEEVGDDEIEKLKQGDMLEASFGEFASHSPALYDTVIAERD 210
Query: 326 QYMSSTLLKVATEHSSVVAVVGKGHLQGIKNY 357
+YM +T L+ +V+AVVG GHL G+ +
Sbjct: 211 RYM-ATRLRQERGARNVLAVVGAGHLPGLARH 241
>gi|256962405|ref|ZP_05566576.1| TraB family protein [Enterococcus faecalis Merz96]
gi|256952901|gb|EEU69533.1| TraB family protein [Enterococcus faecalis Merz96]
Length = 385
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 19/246 (7%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
++ L+GT+H+S ES V I P + +E R +N+ P + D+
Sbjct: 13 SEIILIGTSHISAESADLVRKTIQEENPDTICIEWDQKRYK----KNIH-PDEWDDTDIV 67
Query: 203 KKKHN------TFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
K N FG++Y F KV+ + G EF VA +E+ K K L DR +T
Sbjct: 68 KIIKNKQFPVFIFGVIYKLFQKKVSQDMNSLVGKEFVVAVDESKKLNIKFYLIDRDSSLT 127
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
+R W + K+KL Y+F AE+ ++ + + + V +E+ +++P L
Sbjct: 128 FKRAWRMLNFREKVKLPYAF---GKIFEGAEETEEEVQNLLESENFEPVFEELKESYPNL 184
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK--QPVPVHDLMTIPSPK 374
E V ERD Y+++ + A + VAV+GK HL+G+ + K Q + L IP PK
Sbjct: 185 WEVFVTERDDYLATKIQNTA--NGKTVAVLGKAHLKGVSDRLKNNQKSDLQKLEIIP-PK 241
Query: 375 PAVSAL 380
S L
Sbjct: 242 KFGSKL 247
>gi|29377897|ref|NP_817023.1| pheromone shutdown protein TraB [Enterococcus faecalis V583]
gi|29345349|gb|AAO83094.1| pheromone shutdown protein TraB [Enterococcus faecalis V583]
Length = 385
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 19/246 (7%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
++ L+GT+H+S ES V I P + +E R +N+ P + D+
Sbjct: 13 SEIILIGTSHISAESADLVRKTIQEENPDTICIEWDQKRYK----KNIH-PDEWDDTDIV 67
Query: 203 KKKHN------TFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
K N FG++Y F KV+ + G EF VA +E+ K K L DR +T
Sbjct: 68 KIIKNKQFPVFIFGVIYKLFQKKVSQDMNSLVGKEFVVAVDESKKLNIKFYLIDRDSSLT 127
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
+R W + K+KL Y+F AE+ ++ + + + V +E+ +++P L
Sbjct: 128 FKRAWRMLNFREKVKLPYAF---GKIFEGAEETEEEVQNLLESENFEPVFEELKESYPNL 184
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK--QPVPVHDLMTIPSPK 374
E V ERD Y+++ + A + VAV+GK HL+G+ + K Q + L IP PK
Sbjct: 185 WEVFVTERDDYLATKIQNTA--NGKTVAVLGKAHLKGVSDRLKNNQKSDLQKLEIIP-PK 241
Query: 375 PAVSAL 380
S L
Sbjct: 242 KFGSKL 247
>gi|281203065|gb|EFA77266.1| hypothetical protein PPL_12477 [Polysphondylium pallidum PN500]
Length = 348
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 119/246 (48%), Gaps = 20/246 (8%)
Query: 130 VILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN 189
+I + ++G T +YLVG +H+S +S + V+ ++D +KP VFLEL R LT +
Sbjct: 19 IIKVLHNNSKGST--IYLVGCSHISDKSSKAVQDLLDIVKPDTVFLELSEDRKDHLTISD 76
Query: 190 LKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHL-------EIFPGSEFRVAFEEAMKY 242
+V E + + I + L+ VA+ + G E R AF+ A +
Sbjct: 77 EQVKAELERTPRIRWFSSDLSI---FLLSTVATFYHYSSKITKYTSGEEMRTAFKYAKEN 133
Query: 243 GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFL-PSAEDLNRML-----KEM 296
V+LGDR + + + +K+ S A+ + S+E R L +++
Sbjct: 134 KCTVVLGDRDQIQSWTKAVNSIDGKSLLKIYKSLCGVAYLVNKSSESEIRQLLIKYKEDL 193
Query: 297 DDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKN 356
DD+ + K +PTL + LV+ERD+YM+STL + ++V VVG+ HL GI
Sbjct: 194 DDLSKGADFDLDFFKDYPTLYKILVNERDRYMASTLRD--SPGKTIVGVVGRAHLPGIAK 251
Query: 357 YWKQPV 362
+ P+
Sbjct: 252 HINDPI 257
>gi|345864878|ref|ZP_08817073.1| TraB family protein [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345123958|gb|EGW53843.1| TraB family protein [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 398
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 16/249 (6%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMV 199
G + L+GTAHVS+ S +V ++ V +ELC SR ++L P L + +V
Sbjct: 15 GESQLTLLGTAHVSRTSAEKVRELLQSGDYDSVAVELCPSRYNALLNPDALAQMDLFRVV 74
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
+ + S + ++A I PG+E R A A + ++L DR + +T +R
Sbjct: 75 REGRVTMVMASLALSAYQQRLADQFGIEPGAEQREAVRIAQESNKPLLLIDREISVTFKR 134
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
+ + + L L A L + ++ + + D+L E ++ L
Sbjct: 135 VASNLSWFRRFSLFVGLL--AGILSKEDVAEEEIERLKEGDILETTFAEFAEDRQDLFLP 192
Query: 320 LVHERDQYMSSTLLKVATE--HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAV 377
L+ ERD+YM++ L + + H +++ V+G GHLQG+ NY + P+PA
Sbjct: 193 LIDERDRYMAARLREEIEQQGHENILVVIGAGHLQGVANYLQ-----------SEPEPAK 241
Query: 378 SALKVLSSL 386
+ +K L SL
Sbjct: 242 ATIKQLDSL 250
>gi|345879132|ref|ZP_08830809.1| TraB family pAD1 protein: plasmid mating response to sex pheromone
cAD1 [endosymbiont of Riftia pachyptila (vent Ph05)]
gi|344223859|gb|EGV50285.1| TraB family pAD1 protein: plasmid mating response to sex pheromone
cAD1 [endosymbiont of Riftia pachyptila (vent Ph05)]
Length = 409
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 16/249 (6%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMV 199
G + L+GTAHVS+ S +V ++ V +ELC SR ++L P L + +V
Sbjct: 26 GESQLTLLGTAHVSRTSAEKVRELLQSGDYDSVAVELCPSRYNALLNPDALAQMDLFRVV 85
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
+ + S + ++A I PG+E R A A + ++L DR + +T +R
Sbjct: 86 REGRVTMVMASLALSAYQQRLADQFGIEPGAEQREAVRIAQESNKPLLLIDREISVTFKR 145
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
+ + + L L A L + ++ + + D+L E ++ L
Sbjct: 146 VAGNLSWFRRFSLFVGLL--AGILSKEDVAEEEIERLKEGDILETTFAEFAEDRQDLFLP 203
Query: 320 LVHERDQYMSSTLLKVATE--HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAV 377
L+ ERD+YM++ L + + H +++ V+G GHLQG+ NY + P+PA
Sbjct: 204 LIDERDRYMAARLREEIEQQGHENILVVIGAGHLQGVANYLQS-----------EPEPAK 252
Query: 378 SALKVLSSL 386
+ +K L SL
Sbjct: 253 ATIKQLDSL 261
>gi|417397711|gb|JAA45889.1| Hypothetical protein [Desmodus rotundus]
Length = 242
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 85/164 (51%), Gaps = 15/164 (9%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LPR+V L AE G+ VY+VGTAH S +S ++V I ++P VV +ELC RVSM
Sbjct: 78 LPRTVTELV----AEDGS-RVYVVGTAHFSDDSKKDVVKTIRAVQPDVVVVELCQYRVSM 132
Query: 185 LTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVA 235
L + + + + K +++ L L KV++H L + PG EFR A
Sbjct: 133 LKMDERTLLREAKEISLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREA 192
Query: 236 FEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLF 278
F EA K K LGDRP+ +T +R + W K+KL + F
Sbjct: 193 FREASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCF 236
>gi|84489108|ref|YP_447340.1| hypothetical protein Msp_0287 [Methanosphaera stadtmanae DSM 3091]
gi|84372427|gb|ABC56697.1| conserved hypothetical membrane-spanning protein [Methanosphaera
stadtmanae DSM 3091]
Length = 431
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN--LKVPTVGEMVDMWKK 204
+V TAH+S +S V I KP++V +EL R L ++ +K ++ + K
Sbjct: 49 IVATAHISDKSVESVRKTIYEKKPEIVAIELDLGRYQGLVDESRGIKREEKFDLKSLLKS 108
Query: 205 KHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ T I+ S FL+ K+ + + PGSE A + A + + L DR +Q TL+RT
Sbjct: 109 SNLTVTIV-SAFLSHMQKKMGEEVGVKPGSEMLEASKIAREVNADIALIDRNIQTTLKRT 167
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAED--LNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
M L K+ ++ L ++F ED ++++ D + V+ +A P
Sbjct: 168 ISGMSLKEKLSFVWD-LIKSFIFSDDEDESFKEEVEQLKQEDTIKEVMDFFKEASPGGYN 226
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPV---PVHDLMTIPSPKP 375
LVHERD YM+ L + E +VVAVVG GH GI Y P P+ L I +
Sbjct: 227 ALVHERDAYMAHHLKSL--EDKNVVAVVGAGHKNGITTYLNNPDTIPPIDSLTQIKESRF 284
Query: 376 AVSA--------LKVLSSLGVAVAGVAIISGI 399
++ L ++ +G + G+ I GI
Sbjct: 285 SIIQIILYLIPILFIVVFVGAYIQGLNIGEGI 316
>gi|319652153|ref|ZP_08006272.1| hypothetical protein HMPREF1013_02885 [Bacillus sp. 2_A_57_CT2]
gi|317396142|gb|EFV76861.1| hypothetical protein HMPREF1013_02885 [Bacillus sp. 2_A_57_CT2]
Length = 388
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 6/232 (2%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP-QNLKVPTVGEMVDMWKKK 205
L+GTAHVSK S +V+ +I+ +P V +EL R +T K + +++ K
Sbjct: 18 LIGTAHVSKHSAEQVKEVIEAEQPDSVCVELDEQRYQSITEGSKWKEMDIIQVIKEKKAS 77
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S F ++A I G E E A G K++L DR +QIT R W +
Sbjct: 78 LLLMNLAISSFQNRMADQFGIKAGQEMIQGIESAKAAGAKLVLADRNIQITFARIWGNLG 137
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
L K LL + F + + L++M + D + ++ E + +FP L + L+ ERD
Sbjct: 138 LKGKSLLLSQVVASIFSKDTITE--EELEKMKNQDTINAILNEFTDSFPRLKKPLIDERD 195
Query: 326 QYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPKPAV 377
QY++ + E +VAV+G H+ GIK K+ + L P PK V
Sbjct: 196 QYLAQKIKDAPGEK--IVAVLGAAHVPGIKEEIKKEQDMAKLTERP-PKSNV 244
>gi|193084381|gb|ACF10037.1| TraB/PrgY-like protein [uncultured marine group II euryarchaeote
AD1000-18-D2]
Length = 394
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 123/242 (50%), Gaps = 22/242 (9%)
Query: 132 LTCDSTAEGGTCDVY-------LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VS 183
++ DS ++G +V LVGTAH+S S V I+ P +V +ELC SR S
Sbjct: 1 MSSDSGSDGHAKNVVDIDDNLRLVGTAHISSTSVALVRQQIEDWGPDLVAVELCESRKAS 60
Query: 184 MLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIF----PGSEFRVAFEEA 239
+L P+ L+ + ++++ K H IL LA + I PG+E A E A
Sbjct: 61 LLEPEVLENEDLLKILND-GKSHM---ILLQSALAAEQRRMGIAEGEKPGAELLAAIEAA 116
Query: 240 MKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDV 299
V L DR V ITLRR W KM L K +++ +FL+Q +D + + ++D
Sbjct: 117 EAADVPVELVDRDVVITLRRAWSKMGLREKWRVMDAFLWQ-----EDDDETSVEELLEDS 171
Query: 300 DMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK 359
DML+ +++E + P L+ ERD +++ L ++ + V+AVVG GHL G+ +
Sbjct: 172 DMLSNLMEEAREVAPGAGSVLIDERDAFIAGRLQQIRGK-GKVLAVVGAGHLNGVVHQLG 230
Query: 360 QP 361
+P
Sbjct: 231 EP 232
>gi|223996171|ref|XP_002287759.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976875|gb|EED95202.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 256
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 42/186 (22%)
Query: 211 ILYSWFLAKVASHLEIFPGSEFRVAFEEAM---------------------KYGGK---V 246
+L++ + A L + G EFR AF+ A+ G + +
Sbjct: 10 VLFAKIQSDYAKKLNVTIGGEFRSAFQSALSQQQQFWQSSGQQHTSPAFVHSRGSRPCAI 69
Query: 247 ILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEM-----DDVDM 301
ILGDRPV++TL R WE + + K+KL+ + L+ + PS ++L + + + D+
Sbjct: 70 ILGDRPVRLTLLRAWESLSAFGKLKLVLALLWSSIRQPSEKELQEWMDSILNDRTGENDL 129
Query: 302 LTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA-----------TEHSS--VVAVVGK 348
+T ++EM KAFPTL ++ ERD++M + L + H+ +VAVVG
Sbjct: 130 MTKAMEEMGKAFPTLKRVIIEERDEFMVAKLRQTTEMLMQSYDLGENNHNEMVLVAVVGA 189
Query: 349 GHLQGI 354
GH GI
Sbjct: 190 GHCSGI 195
>gi|381159412|ref|ZP_09868644.1| pheromone shutdown-related protein TraB [Thiorhodovibrio sp. 970]
gi|380877476|gb|EIC19568.1| pheromone shutdown-related protein TraB [Thiorhodovibrio sp. 970]
Length = 414
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 10/220 (4%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQV---VFLELCSSRV-SMLTPQNLKVPTVG 196
G V L+GTAHVS+ S +V ++ +P V V +ELC SR +++ P L +
Sbjct: 30 GDTRVTLLGTAHVSRASVEKVRELLR--EPGVYSAVAVELCQSRYQALMEPDALAKLDLF 87
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
++ + + S + ++A + + PG+E R A ++A + G ++L DR + +T
Sbjct: 88 AVIREKRAHMVAANLALSAYQQRLAEQIGVEPGAEQREAIDQARRLGLPILLIDREIGVT 147
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
LRR M + ++ L L A L + ++ + D+L E ++ L
Sbjct: 148 LRRAARNMGWFKRLNLFVGLL--AGLLSRDQVTEDDIEALKQGDVLETAFSEFAENRQDL 205
Query: 317 METLVHERDQYMSSTLLKVATEH--SSVVAVVGKGHLQGI 354
E L++ERD++M++ L + +H V+AV+G GH +G+
Sbjct: 206 FEPLINERDRFMAARLREEIGQHDYGQVLAVIGAGHTKGV 245
>gi|418679618|ref|ZP_13240879.1| TraB family protein [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|418684561|ref|ZP_13245745.1| TraB family protein [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418740263|ref|ZP_13296641.1| TraB family protein [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|400320060|gb|EJO67933.1| TraB family protein [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410740761|gb|EKQ85475.1| TraB family protein [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752267|gb|EKR09242.1| TraB family protein [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 359
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 12/216 (5%)
Query: 161 VEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVGEMVDMWKKKHNTFGILYSWF 216
++ II KP V +ELC+SR+ L + L + V + M+ + +
Sbjct: 1 MQRIIRKEKPDTVCVELCNSRMRSLKDSEHWKKLDIFKVFKERKMYLLLSSLILSAFQKK 60
Query: 217 LAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSF 276
L K + I PG E R+A E K G K++ DR V TL+R W + +++++ LL +
Sbjct: 61 LGKGS----IRPGDEMRMAIHEGEKIGAKIVPIDREVSTTLKRAWWNIGIFNRLFLLSAL 116
Query: 277 LFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKV 335
L F ED++ ++EM D+L + ++ K + ++ ++ ERD Y++ +
Sbjct: 117 LTSLFV---KEDISEEKIEEMKSEDVLKDLFSQLPKRYESIKNVIIDERDSYLAQKIRDS 173
Query: 336 ATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
A E V AVVG GHLQGI ++ ++ + L +P
Sbjct: 174 AKEGKKVFAVVGAGHLQGILSHVQEEKDISKLDELP 209
>gi|344337867|ref|ZP_08768800.1| TraB family protein [Thiocapsa marina 5811]
gi|343801921|gb|EGV19862.1| TraB family protein [Thiocapsa marina 5811]
Length = 401
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 5/211 (2%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNLKVPTVGEMVDMWKKK 205
L+GTAHVS+ S EV ++ + V +ELC SR S ++ P++L + ++ +
Sbjct: 20 LLGTAHVSRASEEEVRTLLQSGEYDAVAVELCRSRFSALMDPKSLSEMDLFSVIRQQRVY 79
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S + ++A I PG+E R A A + G V+L DR + +TL+R +
Sbjct: 80 MVVANLALSAYQQRLADQFGIEPGAEQRAAIRVAKELGLPVLLIDREIGVTLKRISSNLG 139
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
W + L L A L S + ++ + + D+L E + L L+ ERD
Sbjct: 140 WWKRYTLFTGLL--AAMLTSEKVSEEEIERLKEGDVLETTFAEFAHDRRDLFIPLIEERD 197
Query: 326 QYMSSTLLK--VATEHSSVVAVVGKGHLQGI 354
+YM++ L T V+AVVG GHL+GI
Sbjct: 198 RYMAARLRGETARTGVKRVLAVVGAGHLKGI 228
>gi|298705003|emb|CBJ28478.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 339
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 117/259 (45%), Gaps = 44/259 (16%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTP--QNLKVPTVGEMVD 200
+V+LVGTAH+S S VE +I +KPQVV +EL + RV S + P Q K G +
Sbjct: 78 EVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMEPPKQGEKALADGTGKE 137
Query: 201 M----WKKKHNTFGILY---------------SWFLAKVASHLE----------IFPGSE 231
+ + ++ FG + +F A + + + G E
Sbjct: 138 ISPPAERTRNPFFGAFFKQLLDPNVSVNDRITEFFAAALGKAISKMYESMDQKGLSSGQE 197
Query: 232 FRVAFEEAMKYGGKVILGDRPVQITLRRTWEKM------PLWHKIKLLYSFLFQAFFLPS 285
F +A EA G K++LGDR V+ITLRR E + + ++ +A S
Sbjct: 198 FTIAINEARACGAKLLLGDRDVRITLRRLSEALRSIDLQEISQSGQMETGLGLEALDGSS 257
Query: 286 AEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAV 345
E +N L + + + + V+ + P L ++ ERD+ M+ L+ + + + VAV
Sbjct: 258 VESINSSLDILKNRETMRKVVGFYKEEAPELYNAMIGERDKVMAVNLMGLDGKQVT-VAV 316
Query: 346 VGKGHLQGIK-----NYWK 359
VG H+ GI+ N WK
Sbjct: 317 VGLAHVDGIEGILMANGWK 335
>gi|344345004|ref|ZP_08775862.1| TraB family protein [Marichromatium purpuratum 984]
gi|343803463|gb|EGV21371.1| TraB family protein [Marichromatium purpuratum 984]
Length = 399
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 114/237 (48%), Gaps = 10/237 (4%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKKK 205
L+GTAHVS+ S +V +I V +ELC SR +++ P++L + ++ +
Sbjct: 20 LLGTAHVSRVSAEQVRRLIRSGDYDAVAVELCRSRYKAVIDPKSLSRMDLFSVIRQNRVY 79
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S + ++A I PG+E R+A A + V+L DR + TL+R +
Sbjct: 80 MVVANLALSAYQQRLADQFGIEPGAEQRMALRLARERELPVLLIDREIGTTLKRISANLG 139
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
W + L L A + S + ++ + + D+L E + L + L+ ERD
Sbjct: 140 WWRRYTLFTGLL--AAMVTSEQVTEEEVERLKEGDVLETTFAEFAADRRDLYQPLIEERD 197
Query: 326 QYMSSTLLKVA--TEHSSVVAVVGKGHLQGIKNYWKQ----PVPV-HDLMTIPSPKP 375
+YM++ L + A T V+AV+G GHL+GI + P PV +L +P P P
Sbjct: 198 RYMAAKLRREAERTGAKRVLAVIGVGHLRGIGRCLAEEDESPEPVIAELERLPPPNP 254
>gi|325922785|ref|ZP_08184515.1| pheromone shutdown-related protein TraB [Xanthomonas gardneri ATCC
19865]
gi|325546727|gb|EGD17851.1| pheromone shutdown-related protein TraB [Xanthomonas gardneri ATCC
19865]
Length = 410
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 136/296 (45%), Gaps = 26/296 (8%)
Query: 112 PVPEETKKVLPEEL---PRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFL 168
P+ E+T VL + L P +V E L+GTAHVS S V+ I
Sbjct: 4 PMTEQTTHVLDDALSGQPHRIV--------ERDGVRYTLLGTAHVSLASVAAVQRAIGSG 55
Query: 169 KPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIF 227
+ V +EL + R+ L+ P L + +++ + + + + ++A L I
Sbjct: 56 RYDAVAVELDAQRLQALSDPDALARLDLVQVIRKGRVALFAANLALAAYQRRLAKQLGIE 115
Query: 228 PGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKL---LYSFLFQAFFLP 284
PG+E + A A G V L DR V +T +R ++ + K+KL L S LF A +
Sbjct: 116 PGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLGFFGKMKLAGGLLSGLFAADEVG 175
Query: 285 SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE-HSSVV 343
E ++++ DML + + P L ET++ ERDQYM++ L + A V+
Sbjct: 176 EEE-----IEKLKQGDMLEASFGDFASESPELYETVIAERDQYMAARLREEANAGQHEVL 230
Query: 344 AVVGKGHLQGIKNYWKQ----PVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAI 395
AVVG GHL G+ + +Q P P+ + + + V + L L V + G+ I
Sbjct: 231 AVVGAGHLAGLARHLEQDTDAPGPLRESLEYVQQRKRVPWI-TLGVLAVIIVGIGI 285
>gi|420264070|ref|ZP_14766704.1| pheromone shutdown protein [Enterococcus sp. C1]
gi|394768732|gb|EJF48631.1| pheromone shutdown protein [Enterococcus sp. C1]
Length = 389
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 14/232 (6%)
Query: 146 YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKK 204
Y+VG HVS ES V ++++ +KP V +EL R + + N K ++V+++K+
Sbjct: 20 YIVGANHVSNESAALVSSVLEAVKPDSVCVELDQKRYETFVNGANWKEL---DIVEVFKQ 76
Query: 205 KHNT---FGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTW 261
K T +L F K+A ++ G E R A K+ L DR V IT ++ W
Sbjct: 77 KKATMLLMQVLLGGFQKKLALDVKDKVGGEVRSAISYVEHNQKKICLVDRDVNITFKKIW 136
Query: 262 EKMPLWHKIKLLYSFLFQAFFLPSAEDLN--RMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
M K+ L +F F++F +EDL+ +KE+ +DM+ ++ + FP + +
Sbjct: 137 RTMSFREKLYLPITF-FESF--EVSEDLSEEESIKELMKMDMVDSFFNQLKQRFPNIYKQ 193
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
++ ERD Y + + + + VVA++G H++G+ + + + V + L IP
Sbjct: 194 MITERDLYQVCKIKE--SPGTVVVAILGNAHVRGVIDNFDEDVDLDVLEKIP 243
>gi|291190238|ref|NP_001167440.1| traB domain-containing protein [Salmo salar]
gi|223673137|gb|ACN12750.1| TraB domain-containing protein [Salmo salar]
Length = 234
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 86/165 (52%), Gaps = 15/165 (9%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
ELP +V LT A G+ +YLVGTAH S S ++V I ++P VV +ELC RVS
Sbjct: 53 ELPETVTRLT----APDGSL-LYLVGTAHFSDSSKKDVATTIRAVQPDVVVVELCQYRVS 107
Query: 184 MLTPQNLKVPTVGEMVDMWK-----KKHNTFGILYSWFLAKVASH----LEIFPGSEFRV 234
ML + + +++ K K++ L L KV++H L + PG EFR
Sbjct: 108 MLKMDEKTLLKEAKDINLDKVQQAIKQNGVMSGLMQILLLKVSAHITEQLGMAPGGEFRE 167
Query: 235 AFEEAMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLF 278
AF++A + K LGDRP+ +T +R + LW K +L + F
Sbjct: 168 AFKQAGRVPFCKFHLGDRPIPVTFKRAIAALSLWQKARLAWGLCF 212
>gi|404492683|ref|YP_006716789.1| TraB family protein [Pelobacter carbinolicus DSM 2380]
gi|77544764|gb|ABA88326.1| TraB family protein [Pelobacter carbinolicus DSM 2380]
Length = 403
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML-TPQNLKVPTVGEMVDMWK 203
V L+GTAH+S++S V II+ +P V +EL R + P + ++ + +
Sbjct: 31 VVLIGTAHISRDSVDTVRRIIETEQPDAVCVELDQQRYEAIRDPHRWRSL---NLIQVLR 87
Query: 204 KKHNTF---GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ F + S F ++ + PG E A EEA + + L DR ++ TL R
Sbjct: 88 RGQGAFLLANLALSSFQKRMGMGTGVKPGEELAAAAEEAEQRDLHLSLIDRNIRTTLLRA 147
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
W + LW K++ L+S L F S+ D L E+ D L+ +++EM P L L
Sbjct: 148 WRRTGLWKKLQ-LFSALVAGMFDNSSMD-EEQLAELRQQDTLSALLEEMGDNLPELKTVL 205
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
V ERD+YM+ + + T +VAVVG H+ GI+
Sbjct: 206 VDERDRYMAYHIAQ--TPGHKIVAVVGAAHVPGIR 238
>gi|193083886|gb|ACF09565.1| TraB/PrgY-like protein [uncultured marine group II euryarchaeote
KM3-72-G3]
Length = 387
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 16/221 (7%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S V I +P +V +ELC SR ++L P L + ++++ +
Sbjct: 16 LIGTAHVSSVSVELVRQQIAEWRPDLVAVELCESRKAALLEPDGLDNEDLLKILN----E 71
Query: 206 HNTFGILYSWFLAKVASHLEIF----PGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTW 261
+ IL LA + I PG+E A E A G V L DR V ITLRR W
Sbjct: 72 GRSHMILLQSALAAEQRRMGIASGEKPGAELLAAIEAADDAGVPVELIDRDVVITLRRAW 131
Query: 262 EKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKE-MDDVDMLTLVIQEMSKAFPTLMETL 320
KM K ++L + L+Q E+ ++E ++D DML+ +++E + P L
Sbjct: 132 SKMGFREKFRVLDALLWQ-----EDEEGEASIEELLEDSDMLSNLMEEAREVAPAAGSVL 186
Query: 321 VHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP 361
+ ERD +++ + ++ V+A++G GHL+G+++ +P
Sbjct: 187 IDERDAFLAGRIQQI-RGRGKVLAIIGAGHLEGVQDQLSEP 226
>gi|66799897|ref|XP_628874.1| hypothetical protein DDB_G0293922 [Dictyostelium discoideum AX4]
gi|60462233|gb|EAL60460.1| hypothetical protein DDB_G0293922 [Dictyostelium discoideum AX4]
Length = 381
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 136/303 (44%), Gaps = 48/303 (15%)
Query: 93 LGDEVRDESSDRDETNGAVPVPE--ETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGT 150
+ DE D +++ + + E E K + E + S I+ + T VYL+GT
Sbjct: 1 MNDEYYDSLNNKIQKKNEINFKENIEILKRIKENIKDSEKIINVVINEKTNTV-VYLIGT 59
Query: 151 AHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP-------QNLKVPTVG----EMV 199
HVS++SC +++ ++ ++P +F+EL + R +LT Q LK P + ++
Sbjct: 60 IHVSQQSCEDIKTLLSIVEPDTIFIELSNERAPLLTSTEDQIISQLLKKPNINWFTTKLS 119
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFP-----------------GSEFRVAFEEAMKY 242
D + H F ++ K++ + + G+EFR+ ++ +
Sbjct: 120 DFYLSIHQNF----YYYTTKISMNNKFLKNQIGNNVNNENNKPYIYGNEFRIGYQYSKLN 175
Query: 243 GGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSF-------LFQAFFLPSAEDLNRMLKE 295
V+LGDR + +W ++ + +K + F+ + P E K
Sbjct: 176 KCSVLLGDR----NFKSSWNRIFNYLDLKTILELGGYGVKTFFKIYNQPIDEIREEYYKS 231
Query: 296 MDDVDMLTLVIQEMSKAFPTLMET-LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGI 354
++++ + + P ++ L+ ERDQ+M+S + + A +VA+VGKGH++GI
Sbjct: 232 VNELIDASWKSDIWRRDLPMAVQRGLIDERDQFMASCI-RDAPHSKRMVAIVGKGHIKGI 290
Query: 355 KNY 357
N+
Sbjct: 291 SNH 293
>gi|92114992|ref|YP_574920.1| TraB family protein [Chromohalobacter salexigens DSM 3043]
gi|91798082|gb|ABE60221.1| TraB family protein [Chromohalobacter salexigens DSM 3043]
Length = 404
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 9/222 (4%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMV 199
G L+GTAHVS+ S EV +I + V +ELC +R T P + + +++
Sbjct: 15 GETRYTLLGTAHVSRASADEVRELIRSGEFDAVAIELCPTRYQSATQPDAMAKMDLFQVL 74
Query: 200 DMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K + F +VA + PG+E ++A +EA + + L DR + +TL+R
Sbjct: 75 RQGKAGMVAASLALGAFQQRVAEQSGVTPGAEMQMAIKEARRADLPLYLVDRDIGVTLKR 134
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLP--SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLM 317
+ +P W ++ L+ L S+E++ R LKE D+L E ++ +L
Sbjct: 135 IYHSVPWWQRMSLVSGLLGSVVSRKKVSSEEIER-LKEG---DVLESTFAEFAEQSESLY 190
Query: 318 ETLVHERDQYMSSTLLKVATEHS--SVVAVVGKGHLQGIKNY 357
L+ ERD+YM+ L + + ++ VVG GHL+G+ +
Sbjct: 191 TPLIRERDRYMALRLREEVKGETPRHILVVVGAGHLKGLGEH 232
>gi|412988923|emb|CCO15514.1| predicted protein [Bathycoccus prasinos]
Length = 309
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 37/245 (15%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPT--------- 194
+++LVGT+HVSK S RE E +I +KP V+ +ELC R L Q +
Sbjct: 50 EIFLVGTSHVSKASARETEELIRLVKPDVIAVELCEERFEQLKEQMKEDKEEKTKKTKKK 109
Query: 195 ---VGEMVDMWKKKHNTFGI----------LYSWFLAKVASHLEIFPGSEFRVAFEEAMK 241
+G+ + + K + + L +++ + +S +E PG EFRVA EA +
Sbjct: 110 RSFLGDFLAIVKNVSSNRDLGALDRCLAIGLKAFYASLKSSGME--PGEEFRVAIREAER 167
Query: 242 YGGKVILGDRPVQITLRRTWEKMPL-----W--HKIKLLYSFLFQAFFLPSAEDLNRM-- 292
+++L DR V TL+ E + + W + K L Q F +A N
Sbjct: 168 LNARLVLADRDVNKTLKALRESVSVADVFGWFVYGEKKGGPTLPQEFEKMAAAGFNSTEM 227
Query: 293 ---LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKG 349
++ M + + + + + M FP +M +VH+RD M+ +K + +V VVG
Sbjct: 228 QDNMEAMKNRNAVGQMKKYMQFQFPNIMSAMVHQRDDEMADA-IKREKDAEKIVMVVGLA 286
Query: 350 HLQGI 354
H+ GI
Sbjct: 287 HVDGI 291
>gi|224120134|ref|XP_002318253.1| predicted protein [Populus trichocarpa]
gi|222858926|gb|EEE96473.1| predicted protein [Populus trichocarpa]
Length = 247
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 83/142 (58%), Gaps = 6/142 (4%)
Query: 216 FLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYS 275
F +K++S + G EFR A + A + G +++LGDRP++ITL R W + K+ L+ +
Sbjct: 50 FSSKISSDVNRPFGDEFRAARKVAEEIGAQIVLGDRPIEITLERAWNSLKWREKLSLVIA 109
Query: 276 FLFQAFFLPSAEDLNRMLKEMDDVDMLTL-VIQEMSKAFPTLMETLVHERDQYMSSTLL- 333
+ + S+ D+++ + D T + +++S ++P+L++ L+HERD Y++ +L
Sbjct: 110 VVRG---ITSSSDISKNNFKASSTDDRTFQLYEQLSFSYPSLLQPLIHERDTYLAWSLKR 166
Query: 334 -KVATEHSSVVAVVGKGHLQGI 354
K VV V+GKGH+ G+
Sbjct: 167 SKAVNNGKRVVGVIGKGHMNGV 188
>gi|421132181|ref|ZP_15592352.1| TraB family protein [Leptospira kirschneri str. 2008720114]
gi|410356329|gb|EKP03669.1| TraB family protein [Leptospira kirschneri str. 2008720114]
Length = 359
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 12/216 (5%)
Query: 161 VEAIIDFLKPQVVFLELCSSRVSMLTP----QNLKVPTVGEMVDMWKKKHNTFGILYSWF 216
++ II KP V +ELC+SR+ L + L + V + M+ + +
Sbjct: 1 MQRIIRKEKPDTVCVELCNSRMRSLKDSEHWKKLDIFKVFKERKMYLLLSSLILSAFQKK 60
Query: 217 LAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSF 276
L K + I PG E R+A E K G K++ DR V TL+R W + +++++ LL +
Sbjct: 61 LGKGS----IRPGDEMRMAIHEGEKIGAKIVPIDREVSTTLKRAWWNIGIFNRLFLLSAL 116
Query: 277 LFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKV 335
L F ED++ ++EM D+L + ++ K + ++ ++ ERD Y++ +
Sbjct: 117 LTSLFV---KEDISEEKIEEMKSEDVLKDLFSQLPKRYESIKNVIIDERDSYLAQKIRDS 173
Query: 336 ATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
A E + VVG GHLQGI ++ ++ + L +P
Sbjct: 174 AKEGKKIFVVVGAGHLQGILSHVQEEKDISKLDELP 209
>gi|21231640|ref|NP_637557.1| pheromone shutdown protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768238|ref|YP_243000.1| pheromone shutdown protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|21113334|gb|AAM41481.1| pheromone shutdown protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66573570|gb|AAY48980.1| pheromone shutdown protein [Xanthomonas campestris pv. campestris
str. 8004]
Length = 410
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 9/255 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S V+ I + V +EL + R+ L+ P L + +++ +
Sbjct: 34 LLGTAHVSLASVAAVQRAIGSGRYDAVAVELDAQRLQALSDPDALARLDLVQVIRKGRVA 93
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A G V L DR V +T +R ++
Sbjct: 94 LFAANLALAAYQRRLAKQLGIEPGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLG 153
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL L A + E ++++ DML + + P L ET++ ERD
Sbjct: 154 FFGKMKLAGGLL--AGLFAADEVGEEEIEKLKQGDMLEASFGDFASESPELYETVIAERD 211
Query: 326 QYMSSTLLKVAT-EHSSVVAVVGKGHLQGIKNYWKQ----PVPVHDLMTIPSPKPAVSAL 380
+YM++ L + A+ V+AVVG GHL G+ + Q P P+ + + + + +
Sbjct: 212 RYMATRLREEASPTQREVLAVVGAGHLAGLARHLAQDTDAPGPLRESLEYVQQRKRIPWI 271
Query: 381 KVLSSLGVAVAGVAI 395
L L V VAG+ I
Sbjct: 272 -TLGMLTVIVAGIGI 285
>gi|188991374|ref|YP_001903384.1| TraB family membrane protein [Xanthomonas campestris pv. campestris
str. B100]
gi|167733134|emb|CAP51332.1| Putative TraB family membrane protein [Xanthomonas campestris pv.
