BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046417
(595 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4I6M4|SP2L_ARATH Microtubule-associated protein SPIRAL2-like OS=Arabidopsis thaliana
GN=SP2L PE=2 SV=1
Length = 821
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 165/292 (56%), Gaps = 16/292 (5%)
Query: 18 DLKQRVITCLNKLADRDTLPVATAELESIARTL--TQDSFSSFLNCLQTTDSSSKSPVRK 75
+LKQR++T L++L DRDT +A +LE I ++ + + L+CL + S K+PV++
Sbjct: 36 ELKQRILTSLSRLGDRDTYQIAVDDLEKIVVSVPDSPEILPVLLHCLFDSSSDLKAPVKR 95
Query: 76 QCVNLLTLLSRSHGDSLSPHLSKMISTVSCRLRDPDSSVRSACVAATTAMSLNITKPS-- 133
+ + LL+ L S+ D L+K+IS + RL+D D+ VR AC A ++S K
Sbjct: 96 ESIRLLSFLCLSYTDLSFSQLAKIISHIVKRLKDADNGVRDACRDAIGSLSAQFLKEKEV 155
Query: 134 ----------FSVLSKPLIELILVEQDVNSQVGGAMCLAAAIDAAPNPEVEQLRKLLPRL 183
+ +KPL E + EQ+ + Q G A+C+ ID+A P V +KL PR+
Sbjct: 156 ENGNYVGSSLVGLFAKPLFE-AMAEQNKSLQSGAAICMGKMIDSATEPPVAAFQKLCPRI 214
Query: 184 GKAVRIEGFKAKAAVLGVIGSVVRVGGARSKGVLDWLVPCLVEFLCCDDWATRKAAAEVL 243
K + + KA++L V+GS+ +VG A + L+ L+ + E L C +W TRKAAA+VL
Sbjct: 215 SKLLNSPNYITKASLLPVVGSLSQVG-AIAPQSLESLLHSIHECLGCTNWVTRKAAADVL 273
Query: 244 GKVAVFDKDLATEYKRSCLAALETRRFDKVKIVRETMNRSLEMWKEVPGVCE 295
+AV L + S L ALE RFDK+K VRE+++ +L +WK + G E
Sbjct: 274 ISLAVHSSSLVADKTDSTLTALEACRFDKIKPVRESLSEALNVWKNIAGKGE 325
>sp|Q9T041|MAPT_ARATH Microtubule-associated protein TORTIFOLIA1 OS=Arabidopsis thaliana
GN=TOR1 PE=1 SV=2
Length = 864
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 168/287 (58%), Gaps = 14/287 (4%)
Query: 18 DLKQRVITCLNKLADRDTLPVATAELESIARTLTQDSFSSFLNCLQTTDSSSKSPVRKQC 77
+LKQ+++T ++KLADRDT +A +LE ++LT ++ FLNCL + S K V+K+C
Sbjct: 41 ELKQKILTSISKLADRDTYQIAVEDLEKTIQSLTPETLPMFLNCLYDSCSDPKPAVKKEC 100
Query: 78 VNLLTLLSRSHGDSLSPHLSKMISTVSCRLRDPDSSVRSACVAATTAMS----------L 127
++LL+ + H DS + HL+K+I+ + RL+D DS VR AC A+S
Sbjct: 101 LHLLSYVCSLHCDSTAAHLTKIIAQIVKRLKDSDSGVRDACRDTIGALSGIYLKGKEEGT 160
Query: 128 NITKPSFSV--LSKPLIELILVEQDVNSQVGGAMCLAAAIDAAPNPEVEQLRKLLPRLGK 185
N S +V KPL E + EQ+ Q G +MC+A +++A +P V +KL PR+ K
Sbjct: 161 NTGSASLAVGLFVKPLFE-AMGEQNKVVQSGASMCMARMVESAASPPVTSFQKLCPRICK 219
Query: 186 AVRIEGFKAKAAVLGVIGSVVRVGGARSKGVLDWLVPCLVEFLCCDDWATRKAAAEVLGK 245
+ F AKA++L V+ S+ +V GA + L+ L+ + + L DW TRKAAAE L
Sbjct: 220 LLSNSSFLAKASLLPVVSSLSQV-GAIAPQSLESLLESIHDCLGSTDWVTRKAAAETLTA 278
