Your job contains 1 sequence.
>046417
MSPQKRSSSASPPPSTNDLKQRVITCLNKLADRDTLPVATAELESIARTLTQDSFSSFLN
CLQTTDSSSKSPVRKQCVNLLTLLSRSHGDSLSPHLSKMISTVSCRLRDPDSSVRSACVA
ATTAMSLNITKPSFSVLSKPLIELILVEQDVNSQVGGAMCLAAAIDAAPNPEVEQLRKLL
PRLGKAVRIEGFKAKAAVLGVIGSVVRVGGARSKGVLDWLVPCLVEFLCCDDWATRKAAA
EVLGKVAVFDKDLATEYKRSCLAALETRRFDKVKIVRETMNRSLEMWKEVPGVCEEVSSP
SPSKSFSIDNGSSGCFPSITKSSQNVGLRTPQPKKMVPTSRSPASDSSYGTTSKTEISFK
SNNRKSGASILCKSADGKSSDWKVEIAVPRTPSSIGTCEVHNRTSDSKDAKLGEVENNVN
CQPEKKMVIYSKIRDDKMYKCGGFKSGSRVVPYSDDEMSDFVHHNGIDEDFDYPKDPEDL
SLIREQLLQIENQQSSLFDLLQRFIGSSQSGMNSLETRVHGLEMALDEISYDLALSNGRI
LNNNAAENTCCKLPGAEFLSSKFWRRAEGRSSTSRFSSSGNILPLHSGSNTLDKD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046417
(595 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2205739 - symbol:AT1G27210 species:3702 "Arabi... 1033 3.4e-143 2
TAIR|locus:2025906 - symbol:AT1G59850 "AT1G59850" species... 909 3.5e-91 1
TAIR|locus:2154144 - symbol:AT5G62580 species:3702 "Arabi... 657 1.8e-64 1
TAIR|locus:2136467 - symbol:TOR1 "TORTIFOLIA 1" species:3... 562 6.3e-54 1
TAIR|locus:2060161 - symbol:AT2G07170 species:3702 "Arabi... 487 7.4e-54 2
TAIR|locus:2036411 - symbol:AT1G50890 "AT1G50890" species... 524 7.2e-50 1
>TAIR|locus:2205739 [details] [associations]
symbol:AT1G27210 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR016024
EMBL:CP002684 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
InterPro:IPR021133 PROSITE:PS50077 ProtClustDB:CLSN2693175
EMBL:AY057540 EMBL:AY140087 EMBL:BT008391 IPI:IPI00535229
RefSeq:NP_564273.1 UniGene:At.26316 ProteinModelPortal:Q93ZH1
SMR:Q93ZH1 IntAct:Q93ZH1 PRIDE:Q93ZH1 EnsemblPlants:AT1G27210.1
GeneID:839610 KEGG:ath:AT1G27210 TAIR:At1g27210 InParanoid:Q93ZH1
OMA:IKHTISE PhylomeDB:Q93ZH1 ArrayExpress:Q93ZH1
Genevestigator:Q93ZH1 Uniprot:Q93ZH1
Length = 625
Score = 1033 (368.7 bits), Expect = 3.4e-143, Sum P(2) = 3.4e-143
Identities = 223/408 (54%), Positives = 285/408 (69%)
Query: 1 MSPQKRSSS-ASPPPSTN-DLKQRVITCLNKLADRDTLPVATAELESIARTLTQDSFSSF 58
+SP S+S +S PST DLKQRVI CLNKLADRDTL +A+AEL+SIAR LT DSFS F
Sbjct: 15 LSPSSSSTSPSSQSPSTPPDLKQRVIACLNKLADRDTLALASAELDSIARNLTHDSFSPF 74
Query: 59 LNCLQTTDSSSKSPVRKQCVNLLTLLSRSHGDSLSPHLSKMISTVSCRLRDPDSSVRSAC 118
LNC+ TDSS KSPVRKQCV LL++LSR HGDSL+PHL+KM+STV RLRDPDSSVRSAC
Sbjct: 75 LNCIHNTDSSVKSPVRKQCVALLSVLSRYHGDSLTPHLAKMVSTVIRRLRDPDSSVRSAC 134
