Query 046418
Match_columns 215
No_of_seqs 159 out of 1631
Neff 10.8
Searched_HMMs 46136
Date Fri Mar 29 11:54:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046418.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046418hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 7.6E-30 1.6E-34 204.8 21.8 161 50-215 25-187 (489)
2 PLN02687 flavonoid 3'-monooxyg 100.0 6.4E-29 1.4E-33 203.7 20.4 170 40-215 23-193 (517)
3 PLN03112 cytochrome P450 famil 100.0 1.5E-27 3.3E-32 195.6 20.2 176 36-215 17-192 (514)
4 PLN03234 cytochrome P450 83B1; 100.0 3.3E-27 7.1E-32 193.0 21.2 171 42-215 19-189 (499)
5 PLN00110 flavonoid 3',5'-hydro 100.0 7.5E-27 1.6E-31 190.7 21.4 177 35-215 15-191 (504)
6 PTZ00404 cytochrome P450; Prov 100.0 2E-27 4.4E-32 193.5 18.0 162 47-215 25-186 (482)
7 PLN02971 tryptophan N-hydroxyl 100.0 9.4E-27 2E-31 191.7 21.7 166 47-215 53-220 (543)
8 PLN02394 trans-cinnamate 4-mon 100.0 2.4E-26 5.3E-31 188.1 21.2 168 46-215 25-192 (503)
9 PLN02966 cytochrome P450 83A1 100.0 9.1E-27 2E-31 190.4 18.2 169 44-215 22-190 (502)
10 PLN02183 ferulate 5-hydroxylas 100.0 1.6E-26 3.5E-31 189.5 19.6 161 48-215 33-193 (516)
11 PLN00168 Cytochrome P450; Prov 99.9 2E-25 4.3E-30 183.2 21.2 164 48-215 32-198 (519)
12 KOG0158 Cytochrome P450 CYP3/C 99.9 7.9E-26 1.7E-30 180.0 18.0 171 39-215 19-192 (499)
13 PLN02290 cytokinin trans-hydro 99.9 8.2E-26 1.8E-30 185.5 16.8 160 49-215 40-219 (516)
14 PLN02196 abscisic acid 8'-hydr 99.9 2.1E-25 4.6E-30 180.6 16.9 156 48-215 32-187 (463)
15 PLN02500 cytochrome P450 90B1 99.9 3.8E-25 8.3E-30 180.4 16.7 158 47-215 34-196 (490)
16 PLN02655 ent-kaurene oxidase 99.9 8.9E-25 1.9E-29 177.2 17.9 162 53-215 1-162 (466)
17 PLN02774 brassinosteroid-6-oxi 99.9 3.8E-24 8.3E-29 173.4 16.1 154 49-214 29-183 (463)
18 PLN03018 homomethionine N-hydr 99.9 3.7E-23 8E-28 169.8 21.3 161 51-215 40-203 (534)
19 PLN02302 ent-kaurenoic acid ox 99.9 8.5E-23 1.8E-27 166.8 20.3 157 47-215 38-201 (490)
20 KOG0157 Cytochrome P450 CYP4/C 99.9 1.9E-23 4.2E-28 170.0 16.2 157 49-213 33-192 (497)
21 PLN03195 fatty acid omega-hydr 99.9 2E-22 4.3E-27 165.5 18.7 155 52-215 31-190 (516)
22 PLN02169 fatty acid (omega-1)- 99.9 2.9E-22 6.3E-27 163.6 19.2 158 51-215 31-195 (500)
23 PF00067 p450: Cytochrome P450 99.9 1.7E-23 3.6E-28 168.8 11.6 157 53-215 1-161 (463)
24 PLN02738 carotene beta-ring hy 99.9 2.7E-22 5.9E-27 166.9 16.0 147 62-215 142-288 (633)
25 PLN03141 3-epi-6-deoxocathaste 99.9 2.9E-22 6.4E-27 162.0 15.3 157 47-214 3-164 (452)
26 PLN02987 Cytochrome P450, fami 99.9 6.8E-22 1.5E-26 160.2 17.0 156 47-215 26-186 (472)
27 PLN02936 epsilon-ring hydroxyl 99.9 6.1E-22 1.3E-26 161.5 15.5 155 54-215 15-174 (489)
28 PLN02648 allene oxide synthase 99.9 9E-22 1.9E-26 159.1 9.7 159 48-215 14-191 (480)
29 KOG0159 Cytochrome P450 CYP11/ 99.8 9.1E-19 2E-23 137.9 15.1 165 49-215 48-220 (519)
30 PLN02426 cytochrome P450, fami 99.8 6.7E-17 1.5E-21 132.2 18.9 149 59-215 49-201 (502)
31 KOG0684 Cytochrome P450 [Secon 99.7 2.6E-15 5.7E-20 116.3 14.0 154 51-214 31-187 (486)
32 COG2124 CypX Cytochrome P450 [ 99.3 1.8E-11 3.9E-16 98.0 11.9 130 73-214 24-159 (411)
33 cd08780 Death_TRADD Death Doma 82.8 7.8 0.00017 23.9 5.6 68 142-213 13-89 (90)
34 KOG0114 Predicted RNA-binding 76.3 14 0.0003 23.7 5.4 59 50-111 11-75 (124)
35 KOG3653 Transforming growth fa 72.4 26 0.00057 29.1 7.3 50 71-120 209-259 (534)
36 PHA03049 IMV membrane protein; 69.5 17 0.00036 21.0 4.1 15 42-56 22-36 (68)
37 TIGR00807 malonate_madL malona 69.1 15 0.00032 24.0 4.4 14 1-14 70-83 (125)
38 PF12273 RCR: Chitin synthesis 61.3 4.8 0.0001 26.9 1.2 13 36-48 14-26 (130)
39 PF15330 SIT: SHP2-interacting 56.9 33 0.00071 22.1 4.4 10 59-68 46-55 (107)
40 cd08318 Death_NMPP84 Death dom 55.7 46 0.00099 20.4 5.9 63 142-210 18-84 (86)
41 PF03817 MadL: Malonate transp 49.9 46 0.00099 21.9 4.1 14 1-14 70-83 (125)
42 PF13625 Helicase_C_3: Helicas 46.4 43 0.00092 22.2 3.9 39 71-111 74-112 (129)
43 PHA01327 hypothetical protein 45.6 7.8 0.00017 19.9 0.2 16 137-152 14-29 (49)
44 PF02009 Rifin_STEVOR: Rifin/s 45.2 28 0.0006 27.1 3.2 9 37-45 275-283 (299)
45 PF13893 RRM_5: RNA recognitio 42.3 57 0.0012 17.6 5.1 34 78-111 2-39 (56)
46 cd08777 Death_RIP1 Death Domai 41.1 85 0.0018 19.3 6.5 40 142-184 13-57 (86)
47 PRK12333 nucleoside triphospha 37.7 94 0.002 22.7 4.7 45 161-212 24-68 (204)
48 PF09926 DUF2158: Uncharacteri 35.5 47 0.001 18.3 2.3 17 85-101 4-20 (53)
49 PF08780 NTase_sub_bind: Nucle 34.4 1.4E+02 0.003 19.8 6.6 35 133-170 71-108 (124)
50 cd01670 Death Death Domain: a 29.4 1.2E+02 0.0027 17.6 5.9 40 142-184 10-52 (79)
51 TIGR02736 cbb3_Q_epsi cytochro 29.4 1.1E+02 0.0024 17.1 3.5 10 36-45 16-25 (56)
52 PF15206 FAM209: FAM209 family 28.3 52 0.0011 22.2 2.0 16 47-62 62-77 (150)
53 PF05172 Nup35_RRM: Nup53/35/4 24.6 2E+02 0.0042 18.3 4.6 47 72-118 17-79 (100)
54 PF07912 ERp29_N: ERp29, N-ter 24.0 2.3E+02 0.005 18.9 6.2 41 78-118 71-123 (126)
55 PLN03134 glycine-rich RNA-bind 23.5 2.5E+02 0.0053 19.1 5.1 41 72-112 46-95 (144)
56 TIGR01661 ELAV_HUD_SF ELAV/HuD 23.0 2.6E+02 0.0057 21.9 5.5 55 61-118 273-337 (352)
57 PF14198 TnpV: Transposon-enco 22.5 2.3E+02 0.005 18.4 4.4 40 144-183 33-72 (111)
58 PLN02196 abscisic acid 8'-hydr 22.2 2E+02 0.0044 23.8 4.9 13 44-56 31-43 (463)
59 PF12385 Peptidase_C70: Papain 21.5 1.8E+02 0.0038 20.4 3.6 29 74-102 98-131 (166)
60 KOG3718 Carnitine O-acyltransf 20.1 3.8E+02 0.0082 22.7 5.6 67 86-163 199-265 (609)
61 cd08307 Death_Pelle Death doma 20.1 2.4E+02 0.0053 17.8 6.0 58 141-205 20-80 (97)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=7.6e-30 Score=204.76 Aligned_cols=161 Identities=43% Similarity=0.800 Sum_probs=146.4
Q ss_pred CCCCCCCCCCccccchhhhcCCC-hhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCc-hhhHH
Q 046418 50 LNLPPSPPRLPIIGNLHQILQNV-PHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPR-SIATK 127 (215)
Q Consensus 50 ~~~~p~p~~~p~~g~~~~~~~~~-~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~-~~~~~ 127 (215)
.+.||||+++|++||++++ ... .+..+.++.++|||++.+++|..++|+++|++.++|++.+++..|.+|+. .....
T Consensus 25 ~~lPPGP~~lPiIGnl~~l-~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~ 103 (489)
T KOG0156|consen 25 RNLPPGPPPLPIIGNLHQL-GSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK 103 (489)
T ss_pred CCCCcCCCCCCccccHHHc-CCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence 6889999999999999999 554 99999999999999999999999999999999999999999999999997 33546
Q ss_pred HhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHHHH
Q 046418 128 ILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSNNIA 207 (215)
Q Consensus 128 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~vi 207 (215)
.+..++.+++++.+|+.||.+||......++...++...+...++++++++++.+ . ..++++|+.+.+..++.++|
T Consensus 104 ~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~---~~~~~vdl~~~l~~~~~nvI 179 (489)
T KOG0156|consen 104 YLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-S---KKGEPVDLSELLDLLVGNVI 179 (489)
T ss_pred HhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-c---CCCceeeHHHHHHHHHHHHH
Confidence 6666789999998899999999999999999999999988889999999999987 2 23378999999999999999
Q ss_pred HHHhhcCC
Q 046418 208 SRCIFGRK 215 (215)
Q Consensus 208 ~~~~fG~~ 215 (215)
++++||++
T Consensus 180 ~~~~fG~r 187 (489)
T KOG0156|consen 180 CRMLFGRR 187 (489)
T ss_pred HHHHhCCc
Confidence 99999985
No 2
>PLN02687 flavonoid 3'-monooxygenase
Probab=99.97 E-value=6.4e-29 Score=203.67 Aligned_cols=170 Identities=37% Similarity=0.694 Sum_probs=143.1
Q ss_pred HHHHhhcCCCCCCCCCCCCCccccchhhhcCCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCC
Q 046418 40 LLKLSRSSNKLNLPPSPPRLPIIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSN 119 (215)
Q Consensus 40 ~~~~~~~~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~ 119 (215)
++.....+++.+.||||+++|++||++.+ ..+++.++.+++++||+++++++++.++++++||+++++++.++...|.+
T Consensus 23 ~~~~~~~~~~~~~pPgp~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~ 101 (517)
T PLN02687 23 LRRGGSGKHKRPLPPGPRGWPVLGNLPQL-GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSN 101 (517)
T ss_pred hccccCCCCCCCCCccCCCCCccccHHhc-CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhc
Confidence 33333334455678999999999999888 66789999999999999999999999999999999999999988888888
Q ss_pred CCchhhHHHhhhCCCceeeecCChhHHHHHHHHHh-hccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHH
Q 046418 120 RPRSIATKILLYDGKDLGFAEYGEYWRQLRKICVL-ELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEM 198 (215)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~ 198 (215)
++.......+...+.+++++.+|+.|+++||.+ + ++|+.++++.+.+.+.++++++++.|.+.. +++++|+.+.
T Consensus 102 r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~----~~~~vd~~~~ 176 (517)
T PLN02687 102 RPPNSGAEHMAYNYQDLVFAPYGPRWRALRKIC-AVHLFSAKALDDFRHVREEEVALLVRELARQH----GTAPVNLGQL 176 (517)
T ss_pred CCCccchhhhccCCceeEeCCCCHHHHHHHHHH-HHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc----CCCceeHHHH
Confidence 765444333332345667776799999999999 6 899999999999999999999999998652 4567999999
Q ss_pred HHHHHHHHHHHHhhcCC
Q 046418 199 ILAVSNNIASRCIFGRK 215 (215)
Q Consensus 199 ~~~~~~~vi~~~~fG~~ 215 (215)
+..+++|+++.++||.+
T Consensus 177 ~~~~t~dvi~~~~fG~~ 193 (517)
T PLN02687 177 VNVCTTNALGRAMVGRR 193 (517)
T ss_pred HHHHHHHHHHHHHhCcc
Confidence 99999999999999963
No 3
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.96 E-value=1.5e-27 Score=195.57 Aligned_cols=176 Identities=34% Similarity=0.635 Sum_probs=142.9
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCccccchhhhcCCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCc
Q 046418 36 TLVHLLKLSRSSNKLNLPPSPPRLPIIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDI 115 (215)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~ 115 (215)
++++++.+.+..++.+.||||+++|++||++++ ..+++.++.+++++||+++++++++.+.++++||+++++++.++..