Query: 246 VAVFDKDLATEYKRSCLAALETRRFDKVKIVRETMNRSLEMWKEVPG 292
+A L E S + LET RFDK+K VRE++ +L++WK++ G
Sbjct: 279 LASHSSGLIKEKTDSTITVLETCRFDKIKPVRESVTEALQLWKKISG 325
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 479 DLSLIREQLLQIENQQSSLFDLLQRFIGSSQSGMNSLETRVHGLEMALDEISYDLALSNG 538
+ S I+ QLLQ+E QQ++L ++LQ FIG S M +LE RV GLE +++++ DL++S+G
Sbjct: 506 NWSAIQRQLLQLERQQTNLMNMLQEFIGGSHDSMVTLEGRVRGLERIVEDMARDLSISSG 565
Query: 539 RILNNNAAENTCCKLPGAEFLSSKFWRRAEG 569
R N A A + + K+ RA G
Sbjct: 566 RRANLTAGFGKYNSF--ANYPTGKYNGRAPG 594
>sp|Q23495|HEAT1_CAEEL HEAT repeat-containing protein 1 homolog OS=Caenorhabditis elegans
GN=toe-1 PE=2 SV=1
Length = 1650
Score = 40.4 bits (93), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 53 DSFSSFLNCLQTTDSSSKSPVRKQCVNLLTLLSRSHGDSLSPHLSKMISTVSCRLRDPDS 112
DSF LN + S++ +R + + +L LL + GD + PHLS ++ ++ + D +
Sbjct: 1563 DSFPELLNKIMLKTRDSRAKIRYRALIVLELLIKEIGDGVQPHLSILLPFLNELIEDENK 1622
Query: 113 SVRSAC 118
V + C
Sbjct: 1623 QVEAQC 1628
>sp|Q10178|SF3B1_SCHPO U2 snRNP component prp10 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=prp10 PE=1 SV=3
Length = 1205
Score = 36.2 bits (82), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 73/166 (43%), Gaps = 9/166 (5%)
Query: 89 GDSLSPHLSKMISTVSCRLRDPDSSVRSACVAATTAMSLNITKPSFSVLSKPLIELILVE 148
G P+L +++ST+ RL + ++VR +++++ + L + L ++L E
Sbjct: 823 GTRCKPYLPQIVSTILYRLNNKSANVREQAADLVSSITIVLKACGEEALMRKL-GVVLYE 881
Query: 149 ---QDVNSQVGGAMCLAAAIDAAPNPEVEQ--LRKLLPRLGKAVRIEGFKAKAAVLGVIG 203
++ +G + AI + Q +R LLPRL +R K + + ++G
Sbjct: 882 YLGEEYPEVLGSILGAIKAIVSVVGMSSMQPPIRDLLPRLTPILRNRHEKVQENTIDLVG 941
Query: 204 SVVRVGGARSKGVLDWLVPC--LVEFLCCDDWATRKAAAEVLGKVA 247
+ G+ +W+ C L++ L + R+AA G ++
Sbjct: 942 KIAD-RGSEYVSAREWMRICFELIDMLKAHKKSIRRAAVNTFGYIS 986
>sp|Q55CQ7|TNPO_DICDI Transportin OS=Dictyostelium discoideum GN=tnpo PE=3 SV=1
Length = 931
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 63 QTTDSSSKSPVRKQCVNLLTLLSRSHGDSLSPHLSKMISTVSCRLRDPDSSVRSACVAAT 122
Q + + PVR+ + L ++ + L+PHLSK+I + L DP VRS
Sbjct: 437 QRMNEQNPWPVRESAILALGAIADGSKNGLAPHLSKVIPYLINTLNDPKPLVRSITCWTL 496
Query: 123 TAMSLNITKPSFSVLSKPLIELILVE-QDVNSQVGGAMCLAAA 164
+ S I + PL+ +L D N +V A C A A
Sbjct: 497 SRYSYWIAQADGRDYLHPLVVNLLNRIVDNNKKVQEAACSAFA 539
>sp|Q54WR2|GCN1L_DICDI Translational activator gcn1 OS=Dictyostelium discoideum GN=gcn1l1