campestris]
Length = 410
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 9/255 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S V+ I + V +EL + R+ L+ P L + +++ +
Sbjct: 34 LLGTAHVSLASVAAVQRAIGSGRYDAVAVELDAQRLQALSDPDALARLDLVQVIRKGRVA 93
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A G V L DR V +T +R ++
Sbjct: 94 LFAANLALAAYQRRLAKQLGIEPGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLG 153
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL L A + E ++++ DML + + P L ET++ ERD
Sbjct: 154 FFGKMKLAGGLL--AGLFAADEVGEEEIEKLKQGDMLEASFGDFASESPELYETVIAERD 211
Query: 326 QYMSSTLLKVAT-EHSSVVAVVGKGHLQGIKNYWKQ----PVPVHDLMTIPSPKPAVSAL 380
+YM++ L + A+ V+AVVG GHL G+ + Q P P+ + + + + +
Sbjct: 212 RYMATRLREEASPTQREVLAVVGAGHLAGLARHLTQDTDAPGPLRESLEYVQQRKRIPWI 271
Query: 381 KVLSSLGVAVAGVAI 395
L L V VAG+ I
Sbjct: 272 -TLGMLTVIVAGIGI 285
>gi|94264068|ref|ZP_01287867.1| TraB determinant [delta proteobacterium MLMS-1]
gi|93455484|gb|EAT05674.1| TraB determinant [delta proteobacterium MLMS-1]
Length = 208
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 19/193 (9%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK- 203
+ L+GTAH+S++S V +I+ +P V +EL R L + E++D+ +
Sbjct: 26 LLLLGTAHISRQSVDLVRRVINQQRPDGVCIELDQKRYESLAHRK-----RWELLDLKEI 80
Query: 204 -KKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
++ +L + LA K+ L + PGSE A A + G V L DR V++T+R
Sbjct: 81 LRRRQLATLLINLVLASYQKKLGDKLGVRPGSELLAAATSAQELGIPVALCDRDVRVTMR 140
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFF---LPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPT 315
R W P WH+ +L L F S ED L+++ D D+L+ ++ + + P
Sbjct: 141 RAWRATP-WHRRFMLLGALLAGIFDRGKVSEED----LRQLRDSDLLSEMLAALGRDLPE 195
Query: 316 LMETLVHERDQYM 328
L L+ ERD Y+
Sbjct: 196 LKRVLIDERDTYL 208
>gi|422705007|ref|ZP_16762814.1| TraB family protein [Enterococcus faecalis TX1302]
gi|315163495|gb|EFU07512.1| TraB family protein [Enterococcus faecalis TX1302]
Length = 393
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 30/223 (13%)
Query: 146 YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKK 205
YLVGT+H+S+ S + V+ +I+ ++P V +EL R T N W
Sbjct: 26 YLVGTSHISENSVKLVKEVIERVQPDTVSIELDKKRYEKYTNSN-----------QWGNT 74
Query: 206 HNTF------------GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
I+YS + K+A+ E A + A + G + L DR +
Sbjct: 75 DIIKIIKEKKLVVLISNIVYSAYQKKLANTKGTTQAGELIQAIKSAKEIGANIQLIDRDI 134
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAF 313
Q+T +R W + K K LF FF + L+E + D V +SK +
Sbjct: 135 QVTFKRMWRHLSFLEKPK-----LFMTFFTEFDDIEQDKLEEYLESDSFDKVFISLSKKY 189
Query: 314 PTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKN 356
P+L + ++ +RD+YMS+ L V VVGK H++GIK+
Sbjct: 190 PSLYQDMITDRDKYMSTKL--KNNSSQVNVVVVGKAHMKGIKD 230
>gi|257423095|ref|ZP_05600085.1| traB protein, partial [Enterococcus faecalis X98]
gi|257164919|gb|EEU94879.1| traB protein [Enterococcus faecalis X98]
Length = 392
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 146 YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKK 205
YLVGT+H+S+ S + V+ +I+ ++P V +EL R T N W
Sbjct: 26 YLVGTSHISENSVKLVKEVIERVQPDTVSIELDKKRYEKYTNSN-----------QWGNT 74
Query: 206 HNTF------------GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
I+YS + K+A+ E A + A + G + L DR +
Sbjct: 75 DIIKIIKEKKLVVLISNIVYSAYQKKLANTKGTTQAGELIQAIKSAKEIGANIQLIDRDI 134
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAF 313
Q+T +R W + K K LF FF + L+E + D V +SK +
Sbjct: 135 QVTFKRMWRHLSFLEKPK-----LFMTFFTEFDDIEQDKLEEYLESDSFDKVFISLSKKY 189
Query: 314 PTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
P+L + ++ +RD+YMS+ L V VVGK H++GIK
Sbjct: 190 PSLYQDMITDRDKYMSTKL--KNNSSQVNVVVVGKAHMKGIK 229
>gi|384428103|ref|YP_005637462.1| pheromone shutdown protein [Xanthomonas campestris pv. raphani
756C]
gi|341937205|gb|AEL07344.1| pheromone shutdown protein [Xanthomonas campestris pv. raphani
756C]
Length = 406
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 9/255 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S V+ I + V +EL + R+ L+ P L + +++ +
Sbjct: 30 LLGTAHVSLASVAAVQRAIGSGRYDAVAVELDAQRLQALSDPDALARLDLVQVIRKGRVA 89
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A G V L DR V +T +R ++
Sbjct: 90 LFAANLALAAYQRRLAKQLGIEPGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLG 149
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL L A + E ++++ DML + + P L ET++ ERD
Sbjct: 150 FFGKMKLAGGLL--AGLFAADEVGEEEIEKLKQGDMLEASFGDFASESPELYETVIAERD 207
Query: 326 QYMSSTLLKVAT-EHSSVVAVVGKGHLQGIKNYWKQ----PVPVHDLMTIPSPKPAVSAL 380
+YM++ L + A+ V+AVVG GHL G+ + Q P P+ + + + + +
Sbjct: 208 RYMATRLREEASPTQLEVLAVVGAGHLAGLARHLAQDTDAPGPLRESLEYVQQRKRIPWI 267
Query: 381 KVLSSLGVAVAGVAI 395
L L V VAG+ I
Sbjct: 268 -TLGMLTVIVAGIGI 281
>gi|29377805|ref|NP_816933.1| pheromone shutdown protein TraB [Enterococcus faecalis V583]
gi|256959450|ref|ZP_05563621.1| PrgY [Enterococcus faecalis DS5]
gi|29345257|gb|AAO83004.1| pheromone shutdown protein TraB [Enterococcus faecalis V583]
gi|256949946|gb|EEU66578.1| PrgY [Enterococcus faecalis DS5]
Length = 388
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 146 YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKK 205
YLVGT+H+S+ S + V+ +I+ ++P V +EL R T N W
Sbjct: 21 YLVGTSHISENSVKLVKEVIERVQPDTVSIELDKKRYEKYTNSN-----------QWGNT 69
Query: 206 HNTF------------GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
I+YS + K+A+ E A + A + G + L DR +
Sbjct: 70 DIIKIIKEKKLVVLISNIVYSAYQKKLANTKGTTQAGELIQAIKSAKEIGANIQLIDRDI 129
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAF 313
Q+T +R W + K K LF FF + L+E + D V +SK +
Sbjct: 130 QVTFKRMWRHLSFLEKPK-----LFMTFFTEFDDIEQDKLEEYLESDSFDKVFISLSKKY 184
Query: 314 PTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
P+L + ++ +RD+YMS+ L V VVGK H++GIK
Sbjct: 185 PSLYQDMITDRDKYMSTKL--KNNSSQVNVVVVGKAHMKGIK 224
>gi|257080277|ref|ZP_05574638.1| TraB family protein [Enterococcus faecalis JH1]
gi|256988307|gb|EEU75609.1| TraB family protein [Enterococcus faecalis JH1]
Length = 393
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 146 YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKK 205
YLVGT+H+S+ S + V+ +I+ ++P V +EL R T N W
Sbjct: 26 YLVGTSHISENSVKLVKEVIERVQPDTVSIELDKKRYEKYTNSN-----------QWGNT 74
Query: 206 HNTF------------GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
I+YS + K+A+ E A + A + G + L DR +
Sbjct: 75 DIIKIIKEKKLVVLISNIVYSAYQKKLANTKGTTQAGELIQAIKSAKEIGANIQLIDRDI 134
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAF 313
Q+T +R W + K K LF FF + L+E + D V +SK +
Sbjct: 135 QVTFKRMWRHLSFLEKPK-----LFMTFFTEFDDIEQDKLEEYLESDSFDKVFISLSKKY 189
Query: 314 PTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
P+L + ++ +RD+YMS+ L V VVGK H++GIK
Sbjct: 190 PSLYQDMITDRDKYMSTKL--KNNSSQVNVVVVGKAHMKGIK 229
>gi|227556039|ref|ZP_03986086.1| pheromone shutdown protein TraB [Enterococcus faecalis HH22]
gi|227174838|gb|EEI55810.1| pheromone shutdown protein TraB [Enterococcus faecalis HH22]
Length = 393
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 146 YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKK 205
YLVGT+H+S+ S + V+ +I+ ++P V +EL R T N W
Sbjct: 26 YLVGTSHISENSVKLVKEVIERVQPDTVSIELDKKRYEKYTNSN-----------QWGNT 74
Query: 206 HNTF------------GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
I+YS + K+A+ E A + A + G + L DR +
Sbjct: 75 DIIKIIKEKKLVVLISNIVYSAYQKKLANTKGTTQAGELIQAIKSAKEIGANIQLIDRDI 134
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAF 313
Q+T +R W + K K LF FF + L+E + D V +SK +
Sbjct: 135 QVTFKRMWRHLSFLEKPK-----LFMTFFTEFDDIEQDKLEEYLESDSFDKVFISLSKKY 189
Query: 314 PTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
P+L + ++ +RD+YMS+ L V VVGK H++GIK
Sbjct: 190 PSLYQDMITDRDKYMSTKL--KNNSSQVNVVVVGKAHMKGIK 229
>gi|229547831|ref|ZP_04436556.1| pheromone shutdown protein TraB [Enterococcus faecalis ATCC 29200]
gi|307273748|ref|ZP_07554973.1| TraB family protein [Enterococcus faecalis TX0855]
gi|307274786|ref|ZP_07555952.1| TraB family protein [Enterococcus faecalis TX2134]
gi|229306995|gb|EEN72991.1| pheromone shutdown protein TraB [Enterococcus faecalis ATCC 29200]
gi|306508487|gb|EFM77591.1| TraB family protein [Enterococcus faecalis TX2134]
gi|306509549|gb|EFM78594.1| TraB family protein [Enterococcus faecalis TX0855]
Length = 393
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 146 YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKK 205
YLVGT+H+S+ S + V+ +I+ ++P V +EL R T N W
Sbjct: 26 YLVGTSHISENSVKLVKEVIERVQPDTVSIELDKKRYEKYTNSN-----------QWGNT 74
Query: 206 HNTF------------GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
I+YS + K+A+ E A + A + G + L DR +
Sbjct: 75 DIIKIIKEKKLVVLISNIVYSAYQKKLANTKGTTQAGELIQAIKSAKEIGANIQLIDRDI 134
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAF 313
Q+T +R W + K K LF FF + L+E + D V +SK +
Sbjct: 135 QVTFKRMWRHLSFLEKPK-----LFMTFFTEFDDIEQDKLEEYLESDSFDKVFISLSKKY 189
Query: 314 PTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
P+L + ++ +RD+YMS+ L V VVGK H++GIK
Sbjct: 190 PSLYQDMITDRDKYMSTKL--KNNSSQVNVVVVGKAHMKGIK 229
>gi|475428|gb|AAA67128.1| TraB [Enterococcus faecalis]
Length = 388
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 146 YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKK 205
YLVGT+H+S+ S + V+ +I+ ++P V +EL R T N W
Sbjct: 21 YLVGTSHISENSVKLVKEVIERVQPDTVSIELDKKRYEKYTNSN-----------QWGNT 69
Query: 206 HNTF------------GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
I+YS + K+A+ E A + A + G + L DR +
Sbjct: 70 DIIKIIKEKKLVVLISNIVYSAYQKKLANTKGTTQAGELIQAIKSAKEIGANIQLIDRDI 129
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAF 313
Q+T +R W + K K LF FF + L+E + D V +SK +
Sbjct: 130 QVTFKRMWRHLSFLEKPK-----LFMTFFTEFDDIEQDKLEEYLESDSFDKVFISLSKKY 184
Query: 314 PTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
P+L + ++ +RD+YMS+ L V VVGK H++GIK
Sbjct: 185 PSLYQDMITDRDKYMSTKL--KNNSSQVNVVVVGKAHMKGIK 224
>gi|422688091|ref|ZP_16746252.1| TraB family protein [Enterococcus faecalis TX0630]
gi|315578859|gb|EFU91050.1| TraB family protein [Enterococcus faecalis TX0630]
Length = 393
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 146 YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKK 205
YLVGT+H+S+ S + V+ +I+ ++P V +EL R T N W
Sbjct: 26 YLVGTSHISENSVKLVKEVIERVQPDTVSIELDKKRYEKYTNSN-----------QWGNT 74
Query: 206 HNTF------------GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
I+YS + K+A+ E A + A + G + L DR +
Sbjct: 75 DIIKIIKEKKLVVLISNIVYSAYQKKLANTKGTTQAGELIQAIKSAKEIGANIQLIDRDI 134
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAF 313
Q+T +R W + K K LF FF + L+E + D V +SK +
Sbjct: 135 QVTFKRMWRHLSFLEKPK-----LFMTFFTEFDDIEQDKLEEYLESDSFDKVFISLSKKY 189
Query: 314 PTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
P+L + ++ +RD+YMS+ L V VVGK H++GIK
Sbjct: 190 PSLYQDMITDRDKYMSTKL--KNNSSQVNVVVVGKAHMKGIK 229
>gi|313247785|ref|YP_004032947.1| pheromone shutdown protein [Enterococcus faecalis]
gi|312836952|dbj|BAJ34838.1| pheromone shutdown protein [Enterococcus faecalis]
Length = 388
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 146 YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKK 205
YLVGT+H+S+ S + V+ +I+ ++P V +EL R T N W
Sbjct: 21 YLVGTSHISENSVKLVKEVIERVQPDTVSIELDKKRYEKYTNSN-----------QWGNT 69
Query: 206 HNTF------------GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
I+YS + K+A+ E A + A + G + L DR +
Sbjct: 70 DIIKIIKEKKLVVLISNIVYSAYQKKLANTKGTTQAGELIQAIKSAKEIGANIQLIDRDI 129
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAF 313
Q+T +R W + K K LF FF + L+E + D V +SK +
Sbjct: 130 QVTFKRMWRHLSFLEKPK-----LFMTFFTEFDDIEQDKLEEYLESDSFDKVFISLSKKY 184
Query: 314 PTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
P+L + ++ +RD+YMS+ L V VVGK H++GIK
Sbjct: 185 PSLYQDMITDRDKYMSTKL--KNNSSQVNVVVVGKAHMKGIK 224
>gi|76801993|ref|YP_327001.1| hypothetical protein NP2702A [Natronomonas pharaonis DSM 2160]
gi|76557858|emb|CAI49442.1| TraB family protein [Natronomonas pharaonis DSM 2160]
Length = 501
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 8/136 (5%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V +VGTAHVS+ S EVEA+ID +P VV +EL R L + + G+++ K
Sbjct: 10 VTVVGTAHVSEASVEEVEAVIDEERPDVVAVELDEGRYRQLRGEAPEDLDAGDLL----K 65
Query: 205 KHNTFGILYSWFL----AKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ + L W L A++ +I PG++ + A + A YG V L DR +Q+T++R
Sbjct: 66 GNTVYQFLAYWMLSYVQARLGDRFDIEPGADMKAAVDTAEAYGIDVALVDRDIQVTIQRF 125
Query: 261 WEKMPLWHKIKLLYSF 276
W ++ + K+KL+ S
Sbjct: 126 WARLSFFEKLKLVGSL 141
>gi|297604707|ref|NP_001055957.2| Os05g0499500 [Oryza sativa Japonica Group]
gi|255676469|dbj|BAF17871.2| Os05g0499500 [Oryza sativa Japonica Group]
Length = 185
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 57/110 (51%), Gaps = 43/110 (39%)
Query: 119 KVLPEELPRSVVILTCDSTAE------GGTCDVYLVGTAHVSKESCREVEAIIDFLKPQV 172
K LPEEL + VV L C+++ E GGTC VY+VGTAHVS+
Sbjct: 101 KELPEELAKGVVCLECETSPEAEAAGAGGTCRVYVVGTAHVSQ----------------- 143
Query: 173 VFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKH-NTFGILYSWFLAKVA 221
VPT+ EM+DMWKKK NTFGILYSWFLAKV
Sbjct: 144 -------------------VPTMNEMIDMWKKKKMNTFGILYSWFLAKVC 174
>gi|390950379|ref|YP_006414138.1| pheromone shutdown-related protein TraB [Thiocystis violascens DSM
198]
gi|390426948|gb|AFL74013.1| pheromone shutdown-related protein TraB [Thiocystis violascens DSM
198]
Length = 400
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 121/247 (48%), Gaps = 12/247 (4%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKKK 205
L+GTAHVS+ S +VE ++ V +ELC SR +++ P++L + ++ +
Sbjct: 20 LLGTAHVSRASAEQVERMLQTGDYDAVAVELCRSRFNALMDPRSLAQMDLFSVIRQNRVY 79
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S + ++A I PG+E R+A A + ++L DR + +TL+R +
Sbjct: 80 MVVASLALSAYQQRLADQFGIEPGAEQRMAIRLAKERALPILLIDREIGMTLKRISANLG 139
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
W + L L L S E ++ + + D+L E + L L+ ERD
Sbjct: 140 WWKRSSLFAGLL--GAMLNSNEVTEEEVERLKEGDVLETTFAEFATDRKDLFVPLIEERD 197
Query: 326 QYMSSTL-LKVA-TEHSSVVAVVGKGHLQGIKNYWKQ----PVPV-HDLMTIPSPK--PA 376
+YM++ L L VA + V+ VVG GHL+GI + +Q P P+ +L IP P P
Sbjct: 198 RYMAAKLRLDVAQLDVRRVLVVVGAGHLKGIADALEQDRAEPGPILAELERIPPPSRWPK 257
Query: 377 VSALKVL 383
V+A VL
Sbjct: 258 VAAWAVL 264
>gi|345869465|ref|ZP_08821423.1| TraB family protein [Thiorhodococcus drewsii AZ1]
gi|343923388|gb|EGV34080.1| TraB family protein [Thiorhodococcus drewsii AZ1]
Length = 400
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 7/214 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKKK 205
L+GTAHVS+ S +V+ ++ + +ELC SR +++ P++L + ++ +
Sbjct: 20 LLGTAHVSRVSADQVKKLVQTENFDAIAVELCRSRFNALMDPKSLSQMDLFSVIRQNRVY 79
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S + ++A I PGSE R A A + V+L DR + ITL+R +
Sbjct: 80 MVVANLALSAYQQRLADQFGIEPGSEQRTALRLAKERDLPVMLIDREIGITLKRISASLG 139
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNR-MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHER 324
W + L + + +AE++ ++ + + D+L E + L L+ ER
Sbjct: 140 WWKRYGLFAGLVSS---MVTAEEVTEDEVERLKEGDVLETTFAEFASDRRDLYVPLIEER 196
Query: 325 DQYMSSTLLKVATEHSS--VVAVVGKGHLQGIKN 356
DQYM++ L + A + V+AVVG GHL+GI +
Sbjct: 197 DQYMAAKLRREAARIGAHRVLAVVGVGHLKGIAD 230
>gi|408357539|ref|YP_006846070.1| TraB family protein [Amphibacillus xylanus NBRC 15112]
gi|407728310|dbj|BAM48308.1| TraB family protein [Amphibacillus xylanus NBRC 15112]
Length = 391
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 7/230 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKKK 205
++GTAHVSK S V+ +I+ +P V +EL R S+ K + +++ K
Sbjct: 20 IIGTAHVSKSSAELVKQVIEQEQPDSVCIELDQQRYESIRDGSKWKEMDIFKVIKEKKAT 79
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ S F ++A I G E + A + G ++L DR +QIT R W +
Sbjct: 80 LLIMNLAISSFQKRMAKQFGIEAGQEMIQGIQSAEEIGATLVLADRNIQITFSRIWSGVD 139
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHER 324
L K+ LL + F S E + L+++ + D + ++ E ++ FP L + LV ER
Sbjct: 140 LKGKLMLLTQIIASIF---SNETITEEELEKLKEKDSINAILDEFTEHFPQLKKPLVDER 196
Query: 325 DQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIPSPK 374
DQY++ + + + VVAV+G H+ G+ + L T+P K
Sbjct: 197 DQYLAEKIKRAPG--NKVVAVLGAAHVPGVTREIDNEHDLKALTTVPKKK 244
>gi|449020020|dbj|BAM83422.1| similar to pheromone shutdown protein TraB [Cyanidioschyzon merolae
strain 10D]
Length = 358
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 42/272 (15%)
Query: 140 GGTCDV-YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQ-NLKVPT--- 194
G T V +++GTAH+S S + +I ++P V +EL RV + + + K P+
Sbjct: 96 GSTGAVAHVLGTAHISALSVSQTRELIRRVQPDTVVVELDDERVQTVRERLDKKDPSQDS 155
Query: 195 --VGEMVDMWKK-KHNTFGI----LYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVI 247
E++ ++ + + G +Y + + PG+EF A EEA + G +V+
Sbjct: 156 SLFSELLRVFTDPRGGSLGSRMFEVYFKLMYRALRMAGFLPGAEFVAAIEEAERIGARVV 215
Query: 248 LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDD--------- 298
LGDR + T+ R + ++H +S + A P +L +L + D
Sbjct: 216 LGDRNIHETMERL--RAAVFHN----FSDVLHALVSPPPPELESLLDNLKDQARGGNARK 269
Query: 299 -----VDML------TLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE-HSSVVAVV 346
VD L L+ + +S++ P + + ++ ERD ++S K+AT +VA+V
Sbjct: 270 ISTDFVDALLDRKSVRLLTRFLSRSLPAVSKVMLDERDVILAS---KIATAPGQKIVAIV 326
Query: 347 GKGHLQGIKNYWKQPVPVHDLMTIPSPKPAVS 378
G HL GI+ +W Q + ++ SP P+ S
Sbjct: 327 GAAHLDGIERWWLQNIEPDPIIVSSSPLPSQS 358
>gi|381173200|ref|ZP_09882305.1| TraB family protein [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|380686361|emb|CCG38792.1| TraB family protein [Xanthomonas citri pv. mangiferaeindicae LMG
941]
Length = 406
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 121/255 (47%), Gaps = 9/255 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S V+ I + V +EL + R+ L+ P L + +++ +
Sbjct: 30 LLGTAHVSLASVAAVQRAIGSGRYDAVAVELDAQRLQALSDPDALARLDLVQVIRKGRVA 89
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A G V L DR V +T +R ++
Sbjct: 90 LFAANLALAAYQRRLAKQLGIEPGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLG 149
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL L F + E ++++ DML + + P L ET++ ERD
Sbjct: 150 FFGKMKLAGGLLGGLF--ATDEVGEEEIEKLKQGDMLEASFGDFASESPELYETVIAERD 207
Query: 326 QYMSSTLL-KVATEHSSVVAVVGKGHLQGIKNYWKQ----PVPVHDLMTIPSPKPAVSAL 380
QYM++ L +V + ++AVVG GHL G+ + +Q P P+ + + + + +
Sbjct: 208 QYMATRLREEVGADQREILAVVGAGHLAGLARHLEQDTAAPGPLRESLEYVQQRKRIPWI 267
Query: 381 KVLSSLGVAVAGVAI 395
L L V + G+ I
Sbjct: 268 -TLGILAVIITGIGI 281
>gi|398330845|ref|ZP_10515550.1| pheromone shutdown protein [Leptospira alexanderi serovar Manhao 3
str. L 60]
Length = 338
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 4/147 (2%)
Query: 226 IFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPS 285
I PG E R+A E K G +++ DR + TL+R W + +++++ LL + L F
Sbjct: 45 IRPGDEMRMAIVEGEKIGARIVPIDREISTTLKRAWWNIGIFNRMFLLSALLTSLFV--- 101
Query: 286 AEDLNR-MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVA 344
ED++ ++EM D+L + ++ K + ++ ++ ERD Y++ + A E + A
Sbjct: 102 KEDVSEEKIEEMKSEDVLKDLFSQLPKRYESIKNVIIDERDSYLAQKIRDAAKEGKKIFA 161
Query: 345 VVGKGHLQGIKNYWKQPVPVHDLMTIP 371
VVG GHLQGI N+ ++ + L +P
Sbjct: 162 VVGAGHLQGIMNHVQEERDISSLDHLP 188
>gi|308804197|ref|XP_003079411.1| Maltase glucoamylase and related hydrolases, glycosyl hydrolase
family 31 (ISS) [Ostreococcus tauri]
gi|116057866|emb|CAL54069.1| Maltase glucoamylase and related hydrolases, glycosyl hydrolase
family 31 (ISS) [Ostreococcus tauri]
Length = 1046
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 113/249 (45%), Gaps = 32/249 (12%)
Query: 142 TCD--VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP------QNLKVP 193
TC+ +YLVGTAHVS++S +EV ++ ++P VV +ELC R++ + + K
Sbjct: 790 TCEREIYLVGTAHVSEKSAQEVAELVRRVRPTVVAVELCDERLATMRETIAKERRGEKKG 849
Query: 194 TVGEMVDMWKKKHNTFG----------ILYSWFLAKVASHLEIF------PGSEFRVAFE 237
G + + + FG + A + + F PG EF+ A +
Sbjct: 850 EGGTSEFVRRAVRDFFGAFTGARGPGNVADGLLGAAMKTFYGFFRLSGLEPGKEFKEAVK 909
Query: 238 EAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFL------FQAFFLPSAEDLNR 291
EA G +V+ DR V+ TLRR E + + ++ + +D+
Sbjct: 910 EAEALGAQVVCADRDVRETLRRLRENLSFDDVMAIVSGRVRPGGPSPPPGIEGGMDDIEN 969
Query: 292 MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHL 351
+++ + + + + + FP + + + ERD M L+++ E VVAVVG H+
Sbjct: 970 VVESLKTRANVRQMREFLEYQFPRVSKVFIEERDDIMFDALMRIRAER--VVAVVGMAHM 1027
Query: 352 QGIKNYWKQ 360
GI+ W++
Sbjct: 1028 DGIERRWEE 1036
>gi|58581797|ref|YP_200813.1| pheromone shutdown protein [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|58426391|gb|AAW75428.1| pheromone shutdown protein [Xanthomonas oryzae pv. oryzae KACC
10331]
Length = 410
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 20/293 (6%)
Query: 112 PVPEETKKVLPEEL---PRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFL 168
P+ E+T VL + L P +V E L+GTAHVS S V+ I
Sbjct: 4 PMTEQTTHVLDDALSGQPHRIV--------ERDGVRYTLLGTAHVSLASVAAVQRAIGSG 55
Query: 169 KPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIF 227
+ V +EL + R+ L+ P L + +++ + + + + ++A L+I
Sbjct: 56 RYDAVAVELDAQRLQALSDPDALARLDLVQVIRKGRVALFAANLALAAYQRRLAKQLDID 115
Query: 228 PGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAE 287
PG+E + A A G V L DR V +T +R ++ + K+KL L F
Sbjct: 116 PGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLGFFGKMKLAGGLLGGLFAADEVG 175
Query: 288 DLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLL-KVATEHSSVVAVV 346
+ ++++ DML + + P L ET++ ERDQYM++ L +V + ++AVV
Sbjct: 176 E--EEIEKLKQGDMLEASFGDFASESPELYETVIAERDQYMATRLREEVGADQREILAVV 233
Query: 347 GKGHLQGIKNYWKQ----PVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAI 395
G GHL G+ + +Q P P+ + + + + + L L V + G+ I
Sbjct: 234 GAGHLAGLARHLEQDTAAPGPLRESLEYVQQRKRIPWI-TLGILAVIITGIGI 285
>gi|302817282|ref|XP_002990317.1| hypothetical protein SELMODRAFT_428811 [Selaginella moellendorffii]
gi|300141879|gb|EFJ08586.1| hypothetical protein SELMODRAFT_428811 [Selaginella moellendorffii]
Length = 430
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 10/198 (5%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
+++LVGTAHVS +S EVE +I +KP +V +ELC R L ++ + K
Sbjct: 31 EIFLVGTAHVSAKSAEEVEEVIGIVKPDIVAVELCEERAKKLLAGYHDTSLFQKVQEFMK 90
Query: 204 -----KKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
K+ L + + A + LE PG EF+VA EEA ++L D+ +T+
Sbjct: 91 FPGGLKQKVVHLALSASYQAMREAGLE--PGKEFKVAMEEAKARRAGILLIDQRYDVTIS 148
Query: 259 RTWEKMPLWHKIKLL---YSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPT 315
+ + + + I LL + + Q S+ +L ++++ D + + M + FP+
Sbjct: 149 KLTKAIRIRDVINLLGIAGADMEQIVEGLSSGNLIESIEKLKRRDAVRKLTSFMDRTFPS 208
Query: 316 LMETLVHERDQYMSSTLL 333
+ ++HERD+YM+ LL
Sbjct: 209 AVRVMLHERDEYMTRQLL 226
>gi|288939839|ref|YP_003442079.1| TraB family protein [Allochromatium vinosum DSM 180]
gi|288895211|gb|ADC61047.1| TraB family protein [Allochromatium vinosum DSM 180]
Length = 400
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 115/251 (45%), Gaps = 12/251 (4%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDM 201
++ ++GTAHVS+ S +V +I V +ELC SR +++ P+ L + ++
Sbjct: 16 VELTVLGTAHVSRASADQVRKLIQSGDYDSVAVELCRSRFNALMDPRTLAQMDLFSVIRQ 75
Query: 202 WKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTW 261
+ ++ + + ++A I PG+E R A A G ++L DR + ITL+R
Sbjct: 76 NRVYMVVANLVLAAYQQRLADQFGIEPGAEQRTALRLAKDQGLNLLLVDREIGITLKRIS 135
Query: 262 EKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLV 321
+ W + L L A + S E ++ + + D+L E + L L+
Sbjct: 136 ANLGWWKRYGLFAGLL--AAMVSSDEVTEEEVERLKEGDVLETAFAEFAAERRDLYVPLI 193
Query: 322 HERDQYMSSTLLKVATEHSS--VVAVVGKGHLQGIKNYWK----QPVPV-HDLMTIPSPK 374
ERD+YM++ L + + + V+G GHL+G+ + P V DL +P P
Sbjct: 194 EERDRYMAARLRRELARVGARRALVVIGAGHLKGVTEALETDRTDPAEVLGDLERVPPPS 253
Query: 375 --PAVSALKVL 383
PAV +L
Sbjct: 254 RWPAVFGWTLL 264
>gi|452207524|ref|YP_007487646.1| TraB family protein [Natronomonas moolapensis 8.8.11]
gi|452083624|emb|CCQ36936.1| TraB family protein [Natronomonas moolapensis 8.8.11]
Length = 501
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 14/142 (9%)
Query: 142 TCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEM 198
T V +VGTAHVS+ S EVE++I+ +P VV +EL R L TP++L G++
Sbjct: 7 TGSVRVVGTAHVSEASVEEVESVIEAERPDVVAVELDEGRYRQLRGETPEDLDA---GDL 63
Query: 199 VDMWKKKHNTFGILYSWFL----AKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQ 254
+ + + + L W L A++ +I PGS+ + A E A G V L DR +Q
Sbjct: 64 L----RGNTVYQFLAYWMLSYVQARLGDRFDIEPGSDMKAAIENAEALGIDVALVDRDIQ 119
Query: 255 ITLRRTWEKMPLWHKIKLLYSF 276
+T++R W ++ + K+KL S
Sbjct: 120 VTIQRFWARLSAFEKLKLAGSL 141
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 284 PSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSV 342
P +DL + + M D D++ +++E + P E L+ ERD Y++ L+ + E +V
Sbjct: 215 PEDDDLQEIDIDRMTDTDVVGAMMEEFRRFSPGGAEALIDERDAYIAHQLVGLREEGRNV 274
Query: 343 VAVVGKGHLQGIKNYWKQP 361
VAVVG GH +GI+ Y + P
Sbjct: 275 VAVVGAGHREGIERYLETP 293
>gi|77024997|gb|ABA61423.1| TraB/PrgY-like protein [uncultured marine group II euryarchaeote
HF70_39H11]
Length = 347
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 10/208 (4%)
Query: 175 LELCSSRVSMLT-PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFR 233
+ELC R+ LT P T+G+++ K F + + K+ PG++
Sbjct: 3 VELCKGRLDALTQPDKFDNETLGKVLREGKAPLVLFQSMLAIEQRKMGLEEGEVPGTDLL 62
Query: 234 VAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRML 293
A + A + +V L DR +Q TLRR W KM K K+L + LF+ ++ +L
Sbjct: 63 AAIQAAAEADKEVALVDRDIQTTLRRAWRKMRFSEKRKVLMAVLFEEETTGDEVSVDELL 122
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQG 353
++ D++T ++ E+ + P E L+ ERD+++++++ ++ + V+AV+G GHL+G
Sbjct: 123 ---ENTDLITQLMDELREVAPAAGEVLIDERDEFLAASIQRLRS-RGKVLAVIGAGHLEG 178
Query: 354 IKNYWK-----QPVPVHDLMTIPSPKPA 376
+ N+ + + +L I P PA
Sbjct: 179 VANHLRGNQEPDKERMRELNFIAPPNPA 206
>gi|297619863|ref|YP_003707968.1| TraB family protein [Methanococcus voltae A3]
gi|297378840|gb|ADI36995.1| TraB family protein [Methanococcus voltae A3]
Length = 531
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 18/151 (11%)
Query: 216 FLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYS 275
F + +I PGSE + A ++ ++L DRP+ ITL R M L KIKL
Sbjct: 225 FQKSIGEKFDIKPGSEMKEAISLSINAQKPLLLMDRPIDITLSRLINSMSLKDKIKL--- 281
Query: 276 FLFQAFFLPSAEDL-------NRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYM 328
F + +ED+ N M+ D++ I+ + A PT LV ERD+YM
Sbjct: 282 --FTDLYSNDSEDIEIDKETINEMIGSADEL------IEILKDASPTFYTVLVDERDKYM 333
Query: 329 SSTLLKVATEHSSVVAVVGKGHLQGIKNYWK 359
+ L + +VA++G GH +GI NY K
Sbjct: 334 AKNLYDYSFGRDKIVAIIGAGHKKGIINYLK 364
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR 181
C+++L+GTAHVS +S +V + + P ++ +EL +R
Sbjct: 11 CEIHLIGTAHVSDKSIEDVSKAVKEINPDIIAIELDQNR 49
>gi|289665778|ref|ZP_06487359.1| pheromone shutdown protein [Xanthomonas campestris pv. vasculorum
NCPPB 702]
Length = 410
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 20/293 (6%)
Query: 112 PVPEETKKVLPEEL---PRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFL 168
P+ E+T VL + L P +V E L+GTAHVS S V+ I
Sbjct: 4 PMTEQTTHVLDDALSGQPHRIV--------ERDGVRYTLLGTAHVSLASVAAVQRTISSG 55
Query: 169 KPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIF 227
+ V +EL + R+ L+ P L + +++ + + + + ++A L I
Sbjct: 56 RYDAVAVELDAQRLQALSDPDALARLDLVQVIRKGRVALFAANLALAAYQRRLAKQLGIE 115
Query: 228 PGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAE 287
PG+E + A A G V L DR V +T +R ++ + K+KL L F
Sbjct: 116 PGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLGFFGKMKLAGGLLGGLFAADEVG 175
Query: 288 DLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLL-KVATEHSSVVAVV 346
+ ++++ DML + + P L ET++ ERDQYM++ L +V+ + ++AVV
Sbjct: 176 EEE--IEKLKQGDMLEASFGDFASESPELYETVIAERDQYMATRLREEVSADQREILAVV 233
Query: 347 GKGHLQGIKNYWKQ----PVPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVAI 395
G GHL G+ + +Q P P+ + + + + + L L V + G+ I
Sbjct: 234 GAGHLAGLARHLEQDTAAPGPLRESLEYVQQRKRIPWI-TLGILAVIITGIGI 285
>gi|196005933|ref|XP_002112833.1| hypothetical protein TRIADDRAFT_56379 [Trichoplax adhaerens]
gi|190584874|gb|EDV24943.1| hypothetical protein TRIADDRAFT_56379 [Trichoplax adhaerens]
Length = 171
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 61/104 (58%), Gaps = 9/104 (8%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+YL+GTAH SKESCREVE +I ++P VV +ELC SR S+ T ++ E +D+ K
Sbjct: 67 IYLIGTAHFSKESCREVEELIRAVQPDVVMIELCRSRASIATISEKRLIDEAENMDLRKV 126
Query: 205 K----HNTF--GILYSWFL---AKVASHLEIFPGSEFRVAFEEA 239
+ N GI++ F+ A + L + PG EFR A +EA
Sbjct: 127 RSVISQNGVLSGIVHLLFINLTASITKQLGVAPGCEFRAAVKEA 170
>gi|428183121|gb|EKX51980.1| hypothetical protein GUITHDRAFT_134290 [Guillardia theta CCMP2712]
Length = 355
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 42/226 (18%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
++++VGT+H+S++S +V+ +I ++P V +ELC SR ++ V + +W
Sbjct: 96 EIFVVGTSHISRKSAEDVDRVIRAVRPDNVVVELCRSRAGIMYADGGDVEK-SNALSIWG 154
Query: 204 K-------KHNTFGILYSWFLAKVASHLEIFP------GSEFRVAFEEAMKYGGKVILGD 250
+ + G + L + + + G +FR A + A G ++LGD
Sbjct: 155 NDPIKALSRSISLGGPVALLLRVLLARNPVLQQTLKETGIDFRAARKAAEDVGATIVLGD 214
Query: 251 RPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMS 310
RP++IT+ R + + LFQ D D+L + + ++
Sbjct: 215 RPIEITIERAFRSLSKQE--------LFQ------------------DKDILEGLEKSLA 248
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVATEHSS--VVAVVGKGHLQGI 354
+++P+L+E L+ ERD ++S T + VVAVVGKGH +G+
Sbjct: 249 ESYPSLLEPLIVERDIFLSLTAKSSMAVNGCKRVVAVVGKGHAKGV 294
>gi|78048059|ref|YP_364234.1| TraB family membrane protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325927482|ref|ZP_08188724.1| pheromone shutdown-related protein TraB [Xanthomonas perforans
91-118]
gi|346725205|ref|YP_004851874.1| pheromone shutdown protein [Xanthomonas axonopodis pv. citrumelo
F1]
gi|78036489|emb|CAJ24180.1| putative TraB family membrane protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325542145|gb|EGD13645.1| pheromone shutdown-related protein TraB [Xanthomonas perforans
91-118]
gi|346649952|gb|AEO42576.1| pheromone shutdown protein [Xanthomonas axonopodis pv. citrumelo
F1]
Length = 406
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 120/255 (47%), Gaps = 9/255 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S V+ I + V +EL + R+ L+ P L + +++ +
Sbjct: 30 LLGTAHVSLASVAAVQRAIGSGRYDAVAVELDAQRLQALSDPDALARLDLVQVIRKGRVA 89
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A G V L DR V +T +R ++
Sbjct: 90 LFAANLALAAYQRRLAKQLGIEPGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLG 149
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL L F + ++++ DML + + P L ET++ ERD
Sbjct: 150 FFGKMKLAGGLLGGLFAADEVGEEE--IEKLKQGDMLEASFGDFASESPELYETVIAERD 207
Query: 326 QYMSSTLL-KVATEHSSVVAVVGKGHLQGIKNYWKQ----PVPVHDLMTIPSPKPAVSAL 380
QYM++ L +V E ++AVVG GHL G+ + +Q P P+ + + + + +
Sbjct: 208 QYMATRLREEVGAEQREILAVVGAGHLAGLARHLEQDTAAPGPLRESLEYVQQRKRIPWI 267
Query: 381 KVLSSLGVAVAGVAI 395
L L V + G+ I
Sbjct: 268 -TLGILAVIITGIGI 281
>gi|323451601|gb|EGB07478.1| hypothetical protein AURANDRAFT_64860 [Aureococcus anophagefferens]
Length = 311
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 104/246 (42%), Gaps = 34/246 (13%)
Query: 134 CD---STAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN- 189
CD S G VYLVGTAHVS S R V ID ++P +V +EL RV +
Sbjct: 53 CDEAVSALANGKSTVYLVGTAHVSDVSARLVAETIDAVRPTLVMVELDGKRVQGFGGEAP 112
Query: 190 -----LKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGG 244
L VG+ + + +L S + K L + G EF VA +A G
Sbjct: 113 GPATPLAPAPVGQRLGAFV----VGAVLRSLY--KSLERLGLDTGEEFAVALRKARSAGV 166
Query: 245 KVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPS-AEDLNRM--LKEMDDV-- 299
V+L DR V TLR + + L F+A P+ A DL R + D V
Sbjct: 167 PVLLADRDVDETLRLVGDAVRKTTSKDLEN---FEAALSPALAGDLTRAVDVASRDSVAS 223
Query: 300 --------DMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLK---VATEHSSVVAVVGK 348
+ + ++ + P L + LV RD YM+++LL A VVAVVG
Sbjct: 224 TVELVKKRETVRTIVAALEANAPALYDALVDSRDAYMAASLLDRLGAAGPGQRVVAVVGM 283
Query: 349 GHLQGI 354
H GI
Sbjct: 284 AHEDGI 289
>gi|84623700|ref|YP_451072.1| pheromone shutdown protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188576649|ref|YP_001913578.1| pheromone shutdown protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|84367640|dbj|BAE68798.1| pheromone shutdown protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188521101|gb|ACD59046.1| pheromone shutdown protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 406
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 9/255 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S V+ I + V +EL + R+ L+ P L + +++ +
Sbjct: 30 LLGTAHVSLASVAAVQRAIGSGRYDAVAVELDAQRLQALSDPDALARLDLVQVIRKGRVA 89
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L+I PG+E + A A G V L DR V +T +R ++
Sbjct: 90 LFAANLALAAYQRRLAKQLDIDPGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLG 149
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL L F + ++++ DML + + P L ET++ ERD
Sbjct: 150 FFGKMKLAGGLLGGLFAADEVGE--EEIEKLKQGDMLEASFGDFASESPELYETVIAERD 207
Query: 326 QYMSSTLL-KVATEHSSVVAVVGKGHLQGIKNYWKQ----PVPVHDLMTIPSPKPAVSAL 380
QYM++ L +V + ++AVVG GHL G+ + +Q P P+ + + + + +
Sbjct: 208 QYMATRLREEVGADQREILAVVGAGHLAGLARHLEQDTAAPGPLRESLEYVQQRKRIPWI 267
Query: 381 KVLSSLGVAVAGVAI 395
L L V + G+ I
Sbjct: 268 -TLGILAVIITGIGI 281
>gi|389852372|ref|YP_006354606.1| pheromone shutdown protein (traB) [Pyrococcus sp. ST04]
gi|388249678|gb|AFK22531.1| pheromone shutdown protein (traB) [Pyrococcus sp. ST04]
Length = 223
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 32/223 (14%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPTVGEMVDMWK 203
V ++GT HV +ES EV II +P V +EL R V +L + L T+ + + M K
Sbjct: 7 VRVIGTVHVLRESIEEVRRIILEERPDAVAIELDHGRLVGLLRKEKL---TLSQALRMGK 63
Query: 204 KKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
GIL + L +V +++ FPG E A+E AM V L D+P+ ITL++
Sbjct: 64 -----VGIL-GYILQEVENYIGRDFGAFPGEEMIEAYEIAMSLRIPVYLIDQPIHITLQK 117
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
P K++ L + F + +E+D D + +E +PT
Sbjct: 118 LL-AAPTVEKLRALSEIVSIPF----------IRREIDLSDYRAME-REFKSKYPTFYRV 165
Query: 320 LVHERDQYMSSTLLKVA------TEHSSVVAVVGKGHLQGIKN 356
LV ER+QYM+ L+++ + + V+AVVG GH +GI+
Sbjct: 166 LVEERNQYMAKNLMRIVDSILEEKKKAKVIAVVGLGHKKGIEK 208
>gi|189912923|ref|YP_001964812.1| Pheromone shutdown protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|189913248|ref|YP_001964477.1| Pheromone shutdown protein, TraB family [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|167777599|gb|ABZ95899.1| Pheromone shutdown protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167781316|gb|ABZ99613.1| Pheromone shutdown protein, TraB family [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 407
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 20/226 (8%)
Query: 112 PVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQ 171
P + TKK + P + T D T +V+++GTAH+SK+S EVE +I +KP
Sbjct: 9 PTRKSTKKGFKTKEP--YLFKTIDKT------EVHILGTAHISKQSVEEVEKMIQSIKPD 60
Query: 172 VVFLELCSSRV-SMLTPQNLK---VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIF 227
V+ +ELC SR+ S+ P LK + V + MW + + K + +I
Sbjct: 61 VICVELCESRMKSVEDPDYLKKLDIFKVFKERKMWLLLSSLILSSFQ----KKMGNQDIK 116
Query: 228 PGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAE 287
PG E R A V+ DR +Q TL+R+W + + K +Y F L E
Sbjct: 117 PGDEMRKAITLGRTLKKPVLAVDREIQTTLKRSWGNVGFFSK---MYLFSALLASLLVKE 173
Query: 288 DL-NRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL 332
D+ + ++EM D+L + ++ K + ++ ++ ERD Y++ +
Sbjct: 174 DVSDEKIEEMKSDDILKDLFSQIPKKYESVKNVIIDERDIYLAEKI 219
>gi|294664325|ref|ZP_06729690.1| pheromone shutdown protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292605891|gb|EFF49177.1| pheromone shutdown protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 410
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 121/255 (47%), Gaps = 9/255 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S V+ I + V +EL + R+ L+ P L + +++ +
Sbjct: 34 LLGTAHVSLASVAAVQRAIGSGRYDAVAVELDAQRLQALSDPDALARLDLVQVIRKGRVA 93
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A G V L DR V +T +R ++
Sbjct: 94 LFAANLALAAYQRRLAKQLGIEPGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLG 153
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL L F + ++++ DML + + P L ET++ ERD
Sbjct: 154 FFGKMKLAGGLLGGLFAADEVGE--EEIEKLKQGDMLEASFGDFASESPELYETVIAERD 211
Query: 326 QYMSSTLL-KVATEHSSVVAVVGKGHLQGIKNYWKQ----PVPVHDLMTIPSPKPAVSAL 380
QYM++ L +V+ + ++AVVG GHL G+ + +Q P P+ + + + + +
Sbjct: 212 QYMATRLREEVSADQREILAVVGAGHLAGLARHLEQDTAAPGPLRESLEYVQQRKRIPWI 271
Query: 381 KVLSSLGVAVAGVAI 395
L L V V G+ I
Sbjct: 272 -TLGILAVIVTGIGI 285
>gi|448727792|ref|ZP_21710141.1| hypothetical protein C448_13951 [Halococcus morrhuae DSM 1307]
gi|445789778|gb|EMA40457.1| hypothetical protein C448_13951 [Halococcus morrhuae DSM 1307]
Length = 497
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Query: 134 CDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVP 193
DSTA V +VGTAHVS ES EVE I +P VV +EL R L +
Sbjct: 2 SDSTATTDEGSVRVVGTAHVSPESVGEVERTITEERPDVVAVELDEGRFRQLKGEQPDDL 61
Query: 194 TVGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILG 249
+ G+++ + + F L W L+ V + L +I PG++ A E A ++G V L
Sbjct: 62 SAGDLL----RGNTVFQFLAYWMLSYVQTRLGDEFDINPGADMLAAVETAEEFGSNVALV 117
Query: 250 DRPVQITLRRTWEKMPLWHKIKLLYSF 276
DR +Q+T++R W +M K+ +L S
Sbjct: 118 DRDIQMTIQRFWARMTAGEKLSMLLSL 144
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 43/69 (62%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
+++M D D+++ +++E P E L+ ERD +++ L+ + + VVAVVG GH +
Sbjct: 229 IEDMTDTDVVSTMLEEFRAFSPGGAEALIDERDAFIAHRLVALREQGHRVVAVVGAGHRE 288
Query: 353 GIKNYWKQP 361
GI+ Y ++P
Sbjct: 289 GIERYLREP 297
>gi|294624743|ref|ZP_06703409.1| pheromone shutdown protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292600977|gb|EFF45048.1| pheromone shutdown protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 410
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 121/255 (47%), Gaps = 9/255 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S V+ I + V +EL + R+ L+ P L + +++ +
Sbjct: 34 LLGTAHVSLASVAAVQRAIGSGRYDAVAVELDAQRLQALSDPDALARLDLVQVIRKGRVA 93
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A G V L DR V +T +R ++
Sbjct: 94 LFAANLALAAYQRRLAKQLGIEPGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLG 153
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL L F + ++++ DML + + P L ET++ ERD
Sbjct: 154 FFGKMKLAGGLLGGLFAADEVGEEE--IEKLKQGDMLEASFGDFASESPELYETVIAERD 211
Query: 326 QYMSSTLL-KVATEHSSVVAVVGKGHLQGIKNYWKQ----PVPVHDLMTIPSPKPAVSAL 380
QYM++ L +V+ + ++AVVG GHL G+ + +Q P P+ + + + + +
Sbjct: 212 QYMATRLREEVSADQREILAVVGAGHLAGLARHLEQDTAAPGPLRESLEYVQQRKRIPWI 271
Query: 381 KVLSSLGVAVAGVAI 395
L L V V G+ I
Sbjct: 272 -TLGILAVIVTGIGI 285
>gi|448738906|ref|ZP_21720927.1| hypothetical protein C451_15275 [Halococcus thailandensis JCM
13552]
gi|445801292|gb|EMA51636.1| hypothetical protein C451_15275 [Halococcus thailandensis JCM
13552]
Length = 497
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Query: 134 CDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVP 193
DSTA V +VGTAHVS ES EVE I +P VV +EL R L +
Sbjct: 2 SDSTATTDEGSVRVVGTAHVSPESVGEVERTIAEERPDVVAVELDEGRFRQLKGEQPDDL 61
Query: 194 TVGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILG 249
+ G+++ + + F L W L+ V + L +I PG++ A E A ++G V L
Sbjct: 62 SAGDLL----RGNTVFQFLAYWMLSYVQTRLGDEFDINPGADMLAAVETAEEFGSNVALV 117
Query: 250 DRPVQITLRRTWEKMPLWHKIKLLYSF 276
DR +Q+T++R W +M K+ +L S
Sbjct: 118 DRDIQMTIQRFWARMTAGEKLSMLLSL 144
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
+++M D D+++ +++E P E L+ ERD +++ L+ + + VVAVVG GH +
Sbjct: 229 IEDMTDTDVVSTMLEEFRAFSPGGAEALIDERDAFIAHRLVALREQGHRVVAVVGAGHRE 288
Query: 353 GIKNYWKQP 361
GI+ Y + P
Sbjct: 289 GIERYLRNP 297
>gi|257388787|ref|YP_003178560.1| TraB family protein [Halomicrobium mukohataei DSM 12286]
gi|257171094|gb|ACV48853.1| TraB family protein [Halomicrobium mukohataei DSM 12286]
Length = 523
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
Query: 140 GGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVG 196
GG V +VGTAHVS++S EVE I+ +P VV +EL R + TP++L +
Sbjct: 16 GGEGRVTVVGTAHVSQDSVEEVERTIEDEQPDVVAVELDEGRYRQMKGETPEDLDASDL- 74
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRP 252
+ + F L W L+ V + L ++ PG++ A E A + G V L DR
Sbjct: 75 ------LRGNTVFQFLAYWMLSYVQTRLGDRFDVSPGADMMAAVETAERNGLGVALVDRD 128
Query: 253 VQITLRRTWEKMPLWHKIKLLYSFL 277
+Q+T++R W ++ W K+ L+ +
Sbjct: 129 IQMTVQRFWARLSFWEKLSLVGALF 153
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQG 353
E+ DVD++T +++E + P E L+ ERD Y++ L+ + VVA+VG GH G
Sbjct: 247 AELTDVDVVTAMMEEFRQFSPGGAEALIDERDAYIAHNLVDLRDAGYHVVAIVGAGHRAG 306
Query: 354 IKNYWKQP 361
I+ Y P
Sbjct: 307 IERYLDHP 314
>gi|390989621|ref|ZP_10259917.1| TraB family protein [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|372555682|emb|CCF66892.1| TraB family protein [Xanthomonas axonopodis pv. punicae str. LMG
859]
Length = 406
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 9/255 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S V+ I + V +EL + R+ L+ P L + +++ +
Sbjct: 30 LLGTAHVSLASVAAVQRAIGSGRYDAVAVELDAQRLQALSDPDALARLDLVQVIRKGRVA 89
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A G V L DR V +T +R ++
Sbjct: 90 LFAANLALAAYQRRLAKQLGIEPGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLG 149
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL L F + ++++ DML + + P L ET++ ERD
Sbjct: 150 FFGKMKLAGGLLGGLFAADEVGE--EEIEKLKQGDMLEASFGDFASESPELYETVIDERD 207
Query: 326 QYMSSTLL-KVATEHSSVVAVVGKGHLQGIKNYWKQ----PVPVHDLMTIPSPKPAVSAL 380
QYM++ L +V + ++AVVG GHL G+ + +Q P P+ + + + + +
Sbjct: 208 QYMATRLREEVGADQREILAVVGAGHLAGLARHLEQDTAAPGPLRESLEYVQQRKRIPWI 267
Query: 381 KVLSSLGVAVAGVAI 395
L L V + G+ I
Sbjct: 268 -TLGILAVIITGIGI 281
>gi|14590980|ref|NP_143055.1| hypothetical protein PH1152 [Pyrococcus horikoshii OT3]
gi|3257569|dbj|BAA30252.1| 223aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 223
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 35/232 (15%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-------PQNLKVPTVGE 197
V ++GT HVS +S +EV II P V +EL R+ L Q +K+ +G
Sbjct: 10 VRIIGTVHVSPQSVKEVRNIILRENPDAVAVELDYGRLLSLLNGSSLTFSQAIKLGKIGI 69
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ + + G + + PGSE AFE A G + + D P+Q+TL
Sbjct: 70 LAYLLQGVEMALG-----------KQVGVLPGSEMIEAFEVARSLGIPIYMIDMPIQVTL 118
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLM 317
+R + +P+ KI+ + +F + P E LN ++D L L E + +PT+
Sbjct: 119 KRLFS-VPIEEKIRGIIE-IFLSIVYPKVE-LN-----LEDYISLEL---EFKRKYPTVY 167
Query: 318 ETLVHERDQYMSSTLLKVA------TEHSSVVAVVGKGHLQGIKNYWKQPVP 363
+ LV ER+++M+ L+++ + ++AVVG GH +GI+ P
Sbjct: 168 KILVEERNEFMARNLMRIVDILLERKKKIKIIAVVGLGHKRGIERILSHYSP 219
>gi|21243040|ref|NP_642622.1| pheromone shutdown protein [Xanthomonas axonopodis pv. citri str.
