BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046418
(215 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
++GNL Q+ + RS L ++YG + VY G+ P +V+ + E + AFS R
Sbjct: 20 VLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGR 79
Query: 121 PRSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCLINK 179
+ IA ++ G + FA GE WR LR+ + + K + R+ EE CL+ +
Sbjct: 80 GK-IAVVDPIFQGYGVIFAN-GERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEE 137
Query: 180 IRRSCINVHGRSTINLSEMILAVSNNIASRCIFGRK 215
+R+S + ++ + + ++++NI +FG++
Sbjct: 138 LRKS-----KGALLDNTLLFHSITSNIICSIVFGKR 168
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
++GNL Q+ + RS L ++YG + VY G+ P +V+ + E + AFS R
Sbjct: 20 VLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGR 79
Query: 121 PRSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCLINK 179
+ IA ++ G + FA GE WR LR+ + + K + R+ EE CL+ +
Sbjct: 80 GK-IAVVDPIFQGYGVIFAN-GERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEE 137
Query: 180 IRRSCINVHGRSTINLSEMILAVSNNIASRCIFGRK 215
+R+S + ++ + + ++++NI +FG++
Sbjct: 138 LRKS-----KGALLDNTLLFHSITSNIICSIVFGKR 168
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
++GNL Q+ + RS L ++YG + VY G+ P +V+ + E + AFS R
Sbjct: 20 VLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGR 79
Query: 121 PRSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCLINK 179
+ IA ++ G + FA GE WR LR+ + + K + R+ EE CL+ +
Sbjct: 80 GK-IAVVDPIFQGYGVIFAN-GERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEE 137
Query: 180 IRRSCINVHGRSTINLSEMILAVSNNIASRCIFGRK 215
+R+S + ++ + + ++++NI +FG++
Sbjct: 138 LRKS-----KGALLDNTLLFHSITSNIICSIVFGKR 168
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
++GNL Q+ + RS L ++YG + VY G+ P +V+ + E + AFS R
Sbjct: 20 VLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGR 79
Query: 121 PRSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCLINK 179
+ IA ++ G + FA GE WR LR+ + + K + R+ EE CL+ +
Sbjct: 80 GK-IAVVDPIFQGYGVIFAN-GERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEE 137
Query: 180 IRRSCINVHGRSTINLSEMILAVSNNIASRCIFGRK 215
+R+S + ++ + + ++++NI +FG++
Sbjct: 138 LRKS-----KGALLDNTLLFHSITSNIICSIVFGKR 168
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
++GNL Q+ + RS L ++YG + VY G+ P +V+ + E + AFS R
Sbjct: 20 VLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGR 79
Query: 121 PRSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCLINK 179
+ IA ++ G + FA GE WR LR+ + + K + R+ EE CL+ +
Sbjct: 80 GK-IAVVDPIFQGYGVIFAN-GERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEE 137
Query: 180 IRRSCINVHGRSTINLSEMILAVSNNIASRCIFGRK 215
+R+S + ++ + + ++++NI +FG++
Sbjct: 138 LRKS-----KGALLDNTLLFHSITSNIICSIVFGKR 168
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
IIGN+ QI +S S YGP+ VYFG +P +V E E + + FS R
Sbjct: 20 IIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEEFSGR 79
Query: 121 PRS-IATKILLYDGKDLG-FAEYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCLI 177
S I+ +I K LG + G+ W+++R+ + L + K + RV EE CL+
Sbjct: 80 GNSPISQRIT----KGLGIISSNGKRWKEIRRFSLTTLRNFGMGKRSIEDRVQEEAHCLV 135
Query: 178 NKIRRS 183
++R++
Sbjct: 136 EELRKT 141
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
IIGN+ QI +SL S+ YGP+ VY G P++V+ E E + F+ R
Sbjct: 20 IIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALVDLGEEFAGR 79