T Consensus 17 ~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~ 95 (514)
T PLN03112 17 VLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDD 95 (514)
T ss_pred HHHHHHccccccCCCCCccCCCCCCeeeeHHhc-CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCc
Confidence 334444445555666789999999999999987 6778999999999999999999999999999999999999988888
Q ss_pred ccCCCCchhhHHHhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccH
Q 046418 116 AFSNRPRSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINL 195 (215)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl 195 (215)
.|.+++..........+..+++++.+|+.|+++||.+.++.|+.++++.+.+.+.++++++++.+.+.. .+++.+|+
T Consensus 96 ~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~---~~~~~vd~ 172 (514)
T PLN03112 96 VFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAA---QTGKPVNL 172 (514)
T ss_pred ccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhh---ccCCeeeH
Confidence 888876543222111112234455569999999999646799999999999999999999999876543 24568999
Q ss_pred HHHHHHHHHHHHHHHhhcCC
Q 046418 196 SEMILAVSNNIASRCIFGRK 215 (215)
Q Consensus 196 ~~~~~~~~~~vi~~~~fG~~ 215 (215)
.+.++.+++|+++.++||.+
T Consensus 173 ~~~~~~~~~~vi~~~~fG~~ 192 (514)
T PLN03112 173 REVLGAFSMNNVTRMLLGKQ 192 (514)
T ss_pred HHHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999964
No 4
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.96 E-value=3.3e-27 Score=193.00 Aligned_cols=171 Identities=40% Similarity=0.714 Sum_probs=141.8
Q ss_pred HHhhcCCCCCCCCCCCCCccccchhhhcCCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCC
Q 046418 42 KLSRSSNKLNLPPSPPRLPIIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRP 121 (215)
Q Consensus 42 ~~~~~~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~ 121 (215)
.+...+++.+.||||+++|++||++.+...+++.++.+++++||+++++++++.++|+++|||.+++++.++...|.+++
T Consensus 19 ~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~ 98 (499)
T PLN03234 19 LRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARP 98 (499)
T ss_pred HHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCC
Confidence 33444455678999999999999998833478889999999999999999999999999999999999998888888887
Q ss_pred chhhHHHhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHH
Q 046418 122 RSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILA 201 (215)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~ 201 (215)
...........+.++.+...++.|+++||.+..+.|++++++.+.+.+.+++++++++|.+.. ++++.+|+.+.+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~---~~~~~vd~~~~~~~ 175 (499)
T PLN03234 99 LLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAA---DQSGTVDLSELLLS 175 (499)
T ss_pred CchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhc---cCCCeEEHHHHHHH
Confidence 544333322224445455568999999998537999999999999999999999999998654 34668999999999
Q ss_pred HHHHHHHHHhhcCC
Q 046418 202 VSNNIASRCIFGRK 215 (215)
Q Consensus 202 ~~~~vi~~~~fG~~ 215 (215)
+++|++++++||.+
T Consensus 176 ~t~dvi~~~~fG~~ 189 (499)
T PLN03234 176 FTNCVVCRQAFGKR 189 (499)
T ss_pred HHHHHHHHHHhCCc
Confidence 99999999999964
No 5
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.96 E-value=7.5e-27 Score=190.72 Aligned_cols=177 Identities=29% Similarity=0.559 Sum_probs=144.8
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCccccchhhhcCCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcC
Q 046418 35 LTLVHLLKLSRSSNKLNLPPSPPRLPIIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHD 114 (215)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~ 114 (215)
.+..++++......+.+.||||+++|++|+++.+ ..+++.++.+++++||+++++++++.++|+++||+++++++.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~ 93 (504)
T PLN00110 15 FITRFFIRSLLPKPSRKLPPGPRGWPLLGALPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLD 93 (504)
T ss_pred HHHHHHHHHHhhcccCCCcccCCCCCeeechhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcc
Confidence 3344445555556666789999999999999877 667899999999999999999999999999999999999999888
Q ss_pred cccCCCCchhhHHHhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCccc
Q 046418 115 IAFSNRPRSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTIN 194 (215)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd 194 (215)
..|.+++..........++.+.+++.+|+.|+++||.+..+.|+.++++.+.+.+.++++++++.+.+.. .+|+++|
T Consensus 94 ~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~---~~g~~~~ 170 (504)
T PLN00110 94 INFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELS---QRGEPVV 170 (504)
T ss_pred hhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhc---cCCCcEe
Confidence 8888877544332222223445566669999999999932579999999999999999999999997653 3566899
Q ss_pred HHHHHHHHHHHHHHHHhhcCC
Q 046418 195 LSEMILAVSNNIASRCIFGRK 215 (215)
Q Consensus 195 l~~~~~~~~~~vi~~~~fG~~ 215 (215)
+.+.+..+++|+|++++||.+
T Consensus 171 ~~~~~~~~~~~vi~~~~fg~~ 191 (504)
T PLN00110 171 VPEMLTFSMANMIGQVILSRR 191 (504)
T ss_pred HHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999999963
No 6
>PTZ00404 cytochrome P450; Provisional
Probab=99.96 E-value=2e-27 Score=193.48 Aligned_cols=162 Identities=26% Similarity=0.411 Sum_probs=138.1
Q ss_pred CCCCCCCCCCCCCccccchhhhcCCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCchhhH
Q 046418 47 SNKLNLPPSPPRLPIIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIAT 126 (215)
Q Consensus 47 ~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~ 126 (215)
+.+.+.+|||+++|++||+..+ ..+++..+.+++++||+++++++++.++|+++||+++++++.++...|.+++.....
T Consensus 25 ~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~ 103 (482)
T PTZ00404 25 KIHKNELKGPIPIPILGNLHQL-GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSI 103 (482)
T ss_pred hccCCCCCCCCCCCeeccHhhh-cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCccee
Confidence 4456789999999999999988 668899999999999999999999999999999999999998777777766543322
Q ss_pred HHhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHHH
Q 046418 127 KILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSNNI 206 (215)
Q Consensus 127 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~v 206 (215)
.... .+.+++..+ |+.|+++||++ +|.|+.++++.+.+.+.+.++++++.|.+.. ++++.+|+.+++.++++|+
T Consensus 104 ~~~~-~~~~l~~~~-g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~---~~~~~vd~~~~~~~~~~dv 177 (482)
T PTZ00404 104 KHGT-FYHGIVTSS-GEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIE---SSGETFEPRYYLTKFTMSA 177 (482)
T ss_pred eeec-cCCceeccC-hHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHH---hcCCccCHHHHHHHHHHHH
Confidence 1111 256776665 99999999999 8999999999999999999999999997653 2456799999999999999
Q ss_pred HHHHhhcCC
Q 046418 207 ASRCIFGRK 215 (215)
Q Consensus 207 i~~~~fG~~ 215 (215)
++.++||.+
T Consensus 178 i~~~~fG~~ 186 (482)
T PTZ00404 178 MFKYIFNED 186 (482)
T ss_pred HHHHHhccc
Confidence 999999974
No 7
>PLN02971 tryptophan N-hydroxylase
Probab=99.96 E-value=9.4e-27 Score=191.73 Aligned_cols=166 Identities=27% Similarity=0.425 Sum_probs=133.7
Q ss_pred CCCCCCCCCCCCCccccchhhhcCCC-hhHHHHHHHhhhC-CeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCchh
Q 046418 47 SNKLNLPPSPPRLPIIGNLHQILQNV-PHRSLKALSDRYG-PIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSI 124 (215)
Q Consensus 47 ~~~~~~~p~p~~~p~~g~~~~~~~~~-~~~~~~~~~~~yG-~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~ 124 (215)
+++.+.||||+++|++||++++..+. .+.++.++.++|| +++++++|+.++|+++||+.+++++.+++..|.+++...
T Consensus 53 ~r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~ 132 (543)
T PLN02971 53 KKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY 132 (543)
T ss_pred CCCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence 34556899999999999998874332 3678999999999 899999999999999999999999998888898887544
Q ss_pred hHHHhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHH
Q 046418 125 ATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSN 204 (215)
Q Consensus 125 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~ 204 (215)
....+..+..+++++.+|+.|+++||++..+.+++...+.+.+.++++++.+++.+.+.. .+++++|+.+.++++++
T Consensus 133 ~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~vd~~~~~~~~t~ 209 (543)
T PLN02971 133 AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMV---KNSEPVDLRFVTRHYCG 209 (543)
T ss_pred chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCceehHHHHHHHHH
Confidence 333332212345666679999999999954567676777888988889999988887643 24567999999999999
Q ss_pred HHHHHHhhcCC
Q 046418 205 NIASRCIFGRK 215 (215)
Q Consensus 205 ~vi~~~~fG~~ 215 (215)
|++++++||.+
T Consensus 210 ~vi~~~~fG~~ 220 (543)
T PLN02971 210 NAIKRLMFGTR 220 (543)
T ss_pred HHHHHHHhCCc
Confidence 99999999964
No 8
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.95 E-value=2.4e-26 Score=188.07 Aligned_cols=168 Identities=30% Similarity=0.571 Sum_probs=137.3
Q ss_pred cCCCCCCCCCCCCCccccchhhhcCCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCchhh
Q 046418 46 SSNKLNLPPSPPRLPIIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIA 125 (215)
Q Consensus 46 ~~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~ 125 (215)
..++.+.||||++.|++|+++.+.....+..+.+++++||+++++++++++.|+++||+.+++++.+++..|.+++....
T Consensus 25 ~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~ 104 (503)
T PLN02394 25 RGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVV 104 (503)
T ss_pred hcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcch
Confidence 34556789999999999999887333357899999999999999999999999999999999999888777877654434
Q ss_pred HHHhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHH
Q 046418 126 TKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSNN 205 (215)
Q Consensus 126 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~ 205 (215)
...+.+.+.+++++.+|+.|+++||.+..|.|++++++.+.+.+.+++++++++|.+... ..++.+|+.+.++.+++|
T Consensus 105 ~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~--~~~~~v~~~~~~~~~~~d 182 (503)
T PLN02394 105 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPE--AATEGVVIRRRLQLMMYN 182 (503)
T ss_pred HhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhh--ccCCcEecHHHHHHHHHH
Confidence 344433344566666699999999998339999999999999999999999999986421 123468999999999999
Q ss_pred HHHHHhhcCC
Q 046418 206 IASRCIFGRK 215 (215)
Q Consensus 206 vi~~~~fG~~ 215 (215)
+++.++||.+
T Consensus 183 vi~~~~fG~~ 192 (503)
T PLN02394 183 IMYRMMFDRR 192 (503)
T ss_pred HHHHHHhCCC
Confidence 9999999974
No 9
>PLN02966 cytochrome P450 83A1
Probab=99.95 E-value=9.1e-27 Score=190.39 Aligned_cols=169 Identities=34% Similarity=0.674 Sum_probs=138.1
Q ss_pred hhcCCCCCCCCCCCCCccccchhhhcCCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCch
Q 046418 44 SRSSNKLNLPPSPPRLPIIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRS 123 (215)
Q Consensus 44 ~~~~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~ 123 (215)
....++.+.||||+++|++||++.+...+++..+.+++++||+++++++++.+.|+++||+.+++++.++...|.+++..
T Consensus 22 ~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~ 101 (502)
T PLN02966 22 KPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPH 101 (502)
T ss_pred ccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCC
Confidence 33344456799999999999999874457889999999999999999999999999999999999998877777766543
Q ss_pred hhHHHhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHH
Q 046418 124 IATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVS 203 (215)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~ 203 (215)
........+..++.+..+|+.|+++|+.+.+++|+.++++.+.+.+.++++++++.|.+.. .+++.+|+.+.+..++
T Consensus 102 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~---~~~~~vdl~~~~~~~t 178 (502)
T PLN02966 102 RGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAA---DKSEVVDISELMLTFT 178 (502)
T ss_pred ccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCceeHHHHHHHHH
Confidence 3222221222334445559999999999338999999999999999999999999998754 3456799999999999
Q ss_pred HHHHHHHhhcCC
Q 046418 204 NNIASRCIFGRK 215 (215)
Q Consensus 204 ~~vi~~~~fG~~ 215 (215)
+|+++.++||.+
T Consensus 179 ~dvi~~~~fG~~ 190 (502)
T PLN02966 179 NSVVCRQAFGKK 190 (502)
T ss_pred HHHHHHHHhCCc
Confidence 999999999974
No 10
>PLN02183 ferulate 5-hydroxylase
Probab=99.95 E-value=1.6e-26 Score=189.47 Aligned_cols=161 Identities=37% Similarity=0.725 Sum_probs=132.9
Q ss_pred CCCCCCCCCCCCccccchhhhcCCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCchhhHH
Q 046418 48 NKLNLPPSPPRLPIIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIATK 127 (215)
Q Consensus 48 ~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~ 127 (215)
++.+.||||+++|++|+++.+ ....+.++.+++++||++|++++++.++|+++||+++++++.++...|.+++......
