Query 046420
Match_columns 69
No_of_seqs 12 out of 14
Neff 1.8
Searched_HMMs 13730
Date Mon Mar 25 21:01:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046420.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046420hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1sgva1 b.122.1.1 (A:236-292) 14.9 12 0.00084 20.3 -0.6 12 33-44 15-26 (57)
2 d1xoda1 b.55.1.4 (A:10-123) Sp 11.8 32 0.0023 20.6 0.7 10 33-42 15-24 (114)
3 d1zl8a1 a.194.1.1 (A:4-53) Lin 11.6 37 0.0027 18.5 0.9 13 43-58 13-25 (50)
4 d1mvma_ b.121.5.2 (A:) Parvovi 10.4 66 0.0048 23.9 2.2 37 28-66 75-113 (549)
5 d1q6ha_ d.26.1.1 (A:) Peptidyl 9.9 38 0.0028 20.6 0.6 13 53-65 192-204 (210)
6 d1y74a1 a.194.1.1 (A:17-73) Li 9.4 44 0.0032 18.6 0.7 13 43-58 14-26 (57)
7 d1x6ha2 g.37.1.1 (A:8-43) Tran 7.3 51 0.0037 15.5 0.3 12 17-28 25-36 (36)
8 d1kt1a2 d.26.1.1 (A:28-138) FK 7.1 67 0.0049 17.4 0.8 13 53-65 93-105 (111)
9 d2ppna1 d.26.1.1 (A:1-107) FK- 6.9 63 0.0046 17.3 0.6 13 53-65 89-101 (107)
10 d1fd9a_ d.26.1.1 (A:) Macropha 6.9 62 0.0045 19.4 0.6 13 53-65 184-196 (204)
No 1
>d1sgva1 b.122.1.1 (A:236-292) Pseudouridine synthase II TruB, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=14.94 E-value=12 Score=20.34 Aligned_cols=12 Identities=33% Similarity=0.490 Sum_probs=9.7
Q ss_pred CCCcchhhhhhh
Q 046420 33 SNGRWLQSAWLQ 44 (69)
Q Consensus 33 snGRWlQSaglq 44 (69)
++||||-.+|..
T Consensus 15 ~~Gr~L~~~g~~ 26 (57)
T d1sgva1 15 ANGRSLPAVGID 26 (57)
T ss_dssp HTTCCCBCCCCC
T ss_pred HcCCccCcCCCC
Confidence 789999988753
No 2
>d1xoda1 b.55.1.4 (A:10-123) Sprouty-related, EVH1 domain-containing protein 1, Spred-1 {Western clawed frog (Xenopus tropicalis) [TaxId: 8364]}
Probab=11.77 E-value=32 Score=20.60 Aligned_cols=10 Identities=50% Similarity=0.800 Sum_probs=8.2
Q ss_pred CCCcchhhhh
Q 046420 33 SNGRWLQSAW 42 (69)
Q Consensus 33 snGRWlQSag 42 (69)
++++|+..+|
T Consensus 15 ~tk~W~P~gg 24 (114)
T d1xoda1 15 SSGGWLQLGG 24 (114)
T ss_dssp SSSCEEEGGG
T ss_pred CCCceEecCC
Confidence 7888998765
No 3
>d1zl8a1 a.194.1.1 (A:4-53) Lin-7 {Caenorhabditis elegans [TaxId: 6239]}
Probab=11.56 E-value=37 Score=18.49 Aligned_cols=13 Identities=23% Similarity=0.631 Sum_probs=9.4
Q ss_pred hhhhhhccCCCCCCCe
Q 046420 43 LQHLQQSSATGTIPPL 58 (69)
Q Consensus 43 lqhlq~s~~~G~~~~~ 58 (69)
+.+||.+ |.|||-
T Consensus 13 le~Lq~s---gevp~~ 25 (50)
T d1zl8a1 13 MEHVQKT---GEVNNA 25 (50)
T ss_dssp HHHHGGG---SSSTHH
T ss_pred HHHHHHc---CCCChH
Confidence 5667766 899974
No 4
>d1mvma_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid protein {Murine minute virus, strain i [TaxId: 10794]}
Probab=10.43 E-value=66 Score=23.90 Aligned_cols=37 Identities=24% Similarity=0.447 Sum_probs=28.8
Q ss_pred cccCCCCCcchhhhhhhhhhhccCCCCCCC--eeeeheehh
Q 046420 28 FLESSSNGRWLQSAWLQHLQQSSATGTIPP--LQVSIFEVL 66 (69)
Q Consensus 28 fld~ssnGRWlQSaglqhlq~s~~~G~~~~--~~~~~~~~~ 66 (69)
..|++.=+.||++.-.|+|...- .+|-| |.|.||+|.
