Query 046427
Match_columns 595
No_of_seqs 477 out of 2932
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 21:06:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046427.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046427hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygy_A PGDH, D-3-phosphoglycer 100.0 2E-100 5E-105 852.1 59.9 525 51-595 2-528 (529)
2 1sc6_A PGDH, D-3-phosphoglycer 100.0 1.7E-78 5.8E-83 652.3 43.3 391 52-593 3-403 (404)
3 3k5p_A D-3-phosphoglycerate de 100.0 1.5E-72 5E-77 604.5 41.9 396 48-593 10-415 (416)
4 4g2n_A D-isomer specific 2-hyd 100.0 3.2E-69 1.1E-73 568.4 38.6 314 49-365 24-345 (345)
5 4e5n_A Thermostable phosphite 100.0 3.3E-68 1.1E-72 558.9 36.4 315 52-367 1-328 (330)
6 4dgs_A Dehydrogenase; structur 100.0 2E-67 6.9E-72 553.6 30.2 311 49-365 26-340 (340)
7 3kb6_A D-lactate dehydrogenase 100.0 7.3E-67 2.5E-71 549.3 29.6 274 90-365 39-328 (334)
8 2pi1_A D-lactate dehydrogenase 100.0 6.7E-66 2.3E-70 542.0 27.8 310 55-366 2-329 (334)
9 3gg9_A D-3-phosphoglycerate de 100.0 4.3E-65 1.5E-69 538.9 33.7 317 54-374 3-342 (352)
10 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 2.3E-64 7.7E-69 530.4 35.4 309 52-362 25-334 (335)
11 4hy3_A Phosphoglycerate oxidor 100.0 8E-65 2.7E-69 537.9 31.1 311 52-366 26-349 (365)
12 3jtm_A Formate dehydrogenase, 100.0 1.4E-64 4.9E-69 534.4 31.8 314 52-366 18-342 (351)
13 3hg7_A D-isomer specific 2-hyd 100.0 4E-65 1.4E-69 532.9 26.2 310 52-369 4-315 (324)
14 2yq5_A D-isomer specific 2-hyd 100.0 1.1E-64 3.9E-69 533.3 28.7 312 54-367 2-334 (343)
15 1wwk_A Phosphoglycerate dehydr 100.0 1.8E-63 6E-68 518.6 35.2 305 52-357 2-307 (307)
16 3evt_A Phosphoglycerate dehydr 100.0 5.2E-65 1.8E-69 532.7 23.2 310 53-368 1-314 (324)
17 1j4a_A D-LDH, D-lactate dehydr 100.0 2.1E-62 7.3E-67 515.9 33.8 310 54-366 2-332 (333)
18 1gdh_A D-glycerate dehydrogena 100.0 2E-61 6.9E-66 505.8 38.1 305 54-361 2-315 (320)
19 2ekl_A D-3-phosphoglycerate de 100.0 1.2E-61 4.2E-66 505.9 36.0 303 54-360 6-312 (313)
20 1dxy_A D-2-hydroxyisocaproate 100.0 1.9E-62 6.4E-67 516.2 28.8 310 55-367 2-331 (333)
21 2nac_A NAD-dependent formate d 100.0 2.4E-61 8.1E-66 515.9 35.3 297 68-365 61-366 (393)
22 2j6i_A Formate dehydrogenase; 100.0 4.2E-62 1.4E-66 519.0 29.0 314 51-365 15-348 (364)
23 2cuk_A Glycerate dehydrogenase 100.0 2.7E-61 9.1E-66 502.9 34.3 304 54-364 1-310 (311)
24 1xdw_A NAD+-dependent (R)-2-hy 100.0 7.8E-62 2.7E-66 511.2 30.2 308 55-365 2-331 (331)
25 2d0i_A Dehydrogenase; structur 100.0 6.6E-61 2.2E-65 504.5 33.9 313 52-367 1-320 (333)
26 2w2k_A D-mandelate dehydrogena 100.0 1E-60 3.5E-65 506.0 35.3 319 52-371 2-344 (348)
27 3ba1_A HPPR, hydroxyphenylpyru 100.0 1.2E-60 4.1E-65 501.9 34.3 309 51-365 21-333 (333)
28 1mx3_A CTBP1, C-terminal bindi 100.0 3.7E-60 1.3E-64 500.6 34.5 310 51-361 19-339 (347)
29 2dbq_A Glyoxylate reductase; D 100.0 9E-60 3.1E-64 496.3 36.1 312 52-365 1-322 (334)
30 2gcg_A Glyoxylate reductase/hy 100.0 2.7E-59 9.3E-64 491.9 35.5 315 51-365 6-329 (330)
31 3pp8_A Glyoxylate/hydroxypyruv 100.0 3E-60 1E-64 495.0 27.0 297 52-366 2-311 (315)
32 1qp8_A Formate dehydrogenase; 100.0 1.1E-58 3.7E-63 481.4 26.8 293 55-367 2-298 (303)
33 3oet_A Erythronate-4-phosphate 100.0 6.7E-57 2.3E-61 478.1 28.6 279 52-360 2-286 (381)
34 3gvx_A Glycerate dehydrogenase 100.0 1.8E-56 6.1E-61 461.1 22.0 278 55-360 2-285 (290)
35 2o4c_A Erythronate-4-phosphate 100.0 4.1E-54 1.4E-58 457.9 29.4 281 54-362 1-285 (380)
36 1v8b_A Adenosylhomocysteinase; 100.0 1.2E-38 4E-43 347.1 0.2 271 115-413 192-473 (479)
37 3d64_A Adenosylhomocysteinase; 100.0 9.1E-39 3.1E-43 349.1 -2.7 270 115-413 212-488 (494)
38 3d4o_A Dipicolinate synthase s 100.0 3.6E-28 1.2E-32 250.9 15.4 207 50-286 2-248 (293)
39 3ce6_A Adenosylhomocysteinase; 99.9 1E-27 3.4E-32 262.7 0.5 268 116-413 210-488 (494)
40 2rir_A Dipicolinate synthase, 99.9 1.1E-25 3.8E-30 233.0 13.9 209 52-286 6-250 (300)
41 2vhw_A Alanine dehydrogenase; 99.9 4.7E-23 1.6E-27 220.0 20.2 245 62-338 18-307 (377)
42 2eez_A Alanine dehydrogenase; 99.8 7.2E-19 2.4E-23 187.1 15.0 276 62-365 18-341 (369)
43 1gtm_A Glutamate dehydrogenase 99.8 3.8E-20 1.3E-24 199.2 4.0 155 187-356 206-386 (419)
44 1x13_A NAD(P) transhydrogenase 99.8 1.6E-18 5.5E-23 186.3 14.6 220 62-289 25-301 (401)
45 1l7d_A Nicotinamide nucleotide 99.7 2.3E-17 8E-22 176.3 17.5 220 62-286 18-300 (384)
46 3h9u_A Adenosylhomocysteinase; 99.7 2.1E-17 7.2E-22 177.2 14.4 155 123-295 155-312 (436)
47 3n58_A Adenosylhomocysteinase; 99.7 1.2E-16 4.2E-21 171.0 13.0 154 123-294 191-347 (464)
48 3ggo_A Prephenate dehydrogenas 99.7 2.3E-17 8E-22 171.7 5.4 242 189-446 30-292 (314)
49 1gpj_A Glutamyl-tRNA reductase 99.7 8.3E-18 2.8E-22 181.0 0.4 210 115-358 80-325 (404)
50 3gvp_A Adenosylhomocysteinase 99.6 2.4E-15 8E-20 161.0 13.2 152 123-292 164-318 (435)
51 3ktd_A Prephenate dehydrogenas 99.6 3.6E-17 1.2E-21 172.0 -2.0 247 192-446 8-271 (341)
52 2g5c_A Prephenate dehydrogenas 99.5 6.3E-15 2.2E-19 150.1 7.1 219 193-427 2-241 (281)
53 3b1f_A Putative prephenate deh 99.4 7.1E-14 2.4E-18 142.9 1.9 227 193-435 7-257 (290)
54 2pv7_A T-protein [includes: ch 99.3 1.1E-13 3.8E-18 142.7 -1.9 227 170-436 4-246 (298)
55 3obb_A Probable 3-hydroxyisobu 99.3 5.6E-12 1.9E-16 130.3 9.4 114 193-308 4-121 (300)
56 3l6d_A Putative oxidoreductase 99.2 8.7E-12 3E-16 129.0 8.3 114 188-301 5-120 (306)
57 4dll_A 2-hydroxy-3-oxopropiona 99.2 8.4E-12 2.9E-16 129.9 8.3 130 172-301 6-143 (320)
58 4gbj_A 6-phosphogluconate dehy 99.2 9.7E-12 3.3E-16 128.3 8.5 113 193-307 6-120 (297)
59 1c1d_A L-phenylalanine dehydro 99.2 5.7E-11 2E-15 125.0 13.2 108 187-301 169-279 (355)
60 4ezb_A Uncharacterized conserv 99.2 4.4E-11 1.5E-15 124.4 12.0 137 171-312 5-151 (317)
61 4e12_A Diketoreductase; oxidor 99.2 1.5E-10 5.2E-15 118.2 15.5 129 193-333 5-161 (283)
62 2f1k_A Prephenate dehydrogenas 99.2 6.6E-12 2.3E-16 127.4 5.2 215 193-425 1-235 (279)
63 3doj_A AT3G25530, dehydrogenas 99.2 2.7E-11 9.3E-16 125.4 9.7 115 187-301 16-134 (310)
64 3p2y_A Alanine dehydrogenase/p 99.2 3.3E-10 1.1E-14 120.0 17.7 221 62-287 40-309 (381)
65 3qsg_A NAD-binding phosphogluc 99.2 6.6E-11 2.3E-15 122.7 11.5 126 172-299 2-134 (312)
66 3qha_A Putative oxidoreductase 99.2 4.8E-11 1.6E-15 122.8 9.6 108 192-301 15-124 (296)
67 4e21_A 6-phosphogluconate dehy 99.2 9.1E-11 3.1E-15 124.1 11.7 121 190-312 20-145 (358)
68 3pef_A 6-phosphogluconate dehy 99.2 6.3E-11 2.2E-15 121.0 9.4 109 193-301 2-114 (287)
69 2iaf_A Hypothetical protein SD 99.1 1.3E-11 4.4E-16 114.0 3.4 114 380-507 9-145 (151)
70 2d5c_A AROE, shikimate 5-dehyd 99.1 1.6E-11 5.3E-16 124.2 4.0 176 81-298 37-220 (263)
71 4dio_A NAD(P) transhydrogenase 99.1 8.2E-10 2.8E-14 117.9 17.1 222 62-288 43-320 (405)
72 1np3_A Ketol-acid reductoisome 99.1 1.3E-11 4.5E-16 129.5 3.1 136 188-333 12-155 (338)
73 3ond_A Adenosylhomocysteinase; 99.1 2.8E-10 9.6E-15 123.8 13.4 145 123-285 209-355 (488)
74 3g0o_A 3-hydroxyisobutyrate de 99.1 9.4E-11 3.2E-15 120.8 8.7 110 192-301 7-121 (303)
75 3pdu_A 3-hydroxyisobutyrate de 99.1 7.6E-11 2.6E-15 120.4 7.5 109 193-301 2-114 (287)
76 2h78_A Hibadh, 3-hydroxyisobut 99.1 1.9E-10 6.6E-15 118.1 8.8 109 193-301 4-116 (302)
77 2hk9_A Shikimate dehydrogenase 99.0 2.8E-10 9.6E-15 115.9 6.2 165 81-283 48-222 (275)
78 4gwg_A 6-phosphogluconate dehy 98.9 1.8E-09 6.1E-14 118.3 10.6 119 193-312 5-133 (484)
79 1zej_A HBD-9, 3-hydroxyacyl-CO 98.9 3.2E-09 1.1E-13 109.2 11.3 127 190-332 10-146 (293)
80 1vpd_A Tartronate semialdehyde 98.9 1.2E-09 4.1E-14 111.7 8.0 109 193-301 6-118 (299)
81 3dtt_A NADP oxidoreductase; st 98.9 4.4E-10 1.5E-14 112.4 4.5 100 180-282 7-124 (245)
82 2dpo_A L-gulonate 3-dehydrogen 98.9 5.8E-09 2E-13 108.5 13.2 128 193-332 7-162 (319)
83 3fr7_A Putative ketol-acid red 98.9 1E-09 3.6E-14 118.6 6.6 104 177-284 39-156 (525)
84 2cvz_A Dehydrogenase, 3-hydrox 98.9 2.4E-09 8.2E-14 108.7 8.7 106 193-300 2-108 (289)
85 2gf2_A Hibadh, 3-hydroxyisobut 98.9 1.7E-09 5.9E-14 110.3 7.6 106 193-298 1-110 (296)
86 3cky_A 2-hydroxymethyl glutara 98.9 2E-09 6.9E-14 110.1 8.1 107 193-299 5-115 (301)
87 1yb4_A Tartronic semialdehyde 98.9 1.8E-09 6.2E-14 110.0 7.5 106 193-299 4-113 (295)
88 2yjz_A Metalloreductase steap4 98.4 1.8E-10 6.2E-15 112.0 0.0 94 190-287 17-110 (201)
89 2zyd_A 6-phosphogluconate dehy 98.9 4.8E-09 1.6E-13 115.1 10.8 111 190-301 13-132 (480)
90 3k6j_A Protein F01G10.3, confi 98.9 1.5E-08 5.2E-13 110.1 14.5 166 145-331 11-204 (460)
91 2uyy_A N-PAC protein; long-cha 98.8 6E-09 2.1E-13 107.6 9.4 107 193-299 31-141 (316)
92 2p4q_A 6-phosphogluconate dehy 98.8 9.2E-09 3.1E-13 113.3 11.2 109 192-301 10-128 (497)
93 1i36_A Conserved hypothetical 98.8 5.9E-09 2E-13 104.7 8.7 102 193-299 1-105 (264)
94 2iz1_A 6-phosphogluconate dehy 98.8 1.7E-08 5.9E-13 110.5 10.7 108 193-301 6-122 (474)
95 1leh_A Leucine dehydrogenase; 98.8 1.2E-08 4E-13 107.9 8.8 106 189-301 170-278 (364)
96 2pgd_A 6-phosphogluconate dehy 98.8 1.8E-08 6.1E-13 110.6 10.4 117 193-310 3-129 (482)
97 3c24_A Putative oxidoreductase 98.7 2E-08 6.8E-13 102.3 7.8 92 193-286 12-105 (286)
98 3d1l_A Putative NADP oxidoredu 98.7 1.4E-08 4.7E-13 102.2 6.4 100 187-288 5-108 (266)
99 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.7 3.9E-08 1.3E-12 107.8 10.5 117 193-310 2-131 (478)
100 2vns_A Metalloreductase steap3 98.7 2.1E-08 7.3E-13 98.1 7.5 94 191-288 27-121 (215)
101 2q3e_A UDP-glucose 6-dehydroge 98.7 3.5E-08 1.2E-12 107.9 9.9 134 193-328 6-181 (467)
102 1pjc_A Protein (L-alanine dehy 98.6 5.8E-07 2E-11 94.9 17.5 181 93-283 66-268 (361)
103 3gt0_A Pyrroline-5-carboxylate 98.6 2.1E-07 7.3E-12 92.7 12.8 103 193-299 3-112 (247)
104 2raf_A Putative dinucleotide-b 98.6 5.1E-08 1.7E-12 95.1 7.9 81 187-286 14-94 (209)
105 3pid_A UDP-glucose 6-dehydroge 98.6 1.5E-07 5E-12 101.7 12.0 114 186-301 30-172 (432)
106 1f0y_A HCDH, L-3-hydroxyacyl-C 98.6 4.9E-07 1.7E-11 92.8 14.0 114 193-310 16-161 (302)
107 3oj0_A Glutr, glutamyl-tRNA re 98.6 1.1E-07 3.8E-12 86.7 7.8 87 192-284 21-112 (144)
108 2ahr_A Putative pyrroline carb 98.5 3.9E-07 1.3E-11 91.1 10.4 101 193-301 4-108 (259)
109 2izz_A Pyrroline-5-carboxylate 98.5 1.4E-07 4.9E-12 97.9 7.5 104 191-298 21-132 (322)
110 3mog_A Probable 3-hydroxybutyr 98.5 5.1E-07 1.7E-11 99.0 11.5 116 193-313 6-148 (483)
111 3dfu_A Uncharacterized protein 98.5 2.1E-07 7.3E-12 92.2 7.6 70 192-282 6-75 (232)
112 1yqg_A Pyrroline-5-carboxylate 98.4 2E-07 7E-12 93.2 6.8 103 193-303 1-108 (263)
113 3tri_A Pyrroline-5-carboxylate 98.4 7E-07 2.4E-11 90.9 10.8 109 192-304 3-119 (280)
114 3gg2_A Sugar dehydrogenase, UD 98.4 6.3E-07 2.1E-11 97.5 10.4 105 193-298 3-138 (450)
115 1zcj_A Peroxisomal bifunctiona 98.4 1.9E-06 6.4E-11 94.1 13.6 114 192-310 37-175 (463)
116 4a7p_A UDP-glucose dehydrogena 98.4 1E-06 3.5E-11 95.6 10.8 105 193-298 9-145 (446)
117 1mv8_A GMD, GDP-mannose 6-dehy 98.4 5.9E-07 2E-11 97.2 8.6 105 193-298 1-140 (436)
118 2i99_A MU-crystallin homolog; 98.4 9.4E-07 3.2E-11 91.4 9.5 90 191-286 134-230 (312)
119 2rcy_A Pyrroline carboxylate r 98.3 1.1E-06 3.9E-11 87.7 8.3 98 192-299 4-106 (262)
120 1jay_A Coenzyme F420H2:NADP+ o 98.3 7.4E-07 2.5E-11 86.2 6.7 114 193-313 1-136 (212)
121 1dlj_A UDP-glucose dehydrogena 98.3 3.1E-06 1.1E-10 90.6 11.9 106 193-301 1-136 (402)
122 1bg6_A N-(1-D-carboxylethyl)-L 98.3 2E-06 6.8E-11 89.7 10.1 103 193-298 5-124 (359)
123 3p2o_A Bifunctional protein fo 98.3 5.4E-06 1.8E-10 84.2 12.8 81 187-286 155-236 (285)
124 2ew2_A 2-dehydropantoate 2-red 98.3 1.1E-06 3.8E-11 89.6 7.6 107 193-302 4-127 (316)
125 2y0c_A BCEC, UDP-glucose dehyd 98.3 1.9E-06 6.6E-11 94.3 9.8 105 192-297 8-143 (478)
126 1y7p_A Hypothetical protein AF 98.2 2.3E-06 7.9E-11 82.9 8.5 72 522-593 5-79 (223)
127 4huj_A Uncharacterized protein 98.2 1.8E-06 6.2E-11 84.5 7.8 108 193-304 24-147 (220)
128 1txg_A Glycerol-3-phosphate de 98.2 1.7E-06 6E-11 89.3 7.6 90 193-285 1-107 (335)
129 1wdk_A Fatty oxidation complex 98.2 4E-06 1.4E-10 96.2 11.0 113 193-310 315-454 (715)
130 3k96_A Glycerol-3-phosphate de 98.2 2.3E-06 7.8E-11 90.2 8.3 105 192-298 29-153 (356)
131 3ojo_A CAP5O; rossmann fold, c 98.2 5E-06 1.7E-10 89.7 10.5 107 190-296 9-143 (431)
132 2o3j_A UDP-glucose 6-dehydroge 98.1 3.5E-06 1.2E-10 92.4 8.8 105 193-298 10-151 (481)
133 2wtb_A MFP2, fatty acid multif 98.1 8.4E-06 2.9E-10 93.6 12.3 113 193-310 313-452 (725)
134 1evy_A Glycerol-3-phosphate de 98.1 9.7E-07 3.3E-11 92.9 3.8 91 194-285 17-127 (366)
135 1x0v_A GPD-C, GPDH-C, glycerol 98.1 2.8E-06 9.7E-11 88.7 7.3 92 193-286 9-128 (354)
136 3g79_A NDP-N-acetyl-D-galactos 98.1 4.7E-06 1.6E-10 91.1 8.8 102 193-294 19-159 (478)
137 3ado_A Lambda-crystallin; L-gu 98.1 2.2E-05 7.5E-10 81.4 13.3 175 192-387 6-209 (319)
138 1z82_A Glycerol-3-phosphate de 98.0 4.7E-06 1.6E-10 86.7 6.9 86 192-284 14-113 (335)
139 1y81_A Conserved hypothetical 98.0 5.6E-06 1.9E-10 75.4 6.5 101 190-301 12-117 (138)
140 3ulk_A Ketol-acid reductoisome 98.0 8.9E-06 3E-10 86.7 8.8 93 189-284 34-133 (491)
141 1yj8_A Glycerol-3-phosphate de 98.0 3.3E-06 1.1E-10 89.3 5.6 90 193-284 22-143 (375)
142 2qyt_A 2-dehydropantoate 2-red 98.0 2.6E-06 8.9E-11 87.2 4.5 106 193-301 9-135 (317)
143 3c85_A Putative glutathione-re 98.0 4.6E-06 1.6E-10 78.8 5.4 94 188-283 35-140 (183)
144 2dc1_A L-aspartate dehydrogena 98.0 1.1E-05 3.7E-10 79.8 8.2 95 194-299 2-101 (236)
145 1ks9_A KPA reductase;, 2-dehyd 98.0 4.6E-06 1.6E-10 84.1 5.6 102 193-297 1-111 (291)
146 1b0a_A Protein (fold bifunctio 98.0 1.3E-05 4.3E-10 81.6 8.2 81 187-286 154-235 (288)
147 4a26_A Putative C-1-tetrahydro 98.0 1.2E-05 4E-10 82.3 7.8 81 187-286 160-243 (300)
148 2c2x_A Methylenetetrahydrofola 97.9 1.9E-05 6.4E-10 80.0 8.9 81 187-286 153-236 (281)
149 3ghy_A Ketopantoate reductase 97.9 7.8E-06 2.7E-10 85.1 6.3 110 192-304 3-144 (335)
150 4a5o_A Bifunctional protein fo 97.9 1.6E-05 5.5E-10 80.7 8.3 81 187-286 156-237 (286)
151 3l07_A Bifunctional protein fo 97.9 1.8E-05 6.2E-10 80.3 8.7 81 187-286 156-237 (285)
152 3ngx_A Bifunctional protein fo 97.9 1.8E-05 6.1E-10 80.0 8.4 77 190-285 148-225 (276)
153 1a4i_A Methylenetetrahydrofola 97.9 2.4E-05 8.2E-10 80.0 9.4 82 186-286 159-241 (301)
154 2i76_A Hypothetical protein; N 97.9 2.6E-06 8.8E-11 86.3 1.8 85 193-284 3-91 (276)
155 3phh_A Shikimate dehydrogenase 97.9 2.3E-05 7.8E-10 79.4 8.5 92 192-285 118-212 (269)
156 2ko1_A CTR148A, GTP pyrophosph 97.9 3.3E-05 1.1E-09 63.8 8.0 69 524-594 8-79 (88)
157 3i83_A 2-dehydropantoate 2-red 97.9 4E-05 1.4E-09 79.2 10.1 107 193-303 3-125 (320)
158 1edz_A 5,10-methylenetetrahydr 97.9 9.2E-06 3.1E-10 84.1 5.0 93 186-284 171-277 (320)
159 2duw_A Putative COA-binding pr 97.9 9.4E-06 3.2E-10 74.5 4.5 101 192-301 13-118 (145)
160 2egg_A AROE, shikimate 5-dehyd 97.9 4.6E-05 1.6E-09 78.2 10.1 105 189-298 138-254 (297)
161 3don_A Shikimate dehydrogenase 97.8 1.6E-05 5.4E-10 80.9 6.5 107 189-299 114-226 (277)
162 3hdj_A Probable ornithine cycl 97.8 5E-05 1.7E-09 78.6 10.1 89 191-285 120-216 (313)
163 3fwz_A Inner membrane protein 97.8 2.3E-05 7.9E-10 70.9 6.3 89 193-283 8-106 (140)
164 2g1u_A Hypothetical protein TM 97.8 3.3E-05 1.1E-09 71.0 6.7 98 186-285 13-121 (155)
165 3hn2_A 2-dehydropantoate 2-red 97.7 7.7E-05 2.6E-09 76.8 9.8 107 193-304 3-124 (312)
166 3u62_A Shikimate dehydrogenase 97.7 4.8E-05 1.6E-09 76.3 7.7 100 190-299 107-214 (253)
167 1x7d_A Ornithine cyclodeaminas 97.7 8.9E-05 3E-09 77.9 9.4 91 191-285 128-229 (350)
168 3hwr_A 2-dehydropantoate 2-red 97.7 6.8E-05 2.3E-09 77.5 8.3 107 190-302 17-138 (318)
169 1lss_A TRK system potassium up 97.6 0.00011 3.9E-09 65.1 8.1 88 192-281 4-102 (140)
170 3llv_A Exopolyphosphatase-rela 97.6 0.00011 3.9E-09 66.0 7.6 66 191-256 5-80 (141)
171 3ic5_A Putative saccharopine d 97.6 8.4E-05 2.9E-09 63.9 5.7 87 191-282 4-100 (118)
172 3mtj_A Homoserine dehydrogenas 97.5 0.0004 1.4E-08 75.1 11.7 105 193-301 11-130 (444)
173 2z2v_A Hypothetical protein PH 97.5 9.5E-05 3.2E-09 78.1 6.4 107 188-301 12-126 (365)
174 3o8q_A Shikimate 5-dehydrogena 97.5 0.0001 3.4E-09 75.1 6.3 95 188-285 122-224 (281)
175 3vtf_A UDP-glucose 6-dehydroge 97.5 0.00026 8.8E-09 76.5 9.7 133 193-327 22-193 (444)
176 1omo_A Alanine dehydrogenase; 97.5 0.00026 8.9E-09 73.4 9.0 87 191-284 124-219 (322)
177 2hmt_A YUAA protein; RCK, KTN, 97.4 9.7E-05 3.3E-09 65.8 4.8 94 190-285 4-107 (144)
178 3ego_A Probable 2-dehydropanto 97.4 0.00018 6.1E-09 73.9 7.1 105 193-303 3-119 (307)
179 3zwc_A Peroxisomal bifunctiona 97.4 0.0011 3.6E-08 76.2 14.0 174 193-387 317-514 (742)
180 3c7a_A Octopine dehydrogenase; 97.4 0.00018 6.1E-09 76.6 7.1 87 193-281 3-115 (404)
181 1nyt_A Shikimate 5-dehydrogena 97.4 0.00036 1.2E-08 70.4 8.9 93 189-285 116-217 (271)
182 4hkt_A Inositol 2-dehydrogenas 97.4 0.00043 1.5E-08 71.5 9.5 65 193-257 4-74 (331)
183 1p77_A Shikimate 5-dehydrogena 97.4 0.00017 5.9E-09 72.8 6.0 70 189-258 116-192 (272)
184 2ewd_A Lactate dehydrogenase,; 97.4 0.00035 1.2E-08 72.0 8.4 104 192-296 4-135 (317)
185 1vl6_A Malate oxidoreductase; 97.3 0.0013 4.5E-08 69.4 12.0 111 187-305 187-316 (388)
186 2f1f_A Acetolactate synthase i 97.3 0.00043 1.5E-08 64.8 7.3 72 522-593 4-77 (164)
187 3euw_A MYO-inositol dehydrogen 97.3 0.00063 2.1E-08 70.7 9.2 65 193-257 5-76 (344)
188 3db2_A Putative NADPH-dependen 97.3 0.00067 2.3E-08 70.8 9.3 66 193-258 6-78 (354)
189 1hyh_A L-hicdh, L-2-hydroxyiso 97.2 0.00035 1.2E-08 71.7 6.9 64 193-257 2-80 (309)
190 1a5z_A L-lactate dehydrogenase 97.2 0.00079 2.7E-08 69.6 9.4 65 193-258 1-79 (319)
191 2qrj_A Saccharopine dehydrogen 97.2 0.00023 7.8E-09 75.5 5.3 82 192-282 214-300 (394)
192 3pwz_A Shikimate dehydrogenase 97.2 0.00072 2.5E-08 68.5 8.6 95 187-284 115-217 (272)
193 1guz_A Malate dehydrogenase; o 97.2 0.00087 3E-08 69.0 9.4 63 193-256 1-79 (310)
194 1xea_A Oxidoreductase, GFO/IDH 97.2 0.0011 3.6E-08 68.3 9.5 102 194-300 4-114 (323)
195 4b4u_A Bifunctional protein fo 97.2 0.00085 2.9E-08 68.5 8.5 79 186-283 173-252 (303)
196 3uuw_A Putative oxidoreductase 97.2 0.00097 3.3E-08 68.1 9.1 102 193-299 7-116 (308)
197 3e9m_A Oxidoreductase, GFO/IDH 97.1 0.00094 3.2E-08 69.1 8.9 65 193-257 6-78 (330)
198 1tlt_A Putative oxidoreductase 97.1 0.0013 4.6E-08 67.4 10.0 104 193-301 6-117 (319)
199 3ezy_A Dehydrogenase; structur 97.1 0.0012 4.1E-08 68.6 9.4 64 193-256 3-74 (344)
200 2glx_A 1,5-anhydro-D-fructose 97.1 0.0011 3.6E-08 68.4 8.9 101 194-299 2-112 (332)
201 1id1_A Putative potassium chan 97.1 0.00057 2E-08 62.3 6.1 90 192-283 3-106 (153)
202 2ho3_A Oxidoreductase, GFO/IDH 97.1 0.0011 3.8E-08 68.2 9.0 101 194-299 3-112 (325)
203 2d59_A Hypothetical protein PH 97.1 0.0012 4.1E-08 60.2 8.0 99 192-301 22-125 (144)
204 3e18_A Oxidoreductase; dehydro 97.1 0.0014 4.7E-08 68.7 9.5 64 193-256 6-75 (359)
205 2pc6_A Probable acetolactate s 97.1 0.00066 2.3E-08 63.5 6.0 72 522-593 5-78 (165)
206 1iuk_A Hypothetical protein TT 97.0 0.0013 4.3E-08 59.8 7.4 102 191-301 12-118 (140)
207 3q2i_A Dehydrogenase; rossmann 97.0 0.00068 2.3E-08 70.7 6.2 64 193-256 14-85 (354)
208 1nvt_A Shikimate 5'-dehydrogen 97.0 0.00087 3E-08 68.1 6.7 94 189-285 125-233 (287)
209 3g17_A Similar to 2-dehydropan 97.0 0.00012 4.1E-09 74.6 0.2 92 193-286 3-100 (294)
210 3rc1_A Sugar 3-ketoreductase; 97.0 0.0017 5.7E-08 67.8 8.9 104 192-300 27-140 (350)
211 2v6b_A L-LDH, L-lactate dehydr 97.0 0.0015 5.2E-08 67.0 8.3 110 193-303 1-137 (304)
212 3cea_A MYO-inositol 2-dehydrog 97.0 0.0021 7.3E-08 66.4 9.4 102 193-299 9-121 (346)
213 1zpv_A ACT domain protein; str 96.9 0.00094 3.2E-08 55.4 5.3 62 522-585 6-70 (91)
214 1pg5_A Aspartate carbamoyltran 96.9 0.007 2.4E-07 61.9 12.8 127 136-283 113-261 (299)
215 3fbt_A Chorismate mutase and s 96.9 0.003 1E-07 64.2 10.0 92 188-283 118-215 (282)
216 3jyo_A Quinate/shikimate dehyd 96.9 0.0012 4E-08 67.3 6.8 68 189-256 124-204 (283)
217 3evn_A Oxidoreductase, GFO/IDH 96.9 0.0021 7.1E-08 66.4 8.7 103 193-300 6-118 (329)
218 1pzg_A LDH, lactate dehydrogen 96.9 0.0027 9.3E-08 65.9 9.4 90 193-282 10-132 (331)
219 3bio_A Oxidoreductase, GFO/IDH 96.8 0.0013 4.6E-08 67.4 6.8 100 193-300 10-117 (304)
220 3ec7_A Putative dehydrogenase; 96.8 0.0039 1.3E-07 65.1 9.7 65 192-256 23-97 (357)
221 3l4b_C TRKA K+ channel protien 96.8 0.0017 5.7E-08 62.8 6.3 66 193-258 1-77 (218)
222 3tnl_A Shikimate dehydrogenase 96.7 0.0034 1.2E-07 64.8 8.8 96 188-285 150-266 (315)