T Consensus 33 ~~~~~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~ 111 (516)
T PLN02183 33 RRLPYPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAIS 111 (516)
T ss_pred CCCCCCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchh
Confidence 344779999999999999877 5556788999999999999999999999999999999999998888887776543333
Q ss_pred HhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHHHH
Q 046418 128 ILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSNNIA 207 (215)
Q Consensus 128 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~vi 207 (215)
.....+.+.+++.+|+.|+++||++.+++|+.++++.+.+. .++++.++++|.+. .++++|+.+.+..+++|++
T Consensus 112 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~-----~~~~v~~~~~~~~~~~~vi 185 (516)
T PLN02183 112 YLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN-----IGKPVNIGELIFTLTRNIT 185 (516)
T ss_pred ccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc-----CCCcEeHHHHHHHHHHHHH
Confidence 33222234556666999999999943799999999988886 46899999999752 4668999999999999999
Q ss_pred HHHhhcCC
Q 046418 208 SRCIFGRK 215 (215)
Q Consensus 208 ~~~~fG~~ 215 (215)
++++||.+
T Consensus 186 ~~~~fG~~ 193 (516)
T PLN02183 186 YRAAFGSS 193 (516)
T ss_pred HhHhhcCc
Confidence 99999963
No 11
>PLN00168 Cytochrome P450; Provisional
Probab=99.94 E-value=2e-25 Score=183.19 Aligned_cols=164 Identities=26% Similarity=0.424 Sum_probs=134.1
Q ss_pred CCCCCCCCCCCCccccchhhhc--CCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCchhh
Q 046418 48 NKLNLPPSPPRLPIIGNLHQIL--QNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIA 125 (215)
Q Consensus 48 ~~~~~~p~p~~~p~~g~~~~~~--~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~ 125 (215)
+..+.||||+++|++||++.+. ..+++.++.+++++||++|++++++.+.|+++||+++++++.++...|.+++....
T Consensus 32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~ 111 (519)
T PLN00168 32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS 111 (519)
T ss_pred CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence 3456789999999999998652 23578899999999999999999999999999999999999988888888775433
Q ss_pred HHHhhhCCCceee-ecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHH
Q 046418 126 TKILLYDGKDLGF-AEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSN 204 (215)
Q Consensus 126 ~~~~~~~~~~~~~-~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~ 204 (215)
...+. .+.+++. ..+|+.|+++||.+.+|+|+.++++.+.+.+.++++++++.|.+.. ..++.+|+.+.++.+++
T Consensus 112 ~~~~~-~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~---~~~~~v~~~~~~~~~~~ 187 (519)
T PLN00168 112 SRLLG-ESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREA---EDAAAPRVVETFQYAMF 187 (519)
T ss_pred hhhhc-cCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCCCcCHHHHHHHHHH
Confidence 33332 1233443 3569999999874338999999999999999999999999998753 23446899999999999
Q ss_pred HHHHHHhhcCC
Q 046418 205 NIASRCIFGRK 215 (215)
Q Consensus 205 ~vi~~~~fG~~ 215 (215)
++++.++||.+
T Consensus 188 ~ii~~~~fG~~ 198 (519)
T PLN00168 188 CLLVLMCFGER 198 (519)
T ss_pred HHHHHHHcCCC
Confidence 99999999974
No 12
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.94 E-value=7.9e-26 Score=180.02 Aligned_cols=171 Identities=25% Similarity=0.377 Sum_probs=132.1
Q ss_pred HHHHHhhcCCCCCCCCCCCCCccccchhhhcC-CChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCccc
Q 046418 39 HLLKLSRSSNKLNLPPSPPRLPIIGNLHQILQ-NVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAF 117 (215)
Q Consensus 39 ~~~~~~~~~~~~~~~p~p~~~p~~g~~~~~~~-~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~ 117 (215)
+++.+.......+.+|+|++.|++||+..+.. +.......+...++||++.++.+.++.++|+|||++++|+.++.++|
T Consensus 19 ~~~~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F 98 (499)
T KOG0158|consen 19 LWLRWTYSYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNF 98 (499)
T ss_pred HHHHhhhhhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccC
Confidence 33333333444468999999999999998852 22233333333334999999999999999999999999999999999
Q ss_pred CCCC--chhhHHHhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccH
Q 046418 118 SNRP--RSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINL 195 (215)
Q Consensus 118 ~~~~--~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl 195 (215)
.++. ....... .....++.++ +|+.||++|..+ +|.||..+++.+.+.+++.++++++.++++. ..+..+++
T Consensus 99 ~~r~~~~~~d~~~-~l~~~~Lf~~-~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~---~~~~~~~~ 172 (499)
T KOG0158|consen 99 YNRKRPIYGDPED-PLSALNLFFL-RGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKS---EGGQEGEI 172 (499)
T ss_pred cCCCCCCcCCCCC-cccccCchhc-cCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhh---cccCCccH
Confidence 9843 2222111 1112344444 599999999999 9999999999999999999999999999864 22357899
Q ss_pred HHHHHHHHHHHHHHHhhcCC
Q 046418 196 SEMILAVSNNIASRCIFGRK 215 (215)
Q Consensus 196 ~~~~~~~~~~vi~~~~fG~~ 215 (215)
.+.+.++|+|||++++||.+
T Consensus 173 ~dl~~~yT~DVI~~~AfG~~ 192 (499)
T KOG0158|consen 173 KDLCARYTTDVIGSCAFGLD 192 (499)
T ss_pred HHHHHHHHHHHHhHhhcccc
Confidence 99999999999999999974
No 13
>PLN02290 cytokinin trans-hydroxylase
Probab=99.94 E-value=8.2e-26 Score=185.47 Aligned_cols=160 Identities=21% Similarity=0.363 Sum_probs=129.2
Q ss_pred CCCCCCCCCCCccccchhhhcC------------------CChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHH
Q 046418 49 KLNLPPSPPRLPIIGNLHQILQ------------------NVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMM 110 (215)
Q Consensus 49 ~~~~~p~p~~~p~~g~~~~~~~------------------~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il 110 (215)
..+.||||+++|++||++++.. .+....+.+|+++|||++++++++.++|+++||+.+++++
T Consensus 40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il 119 (516)
T PLN02290 40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL 119 (516)
T ss_pred HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence 4467999999999999988621 2233457889999999999999999999999999999999
Q ss_pred HhcCcccCCCCchhh--HHHhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccC
Q 046418 111 KTHDIAFSNRPRSIA--TKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVH 188 (215)
Q Consensus 111 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (215)
.++. .+..++.... ..... |.++++++ |+.|+++||.+ ++.|+.++++.+.+.+.++++++++.|.+... .
T Consensus 120 ~~~~-~~~~r~~~~~~~~~~~~--g~~l~~~~-g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~--~ 192 (516)
T PLN02290 120 TKYN-TVTGKSWLQQQGTKHFI--GRGLLMAN-GADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVE--S 192 (516)
T ss_pred hcCC-CCCCCcchhhhHHHHHh--cCCccccC-chHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHh--c
Confidence 8663 3444443221 11222 56777765 99999999999 89999999999999999999999999986530 1
Q ss_pred CCCcccHHHHHHHHHHHHHHHHhhcCC
Q 046418 189 GRSTINLSEMILAVSNNIASRCIFGRK 215 (215)
Q Consensus 189 ~~~~vdl~~~~~~~~~~vi~~~~fG~~ 215 (215)
++..+|+.+.++.+++|++++++||.+
T Consensus 193 ~~~~vd~~~~~~~~~~~vi~~~~fG~~ 219 (516)
T PLN02290 193 GQTEVEIGEYMTRLTADIISRTEFDSS 219 (516)
T ss_pred CCceEEhHHHHHHHHHHHHHHHHcCCc
Confidence 234789999999999999999999974
No 14
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.94 E-value=2.1e-25 Score=180.62 Aligned_cols=156 Identities=22% Similarity=0.331 Sum_probs=129.1
Q ss_pred CCCCCCCCCCCCccccchhhhcCCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCchhhHH
Q 046418 48 NKLNLPPSPPRLPIIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIATK 127 (215)
Q Consensus 48 ~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~ 127 (215)
.+.+.||||+++|++||+.++..++++.++.+++++||++++++++++++|+++||+++++++.++...|... ......
T Consensus 32 ~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~-~~~~~~ 110 (463)
T PLN02196 32 TKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPT-FPASKE 110 (463)
T ss_pred CCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccccc-CchHHH
Confidence 3456788888899999998764678999999999999999999999999999999999999998777666322 111222
Q ss_pred HhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHHHH
Q 046418 128 ILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSNNIA 207 (215)
Q Consensus 128 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~vi 207 (215)
.. .++.++++.+ |+.|+++||++ ++.|++++++.+.+.+.+.+++++++|.. +.+|+.++++.+++|++
T Consensus 111 ~~-~g~~~l~~~~-g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~v~ 179 (463)
T PLN02196 111 RM-LGKQAIFFHQ-GDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSWEG--------TQINTYQEMKTYTFNVA 179 (463)
T ss_pred HH-cCcccccccC-cHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcCCC--------CeEEeHHHHHHHHHHHH
Confidence 22 2234565555 99999999999 89999999999999999999999988742 36899999999999999
Q ss_pred HHHhhcCC
Q 046418 208 SRCIFGRK 215 (215)
Q Consensus 208 ~~~~fG~~ 215 (215)
+.++||.+
T Consensus 180 ~~~~fG~~ 187 (463)
T PLN02196 180 LLSIFGKD 187 (463)
T ss_pred HHHHcCCC
Confidence 99999974
No 15
>PLN02500 cytochrome P450 90B1
Probab=99.93 E-value=3.8e-25 Score=180.43 Aligned_cols=158 Identities=18% Similarity=0.271 Sum_probs=126.8
Q ss_pred CCCCCCCCCCCCCccccchhhhc----CCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCc
Q 046418 47 SNKLNLPPSPPRLPIIGNLHQIL----QNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPR 122 (215)
Q Consensus 47 ~~~~~~~p~p~~~p~~g~~~~~~----~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~ 122 (215)
.++.+.||||+++|++||++.+. .+..+.++.+++++||+++++++++.++|+++||+++++++.+++..|.++..
T Consensus 34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~ 113 (490)
T PLN02500 34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP 113 (490)
T ss_pred cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence 34456799999999999987542 13567889999999999999999999999999999999999888777754433
Q ss_pred hhhHHHhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhH-hHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHH
Q 046418 123 SIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKS-AQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILA 201 (215)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~ 201 (215)
..... .. ++.++++.+ |+.||++||++ ++.|+..+++. +.+.+.+.+..+++.|.+ ++.+|+.+.+.+
T Consensus 114 ~~~~~-~~-g~~~~~~~~-g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~~vd~~~~~~~ 182 (490)
T PLN02500 114 RSIGG-IL-GKWSMLVLV-GDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWKE-------NSTFSAQDEAKK 182 (490)
T ss_pred hHHHH-Hh-CcccccccC-CHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhCC-------CCCEEehHHHHH
Confidence 22222 22 234666665 99999999999 89999999887 567888888888887752 346899999999
Q ss_pred HHHHHHHHHhhcCC
Q 046418 202 VSNNIASRCIFGRK 215 (215)
Q Consensus 202 ~~~~vi~~~~fG~~ 215 (215)
+++|++++++||.+
T Consensus 183 ~~~~vi~~~~fg~~ 196 (490)
T PLN02500 183 FTFNLMAKHIMSMD 196 (490)
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999999963
No 16
>PLN02655 ent-kaurene oxidase
Probab=99.93 E-value=8.9e-25 Score=177.20 Aligned_cols=162 Identities=25% Similarity=0.400 Sum_probs=133.6
Q ss_pred CCCCCCCccccchhhhcCCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCchhhHHHhhhC
Q 046418 53 PPSPPRLPIIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIATKILLYD 132 (215)
Q Consensus 53 ~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~~ 132 (215)
||||+++|++||++++...+++..+.+++++||++|++++++.++++++||+++++++.++...|.+++.......+.+.
T Consensus 1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~ 80 (466)
T PLN02655 1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD 80 (466)
T ss_pred CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence 68999999999999884456899999999999999999999999999999999999999888888887654443333322
Q ss_pred CCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHHHHHHHhh
Q 046418 133 GKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSNNIASRCIF 212 (215)
Q Consensus 133 ~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~vi~~~~f 212 (215)
+..+.+.++|+.|+++||.+.++.|+..+++.+.+.+.+.++.+++.+.+...+ ..++++|+.+.++.+++|+++.++|
T Consensus 81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~t~dvi~~~~f 159 (466)
T PLN02655 81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKD-DPHSPVNFRDVFENELFGLSLIQAL 159 (466)
T ss_pred CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccc-cCCCceeHHHHHHHHHHHHHHHHHh
Confidence 233445556999999998775678888888899999999999999998765311 2356799999999999999999999
Q ss_pred cCC
Q 046418 213 GRK 215 (215)
Q Consensus 213 G~~ 215 (215)
|.+
T Consensus 160 G~~ 162 (466)
T PLN02655 160 GED 162 (466)
T ss_pred ccc
Confidence 964
No 17
>PLN02774 brassinosteroid-6-oxidase
Probab=99.92 E-value=3.8e-24 Score=173.40 Aligned_cols=154 Identities=18% Similarity=0.192 Sum_probs=126.9
Q ss_pred CCCCCCCCCCCccccchhhhcCCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCchhhHHH
Q 046418 49 KLNLPPSPPRLPIIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIATKI 128 (215)
Q Consensus 49 ~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~ 128 (215)
+++.||||+++|++||++.+ .+++..++++++++||+++++++++.++++++||+++++++.++...|.++.......