Query: 121 PRSIATKILLYDGKDLGFA-EYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCLIN 178
+ IL K LG A + W+++R+ ++ L + K + R+ EE CL+
Sbjct: 80 G---SVPILEKVSKGLGIAFSNAKTWKEMRRFSLMTLRNFGMGKRSIEDRIQEEARCLVE 136
Query: 179 KIRRS 183
++R++
Sbjct: 137 ELRKT 141
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Query: 74 HRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIATKILLYDG 133
H + L +YGPI V G +++V +LA E++ FS RP+ I +
Sbjct: 32 HNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNR 91
Query: 134 KDLGFAEYGEYWRQLRKICVLEL-LSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRST 192
K + FA+ G +W+ R++ + L + + I +E+S L + + H +
Sbjct: 92 KGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCD-----MLATHNGQS 146
Query: 193 INLS-EMILAVSNNIASRCI 211
I++S + +AV+N I+ C
Sbjct: 147 IDISFPVFVAVTNVISLICF 166
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
+IGN+ QI +SL LS YGP+ +YFG P +V+ E E + FS R
Sbjct: 21 VIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGR 80
Query: 121 PRSIATKILLYDGKDLGFA---EYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCL 176
L + + GF G+ W+++R+ ++ L + K + RV EE CL
Sbjct: 81 -----GIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCL 135
Query: 177 INKIRRS 183
+ ++R++
Sbjct: 136 VEELRKT 142
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
IGN Q+ + SL +S+RYGP+ ++ G +V+ + E + FS R
Sbjct: 20 FIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEEFSGR 79
Query: 121 PRSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCLINK 179
AT L+ G + F+ GE +QLR+ + L K R+ EE LI+
Sbjct: 80 GEQ-ATFDWLFKGYGVAFSN-GERAKQLRRFSIATLRGFGVGKRGIEERIQEEAGFLIDA 137
Query: 180 IRRSCINVHGRSTINLSEMILAVSNNIASRCIFGRK 215
+R HG + I+ + + +N+ S +FG +
Sbjct: 138 LR----GTHG-ANIDPTFFLSRTVSNVISSIVFGDR 168
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
+IGN+ QI +SL LS YGP+ +YFG P +V+ E E + FS R
Sbjct: 19 VIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGR 78
Query: 121 PRSIATKILLYDGKDLGFA---EYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCL 176
L + + GF G+ W+++R+ ++ L + K + RV EE CL
Sbjct: 79 -----GIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCL 133
Query: 177 INKIRRS 183
+ ++R++
Sbjct: 134 VEELRKT 140
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
+IGN+ QI +SL LS YGP+ +YFG +V+ E+ E + FS R
Sbjct: 21 VIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALIDLGEEFSGR 80
Query: 121 PRSIATKILLYDGKDLGFA---EYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCL 176
L + + GF G+ W+++R+ ++ L + K + RV EE CL
Sbjct: 81 -----GHFPLAERANRGFGIVFSNGKRWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCL 135
Query: 177 INKIRRS 183
+ ++R++
Sbjct: 136 VEELRKT 142
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Query: 66 HQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIA 125
H QN P+ L R+G + + +P +V++ E + TH ++RP
Sbjct: 26 HVDFQNTPY-CFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPI 84
Query: 126 TKILLYDGKDLG--FAEYGEYWRQLRKICVLELLS-NKRVKSAQHIRVEEVSCLINKIRR 182
T+IL + + G A YG WR+ R+ V L + KS + EE +CL
Sbjct: 85 TQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAF-- 142
Query: 183 SCINVHGRSTINLSEMILAVSNNIAS 208
N GR + AVSN IAS
Sbjct: 143 --ANHSGRPFRPNGLLDKAVSNVIAS 166
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Query: 66 HQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIA 125
H QN P+ L R+G + + +P +V++ E + TH ++RP