223 2a9f_A Putative malic enzyme ( 96.7 0.002 6.8E-08 68.2 7.1 122 138-285 155-292 (398)
224 2fgc_A Acetolactate synthase, 96.7 0.0035 1.2E-07 59.9 8.1 73 521-593 29-103 (193)
225 2i6u_A Otcase, ornithine carba 96.7 0.022 7.4E-07 58.5 14.7 127 135-282 112-265 (307)
226 2ef0_A Ornithine carbamoyltran 96.7 0.014 4.9E-07 59.6 13.2 127 135-282 118-261 (301)
227 1ldn_A L-lactate dehydrogenase 96.7 0.002 7E-08 66.4 7.0 65 193-257 7-85 (316)
228 1j5p_A Aspartate dehydrogenase 96.7 0.002 6.7E-08 64.4 6.5 98 190-300 10-112 (253)
229 1t2d_A LDH-P, L-lactate dehydr 96.7 0.0042 1.4E-07 64.2 9.3 62 193-255 5-81 (322)
230 3c1a_A Putative oxidoreductase 96.7 0.0011 3.9E-08 67.8 4.7 100 193-298 11-118 (315)
231 3l9w_A Glutathione-regulated p 96.7 0.002 6.7E-08 69.1 6.7 90 192-283 4-103 (413)
232 2hjr_A Malate dehydrogenase; m 96.7 0.0043 1.5E-07 64.3 9.1 63 192-255 14-91 (328)
233 3e82_A Putative oxidoreductase 96.7 0.0045 1.6E-07 64.8 9.4 102 193-300 8-118 (364)
234 1f06_A MESO-diaminopimelate D- 96.7 0.0021 7.3E-08 66.3 6.7 100 194-300 5-110 (320)
235 3ohs_X Trans-1,2-dihydrobenzen 96.7 0.0048 1.6E-07 63.7 9.3 64 193-256 3-76 (334)
236 2f06_A Conserved hypothetical 96.6 0.0033 1.1E-07 57.0 7.0 58 522-583 73-130 (144)
237 3mz0_A Inositol 2-dehydrogenas 96.6 0.0024 8.3E-08 66.2 6.9 64 193-256 3-76 (344)
238 4a7p_A UDP-glucose dehydrogena 96.6 0.0043 1.5E-07 67.1 9.1 101 187-292 317-430 (446)
239 1jw9_B Molybdopterin biosynthe 96.6 0.0015 5.2E-08 65.1 5.0 105 171-281 12-152 (249)
240 3dfz_A SIRC, precorrin-2 dehyd 96.6 0.0042 1.4E-07 61.0 7.8 91 187-283 26-122 (223)
241 1h6d_A Precursor form of gluco 96.6 0.0037 1.3E-07 67.2 8.0 64 193-256 84-160 (433)
242 1ydw_A AX110P-like protein; st 96.5 0.0073 2.5E-07 63.0 9.8 104 193-301 7-123 (362)
243 2aef_A Calcium-gated potassium 96.5 0.0026 9E-08 62.1 6.0 86 192-281 9-105 (234)
244 4fgw_A Glycerol-3-phosphate de 96.5 0.0043 1.5E-07 65.9 8.0 89 194-284 36-153 (391)
245 3r7f_A Aspartate carbamoyltran 96.5 0.011 3.7E-07 60.6 10.6 92 189-282 144-250 (304)
246 1lld_A L-lactate dehydrogenase 96.5 0.0053 1.8E-07 62.8 8.3 93 192-285 7-127 (319)
247 1vlv_A Otcase, ornithine carba 96.5 0.021 7.2E-07 59.0 12.7 126 136-282 132-285 (325)
248 1pvv_A Otcase, ornithine carba 96.5 0.025 8.5E-07 58.2 13.2 127 135-282 119-271 (315)
249 3gg2_A Sugar dehydrogenase, UD 96.5 0.0067 2.3E-07 65.7 9.4 95 187-285 313-421 (450)
250 4fcc_A Glutamate dehydrogenase 96.5 0.012 4.2E-07 63.2 11.2 108 187-301 230-367 (450)
251 3q2o_A Phosphoribosylaminoimid 96.4 0.0026 9.1E-08 67.1 5.6 65 188-252 10-81 (389)
252 2p2s_A Putative oxidoreductase 96.4 0.01 3.4E-07 61.3 9.9 102 193-299 5-116 (336)
253 1dxh_A Ornithine carbamoyltran 96.3 0.029 1E-06 58.2 12.7 129 135-283 118-275 (335)
254 3qy9_A DHPR, dihydrodipicolina 96.3 0.0097 3.3E-07 59.1 8.7 80 193-284 4-85 (243)
255 1yqd_A Sinapyl alcohol dehydro 96.3 0.0059 2E-07 63.9 7.3 88 191-283 187-283 (366)
256 1ml4_A Aspartate transcarbamoy 96.3 0.013 4.6E-07 60.1 9.6 94 189-282 152-268 (308)
257 4fb5_A Probable oxidoreductase 96.2 0.006 2.1E-07 63.7 7.0 64 193-256 26-104 (393)
258 3m2t_A Probable dehydrogenase; 96.2 0.0045 1.5E-07 64.8 5.9 63 193-255 6-77 (359)
259 4had_A Probable oxidoreductase 96.2 0.0057 1.9E-07 63.4 6.7 63 194-256 25-96 (350)
260 1duv_G Octase-1, ornithine tra 96.2 0.023 7.7E-07 59.0 11.1 129 136-283 118-275 (333)
261 3csu_A Protein (aspartate carb 96.2 0.026 8.7E-07 58.0 11.3 94 189-282 151-267 (310)
262 2nu8_A Succinyl-COA ligase [AD 96.2 0.0083 2.8E-07 61.0 7.6 104 192-301 7-116 (288)
263 3pqe_A L-LDH, L-lactate dehydr 96.2 0.013 4.4E-07 60.7 9.2 90 192-282 5-122 (326)
264 3t4e_A Quinate/shikimate dehyd 96.2 0.01 3.5E-07 61.2 8.2 70 188-257 144-231 (312)
265 4amu_A Ornithine carbamoyltran 96.2 0.033 1.1E-06 58.4 12.1 93 190-282 178-300 (365)
266 2q3e_A UDP-glucose 6-dehydroge 96.2 0.015 5.2E-07 63.0 10.0 94 189-285 326-445 (467)
267 2dvm_A Malic enzyme, 439AA lon 96.1 0.0084 2.9E-07 64.6 7.7 94 187-283 181-297 (439)
268 4f2g_A Otcase 1, ornithine car 96.1 0.033 1.1E-06 57.1 11.8 127 135-282 118-264 (309)
269 1y6j_A L-lactate dehydrogenase 96.1 0.011 3.9E-07 60.8 8.3 112 193-307 8-152 (318)
270 3p7m_A Malate dehydrogenase; p 96.1 0.021 7.1E-07 59.1 10.2 112 191-305 4-147 (321)
271 3fef_A Putative glucosidase LP 96.1 0.01 3.6E-07 64.1 8.1 112 191-303 4-167 (450)
272 3nep_X Malate dehydrogenase; h 96.1 0.0099 3.4E-07 61.3 7.6 89 193-282 1-118 (314)
273 1oth_A Protein (ornithine tran 96.1 0.05 1.7E-06 56.1 12.8 127 135-282 119-271 (321)
274 3moi_A Probable dehydrogenase; 96.0 0.009 3.1E-07 63.0 7.2 64 193-256 3-74 (387)
275 3kux_A Putative oxidoreductase 96.0 0.0064 2.2E-07 63.2 5.9 65 193-257 8-78 (352)
276 2axq_A Saccharopine dehydrogen 96.0 0.0081 2.8E-07 65.3 6.9 93 185-282 16-119 (467)
277 2vt3_A REX, redox-sensing tran 96.0 0.0033 1.1E-07 61.4 3.3 64 193-256 86-155 (215)
278 1b7g_O Protein (glyceraldehyde 96.0 0.013 4.3E-07 61.2 8.0 84 194-282 3-108 (340)
279 1ur5_A Malate dehydrogenase; o 96.0 0.012 4.1E-07 60.4 7.7 63 193-256 3-80 (309)
280 3i23_A Oxidoreductase, GFO/IDH 96.0 0.0092 3.1E-07 62.0 6.9 63 194-256 4-75 (349)
281 1npy_A Hypothetical shikimate 96.0 0.015 5.1E-07 58.6 8.1 65 191-257 118-186 (271)
282 3grf_A Ornithine carbamoyltran 95.9 0.11 3.8E-06 53.6 14.6 134 135-282 118-283 (328)
283 4a8t_A Putrescine carbamoyltra 95.9 0.12 4E-06 53.7 14.8 130 134-282 135-292 (339)
284 3gdo_A Uncharacterized oxidore 95.9 0.0076 2.6E-07 62.9 6.0 64 193-257 6-76 (358)
285 3two_A Mannitol dehydrogenase; 95.9 0.016 5.6E-07 59.9 8.4 88 191-283 176-266 (348)
286 2i6t_A Ubiquitin-conjugating e 95.9 0.01 3.5E-07 60.9 6.6 111 193-304 15-149 (303)
287 3vku_A L-LDH, L-lactate dehydr 95.8 0.012 4.1E-07 61.0 7.0 93 190-282 7-125 (326)
288 2nvw_A Galactose/lactose metab 95.8 0.017 5.8E-07 63.0 8.4 103 193-300 40-165 (479)
289 4ep1_A Otcase, ornithine carba 95.8 0.091 3.1E-06 54.5 13.4 128 134-282 142-294 (340)
290 2y0c_A BCEC, UDP-glucose dehyd 95.8 0.024 8.3E-07 61.8 9.6 100 187-291 323-446 (478)
291 3f4l_A Putative oxidoreductase 95.8 0.012 4E-07 61.1 6.7 102 193-299 3-115 (345)
292 4gqa_A NAD binding oxidoreduct 95.8 0.0079 2.7E-07 63.9 5.5 63 194-256 28-106 (412)
293 3d0o_A L-LDH 1, L-lactate dehy 95.8 0.017 6E-07 59.4 7.9 110 192-304 6-147 (317)
294 3lk7_A UDP-N-acetylmuramoylala 95.8 0.02 6.8E-07 61.8 8.6 111 189-299 6-137 (451)
295 3g79_A NDP-N-acetyl-D-galactos 95.8 0.014 4.8E-07 63.6 7.4 98 187-292 348-458 (478)
296 3ojo_A CAP5O; rossmann fold, c 95.8 0.024 8.3E-07 60.9 9.2 87 189-285 312-409 (431)
297 1ez4_A Lactate dehydrogenase; 95.7 0.018 6.2E-07 59.4 7.7 109 193-304 6-145 (318)
298 3d6n_B Aspartate carbamoyltran 95.7 0.058 2E-06 54.9 11.2 66 189-256 143-214 (291)
299 3tl2_A Malate dehydrogenase; c 95.7 0.021 7.3E-07 58.8 8.1 92 191-282 7-127 (315)
300 2zqz_A L-LDH, L-lactate dehydr 95.7 0.018 6.2E-07 59.6 7.6 110 192-304 9-149 (326)
301 2w37_A Ornithine carbamoyltran 95.7 0.063 2.1E-06 56.1 11.6 128 135-283 140-296 (359)
302 2cdc_A Glucose dehydrogenase g 95.7 0.0091 3.1E-07 62.4 5.3 91 189-283 178-279 (366)
303 4a8p_A Putrescine carbamoyltra 95.7 0.14 4.8E-06 53.4 14.2 129 135-282 114-270 (355)
304 1piw_A Hypothetical zinc-type 95.6 0.02 6.7E-07 59.7 7.6 90 191-283 179-277 (360)
305 3u3x_A Oxidoreductase; structu 95.6 0.035 1.2E-06 58.0 9.5 64 193-256 27-98 (361)
306 3e8x_A Putative NAD-dependent 95.6 0.023 7.7E-07 55.0 7.6 70 188-257 17-95 (236)
307 3btv_A Galactose/lactose metab 95.6 0.014 4.9E-07 62.7 6.5 104 193-301 21-147 (438)
308 1ff9_A Saccharopine reductase; 95.6 0.018 6.3E-07 62.2 7.4 67 191-257 2-79 (450)
309 3aog_A Glutamate dehydrogenase 95.6 0.076 2.6E-06 57.0 12.0 107 187-301 230-357 (440)
310 3fhl_A Putative oxidoreductase 95.6 0.0088 3E-07 62.5 4.7 63 193-256 6-75 (362)
311 3rui_A Ubiquitin-like modifier 95.5 0.042 1.4E-06 57.1 9.7 90 189-282 31-171 (340)
312 3dty_A Oxidoreductase, GFO/IDH 95.5 0.012 4.1E-07 62.3 5.7 64 193-256 13-95 (398)
313 3k92_A NAD-GDH, NAD-specific g 95.5 0.095 3.2E-06 56.0 12.5 107 187-301 216-342 (424)
314 3do5_A HOM, homoserine dehydro 95.5 0.05 1.7E-06 56.3 10.1 107 194-301 4-135 (327)
315 3gd5_A Otcase, ornithine carba 95.5 0.12 4.1E-06 53.3 12.8 94 189-282 154-273 (323)
316 3orq_A N5-carboxyaminoimidazol 95.5 0.012 4.1E-07 61.9 5.5 63 189-252 9-79 (377)
317 1xyg_A Putative N-acetyl-gamma 95.5 0.031 1E-06 58.7 8.5 100 192-298 16-129 (359)
318 2dt5_A AT-rich DNA-binding pro 95.5 0.0069 2.3E-07 58.9 3.3 63 193-256 81-150 (211)
319 3ew7_A LMO0794 protein; Q8Y8U8 95.5 0.039 1.3E-06 52.2 8.6 66 193-258 1-73 (221)
320 3ldh_A Lactate dehydrogenase; 95.5 0.012 4.1E-07 61.1 5.2 91 191-282 20-138 (330)
321 1oju_A MDH, malate dehydrogena 95.4 0.024 8.2E-07 57.8 7.4 112 193-307 1-147 (294)
322 3tpf_A Otcase, ornithine carba 95.4 0.13 4.5E-06 52.6 12.8 127 135-282 109-262 (307)
323 3gvi_A Malate dehydrogenase; N 95.4 0.035 1.2E-06 57.4 8.7 91 190-282 5-124 (324)
324 4h3v_A Oxidoreductase domain p 95.4 0.01 3.5E-07 61.8 4.7 63 194-256 8-85 (390)
325 2czc_A Glyceraldehyde-3-phosph 95.4 0.024 8.1E-07 58.9 7.3 64 194-257 4-90 (334)
326 1zud_1 Adenylyltransferase THI 95.4 0.014 4.7E-07 58.1 5.4 106 171-282 9-150 (251)
327 2ozp_A N-acetyl-gamma-glutamyl 95.4 0.024 8E-07 59.2 7.3 98 193-296 5-114 (345)
328 1js1_X Transcarbamylase; alpha 95.3 0.18 6.2E-06 51.9 13.5 127 135-282 131-275 (324)
329 1zh8_A Oxidoreductase; TM0312, 95.3 0.019 6.4E-07 59.5 6.3 64 193-256 19-92 (340)
330 3abi_A Putative uncharacterize 95.3 0.019 6.6E-07 60.0 6.4 66 191-257 15-88 (365)
331 2o3j_A UDP-glucose 6-dehydroge 95.3 0.047 1.6E-06 59.5 9.6 101 189-293 332-456 (481)
332 1oi7_A Succinyl-COA synthetase 95.3 0.018 6.1E-07 58.6 5.9 103 192-301 7-116 (288)
333 4ekn_B Aspartate carbamoyltran 95.3 0.12 4.3E-06 52.8 12.1 65 189-253 148-225 (306)
334 3o9z_A Lipopolysaccaride biosy 95.3 0.022 7.4E-07 58.4 6.5 64 193-256 4-82 (312)
335 3tum_A Shikimate dehydrogenase 95.3 0.043 1.5E-06 55.2 8.5 96 187-282 120-225 (269)
336 4gmf_A Yersiniabactin biosynth 95.3 0.016 5.4E-07 61.2 5.5 63 193-256 8-76 (372)
337 3v5n_A Oxidoreductase; structu 95.2 0.019 6.4E-07 61.3 6.0 65 193-257 38-121 (417)
338 1uuf_A YAHK, zinc-type alcohol 95.2 0.03 1E-06 58.7 7.4 88 191-283 194-289 (369)
339 1ys4_A Aspartate-semialdehyde 95.2 0.02 6.7E-07 59.9 6.0 86 193-283 9-115 (354)
340 3oa2_A WBPB; oxidoreductase, s 95.2 0.023 7.8E-07 58.4 6.4 64 193-256 4-83 (318)
341 1cdo_A Alcohol dehydrogenase; 95.2 0.075 2.6E-06 55.5 10.4 87 191-282 192-294 (374)
342 3lou_A Formyltetrahydrofolate 95.2 0.024 8.3E-07 57.7 6.4 54 519-572 8-61 (292)
343 2jhf_A Alcohol dehydrogenase E 95.2 0.073 2.5E-06 55.5 10.3 87 191-282 191-293 (374)
344 2fp4_A Succinyl-COA ligase [GD 95.2 0.022 7.5E-07 58.4 6.0 107 189-301 10-124 (305)
345 3eag_A UDP-N-acetylmuramate:L- 95.1 0.035 1.2E-06 57.2 7.5 108 192-299 4-133 (326)
346 1rjw_A ADH-HT, alcohol dehydro 95.1 0.03 1E-06 57.7 6.9 88 191-283 164-262 (339)
347 3sds_A Ornithine carbamoyltran 95.1 0.22 7.6E-06 51.9 13.4 139 133-282 137-308 (353)
348 3ip1_A Alcohol dehydrogenase, 95.0 0.048 1.7E-06 57.7 8.4 90 190-283 212-319 (404)
349 1e3i_A Alcohol dehydrogenase, 95.0 0.088 3E-06 54.9 10.4 87 191-282 195-297 (376)
350 2d8a_A PH0655, probable L-thre 95.0 0.017 5.8E-07 59.8 4.7 87 191-282 167-267 (348)
351 1hdo_A Biliverdin IX beta redu 95.0 0.036 1.2E-06 51.8 6.6 66 192-257 3-78 (206)
352 1p0f_A NADP-dependent alcohol 95.0 0.08 2.7E-06 55.2 9.9 87 191-282 191-293 (373)
353 2yfq_A Padgh, NAD-GDH, NAD-spe 95.0 0.027 9.3E-07 60.2 6.2 95 187-287 207-327 (421)
354 2tmg_A Protein (glutamate dehy 95.0 0.15 5.1E-06 54.4 11.9 107 187-301 204-332 (415)
355 1lc0_A Biliverdin reductase A; 94.9 0.017 5.8E-07 58.6 4.5 61 193-256 8-75 (294)
356 4ew6_A D-galactose-1-dehydroge 94.9 0.026 9E-07 58.2 5.9 58 193-255 26-90 (330)
357 2ixa_A Alpha-N-acetylgalactosa 94.9 0.035 1.2E-06 59.7 7.0 64 193-256 21-101 (444)
358 1mld_A Malate dehydrogenase; o 94.9 0.06 2E-06 55.3 8.4 96 193-290 1-123 (314)
359 3keo_A Redox-sensing transcrip 94.9 0.012 4.3E-07 57.1 3.1 64 193-256 85-158 (212)
360 1obb_A Maltase, alpha-glucosid 94.9 0.057 1.9E-06 58.8 8.5 113 192-305 3-174 (480)
361 2nqt_A N-acetyl-gamma-glutamyl 94.8 0.03 1E-06 58.6 6.0 95 193-294 10-122 (352)
362 4ej6_A Putative zinc-binding d 94.8 0.047 1.6E-06 57.1 7.6 87 191-282 182-284 (370)
363 3obi_A Formyltetrahydrofolate 94.8 0.019 6.5E-07 58.4 4.3 51 520-570 5-55 (288)
364 1pjq_A CYSG, siroheme synthase 94.8 0.03 1E-06 60.6 6.2 68 187-254 7-80 (457)
365 2fzw_A Alcohol dehydrogenase c 94.8 0.091 3.1E-06 54.7 9.7 87 191-282 190-292 (373)
366 1v9l_A Glutamate dehydrogenase 94.8 0.12 3.9E-06 55.4 10.5 107 187-301 205-338 (421)
367 3ius_A Uncharacterized conserv 94.8 0.032 1.1E-06 55.3 5.9 66 192-257 5-74 (286)
368 3qvo_A NMRA family protein; st 94.8 0.022 7.4E-07 55.3 4.5 67 190-256 21-98 (236)
369 3n0v_A Formyltetrahydrofolate 94.8 0.048 1.6E-06 55.4 7.1 52 520-571 7-58 (286)
370 3upl_A Oxidoreductase; rossman 94.7 0.05 1.7E-06 58.6 7.6 64 193-256 24-117 (446)
371 1zq6_A Otcase, ornithine carba 94.7 0.57 2E-05 48.9 15.3 128 133-282 151-315 (359)
372 3s2e_A Zinc-containing alcohol 94.7 0.028 9.5E-07 57.9 5.4 87 191-282 166-263 (340)
373 1kyq_A Met8P, siroheme biosynt 94.7 0.013 4.4E-07 59.3 2.7 40 187-226 8-47 (274)
374 2bma_A Glutamate dehydrogenase 94.7 0.055 1.9E-06 58.4 7.7 34 187-220 247-280 (470)
375 1pqw_A Polyketide synthase; ro 94.7 0.027 9.1E-07 53.1 4.8 35 191-225 38-73 (198)
376 1nvm_B Acetaldehyde dehydrogen 94.7 0.047 1.6E-06 56.1 6.9 63 193-255 5-80 (312)
377 4h31_A Otcase, ornithine carba 94.7 0.38 1.3E-05 50.3 13.9 131 133-282 141-300 (358)
378 3dhn_A NAD-dependent epimerase 94.6 0.033 1.1E-06 53.2 5.4 64 193-256 5-77 (227)
379 3h2s_A Putative NADH-flavin re 94.6 0.078 2.7E-06 50.4 8.0 64 193-256 1-72 (224)
380 2cf5_A Atccad5, CAD, cinnamyl 94.6 0.046 1.6E-06 56.8 6.8 88 191-283 180-276 (357)
381 3cps_A Glyceraldehyde 3-phosph 94.6 0.073 2.5E-06 55.7 8.2 85 194-283 19-139 (354)
382 1lnq_A MTHK channels, potassiu 94.6 0.03 1E-06 57.7 5.2 85 192-279 115-208 (336)
383 3r6d_A NAD-dependent epimerase 94.5 0.025 8.5E-07 54.1 4.2 64 193-256 6-83 (221)
384 2we8_A Xanthine dehydrogenase; 94.5 0.13 4.3E-06 54.5 10.0 90 192-299 204-296 (386)
385 2xxj_A L-LDH, L-lactate dehydr 94.5 0.055 1.9E-06 55.5 7.0 89 193-282 1-116 (310)
386 1pl8_A Human sorbitol dehydrog 94.5 0.061 2.1E-06 55.8 7.5 88 191-283 171-274 (356)
387 3o1l_A Formyltetrahydrofolate 94.5 0.054 1.8E-06 55.4 6.7 55 517-571 17-72 (302)
388 1iz0_A Quinone oxidoreductase; 94.5 0.043 1.5E-06 55.4 6.1 85 191-282 125-218 (302)
389 3uko_A Alcohol dehydrogenase c 94.5 0.088 3E-06 55.0 8.6 87 191-282 193-295 (378)
390 1cf2_P Protein (glyceraldehyde 94.4 0.046 1.6E-06 56.8 6.3 64 194-257 3-89 (337)
391 3uog_A Alcohol dehydrogenase; 94.4 0.057 2E-06 56.2 7.0 45 191-235 189-234 (363)
392 3vtf_A UDP-glucose 6-dehydroge 94.4 0.078 2.7E-06 57.1 8.0 86 189-284 330-428 (444)
393 1e3j_A NADP(H)-dependent ketos 94.4 0.1 3.6E-06 53.9 8.8 88 191-283 168-272 (352)
394 3e5r_O PP38, glyceraldehyde-3- 94.4 0.063 2.2E-06 55.8 7.1 85 194-283 5-127 (337)
395 2nyi_A Unknown protein; protei 94.3 0.031 1.1E-06 53.3 4.4 51 520-570 92-146 (195)
396 4aj2_A L-lactate dehydrogenase 94.3 0.062 2.1E-06 55.7 6.9 93 189-282 16-136 (331)
397 4e4t_A Phosphoribosylaminoimid 94.3 0.051 1.7E-06 58.1 6.5 64 189-252 32-102 (419)
398 2ejw_A HDH, homoserine dehydro 94.3 0.018 6.2E-07 59.8 2.8 99 194-299 5-116 (332)
399 2d4a_B Malate dehydrogenase; a 94.3 0.064 2.2E-06 54.9 6.9 63 194-257 1-78 (308)
400 1u8f_O GAPDH, glyceraldehyde-3 94.3 0.068 2.3E-06 55.5 7.1 87 193-284 4-124 (335)
401 4gsl_A Ubiquitin-like modifier 94.3 0.085 2.9E-06 58.8 8.2 74 138-224 283-359 (615)
402 2yfk_A Aspartate/ornithine car 94.3 0.19 6.6E-06 53.5 10.7 64 190-253 186-270 (418)
403 3r3j_A Glutamate dehydrogenase 94.2 0.12 4.2E-06 55.5 9.2 36 187-222 234-270 (456)
404 1bgv_A Glutamate dehydrogenase 94.2 0.081 2.8E-06 56.9 7.8 34 187-220 225-258 (449)
405 1f8f_A Benzyl alcohol dehydrog 94.2 0.056 1.9E-06 56.4 6.4 87 191-282 190-289 (371)
406 4eye_A Probable oxidoreductase 94.2 0.059 2E-06 55.6 6.5 86 191-282 159-257 (342)
407 3aoe_E Glutamate dehydrogenase 94.2 0.23 7.8E-06 53.0 11.1 107 187-301 213-336 (419)
408 2hcy_A Alcohol dehydrogenase 1 94.2 0.062 2.1E-06 55.5 6.6 88 191-283 169-270 (347)
409 3tqh_A Quinone oxidoreductase; 94.1 0.041 1.4E-06 56.2 5.2 87 191-283 152-246 (321)
410 3fi9_A Malate dehydrogenase; s 94.1 0.036 1.2E-06 57.8 4.7 66 190-255 6-85 (343)
411 4f3y_A DHPR, dihydrodipicolina 94.1 0.045 1.5E-06 55.2 5.1 87 193-284 8-106 (272)
412 3h9e_O Glyceraldehyde-3-phosph 94.0 0.049 1.7E-06 56.6 5.4 35 193-227 8-43 (346)
413 1u8s_A Glycine cleavage system 94.0 0.05 1.7E-06 51.6 5.1 48 522-571 7-54 (192)
414 2h6e_A ADH-4, D-arabinose 1-de 94.0 0.073 2.5E-06 54.9 6.8 46 191-236 170-218 (344)
415 1u8x_X Maltose-6'-phosphate gl 94.0 0.087 3E-06 57.2 7.5 113 192-304 28-193 (472)
416 3fpc_A NADP-dependent alcohol 93.9 0.052 1.8E-06 56.2 5.5 87 191-282 166-266 (352)
417 1o6z_A MDH, malate dehydrogena 93.9 0.099 3.4E-06 53.3 7.3 109 193-304 1-143 (303)
418 2vn8_A Reticulon-4-interacting 93.8 0.17 5.8E-06 52.8 9.2 90 191-284 183-282 (375)
419 4dup_A Quinone oxidoreductase; 93.8 0.059 2E-06 55.9 5.6 86 191-282 167-265 (353)
420 3vh1_A Ubiquitin-like modifier 93.8 0.12 4E-06 57.6 8.1 91 188-282 323-464 (598)
421 3oqb_A Oxidoreductase; structu 93.7 0.1 3.6E-06 54.5 7.4 102 193-300 7-134 (383)
422 2yyy_A Glyceraldehyde-3-phosph 93.7 0.16 5.6E-06 52.8 8.7 83 194-280 4-111 (343)
423 3nrb_A Formyltetrahydrofolate 93.7 0.071 2.4E-06 54.2 5.7 51 522-572 8-58 (287)
424 3ing_A Homoserine dehydrogenas 93.6 0.12 4E-06 53.5 7.4 107 193-300 5-136 (325)
425 3gms_A Putative NADPH:quinone 93.6 0.064 2.2E-06 55.2 5.4 86 191-282 144-243 (340)
426 3ip3_A Oxidoreductase, putativ 93.6 0.065 2.2E-06 55.2 5.4 62 193-255 3-76 (337)
427 1lu9_A Methylene tetrahydromet 93.5 0.053 1.8E-06 54.6 4.5 37 189-225 116-153 (287)
428 3ff4_A Uncharacterized protein 93.5 0.078 2.7E-06 46.9 5.0 97 193-301 5-106 (122)
429 4b7c_A Probable oxidoreductase 93.5 0.054 1.8E-06 55.6 4.6 87 191-283 149-249 (336)
430 3jv7_A ADH-A; dehydrogenase, n 93.5 0.19 6.5E-06 51.7 8.7 87 191-282 171-270 (345)
431 1v3u_A Leukotriene B4 12- hydr 93.4 0.097 3.3E-06 53.6 6.4 45 191-235 145-191 (333)
432 3goh_A Alcohol dehydrogenase, 93.4 0.07 2.4E-06 54.2 5.3 86 191-282 142-229 (315)
433 4hv4_A UDP-N-acetylmuramate--L 93.4 0.083 2.8E-06 57.7 6.2 108 192-299 22-147 (494)
434 3c8m_A Homoserine dehydrogenas 93.4 0.073 2.5E-06 55.1 5.5 107 193-300 7-140 (331)
435 3fbg_A Putative arginate lyase 93.4 0.099 3.4E-06 54.0 6.4 45 191-235 150-196 (346)
436 1mv8_A GMD, GDP-mannose 6-dehy 93.4 0.096 3.3E-06 56.1 6.5 85 191-281 312-419 (436)
437 1hdg_O Holo-D-glyceraldehyde-3 93.3 0.082 2.8E-06 54.8 5.6 86 193-283 1-123 (332)
438 2c0c_A Zinc binding alcohol de 93.3 0.066 2.3E-06 55.8 5.0 86 191-282 163-261 (362)
439 3qwb_A Probable quinone oxidor 93.3 0.081 2.8E-06 54.2 5.5 45 191-235 148-194 (334)
440 2yv1_A Succinyl-COA ligase [AD 93.1 0.072 2.5E-06 54.3 4.7 102 194-301 15-122 (294)
441 4g65_A TRK system potassium up 93.1 0.078 2.7E-06 57.4 5.2 65 192-256 3-78 (461)
442 1xgk_A Nitrogen metabolite rep 93.1 0.094 3.2E-06 54.4 5.7 95 191-285 4-115 (352)
443 3jyn_A Quinone oxidoreductase; 93.1 0.079 2.7E-06 54.2 5.0 45 191-235 140-186 (325)
444 3mw9_A GDH 1, glutamate dehydr 93.0 0.34 1.2E-05 52.6 10.0 104 189-301 241-365 (501)
445 3q98_A Transcarbamylase; rossm 93.0 0.79 2.7E-05 48.5 12.6 66 189-254 188-274 (399)
446 4ina_A Saccharopine dehydrogen 93.0 0.065 2.2E-06 57.0 4.4 85 193-282 2-107 (405)
447 1vj0_A Alcohol dehydrogenase, 93.0 0.12 4.2E-06 54.1 6.5 45 191-235 195-241 (380)
448 3on5_A BH1974 protein; structu 93.0 0.21 7.1E-06 52.3 8.1 136 193-358 200-344 (362)
449 3nv9_A Malic enzyme; rossmann 93.0 0.65 2.2E-05 49.9 11.9 124 138-285 186-330 (487)
450 3oig_A Enoyl-[acyl-carrier-pro 92.9 0.35 1.2E-05 47.4 9.4 37 189-225 4-43 (266)
451 1vkn_A N-acetyl-gamma-glutamyl 92.9 0.2 6.7E-06 52.3 7.8 94 193-293 14-118 (351)
452 1kol_A Formaldehyde dehydrogen 92.9 0.12 4.2E-06 54.3 6.4 46 191-236 185-232 (398)
453 2dph_A Formaldehyde dismutase; 92.9 0.1 3.4E-06 55.1 5.6 92 191-283 185-300 (398)
454 2ep5_A 350AA long hypothetical 92.8 0.11 3.7E-06 54.2 5.7 85 193-283 5-109 (350)