PE=3 SV=1
Length = 2667
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Query: 39 ATAELESIARTLTQDSFSSFLNCLQTTDSSSKSPVRKQCVNLLTLLSRSHGDSLSPHLSK 98
A L + +L F+S +N L +S + VR+ +++ S GD P+L K
Sbjct: 1715 AAQGLSEVLASLDISRFNSLINELLAMTNSPRPHVREGILSIFIFTPISLGDLFLPYLPK 1774
Query: 99 MISTVSCRLRDPDSSVRSACVAATTAMSLNITKPSFSVLSKPLIELILVEQD 150
++ V L D VR C+ ++ L V+ P +E +L ++
Sbjct: 1775 VLPQVLKGLADDSDPVREVCMRCGQSIVLQFAVTGIEVIV-PALEKVLFHEN 1825
Score = 33.1 bits (74), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 89/237 (37%), Gaps = 42/237 (17%)
Query: 47 ARTLTQDSFSSFLNCLQTTDSSSKSPVRKQ-CVNLLTLLSRSHGDSLSPHLSKMISTVSC 105
T+ S S L L+ T S ++K C + L S + L P+L+ ++ +
Sbjct: 1604 VHTIDPASLSLLLPILERTLKERSSELKKMSCQIVGNLCSLTEPKDLVPYLNILMPVMKT 1663
Query: 106 RLRDPDSSVRSACVAATTAMSLNITKPSFSVLSKPLIELILVEQDVNSQVGGAMCLA--- 162
L DP VR+ C A + + + +FS L L+E + +Q + G A L+
Sbjct: 1664 VLLDPIPEVRAICARALGLLVRGMGEENFSTLIPWLLETVKSDQGAVERSGAAQGLSEVL 1723
Query: 163 ---------------AAIDAAPNPEVEQ--------------------LRKLLPRLGKAV 187
A+ +P P V + L K+LP++ K +
Sbjct: 1724 ASLDISRFNSLINELLAMTNSPRPHVREGILSIFIFTPISLGDLFLPYLPKVLPQVLKGL 1783
Query: 188 RIEGFKAKAAVLGVIGSVVRVGGARSKGVLDWLVPCLVEFLCCDDWATRKAAAEVLG 244
+ + + S+V ++ +VP L + L ++W R + ++ G
Sbjct: 1784 ADDSDPVREVCMRCGQSIVLQFAVTG---IEVIVPALEKVLFHENWRIRLSCVQLFG 1837
>sp|Q99LG2|TNPO2_MOUSE Transportin-2 OS=Mus musculus GN=Tnpo2 PE=2 SV=1
Length = 887
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 19/129 (14%)
Query: 19 LKQRVITCLNK-LADRDTLPVATAELESIARTLTQDSFSSFLNCLQTTDSSSKSPVRKQC 77
++ I C+N+ + DR A A +++I D+F L L D VRK
Sbjct: 188 IRSHAIACVNQFIMDR-----AQALMDNI------DTFIEHLFALAVDDDPE---VRKNV 233
Query: 78 VNLLTLLSRSHGDSLSPHLSKMISTVSCRLRDPDSSVR-SACVAATTAMSLNITKPSFSV 136
L +L D L PH+ +I + R +D D +V AC T I K V
Sbjct: 234 CRALVMLLEVRIDRLIPHMHSIIQYMLQRTQDHDENVALEACEFWLTLAEQPICK---EV 290
Query: 137 LSKPLIELI 145
L+ L++LI
Sbjct: 291 LASHLVQLI 299
>sp|O14787|TNPO2_HUMAN Transportin-2 OS=Homo sapiens GN=TNPO2 PE=1 SV=3
Length = 897
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 19/129 (14%)
Query: 19 LKQRVITCLNK-LADRDTLPVATAELESIARTLTQDSFSSFLNCLQTTDSSSKSPVRKQC 77
++ I C+N+ + DR A A +++I D+F L L D VRK
Sbjct: 188 IRSHAIACVNQFIMDR-----AQALMDNI------DTFIEHLFALAVDDDPE---VRKNV 233
Query: 78 VNLLTLLSRSHGDSLSPHLSKMISTVSCRLRDPDSSVR-SACVAATTAMSLNITKPSFSV 136