Query: 119 VAATTAMSLNITKPSFSVLSKPLIELILVEQDVNSQVGGAMCLAAAIDAAPNPEVEQLRK 178
AT MS ++T+ F+ ++KPLIE ++ E D N Q+G A+CLAA++DAA +PE EQLRK
Sbjct: 135 AVATADMSAHVTRQPFASVAKPLIETLIQEGDSNLQIGAALCLAASVDAATDPESEQLRK 194
Query: 179 LLPRLGKAVRIEGFKAKAAVLGVIGSVVRVGGARSKGVLDWLVPCLVEFLCCDDWATRKA 238
LP++GK ++ +GFKAKAA+L +GS++ GGA +K VLDWLVP L+EFL +DWA RK+
Sbjct: 195 SLPKIGKLLKSDGFKAKAALLSAVGSIITAGGAGTKPVLDWLVPVLIEFLSSEDWAARKS 254
Query: 239 AAEVLGKVAVFDKDLATEYKRSCLAALETRRFDKVKIVRETMNRSLEMWKXXXXXXXXXX 298
AAE LGKVA + DLA++YK++C ALE+RRFDKVK VRETMNR+L +WK
Sbjct: 255 AAEALGKVATAE-DLASQYKKTCTTALESRRFDKVKSVRETMNRALNLWKEVSTDDEASL 313
Query: 299 XXXXXXXXXIDNGSSGCFPSITKSSQ-NVGLRTPQPKKMVPT-SRSPAS--DSSYGTTSK 354
D+G+ GCF S+T+SS +VGL++ +PKK+ P RSP+ + SY T +
Sbjct: 314 SPSRSST---DDGNIGCFSSVTRSSTIDVGLKSARPKKVTPIMKRSPSLPVNRSYAATRQ 370
Query: 355 TEISFKSNNRKSGASILCKSADGKSSDWKVEIAVPRTPSSIGTCEVHN 402
E K N + ++L + A S D K P SS T E N
Sbjct: 371 KENLPKRN--QGNMTMLVEEAS--SVDNKGPHFTPVKKSSEETEEKAN 414
Score = 388 (141.6 bits), Expect = 3.4e-143, Sum P(2) = 3.4e-143
Identities = 92/160 (57%), Positives = 111/160 (69%)
Query: 414 EVENNVNCQ-PEK-KMVIYSKIRDD-KMYKCGGFKSGSRVVPYSDDEMSDFVHHNGIDED 470
E E N P+ K I K R+D K+ GG +SGSRV P SDD D V N D+
Sbjct: 408 ETEEKANSGGPDIIKHTISEKSREDSKVSSFGGLRSGSRVAPCSDD--GDSVK-NCKDDV 464
Query: 471 FDYPKDPEDLSLIREQLLQIENQQSSLFDLLQRFIGSSQSGMNSLETRVHGLEMALDEIS 530
+ KD E+LSLIREQL IENQQSSL DLLQ+F+G+SQSG+ SLE+RV GLEMALDEIS
Sbjct: 465 EESKKDSEELSLIREQLALIENQQSSLLDLLQKFMGTSQSGIQSLESRVSGLEMALDEIS 524
Query: 531 YDLALSNGRILNNNA--AENTCCKLPGAEFLSSKFWRRAE 568
DLA+SNGR+ N++ A ++C KLPG EFLS KFWR+ E
Sbjct: 525 CDLAVSNGRVPRNSSGCAGDSCSKLPGTEFLSPKFWRKTE 564
>TAIR|locus:2025906 [details] [associations]
symbol:AT1G59850 "AT1G59850" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AC007258 InterPro:IPR026003 Pfam:PF12765
HOGENOM:HOG000241771 ProtClustDB:CLSN2693175 IPI:IPI00540405
PIR:F96622 RefSeq:NP_176194.1 UniGene:At.66816
ProteinModelPortal:Q9XIE4 SMR:Q9XIE4 EnsemblPlants:AT1G59850.1
GeneID:842279 KEGG:ath:AT1G59850 TAIR:At1g59850 eggNOG:NOG244611
InParanoid:Q9XIE4 OMA:IRSSPSH PhylomeDB:Q9XIE4
Genevestigator:Q9XIE4 Uniprot:Q9XIE4
Length = 498
Score = 909 (325.0 bits), Expect = 3.5e-91, P = 3.5e-91
Identities = 196/374 (52%), Positives = 254/374 (67%)