455 2j3h_A NADP-dependent oxidored 92.8 0.082 2.8E-06 54.3 4.7 35 191-225 155-190 (345)
456 3ijp_A DHPR, dihydrodipicolina 92.8 0.15 5.1E-06 51.8 6.4 87 193-284 22-121 (288)
457 1smk_A Malate dehydrogenase, g 92.8 0.088 3E-06 54.3 4.9 64 193-256 9-86 (326)
458 2b5w_A Glucose dehydrogenase; 92.7 0.17 5.8E-06 52.4 7.1 46 191-236 172-224 (357)
459 1qor_A Quinone oxidoreductase; 92.6 0.12 4E-06 52.8 5.6 35 191-225 140-175 (327)
460 3nkl_A UDP-D-quinovosamine 4-d 92.6 0.1 3.5E-06 46.3 4.5 66 192-257 4-76 (141)
461 1ebf_A Homoserine dehydrogenas 92.6 0.083 2.8E-06 55.4 4.5 30 194-223 6-40 (358)
462 1xq6_A Unknown protein; struct 92.6 0.17 5.8E-06 48.6 6.5 67 190-256 2-79 (253)
463 3hn7_A UDP-N-acetylmuramate-L- 92.6 0.17 5.7E-06 55.7 7.1 110 190-299 17-147 (524)
464 3gqv_A Enoyl reductase; medium 92.6 0.41 1.4E-05 49.9 9.8 88 190-282 163-263 (371)
465 2dq4_A L-threonine 3-dehydroge 92.6 0.064 2.2E-06 55.3 3.6 35 191-225 164-199 (343)
466 1s6y_A 6-phospho-beta-glucosid 92.6 0.24 8.1E-06 53.5 8.1 113 193-305 8-175 (450)
467 2z1m_A GDP-D-mannose dehydrata 92.5 0.21 7.3E-06 50.4 7.3 35 191-225 2-37 (345)
468 3pi7_A NADH oxidoreductase; gr 92.5 0.22 7.5E-06 51.3 7.5 85 192-282 165-263 (349)
469 3gpi_A NAD-dependent epimerase 92.4 0.081 2.8E-06 52.5 4.0 62 191-255 2-72 (286)
470 2nyi_A Unknown protein; protei 92.4 0.21 7.3E-06 47.5 6.7 47 522-570 6-52 (195)
471 1u8s_A Glycine cleavage system 92.4 0.14 4.7E-06 48.5 5.3 37 521-557 93-129 (192)
472 3e48_A Putative nucleoside-dip 92.3 0.11 3.9E-06 51.4 4.9 65 193-257 1-76 (289)
473 2x5o_A UDP-N-acetylmuramoylala 92.3 0.078 2.7E-06 56.9 3.9 109 189-298 2-128 (439)
474 2jhe_A Transcription regulator 92.3 0.29 9.8E-06 44.9 7.3 66 524-594 3-71 (190)
475 3kzn_A Aotcase, N-acetylornith 92.3 2.6 8.7E-05 44.0 15.3 102 133-254 151-273 (359)
476 4id9_A Short-chain dehydrogena 92.3 0.13 4.3E-06 52.5 5.3 65 188-257 15-88 (347)
477 3hhp_A Malate dehydrogenase; M 92.2 0.32 1.1E-05 49.9 8.2 97 193-291 1-125 (312)
478 3cmc_O GAPDH, glyceraldehyde-3 92.2 0.19 6.6E-06 52.0 6.5 86 194-284 3-123 (334)
479 2bka_A CC3, TAT-interacting pr 92.1 0.13 4.4E-06 49.5 4.9 68 190-257 16-95 (242)
480 3h8v_A Ubiquitin-like modifier 92.1 0.14 4.9E-06 52.0 5.4 37 189-225 33-70 (292)
481 3dr3_A N-acetyl-gamma-glutamyl 92.1 0.09 3.1E-06 54.6 3.9 88 193-285 5-109 (337)
482 2eih_A Alcohol dehydrogenase; 92.0 0.18 6.1E-06 51.9 6.1 35 191-225 166-201 (343)
483 2yv2_A Succinyl-COA synthetase 91.9 0.16 5.6E-06 51.7 5.6 102 194-301 15-123 (297)
484 2wm3_A NMRA-like family domain 91.9 0.21 7E-06 49.9 6.3 64 192-255 5-81 (299)
485 1dlj_A UDP-glucose dehydrogena 91.9 0.2 7E-06 53.0 6.5 66 189-255 306-382 (402)
486 2rir_A Dipicolinate synthase, 91.8 0.2 6.8E-06 50.8 6.1 105 190-301 5-120 (300)
487 1qyc_A Phenylcoumaran benzylic 91.8 0.18 6E-06 50.4 5.6 64 192-255 4-86 (308)
488 3h5n_A MCCB protein; ubiquitin 91.8 0.16 5.4E-06 53.1 5.4 36 189-224 115-151 (353)
489 2zcu_A Uncharacterized oxidore 91.7 0.11 3.9E-06 51.1 4.1 62 194-255 1-74 (286)
490 3dqp_A Oxidoreductase YLBE; al 91.7 0.13 4.4E-06 48.9 4.3 65 193-258 1-75 (219)
491 2gas_A Isoflavone reductase; N 91.7 0.16 5.5E-06 50.7 5.2 65 192-256 2-86 (307)
492 2j8z_A Quinone oxidoreductase; 91.7 0.18 6E-06 52.2 5.7 35 191-225 162-197 (354)
493 3m2p_A UDP-N-acetylglucosamine 91.6 0.22 7.5E-06 50.0 6.1 64 192-257 2-73 (311)
494 4a0s_A Octenoyl-COA reductase/ 91.5 0.25 8.5E-06 52.8 6.8 88 190-283 219-337 (447)
495 1jvb_A NAD(H)-dependent alcoho 91.5 0.18 6.1E-06 52.0 5.4 45 191-235 170-217 (347)
496 3pid_A UDP-glucose 6-dehydroge 91.4 0.14 4.9E-06 54.9 4.7 63 191-255 331-404 (432)
497 4dvj_A Putative zinc-dependent 91.3 0.4 1.4E-05 49.8 7.9 45 191-235 171-218 (363)
498 1wly_A CAAR, 2-haloacrylate re 91.3 0.21 7.3E-06 51.0 5.7 35 191-225 145-180 (333)
499 3ruf_A WBGU; rossmann fold, UD 91.2 0.24 8.3E-06 50.4 6.1 68 189-256 22-110 (351)
500 1gad_O D-glyceraldehyde-3-phos 91.2 0.24 8.3E-06 51.2 6.0 31 194-224 3-34 (330)
No 1
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=1.6e-100 Score=852.05 Aligned_cols=525 Identities=37% Similarity=0.540 Sum_probs=489.7
Q ss_pred CCCCeEEEecCCChhHHHHhhcCCcEEecCCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcccccccc
Q 046427 51 TSKPTVLVAEKLGEAGLDVLKNFANVDCSYNLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDNV 130 (595)
Q Consensus 51 ~~~~~il~~~~~~~~~~~~l~~~~~v~~~~~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~i 130 (595)
++++|||+++.+.+...+.|++..++.+....+++++.+.++++|++++++.+++++++++++ |+||||+++|+|||||
T Consensus 2 m~~~~vl~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~-~~Lk~i~~~~~G~d~i 80 (529)
T 1ygy_A 2 VSLPVVLIADKLAPSTVAALGDQVEVRWVDGPDRDKLLAAVPEADALLVRSATTVDAEVLAAA-PKLKIVARAGVGLDNV 80 (529)
T ss_dssp -CCCEEEECSSCCGGGGTTSCSSSEEEECCTTSHHHHHHHGGGCSEEEECSSSCBCHHHHHTC-TTCCEEEESSSCCTTB
T ss_pred CCCcEEEEeCCCCHHHHHHHhcCceEEEcCCCCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhC-CCCcEEEECCcCcCcc
Confidence 456899999999999888888766777766678899999999999999998889999999987 6999999999999999
Q ss_pred ChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHHH
Q 046427 131 DLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVARR 210 (595)
Q Consensus 131 D~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~ 210 (595)
|+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+++|+|.+..+.|.+|+|+|+||||+|+||+++|++
T Consensus 81 d~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~ 160 (529)
T 1ygy_A 81 DVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQR 160 (529)
T ss_dssp CHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999887678899999999999999999999999
Q ss_pred HhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHH
Q 046427 211 AKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEE 290 (595)
Q Consensus 211 l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~ 290 (595)
+++|||+|++||++.+.+.+.+.|+..+++++++++||+|++|+|++++|+++++++.++.||+|++|||++||+++|++
T Consensus 161 l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~ 240 (529)
T 1ygy_A 161 IAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEA 240 (529)
T ss_dssp HHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred HHhCCCEEEEECCCCChhHHHhcCcEEcCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHH
Confidence 99999999999998866667778888779999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccccCCCCC
Q 046427 291 ALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELAATAVNAPMVP 370 (595)
Q Consensus 291 aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn~~~~~ 370 (595)
+|+++|++|+++||++|||+.||+ +++|||+++|+++|||++++|.|++++++..+++++.+|+.|..+.+.||.+.
T Consensus 241 aL~~al~~g~i~ga~lDv~~~eP~-~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~~~~~v~~~~-- 317 (529)
T 1ygy_A 241 ALADAITGGHVRAAGLDVFATEPC-TDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVPDAVNVGG-- 317 (529)
T ss_dssp HHHHHHHTSSEEEEEESSCSSSSC-SCCGGGGCTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCCCTTBCSCCS--
T ss_pred HHHHHHHcCCccEEEEeeccCCCC-CCchHHhCCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcccCCcc--
Confidence 999999999999999999999996 68999999999999999999999999999999999999999999999998764
Q ss_pred hhhhhcccchhHHHHHHHHHHHHHhcCCCCceEEEEEEeecCCCCCcccccchHHHHHhhcccccccccccccHHHHHhh
Q 046427 371 AEVISELAPFVTLAEKLGGLAVQLVAGGSGVKSVKVSYASARGPDDLDTRLLRAMITKGIIEPISSVFVNLVNADFIAKQ 450 (595)
Q Consensus 371 ~~~~~~~~p~~~la~rlG~l~~qL~~g~~~~k~v~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~~nA~~iA~e 450 (595)
++..+.+.||+.||+++|+++.||+++ +|++++++|+|+++ + .+++++++++++|+|+.+.++.+|++||+.+|++
T Consensus 318 ~~~hd~i~P~l~La~~lg~~~~qla~g--~~~ditria~G~~~-~-~~i~~~n~a~l~g~L~~~~~~~~~~vnA~~iA~e 393 (529)
T 1ygy_A 318 GVVNEEVAPWLDLVRKLGVLAGVLSDE--LPVSLSVQVRGELA-A-EEVEVLRLSALRGLFSAVIEDAVTFVNAPALAAE 393 (529)
T ss_dssp TTSCTTTTTHHHHHHHHHHHHHHTSSS--CCSEEEEEEEEGGG-G-SCCHHHHHHHHHHHTGGGSCTTCCCCCHHHHHHH
T ss_pred cccchhhhhHHHHHHHHHHHHHHHhCC--CceEEEEEEEeecc-c-cCCcHHHHHHHHHhcCCCCCCCccccCHHHHHHH
Confidence 556677889999999999999999999 89999999999998 6 6799999999999999998877999999999999
Q ss_pred CCceEEEEEeecCCCCCCCceEEEEEeeeccccccccccCCceEEEEEEEe-C-CeeEEEEEcceEEEeecCccEEEEEe
Q 046427 451 RGLRVTEERIVLDGSPENPLEFIQVQIANVESKFGSAISDIGDIRVEGRVK-D-GKPHLTKVGSFGVDVSLEGSIILCRQ 528 (595)
Q Consensus 451 ~GI~v~f~~~~~~~~hpnt~~~~~~~~~~~~~~~g~sig~~~~~~v~GSvg-G-G~i~I~~Idgf~v~~~~~~~~Liv~~ 528 (595)
+||+++|.+.+....|||+..+...+ +++++++|.|+++ | |+++|++||||++++.|++|+|++.|
T Consensus 394 ~Gi~i~~~~~~~~~~~~n~v~v~~~~------------~~~~~~~v~Gt~~gg~g~~~i~~i~g~~v~~~~~~~~l~v~~ 461 (529)
T 1ygy_A 394 RGVTAEICKASESPNHRSVVDVRAVG------------ADGSVVTVSGTLYGPQLSQKIVQINGRHFDLRAQGINLIIHY 461 (529)
T ss_dssp HSCEEEEEEESCCSSSSEEEEEEEEC------------TTSCEEEEEEEEETTTTEEEEEEETTEEEEEESCSEEEEEEE
T ss_pred cCCEEEEEEccCCCCCCCEEEEEEEE------------CCCCEEEEEEEEeCCCCcEEEEEECCEEEEecCCccEEEEEc
Confidence 99999998877666788876654432 1677899999554 5 69999999999999999999999999
Q ss_pred cCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEEcCCCCcHHHHHHHhcCCCcceEEEEeC
Q 046427 529 VDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIGVDEEPSREVLKKIGETPAIEEFVFLKL 595 (595)
Q Consensus 529 ~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~~d~~~~~e~l~~L~~~~~v~~v~~i~~ 595 (595)
+|+||+|++|+++|++++|||++|+++|.+++++|+|+|++|++++++++++|+++++|.++++++|
T Consensus 462 ~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~~~~~~l~~l~~~~~i~~v~~v~~ 528 (529)
T 1ygy_A 462 VDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDVPDDVRTAIAAAVDAYKLEVVDL 528 (529)
T ss_dssp SCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSCCCHHHHHHHHHHHTEEEEEEEEC
T ss_pred CCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCCCCHHHHHHHhcCCCccEEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999999999999875
No 2
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=1.7e-78 Score=652.26 Aligned_cols=391 Identities=29% Similarity=0.424 Sum_probs=347.4
Q ss_pred CCCeEEEecCCChhHHHHhhcC-C-cEEecC-CCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcccccc
Q 046427 52 SKPTVLVAEKLGEAGLDVLKNF-A-NVDCSY-NLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGID 128 (595)
Q Consensus 52 ~~~~il~~~~~~~~~~~~l~~~-~-~v~~~~-~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d 128 (595)
+++|||+++.+.+...+.|++. . ++.+.. ..+++++.+.++++|++++++.+++++++++++ |+||+|+++|+|+|
T Consensus 3 ~~~kil~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~l~~~~~~~d~l~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d 81 (404)
T 1sc6_A 3 DKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDDEQLKESIRDAHFIGLRSRTHLTEDVINAA-EKLVAIGAFAIGTN 81 (404)
T ss_dssp SSCCEEECSCCCHHHHHHHHHTTCCCEEECSSCCCHHHHHHHTTSCSEEEECSSCCBCHHHHHHC-SSCCEEEECSSCCT
T ss_pred CceEEEEeCCCCHHHHHHHHhCCCcEEEEcCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCcEEEECCcccC
Confidence 3568999999999999999775 3 676543 568899999999999999999889999999987 69999999999999
Q ss_pred ccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHH
Q 046427 129 NVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVA 208 (595)
Q Consensus 129 ~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA 208 (595)
|||+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+++|+|.+..+.+.+|+|||+||||+|+||+.+|
T Consensus 82 ~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA 161 (404)
T 1sc6_A 82 QVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLG 161 (404)
T ss_dssp TBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHH
T ss_pred ccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998766678899999999999999999999
Q ss_pred HHHhcCCCEEEEECCCCcHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchh
Q 046427 209 RRAKGLGMNVIAHDPYAQADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVV 287 (595)
Q Consensus 209 ~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~v 287 (595)
+++++|||+|++||++.... ..++..+ ++++++++||+|++|+|++++|+++|+++.|++||+|++|||+|||+++
T Consensus 162 ~~l~~~G~~V~~~d~~~~~~---~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~v 238 (404)
T 1sc6_A 162 ILAESLGMYVYFYDIENKLP---LGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVV 238 (404)
T ss_dssp HHHHHTTCEEEEECSSCCCC---CTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSB
T ss_pred HHHHHCCCEEEEEcCCchhc---cCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHH
Confidence 99999999999999975321 1134444 8999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcCCeeEEEEecCCCCCCCC----CcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCcc
Q 046427 288 DEEALVRALDSGIISQAALDVFTEEPPAK----DSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELAATA 363 (595)
Q Consensus 288 d~~aL~~aL~~g~i~ga~lDv~~~EP~~~----~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~ 363 (595)
|+++|+++|++|+++||+||||+.||++. ++|||++|||++|||+|++|.|++++++..+++|+.+|++|+.+.+.
T Consensus 239 d~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T~ea~~~~~~~~~~nl~~~l~g~~~~~~ 318 (404)
T 1sc6_A 239 DIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSA 318 (404)
T ss_dssp CHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCSHHHHHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred hHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCcce
Confidence 99999999999999999999999999864 57999999999999999999999999999999999999999999999
Q ss_pred ccCCCCChhhhhcccchhHHHHHHHHHHHHHhcCCCCceEEEEEEeecCCCCCcccccchHHHHHhhccccccccccccc
Q 046427 364 VNAPMVPAEVISELAPFVTLAEKLGGLAVQLVAGGSGVKSVKVSYASARGPDDLDTRLLRAMITKGIIEPISSVFVNLVN 443 (595)
Q Consensus 364 vn~~~~~~~~~~~~~p~~~la~rlG~l~~qL~~g~~~~k~v~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~~n 443 (595)
||.|.++ - +
T Consensus 319 vn~p~~~--------------------------~--~------------------------------------------- 327 (404)
T 1sc6_A 319 VNFPEVS--------------------------L--P------------------------------------------- 327 (404)
T ss_dssp SSSCCCC--------------------------C--C-------------------------------------------
T ss_pred ecccccc--------------------------c--C-------------------------------------------
Confidence 9988755 0 0
Q ss_pred HHHHHhhCCceEEEEEeecCCCCCCCceEEEEEeeeccccccccccCCceEEEEEEEeCCeeEEEEEcceEEEeecCccE
Q 046427 444 ADFIAKQRGLRVTEERIVLDGSPENPLEFIQVQIANVESKFGSAISDIGDIRVEGRVKDGKPHLTKVGSFGVDVSLEGSI 523 (595)
Q Consensus 444 A~~iA~e~GI~v~f~~~~~~~~hpnt~~~~~~~~~~~~~~~g~sig~~~~~~v~GSvgGG~i~I~~Idgf~v~~~~~~~~ 523 (595)
.+ | .+.
T Consensus 328 ---------------------~~-~----------------------------------------------------~~r 333 (404)
T 1sc6_A 328 ---------------------LH-G----------------------------------------------------GRR 333 (404)
T ss_dssp ---------------------CC-S----------------------------------------------------SEE
T ss_pred ---------------------cC-C----------------------------------------------------cce
Confidence 00 0 133
Q ss_pred EEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEEcCCC--CcHHHHHHHhcCCCcceEEEE
Q 046427 524 ILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIGVDEE--PSREVLKKIGETPAIEEFVFL 593 (595)
Q Consensus 524 Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~~d~~--~~~e~l~~L~~~~~v~~v~~i 593 (595)
|++.|+|+||+|++|+++|++++|||+.|+++| +|+.|++++++|++ ++++++++|++++++.+++++
T Consensus 334 l~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r--~g~~A~~vidvD~~~~~~~~~l~~l~~i~~v~~vr~l 403 (404)
T 1sc6_A 334 LMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT--SAQMGYVVIDIEADEDVAEKALQAMKAIPGTIRARLL 403 (404)
T ss_dssp EEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE--CSSEEEEEEEEECCHHHHHHHHHHHHTSTTEEEEEEC
T ss_pred EEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC--CCCEEEEEEEcCCCCCCCHHHHHHHhcCCCeeEEEEe
Confidence 788999999999999999999999999999998 78899999999999 999999999999999999876
No 3
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=1.5e-72 Score=604.47 Aligned_cols=396 Identities=32% Similarity=0.469 Sum_probs=348.7
Q ss_pred cCCCCCCeEEEecCCChhHHHHhhcCC--cEEec-CCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcc
Q 046427 48 TFITSKPTVLVAEKLGEAGLDVLKNFA--NVDCS-YNLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAG 124 (595)
Q Consensus 48 ~~~~~~~~il~~~~~~~~~~~~l~~~~--~v~~~-~~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g 124 (595)
+...+++|||+++.+++...+.|++.+ ++.+. ...+++++.+.++++|++++++.+++++++++++ |+||+|+++|
T Consensus 10 ~~~~~~~kIl~~~~i~~~~~~~l~~~g~~~v~~~~~~~~~~~l~~~~~~~d~l~v~~~~~i~~~~l~~~-p~Lk~I~~~~ 88 (416)
T 3k5p_A 10 SLSRDRINVLLLEGISQTAVEYFKSSGYTNVTHLPKALDKADLIKAISSAHIIGIRSRTQLTEEIFAAA-NRLIAVGCFS 88 (416)
T ss_dssp --CGGGSCEEECSCCCHHHHHHHHHTTCCCEEECSSCCCHHHHHHHHTTCSEEEECSSCCBCHHHHHHC-TTCCEEEECS
T ss_pred CCCCCCcEEEEECCCCHHHHHHHHHCCCcEEEECCCCCCHHHHHHHccCCEEEEEcCCCCCCHHHHHhC-CCcEEEEECc
Confidence 445557899999999999999998753 66653 3468999999999999999999889999999997 6999999999
Q ss_pred ccccccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCChHH
Q 046427 125 VGIDNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVG 204 (595)
Q Consensus 125 ~G~d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG 204 (595)
+|+||||+++|+++||.|+|+|++|+++||||++++||+++|+++.+++.+++|+|.+..+.+.+++|||+||||+|+||
T Consensus 89 ~G~d~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG 168 (416)
T 3k5p_A 89 VGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIG 168 (416)
T ss_dssp SCCTTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHH
T ss_pred cccCccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHH
Confidence 99999999999999999999999999999999999999999999999999999999987667899999999999999999
Q ss_pred HHHHHHHhcCCCEEEEECCCCcHHHHHHcCCc-ccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccC
Q 046427 205 TEVARRAKGLGMNVIAHDPYAQADRARATGVG-LVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 205 ~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~-~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~ar 283 (595)
+.+|+++++|||+|++||++.... ..+.. ..++++++++||+|++|+|++++|+++|+++.|++||+|++|||+||
T Consensus 169 ~~vA~~l~~~G~~V~~yd~~~~~~---~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aR 245 (416)
T 3k5p_A 169 SQVGNLAESLGMTVRYYDTSDKLQ---YGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNAR 245 (416)
T ss_dssp HHHHHHHHHTTCEEEEECTTCCCC---BTTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSC
T ss_pred HHHHHHHHHCCCEEEEECCcchhc---ccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCC
Confidence 999999999999999999875321 11232 34899999999999999999999999999999999999999999999
Q ss_pred CchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCC----cccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 046427 284 GGVVDEEALVRALDSGIISQAALDVFTEEPPAKD----SKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGEL 359 (595)
Q Consensus 284 g~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~----~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~ 359 (595)
|+++|++||+++|++|+++||+||||+.||++.+ +|||++|||++|||+|++|.|++++++..+++|+.+|++++.
T Consensus 246 G~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~nl~~~l~~g~ 325 (416)
T 3k5p_A 246 GSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQERIGTEVTRKLVEYSDVGS 325 (416)
T ss_dssp TTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9999999999999999999999999999998765 799999999999999999999999999999999999999888
Q ss_pred CCccccCCCCChhhhhcccchhHHHHHHHHHHHHHhcCCCCceEEEEEEeecCCCCCcccccchHHHHHhhccccccccc
Q 046427 360 AATAVNAPMVPAEVISELAPFVTLAEKLGGLAVQLVAGGSGVKSVKVSYASARGPDDLDTRLLRAMITKGIIEPISSVFV 439 (595)
Q Consensus 360 ~~~~vn~~~~~~~~~~~~~p~~~la~rlG~l~~qL~~g~~~~k~v~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~v 439 (595)
+.+.||.|.++ | +
T Consensus 326 ~~~~Vn~p~~~------------------------------------------------------------~-~------ 338 (416)
T 3k5p_A 326 TVGAVNFPQVQ------------------------------------------------------------L-P------ 338 (416)
T ss_dssp CTTBSSSCCCC------------------------------------------------------------C-C------
T ss_pred CCceeeCCCcC------------------------------------------------------------C-C------
Confidence 88888864210 0 0
Q ss_pred ccccHHHHHhhCCceEEEEEeecCCCCCCCceEEEEEeeeccccccccccCCceEEEEEEEeCCeeEEEEEcceEEEeec
Q 046427 440 NLVNADFIAKQRGLRVTEERIVLDGSPENPLEFIQVQIANVESKFGSAISDIGDIRVEGRVKDGKPHLTKVGSFGVDVSL 519 (595)
Q Consensus 440 n~~nA~~iA~e~GI~v~f~~~~~~~~hpnt~~~~~~~~~~~~~~~g~sig~~~~~~v~GSvgGG~i~I~~Idgf~v~~~~ 519 (595)
. |++.