L +L D L PH+ +I + R +D D +V AC T I K V
Sbjct: 234 CRALVMLLEVRIDRLIPHMHSIIQYMLQRTQDHDENVALEACEFWLTLAEQPICK---EV 290
Query: 137 LSKPLIELI 145
L+ L++LI
Sbjct: 291 LASHLVQLI 299
>sp|Q92616|GCN1L_HUMAN Translational activator GCN1 OS=Homo sapiens GN=GCN1L1 PE=1 SV=6
Length = 2671
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 15/159 (9%)
Query: 26 CLNKLADRDTLPVATAELESIARTLTQDSFSSFLNCLQTTDSSSKSPVRKQCVNLL-TLL 84
CL L D + A ++ + Q +F ++TD+ RK ++ +
Sbjct: 1595 CLQTLLDTKFVHFIDAPSLALIMPIVQRAFQD-----RSTDT------RKMAAQIIGNMY 1643
Query: 85 SRSHGDSLSPHLSKMISTVSCRLRDPDSSVRSACVAATTAMSLNITKPSFSVLSKPLIEL 144
S + L+P+L + + L DP VR+ A AM + + F L L+E
Sbjct: 1644 SLTDQKDLAPYLPSVTPGLKASLLDPVPEVRTVSAKALGAMVKGMGESCFEDLLPWLMET 1703
Query: 145 ILVEQDVNSQVGGAMCLAAAIDAAPNPEVEQLRKLLPRL 183
+ EQ + G A LA + VE+L KL+P +
Sbjct: 1704 LTYEQSSVDRSGAAQGLA---EVMAGLGVEKLEKLMPEI 1739
>sp|Q6P5H6|FRMD5_MOUSE FERM domain-containing protein 5 OS=Mus musculus GN=Frmd5 PE=2 SV=1
Length = 517
Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 26/119 (21%)
Query: 43 LESIARTLTQDSFSSFLNCLQTT-DSSSKSPVRKQCVNLLTLLSRSHGDSLSPHLSKMIS 101
L S+ RT + S + L++ DS+ +PVR S SHGD+ PH+
Sbjct: 361 LSSVPRTRRRAVHISIMEGLESLRDSAHSTPVR----------SSSHGDTFLPHV----- 405
Query: 102 TVSCRLRDPDSSVRSACVAATTAMSLNITKPSFSVLSKPLIELILVEQDVNSQVGGAMC 160
R DS+ R A +A P+ SVL P+ E L ++ Q+ GA C
Sbjct: 406 ----RSSRADSNERVAVIAD------EAYSPADSVLPTPVAEHSLELMLLSRQINGATC 454
>sp|B7VM97|PLSB_VIBSL Glycerol-3-phosphate acyltransferase OS=Vibrio splendidus (strain
LGP32) GN=plsB PE=3 SV=1
Length = 807
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 14 PSTNDLKQRVITCLNKLADRDTLPV-ATAELESIARTLTQDSFSSFLNC 61
P NDL +++T +N A + L + ATA L S R L++DS S +NC
Sbjct: 503 PVVNDLATKMMTHINDAAATNALTLCATALLASRQRALSRDSLVSQINC 551
>sp|O94489|EF3_SCHPO Elongation factor 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=tef3 PE=1 SV=1
Length = 1047
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 67/150 (44%), Gaps = 8/150 (5%)
Query: 52 QDSFSSFLNCLQTTDSSSKSPVRKQCVNLLTLLSRSHGD---SLSPHLSKMISTVSCRLR 108
QD+ S + + + + R++ + L ++ +HG + P+L +++ V ++
Sbjct: 47 QDAPSQVFSAISKQLNDKNATARERVLKGLEAVA-NHGSVAADVEPYLVELLPAVIAKVA 105
Query: 109 DPDSSVRSACVAATTAMSLNITKPSFSVLSKPLIELILVEQDVNSQVGGAMCLAAAIDAA 168
D ++VR A +AA+ A+ T + + ++E I N ++ L ++ A
