BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 046408
         (102 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9LV66|Y5848_ARATH Uncharacterized protein At5g48480 OS=Arabidopsis thaliana
          GN=At5g48480 PE=1 SV=1
          Length = 166

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 33/53 (62%)

Query: 1  MKPQLLVEASKVTDAVQCYKTAFGAVEINRNMETKRKAEQELNSRLPAPFFLS 53
           K  LLVEA KV DAV  YK+AFGA+E   ++  KRK +QEL   L +   L+
Sbjct: 26 FKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA 78


>sp|Q87D01|KUP_XYLFT Probable potassium transport system protein kup OS=Xylella
           fastidiosa (strain Temecula1 / ATCC 700964) GN=kup PE=3
           SV=1
          Length = 634

 Score = 30.4 bits (67), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 49  PFFLSLTFPMILLQLRMLELLLRWAARRVGKVKDPCGFTWLI 90
           P   +   P+ L  L +L L  R+   RVGK   P  F W I
Sbjct: 148 PHMKAFVVPITLAVLILLFLCQRFGTERVGKTFGPITFLWFI 189


>sp|O14830|PPE2_HUMAN Serine/threonine-protein phosphatase with EF-hands 2 OS=Homo
           sapiens GN=PPEF2 PE=1 SV=2
          Length = 753

 Score = 30.4 bits (67), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)

Query: 7   VEASKVTDAVQCYKTAFGAVEINRNMETKRKAEQELNSRLPAPFFL--SLTFPMILLQL 63
           +E SK+   ++C        +  + ME KR+A Q+ +++ P P+FL  S + P   L+L
Sbjct: 307 IERSKIVSTMRCKTRQ----KSEKQMEEKRRANQKSSAQGPIPWFLPESRSLPSSPLRL 361


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.136    0.410 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,045,621
Number of Sequences: 539616
Number of extensions: 1050168
Number of successful extensions: 2933
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2928
Number of HSP's gapped (non-prelim): 6
length of query: 102
length of database: 191,569,459
effective HSP length: 71
effective length of query: 31
effective length of database: 153,256,723
effective search space: 4750958413
effective search space used: 4750958413
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)