Query: 2 SPQKRSS-SASPPPST-NDLKQRVITCLNKLADRDTLPVATAELESIARTLTQDSFSSFL 59
S Q RSS S S P T DLKQRVI CLN+L+DRDTL +A AEL+SIA L+ ++FS F+
Sbjct: 3 SVQIRSSPSHSQPAMTVTDLKQRVIACLNRLSDRDTLALAAAELDSIALNLSPETFSLFI 62
Query: 60 NCLQTTDSSSKSPVRKQCVNLLTLLSRSHGDSLSPHLSKMISTVSCRLRDPDSSVRSACV 119
NCLQ+TDSS+KSPVRK CV+LL++LSRSHGDSL+PHLSKM+STV RLRDPDSSVR+ACV
Sbjct: 63 NCLQSTDSSAKSPVRKHCVSLLSVLSRSHGDSLAPHLSKMVSTVLRRLRDPDSSVRAACV 122
Query: 120 AATTAMSLNITKPSFSVLSKPLIELILVEQDVNSQVGGAMCLAAAIDAAPNPEVEQLRKL 179
AA+ M+ NIT FS+L P+IE ++ + D N+Q+ AMCLAAA+DAA P+VEQL+K
Sbjct: 123 AASVDMTTNITGQPFSILFGPMIETVIHDCDPNAQISAAMCLAAAVDAADEPDVEQLQKA 182
Query: 180 LPRLGKAVRIEGFKAKAAVLGVIGSVV-RVGGARS-KGVLDWLVPCLVEFLCCDDWATRK 237
LP++GK ++ EGFKAKA +LG IG+V+ VGG S K VLDWL+P + EFL DDW RK
Sbjct: 183 LPKIGKLLKSEGFKAKAELLGAIGTVIGAVGGRNSEKAVLDWLLPNVSEFLSSDDWRARK 242
Query: 238 AAAEVLGKVAVFDKDLATEYKRSCLAALETRRFDKVKIVRETMNRSLEMWKXXXXXXXXX 297
AAAE + +VA+ +++LA YK++CL LE+RRFDKVK+VRETMNR+L +WK
Sbjct: 243 AAAEAMARVAMVEEELAPLYKKTCLGILESRRFDKVKLVRETMNRTLGLWKQLEGDSTEV 302
Query: 298 XXXXXXXXXXID--NGSSGCFPSITKSSQNVGLRTPQPKKMVPTSRSPASDSSYGTTSKT 355
+ +SG S T ++ L TP K D+ +
Sbjct: 303 SESSSSSKSASSGLSATSGK-RSNTLKGKDRNLNTPLSSKSNDVEPLDRGDTPKDVEQEA 361
Query: 356 EISFKSNNRKS-GA 368
+S + NR + GA
Sbjct: 362 VVSKEKRNRSTLGA 375
Score = 224 (83.9 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 71/202 (35%), Positives = 105/202 (51%)
Query: 355 TEISFKSNNRKSGASILCKSADGKSSDWKVEIAVPRTPSSIGTCEVH--NRTSDSKD--- 409
TE+S S++ KS +S L ++ +S+ K + TP S + +V +R KD
Sbjct: 300 TEVSESSSSSKSASSGLSATSGKRSNTLKGKDRNLNTPLSSKSNDVEPLDRGDTPKDVEQ 359
Query: 410 -AKLGEVENNVNCQPEKKMVIYSKIRDDKMYKCGGFKSGSRVVPYSDDEMSDFVHHNGID 468
A + + + N + K+++ +K+ K+ + G KS +VV SD+E +G
Sbjct: 360 EAVVSKEKRNRSTLGAKRVLFPAKMH--KVKENGSNKS--QVVQSSDEESPKT--DSGSS 413
Query: 469 EDFDYPKDPEDLSLIREQLLQIENQQSSLFDLLQRFIGSSQSGMNSLETRVHGLEMALDE 528
+ E+LSLIR Q+ QIE QQSSL DL Q+F+ SS +GM SLE RV GLE +
Sbjct: 414 SSSQAKSNAEELSLIRHQITQIEKQQSSLLDLFQKFMESSHNGMQSLERRVRGLETSFSV 473
Query: 529 ISYDLALSNGRILNNNAAENTC 550
IS DL +S N N N C
Sbjct: 474 ISTDLLVSRSITQNGNHKRNAC 495
>TAIR|locus:2154144 [details] [associations]
symbol:AT5G62580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BT010752 IPI:IPI00527330 RefSeq:NP_201064.2
UniGene:At.19834 ProteinModelPortal:Q6NPR6 SMR:Q6NPR6
EnsemblPlants:AT5G62580.1 GeneID:836379 KEGG:ath:AT5G62580