T Consensus 339 -------------------~------~~~~-------------------------------------------------- 343 (416)
T 3k5p_A 339 -------------------P------RPTG-------------------------------------------------- 343 (416)
T ss_dssp -------------------C------CSSS--------------------------------------------------
T ss_pred -------------------C------CCCc--------------------------------------------------
Confidence 0 1111
Q ss_pred CccEEEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEEcC--CCCcHHHHHHHhcCCCcceEEEE
Q 046427 520 EGSIILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIGVD--EEPSREVLKKIGETPAIEEFVFL 593 (595)
Q Consensus 520 ~~~~Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~~d--~~~~~e~l~~L~~~~~v~~v~~i 593 (595)
+-+.+.|+++||++++|.++|+++||||.+|.. ..+|+.|..++.+| ++.+++++++|++++++.+++++
T Consensus 344 --~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~--~~~~~~~y~~~d~~~~~~~~~~~~~~l~~~~~~~~~r~~ 415 (416)
T 3k5p_A 344 --TRFMHVHENRPGILNSLMNVFSHHHINIASQFL--QTDGEVGYLVMEADGVGEASDAVLQEIREIPGTIRARLL 415 (416)
T ss_dssp --EEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEE--EECSSCEEEEEEECCCHHHHHHHHHHHHTSTTEEEEEEE
T ss_pred --eEEEEEecCCccHHHHHHHHHHHcCCCHHHHhc--cCCCceEEEEEEecCCCCCcHHHHHHHHhCCCEEEEEEe
Confidence 234577899999999999999999999999987 35678899999999 88889999999999999999986
No 4
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=3.2e-69 Score=568.39 Aligned_cols=314 Identities=23% Similarity=0.437 Sum_probs=290.4
Q ss_pred CCCCCCeEEEecCCChhHHHHhhcCCcEEec---CCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEccc
Q 046427 49 FITSKPTVLVAEKLGEAGLDVLKNFANVDCS---YNLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGV 125 (595)
Q Consensus 49 ~~~~~~~il~~~~~~~~~~~~l~~~~~v~~~---~~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~ 125 (595)
+.+++||||+++.++++.++.|++.+++.+. ...+++++.+.++++|++++++.++++++++++++|+||||+++|+
T Consensus 24 ~~~~~~kvlv~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~l~~~~~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~~~ 103 (345)
T 4g2n_A 24 STHPIQKAFLCRRFTPAIEAELRQRFDLEVNLEDTVLTPSGIASRAHGAEVLFVTATEAITAEVIRKLQPGLKTIATLSV 103 (345)
T ss_dssp ---CCCEEEESSCCCHHHHHHHHHHSEEEECTTCCCCCHHHHHHHTTTCSEEEECTTSCBCHHHHHHTTTTCCEEEESSS
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHccCCEEEecCCCCCCHHHHHHHhcCCeEEEEeCCCCCCHHHHHhhcCCceEEEEcCC
Confidence 3456899999999999999999987787763 2457899999999999999987789999999987569999999999
Q ss_pred cccccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCccccc---ccceeeecCCEEEEEeCCh
Q 046427 126 GIDNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRN---KYVGVSLVGKTLAVMGFGK 202 (595)
Q Consensus 126 G~d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~---~~~g~~l~gktvGIIGlG~ 202 (595)
||||||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+|+|+|.+. .+.|.+|+||||||||+|+
T Consensus 104 G~D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~ 183 (345)
T 4g2n_A 104 GYDHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGR 183 (345)
T ss_dssp CCTTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSH
T ss_pred cccccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeCh
Confidence 9999999999999999999999999999999999999999999999999999999853 2468999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEe
Q 046427 203 VGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVN 280 (595)
Q Consensus 203 IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN 280 (595)
||+.+|+++++|||+|++||++. ..+.+ .|+.++ ++++++++||+|++|+|++++|+++|+++.|+.||+|++|||
T Consensus 184 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN 261 (345)
T 4g2n_A 184 IGRAIATRARGFGLAIHYHNRTRLSHALE--EGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVIN 261 (345)
T ss_dssp HHHHHHHHHHTTTCEEEEECSSCCCHHHH--TTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEE
T ss_pred hHHHHHHHHHHCCCEEEEECCCCcchhhh--cCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEE
Confidence 99999999999999999999986 33322 277776 899999999999999999999999999999999999999999
Q ss_pred ccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 046427 281 VARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELA 360 (595)
Q Consensus 281 ~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~ 360 (595)
+|||+++|++||+++|++|+|+||+||||++|| +.++|||++|||++|||+|++|.|++.+++..+++||.+|++|+.+
T Consensus 262 ~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP-~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~l~g~~~ 340 (345)
T 4g2n_A 262 ISRGDLINDDALIEALRSKHLFAAGLDVFANEP-AIDPRYRSLDNIFLTPHIGSATHETRDAMGWLLIQGIEALNQSDVP 340 (345)
T ss_dssp CSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCchhCHHHHHHHHHhCCceEEEecCCCCCC-CCCchHHhCCCEEEcCccCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999 6899999999999999999999999999999999999999999998
Q ss_pred Ccccc
Q 046427 361 ATAVN 365 (595)
Q Consensus 361 ~~~vn 365 (595)
.+.|+
T Consensus 341 ~~~V~ 345 (345)
T 4g2n_A 341 DNLIS 345 (345)
T ss_dssp TTBCC
T ss_pred CCCcC
Confidence 88764
No 5
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=3.3e-68 Score=558.91 Aligned_cols=315 Identities=29% Similarity=0.465 Sum_probs=297.4
Q ss_pred CCCeEEEecCCChhHHHHhhcCCcEEecC---CCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcccccc
Q 046427 52 SKPTVLVAEKLGEAGLDVLKNFANVDCSY---NLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGID 128 (595)
Q Consensus 52 ~~~~il~~~~~~~~~~~~l~~~~~v~~~~---~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d 128 (595)
|++|||+++.+.++.++.|++.+++.+.. ..+++|+.+.++++|++++++.+++++++++++ |+||||++.|+|||
T Consensus 1 m~~kvlv~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~i~~~~l~~~-~~Lk~I~~~~~G~d 79 (330)
T 4e5n_A 1 MLPKLVITHRVHEEILQLLAPHCELITNQTDSTLTREEILRRCRDAQAMMAFMPDRVDADFLQAC-PELRVIGCALKGFD 79 (330)
T ss_dssp CCCEEEECSCCCHHHHHHHTTTCEEECCCSSSCCCHHHHHHHHTTCSEEEECTTCCBCHHHHHHC-TTCCEEEESSSCCT
T ss_pred CCCEEEEecCCCHHHHHHHHhCCeEEEecCCCCCCHHHHHHHhCCCeEEEEeCCCCCCHHHHhhC-CCCcEEEECCCccc
Confidence 57899999999999999999888877632 357899999999999999987789999999998 69999999999999
Q ss_pred ccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCccccc--ccceeeecCCEEEEEeCChHHHH
Q 046427 129 NVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRN--KYVGVSLVGKTLAVMGFGKVGTE 206 (595)
Q Consensus 129 ~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~--~~~g~~l~gktvGIIGlG~IG~~ 206 (595)
|||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|+|..+ ...|.+|+||||||||+|+||+.
T Consensus 80 ~id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~ 159 (330)
T 4e5n_A 80 NFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLA 159 (330)
T ss_dssp TBCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHH
T ss_pred ccCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999743 34688999999999999999999
Q ss_pred HHHHHhcCCCEEEEECCCC-cHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCc
Q 046427 207 VARRAKGLGMNVIAHDPYA-QADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 207 vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~ 285 (595)
+|+++++|||+|++||++. ..+.+.+.|+...++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+
T Consensus 160 vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~ 239 (330)
T 4e5n_A 160 MADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGS 239 (330)
T ss_dssp HHHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGG
T ss_pred HHHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCc
Confidence 9999999999999999987 556666778887899999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHhcCCeeEEEEecCCCC-------CCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCC
Q 046427 286 VVDEEALVRALDSGIISQAALDVFTEE-------PPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGE 358 (595)
Q Consensus 286 ~vd~~aL~~aL~~g~i~ga~lDv~~~E-------P~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~ 358 (595)
++|+++|+++|++|+|+||+||||++| |++.++|||++||+++|||+|++|.|++.+++..+++|+.+|++|+
T Consensus 240 ~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~ 319 (330)
T 4e5n_A 240 VVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAVRLEIERCAAQNILQALAGE 319 (330)
T ss_dssp GBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred hhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCChHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999 9889999999999999999999999999999999999999999999
Q ss_pred CCCccccCC
Q 046427 359 LAATAVNAP 367 (595)
Q Consensus 359 ~~~~~vn~~ 367 (595)
.+.+.||.|
T Consensus 320 ~~~~~vn~~ 328 (330)
T 4e5n_A 320 RPINAVNRL 328 (330)
T ss_dssp CCTTBSSCC
T ss_pred CCCCccCCC
Confidence 999999976
No 6
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=2e-67 Score=553.63 Aligned_cols=311 Identities=29% Similarity=0.426 Sum_probs=255.4
Q ss_pred CCCCCCeEEEecCCChhHHHHhhcCCcEEecC-CCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEccccc
Q 046427 49 FITSKPTVLVAEKLGEAGLDVLKNFANVDCSY-NLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGI 127 (595)
Q Consensus 49 ~~~~~~~il~~~~~~~~~~~~l~~~~~v~~~~-~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~ 127 (595)
+.+++|+||+++++.++.++.|++.+++...+ ..+++++.+.++++|++++++.+++++++++++ |+||||+++|+||
T Consensus 26 ~~~~~~~vl~~~~~~~~~~~~L~~~~~v~~~~~~~~~~~~~~~~~~~d~li~~~~~~i~~~~l~~~-p~Lk~I~~~g~G~ 104 (340)
T 4dgs_A 26 FRNVKPDLLLVEPMMPFVMDELQRNYSVHRLYQAADRPALEAALPSIRAVATGGGAGLSNEWMEKL-PSLGIIAINGVGT 104 (340)
T ss_dssp -------CEECSCCCHHHHHTHHHHSCCEETTCGGGHHHHHHHGGGCCEEEEETTTCBCHHHHHHC-SSCCEEEEESSCC
T ss_pred cCCCCCEEEEECCCCHHHHHHHhcCCcEEEeCCCCCHHHHHHHhCCcEEEEEcCCCCCCHHHHhhC-CCCEEEEECCCCc
Confidence 44678999999999999999998877776543 246778888889999999988889999999998 6999999999999
Q ss_pred cccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCccccc-c-cceeeecCCEEEEEeCChHHH
Q 046427 128 DNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRN-K-YVGVSLVGKTLAVMGFGKVGT 205 (595)
Q Consensus 128 d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~-~-~~g~~l~gktvGIIGlG~IG~ 205 (595)
||||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+|+|+|.+. . ..|.+|+||||||||+|+||+
T Consensus 105 d~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~ 184 (340)
T 4dgs_A 105 DKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGR 184 (340)
T ss_dssp TTBCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHH
T ss_pred cccCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999875 2 257899999999999999999
Q ss_pred HHHHHHhcCCCEEEEECCCCcHHHHHHcCCc-ccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCC
Q 046427 206 EVARRAKGLGMNVIAHDPYAQADRARATGVG-LVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARG 284 (595)
Q Consensus 206 ~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~-~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg 284 (595)
.+|+++++|||+|++||++... ..++. ..++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||
T Consensus 185 ~vA~~l~~~G~~V~~~dr~~~~----~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG 260 (340)
T 4dgs_A 185 ALASRAEAFGMSVRYWNRSTLS----GVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARG 260 (340)
T ss_dssp HHHHHHHTTTCEEEEECSSCCT----TSCCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC
T ss_pred HHHHHHHHCCCEEEEEcCCccc----ccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence 9999999999999999997643 23343 348999999999999999999999999999999999999999999999
Q ss_pred chhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccc
Q 046427 285 GVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELAATAV 364 (595)
Q Consensus 285 ~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~v 364 (595)
+++|+++|+++|++|+|+||+||||++||++. +|||++|||++|||+|++|.|++.+++..+++||.+|++|+++.+.|
T Consensus 261 ~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~-~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~V 339 (340)
T 4dgs_A 261 NVVDEDALIEALKSGTIAGAGLDVFVNEPAIR-SEFHTTPNTVLMPHQGSATVETRMAMGKLVLANLAAHFAGEKAPNTV 339 (340)
T ss_dssp --------------CCSSEEEESCCSSSSSCC-SHHHHSSSEEECSSCSSCCHHHHHHHHHHHHHHHHHHHTTSCCTTBC
T ss_pred cccCHHHHHHHHHcCCceEEEeCCcCCCCCCc-cchhhCCCEEEcCcCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCc
Confidence 99999999999999999999999999999864 69999999999999999999999999999999999999999999988
Q ss_pred c
Q 046427 365 N 365 (595)
Q Consensus 365 n 365 (595)
|
T Consensus 340 n 340 (340)
T 4dgs_A 340 N 340 (340)
T ss_dssp -
T ss_pred C
Confidence 7
No 7
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=7.3e-67 Score=549.31 Aligned_cols=274 Identities=31% Similarity=0.477 Sum_probs=256.5
Q ss_pred hcCCceEEEEcCCCCCCHHHHhccCCCceEEEEccccccccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchH
Q 046427 90 KISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIA 169 (595)
Q Consensus 90 ~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~ 169 (595)
.++++|++++++.+++++++|+++ |+||+|+++|+|+||||+++|+++||.|+|+||+++.+||||+++++|+++|++.
T Consensus 39 ~l~~ad~i~v~~~~~i~~~~l~~~-p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~ 117 (334)
T 3kb6_A 39 ELKKAELISVFVYDKLTEELLSKM-PRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLK 117 (334)
T ss_dssp HHHHCSEEEECTTSCBCHHHHHTC-TTCCEEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred HhcCCCEEEEeCCCCCCHHHHhcC-CCCcEEEECCcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhccc
Confidence 456899999998899999999998 6999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCccccc-ccceeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccC
Q 046427 170 QADASVKAGKWQRN-KYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTAD 248 (595)
Q Consensus 170 ~~~~~~~~g~W~~~-~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD 248 (595)
.+++.++.|.|.+. ...+.+|+|||+||||+|+||+.+|+++++|||+|++||++.... ..+.++.++++++++++||
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~-~~~~~~~~~~l~ell~~sD 196 (334)
T 3kb6_A 118 RIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRED-LKEKGCVYTSLDELLKESD 196 (334)
T ss_dssp HHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHTTCEECCHHHHHHHCS
T ss_pred cccccccccccccccccccceecCcEEEEECcchHHHHHHHhhcccCceeeecCCccchh-hhhcCceecCHHHHHhhCC
Confidence 99999999998764 356889999999999999999999999999999999999986543 4566788889999999999
Q ss_pred EEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCc----------
Q 046427 249 FISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDS---------- 318 (595)
Q Consensus 249 ~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~---------- 318 (595)
+|++|||+|++|++||+++.|++||+|++|||+|||++||++||++||++|+|+||+||||++||++.++
T Consensus 197 ivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~ 276 (334)
T 3kb6_A 197 VISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDK 276 (334)
T ss_dssp EEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHH
T ss_pred EEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999987665
Q ss_pred -----ccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 046427 319 -----KLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELAATAVN 365 (595)
Q Consensus 319 -----~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn 365 (595)
|||.+|||++|||+||+|.|++.+++..+++||.+|++|+.+...+|
T Consensus 277 ~~~~~~L~~~~nvilTPHia~~T~ea~~~~~~~~~~ni~~~l~Ge~~~~~~n 328 (334)
T 3kb6_A 277 NLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVKGDLEQIKGN 328 (334)
T ss_dssp HHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGGGGGG
T ss_pred cccchhhccCCCEEECCchhhChHHHHHHHHHHHHHHHHHHHcCCCCcCCCC
Confidence 68899999999999999999999999999999999999987654444
No 8
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=6.7e-66 Score=542.03 Aligned_cols=310 Identities=29% Similarity=0.397 Sum_probs=280.5
Q ss_pred eEEEecCCC--hhHHHHhhcCCcEEecCCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEccccccccCh
Q 046427 55 TVLVAEKLG--EAGLDVLKNFANVDCSYNLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDNVDL 132 (595)
Q Consensus 55 ~il~~~~~~--~~~~~~l~~~~~v~~~~~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~iD~ 132 (595)
||++...-. .+.++.+.+..++++......+|+.+.++++|++++++.+++++++++++ |+||||++.|+||||||+
T Consensus 2 ki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~d~li~~~~~~i~~~~l~~~-~~Lk~I~~~~~G~d~id~ 80 (334)
T 2pi1_A 2 NVLFTSVPQEDVPFYQEALKDLSLKIYTTDVSKVPENELKKAELISVFVYDKLTEELLSKM-PRLKLIHTRSVGFDHIDL 80 (334)
T ss_dssp EEEECSCCTTHHHHHHHHTTTSEEEECSSCGGGSCHHHHHHCSEEEECTTSCBCHHHHTTC-TTCCEEEESSSCCTTBCH
T ss_pred EEEEEccChhhHHHHHHHhhcCCEEEECCCCcHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEECCccccccCH
Confidence 677755322 23344444444666543334567888999999999987789999999998 589999999999999999
Q ss_pred hhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCccccc-ccceeeecCCEEEEEeCChHHHHHHHHH
Q 046427 133 SAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRN-KYVGVSLVGKTLAVMGFGKVGTEVARRA 211 (595)
Q Consensus 133 ~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~-~~~g~~l~gktvGIIGlG~IG~~vA~~l 211 (595)
++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|.|.+. ...|.+|+||||||||+|+||+++|+++
T Consensus 81 ~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l 160 (334)
T 2pi1_A 81 DYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYG 160 (334)
T ss_dssp HHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHH
T ss_pred HHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999876 5578999999999999999999999999
Q ss_pred hcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHH
Q 046427 212 KGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEA 291 (595)
Q Consensus 212 ~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~a 291 (595)
++|||+|++||++..... .+.|+..+++++++++||+|++|+|++++|+++|+++.|++||+|++|||+|||+++|+++
T Consensus 161 ~~~G~~V~~~d~~~~~~~-~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~a 239 (334)
T 2pi1_A 161 LAFGMKVLCYDVVKREDL-KEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDA 239 (334)
T ss_dssp HHTTCEEEEECSSCCHHH-HHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHH
T ss_pred HHCcCEEEEECCCcchhh-HhcCceecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHH
Confidence 999999999999875543 2568888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeeEEEEecCCCCCC---------------CCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHc
Q 046427 292 LVRALDSGIISQAALDVFTEEPP---------------AKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALK 356 (595)
Q Consensus 292 L~~aL~~g~i~ga~lDv~~~EP~---------------~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~ 356 (595)
|+++|++|+|+||+||||++||+ ++++|||++|||++|||+|++|.|++.++...+++||.+|++
T Consensus 240 L~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~ 319 (334)
T 2pi1_A 240 LYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVK 319 (334)
T ss_dssp HHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEECCccccChHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999997 578999999999999999999999999999999999999999
Q ss_pred CCCCCccccC
Q 046427 357 GELAATAVNA 366 (595)
Q Consensus 357 g~~~~~~vn~ 366 (595)
|+.+.+.||.
T Consensus 320 g~~~~~~Vn~ 329 (334)
T 2pi1_A 320 GDLEQIKGNF 329 (334)
T ss_dssp TCGGGGGGGE
T ss_pred CCCCCceECc
Confidence 9999999985
No 9
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=4.3e-65 Score=538.93 Aligned_cols=317 Identities=30% Similarity=0.469 Sum_probs=287.1
Q ss_pred CeEEEecCCChh-----HHHHhhcCCcEEecCC--CCHhHHhhhcCCceEEEE-cCCCCCCHHHHhccCCCceEEEEccc
Q 046427 54 PTVLVAEKLGEA-----GLDVLKNFANVDCSYN--LSPEELCTKISLCDALIV-RSGTKVTREVFESSAGRLKVVGRAGV 125 (595)
Q Consensus 54 ~~il~~~~~~~~-----~~~~l~~~~~v~~~~~--~~~~el~~~i~~~d~li~-~~~~~i~~~~l~~~~~~Lk~I~~~g~ 125 (595)
+||++++.+... .++.|++ .++.+... .+++++.+.++++|++++ ++.+++++++++++ |+||+|++.|+
T Consensus 3 mki~~~d~~~~~~~~~~~~~~l~~-~~v~~~~~~~~~~~~l~~~~~~ad~li~~~~~~~~~~~~l~~~-~~Lk~I~~~g~ 80 (352)
T 3gg9_A 3 LKIAVLDDYQDAVRKLDCFSLLQD-HEVKVFNNTVKGVGQLAARVADVEALVLIRERTRVTRQLLDRL-PKLKIISQTGR 80 (352)
T ss_dssp CEEEECCCTTCCGGGSGGGGGGTT-SEEEECCSCCCSHHHHHHHTTTCSEEEECTTSSCBCHHHHTTC-TTCCEEEESSC
T ss_pred eEEEEEcCccccchhhhhhhhhcC-ceEEEecCCCCCHHHHHHHhcCCeEEEEeCCCCCCCHHHHhhC-CCCeEEEEeCc
Confidence 789999887643 2344543 56665433 367899999999999998 66789999999998 69999999999
Q ss_pred cc----cccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccc----------cceeeec
Q 046427 126 GI----DNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNK----------YVGVSLV 191 (595)
Q Consensus 126 G~----d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~----------~~g~~l~ 191 (595)
|+ ||||+++|+++||.|+|+||+ +.+||||++++||+++|+++.+++.+++|+|.+.. ..|.+|+
T Consensus 81 G~~~~~d~id~~~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~ 159 (352)
T 3gg9_A 81 VSRDAGGHIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLK 159 (352)
T ss_dssp CCCSSSCSBCHHHHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCT
T ss_pred ccCCccCcccHHHHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCC
Confidence 99 999999999999999999999 99999999999999999999999999999998642 3578999
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccHHHHh
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFNDEAFF 270 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~ 270 (595)
||||||||+|.||+.+|+++++|||+|++||++...+.+.+.|++.+ ++++++++||+|++|+|++++|+++++++.|+
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~ 239 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLT 239 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHT
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHh
Confidence 99999999999999999999999999999999865555667888877 89999999999999999999999999999999
Q ss_pred cCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHH
Q 046427 271 KMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEA 350 (595)
Q Consensus 271 ~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~ 350 (595)
.||+|++|||+|||+++|+++|+++|++|+|+||+||||++||++.++|||++||+++|||+|++|.|+++++...+++|
T Consensus 240 ~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~n 319 (352)
T 3gg9_A 240 RMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCICTPHIGYVERESYEMYFGIAFQN 319 (352)
T ss_dssp TSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHH
T ss_pred hCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCccccCCCCChhhh
Q 046427 351 VIGALKGELAATAVNAPMVPAEVI 374 (595)
Q Consensus 351 l~~~l~g~~~~~~vn~~~~~~~~~ 374 (595)
|.+|++|.+ .+.||...+.+.+.
T Consensus 320 i~~~~~G~p-~~~Vn~~~~~~~~~ 342 (352)
T 3gg9_A 320 ILDILQGNV-DSVANPTALAPALI 342 (352)
T ss_dssp HHHHHTTCC-TTBSCGGGSSCTTT
T ss_pred HHHHHcCCC-CcccCHHHHHHHHH
Confidence 999999965 68898766555443
No 10
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-64 Score=530.36 Aligned_cols=309 Identities=47% Similarity=0.731 Sum_probs=282.2
Q ss_pred CCCeEEEecCCChhHHHHhhcC-CcEEecCCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcccccccc
Q 046427 52 SKPTVLVAEKLGEAGLDVLKNF-ANVDCSYNLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDNV 130 (595)
Q Consensus 52 ~~~~il~~~~~~~~~~~~l~~~-~~v~~~~~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~i 130 (595)
+++|||+++.+.+...+.|++. .++......+++++.+.++++|++++++.+++++++++++ |+||||++.|+|||||
T Consensus 25 ~~~~vli~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~i 103 (335)
T 2g76_A 25 NLRKVLISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTADVINAA-EKLQVVGRAGTGVDNV 103 (335)
T ss_dssp -CCEEEECSCCCHHHHHHHHHHTCEEEECCSCCHHHHHHHGGGCSEEEECSSSCBCHHHHHHC-SSCCEEEESSSSCTTB
T ss_pred cceEEEEcCCCCHHHHHHHHhCCCEEEECCCCCHHHHHHHhcCceEEEEcCCCCCCHHHHhhC-CCCcEEEECCCCcchh
Confidence 3568999999999888888765 3565555567889999999999999987778999999987 6999999999999999
Q ss_pred ChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHHH
Q 046427 131 DLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVARR 210 (595)
Q Consensus 131 D~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~ 210 (595)
|+++|+++||.|+|+|++++.+||||++++||+++|+++.+++.+++|.|.+..+.+.++.|+||||||+|+||+.+|++
T Consensus 104 d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~ 183 (335)
T 2g76_A 104 DLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATR 183 (335)
T ss_dssp CHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHH
T ss_pred ChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999865567889999999999999999999999
Q ss_pred HhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHH
Q 046427 211 AKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEE 290 (595)
Q Consensus 211 l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~ 290 (595)
+++|||+|++||++.....+.+.|+...++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|++
T Consensus 184 l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~ 263 (335)
T 2g76_A 184 MQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEG 263 (335)
T ss_dssp HHTTTCEEEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred HHHCCCEEEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHH
Confidence 99999999999998765556677887779999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 046427 291 ALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELAAT 362 (595)
Q Consensus 291 aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~ 362 (595)
+|+++|++|+++||+||||+.|| ++++|||++||+++|||++++|.|++.+++..+++|+.+|++|+++.|
T Consensus 264 aL~~aL~~g~i~gA~lDV~~~EP-~~~~~L~~~~nvilTPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~n 334 (335)
T 2g76_A 264 ALLRALQSGQCAGAALDVFTEEP-PRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLTG 334 (335)
T ss_dssp HHHHHHHHTSEEEEEESCCSSSS-CSCCHHHHSTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHhCCccEEEEeecCCCC-CCCchHHhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999 478999999999999999999999999999999999999999987654
No 11
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=8e-65 Score=537.92 Aligned_cols=311 Identities=21% Similarity=0.300 Sum_probs=276.5
Q ss_pred CCCeEEEecCC--------ChhHHHHhhcCCcEEecCCCCHhHHhh-hcCCceEEEEcCCCCCCHHHHhccCCCceEEEE
Q 046427 52 SKPTVLVAEKL--------GEAGLDVLKNFANVDCSYNLSPEELCT-KISLCDALIVRSGTKVTREVFESSAGRLKVVGR 122 (595)
Q Consensus 52 ~~~~il~~~~~--------~~~~~~~l~~~~~v~~~~~~~~~el~~-~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~ 122 (595)
+..++++.+.. .++.++.|++.+++......+.+|+.+ .+.++|+++. .+++++++++++ |+||+|++
T Consensus 26 ~~r~ivll~~~~~~~~~~~~~~~~~~L~~~~~v~~~~~~~~~e~~~~~~~~~~~i~~--~~~i~~~~l~~~-p~Lk~I~~ 102 (365)
T 4hy3_A 26 TERPLAISAPEPRSLDLIFSDEARAALHSKYEIVEADPENIAGLGDDILGRARYIIG--QPPLSAETLARM-PALRSILN 102 (365)
T ss_dssp --CCEEEEECTTSCHHHHCCHHHHHHHHHHSEEEECCGGGGGGSCTTHHHHEEEEEE--CCCCCHHHHTTC-TTCCEEEC
T ss_pred CCCCEEEEcCCcccccccCCHHHHHHHhCCcEEEECCCCChHHHHHHhhCCeEEEEe--CCCCCHHHHhhC-CCCeEEEE
Confidence 34456666655 556788898877876544445566554 3467888774 368999999998 69999997
Q ss_pred c-cccccccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCc--cccc-ccceeeecCCEEEEE
Q 046427 123 A-GVGIDNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGK--WQRN-KYVGVSLVGKTLAVM 198 (595)
Q Consensus 123 ~-g~G~d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~--W~~~-~~~g~~l~gktvGII 198 (595)
. |+||||||+++|+++||.|+|+|++++.+||||++++||+++|+++.+++.+|+|+ |.+. .+.+.+|+|||||||
T Consensus 103 ~~~~G~d~iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGII 182 (365)
T 4hy3_A 103 VESNLLNNMPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIV 182 (365)
T ss_dssp CSSSCCSCSCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEE
T ss_pred ecccccCcccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEe
Confidence 5 89999999999999999999999999999999999999999999999999999999 5432 246889999999999
Q ss_pred eCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEE
Q 046427 199 GFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRI 278 (595)
Q Consensus 199 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gail 278 (595)
|+|+||+.+|+++++|||+|++||++...+.+.+.|+...++++++++||+|++|+|++++|+++|+++.|+.||+|++|
T Consensus 183 GlG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gail 262 (365)
T 4hy3_A 183 GFGDLGKALRRVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAF 262 (365)
T ss_dssp CCSHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEE
T ss_pred cCCcccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEE
Confidence 99999999999999999999999998766666778888889999999999999999999999999999999999999999
Q ss_pred EeccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCC
Q 046427 279 VNVARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGE 358 (595)
Q Consensus 279 iN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~ 358 (595)
||+|||+++|++||+++|++|+|+ |+||||++||++.++|||++|||++|||+|++|.|++.+++..+++||.+|++|+
T Consensus 263 IN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~G~ 341 (365)
T 4hy3_A 263 ILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHRAGALDSAFKKMGDMVLEDMDLMDRGL 341 (365)
T ss_dssp EECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSCSSCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCccccCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccC
Q 046427 359 LAATAVNA 366 (595)
Q Consensus 359 ~~~~~vn~ 366 (595)
++.+++|.