T Consensus 29 r~~~ppgp~~~P~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~- 106 (463)
T PLN02774 29 KKGLPPGTMGWPLFGETTEF-LKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD- 106 (463)
T ss_pred CCCCCCCCCCCCchhhHHHH-HHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH-
Confidence 34668899999999999887 5677889999999999999999999999999999999999987776664433222222
Q ss_pred hhhCCCceeeecCChhHHHHHHHHHhhccChhHHhH-hHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHHHH
Q 046418 129 LLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKS-AQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSNNIA 207 (215)
Q Consensus 129 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~vi 207 (215)
.. ++.+++.+ +|+.|+++|+.+ .++|++..++. +.+.+.+.+++++++|.+ ++++|+.+.+..++++++
T Consensus 107 ~l-g~~~~~~~-~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~ 176 (463)
T PLN02774 107 IL-GTCNIAAV-HGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWDG-------LKTIDIQEKTKEMALLSA 176 (463)
T ss_pred Hh-Cccchhhc-CCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhCC-------CCCEEeeHHHHHHHHHHH
Confidence 22 23456555 499999999999 89999999886 789999989999888852 346899999999999999
Q ss_pred HHHhhcC
Q 046418 208 SRCIFGR 214 (215)
Q Consensus 208 ~~~~fG~ 214 (215)
+.++||.
T Consensus 177 ~~~~~g~ 183 (463)
T PLN02774 177 LKQIAGT 183 (463)
T ss_pred HHHHcCC
Confidence 9999986
No 18
>PLN03018 homomethionine N-hydroxylase
Probab=99.92 E-value=3.7e-23 Score=169.80 Aligned_cols=161 Identities=23% Similarity=0.433 Sum_probs=125.7
Q ss_pred CCCCCCCCCccccchhhhcCCChh-HHHHHHHhhh-CCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCchhhHHH
Q 046418 51 NLPPSPPRLPIIGNLHQILQNVPH-RSLKALSDRY-GPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIATKI 128 (215)
Q Consensus 51 ~~~p~p~~~p~~g~~~~~~~~~~~-~~~~~~~~~y-G~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~ 128 (215)
+.||||+++|++||++++...++. .++.+..++| |+++++++++.++|+++||+.+++++.+++..|++++.......
T Consensus 40 ~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~ 119 (534)
T PLN03018 40 QLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMET 119 (534)
T ss_pred CCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhh
Confidence 468999999999999987333332 4565666665 79999999999999999999999999988888988876544443
Q ss_pred hhhCCCceeeecCChhHHHHHHHHHhhccChhHHh-HhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHHHH
Q 046418 129 LLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVK-SAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSNNIA 207 (215)
Q Consensus 129 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~vi 207 (215)
+..++.+++++.+|+.|+++||++ ++.|...+.. .+.+..+.+++++++.+.+.. .++.++|+.+.+.++++|++
T Consensus 120 l~~~~~~i~~~~~G~~Wk~~Rk~l-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~vd~~~~~~~~t~~vi 195 (534)
T PLN03018 120 IGDNYKSMGTSPYGEQFMKMKKVI-TTEIMSVKTLNMLEAARTIEADNLIAYIHSMY---QRSETVDVRELSRVYGYAVT 195 (534)
T ss_pred hccCCCceEecCCCHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCceeHHHHHHHHHHHHH
Confidence 332233577776699999999999 7886555444 455566667999999998643 24457999999999999999
Q ss_pred HHHhhcCC
Q 046418 208 SRCIFGRK 215 (215)
Q Consensus 208 ~~~~fG~~ 215 (215)
++++||.+
T Consensus 196 ~~~~fG~~ 203 (534)
T PLN03018 196 MRMLFGRR 203 (534)
T ss_pred HHHHhCCc
Confidence 99999974
No 19
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.91 E-value=8.5e-23 Score=166.80 Aligned_cols=157 Identities=18% Similarity=0.308 Sum_probs=126.5
Q ss_pred CCCCCCCCCCCCCccccchhhhc----CCChhHHHHHHHhhhCC--eEEEEecCcCeEEeccHHHHHHHHHhcCcccCCC
Q 046418 47 SNKLNLPPSPPRLPIIGNLHQIL----QNVPHRSLKALSDRYGP--IMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120 (215)
Q Consensus 47 ~~~~~~~p~p~~~p~~g~~~~~~----~~~~~~~~~~~~~~yG~--v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~ 120 (215)
..+.+.||||+++|++|+++++. .+++++++.+++++||+ +++++.++.+.++++||++++++++++ +.|.++
T Consensus 38 ~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~ 116 (490)
T PLN02302 38 EGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPG 116 (490)
T ss_pred cCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccC
Confidence 34456799999999999998763 35788999999999997 789999999999999999999999855 455544
Q ss_pred CchhhHHHhhhCCCceeeecCChhHHHHHHHHHhhccC-hhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHH
Q 046418 121 PRSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLS-NKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMI 199 (215)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~ 199 (215)
....... .. |.+.+...+|+.|+++||.+ ++.|+ +++++.+.+.+.+.+++++++|.+ +..+|+.+.+
T Consensus 117 ~~~~~~~-~~--g~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~-------~~~v~~~~~~ 185 (490)
T PLN02302 117 WPESTVE-LI--GRKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK-------MGEIEFLTEL 185 (490)
T ss_pred CchhHHH-Hh--ccccccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC-------CCCEehHHHH
Confidence 3322222 22 33433333499999999999 89995 788999999999999999999863 2358999999
Q ss_pred HHHHHHHHHHHhhcCC
Q 046418 200 LAVSNNIASRCIFGRK 215 (215)
Q Consensus 200 ~~~~~~vi~~~~fG~~ 215 (215)
..++++++++++||.+
T Consensus 186 ~~~~~~vi~~~~~G~~ 201 (490)
T PLN02302 186 RKLTFKIIMYIFLSSE 201 (490)
T ss_pred HHHHHHHHHHHHcCCC
Confidence 9999999999999974
No 20
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.91 E-value=1.9e-23 Score=169.95 Aligned_cols=157 Identities=27% Similarity=0.507 Sum_probs=135.8
Q ss_pred CCCCCCCCCCCccccchhhhcCC--ChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCchh-h
Q 046418 49 KLNLPPSPPRLPIIGNLHQILQN--VPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSI-A 125 (215)
Q Consensus 49 ~~~~~p~p~~~p~~g~~~~~~~~--~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~-~ 125 (215)
..+.+|||+++|++|++..+... +...++.++..+||++++.|++|.+.++++||+.+++|+.++...+.+.+.+. .
T Consensus 33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~ 112 (497)
T KOG0157|consen 33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES 112 (497)
T ss_pred HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence 44679999999999999988433 56678899999999999999999999999999999999976666666665554 4
Q ss_pred HHHhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHH
Q 046418 126 TKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSNN 205 (215)
Q Consensus 126 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~ 205 (215)
..... |+|+++++ |+.|+++||++ .|+|+.+.++.+.+.+.+.+..+.+.+.... .+..+|+++++.++++|
T Consensus 113 ~~~~l--G~gll~~~-g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~tld 184 (497)
T KOG0157|consen 113 LKPWL--GDGLLFSD-GEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAA----SGEEVDLQDLLKRLTLD 184 (497)
T ss_pred HHHHh--cCccccCC-chHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhh----cCCeEcHHHHHHHHHHH
Confidence 44444 77999998 99999999999 8999999999999999999999999888753 34449999999999999
Q ss_pred HHHHHhhc
Q 046418 206 IASRCIFG 213 (215)
Q Consensus 206 vi~~~~fG 213 (215)
++++++||
T Consensus 185 ~i~~~~~G 192 (497)
T KOG0157|consen 185 IICKTAMG 192 (497)
T ss_pred HHHHHhcC
Confidence 99999999
No 21
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.90 E-value=2e-22 Score=165.47 Aligned_cols=155 Identities=15% Similarity=0.226 Sum_probs=122.3
Q ss_pred CCCCCCCCccccchhhhcCCChhHHHHHHHhhh---CCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCchh-hHH
Q 046418 52 LPPSPPRLPIIGNLHQILQNVPHRSLKALSDRY---GPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSI-ATK 127 (215)
Q Consensus 52 ~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~y---G~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~-~~~ 127 (215)
.+|||+++|++||++.+. .+ +..+.++.++| |+++++++++.+.++++||+.+++++.++...|.++.... ...
T Consensus 31 ~~pgp~~~p~~G~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~ 108 (516)
T PLN03195 31 NRKGPKSWPIIGAALEQL-KN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYME 108 (516)
T ss_pred ccCCCCCCCeecchHHHH-hc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHH
Confidence 478999999999987652 22 34566777777 8999999999999999999999999987656676654322 112
Q ss_pred HhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHH-HHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHHH
Q 046418 128 ILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIR-VEEVSCLINKIRRSCINVHGRSTINLSEMILAVSNNI 206 (215)
Q Consensus 128 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~v 206 (215)
... +.+++.. +|+.|+++||.+ ++.|+.++++.+.+.+ .+.++.+++.+.+.. .++..+|+.+++..+++|+
T Consensus 109 ~~~--g~~l~~~-~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~---~~~~~vd~~~~~~~~~~dv 181 (516)
T PLN03195 109 VLL--GDGIFNV-DGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQAS---FANQVVDMQDLFMRMTLDS 181 (516)
T ss_pred HHh--cCeeecc-CcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCeEcHHHHHHHHHHHH
Confidence 222 5676665 599999999999 8999999999999876 556777777776532 2456799999999999999
Q ss_pred HHHHhhcCC
Q 046418 207 ASRCIFGRK 215 (215)
Q Consensus 207 i~~~~fG~~ 215 (215)
++.++||.+
T Consensus 182 i~~~~fG~~ 190 (516)
T PLN03195 182 ICKVGFGVE 190 (516)
T ss_pred HHHHHhCCC
Confidence 999999974
No 22
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.90 E-value=2.9e-22 Score=163.64 Aligned_cols=158 Identities=13% Similarity=0.160 Sum_probs=123.8
Q ss_pred CCCCCCCCCccccchhhhcCC--ChhHHHHHHHhhhCCeEE---EEecCcCeEEeccHHHHHHHHHhcCcccCCCCchhh
Q 046418 51 NLPPSPPRLPIIGNLHQILQN--VPHRSLKALSDRYGPIML---VYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIA 125 (215)
Q Consensus 51 ~~~p~p~~~p~~g~~~~~~~~--~~~~~~~~~~~~yG~v~~---~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~ 125 (215)
+..|+|+++|++||+..+..+ ..++++.+..++||..++ .++++.++++++||+.+++|+.++...|.++.....
T Consensus 31 ~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~ 110 (500)
T PLN02169 31 HGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKK 110 (500)
T ss_pred CCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHH
Confidence 358899999999999876322 234555555556886655 577899999999999999999988777877654332
Q ss_pred HHHhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhH--hHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHH
Q 046418 126 TKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKS--AQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVS 203 (215)
Q Consensus 126 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~ 203 (215)
.... .|+|+++++ |+.|+++||++ +|+|+.+.++. ..+.+.+.++.+++.+++.. .++..+|+.+.+.+++
T Consensus 111 ~~~~--~g~gl~~~~-g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~vd~~~~~~~~t 183 (500)
T PLN02169 111 IFDV--LGEGILTVD-FELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAA---HENIIIDLQDVFMRFM 183 (500)
T ss_pred HHHh--hcCcccccC-cHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCeEeHHHHHHHHH
Confidence 2222 278888887 99999999999 89999988764 34677788888998887653 2456799999999999
Q ss_pred HHHHHHHhhcCC
Q 046418 204 NNIASRCIFGRK 215 (215)
Q Consensus 204 ~~vi~~~~fG~~ 215 (215)
+|+|++++||.+
T Consensus 184 ~dvi~~~~fG~~ 195 (500)
T PLN02169 184 FDTSSILMTGYD 195 (500)
T ss_pred HHHHHhheeCCC
Confidence 999999999964
No 23
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.90 E-value=1.7e-23 Score=168.78 Aligned_cols=157 Identities=33% Similarity=0.622 Sum_probs=133.7
Q ss_pred CCCCCCCccccchhhhc-CCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCchhhHHH--h
Q 046418 53 PPSPPRLPIIGNLHQIL-QNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIATKI--L 129 (215)
Q Consensus 53 ~p~p~~~p~~g~~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~--~ 129 (215)
||||+++|++||.+.+. .++++.++.+++++|||+|++++++.++++++||+.+++++.++...+..++....... .