TAIR:At5g62580 eggNOG:NOG328306 HOGENOM:HOG000241771
InParanoid:Q6NPR6 OMA:GKSENGM PhylomeDB:Q6NPR6
ProtClustDB:CLSN2693175 Genevestigator:Q6NPR6 Uniprot:Q6NPR6
Length = 615
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 172/429 (40%), Positives = 242/429 (56%)
Query: 15 STNDLKQRVITCLNKLADRDTLPVATAELESIARTLTQDSFS----SFLNCLQTTDSSSK 70
+T + KQ + L KL DRDT +A EL+ +AR + S S SF++ + + D+ K
Sbjct: 2 ATKNSKQNMSVLLTKLGDRDTFTMAARELDLMARQIDPSSSSGNLQSFISVILSVDTGDK 61
Query: 71 SPVRKQCVNLLTLLSRSHG-DSLSPHLSKMISTVSCRLRDPDSSVRSACVAATTAMSLNI 129
VRK C++LL +LS S +SLSP LSK+++ ++ RLRDPDSS+RS CVAA +A+S
Sbjct: 62 PAVRKHCIHLLAVLSVSLPLNSLSPFLSKILTRITRRLRDPDSSIRSTCVAAVSAISSRT 121
Query: 130 TKPSF-SVLSKPLIELILVEQDVNSQVGGAMCLAAAIDAAPNPEVEQL-RKLLPRLGKAV 187
TKP F S KPL + + EQ+VN+Q+G A+CLAAAID+A +P+ +L + LLPRL K V
Sbjct: 122 TKPPFYSAFMKPLADTLFTEQEVNAQIGAALCLAAAIDSASDPDPVRLGQTLLPRLEKLV 181
Query: 188 RIEGFKAKAAVLGVIGSVVRVGGAR----SKGVLDWLVPCLVEFLCCDDWATRKAAAEVL 243
+ FKAK+A + VIGSV+ GG S G L LV CL+ FL +DWA RKAAAE L
Sbjct: 182 KCNAFKAKSAGVVVIGSVIGAGGLSGTSVSSGGLKGLVDCLLSFLVSEDWAARKAAAEAL 241
Query: 244 GKVAVFDKDLATEYKRSCLAALETRRFDKVKIVRETMNRSLEMWKXXXXXXXXXXXXXXX 303
G++A +++ E+K CL E+R++DKVK VRE MN+ +E WK
Sbjct: 242 GRLATMERNELGEFKAKCLKIFESRKYDKVKAVREVMNQMMEAWKQVPDLSEEVSPPRSN 301
Query: 304 XXXXIDNGSSGCFPSITKSSQNVGLRTPQPKKMVPTSRSPASDSSYGTTSKTEISFKSNN 363
D S G +PS VG TP + +RS SS TT++ + + KS +
Sbjct: 302 ASSKGD-ASDGRYPS----GSRVG-STPAKSRTHLVNRSTPPGSSLATTARKQANRKSID 355
Query: 364 RK--SGASILCKSADGKSSDWKVEIAVPRTPSSIGT---CEVHNR----TSDSKD---AK 411
+K S + L K + +WK A T S+ C+ H+ TS S K
Sbjct: 356 QKKTSLTASLTKPNVRRRLEWKAGGASIPTGVSLEDEQHCD-HDENAKETSHSSHNTVQK 414
Query: 412 LGEVENNVN 420
LG V +++N
Sbjct: 415 LGGVSSSLN 423
Score = 343 (125.8 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 90/246 (36%), Positives = 133/246 (54%)
Query: 333 PKKMVPTSRSPASDSSY------GTT-SKTEISFKSNNRKSGASILC---KSADGKSSDW 382
P + +S+ ASD Y G+T +K+ + + G+S+ K A+ KS D
Sbjct: 297 PPRSNASSKGDASDGRYPSGSRVGSTPAKSRTHLVNRSTPPGSSLATTARKQANRKSIDQ 356
Query: 383 K-VEIAVPRTPSSIGTCEVHNRTSDSKDAKLGEVENNVNCQPEKKMVIYSKIRDDKMYKC 441
K + T ++ + + + +E+ +C ++ S + + K
Sbjct: 357 KKTSLTASLTKPNVRR-RLEWKAGGASIPTGVSLEDEQHCDHDENAKETSHSSHNTVQKL 415
Query: 442 GGFKSG-SRVVPYSDDEMSDFVHHNGIDEDFDYPKDPEDLSLIREQLLQIENQQSSLFDL 500
GG S + +P S M H + + + K ED+SLIR QL+QIE QQ++L DL