306]
gi|418516558|ref|ZP_13082731.1| pheromone shutdown protein [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
gi|418522548|ref|ZP_13088582.1| pheromone shutdown protein [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|21108550|gb|AAM37158.1| pheromone shutdown protein [Xanthomonas axonopodis pv. citri str.
306]
gi|410701020|gb|EKQ59553.1| pheromone shutdown protein [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|410706837|gb|EKQ65294.1| pheromone shutdown protein [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
Length = 410
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 9/255 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S V+ I + V +EL + R+ L+ P L + +++ +
Sbjct: 34 LLGTAHVSLASVAAVQRAIGSGRYDAVAVELDAQRLQALSDPDALARLDLVQVIRKGRVA 93
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A G V L DR V +T +R ++
Sbjct: 94 LFAANLALAAYQRRLAKQLGIEPGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLG 153
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL L F + ++++ DML + + P L ET++ ERD
Sbjct: 154 FFGKMKLAGGLLGGLFAADEVGEEE--IEKLKQGDMLEASFGDFASESPELYETVIAERD 211
Query: 326 QYMSSTLL-KVATEHSSVVAVVGKGHLQGIKNYWKQ----PVPVHDLMTIPSPKPAVSAL 380
QYM++ L +V + ++AVVG GHL G+ + +Q P P+ + + + + +
Sbjct: 212 QYMATRLREEVGADQREILAVVGAGHLAGLARHLEQDTAAPGPLRESLEYVQQRKRIPWI 271
Query: 381 KVLSSLGVAVAGVAI 395
L L V + G+ I
Sbjct: 272 -TLGILAVIITGIGI 285
>gi|196005931|ref|XP_002112832.1| hypothetical protein TRIADDRAFT_56378 [Trichoplax adhaerens]
gi|190584873|gb|EDV24942.1| hypothetical protein TRIADDRAFT_56378 [Trichoplax adhaerens]
Length = 163
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 77/134 (57%), Gaps = 17/134 (12%)
Query: 248 LGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQ 307
LGDRP++IT++RT + +W +IKL+Y+ + + E +++M D D+L ++
Sbjct: 3 LGDRPIEITMKRTVASLSIWQRIKLVYNLITSDKNITKEE-----IEKMKDQDLLMELLH 57
Query: 308 EMSKAFPTLMETLVHERDQYMSSTLLK---VATEHSSVV---------AVVGKGHLQGIK 355
E++ FP+L +V ERD Y++ +LL+ +A+ H + VVG GH+ GI
Sbjct: 58 EITDTFPSLARVIVDERDAYLAYSLLQAKEIASRHLDTLWDPQPPVVVGVVGLGHIHGIV 117
Query: 356 NYWKQPVPVHDLMT 369
W +P+ V +L++
Sbjct: 118 ENWGKPIDVQELLS 131
>gi|384419617|ref|YP_005628977.1| pheromone shutdown protein [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353462530|gb|AEQ96809.1| pheromone shutdown protein [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 406
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 9/255 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S V+ I + V +EL + R+ L+ P L + +++ +
Sbjct: 30 LLGTAHVSLASVAAVQRAIGSGRYDAVAVELDAQRLQALSDPDALARLDLVQVIRKGRVA 89
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A G V L DR V +T +R ++
Sbjct: 90 LFAANLALAAYQRRLAKQLGIDPGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLG 149
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL L F + ++++ DML + + P L ET++ ERD
Sbjct: 150 FFGKMKLAGGLLGGLFAADEVGE--EEIEKLKQGDMLEASFGDFASESPELYETVIAERD 207
Query: 326 QYMSSTLL-KVATEHSSVVAVVGKGHLQGIKNYWKQ----PVPVHDLMTIPSPKPAVSAL 380
QYM++ L +V + ++AVVG GHL G+ + +Q P P+ + + + + +
Sbjct: 208 QYMATRLREEVGADQREILAVVGAGHLAGLARHLEQDTAAPGPLRESLEYVQQRKRIPWI 267
Query: 381 KVLSSLGVAVAGVAI 395
L L V + G+ I
Sbjct: 268 -TLGILAVIITGIGI 281
>gi|297624151|ref|YP_003705585.1| TraB family protein [Truepera radiovictrix DSM 17093]
gi|297165331|gb|ADI15042.1| TraB family protein [Truepera radiovictrix DSM 17093]
Length = 407
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 10/229 (4%)
Query: 135 DSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVP 193
D T +G D L+GTAHVS+ S EVE +I V +EL + R ++ P
Sbjct: 17 DVTLKG--VDFTLLGTAHVSRTSADEVERLIQTGDFDAVAVELDAGRFGAISDPDRWAKT 74
Query: 194 TVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ E+ K + F ++A + PG E R A A G ++L DR +
Sbjct: 75 DLFEVFREGKAAMMAASLALGAFQQRLAEQSGVEPGEEMRRAVRLARARGLPLLLIDRDL 134
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAF 313
+TLRR + +P W ++ L+ L L E ++++ + D+L E ++
Sbjct: 135 GVTLRRVYGNVPWWQRLVLIGGLL--GSVLSRDEVTPEEVEKLKEGDVLEATFAEFAEDS 192
Query: 314 PTLMETLVHERDQYMSSTLLKVATEHSS-----VVAVVGKGHLQGIKNY 357
L E L+ ERD+YM++ L + V+ V+G GHL+G+ +
Sbjct: 193 AALFEPLIRERDRYMAARLREEVWRDGEPRFKRVLVVIGAGHLKGVAEH 241
>gi|448318262|ref|ZP_21507790.1| TraB determinant protein [Natronococcus jeotgali DSM 18795]
gi|445599724|gb|ELY53752.1| TraB determinant protein [Natronococcus jeotgali DSM 18795]
Length = 590
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 137 TAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVG 196
A GG V ++GTAHVS+ S EV +D KP VV +EL +R + P
Sbjct: 15 AAGGGQGSVDVLGTAHVSQASVDEVHETVDERKPDVVAVELDENRYRQMQG---GAPDDI 71
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRP 252
E D+ + F L W L+ V S L +I PG++ R A E A + G V L DR
Sbjct: 72 EATDL-LSGNTVFQFLAYWMLSYVQSRLGSRFDIEPGADMRAAIEAAERNGSGVALVDRD 130
Query: 253 VQITLRRTWEKMPLWHKIKLL 273
+QIT++R W ++ + K+K++
Sbjct: 131 IQITIQRFWTRLSIAEKLKMV 151
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 286 AEDLNRM----LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSS 341
AED + + ++EM D D++ +++E + P E L+ ERD Y++ L + +
Sbjct: 311 AEDTDDLEEIDIEEMTDGDVVAAMMEEFRRFSPRGAEALIDERDAYIAHKLHGLREQGYH 370
Query: 342 VVAVVGKGHLQGIKNYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
VVAVVG GH GI+ Y P +P + +T + + S LK++ L
Sbjct: 371 VVAVVGAGHKAGIERYLSNPAELPPMESLTGTASERRFSPLKIVGYL 417
>gi|332159417|ref|YP_004424696.1| hypothetical protein PNA2_1778 [Pyrococcus sp. NA2]
gi|331034880|gb|AEC52692.1| hypothetical protein PNA2_1778 [Pyrococcus sp. NA2]
Length = 220
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 36/232 (15%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWK 203
V ++GT HVS++S ++V +I P + LEL R+ ++L+ L T + + + K
Sbjct: 7 VKVIGTVHVSQDSVKKVRQVILSEDPDAIALELDYERLLALLSGATL---TFSQALKLGK 63
Query: 204 KKHNTFGILYSWFLAKV----ASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
+ GIL ++ L ++ PG E AF A G + + DRP+QITL R
Sbjct: 64 R-----GIL-AYILQEIEIAIGKEAGTIPGGEMIEAFNVARSLGIPIYVIDRPIQITLSR 117
Query: 260 TWEKMPLWHKIKLLYSFLFQAFF--LPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLM 317
+PL KI+ L L F + + ED T + E + +PT+
Sbjct: 118 LL-TIPLSEKIRGLVEILGVLLFPRVQANEDY-------------TSLRMEFQRKYPTMY 163
Query: 318 ETLVHERDQYMSSTLLKVA------TEHSSVVAVVGKGHLQGIKNYWKQPVP 363
+ LV ERD++M+ L+++ + V+AVVG GH +GI+ + P
Sbjct: 164 KILVEERDEFMAQNLMRIVDALLERKKKIKVIAVVGLGHKRGIERILSRHSP 215
>gi|289671213|ref|ZP_06492288.1| pheromone shutdown protein [Xanthomonas campestris pv. musacearum
NCPPB 4381]
Length = 406
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 9/255 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S V+ I + V +EL + R+ L+ P L + +++ +
Sbjct: 30 LLGTAHVSLASVAAVQRAISSGRYDAVAVELDAQRLQALSDPDALARLDLVQVIRKGRVA 89
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A G V L DR V +T +R ++
Sbjct: 90 LFAANLALAAYQRRLAKQLGIEPGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLG 149
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL L F + ++++ DML + + P L ET++ ERD
Sbjct: 150 FFGKMKLAGGLLGGLFAADEVGE--EEIEKLKQGDMLEASFGDFASESPELYETVIAERD 207
Query: 326 QYMSSTLL-KVATEHSSVVAVVGKGHLQGIKNYWKQ----PVPVHDLMTIPSPKPAVSAL 380
QYM++ L +V+ + ++AVVG GHL G+ + +Q P P+ + + + + +
Sbjct: 208 QYMAARLREEVSADQREILAVVGAGHLAGLARHLEQDTAAPGPLRESLEYVQQRKRIPWI 267
Query: 381 KVLSSLGVAVAGVAI 395
L L V + G+ I
Sbjct: 268 -TLGILAVIITGIGI 281
>gi|448449397|ref|ZP_21591726.1| TraB determinant protein [Halorubrum litoreum JCM 13561]
gi|445813488|gb|EMA63466.1| TraB determinant protein [Halorubrum litoreum JCM 13561]
Length = 591
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 17/151 (11%)
Query: 135 DSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLK 191
D+ EG V +VGTAHVS+ S EVE ID +P VV +EL R L TP +L
Sbjct: 33 DAAGEG---SVTVVGTAHVSERSVDEVEETIDRERPDVVAVELDEGRYRQLNGETPDDLD 89
Query: 192 VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVI 247
G+++ + + F L W L+ V + L +I PG++ + A + A G V
Sbjct: 90 A---GDLL----RGNTVFQFLAYWMLSYVQTQLGERFDIEPGADMKAAVDVAESLGIDVA 142
Query: 248 LGDRPVQITLRRTWEKMPLWHKIKLLYSFLF 278
L DR +Q T++R W +M + K++L+ F
Sbjct: 143 LVDRDIQTTIQRFWARMTVTEKLRLVGGLAF 173
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQG 353
++ D D++T++++E + P E L+ ERD +++ L+ + VVAVVG GH G
Sbjct: 320 ADLTDTDVVTMMMEEFRQFSPGGAEALIDERDAFIAHRLVALREAGHDVVAVVGAGHRAG 379
Query: 354 IKNYWKQPV---PVHDLMTIPSPK 374
I+ Y + P P+ DL+ S +
Sbjct: 380 IEGYLRDPATLPPMEDLVGQESGR 403
>gi|448423425|ref|ZP_21581967.1| TraB determinant protein [Halorubrum terrestre JCM 10247]
gi|445683478|gb|ELZ35873.1| TraB determinant protein [Halorubrum terrestre JCM 10247]
Length = 591
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 17/151 (11%)
Query: 135 DSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLK 191
D+ EG V +VGTAHVS+ S EVE ID +P VV +EL R L TP +L
Sbjct: 33 DAAGEG---SVTVVGTAHVSERSVDEVEETIDRERPDVVAVELDEGRYRQLNGETPDDLD 89
Query: 192 VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVI 247
G+++ + + F L W L+ V + L +I PG++ + A + A G V
Sbjct: 90 A---GDLL----RGNTVFQFLAYWMLSYVQTQLGERFDIEPGADMKAAVDVAESLGIDVA 142
Query: 248 LGDRPVQITLRRTWEKMPLWHKIKLLYSFLF 278
L DR +Q T++R W +M + K++L+ F
Sbjct: 143 LVDRDIQTTIQRFWARMTVTEKLRLVGGLAF 173
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQG 353
++ D D++T++++E + P E L+ ERD +++ L+ + VVAVVG GH G
Sbjct: 320 ADLTDTDVVTMMMEEFRQFSPGGAEALIDERDAFIAHRLIALREAGHDVVAVVGAGHRAG 379
Query: 354 IKNYWKQPV---PVHDLMTIPSPK 374
I+ Y + P P+ DL+ S +
Sbjct: 380 IEGYLRDPATLPPMEDLVGQESGR 403
>gi|448480097|ref|ZP_21604491.1| TraB determinant protein [Halorubrum arcis JCM 13916]
gi|448507213|ref|ZP_21614853.1| TraB determinant protein [Halorubrum distributum JCM 9100]
gi|448523867|ref|ZP_21619054.1| TraB determinant protein [Halorubrum distributum JCM 10118]
gi|445698935|gb|ELZ50971.1| TraB determinant protein [Halorubrum distributum JCM 9100]
gi|445700940|gb|ELZ52931.1| TraB determinant protein [Halorubrum distributum JCM 10118]
gi|445822282|gb|EMA72052.1| TraB determinant protein [Halorubrum arcis JCM 13916]
Length = 591
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 17/151 (11%)
Query: 135 DSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLK 191
D+ EG V +VGTAHVS+ S EVE ID +P VV +EL R L TP +L
Sbjct: 33 DAAGEG---SVTVVGTAHVSERSVDEVEETIDRERPDVVAVELDEGRYRQLNGETPDDLD 89
Query: 192 VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVI 247
G+++ + + F L W L+ V + L +I PG++ + A + A G V
Sbjct: 90 A---GDLL----RGNTVFQFLAYWMLSYVQTQLGERFDIEPGADMKAAVDVAESLGIDVA 142
Query: 248 LGDRPVQITLRRTWEKMPLWHKIKLLYSFLF 278
L DR +Q T++R W +M + K++L+ F
Sbjct: 143 LVDRDIQTTIQRFWARMTVTEKLRLVGGLAF 173
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQG 353
++ D D++T++++E + P E L+ ERD +++ L+ + VVAVVG GH G
Sbjct: 320 ADLTDTDVVTMMMEEFRQFSPGGAEALIDERDAFIAHRLVALREAGHDVVAVVGAGHRAG 379
Query: 354 IKNYWKQPV---PVHDLMTIPSPK 374
I+ Y + P P+ DL+ S +
Sbjct: 380 IEGYLRDPATLPPMEDLVGQESGR 403
>gi|435847005|ref|YP_007309255.1| putative PrgY-like protein, pheromone shutdown like protein
[Natronococcus occultus SP4]
gi|433673273|gb|AGB37465.1| putative PrgY-like protein, pheromone shutdown like protein
[Natronococcus occultus SP4]
Length = 590
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 17/147 (11%)
Query: 135 DSTAEG-GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNL 190
D+ EG G+ DV +GTAHVSK S EV +D +P VV +EL +R + TP ++
Sbjct: 14 DAAGEGRGSVDV--LGTAHVSKASVEEVHETVDEREPDVVAVELDENRYRQMQGGTPDDI 71
Query: 191 KVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKV 246
+ + + F L W L+ V S L +I PG++ R A E A + G V
Sbjct: 72 EAKDL-------LSGNTVFQFLAYWMLSYVQSRLGSRFDIEPGADMRAAIEAAERNGSGV 124
Query: 247 ILGDRPVQITLRRTWEKMPLWHKIKLL 273
L DR +QIT++R W ++ K+K++
Sbjct: 125 ALVDRDIQITIQRFWTRLSFAEKLKMV 151
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
M D D++ +++E + P E L+ ERD Y++ L + + VVAVVG GH GI+
Sbjct: 325 MTDGDVVAAMMEEFRRFSPRGAEALIDERDAYIAHKLHGLREQGYHVVAVVGAGHKAGIE 384
Query: 356 NYWKQP 361
Y + P
Sbjct: 385 RYLENP 390
>gi|222479291|ref|YP_002565528.1| TraB determinant protein [Halorubrum lacusprofundi ATCC 49239]
gi|222452193|gb|ACM56458.1| TraB determinant protein [Halorubrum lacusprofundi ATCC 49239]
Length = 603
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 16/174 (9%)
Query: 112 PVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQ 171
P ++ + E P S T + E G+ V +VGTAHVSK+S EVE I+ +P
Sbjct: 22 PTASDSAPIDGEGSPASGAAGTPAAGDESGS--VTVVGTAHVSKQSVDEVEETIERERPD 79
Query: 172 VVFLELCSSRVSML---TPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHL---- 224
VV +EL R + +P +L + + + F L W L+ V + L
Sbjct: 80 VVAVELDEGRYRQMNGESPDDLDASDL-------LRGNTVFQFLAYWMLSYVQTQLGDRF 132
Query: 225 EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLF 278
+I PG++ R A + A G V L DR +Q T++R W +M L K++++ F
Sbjct: 133 DIEPGADMRAAIDVAEGLGIDVALVDRDIQTTIQRFWARMSLTEKLRMVGGLAF 186
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
++++ D D++T++++E + P E L+ ERD +++ L+ + +VVAVVG GH
Sbjct: 332 MEDLTDTDVVTMMMEEFRQFSPGGAEALIDERDAFIAHRLVALREAGHNVVAVVGAGHRA 391
Query: 353 GIKNYWKQPV---PVHDLM 368
GI+ Y P P+ DL+
Sbjct: 392 GIEGYLADPASLPPMEDLV 410
>gi|285018386|ref|YP_003376097.1| trab family membrane protein [Xanthomonas albilineans GPE PC73]
gi|283473604|emb|CBA16107.1| putative trab family membrane protein [Xanthomonas albilineans GPE
PC73]
Length = 411
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 10/219 (4%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS+ S VE I+ + V +EL R+ LT P L + +++ +
Sbjct: 29 LLGTAHVSQASVAVVERAIESGRFDAVAVELDPQRLQALTDPDALTKLDLVQVIRKGRVA 88
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A + V L DR V +T +R ++
Sbjct: 89 LFAANLALAAYQRRLAEQLGIEPGAELKRAVLLARERQLPVYLVDREVGLTFKRASSRLG 148
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
L+ K+KL L F S E ++++ DML + + P L T++ ERD
Sbjct: 149 LFGKLKLASGLLGGLF--ASEEVGEAEIEKLKQGDMLEASFGDFASESPELYATIIAERD 206
Query: 326 QYMSSTLLK-----VATEHS--SVVAVVGKGHLQGIKNY 357
+YM++ L + A HS V+AVVG GHL G+ +
Sbjct: 207 RYMATRLREEHAHGEAHRHSVREVLAVVGAGHLAGMAKH 245
>gi|448495583|ref|ZP_21610042.1| TraB determinant protein [Halorubrum californiensis DSM 19288]
gi|445688109|gb|ELZ40381.1| TraB determinant protein [Halorubrum californiensis DSM 19288]
Length = 593
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 17/148 (11%)
Query: 138 AEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPT 194
+EGG V +VGTAHVS+ S EVE I+ +P VV +EL R L TP +L
Sbjct: 38 SEGG---VTVVGTAHVSESSVDEVEETIERERPDVVAVELDEGRYRQLNGETPDDLDA-- 92
Query: 195 VGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGD 250
G+++ + + F L W L+ V + L +I PG++ + A + A +G V L D
Sbjct: 93 -GDLL----RGNTVFQFLAYWMLSYVQTQLGERFDIEPGADMKAAVDVAESFGIDVALVD 147
Query: 251 RPVQITLRRTWEKMPLWHKIKLLYSFLF 278
R +Q T++R W +M + K++L+ F
Sbjct: 148 RDIQTTIQRFWARMTVTEKLRLVGGLAF 175
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQG 353
++ D D++T++++E + P E L+ ERD +++ L+ + VVAVVG GH G
Sbjct: 322 ADLTDTDVVTMMMEEFRQFSPGGAEALIDERDAFIAHRLVALREAGHDVVAVVGAGHQAG 381
Query: 354 IKNYWKQP 361
I+ Y P
Sbjct: 382 IEGYLADP 389
>gi|161170222|gb|ABX59193.1| putative PrgY pheromone shutdown protein [uncultured marine group
II euryarchaeote EF100_57A08]
Length = 385
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 110/219 (50%), Gaps = 13/219 (5%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWKKK 205
+VGTAHVS S V A I P +V +ELC SR+ S+ P +L + ++++ +
Sbjct: 14 IVGTAHVSSASVALVNAQIKEFDPDLVAVELCESRLRSLKKPDDLDNDDLLKIIN---EG 70
Query: 206 HNTFGILYSWFLA---KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
++ +L S A ++ PG+E A E A + + L DR V ITLRR W
Sbjct: 71 RSSMILLQSALAAQQRRMGLETGEKPGAELLAAIEAAEEANIEHALIDRDVVITLRRAWR 130
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
KM + K ++L + L++ D D+LT +++E A P E L+
Sbjct: 131 KMGMREKWRVLNALLWEDEDEDFDLDELLEDS-----DLLTTLMEEARDAAPRAGEVLID 185
Query: 323 ERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP 361
ERD Y++ + +V + V+A+VG GH+ GI + ++P
Sbjct: 186 ERDAYLAGRIQQVRGK-GKVLAIVGAGHINGIIEHLEKP 223
>gi|383624993|ref|ZP_09949399.1| TraB determinant protein [Halobiforma lacisalsi AJ5]
gi|448697449|ref|ZP_21698489.1| TraB determinant protein [Halobiforma lacisalsi AJ5]
gi|445781402|gb|EMA32258.1| TraB determinant protein [Halobiforma lacisalsi AJ5]
Length = 597
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 24/173 (13%)
Query: 108 NGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDF 167
G V VPE + PE P GT V ++GTAHVS+ S EV +D
Sbjct: 4 GGGVDVPEPPDR--PESEP--------GGDGNRGTGSVDVLGTAHVSQASVDEVHETVDR 53
Query: 168 LKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHL 224
+P VV +EL R + TP +L+ + + F L W L+ V S L
Sbjct: 54 DQPDVVAVELDEGRYRQMQGGTPDDLEAEDL-------LSGNTVFQFLAYWMLSYVQSRL 106
Query: 225 ----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLL 273
++ PG++ + A E A + G V L DR +Q+T++R W ++ K+K++
Sbjct: 107 GDQFDVEPGADMQAAIEAAERNGSGVALVDRDIQVTIQRFWRRLSFTEKLKMI 159
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
M D D++ +++E + P L+ ERD Y++ L ++ + V+AVVG GH GI+
Sbjct: 332 MTDGDVVGAMMEEFRQFSPRGANALIDERDAYIAHNLHQLRQQGYEVLAVVGAGHRAGIE 391
Query: 356 NYWKQP 361
Y P
Sbjct: 392 RYLANP 397
>gi|448538306|ref|ZP_21622812.1| TraB determinant protein [Halorubrum hochstenium ATCC 700873]
gi|445701388|gb|ELZ53370.1| TraB determinant protein [Halorubrum hochstenium ATCC 700873]
Length = 592
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 14/141 (9%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDM 201
V +VGTAHVS+ S EVE I+ +P VV +EL R L TP +L G+++
Sbjct: 41 VTVVGTAHVSERSVDEVEETIERERPDVVAVELDEGRYRQLNGETPDDLD---AGDLL-- 95
Query: 202 WKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
K + F L W L+ V + L +I PG++ + A + A G V L DR +Q T+
Sbjct: 96 --KGNTVFQFLAYWMLSYVQTQLGERFDIEPGADMKAAVDVAESLGIDVALVDRDIQTTI 153
Query: 258 RRTWEKMPLWHKIKLLYSFLF 278
+R W +M L K++L+ F
Sbjct: 154 QRFWARMTLTEKLRLVGGLAF 174
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQG 353
++ D D++T++++E + P E L+ ERD +++ L+ + VVAVVG GH G
Sbjct: 321 ADLTDTDVVTMMMEEFRQFSPGGAEALIDERDAFIAHRLVALREAGHDVVAVVGAGHQSG 380
Query: 354 IKNYWKQPV---PVHDLMTIPSPK 374
I+ Y P P+ DL+ S +
Sbjct: 381 IERYLADPATLPPMSDLVGEESGR 404
>gi|22327748|ref|NP_200016.2| TraB family protein [Arabidopsis thaliana]
gi|332008778|gb|AED96161.1| TraB family protein [Arabidopsis thaliana]
Length = 258
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 98/193 (50%), Gaps = 17/193 (8%)
Query: 177 LCSSRVSMLTPQNLK-----------VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLE 225
+ +S V QNLK + VG +D+ + +L + F +K++S +
Sbjct: 1 MYTSSVGGEVDQNLKSGELSLTGTGFLGAVGRSLDLGGQTALALRLLLAVFSSKLSSVAD 60
Query: 226 IFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSF--LFQAFFL 283
G EFR A + + + G +++LGDRP++ITL+R W + K L+ + + +
Sbjct: 61 RPFGDEFRAARKASEEVGAQLVLGDRPIEITLQRAWNSLKWGEKFNLVMAVTRVITSSSG 120
Query: 284 PSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL--LKVATEHSS 341
SA +L +E D+ + + +S ++P L+ L+HERD Y++ +L K +
Sbjct: 121 ISAAELKE--QETDENSGSLQLYERLSFSYPALLMPLIHERDTYLAWSLKRSKAVNGCKT 178
Query: 342 VVAVVGKGHLQGI 354
VV V+GKGH+ G+
Sbjct: 179 VVGVIGKGHMNGV 191
>gi|448501542|ref|ZP_21612244.1| TraB determinant protein [Halorubrum coriense DSM 10284]
gi|445694973|gb|ELZ47086.1| TraB determinant protein [Halorubrum coriense DSM 10284]
Length = 590
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 87/185 (47%), Gaps = 24/185 (12%)
Query: 101 SSDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCRE 160
S RDE + + P T + PR A G V +VGTAHVS+ S E
Sbjct: 5 SRGRDEASPSTDGPSRTDGGDLDREPR----------AAAGEGSVTVVGTAHVSERSVDE 54
Query: 161 VEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDMWKKKHNTFGILYSWFL 217
VE I+ +P VV +EL R + TP +L G+++ + + F L W L
Sbjct: 55 VEETIERERPDVVAVELDEGRYRQMNGETPDDLDA---GDLL----RGNTVFQFLAYWML 107
Query: 218 AKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLL 273
+ V + L +I PG++ + A + A G V L DR +Q T++R W +M + K++L+
Sbjct: 108 SYVQTQLGERFDIEPGADMKAAVDLAESLGIDVALVDRDIQTTIQRFWARMTVTEKLRLV 167
Query: 274 YSFLF 278
F
Sbjct: 168 GGLAF 172
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQG 353
++ D D+++++++E + P E L+ ERD +++ L+ + VVAVVG GH G
Sbjct: 319 ADLTDTDVVSMMMEEFRQFSPGGAEALIDERDAFIAHRLVALREAGHDVVAVVGAGHRAG 378
Query: 354 IKNYWKQP 361
I+ Y +P
Sbjct: 379 IEGYLARP 386
>gi|448432356|ref|ZP_21585492.1| TraB determinant protein [Halorubrum tebenquichense DSM 14210]
gi|445687240|gb|ELZ39532.1| TraB determinant protein [Halorubrum tebenquichense DSM 14210]
Length = 591
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V +VGTAHVS+ S +VE I+ +P VV +EL R L TP +L G+
Sbjct: 36 GGGSVTVVGTAHVSERSVDQVEETIERERPDVVAVELDEGRYRQLNGETPDDLDA---GD 92
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
++ K + F L W L+ V + L +I PG++ + A + A G V L DR +
Sbjct: 93 LL----KGNTVFQFLAYWMLSYVQTQLGERFDIEPGADMKAAVDIAESLGIDVALVDRDI 148
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLF 278
Q T++R W +M L K++L+ F
Sbjct: 149 QTTIQRFWARMTLAEKLRLVGGLAF 173
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQG 353
++ D D++T++++E + P E L+ ERD +++ L+ + VVAVVG GH G
Sbjct: 320 ADLTDTDVVTMMMEEFRQFSPGGAEALIDERDAFIAHRLVALREAGHDVVAVVGAGHQAG 379
Query: 354 IKNYWKQP 361
I+ Y P
Sbjct: 380 IEGYLANP 387
>gi|424814208|ref|ZP_18239386.1| pheromone shutdown-related protein TraB [Candidatus Nanosalina sp.
J07AB43]
gi|339757824|gb|EGQ43081.1| pheromone shutdown-related protein TraB [Candidatus Nanosalina sp.