Sbjct: 26 HVDFQNTPY-CFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPI 84
Query: 126 TKILLYDGKDLG--FAEYGEYWRQLRKICVLELLS-NKRVKSAQHIRVEEVSCLINKIRR 182
T+IL + + G A YG WR+ R+ V L + KS + EE +CL
Sbjct: 85 TQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAF-- 142
Query: 183 SCINVHGRSTINLSEMILAVSNNIAS 208
N GR + AVSN IAS
Sbjct: 143 --ANHSGRPFRPNGLLDKAVSNVIAS 166
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
IGN Q+ + SL +S+RYGP+ ++ G +V+ + E + FS R
Sbjct: 20 FIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGR 79
Query: 121 PRSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCLINK 179
AT ++ G + F+ GE +QLR+ + L K R+ EE LI+
Sbjct: 80 GEQ-ATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDA 137
Query: 180 IRRSCINVHGRSTINLSEMILAVSNNIASRCIFGRK 215
+R + G + I+ + + +N+ S +FG +
Sbjct: 138 LRGT-----GGANIDPTFFLSRTVSNVISSIVFGDR 168
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 81/164 (49%), Gaps = 16/164 (9%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
++G++ + +N PH +L +S RYG ++ + G++P LV+S + + + F R
Sbjct: 26 LLGHVLTLGKN-PHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGR 84
Query: 121 PRSIATKILLYDGKDLGFA-EYGEYWRQLRKIC-----VLELLSNKRVKSA----QHIRV 170
P + T L+ DG+ L F+ + G W R++ + S+ S+ +H+
Sbjct: 85 P-DLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVS- 142
Query: 171 EEVSCLINKIRRSCINVHGRSTINLSEMILAVSNNIASRCIFGR 214
+E LI++++ N +++++V+N I + C FG+
Sbjct: 143 KEAKALISRLQELMAGPGHFDPYN--QVVVSVANVIGAMC-FGQ 183
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
IGN Q+ + SL +S+RYGP+ ++ G +V+ + E + FS R
Sbjct: 20 FIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGR 79
Query: 121 PRSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCLINK 179
AT ++ G + F+ GE +QLR+ + L K R+ EE LI+
Sbjct: 80 GEQ-ATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDA 137
Query: 180 IRRSCINVHGRSTINLSEMILAVSNNIASRCIFGRK 215
+R + G + I+ + + +N+ S +FG +
Sbjct: 138 LRGT-----GGANIDPTFFLSRTVSNVISSIVFGDR 168
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
IGN Q+ + SL +S+RYGP+ ++ G +V+ + E + FS R
Sbjct: 20 FIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGR 79
Query: 121 PRSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCLINK 179
AT ++ G + F+ GE +QLR+ + L K R+ EE LI+
Sbjct: 80 GEQ-ATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDA 137
Query: 180 IRRSCINVHGRSTINLSEMILAVSNNIASRCIFGRK 215
+R + G + I+ + + +N+ S +FG +
Sbjct: 138 LRGT-----GGANIDPTFFLSRTVSNVISSIVFGDR 168
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
IGN Q+ + SL +S+RYGP+ ++ G +V+ + E + FS R
Sbjct: 20 FIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGR 79
Query: 121 PRSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCLINK 179
AT ++ G + F+ GE +QLR+ + L K R+ EE LI+
Sbjct: 80 GEQ-ATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDA 137
Query: 180 IRRSCINVHGRSTINLSEMILAVSNNIASRCIFGRK 215
+R + G + I+ + + +N+ S +FG +
Sbjct: 138 LRGT-----GGANIDPTFFLSRTVSNVISSIVFGDR 168
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
IGN Q+ + SL +S+RYGP+ ++ G +V+ + E + FS R
Sbjct: 20 FIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGR 79
Query: 121 PRSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCLINK 179
AT ++ G + F+ GE +QLR+ + L K R+ EE LI+
Sbjct: 80 GEQ-ATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDA 137