Sbjct: 416 GGVSSSLNGNIPPSGATMVTGHHVLSENPNSNNCKGLEDISLIRNQLVQIEQQQANLMDL 475
Query: 501 LQRFIGSSQSGMNSLETRVHGLEMALDEISYDLALSNGRILNNNAAENTCCKLPGAEFLS 560
LQRF+GSSQ GM LETRVHGLE+ALDEISYDLA+SNGR ++N ++ N CC LP F+
Sbjct: 476 LQRFVGSSQHGMRGLETRVHGLELALDEISYDLAVSNGR-MSNGSSRNNCCLLPSGSFIK 534
Query: 561 SKFWRR 566
SKFW++
Sbjct: 535 SKFWKK 540
>TAIR|locus:2136467 [details] [associations]
symbol:TOR1 "TORTIFOLIA 1" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISM] [GO:0007275
"multicellular organismal development" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0010031
"circumnutation" evidence=IMP] [GO:0008017 "microtubule binding"
evidence=IDA] [GO:0010005 "cortical microtubule, transverse to long
axis" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
InterPro:IPR016024 GO:GO:0007275 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 EMBL:AL035680 EMBL:AL161566
GO:GO:0009826 GO:GO:0008017 GO:GO:0010031 GO:GO:0010005
EMBL:AB176521 EMBL:AJ249836 EMBL:BT006451 IPI:IPI00530987
PIR:T06036 RefSeq:NP_194436.2 UniGene:At.32124
ProteinModelPortal:Q9T041 SMR:Q9T041 IntAct:Q9T041 STRING:Q9T041
PaxDb:Q9T041 PRIDE:Q9T041 EnsemblPlants:AT4G27060.1 GeneID:828814
KEGG:ath:AT4G27060 TAIR:At4g27060 eggNOG:NOG291487
HOGENOM:HOG000029994 InParanoid:Q9T041 OMA:GGSHDSM PhylomeDB:Q9T041
ProtClustDB:CLSN2680449 Genevestigator:Q9T041 GermOnline:AT4G27060
Uniprot:Q9T041
Length = 864
Score = 562 (202.9 bits), Expect = 6.3e-54, P = 6.3e-54
Identities = 182/582 (31%), Positives = 285/582 (48%)
Query: 18 DLKQRVITCLNKLADRDTLPVATAELESIARTLTQDSFSSFLNCLQTTDSSSKSPVRKQC 77
+LKQ+++T ++KLADRDT +A +LE ++LT ++ FLNCL + S K V+K+C
Sbjct: 41 ELKQKILTSISKLADRDTYQIAVEDLEKTIQSLTPETLPMFLNCLYDSCSDPKPAVKKEC 100
Query: 78 VNLLTLLSRSHGDSLSPHLSKMISTVSCRLRDPDSSVRSAC---VAATTAMSL------- 127
++LL+ + H DS + HL+K+I+ + RL+D DS VR AC + A + + L
Sbjct: 101 LHLLSYVCSLHCDSTAAHLTKIIAQIVKRLKDSDSGVRDACRDTIGALSGIYLKGKEEGT 160
Query: 128 NITKPSFSV--LSKPLIELILVEQDVNSQVGGAMCLAAAIDAAPNPEVEQLRKLLPRLGK 185
N S +V KPL E + EQ+ Q G +MC+A +++A +P V +KL PR+ K
Sbjct: 161 NTGSASLAVGLFVKPLFEA-MGEQNKVVQSGASMCMARMVESAASPPVTSFQKLCPRICK 219
Query: 186 AVRIEGFKAKAAVLGVIGSVVRVGGARSKGVLDWLVPCLVEFLCCDDWATRKAAAEVLGK 245
+ F AKA++L V+ S+ +VG + L+ L+ + + L DW TRKAAAE L
Sbjct: 220 LLSNSSFLAKASLLPVVSSLSQVGAIAPQS-LESLLESIHDCLGSTDWVTRKAAAETLTA 278