T Consensus 342 ~~~~~vn~ 349 (365)
T 4hy3_A 342 PPMRCKRA 349 (365)
T ss_dssp CCCSSEEC
T ss_pred Cccccccc
Confidence 99999996
No 12
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=1.4e-64 Score=534.42 Aligned_cols=314 Identities=30% Similarity=0.409 Sum_probs=284.7
Q ss_pred CCCeEEEecCCChhHHHHhhcCC-cEEecCC--CCHhHHhhhcCCceEEEEcCC--CCCCHHHHhccCCCceEEEEcccc
Q 046427 52 SKPTVLVAEKLGEAGLDVLKNFA-NVDCSYN--LSPEELCTKISLCDALIVRSG--TKVTREVFESSAGRLKVVGRAGVG 126 (595)
Q Consensus 52 ~~~~il~~~~~~~~~~~~l~~~~-~v~~~~~--~~~~el~~~i~~~d~li~~~~--~~i~~~~l~~~~~~Lk~I~~~g~G 126 (595)
.+|++|-++.......++|++.+ ++.+... .+.+++.+.++++|++|+++. .++++++++++ |+||+|+++|+|
T Consensus 18 ~~~~~lg~~~~~l~~~~~L~~~g~ev~~~~~~~~~~~~~~~~~~~ad~li~~~~~~~~~~~~~l~~~-p~Lk~i~~~g~G 96 (351)
T 3jtm_A 18 KNPNFLGCVENALGIRDWLESQGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKA-KNLKLLLTAGIG 96 (351)
T ss_dssp HCTTCCSSTTTGGGCHHHHHHTTCEEEEESCCSSTTSHHHHHTTTCSEEEECTTSCCCBCHHHHHHC-SSCCEEEESSSC
T ss_pred cCCCEEEeccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHHHhCCCEEEEEccCCCCCCCHHHHhhC-CCCeEEEEeCee
Confidence 46777777776667778888764 6665332 356789999999999998753 46999999998 699999999999
Q ss_pred ccccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccc--cceeeecCCEEEEEeCChHH
Q 046427 127 IDNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNK--YVGVSLVGKTLAVMGFGKVG 204 (595)
Q Consensus 127 ~d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~--~~g~~l~gktvGIIGlG~IG 204 (595)
+||||+++|+++||.|+|+||+|+.+||||++++||+++|++..+++.+++|.|.+.. ..+.+|+||||||||+|+||
T Consensus 97 ~d~id~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG 176 (351)
T 3jtm_A 97 SDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIG 176 (351)
T ss_dssp CTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHH
T ss_pred ecccCHHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHH
Confidence 9999999999999999999999999999999999999999999999999999998642 24789999999999999999
Q ss_pred HHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEecc
Q 046427 205 TEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 205 ~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~a 282 (595)
+.+|+++++|||+|++||++. +.+.+.+.|+..+ ++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|
T Consensus 177 ~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 256 (351)
T 3jtm_A 177 KLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNA 256 (351)
T ss_dssp HHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECS
T ss_pred HHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECc
Confidence 999999999999999999886 5566677888776 89999999999999999999999999999999999999999999
Q ss_pred CCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC--C
Q 046427 283 RGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGEL--A 360 (595)
Q Consensus 283 rg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~--~ 360 (595)
||+++|+++|+++|++|+|+||+||||++||++.++|||++||+++|||+|++|.|++.+++..+++|+.+|++|+. +
T Consensus 257 RG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~nl~~~~~g~~~~~ 336 (351)
T 3jtm_A 257 RGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERYFKGEDFPT 336 (351)
T ss_dssp CGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGSHHHHHHHHHHHHHHHHHHHHTCCCCG
T ss_pred CchhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999995 5
Q ss_pred CccccC
Q 046427 361 ATAVNA 366 (595)
Q Consensus 361 ~~~vn~ 366 (595)
.|.++.
T Consensus 337 ~~~i~~ 342 (351)
T 3jtm_A 337 ENYIVK 342 (351)
T ss_dssp GGEEEE
T ss_pred ceEEec
Confidence 555543
No 13
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=4e-65 Score=532.90 Aligned_cols=310 Identities=22% Similarity=0.278 Sum_probs=278.3
Q ss_pred CCCeEEEecCCChhHHHHh-hcC-CcEEecCCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEccccccc
Q 046427 52 SKPTVLVAEKLGEAGLDVL-KNF-ANVDCSYNLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDN 129 (595)
Q Consensus 52 ~~~~il~~~~~~~~~~~~l-~~~-~~v~~~~~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~ 129 (595)
+++|||+++++.+...+.| ++. .++++....+.+++.+.++++|+++++ .++++++++++ |+||||++.|+||||
T Consensus 4 ~~mkili~~~~~~~~~~~L~~~~~p~~~~~~~~~~~~~~~~~~~ad~li~~--~~~~~~~l~~~-~~Lk~I~~~~~G~d~ 80 (324)
T 3hg7_A 4 SQRTLLLLSQDNAHYERLLKAAHLPHLRILRADNQSDAEKLIGEAHILMAE--PARAKPLLAKA-NKLSWFQSTYAGVDV 80 (324)
T ss_dssp CCEEEEEESTTHHHHHHHHHHSCCTTEEEEECSSHHHHHHHGGGCSEEEEC--HHHHGGGGGGC-TTCCEEEESSSCCGG
T ss_pred cccEEEEecCCCHHHHHHHhhccCCCeEEEeCCChhHHHHHhCCCEEEEEC--CCCCHHHHhhC-CCceEEEECCCCCCc
Confidence 4578999999999999999 554 477766555778888999999999974 35677889887 699999999999999
Q ss_pred cChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHH
Q 046427 130 VDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVAR 209 (595)
Q Consensus 130 iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~ 209 (595)
||++++++ ||.|+|+||+++.+||||++++||+++|+++.+++.+++|+|.+. .+.+|+||||||||+|+||+++|+
T Consensus 81 id~~~~~~-gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~--~~~~l~g~tvGIIGlG~IG~~vA~ 157 (324)
T 3hg7_A 81 LLDARCRR-DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSH--PYQGLKGRTLLILGTGSIGQHIAH 157 (324)
T ss_dssp GSCTTSCC-SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC--CCCCSTTCEEEEECCSHHHHHHHH
T ss_pred cChHHHhC-CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCC--CCcccccceEEEEEECHHHHHHHH
Confidence 99998865 999999999999999999999999999999999999999999863 577999999999999999999999
Q ss_pred HHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcH
Q 046427 210 RAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDE 289 (595)
Q Consensus 210 ~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~ 289 (595)
++++|||+|++||++..............++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+
T Consensus 158 ~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde 237 (324)
T 3hg7_A 158 TGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINE 237 (324)
T ss_dssp HHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCH
T ss_pred HHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCH
Confidence 99999999999998763221111223346899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccccCCCC
Q 046427 290 EALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELAATAVNAPMV 369 (595)
Q Consensus 290 ~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn~~~~ 369 (595)
++|+++|++|+++||+||||++||++.++|||++|||++|||+|++|.+ .+++..+++|+.+|++|+++.+.||.+..
T Consensus 238 ~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~nl~~~~~G~~~~~~V~~~~~ 315 (324)
T 3hg7_A 238 GDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFP--DDVAQIFVRNYIRFIDGQPLDGKIDFDKG 315 (324)
T ss_dssp HHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCCH--HHHHHHHHHHHHHHHTTCCCTTBCCCC--
T ss_pred HHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccHH--HHHHHHHHHHHHHHHcCCCCcceEChhhh
Confidence 9999999999999999999999999999999999999999999999987 46889999999999999999999997643
No 14
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=1.1e-64 Score=533.35 Aligned_cols=312 Identities=22% Similarity=0.316 Sum_probs=272.1
Q ss_pred CeEEEecCCC--hhHHHHh-hcC-CcEEecCCCCHhHHhhhcCCceEEEEcCCCCCCHH-HHhccC-CCceEEEEccccc
Q 046427 54 PTVLVAEKLG--EAGLDVL-KNF-ANVDCSYNLSPEELCTKISLCDALIVRSGTKVTRE-VFESSA-GRLKVVGRAGVGI 127 (595)
Q Consensus 54 ~~il~~~~~~--~~~~~~l-~~~-~~v~~~~~~~~~el~~~i~~~d~li~~~~~~i~~~-~l~~~~-~~Lk~I~~~g~G~ 127 (595)
+||++.+... ...++.+ ++. .++.+......+|+.+.++++|++++++.++++++ ++++++ ++||+|++.|+||
T Consensus 2 mki~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~ 81 (343)
T 2yq5_A 2 TKIAMYNVSPIEVPYIEDWAKKNDVEIKTTDQALTSATVDLAEGCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGLRIVGF 81 (343)
T ss_dssp CEEEEESCCGGGHHHHHHHHHHHTCEEEEESSCCSTTGGGGGTTCSEEEECCSSCBCCHHHHHHHHHTTCCEEEESSSCC
T ss_pred ceEEEEecCcccHHHHHHHHHhCCeEEEECCCCCCHHHHHHhcCCcEEEEcCCCCcCHHHHHHhccccCceEEEECceee
Confidence 6788877322 2233333 232 35655443334678889999999999888899999 999874 3799999999999
Q ss_pred cccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHH-cCcccc-cccceeeecCCEEEEEeCChHHH
Q 046427 128 DNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVK-AGKWQR-NKYVGVSLVGKTLAVMGFGKVGT 205 (595)
Q Consensus 128 d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~-~g~W~~-~~~~g~~l~gktvGIIGlG~IG~ 205 (595)
||||+++|+++||.|+|+|++++.+||||++++||+++|+++.+++.++ +|.|.. ....+.+|+||||||||+|+||+
T Consensus 82 d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~ 161 (343)
T 2yq5_A 82 NTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGS 161 (343)
T ss_dssp TTBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHH
T ss_pred cccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHH
Confidence 9999999999999999999999999999999999999999999999999 998754 34678899999999999999999
Q ss_pred HHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCc
Q 046427 206 EVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 206 ~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~ 285 (595)
.+|+++++|||+|++||++.... .+.++.++++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+
T Consensus 162 ~vA~~l~~~G~~V~~~d~~~~~~--~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~ 239 (343)
T 2yq5_A 162 AVAEIFSAMGAKVIAYDVAYNPE--FEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGE 239 (343)
T ss_dssp HHHHHHHHTTCEEEEECSSCCGG--GTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGG
T ss_pred HHHHHHhhCCCEEEEECCChhhh--hhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCCh
Confidence 99999999999999999987532 2334666799999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHhcCCeeEEEEecCCCCC--CCCC-----------cccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHH
Q 046427 286 VVDEEALVRALDSGIISQAALDVFTEEP--PAKD-----------SKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVI 352 (595)
Q Consensus 286 ~vd~~aL~~aL~~g~i~ga~lDv~~~EP--~~~~-----------~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~ 352 (595)
++|+++|+++|++|+|+||+||||++|| ++.+ +|||++|||++|||+|++|.|++.+++..+++|+.
T Consensus 240 ~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~ni~ 319 (343)
T 2yq5_A 240 LVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFYTETSIRNMVQICLTDQL 319 (343)
T ss_dssp GBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEECSSCTTCBHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEECCccccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 4555 48999999999999999999999999999999999
Q ss_pred HHHcCCCCCccccCC
Q 046427 353 GALKGELAATAVNAP 367 (595)
Q Consensus 353 ~~l~g~~~~~~vn~~ 367 (595)
+|++|+.+.+.||..
T Consensus 320 ~~l~g~~~~~~v~~~ 334 (343)
T 2yq5_A 320 TIAKGGRPRSIVNLT 334 (343)
T ss_dssp HHHTTCCCTTBC---
T ss_pred HHHcCCCCCceECCc
Confidence 999999999999853
No 15
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.8e-63 Score=518.57 Aligned_cols=305 Identities=43% Similarity=0.678 Sum_probs=282.8
Q ss_pred CCCeEEEecCCChhHHHHhhcC-CcEEecCCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcccccccc
Q 046427 52 SKPTVLVAEKLGEAGLDVLKNF-ANVDCSYNLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDNV 130 (595)
Q Consensus 52 ~~~~il~~~~~~~~~~~~l~~~-~~v~~~~~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~i 130 (595)
+++||++++.+.+...+.|++. .++......+++++.+.++++|++++++.+++++++++++ |+||||++.|+|||||
T Consensus 2 ~~~~il~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~i 80 (307)
T 1wwk_A 2 KRMKVLVAAPLHEKAIQVLKDAGLEVIYEEYPDEDRLVELVKDVEAIIVRSKPKVTRRVIESA-PKLKVIARAGVGLDNI 80 (307)
T ss_dssp --CEEEECSCCCHHHHHHHHHTTCEEEECSSCCHHHHHHHSTTCSEEEESSCSCBCHHHHTTC-TTCCEEEESSSCCTTB
T ss_pred CceEEEEeCCCCHHHHHHHHhCCeEEEeCCCCCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhC-CCCeEEEECCcccccc
Confidence 4679999999988888888774 3554444457889999999999999987667999999987 6999999999999999
Q ss_pred ChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHHH
Q 046427 131 DLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVARR 210 (595)
Q Consensus 131 D~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~ 210 (595)
|+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|.|.+..+.+.++.|+||||||+|+||+.+|++
T Consensus 81 d~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~ 160 (307)
T 1wwk_A 81 DVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKI 160 (307)
T ss_dssp CHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999864456889999999999999999999999
Q ss_pred HhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHH
Q 046427 211 AKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEE 290 (595)
Q Consensus 211 l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~ 290 (595)
+++|||+|++||++...+.+.+.|+...++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||+++|++
T Consensus 161 l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~ 240 (307)
T 1wwk_A 161 ANALGMNILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTN 240 (307)
T ss_dssp HHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHH
T ss_pred HHHCCCEEEEECCCCChhhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHH
Confidence 99999999999998865556677887789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcC
Q 046427 291 ALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKG 357 (595)
Q Consensus 291 aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g 357 (595)
+|+++|++|+++||++|||+.||+++++|||++||+++|||++++|.|++.++...+++|+.+|++|
T Consensus 241 aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g 307 (307)
T 1wwk_A 241 ALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQERAGVEVAEKVVKILKG 307 (307)
T ss_dssp HHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999998899999999999999999999999999999999999999976
No 16
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=5.2e-65 Score=532.66 Aligned_cols=310 Identities=25% Similarity=0.354 Sum_probs=271.2
Q ss_pred CCeEEEecCCChhHHHHhhcCC-cEEecCCCCHhHHhhhcCCceEEEEcCCCCCCHHHH-hccCCCceEEEEcccccccc
Q 046427 53 KPTVLVAEKLGEAGLDVLKNFA-NVDCSYNLSPEELCTKISLCDALIVRSGTKVTREVF-ESSAGRLKVVGRAGVGIDNV 130 (595)
Q Consensus 53 ~~~il~~~~~~~~~~~~l~~~~-~v~~~~~~~~~el~~~i~~~d~li~~~~~~i~~~~l-~~~~~~Lk~I~~~g~G~d~i 130 (595)
|+|||++++++++..+.|++.+ ++++.... +...+.+.++|+++++. .++ ++++ +++ |+||||++.|+|||||
T Consensus 1 m~kil~~~~~~~~~~~~L~~~~~~~~~~~~~--~~~~~~~~~ad~l~~~~-~~~-~~~l~~~~-~~Lk~I~~~~~G~d~i 75 (324)
T 3evt_A 1 MSLVLMAQATKPEQLQQLQTTYPDWTFKDAA--AVTAADYDQIEVMYGNH-PLL-KTILARPT-NQLKFVQVISAGVDYL 75 (324)
T ss_dssp -CEEEECSCCCHHHHHHHHHHCTTCEEEETT--SCCTTTGGGEEEEESCC-THH-HHHHHSTT-CCCCEEECSSSCCTTS
T ss_pred CcEEEEecCCCHHHHHHHHhhCCCeEEecCC--ccChHHhCCcEEEEECC-cCh-HHHHHhhC-CCceEEEECCcccccc
Confidence 3689999999999999998753 43332111 11223567899887644 457 8999 565 6999999999999999
Q ss_pred ChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHH-HHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHH
Q 046427 131 DLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQA-DASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVAR 209 (595)
Q Consensus 131 D~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~-~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~ 209 (595)
|+++|+++||.|+|+||+++.+||||++++||+++|+++.+ ++.+++|+|.+.. .+.+|+||||||||+|+||+.+|+
T Consensus 76 d~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~-~~~~l~gktvGIiGlG~IG~~vA~ 154 (324)
T 3evt_A 76 PLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPM-TTSTLTGQQLLIYGTGQIGQSLAA 154 (324)
T ss_dssp CHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSS-CCCCSTTCEEEEECCSHHHHHHHH
T ss_pred CHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCC-CCccccCCeEEEECcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999 9999999998753 588999999999999999999999
Q ss_pred HHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcH
Q 046427 210 RAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDE 289 (595)
Q Consensus 210 ~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~ 289 (595)
++++|||+|++||++..........+...++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+
T Consensus 155 ~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~ 234 (324)
T 3evt_A 155 KASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDT 234 (324)
T ss_dssp HHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCH
T ss_pred HHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhH
Confidence 99999999999998763221111123345899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCC-CCCccccCCC
Q 046427 290 EALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGE-LAATAVNAPM 368 (595)
Q Consensus 290 ~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~-~~~~~vn~~~ 368 (595)
++|+++|++|+++||+||||++||++.++|||++|||++|||+|++|.|++.+++..+++|+.+|++|+ ++.|.||.+.
T Consensus 235 ~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~l~~~~~~~n~V~~~~ 314 (324)
T 3evt_A 235 TALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIAHFRATVFPIFAANFAQFVKDGTLVRNQVDLNR 314 (324)
T ss_dssp HHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCCCHHHHHHHHHHHHHHHHHHHSCCCSCBCC---
T ss_pred HHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChHHHHHHHHHHHHHHHHHHHhCCCCCCceECccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999765 5789998653
No 17
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=2.1e-62 Score=515.86 Aligned_cols=310 Identities=28% Similarity=0.376 Sum_probs=275.2
Q ss_pred CeEEEecC--CChhHHHHhhcCC---cEEecCCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCC--ceEEEEcccc
Q 046427 54 PTVLVAEK--LGEAGLDVLKNFA---NVDCSYNLSPEELCTKISLCDALIVRSGTKVTREVFESSAGR--LKVVGRAGVG 126 (595)
Q Consensus 54 ~~il~~~~--~~~~~~~~l~~~~---~v~~~~~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~--Lk~I~~~g~G 126 (595)
+||++... ..+..++.|++.. ++.+......+++.+.++++|++++++.+++++++++++ |+ ||||++.|+|
T Consensus 2 mkil~~~~~~~~~~~~~~l~~~~p~~~v~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~~~Lk~I~~~~~G 80 (333)
T 1j4a_A 2 TKIFAYAIREDEKPFLKEWEDAHKDVEVEYTDKLLTPETVALAKGADGVVVYQQLDYIAETLQAL-ADNGITKMSLRNVG 80 (333)
T ss_dssp CEEEECSCCGGGHHHHHHHHHTCTTSEEEECSSCCCTTTGGGGTTCSEEEECCSSCBCHHHHHHH-HHTTCCEEEESSSC
T ss_pred cEEEEEecCccCHHHHHHHHhhCCCcEEEECCCCCcHHHHHHhcCCcEEEEcCCCCCCHHHHHhc-cccCCeEEEECCcc
Confidence 47887543 3344566666432 454433333457888899999999987678999999987 46 9999999999
Q ss_pred ccccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCChHHHH
Q 046427 127 IDNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTE 206 (595)
Q Consensus 127 ~d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~ 206 (595)
|||||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|.|.+....+.++.|+||||||+|+||+.
T Consensus 81 ~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~ 160 (333)
T 1j4a_A 81 VDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQV 160 (333)
T ss_dssp CTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHH
T ss_pred cccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999975455788999999999999999999
Q ss_pred HHHHHhcCCCEEEEECCCCcHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCc
Q 046427 207 VARRAKGLGMNVIAHDPYAQADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 207 vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~ 285 (595)
+|+++++|||+|++||++.... +.+ .+..+ ++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+
T Consensus 161 ~A~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~ 238 (333)
T 1j4a_A 161 FMQIMEGFGAKVITYDIFRNPE-LEK-KGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGP 238 (333)
T ss_dssp HHHHHHHTTCEEEEECSSCCHH-HHH-TTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGG
T ss_pred HHHHHHHCCCEEEEECCCcchh-HHh-hCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCc
Confidence 9999999999999999987544 333 35666 89999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHhcCCeeEEEEecCCCCC--CCCCc-----------ccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHH
Q 046427 286 VVDEEALVRALDSGIISQAALDVFTEEP--PAKDS-----------KLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVI 352 (595)
Q Consensus 286 ~vd~~aL~~aL~~g~i~ga~lDv~~~EP--~~~~~-----------~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~ 352 (595)
++|+++|+++|++|+|+||+||||++|| ++.++ |||++|||++|||+|++|.|++.+++..+++|+.
T Consensus 239 ~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~ 318 (333)
T 1j4a_A 239 LVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPKTAFYTTHAVRNMVVKAFDNNL 318 (333)
T ss_dssp GBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEECSSCTTCBHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEECCccccCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 34443 6999999999999999999999999999999999
Q ss_pred HHHcCCCCCccccC
Q 046427 353 GALKGELAATAVNA 366 (595)
Q Consensus 353 ~~l~g~~~~~~vn~ 366 (595)
+|++|+.+.+.||.
T Consensus 319 ~~~~g~~~~~~v~~ 332 (333)
T 1j4a_A 319 ELVEGKEAETPVKV 332 (333)
T ss_dssp HHHTTCCCSSBCCC
T ss_pred HHHcCCCCCccccC
Confidence 99999998888873
No 18
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=2e-61 Score=505.80 Aligned_cols=305 Identities=30% Similarity=0.471 Sum_probs=282.1
Q ss_pred CeEEEecCCChhHHHHhhcCCcEEecC---CCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCC-ceEEEEccccccc
Q 046427 54 PTVLVAEKLGEAGLDVLKNFANVDCSY---NLSPEELCTKISLCDALIVRSGTKVTREVFESSAGR-LKVVGRAGVGIDN 129 (595)
Q Consensus 54 ~~il~~~~~~~~~~~~l~~~~~v~~~~---~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~-Lk~I~~~g~G~d~ 129 (595)
++|++++.+.+...+.|++..++.+.. ..+++++.+.++++|++++++.+++++++++++ |+ ||||++.|+||||
T Consensus 2 ~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~~Lk~I~~~~~G~d~ 80 (320)
T 1gdh_A 2 KKILITWPLPEAAMARARESYDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEVIDRI-PENIKCISTYSIGFDH 80 (320)
T ss_dssp CEEEESSCCCHHHHHHHHTTSEEEECCSTTCCCHHHHHHHHTTCSEEEEETTSCBCHHHHHHS-CTTCCEEEEESSCCTT
T ss_pred cEEEEcCCCCHHHHHHHHhcCCEEEecCCCCCCHHHHHHHhcCCEEEEECCCCCCCHHHHHhC-CccceEEEECCccccc
Confidence 589999999988899998766665532 257789999999999999987678999999998 58 9999999999999
Q ss_pred cChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCccccc---ccceeeecCCEEEEEeCChHHHH
Q 046427 130 VDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRN---KYVGVSLVGKTLAVMGFGKVGTE 206 (595)
Q Consensus 130 iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~---~~~g~~l~gktvGIIGlG~IG~~ 206 (595)
||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|.|... .+.+.++.|+||||||+|+||++
T Consensus 81 id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~ 160 (320)
T 1gdh_A 81 IDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQA 160 (320)
T ss_dssp BCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHH
T ss_pred ccHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHH
Confidence 999999999999999999999999999999999999999999999999999632 24678999999999999999999
Q ss_pred HHHHHhcCCCEEEEECC-CCcHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCC
Q 046427 207 VARRAKGLGMNVIAHDP-YAQADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARG 284 (595)
Q Consensus 207 vA~~l~~~G~~V~~~d~-~~~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg 284 (595)
+|+++++|||+|++||+ +.....+.+.|+..+ ++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||
T Consensus 161 ~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg 240 (320)
T 1gdh_A 161 LAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARG 240 (320)
T ss_dssp HHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred HHHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCC
Confidence 99999999999999999 876555666788777 8999999999999999999999999999999999999999999999
Q ss_pred chhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCC
Q 046427 285 GVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELAA 361 (595)
Q Consensus 285 ~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~ 361 (595)
+++|+++|.++|++|+++||++|||+.|| +.++|||+++|+++|||++++|.|++.+++..+ +|+.+|++|+++.
T Consensus 241 ~~vd~~aL~~aL~~g~i~gA~lDv~~~eP-~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~-~nl~~~~~g~~~~ 315 (320)
T 1gdh_A 241 DLVDNELVVAALEAGRLAYAGFDVFAGEP-NINEGYYDLPNTFLFPHIGSAATQAREDMAHQA-NDLIDALFGGADM 315 (320)
T ss_dssp GGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECSSCTTCBHHHHHHHHHHH-HHHHHHHHTTSCC
T ss_pred cccCHHHHHHHHHhCCCcEEEEeCCCCCC-CCCChhhhCCCEEECCcCCcCcHHHHHHHHHHH-HHHHHHHcCCCCc
Confidence 99999999999999999999999999999 789999999999999999999999999999999 9999999998653
No 19
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.2e-61 Score=505.93 Aligned_cols=303 Identities=36% Similarity=0.521 Sum_probs=281.6
Q ss_pred CeEEEecCCChhHHHHhhcC-CcEEecCCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEccccccccCh
Q 046427 54 PTVLVAEKLGEAGLDVLKNF-ANVDCSYNLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDNVDL 132 (595)
Q Consensus 54 ~~il~~~~~~~~~~~~l~~~-~~v~~~~~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~iD~ 132 (595)
+|||+++.+.+...+.|++. .++.+....+++++.+.++++|++++++.+++++++++++ |+||||++.|+|+||||+
T Consensus 6 mkil~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~ 84 (313)
T 2ekl_A 6 VKALITDPIDEILIKTLREKGIQVDYMPEISKEELLNIIGNYDIIVVRSRTKVTKDVIEKG-KKLKIIARAGIGLDNIDT 84 (313)
T ss_dssp CEEEECSCCCHHHHHHHHHTTCEEEECTTCCHHHHHHHGGGCSEEEECSSSCBCHHHHHHC-TTCCEEEECSSCCTTBCH
T ss_pred eEEEEECCCCHHHHHHHHhCCcEEEeCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEEcCCCCCccCH
Confidence 58999999988888888875 3554434457889999999999999987778999999998 699999999999999999
Q ss_pred hhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHHHHh
Q 046427 133 SAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVARRAK 212 (595)
Q Consensus 133 ~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~ 212 (595)
++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|.|. .+.+.++.|+||||||+|+||+.+|++++
T Consensus 85 ~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~--~~~~~~l~g~~vgIIG~G~IG~~~A~~l~ 162 (313)
T 2ekl_A 85 EEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFK--KIEGLELAGKTIGIVGFGRIGTKVGIIAN 162 (313)
T ss_dssp HHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCC--CCCCCCCTTCEEEEESCSHHHHHHHHHHH
T ss_pred HHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCC--CCCCCCCCCCEEEEEeeCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999996 34678999999999999999999999999
Q ss_pred cCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHH
Q 046427 213 GLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEAL 292 (595)
Q Consensus 213 ~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL 292 (595)
+|||+|++||++.....+.+.|+...++++++++||+|++|+|++++|+++++++.++.||+|++|||++||+++|+++|
T Consensus 163 ~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL 242 (313)
T 2ekl_A 163 AMGMKVLAYDILDIREKAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKAL 242 (313)
T ss_dssp HTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHH
T ss_pred HCCCEEEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHH
Confidence 99999999999876555667788777999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeeEEEEecCCCCCCCCCc---ccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 046427 293 VRALDSGIISQAALDVFTEEPPAKDS---KLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELA 360 (595)
Q Consensus 293 ~~aL~~g~i~ga~lDv~~~EP~~~~~---~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~ 360 (595)
.++|++|+++||+||||+.||++ ++ |||++||+++|||++++|.|++.+++..+++|+.+|++|++.