T Consensus 1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~ 80 (463)
T PF00067_consen 1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG 80 (463)
T ss_dssp SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence 79999999999999984 27788999999999999999999999999999999999999877767766533333322 1
Q ss_pred hhCCCceeeecCChhHHHHHHHHHhhccChh-HHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHHHHH
Q 046418 130 LYDGKDLGFAEYGEYWRQLRKICVLELLSNK-RVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSNNIAS 208 (215)
Q Consensus 130 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~vi~ 208 (215)
...+.++++.+ |+.|+.+|+.+ .+.|+.. ++ .+.+.+.+.++++++.|.+.. +.+..+|+.++++.+++|+++
T Consensus 81 ~~~~~~l~~~~-~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~---~~~~~vd~~~~~~~~~~d~i~ 154 (463)
T PF00067_consen 81 PFGGKGLFFSD-GERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKA---GSSGPVDLFDWLRRFALDVIG 154 (463)
T ss_dssp HHTTTSSTTSS-HHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTT---TSESEEEHHHHHHHHHHHHHH
T ss_pred ccccccccccc-ccccccccccc-cccccccccc-ccccccccccccccccccccc---cccceeeeecccccccccccc
Confidence 23477777776 89999999999 8999998 66 899999999999999999875 233379999999999999999
Q ss_pred HHhhcCC
Q 046418 209 RCIFGRK 215 (215)
Q Consensus 209 ~~~fG~~ 215 (215)
.++||.+
T Consensus 155 ~~~fG~~ 161 (463)
T PF00067_consen 155 RVLFGKD 161 (463)
T ss_dssp HHHHSSH
T ss_pred cccccce
Confidence 9999963
No 24
>PLN02738 carotene beta-ring hydroxylase
Probab=99.89 E-value=2.7e-22 Score=166.94 Aligned_cols=147 Identities=20% Similarity=0.312 Sum_probs=122.9
Q ss_pred ccchhhhcCCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCchhhHHHhhhCCCceeeecC
Q 046418 62 IGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIATKILLYDGKDLGFAEY 141 (215)
Q Consensus 62 ~g~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (215)
.||+..+..+..+..+.+++++||||+++++++.++++++||+.+++++.++...|.++......... .+.++++.+
T Consensus 142 ~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~--~g~~l~~~d- 218 (633)
T PLN02738 142 KGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV--MGKGLIPAD- 218 (633)
T ss_pred cCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc--cCCceecCC-
Confidence 34545554566789999999999999999999999999999999999998777777776433222222 256776655
Q ss_pred ChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHHHHHHHhhcCC
Q 046418 142 GEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSNNIASRCIFGRK 215 (215)
Q Consensus 142 g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~ 215 (215)
|+.|+++|+.+ +|.|+.++++.+.+.+.+++++++++|++.. .+++.+|+.+.+..+++|+|+.++||.+
T Consensus 219 ge~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~---~~g~~vdl~~~~~~lt~DVI~~~~FG~~ 288 (633)
T PLN02738 219 GEIWRVRRRAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAA---SDGEDVEMESLFSRLTLDIIGKAVFNYD 288 (633)
T ss_pred cHHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCcEeHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999 8999999999999999999999999998754 3567899999999999999999999974
No 25
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.89 E-value=2.9e-22 Score=161.99 Aligned_cols=157 Identities=15% Similarity=0.236 Sum_probs=124.1
Q ss_pred CCCCCCCCCCCCCccccchhhhc----CCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCc
Q 046418 47 SNKLNLPPSPPRLPIIGNLHQIL----QNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPR 122 (215)
Q Consensus 47 ~~~~~~~p~p~~~p~~g~~~~~~----~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~ 122 (215)
+++.+.||||+++|++||++.+. ..+++.++.+++++||+||++++++.++|+++||+++++++.+++..|..+..
T Consensus 3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~ 82 (452)
T PLN03141 3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP 82 (452)
T ss_pred CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence 34556788999999999998873 24688999999999999999999999999999999999999988877765432
Q ss_pred hhhHHHhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhH-hHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHH
Q 046418 123 SIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKS-AQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILA 201 (215)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~ 201 (215)
. ....+. ++.++.+.+ |+.|+++|+++ ++.|+..++.. ..+.+.+.++++++.|. ++..+|+.+.+..
T Consensus 83 ~-~~~~l~-g~~~~~~~~-g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 151 (452)
T PLN03141 83 K-SLTELM-GKSSILLIN-GSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR-------DDPPVLVQDETKK 151 (452)
T ss_pred h-hHHHHh-CcccccccC-cHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc-------CCCCEEhHHHHHH
Confidence 2 222232 233455554 99999999999 89998887765 35566666666666553 3457899999999
Q ss_pred HHHHHHHHHhhcC
Q 046418 202 VSNNIASRCIFGR 214 (215)
Q Consensus 202 ~~~~vi~~~~fG~ 214 (215)
++++++++++||.
T Consensus 152 ~~~~vi~~~~~G~ 164 (452)
T PLN03141 152 IAFEVLVKALISL 164 (452)
T ss_pred HHHHHHHHHHcCC
Confidence 9999999999996
No 26
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.89 E-value=6.8e-22 Score=160.25 Aligned_cols=156 Identities=13% Similarity=0.266 Sum_probs=117.1
Q ss_pred CCCCCCCCCCCCCccccchhhhc----CCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCc
Q 046418 47 SNKLNLPPSPPRLPIIGNLHQIL----QNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPR 122 (215)
Q Consensus 47 ~~~~~~~p~p~~~p~~g~~~~~~----~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~ 122 (215)
..+.+.||||.++|++||++++. ..+++.++.+++++||+++++++++.+.++++||+++++++.++...|.++..
T Consensus 26 ~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~ 105 (472)
T PLN02987 26 YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYP 105 (472)
T ss_pred cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCc
Confidence 44556788999999999998863 25688899999999999999999999999999999999999988887866543
Q ss_pred hhhHHHhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHH-HHHHHHHHHHHHHHHhccccCCCCcccHHHHHHH
Q 046418 123 SIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQH-IRVEEVSCLINKIRRSCINVHGRSTINLSEMILA 201 (215)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~ 201 (215)
......+ ++.++++++ |+.|+++|+++ .+.++.+.++.+.. .+.+.+++.++.|. +.+++.+.+.+
T Consensus 106 ~~~~~~l--g~~~l~~~~-g~~wr~~R~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~ 172 (472)
T PLN02987 106 GSISNLL--GKHSLLLMK-GNLHKKMHSLT-MSFANSSIIKDHLLLDIDRLIRFNLDSWS---------SRVLLMEEAKK 172 (472)
T ss_pred HHHHHHh--CcccccccC-cHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHhhc---------cceehHHHHHH
Confidence 3233333 245777775 99999999998 66555555544331 12233333333332 35899999999
Q ss_pred HHHHHHHHHhhcCC
Q 046418 202 VSNNIASRCIFGRK 215 (215)
Q Consensus 202 ~~~~vi~~~~fG~~ 215 (215)
++++++++++||.+
T Consensus 173 ~t~~vi~~~~fg~~ 186 (472)
T PLN02987 173 ITFELTVKQLMSFD 186 (472)
T ss_pred HHHHHHHHHHcCCC
Confidence 99999999999963
No 27
>PLN02936 epsilon-ring hydroxylase
Probab=99.89 E-value=6.1e-22 Score=161.51 Aligned_cols=155 Identities=15% Similarity=0.280 Sum_probs=130.8
Q ss_pred CCCCCCccccchhhhc----CCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCchhhHHHh
Q 046418 54 PSPPRLPIIGNLHQIL----QNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIATKIL 129 (215)
Q Consensus 54 p~p~~~p~~g~~~~~~----~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~~ 129 (215)
-|-.++|++|+.+.+. ++..+..+.+++++|||++++++++.++++++||+++++++++++..|.++.........
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~ 94 (489)
T PLN02936 15 GDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFL 94 (489)
T ss_pred CCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHH
Confidence 4567899999888765 577889999999999999999999999999999999999998777788776543332323
Q ss_pred hhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHH-HHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHHHHH
Q 046418 130 LYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQH-IRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSNNIAS 208 (215)
Q Consensus 130 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~vi~ 208 (215)
. +.++++++ |+.|+++||.+ +|.|+.+++..+.+ .+.++++++++.|.+.. +++.++|+.++++.+++|+++
T Consensus 95 ~--~~~i~~~~-g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~---~~g~~vd~~~~~~~~~~dvi~ 167 (489)
T PLN02936 95 F--GSGFAIAE-GELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVA---LSGEAVNMEAKFSQLTLDVIG 167 (489)
T ss_pred h--cCccccCC-chHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCceeHHHHHHHHHHHHHH
Confidence 2 56776665 99999999999 89999989888765 78889999999998764 346689999999999999999
Q ss_pred HHhhcCC
Q 046418 209 RCIFGRK 215 (215)
Q Consensus 209 ~~~fG~~ 215 (215)
.++||.+
T Consensus 168 ~~~fG~~ 174 (489)
T PLN02936 168 LSVFNYN 174 (489)
T ss_pred HHHcCCC
Confidence 9999974
No 28
>PLN02648 allene oxide synthase
Probab=99.86 E-value=9e-22 Score=159.11 Aligned_cols=159 Identities=13% Similarity=0.160 Sum_probs=125.8
Q ss_pred CCCCCCCCCCCCccccchhhhc----CCChhHHHHHHHhhhCC-eEEEEecCcCe-------EEeccHHHHHHHHHh---
Q 046418 48 NKLNLPPSPPRLPIIGNLHQIL----QNVPHRSLKALSDRYGP-IMLVYFGNSPS-------LVVSSAELASEMMKT--- 112 (215)
Q Consensus 48 ~~~~~~p~p~~~p~~g~~~~~~----~~~~~~~~~~~~~~yG~-v~~~~~~~~~~-------v~i~~p~~i~~il~~--- 112 (215)
.+.+.|||+.++|++|+..++. ..++..++.+.++|||+ ||++.++|.++ |+++||+.++.++.+
T Consensus 14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~ 93 (480)
T PLN02648 14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV 93 (480)
T ss_pred CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence 3456799999999999998642 46668999999999999 99999998665 999999999999974
Q ss_pred -cCcccCCCCchhhHHHhhhCCCc---eeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccC
Q 046418 113 -HDIAFSNRPRSIATKILLYDGKD---LGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVH 188 (215)
Q Consensus 113 -~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (215)
+...+..... .... +. |.+ .+...+|+.|+++||++ .++|+ ..++.+.+.|.+.++++++.|.... .
T Consensus 94 ~~~~~~~~~~~-~~~~-l~--G~~~~~s~~~~~g~~H~r~Rrll-~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~---~ 164 (480)
T PLN02648 94 DKRDVFTGTYM-PSTA-FT--GGYRVLSYLDPSEPKHAKLKSFL-FELLK-SRHRRFIPEFRAAFAELFDTWEAEL---A 164 (480)
T ss_pred cccccceeeec-cCcc-cc--CCceeeeecCCCCchHHHHHHHH-HHHHH-HhhhhhhhHHHHHHHHHHHHHHHHH---h
Confidence 3333333221 1222 22 433 44444599999999999 89999 5778999999999999999996542 2
Q ss_pred CCCcccHHHHHHHHHHHHHHHHhhcCC
Q 046418 189 GRSTINLSEMILAVSNNIASRCIFGRK 215 (215)
Q Consensus 189 ~~~~vdl~~~~~~~~~~vi~~~~fG~~ 215 (215)
++..+|+.+.+.++++|++++++||.+
T Consensus 165 ~~~~vdv~~~~~~lt~~vi~~~lfG~~ 191 (480)
T PLN02648 165 KKGKAEFNDPLDQMAFNFLCKALTGKD 191 (480)
T ss_pred hCCCccccchHHHHHHHHHHHHHcCCC
Confidence 445799999999999999999999963
No 29
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.81 E-value=9.1e-19 Score=137.94 Aligned_cols=165 Identities=18% Similarity=0.225 Sum_probs=133.3
Q ss_pred CCCCCCCCCCCccccchhhh---cCCChhHHHHHHHhhhCCeEEEE-ecCcCeEEeccHHHHHHHHHhcCcccCCCC-ch
Q 046418 49 KLNLPPSPPRLPIIGNLHQI---LQNVPHRSLKALSDRYGPIMLVY-FGNSPSLVVSSAELASEMMKTHDIAFSNRP-RS 123 (215)
Q Consensus 49 ~~~~~p~p~~~p~~g~~~~~---~~~~~~~~~~~~~~~yG~v~~~~-~~~~~~v~i~~p~~i~~il~~~~~~~~~~~-~~ 123 (215)
+...+|+|+.+|++|.+..+ -..+.|+...+.+++|||||+.. +|+...|++.+|++++.++++++. ++.|+ ..
T Consensus 48 ~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~ 126 (519)
T KOG0159|consen 48 PFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLI 126 (519)
T ss_pred ChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCccccc
Confidence 34457999999999988842 24688899999999999999999 888999999999999999986654 46664 22
Q ss_pred h---hHHHhhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHH
Q 046418 124 I---ATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMIL 200 (215)
Q Consensus 124 ~---~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~ 200 (215)
. ..+.......|++..+ |++|++.|+.+....+.+++++.+.|.+++.++++++.+++....+....+.|+.+.+.