Query: 246 VAVFDKDLATEYKRSCLAALETRRFDKVKIVRETMNRSLEMWKXXXXXXXXXXXXXXXXX 305
+A L E S + LET RFDK+K VRE++ +L++WK
Sbjct: 279 LASHSSGLIKEKTDSTITVLETCRFDKIKPVRESVTEALQLWKKISGKY----------- 327
Query: 306 XXIDNGSSGCFPSITKSSQNVGLRTPQPKK--MVPTSRSPASDSSYGTTSKTEISF-KSN 362
+D S S +S+ +G K+ + + ASD S T S S K
Sbjct: 328 --VDGASDD---SKLSASEQLGSEKNGEKRSNLADLMKKEASDGS--TLSPDSASKGKGC 380
Query: 363 NRKSGASILCKSADGKSS-DWKVEI--AVPRTPSSIGTCEVHNRTSDSKDAKLGEVENNV 419
+ +L K A S D+ E + R S + +D +++ L ++ N +
Sbjct: 381 FPEKAVGLLKKKAPVLSDKDFNPEFFQRLERRQSVEVVVPRRCKNNDEEESGLDDL-NAM 439
Query: 420 NCQPEKKMVIYSKIRDDKMYKCGGFKSGSRVVPYSDDEMSDFV-------HH---NGIDE 469
K + DDK K G F S D+ + V HH + D
Sbjct: 440 GSSNRLK----NTQADDKQVK-GRFDGNGSQARTSGDDKAGVVNGKETPGHHAPVSNTDN 494
Query: 470 DFD--YPKDPEDLSLIREQLLQIENQQSSLFDLLQRFIGSSQSGMNSLETRVHGLEMALD 527
+ + + + S I+ QLLQ+E QQ++L ++LQ FIG S M +LE RV GLE ++
Sbjct: 495 QSEGSFTSNRGNWSAIQRQLLQLERQQTNLMNMLQEFIGGSHDSMVTLEGRVRGLERIVE 554
Query: 528 EISYDLALSNGRILNNNAAENTCCKLPGAEFLSSKFWRRAEG 569
+++ DL++S+GR N A A + + K+ RA G
Sbjct: 555 DMARDLSISSGRRANLTAGFGKYNSF--ANYPTGKYNGRAPG 594
>TAIR|locus:2060161 [details] [associations]
symbol:AT2G07170 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=RCA] [GO:0006270 "DNA
replication initiation" evidence=RCA] [GO:0006275 "regulation of
DNA replication" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0007017 "microtubule-based
process" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0016458 "gene silencing" evidence=RCA]
[GO:0031048 "chromatin silencing by small RNA" evidence=RCA]
[GO:0034968 "histone lysine methylation" evidence=RCA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA] [GO:0051726 "regulation
of cell cycle" evidence=RCA] InterPro:IPR000357 InterPro:IPR016024
Pfam:PF02985 EMBL:CP002685 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 IPI:IPI00530465 RefSeq:NP_178730.2
UniGene:At.41010 ProteinModelPortal:F4IK92 SMR:F4IK92 PRIDE:F4IK92
EnsemblPlants:AT2G07170.1 GeneID:815286 KEGG:ath:AT2G07170
OMA:SAVRKEC Uniprot:F4IK92
Length = 820
Score = 487 (176.5 bits), Expect = 7.4e-54, Sum P(2) = 7.4e-54
Identities = 136/402 (33%), Positives = 200/402 (49%)
Query: 18 DLKQRVITCLNKLADRDTLPVATAELESIARTLTQDSFSSFLNCLQTTDSSSKSPVRKQC 77
+LK++V+ LNKLADRDT ELE L D S FL+C+ TDS KS VRK+C