T Consensus 243 ~~aL~~g~i~ga~lDv~~~eP~~-~~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~~~n~~~~~~g~~l 312 (313)
T 2ekl_A 243 LDYIKKGKVYAYATDVFWNEPPK-EEWELELLKHERVIVTTHIGAQTKEAQKRVAEMTTQNLLNAMKELGM 312 (313)
T ss_dssp HHHHHTTCEEEEEESCCSSSSCC-SHHHHHHHHSTTEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCcEEEEecCCCCCCC-CcccchHhhCCCEEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999986 66 999999999999999999999999999999999999998753
No 20
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.9e-62 Score=516.15 Aligned_cols=310 Identities=25% Similarity=0.379 Sum_probs=273.8
Q ss_pred eEEEec--CCChhHHHHhhcC--CcEEecCCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCC--ceEEEEcccccc
Q 046427 55 TVLVAE--KLGEAGLDVLKNF--ANVDCSYNLSPEELCTKISLCDALIVRSGTKVTREVFESSAGR--LKVVGRAGVGID 128 (595)
Q Consensus 55 ~il~~~--~~~~~~~~~l~~~--~~v~~~~~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~--Lk~I~~~g~G~d 128 (595)
||++.. ......++.|.+. .++.+......+++.+.++++|++++++.+++++++++++ |+ ||||+++|+|||
T Consensus 2 kil~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~~~Lk~I~~~~~G~d 80 (333)
T 1dxy_A 2 KIIAYGARVDEIQYFKQWAKDTGNTLEYHTEFLDENTVEWAKGFDGINSLQTTPYAAGVFEKM-HAYGIKFLTIRNVGTD 80 (333)
T ss_dssp EEEECSCCTTTHHHHHHHHHHHCCEEEECSSCCCTTGGGGGTTCSEEEECCSSCBCHHHHHHH-HHTTCCEEEESSSCCT
T ss_pred EEEEEeccccCHHHHHHHHHhCCeEEEEcCCCChHHHHHHhcCCeEEEEcCCCCCCHHHHHhC-cccCceEEEEcCcccC
Confidence 677754 4445566666432 2455443334467888899999999987778999999987 46 999999999999
Q ss_pred ccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccc-cccceeeecCCEEEEEeCChHHHHH
Q 046427 129 NVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQR-NKYVGVSLVGKTLAVMGFGKVGTEV 207 (595)
Q Consensus 129 ~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~-~~~~g~~l~gktvGIIGlG~IG~~v 207 (595)
|||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|.|.. ....+.++.|+||||||+|+||+.+
T Consensus 81 ~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~ 160 (333)
T 1dxy_A 81 NIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVA 160 (333)
T ss_dssp TBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHH
T ss_pred ccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999964 3456789999999999999999999
Q ss_pred HHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchh
Q 046427 208 ARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVV 287 (595)
Q Consensus 208 A~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~v 287 (595)
|+++++|||+|++||++.... +. ..+.+.++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++
T Consensus 161 A~~l~~~G~~V~~~d~~~~~~-~~-~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~v 238 (333)
T 1dxy_A 161 IKLFKGFGAKVIAYDPYPMKG-DH-PDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLI 238 (333)
T ss_dssp HHHHHHTTCEEEEECSSCCSS-CC-TTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSB
T ss_pred HHHHHHCCCEEEEECCCcchh-hH-hccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCccc
Confidence 999999999999999976432 11 2245668999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcCCeeEEEEecCCCCCC--C--------CC---cccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHH
Q 046427 288 DEEALVRALDSGIISQAALDVFTEEPP--A--------KD---SKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGA 354 (595)
Q Consensus 288 d~~aL~~aL~~g~i~ga~lDv~~~EP~--~--------~~---~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~ 354 (595)
|+++|+++|++|+|+||+||||++||+ + .+ +|||++|||++|||+|++|.|++.+++..+++|+.+|
T Consensus 239 d~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~TPHia~~t~e~~~~~~~~~~~nl~~~ 318 (333)
T 1dxy_A 239 DTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVDF 318 (333)
T ss_dssp CHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEECCccccChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999983 1 12 5899999999999999999999999999999999999
Q ss_pred HcCCCCCccccCC
Q 046427 355 LKGELAATAVNAP 367 (595)
Q Consensus 355 l~g~~~~~~vn~~ 367 (595)
++|+.+.+.||.|
T Consensus 319 ~~g~~~~~~v~~~ 331 (333)
T 1dxy_A 319 LTKGETSTEVTGP 331 (333)
T ss_dssp HHHSCCTTEECC-
T ss_pred HcCCCCCceeCCC
Confidence 9999999999976
No 21
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=2.4e-61 Score=515.95 Aligned_cols=297 Identities=25% Similarity=0.347 Sum_probs=270.4
Q ss_pred HHhhcCC-cEEecCC--CCHhHHhhhcCCceEEEEcC--CCCCCHHHHhccCCCceEEEEccccccccChhhHHhCCceE
Q 046427 68 DVLKNFA-NVDCSYN--LSPEELCTKISLCDALIVRS--GTKVTREVFESSAGRLKVVGRAGVGIDNVDLSAATEHGCLV 142 (595)
Q Consensus 68 ~~l~~~~-~v~~~~~--~~~~el~~~i~~~d~li~~~--~~~i~~~~l~~~~~~Lk~I~~~g~G~d~iD~~aa~~~gI~V 142 (595)
+.|++.+ ++.+.+. .+.+++.+.++++|+++++. .+++++++++++ |+||||++.|+|+||||+++|+++||.|
T Consensus 61 ~~l~~~g~~v~~~~~~~~~~~~l~~~l~~ad~li~~~~~~~~i~~~~l~~~-p~Lk~I~~~g~G~d~iD~~aa~~~gI~V 139 (393)
T 2nac_A 61 KYLESNGHTLVVTSDKDGPDSVFERELVDADVVISQPFWPAYLTPERIAKA-KNLKLALTAGIGSDHVDLQSAIDRNVTV 139 (393)
T ss_dssp HHHHHTTCEEEEESCCSSTTSHHHHHHTTCSEEEEBTTBCCCBCHHHHHHC-TTCCEEEESSSCCTTBCHHHHHHTTCEE
T ss_pred HHHHhCCCEEEEecCCCCCHHHHHHhccCCCEEEEcCccCCCCCHHHHhhC-CCCcEEEEcCccccccCHHHHhcCCEEE
Confidence 4666654 5654322 34568889999999999864 347999999997 6999999999999999999999999999
Q ss_pred EeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccc--cceeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEE
Q 046427 143 VNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNK--YVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIA 220 (595)
Q Consensus 143 ~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~--~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~ 220 (595)
+|+|++++.+||||++++||+++|++..+++.+++|+|.... ..+.+|+||||||||+|+||+.+|+++++|||+|++
T Consensus 140 ~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~ 219 (393)
T 2nac_A 140 AEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHY 219 (393)
T ss_dssp EECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEE
T ss_pred EeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEE
Confidence 999999999999999999999999999999999999997532 246799999999999999999999999999999999
Q ss_pred ECCCC-cHHHHHHcCCcc-cCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhc
Q 046427 221 HDPYA-QADRARATGVGL-VSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDS 298 (595)
Q Consensus 221 ~d~~~-~~~~a~~~g~~~-~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~ 298 (595)
||++. ..+.+.+.|+.. .++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++
T Consensus 220 ~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 299 (393)
T 2nac_A 220 TDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALES 299 (393)
T ss_dssp ECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred EcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHc
Confidence 99986 445566678776 4899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 046427 299 GIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELAATAVN 365 (595)
Q Consensus 299 g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn 365 (595)
|+|+||+||||++||++.++|||++||+++|||+|++|.|++.+++..+++|+.+|++|++..+.++
T Consensus 300 g~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~T~e~~~~~~~~~~~nl~~~~~G~~~~~~~~ 366 (393)
T 2nac_A 300 GRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTAQARYAAGTREILECFFEGRPIRDEYL 366 (393)
T ss_dssp TSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCCGGGE
T ss_pred CCeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcCcHHHHHHHHHHHHHHHHHHHcCCCCcceeE
Confidence 9999999999999999899999999999999999999999999999999999999999998888665
No 22
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=4.2e-62 Score=518.96 Aligned_cols=314 Identities=25% Similarity=0.340 Sum_probs=282.1
Q ss_pred CCCCeEEEecCCChhHHHHhhcCC-cEEecCC--CCHhHHhhhcCCceEEEEcCC--CCCCHHHHhccCCCceEEEEccc
Q 046427 51 TSKPTVLVAEKLGEAGLDVLKNFA-NVDCSYN--LSPEELCTKISLCDALIVRSG--TKVTREVFESSAGRLKVVGRAGV 125 (595)
Q Consensus 51 ~~~~~il~~~~~~~~~~~~l~~~~-~v~~~~~--~~~~el~~~i~~~d~li~~~~--~~i~~~~l~~~~~~Lk~I~~~g~ 125 (595)
..+|+||+.+.......+.|++.+ ++.+... .+.+++.+.++++|+++++.. .++++++++++ |+||||++.|+
T Consensus 15 ~~~~~vl~~d~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~ 93 (364)
T 2j6i_A 15 ADEEKLYGCTENKLGIANWLKDQGHELITTSDKEGGNSVLDQHIPDADIIITTPFHPAYITKERIDKA-KKLKLVVVAGV 93 (364)
T ss_dssp HHCTTCTTBTTTGGGCHHHHHHTTCEEEEESCCSSTTSHHHHHGGGCSEEEECTTSCCCBCHHHHHHC-TTCCEEEESSS
T ss_pred ccCceEEEecCccHHHHHHHHhCCCEEEEcCCCCCCHHHHHHHhhCCeEEEecCcCCCCCCHHHHhhC-CCCeEEEECCc
Confidence 346788888988777778887653 6654332 246789999999999998643 36999999988 59999999999
Q ss_pred cccccChhhHHhC--CceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccc--cceeeecCCEEEEEeCC
Q 046427 126 GIDNVDLSAATEH--GCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNK--YVGVSLVGKTLAVMGFG 201 (595)
Q Consensus 126 G~d~iD~~aa~~~--gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~--~~g~~l~gktvGIIGlG 201 (595)
|+||||+++|+++ ||.|+|+||+++.+||||++++||+++|+++.+++.+++|.|.+.. ..+.+|+|+||||||+|
T Consensus 94 G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG~G 173 (364)
T 2j6i_A 94 GSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIGAG 173 (364)
T ss_dssp CCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCS
T ss_pred ccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEEEEECcC
Confidence 9999999999999 9999999999999999999999999999999999999999997532 25789999999999999
Q ss_pred hHHHHHHHHHhcCCCE-EEEECCCC-cHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEE
Q 046427 202 KVGTEVARRAKGLGMN-VIAHDPYA-QADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRI 278 (595)
Q Consensus 202 ~IG~~vA~~l~~~G~~-V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gail 278 (595)
+||+.+|+++++|||+ |++||++. ..+.+.+.|+..+ ++++++++||+|++|+|++++|+++++++.|+.||+|++|
T Consensus 174 ~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~l 253 (364)
T 2j6i_A 174 RIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWL 253 (364)
T ss_dssp HHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEE
T ss_pred HHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEE
Confidence 9999999999999997 99999876 4555667787665 8999999999999999999999999999999999999999
Q ss_pred EeccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccC--C---cEEEcCCCCCCcHHHHHHHHHHHHHHHHH
Q 046427 279 VNVARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLH--E---NVTVTPHLGASTTEAQEGVAIEIAEAVIG 353 (595)
Q Consensus 279 iN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~--~---nvilTPHi~~~t~ea~~~~~~~~~~~l~~ 353 (595)
||+|||+++|+++|+++|++|+|+||+||||++||++.++|||.+ | ||++|||+|++|.|++.+++..+++|+.+
T Consensus 254 In~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~ 333 (364)
T 2j6i_A 254 VNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYSGTTLDAQTRYAQGTVNILES 333 (364)
T ss_dssp EECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCGGGSHHHHHHHHHHHHHHHHH
T ss_pred EECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccCcCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 9 99999999999999999999999999999
Q ss_pred HHcCCC---CCcccc
Q 046427 354 ALKGEL---AATAVN 365 (595)
Q Consensus 354 ~l~g~~---~~~~vn 365 (595)
|++|+. +.|.|+
T Consensus 334 ~~~g~~~~~~~n~v~ 348 (364)
T 2j6i_A 334 FFTGKFDYRPQDIIL 348 (364)
T ss_dssp HHTTCCCCCGGGEEE
T ss_pred HHcCCCCCCCCceec
Confidence 999984 444444
No 23
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=2.7e-61 Score=502.88 Aligned_cols=304 Identities=36% Similarity=0.531 Sum_probs=279.3
Q ss_pred CeEEEecCCChhHHHHhhcC-CcEEecC--CCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcccccccc
Q 046427 54 PTVLVAEKLGEAGLDVLKNF-ANVDCSY--NLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDNV 130 (595)
Q Consensus 54 ~~il~~~~~~~~~~~~l~~~-~~v~~~~--~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~i 130 (595)
||||+++.+.+...+.|++. .++.+.. ..+.+++.+.++++|++++++.+++++++++++ |+||||++.|+|||||
T Consensus 1 ~~vl~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~i~~~~~G~d~i 79 (311)
T 2cuk_A 1 MRVLVTRTLPGKALDRLRERGLEVEVHRGLFLPKAELLKRVEGAVGLIPTVEDRIDAEVMDRA-KGLKVIACYSVGVDHV 79 (311)
T ss_dssp CEEEESSCCSSSTTHHHHHTTCEEEECCSSCCCHHHHHHHHTTCSEEECCTTSCBCHHHHHHS-TTCCEEECSSSCCTTB
T ss_pred CEEEEeCCCCHHHHHHHHhcCCeEEEecCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEECCcCcccc
Confidence 57899998888888888876 5766532 347889999999999999877678999999987 6999999999999999
Q ss_pred ChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCccccc---ccceeeecCCEEEEEeCChHHHHH
Q 046427 131 DLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRN---KYVGVSLVGKTLAVMGFGKVGTEV 207 (595)
Q Consensus 131 D~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~---~~~g~~l~gktvGIIGlG~IG~~v 207 (595)
|+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|.|.+. .+.+.++.|+||||||+|+||+.+
T Consensus 80 d~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~ 159 (311)
T 2cuk_A 80 DLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAV 159 (311)
T ss_dssp CHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHH
T ss_pred CHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHH
Confidence 99999999999999999999999999999999999999999999999999642 235789999999999999999999
Q ss_pred HHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchh
Q 046427 208 ARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVV 287 (595)
Q Consensus 208 A~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~v 287 (595)
|+++++|||+|++||++..... +...++++++++||+|++|+|++++|+++++++.++.||+|+++||+|||+++
T Consensus 160 A~~l~~~G~~V~~~d~~~~~~~-----~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~v 234 (311)
T 2cuk_A 160 AKRALAFGMRVVYHARTPKPLP-----YPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALV 234 (311)
T ss_dssp HHHHHHTTCEEEEECSSCCSSS-----SCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGB
T ss_pred HHHHHHCCCEEEEECCCCcccc-----cccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCcc
Confidence 9999999999999999764321 34568999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccc
Q 046427 288 DEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELAATAV 364 (595)
Q Consensus 288 d~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~v 364 (595)
|+++|.++|+ |+++||++|||+.||++.++|||+++|+++|||++++|.|++.+++..+++|+.+|++|+.+.+.|
T Consensus 235 d~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v 310 (311)
T 2cuk_A 235 DTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAVENLLAVLEGREPPNPV 310 (311)
T ss_dssp CHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCSSBC
T ss_pred CHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCcc
Confidence 9999999999 999999999999999889999999999999999999999999999999999999999998877655
No 24
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=7.8e-62 Score=511.18 Aligned_cols=308 Identities=24% Similarity=0.330 Sum_probs=273.9
Q ss_pred eEEEec--CCChhHHHHhhcCC--cEEecC-CCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCC--ceEEEEccccc
Q 046427 55 TVLVAE--KLGEAGLDVLKNFA--NVDCSY-NLSPEELCTKISLCDALIVRSGTKVTREVFESSAGR--LKVVGRAGVGI 127 (595)
Q Consensus 55 ~il~~~--~~~~~~~~~l~~~~--~v~~~~-~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~--Lk~I~~~g~G~ 127 (595)
||++++ ...+..++.|.+.. ++.+.. ..+++++.+.++++|++++++.+++++++++++ |+ ||+|++.|+||
T Consensus 2 ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~~~Lk~I~~~~~G~ 80 (331)
T 1xdw_A 2 KVLCYGVRDVELPIFEACNKEFGYDIKCVPDYLNTKETAEMAAGFDAVILRGNCFANKQNLDIY-KKLGVKYILTRTAGT 80 (331)
T ss_dssp EEEECSCCTTTHHHHHHHGGGTCCEEEECSCCSCSHHHHHTTTTCSEEEECTTCCBCHHHHHHH-HHHTCCEEEESSSCC
T ss_pred EEEEEecCccCHHHHHHHHHhcCeEEEECCCCCCHHHHHHHhcCCeEEEEeCCCCCCHHHHhhC-cccCceEEEEccccc
Confidence 688854 45566677775433 444432 235578888999999999987778999999987 47 99999999999
Q ss_pred cccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccc-cccceeeecCCEEEEEeCChHHHH
Q 046427 128 DNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQR-NKYVGVSLVGKTLAVMGFGKVGTE 206 (595)
Q Consensus 128 d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~-~~~~g~~l~gktvGIIGlG~IG~~ 206 (595)
||||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|.|.. ....+.++.|+||||||+|.||+.
T Consensus 81 d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~ 160 (331)
T 1xdw_A 81 DHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVGLGRIGRV 160 (331)
T ss_dssp TTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEEECCSHHHHH
T ss_pred cccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEEECcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999964 345678999999999999999999
Q ss_pred HHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCch
Q 046427 207 VARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGV 286 (595)
Q Consensus 207 vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~ 286 (595)
+|+++++|||+|++||++.... +. ..+...++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||++
T Consensus 161 ~A~~l~~~G~~V~~~d~~~~~~-~~-~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~ 238 (331)
T 1xdw_A 161 AAQIFHGMGATVIGEDVFEIKG-IE-DYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQL 238 (331)
T ss_dssp HHHHHHHTTCEEEEECSSCCCS-CT-TTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGG
T ss_pred HHHHHHHCCCEEEEECCCccHH-HH-hccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCccc
Confidence 9999999999999999976432 12 234566899999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHhcCCeeEEEEecCCCCCC--CCC-------c----ccccC-CcEEEcCCCCCCcHHHHHHHHHHHHHHHH
Q 046427 287 VDEEALVRALDSGIISQAALDVFTEEPP--AKD-------S----KLVLH-ENVTVTPHLGASTTEAQEGVAIEIAEAVI 352 (595)
Q Consensus 287 vd~~aL~~aL~~g~i~ga~lDv~~~EP~--~~~-------~----~L~~~-~nvilTPHi~~~t~ea~~~~~~~~~~~l~ 352 (595)
+|+++|+++|++|+|+||+||||++||+ +.+ + |||++ |||++|||+|++|.|++.+++..+++|+.
T Consensus 239 vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~ 318 (331)
T 1xdw_A 239 VDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVLITPHLGSYTDEAVKNMVEVSYQNLK 318 (331)
T ss_dssp BCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEEECCSCTTCSHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEEEcCccccChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999994 332 3 79999 99999999999999999999999999999
Q ss_pred HHHcCCCCCcccc
Q 046427 353 GALKGELAATAVN 365 (595)
Q Consensus 353 ~~l~g~~~~~~vn 365 (595)
+|++|+.+.+.||
T Consensus 319 ~~~~g~~~~~~v~ 331 (331)
T 1xdw_A 319 DLAETGDCPNKIK 331 (331)
T ss_dssp HHHHHSCCTTBCC
T ss_pred HHHcCCCCCCCCC
Confidence 9999998888776
No 25
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=6.6e-61 Score=504.54 Aligned_cols=313 Identities=32% Similarity=0.508 Sum_probs=289.0
Q ss_pred CCCeEEEecCCChhHHHHhhcCCcEEecCCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEccccccccC
Q 046427 52 SKPTVLVAEKLGEAGLDVLKNFANVDCSYNLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDNVD 131 (595)
Q Consensus 52 ~~~~il~~~~~~~~~~~~l~~~~~v~~~~~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~iD 131 (595)
|++|||+++.+.+..++.|++.+++.+....+.+++.+.++++|++++++.+++++++++++ |+||||++.|+|+||||
T Consensus 1 m~~~il~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id 79 (333)
T 2d0i_A 1 MRPKVGVLLKMKREALEELKKYADVEIILYPSGEELKGVIGRFDGIIVSPTTKITREVLENA-ERLKVISCHSAGYDNID 79 (333)
T ss_dssp CCSEEEECSCCCHHHHHHHHTTSEEEECCSCCHHHHHHHGGGCSEEEECTTSCBCHHHHTTC-TTCCEEEESSSCCTTBC
T ss_pred CCcEEEEECCCCHHHHHHHHhcCCEEEeCCCCHHHHHHHhcCCEEEEECCCCCCCHHHHhhC-CCceEEEECCccccccc
Confidence 46899999999999999998766666543357889999999999999888788999999987 69999999999999999
Q ss_pred hhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCccccc--ccce----eeecCCEEEEEeCChHHH
Q 046427 132 LSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRN--KYVG----VSLVGKTLAVMGFGKVGT 205 (595)
Q Consensus 132 ~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~--~~~g----~~l~gktvGIIGlG~IG~ 205 (595)
+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+|+|.|.+. ...| .+|.|++|||||+|.||+
T Consensus 80 ~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~ 159 (333)
T 2d0i_A 80 LEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILGMGAIGK 159 (333)
T ss_dssp HHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCSTTCEEEEECCSHHHH
T ss_pred HHHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCcccccCCcccCCCCcCEEEEEccCHHHH
Confidence 9999999999999999999999999999999999999999999999999642 1346 799999999999999999
Q ss_pred HHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCc
Q 046427 206 EVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 206 ~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~ 285 (595)
.+|+++++|||+|++||++...+.+.+.|+...++++++++||+|++|+|.+++|+++++++.++.||+| +|||++||.
T Consensus 160 ~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~ 238 (333)
T 2d0i_A 160 AIARRLIPFGVKLYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGA 238 (333)
T ss_dssp HHHHHHGGGTCEEEEECSSCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGG
T ss_pred HHHHHHHHCCCEEEEECCCcchhhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCc
Confidence 9999999999999999998765555566777679999999999999999999999999999899999999 999999999
Q ss_pred hhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCC-cEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccc
Q 046427 286 VVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHE-NVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELAATAV 364 (595)
Q Consensus 286 ~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~-nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~v 364 (595)
++|+++|.++|++|+++|||+|||++||++ ++|||++| ||++|||+++.|.|++.+++..+++|+.+|++|+.+.+.|
T Consensus 239 ~vd~~aL~~aL~~~~i~gaglDv~~~EP~~-~~~L~~~~~nviltPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~~~v 317 (333)
T 2d0i_A 239 LVDEKAVTEAIKQGKLKGYATDVFEKEPVR-EHELFKYEWETVLTPHYAGLALEAQEDVGFRAVENLLKVLRGEVPEDLV 317 (333)
T ss_dssp GBCHHHHHHHHHTTCBCEEEESCCSSSSCS-CCGGGGCTTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHTTCCCTTBS
T ss_pred ccCHHHHHHHHHcCCceEEEecCCCCCCCC-CchHHcCCCCEEEcCccCCCcHHHHHHHHHHHHHHHHHHHcCCCCcCcc
Confidence 999999999999999999999999999987 89999999 9999999999999999999999999999999999999999
Q ss_pred cCC
Q 046427 365 NAP 367 (595)
Q Consensus 365 n~~ 367 (595)
|..
T Consensus 318 ~~~ 320 (333)
T 2d0i_A 318 NKE 320 (333)
T ss_dssp CTT
T ss_pred CHH
Confidence 854
No 26
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=1e-60 Score=505.98 Aligned_cols=319 Identities=25% Similarity=0.349 Sum_probs=287.9
Q ss_pred CCCeEEEecC-C--ChhHHHHhhcCCcEEecCCCCHhHHhhhcC-----CceEEEEcC------CCCCCHHHHhccCCCc
Q 046427 52 SKPTVLVAEK-L--GEAGLDVLKNFANVDCSYNLSPEELCTKIS-----LCDALIVRS------GTKVTREVFESSAGRL 117 (595)
Q Consensus 52 ~~~~il~~~~-~--~~~~~~~l~~~~~v~~~~~~~~~el~~~i~-----~~d~li~~~------~~~i~~~~l~~~~~~L 117 (595)
++||||+++. + .+..++.|++.+++......+++++.+.++ ++|++++++ .+++++++|++++++|
T Consensus 2 ~~~~vl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~L 81 (348)
T 2w2k_A 2 PRPRVLLLGDPARHLDDLWSDFQQKFEVIPANLTTHDGFKQALREKRYGDFEAIIKLAVENGTESYPWNADLISHLPSSL 81 (348)
T ss_dssp CCCEEEECSSCCSSCHHHHHHHHHHSEEEECCCCCHHHHHHHHHTTTTCCCSEEEECSTTTTGGGCCBCHHHHTTSCTTC
T ss_pred CCcEEEEECCccccChHHHHHHHhcceEEecCCCCHHHHHHHhhhcccCCeEEEEEcccccccccCCCCHHHHHhcccCc
Confidence 4689999988 5 356777887766776555567899998887 899988742 3589999999884469
Q ss_pred eEEEEccccccccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCc---ccccc----cceeee
Q 046427 118 KVVGRAGVGIDNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGK---WQRNK----YVGVSL 190 (595)
Q Consensus 118 k~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~---W~~~~----~~g~~l 190 (595)
|||+++|+||||||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|+ |.+.. ..|.+|
T Consensus 82 k~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~l 161 (348)
T 2w2k_A 82 KVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIGKSAHNP 161 (348)
T ss_dssp CEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTTCCCS
T ss_pred eEEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCcccccccccccccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999 94321 357899
Q ss_pred cCCEEEEEeCChHHHHHHHHHh-cCCCEEEEECCCC-cHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccHH
Q 046427 191 VGKTLAVMGFGKVGTEVARRAK-GLGMNVIAHDPYA-QADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFNDE 267 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~-~~G~~V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~~ 267 (595)
+|++|||||+|+||+.+|++++ +|||+|++||++. ..+.+.+.|+..+ ++++++++||+|++|+|++++|+++++++
T Consensus 162 ~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~ 241 (348)
T 2w2k_A 162 RGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEA 241 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHH
T ss_pred CCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHH
Confidence 9999999999999999999999 9999999999986 4444556687776 89999999999999999999999999999
Q ss_pred HHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHH
Q 046427 268 AFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEI 347 (595)
Q Consensus 268 ~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~ 347 (595)
.++.||+|++|||++||+++|+++|.++|++|+++||++|||+.|| +.++|||.+|||++|||+++.|.|++.+++..+
T Consensus 242 ~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP-~~~~~L~~~~nviltPH~~~~t~e~~~~~~~~~ 320 (348)
T 2w2k_A 242 FFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEP-QVSKELIEMKHVTLTTHIGGVAIETFHEFERLT 320 (348)
T ss_dssp HHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTT-SCCHHHHTSSSEEECCSCTTCSHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCC-CCCchhhcCCCEEEcCcCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998 578899999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCccccCCCCCh
Q 046427 348 AEAVIGALKGELAATAVNAPMVPA 371 (595)
Q Consensus 348 ~~~l~~~l~g~~~~~~vn~~~~~~ 371 (595)
++|+.+|++|+.+.+.||.+.+++
T Consensus 321 ~~ni~~~~~g~~~~~~v~~~~~~~ 344 (348)
T 2w2k_A 321 MTNIDRFLLQGKPLLTPAGKVFAP 344 (348)
T ss_dssp HHHHHHHHHTCCCCSSBCSCCCCC
T ss_pred HHHHHHHHcCCCCcceecccccCc
Confidence 999999999999999999887654
No 27
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=1.2e-60 Score=501.87 Aligned_cols=309 Identities=27% Similarity=0.381 Sum_probs=280.5
Q ss_pred CCCCeEEEecCCChhHHHHhhcCCcEEecC-CCCHhH-HhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcccccc
Q 046427 51 TSKPTVLVAEKLGEAGLDVLKNFANVDCSY-NLSPEE-LCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGID 128 (595)
Q Consensus 51 ~~~~~il~~~~~~~~~~~~l~~~~~v~~~~-~~~~~e-l~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d 128 (595)
|++++||+++.+.+..++.|++.+++.... ..+.++ +.+.++++|++++++.+++++++++++ |+||||+++|+|||
T Consensus 21 m~~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-p~Lk~I~~~~~G~d 99 (333)
T 3ba1_A 21 MEAIGVLMMCPMSTYLEQELDKRFKLFRYWTQPAQRDFLALQAESIRAVVGNSNAGADAELIDAL-PKLEIVSSFSVGLD 99 (333)
T ss_dssp -CCCEEEECSCCCHHHHHHHHHHSEEEEGGGCSSHHHHHHHHTTTEEEEEECSSSCBCHHHHHHC-TTCCEEEESSSCCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHhcCCEEEecCCCChHHHHHHHhCCCEEEEEcCCCCCCHHHHhhC-CCCcEEEEcCcccc
Confidence 346899999999999999888766665432 234444 666789999999987778999999987 69999999999999
Q ss_pred ccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccc-cceeeecCCEEEEEeCChHHHHH
Q 046427 129 NVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNK-YVGVSLVGKTLAVMGFGKVGTEV 207 (595)
Q Consensus 129 ~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~-~~g~~l~gktvGIIGlG~IG~~v 207 (595)
|||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+|+|.|.+.. ..|.+++||+|||||+|+||+.+
T Consensus 100 ~id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~v 179 (333)
T 3ba1_A 100 KVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAV 179 (333)
T ss_dssp TBCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHH
T ss_pred ccCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999997533 35789999999999999999999
Q ss_pred HHHHhcCCCEEEEECCCCcHHHHHHcCCc-ccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCch
Q 046427 208 ARRAKGLGMNVIAHDPYAQADRARATGVG-LVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGV 286 (595)
Q Consensus 208 A~~l~~~G~~V~~~d~~~~~~~a~~~g~~-~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~ 286 (595)
|+++++|||+|++||++.... .|+. ..++++++++||+|++|+|++++|+++++++.++.||+|++|||++||.+
T Consensus 180 A~~l~~~G~~V~~~dr~~~~~----~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~ 255 (333)
T 3ba1_A 180 AERAEAFDCPISYFSRSKKPN----TNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPH 255 (333)
T ss_dssp HHHHHTTTCCEEEECSSCCTT----CCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGG
T ss_pred HHHHHHCCCEEEEECCCchhc----cCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCch
Confidence 999999999999999876422 2554 35899999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 046427 287 VDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELAATAVN 365 (595)
Q Consensus 287 vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn 365 (595)
+|+++|.++|++|+++||++|||+.||++. +|||++|||++|||+|+.|.|++.+++..+++|+.+|++|+++.+.||
T Consensus 256 vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~-~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~Vn 333 (333)
T 3ba1_A 256 VDEPELVSALVEGRLGGAGLDVFEREPEVP-EKLFGLENVVLLPHVGSGTVETRKVMADLVVGNLEAHFSGKPLLTPVV 333 (333)
T ss_dssp BCHHHHHHHHHHTSSCEEEESCCTTTTCCC-GGGGGCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCSSBCC
T ss_pred hCHHHHHHHHHcCCCeEEEEecCCCCCCCc-chhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999999999999999865 999999999999999999999999999999999999999998888776
No 28
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=3.7e-60 Score=500.59 Aligned_cols=310 Identities=30% Similarity=0.453 Sum_probs=276.2
Q ss_pred CCCCeEEEecCCC-hhHHHHhhcCCcEEecCCCCHhHHhhhc-CCceEEEEcCCCCCCHHHHhccCCCceEEEEcccccc
Q 046427 51 TSKPTVLVAEKLG-EAGLDVLKNFANVDCSYNLSPEELCTKI-SLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGID 128 (595)
Q Consensus 51 ~~~~~il~~~~~~-~~~~~~l~~~~~v~~~~~~~~~el~~~i-~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d 128 (595)
+.+|+|++.+... ...++.++...++......+.+|+.+.+ .++|+++++..+++++++++++ |+||+|++.|+|||
T Consensus 19 ~~kp~i~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d 97 (347)
T 1mx3_A 19 SHMPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGALMYHTITLTREDLEKF-KALRIIVRIGSGFD 97 (347)
T ss_dssp --CCEEEESSCSCCTTTHHHHTTTCEEEECCCSSGGGSCHHHHHHEEEEEECSSSCBCHHHHTTC-SSCCEEEESSSCCT
T ss_pred CCCCEEEEEcCCcchhhHHHhhccceEEecCCCCHHHHHHHhhcCCeEEEEeCCCCCCHHHHhhC-CCCCEEEEcccccC
Confidence 4478888877422 2236777776677665556677777765 7889988877778999999998 69999999999999
Q ss_pred ccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccc------cce-eeecCCEEEEEeCC
Q 046427 129 NVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNK------YVG-VSLVGKTLAVMGFG 201 (595)
Q Consensus 129 ~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~------~~g-~~l~gktvGIIGlG 201 (595)
|||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|.|.... ..| .+++|+||||||+|
T Consensus 98 ~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G 177 (347)
T 1mx3_A 98 NIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLG 177 (347)
T ss_dssp TBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCS
T ss_pred cccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeEC
Confidence 99999999999999999999999999999999999999999999999999996421 113 68999999999999
Q ss_pred hHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEe
Q 046427 202 KVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVN 280 (595)
Q Consensus 202 ~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN 280 (595)
+||+.+|+++++|||+|++||++.....+...|+..+ ++++++++||+|++|+|++++|+++|+++.|+.||+|++|||
T Consensus 178 ~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN 257 (347)
T 1mx3_A 178 RVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVN 257 (347)
T ss_dssp HHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEE
Confidence 9999999999999999999999875444566777654 899999999999999999999999999999999999999999
Q ss_pred ccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCC-CCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 046427 281 VARGGVVDEEALVRALDSGIISQAALDVFTEEPPA-KDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGEL 359 (595)
Q Consensus 281 ~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~-~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~ 359 (595)
++||+++|+++|+++|++|+|+||++|||+.||++ .++|||.+||+++|||++++|.+++.++...+++|+.+|++|+.