J07AB43]
Length = 380
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 17/194 (8%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWK 203
+ +VGTAHVS+ES EV I+ P VF+EL +R S+ + + + E + K
Sbjct: 12 ITIVGTAHVSEESKEEVREKIESESPDRVFVELDENRYRSLSSDSGWEEMNLVEAIRQGK 71
Query: 204 KKHNTFGILYSWFLAKVASHLEIFPGSEF----RVAFEEAMKYGGKVILGDRPVQITLRR 259
+ S + ++ + PG E +V+ E ++Y L DR + T R
Sbjct: 72 GFTLFLKLFLSIYQRRMGLEQGVEPGEELLEAVKVSEENNIEYS----LVDRDINETFSR 127
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
EK+ W K+KLL S F S D+ + +E DML+ V++E+ FP++ +T
Sbjct: 128 ALEKLTFWEKVKLLSSIGFS----ESELDVENLKQE----DMLSQVVKELEDEFPSIKKT 179
Query: 320 LVHERDQYMSSTLL 333
+ ER+++M+ +L
Sbjct: 180 FLDERNEFMAEKIL 193
>gi|345004737|ref|YP_004807590.1| TraB determinant protein [halophilic archaeon DL31]
gi|344320363|gb|AEN05217.1| TraB determinant protein [halophilic archaeon DL31]
Length = 555
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 8/138 (5%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V +VGTAHVS ES REVE I+ +P VV +EL R + + G+++ +
Sbjct: 8 VRVVGTAHVSAESVREVEETIEDERPDVVAVELDEGRHRQMRGEEPDDLDAGDLL----Q 63
Query: 205 KHNTFGILYSWFL----AKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ F W L A++ +I PG+E A E A ++G V L DR +Q T+RR
Sbjct: 64 GNTVFQFFAYWMLSYVQARMGDKFDIQPGAELLAAVETAEEFGIPVALVDRDIQETIRRF 123
Query: 261 WEKMPLWHKIKLLYSFLF 278
W++M + K++++ S F
Sbjct: 124 WKRMTFFEKLRVVGSLAF 141
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
+ D D++T +++E + P E L+ ERD +++ LL + + VVA+VG GH GI+
Sbjct: 290 LTDTDVVTAMMEEFREFSPGGAEALIDERDAFIAHNLLDLREQGKRVVAIVGAGHQAGIE 349
Query: 356 NYWKQP 361
+Y P
Sbjct: 350 SYLANP 355
>gi|399574456|ref|ZP_10768215.1| TraB family protein [Halogranum salarium B-1]
gi|399240288|gb|EJN61213.1| TraB family protein [Halogranum salarium B-1]
Length = 538
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 14/139 (10%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDMWK 203
+VGTAHVS +S REVE I+ +P VV +EL R + TP +L G+++
Sbjct: 1 MVGTAHVSADSVREVEETIEAERPDVVAVELDEGRYRQMQGETPDDLDA---GDLL---- 53
Query: 204 KKHNTFGILYSWFL----AKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
+ + F + W L A++ +I PG++ A E A +YG V L DR +Q T++R
Sbjct: 54 RGNTVFQFIAYWMLSYVQAQMGEKFDIQPGADMLAAVETAEEYGLDVALVDRDIQTTIQR 113
Query: 260 TWEKMPLWHKIKLLYSFLF 278
W +M K++++ F
Sbjct: 114 FWRRMSFVEKLRMVGGLAF 132
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 277 LFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKV 335
LF L ED + + E+ D D++T++++E + P E L+ ERD Y++ L+ +
Sbjct: 253 LFAVMGLNVDEDYEELDMSELTDKDVVTVMMEEFREFSPGGAEALIDERDAYIAHKLVAL 312
Query: 336 ATEHSSVVAVVGKGHLQGIKNYWKQP 361
+ V+AVVG GH GI+ Y P
Sbjct: 313 RAQGHDVLAVVGAGHRAGIERYLANP 338
>gi|449485634|ref|XP_004157230.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101219560
[Cucumis sativus]
Length = 823
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 18/151 (11%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
++LVGT+H+S +S ++VE ++ +KP V +ELC SR ++ + P +M+
Sbjct: 114 IWLVGTSHISPKSVKDVERVVRAVKPDNVVVELCRSRAGIMYTLDTGEPDQKLKSNMFSL 173
Query: 205 KHNTF--GILYSW----------------FLAKVASHLEIFPGSEFRVAFEEAMKYGGKV 246
+ F ++ S F +K++S + G EFR A + + + G ++
Sbjct: 174 SGDGFLGAVVRSINLGGQTALALRLLLAVFSSKISSDVNRPFGDEFRAARKASEEVGAQI 233
Query: 247 ILGDRPVQITLRRTWEKMPLWHKIKLLYSFL 277
+LGDRP++ITL R W + K+ L+ S +
Sbjct: 234 VLGDRPIEITLERAWNALIWTEKLSLVSSVI 264
>gi|313126418|ref|YP_004036688.1| hypothetical protein Hbor_16750 [Halogeometricum borinquense DSM
11551]
gi|448286262|ref|ZP_21477496.1| hypothetical protein C499_05820 [Halogeometricum borinquense DSM
11551]
gi|312292783|gb|ADQ67243.1| uncharacterized PrgY-like protein, pheromone shutdown like protein
[Halogeometricum borinquense DSM 11551]
gi|445575095|gb|ELY29577.1| hypothetical protein C499_05820 [Halogeometricum borinquense DSM
11551]
Length = 555
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Query: 132 LTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLK 191
++ ++T EG V +VGTAHVS++S REVE ++ +P VV +EL R +
Sbjct: 1 MSKEATGEG---RVRVVGTAHVSEDSVREVEDVVAEERPDVVAVELDEGRYRQMKGGAPD 57
Query: 192 VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVI 247
G+++ + + F + W L+ V + L ++ PG++ A E A K+G V
Sbjct: 58 DIEPGDLL----RGNTVFQFIAYWMLSYVQAQLGEKFDVEPGADMLAAVETAEKFGIDVA 113
Query: 248 LGDRPVQITLRRTWEKMPLWHKIKLLYSFLF 278
L DR + T+RR W +M L K+K++ F
Sbjct: 114 LVDRDINETMRRFWSQMSLIEKLKMVGGLAF 144
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
+ M D D+++ +++E + P + L+ ERD Y++ L+ + VVAVVG GH +
Sbjct: 289 IDSMTDTDVVSAMMEEFREFSPGGAQALIDERDAYIAHRLVALRQSGHHVVAVVGAGHRE 348
Query: 353 GIKNYWKQPV---PVHDLMTIPS 372
GI+ Y K P P+ L PS
Sbjct: 349 GIERYLKYPERLPPMDSLTGTPS 371
>gi|332265027|ref|XP_003281531.1| PREDICTED: LOW QUALITY PROTEIN: traB domain-containing protein
[Nomascus leucogenys]
Length = 342
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 183 SMLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASH----LEIFPGSEFRVAFEE 238
S LT Q L E + +++ L L KV++H L + PG EFR AF+E
Sbjct: 84 SFLTTQELTQELSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKE 143
Query: 239 AMKYG-GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMD 297
A K K LGDRP+ +T +R + W K++L + F + + S +D+ R ++
Sbjct: 144 ASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVRLAWGCAFLSDPI-SKDDVERCKQK-- 200
Query: 298 DVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE---------------HSSV 342
D+L ++ EM FP L T+V ERD Y++ L + A S V
Sbjct: 201 --DLLEQMMAEMIGEFPDLHRTIVSERDVYLTYMLRQAARRLELPRASDAEPRKCIPSVV 258
Query: 343 VAVVGKGHLQGIKNYWKQPVPVHDLMTIPSP 373
V VVG GH+ GI+ W + + ++MT+P P
Sbjct: 259 VGVVGMGHVPGIEKNWSTDLNIQEIMTVPPP 289
>gi|325915988|ref|ZP_08178281.1| pheromone shutdown-related protein TraB [Xanthomonas vesicatoria
ATCC 35937]
gi|325537798|gb|EGD09501.1| pheromone shutdown-related protein TraB [Xanthomonas vesicatoria
ATCC 35937]
Length = 410
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 119/255 (46%), Gaps = 9/255 (3%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S V+ I + V +EL + R+ L+ P L + +++ +
Sbjct: 34 LLGTAHVSLASVAAVQRAIGSGRYDAVAVELDTQRLQALSDPDALARLDLVQVIRKGRVA 93
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A G V L DR V +T +R ++
Sbjct: 94 LFAANLALAAYQRRLAKQLGIEPGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLG 153
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL L F + ++++ DML + + P L ET++ ERD
Sbjct: 154 FFGKMKLAGGLLGGLFAADEVGE--EEIEKLKQGDMLEASFGDFASESPELYETVIAERD 211
Query: 326 QYMSSTLLKVAT-EHSSVVAVVGKGHLQGIKNYWKQ----PVPVHDLMTIPSPKPAVSAL 380
+YM++ L + A V+AVVG GHL G+ + +Q P P+ + + + V +
Sbjct: 212 RYMATRLREEANGGQREVLAVVGAGHLAGLARHLEQDTEAPGPLRESLEYVHQRKRVPWI 271
Query: 381 KVLSSLGVAVAGVAI 395
L L V + G+ I
Sbjct: 272 -TLGILAVIITGIGI 285
>gi|448456209|ref|ZP_21595022.1| TraB determinant protein [Halorubrum lipolyticum DSM 21995]
gi|445812708|gb|EMA62698.1| TraB determinant protein [Halorubrum lipolyticum DSM 21995]
Length = 603
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 142 TCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDM 201
+ V +VGTAHVS+ S EVE I+ +P VV +EL R + ++ G+++
Sbjct: 50 SGSVTVVGTAHVSERSVDEVEETIERERPDVVAVELDEGRYRQMNGESPDDLDAGDLL-- 107
Query: 202 WKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ + F L W L+ V + L +I PG++ R A + A G V L DR +Q T+
Sbjct: 108 --RGNTVFQFLAYWMLSYVQTQLGDRFDIEPGADMRAAIDVAEGLGIDVALVDRDIQTTI 165
Query: 258 RRTWEKMPLWHKIKLLYSFLF 278
+R W +M + K++++ F
Sbjct: 166 QRFWARMSVTEKLRMVGGLAF 186
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
++++ D D++T++++E + P E L+ ERD +++ L+ + VVAVVG GH
Sbjct: 332 MEDLTDTDVVTMMMEEFRQFSPGGAEALIDERDAFIAHRLVALREAGHDVVAVVGAGHRA 391
Query: 353 GIKNYWKQP 361
GI+ Y P
Sbjct: 392 GIEGYLADP 400
>gi|448301449|ref|ZP_21491442.1| TraB determinant protein [Natronorubrum tibetense GA33]
gi|445584185|gb|ELY38509.1| TraB determinant protein [Natronorubrum tibetense GA33]
Length = 589
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDM 201
V+++GTAHVS+ S EV ID +P VV +EL R + + TP +++ +
Sbjct: 23 VHVLGTAHVSQASVDEVHETIDREQPDVVAVELDEDRYNQMQGGTPDDIEAKDL------ 76
Query: 202 WKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ F L W L+ V S L +I PG++ R A E A + G V L DR +Q+T+
Sbjct: 77 -LSGNTVFQFLAYWMLSYVQSRLGEKFDIEPGADMRAAIEAAERNGSGVALVDRDIQVTI 135
Query: 258 RRTWEKMPLWHKIKLL 273
+R W ++ K+K++
Sbjct: 136 QRFWSRLSFTEKMKMI 151
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
M D D++ +++E + P L+ ERD Y+++ L ++ T+ VVAVVG GH GI+
Sbjct: 324 MTDGDVVRAMMEEFRQFSPRGANALIDERDAYIANHLHQLRTQGYDVVAVVGAGHKAGIE 383
Query: 356 NYWKQPVPV 364
+ P +
Sbjct: 384 RHLANPTEI 392
>gi|448446138|ref|ZP_21590624.1| TraB determinant protein [Halorubrum saccharovorum DSM 1137]
gi|445684330|gb|ELZ36708.1| TraB determinant protein [Halorubrum saccharovorum DSM 1137]
Length = 596
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 107 TNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIID 166
++GA P P + + + + I + ++ V +VGTAHVS++S EVE I+
Sbjct: 8 SDGASPPPTASDPAVTDGSEDAAEIGASEPSSGDEPGSVTVVGTAHVSEQSVDEVEETIE 67
Query: 167 FLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASH 223
+P VV +EL R + +P +L + + + F L W L+ V +
Sbjct: 68 RERPDVVAVELDEGRYRQMNGESPDDLDASDL-------LRGNTVFQFLAYWMLSYVQTQ 120
Query: 224 L----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLF 278
L +I PG++ R A + A G V L DR +Q T++R W +M + K++++ F
Sbjct: 121 LGDRFDIEPGADMRAAIDVAEGLGIDVALVDRDIQTTIQRFWARMSITEKLRMVGGLAF 179
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
++++ D D++T++++E + P E L+ ERD +++ L+ + VVAVVG GH
Sbjct: 325 MEDLTDTDVVTMMMEEFRQFSPGGAEALIDERDAFIAHRLVALREAGHDVVAVVGAGHRA 384
Query: 353 GIKNYWKQPV---PVHDLM 368
GI+ Y P P+ DL+
Sbjct: 385 GIEGYLANPASLPPMEDLV 403
>gi|448609033|ref|ZP_21660312.1| plasmid transfer protein [Haloferax mucosum ATCC BAA-1512]
gi|445747410|gb|ELZ98866.1| plasmid transfer protein [Haloferax mucosum ATCC BAA-1512]
Length = 559
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V +VGTAHVS +S REVE I+ +P VV +EL R L +P++++ +
Sbjct: 7 GEGHVRVVGTAHVSADSVREVEETIEAEQPDVVAVELDEGRYRQLKGGSPEDIEASDL-- 64
Query: 198 MVDMWKKKHNTFGILYSWFL----AKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F + W L A++ ++ PG++ A E A +G V L DR +
Sbjct: 65 -----LRGNTVFQFIAYWMLSYVQAQMGEKFDVQPGADMLAAVETAESHGIDVALVDRNI 119
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLF 278
Q T++R W +M L K+++ LF
Sbjct: 120 QTTIQRFWRRMGLVEKMQMAGELLF 144
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 280 AFFLPSAEDLNRMLKEMDDV---DMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA 336
F P+AED + EM D+ D+++ +++E + P E L+ ERD Y++ L+ +
Sbjct: 275 GLFAPTAEDQDYEEYEMADLTDGDVVSAMMEEFRRFSPGGAEALIDERDAYIAHKLIALR 334
Query: 337 TEHSSVVAVVGKGHLQGIKNYWKQP 361
+ VVAVVG GH GI+NY +QP
Sbjct: 335 QSGADVVAVVGAGHKAGIENYLQQP 359
>gi|2388570|gb|AAB71451.1| YUP8H12.12 [Arabidopsis thaliana]
Length = 146
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 62/105 (59%), Gaps = 25/105 (23%)
Query: 76 SGEEFVHVD--------PLSESIVSLGDEVRDESSDRDETNGAVPV-------------- 113
SGE+FVH+D LS+SIV++ + + + +E G+ V
Sbjct: 17 SGEDFVHIDDPRPTGDISLSDSIVNVEKDELLDEAAEEEFRGSDSVFSGGDGGGADDDGG 76
Query: 114 ---PEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSK 155
E TK LPEEL +SVVILTC+STA+GG+CDVYLVGTAHVSK
Sbjct: 77 ECSSEATKVELPEELAKSVVILTCESTADGGSCDVYLVGTAHVSK 121
>gi|218778073|ref|YP_002429391.1| TraB family protein [Desulfatibacillum alkenivorans AK-01]
gi|218759457|gb|ACL01923.1| TraB family protein [Desulfatibacillum alkenivorans AK-01]
Length = 402
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 13/233 (5%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMW 202
++ ++GTAHVSK S V +I KP V +ELC SR+ + P K + ++
Sbjct: 28 EIVILGTAHVSKASADLVARVIQREKPDTVCVELCPSRLEAINNPDRWKEMDIVSVIKEK 87
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
+ +L S F K+A LEI G E A +EA V DR ++ TL R W
Sbjct: 88 RAYMLLSHLLLSSFQKKIADKLEIQAGQEMMTAIQEAAAIEASVHPIDRDIRTTLARCWR 147
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKE----MDDVDMLTLVIQEMSKAFPTLME 318
M L K LL + + ++ +++ +E + D D L +V++E+ + P +
Sbjct: 148 LMGLKAKFSLLLD------VMGAMDEADKITEEDVEALKDKDALEMVLEELGEMLPQVRT 201
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
L+ ERD YM T+ + V G + GIK ++ + + + +L ++P
Sbjct: 202 VLIDERDLYMVHTINHAPGDKVVAVVGAGH--VPGIKKHFDEQIDIEELESLP 252
>gi|448356082|ref|ZP_21544830.1| TraB determinant protein [Natrialba hulunbeirensis JCM 10989]
gi|445634179|gb|ELY87364.1| TraB determinant protein [Natrialba hulunbeirensis JCM 10989]
Length = 601
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 14/136 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDM 201
V+++GTAHVS+ S +V +D +P VV +EL R + TP +++ +
Sbjct: 33 VHVLGTAHVSQASVDDVHETVDREQPDVVAVELDEGRYRQMQGGTPDDIEAKDL------ 86
Query: 202 WKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ F L W L+ V S L +I PG++ R A E A + G V L DR +QIT+
Sbjct: 87 -LSGNTVFQFLAYWMLSYVQSRLGDQFDIEPGADMRAAIEAAERNGSGVSLVDRDIQITI 145
Query: 258 RRTWEKMPLWHKIKLL 273
+R W ++ K+K++
Sbjct: 146 QRFWSRLSFSEKLKMV 161
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
M D D++ +++E + P L+ ERD Y++ L ++ VVAVVG GH GI+
Sbjct: 335 MTDGDVVAAMMEEFRRFSPRGANALIDERDAYIAHNLHELRKHGYDVVAVVGAGHKAGIE 394
Query: 356 NYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
Y + P +P + +T + S LKV L
Sbjct: 395 RYLENPSELPQMESLTGTASSRRFSPLKVFGYL 427
>gi|448591118|ref|ZP_21650883.1| plasmid transfer protein [Haloferax elongans ATCC BAA-1513]
gi|445734614|gb|ELZ86173.1| plasmid transfer protein [Haloferax elongans ATCC BAA-1513]
Length = 556
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V++VGTAHVS +S REVE I+ +P VV +EL R L TP +++ +
Sbjct: 7 GEGHVHVVGTAHVSADSVREVEETIEAEQPDVVAVELDEGRYRQLKGGTPDDIEARDL-- 64
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F + W L+ V S + ++ PG++ A E A G V L DR +
Sbjct: 65 -----LRGNTVFQFIAYWMLSYVQSRMGEKFDVKPGADMLAAVETAEDEGIDVALVDRDI 119
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLF 278
Q T++R W +M L K+++ F
Sbjct: 120 QTTIQRFWRRMGLVEKMRMAGDLAF 144
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 280 AFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE 338
F P AED+ ++E+ D D+++ +++E + P E L+ ERD +++ L+ +
Sbjct: 275 GLFAP-AEDVEEFDMEELTDGDVVSAMMEEFRRFSPGGAEALIDERDAFIAHQLVALRQS 333
Query: 339 HSSVVAVVGKGHLQGIKNYWKQP 361
VVA+VG GH GI+ Y + P
Sbjct: 334 GHHVVAIVGAGHKAGIEGYLRDP 356
>gi|448576096|ref|ZP_21642139.1| plasmid transfer protein [Haloferax larsenii JCM 13917]
gi|445729776|gb|ELZ81370.1| plasmid transfer protein [Haloferax larsenii JCM 13917]
Length = 556
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V++VGTAHVS +S REVE I+ +P VV +EL R L TP +++ +
Sbjct: 7 GEGHVHVVGTAHVSADSVREVEETIEAEQPDVVAVELDEGRYRQLKGGTPDDIEARDL-- 64
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F + W L+ V S + ++ PG++ A E A G V L DR +
Sbjct: 65 -----LRGNTVFQFIAYWMLSYVQSRMGDKFDVKPGADMLAAVETAEDEGIDVALVDRDI 119
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLF 278
Q T++R W +M L K+++ F
Sbjct: 120 QTTIQRFWRRMGLVEKMRMAGDLAF 144
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 280 AFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE 338
F P AED+ ++E+ D D+++ +++E + P E L+ ERD +++ L+ +
Sbjct: 275 GLFAP-AEDVEEFDMEELTDGDVVSAMMEEFRRFSPGGAEALIDERDAFIAHQLVALRQS 333
Query: 339 HSSVVAVVGKGHLQGIKNYWKQP 361
VVA+VG GH GI+ Y + P
Sbjct: 334 GHHVVAIVGAGHKAGIEGYLRDP 356
>gi|257417634|ref|ZP_05594628.1| TraB family protein [Enterococcus faecalis ARO1/DG]
gi|257159462|gb|EEU89422.1| TraB family protein [Enterococcus faecalis ARO1/DG]
Length = 280
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 235 AFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
A E A G + L DR +Q+T +R W + K KL+ +F F F E L L
Sbjct: 3 ALESAEDVGADIQLIDRDIQVTFKRMWRHLSFTQKPKLIMTF-FSEFEDVETERLEDFL- 60
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGI 354
E D D V ++SK FPT+ ++ ERD+ M + L +++ V VVGK H+ GI
Sbjct: 61 ESDSFDN---VFIQLSKKFPTIYNDMITERDKVMVTNLQN--SKYDVNVVVVGKAHINGI 115
Query: 355 KNYWKQ--PVPVHDLMTIPSPKPAVSALKVLSSLGVA-VAGVAIISGIYI 401
K K+ + +L +IPS K + ++++ L + + V+ SG+ +
Sbjct: 116 KAKLKEEKSYDISELTSIPSKKLSSKLIELIFPLTIILLLAVSFFSGVQV 165
>gi|448310454|ref|ZP_21500289.1| TraB determinant protein [Natronolimnobius innermongolicus JCM
12255]
gi|445608040|gb|ELY61909.1| TraB determinant protein [Natronolimnobius innermongolicus JCM
12255]
Length = 588
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V+++GTAHVS+ S EV ID +P VV +EL +R + P E D+
Sbjct: 23 VHVLGTAHVSQASVDEVHETIDREQPDVVAVELDENRYRQMQG---GAPDDIEAKDL-LS 78
Query: 205 KHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ F L W L+ V S L +I PG++ R A E A + G V L DR +QIT++R
Sbjct: 79 GNTVFQFLAYWMLSYVQSRLGERFDIEPGADMRAAIEAAERNGSGVALVDRDIQITIQRF 138
Query: 261 WEKMPLWHKIKLL 273
W ++ K+K++
Sbjct: 139 WSRLSFTEKLKMV 151
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 13/121 (10%)
Query: 280 AFFLPSA----EDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLK 334
FL +A ED++ + ++EM D D++ +++E + P L+ ERD Y+++ L +
Sbjct: 303 GLFLTTASGDVEDIDEVDIEEMTDGDVVAAMMEEFRQFSPRGANALIDERDAYIANHLHQ 362
Query: 335 VATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP--------SPKPAVSALKVLSSL 386
+ + V+AVVG GH GI+ + + P + L +I SP V L +++ L
Sbjct: 363 LRMQGYDVLAVVGAGHKAGIERHLENPAEIPSLESISGTASKRRFSPVKIVGYLVMIAFL 422
Query: 387 G 387
G
Sbjct: 423 G 423
>gi|448473337|ref|ZP_21601479.1| TraB determinant protein [Halorubrum aidingense JCM 13560]
gi|445818849|gb|EMA68698.1| TraB determinant protein [Halorubrum aidingense JCM 13560]
Length = 612
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 14/141 (9%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDM 201
V +VGTAH+S+ S EVE I+ +P VV +EL R + TP +L G+++
Sbjct: 63 VTVVGTAHISEHSVDEVEETIERERPDVVAVELDEGRYRQMQGETPDDLDA---GDLL-- 117
Query: 202 WKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
K + F L W L+ V + L +I PG++ + A + A G V L DR +Q T+
Sbjct: 118 --KGNTVFQFLAYWMLSYVQTQLGDRFDIEPGADMKAAIDVAEGLGIDVALVDRDIQTTI 175
Query: 258 RRTWEKMPLWHKIKLLYSFLF 278
+R W +M + K++++ F
Sbjct: 176 QRFWARMSITEKLRMVGGLAF 196
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
++E+ D D++T++++E + P E L+ ERD +++ L+ + VVAVVG GH
Sbjct: 341 MEELTDTDVVTMMMEEFRQFSPGGAEALIDERDAFIAHRLVALRDAGHDVVAVVGAGHRA 400
Query: 353 GIKNYWKQP 361
GI+ Y P
Sbjct: 401 GIEGYLANP 409
>gi|448733666|ref|ZP_21715908.1| hypothetical protein C450_10358 [Halococcus salifodinae DSM 8989]
gi|445802186|gb|EMA52493.1| hypothetical protein C450_10358 [Halococcus salifodinae DSM 8989]
Length = 505
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 137 TAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVG 196
A G V +VGTAHVS +S EVE I +P +V +EL R + + G
Sbjct: 17 AAGAGPGSVRVVGTAHVSADSVDEVERTIADERPDIVAVELDEGRYRQMKGEEPDDLDAG 76
Query: 197 EMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRP 252
+++ + + F L W L+ V + L +I PG++ A E A G + L DR
Sbjct: 77 DLL----RGNTVFQFLAYWLLSYVQTRLGDEFDIKPGADMLAAIETAEDLGLGIALVDRD 132
Query: 253 VQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLN 290
+QIT++R W +M K+++L S L AF PSA L
Sbjct: 133 IQITVQRFWTRMTGIEKLRMLSS-LPLAFAPPSAVALG 169
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
++++ D D++ +++E P E L+ ERD +++ L+++ VVAVVG GH
Sbjct: 241 MEDLTDADVVGAMLEEFRAFSPGGAEALIDERDAFIAHRLVELREAGHRVVAVVGAGHQN 300
Query: 353 GIKNYWKQP 361
GI+ Y P
Sbjct: 301 GIERYLDDP 309
>gi|117209769|gb|ABK32771.1| TraB [Enterococcus faecalis]
Length = 238
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 10/171 (5%)
Query: 235 AFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLK 294
A E A G + L DR +Q+T +R W + K KL+ +F F F E L L
Sbjct: 9 ALESAEDVGADIQLIDRDIQVTFKRMWRHLSFTQKPKLIMTF-FSEFEDVETERLEDFL- 66
Query: 295 EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGI 354
E D D V ++SK FPT+ ++ ERD+ M + L +++ V VVGK H+ GI
Sbjct: 67 ESDSFDN---VFIQLSKKFPTIYNDMITERDKVMVTNLQN--SKYDVNVVVVGKAHINGI 121
Query: 355 KNYWKQ--PVPVHDLMTIPSPKPAVSALKVLSSLGVA-VAGVAIISGIYIN 402
K K+ + +L +IPS K + ++++ L + + V+ SG+ +
Sbjct: 122 KAKLKEEKSYDISELTSIPSKKLSSKLIELIFPLTIILLLAVSFFSGVQVG 172
>gi|448540838|ref|ZP_21623759.1| TraB family protein [Haloferax sp. ATCC BAA-646]
gi|448549230|ref|ZP_21627919.1| TraB family protein [Haloferax sp. ATCC BAA-645]
gi|448555572|ref|ZP_21631612.1| TraB family protein [Haloferax sp. ATCC BAA-644]
gi|445708991|gb|ELZ60826.1| TraB family protein [Haloferax sp. ATCC BAA-646]
gi|445713293|gb|ELZ65071.1| TraB family protein [Haloferax sp. ATCC BAA-645]
gi|445718317|gb|ELZ70020.1| TraB family protein [Haloferax sp. ATCC BAA-644]
Length = 559
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V +VGTAHVS +S REVE + +P VV +EL R L TP +++ +
Sbjct: 7 GEGHVRVVGTAHVSADSVREVEETVREDRPDVVAVELDEGRYRQLKGGTPDDIEARDL-- 64
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F + W L+ V S + ++ PG++ A E A + G V L DR +
Sbjct: 65 -----LRGNTVFQFIAYWMLSYVQSRMGDKFDVKPGADMLAAVETAEEEGLDVALVDRDI 119
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLF 278
Q+T++R W++M K+++ LF
Sbjct: 120 QVTIQRFWQRMGTLEKMRMAGDLLF 144
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
+ E+ D D+++ +++E + P E L+ ERD Y++ L+ + VVAVVG GH +
Sbjct: 291 MAELTDGDVVSAMMEEFRRFSPGGAEALIDERDAYIAHQLVALRQSGRHVVAVVGAGHRE 350
Query: 353 GIKNYWKQP 361
GI+NY + P
Sbjct: 351 GIENYLEHP 359
>gi|433591648|ref|YP_007281144.1| putative PrgY-like protein, pheromone shutdown like protein
[Natrinema pellirubrum DSM 15624]
gi|448333969|ref|ZP_21523157.1| TraB determinant protein [Natrinema pellirubrum DSM 15624]
gi|433306428|gb|AGB32240.1| putative PrgY-like protein, pheromone shutdown like protein
[Natrinema pellirubrum DSM 15624]
gi|445621543|gb|ELY75018.1| TraB determinant protein [Natrinema pellirubrum DSM 15624]
Length = 589
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDM 201
V ++GTAHVS+ S EV I+ +P VV +EL R + + TP +++ +
Sbjct: 23 VQVLGTAHVSQASVDEVRDTIERERPDVVAVELDEGRYNQMQGGTPDDIEAEDL------ 76
Query: 202 WKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ F L W L+ V S L +I PG++ R A E A ++G V L DR +Q+T+
Sbjct: 77 -LSGNTVFQFLAYWMLSYVQSRLGDQFDIEPGADMRAAIEAAEEHGSGVALVDRDIQVTI 135
Query: 258 RRTWEKMPLWHKIKLL 273
+R W ++ K+K++
Sbjct: 136 QRFWSRLSFTEKLKMV 151
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
M D D++ +++E + P+ L+ ERD Y++S L + + V+AVVG GH GI+
Sbjct: 325 MTDGDVVAAMMEEFRQFSPSGANALIDERDAYIASHLNDLREQGYDVLAVVGAGHRAGIE 384
Query: 356 NYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
+ P +P + ++ + S LKVL L
Sbjct: 385 RHLANPAGIPSRESISGTASSRRFSPLKVLGYL 417
>gi|424811607|ref|ZP_18236858.1| pheromone shutdown-related protein TraB [Candidatus Nanosalinarum
sp. J07AB56]
gi|339757333|gb|EGQ40914.1| pheromone shutdown-related protein TraB [Candidatus Nanosalinarum
sp. J07AB56]
Length = 366
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
+V +VGT+HVS S EVE +D P +V +EL + R+ L + V E + K
Sbjct: 12 EVVIVGTSHVSGGSVEEVEETLDAENPDLVSVELDAERLEALRGGAWEDMDVAEAMKSGK 71
Query: 204 KKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
F +L + ++ PGSE A + A + ++L DRP+ T+ +
Sbjct: 72 GPMLAFQLLAQIYQRRLGDS---EPGSEMLAAVDHAEETETDLLLADRPLSETVAEL-KG 127
Query: 264 MPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHE 323
+ L K++ + L + E+ R+++E+D A P + L+ +
Sbjct: 128 LSLKEKLRGVRLLLSSSDEEVDVENAERLIEELD--------------AAPGVRRVLIDD 173
Query: 324 RDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP 361
R+Q M+ LL ++ VAVVG GH+ G+ + + P
Sbjct: 174 RNQEMARRLL--GSDFDRAVAVVGAGHVNGLVDELEDP 209
>gi|448382028|ref|ZP_21561863.1| TraB determinant protein [Haloterrigena thermotolerans DSM 11522]
gi|445662262|gb|ELZ15032.1| TraB determinant protein [Haloterrigena thermotolerans DSM 11522]
Length = 589
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDM 201
V ++GTAHVS+ S EV I+ +P VV +EL R + + TP +++ +
Sbjct: 23 VQVLGTAHVSQASVDEVRDTIERERPDVVAVELDEGRYNQMQGGTPDDVEAEDL------ 76
Query: 202 WKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ F L W L+ V S L +I PG++ R A E A ++G V L DR +Q+T+
Sbjct: 77 -LSGNTVFQFLAYWMLSYVQSRLGDQFDIEPGADMRAAIEAAEEHGSGVALVDRDIQVTI 135
Query: 258 RRTWEKMPLWHKIKLL 273
+R W ++ K+K++
Sbjct: 136 QRFWSRLTFTEKLKMV 151
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
M D D++ +++E + P+ L+ ERD Y++S L + + V+AVVG GH GI+
Sbjct: 325 MTDGDVVAAMMEEFRQFSPSGANALIDERDAYIASHLNDLREQGYDVLAVVGAGHRAGIE 384
Query: 356 NYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
+ P +P + ++ + S LKVL L
Sbjct: 385 RHLANPAEIPSRESISGTASSRRFSPLKVLGYL 417
>gi|284164903|ref|YP_003403182.1| TraB determinant protein [Haloterrigena turkmenica DSM 5511]
gi|284014558|gb|ADB60509.1| TraB determinant protein [Haloterrigena turkmenica DSM 5511]
Length = 589
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V ++GTAHVS+ S EV ID +P VV +EL +R + G+++
Sbjct: 23 VTVLGTAHVSQSSVDEVHETIDREQPDVVAVELDENRYRQMQGGAPDDIEAGDLL----S 78
Query: 205 KHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ F L W L+ V S L +I PG++ R A E A + G V L DR +Q+T++R
Sbjct: 79 GNTVFQFLAYWMLSYVQSRLGDQFDIEPGADMRAAIEAAERNGSGVALVDRDIQVTIQRF 138
Query: 261 WEKMPLWHKIKLL 273
W + + K+K++
Sbjct: 139 WRGLSITEKLKMV 151
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
++EM D D++ +++E + P L+ ERD Y+++ L ++ + V+AVVG GH
Sbjct: 321 IEEMTDGDVVAAMMEEFRQFSPRGANALIDERDAYIATHLHQLREQGYDVLAVVGAGHKA 380
Query: 353 GIKNYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
GI+ + + P +P + ++ + S LK++ L
Sbjct: 381 GIERHLENPSEIPSLESLSGTTSSSRFSPLKIVGYL 416
>gi|432329336|ref|YP_007247480.1| putative PrgY-like protein, pheromone shutdown like protein
[Aciduliprofundum sp. MAR08-339]
gi|432136045|gb|AGB05314.1| putative PrgY-like protein, pheromone shutdown like protein
[Aciduliprofundum sp. MAR08-339]
Length = 240
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 32/217 (14%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+ LVG AHV ++E II P +V +EL R L + T GEM ++K
Sbjct: 21 IILVGVAHVLDLRV-QIERIIMEENPDIVAVELDYGRYIALNSK-----TQGEMPYFYRK 74
Query: 205 KHNTFGILYSWFLAKVASHL-EIFP---GSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+A++ +L E+F G+E A A G +V D Q+ +R
Sbjct: 75 ------------MAEMQKNLAELFGNEVGTEMLTAVNTANVLGKRVEFIDMDSQMIVRAI 122
Query: 261 WEKMPLWHKIKLLYSFLFQAFF---LPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLM 317
+ M LW KI+L S +F F + AE + ++++E D I+E+ K +P L
Sbjct: 123 KKNMGLWEKIRLYGSLVFAPFIGKKVGRAE-VEKIIEEEDRY------IEEIRKKYPGLS 175
Query: 318 ETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGI 354
L ER+ YM+ L K+ + ++A VG GHL+G+
Sbjct: 176 RALFDEREAYMARNLEKLDADDLKILAFVGDGHLKGL 212
>gi|380512222|ref|ZP_09855629.1| trab family membrane protein [Xanthomonas sacchari NCPPB 4393]
Length = 430
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 23/232 (9%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S VE I + V +EL R+ LT P L + +++ +
Sbjct: 35 LLGTAHVSLASVAAVERAIGSGRFDAVAVELDPQRLQALTDPDALTKLDLVQVIRKGRVA 94
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A + V L DR V +T +R ++
Sbjct: 95 LFAANLALAAYQRRLAEQLGIEPGAELKRAVLLARERQLPVYLVDREVGLTFKRASSRLG 154
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
+ K+KL L F S E ++++ DML + + P L ET++ ERD
Sbjct: 155 FFGKLKLASGLLGGLF--ASDEVGEAEIEKLKQGDMLEASFGDFASESPALYETIIAERD 212
Query: 326 QYMSSTLLKVATEHSS--------------------VVAVVGKGHLQGIKNY 357
+YM++ L + + + V+AVVG GHL G+ +
Sbjct: 213 RYMATRLREERAQQRALPLTDNAEPLEGAPSTGVREVLAVVGAGHLAGLARH 264
>gi|456887002|gb|EMF98098.1| TraB family protein [Leptospira borgpetersenii str. 200701203]
Length = 286
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 234 VAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR-M 292
+A +E K G +++ DR + TL+R W + +++++ LL + L F ED++
Sbjct: 1 MAIDEGEKIGARIVPIDREISTTLKRAWWNIGIFNRMFLLSALLTSLFV---KEDVSEEK 57
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
++EM D+L + ++ K + ++ ++ ERD Y++ + + E + AVVG GHLQ
Sbjct: 58 IEEMKSEDVLKDLFSQLPKRYESIKNVIIDERDSYLAQKIRDASKEGKKIFAVVGAGHLQ 117
Query: 353 GIKNY-WKQ 360
GI N+ W++
Sbjct: 118 GIMNHVWEE 126
>gi|448468864|ref|ZP_21599961.1| TraB determinant protein [Halorubrum kocurii JCM 14978]
gi|445809974|gb|EMA60007.1| TraB determinant protein [Halorubrum kocurii JCM 14978]
Length = 597
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 14/144 (9%)
Query: 142 TCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEM 198
+ V +VGTAHVS+ S EVE I+ +P VV +EL R + +P +L +
Sbjct: 44 SGSVTVVGTAHVSERSVDEVEETIERERPDVVAVELDEGRYRQMNGESPDDLDASDL--- 100
Query: 199 VDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQ 254
+ + F L W L+ V + L +I PG++ R A + A G V L DR +Q
Sbjct: 101 ----LRGNTVFQFLAYWMLSYVQTQLGDRFDIEPGADMRAAIDVAEGLGIDVALVDRDIQ 156
Query: 255 ITLRRTWEKMPLWHKIKLLYSFLF 278
T++R W +M + K++++ F
Sbjct: 157 TTIQRFWARMSVTEKLRMVGGLAF 180
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
++++ D D++T++++E + P E L+ ERD +++ L+ + VVAVVG GH
Sbjct: 326 MEDLTDTDVVTMMMEEFRQFSPGGAEALIDERDAFIAHRLVALRESGYDVVAVVGAGHRA 385
Query: 353 GIKNYWKQP 361
GI+ Y P
Sbjct: 386 GIEGYLADP 394
>gi|448414658|ref|ZP_21577671.1| hypothetical protein C474_02780 [Halosarcina pallida JCM 14848]
gi|445681767|gb|ELZ34195.1| hypothetical protein C474_02780 [Halosarcina pallida JCM 14848]
Length = 559
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V +VGTAHVS++S REVE ++ +P VV +EL R + TP +++ P G+
Sbjct: 7 GEGRVRVVGTAHVSEDSVREVEEVVAAERPDVVAVELDEGRYRQMKGGTPDDIE-P--GD 63
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
++ + + F + W L+ V + L ++ PG++ A E A G V L DR +
Sbjct: 64 LL----RGNTVFQFIAYWMLSYVQAQLGEKFDVQPGADMLAAVEAAEGLGIDVALVDRDI 119
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLF 278
T+RR W +M K++++ F
Sbjct: 120 NETMRRFWARMSFLEKLRMVGGLAF 144
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
+ EM D D ++ +++E + P + L+ ERD Y++ L+ + VVAVVG GH
Sbjct: 289 MSEMTDTDAVSAMMEEFREFSPGGAQALIDERDAYIAHRLVGLRRTGRDVVAVVGAGHRA 348
Query: 353 GIKNYWKQP 361
GI+ Y P
Sbjct: 349 GIERYLANP 357
>gi|448627590|ref|ZP_21672056.1| plasmid transfer protein [Haloarcula vallismortis ATCC 29715]
gi|445758898|gb|EMA10194.1| plasmid transfer protein [Haloarcula vallismortis ATCC 29715]
Length = 510
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 14/143 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
GT V +VGTAHVS+ S EVE+ I+ KP +V +EL R + TP +L +
Sbjct: 17 GTGRVDVVGTAHVSEHSVTEVESAIEESKPDIVAVELDEGRYRQIKGETPDDLDASDL-- 74
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F L W L+ + + L +I PG++ + + A + G V L DR +
Sbjct: 75 -----LRGNTVFQFLAYWMLSYIQTRLGDRFDIEPGADMKAGIDTAERLGLGVALVDRDI 129
Query: 254 QITLRRTWEKMPLWHKIKLLYSF 276
Q T++R W ++ K+KL+ S
Sbjct: 130 QTTVQRFWARLTAVEKLKLVGSL 152
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
++ + D D+++ +++E + P E L+ ERD +++ L+ + V+AVVG GH +
Sbjct: 243 METLTDTDVVSAMMEEFRQFSPGGAEALIDERDAFIAHRLIALREAGYHVLAVVGAGHRE 302
Query: 353 GIKNYWKQP 361
GI+ Y P
Sbjct: 303 GIQGYLDNP 311
>gi|429193077|ref|YP_007178755.1| PrgY-like protein, pheromone shutdown like protein
[Natronobacterium gregoryi SP2]
gi|448326932|ref|ZP_21516275.1| TraB determinant protein [Natronobacterium gregoryi SP2]
gi|429137295|gb|AFZ74306.1| putative PrgY-like protein, pheromone shutdown like protein
[Natronobacterium gregoryi SP2]
gi|445609745|gb|ELY63536.1| TraB determinant protein [Natronobacterium gregoryi SP2]
Length = 590
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 16/145 (11%)
Query: 136 STAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKV 192
S + G+ DV +GTAHVS+ S EV +D +P VV +EL R + TP +L+
Sbjct: 18 SGGDSGSVDV--LGTAHVSQASVDEVHETVDEKRPDVVAVELDEGRYRQMQGGTPDDLEA 75
Query: 193 PTVGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVIL 248
+ + F L W L+ V S L ++ PG++ + A + A + G V L
Sbjct: 76 KDL-------LSGNTVFQFLAYWMLSYVQSRLGDQFDVEPGADMQAAIDAAERNGSGVAL 128
Query: 249 GDRPVQITLRRTWEKMPLWHKIKLL 273
DR +Q+T++R W ++ K+K++
Sbjct: 129 VDRDIQVTIQRFWSRLSFTEKLKMV 153
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
+ D D++ +++E + P L+ ERD Y++ L + + V+AVVG GH GI+
Sbjct: 325 LTDGDVVGAMMEEFRRFSPRGANALIDERDAYIAHKLHVLRQQGYDVLAVVGAGHRAGIE 384
Query: 356 NYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
Y + P +P + +T + S LK+ L
Sbjct: 385 RYLENPSELPPMESLTGTASSRRFSPLKIFGYL 417
>gi|284097276|ref|ZP_06385417.1| pheromone shutdown protein TraB [Candidatus Poribacteria sp.
WGA-A3]
gi|283831212|gb|EFC35181.1| pheromone shutdown protein TraB [Candidatus Poribacteria sp.
WGA-A3]
Length = 171
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN-LKVPTVGEMVDMWK 203
V LVGT HVS+ES V A+I+ +P V +EL + R L+ Q + + E++ K
Sbjct: 19 VILVGTVHVSRESADLVRAVIEEERPDAVCVELDARRYEALSQQQKWEAFDLKEVIR--K 76
Query: 204 KKHNTF--GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTW 261
K+ +T +L + + ++ L + PG+E A A K+ + L DR V++T+RR W
Sbjct: 77 KQLSTMLANVLLASYQKRLGDQLGVLPGTEMLEAVNVANKHDIPIFLCDRDVRVTMRRAW 136
Query: 262 EKMPLWHKIKLLYSFLFQAF 281
P + K L+ S + F
Sbjct: 137 RSTPFFKKSMLVSSLIVSVF 156
>gi|224155652|ref|XP_002189624.1| PREDICTED: traB domain-containing protein-like, partial
[Taeniopygia guttata]
Length = 236
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 25/192 (13%)
Query: 212 LYSWFLAKVASH----LEIFPGSEFRVAFEEAMKY-GGKVILGDRPVQITLRRTWEKMPL 266
L L KV++H L + PG EFR AF+EA K K LGDRP+ +T +R +
Sbjct: 7 LMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSF 66
Query: 267 WHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQ 326
W K+KL + F + + S +D+ + ++ D+L ++ EM FP L T+V ERD
Sbjct: 67 WQKVKLAWGLCFLSDPI-SKDDVEKCKQK----DLLEQMMAEMIGEFPDLHRTIVSERDI 121
Query: 327 YMSSTLLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTIP 371
Y++ L + A + S VV VVG GH+ GI+ W + + ++M++P
Sbjct: 122 YLTYMLKQAAKQIELPRASENEPRKYIPSVVVGVVGMGHVPGIEKNWNSDLKIQEIMSVP 181
Query: 372 SPKPAVSALKVL 383
P + K +
Sbjct: 182 PPSASSKIFKFV 193
>gi|257051523|ref|YP_003129356.1| TraB family protein [Halorhabdus utahensis DSM 12940]
gi|256690286|gb|ACV10623.1| TraB family protein [Halorhabdus utahensis DSM 12940]
Length = 499
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 137 TAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVG 196
+ GG V+L+GTAHVS ES VE I+ +P VV +EL R L ++ P
Sbjct: 11 SGAGGEGSVHLLGTAHVSAESAERVERTIEDEQPDVVAVELDEGRYRQLKGES---PDDI 67
Query: 197 EMVDMWKKKHNTFGILYSWFL----AKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRP 252
E D+ + + F L W L A++ ++ PG++ E A G V L DR
Sbjct: 68 EASDL-LEGNTVFQFLAYWMLSYVQARLGDRFDVTPGADMMAGVETAEAAGIDVALVDRD 126
Query: 253 VQITLRRTWEKMPLWHKIKLLYSFL 277
+Q T++R W+++ K+KL L
Sbjct: 127 IQTTVQRFWKRLTGLEKLKLFGGML 151
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 277 LFQAFFLPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKV 335
L AF ED+ ++++ D D+++ +++E + P E L+ ERD Y++ L+ +
Sbjct: 214 LLAAFSGFEDEDVEEFDIEQLTDTDVVSAMMEEFRRFSPGGAEALIDERDAYIAHQLVGL 273
Query: 336 ATEHSSVVAVVGKGHLQGIKNYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
+ VVAVVG GH GI+ Y P +P D +T S K+L L
Sbjct: 274 REAGADVVAVVGAGHRAGIQGYLDNPETLPPMDSLTGTISGRRFSLYKILGYL 326
>gi|448396108|ref|ZP_21569122.1| TraB determinant protein [Haloterrigena salina JCM 13891]
gi|445659956|gb|ELZ12755.1| TraB determinant protein [Haloterrigena salina JCM 13891]
Length = 589
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V ++GTAHVS+ S EV ID +P VV +EL +R + G+++
Sbjct: 23 VTVLGTAHVSQSSVDEVHETIDQEQPDVVAVELDENRYRQMQGGAPDDIEAGDLL----S 78
Query: 205 KHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ F L W L+ V S L +I PG++ R A E A + G V L DR +Q+T++R
Sbjct: 79 GNTVFQFLAYWMLSYVQSRLGDQFDIEPGADMRAAIEAAERNGSGVALVDRDIQVTIQRF 138
Query: 261 WEKMPLWHKIKLL 273
W + + K+K++
Sbjct: 139 WRGLSITEKLKMV 151
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
++EM D D++ +++E + P L+ ERD Y+++ L ++ + V+AVVG GH
Sbjct: 321 IEEMTDGDVVAAMMEEFRQFSPRGANALIDERDAYIATHLHRLREQGYDVLAVVGAGHKA 380
Query: 353 GIKNYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
GI+ + + P +P + ++ + S LK++ L
Sbjct: 381 GIERHLENPSGIPSLESLSGTTSSSRFSPLKIVGYL 416
>gi|448373928|ref|ZP_21557813.1| TraB determinant protein, partial [Halovivax asiaticus JCM 14624]
gi|445660605|gb|ELZ13400.1| TraB determinant protein, partial [Halovivax asiaticus JCM 14624]
Length = 198
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 14/142 (9%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVD 200
++ +VGTAHVS+ S EV I+ P VV +EL R + TP ++ E D
Sbjct: 22 EITVVGTAHVSQASVDEVTETIEEESPDVVAVELDEGRYRQMKGGTPDDI------EAAD 75
Query: 201 MWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ + F L W L+ V S L ++ PG++ + A + A + G V L DR +Q+T
Sbjct: 76 LLSG-NTVFQFLAYWMLSYVQSQLGDRFDVEPGADMKAAIDTAERNGLGVALVDRDIQVT 134
Query: 257 LRRTWEKMPLWHKIKLLYSFLF 278
++R W ++ + K KL+ F
Sbjct: 135 MQRFWSRLTVGEKAKLVGGLAF 156
>gi|448321145|ref|ZP_21510625.1| TraB determinant protein [Natronococcus amylolyticus DSM 10524]
gi|445604005|gb|ELY57956.1| TraB determinant protein [Natronococcus amylolyticus DSM 10524]
Length = 589
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVD 200
G V ++GTAHVSK S EV +D KP VV +EL +R + P E D
Sbjct: 18 GRGSVDVLGTAHVSKASVDEVHETVDERKPDVVAVELDENRYRQMQG---GAPDDIEAKD 74
Query: 201 MWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ + F L W L+ V S L +I PG++ R A E A + V L DR +QIT
Sbjct: 75 L-LSGNTVFQFLAYWMLSYVQSRLGSRFDIEPGADMRAAIEAAERNASGVALVDRDIQIT 133
Query: 257 LRRTWEKMPLWHKIKLL 273
++R W ++ K+K++
Sbjct: 134 IQRFWTRLSFAEKLKMV 150
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
M D D++ +++E + P E L+ ERD Y++ L + + VVAVVG GH GI+
Sbjct: 324 MTDGDVVAAMMEEFRRFSPRGAEALIDERDAYIAHKLHGLREQGYHVVAVVGAGHKAGIE 383
Query: 356 NYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
Y + P +P + +T + S +KV+ L
Sbjct: 384 RYLEHPGELPPMESLTGTASGRRFSPVKVVGYL 416
>gi|119593903|gb|EAW73497.1| hypothetical protein PP2447, isoform CRA_a [Homo sapiens]
gi|119593905|gb|EAW73499.1| hypothetical protein PP2447, isoform CRA_a [Homo sapiens]
Length = 263
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 25/190 (13%)
Query: 204 KKHNTFGILYSWFLAKVASH----LEIFPGSEFRVAFEEAMKY-GGKVILGDRPVQITLR 258
+++ L L KV++H L + PG EFR AF+EA K K LGDRP+ +T +
Sbjct: 26 RQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFK 85
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
R + W K++L + F + + S +D+ R ++ D+L ++ EM FP L
Sbjct: 86 RAIAALSFWQKVRLAWGLCFLSDPI-SKDDVERCKQK----DLLEQMMAEMIGEFPDLHR 140
Query: 319 TLVHERDQYMSSTLLKVATE---------------HSSVVAVVGKGHLQGIKNYWKQPVP 363
T+V ERD Y++ L + A S VV VVG GH+ GI+ W +
Sbjct: 141 TIVSERDVYLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLN 200
Query: 364 VHDLMTIPSP 373
+ ++MT+P P
Sbjct: 201 IQEIMTVPPP 210
>gi|448406801|ref|ZP_21573233.1| TraB determinant protein [Halosimplex carlsbadense 2-9-1]
gi|445676607|gb|ELZ29124.1| TraB determinant protein [Halosimplex carlsbadense 2-9-1]
Length = 599
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 78/142 (54%), Gaps = 14/142 (9%)
Query: 139 EGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTV 195
E G +V+++GTAHVS++S ++VE I KP VV +EL R L TP ++ P
Sbjct: 22 ERGEGEVHVLGTAHVSEQSVQDVEETIAERKPDVVAVELDEGRFRQLKGETPDDID-P-- 78
Query: 196 GEMVDMWKKKHNTFGILYSWFLAKVASH----LEIFPGSEFRVAFEEAMKYGGKVILGDR 251
G+M+ + + F L W L+ V + L + PG++ A + A K+G V L DR
Sbjct: 79 GDML----RGNTVFQFLAYWMLSYVQTRMGKKLGVDPGADMLAAVDSAEKHGLGVALVDR 134
Query: 252 PVQITLRRTWEKMPLWHKIKLL 273
+Q+T++R W ++ KI +L
Sbjct: 135 DIQLTVQRFWARLSPLRKISML 156
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 298 DVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNY 357
D D++T +++E + P E L+ ERD +++ L+ + SVVAVVG GH +GI+ Y
Sbjct: 334 DADVVTAMMEEFRRFAPGAAEALIDERDAFIAHRLVALREAGYSVVAVVGAGHREGIERY 393
Query: 358 WKQP 361
P
Sbjct: 394 LADP 397
>gi|448339183|ref|ZP_21528213.1| TraB determinant protein [Natrinema pallidum DSM 3751]
gi|445620689|gb|ELY74178.1| TraB determinant protein [Natrinema pallidum DSM 3751]
Length = 590
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 16/143 (11%)
Query: 138 AEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPT 194
+GG+ +V +GTAHVS+ S EV + P VV +EL R + TP +++
Sbjct: 18 GDGGSVEV--LGTAHVSQASVDEVRETVASEDPDVVAVELDEGRYRQMQGGTPDDIE--- 72
Query: 195 VGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGD 250
G+++ + F L W L+ V S L +I PG++ R A E A G V L D
Sbjct: 73 AGDLL----SGNTVFQFLAYWMLSYVQSRLGDQFDIEPGADMRAAIEAAETNGSGVALVD 128
Query: 251 RPVQITLRRTWEKMPLWHKIKLL 273
R +Q+T++R W ++ + K+K++
Sbjct: 129 RDIQVTIQRFWSRLSVMEKLKMV 151
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
M D +++ +++E + P L+ ERD Y++ L ++ + V+AVVG GH GI+
Sbjct: 325 MTDGNVVDAMMEEFRQFSPGGANALIDERDAYIAHNLHELREQGYDVLAVVGAGHKAGIE 384
Query: 356 NYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
+ P +P + ++ + S LKV+ L
Sbjct: 385 RHLLNPDEIPTLESLSGTASSRRFSPLKVVGYL 417
>gi|338706900|ref|YP_004673668.1| TraB family protein [Treponema paraluiscuniculi Cuniculi A]
gi|335344961|gb|AEH40877.1| TraB family protein [Treponema paraluiscuniculi Cuniculi A]
Length = 392
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 16/230 (6%)
Query: 132 LTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNL 190
LTC E G+ V L+G A S+E+ V I +PQ V +E+ +R +L +
Sbjct: 5 LTC---LEFGSRRVVLMGVACTSQEAVECVRRTIRARRPQCVCVEVDDARAQDLLGMRQW 61
Query: 191 KVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGD 250
+ + ++ K + S F +++S + G E + A E A + +V D
Sbjct: 62 QEYDLARVLREGKGFFLLSTLALSAFQKRLSSGTGVRLGDEVKAAIEVAAELSAQVAYID 121
Query: 251 RPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR----MLKEMDDVDMLTLVI 306
R +++TLRR W + W + KLL L AF + E L+ +L +D L +
Sbjct: 122 RSIEVTLRRAWRVLNPWGRAKLLAVLLSVAF---TGEQLSEQRVAVLCAHGAMDGL---M 175
Query: 307 QEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKN 356
QE+ P + LV ER+QY++S + A + V+AVV G + G++
Sbjct: 176 QEIVSFLPAVKGVLVDERNQYLASKIW--AADSQVVMAVVSAGSVAGVQR 223
>gi|448328416|ref|ZP_21517727.1| TraB determinant protein [Natrinema versiforme JCM 10478]
gi|445615597|gb|ELY69238.1| TraB determinant protein [Natrinema versiforme JCM 10478]
Length = 589
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDM 201
V ++GTAHVS+ S EV ID P VV +EL R + TP +++ G+++
Sbjct: 23 VEVLGTAHVSQASVDEVRETIDREDPDVVAVELDEGRYRQMQGGTPDDIEA---GDLL-- 77
Query: 202 WKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ F L W L+ V S L +I PG++ R E A G V L DR +Q+T+
Sbjct: 78 --SGNTVFQFLAYWMLSYVQSRLGDQFDIEPGADMRAGIEAAEANGSGVALVDRDIQVTI 135
Query: 258 RRTWEKMPLWHKIKLL 273
+R W ++ K+K++
Sbjct: 136 QRFWSRLSFTEKLKMV 151
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 287 EDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAV 345
ED++ + ++E+ D D++ +++E + P L+ ERD Y++ L ++ + V+AV
Sbjct: 315 EDVDELDMEELTDGDVVNAMMEEFRRFSPRGANALIDERDAYIAHNLHELREQGYDVLAV 374
Query: 346 VGKGHLQGIKNYWKQPVPVHDLMTI 370
VG GH GI+++ P + L +I
Sbjct: 375 VGAGHKAGIEHHLLNPAEIPSLESI 399
>gi|28199343|ref|NP_779657.1| pheromone shutdown protein [Xylella fastidiosa Temecula1]
gi|182682068|ref|YP_001830228.1| TraB family protein [Xylella fastidiosa M23]
gi|386083389|ref|YP_005999671.1| TraB family protein [Xylella fastidiosa subsp. fastidiosa GB514]
gi|417557993|ref|ZP_12208991.1| pheromone shutdown protein [Xylella fastidiosa EB92.1]
gi|28057449|gb|AAO29306.1| pheromone shutdown protein [Xylella fastidiosa Temecula1]
gi|182632178|gb|ACB92954.1| TraB family protein [Xylella fastidiosa M23]
gi|307578336|gb|ADN62305.1| TraB family protein [Xylella fastidiosa subsp. fastidiosa GB514]
gi|338179390|gb|EGO82338.1| pheromone shutdown protein [Xylella fastidiosa EB92.1]
Length = 405
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 10/216 (4%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAH+S+ S V+ ++ + +EL + R+ L P L + +++ +
Sbjct: 29 LLGTAHISQASVAAVKQEVESGCYDAIAVELDAQRLQALCDPDTLAKLDLIQVIRKGQLA 88
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A + V L DR V +T +R K+
Sbjct: 89 LFAANLALAAYQRRLAKQLGIEPGAELKTAVTMARERDLPVHLIDREVGLTFKRASAKLG 148
Query: 266 LWHKIKL---LYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
K+KL L + LF A + E ++++ DML + + P L +T++
Sbjct: 149 FLGKMKLGGGLIAGLFAADEVGEEE-----IEKLKQGDMLEASFGDFANESPELYQTIIA 203
Query: 323 ERDQYMSSTLL-KVATEHSSVVAVVGKGHLQGIKNY 357
ERD+YM++ L +V + V+ VVG GHL G+ +
Sbjct: 204 ERDRYMATRLREEVNSATPKVLVVVGAGHLTGLAKH 239
>gi|397775102|ref|YP_006542648.1| TraB determinant protein [Natrinema sp. J7-2]
gi|397684195|gb|AFO58572.1| TraB determinant protein [Natrinema sp. J7-2]
Length = 589
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 16/143 (11%)
Query: 138 AEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPT 194
+GG+ +V +GTAHVS+ S EV + P VV +EL R + TP +++
Sbjct: 18 GDGGSVEV--LGTAHVSQASVDEVRETVAREDPDVVAVELDEGRYRQMQGGTPDDIE--- 72
Query: 195 VGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGD 250
G+++ + F L W L+ V S L +I PG++ R A E A G V L D
Sbjct: 73 AGDLL----SGNTVFQFLAYWMLSYVQSRLGDQFDIEPGADMRAAIEAAETNGSGVALVD 128
Query: 251 RPVQITLRRTWEKMPLWHKIKLL 273
R +Q+T++R W ++ + K+K++
Sbjct: 129 RDIQVTIQRFWSRLSVMEKLKMV 151
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
M D +++ +++E + P L+ ERD Y++ L ++ + V+AVVG GH GI+
Sbjct: 325 MTDGNVVDAMMEEFRQFSPGGANALIDERDAYIAHNLHELREQGYDVLAVVGAGHKAGIE 384
Query: 356 NYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
+ +QP +P + ++ + S LKV+ L
Sbjct: 385 RHLQQPEEIPTLESLSGTASSRRFSPLKVVGYL 417
>gi|15839035|ref|NP_299723.1| pheromone shutdown protein [Xylella fastidiosa 9a5c]
gi|9107637|gb|AAF85243.1|AE004053_6 pheromone shutdown protein [Xylella fastidiosa 9a5c]
Length = 405
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 10/216 (4%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAH+S+ S V+ ++ + +EL + R+ L P L + +++ +
Sbjct: 29 LLGTAHISQASVAAVKQEVESGCYDAIAVELDAQRLQALCDPDTLAKLDLIQVIRKGQLA 88
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A + V L DR V +T +R K+
Sbjct: 89 LFAANLALAAYQRRLAKQLGIEPGAELKTAVTMARERDLPVHLIDREVGLTFKRASAKLG 148
Query: 266 LWHKIKL---LYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
K+KL L + LF A + E ++++ DML + + P L +T++
Sbjct: 149 FLGKLKLGSGLIAGLFAADEVGEEE-----IEKLKQGDMLEASFGDFASESPELYQTIIA 203
Query: 323 ERDQYMSSTLL-KVATEHSSVVAVVGKGHLQGIKNY 357
ERD+YM++ L +V + V+ VVG GHL G+ +
Sbjct: 204 ERDRYMATRLREEVNSTTPKVLVVVGAGHLTGLAKH 239
>gi|322370385|ref|ZP_08044944.1| TraB family protein [Haladaptatus paucihalophilus DX253]
gi|320550093|gb|EFW91748.1| TraB family protein [Haladaptatus paucihalophilus DX253]
Length = 572
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 12/146 (8%)
Query: 137 TAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVG 196
++ GG +V +VGTAHVS+ S VE I+ +P++V +EL R + + V
Sbjct: 8 SSGGGEGNVRVVGTAHVSETSVERVEEAIEEDQPEIVAVELDEGRYRQMQGE------VA 61
Query: 197 EMVDMWKKKHNT--FGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGD 250
+ +D H F L W L+ V S + +I PG++ + A + A ++G V L D
Sbjct: 62 DDLDPSDLLHGNTVFQFLAYWMLSYVQSRMGEEFDIQPGADMKAAIDAAERHGSGVALVD 121
Query: 251 RPVQITLRRTWEKMPLWHKIKLLYSF 276
R +Q+T++R W +M K++++ S
Sbjct: 122 RDIQMTIQRFWARMSAREKLRMVGSL 147
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
+ D D++T +++E + P E L+ ERD +++ L+ + V+AVVG GH GI+
Sbjct: 307 LTDGDVVTAMMEEFRRFSPGGAEALIDERDAFIAHKLVALREAGHDVIAVVGAGHRAGIE 366
Query: 356 NYWKQP 361
+Y P
Sbjct: 367 SYLANP 372
>gi|378973474|ref|YP_005222080.1| TraB family protein [Treponema pallidum subsp. pertenue str.