Sbjct: 106 DKQNAVRDAAIAASKAIVRCTTPYAVKAIVPSVLESIHTTGKWNEKMNSLQLLDVLVEVA 165
Query: 169 PNPEVEQLRKLLPRLGKAVRIEGFKAKAAV 198
P+ QL LP++ V + KA V
Sbjct: 166 PS----QLSYSLPQIIPVVSESMWDTKAEV 191
>sp|Q6CX49|VAC8_KLULA Vacuolar protein 8 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS
2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=VAC8 PE=3 SV=3
Length = 579
Score = 33.9 bits (76), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 87/238 (36%), Gaps = 31/238 (13%)
Query: 30 LADRDTLPVATAELESIARTLTQDSFSSFLNCLQTTDSSSKSPVRKQCVNLLTL------ 83
L D LP+A E E++ S FL D S P+R L TL
Sbjct: 14 LEDSTGLPIAENEREAVT------SLLEFLENKDQYDFYSGKPLRA----LTTLVYSDNL 63
Query: 84 -LSRSHGDSLSPHLSKMISTVS--------CRLRDPDSSVRSACVAATTAMSLNITKPSF 134
L RS + + K +S VS L +PD +R A AA +++N
Sbjct: 64 NLQRSAALAFAEITEKYVSPVSRDVLEPILMLLTNPDPQIRIASCAALGNLAVNNENKLL 123
Query: 135 SVLS---KPLIELILVEQDVNSQVGGAMCLAAAIDAAPNP-EVEQLRKLLPRLGKAVRIE 190
V +PLIE + +V Q C+ N E+ Q L+P L K R
Sbjct: 124 IVEMGGLEPLIEQ-MKSDNVEVQCNAVGCITNLATQDDNKIEIAQSGALVP-LTKLARSS 181
Query: 191 GFKAKAAVLGVIGSVVRVGGARSKGVLDWLVPCLVEFLCCDDWATRKAAAEVLGKVAV 248
+ + G + ++ G R + V VP LV L D + L +AV
Sbjct: 182 NIRVQRNATGALLNMTHSGENRKELVDAGAVPVLVSLLSSMDADVQYYCTTALSNIAV 239
>sp|Q7Z6J6|FRMD5_HUMAN FERM domain-containing protein 5 OS=Homo sapiens GN=FRMD5 PE=1 SV=1
Length = 570
Score = 33.5 bits (75), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 26/119 (21%)
Query: 43 LESIARTLTQDSFSSFLNCLQTT-DSSSKSPVRKQCVNLLTLLSRSHGDSLSPHLSKMIS 101
L S+ RT + S + L++ DS+ +PVR S SHGD+ PH+
Sbjct: 361 LSSVPRTRRRAVHISIMEGLESLRDSAHSTPVR----------STSHGDTFLPHV----- 405
Query: 102 TVSCRLRDPDSSVRSACVAATTAMSLNITKPSFSVLSKPLIELILVEQDVNSQVGGAMC 160
R DS+ R A +A P+ SVL P+ E L ++ Q+ GA C
Sbjct: 406 ----RSSRTDSNERVAVIAD------EAYSPADSVLPTPVAEHSLELMLLSRQINGATC 454
>sp|P32337|IMB3_YEAST Importin subunit beta-3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PSE1 PE=1 SV=2
Length = 1089
Score = 33.5 bits (75), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 199 LGVIGSVVRVGGARSKGVLDWLVPCLVEFLCCDDWATRKAAAEVLGKVAVFDKDLATEYK 258
L VIG +++ GG ++ + + +P + E L D R+AA+ ++G A + + Y
Sbjct: 880 LVVIGDLIQYGGEQTASMKNAFIPKVTECLISPDARIRQAASYIIGVCAQYAP---STYA 936
Query: 259 RSCLAALET 267
C+ L+T
Sbjct: 937 DVCIPTLDT 945
>sp|Q9BU89|DOHH_HUMAN Deoxyhypusine hydroxylase OS=Homo sapiens GN=DOHH PE=1 SV=1
Length = 302