T Consensus 258 ~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~t~~~~~~~~~~~~~ni~~~~~g~~ 337 (347)
T 1mx3_A 258 TARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGRI 337 (347)
T ss_dssp CSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999986 47899999999999999999999999999999999999999987
Q ss_pred CC
Q 046427 360 AA 361 (595)
Q Consensus 360 ~~ 361 (595)
+.
T Consensus 338 ~~ 339 (347)
T 1mx3_A 338 PD 339 (347)
T ss_dssp TT
T ss_pred Cc
Confidence 65
No 29
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=9e-60 Score=496.26 Aligned_cols=312 Identities=35% Similarity=0.599 Sum_probs=287.8
Q ss_pred CCCeEEEecCCChhHHHHhhcCCcEEecCC---CCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcccccc
Q 046427 52 SKPTVLVAEKLGEAGLDVLKNFANVDCSYN---LSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGID 128 (595)
Q Consensus 52 ~~~~il~~~~~~~~~~~~l~~~~~v~~~~~---~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d 128 (595)
|++|||+++.+.+...+.|++.+++.+... .+.+++.+.++++|++++++.+++++++++++ |+||||++.|+|||
T Consensus 1 m~~~il~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d 79 (334)
T 2dbq_A 1 MKPKVFITREIPEVGIKMLEDEFEVEVWGDEKEIPREILLKKVKEVDALVTMLSERIDKEVFENA-PKLRIVANYAVGYD 79 (334)
T ss_dssp CCCEEEESSCCCHHHHHHHHTTSEEEECCCSSCCCHHHHHHHTTSCSEEEECTTSCBCHHHHHTC-TTCCEEEESSSCCT
T ss_pred CCcEEEEecCCCHHHHHHHHhcCCEEEecCCCCCCHHHHHHHhcCcEEEEEcCCCCCCHHHHhhC-CCceEEEECCcccc
Confidence 357899999998888888887667665332 46889999999999999987778999999987 69999999999999
Q ss_pred ccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCccc----c---cccceeeecCCEEEEEeCC
Q 046427 129 NVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQ----R---NKYVGVSLVGKTLAVMGFG 201 (595)
Q Consensus 129 ~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~----~---~~~~g~~l~gktvGIIGlG 201 (595)
|||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|.|. + ..+.|.++.|++|||||+|
T Consensus 80 ~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G 159 (334)
T 2dbq_A 80 NIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLG 159 (334)
T ss_dssp TBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCS
T ss_pred cccHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccC
Confidence 99999999999999999999999999999999999999999999999999996 2 1234789999999999999
Q ss_pred hHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEec
Q 046427 202 KVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNV 281 (595)
Q Consensus 202 ~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~ 281 (595)
.||+.+|++++++||+|++||++...+.+.+.|+...++++++++||+|++|+|.+++|+++++++.+..||+|++|||+
T Consensus 160 ~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~ 239 (334)
T 2dbq_A 160 RIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINI 239 (334)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEEC
T ss_pred HHHHHHHHHHHhCCCEEEEECCCcchhhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEEC
Confidence 99999999999999999999998755545566777779999999999999999999999999999999999999999999
Q ss_pred cCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCC
Q 046427 282 ARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELAA 361 (595)
Q Consensus 282 arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~ 361 (595)
+||.++|+++|.++|++|+++||++|||++|| ++++|||.++||++|||+|+.|.+++.+++..+++|+.+|++|+.+.
T Consensus 240 srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP-~~~~~L~~~~~vi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~ 318 (334)
T 2dbq_A 240 ARGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEIPP 318 (334)
T ss_dssp SCGGGBCHHHHHHHHHHTSSSEEEESCCSSSS-CCCHHHHHCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHTTCCCT
T ss_pred CCCcccCHHHHHHHHHhCCeeEEEecCCCCCC-CCCchhhcCCCEEECCccCCCcHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 99999999999999999999999999999999 78899999999999999999999999999999999999999999999
Q ss_pred cccc
Q 046427 362 TAVN 365 (595)
Q Consensus 362 ~~vn 365 (595)
+.||
T Consensus 319 ~~v~ 322 (334)
T 2dbq_A 319 TLVN 322 (334)
T ss_dssp TBSC
T ss_pred cccC
Confidence 9888
No 30
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=2.7e-59 Score=491.89 Aligned_cols=315 Identities=27% Similarity=0.438 Sum_probs=288.1
Q ss_pred CCCCeEEEecCCChhHHHHhhcC--CcEEecC---CCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEccc
Q 046427 51 TSKPTVLVAEKLGEAGLDVLKNF--ANVDCSY---NLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGV 125 (595)
Q Consensus 51 ~~~~~il~~~~~~~~~~~~l~~~--~~v~~~~---~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~ 125 (595)
.++++||+++.+.+...+.|++. .++.... ..+++++.+.++++|++++++.++++++++++++|+||||++.|+
T Consensus 6 ~~~~~il~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~Lk~I~~~~~ 85 (330)
T 2gcg_A 6 VRLMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSV 85 (330)
T ss_dssp -CCEEEEESSCCCHHHHHHHHHCTTEEEEECCSSSCCCHHHHHHHHTTCSEEEECTTSCBCHHHHHHHCTTCCEEEESSS
T ss_pred CCCCEEEEECCCCHHHHHHHHhcCCceEEEecCCCCCCHHHHHHHhcCCeEEEECCCCCCCHHHHHhcCCCceEEEECCc
Confidence 35678999999988888888876 4555432 346789999999999999877778999999987459999999999
Q ss_pred cccccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCccccc---ccceeeecCCEEEEEeCCh
Q 046427 126 GIDNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRN---KYVGVSLVGKTLAVMGFGK 202 (595)
Q Consensus 126 G~d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~---~~~g~~l~gktvGIIGlG~ 202 (595)
||||||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|.|.+. .+.|.++.|++|||||+|.
T Consensus 86 G~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~ 165 (330)
T 2gcg_A 86 GIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGR 165 (330)
T ss_dssp CCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSH
T ss_pred ccccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCH
Confidence 9999999999999999999999999999999999999999999999999999999742 2357899999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEec
Q 046427 203 VGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNV 281 (595)
Q Consensus 203 IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~ 281 (595)
||+.+|++++++||+|++||++. ..+.+.+.|+...++++++++||+|++|+|.+++|+++++++.++.||+|++|||+
T Consensus 166 iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~ 245 (330)
T 2gcg_A 166 IGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINI 245 (330)
T ss_dssp HHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEEC
Confidence 99999999999999999999876 34445566776669999999999999999999999999999999999999999999
Q ss_pred cCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCC
Q 046427 282 ARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELAA 361 (595)
Q Consensus 282 arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~ 361 (595)
+||+++|+++|.++|++|+++||++|||++||++.++|||+++|+++|||+|+.|.|++.+++..+++|+.+|++|+++.
T Consensus 246 srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~ 325 (330)
T 2gcg_A 246 SRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPMP 325 (330)
T ss_dssp SCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCCCT
T ss_pred CCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999989999999999999999999999999999999999999999999888
Q ss_pred cccc
Q 046427 362 TAVN 365 (595)
Q Consensus 362 ~~vn 365 (595)
+.||
T Consensus 326 ~~v~ 329 (330)
T 2gcg_A 326 SELK 329 (330)
T ss_dssp TEEC
T ss_pred CCCC
Confidence 8887
No 31
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=3e-60 Score=495.03 Aligned_cols=297 Identities=22% Similarity=0.277 Sum_probs=259.1
Q ss_pred CCCeEEEecCCC--hhHHHHhhc-CCcEEecCCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcccccc
Q 046427 52 SKPTVLVAEKLG--EAGLDVLKN-FANVDCSYNLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGID 128 (595)
Q Consensus 52 ~~~~il~~~~~~--~~~~~~l~~-~~~v~~~~~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d 128 (595)
|.+||++..... +...+.|++ ++++++... +.+ ...++|+++++. .++++++. |+||||++.|+|||
T Consensus 2 ~~mkil~~~~~~~~~~~~~~l~~~~p~~~~~~~-~~~----~~~~ad~~i~~~---~~~~~l~~--~~Lk~I~~~~aG~d 71 (315)
T 3pp8_A 2 NAMEIIFYHPTFNAAWWVNALEKALPHARVREW-KVG----DNNPADYALVWQ---PPVEMLAG--RRLKAVFVLGAGVD 71 (315)
T ss_dssp CCEEEEEECSSSCHHHHHHHHHHHSTTEEEEEC-CTT----CCSCCSEEEESS---CCHHHHTT--CCCSEEEESSSCCH
T ss_pred CceEEEEEcCCCchHHHHHHHHHHCCCCEEEec-CCC----CccCcEEEEECC---CCHHHhCC--CCceEEEECCEecc
Confidence 457899877654 445566664 346555322 111 356999999853 58999987 59999999999999
Q ss_pred cc-C-hhh---HHhCCceEEeCCCCC-chHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCCh
Q 046427 129 NV-D-LSA---ATEHGCLVVNAPTAN-TIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGK 202 (595)
Q Consensus 129 ~i-D-~~a---a~~~gI~V~n~p~~~-~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~ 202 (595)
|| | +++ +.++||.|+|+|+++ +.+||||++++||+++|+++.+++.+++|+|.+. .+.+++||||||||+|+
T Consensus 72 ~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~--~~~~l~g~tvGIiG~G~ 149 (315)
T 3pp8_A 72 AILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPL--PEYTREEFSVGIMGAGV 149 (315)
T ss_dssp HHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC--CCCCSTTCCEEEECCSH
T ss_pred cccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCC--CCCCcCCCEEEEEeeCH
Confidence 99 7 887 788999999999865 7999999999999999999999999999999864 57899999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCc----ccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEE
Q 046427 203 VGTEVARRAKGLGMNVIAHDPYAQADRARATGVG----LVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRI 278 (595)
Q Consensus 203 IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~----~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gail 278 (595)
||+.+|+++++|||+|++||++.... .++. ..++++++++||+|++|+|++++|+++|+++.|+.||+|++|
T Consensus 150 IG~~vA~~l~~~G~~V~~~dr~~~~~----~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gail 225 (315)
T 3pp8_A 150 LGAKVAESLQAWGFPLRCWSRSRKSW----PGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYV 225 (315)
T ss_dssp HHHHHHHHHHTTTCCEEEEESSCCCC----TTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCchhh----hhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEE
Confidence 99999999999999999999876321 1221 247999999999999999999999999999999999999999
Q ss_pred EeccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCC
Q 046427 279 VNVARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGE 358 (595)
Q Consensus 279 iN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~ 358 (595)
||+|||+++|+++|+++|++|+++||+||||++||++.++|||++|||++|||+|++|.+ .++...+++|+.+|++|+
T Consensus 226 IN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~ni~~~~~G~ 303 (315)
T 3pp8_A 226 LNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIAAVTRP--AEAIDYISRTITQLEKGE 303 (315)
T ss_dssp EECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSCSSCCCH--HHHHHHHHHHHHHHHHTC
T ss_pred EECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCCCcccHH--HHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999999999999999999986 468899999999999999
Q ss_pred CCCccccC
Q 046427 359 LAATAVNA 366 (595)
Q Consensus 359 ~~~~~vn~ 366 (595)
++.+.||.
T Consensus 304 ~~~~~V~~ 311 (315)
T 3pp8_A 304 PVTGQVDR 311 (315)
T ss_dssp CCCCBCCC
T ss_pred CCCceECc
Confidence 99999985
No 32
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.1e-58 Score=481.43 Aligned_cols=293 Identities=23% Similarity=0.276 Sum_probs=265.2
Q ss_pred eEEEecCCChhHHHHhhcCCcEEecCCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEccccccccChhh
Q 046427 55 TVLVAEKLGEAGLDVLKNFANVDCSYNLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDNVDLSA 134 (595)
Q Consensus 55 ~il~~~~~~~~~~~~l~~~~~v~~~~~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~iD~~a 134 (595)
|||+++.+.+...+.|++.. .++. .+.++++|+++++. .+.++++++ |+||||++.|+|+||||+++
T Consensus 2 ~il~~~~~~~~~~~~l~~~~-~~v~--------~~~~~~~d~~i~~~---~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~ 68 (303)
T 1qp8_A 2 ELYVNFELPPEAEEELRKYF-KIVR--------GGDLGNVEAALVSR---ITAEELAKM-PRLKFIQVVTAGLDHLPWES 68 (303)
T ss_dssp EEECCSCCCHHHHHHHHTTC-EEEC--------SSCCTTBCCCCBSC---CCHHHHHHC-TTCCCEEBSSSCCTTSCCTT
T ss_pred EEEEccCCCHHHHHHHHhcC-Cccc--------hhhhCCCEEEEECC---CCHHHHhhC-CCCcEEEECCcCcccccHHH
Confidence 79999999999888887752 2221 14678999988754 467999987 69999999999999999998
Q ss_pred HHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHHHHhcC
Q 046427 135 ATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVARRAKGL 214 (595)
Q Consensus 135 a~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~ 214 (595)
+ ++||.|+|+||+++.+||||++++||+++|+++.+++.+++|.|.+. ..+.++.||||||||+|+||+.+|+++++|
T Consensus 69 ~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~-~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 146 (303)
T 1qp8_A 69 I-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRD-VEIPLIQGEKVAVLGLGEIGTRVGKILAAL 146 (303)
T ss_dssp S-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC-SCCCCCTTCEEEEESCSTHHHHHHHHHHHT
T ss_pred H-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCC-CCCCCCCCCEEEEEccCHHHHHHHHHHHHC
Confidence 5 79999999999999999999999999999999999999999999753 234589999999999999999999999999
Q ss_pred CCEEEEECCCCcHHHHHHcCC-cccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHH
Q 046427 215 GMNVIAHDPYAQADRARATGV-GLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALV 293 (595)
Q Consensus 215 G~~V~~~d~~~~~~~a~~~g~-~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~ 293 (595)
||+|++||++.. +. +. ...++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+
T Consensus 147 G~~V~~~dr~~~-~~----~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~ 221 (303)
T 1qp8_A 147 GAQVRGFSRTPK-EG----PWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVL 221 (303)
T ss_dssp TCEEEEECSSCC-CS----SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHH
T ss_pred CCEEEEECCCcc-cc----CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHH
Confidence 999999998765 21 33 3458999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeeEEEEecC-CCCCCCCCcccccCCcEEEcCCCCCC--cHHHHHHHHHHHHHHHHHHHcCCCCCccccCC
Q 046427 294 RALDSGIISQAALDVF-TEEPPAKDSKLVLHENVTVTPHLGAS--TTEAQEGVAIEIAEAVIGALKGELAATAVNAP 367 (595)
Q Consensus 294 ~aL~~g~i~ga~lDv~-~~EP~~~~~~L~~~~nvilTPHi~~~--t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn~~ 367 (595)
++|++|+++||++||| ++||+++++|||++||+++|||++++ |.|++.+++..+++|+.+|++|+.+.+.||..
T Consensus 222 ~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltPH~~~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~v~~~ 298 (303)
T 1qp8_A 222 RILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGGYGNERVWRQMVMEAVRNLITYATGGRPRNIAKRE 298 (303)
T ss_dssp HHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSSSSSCHHHHHHHHHHHHHHHHHHHTTSCCSCBCCGG
T ss_pred HHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECCCcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceeCHH
Confidence 9999999999999999 88999889999999999999999998 99999999999999999999999999988843
No 33
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=6.7e-57 Score=478.14 Aligned_cols=279 Identities=28% Similarity=0.405 Sum_probs=248.9
Q ss_pred CCCeEEEecCCChhHHHHhhcCCcEEecCC--CCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEccccccc
Q 046427 52 SKPTVLVAEKLGEAGLDVLKNFANVDCSYN--LSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDN 129 (595)
Q Consensus 52 ~~~~il~~~~~~~~~~~~l~~~~~v~~~~~--~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~ 129 (595)
+++|||+.+.++ ...+.+++.+++.+... .+.+ .++++|++++++.+++++++++ + ++||||+++|+|+||
T Consensus 2 ~mmkIl~~~~~p-~~~~~~~~~~~v~~~~~~~~~~~----~l~~ad~li~~~~~~v~~~ll~-~-~~Lk~I~~~~~G~D~ 74 (381)
T 3oet_A 2 NAMKILVDENMP-YARELFSRLGEVKAVPGRPIPVE----ELNHADALMVRSVTKVNESLLS-G-TPINFVGTATAGTDH 74 (381)
T ss_dssp CCCEEEEETTST-THHHHHTTSSEEEEECC---CHH----HHTTCSEEEECTTSCBSHHHHT-T-SCCCEEEESSSCCTT
T ss_pred CceEEEECCCCc-HHHHHHhhCCcEEEeCCCCCCHH----HHCCCEEEEECCCCCCCHHHHc-C-CCCEEEEEccccccc
Confidence 347899998875 45778888888766432 2333 4789999999988899999999 4 469999999999999
Q ss_pred cChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHH
Q 046427 130 VDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVAR 209 (595)
Q Consensus 130 iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~ 209 (595)
||+++|+++||.|+|+||+|+.+||||+++++|+++|+. |.+|+||||||||+|+||+.+|+
T Consensus 75 iD~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~------------------g~~l~gktvGIIGlG~IG~~vA~ 136 (381)
T 3oet_A 75 VDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD------------------GFSLRDRTIGIVGVGNVGSRLQT 136 (381)
T ss_dssp BCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT------------------TCCGGGCEEEEECCSHHHHHHHH
T ss_pred cCHHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc------------------CCccCCCEEEEEeECHHHHHHHH
Confidence 999999999999999999999999999999999999852 45799999999999999999999
Q ss_pred HHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChh----ccccccHHHHhcCCCceEEEeccCCc
Q 046427 210 RAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPA----TSKMFNDEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 210 ~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~----t~~li~~~~l~~mk~gailiN~arg~ 285 (595)
++++|||+|++||++.. ....+....++++++++||+|++|+|++++ |+++++++.|+.||+|++|||+|||+
T Consensus 137 ~l~a~G~~V~~~d~~~~---~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~ 213 (381)
T 3oet_A 137 RLEALGIRTLLCDPPRA---ARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGP 213 (381)
T ss_dssp HHHHTTCEEEEECHHHH---HTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGG
T ss_pred HHHHCCCEEEEECCChH---HhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCc
Confidence 99999999999998432 112445667999999999999999999999 99999999999999999999999999
Q ss_pred hhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 046427 286 VVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELA 360 (595)
Q Consensus 286 ~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~ 360 (595)
++|+++|+++|++|+++||+||||++||++ +++||.++ +++|||+||+|.|++.+++.++++|+.+|+.+...
T Consensus 214 vvde~aL~~aL~~g~i~gA~LDV~e~EP~~-~~~L~~~~-~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~~~~~ 286 (381)
T 3oet_A 214 VVDNAALLARLNAGQPLSVVLDVWEGEPDL-NVALLEAV-DIGTSHIAGYTLEGKARGTTQVFEAYSAFIGREQR 286 (381)
T ss_dssp GBCHHHHHHHHHTTCCEEEEESCCTTTTSC-CHHHHHHS-SEECSSCTTCCHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ccCHHHHHHHHHhCCCeEEEeeccccCCCC-cchhhhCC-EEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 999999999999999999999999999985 56799775 78999999999999999999999999999987643
No 34
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.8e-56 Score=461.09 Aligned_cols=278 Identities=28% Similarity=0.356 Sum_probs=240.5
Q ss_pred eEEEecCCCh----hHHHHhhcCCcEEecCCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcccccccc
Q 046427 55 TVLVAEKLGE----AGLDVLKNFANVDCSYNLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDNV 130 (595)
Q Consensus 55 ~il~~~~~~~----~~~~~l~~~~~v~~~~~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~i 130 (595)
+|++..++.. .+.+.|+.+. +.. .+.++++|++++ +..++ ++ |+||||++.|+|||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~---------~~~~~~ad~li~-~~~~~------~~-~~Lk~I~~~~~G~d~i 63 (290)
T 3gvx_A 2 DVYVNFPADGHVREIAKTVLDGFD-LHW---------YPDYYDAEAQVI-KDRYV------LG-KRTKMIQAISAGVDHI 63 (290)
T ss_dssp CEEECSCCCHHHHHHHHHHTTTSC-EEE---------TTSCCCCSEEEE-SSCCC------CC-SSCCEEEECSSCCTTS
T ss_pred ceEEecCCcchHHHHHHHHhcccc-ccc---------Ccchhhhhhhhh-hhhhh------hh-hhhHHHHHHhcCCcee
Confidence 4566666554 4445555442 222 157889999998 44443 44 6999999999999999
Q ss_pred ChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHHH
Q 046427 131 DLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVARR 210 (595)
Q Consensus 131 D~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~ 210 (595)
|+++|+++||.++| ++.++.+||||++++||+++|+++.+++.+++|+|.+.. ..+|+||||||||+|.||+++|++
T Consensus 64 d~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~--~~~l~g~tvGIIGlG~IG~~vA~~ 140 (290)
T 3gvx_A 64 DVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNILENNELMKAGIFRQSP--TTLLYGKALGILGYGGIGRRVAHL 140 (290)
T ss_dssp CGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCC--CCCCTTCEEEEECCSHHHHHHHHH
T ss_pred ecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhhhhhhhHhhhcccccCC--ceeeecchheeeccCchhHHHHHH
Confidence 99999997776655 588999999999999999999999999999999998753 368999999999999999999999
Q ss_pred HhcCCCEEEEECCCCcHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcH
Q 046427 211 AKGLGMNVIAHDPYAQADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDE 289 (595)
Q Consensus 211 l~~~G~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~ 289 (595)
+++|||+|++||++..... .+... ++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+
T Consensus 141 l~~~G~~V~~~dr~~~~~~----~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~ 216 (290)
T 3gvx_A 141 AKAFGMRVIAYTRSSVDQN----VDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSK 216 (290)
T ss_dssp HHHHTCEEEEECSSCCCTT----CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCH
T ss_pred HHhhCcEEEEEeccccccc----cccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCC
Confidence 9999999999999763221 13444 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCC-CCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 046427 290 EALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLG-ASTTEAQEGVAIEIAEAVIGALKGELA 360 (595)
Q Consensus 290 ~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~-~~t~ea~~~~~~~~~~~l~~~l~g~~~ 360 (595)
++|+++|++|+++||++|||+.||+ +|||++||+++|||+| ++|.|+++++...+++|+.+|++|++-
T Consensus 217 ~aL~~aL~~g~i~ga~lDV~~~EP~---~pL~~~~nvilTPHiag~~t~e~~~~~~~~~~~ni~~~~~~~~~ 285 (290)
T 3gvx_A 217 PDMIGFLKERSDVWYLSDVWWNEPE---ITETNLRNAILSPHVAGGMSGEIMDIAIQLAFENVRNFFEGEGH 285 (290)
T ss_dssp HHHHHHHHHCTTCEEEESCCTTTTS---CCSCCCSSEEECCSCSSCBTTBCCHHHHHHHHHHHHHHTC----
T ss_pred cchhhhhhhccceEEeeccccCCcc---cchhhhhhhhcCccccCCccchHHHHHHHHHHHHHHhhhcCCCc
Confidence 9999999999999999999999986 8999999999999999 999999999999999999999998763
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.1e-54 Score=457.86 Aligned_cols=281 Identities=29% Similarity=0.400 Sum_probs=247.8
Q ss_pred CeEEEecCCChhHHHHhhcCCcEEecCCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEccccccccChh
Q 046427 54 PTVLVAEKLGEAGLDVLKNFANVDCSYNLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDNVDLS 133 (595)
Q Consensus 54 ~~il~~~~~~~~~~~~l~~~~~v~~~~~~~~~el~~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~iD~~ 133 (595)
+||++.+.++. ..+.+++.+++.+... .+...+.+.++|++++++.+++++++++ + |+||||+++|+|+||||++
T Consensus 1 mkil~~~~~~~-~~~~~~~~~~v~~~~~--~~~~~~~l~~ad~li~~~~~~~~~~~l~-~-~~Lk~I~~~~~G~D~iD~~ 75 (380)
T 2o4c_A 1 MRILADENIPV-VDAFFADQGSIRRLPG--RAIDRAALAEVDVLLVRSVTEVSRAALA-G-SPVRFVGTCTIGTDHLDLD 75 (380)
T ss_dssp CEEEEETTCTT-HHHHHGGGSEEEEECG--GGCSTTTTTTCSEEEECTTSCBCHHHHT-T-SCCCEEEECSSCSTTBCHH
T ss_pred CEEEEecCchH-HHHHHHhCCcEEEecC--CcCChHHHCCcEEEEEcCCCCCCHHHhc-C-CCceEEEEcCcccchhhHH
Confidence 37888887654 4667777666654321 1112234689999999888899999999 6 6999999999999999999
Q ss_pred hHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHHHHhc
Q 046427 134 AATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVARRAKG 213 (595)
Q Consensus 134 aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~ 213 (595)
+|+++||.|+|+||+|+.+||||++++||+++|+ | |.++.|+||||||+|+||+.+|+++++
T Consensus 76 ~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~------------~------~~~l~g~tvGIIGlG~IG~~vA~~l~~ 137 (380)
T 2o4c_A 76 YFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEV------------R------GADLAERTYGVVGAGQVGGRLVEVLRG 137 (380)
T ss_dssp HHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHH------------H------TCCGGGCEEEEECCSHHHHHHHHHHHH
T ss_pred HHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhh------------h------hcccCCCEEEEEeCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999996 2 357999999999999999999999999
Q ss_pred CCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChh----ccccccHHHHhcCCCceEEEeccCCchhcH
Q 046427 214 LGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPA----TSKMFNDEAFFKMKKGVRIVNVARGGVVDE 289 (595)
Q Consensus 214 ~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~----t~~li~~~~l~~mk~gailiN~arg~~vd~ 289 (595)
|||+|++||++... ...+....++++++++||+|++|+|++++ |+++++++.|+.||+|++|||+|||+++|+
T Consensus 138 ~G~~V~~~d~~~~~---~~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~ 214 (380)
T 2o4c_A 138 LGWKVLVCDPPRQA---REPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDN 214 (380)
T ss_dssp TTCEEEEECHHHHH---HSTTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCH
T ss_pred CCCEEEEEcCChhh---hccCcccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCH
Confidence 99999999975421 13455667999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 046427 290 EALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELAAT 362 (595)
Q Consensus 290 ~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~ 362 (595)
++|+++|++|+++||+||||++||+ .+++|+. +|+++|||+|++|.|++.++...+++|+.+|+.|....+
T Consensus 215 ~aL~~aL~~g~i~~A~LDV~~~EP~-~~~~l~~-~nvi~TPHiag~t~e~~~~~~~~~~~nl~~~l~g~~~~~ 285 (380)
T 2o4c_A 215 QALRRLLEGGADLEVALDVWEGEPQ-ADPELAA-RCLIATPHIAGYSLEGKLRGTAQIYQAYCAWRGIAERVS 285 (380)
T ss_dssp HHHHHHHHTTCCEEEEESCCTTTTS-CCHHHHT-TCSEECSSCTTCCHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred HHHHHHHHhCCCceEEeeeeccCCC-Cchhhcc-CCEEEccccCcCCHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 9999999999999999999999996 4678886 599999999999999999999999999999999886444
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=100.00 E-value=1.2e-38 Score=347.09 Aligned_cols=271 Identities=17% Similarity=0.196 Sum_probs=232.4
Q ss_pred CCceEEE-EccccccccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCC
Q 046427 115 GRLKVVG-RAGVGIDNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGK 193 (595)
Q Consensus 115 ~~Lk~I~-~~g~G~d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gk 193 (595)
++++.|+ .+++|+|++ ++|+++||.|+|+|++|. +||| +++|++....+.++.| |.+ +.+.++.||
T Consensus 192 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~r--~~~~~l~Gk 258 (479)
T 1v8b_A 192 KKIIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LMR--ATDFLISGK 258 (479)
T ss_dssp TTCCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HHH--HHCCCCTTS
T ss_pred cCeEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hhh--ccccccCCC
Confidence 5899998 889999998 899999999999999999 9999 4578999899999988 975 457789999
Q ss_pred EEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcC
Q 046427 194 TLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKM 272 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~m 272 (595)
+|||||+|.||+.+|+++++|||+|++||++... ..+...|++..++++++++||+|++|+ .|+++|+++.|+.|
T Consensus 259 tVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~----~t~~lI~~~~l~~M 334 (479)
T 1v8b_A 259 IVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCT----GNVDVIKLEHLLKM 334 (479)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECC----SSSSSBCHHHHTTC
T ss_pred EEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECC----ChhhhcCHHHHhhc
Confidence 9999999999999999999999999999998743 245667887789999999999999995 68999999999999
Q ss_pred CCceEEEeccCCch-hcHHHHHH--HHhcCCeeEEEEecCCCCCCCCCcccccC--CcEEEcCCCC-CCcHH-HHHHHHH
Q 046427 273 KKGVRIVNVARGGV-VDEEALVR--ALDSGIISQAALDVFTEEPPAKDSKLVLH--ENVTVTPHLG-ASTTE-AQEGVAI 345 (595)
Q Consensus 273 k~gailiN~arg~~-vd~~aL~~--aL~~g~i~ga~lDv~~~EP~~~~~~L~~~--~nvilTPHi~-~~t~e-a~~~~~~ 345 (595)
|+|++|||+|||++ ||+++|.+ +|++|+|+ +++|||. ++.++|||.+ +|+++| |+| +++.+ ++..++.