SamoaD]
gi|378974540|ref|YP_005223148.1| TraB family protein [Treponema pallidum subsp. pertenue str.
Gauthier]
gi|378982449|ref|YP_005230756.1| TraB family protein [Treponema pallidum subsp. pertenue str. CDC2]
gi|374677799|gb|AEZ58092.1| TraB family protein [Treponema pallidum subsp. pertenue str.
SamoaD]
gi|374678868|gb|AEZ59160.1| TraB family protein [Treponema pallidum subsp. pertenue str. CDC2]
gi|374679937|gb|AEZ60228.1| TraB family protein [Treponema pallidum subsp. pertenue str.
Gauthier]
Length = 392
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 16/230 (6%)
Query: 132 LTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNL 190
LTC E G+ V L+G A S+E+ V I +PQ V +E+ +R +L +
Sbjct: 5 LTC---LEFGSRRVVLMGVACTSQEAVECVRRTIRARRPQCVCVEVDDARAQDLLGMRQW 61
Query: 191 KVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGD 250
+ + ++ K + S F +++S + G E + A E A + +V D
Sbjct: 62 QEYDLARVLREGKGFFLLSTLALSAFQKRLSSGTGVRLGDEVKAAIEVAAELSAQVAYID 121
Query: 251 RPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR----MLKEMDDVDMLTLVI 306
R +++TLRR W + W + KLL L AF + E L+ +L +D L +
Sbjct: 122 RSIEVTLRRAWRVLNPWGRAKLLAVLLSVAF---TGEQLSEQRVAVLCAHGAMDGL---M 175
Query: 307 QEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKN 356
QE+ P + LV ER+QY++S + A + V+AVV G + G++
Sbjct: 176 QEIISFLPAVKGVLVDERNQYLASKIW--AVDSQVVMAVVSAGSVAGVQR 223
>gi|448305396|ref|ZP_21495328.1| TraB determinant protein [Natronorubrum sulfidifaciens JCM 14089]
gi|445589243|gb|ELY43479.1| TraB determinant protein [Natronorubrum sulfidifaciens JCM 14089]
Length = 590
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDM 201
++++GTAHVS+ S +V ID P VV +EL R + TP +++ +
Sbjct: 23 IHVLGTAHVSQASVDDVHETIDRENPDVVAVELDEGRYRQMQGGTPDDIEAKDL------ 76
Query: 202 WKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ F L W L+ V S L +I PGS+ R A E A + V L DR +Q+T+
Sbjct: 77 -LSGNTVFQFLAYWMLSYVQSRLGEKFDIEPGSDMRAAIEAAERNDSGVALVDRDIQVTI 135
Query: 258 RRTWEKMPLWHKIKLL 273
+R W ++ K+K++
Sbjct: 136 QRFWRRLSFTEKLKMV 151
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 287 EDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAV 345
ED++ + ++EM D D++ +++E + P L+ ERD Y++ L + + VVAV
Sbjct: 315 EDIDEVDIEEMTDGDVVAAMMEEFRRFSPRGANALIDERDAYIAHHLHDLRQQGYDVVAV 374
Query: 346 VGKGHLQGIKNYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
VG GH GI+ + + P +P + ++ + K S LK+ L
Sbjct: 375 VGAGHKAGIERHLETPSGIPTLESLSGTASKRRFSPLKIAGYL 417
>gi|378975597|ref|YP_005224207.1| TraB family protein [Treponema pallidum subsp. pallidum DAL-1]
gi|374680997|gb|AEZ61287.1| TraB family protein [Treponema pallidum subsp. pallidum DAL-1]
Length = 392
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 16/230 (6%)
Query: 132 LTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNL 190
LTC E G+ V L+G A S+E+ V I +PQ V +E+ +R +L +
Sbjct: 5 LTC---LEFGSRRVVLMGVACTSQEAIECVRRTIRARRPQCVCVEVDDARAQDLLGMRQW 61
Query: 191 KVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGD 250
+ + ++ K + S F +++S + G E + A E A + +V D
Sbjct: 62 QEYDLARVLREGKGFFLLSTLALSAFQKRLSSGTGVRLGDEVKAAIEVAAELSAQVAYID 121
Query: 251 RPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR----MLKEMDDVDMLTLVI 306
R +++TLRR W + W + KLL L AF + E L+ +L +D L +
Sbjct: 122 RSIEVTLRRAWRVLNPWGRAKLLAVLLSVAF---TGEQLSEQRVAVLCAHGAMDGL---M 175
Query: 307 QEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKN 356
QE+ P + LV ER+QY++S + A + V+AVV G + G++
Sbjct: 176 QEIISFLPAVKGVLVDERNQYLASKIW--AVDSQVVMAVVSAGSVAGVQR 223
>gi|448343907|ref|ZP_21532824.1| TraB determinant protein [Natrinema gari JCM 14663]
gi|445621990|gb|ELY75455.1| TraB determinant protein [Natrinema gari JCM 14663]
Length = 589
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 16/143 (11%)
Query: 138 AEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPT 194
+GG+ +V +GTAHVS+ S EV + P VV +EL R + TP +++
Sbjct: 18 GDGGSVEV--LGTAHVSQASVDEVRETVAREDPDVVAVELDEGRYRQMQGGTPDDIE--- 72
Query: 195 VGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGD 250
G+++ + F L W L+ V S L +I PG++ R A E A G V L D
Sbjct: 73 AGDLL----SGNTVFQFLAYWMLSYVQSRLGDQFDIEPGADMRAAIEAAETNGSGVALVD 128
Query: 251 RPVQITLRRTWEKMPLWHKIKLL 273
R +Q+T++R W ++ K+K++
Sbjct: 129 RDIQVTIQRFWSRLSFLEKLKMV 151
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
M D +++ +++E + P L+ ERD Y++ L ++ + V+AVVG GH GI+
Sbjct: 325 MTDGNVVDAMMEEFRQFSPGGANALIDERDAYIAHNLHELREQGYDVLAVVGAGHKAGIE 384
Query: 356 NYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
+ +QP +P + ++ + S LK++ L
Sbjct: 385 RHLQQPEEIPTLESLSGTASSRRFSPLKIVGYL 417
>gi|15639937|ref|NP_219390.1| pheromone shutdown protein (traB) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189026176|ref|YP_001933948.1| pheromone shutdown protein [Treponema pallidum subsp. pallidum
SS14]
gi|408502800|ref|YP_006870244.1| TraB family protein [Treponema pallidum subsp. pallidum str. Mexico
A]
gi|3323273|gb|AAC65908.1| pheromone shutdown protein (traB) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018751|gb|ACD71369.1| pheromone shutdown protein [Treponema pallidum subsp. pallidum
SS14]
gi|408476163|gb|AFU66928.1| TraB family protein [Treponema pallidum subsp. pallidum str. Mexico
A]
Length = 396
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 16/230 (6%)
Query: 132 LTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNL 190
LTC E G+ V L+G A S+E+ V I +PQ V +E+ +R +L +
Sbjct: 9 LTC---LEFGSRRVVLMGVACTSQEAIECVRRTIRARRPQCVCVEVDDARAQDLLGMRQW 65
Query: 191 KVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGD 250
+ + ++ K + S F +++S + G E + A E A + +V D
Sbjct: 66 QEYDLARVLREGKGFFLLSTLALSAFQKRLSSGTGVRLGDEVKAAIEVAAELSAQVAYID 125
Query: 251 RPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR----MLKEMDDVDMLTLVI 306
R +++TLRR W + W + KLL L AF + E L+ +L +D L +
Sbjct: 126 RSIEVTLRRAWRVLNPWGRAKLLAVLLSVAF---TGEQLSEQRVAVLCAHGAMDGL---M 179
Query: 307 QEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKN 356
QE+ P + LV ER+QY++S + A + V+AVV G + G++
Sbjct: 180 QEIISFLPAVKGVLVDERNQYLASKIW--AVDSQVVMAVVSAGSVAGVQR 227
>gi|448678145|ref|ZP_21689335.1| plasmid transfer protein [Haloarcula argentinensis DSM 12282]
gi|445773820|gb|EMA24853.1| plasmid transfer protein [Haloarcula argentinensis DSM 12282]
Length = 510
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 14/143 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
GT V +VGTAHVS+ S EVE+ I+ +P +V +EL R + TP +L +
Sbjct: 17 GTGRVDVVGTAHVSEHSVAEVESAIEESEPDIVAVELDEGRYRQIKGETPDDLDASDL-- 74
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F L W L+ + + L +I PG++ + + A + G V L DR +
Sbjct: 75 -----LRGNTVFQFLAYWMLSYIQTRLGDRFDIEPGADMKAGIDTAERLGLGVALVDRDI 129
Query: 254 QITLRRTWEKMPLWHKIKLLYSF 276
Q T++R W ++ K+KL+ S
Sbjct: 130 QTTVQRFWARLTTVEKLKLVGSL 152
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
++++ D D+++ +++E + P E L+ ERD +++ L+ + V+AVVG GH +
Sbjct: 243 MEKLTDTDVVSAMMEEFRQFSPGGAEALIDERDAFIAHRLIALREAGYHVLAVVGAGHRE 302
Query: 353 GIKNYWKQP 361
GI+NY P
Sbjct: 303 GIQNYLDNP 311
>gi|384422442|ref|YP_005631801.1| pheromone shutdown protein [Treponema pallidum subsp. pallidum str.
Chicago]
gi|291060308|gb|ADD73043.1| pheromone shutdown protein [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 394
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 16/230 (6%)
Query: 132 LTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNL 190
LTC E G+ V L+G A S+E+ V I +PQ V +E+ +R +L +
Sbjct: 7 LTC---LEFGSRRVVLMGVACTSQEAIECVRRTIRARRPQCVCVEVDDARAQDLLGMRQW 63
Query: 191 KVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGD 250
+ + ++ K + S F +++S + G E + A E A + +V D
Sbjct: 64 QEYDLARVLREGKGFFLLSTLALSAFQKRLSSGTGVRLGDEVKAAIEVAAELSAQVAYID 123
Query: 251 RPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR----MLKEMDDVDMLTLVI 306
R +++TLRR W + W + KLL L AF + E L+ +L +D L +
Sbjct: 124 RSIEVTLRRAWRVLNPWGRAKLLAVLLSVAF---TGEQLSEQRVAVLCAHGAMDGL---M 177
Query: 307 QEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKN 356
QE+ P + LV ER+QY++S + A + V+AVV G + G++
Sbjct: 178 QEIISFLPAVKGVLVDERNQYLASKIW--AVDSQVVMAVVSAGSVAGVQR 225
>gi|71729782|gb|EAO31882.1| Pheromone shutdown protein [Xylella fastidiosa Ann-1]
Length = 405
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 10/216 (4%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAH+S+ S V+ ++ + +EL + R+ L P L + +++ +
Sbjct: 29 LLGTAHISQASVAAVKQEVESGCYDAIAVELDAQRLQALCDPDTLAKLDLIQVIRKGQLA 88
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A + V L DR V +T +R K+
Sbjct: 89 LFAANLALAAYQRRLAKQLGIEPGAELKTAVTMARERDLPVHLIDREVGLTFKRASAKLG 148
Query: 266 LWHKIKL---LYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVH 322
K+KL L + LF A + E ++++ DML + + P L +T++
Sbjct: 149 FLGKMKLGGGLIAGLFAADEVGEEE-----IEKLKQGDMLEASFGDFASESPELYQTIIA 203
Query: 323 ERDQYMSSTLL-KVATEHSSVVAVVGKGHLQGIKNY 357
ERD+YM++ L +V + V+ VVG GHL G+ +
Sbjct: 204 ERDRYMATRLREEVNSTTPKVLVVVGAGHLTGLAKH 239
>gi|448345188|ref|ZP_21534087.1| TraB determinant protein [Natrinema altunense JCM 12890]
gi|445635812|gb|ELY88978.1| TraB determinant protein [Natrinema altunense JCM 12890]
Length = 590
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 16/143 (11%)
Query: 138 AEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPT 194
+GG+ +V +GTAHVS+ S EV + P VV +EL R + TP +++
Sbjct: 18 GDGGSVEV--LGTAHVSQASVDEVREAVAREDPDVVAVELDEGRYRQMQGGTPDDIE--- 72
Query: 195 VGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGD 250
G+++ + F L W L+ V S L +I PG++ R A E A G V L D
Sbjct: 73 AGDLL----SGNTVFQFLAYWMLSYVQSRLGDQFDIEPGADMRAAIEAAETNGSGVALVD 128
Query: 251 RPVQITLRRTWEKMPLWHKIKLL 273
R +Q+T++R W ++ + K+K++
Sbjct: 129 RDIQVTIQRFWSRLSVMEKLKMV 151
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
M D +++ +++E + P L+ ERD Y++ L ++ + V+AVVG GH GI+
Sbjct: 325 MTDGNVVDAMMEEFRQFSPGGANALIDERDAYIAHNLHELREQGYDVLAVVGAGHKAGIE 384
Query: 356 NYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
+ P +P + ++ + S LK++ L
Sbjct: 385 RHLLHPDEIPTLESLSGTASSRRFSPLKIVGYL 417
>gi|14521307|ref|NP_126782.1| pheromone shutdown protein (traB) [Pyrococcus abyssi GE5]
gi|5458525|emb|CAB50013.1| Signaling protein [Pyrococcus abyssi GE5]
gi|380741881|tpe|CCE70515.1| TPA: pheromone shutdown protein (traB) [Pyrococcus abyssi GE5]
Length = 225
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V +VGT HVS ES EV II P + LEL R+ + + T + + + K
Sbjct: 10 VKIVGTVHVSSESVNEVRRIILEEDPDAIALELDYERLL--SLLSGSNLTFSQAMKLGK- 66
Query: 205 KHNTFGILYSWFLAKV----ASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
GIL ++ L +V L PGSE AFE A G V + D+P+++TLR+
Sbjct: 67 ----MGIL-AYILQEVEIILGKELGTPPGSEMIEAFEVAKTLGIPVYMIDQPIRVTLRKL 121
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
+PL KI+ + + F P A+ +DV+ L+ E + +PT+ + L
Sbjct: 122 L-SIPLGEKIRAMLD-IISTFINPGAQT----QLSFEDVEGLSF---EFRRKYPTMYKIL 172
Query: 321 VHERDQYMSSTLLKVA------TEHSSVVAVVGKGHLQGIKNYWKQPVP 363
V ER+ YM+ ++++ + VVAVVG GH +GI+ + P
Sbjct: 173 VEERNLYMARNIMRIVDILLERKKKVKVVAVVGLGHKKGIEKILSRSFP 221
>gi|281209131|gb|EFA83306.1| hypothetical protein PPL_04096 [Polysphondylium pallidum PN500]
Length = 462
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 67/277 (24%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLK----------- 191
DV+++GT+H+SK S +V+ I +KP V LELC R + L Q++K
Sbjct: 184 DVFVIGTSHISKRSANQVKQFIRDVKPDTVVLELCQQRYNKLKDEQHVKNIEPYQATRPM 243
Query: 192 VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLE---IFPGSEFRVAFEEAMKYGGKVIL 248
+ E++ M + + G + + + + I PG EF+ A EA G K+ L
Sbjct: 244 QSIMMEVMAMIRSGRGSPGDILALLMKNYYNTFRVMGIVPGLEFKFAINEADLLGSKIEL 303
Query: 249 GDRPVQITLRR-----TWEKMPLWHKIKLLYSFL-------------------------- 277
GD PV T+R E +PL +++ +
Sbjct: 304 GDLPVNDTMRNLASTLMLEALPLLGGNQMMGGMMGNMMNGMMGNMMNGMNQNQNQQNSEQ 363
Query: 278 -------FQAFFLPSAEDLNR-------MLKEMDDVDMLTLVIQEM----SKAFPTLMET 319
LP A L++ + KE +V M +QEM SK P
Sbjct: 364 VLSELARLSNIMLPLANVLSKPTVTEEELEKEFKNV-MTNANLQEMRAIFSKNLPKTFNA 422
Query: 320 LVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKN 356
+ +R++ ++ST+L ++ + V+AVVG H+QGIK+
Sbjct: 423 FLLDRERNITSTILN--SKGNKVLAVVGAMHVQGIKD 457
>gi|448398425|ref|ZP_21570074.1| TraB determinant protein [Haloterrigena limicola JCM 13563]
gi|445671440|gb|ELZ24028.1| TraB determinant protein [Haloterrigena limicola JCM 13563]
Length = 589
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 14/142 (9%)
Query: 139 EGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTV 195
+G + V ++GTAHVS+ S EV ID P VV +EL R + TP +++ +
Sbjct: 17 DGDSGSVEVLGTAHVSQASVDEVRETIDREDPDVVAVELDEGRYRQMQGGTPDDIEAKDL 76
Query: 196 GEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDR 251
+ F L W L+ V S L +I PG++ R E A G V L DR
Sbjct: 77 -------LSGNTVFQFLAYWMLSYVQSRLGDQFDIEPGADMRAGIEAAEANGSGVALVDR 129
Query: 252 PVQITLRRTWEKMPLWHKIKLL 273
+Q+T++R W ++ K+K++
Sbjct: 130 DIQVTIQRFWSRLSGVEKLKMV 151
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 287 EDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAV 345
+D++ + ++EM D +++ +++E + P L+ ERD Y++ L + + V+AV
Sbjct: 315 DDIDEIAIEEMTDGNVVDAMMEEFRQFSPGGANALIDERDAYIAHNLHDLREQGYDVLAV 374
Query: 346 VGKGHLQGIKNYWKQPVPV 364
VG GH GI++Y + P +
Sbjct: 375 VGAGHKAGIEHYLRNPAAL 393
>gi|344211480|ref|YP_004795800.1| putative plasmid transfer protein [Haloarcula hispanica ATCC 33960]
gi|343782835|gb|AEM56812.1| putative plasmid transfer protein [Haloarcula hispanica ATCC 33960]
Length = 510
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 14/143 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V +VGTAHVS+ S +EVE+ I+ +P +V +EL R + TP +L +
Sbjct: 18 GAGRVDVVGTAHVSEHSVKEVESAIEESEPDIVAVELDEGRYRQIKGETPDDLDASDL-- 75
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F L W L+ + + L +I PG++ + + A + G V L DR +
Sbjct: 76 -----LRGNTVFQFLAYWMLSYIQTRLGDRFDIEPGADMKAGIDTAERLGLGVALVDRDI 130
Query: 254 QITLRRTWEKMPLWHKIKLLYSF 276
Q T++R W ++ K+KL+ S
Sbjct: 131 QTTVQRFWARLTAVEKLKLVGSL 153
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
++++ D D+++ +++E + P E L+ ERD +++ L+ + V+AVVG GH +
Sbjct: 243 MEKLTDTDVVSAMMEEFRQFSPGGAEALIDERDAFIAHRLIALREAGYHVLAVVGAGHRE 302
Query: 353 GIKNYWKQP 361
GI+ Y P
Sbjct: 303 GIQGYLDDP 311
>gi|448283393|ref|ZP_21474669.1| TraB determinant protein [Natrialba magadii ATCC 43099]
gi|445574309|gb|ELY28812.1| TraB determinant protein [Natrialba magadii ATCC 43099]
Length = 601
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDM 201
V+++GTAHVS+ S +V +D +P VV +EL R + TP +++ +
Sbjct: 33 VHVLGTAHVSQASVDDVHETVDREEPDVVAVELDEGRYRQMQGGTPDDIEAKDL------ 86
Query: 202 WKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ F L W L+ V S L +I PG++ R A E A + V L DR +QIT+
Sbjct: 87 -LSGNTVFQFLAYWMLSYVQSRLGDQFDIEPGADMRAAIEAAERNDSGVSLVDRDIQITI 145
Query: 258 RRTWEKMPLWHKIKLL 273
+R W ++ K+K++
Sbjct: 146 QRFWSRLSFSEKLKMV 161
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 287 EDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAV 345
ED++ + ++EM D D++ +++E + P L+ ERD Y++ L ++ + VVAV
Sbjct: 325 EDIDEVDIEEMTDGDVVAAMMEEFRRFSPRGANALIDERDAYIAHNLHELRSHGYDVVAV 384
Query: 346 VGKGHLQGIKNYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
VG GH GI+ Y + P +P + +T + S LKV L
Sbjct: 385 VGAGHKAGIERYLENPSELPQMESLTGTASSRRFSPLKVFGYL 427
>gi|289583141|ref|YP_003481607.1| TraB determinant protein [Natrialba magadii ATCC 43099]
gi|289532694|gb|ADD07045.1| TraB determinant protein [Natrialba magadii ATCC 43099]
Length = 629
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 38/171 (22%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDM 201
V+++GTAHVS+ S +V +D +P VV +EL R + TP +++ +
Sbjct: 61 VHVLGTAHVSQASVDDVHETVDREEPDVVAVELDEGRYRQMQGGTPDDIEAKDL------ 114
Query: 202 WKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ F L W L+ V S L +I PG++ R A E A + V L DR +QIT+
Sbjct: 115 -LSGNTVFQFLAYWMLSYVQSRLGDQFDIEPGADMRAAIEAAERNDSGVSLVDRDIQITI 173
Query: 258 RRTWEKMPLWHKIK------------------------LLYSFLFQAFFLP 284
+R W ++ K+K LL F+F AF P
Sbjct: 174 QRFWSRLSFSEKLKMVGGLALGITDPRTIGLTFGAVAGLLLGFVFAAFLAP 224
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 287 EDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAV 345
ED++ + ++EM D D++ +++E + P L+ ERD Y++ L ++ + VVAV
Sbjct: 353 EDIDEVDIEEMTDGDVVAAMMEEFRRFSPRGANALIDERDAYIAHNLHELRSHGYDVVAV 412
Query: 346 VGKGHLQGIKNYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
VG GH GI+ Y + P +P + +T + S LKV L
Sbjct: 413 VGAGHKAGIERYLENPSELPQMESLTGTASSRRFSPLKVFGYL 455
>gi|389847070|ref|YP_006349309.1| plasmid transfer protein [Haloferax mediterranei ATCC 33500]
gi|448614983|ref|ZP_21664011.1| plasmid transfer protein [Haloferax mediterranei ATCC 33500]
gi|388244376|gb|AFK19322.1| plasmid transfer protein [Haloferax mediterranei ATCC 33500]
gi|445753070|gb|EMA04489.1| plasmid transfer protein [Haloferax mediterranei ATCC 33500]
Length = 559
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 14/145 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V +VGTAHVS +S REVE + +P VV +EL R L +P +++ +
Sbjct: 7 GEGHVRVVGTAHVSADSVREVEETVKAEQPDVVAVELDEGRYRQLKGGSPDDIEASDL-- 64
Query: 198 MVDMWKKKHNTFGILYSWFL----AKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F + W L A++ ++ PG++ A E A G V L DR +
Sbjct: 65 -----LRGNTVFQFIAYWMLSYVQAQMGEKFDVKPGADMLAAVETAESEGLDVALVDRNI 119
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLF 278
Q T++R W +M + K+++ LF
Sbjct: 120 QTTIQRFWRRMGIVEKMRMAGELLF 144
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
+ ++ D D+++ +++E + P E L+ ERD +++ L+ + VVAVVG GH
Sbjct: 291 MADLTDGDVVSAMMEEFRRFSPGGAEALIDERDAFIAHKLVALRQSGHDVVAVVGAGHKA 350
Query: 353 GIKNYWKQP 361
GI++Y ++P
Sbjct: 351 GIESYLERP 359
>gi|448358379|ref|ZP_21547061.1| TraB determinant protein [Natrialba chahannaoensis JCM 10990]
gi|445646012|gb|ELY99004.1| TraB determinant protein [Natrialba chahannaoensis JCM 10990]
Length = 601
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 17/146 (11%)
Query: 135 DSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLK 191
D A+G V+++GTAHVS+ S +V +D +P VV +EL R + TP +++
Sbjct: 26 DGDADG---SVHVLGTAHVSQASVDDVHETVDREQPDVVAVELDEGRYRQMQGGTPDDIE 82
Query: 192 VPTVGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVI 247
+ + L W L+ V S L +I PG++ R A E A + V
Sbjct: 83 AKDL-------LSGNTVLQFLAYWMLSYVQSRLGDQFDIEPGADMRAAIEAAERNESGVS 135
Query: 248 LGDRPVQITLRRTWEKMPLWHKIKLL 273
L DR +QIT++R W ++ K+K++
Sbjct: 136 LVDRDIQITIQRFWSRLSFLEKLKMV 161
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 287 EDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAV 345
ED++ + ++EM D D++ +++E + P L+ ERD Y++ L ++ + VVAV
Sbjct: 325 EDIDEVDIEEMTDGDVVAAMMEEFRRFSPRGANALIDERDAYIAHNLHELRSRGYDVVAV 384
Query: 346 VGKGHLQGIKNYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
VG GH GI+ Y + P +P D +T + S LKV L
Sbjct: 385 VGAGHKAGIERYLENPSELPAMDSLTGTASSRRFSPLKVFGYL 427
>gi|433638487|ref|YP_007284247.1| putative PrgY-like protein, pheromone shutdown like protein
[Halovivax ruber XH-70]
gi|433290291|gb|AGB16114.1| putative PrgY-like protein, pheromone shutdown like protein
[Halovivax ruber XH-70]
Length = 588
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 14/142 (9%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVD 200
++ +VGTAHVS+ S EV I+ P VV +EL R + TP ++ E D
Sbjct: 22 EITVVGTAHVSQASVDEVRETIEEESPDVVAVELDEGRYRQMKGGTPDDI------EAAD 75
Query: 201 MWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
+ + F L W L+ V S L ++ PG++ + A + A + G V L DR +Q+T
Sbjct: 76 LLSG-NTVFQFLAYWMLSYVQSQLGDRFDVEPGADMKAAIDTAERNGLGVALVDRDIQVT 134
Query: 257 LRRTWEKMPLWHKIKLLYSFLF 278
++R W ++ + K KL+ F
Sbjct: 135 MQRFWSRLTIGEKAKLVGGLAF 156
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 282 FLPSAEDLNRM----LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVAT 337
F PS E + + ++ D D++T +++E + P E L+ ERD ++++ L +
Sbjct: 305 FAPSNEQVEDFDDFDIDQLTDGDVVTAMMEEFRRFSPGGAEALIDERDAFIANRLHALRN 364
Query: 338 EHSSVVAVVGKGHLQGIKNYWKQP 361
E VVAVVG GH GI+ Y P
Sbjct: 365 EGYHVVAVVGAGHRAGIEQYLDNP 388
>gi|336254616|ref|YP_004597723.1| TraB determinant protein [Halopiger xanaduensis SH-6]
gi|335338605|gb|AEH37844.1| TraB determinant protein [Halopiger xanaduensis SH-6]
Length = 591
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDM 201
V ++GTAHVS+ S +V +D +P VV +EL R + TP +L+ +
Sbjct: 24 VTVLGTAHVSQASVDDVHEAVDRERPDVVAVELDEGRYRQMQGGTPDDLEAKDL------ 77
Query: 202 WKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ F L W L+ V S L +I PG++ + + A + G V L DR +Q+T+
Sbjct: 78 -LSGNTVFQFLAYWMLSYVQSRLGDQFDIEPGADMKAGIDAAERNGSGVALVDRDIQVTI 136
Query: 258 RRTWEKMPLWHKIKLL 273
+R W+++ K+K++
Sbjct: 137 QRFWQRLSFTEKLKMV 152
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
M D D+++ +++E + P L+ ERD Y++ L ++ + V+A+VG GH GI+
Sbjct: 326 MTDGDVVSAMMEEFRQFSPGGANALIDERDAYIAHNLHELREQGYDVLAIVGAGHKAGIE 385
Query: 356 NYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
Y + P +P + +T + S K++ L
Sbjct: 386 RYLQNPETLPAKESLTGTASSSRFSPAKLVGYL 418
>gi|448667016|ref|ZP_21685661.1| plasmid transfer protein [Haloarcula amylolytica JCM 13557]
gi|445772147|gb|EMA23203.1| plasmid transfer protein [Haloarcula amylolytica JCM 13557]
Length = 509
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 14/143 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G+ V +VGTAHVS+ S EVE+ I+ +P +V +EL R + TP +L +
Sbjct: 17 GSGRVDVVGTAHVSEHSVTEVESAIEESEPDIVAVELDEGRYRQIKGETPDDLDASDL-- 74
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F L W L+ + + L +I PG++ + + A + G V L DR +
Sbjct: 75 -----LRGNTVFQFLAYWMLSYIQTRLGDRFDIEPGADMKAGIDTAERLGLGVALVDRDI 129
Query: 254 QITLRRTWEKMPLWHKIKLLYSF 276
Q T++R W ++ K+KL+ S
Sbjct: 130 QTTVQRFWARLTAVEKLKLVGSL 152
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
++ + D D+++ +++E + P E L+ ERD +++ L+ + V+AVVG GH +
Sbjct: 242 METLTDTDVVSAMMEEFRQFSPGGAEALIDERDAFIAHRLIALREAGYHVLAVVGAGHRE 301
Query: 353 GIKNYWKQP 361
GI+ Y P
Sbjct: 302 GIQGYLDNP 310
>gi|448306425|ref|ZP_21496330.1| TraB determinant protein [Natronorubrum bangense JCM 10635]
gi|445598150|gb|ELY52216.1| TraB determinant protein [Natronorubrum bangense JCM 10635]
Length = 590
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDM 201
V+++GTAHVS+ S +V ID P VV +EL R + TP +++ +
Sbjct: 23 VHVLGTAHVSQASVDDVHETIDREDPDVVAVELDEGRYRQMQGGTPDDIEAKDL------ 76
Query: 202 WKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
+ F L W L+ V S L +I PG++ R A E A + V L DR +Q+T+
Sbjct: 77 -LSGNTVFQFLAYWMLSYVQSRLGERFDIEPGADMRAAIEAAERNESGVALVDRDIQVTI 135
Query: 258 RRTWEKMPLWHKIKLL 273
+R W ++ + K+K++
Sbjct: 136 QRFWRRLSVSEKLKMV 151
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 287 EDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAV 345
ED++ + ++EM D D++ +++E + P L+ ERD Y+++ L ++ + VVAV
Sbjct: 315 EDVDEIDIEEMTDGDVVAAMMEEFRRFSPRGANALIDERDAYIANHLHELRDQGYDVVAV 374
Query: 346 VGKGHLQGIKNYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
VG GH GI+ + + P +P ++ + K S LK+ L
Sbjct: 375 VGAGHKAGIERHLENPSQIPSLKSLSGTASKRRFSPLKIAGYL 417
>gi|448729815|ref|ZP_21712127.1| hypothetical protein C449_08529 [Halococcus saccharolyticus DSM
5350]
gi|445794136|gb|EMA44689.1| hypothetical protein C449_08529 [Halococcus saccharolyticus DSM
5350]
Length = 505
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V +VGTAHVS +S EVE I +P +V +E+ R + + G+++ +
Sbjct: 25 VRVVGTAHVSADSVDEVERTIADERPDIVAVEIDEGRYRQMKGEEPDDLDAGDLL----R 80
Query: 205 KHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ F L W L+ V + L +I PG++ A E A G + L DR +Q+T++R
Sbjct: 81 GNTVFQFLAYWLLSYVQTRLGDEFDITPGADMLAAIETAEDLGLGIALVDRDIQVTVQRF 140
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLN 290
W +M K+++L S L AF PSA L
Sbjct: 141 WTRMTGIEKLRMLSS-LPLAFAPPSAVALG 169
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 269 KIKLLYSFLFQAFFLPSA----EDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHER 324
+ L + LF F+ +A E ++++ D D++ +++E P E L+ ER
Sbjct: 213 ALGLGVALLFLGLFVLTAPEEGEQEELAMEDLTDADVVGAMLEEFRAFSPGGAEALIDER 272
Query: 325 DQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP 361
D +++ L+++ VVAVVG GH GI+ Y P
Sbjct: 273 DAFIAHRLVELRKAGHRVVAVVGAGHQSGIERYLDDP 309
>gi|15790013|ref|NP_279837.1| hypothetical protein VNG0874G [Halobacterium sp. NRC-1]
gi|169235736|ref|YP_001688936.1| traB family protein [Halobacterium salinarum R1]
gi|10580439|gb|AAG19317.1| possible signaling protein [Halobacterium sp. NRC-1]
gi|167726802|emb|CAP13588.1| TraB family protein [Halobacterium salinarum R1]
Length = 504
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDM 201
V +VGTAHVS +S EVE +ID P V +EL R + P +L + D+
Sbjct: 14 VRVVGTAHVSSDSVEEVERVIDDEHPDTVAVELDEGRFRQMQGDAPDDL------DATDL 67
Query: 202 WKKKHNTFGILYSWFLA----KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
K F L W L+ ++ I PG++ + A + A G V L DR +Q+T+
Sbjct: 68 LKGSM-AFQFLAYWLLSYAQRRLGEKFGIEPGADMQAAVDAANTAGADVALVDRDIQVTI 126
Query: 258 RRTWEKMPLWHKIKL 272
+R W +M L K+++
Sbjct: 127 QRFWARMSLPEKLRM 141
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
+ E+ D D+++ ++ E + P + L+ ERD +++ LL + + VVAVVG GH
Sbjct: 238 MDELTDADVVSAMMAEFRRFSPGGAQALIDERDAFIAHNLLALRAQGKDVVAVVGAGHRD 297
Query: 353 GIKNYWKQP 361
GI NY + P
Sbjct: 298 GIMNYLENP 306
>gi|448688750|ref|ZP_21694487.1| plasmid transfer protein [Haloarcula japonica DSM 6131]
gi|445778620|gb|EMA29562.1| plasmid transfer protein [Haloarcula japonica DSM 6131]
Length = 510
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 14/143 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V +VGTAHVS+ S EVE+ I+ +P +V +EL R + TP +L +
Sbjct: 17 GAGRVDVVGTAHVSEHSVTEVESAIEESEPDIVAVELDEGRYRQIKGETPDDLDASDL-- 74
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F L W L+ + + L +I PG++ + + A + G V L DR +
Sbjct: 75 -----LRGNTVFQFLAYWMLSYIQTRLGDRFDIEPGADMKAGIDTAERLGLGVALVDRDI 129
Query: 254 QITLRRTWEKMPLWHKIKLLYSF 276
Q T++R W ++ K+KL+ S
Sbjct: 130 QTTVQRFWARLTAVEKLKLVGSL 152
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 42/69 (60%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
++++ D D+++ +++E + P E L+ ERD +++ L+ + V+AVVG GH +
Sbjct: 243 MEKLTDTDVVSAMMEEFRQFSPGGAEALIDERDAFIAHRLIALREADYHVLAVVGAGHRE 302
Query: 353 GIKNYWKQP 361
GI++Y P
Sbjct: 303 GIQHYLDNP 311
>gi|55377326|ref|YP_135176.1| plasmid transfer protein [Haloarcula marismortui ATCC 43049]
gi|55230051|gb|AAV45470.1| putative plasmid transfer protein [Haloarcula marismortui ATCC
43049]
Length = 534
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 14/143 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V +VGTAHVS+ S EVE+ I+ +P +V +EL R + TP +L +
Sbjct: 42 GAGRVDVVGTAHVSEHSVTEVESAIEESEPDIVAVELDEGRYRQIKGETPDDLDASDL-- 99
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F L W L+ + + L +I PG++ + + A + G V L DR +
Sbjct: 100 -----LRGNTVFQFLAYWMLSYIQTRLGDRFDIEPGADMKAGIDTAERLGLGVALVDRDI 154
Query: 254 QITLRRTWEKMPLWHKIKLLYSF 276
Q T++R W ++ K+KL+ S
Sbjct: 155 QTTVQRFWARLTAVEKLKLVGSL 177
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
++++ D D+++ +++E + P E L+ ERD +++ L+ + V+AVVG GH +
Sbjct: 267 MEKLTDTDVVSAMMEEFRQFSPGGAEALIDERDAFIAHRLIALREAGYHVLAVVGAGHRE 326
Query: 353 GIKNYWKQP 361
GI+ Y P
Sbjct: 327 GIQGYLDNP 335
>gi|448640115|ref|ZP_21677263.1| plasmid transfer protein [Haloarcula sinaiiensis ATCC 33800]
gi|448657080|ref|ZP_21682619.1| plasmid transfer protein [Haloarcula californiae ATCC 33799]
gi|445762642|gb|EMA13863.1| plasmid transfer protein [Haloarcula sinaiiensis ATCC 33800]
gi|445763122|gb|EMA14326.1| plasmid transfer protein [Haloarcula californiae ATCC 33799]
Length = 509
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 14/143 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V +VGTAHVS+ S EVE+ I+ +P +V +EL R + TP +L +
Sbjct: 17 GAGRVDVVGTAHVSEHSVTEVESAIEESEPDIVAVELDEGRYRQIKGETPDDLDASDL-- 74
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F L W L+ + + L +I PG++ + + A + G V L DR +
Sbjct: 75 -----LRGNTVFQFLAYWMLSYIQTRLGDRFDIEPGADMKAGIDTAERLGLGVALVDRDI 129
Query: 254 QITLRRTWEKMPLWHKIKLLYSF 276
Q T++R W ++ K+KL+ S
Sbjct: 130 QTTVQRFWARLTAVEKLKLVGSL 152
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
++++ D D+++ +++E + P E L+ ERD +++ L+ + V+AVVG GH +
Sbjct: 242 MEKLTDTDVVSAMMEEFRQFSPGGAEALIDERDAFIAHRLIALREAGYHVLAVVGAGHRE 301
Query: 353 GIKNYWKQP 361
GI+ Y P
Sbjct: 302 GIQGYLDNP 310
>gi|409721242|ref|ZP_11269450.1| hypothetical protein Hham1_01674 [Halococcus hamelinensis 100A6]
gi|448724875|ref|ZP_21707379.1| hypothetical protein C447_17032 [Halococcus hamelinensis 100A6]
gi|445784695|gb|EMA35495.1| hypothetical protein C447_17032 [Halococcus hamelinensis 100A6]
Length = 498
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 133 TCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKV 192
+ AEG V +VGTAHVS ES EVE I +P VV +EL R L +
Sbjct: 5 AATTDAEG---SVRVVGTAHVSPESVGEVEETIREERPDVVAVELDEGRFRQLKGEEPDD 61
Query: 193 PTVGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVIL 248
G+++ + + F L W L+ V + L +I PG++ E A + G + L
Sbjct: 62 LAAGDLL----RGNTVFQFLAYWMLSYVQTRLGDEFDITPGADMLAGVETAEELGLGLAL 117
Query: 249 GDRPVQITLRRTWEKMPLWHKIKLLYSF 276
DR +Q+T++R W +M K +L S
Sbjct: 118 VDRDIQMTVQRFWARMTAGEKFSMLLSL 145
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 283 LPSAEDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSS 341
LP +++ + +M D D+++ +++E P E L+ ERD +++ L+ +
Sbjct: 219 LPEEDEVEEFDIADMTDTDVVSTMLEEFRGFSPGGAEALIDERDAFIAHRLVALRAGGHR 278
Query: 342 VVAVVGKGHLQGIKNYWKQP 361
VVAV+G GH++G++ Y + P
Sbjct: 279 VVAVLGAGHMEGVERYLENP 298
>gi|385804040|ref|YP_005840440.1| TraB family protein [Haloquadratum walsbyi C23]
gi|339729532|emb|CCC40795.1| TraB family protein [Haloquadratum walsbyi C23]
Length = 554
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 14/139 (10%)
Query: 142 TCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEM 198
T V +VGTAHVS ES +V+++I+ +P VV +EL R L P +L +
Sbjct: 8 TGRVRVVGTAHVSAESAEKVQSVIETEQPDVVAVELDEGRYRQLRGDEPDDLAAADL--- 64
Query: 199 VDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQ 254
+ + F L W L+ V + L ++ PG++ A + A G + L DR +
Sbjct: 65 ----LRGNTVFQFLAYWMLSYVQTRLGDRFDVQPGADMLAAIDAADATGTDIALVDRDIN 120
Query: 255 ITLRRTWEKMPLWHKIKLL 273
T+RR W +M KI+L+
Sbjct: 121 ETMRRFWNRMTRIEKIQLI 139
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
+ EM D D+++ ++ E + P E L+ ERD Y+++ L+++ + +VVAVVG GH +
Sbjct: 287 MAEMTDTDVVSAMMAEFRQFSPGGAEALIDERDAYIANRLVELRDQGQTVVAVVGAGHRE 346
Query: 353 GIKNYWKQP 361
GI+ Y P
Sbjct: 347 GIERYLTHP 355
>gi|110668574|ref|YP_658385.1| plasmid transfer protein [Haloquadratum walsbyi DSM 16790]
gi|109626321|emb|CAJ52779.1| TraB family protein [Haloquadratum walsbyi DSM 16790]
Length = 554
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 14/139 (10%)