Query: 180 IRRSCINVHGRSTINLSEMILAVSNNIASRCIFGRK 215
+R + G + I+ + + +N+ S +FG +
Sbjct: 138 LRGT-----GGANIDPTFFLSRTVSNVISSIVFGDR 168
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
+IGN + Q H S L+ RYG + + G+ P +V++ + + AF++R
Sbjct: 19 LIGNAAAVGQAA-HLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADR 77
Query: 121 PRSIATKILLYDGKDLGFAEYGEYWRQLRK 150
P S A+ ++ G+ + F Y E+W+ R+
Sbjct: 78 P-SFASFRVVSGGRSMAFGHYSEHWKVQRR 106
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Query: 75 RSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIATKILLYDGK 134
+S ++YG + V+ G P +++ E E + AFS R + IA + G
Sbjct: 34 KSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGK-IAMVDPFFRGY 92
Query: 135 DLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRV-EEVSCLINKIRRSCINVHGRSTI 193
+ FA G W+ LR+ V + K + R+ EE CLI ++R+S + +
Sbjct: 93 GVIFAN-GNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKS-----KGALM 146
Query: 194 NLSEMILAVSNNIASRCIFGRK 215
+ + + +++ NI +FG++
Sbjct: 147 DPTFLFQSITANIICSIVFGKR 168
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 61 IIGNLHQI-LQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSN 119
IIGNL Q+ L+N+P +S L+ R+GP+ +Y G+ +V+ + E + + FS
Sbjct: 20 IIGNLFQLELKNIP-KSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSG 78
Query: 120 RPRSIATKILLYDGKDLGFA-EYGEYWRQLRKICVLELLSNKRVKSAQHIRVE-EVSCLI 177
R A + +D G G W+ +R+ + L + K R++ E L+
Sbjct: 79 RGDLPA----FHAHRDRGIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLL 134
Query: 178 NKIRRS 183
+R++
Sbjct: 135 EALRKT 140
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
+IG++ + +N PH +L +S +YG ++ + G++P +V+S + + + F R
Sbjct: 21 LIGHMLTLGKN-PHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGR 79
Query: 121 PRSIATKILLYDGKDLGFA-EYGEYWRQLRKIC 152
P + T L+ +G+ + F+ + G W R++
Sbjct: 80 P-DLYTFTLISNGQSMSFSPDSGPVWAARRRLA 111
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120
+ G LH + N+P L +L+ + GP+ + G +V++S E M + F+ R
Sbjct: 34 VPGFLHLLQPNLPIH-LLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGR 92
Query: 121 PRSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKR 161
P+ + K++ +D+ +Y W+ +K+ LL R
Sbjct: 93 PQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTR 133
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 59/145 (40%), Gaps = 7/145 (4%)
Query: 72 VPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRP-RSIATKILL 130
+PH ++ S YG I + G ++V++ ++ E + F++RP + K+
Sbjct: 35 LPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTK 94
Query: 131 YDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGR 190
G L + YG W R++ V + + ++ E + N I +
Sbjct: 95 MGG--LLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFN----DAIETYKG 148
Query: 191 STINLSEMILAVSNNIASRCIFGRK 215
+ ++I +NI + IFG +
Sbjct: 149 RPFDFKQLITNAVSNITNLIIFGER 173
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 59/145 (40%), Gaps = 7/145 (4%)
Query: 72 VPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRP-RSIATKILL 130
+PH ++ S YG I + G ++V++ ++ E + F++RP + K+
Sbjct: 35 LPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTK 94
Query: 131 YDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGR 190
G L + YG W R++ V + + ++ E + N I +
Sbjct: 95 MGG--LLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFN----DAIETYKG 148
Query: 191 STINLSEMILAVSNNIASRCIFGRK 215
+ ++I +NI + IFG +