Score = 33.1 bits (74), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 12/74 (16%)
Query: 221 VPCLVEFL--CCDDWATRKAAAEVLGKVAVFDKDLATEYKRSCLAALETRRFDKVKIVRE 278
VP L L C ++ R AE LG +A + +CLAAL+ D ++VRE
Sbjct: 222 VPQLAAALARCTENPMVRHECAEALGAIA----------RPACLAALQAHADDPERVVRE 271
Query: 279 TMNRSLEMWKEVPG 292
+ +L+M++ G
Sbjct: 272 SCEVALDMYEHETG 285
>sp|Q3A7A9|CBID_PELCD Putative cobalt-precorrin-6A synthase [deacetylating] OS=Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1) GN=cbiD PE=3
SV=1
Length = 350
Score = 32.7 bits (73), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 7 SSSASPPPSTNDLKQRVITCLNKLADRDTLPVATAELESIARTLTQDSFSSFLNCLQTTD 66
S SASP PS +L R++ C +A+ T+ A+L + R D+ + L +
Sbjct: 264 SRSASPVPSVRELATRILEC--PVAESTTVEGVFADLTAEQRQCLGDTLARALQIAVSHR 321
Query: 67 SSSKSPVRKQCVNLLTLLSRSHGDSLSP 94
++PV +NL + S GD L+P
Sbjct: 322 LDHRAPVATALINLAGDMLGSCGD-LTP 348
>sp|Q6IR74|CTL1_XENLA Choline transporter-like protein 1 OS=Xenopus laevis GN=slc44a1
PE=2 SV=2
Length = 651
Score = 32.7 bits (73), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 295 EEVSSPSPSKSFSIDNGSSGCFPSITKSSQNVGLRTPQ--PKKMVPTSR--------SPA 344
EE+ + + K F+ NGS+ C S+T S R P PK VP S +P
Sbjct: 116 EELQTLNDVKKFAETNGSALCDYSLTPSQYTTDSRAPSLCPKLPVPKSAPIPFFHRCAPV 175
Query: 345 SDSSYGTTSKTEISFKSNN 363
+ S Y ++ I+F S+N
Sbjct: 176 NISCYAKFAEALITFVSDN 194
>sp|Q86Y56|HEAT2_HUMAN HEAT repeat-containing protein 2 OS=Homo sapiens GN=HEATR2 PE=1
SV=4
Length = 855
Score = 32.7 bits (73), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 73 VRKQCVNLLTLLSRSHGDSLSPHLSKMISTVSCRLRDPDSSVRSACVAATTAMSLNITKP 132
+R V LL L G +L+PHL + + C L DP ++VR + A++ T
Sbjct: 141 LRLALVQLLGLAVDLCGAALAPHLDDALRALRCSLLDPFAAVRRESCSCAAALA-QATPD 199
Query: 133 SFSVLSKPLI 142
F + S+ LI
Sbjct: 200 HFHMQSESLI 209
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,638,512
Number of Sequences: 539616
Number of extensions: 8562491
Number of successful extensions: 19978
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 19883
Number of HSP's gapped (non-prelim): 128
length of query: 595
length of database: 191,569,459
effective HSP length: 123
effective length of query: 472
effective length of database: 125,196,691
effective search space: 59092838152
effective search space used: 59092838152
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)