Query: 142 TCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEM 198
T V +VGTAHVS ES +V+++I+ +P VV +EL R L P +L +
Sbjct: 8 TGRVRVVGTAHVSAESAEKVQSVIETEQPDVVAVELDEGRYRQLRGDEPDDLAAADL--- 64
Query: 199 VDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQ 254
+ + F L W L+ V + L ++ PG++ A + A G + L DR +
Sbjct: 65 ----LRGNTVFQFLAYWMLSYVQTRLGDRFDVQPGADMLAAIDAADATGTDIALVDRDIN 120
Query: 255 ITLRRTWEKMPLWHKIKLL 273
T+RR W +M KI+L+
Sbjct: 121 ETMRRFWNRMTRIEKIQLI 139
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
+ EM D D+++ ++ E + P E L+ ERD Y+++ L+++ + +VVAVVG GH +
Sbjct: 287 MAEMTDTDVVSAMMAEFRQFSPGGAEALIDERDAYIANRLVELRNQGQTVVAVVGAGHRE 346
Query: 353 GIKNYWKQP 361
GI+ Y P
Sbjct: 347 GIERYLTHP 355
>gi|337284252|ref|YP_004623726.1| putative signaling protein, TraB family [Pyrococcus yayanosii CH1]
gi|334900186|gb|AEH24454.1| Predicted signaling protein, TraB family [Pyrococcus yayanosii CH1]
Length = 224
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 29/222 (13%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V +VGT HVS +S EV I +P V +EL R++ L + + +G+ + + K
Sbjct: 7 VKVVGTMHVSPKSREEVVRTILAERPDAVAVELDPGRMASLFSE--RSVGLGDALKLGPK 64
Query: 205 KHNTFGILYSWFLAKVASHL-EIF---PGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
L ++FL K+ L E F PG E + A E A+ G + D+P+ T+ +
Sbjct: 65 G------LLAYFLQKIEEELGEDFGMRPGEEMKAAVEVALSLGIPIYPVDQPLWTTISKM 118
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
K P KI ++ L +FFLP + ++ E+DD L L +P L L
Sbjct: 119 L-KAPTREKILMVLEIL--SFFLPLSGEV-----EVDDYRTLVL---RFKTRYPYLYRVL 167
Query: 321 VHERDQYMSSTLLKVA------TEHSSVVAVVGKGHLQGIKN 356
V ER++ ++ ++ + E VVAVVG GH G++
Sbjct: 168 VDERNEVIAKNIMAIVDDLLRKKEKPKVVAVVGLGHKAGVER 209
>gi|330796428|ref|XP_003286269.1| hypothetical protein DICPUDRAFT_150212 [Dictyostelium purpureum]
gi|325083774|gb|EGC37218.1| hypothetical protein DICPUDRAFT_150212 [Dictyostelium purpureum]
Length = 402
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 108/243 (44%), Gaps = 28/243 (11%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM----LTPQNLKVPTVGEMV 199
D+YL+G+ HVSK S +V+ I +KP V LELC R L Q+L EM
Sbjct: 50 DIYLIGSIHVSKNSAYQVQKFIQDIKPDTVVLELCEERYQKIKKDLYSQDLSTYEKQEMP 109
Query: 200 DMWKKKHNTFGILYSWFLA------KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRP- 252
+ + G L FL K L + PG EF A +EA K G ++LGD
Sbjct: 110 KIPFLESLGGGFLPGNFLEMAKRFYKGIRMLGLTPGLEFLFAIKEANKLGANIVLGDTSG 169
Query: 253 ----VQITLRRTWEKMPLWHKIKL--LYSFLFQAFFLPSAEDLNRMLKEMDD-----VDM 301
++T E MP +L L +L F S +++ KE++D ++
Sbjct: 170 RDTIAKVTAAMKSEIMPKQDSYELGKLSQYLGPIFEKLSKDNVTE--KELEDEFKKLLNN 227
Query: 302 LTL--VIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK 359
TL + K P E ++ R++ M ++ + ++ +++V V G H+ GIK
Sbjct: 228 KTLKEIRTIFEKELPFTYEAILLGRERNMVRSIKQ--SKGNTIVTVAGALHIDGIKELLN 285
Query: 360 QPV 362
P+
Sbjct: 286 LPL 288
>gi|440899054|gb|ELR50425.1| TraB domain-containing protein, partial [Bos grunniens mutus]
Length = 258
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 93/219 (42%), Gaps = 44/219 (20%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP +V L AE G+ VY+VGTAH S +S R+V I ++P VV +ELC RVSM
Sbjct: 60 LPHTVTELV----AEDGS-RVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSM 114
Query: 185 LTPQNLKVPTVGEMVDM----------------------WKKKHNTFGILYSWFLAKVAS 222
L + + + + W + G +W +
Sbjct: 115 LKMDERTLLREAKEISLEKLQQAIRQVRPSGGPGRPSRRWARARPGAG---AWEPPRGPP 171
Query: 223 HLEIFPGS--EFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQA 280
P S RV F K LGDRP+ +T +R + LW K+KL + F +
Sbjct: 172 PTPQHPTSTQASRVPF-------CKFHLGDRPIPVTFKRAIAALSLWQKVKLAWGLCFLS 224
Query: 281 FFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
+ S +D+ R ++ D+L ++ EM FP L T
Sbjct: 225 DPI-SKDDVERCKQK----DLLEQMMAEMVGEFPDLHRT 258
>gi|313124821|ref|YP_004035085.1| hypothetical protein Hbor_00330 [Halogeometricum borinquense DSM
11551]
gi|448286760|ref|ZP_21477981.1| hypothetical protein C499_08267 [Halogeometricum borinquense DSM
11551]
gi|312291186|gb|ADQ65646.1| uncharacterized PrgY-like protein, pheromone shutdown like protein
[Halogeometricum borinquense DSM 11551]
gi|445573732|gb|ELY28250.1| hypothetical protein C499_08267 [Halogeometricum borinquense DSM
11551]
Length = 556
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 139 EGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN--------L 190
E GT + +VGTAHVS +S REVE++I P VV +EL R LT L
Sbjct: 6 ENGT--IRIVGTAHVSADSVREVESVIRDEHPDVVAVELDEGRYRRLTGDTDDPDPEALL 63
Query: 191 KVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGD 250
+ T ++ W + S+ A++ +I PGSE A E A + G + L D
Sbjct: 64 ESTTSVRLILHW---------VLSYVQAQLGDQFDIEPGSELLKAVETADEIGTDIALVD 114
Query: 251 RPVQITLRRTWEKMPLWHK 269
R +++T++R W +M + K
Sbjct: 115 RDIRVTVQRFWSQMTIREK 133
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQG 353
++ D D++ ++ E + P L+ ERD Y++ L+ + VVAV+G GH G
Sbjct: 288 ADLTDTDVVQTMLTEFRELCPNGARALIDERDAYIAYQLVALRDSGLDVVAVLGAGHRGG 347
Query: 354 IKNYWKQP--VPVHDLMTIPSPKPAVSALKVLSSLGVAVAGVA 394
++ Y P +P H + S P+V K+ +L ++VA VA
Sbjct: 348 VEQYLSNPATLPPHGTLVGTSRGPSVPVKKIAGAL-ISVAFVA 389
>gi|448364852|ref|ZP_21553428.1| TraB determinant protein [Natrialba aegyptia DSM 13077]
gi|445657485|gb|ELZ10312.1| TraB determinant protein [Natrialba aegyptia DSM 13077]
Length = 596
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
+LP V D++ +G V ++GTAHVS+ S +V + +P VV +EL R +
Sbjct: 11 DLPDPVAAGETDTSQDG---SVTVLGTAHVSQASVDDVRDAVAEEQPDVVAVELDEGRYN 67
Query: 184 MLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEA 239
+ P E D+ + F L W L+ V S L +I PG++ R A + A
Sbjct: 68 QMQG---GAPDDIESQDLLSG-NTVFQFLAYWMLSYVQSRLGDQFDIEPGADMRAAIDAA 123
Query: 240 MKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLL 273
+ G V L DR +Q+T++R W + K+K++
Sbjct: 124 ERNGSGVSLVDRDIQVTIQRFWNGLSFTEKLKMV 157
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
M D D+++ +++E + P L+ ERD Y++ L + V+AVVG GH GI+
Sbjct: 331 MTDGDVVSAMMEEFRQFSPRGANALIDERDAYIAHNLHTLREHGYDVLAVVGAGHRAGIE 390
Query: 356 NYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
Y + P +P + +T + S LK+L L
Sbjct: 391 RYLEHPDELPPMESITGTASSRRFSPLKILGYL 423
>gi|254168687|ref|ZP_04875529.1| TraB family [Aciduliprofundum boonei T469]
gi|289596809|ref|YP_003483505.1| TraB determinant protein [Aciduliprofundum boonei T469]
gi|197622313|gb|EDY34886.1| TraB family [Aciduliprofundum boonei T469]
gi|289534596|gb|ADD08943.1| TraB determinant protein [Aciduliprofundum boonei T469]
Length = 221
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPT-VGEMVDMW 202
+ LVG AHV +E +I P +V +EL R V++ T Q ++P +M +M
Sbjct: 2 IILVGVAHVIDLKVH-IERLILEENPDIVAVELDYGRYVALTTKQQGEMPYFYRKMAEMQ 60
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K + G +V GSE A A +V D Q ++ +
Sbjct: 61 KNLADMLG-------GEV--------GSEMVTAVRTAQIMNKQVAFIDMDSQQIIKSVKK 105
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDV-DMLTLVIQEMSKAFPTLMETLV 321
M LW K+K+ S +F + + + KE++ + D I+EM K +P L + L
Sbjct: 106 NMSLWEKVKMYGSLIFAPLV---GKKMGK--KEVESIIDQEDKYIKEMKKKYPGLSKALF 160
Query: 322 HERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
+R+++M++ L ++ E ++A VG GHL+G+K
Sbjct: 161 DDREEFMANNLKRLDGEDIKILAFVGDGHLEGLK 194
>gi|302798025|ref|XP_002980773.1| hypothetical protein SELMODRAFT_420341 [Selaginella moellendorffii]
gi|300151779|gb|EFJ18424.1| hypothetical protein SELMODRAFT_420341 [Selaginella moellendorffii]
Length = 270
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 31/229 (13%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNLKVPTVGEMVDMW 202
+V+L+GT H+S+ S +V+ + ELC SR+ +L P ++ +
Sbjct: 35 EVHLIGTMHISQRSADKVQQV-----------ELCPSRMDCLLEPDGGDDEPRRGVIREF 83
Query: 203 KKKHNTFG------ILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT 256
TFG +L+ ++ + I SEF VA EAMK G ++ L D ++T
Sbjct: 84 LDCPGTFGERLLHVVLHFYY--QGVRDAGIATASEFVVAGTEAMKLGAEIHLIDENSKVT 141
Query: 257 LRRTWEKMPL---WHKIKLLYSFLFQAFFLPSAEDLNR---MLKEMDDVDMLTLVIQEMS 310
R + + + I+ L++ L + + NR +L+ M+ ++ + +I+++
Sbjct: 142 KERLNRALTMPVAFRLIRKLWTMKECQVMLHAIQ--NRKLSLLESMNTREIASSLIRDLR 199
Query: 311 KAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK 359
FP +++ +V +RD+ M+ LL +VAVVG H+ GI++ W
Sbjct: 200 LEFPEVVDAVVDQRDEIMTKRLLCC---DGKIVAVVGLAHMDGIEDRWN 245
>gi|328871710|gb|EGG20080.1| hypothetical protein DFA_07197 [Dictyostelium fasciculatum]
Length = 314
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 17/131 (12%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML-TPQNLK---------VP 193
+++++GT+HVSK S +V+ I +P V LELC SR L QN+K
Sbjct: 57 EIFIIGTSHVSKRSAYQVKNFIADTQPSTVVLELCQSRYDKLKAEQNVKNIQPYQQQQQQ 116
Query: 194 TVG----EMVDMWKKKHNTFGILYSWFLAKVASHLE---IFPGSEFRVAFEEAMKYGGKV 246
++G +++ M G L+ L+ + I PG EF+ A EA + G +
Sbjct: 117 SMGTLLQQILKMLSSGRMDPGQLFQMVLSNFYNQFRLMGIIPGLEFKFAINEADRIGANI 176
Query: 247 ILGDRPVQITL 257
+LGD PV T+
Sbjct: 177 VLGDSPVNQTM 187
>gi|448351801|ref|ZP_21540595.1| TraB determinant protein [Natrialba taiwanensis DSM 12281]
gi|445632361|gb|ELY85573.1| TraB determinant protein [Natrialba taiwanensis DSM 12281]
Length = 596
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 134 CDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNL 190
D++ +G V ++GTAHVS+ S EV + +P VV +EL R + + TP ++
Sbjct: 21 TDTSQDG---SVTVLGTAHVSQASVDEVRDAVAEEQPDVVAVELDEGRYNQMQGGTPDDI 77
Query: 191 KVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKV 246
E D+ + F L W L+ V S L +I PG++ R A + A + G V
Sbjct: 78 ------ESQDL-LSGNTVFQFLAYWMLSYVQSRLGDQFDIEPGADMRAAIDAAERNGSGV 130
Query: 247 ILGDRPVQITLRRTWEKMPLWHKIKLL 273
L DR +Q+T++R W + K+K++
Sbjct: 131 SLVDRDIQVTIQRFWNGLSFTEKLKMV 157
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
M D D+++ +++E + P L+ ERD Y++ L + V+AVVG GH GI+
Sbjct: 331 MTDGDVVSAMMEEFRQFSPRGANALIDERDAYIAHNLQTLREHGYDVLAVVGAGHRAGIE 390
Query: 356 NYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
Y + P +P + +T + S LK+L L
Sbjct: 391 RYLEHPDELPPMESITGTASSRRFSPLKILGYL 423
>gi|433676299|ref|ZP_20508431.1| putative protein MJ1365 [Xanthomonas translucens pv. translucens
DSM 18974]
gi|430818600|emb|CCP38713.1| putative protein MJ1365 [Xanthomonas translucens pv. translucens
DSM 18974]
Length = 431
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 25/234 (10%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S VE ID + V +EL R+ LT P L + +++ +
Sbjct: 34 LLGTAHVSLTSVAAVERAIDSGRFDAVAVELDPQRLQALTDPDALTKLDLVQVIRKGRVA 93
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A + V L DR V +T +R ++
Sbjct: 94 LFAANLALAAYQRRLAEQLGIEPGAELKRAVLLARERQLPVYLIDREVGLTFKRASGRLG 153
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
L+ K+KL L F S E ++++ DML + + P L +T++ ERD
Sbjct: 154 LFGKLKLGSGLLGGLF--ASDEVGEAEIEKLKQGDMLEASFGDFASESPALYDTIIAERD 211
Query: 326 QYMSSTLLKVATEHSS----------------------VVAVVGKGHLQGIKNY 357
+YM++ L + + ++ V+AVVG GHL G+ +
Sbjct: 212 RYMATRLREEHAQRTAPSQTSIAPPDYLETARADGIRDVLAVVGAGHLAGLARH 265
>gi|328866592|gb|EGG14976.1| hypothetical protein DFA_10850 [Dictyostelium fasciculatum]
Length = 579
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 36/261 (13%)
Query: 135 DSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML--------- 185
D G +YLVGT+H+ ES VE +ID +KP + +EL R +L
Sbjct: 30 DKDESGSDTTIYLVGTSHLFNESSELVEHVIDVVKPSHILIELSHERKPLLQLPESTIRS 89
Query: 186 --TPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYG 243
TP + + + + Y+++ ++ + PG E R A+ +A
Sbjct: 90 GFTPNKDPISRIPWFTGNLEDITIMLQMTYTYYCFRLLDR-PVIPGWEMRAAWSKAKANN 148
Query: 244 GKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSA------EDLNRMLKE-- 295
V+LGDR T+ R + + L + + L E+LN +++
Sbjct: 149 IPVLLGDRDSGATVDRMLHSLSFSTLLSLSLKSVVGMWRLSQMSPQEIRENLNSQIEQSL 208
Query: 296 -MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTL----------LKVATEHSS--- 341
+ + QE+ ++ P + + L+ ERD+Y++S L LK +
Sbjct: 209 HYGSENEKVMYGQELLESLPQVSKILIEERDRYLASNLRELRDLRDTSLKFTQSDGTKKK 268
Query: 342 --VVAVVGKGHLQGIKNYWKQ 360
+V+V G HL GI+ ++K+
Sbjct: 269 QVIVSVTGLAHLNGIERFYKE 289
>gi|440731392|ref|ZP_20911415.1| trab family membrane protein [Xanthomonas translucens DAR61454]
gi|440373257|gb|ELQ10021.1| trab family membrane protein [Xanthomonas translucens DAR61454]
Length = 427
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 25/234 (10%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S VE ID + V +EL R+ LT P L + +++ +
Sbjct: 30 LLGTAHVSLTSVAAVERAIDSGRFDAVAVELDPQRLQALTDPDALTKLDLVQVIRKGRVA 89
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A + V L DR V +T +R ++
Sbjct: 90 LFAANLALAAYQRRLAEQLGIEPGAELKRAVLLARERQLPVYLIDREVGLTFKRASGRLG 149
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
L+ K+KL L F S E ++++ DML + + P L +T++ ERD
Sbjct: 150 LFGKLKLGSGLLGGLF--ASDEVGEAEIEKLKQGDMLEASFGDFASESPALYDTIIAERD 207
Query: 326 QYMSSTLLKVATEHSS----------------------VVAVVGKGHLQGIKNY 357
+YM++ L + + ++ V+AVVG GHL G+ +
Sbjct: 208 RYMATRLREEHAQRTAPSQTSIATPDYLETARADGIRNVLAVVGAGHLAGLARH 261
>gi|254168836|ref|ZP_04875677.1| TraB family [Aciduliprofundum boonei T469]
gi|197622273|gb|EDY34847.1| TraB family [Aciduliprofundum boonei T469]
Length = 221
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR-VSMLTPQNLKVPT-VGEMVDMW 202
+ LVG AHV +E +I P +V +EL R V++ T Q ++P +M +M
Sbjct: 2 IILVGVAHVIDLKV-HIERLIMEEDPDIVAVELDYGRYVALTTKQQGEMPYFYRKMAEMQ 60
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
K + G +V GSE A A +V D Q ++ +
Sbjct: 61 KNLADMLG-------GEV--------GSEMVTAVRTAQIMNKQVAFIDMDSQQIIKSVKK 105
Query: 263 KMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDV-DMLTLVIQEMSKAFPTLMETLV 321
M LW K+K+ S +F + + + KE++ + D I+EM K +P L + L
Sbjct: 106 NMSLWEKVKMYGSLIFAPLV---GKKMGK--KEVESIIDQEDRYIKEMKKKYPGLSKALF 160
Query: 322 HERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKN 356
+R+++M++ L + E ++A VG GHL+G+K
Sbjct: 161 DDREKFMANNLKHLDREDIKILAFVGDGHLEGLKK 195
>gi|219125181|ref|XP_002182865.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405659|gb|EEC45601.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 431
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 22/157 (14%)
Query: 228 PGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLL--YSFLFQAF---- 281
PG EF VA E + G ++LGD+ V++TLRR + + KLL S L +
Sbjct: 271 PGEEFVVAVREGQRIGADIVLGDQDVEVTLRRMTQALAQTDLNKLLDPDSELERGMRELM 330
Query: 282 -----FLPSAED-----LNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSST 331
L S+ D L+ ++ M D + ++ ++ K P L++ ++ ERD YM++
Sbjct: 331 GDSDPSLASSPDAFKSELSTYVENMKTRDSVRKIMAQLQKVAPALVQVMLTERDAYMAAG 390
Query: 332 LLKVATEHSSVVAVVGKGHLQGIKNY-----WKQPVP 363
L + + AV+G H+ G++ WKQ P
Sbjct: 391 -LDTLNQFEVITAVMGIAHMDGVERNLQSQGWKQMRP 426
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 133 TCDSTA---EGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT 186
TCD+T + G VY++GTAH+S+ S ++ + P VF+EL RVS +T
Sbjct: 102 TCDTTVSVWQRGDRIVYILGTAHISEISSDLAGQLVKDVHPSAVFVELDLKRVSGVT 158
>gi|424794328|ref|ZP_18220312.1| Putative TraB family membrane protein [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422796019|gb|EKU24608.1| Putative TraB family membrane protein [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 431
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAHVS S VE ID + V +EL R+ LT P L + +++ +
Sbjct: 34 LLGTAHVSLASVAAVERAIDSGRFDAVAVELDPQRLQALTDPDALTKLDLVQVIRKGRVA 93
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
+ + + ++A L I PG+E + A A + V L DR V +T +R ++
Sbjct: 94 LFAANLALAAYQRRLAEQLGIEPGAELKRAVLLARERQLPVYLIDREVGLTFKRASGRLG 153
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
L+ K+KL L F S E ++++ DML + + P L +T++ ERD
Sbjct: 154 LFGKLKLGSGLLGGLF--ASDEVGEAEIEKLKQGDMLEASFGDFASESPALYDTIIAERD 211
Query: 326 QYMSSTLLKVATEHSS----------------------VVAVVGKGHLQGIKNY 357
YM++ L + + + V+AVVG GHL G+ +
Sbjct: 212 HYMATRLREEHAQRRAPSQTPIAAPDYLETARAGGIRDVLAVVGAGHLAGLARH 265
>gi|390960642|ref|YP_006424476.1| signaling protein, TraB family [Thermococcus sp. CL1]
gi|390518950|gb|AFL94682.1| signaling protein, TraB family [Thermococcus sp. CL1]
Length = 233
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 29/224 (12%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V L+GT HVS +S EV I +P V +EL +R + + + T+ E + ++
Sbjct: 7 VKLIGTMHVSPKSREEVIRTILNERPHAVAIELDRARFLAMNEE--RRLTLEESLRFGRR 64
Query: 205 KHNTFGILYSWFLAKVASHL-EIF---PGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
L ++ LAKV L E F PG E + A A G + L D + + L +
Sbjct: 65 G------LINYVLAKVEEKLGEEFGMAPGEEMKAAVNAAQALGVPLYLIDEDINVILSKI 118
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLP-SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
+ + KLL FLP A DL D ++ L++ + + +P L
Sbjct: 119 ---AAVPGREKLLMGLEVLGVFLPVKAGDLG------DPMEEYRLMMVQFKRRYPYLYRV 169
Query: 320 LVHERDQYMSSTLLKV-------ATEHSSVVAVVGKGHLQGIKN 356
LV ER++ M+ L+ + + VVAVVG GH QGI++
Sbjct: 170 LVEERNEVMARNLISIVENLKLQGVKRPKVVAVVGLGHKQGIEH 213
>gi|452823411|gb|EME30422.1| TraB family protein [Galdieria sulphuraria]
Length = 180
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 16/140 (11%)
Query: 228 PGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAE 287
PG EF A +EA + +V+ GDR + T++R ++ S L Q F L + E
Sbjct: 32 PGLEFLAAVDEAQRIRAQVVYGDRHFKDTIKRVGRELEGKR-----LSLLRQLFHLEAPE 86
Query: 288 ---------DLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATE 338
L ++++ D + L++Q M KA P L + L+ ERD Y+S L +
Sbjct: 87 VEHIFKDTGGLQGSVEKLLDRRNVQLLVQFMRKAVPPLAQVLLDERDLYLSRAL--KSQP 144
Query: 339 HSSVVAVVGKGHLQGIKNYW 358
VV VVG HL+GI+ W
Sbjct: 145 GPQVVGVVGMAHLEGIERNW 164
>gi|448362554|ref|ZP_21551160.1| TraB determinant protein [Natrialba asiatica DSM 12278]
gi|445648034|gb|ELZ00998.1| TraB determinant protein [Natrialba asiatica DSM 12278]
Length = 596
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
Query: 134 CDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVP 193
D++ +G V ++GTAHVS+ S +V + +P VV +EL R + + P
Sbjct: 21 TDTSQDG---SVTVLGTAHVSQASVDDVRDAVAEEQPDVVAVELDEGRYNQMQG---GAP 74
Query: 194 TVGEMVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILG 249
E D+ + F L W L+ V S L +I PG++ R A + A + G V L
Sbjct: 75 DDIESQDL-LSGNTVFQFLAYWMLSYVQSRLGDQFDIEPGADMRAAIDAAERNGSGVSLV 133
Query: 250 DRPVQITLRRTWEKMPLWHKIKLL 273
DR +Q+T++R W + K+K++
Sbjct: 134 DRDIQVTIQRFWNGLSFTEKLKMV 157
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
M D D+++ +++E + P L+ ERD Y++ L + V+AVVG GH GI+
Sbjct: 331 MTDGDVVSAMMEEFRQFSPRGANALIDERDAYIAHNLQTLREHGYDVLAVVGAGHRAGIE 390
Query: 356 NYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
Y + P +P + +T + S LK+L L
Sbjct: 391 RYLEHPDELPPMESITGTASSRRFSPLKILGYL 423
>gi|307110025|gb|EFN58262.1| hypothetical protein CHLNCDRAFT_57092 [Chlorella variabilis]
Length = 685
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 117 TKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLE 176
T LP L + +L TAEG T Y++G +HVSKESCRE+E +I ++P +V LE
Sbjct: 66 TAAELPPSLRNTTAVL---QTAEGATA--YVLGISHVSKESCREIEQLIRLVRPDIVLLE 120
Query: 177 LCSSRVSML 185
LC R +L
Sbjct: 121 LCKDRTGLL 129
>gi|302755136|ref|XP_002960992.1| hypothetical protein SELMODRAFT_437453 [Selaginella moellendorffii]
gi|300171931|gb|EFJ38531.1| hypothetical protein SELMODRAFT_437453 [Selaginella moellendorffii]
Length = 213
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V LVGTAHVS+ S ++VE I ++P V +ELC SR+ ++ + + +
Sbjct: 85 VILVGTAHVSQVSAQQVERAIKTIRPDNVVVELCKSRIGIMYLDPSMANSTANFLSLTGT 144
Query: 205 KHN-------TFGILYSWFL--------AKVASHLEIFPGSEFRVAFEEAMKYGGKVILG 249
N G ++FL K++ + G EFR A A + +++LG
Sbjct: 145 DRNAALARSFNLGGRSAFFLRLLLASVSEKISKSAAVPVGEEFRAARRAAKEVEAQLVLG 204
Query: 250 DRPVQITL 257
DRP++IT
Sbjct: 205 DRPIEITF 212
>gi|302767190|ref|XP_002967015.1| hypothetical protein SELMODRAFT_408334 [Selaginella moellendorffii]
gi|300165006|gb|EFJ31614.1| hypothetical protein SELMODRAFT_408334 [Selaginella moellendorffii]
Length = 213
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V LVGTAHVS+ S ++VE I ++P V +ELC SR+ ++ + + +
Sbjct: 85 VILVGTAHVSQVSAQQVERAIKTIRPDNVVVELCKSRIGIMYLDPSMANSTANFLSLTGT 144
Query: 205 KHN-------TFGILYSWFL--------AKVASHLEIFPGSEFRVAFEEAMKYGGKVILG 249
N G ++FL K++ + G EFR A A + +++LG
Sbjct: 145 DRNAALARSFNLGGRSAFFLRLLLASVSEKISKSAAVPVGEEFRAARRAAKEVEAQLVLG 204
Query: 250 DRPVQITL 257
DRP++IT
Sbjct: 205 DRPIEITF 212
>gi|448704401|ref|ZP_21700657.1| TraB determinant protein, partial [Halobiforma nitratireducens JCM
10879]
gi|445796334|gb|EMA46843.1| TraB determinant protein, partial [Halobiforma nitratireducens JCM
10879]
Length = 563
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 14/131 (10%)
Query: 150 TAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMVDMWKKKH 206
TAHVS+ S EV +D +P +V +EL R + TP +L+ + +
Sbjct: 1 TAHVSQASVDEVHETVDREQPDIVAVELDEGRYRQMQGGTPDDLEAEDL-------LSGN 53
Query: 207 NTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
F L W L+ V S L ++ PG++ + A E A + + L DR +Q+T++R W
Sbjct: 54 TVFQFLAYWMLSYVQSRLGDQFDVEPGADMQAAIEAAERNESGIALVDRDIQVTIQRFWS 113
Query: 263 KMPLWHKIKLL 273
++ + K+K++
Sbjct: 114 RLSVTEKLKMV 124
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
M D D++ +++E + P L+ ERD Y++ L ++ + V+AVVG GH GI+
Sbjct: 297 MTDGDVVGAMMEEFRQFSPRGANALIDERDAYIAHNLHQLRQQGYDVLAVVGAGHRAGIE 356
Query: 356 NYWKQP--VPVHDLMTIPSPKPAVSALKVLSSL 386
+Y P +P + +T + S LK+ L
Sbjct: 357 HYLANPDELPPMESLTGTASGRRFSPLKIFGYL 389
>gi|294890519|ref|XP_002773194.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239878218|gb|EER05010.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 188
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
Query: 224 LEIFPGSEFRVAFEEAMKYGGKVILGDRPVQIT-------LRRTWEKMPLWHKIKLLYSF 276
+ I PG+EF+ A E A + G KVI GD + +T L++ W++M ++ L
Sbjct: 50 MGIEPGAEFKNAVEAAEEIGAKVIAGDVDITLTMEGLTRALQQDWQQMMACREL-LDLDI 108
Query: 277 LFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA 336
FL +AE L K + M K P + E ++ +RD+ M+ L +
Sbjct: 109 DHSRGFLDTAEQLKSREKA-------AQINAAMRKCAPHVYEVMIEDRDRTMAGYLCR-- 159
Query: 337 TEHSSVVAVVGKGHLQGIKNYW 358
+ H +V VVG GH GI+ W
Sbjct: 160 SSHQKMVGVVGMGHCAGIEKAW 181
>gi|302767192|ref|XP_002967016.1| hypothetical protein SELMODRAFT_408337 [Selaginella moellendorffii]
gi|300165007|gb|EFJ31615.1| hypothetical protein SELMODRAFT_408337 [Selaginella moellendorffii]
Length = 168
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V LVGTAHVS+ S ++VE I ++P V +ELC SR+ ++ + + +
Sbjct: 40 VILVGTAHVSQVSAQQVERAIKTIRPDNVVVELCKSRIGIMYLDPSMANSTANFLSLTGT 99
Query: 205 KHN-------TFGILYSWFL--------AKVASHLEIFPGSEFRVAFEEAMKYGGKVILG 249
N G ++FL K++ + G EFR A A + +++LG
Sbjct: 100 DRNAALARSFNLGGRSAFFLRLLLASVSEKISKSAAVPVGEEFRAARRAAKEVEAQLVLG 159
Query: 250 DRPVQITL 257
DRP++IT
Sbjct: 160 DRPIEITF 167
>gi|433422423|ref|ZP_20405983.1| TraB family protein [Haloferax sp. BAB2207]
gi|448570975|ref|ZP_21639486.1| TraB family protein [Haloferax lucentense DSM 14919]
gi|448595871|ref|ZP_21653318.1| TraB family protein [Haloferax alexandrinus JCM 10717]
gi|432198651|gb|ELK54911.1| TraB family protein [Haloferax sp. BAB2207]
gi|445722893|gb|ELZ74544.1| TraB family protein [Haloferax lucentense DSM 14919]
gi|445742325|gb|ELZ93820.1| TraB family protein [Haloferax alexandrinus JCM 10717]
Length = 561
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V +VGTAHVS +S REVE + +P VV +EL R L TP +++ +
Sbjct: 7 GEGHVRVVGTAHVSADSVREVEETVREERPDVVAVELDEGRYRQLKGGTPDDIEARDL-- 64
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F + W L+ V S + ++ PG++ A E A + G V L DR +
Sbjct: 65 -----LRGNTVFQFIAYWMLSYVQSRMGDKFDVKPGADMLAAVETAEEEGLDVALVDRDI 119
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLF 278
Q+T++R W++M K+++ LF
Sbjct: 120 QVTIQRFWQRMGTLEKMRMAGDLLF 144
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
+ E+ D D+++ +++E + P E L+ ERD Y++ L+ + VVAVVG GH +
Sbjct: 293 MAELTDGDVVSAMMEEFRRFSPGGAEALIDERDAYIAHQLVALRQSGRHVVAVVGAGHRE 352
Query: 353 GIKNYWKQP 361
GI+NY + P
Sbjct: 353 GIENYLEHP 361
>gi|302818813|ref|XP_002991079.1| hypothetical protein SELMODRAFT_448263 [Selaginella moellendorffii]
gi|300141173|gb|EFJ07887.1| hypothetical protein SELMODRAFT_448263 [Selaginella moellendorffii]
Length = 275
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 40/236 (16%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS-MLTPQNL----KVPTVGEM 198
+V+L+GT H+S+ S +V+ + ELC SR+ +L P + + E
Sbjct: 35 EVHLIGTMHISQRSADKVQQV-----------ELCPSRMDCLLEPDGGDDGPRRGVIREF 83
Query: 199 VDMWKKKHNTFG------ILYSWFLAKVASHLEIFPGSEF-----RVAFEEAMKYGGKVI 247
+D TFG +L+ ++ + I SEF +VA EAMK G ++
Sbjct: 84 LDC----PGTFGERLLHVVLHFYY--QGVRDAGIATASEFVVCILKVAGTEAMKLGAEIH 137
Query: 248 LGDRPVQITLRRTWEKMPL---WHKIKLLYSFLFQAFFLPSAEDLN-RMLKEMDDVDMLT 303
L D ++T R + + + I+ L++ L + ++ N L+ M+ ++ +
Sbjct: 138 LIDENSKVTKERLNRALTMPVAFRLIRKLWTMKECQVMLHAIQNRNLSFLESMNTREIAS 197
Query: 304 LVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK 359
+I+++ FP +++ +V +RD+ M+ LL +VAVVG H+ GI+ W
Sbjct: 198 SLIRDLRLEFPEVVDAVVDQRDEIMTKRLLCC---DGKIVAVVGLAHMDGIEERWN 250
>gi|292655704|ref|YP_003535601.1| TraB family protein [Haloferax volcanii DS2]
gi|448289688|ref|ZP_21480852.1| TraB family protein [Haloferax volcanii DS2]
gi|291372552|gb|ADE04779.1| TraB family protein [Haloferax volcanii DS2]
gi|445581421|gb|ELY35779.1| TraB family protein [Haloferax volcanii DS2]
Length = 561
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V +VGTAHVS +S REVE + +P VV +EL R L TP +++ +
Sbjct: 7 GEGHVRVVGTAHVSADSVREVEETVREERPDVVAVELDEGRYRQLKGGTPDDIEARDL-- 64
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F + W L+ V S + ++ PG++ A E A + G V L DR +
Sbjct: 65 -----LRGNTVFQFIAYWMLSYVQSRMGDQFDVKPGADMLAAVETAEEEGLDVALVDRDI 119
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLF 278
Q+T++R W++M K+++ LF
Sbjct: 120 QVTIQRFWQRMGTLEKMRMAGDLLF 144
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
+ E+ D D+++ +++E + P E L+ ERD Y++ L+ + VVA+VG GH +
Sbjct: 293 MAELTDGDVVSAMMEEFRRFSPGGAEALIDERDAYIAHQLVALRRSGRHVVAIVGAGHRE 352
Query: 353 GIKNYWKQP 361
GI+NY P
Sbjct: 353 GIENYLAHP 361
>gi|354611431|ref|ZP_09029387.1| TraB family protein [Halobacterium sp. DL1]
gi|353196251|gb|EHB61753.1| TraB family protein [Halobacterium sp. DL1]
Length = 501
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 17/145 (11%)
Query: 136 STAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKV 192
+T EG V +VGTAHVS +S EVE +++ P VV +EL R + P++L
Sbjct: 7 ATQEG---SVRVVGTAHVSADSVEEVERVVEEENPDVVAVELDEGRFRQMQGEAPEDLDA 63
Query: 193 PTVGEMVDMWKKKHNTFGILYSWFLAKVASHLE----IFPGSEFRVAFEEAMKYGGKVIL 248
+ K F L W L+ V L I PG++ + A + A + G V L
Sbjct: 64 SDL-------LKGSMAFQFLAYWLLSYVQKRLGDRFGIEPGADMKAAVDAAERSGADVAL 116
Query: 249 GDRPVQITLRRTWEKMPLWHKIKLL 273
DR +Q+T++R W +M + K++L+
Sbjct: 117 VDRDIQVTIQRFWARMSSFEKLRLV 141
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 287 EDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAV 345
ED+ ++++ D D+++ +++E + P E L+ ERD Y++ +L+ + + VVAV
Sbjct: 227 EDVEEFSMEDLTDADVVSAMMEEFRRFSPEGAEALIDERDAYIAHSLVALREQGKHVVAV 286
Query: 346 VGKGHLQGIKNYWKQP 361
VG GH +GI+ Y + P
Sbjct: 287 VGAGHREGIERYLENP 302
>gi|71276217|ref|ZP_00652496.1| Pheromone shutdown protein [Xylella fastidiosa Dixon]
gi|170730709|ref|YP_001776142.1| pheromone shutdown protein [Xylella fastidiosa M12]
gi|71162978|gb|EAO12701.1| Pheromone shutdown protein [Xylella fastidiosa Dixon]
gi|71731509|gb|EAO33571.1| Pheromone shutdown protein [Xylella fastidiosa Ann-1]
gi|167965502|gb|ACA12512.1| pheromone shutdown protein [Xylella fastidiosa M12]
Length = 405
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 4/213 (1%)
Query: 147 LVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVPTVGEMVDMWKKK 205
L+GTAH+S+ S V+ ++ + +EL + R+ L P L + +++ +
Sbjct: 29 LLGTAHISQASVAAVKQEVESGCYDAIAVELDAQRLQALCDPDTLAKLDLIQVIRKGQLA 88
Query: 206 HNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMP 265
T + + + ++A L I PG+E + A A + V L DR V +T +R K+
Sbjct: 89 LFTANLALAAYQRRLAKQLGIEPGAELKTAVTMARERDLPVHLIDREVGLTFKRASAKLG 148
Query: 266 LWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERD 325
K+KL + A + E ++++ DML + + P L +T++ ERD
Sbjct: 149 FLGKLKLGGGLI--AGLFAADEVGEEEIEKLKQGDMLEASFGDFASESPELYQTIIAERD 206
Query: 326 QYMSSTLL-KVATEHSSVVAVVGKGHLQGIKNY 357
+YM++ L +V + V+ VVG GHL G+ +
Sbjct: 207 RYMATRLREEVNSTTRKVLVVVGAGHLTGLAKH 239
>gi|448624655|ref|ZP_21670603.1| TraB family protein [Haloferax denitrificans ATCC 35960]
gi|445749860|gb|EMA01302.1| TraB family protein [Haloferax denitrificans ATCC 35960]
Length = 559
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V +VGTAHVS +S REVE + +P VV +EL R L TP +++ +
Sbjct: 7 GEGHVRVVGTAHVSADSVREVEETVREERPDVVAVELDEGRYRQLKGGTPDDIEARDL-- 64
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F + W L+ V S + ++ PG++ A E A + G V L DR +
Sbjct: 65 -----LRGNTVFQFIAYWMLSYVQSRMGDKFDVKPGADMLAAVETAEEEGLDVALVDRDI 119
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLF 278
Q+T++R W +M K+++ LF
Sbjct: 120 QVTIQRFWRRMGTLEKMRMAGDLLF 144
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
+ E+ D D+++ +++E + P E L+ ERD Y++ L+ + VVAVVG GH +
Sbjct: 291 MAELTDGDVVSAMMEEFRRFSPGGAEALIDERDAYIAHQLVALRQSGRHVVAVVGAGHRE 350
Query: 353 GIKNYWKQP 361
GI+ Y + P
Sbjct: 351 GIERYLEHP 359
>gi|448603040|ref|ZP_21656861.1| TraB family protein [Haloferax sulfurifontis ATCC BAA-897]
gi|445746236|gb|ELZ97698.1| TraB family protein [Haloferax sulfurifontis ATCC BAA-897]
Length = 559
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 14/145 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V +VGTAHVS +S REVE + +P VV +EL R L TP +++ +
Sbjct: 7 GEGHVRVVGTAHVSADSVREVEETVREERPDVVAVELDEGRYRQLKGGTPDDIEARDL-- 64
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F + W L+ V S + ++ PG++ A E A G V L DR +
Sbjct: 65 -----LRGNTVFQFIAYWMLSYVQSRMGDKFDVKPGADMLAAVETAEDEGLDVALVDRDI 119
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLF 278
Q+T++R W +M K+++ LF
Sbjct: 120 QVTIQRFWRRMGTLEKMRMAGDLLF 144
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
+ E+ D D+++ +++E + P E L+ ERD Y++ L+ + VVAVVG GH +
Sbjct: 291 MAELTDGDVVSAMMEEFRRFSPGGAEALIDERDAYIAHQLVALRQSGRHVVAVVGAGHRE 350
Query: 353 GIKNYWKQP 361
GI+NY + P
Sbjct: 351 GIENYLEHP 359
>gi|223477196|ref|YP_002581724.1| Pheromone shutdown protein [Thermococcus sp. AM4]
gi|214032422|gb|EEB73252.1| Pheromone shutdown protein [Thermococcus sp. AM4]
Length = 237
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 37/234 (15%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V L+GT HVS S EV I+ ++P + +EL R L G+ D K
Sbjct: 7 VKLIGTMHVSPRSREEVWREIEKIRPNAIAVELDPLRFQGLLS--------GKKADF--K 56
Query: 205 KHNTFG------ILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLR 258
+ T G L + F ++ + PG E A E A G ++L D +++ +
Sbjct: 57 ESLTLGRAGIVSYLLTKFEERLGEEFGMAPGGEMLAAIESARLLGVPIVLIDEDIRVIMG 116