T Consensus 127 ~~w~~~rd~~~~~~Gl~~~~-G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~ 205 (519)
T KOG0159|consen 127 EPWVAYRDFRGGVCGLFLLE-GPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELY 205 (519)
T ss_pred chhhhhHHhhccCCCcccCC-CHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHH
Confidence 1 2233444455666666 99999999999555688999999999999999999999998752222334789999999
Q ss_pred HHHHHHHHHHhhcCC
Q 046418 201 AVSNNIASRCIFGRK 215 (215)
Q Consensus 201 ~~~~~vi~~~~fG~~ 215 (215)
+++++.||.++||++
T Consensus 206 ~wslEsi~~V~l~~r 220 (519)
T KOG0159|consen 206 RWSLESICLVLLGTR 220 (519)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999999975
No 30
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.77 E-value=6.7e-17 Score=132.19 Aligned_cols=149 Identities=16% Similarity=0.116 Sum_probs=115.0
Q ss_pred CccccchhhhcCCChhHHHHHHHhhhC-CeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCchh-hHHHhhhCCCce
Q 046418 59 LPIIGNLHQILQNVPHRSLKALSDRYG-PIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSI-ATKILLYDGKDL 136 (215)
Q Consensus 59 ~p~~g~~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~-~~~~~~~~~~~~ 136 (215)
.++.|++... ..+...++..+.++++ ..++++.++. ++++||+.+++++.++...|.+..... ...... |+|+
T Consensus 49 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~--g~gi 123 (502)
T PLN02426 49 AYLTASWAKD-FDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLL--GRGI 123 (502)
T ss_pred CCccHHHHHh-cccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhc--CCce
Confidence 5578888764 3456778878888876 5777766554 899999999999987777787654332 222332 6788
Q ss_pred eeecCChhHHHHHHHHHhhccChhHHhHhH--HHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHHHHHHHhhcC
Q 046418 137 GFAEYGEYWRQLRKICVLELLSNKRVKSAQ--HIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSNNIASRCIFGR 214 (215)
Q Consensus 137 ~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~ 214 (215)
++++ |+.|+++||.+ +|.|+.++++.+. +.+.+.++++++.+.+..+ ++++.++|+.++++++++|+|++++||.
T Consensus 124 ~~~~-g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vd~~~~~~~~t~dvi~~~~fG~ 200 (502)
T PLN02426 124 FNVD-GDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAAD-DGEGAVLDLQDVFRRFSFDNICKFSFGL 200 (502)
T ss_pred eecC-cHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCceEcHHHHHHHHHHHHHHHHHhCC
Confidence 7766 99999999999 8999999998764 6777778888888876531 1124579999999999999999999997
Q ss_pred C
Q 046418 215 K 215 (215)
Q Consensus 215 ~ 215 (215)
+
T Consensus 201 ~ 201 (502)
T PLN02426 201 D 201 (502)
T ss_pred C
Confidence 4
No 31
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.67 E-value=2.6e-15 Score=116.33 Aligned_cols=154 Identities=15% Similarity=0.152 Sum_probs=122.4
Q ss_pred CCCCCCCC-CccccchhhhcCCChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCch-hhHHH
Q 046418 51 NLPPSPPR-LPIIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRS-IATKI 128 (215)
Q Consensus 51 ~~~p~p~~-~p~~g~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~-~~~~~ 128 (215)
+.||.-.+ .|++|+...+ ++++.++++++++|||+||++.++|+.+.++.+|+....++..+..+.+..... .....
T Consensus 31 ~~PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~ 109 (486)
T KOG0684|consen 31 KEPPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTP 109 (486)
T ss_pred CCCcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhh
Confidence 57887665 7999999999 999999999999999999999999999999999999999997664454433222 22223
Q ss_pred hhhCCCceeeecCChhHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHH-HHHhccccCCCCcccHHHHHHHHHHHHH
Q 046418 129 LLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINK-IRRSCINVHGRSTINLSEMILAVSNNIA 207 (215)
Q Consensus 129 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~vdl~~~~~~~~~~vi 207 (215)
.+ |+|+.....+....++.+.+ ..+....+++++.+.|.++..+.++. |.+ ++.+..+.+..+.+.+.+.
T Consensus 110 vF--g~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~------s~~~d~l~~~~~~ii~tAs 180 (486)
T KOG0684|consen 110 VF--GKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE------SGETDGLYTFCRLIIFTAS 180 (486)
T ss_pred hc--CCCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc------ccchhHhhhhhHHHhhhhH
Confidence 33 77888877788999999999 79999999999999999999999987 432 4556666777777766665
Q ss_pred HHHhhcC
Q 046418 208 SRCIFGR 214 (215)
Q Consensus 208 ~~~~fG~ 214 (215)
-.+++|+
T Consensus 181 ~~ll~~e 187 (486)
T KOG0684|consen 181 RLLLGGE 187 (486)
T ss_pred HHhhhhh
Confidence 5555553
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.34 E-value=1.8e-11 Score=98.03 Aligned_cols=130 Identities=15% Similarity=0.183 Sum_probs=100.4
Q ss_pred hhHHHHHHHhhhCCeEEEEecCcC--eEEeccHHHHHHHHHhcCcccCCCCchhh----HHHhhhCCCceeeecCChhHH
Q 046418 73 PHRSLKALSDRYGPIMLVYFGNSP--SLVVSSAELASEMMKTHDIAFSNRPRSIA----TKILLYDGKDLGFAEYGEYWR 146 (215)
Q Consensus 73 ~~~~~~~~~~~yG~v~~~~~~~~~--~v~i~~p~~i~~il~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~w~ 146 (215)
.......+.+.||.++.+...++. .+++++++.+++++.++. .+++...... .... .+.+.+.+.+|+.|+
T Consensus 24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~ll~~dg~~H~ 100 (411)
T COG2124 24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPV--LGDGSLLTLDGPEHT 100 (411)
T ss_pred hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhh--ccccceeecCCHHHH
Confidence 445666778888888888776655 899999999999997653 2222211111 1222 255534444599999
Q ss_pred HHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHHHHHHHhhcC
Q 046418 147 QLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSNNIASRCIFGR 214 (215)
Q Consensus 147 ~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~ 214 (215)
++||++ +++|+++.++.+.+.+.+.++++++.+ .. . +.+++.+.+..+++++|+ .+||.
T Consensus 101 r~Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~-----~-~~~~v~~~a~~l~~~vi~-~l~Gv 159 (411)
T COG2124 101 RLRKLL-APAFTPRALRGYRPLIREIADRLLDDL-WQ-----G-GADLVLDFAAELTLRVIA-ELLGV 159 (411)
T ss_pred HHHHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-cc-----C-CchhHHHHhhhhhHHHHH-HHhCC
Confidence 999999 899999999999999999999999999 42 3 788999999999999999 99996
No 33
>cd08780 Death_TRADD Death Domain of Tumor Necrosis Factor Receptor 1-Associated Death Domain protein. Death domain (DD) of TRADD (TNF Receptor 1-Associated Death Domain or TNFRSF1A-associated via death domain) protein. TRADD is a central signaling adaptor for TNF-receptor 1 (TNFR1), mediating activation of Nuclear Factor -kappaB (NF-kB) and c-Jun N-terminal kinase (JNK), as well as caspase-dependent apoptosis. It also carries important immunological roles including germinal center formation, DR3-mediated T-cell stimulation, and TNFalpha-mediated inflammatory responses. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into s
Probab=82.80 E-value=7.8 Score=23.89 Aligned_cols=68 Identities=12% Similarity=0.177 Sum_probs=46.0
Q ss_pred ChhHHHHHHHHHh---hccChhHHhHhH-----HHHHHHHHHHHHHHHHhccccCCCC-cccHHHHHHHHHHHHHHHHhh
Q 046418 142 GEYWRQLRKICVL---ELLSNKRVKSAQ-----HIRVEEVSCLINKIRRSCINVHGRS-TINLSEMILAVSNNIASRCIF 212 (215)
Q Consensus 142 g~~w~~~Rk~~~~---~~f~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~vdl~~~~~~~~~~vi~~~~f 212 (215)
|..||+.=|.+ . .+++...+.... +-+.+.+.+++.+|.+.. +... .-.+...+...-++.+...++
T Consensus 13 Gr~WK~laR~L-g~~cral~d~~ID~I~~~y~r~gL~EqvyQ~L~~W~~~e---g~~Atv~~Lv~AL~~c~l~~lAe~l~ 88 (90)
T cd08780 13 GKKWKPVGRSL-QKNCRALRDPAIDNLAYEYDREGLYEQAYQLLRRFIQSE---GKKATLQRLVQALEENGLTSLAEDLL 88 (90)
T ss_pred hHHHHHHHHHH-cccccccchhHHHHHHhhcccccHHHHHHHHHHHHHHhc---cccchHHHHHHHHHHccchHHHHHHh
Confidence 89999997777 6 337777776643 447889999999999863 1222 234566666666666666555
Q ss_pred c
Q 046418 213 G 213 (215)
Q Consensus 213 G 213 (215)
|
T Consensus 89 ~ 89 (90)
T cd08780 89 G 89 (90)
T ss_pred c
Confidence 4
No 34
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=76.35 E-value=14 Score=23.70 Aligned_cols=59 Identities=24% Similarity=0.354 Sum_probs=39.2
Q ss_pred CCCCCCCCCCccccchhhhcCCChhHHHHHHHhhhCCeEEEEec------CcCeEEeccHHHHHHHHH
Q 046418 50 LNLPPSPPRLPIIGNLHQILQNVPHRSLKALSDRYGPIMLVYFG------NSPSLVVSSAELASEMMK 111 (215)
Q Consensus 50 ~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~------~~~~v~i~~p~~i~~il~ 111 (215)
.+.||-....-++.|++. +=..+.+.++.-+||+|..+++| |.-+|+-.|-..++..+.
T Consensus 11 ~rlppevnriLyirNLp~---~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~d 75 (124)
T KOG0114|consen 11 IRLPPEVNRILYIRNLPF---KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACD 75 (124)
T ss_pred CCCChhhheeEEEecCCc---cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHH
Confidence 344444444445555542 23446777888899999999986 456777777777777764
No 35
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=72.38 E-value=26 Score=29.06 Aligned_cols=50 Identities=16% Similarity=0.156 Sum_probs=29.0
Q ss_pred CChhHHHHHHHh-hhCCeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCC
Q 046418 71 NVPHRSLKALSD-RYGPIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNR 120 (215)
Q Consensus 71 ~~~~~~~~~~~~-~yG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~ 120 (215)
.++...++-..+ +||.|++-.+-++.+-|=.=|+.-++-++++.+.|...
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp 259 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLP 259 (534)
T ss_pred CCchhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhcc
Confidence 455566666655 67888876655555544344444455555566666543
No 36
>PHA03049 IMV membrane protein; Provisional
Probab=69.54 E-value=17 Score=20.98 Aligned_cols=15 Identities=20% Similarity=0.368 Sum_probs=6.2
Q ss_pred HHhhcCCCCCCCCCC
Q 046418 42 KLSRSSNKLNLPPSP 56 (215)
Q Consensus 42 ~~~~~~~~~~~~p~p 56 (215)
.+.+.+.....+|.|
T Consensus 22 iYnkk~~~q~~~p~~ 36 (68)
T PHA03049 22 IYNKKTTTSQNPPSQ 36 (68)
T ss_pred HHhcccccCCCCCCh
Confidence 334444443444443
No 37
>TIGR00807 malonate_madL malonate transporter, MadL subunit. The MSS family includes the monobasic malonate:Na+ symporter of Malonomonas rubra. It consists of two integral membrane proteins, MadL and MadM. The transporter is believed to catalyze the electroneutral reversible uptake of H+-malonate with one Na+, and both subunits have been shown to be essential for activity.
Probab=69.12 E-value=15 Score=24.01 Aligned_cols=14 Identities=21% Similarity=0.304 Sum_probs=9.6
Q ss_pred CcchHHHHhhhCCC
Q 046418 1 MALPLVLMKQLQPF 14 (215)
Q Consensus 1 ~~~~~~~~~~~~~~ 14 (215)
|++|.+..+.-|+.
T Consensus 70 MYIPIVVAMAA~QN 83 (125)
T TIGR00807 70 MYIPIVVAMAAGQN 83 (125)
T ss_pred cHhHHHHHHhhhch
Confidence 78898876655543
No 38
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=61.28 E-value=4.8 Score=26.88 Aligned_cols=13 Identities=8% Similarity=0.125 Sum_probs=5.4
Q ss_pred HHHHHHHHhhcCC
Q 046418 36 TLVHLLKLSRSSN 48 (215)
Q Consensus 36 ~~~~~~~~~~~~~ 48 (215)
++++...+..+++
T Consensus 14 l~~~~~~~~~rRR 26 (130)
T PF12273_consen 14 LFLFLFYCHNRRR 26 (130)
T ss_pred HHHHHHHHHHHHH
Confidence 3344444544433
No 39
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=56.92 E-value=33 Score=22.15 Aligned_cols=10 Identities=40% Similarity=0.438 Sum_probs=6.9
Q ss_pred Cccccchhhh
Q 046418 59 LPIIGNLHQI 68 (215)
Q Consensus 59 ~p~~g~~~~~ 68 (215)
-|+.||+...
T Consensus 46 ~p~YgNL~~~ 55 (107)
T PF15330_consen 46 DPCYGNLELQ 55 (107)
T ss_pred Cccccccccc
Confidence 6778887654
No 40
>cd08318 Death_NMPP84 Death domain of Nuclear Matrix Protein P84. Death domain (DD) found in the Nuclear Matrix Protein P84 (also known as HPR1 or THOC1). HPR1/p84 resides in the nuclear matrix and is part of the THO complex, also called TREX (transcription/export) complex, which functions in mRNP biogenesis at the interface between transcription and export of mRNA from the nucleus. Mice lacking THOC1 have abnormal testis development and are sterile. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=55.73 E-value=46 Score=20.38 Aligned_cols=63 Identities=16% Similarity=0.174 Sum_probs=39.3
Q ss_pred ChhHHHHHHHHHhhccChhHHhHhH---HHHHHHHHHHHHHHHHhccccCCCCcc-cHHHHHHHHHHHHHHHH
Q 046418 142 GEYWRQLRKICVLELLSNKRVKSAQ---HIRVEEVSCLINKIRRSCINVHGRSTI-NLSEMILAVSNNIASRC 210 (215)
Q Consensus 142 g~~w~~~Rk~~~~~~f~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v-dl~~~~~~~~~~vi~~~ 210 (215)
|..|+++=+.+ .|+...+.... +-..+.+.+++..|.+.. +.+.++ .+.+.++..-.+-+.+.