Sbjct: 149 RPFDFKQLITNAVSNITNLIIFGER 173
>pdb|1X1F|A Chain A, Solution Structure Of The Ph Domain Of Human Docking
Protein Brdg1
Length = 149
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 137 GFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLI--NKIRRSC 184
G+ EY YW +LR + K + + + +++CL N ++C
Sbjct: 30 GYREYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTCLTEQNSTEKNC 79
>pdb|1D6N|A Chain A, Ternary Complex Structure Of Human Hgprtase, Prpp, Mg2+,
And The Inhibitor Hpp Reveals The Involvement Of The
Flexible Loop In Substrate Binding
pdb|1D6N|B Chain B, Ternary Complex Structure Of Human Hgprtase, Prpp, Mg2+,
And The Inhibitor Hpp Reveals The Involvement Of The
Flexible Loop In Substrate Binding
Length = 214
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 108 EMMKTHDIAFSNRPRSIATK-----ILLYDGKDLGFA-EYGEYWRQLRKICVLELLSNKR 161
+M+K + PRS+ K + D +G+A +Y EY+R L +CV+ +
Sbjct: 152 KMVKVASLLVKRTPRSVGYKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVISETGKAK 211
Query: 162 VKS 164
K+
Sbjct: 212 YKA 214
>pdb|1HMP|A Chain A, The Crystal Structure Of Human Hypoxanthine-Guanine
Phosphoribosyltransferase With Bound Gmp
pdb|1HMP|B Chain B, The Crystal Structure Of Human Hypoxanthine-Guanine
Phosphoribosyltransferase With Bound Gmp
pdb|1BZY|A Chain A, Human Hgprtase With Transition State Inhibitor
pdb|1BZY|B Chain B, Human Hgprtase With Transition State Inhibitor
pdb|1BZY|C Chain C, Human Hgprtase With Transition State Inhibitor
pdb|1BZY|D Chain D, Human Hgprtase With Transition State Inhibitor
pdb|1Z7G|A Chain A, Free Human Hgprt
pdb|1Z7G|B Chain B, Free Human Hgprt
pdb|1Z7G|C Chain C, Free Human Hgprt
pdb|1Z7G|D Chain D, Free Human Hgprt
pdb|3GEP|A Chain A, Human Hypoxanthine Guanine Phosphoribosyltranserfase In
Complex With (S)-9-(3-Hydroxy-2-Phosphonylmethoxypropyl)
Guanine
pdb|3GEP|B Chain B, Human Hypoxanthine Guanine Phosphoribosyltranserfase In
Complex With (S)-9-(3-Hydroxy-2-Phosphonylmethoxypropyl)
Guanine
pdb|3GGC|A Chain A, Human Hypoxanthine-guanine Phosphoribosyltransferase In
Complex With 9-(2-phosphonoethoxyethyl)hypoxanthine
pdb|3GGC|B Chain B, Human Hypoxanthine-guanine Phosphoribosyltransferase In
Complex With 9-(2-phosphonoethoxyethyl)hypoxanthine
pdb|3GGJ|A Chain A, Human Hypoxanthine-guanine Phosphoribosyltransferase In
Complex With 9-(2-phosphonoethoxyethyl)guanine
pdb|3GGJ|B Chain B, Human Hypoxanthine-guanine Phosphoribosyltransferase In
Complex With 9-(2-phosphonoethoxyethyl)guanine
Length = 217
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 108 EMMKTHDIAFSNRPRSIATK-----ILLYDGKDLGFA-EYGEYWRQLRKICVLELLSNKR 161
+M+K + PRS+ K + D +G+A +Y EY+R L +CV+ +
Sbjct: 155 KMVKVASLLVKRTPRSVGYKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVISETGKAK 214
Query: 162 VKS 164
K+
Sbjct: 215 YKA 217
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,688,223
Number of Sequences: 62578
Number of extensions: 140007
Number of successful extensions: 314
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 286
Number of HSP's gapped (non-prelim): 33
length of query: 215
length of database: 14,973,337
effective HSP length: 95
effective length of query: 120
effective length of database: 9,028,427
effective search space: 1083411240
effective search space used: 1083411240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 49 (23.5 bits)