Query: 259 RTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTL---VIQEMSKAFPT 315
+ + P + KLL + FF+P + + + D D++ +++E +P
Sbjct: 117 KILQA-PF--REKLLLALEGSLFFIPGLGE-----EAIADSDVMASYEDMMREFRLRYPY 168
Query: 316 LMETLVHERDQYMSSTLLKV-------ATEHSSVVAVVGKGHLQGIK---NYWK 359
L LV ER++ M+ L + + +VAVVG GH +GI+ N WK
Sbjct: 169 LYRVLVEERNEIMAMNLRRAVDDMLLRGVKKPKIVAVVGMGHKKGIERILNSWK 222
>gi|307109593|gb|EFN57831.1| hypothetical protein CHLNCDRAFT_143259 [Chlorella variabilis]
Length = 485
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 15/125 (12%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
VY+VGTAHVS+++ ++V A+I + P VV LEL R L Q K T G + + K
Sbjct: 25 VYVVGTAHVSRKAAQDVSALISRVSPAVVVLELDPERERKLLEQAEKGDTYG-ITRLRNK 83
Query: 205 ------KHNTFGILYSWFLAKV----ASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQ 254
K + G + +F++ + + + PG EF A E A V+LGDR +
Sbjct: 84 STLEIVKMSLSGEAFQFFMSSIYTITGALMGTTPGGEFLAAIEAAR----GVVLGDRDQE 139
Query: 255 ITLRR 259
T+RR
Sbjct: 140 ATMRR 144
>gi|448383972|ref|ZP_21562970.1| TraB family protein [Haloterrigena thermotolerans DSM 11522]
gi|445658961|gb|ELZ11773.1| TraB family protein [Haloterrigena thermotolerans DSM 11522]
Length = 252
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 5/215 (2%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V LV + H S CR V I ++P +V +EL SR L + P + E+
Sbjct: 7 VTLVPSVHFSPSHCRRVRERIRAVEPDLVAVELDESRFERLEADS--GPDLAELSRELSP 64
Query: 205 KHNTFGILYSWFLAKVASHLEIFPG-SEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
F V + P ++ A E A + G V L D PV TLR +
Sbjct: 65 PAAAAYGAVRAFQRTVVRLAGLDPDYTDMEAAIETAAERGTDVALIDDPVAETLRELARR 124
Query: 264 M-PLWHKIKLLYS-FLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLV 321
+ PL +L + + ++ L + + E+ D + I + + FP + L+
Sbjct: 125 VGPLTIPRSMLRAQSMGPDAYVDQLALLEQPVAEISHGDDVQPAIDHLRRLFPEVAAVLI 184
Query: 322 HERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKN 356
RD+ M+ L + + VVAVVG GH GI+
Sbjct: 185 DRRDRSMAQRLHALRRDGHDVVAVVGAGHHNGIER 219
>gi|448585480|ref|ZP_21647873.1| TraB family protein [Haloferax gibbonsii ATCC 33959]
gi|445726180|gb|ELZ77797.1| TraB family protein [Haloferax gibbonsii ATCC 33959]
Length = 559
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 14/145 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V +VGTAHVS +S REVE + +P VV +EL R + TP +++ +
Sbjct: 7 GEGHVRVVGTAHVSADSVREVEETVREERPDVVAVELDEGRYRQMKGGTPDDIEARDL-- 64
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F + W L+ V S + ++ PG++ A E A G V L DR +
Sbjct: 65 -----LRGNTVFQFIAYWMLSYVQSRMGDKFDVKPGADMLAAVETAEDEGLDVALVDRDI 119
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLF 278
Q+T++R W +M K+++ LF
Sbjct: 120 QVTIQRFWRRMGTLEKVRMAGDLLF 144
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 280 AFFLPSAEDLNRM---LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA 336
F+P+ D + + E+ D D+++ +++E + P E L+ ERD Y++ L+ +
Sbjct: 275 GLFVPAEGDADYEEFDMAELTDGDVVSAMMEEFRRFSPGGAEALIDERDAYIAHQLVALR 334
Query: 337 TEHSSVVAVVGKGHLQGIKNYWKQP 361
VVA+VG GH +GI+NY P
Sbjct: 335 QSGRHVVAIVGAGHREGIENYLAHP 359
>gi|18977718|ref|NP_579075.1| pheromone shutdown protein [Pyrococcus furiosus DSM 3638]
gi|18893453|gb|AAL81470.1| pheromone shutdown protein [Pyrococcus furiosus DSM 3638]
Length = 289
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 96/225 (42%), Gaps = 37/225 (16%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLEL-------CSSRVSMLTPQNLKVPTVGE 197
V ++GT HVS ES REV I KP + LEL R + PQ LK+ +G
Sbjct: 74 VKIIGTVHVSPESVREVRETIIREKPDAIALELDYPRLLALLRRERLTLPQALKLGKMG- 132
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
FG + PG E A++ A G V L D+PV TL
Sbjct: 133 ----------IFGFILQELEMFFGRSFGESPGEEMIEAYKAAASLGIPVYLIDKPVNETL 182
Query: 258 RRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLM 317
P+ KL + A LP LKE+D + +++E + FP +
Sbjct: 183 AGMLSSPPIE---KLRFGIEVLASLLPGK------LKELD----YSYLMKEFREKFPHMY 229
Query: 318 ETLVHERDQYMSSTLLKVA------TEHSSVVAVVGKGHLQGIKN 356
+ LV ER+ YM+ L+++ + VVAVVG GH +GI+
Sbjct: 230 KVLVEERNLYMAINLMRIVDSLLEKKKKVKVVAVVGLGHKKGIER 274
>gi|308802798|ref|XP_003078712.1| possible signaling protein; TraB (ISS) [Ostreococcus tauri]
gi|116057165|emb|CAL51592.1| possible signaling protein; TraB (ISS) [Ostreococcus tauri]
Length = 486
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGEMV 199
DV ++G+AHVS +S REV +I KP +V +EL R+ L + V
Sbjct: 51 ADVRVIGSAHVSADSAREVRRVITENKPDLVVIELDGDRLKALLRSASEERPAAHAARRV 110
Query: 200 DMWKKKHNTFG------ILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
++ T ++ S A V + L+ PG+EF A E A G V+LGDR
Sbjct: 111 ATPREALRTMMAGEIPLVVGSLGYAVVGAVLDCRPGAEFIAAVESARDVGATVVLGDRSQ 170
Query: 254 QITLRRTWEKM 264
+ T+ R + ++
Sbjct: 171 KATIGRLYARV 181
>gi|312903075|ref|ZP_07762257.1| TraB family protein, partial [Enterococcus faecalis TX0635]
gi|310633577|gb|EFQ16860.1| TraB family protein [Enterococcus faecalis TX0635]
Length = 299
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 214 SWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLL 273
S + K+A+ E A + A + G + L DR +Q+T +R W + K KL
Sbjct: 1 SAYQKKLANTKGTTQAGELIQAIKSAKEIGANIQLIDRDIQVTFKRMWRHLSFLEKPKL- 59
Query: 274 YSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLL 333
F FF + L+E + D V +SK +P+L + ++ +RD+YMS+ L
Sbjct: 60 ----FMTFFTEFDDIEQDKLEEYLESDSFDKVFISLSKKYPSLYQDMITDRDKYMSTKL- 114
Query: 334 KVATEHSSVVAVVGKGHLQGIK 355
V VVGK H++GIK
Sbjct: 115 -KNNSSQVNVVVVGKAHMKGIK 135
>gi|384250566|gb|EIE24045.1| hypothetical protein COCSUDRAFT_62569 [Coccomyxa subellipsoidea
C-169]
Length = 259
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 98/250 (39%), Gaps = 51/250 (20%)
Query: 156 ESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFGI---- 211
+S EV +I +KP V +ELC +R + + ++ G D+ ++ G
Sbjct: 3 QSAEEVRELIRVVKPTSVMVELCEARARRIRG-SAQLQEGGFAKDLVQELLRQLGAGGRD 61
Query: 212 LYSWFLA-------KVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKM 264
L F+ ++ L + PG EF+VA EEA +++ GD T+RR E +
Sbjct: 62 LPQQFVKMGMQGFYRLLKSLGMDPGLEFKVAMEEAELLRARIVFGDADQDRTMRRISESL 121
Query: 265 PLWHK----IKLLYSFLFQAFF-------LPSAEDL-----NRMLKEMDDVDMLTL---- 304
+ L F+ Q LP AE + N K D LTL
Sbjct: 122 TVQAGPSTCNSLTTVFMQQGLLSMVMGGGLPPAEVVDFLRSNGSGKLTDQASFLTLCASK 181
Query: 305 ----------------VIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGK 348
+ + M K P L L ERD+YM + L ++ +V VVG
Sbjct: 182 CCDAVEAMKNRKMARAMTEYMRKVNPELASALTDERDEYMVNCLQQL---EGRIVGVVGL 238
Query: 349 GHLQGIKNYW 358
HL GI+ W
Sbjct: 239 AHLDGIERRW 248
>gi|448562299|ref|ZP_21635338.1| TraB family protein [Haloferax prahovense DSM 18310]
gi|445719503|gb|ELZ71183.1| TraB family protein [Haloferax prahovense DSM 18310]
Length = 559
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 14/145 (9%)
Query: 141 GTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML---TPQNLKVPTVGE 197
G V +VGTAHVS +S REVE + +P VV +EL R + TP +++ +
Sbjct: 7 GEGHVRVVGTAHVSADSVREVEETVREERPDVVAVELDEGRYRQMKGGTPDDIEARDL-- 64
Query: 198 MVDMWKKKHNTFGILYSWFLAKVASHL----EIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
+ + F + W L+ V S + ++ PG++ A E A G V L DR +
Sbjct: 65 -----LRGNTVFQFIAYWMLSYVQSRMGDKFDVKPGADMLAAVETAEDEGLDVALVDRDI 119
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLF 278
Q+T++R W +M K+++ LF
Sbjct: 120 QVTIQRFWRRMGTLEKMRMAGDLLF 144
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 280 AFFLPSAEDLNRM---LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA 336
F P+ D + + E+ D D+++ +++E + P E L+ ERD Y++ L+ +
Sbjct: 275 GLFAPAESDADYEEFDMAELTDGDVVSAMMEEFRRFSPGGAEALIDERDAYIAHQLVALR 334
Query: 337 TEHSSVVAVVGKGHLQGIKNYWKQP 361
VVA+VG GH +GI+NY P
Sbjct: 335 QSGRHVVAIVGAGHREGIENYLAHP 359
>gi|255085000|ref|XP_002504931.1| predicted protein [Micromonas sp. RCC299]
gi|226520200|gb|ACO66189.1| predicted protein [Micromonas sp. RCC299]
Length = 226
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V L+GTAH+SK + E +I +P VV LEL R++ L D +
Sbjct: 54 VTLIGTAHISKAAAEETRELIMRERPDVVVLELDPHRLNALVRDAHTAKPCQAAADRFVS 113
Query: 205 KH-------NTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITL 257
G+ Y+ V + L PG+EF A + A + G +V+LGD V+IT
Sbjct: 114 TSLFRSGPTQAIGLAYTL----VGALLGTTPGAEFLAAIDAAKEVGAEVVLGDLDVKITT 169
Query: 258 RRTWEKM 264
R W++
Sbjct: 170 SRAWKRQ 176
>gi|315231972|ref|YP_004072408.1| pheromone shutdown protein [Thermococcus barophilus MP]
gi|315185000|gb|ADT85185.1| pheromone shutdown protein [Thermococcus barophilus MP]
Length = 221
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 28/224 (12%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWK 203
V ++GT HVS ES V +I KP + +EL R ++ PQ +
Sbjct: 7 VKIIGTMHVSPESRERVRKVILEQKPHAIAIELDRRRFYAIQNPQKMSFEDA-------- 58
Query: 204 KKHNTFGILYSWFLAKVASHL-EIF---PGSEFRVAFEEAMKYGGKVILGDRPVQITLRR 259
K+ GI+ + L KV L E F PG E R A A G + L D + T+
Sbjct: 59 VKYGRKGII-QYVLTKVEEKLGEEFGMSPGGEMREAINLAGLLGIPLYLIDEDIN-TITM 116
Query: 260 TWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
K P K+ L+ L FLP R KE D + +++ + + +P L
Sbjct: 117 KILKAPFREKLLLILESL--TVFLP----FPRKEKERDLIKDFKIMMVQFKRRYPYLYRV 170
Query: 320 LVHERDQYMSSTLLKV-------ATEHSSVVAVVGKGHLQGIKN 356
L+ ER++ M+ L+ + + V+AVVG GH +G++
Sbjct: 171 LLEERNEIMAKNLMAIVDSLKAKGVKKPKVIAVVGLGHKRGVER 214
>gi|440790306|gb|ELR11589.1| TraB subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 263
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 102/232 (43%), Gaps = 28/232 (12%)
Query: 140 GGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMV 199
G + +L+GTAH+SK S +VE LC R + ++ + P
Sbjct: 40 GSGREYWLIGTAHISKRSADQVE--------------LCEGRARRMQEEDGQDPFKQLSA 85
Query: 200 DMWKKKHNTFGILYSWFL-AKVASHLEIF------PGSEFRVAFEEAMKYGGKVILGDRP 252
+ + F + FL A + S +F PG EF+VA EA K V+ GD+
Sbjct: 86 QVSRIFAGPFAGFGAPFLEASLRSFYNVFKLLGFVPGLEFKVAMNEAKKLKIPVVYGDQE 145
Query: 253 VQITLRRTWEKMPLWHKIKL----LYSFLFQAFFLP-SAEDLNRMLKEMDDVDMLTLVIQ 307
T +R L +++ ++ Q+ F A + M++++ + ++ +Q
Sbjct: 146 SSKTFQRLSSVFSLDRLMRINSDAAHNQQMQSLFQQIQANSIEEMVEKLKNRKLVRRFVQ 205
Query: 308 EMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK 359
M +A+P ++ ++ ERD M++ L + + V + HL GI+ ++K
Sbjct: 206 VMKQAYPEVVNVMLTERDVVMAANLRRCPGKVVVGVVGL--AHLDGIEKHFK 255
>gi|405976538|gb|EKC41040.1| TraB domain-containing protein [Crassostrea gigas]
Length = 500
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 121/280 (43%), Gaps = 37/280 (13%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSM 184
LP++ +LT E G+ VYL+GT ++ V II L+P VV L+ SS++
Sbjct: 203 LPKNCEVLT----TEWGS-KVYLLGTNGFCRKCLLNVSKIIQQLRPSVVSLQCSSSKLDE 257
Query: 185 LTPQN---LKVPTVGEM-VDMWKKKHNTFG------ILYSWFLAKVASHLEIFPGSEFRV 234
+ + LK + + +++W FG +LY + + + P ++FR
Sbjct: 258 MKLKEEDALKKLDISPLALNLWVFCMTVFGDGLVAAMLYKQMTLQ-SKQTGLAPDADFRQ 316
Query: 235 AFEEAMKY-GGKVILGDRPVQITLRRTWEKMPLWHKI---KLLYSFLFQAFFLPSAEDLN 290
A+ E K ++ L D P + + RTW L K + LY + P+ E
Sbjct: 317 AYNERKKIPDCRLHLADLPHEAVVYRTWGVPSLREKFTYARRLYQRQKKELKDPTEEHEL 376
Query: 291 RMLKEMDDVDMLTLVIQEMSKAF---PTLMETLVHERDQYMSSTLLKVA----TEHS-SV 342
+ KE + Q M + F P L+ +RD+Y++ +L K A T+ + V
Sbjct: 377 ELDKEHRE--------QAMEREFDSLPAFKRVLIGDRDRYLAYSLKKAAEPTPTDKTPVV 428
Query: 343 VAVVGKGHLQGIKNYWKQ-PVPVHDLMTIPSPKPAVSALK 381
V +V HL GI+ W + V L T+ ALK
Sbjct: 429 VGIVRNEHLDGIRANWNTVDLDVDKLTTVERKYVVYEALK 468
>gi|428179912|gb|EKX48781.1| hypothetical protein GUITHDRAFT_136450 [Guillardia theta CCMP2712]
Length = 200
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 229 GSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPL--WHKIKLLYSFLFQAFFLPSA 286
G EF A EA ++LGDRPV TL R + + W + K A +
Sbjct: 68 GKEFATAISEAKALNANLVLGDRPVNETLIRLQQSIDKTGWSQDK--GDKGDNAAIANTI 125
Query: 287 EDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVV 346
E MLKE V ++Q + + P + L+ ERDQYM+++LLK + VAVV
Sbjct: 126 E----MLKERRTV---RGIMQTLKENLPEVYTALIGERDQYMANSLLKA--NGRTTVAVV 176
Query: 347 GKGHLQGIKNYWKQPVP 363
G H+ GI+ + VP
Sbjct: 177 GMAHMDGIEAHLPGFVP 193
>gi|242398812|ref|YP_002994236.1| signaling protein, TraB family [Thermococcus sibiricus MM 739]
gi|242265205|gb|ACS89887.1| Predicted signaling protein, TraB family [Thermococcus sibiricus MM
739]
Length = 241
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 29/231 (12%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMWK 203
V ++GT HVS +S ++V II +P + +EL R ++ +P+ L E + + K
Sbjct: 15 VKIIGTMHVSPKSRQKVREIILKERPNAIAIELDQQRFYAIQSPKKL---AFQEALKLGK 71
Query: 204 KKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
T+ ++ K+ + PG E + A + G + L D ++I + + K
Sbjct: 72 SALLTYILMKVE--EKIGEEFGMKPGEEMKEAIYMSGLLGVPLYLIDEDIRIIMEKLL-K 128
Query: 264 MPLWHKIKLLYSFLFQAFFL----PSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
P K+ + FL A L PS E+ + D + +++Q+ +P L +
Sbjct: 129 APFREKV---FLFLESALVLLPIAPSREENSE-----DITENYKIMMQQFKTRYPYLFKV 180
Query: 320 LVHERDQYMSSTLLKV-------ATEHSSVVAVVGKGHLQGIK---NYWKQ 360
LV ER++ M+ L K+ + V+AVVG GH +GI+ N +K+
Sbjct: 181 LVEERNEIMARNLKKIVDDLKRMGLKKPKVIAVVGLGHKKGIERILNSYKE 231
>gi|303282781|ref|XP_003060682.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458153|gb|EEH55451.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 582
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
DV+++GTAHVS S V A I +P V +ELC R++ L + L +
Sbjct: 48 ADVHVIGTAHVSGASADHVRAAILAERPDTVVIELCPGRLASLVERALSTRS-----RTA 102
Query: 203 KKKHNTFG-----ILYSWFL--------AKVASHLEIFPGSEFRVAFEEAMKYGGKVILG 249
K TFG ++ F+ A V + + PG+EF A + A G +V+LG
Sbjct: 103 HHKVGTFGDALRVVVSGGFVPTALSVAYACVGAVMGGVPGAEFLAAVDAAKDVGAQVVLG 162
Query: 250 DRPVQITLRRTWEKMPL----WHKIKL 272
D ++ R +M W + KL
Sbjct: 163 DVDERLIFARILSRMTYGDDAWKRWKL 189
>gi|302833301|ref|XP_002948214.1| hypothetical protein VOLCADRAFT_103835 [Volvox carteri f.
nagariensis]
gi|300266434|gb|EFJ50621.1| hypothetical protein VOLCADRAFT_103835 [Volvox carteri f.
nagariensis]
Length = 3230
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 33/178 (18%)
Query: 18 RFFTFITTVKSQIPLRRGPTSLPLSLTKQFSPLLSTRITSFATANDPNFPKMDPNPPESG 77
R F ++ V S++ + PT+L L T +PLL T + A PP +G
Sbjct: 2481 RSFMRVSRVSSKLSVAMDPTAL-LFATPHLAPLLVTNQAFRSGA-----------PPRAG 2528
Query: 78 EEFVHVDPLSESIVSLGDEVRDESSDRDETNGAVPVPEETKKVLPEELPRSVVILTC-DS 136
G + S+ D+++ AVP VLP L +V +L +
Sbjct: 2529 H---------------GVLLCRASAVLDKSSKAVP----ANVVLPPSLRNNVALLEAPNP 2569
Query: 137 TAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT-PQNLKVP 193
T+ GT VYL+ +HVSK S +V +I +KP VV +ELC R +L P++ P
Sbjct: 2570 TSPDGTTRVYLLAMSHVSKRSVEQVGELIRLVKPDVVAVELCKERSGLLVDPEDASKP 2627
>gi|384245308|gb|EIE18803.1| hypothetical protein COCSUDRAFT_59934 [Coccomyxa subellipsoidea
C-169]
Length = 678
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 121 LPE---ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLEL 177
LPE E+ R +L T G T Y++G +HVS+ESC E +I ++P+VV LEL
Sbjct: 49 LPELSAEVRRDTAVLEA-RTEGGATARAYVLGVSHVSRESCEEAAELIRAVRPEVVVLEL 107
Query: 178 CSSRVSMLTPQN 189
C R+ +L Q+
Sbjct: 108 CKDRLRLLLDQD 119
>gi|57641048|ref|YP_183526.1| signaling protein [Thermococcus kodakarensis KOD1]
gi|57159372|dbj|BAD85302.1| predicted signaling protein, TraB family [Thermococcus kodakarensis
KOD1]
Length = 227
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 29/224 (12%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V ++GT HVS +S EV I +P V +EL +R + Q +++ T+ + + + +K
Sbjct: 7 VKIIGTMHVSPKSRDEVFRTILKERPHAVAVELDRARFIGMQ-QKIEM-TLSDSLRLGRK 64
Query: 205 KHNTFGILYSWFLAKVASHL-EIF---PGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
G++ ++ LAKV L E F PG E + A E A G + L D + + L +
Sbjct: 65 -----GVI-NYVLAKVEEKLGETFGMAPGEEMKAAIEAARAIGVPLYLIDEDIGLILAKI 118
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLP-SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMET 319
+ P+ KLL + FLP A D+ D + ++ E + +P L
Sbjct: 119 -SRAPVRE--KLLMALESLGVFLPIKAVDIG------DPFEEYRWMMLEFRRRYPYLYRV 169
Query: 320 LVHERDQYMSSTLLKV-------ATEHSSVVAVVGKGHLQGIKN 356
LV ER++ M+ L+ + + VVAVVG GH GI+
Sbjct: 170 LVEERNEVMARNLMMIVDSLLAGGVQRPKVVAVVGLGHKPGIER 213
>gi|397627295|gb|EJK68419.1| hypothetical protein THAOC_10400 [Thalassiosira oceanica]
Length = 427
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 121/317 (38%), Gaps = 86/317 (27%)
Query: 134 CD---STAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML----- 185
CD ST GT V+L+GTAH+S S ++ +KP VVF+EL RV
Sbjct: 109 CDPAVSTWAKGTRLVHLLGTAHISSSSAELAGRMVQEVKPDVVFVELDKKRVGRAGLSNI 168
Query: 186 --TPQNLKVPTVGEMVDMW------------------KKKHNTFGI---LYSWFLAKVAS 222
QN ++ E K + F + + S +V +
Sbjct: 169 ENNAQNGASTSITERSGSSGASSSFFSTPNTEPPSADAKMSSPFDVQSRIESAGAQQVGN 228
Query: 223 HLEIFPG----------SEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKL 272
++ G EF + E + G ++LGDR V++TL+R + KL
Sbjct: 229 AMKGMYGKLESEGFKAGDEFARSVREGLLLGSTIVLGDRDVEVTLKRLTRAVTKTDIRKL 288
Query: 273 LYSF----LFQAFFLPS---------------------AEDLNRMLKEMDDV-------D 300
+ S LPS +ED+ +E D +
Sbjct: 289 ISSDSEIEKSMESLLPSDMKDSLQKRQSSNSGIDSMNVSEDVYISKREFTDFVETMKAKE 348
Query: 301 MLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKV-----ATEHSSVVAVVGKGHLQGIK 355
+ +++ + K+ P + +V ERD+YM++ L ++ + S AVVG H+ GI+
Sbjct: 349 NVKVIMGALKKSAPEIYTAMVAERDEYMANGLDQLDATLAGKKIDSTCAVVGMAHVDGIE 408
Query: 356 NY-----WKQ---PVPV 364
WKQ P PV
Sbjct: 409 TILAGRGWKQLTYPCPV 425
>gi|412986070|emb|CCO17270.1| predicted protein [Bathycoccus prasinos]
Length = 522
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 26/156 (16%)
Query: 124 ELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVS 183
+L R V+ L+ + E V LVGTAHVSK+S E II +P+++F+EL +R+
Sbjct: 37 DLERCVLRLSSSNGKE-----VILVGTAHVSKDSAETTERIIREERPEIIFIELDKNRLE 91
Query: 184 MLTPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFP--------------- 228
L L ++GE ++ KK + S L V S+L+ P
Sbjct: 92 KL----LLNRSLGER-EVLKKTIEKIRDIPSA-LKFVMSNLKDVPGFVYQLGGLIVGSPA 145
Query: 229 GSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKM 264
G+EF A E A G V+LGDR ++T R +++
Sbjct: 146 GNEFTKAIEVAGDIGALVVLGDRSAEVTASRVMQRV 181
>gi|66807335|ref|XP_637390.1| hypothetical protein DDB_G0287043 [Dictyostelium discoideum AX4]
gi|60465812|gb|EAL63886.1| hypothetical protein DDB_G0287043 [Dictyostelium discoideum AX4]
Length = 360
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 112/251 (44%), Gaps = 35/251 (13%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR------------VSMLTPQNLK 191
D++++G+ H S++S +V+ I +KP + LEL SR +S Q+ +
Sbjct: 63 DIFMIGSVHTSRDSATQVQKFIRDVKPDALVLELDDSRFNKIRNDIHNKDLSTYKTQSNE 122
Query: 192 VPTVGEMV--DMWKKKHNTF-GILYSWFLAKVASHLEIF---PGSEFRVAFEEAMKYGGK 245
+ +M+ +++ + + F G+L F K + ++ F PG EF A +EA G +
Sbjct: 123 DDSFLQMLFGNLFGGQSSPFAGVLIKNF-KKFQNTMKTFGLIPGLEFYFAIKEAENLGCE 181
Query: 246 VILGDRPVQITLRRTWEKMPL------------WHKIKLLYSFLFQAFFLPSA--EDLNR 291
+ILGD IT+ + P ++ L S L A +++
Sbjct: 182 IILGDVDSNITINKLLHAAPSEFFSKSNGISPDMERLNQLMSPLVHIMMKDGATEKEIEV 241
Query: 292 MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHL 351
K + + L V K P E L R+++++ ++ + ++ +++V VVG H+
Sbjct: 242 EYKRILNNKTLNEVRSIFEKELPKTYEALCIGRERHITRSIKQ--SKANTIVVVVGALHV 299
Query: 352 QGIKNYWKQPV 362
GIK P+
Sbjct: 300 DGIKKLLNLPL 310
>gi|424814358|ref|ZP_18239536.1| TraB family protein [Candidatus Nanosalina sp. J07AB43]
gi|339757974|gb|EGQ43231.1| TraB family protein [Candidatus Nanosalina sp. J07AB43]
Length = 217
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 95/218 (43%), Gaps = 20/218 (9%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLK-PQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
+ + GT+HVS+ES ++ FL+ P VV LEL R+ L + +
Sbjct: 2 ISIYGTSHVSQESIEVIDQA--FLEDPDVVALELDPPRLEALMFEG-----------RGR 48
Query: 204 KKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
+ F L F + + PG E A+ ++ V L DR +++T+ R +
Sbjct: 49 DDGSVFIRLLERFQKYIGGKTGLMPGEEMLYAYNRGIQENLDVALVDRDIRVTVERLKKV 108
Query: 264 MPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHE 323
L F +P D + + + + + + ++ E+ +FP + + L+ E
Sbjct: 109 RRKEKVKAFFS--LLGGFLIPFGGDFD--IGSIPEEEKIDRMVSELRHSFPEIYQVLMEE 164
Query: 324 RDQYMSSTLLKVATEHSS--VVAVVGKGHLQGIKNYWK 359
R++Y+ +L+++ ++ S + +G H Q + + +
Sbjct: 165 RNRYICRSLVQLQEDNPSDDIAVFLGAAHCQPVSDLLR 202
>gi|448336412|ref|ZP_21525511.1| TraB determinant protein [Natrinema pallidum DSM 3751]
gi|445629152|gb|ELY82446.1| TraB determinant protein [Natrinema pallidum DSM 3751]
Length = 252
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 87/223 (39%), Gaps = 21/223 (9%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V +V + H S CR V I ++P +V +EL SR L + P + E+
Sbjct: 7 VTVVPSVHFSPTHCRRVRERIRAVEPNLVAVELDESRFERL--EAATEPDLAELSRELSP 64
Query: 205 KHNTFGILYSWFLAKVASHLEIFPG-SEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
F V + P ++ A E A + V L D PV TLR +
Sbjct: 65 PAAAAYSAVRAFQRTVVRLAGLDPEYTDMEAAIETAAERDLDVALIDDPVAETLRELARR 124
Query: 264 M-PLWHKIKLL---------YSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAF 313
+ PL +L Y+ L P AE + DDV I + + F
Sbjct: 125 IGPLTIPRSMLRAQSMGPDAYADLLALLEQPVAE-----ISHGDDV---RPAIDHLRRLF 176
Query: 314 PTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKN 356
P + L+ RD+ M+ L + E VVAVVG GH G++
Sbjct: 177 PEVAAGLIDRRDRSMARRLHALRREGHDVVAVVGAGHHNGVER 219
>gi|145345435|ref|XP_001417216.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577443|gb|ABO95509.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 477
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV-SMLTPQNLKVPTVGEMVDMW 202
++ L+G+AHVS+ S REV I KP +V +EL R+ S+L + P +
Sbjct: 61 EITLIGSAHVSEASAREVSRAILEGKPDLVVIELDGDRLKSLLRSASEDRPAM-HAARRV 119
Query: 203 KKKHNTFGILYSWFLAKVASH---------LEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
F L + LA VA L+ PG+EF A E A G V+LGDR
Sbjct: 120 ASVREAFNTLVNGQLAIVAGSLGYSTIGAVLDTRPGAEFIAAVEAARDVGATVVLGDRNQ 179
Query: 254 QITLRRTWEKMPLWHKIKLLYSFLFQ-AFFLPSAEDLNR 291
+ T+ R M + L+ L + FL DL R
Sbjct: 180 RATVGRL---MARVRRGSTLFDELAKTGEFLGGETDLAR 215
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 318 ETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
ET++ ERD +++ L + T SSVV VVG GH+ GI+ W +
Sbjct: 312 ETVIRERDLILATALQRDPTA-SSVVGVVGAGHIAGIQQLWDE 353
>gi|341581907|ref|YP_004762399.1| signaling protein [Thermococcus sp. 4557]
gi|340809565|gb|AEK72722.1| signaling protein [Thermococcus sp. 4557]
Length = 233
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V L+GT HVS +S EV I +P V +EL R L + T+ + + +K
Sbjct: 7 VKLIGTMHVSPKSREEVIRTILDERPNAVAIEL--DRARFLAMNENREMTLEDALRFGRK 64
Query: 205 KHNTFGILYSWFLAKVASHL-EIF---PGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
L ++ LAKV L E F PG E + A A G + L D + + L +
Sbjct: 65 G------LINYALAKVEEKLGEEFGMKPGEEMKAAISAAQTLGIPLYLIDEDINVILSKI 118
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
P + KLL + FLP R+ + D + +++ E + +P L L
Sbjct: 119 -AAAP--GREKLLMALEALGIFLPV-----RLGEPSDPMAEYRVMMVEFKRRYPYLYRVL 170
Query: 321 VHERDQYMSSTLLKV-------ATEHSSVVAVVGKGHLQGIKN 356
V ER++ M+ L+ + + V+AVVG GH GI++
Sbjct: 171 VEERNEVMARNLVSIVENLKLRGVKRPKVIAVVGLGHKPGIEH 213
>gi|433592771|ref|YP_007282267.1| putative PrgY-like protein, pheromone shutdown like protein
[Natrinema pellirubrum DSM 15624]
gi|448335216|ref|ZP_21524366.1| TraB determinant protein [Natrinema pellirubrum DSM 15624]
gi|433307551|gb|AGB33363.1| putative PrgY-like protein, pheromone shutdown like protein
[Natrinema pellirubrum DSM 15624]
gi|445617597|gb|ELY71191.1| TraB determinant protein [Natrinema pellirubrum DSM 15624]
Length = 252
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 87/219 (39%), Gaps = 13/219 (5%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V +V + H S CR V I ++P +V +EL SR L + P + E+
Sbjct: 7 VTVVPSVHFSPTHCRRVRERIRAVEPDLVAVELDESRFERLEADS--GPALTELSRELSP 64
Query: 205 KHNTFGILYSWFLAKVASHLEIFPG-SEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
F V + P ++ A E A + V L D PV TLR +
Sbjct: 65 PAAAAYSAVRAFQRTVVRLAGLDPDYTDMEAAIETAAECDLDVALIDDPVAETLRELARR 124
Query: 264 M-PLWHKIKLLYSFLFQAFFLPSAED-----LNRMLKEMDDVDMLTLVIQEMSKAFPTLM 317
+ PL + S L P A L R + E+ D + I + + FP +
Sbjct: 125 VGPLT----IPRSMLRAQSMGPDAYADQLALLERPVAEISHGDDVQPAIDHLRRLFPEVA 180
Query: 318 ETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKN 356
L+ RD+ M+ L + + VVAVVG GH G++
Sbjct: 181 AVLIDRRDRAMAQRLHALRRDGHDVVAVVGAGHHNGLER 219
>gi|240103138|ref|YP_002959447.1| Signaling protein, TraB family [Thermococcus gammatolerans EJ3]
gi|239910692|gb|ACS33583.1| Signaling protein, TraB family [Thermococcus gammatolerans EJ3]
Length = 237
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 33/232 (14%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V L+GT HVS S EV I+ ++P + +EL R L G+ D+ +
Sbjct: 7 VRLIGTMHVSPRSREEVRREIERVRPNAIAVELDPLRFQGLLS--------GKRADLRES 58
Query: 205 ----KHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
+ L + F K+ + PG E A E A G +IL D +++ + +
Sbjct: 59 LTLGRAGIVSYLLTKFEEKLGEEFGMAPGGEMLAAIESAGILGVPLILIDEDIRVIMGKI 118
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTL---VIQEMSKAFPTLM 317
+ PL +I L + FF+P + + D D+L +++E +P L
Sbjct: 119 LQA-PLRERI--LLALEASLFFIPGVGE-----EVAGDSDVLASYEDMMREFRLRYPYLY 170
Query: 318 ETLVHERDQYMSSTLLKV-------ATEHSSVVAVVGKGHLQGIK---NYWK 359
LV ER++ M+ L + + +VAVVG GH +GI+ N W+
Sbjct: 171 RVLVEERNEIMAMNLKRAVDDMLLRGVKKPKIVAVVGMGHKRGIERILNSWR 222
>gi|227518246|ref|ZP_03948295.1| possible prolipoprotein diacylglyceryl transferase [Enterococcus
faecalis TX0104]
gi|422867632|ref|ZP_16914203.1| TraB family protein [Enterococcus faecalis TX1467]
gi|424684421|ref|ZP_18121138.1| TraB family protein [Enterococcus faecalis ERV129]
gi|424687914|ref|ZP_18124535.1| TraB family protein [Enterococcus faecalis ERV25]
gi|424689819|ref|ZP_18126361.1| TraB family protein [Enterococcus faecalis ERV31]
gi|424694733|ref|ZP_18131128.1| TraB family protein [Enterococcus faecalis ERV37]
gi|424732098|ref|ZP_18160678.1| TraB family protein [Enterococcus faecalis ERV81]
gi|424734592|ref|ZP_18163089.1| TraB family protein [Enterococcus faecalis ERV85]
gi|227074304|gb|EEI12267.1| possible prolipoprotein diacylglyceryl transferase [Enterococcus
faecalis TX0104]
gi|329577203|gb|EGG58672.1| TraB family protein [Enterococcus faecalis TX1467]
gi|402361543|gb|EJU96095.1| TraB family protein [Enterococcus faecalis ERV129]
gi|402362533|gb|EJU97061.1| TraB family protein [Enterococcus faecalis ERV25]
gi|402366031|gb|EJV00437.1| TraB family protein [Enterococcus faecalis ERV31]
gi|402370025|gb|EJV04270.1| TraB family protein [Enterococcus faecalis ERV37]
gi|402392578|gb|EJV25828.1| TraB family protein [Enterococcus faecalis ERV81]
gi|402407193|gb|EJV39729.1| TraB family protein [Enterococcus faecalis ERV85]
Length = 332
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 23/144 (15%)
Query: 146 YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKK 205
YLVGT+H+S+ S + V+ +I+ ++P V +EL R T N W
Sbjct: 26 YLVGTSHISENSVKLVKEVIERVQPDTVSIELDKKRYEKYTNSN-----------QWGNT 74
Query: 206 HNTF------------GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
I+YS + K+A+ E A + A + G + L DR +
Sbjct: 75 DIIKIIKEKKLVVLISNIVYSAYQKKLANTKGTTQAGELIQAVKSAKEIGANIQLIDRDI 134
Query: 254 QITLRRTWEKMPLWHKIKLLYSFL 277
Q+T +R W + K KL +F
Sbjct: 135 QVTFKRMWRHLSFLEKPKLFMTFF 158
>gi|418428849|ref|ZP_13001827.1| prolipoprotein diacylglyceryl transferase [Staphylococcus aureus
subsp. aureus VRS2]
gi|418444401|ref|ZP_13015973.1| prolipoprotein diacylglyceryl transferase [Staphylococcus aureus
subsp. aureus VRS7]
gi|421513622|ref|ZP_15960381.1| Pheromone shutdown protein TraB, PrgY [Enterococcus faecalis ATCC
29212]
gi|387714830|gb|EIK02942.1| prolipoprotein diacylglyceryl transferase [Staphylococcus aureus
subsp. aureus VRS2]
gi|387732367|gb|EIK19596.1| prolipoprotein diacylglyceryl transferase [Staphylococcus aureus
subsp. aureus VRS7]
gi|401673284|gb|EJS79683.1| Pheromone shutdown protein TraB, PrgY [Enterococcus faecalis ATCC
29212]
Length = 327
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 23/144 (15%)
Query: 146 YLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKKK 205
YLVGT+H+S+ S + V+ +I+ ++P V +EL R T N W
Sbjct: 21 YLVGTSHISENSVKLVKEVIERVQPDTVSIELDKKRYEKYTNSN-----------QWGNT 69
Query: 206 HNTF------------GILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPV 253
I+YS + K+A+ E A + A + G + L DR +
Sbjct: 70 DIIKIIKEKKLVVLISNIVYSAYQKKLANTKGTTQAGELIQAVKSAKEIGANIQLIDRDI 129
Query: 254 QITLRRTWEKMPLWHKIKLLYSFL 277
Q+T +R W + K KL +F
Sbjct: 130 QVTFKRMWRHLSFLEKPKLFMTFF 153
>gi|448373842|ref|ZP_21557812.1| TraB determinant protein [Halovivax asiaticus JCM 14624]
gi|445661213|gb|ELZ14005.1| TraB determinant protein [Halovivax asiaticus JCM 14624]
Length = 293
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 287 EDLNRM-LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAV 345
ED + + ++ D D++T +++E + P E L+ ERD ++++ L + E VVAV
Sbjct: 18 EDFDDFDIDQLTDGDVVTAMMEEFRRFSPGGAEALIDERDAFIANRLHALRNEGYHVVAV 77
Query: 346 VGKGHLQGIKNYWKQP 361
VG GH GI+ Y P
Sbjct: 78 VGAGHRAGIEQYLDNP 93
>gi|375082901|ref|ZP_09729943.1| signaling protein, TraB family [Thermococcus litoralis DSM 5473]
gi|374742399|gb|EHR78795.1| signaling protein, TraB family [Thermococcus litoralis DSM 5473]
Length = 233
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 17/219 (7%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V ++GT HVS +S REV +I KP + +EL R L Q+ + T E V + KK
Sbjct: 7 VKVIGTMHVSPKSRREVRKVILEEKPDAIAIELDRQRFYSL--QSSERITFKEAVKLGKK 64
Query: 205 KHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKM 264
G + K+ + PG E A + A G + L D +Q + + +
Sbjct: 65 --ALLGYILMKVEEKIGEEFGMKPGGEMMEAIQTASLLGVPLYLIDEDIQSIMGKLL-RA 121
Query: 265 PLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHER 324
PL KI LL FLP A + + D ++ +++ +P L LV ER
Sbjct: 122 PLREKILLLLE--SSLVFLPIAPEAE---SQEDIMESYKVMMHRFKLRYPYLFRILVEER 176
Query: 325 DQYMSSTLLKVATE-------HSSVVAVVGKGHLQGIKN 356
++ M+ L + E VVAVVG GH +GI+
Sbjct: 177 NEIMARNLKAIVDELKRRGVKKPKVVAVVGLGHKKGIEK 215
>gi|448313545|ref|ZP_21503260.1| TraB family protein [Natronolimnobius innermongolicus JCM 12255]
gi|445598032|gb|ELY52101.1| TraB family protein [Natronolimnobius innermongolicus JCM 12255]
Length = 263
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 16/222 (7%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+ LV + H S R V I +P VV +EL R L P + ++ +
Sbjct: 7 ITLVPSVHFSPTHRRRVRQTIRDQEPDVVAVELDERRYERLEGDRRSDPDLPPVIAV--- 63
Query: 205 KHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKM 264
G+L + + V + ++ A E A + G V L D P+ TL E +
Sbjct: 64 ---ACGVLRTIQRSIVRLYGLDPSQTDMETAVETAGERGIDVALIDDPIAETL----EAL 116
Query: 265 PLWHKIKLLYSFLFQAFFLP------SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
+LL + +A L E L+R ++E+ + + I+++ P L E
Sbjct: 117 GSRVGPELLPKLVSRAQRLDPDQQARQLEQLSRSVEEITSGEDVQPAIEQLRLLVPELTE 176