T Consensus 18 G~~Wk~Lar~L---Gls~~dI~~i~~~~~~~~eq~~~mL~~W~~r~---g~~AT~~~L~~aL~~~~~~diae~ 84 (86)
T cd08318 18 GEDWKTLAPHL---EMKDKEIRAIESDSEDIKMQAKQLLVAWQDRE---GSQATPETLITALNAAGLNEIAES 84 (86)
T ss_pred hhhHHHHHHHc---CCCHHHHHHHHhcCCCHHHHHHHHHHHHHHhc---CccccHHHHHHHHHHcCcHHHHHh
Confidence 89999986666 56766665544 234688999999999873 222333 34555555544444443
No 41
>PF03817 MadL: Malonate transporter MadL subunit; InterPro: IPR004690 The MSS family includes the monobasic malonate:Na+ symporter of Malonomonas rubra. It consists of two integral membrane proteins, MadL and MadM. The transporter is believed to catalyze the electroneutral reversible uptake of H+-malonate with one Na+, and both subunits have been shown to be essential for activity.
Probab=49.85 E-value=46 Score=21.88 Aligned_cols=14 Identities=29% Similarity=0.392 Sum_probs=9.3
Q ss_pred CcchHHHHhhhCCC
Q 046418 1 MALPLVLMKQLQPF 14 (215)
Q Consensus 1 ~~~~~~~~~~~~~~ 14 (215)
|++|.++.+.-|+.
T Consensus 70 mYIPIVVAMAA~QN 83 (125)
T PF03817_consen 70 MYIPIVVAMAAQQN 83 (125)
T ss_pred cHHHHHHHHhhhhh
Confidence 78888866655443
No 42
>PF13625 Helicase_C_3: Helicase conserved C-terminal domain
Probab=46.37 E-value=43 Score=22.22 Aligned_cols=39 Identities=23% Similarity=0.355 Sum_probs=30.1
Q ss_pred CChhHHHHHHHhhhCCeEEEEecCcCeEEeccHHHHHHHHH
Q 046418 71 NVPHRSLKALSDRYGPIMLVYFGNSPSLVVSSAELASEMMK 111 (215)
Q Consensus 71 ~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~i~~il~ 111 (215)
.+....+.+|.++||.+--. .+...+...|++.++++..
T Consensus 74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~ 112 (129)
T PF13625_consen 74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLA 112 (129)
T ss_pred HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHh
Confidence 34557899999999987543 1466778899999999985
No 43
>PHA01327 hypothetical protein
Probab=45.62 E-value=7.8 Score=19.91 Aligned_cols=16 Identities=25% Similarity=0.447 Sum_probs=12.2
Q ss_pred eeecCChhHHHHHHHH
Q 046418 137 GFAEYGEYWRQLRKIC 152 (215)
Q Consensus 137 ~~~~~g~~w~~~Rk~~ 152 (215)
+..+.|++|++.|..+
T Consensus 14 vinehge~wqer~drm 29 (49)
T PHA01327 14 VINEHGEEWQERKDRM 29 (49)
T ss_pred HHHhhHHHHHHHHHHH
Confidence 3445699999988777
No 44
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=45.21 E-value=28 Score=27.10 Aligned_cols=9 Identities=22% Similarity=0.512 Sum_probs=3.4
Q ss_pred HHHHHHHhh
Q 046418 37 LVHLLKLSR 45 (215)
Q Consensus 37 ~~~~~~~~~ 45 (215)
+++.++++|
T Consensus 275 IYLILRYRR 283 (299)
T PF02009_consen 275 IYLILRYRR 283 (299)
T ss_pred HHHHHHHHH
Confidence 333334333
No 45
>PF13893 RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=42.28 E-value=57 Score=17.57 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=23.2
Q ss_pred HHHHhhhCCeEEEEecCc----CeEEeccHHHHHHHHH
Q 046418 78 KALSDRYGPIMLVYFGNS----PSLVVSSAELASEMMK 111 (215)
Q Consensus 78 ~~~~~~yG~v~~~~~~~~----~~v~i~~p~~i~~il~ 111 (215)
.+..++||+|..+.+..+ -.|-..+++.++....
T Consensus 2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~ 39 (56)
T PF13893_consen 2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE 39 (56)
T ss_dssp HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 467789999988876543 3445568888777764
No 46
>cd08777 Death_RIP1 Death Domain of Receptor-Interacting Protein 1. Death domain (DD) found in Receptor-Interacting Protein 1 (RIP1) and related proteins. RIP kinases serve as essential sensors of cellular stress. Vertebrates contain several types containing a homologous N-terminal kinase domain and varying C-terminal domains. RIP1 harbors a C-terminal DD, which binds death receptors (DRs) including TNF receptor 1, Fas, TNF-related apoptosis-inducing ligand receptor 1 (TRAILR1), and TRAILR2. It also interacts with other DD-containing adaptor proteins such as TRADD and FADD. RIP1 plays a crucial role in determining a cell's fate, between survival or death, following exposure to stress signals. It is important in the signaling of NF-kappaB and MAPKs, and it links DR-associated signaling to reactive oxygen species (ROS) production. Abnormal RIP1 function may result in ROS accumulation affecting inflammatory responses, innate immunity, stress responses, and cell survival. In general, DDs ar
Probab=41.08 E-value=85 Score=19.25 Aligned_cols=40 Identities=15% Similarity=0.305 Sum_probs=31.9
Q ss_pred ChhHHHHHHHHHhhccChhHHhHhHHH-----HHHHHHHHHHHHHHhc
Q 046418 142 GEYWRQLRKICVLELLSNKRVKSAQHI-----RVEEVSCLINKIRRSC 184 (215)
Q Consensus 142 g~~w~~~Rk~~~~~~f~~~~l~~~~~~-----~~~~~~~~~~~~~~~~ 184 (215)
|..|+..=+.+ .|+...+..+..- +.+.+.+++..|.+..
T Consensus 13 G~~Wk~lar~L---G~s~~eI~~ie~~~~r~~~~eq~~~mL~~W~~r~ 57 (86)
T cd08777 13 GKKWKRCARKL---GFTESEIEEIDHDYERDGLKEKVHQMLHKWKMKE 57 (86)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Confidence 89999997777 4888888876633 5778999999999863
No 47
>PRK12333 nucleoside triphosphate pyrophosphohydrolase; Reviewed
Probab=37.73 E-value=94 Score=22.70 Aligned_cols=45 Identities=16% Similarity=0.160 Sum_probs=32.1
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHHHHHHHhh
Q 046418 161 RVKSAQHIRVEEVSCLINKIRRSCINVHGRSTINLSEMILAVSNNIASRCIF 212 (215)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~vi~~~~f 212 (215)
...++.+.+.+++.++++.+.. +...++.+.+..+.++|+...-.
T Consensus 24 T~~SL~~yllEE~yEv~dAI~~-------~d~~~l~EELGDlLlqVvfha~i 68 (204)
T PRK12333 24 THESLRPYLLEEAAEAVDALSE-------GDPQELAEELGDVLLQVAFHSVI 68 (204)
T ss_pred CHHHHHHHHHHHHHHHHHHHHc-------CCHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677778888888888874 34567888888877777766544
No 48
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=35.53 E-value=47 Score=18.31 Aligned_cols=17 Identities=18% Similarity=0.263 Sum_probs=14.8
Q ss_pred CCeEEEEecCcCeEEec
Q 046418 85 GPIMLVYFGNSPSLVVS 101 (215)
Q Consensus 85 G~v~~~~~~~~~~v~i~ 101 (215)
|+++++..||+.+.+..
T Consensus 4 GDvV~LKSGGp~MTV~~ 20 (53)
T PF09926_consen 4 GDVVQLKSGGPRMTVTE 20 (53)
T ss_pred CCEEEEccCCCCeEEEE
Confidence 89999999999988763
No 49
>PF08780 NTase_sub_bind: Nucleotidyltransferase substrate binding protein like; InterPro: IPR010235 The member of this family from Haemophilus influenzae, HI0074, has been shown by crystal structure to resemble nucleotidyltransferase substrate binding proteins []. It forms a complex with HI0073 (P43933 from SWISSPROT), encoded by the adjacent gene, which contains a nucleotidyltransferase nucleotide binding domain (IPR002934 from INTERPRO). Double- and single-stranded DNA binding assays showed no evidence of DNA binding to HI0074 or to HI0073/HI0074 complex despite the suggestive shape of the putative binding cleft formed by the HI0074 dimer []. ; PDB: 1WWP_A 1JOG_A 1WTY_C 2YWA_B.
Probab=34.43 E-value=1.4e+02 Score=19.75 Aligned_cols=35 Identities=14% Similarity=0.223 Sum_probs=22.9
Q ss_pred CCceeeecCChhHHHH---HHHHHhhccChhHHhHhHHHHH
Q 046418 133 GKDLGFAEYGEYWRQL---RKICVLELLSNKRVKSAQHIRV 170 (215)
Q Consensus 133 ~~~~~~~~~g~~w~~~---Rk~~~~~~f~~~~l~~~~~~~~ 170 (215)
..|++ ++++.|.+. |..+ ++.++..........+.
T Consensus 71 ~~glI--~d~e~Wl~m~~~RN~t-sHtYde~~a~~i~~~I~ 108 (124)
T PF08780_consen 71 KAGLI--DDGEIWLDMLEDRNLT-SHTYDEETAEEIYERIP 108 (124)
T ss_dssp HTTSS--SHHHHHHHHHHHHHHG-GGTTSHHHHHHHHHTHH
T ss_pred HcCCC--CCHHHHHHHHHHhccc-cCCCCHHHHHHHHHHHH
Confidence 45665 448999876 6667 78888776555544444
No 50
>cd01670 Death Death Domain: a protein-protein interaction domain. Death Domains (DDs) are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. Structural analysis of DD-DD complexes show that the domains interact with each other in many different ways. DD-containing proteins serve as adaptors in signaling pathways and they can recruit other proteins into signaling complexes. In mammals, they are prominent components of the programmed cell death (apoptosis) pathway and are found in a number of other signaling pathways. In invertebrates, they are involved in transcriptional regulation of zygotic patterning genes in insect embryogenesis, and are components of the ToII/NF-kappaB pathway, a conserved innate immune pathway in a
Probab=29.45 E-value=1.2e+02 Score=17.62 Aligned_cols=40 Identities=20% Similarity=0.255 Sum_probs=29.4
Q ss_pred ChhHHHHHHHHHhhccChhHHhHhHHH---HHHHHHHHHHHHHHhc
Q 046418 142 GEYWRQLRKICVLELLSNKRVKSAQHI---RVEEVSCLINKIRRSC 184 (215)
Q Consensus 142 g~~w~~~Rk~~~~~~f~~~~l~~~~~~---~~~~~~~~~~~~~~~~ 184 (215)
|..|++.=+.+ . ++...+...... ..+.+.+++..|.+..
T Consensus 10 g~~W~~la~~L-g--l~~~~I~~i~~~~~~~~~~~~~mL~~W~~~~ 52 (79)
T cd01670 10 GKDWKKLARKL-G--LSDGEIDQIEEDNPRVREQAYQLLLKWEERE 52 (79)
T ss_pred hhHHHHHHHHh-C--CCHHHHHHHHHhCCCHHHHHHHHHHHHHhcc
Confidence 68999987776 3 666666655433 4688999999998863
No 51
>TIGR02736 cbb3_Q_epsi cytochrome c oxidase, cbb3-type, CcoQ subunit, epsilon-Proteobacterial. Members of this protein family are restricted to the epsilon branch of the Proteobacteria. All members are found in operons containing the other three structural subunits of the cbb3 type of cytochrome c oxidase. These small proteins show remote sequence similarity to the CcoQ subunit in other cytochrome c oxidase systems, so this family is assumed to represent the epsilonproteobacterial variant of CcoQ.
Probab=29.42 E-value=1.1e+02 Score=17.07 Aligned_cols=10 Identities=0% Similarity=-0.356 Sum_probs=3.6
Q ss_pred HHHHHHHHhh
Q 046418 36 TLVHLLKLSR 45 (215)
Q Consensus 36 ~~~~~~~~~~ 45 (215)
+.++++.++.