Sbjct: 26 ELKKKVVIALNKLADRDTYQRGVDELEKTVEHLAPDKVSCFLSCILDTDSEQKSAVRKEC 85
Query: 78 VNLLTLLSRSHGDSLSPHLSKMISTVSCRLRDPDSSVRSACVAATTAMSLNIT---KPSF 134
+ L+ L+R H + P+L KM+S++ RL+DPDS VR AC+ ++ ++ +F
Sbjct: 86 IRLMGTLARFHEGLVGPYLGKMVSSIVKRLKDPDSVVRDACIETMGVLASKMSCYEDQNF 145
Query: 135 SV---LSKPLIELILVEQDVNSQVGGAMCLAAAIDAAPNPEVEQLRKLLPRLGKAVRIEG 191
V L KPL E I +Q+ Q G A+CLA ID++P V ++++L R K +
Sbjct: 146 GVFVSLVKPLFEAI-GDQNKYVQSGAALCLARVIDSSPEAPVAIIQRMLMRTVKLLNNSH 204
Query: 192 FKAKAAVLGVIGSVVRVGGARSKGVLDWLVPCLVEFLCCDDWATRKAAAEVLGKVAVFDK 251
F AK AV+ + S++ GGA SK VL + + L DW TRKAA+ L ++A +
Sbjct: 205 FIAKPAVIELNRSIILAGGATSKSVLSSAMSSFQDALKNKDWTTRKAASVALMEIAATGE 264
Query: 252 DLATEYKRSCLAALETRRFDKVKIVRETMNRSLEMWKXXXXXXXXXXXXXXXXXXXIDNG 311
K SC+ +LE+ RFDKVK VR+++ +L+ WK NG
Sbjct: 265 KFLGPLKASCICSLESCRFDKVKPVRDSVILALKYWKGVPGSDSPEPSETESSVKESYNG 324
Query: 312 ---SSGCFPSI---TKSSQNVGLRTPQPKKMVPTS-RSPASDSSYGTTSKTEISFKSNNR 364
SS F + K ++ T +K VP S R P + + + R
Sbjct: 325 ARESSELFSTSDFKVKDGMSIKYVTDVTRKKVPVSARQPPT------------RYNDDPR 372
Query: 365 KSGASILCKSADGKSSDWKVEIAVPRTPSSIGTCEVHNRTSD 406
KS DW +EIAVP + S + +++N S+
Sbjct: 373 KSN-----------QDDWHIEIAVPES-SFVSKVDLYNEESE 402
Score = 100 (40.3 bits), Expect = 7.4e-54, Sum P(2) = 7.4e-54
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 475 KDPEDLSLIREQLLQIENQQSSLFDLLQRFIGSSQSGMNSLETRVHGLEMALDEISYDLA 534
K +++ +R+QL IEN+QS L D LQ F + + L+++V LE A++ I+ + A
Sbjct: 509 KIANEMASVRKQLSDIENKQSRLIDQLQVFSTGIMNNFSVLQSKVSSLEYAVEGIAQNAA 568
Query: 535 LSNGRILNNN 544
L + I N+N
Sbjct: 569 LHSD-ISNSN 577
Score = 37 (18.1 bits), Expect = 3.1e-47, Sum P(2) = 3.1e-47
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 428 VIYSKIRDDKMYKCGGFKSGSRVVPYSDDEMSDFVHHN 465
V+ SK+ + Y G + + +SD S+FV HN
Sbjct: 548 VLQSKVSSLE-YAVEGIAQNAAL--HSDISNSNFVKHN 582
>TAIR|locus:2036411 [details] [associations]
symbol:AT1G50890 "AT1G50890" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR016024 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005874
EMBL:AC079284 HOGENOM:HOG000029994 IPI:IPI00521044 PIR:H96545
RefSeq:NP_175502.2 UniGene:At.37931 ProteinModelPortal:F4I6M4
PRIDE:F4I6M4 EnsemblPlants:AT1G50890.1 GeneID:841511
KEGG:ath:AT1G50890 TAIR:At1g50890 eggNOG:NOG272349
InParanoid:Q9C6J1 OMA:MISLENR Uniprot:F4I6M4
Length = 821
Score = 524 (189.5 bits), Expect = 7.2e-50, P = 7.2e-50