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
++ RD+ M++ L + E VVAVVG GH GI++ Q
Sbjct: 177 VMIDRRDRSMAARLHALRREGYDVVAVVGAGHHLGIEDRLAQ 218
>gi|159485094|ref|XP_001700584.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272224|gb|EDO98028.1| predicted protein [Chlamydomonas reinhardtii]
Length = 467
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 121 LPEELPRSVVILTC-DSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCS 179
LP L +V +L + TA GG VYL+ +HVSK S +V +I ++P+VV +ELC
Sbjct: 24 LPPSLRNAVAVLEAPNPTAPGGKTSVYLLAMSHVSKRSVEQVHELIHLVRPEVVAVELCK 83
Query: 180 SRVSML 185
R +L
Sbjct: 84 ERSGLL 89
>gi|298705470|emb|CBJ28745.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 531
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 77/183 (42%), Gaps = 51/183 (27%)
Query: 123 EELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV 182
+ +P + ++L ++T CD+YLVG H S S R+V+ +++ ++P V LELC SR
Sbjct: 100 QNIPHTSLVLRDEATG----CDIYLVGCLHGSHASGRDVQDVLEKVRPGAVVLELCESRH 155
Query: 183 SMLTPQNLKVPTVG----EMVDMWKKKHNTF---------------GILYSWFLA-KVAS 222
L ++L+ G E + W +++ GIL A V
Sbjct: 156 KALR-RDLEKRAKGDAPLEGKERWASAFSSWAKGVKKTSAKSGLVQGILSGLLSAPYVVQ 214
Query: 223 HLEIF-PGSEFRVA-----------FEEAMKYG--------------GKVILGDRPVQIT 256
L F PG EF+ A + + G V+LGDR VQ T
Sbjct: 215 RLGDFDPGLEFKTAMVYADPSVRPGYSTGVARGMVSPAAGGGAGPGECSVVLGDRDVQET 274
Query: 257 LRR 259
LRR
Sbjct: 275 LRR 277
>gi|330791793|ref|XP_003283976.1| hypothetical protein DICPUDRAFT_91219 [Dictyostelium purpureum]
gi|325086134|gb|EGC39529.1| hypothetical protein DICPUDRAFT_91219 [Dictyostelium purpureum]
Length = 245
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 229 GSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWH----KIKLLYSFLFQAFFLP 284
G+EFRVA+ A + ++LGDR ++T +R + L ++ + S+ FQ +
Sbjct: 23 GTEFRVAYNYAKENKCTIVLGDRDSRVTWKRVANYLDLGTIFNVSMQTIKSY-FQLYNKS 81
Query: 285 SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPT-LMETLVHERDQYMSSTLLKVATEHSSVV 343
+ E KE E + P + L+ ERDQYM+S + + +V
Sbjct: 82 AKEIREIYYKEASKTINEPWDSVEWRNSLPLPAKKGLIDERDQYMASCIRDAPGK--KIV 139
Query: 344 AVVGKGHLQGI 354
AVVGKGH++GI
Sbjct: 140 AVVGKGHVKGI 150
>gi|428179061|gb|EKX47934.1| hypothetical protein GUITHDRAFT_106481 [Guillardia theta CCMP2712]
Length = 332
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 72/294 (24%)
Query: 123 EELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRV 182
EELP S S+ VY++GT HVS+ S +V + L+P+VV LELC R
Sbjct: 6 EELPSSTAYFYEPSS----RTHVYILGTFHVSQASTEDVRQCLRLLRPRVVCLELCLDRF 61
Query: 183 SML---TPQNLKVPTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEA 239
+ +P K G +++ + L+ + + + G EF A +EA
Sbjct: 62 LCMFDSSPSKTKEERGGSIMN------KSIADLFISSVYAILQRAGMESGGEFVAAVQEA 115
Query: 240 MKYGGKVILGD-----------RPVQIT-------------------------------- 256
G V+LGD + V IT
Sbjct: 116 KALGCSVVLGDINATDTFDELSKLVSITEMFDIPSALRGIRGFASSFTPSAGGRVDFLQV 175
Query: 257 ---LRRTWEKMPLWHKIKLLYSFLFQ-AFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKA 312
RR E +P I L S L A++ SA +++ E D ++++ + +
Sbjct: 176 FSDSRRILELVPFSAAIFLSSSILTTIAWYAESAAGVSQASHESVDDLIVSIPLIVIFAL 235
Query: 313 FPTLMETLVHERDQYMSSTLLKVAT------------EHSSVVAVVGKGHLQGI 354
P + L+ RD+++ ++L+ + +++V+A+VG H+ G+
Sbjct: 236 IPRIHPVLIESRDKFLLKSILECCSLRKQLPDTREQLRNNTVLAIVGLLHVNGM 289
>gi|284114490|ref|ZP_06386672.1| Pheromone shutdown protein [Candidatus Poribacteria sp. WGA-A3]
gi|283829581|gb|EFC33922.1| Pheromone shutdown protein [Candidatus Poribacteria sp. WGA-A3]
Length = 219
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 300 DMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIK 355
D+L+ ++QE+ + P+L L+ ERD+Y++ L+ E ++V+VVG GH++GIK
Sbjct: 1 DVLSEMMQELGREVPSLKTVLIDERDRYLAEKTLQ--AEGKTIVSVVGAGHVEGIK 54
>gi|409096055|ref|ZP_11216079.1| Pheromone shutdown protein [Thermococcus zilligii AN1]
Length = 221
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 88/222 (39%), Gaps = 24/222 (10%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V ++GT HVS S EV + I +P V +E L P L GE D
Sbjct: 7 VKVIGTMHVSPLSREEVVSAIKKERPTAVAVE--------LDPLRLHSLLSGERADFVTS 58
Query: 205 KHNTFGILYSWFLAK----VASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
G L + L K + + PG E A + A + G + L D ++ L +
Sbjct: 59 LKLGRGGLVGYLLTKFEEILGREFGMEPGGEMIAAVKAAGEMGIPLYLIDEDIRTILTKI 118
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
+ LL F + FLP ++D +TL E + +P L L
Sbjct: 119 LAAPRREKLLLLLEGF---SVFLPLVGGAETPASPVEDYRWMTL---EFRRRYPYLYRVL 172
Query: 321 VHERDQYMSSTLLKV------ATEHSSVVAVVGKGHLQGIKN 356
V ER+ M+ L+ + T VVAVVG GH +GI+
Sbjct: 173 VEERNAIMAGNLVSIVRNLLAVTRKPKVVAVVGLGHREGIER 214
>gi|448323507|ref|ZP_21512965.1| TraB family protein [Natronococcus amylolyticus DSM 10524]
gi|445599403|gb|ELY53436.1| TraB family protein [Natronococcus amylolyticus DSM 10524]
Length = 253
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 16/225 (7%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+ V + H S R V I P +V +EL R L + PT ++ +
Sbjct: 7 ITFVPSVHFSPTHRRRVRETIRAEAPDLVAVELDEFRFEHL--DRDRRPTFDDVARTFPS 64
Query: 205 --KHNTFGILYSWFLAKVASHLEIF--PGSEFRVAFEEAMKYGGKVILGDRPVQITL--- 257
T+G + + L + L ++ A E A + ++ L D + TL
Sbjct: 65 TPAAATYGAITA--LQRTVVRLSGLDPETTDMEAAIETAAELDTEIALIDERIAKTLAEL 122
Query: 258 --RRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPT 315
R + E +P K+ L L E L + + E++ D + I ++ + P
Sbjct: 123 SSRVSLETLP---KLCLRMQRLGPQMQAAQIESLTQPVDEIEHGDDVQPAIDQLRQLLPE 179
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
+ E ++ RD+ M+ L ++ E + VVAV+G GH GI++ ++
Sbjct: 180 VAEVMIDRRDRVMAQRLHRLRREGNDVVAVIGAGHHNGIQHALEE 224
>gi|323448453|gb|EGB04351.1| hypothetical protein AURANDRAFT_72545 [Aureococcus anophagefferens]
Length = 3081
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML 185
D+YLVGTAH+ K+S EV IID ++P+ V +ELC R + L
Sbjct: 2770 DIYLVGTAHIGKKSREEVVDIIDKVQPKAVMVELCRGRAASL 2811
Score = 43.5 bits (101), Expect = 0.16, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 309 MSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQPVPVHDLM 368
+ + P + L+H RD +M+ L A H SVV VVG H+ GI+ + VH L
Sbjct: 2953 LDRHAPDVANALLHARDAHMADELQAAAKAHGSVVGVVGIAHMDGIERRFPNATVVH-LD 3011
Query: 369 TIPSPKPAVSALKVLSSLG 387
+ + S K++ S G
Sbjct: 3012 GASAAQKETSHFKMIVSCG 3030
>gi|42408086|dbj|BAD09227.1| hypothetical protein [Oryza sativa Japonica Group]
gi|42408563|dbj|BAD09741.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 269
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 54/215 (25%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWK 203
DV+++GT+H+S+ES +VE ++ ++P C + + +T + + GE +
Sbjct: 79 DVWILGTSHLSEESVADVERVLRAVRPDNSLH--CRAGIMYVTTDS----SAGEPL---- 128
Query: 204 KKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEK 263
K N F + GS+F A ++ GG+
Sbjct: 129 LKSNMFSL----------------GGSKFFGAVNRSINLGGQT----------------- 155
Query: 264 MPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLT--LVIQEMSKAFPTLMETLV 321
L L F + NR E D+ + + +++S ++P+L++ L+
Sbjct: 156 -------ALALRLLLAVFSSKISSGANRPFGEEDEKAAGSPYELYEKLSISYPSLLQPLI 208
Query: 322 HERDQYMSSTLL--KVATEHSSVVAVVGKGHLQGI 354
HERD +++ +L K + +VV ++GKGH+ G+
Sbjct: 209 HERDMFLAWSLKRSKAVNKSKTVVGIIGKGHMNGV 243
>gi|302794965|ref|XP_002979246.1| hypothetical protein SELMODRAFT_419071 [Selaginella moellendorffii]
gi|300153014|gb|EFJ19654.1| hypothetical protein SELMODRAFT_419071 [Selaginella moellendorffii]
Length = 145
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML 185
+++LVGTAHVS +S EVE +I +KP +V +ELC R L
Sbjct: 30 AEIFLVGTAHVSAKSAEEVEEVIGIVKPDIVAVELCEERAKKL 72
>gi|321477647|gb|EFX88605.1| hypothetical protein DAPPUDRAFT_95443 [Daphnia pulex]
Length = 486
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 99 DESSDRDETNGAVPVPEETKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESC 158
DE DET + P E+ K LP +V LT + +G VYLVGTAH S ES
Sbjct: 305 DEGHLNDETTNSDPEVEQLMK-----LPETVSQLT---SKDG--VKVYLVGTAHFSLESQ 354
Query: 159 REVEAIIDFLKPQVVFLELCSSRVSML 185
+V I +P+VV +ELC SR+++L
Sbjct: 355 EDVAKTILMTRPRVVVVELCVSRLNIL 381
>gi|448391271|ref|ZP_21566514.1| TraB determinant protein [Haloterrigena salina JCM 13891]
gi|445666140|gb|ELZ18809.1| TraB determinant protein [Haloterrigena salina JCM 13891]
Length = 265
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 11/221 (4%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+ +V + H S R V + I +P VV +EL R L ++ + P +++ ++
Sbjct: 7 ITIVPSVHFSPTHRRRVRSTIRETEPDVVAVELDDRRYDRLEERSGRSP-----LELARE 61
Query: 205 KHNTFGILYSWFLAKVASHLEIF---PG-SEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
Y+ + + ++ PG ++ A E A + V L D P+ TL
Sbjct: 62 LPPATAAAYTVLQTVQRTVVRLYGLDPGQTDMEAAVETAAELDRDVALIDDPIAETLSAL 121
Query: 261 WEKM--PLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLME 318
+++ L K+ + E L +E+ + + I++M P L E
Sbjct: 122 ADRVGPELLPKLFARTQRMGPDRQAKQLELLTTSFEEITSGEDVQPAIEQMRLLLPELTE 181
Query: 319 TLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK 359
++ RD+ M L + +E VVAVVG GH GIK +
Sbjct: 182 VMIDRRDRSMGRRLHALRSEGHDVVAVVGAGHHLGIKRTLE 222
>gi|284166076|ref|YP_003404355.1| TraB determinant protein [Haloterrigena turkmenica DSM 5511]
gi|284015731|gb|ADB61682.1| TraB determinant protein [Haloterrigena turkmenica DSM 5511]
Length = 265
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 17/224 (7%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
+ +V + H S R V + I +P VV +EL R L ++ + P +++ ++
Sbjct: 7 ITIVPSVHFSPTHRRRVRSTIRETEPDVVAVELDDRRYDRLEERSGRSP-----LELARE 61
Query: 205 KHNTFGILYSWFLAKVASHLEIF---PG-SEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
Y+ A + + ++ PG ++ A E A + V L D P+ TL
Sbjct: 62 LPPATAAAYTVLQAIQRTVVRLYGLDPGQTDMEAAVETAAELDIDVALIDDPIAETLSAL 121
Query: 261 WEKM--PLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDV---DMLTLVIQEMSKAFPT 315
+++ L K L++ + A+ L + +D+ + + I++M P
Sbjct: 122 ADRVGPELLPK---LFARTQRMGPDQQAKQLELLTTSFEDITSGEDVQPAIEQMRLLLPE 178
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWK 359
L E ++ RD+ M L + +E VVAVVG GH GIK +
Sbjct: 179 LTEIMIDRRDRSMGRRLHALRSEGHDVVAVVGAGHHLGIKRTLE 222
>gi|397619626|gb|EJK65340.1| hypothetical protein THAOC_13812 [Thalassiosira oceanica]
Length = 467
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 22/190 (11%)
Query: 133 TCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKV 192
T +A G +V+++GT+H S EV ++I ++P + LEL R LT Q +
Sbjct: 37 TSTKSANGSRANVFVIGTSHFRCGSAVEVASLIAKVRPDGLLLELDPERTVRLTKQFHRF 96
Query: 193 PTVGEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRP 252
GE + +++ + + ++ G++F A + LGD
Sbjct: 97 NADGEKIPEREQQRG----------PESNVNGDLLYGADFVSAINTCQDLDIPLFLGDEY 146
Query: 253 VQITLRRTWEKMPLWHK---IKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEM 309
Q T R EK W + LL SF+ +++R + D +D++ +
Sbjct: 147 AQETFSRLREKSLDWKSYSPVPLLRSFM---------TNMSRGVSSSDFIDIVQTFRSDP 197
Query: 310 SKAFPTLMET 319
KA P L+ T
Sbjct: 198 QKATPLLVTT 207
>gi|294932209|ref|XP_002780158.1| hypothetical protein Pmar_PMAR019055 [Perkinsus marinus ATCC 50983]
gi|239890080|gb|EER11953.1| hypothetical protein Pmar_PMAR019055 [Perkinsus marinus ATCC 50983]
Length = 297
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 316 LMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYW 358
L E ++ RD+YM L ++A +H+ V+AVVG+ H++GI W
Sbjct: 227 LQEVVIDMRDEYMYRALWRLACKHNRVIAVVGENHVKGIHKRW 269
>gi|326428482|gb|EGD74052.1| hypothetical protein PTSG_05744 [Salpingoeca sp. ATCC 50818]
Length = 108
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQN 189
VYL GTAHVSK+S + ++ L+P VVFLELC R S L Q+
Sbjct: 23 VYLFGTAHVSKQSTLDAANLVRHLRPAVVFLELCPER-SFLLKQD 66
>gi|298709027|emb|CBJ30977.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 507
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP 187
+VY++GT+H S+ S V +++ ++PQ V +ELC SR ++ P
Sbjct: 130 EVYVLGTSHASETSAGHVRRVVEAVRPQSVVVELCKSRAGLMMP 173
>gi|20093579|ref|NP_613426.1| hypothetical protein MK0139 [Methanopyrus kandleri AV19]
gi|19886435|gb|AAM01356.1| Uncharacterized conserved protein, PrgY homolog [Methanopyrus
kandleri AV19]
Length = 249
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 95/232 (40%), Gaps = 16/232 (6%)
Query: 143 CDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMW 202
++Y++ TAH + R I++ L P+ V +ELC R+ + L+ G
Sbjct: 11 SELYVLRTAHAGVDGDRVRRKILE-LDPEAVLVELCEGRLLSFLAE-LRGERAG------ 62
Query: 203 KKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWE 262
+ G L + V + G + + A E A++ +++ D + RR
Sbjct: 63 SRTGGITGRLVAVAERIVGRVVGGELGEDVKGAIEAALELEAEIVPVDMDISWVFRRMKM 122
Query: 263 KMPLWHKIKLLYSFLFQAF--FLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETL 320
K W +K +S L + + +L + D + ++Q + +AFP + E L
Sbjct: 123 KASRWELLKFQFSVAIDVLRSLLRPGQTRDVVLSSVADEEAAREMVQGLRRAFPRIAEVL 182
Query: 321 VHERDQYMSSTLLKVATEHSSV---VAVVGKGH---LQGIKNYWKQPVPVHD 366
+ ER++ ++ ++ V V V+G H L +++ + HD
Sbjct: 183 IDERNRVIAENTIEFLHSREDVTKAVLVIGAAHYGVLDILRDAELESASRHD 234
>gi|212223397|ref|YP_002306633.1| signaling protein [Thermococcus onnurineus NA1]
gi|212008354|gb|ACJ15736.1| Hypothetical signaling protein [Thermococcus onnurineus NA1]
Length = 233
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 29/200 (14%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTPQNLKVPTVGEMVDMWKK 204
V L+GT HVS +S EV + I KP V +EL +R + QN ++ T+ E + KK
Sbjct: 7 VKLIGTMHVSPKSREEVISTILSEKPHAVAIELDRARF-LAMKQNREL-TLEESLRYGKK 64
Query: 205 KHNTFGILYSWFLAKVASHL-EIF---PGSEFRVAFEEAMKYGGKVILGDRPVQITLRRT 260
L ++ LAKV L E F PG E + A A G + L D + + L +
Sbjct: 65 G------LINYVLAKVEERLGEEFGMKPGEEMKAAISAAQTLGVPLYLIDEDINVILAKI 118
Query: 261 WEKMPLWHKIKLLYSFLFQAFFLP-----SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPT 315
P + KLL + + FLP S+ D+ M D ++ + + +P
Sbjct: 119 -AAAP--SREKLLMALEALSVFLPVGVSGSSPDV------MADYKVMMI---QFRLRYPY 166
Query: 316 LMETLVHERDQYMSSTLLKV 335
L LV ER++ M+ L+ +
Sbjct: 167 LYRVLVEERNEVMARNLISI 186
>gi|449528750|ref|XP_004171366.1| PREDICTED: uncharacterized protein LOC101224962, partial [Cucumis
sativus]
Length = 123
Score = 44.7 bits (104), Expect = 0.074, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 307 QEMSKAFPTLMETLVHERDQYMSSTL--LKVATEHSSVVAVVGKGHLQGI 354
+++ ++P+L++ L+HERD Y++ +L K + VV V+G+GH+ G+
Sbjct: 13 EKLGFSYPSLLQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGV 62
>gi|340505626|gb|EGR31941.1| hypothetical protein IMG5_099690 [Ichthyophthirius multifiliis]
Length = 402
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 104/262 (39%), Gaps = 37/262 (14%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP-QNLKVPTVGEMVD--- 200
+YL+GT + S + +I KP +F++ +M QN+K + +
Sbjct: 61 LYLLGTTNSSTFLSYRTKELIAQEKPDSLFVQTNKEWWNMAKNVQNVKCQQELNLYNASF 120
Query: 201 ---------------MWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGK 245
++K K ++ ++ +WF A PG E + A EEA K
Sbjct: 121 KKAFNWNLDNSIRNIIFKSKFYSWLLVINWFKATPNDFHPFVPGLEMKFAIEEAQKLQIP 180
Query: 246 VILGD---RPVQITLRRTWEKM-PLWHKIKLLYSF--LFQAFFLPSAEDLNRMLK----- 294
V LG V I + +M PL +L Y F L +F+ D +L
Sbjct: 181 VTLGGLAIDDVSIQALKNEPRMDPL---SQLYYGFTCLHNSFWKREHYDNYNVLDVQGGE 237
Query: 295 ---EMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHL 351
E D L ++ K P + L+ ++D+ + TL + + AVV + H+
Sbjct: 238 TFAESLDRYRLNWFVKYFEKLAPYQKKILIDQKDEDIFYTLYR-NMPGKKIFAVVNQWHM 296
Query: 352 QGIKNYWKQPVPVHDLMTIPSP 373
GI+NYWK +D + +P
Sbjct: 297 PGIENYWKSATNTNDELQPINP 318
>gi|223993059|ref|XP_002286213.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977528|gb|EED95854.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 187
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 226 IFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSF--LFQAFFL 283
I PG EF A EE +ILGDR + ITLRR + + L + L + A
Sbjct: 10 ITPGEEFIRAVEEGAHVNSLIILGDRRMDITLRRLAKALVLHTDPQKLMEADRIITAKMK 69
Query: 284 PSAEDLNR---------------MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYM 328
+LN+ +++M + + E+ A P L LV ERD M
Sbjct: 70 ARMPELNKWEHTKKVLSKDEFATFVEQMKTKEATADFMSEIRNAAPELYNALVGERDIIM 129
Query: 329 --------SSTLLKV-------ATEHSSVVAVVGKGHLQGI 354
SS L V +++VAVVG GH++GI
Sbjct: 130 ARGMNTLFSSPLTSVLPPSADSKASLNTMVAVVGLGHVEGI 170
>gi|448347157|ref|ZP_21536036.1| TraB family protein [Natrinema altunense JCM 12890]
gi|445631494|gb|ELY84726.1| TraB family protein [Natrinema altunense JCM 12890]
Length = 252
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 90/235 (38%), Gaps = 37/235 (15%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLT----PQNLKV-----PTV 195
V LV + H S R V I ++P +V +EL +R L P ++ P+
Sbjct: 7 VTLVPSVHFSPTHRRRVRDTIREVEPDLVAVELDDARFERLEREVGPNRAELTRELPPSA 66
Query: 196 GEMVDMWKKKHNTFGILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQI 255
+ + T LY + ++ A E A + + L D P++
Sbjct: 67 AAAYSVVRGLQRTIVRLYGLDPER----------TDMEAAIETAAERDTDIALIDDPIEE 116
Query: 256 TLRRTWEKM-PLWHKIKLL---------YSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLV 305
T+ ++ PL +L Y+ + LP AE + DDV
Sbjct: 117 TMLALSRRLGPLTLPKAMLRLQSMGAEEYADRIELLSLPVAE-----ITSGDDV---QPA 168
Query: 306 IQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQ 360
I + + P + ++ RD+ M+ L + E +VAV+G GH GI++ +
Sbjct: 169 IDHLRRLVPEIAAVMIDRRDRSMAERLHALRREGHDIVAVIGAGHHNGIQHRLAE 223
>gi|403342176|gb|EJY70400.1| hypothetical protein OXYTRI_08850 [Oxytricha trifallax]
Length = 384
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 103/250 (41%), Gaps = 39/250 (15%)
Query: 144 DVYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCS---SRVSMLTP-------QNLKVP 193
+VYL+GT + S + + +I+ LKP VV ++ S + +L K
Sbjct: 66 EVYLIGTMNQSDMLAQRTKKLIEELKPDVVLVQTNSKWWQKAKLLQYVDSQEELNTYKTH 125
Query: 194 TVGEMVDMWKKKH-NTFGILY------SWFLAKVASHLEI-------FPGSEFRVAFEEA 239
+ MW + + N+ +++ S+F+ + SH PG E + A E A
Sbjct: 126 LNKSLAQMWIEPYWNSRKVIFLARQYFSYFMFQ--SHFRFGHDFKFWLPGLEIKYACEAA 183
Query: 240 MKYGGKV-ILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNR------- 291
K G ++ +G +T R + + + ++ ++ F D N+
Sbjct: 184 EKVGAQLQFMGSEINPVTYERMYHETRMTLLQYIVRRCMYIGTFYTRENDSNKQKIAQAG 243
Query: 292 ---MLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGK 348
++ D + Q FP + E V +RD+ + + + E +VAVV +
Sbjct: 244 PRAFTEKCLDQHQINWYTQSAEIFFPRVKEIFVDKRDEDLYTHIDNA--EGKKIVAVVNQ 301
Query: 349 GHLQGIKNYW 358
HL+GI+++W
Sbjct: 302 WHLEGIEHHW 311
>gi|397651837|ref|YP_006492418.1| pheromone shutdown protein [Pyrococcus furiosus COM1]
gi|393189428|gb|AFN04126.1| pheromone shutdown protein [Pyrococcus furiosus COM1]
Length = 203
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 86/212 (40%), Gaps = 37/212 (17%)
Query: 158 CREVEAIIDFLKPQVVFLEL-------CSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFG 210
REV I KP + LEL R + PQ LK+ +G FG
Sbjct: 1 MREVRETIIREKPDAIALELDYPRLLALLRRERLTLPQALKLGKMG-----------IFG 49
Query: 211 ILYSWFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKI 270
+ PG E A++ A G V L D+PV TL P+
Sbjct: 50 FILQELEMFFGRSFGESPGEEMIEAYKAAASLGIPVYLIDKPVNETLAGMLSSPPIE--- 106
Query: 271 KLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSS 330
KL + A LP LKE+D + +++E + FP + + LV ER+ YM+
Sbjct: 107 KLRFGIEVLASLLPGK------LKELD----YSYLMKEFREKFPHMYKVLVEERNLYMAI 156
Query: 331 TLLKVA------TEHSSVVAVVGKGHLQGIKN 356
L+++ + VVAVVG GH +GI+
Sbjct: 157 NLMRIVDSLLEKKKKVKVVAVVGLGHKKGIER 188
>gi|145348793|ref|XP_001418828.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579058|gb|ABO97121.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 436
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 15/127 (11%)
Query: 236 FEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKE 295
+ A G VI GDRP +T +R L F +E R+L
Sbjct: 184 YAAAFAVGATVIYGDRPKAVTYKRLMATPTLEE---------LDGTFAAQSERNYRLLLP 234
Query: 296 MDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA--TEHSSVVAVVGKGHLQG 353
D L + + ++ ERD+ M+ST+ + A T+ +VVAV+G H+ G
Sbjct: 235 EDH----PLAAKANERVDDCFERIIIDERDRVMASTIKECAEKTDDGTVVAVIGVDHIAG 290
Query: 354 IKNYWKQ 360
+ ++
Sbjct: 291 VSRIYRD 297
>gi|412986453|emb|CCO14879.1| predicted protein [Bathycoccus prasinos]
Length = 460
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Query: 234 VAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRML 293
+ + AM K++ DRP + T R + L L +AF S + +L
Sbjct: 202 LVYAAAMYVDAKIVFADRPKRSTYGRLVTEPTLEE--------LDEAFSKQSERNYRLLL 253
Query: 294 KEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEH-----SSVVAVVGK 348
E D + I + AF + ++ ERDQ M+S + K + +SVV VVG
Sbjct: 254 PESDKLRQECDSIITENDAF---QKYIIDERDQIMTSCIRKCVSSEDGQSANSVVVVVGA 310
Query: 349 GHLQGIKNYWK 359
H +GIK +K
Sbjct: 311 DHFEGIKKCYK 321
>gi|298705007|emb|CBJ28482.1| expressed unknown protein [Ectocarpus siliculosus]
Length = 327
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 92/255 (36%), Gaps = 57/255 (22%)
Query: 117 TKKVLPEELPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCREVEAIIDFLKPQVVFLE 176
T++ LPE + V E ++LVG H +K + VE I ++P+VV +E
Sbjct: 109 TQETLPECISNDAVSYWVHPAKES---HIWLVGVVHGAKSGVQLVEEAIGGIRPEVVMVE 165
Query: 177 LCSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFG------------ILYSWFLAKVASHL 224
L + R+ +L P G + W + G
Sbjct: 166 LDADRICVLPPGEAMETRNG--LWWWAPEEEPEGSADVDEDGDEDGEYAEDDEDVDDEEE 223
Query: 225 EIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLYSFLFQAFFLP 284
+ P E + A EA G +V+LGDR + T
Sbjct: 224 SVSPMIEIQTAVREAGACGARVLLGDRDYETT---------------------------- 255
Query: 285 SAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVA 344
R+L++ DM + + K F L + E M+ L+K+ E ++ VA
Sbjct: 256 -----GRLLEKAKRADMAS---AKERKEFNDLTTSFDCE---VMAKNLMKLRGEQTT-VA 303
Query: 345 VVGKGHLQGIKNYWK 359
V+G HL G++ K
Sbjct: 304 VIGMAHLDGVEKVLK 318
>gi|224120132|ref|XP_002318252.1| predicted protein [Populus trichocarpa]
gi|222858925|gb|EEE96472.1| predicted protein [Populus trichocarpa]
Length = 146
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSML 185
++LVGT H+S +S EVE ++ +KP V +ELC SR L
Sbjct: 92 IWLVGTTHISSQSAAEVERVVRAVKPDNVVVELCRSRQVFL 132
>gi|71663342|ref|XP_818665.1| dispersed gene family protein 1 (DGF-1) [Trypanosoma cruzi strain CL
Brener]
gi|70883929|gb|EAN96814.1| dispersed gene family protein 1 (DGF-1), putative [Trypanosoma cruzi]
Length = 3485
Score = 41.6 bits (96), Expect = 0.72, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 19/126 (15%)
Query: 125 LPRSVVILTCDSTAEGGTCDVYLVGTAHVSKESCR-------EVEAIIDFLKPQVVFLEL 177
P VV+ CD+ + C Y+ GT V + SC + + F P V L L
Sbjct: 1195 FPEGVVVFRCDTCNDDAAC--YVPGTESVDRGSCSCSCKDGWHGVSCLPFEVPDTVVLPL 1252
Query: 178 CSSRVSMLTPQNLKVPTVGEMVDMWKKKHNTFGILYS-------WFLAKVASHLEI---F 227
V T + M++MWK H G+ +S +FL + HL I F
Sbjct: 1253 PERAVDGDTSCVMNQTLTSLMLNMWKTHHCYAGVTFSGVGAVLTFFLDSMPLHLPINITF 1312
Query: 228 PGSEFR 233
G FR
Sbjct: 1313 TGCTFR 1318
>gi|219120267|ref|XP_002180876.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407592|gb|EEC47528.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 495
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 34/147 (23%)
Query: 143 CDVYLVGTAHVSKESCREVEA-IID---FLKPQ---VVFLELCSSRVSML-------TPQ 188
C+V L+G H + S +VEA ++D +P V+ LELC++R + L +
Sbjct: 133 CEVVLLGCFHGAPSSSADVEACLVDTDAHHQPNPTDVIVLELCATRFTDLRRNVLAVDEK 192
Query: 189 NLKVPTVGE-----MVDMWKKKHNTFGILYSWFLAKVASHLEIF-----------PGSEF 232
N VPT V M ++ T G W A+ L + PG EF
Sbjct: 193 NNAVPTDSASWWTWFVGMVRQTGKTRG----WSTGLAAAILGVVSGMQTALSGLEPGLEF 248
Query: 233 RVAFEEAMKYGGKVILGDRPVQITLRR 259
AF A K ++L D+PV+ TL R
Sbjct: 249 ATAFRIAAKREVDIVLADQPVEETLTR 275
>gi|154253602|ref|YP_001414426.1| ECF subfamily RNA polymerase sigma-24 factor [Parvibaculum
lavamentivorans DS-1]
gi|154157552|gb|ABS64769.1| RNA polymerase, sigma-24 subunit, ECF subfamily [Parvibaculum
lavamentivorans DS-1]
Length = 182
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 215 WFLAKVASHLEIFPGSEFRVAFEEAMKYGGKVILGDRPVQITLRRTWEKMPLWHKIKLLY 274
W++ K HL F S R A E GD VQ TL R W K W + +
Sbjct: 6 WYVEKEIPHLRRFAKSLCRSAEE-----------GDDLVQDTLERAWSKRHQWRRDGSVR 54
Query: 275 SFLFQ---AFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSST 331
S+LF+ FL S R +E+DD TL + + P + + +E MS
Sbjct: 55 SWLFRILYRLFLNSRRGTKRSPEEIDDE---TLADPKHAHTTPQEAQLMANE----MSRA 107
Query: 332 LLKVATEHSSVVAVVG 347
L + E + V ++
Sbjct: 108 LAALPHEQRAAVVLIA 123
>gi|430360877|ref|ZP_19426480.1| pheromone shutdown protein TraB [Enterococcus faecalis OG1X]
gi|429512683|gb|ELA02282.1| pheromone shutdown protein TraB [Enterococcus faecalis OG1X]
Length = 253
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 277 LFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVA 336
LF FF + L+E + D V +SK +P+L + ++ +RD+YMS+ L
Sbjct: 13 LFMTFFTEFDDIEQDKLEEYLESDSFDKVFISLSKKYPSLYQDMITDRDKYMSTKL--KN 70
Query: 337 TEHSSVVAVVGKGHLQGIK 355
V VVGK H++GIK
Sbjct: 71 NSSQVNVVVVGKAHMKGIK 89
>gi|94269186|ref|ZP_01291395.1| pheromone shutdown protein-like protein [delta proteobacterium
MLMS-1]
gi|93451317|gb|EAT02195.1| pheromone shutdown protein-like protein [delta proteobacterium
MLMS-1]
Length = 214
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 305 VIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGIKNYWKQP--- 361
++ + + P L L+ ERD Y++ + + T ++VAVVG GH+ GIK ++
Sbjct: 1 MLAALGRDLPELKRVLIDERDTYLAEKIKE--TPGQNLVAVVGAGHVAGIKAAMQRDERH 58
Query: 362 -VPVHDLMTIPSPKPAVSALK------VLSSLG 387
+P ++ TIP PA AL +L SLG
Sbjct: 59 RLP--EISTIPPLSPAWKALAWLVPVVILGSLG 89
>gi|358346687|ref|XP_003637397.1| MYB transcription factor [Medicago truncatula]
gi|355503332|gb|AES84535.1| MYB transcription factor [Medicago truncatula]
Length = 408
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 16/98 (16%)
Query: 257 LRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDLNRMLKEMDDVDMLTLVIQEMSKAFPTL 316
L+R W+ + K+ LL + + S N++ K D D +++S ++P+L
Sbjct: 234 LQRAWKALNWTQKLSLL-TIVIHGITSLSEISTNKLEKASSD-DATLQPYEQLSFSYPSL 291
Query: 317 METLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQGI 354
+ L+HERD Y+ V+GKGH+ G+
Sbjct: 292 LPPLIHERDTYLG--------------GVIGKGHMDGV 315
>gi|384246620|gb|EIE20109.1| catalase-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 563
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 314 PTLMETLVHERDQYMSSTLLKVATEHSS--VVAVVGKGHLQGI 354
P ++ L+HERD Y++ +L + + S VV VVGKGHL+G+
Sbjct: 2 PQVVGPLLHERDMYLAWSLKRSKAVNGSRCVVGVVGKGHLRGV 44
>gi|303285027|ref|XP_003061804.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457134|gb|EEH54434.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 573
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 24/104 (23%)
Query: 317 METLVHERDQYMSSTLLKVATE---HSSVVAVVGKGHLQGIKNYWKQPVPVHDLMTI--- 370
+ T++ ERDQ ++ ++ A + H VVA+VG H+ GIK +W D T
Sbjct: 323 VHTILEERDQILAHSIDLAAQDIRGHRKVVAIVGAAHVPGIKRWWDHMYHAPDESTFEAR 382
Query: 371 -------------PSP---KPAVSALKVLSSLGVAVAGVAIISG 398
P P KPA A++ + VAVAG + G
Sbjct: 383 MTESCRRVDDYVQPVPLDVKPAAGAIEHVGP--VAVAGALLFGG 424
>gi|145485355|ref|XP_001428686.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395773|emb|CAK61288.1| unnamed protein product [Paramecium tetraurelia]
Length = 411
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 98/251 (39%), Gaps = 38/251 (15%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSS------RVSMLTPQN--------L 190
+YL+G+ H S + +I+ +KP V+++ + +T Q L
Sbjct: 46 LYLIGSTHASTMLAYRTQKLINEVKPDSVYVQTNQEWWNIVKNIEGVTSQYELNAYNDVL 105
Query: 191 KVPTVGEMVDMWKKKHNT--FGILYSW-----FLAKVASHLEIF-PGSEFRVAFEEAMKY 242
+ E+ + NT + LYSW FL S F PG E + A E+A
Sbjct: 106 RGSYKWELETGVRNFRNTVFWARLYSWLGLMQFLKAFNSDFHPFIPGLEVKFAIEQARAQ 165
Query: 243 GGKVILGDRPVQ----ITLRRTWEKMPLWHKIKL-LYSFLFQAFFLPSAEDL-------- 289
G V+ G + ++L+ PL + L + L Q + +DL
Sbjct: 166 GANVVFGGLAITNDDLLSLKTEPRFDPL--SVSLNFFKLLSQVRWRRERQDLAFQLAVLG 223
Query: 290 NRMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKG 349
E D + ++ K P + LV +D + TL K T ++VAVV +
Sbjct: 224 GEQFSESVDKYRASWFVKLFEKLSPHQKKILVDRKDIEIFETLYK-HTPGKTIVAVVNQW 282
Query: 350 HLQGIKNYWKQ 360
H GI+ +W+
Sbjct: 283 HTMGIEAHWRH 293
>gi|297788023|ref|XP_002862192.1| hypothetical protein ARALYDRAFT_359775 [Arabidopsis lyrata subsp.
lyrata]
gi|297307433|gb|EFH38450.1| hypothetical protein ARALYDRAFT_359775 [Arabidopsis lyrata subsp.
lyrata]
Length = 234
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSR 181
++LVGT+H+S ES VE ++ +KP V +ELC SR
Sbjct: 85 IWLVGTSHMSSESASVVERVVRTVKPDNVAVELCRSR 121
>gi|224005841|ref|XP_002291881.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972400|gb|EED90732.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 501
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSSRVSMLTP 187
++++GTAH+S S ++ LKP VVF+EL + RV+ P
Sbjct: 176 IHILGTAHISSASAELAGTMVRELKPDVVFVELDAKRVARAIP 218
>gi|145492610|ref|XP_001432302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399413|emb|CAK64905.1| unnamed protein product [Paramecium tetraurelia]
Length = 411
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 98/250 (39%), Gaps = 36/250 (14%)
Query: 145 VYLVGTAHVSKESCREVEAIIDFLKPQVVFLELCSS------RVSMLTPQN--------L 190
+YL+G+ H S + +I+ +KP V+++ + +T Q+ L
Sbjct: 46 LYLIGSTHASTMLAYRTQKLINEVKPDSVYVQTNQEWWNIVKNIEGVTSQSELNAYNDVL 105
Query: 191 KVPTVGEMVDMWKKKHNT--FGILYSW-----FLAKVASHLEIF-PGSEFRVAFEEAMKY 242
+ ++ + N+ + LYSW FL S F PG E + A E+A
Sbjct: 106 RGAYKWQLESGVRNFRNSVFWARLYSWLGLMQFLKAFNSDFHPFIPGLEVKYAIEQARAQ 165
Query: 243 GGKVILGDRPVQ----ITLRRTWEKMPLWHKIKLLYSFLFQAFFLPSAEDL--------N 290
G V+ G + ++L+ PL + L L Q + +DL
Sbjct: 166 GANVVFGGLAITNDDLLSLKTEPRFDPLSVSLNFL-KLLSQTRWRRERQDLAFQLAVLGG 224
Query: 291 RMLKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGH 350
E D + ++ K P + LV +D + TL K T ++VAVV + H
Sbjct: 225 EQFAESVDKYRASWFVKLFEKLSPHQKKILVDRKDIEIFETLYK-HTPGKTIVAVVNQWH 283
Query: 351 LQGIKNYWKQ 360
GI+ +W+
Sbjct: 284 TMGIEAHWRH 293
>gi|430366508|ref|ZP_19427528.1| pheromone shutdown protein TraB [Enterococcus faecalis M7]
gi|429516983|gb|ELA06453.1| pheromone shutdown protein TraB [Enterococcus faecalis M7]
Length = 239
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 293 LKEMDDVDMLTLVIQEMSKAFPTLMETLVHERDQYMSSTLLKVATEHSSVVAVVGKGHLQ 352
L+E + D V +SK +P+L + ++ +RD+YMS+ L V VVGK H++
Sbjct: 15 LEEYLESDSFDKVFISLSKKYPSLYQDMITDRDKYMSTKL--KNNSSQVNVVVVGKAHMK 72
Query: 353 GIK 355
GIK
Sbjct: 73 GIK 75
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,341,246,200
Number of Sequences: 23463169
Number of extensions: 269236949
Number of successful extensions: 749032
Number of sequences better than 100.0: 747
Number of HSP's better than 100.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 746526
Number of HSP's gapped (non-prelim): 944
length of query: 405
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 260
effective length of database: 8,957,035,862
effective search space: 2328829324120
effective search space used: 2328829324120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)