T Consensus 75 y~D~N~~~~hfsP~DwQ~l~n~~--~~irpksl~v~I~ni~ 113 (549)
T d1mvma_ 75 LVDANAWGVWLQPSDWQYICNTM--SQLNLVSLDQEIFNVV 113 (549)
T ss_dssp EECCCSSTTTCCHHHHHHHHHHB--SEECCCCEEEEEEEEE
T ss_pred eecccceecccCHHHHHHHHHhc--cceecceeEEEEEEEE
Confidence 46777889999999999998654 55554 788888863
No 5
>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]}
Probab=9.90 E-value=38 Score=20.59 Aligned_cols=13 Identities=38% Similarity=0.713 Sum_probs=11.2
Q ss_pred CCCCCeeeeheeh
Q 046420 53 GTIPPLQVSIFEV 65 (69)
Q Consensus 53 G~~~~~~~~~~~~ 65 (69)
++|||-..-||||
T Consensus 192 ~~Ippns~Lvfev 204 (210)
T d1q6ha_ 192 PGIPPNSTLVFDV 204 (210)
T ss_dssp TTBCTTCCEEEEE
T ss_pred CCCCcCCcEEEEE
Confidence 5799999999976
No 6
>d1y74a1 a.194.1.1 (A:17-73) Lin-7 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=9.40 E-value=44 Score=18.57 Aligned_cols=13 Identities=54% Similarity=1.014 Sum_probs=9.4
Q ss_pred hhhhhhccCCCCCCCe
Q 046420 43 LQHLQQSSATGTIPPL 58 (69)
Q Consensus 43 lqhlq~s~~~G~~~~~ 58 (69)
+.+||.+ |.+||-
T Consensus 14 le~LQ~~---gevp~~ 26 (57)
T d1y74a1 14 LERLQRS---GELPPQ 26 (57)
T ss_dssp HHHHHHH---TCSCHH
T ss_pred HHHHHHc---CCCChH
Confidence 5677775 889874
No 7
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.34 E-value=51 Score=15.49 Aligned_cols=12 Identities=17% Similarity=0.420 Sum_probs=8.1
Q ss_pred eehhhhcccccc
Q 046420 17 VHHQRQWSSEKF 28 (69)
Q Consensus 17 vHHQRQ~Sdnnf 28 (69)
.-|+|...++||
T Consensus 25 ~~H~r~H~~~~f 36 (36)
T d1x6ha2 25 DMHFKRYHDPNF 36 (36)
T ss_dssp HHHHHHTTCSSC
T ss_pred HHhCcccCCCCC
Confidence 347787777665
No 8
>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=7.10 E-value=67 Score=17.39 Aligned_cols=13 Identities=38% Similarity=0.519 Sum_probs=10.4
Q ss_pred CCCCCeeeeheeh
Q 046420 53 GTIPPLQVSIFEV 65 (69)
Q Consensus 53 G~~~~~~~~~~~~ 65 (69)
+.|||-..-||||
T Consensus 93 ~~IPp~s~lif~i 105 (111)
T d1kt1a2 93 PKIPSNATLFFEV 105 (111)
T ss_dssp TTSCTTCCCEEEE
T ss_pred CcCCcCCeEEEEE
Confidence 5689988888876
No 9
>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.93 E-value=63 Score=17.32 Aligned_cols=13 Identities=46% Similarity=0.953 Sum_probs=10.3
Q ss_pred CCCCCeeeeheeh
Q 046420 53 GTIPPLQVSIFEV 65 (69)
Q Consensus 53 G~~~~~~~~~~~~ 65 (69)
+-|||-..-||||
T Consensus 89 ~~IPp~s~lif~i 101 (107)
T d2ppna1 89 GIIPPHATLVFDV 101 (107)
T ss_dssp TTBCTTCCEEEEE
T ss_pred CCCCcCCeEEEEE
Confidence 5689888888876
No 10
>d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Legionella pneumophila [TaxId: 446]}
Probab=6.92 E-value=62 Score=19.40 Aligned_cols=13 Identities=38% Similarity=0.733 Sum_probs=10.9
Q ss_pred CCCCCeeeeheeh
Q 046420 53 GTIPPLQVSIFEV 65 (69)
Q Consensus 53 G~~~~~~~~~~~~ 65 (69)
+.|||-..-||||
T Consensus 184 ~~Ipp~s~l~fev 196 (204)
T d1fd9a_ 184 GPIGPNETLIFKI 196 (204)
T ss_dssp SSCCTTCCEEEEE
T ss_pred CCcCcCCcEEEEE
Confidence 4599999999986
Done!