Identities = 163/559 (29%), Positives = 269/559 (48%)
Query: 6 RSSSA-SPPPSTNDLKQRVITCLNKLADRDTLPVATAELESIARTL--TQDSFSSFLNCL 62
RSS A S + +LKQR++T L++L DRDT +A +LE I ++ + + L+CL
Sbjct: 23 RSSVAVSSHSAMVELKQRILTSLSRLGDRDTYQIAVDDLEKIVVSVPDSPEILPVLLHCL 82
Query: 63 QTTDSSSKSPVRKQCVNLLTLLSRSHGDSLSPHLSKMISTVSCRLRDPDSSVRSACVAAT 122
+ S K+PV+++ + LL+ L S+ D L+K+IS + RL+D D+ VR AC A
Sbjct: 83 FDSSSDLKAPVKRESIRLLSFLCLSYTDLSFSQLAKIISHIVKRLKDADNGVRDACRDAI 142
Query: 123 TAMSLNITKPS------------FSVLSKPLIELILVEQDVNSQVGGAMCLAAAIDAAPN 170
++S K + +KPL E + EQ+ + Q G A+C+ ID+A
Sbjct: 143 GSLSAQFLKEKEVENGNYVGSSLVGLFAKPLFEA-MAEQNKSLQSGAAICMGKMIDSATE 201
Query: 171 PEVEQLRKLLPRLGKAVRIEGFKAKAAVLGVIGSVVRVGGARSKGVLDWLVPCLVEFLCC 230
P V +KL PR+ K + + KA++L V+GS+ +VG + L+ L+ + E L C
Sbjct: 202 PPVAAFQKLCPRISKLLNSPNYITKASLLPVVGSLSQVGAIAPQS-LESLLHSIHECLGC 260
Query: 231 DDWATRKAAAEVLGKVAVFDKDLATEYKRSCLAALETRRFDKVKIVRETMNRSLEMWKXX 290
+W TRKAAA+VL +AV L + S L ALE RFDK+K VRE+++ +L +WK
Sbjct: 261 TNWVTRKAAADVLISLAVHSSSLVADKTDSTLTALEACRFDKIKPVRESLSEALNVWKNI 320
Query: 291 XXXXXXXXXXXXXXXXXIDNGSSGCFPSITKSSQNVGLRTPQPKKMVPTSRSPASDSSYG 350
D S C + ++ + + + ++ S S SS
Sbjct: 321 AGKGESGTMDDQK-----DVSSEQCI--LERNGETDSVSCEEAGLVMQGSCDGLSSSSDS 373
Query: 351 TTSKTEISFKSNNRKSGASI----LCKSADGKSSDWKVEIAVPRTPSSIGTCEVHNRTSD 406
+ I K R +G + K S D VE+ +P + ++ T D
Sbjct: 374 ISKAVLILRKKAPRLTGKDLNPEFFQKLEKRGSGDMPVEVILPSRQKNSS----NSNTED 429
Query: 407 SKDAKLGEVENNVN--CQP---EKKMVIYSKIRDDKMY--KCGGFKSGSRVVPYSDDEMS 459
DA + + N C+ K + +K + G +S R D + +
Sbjct: 430 ESDANTSVLRSRSNGLCRTAGVHTKQRHFGDFAREKWVDERMNGGESRLRAF---DGDHT 486
Query: 460 DFVHHNGIDEDFDYPKDPEDLSLIREQLLQIENQQSSLFDLLQRFIGSSQSGMNSLETRV 519
+ + + + ++P P ++ QLL +E QQ+ + ++LQ F+G S GM SLE RV
Sbjct: 487 EVIQADTSENRGNWP--P-----LQRQLLHLERQQTHIMNMLQDFMGGSHDGMISLENRV 539
Query: 520 HGLEMALDEISYDLALSNG 538
GLE ++E+S ++++ +G
Sbjct: 540 RGLERIVEEMSREMSIQSG 558
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.129 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 595 566 0.00079 120 3 11 23 0.43 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 621 (66 KB)
Total size of DFA: 302 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.20u 0.10s 53.30t Elapsed: 00:00:03
Total cpu time: 53.20u 0.10s 53.30t Elapsed: 00:00:03
Start: Sat May 11 11:04:46 2013 End: Sat May 11 11:04:49 2013