T Consensus 16 YgY~yhLYrs 25 (56)
T TIGR02736 16 YAYIYHLYRS 25 (56)
T ss_pred HHHHHHhhhh
Confidence 3333333333
No 52
>PF15206 FAM209: FAM209 family
Probab=28.28 E-value=52 Score=22.25 Aligned_cols=16 Identities=25% Similarity=0.248 Sum_probs=10.0
Q ss_pred CCCCCCCCCCCCCccc
Q 046418 47 SNKLNLPPSPPRLPII 62 (215)
Q Consensus 47 ~~~~~~~p~p~~~p~~ 62 (215)
+..-+.|||..++++-
T Consensus 62 K~keq~p~glrg~~fr 77 (150)
T PF15206_consen 62 KNKEQSPPGLRGCSFR 77 (150)
T ss_pred cccccCCCccCcccCC
Confidence 3444668887776663
No 53
>PF05172 Nup35_RRM: Nup53/35/40-type RNA recognition motif; InterPro: IPR007846 The MPPN (Mitotic PhosphoProtein N end) family is uncharacterised however it probably plays a role in the cell cycle because the family includes mitotic phosphoproteins O13026 from SWISSPROT []. This family also includes Q05166 from SWISSPROT a suppressor of thermosensitive mutations in the DNA polymerase delta gene, Pol III []. The conserved central region appears to be distantly related to the RNA-binding region RNP-1 (RNA recognition motif, IPR000504 from INTERPRO), suggesting an RNA binding function for this protein.; PDB: 1WWH_C 3P3D_A.
Probab=24.60 E-value=2e+02 Score=18.33 Aligned_cols=47 Identities=11% Similarity=0.171 Sum_probs=32.0
Q ss_pred ChhHHHHHHHhhhCCeEEEE--------------ecCcCeEEec--cHHHHHHHHHhcCcccC
Q 046418 72 VPHRSLKALSDRYGPIMLVY--------------FGNSPSLVVS--SAELASEMMKTHDIAFS 118 (215)
Q Consensus 72 ~~~~~~~~~~~~yG~v~~~~--------------~~~~~~v~i~--~p~~i~~il~~~~~~~~ 118 (215)
.......+..++||.|.... ..+.+++.|. ++..++..|++++..+.
T Consensus 17 ~~~~~Vl~~F~~~G~Ile~~~~~~~~~~~~~~~~~~~~NWi~I~Y~~~~~A~rAL~~NG~i~~ 79 (100)
T PF05172_consen 17 SASNQVLRHFSSFGTILEHFEVLRSSSGINPYPIPSGGNWIHITYDNPLSAQRALQKNGTIFS 79 (100)
T ss_dssp GGHHHHHHHHHCCS-EECEEGGG----------E-CCTTEEEEEESSHHHHHHHHTTTTEEET
T ss_pred HHHHHHHHHHHhcceEEEeecccccccccccccCCCCCCEEEEECCCHHHHHHHHHhCCeEEc
Confidence 34556677778889887764 3456666554 88889999987777654
No 54
>PF07912 ERp29_N: ERp29, N-terminal domain; InterPro: IPR012883 ERp29 (P52555 from SWISSPROT) is a ubiquitously expressed endoplasmic reticulum protein, and is involved in the processes of protein maturation and protein secretion in this organelle [, ]. The protein exists as a homodimer, with each monomer being composed of two domains. The N-terminal domain featured in this family is organised into a thioredoxin-like fold that resembles the a domain of human protein disulphide isomerase (PDI) []. However, this domain lacks the C-X-X-C motif required for the redox function of PDI; it is therefore thought that the function of ERp29 is similar to the chaperone function of PDI []. The N-terminal domain is exclusively responsible for the homodimerisation of the protein, without covalent linkages or additional contacts with other domains []. ; GO: 0009306 protein secretion, 0005788 endoplasmic reticulum lumen; PDB: 2QC7_B 1G7E_A 2C0G_B 1OVN_A 2C0F_A 2C0E_A 2C1Y_B.
Probab=23.99 E-value=2.3e+02 Score=18.93 Aligned_cols=41 Identities=17% Similarity=0.442 Sum_probs=25.5
Q ss_pred HHHHhhhC------CeEEEEecC-cCeEEe-----ccHHHHHHHHHhcCcccC
Q 046418 78 KALSDRYG------PIMLVYFGN-SPSLVV-----SSAELASEMMKTHDIAFS 118 (215)
Q Consensus 78 ~~~~~~yG------~v~~~~~~~-~~~v~i-----~~p~~i~~il~~~~~~~~ 118 (215)
.++.++|| |++.+..++ .+-+-. ...+.++..++.+...|-
T Consensus 71 ~~Laery~i~ke~fPv~~LF~~~~~~pv~~p~~~~~t~~~l~~fvk~~t~~yi 123 (126)
T PF07912_consen 71 MELAERYKIDKEDFPVIYLFVGDKEEPVRYPFDGDVTADNLQRFVKSNTGLYI 123 (126)
T ss_dssp HHHHHHTT-SCCC-SEEEEEESSTTSEEEE-TCS-S-HHHHHHHHHHTSS--T
T ss_pred HHHHHHhCCCcccCCEEEEecCCCCCCccCCccCCccHHHHHHHHHhCCCeee
Confidence 67788887 888887754 444434 345677887776655554
No 55
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=23.51 E-value=2.5e+02 Score=19.09 Aligned_cols=41 Identities=10% Similarity=0.062 Sum_probs=30.6
Q ss_pred ChhHHHHHHHhhhCCeEEEEec---------CcCeEEeccHHHHHHHHHh
Q 046418 72 VPHRSLKALSDRYGPIMLVYFG---------NSPSLVVSSAELASEMMKT 112 (215)
Q Consensus 72 ~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~i~~p~~i~~il~~ 112 (215)
-..+.+.++.++||+|..+.+. +--+|-..+++.++.++..
T Consensus 46 ~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~ 95 (144)
T PLN03134 46 TDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 (144)
T ss_pred CCHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 4457788888999998777653 2356677899999998863
No 56
>TIGR01661 ELAV_HUD_SF ELAV/HuD family splicing factor. These proteins contain 3 RNA-recognition motifs (rrm: pfam00076).
Probab=22.97 E-value=2.6e+02 Score=21.90 Aligned_cols=55 Identities=13% Similarity=0.141 Sum_probs=36.1
Q ss_pred cccchhhhcCCChhHHHHHHHhhhCCeEEEEecCc---------CeEEeccHHHHHHHHHh-cCcccC
Q 046418 61 IIGNLHQILQNVPHRSLKALSDRYGPIMLVYFGNS---------PSLVVSSAELASEMMKT-HDIAFS 118 (215)
Q Consensus 61 ~~g~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~---------~~v~i~~p~~i~~il~~-~~~~~~ 118 (215)
++||+.. .-..+.+.++..+||+|..+.+... -+|...+++.+...+.. ++..+.
T Consensus 273 fV~NL~~---~~~e~~L~~~F~~fG~v~~v~i~~d~~t~~skG~aFV~F~~~~~A~~Ai~~lnG~~~~ 337 (352)
T TIGR01661 273 FVYNLSP---DTDETVLWQLFGPFGAVQNVKIIRDLTTNQCKGYGFVSMTNYDEAAMAILSLNGYTLG 337 (352)
T ss_pred EEeCCCC---CCCHHHHHHHHHhCCCeEEEEEeEcCCCCCccceEEEEECCHHHHHHHHHHhCCCEEC
Confidence 4555542 2445678888899999988876432 27778888887777643 444443
No 57
>PF14198 TnpV: Transposon-encoded protein TnpV
Probab=22.55 E-value=2.3e+02 Score=18.40 Aligned_cols=40 Identities=13% Similarity=0.147 Sum_probs=26.1
Q ss_pred hHHHHHHHHHhhccChhHHhHhHHHHHHHHHHHHHHHHHh
Q 046418 144 YWRQLRKICVLELLSNKRVKSAQHIRVEEVSCLINKIRRS 183 (215)
Q Consensus 144 ~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~ 183 (215)
.++.+|+...........|..+...+++.|.++++.+.+.
T Consensus 33 yLke~~p~~Y~~ll~~g~L~~~l~eid~~A~e~~e~l~~q 72 (111)
T PF14198_consen 33 YLKEHKPILYNNLLLSGKLNEHLAEIDEQAQERFERLVEQ 72 (111)
T ss_pred HHHHhHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555554455556667777788888888888876543
No 58
>PLN02196 abscisic acid 8'-hydroxylase
Probab=22.24 E-value=2e+02 Score=23.76 Aligned_cols=13 Identities=8% Similarity=-0.445 Sum_probs=5.8
Q ss_pred hhcCCCCCCCCCC
Q 046418 44 SRSSNKLNLPPSP 56 (215)
Q Consensus 44 ~~~~~~~~~~p~p 56 (215)
.+.....+.|++.
T Consensus 31 ~~~~~~Ppgp~~~ 43 (463)
T PLN02196 31 STKLPLPPGTMGW 43 (463)
T ss_pred CCCCCCCCCCCCC
Confidence 4454444444443
No 59
>PF12385 Peptidase_C70: Papain-like cysteine protease AvrRpt2; InterPro: IPR022118 This is a family of cysteine proteases, found in actinobacteria, protobacteria and firmicutes. Papain-like cysteine proteases play a crucial role in plant-pathogen/pest interactions. On entering the host they act on non-self substrates, thereby manipulating the host to evade proteolysis []. AvrRpt2 from Pseudomonas syringae pv tomato DC3000 triggers resistance to P. syringae-2-dependent defence responses, including hypersensitive cell death, by cleaving the Arabidopsis RIN4 protein which is monitored by the cognate resistance protein RPS2 [].
Probab=21.47 E-value=1.8e+02 Score=20.42 Aligned_cols=29 Identities=21% Similarity=0.299 Sum_probs=18.8
Q ss_pred hHHHHHHHhhhCCeE-EEEecCc----CeEEecc
Q 046418 74 HRSLKALSDRYGPIM-LVYFGNS----PSLVVSS 102 (215)
Q Consensus 74 ~~~~~~~~~~yG~v~-~~~~~~~----~~v~i~~ 102 (215)
.+.+..+.++|||+. ..+..+. .++||+.
T Consensus 98 ~e~~~~LL~~yGPLwv~~~~P~~~~~~H~~ViTG 131 (166)
T PF12385_consen 98 AEGLANLLREYGPLWVAWEAPGDSWVAHASVITG 131 (166)
T ss_pred HHHHHHHHHHcCCeEEEecCCCCcceeeEEEEEe
Confidence 478889999999975 4444443 3445543
No 60
>KOG3718 consensus Carnitine O-acyltransferase CROT [Lipid transport and metabolism]
Probab=20.12 E-value=3.8e+02 Score=22.71 Aligned_cols=67 Identities=13% Similarity=0.137 Sum_probs=39.5
Q ss_pred CeEEEEecCcCeEEeccHHHHHHHHHhcCcccCCCCchhhHHHhhhCCCceeeecCChhHHHHHHHHHhhccChhHHh
Q 046418 86 PIMLVYFGNSPSLVVSSAELASEMMKTHDIAFSNRPRSIATKILLYDGKDLGFAEYGEYWRQLRKICVLELLSNKRVK 163 (215)
Q Consensus 86 ~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~ 163 (215)
..|.+.+....-.++..|+.+...+.-... ....+... .-.-+++++.+.|.+.|.-++ ..+.+++.
T Consensus 199 r~fkfd~~hEdd~~l~~peel~nllk~~k~-~ssep~gc--------~v~~LTs~eRd~WA~nRe~Li--~~s~aN~e 265 (609)
T KOG3718|consen 199 RQFKFDCVHEDDTILSAPEELVNLLKVRKI-LSSEPLGC--------CVPTLTSDERDTWARNRERLI--EISVANKE 265 (609)
T ss_pred cEEEEEeeccCCcccCCHHHHHHHHHHHHh-ccCCCCCc--------chhccccccccHHHHHHHHHH--hcChhhHH
Confidence 334444555566678889999998853332 22222110 223445566899999999983 34555543
No 61
>cd08307 Death_Pelle Death domain of the protein kinase Pelle. Death domain (DD) of the protein kinase Pelle from Drosophila melanogaster and simlar proteins. In Drosophila, interaction between the DDs of Tube and Pelle is an important component of the Toll pathway, which functions in establishing dorsoventral polarity in embryos and in mediating innate immune responses to pathogens. Tube and Pelle transmit the signal from the Toll receptor to the Dorsal/Cactus complex. Pelle also functions in photoreceptor axon targeting. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=20.10 E-value=2.4e+02 Score=17.80 Aligned_cols=58 Identities=14% Similarity=0.131 Sum_probs=38.4
Q ss_pred CChhHHHHHHHHHhhccChhHHhHhHHHHH---HHHHHHHHHHHHhccccCCCCcccHHHHHHHHHHH
Q 046418 141 YGEYWRQLRKICVLELLSNKRVKSAQHIRV---EEVSCLINKIRRSCINVHGRSTINLSEMILAVSNN 205 (215)
Q Consensus 141 ~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~ 205 (215)
.++.|+.+=..+ +.++...++....... .-+++++..|.+. +.+..++.+.+.+.-+-
T Consensus 20 ~~~~W~~LA~~i--~~ys~~~v~~i~~~~~~g~SPt~eLL~~WG~~-----n~Tv~~L~~~L~k~kl~ 80 (97)
T cd08307 20 TDNVWEELAFVM--MGYSNDDVEGIQRCCLRGRSPTEELLDIWGNK-----NHTITELFVLLYREKLF 80 (97)
T ss_pred CcCcHHHHHHHH--hcCCHHHHHHHHHHHcCCCChHHHHHHHHhhc-----CCCHHHHHHHHHHhchH
Confidence 367888887766 4567777766655544 4588999999663 44456777776665433
Done!