T Consensus 335 K~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~p---lp~~~~l~~l~~~nvv~t-H~atghp~e~~~~s~a~ 409 (479)
T 1v8b_A 335 KNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRIT---LPNGNKIIVLARGRLLNL-GCATGHPAFVMSFSFCN 409 (479)
T ss_dssp CTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEEE---CTTSCEEEEEGGGSBHHH-HSSCCSCHHHHHHHHHH
T ss_pred CCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEEE---CCCCCeeeEecCCCEEEE-eccCCCCchhHHHHHHH
Confidence 99999999999999 99999999 99999997 9999983 4457899988 999999 999 66766 7888999
Q ss_pred HHHHHHHHHHcCC--CCCccccCCCCChhhhhcccchhHHHHHHHHHHHHHhcCCCCceEEEEEEeecCC
Q 046427 346 EIAEAVIGALKGE--LAATAVNAPMVPAEVISELAPFVTLAEKLGGLAVQLVAGGSGVKSVKVSYASARG 413 (595)
Q Consensus 346 ~~~~~l~~~l~g~--~~~~~vn~~~~~~~~~~~~~p~~~la~rlG~l~~qL~~g~~~~k~v~i~~~Gs~a 413 (595)
++++|+..|++|+ ...+.|+. ++..+-+.+.+ +.| +++|....||..+ ..+.+.+.+.|.+.
T Consensus 410 ~~~~ni~~~~~g~~~~l~n~V~~--lp~~~de~va~-l~L-~~lG~~l~~lt~~--q~~yi~v~~~g~~~ 473 (479)
T 1v8b_A 410 QTFAQLDLWQNKDTNKYENKVYL--LPKHLDEKVAL-YHL-KKLNASLTELDDN--QCQFLGVNKSGPFK 473 (479)
T ss_dssp HHHHHHHHHHTTTSSSCCSSEEC--CCHHHHHHHHH-HHH-GGGTCCCCCCCHH--HHHHHTCCTTSCCS
T ss_pred HHHHHHHHHHcCCCCcCCcceEe--CChhhHHHHHH-HHH-HHcCChHhhcChh--hhhhEeeeeCCCCC
Confidence 9999999999998 77776652 33444445555 355 7777776777666 56667777778775
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=100.00 E-value=9.1e-39 Score=349.09 Aligned_cols=270 Identities=19% Similarity=0.226 Sum_probs=228.5
Q ss_pred CCceEEE-EccccccccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCC
Q 046427 115 GRLKVVG-RAGVGIDNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGK 193 (595)
Q Consensus 115 ~~Lk~I~-~~g~G~d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gk 193 (595)
+++|.|+ .+++|+|++ ++|+++||.|+|+|++|+ +|||+ ++|++....+.++.| |.+ ..+.++.||
T Consensus 212 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~-------l~r~~~~~~~~l~~g-w~~--~~g~~L~Gk 278 (494)
T 3d64_A 212 AHIKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKS-------KFDNLYGCRESLVDG-IKR--ATDVMIAGK 278 (494)
T ss_dssp TTCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------HHHHHHHHHTTHHHH-HHH--HHCCCCTTC
T ss_pred hCcEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHH-------HHhhhHhhhhhhhhh-hhh--ccccccCCC
Confidence 5899998 889999998 899999999999999999 99994 458887777777777 865 467899999
Q ss_pred EEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHH-HHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcC
Q 046427 194 TLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQAD-RARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKM 272 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~m 272 (595)
+|||||+|.||+.+|+++++|||+|++||++.... .+...|++..++++++++||+|++|+ +|+++|+++.|+.|
T Consensus 279 tVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~----~t~~lI~~~~l~~M 354 (494)
T 3d64_A 279 IAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTAT----GNYHVINHDHMKAM 354 (494)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECS----SSSCSBCHHHHHHC
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECC----CcccccCHHHHhhC
Confidence 99999999999999999999999999999987432 44566888889999999999999998 58999999999999
Q ss_pred CCceEEEeccCCch-hcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccC--CcEEEcCCCC-CCcHH-HHHHHHHHH
Q 046427 273 KKGVRIVNVARGGV-VDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLH--ENVTVTPHLG-ASTTE-AQEGVAIEI 347 (595)
Q Consensus 273 k~gailiN~arg~~-vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~--~nvilTPHi~-~~t~e-a~~~~~~~~ 347 (595)
|+|++|||+|||++ ||+++| ++|++|+|+ +++|+ +|++.++|||.+ ||+++| |+| +++.+ ++.+++..+
T Consensus 355 K~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv---~plp~~~pL~~l~~~nvv~t-H~atg~~~~~~~~~~a~~~ 428 (494)
T 3d64_A 355 RHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDH---IIFPDGKRVILLAEGRLVNL-GCATGHPSFVMSNSFTNQT 428 (494)
T ss_dssp CTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEE---EECTTSCEEEEEGGGSBHHH-HTSCCSCHHHHHHHHHHHH
T ss_pred CCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEE---EECCCCCchhhcCCCCEEEE-eCcCCCCHHHHHHHHHHHH
Confidence 99999999999999 699999 999999996 55554 577778999998 999999 999 66754 788899999
Q ss_pred HHHHHHHHcCCCCCccccCCCCChhhhhcccchhHHHHHHHHHHHHHhcCCCCceEEEEEEeecCC
Q 046427 348 AEAVIGALKGELAATAVNAPMVPAEVISELAPFVTLAEKLGGLAVQLVAGGSGVKSVKVSYASARG 413 (595)
Q Consensus 348 ~~~l~~~l~g~~~~~~vn~~~~~~~~~~~~~p~~~la~rlG~l~~qL~~g~~~~k~v~i~~~Gs~a 413 (595)
++|+..|++|+.+.+.|+. ++.++-+.+.+ +.| +++|..+.||..+ ..+.+.+.+.|.+.
T Consensus 429 ~~ni~~~~~g~~~~n~V~~--lp~~~d~~va~-l~L-~~~g~~~~~l~~~--q~~y~~v~~~g~~~ 488 (494)
T 3d64_A 429 LAQIELFTRGGEYANKVYV--LPKHLDEKVAR-LHL-ARIGAQLSELSDD--QAAYIGVSKAGPFK 488 (494)
T ss_dssp HHHHHHHHHGGGSCSSEEE--CCHHHHHHHHH-HHH-TTTTCCCCCCCHH--HHHHHTCCTTSCCS
T ss_pred HHHHHHHHcCCCCCCceee--CChhHHHHHHH-HHH-HHcCChHHhhChh--hHHhEeeccCCCCC
Confidence 9999999999988888852 23444445555 456 7777777777766 56667777778775
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.95 E-value=3.6e-28 Score=250.90 Aligned_cols=207 Identities=19% Similarity=0.217 Sum_probs=167.1
Q ss_pred CCCCCeEEEecC--CChhHHHHhhcC-CcEEecCC----------CCHhHHhhhcCCceEEEEc----------------
Q 046427 50 ITSKPTVLVAEK--LGEAGLDVLKNF-ANVDCSYN----------LSPEELCTKISLCDALIVR---------------- 100 (595)
Q Consensus 50 ~~~~~~il~~~~--~~~~~~~~l~~~-~~v~~~~~----------~~~~el~~~i~~~d~li~~---------------- 100 (595)
++..++|++... ......+.|.+. .+|.+... ...+++.+.++++|+++++
T Consensus 2 ~~~~m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~~~~~~ 81 (293)
T 3d4o_A 2 MLTGKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWNTVDAILLPISGTNEAGKVDTIFSN 81 (293)
T ss_dssp CCTTCEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGGGCSEEECCTTCCCTTCBCCBSSCS
T ss_pred CccCcEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHhcCCEEEeccccccCCceeeccccc
Confidence 345678888763 333455667664 36654321 1235677788899999875
Q ss_pred CCCCCCHHHHhccCCCceEEEEccccccccCh-hhHHhCCceEEeCC------CCCchHHHHHHHHHHHHHHHchHHHHH
Q 046427 101 SGTKVTREVFESSAGRLKVVGRAGVGIDNVDL-SAATEHGCLVVNAP------TANTIAAAEHGIALLTAMARNIAQADA 173 (595)
Q Consensus 101 ~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~iD~-~aa~~~gI~V~n~p------~~~~~~vAE~~l~l~l~~~R~i~~~~~ 173 (595)
..+++++++++.+ |+||+|+ +|+||+|+ ++|+++||.|+|+| ++|+.+||||+++++|..
T Consensus 82 ~~~~~~~~~l~~~-~~l~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~--------- 148 (293)
T 3d4o_A 82 ESIVLTEEMIEKT-PNHCVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQH--------- 148 (293)
T ss_dssp CCCBCCHHHHHTS-CTTCEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred CCccchHHHHHhC-CCCCEEE---ecCCCHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHh---------
Confidence 2346899999988 5899997 89999998 89999999999998 899999999999998852
Q ss_pred HHHcCcccccccceeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHHcCCcc---cCHHHhccccCE
Q 046427 174 SVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARATGVGL---VSFEEAISTADF 249 (595)
Q Consensus 174 ~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~---~~l~ell~~aD~ 249 (595)
.+.++.|+++||||+|.||+.+|+++++||++|++||++... +.+.+.|+.. .++++++++||+
T Consensus 149 ------------~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDv 216 (293)
T 3d4o_A 149 ------------TDFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDV 216 (293)
T ss_dssp ------------CSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSE
T ss_pred ------------cCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCE
Confidence 245799999999999999999999999999999999997632 3344567654 368899999999
Q ss_pred EEEeCCCChhccccccHHHHhcCCCceEEEeccCCch
Q 046427 250 ISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGV 286 (595)
Q Consensus 250 V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~ 286 (595)
|++|+|+ ++++++.++.||+++++||++||+.
T Consensus 217 Vi~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 217 CINTIPA-----LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp EEECCSS-----CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred EEECCCh-----HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 9999995 6889999999999999999999764
No 39
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.93 E-value=1e-27 Score=262.73 Aligned_cols=268 Identities=20% Similarity=0.201 Sum_probs=207.8
Q ss_pred CceEE-EEccccccccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCE
Q 046427 116 RLKVV-GRAGVGIDNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKT 194 (595)
Q Consensus 116 ~Lk~I-~~~g~G~d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gkt 194 (595)
+++-+ ..+|+|||++ .++.++||.+.|++++|. +|||+ +.|++....+.+..+ |.+ ..+..+.|++
T Consensus 210 ~i~GvveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~-------~~r~l~~~~~s~~~g-~~r--~~~~~l~Gkt 276 (494)
T 3ce6_A 210 SVKGVTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKS-------KFDNKYGTRHSLIDG-INR--GTDALIGGKK 276 (494)
T ss_dssp HCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------TTHHHHHHHHHHHHH-HHH--HHCCCCTTCE
T ss_pred CeEEEEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHH-------HHhhhhhhhhhhhHH-HHh--ccCCCCCcCE
Confidence 34444 4789999998 788999999999999999 99994 346666655555555 654 2345789999
Q ss_pred EEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCC
Q 046427 195 LAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMK 273 (595)
Q Consensus 195 vGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk 273 (595)
|+|+|+|.||+.+|++++++|++|+++|++.. .+.+.+.|+...+++++++++|+|++|++ +.++++.+.++.||
T Consensus 277 V~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atg----t~~~i~~~~l~~mk 352 (494)
T 3ce6_A 277 VLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATG----NKDIIMLEHIKAMK 352 (494)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSS----SSCSBCHHHHHHSC
T ss_pred EEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCC----CHHHHHHHHHHhcC
Confidence 99999999999999999999999999999874 35677889887789999999999999985 56788888999999
Q ss_pred CceEEEeccCCch-hcHHHHHH-HHhcCCeeEEEEecCCCCCCCCCcc--cccCCcEE----EcCCCCCCcHHHHHHHHH
Q 046427 274 KGVRIVNVARGGV-VDEEALVR-ALDSGIISQAALDVFTEEPPAKDSK--LVLHENVT----VTPHLGASTTEAQEGVAI 345 (595)
Q Consensus 274 ~gailiN~arg~~-vd~~aL~~-aL~~g~i~ga~lDv~~~EP~~~~~~--L~~~~nvi----lTPHi~~~t~ea~~~~~~ 345 (595)
+|++|+|++|++. +|+++|.+ +++++++. +++|+|+.++. .++ |+..++++ +|||+++.+.++. ..
T Consensus 353 ~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~--~~~l~LL~~grlvnL~~~TPH~a~~~~~s~---~~ 426 (494)
T 3ce6_A 353 DHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDT--GRSIIVLSEGRLLNLGNATGHPSFVMSNSF---AN 426 (494)
T ss_dssp TTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTT--CCEEEEEGGGSCHHHHHSCCSCHHHHHHHH---HH
T ss_pred CCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCc--chHHHHHhCCCEEeccCCCCCccccchHHH---HH
Confidence 9999999999998 89999988 88888886 66899876432 344 66678887 9999999888763 67
Q ss_pred HHHHHHHHHHcCCCCCcccc-CCCCChhhhhcccchhHHHHHHHHHHHHHhcCCCCceEEEEEEeecCC
Q 046427 346 EIAEAVIGALKGELAATAVN-APMVPAEVISELAPFVTLAEKLGGLAVQLVAGGSGVKSVKVSYASARG 413 (595)
Q Consensus 346 ~~~~~l~~~l~g~~~~~~vn-~~~~~~~~~~~~~p~~~la~rlG~l~~qL~~g~~~~k~v~i~~~Gs~a 413 (595)
++.+++..+++|+...+.|. .|..+++.+..+ .| .++|..+.+|..+ ..+.+.+.+.|.|.
T Consensus 427 qa~~ai~~~~~g~~~~~~V~~~P~~~De~vA~l----hL-~~lg~~l~~lt~~--q~~y~~v~~~G~~k 488 (494)
T 3ce6_A 427 QTIAQIELWTKNDEYDNEVYRLPKHLDEKVARI----HV-EALGGHLTKLTKE--QAEYLGVDVEGPYK 488 (494)
T ss_dssp HHHHHHHHHHTGGGCCSSEECCCHHHHHHHHHH----HH-HHHTCCCCCCCHH--HHHHHTCCTTSCCS
T ss_pred HHHHHHHHHHcCCCCCCEEEECHHHHHHHHHHh----hH-HHHHHHHHHhChh--HHHHcccccCCCCC
Confidence 88999999999876665553 344444444333 44 5556555555554 44455566666665
No 40
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.93 E-value=1.1e-25 Score=233.00 Aligned_cols=209 Identities=16% Similarity=0.178 Sum_probs=161.2
Q ss_pred CCCeEEEecC--CChhHHHHhhcCC-cEEecCCCC-----------HhHHhhhcCCceEEEE----cC----------CC
Q 046427 52 SKPTVLVAEK--LGEAGLDVLKNFA-NVDCSYNLS-----------PEELCTKISLCDALIV----RS----------GT 103 (595)
Q Consensus 52 ~~~~il~~~~--~~~~~~~~l~~~~-~v~~~~~~~-----------~~el~~~i~~~d~li~----~~----------~~ 103 (595)
+.+||++... ......+.|.+.+ +|.... .+ .+++.+.++++|++++ .. .+
T Consensus 6 ~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~-~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a~~ 84 (300)
T 2rir_A 6 TGLKIAVIGGDARQLEIIRKLTEQQADIYLVG-FDQLDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFSNE 84 (300)
T ss_dssp CSCEEEEESBCHHHHHHHHHHHHTTCEEEEES-CTTSSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSCSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEe-ccccccccccceeccchHHHHhcCCEEEeccccccCCcccccccccC
Confidence 3468888765 3334456666543 555431 11 2345667889999987 21 35
Q ss_pred C--CCHHHHhccCCCceEEEEccccccccC-hhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcc
Q 046427 104 K--VTREVFESSAGRLKVVGRAGVGIDNVD-LSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKW 180 (595)
Q Consensus 104 ~--i~~~~l~~~~~~Lk~I~~~g~G~d~iD-~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W 180 (595)
+ +++++++.+ |++|+|+ +|+||+| +++|+++||.|+|+|+++ ++ +++|+++.+ +|.|
T Consensus 85 ~~~~~~~~l~~~-~~l~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~--~v---------~~~r~~~~~-----~g~~ 144 (300)
T 2rir_A 85 EVVLKQDHLDRT-PAHCVIF---SGISNAYLENIAAQAKRKLVKLFERD--DI---------AIYNSIPTV-----EGTI 144 (300)
T ss_dssp CEECCHHHHHTS-CTTCEEE---ESSCCHHHHHHHHHTTCCEEEGGGSH--HH---------HHHHHHHHH-----HHHH
T ss_pred CccchHHHHhhc-CCCCEEE---EecCCHHHHHHHHHCCCEEEeecCCC--ce---------EEEcCccHH-----HHHH
Confidence 6 899999987 5899998 8999999 999999999999999975 22 345766655 4557
Q ss_pred ccc-ccceeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHHcCCc---ccCHHHhccccCEEEEeCC
Q 046427 181 QRN-KYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARATGVG---LVSFEEAISTADFISLHMP 255 (595)
Q Consensus 181 ~~~-~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~---~~~l~ell~~aD~V~l~~P 255 (595)
... ...+.++.|+++||||+|.||+.+|+++++||++|++||++... +...+.|++ ..++++++++||+|++|+|
T Consensus 145 ~~~~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p 224 (300)
T 2rir_A 145 MLAIQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIP 224 (300)
T ss_dssp HHHHHTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCS
T ss_pred HHHHHhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCC
Confidence 532 23567899999999999999999999999999999999997632 233455664 2479999999999999999
Q ss_pred CChhccccccHHHHhcCCCceEEEeccCCch
Q 046427 256 LTPATSKMFNDEAFFKMKKGVRIVNVARGGV 286 (595)
Q Consensus 256 lt~~t~~li~~~~l~~mk~gailiN~arg~~ 286 (595)
+ ++++++.++.||+|+++||++||+.
T Consensus 225 ~-----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 225 S-----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp S-----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred h-----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 6 6889999999999999999999864
No 41
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.90 E-value=4.7e-23 Score=220.01 Aligned_cols=245 Identities=18% Similarity=0.199 Sum_probs=183.3
Q ss_pred CChhHHHHhhcCC-cEEec------CCCCHhHHh-----------hhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEc
Q 046427 62 LGEAGLDVLKNFA-NVDCS------YNLSPEELC-----------TKISLCDALIVRSGTKVTREVFESSAGRLKVVGRA 123 (595)
Q Consensus 62 ~~~~~~~~l~~~~-~v~~~------~~~~~~el~-----------~~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~ 123 (595)
+.++..+.|.+.+ +|.+. ..++.+++. +.++++|+| +....++++++.... ++..+++..
T Consensus 18 ltP~~v~~L~~~G~~V~ve~~ag~~~~f~d~~y~~aGa~i~~~~~~~~~~adii-~~vk~p~~~e~~~l~-~~~~l~~~~ 95 (377)
T 2vhw_A 18 ITPAGVAELTRRGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWADADLL-LKVKEPIAAEYGRLR-HGQILFTFL 95 (377)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEESCHHHHHHHCSEE-ECSSCCCGGGGGGCC-TTCEEEECC
T ss_pred cCHHHHHHHHhCCCEEEEeCCCCcCCCCCHHHHHHCCCEEecCHHHHhccCCEE-EEeCCCChHHHhhcC-CCCEEEEEe
Confidence 4566667775543 55442 345555554 234568976 455567777777655 578888888
Q ss_pred cccccccChhhHHhCCceEE----------eCCCCCchHHHHHHHHHHHHHH-HchHHHHHHHHcCcccccccceeeecC
Q 046427 124 GVGIDNVDLSAATEHGCLVV----------NAPTANTIAAAEHGIALLTAMA-RNIAQADASVKAGKWQRNKYVGVSLVG 192 (595)
Q Consensus 124 g~G~d~iD~~aa~~~gI~V~----------n~p~~~~~~vAE~~l~l~l~~~-R~i~~~~~~~~~g~W~~~~~~g~~l~g 192 (595)
..++|..+++++.++||++. |.|.+++. ||++..+++.++ |++. ..+.|+|.... ...++.|
T Consensus 96 ~~~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~s~~--ae~ag~~a~~~a~r~l~----~~~~g~~~~~~-~~~~l~g 168 (377)
T 2vhw_A 96 HLAASRACTDALLDSGTTSIAYETVQTADGALPLLAPM--SEVAGRLAAQVGAYHLM----RTQGGRGVLMG-GVPGVEP 168 (377)
T ss_dssp CGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHH--HHHHHHHHHHHHHHHTS----GGGTSCCCCTT-CBTTBCC
T ss_pred cccCCHHHHHHHHHcCCeEEEeeeccccCCCccccCch--HHHHHHHHHHHHHHHHH----HhcCCCccccc-CCCCCCC
Confidence 88999999999999999997 66766654 599985555444 7773 34455543211 1136899
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHH-cCCc-------ccCHHHhccccCEEEEeC--CCChhcc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARA-TGVG-------LVSFEEAISTADFISLHM--PLTPATS 261 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-~g~~-------~~~l~ell~~aD~V~l~~--Plt~~t~ 261 (595)
++|+|+|+|.||+.+|+.++++|++|+++|++... +.+.+ .|.. ..+++++++++|+|+.|+ |.+ ++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~-~t~ 247 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA-KAP 247 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS-CCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC-CCc
Confidence 99999999999999999999999999999997633 33333 4543 235788899999999977 554 688
Q ss_pred ccccHHHHhcCCCceEEEecc--CCchhcHHHHHHHHhcCCeeEEEEecCCC-CCCCCCcccccCCcEE--EcCCCCCCc
Q 046427 262 KMFNDEAFFKMKKGVRIVNVA--RGGVVDEEALVRALDSGIISQAALDVFTE-EPPAKDSKLVLHENVT--VTPHLGAST 336 (595)
Q Consensus 262 ~li~~~~l~~mk~gailiN~a--rg~~vd~~aL~~aL~~g~i~ga~lDv~~~-EP~~~~~~L~~~~nvi--lTPHi~~~t 336 (595)
++++++.++.||+|++|||++ +|+ ||+. ||.+.++|+|..+|++ +|||+++.+
T Consensus 248 ~li~~~~l~~mk~g~~iV~va~~~Gg----------------------v~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~ 305 (377)
T 2vhw_A 248 KLVSNSLVAHMKPGAVLVDIAIDQGG----------------------CFEGSRPTTYDHPTFAVHDTLFYCVANMPASV 305 (377)
T ss_dssp CCBCHHHHTTSCTTCEEEEGGGGTTC----------------------SBTTCCCBCSSSCEEEETTEEEECBTTGGGGS
T ss_pred ceecHHHHhcCCCCcEEEEEecCCCC----------------------ccccccCCCCCCCEEEECCEEEEecCCcchhh
Confidence 999999999999999999999 332 6887 8877788999999998 999999998
Q ss_pred HH
Q 046427 337 TE 338 (595)
Q Consensus 337 ~e 338 (595)
..
T Consensus 306 ~~ 307 (377)
T 2vhw_A 306 PK 307 (377)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 42
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.78 E-value=7.2e-19 Score=187.09 Aligned_cols=276 Identities=17% Similarity=0.186 Sum_probs=176.5
Q ss_pred CChhHHHHhhcCC-cEEec------CCCCHhHHhh----------hcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcc
Q 046427 62 LGEAGLDVLKNFA-NVDCS------YNLSPEELCT----------KISLCDALIVRSGTKVTREVFESSAGRLKVVGRAG 124 (595)
Q Consensus 62 ~~~~~~~~l~~~~-~v~~~------~~~~~~el~~----------~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g 124 (595)
+.++..+.|.+.+ +|.+. ..++.+++.+ .+ ++|+|+ ....++.++ ++.+++++++|+...
T Consensus 18 l~P~~v~~L~~~g~~v~ve~~ag~~~~~~d~~y~~aga~i~~~~~~~-~ad~il-~vk~p~~~~-~~~l~~~~~~~~~~~ 94 (369)
T 2eez_A 18 LTPGGVESLVRRGHTVLVERGAGEGSGLSDAEYARAGAELVGREEAW-GAEMVV-KVKEPLPEE-YGFLREGLILFTYLH 94 (369)
T ss_dssp SCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECHHHHT-TSSEEE-CSSCCCGGG-GGGCCTTCEEEECCC
T ss_pred cCHHHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEeccccee-cCCEEE-EECCCCHHH-HhhcCCCcEEEEEec
Confidence 5667777776553 55442 3456666654 45 899866 455566444 666557899999999
Q ss_pred ccccccChhhHHhCCceEE---eCCCC-Cc----hHHHHHHH--HHHHHHHHchHHHHHHHHcCcccccccceeeecCCE
Q 046427 125 VGIDNVDLSAATEHGCLVV---NAPTA-NT----IAAAEHGI--ALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKT 194 (595)
Q Consensus 125 ~G~d~iD~~aa~~~gI~V~---n~p~~-~~----~~vAE~~l--~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gkt 194 (595)
.++|..+++++.++||.+. +.+.. .. .+.++.+- +.++++ +.+..... ..+.|... ..++.+++
T Consensus 95 ~~~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~~a~-~~l~~~~~--g~~~~~~~---~~~l~~~~ 168 (369)
T 2eez_A 95 LAADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQVGA-QFLEKPKG--GRGVLLGG---VPGVAPAS 168 (369)
T ss_dssp GGGCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHHHHH-HHTSGGGT--SCCCCTTC---BTBBCCCE
T ss_pred ccCCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHHHHH-HHHHHhcC--CCceecCC---CCCCCCCE
Confidence 9999999999999999998 55542 11 33444443 444333 22322210 11123221 13689999
Q ss_pred EEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHH-cCCc-------ccCHHHhccccCEEEEeCCCCh-hccccc
Q 046427 195 LAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARA-TGVG-------LVSFEEAISTADFISLHMPLTP-ATSKMF 264 (595)
Q Consensus 195 vGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-~g~~-------~~~l~ell~~aD~V~l~~Plt~-~t~~li 264 (595)
++|+|.|.||+.+|+.++++|++|+++|++... +.+.+ .|.. ..+++++++++|+|+.|+|... .+..++
T Consensus 169 V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~~li 248 (369)
T 2eez_A 169 VVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKAPKLV 248 (369)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-------CCS
T ss_pred EEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCccccchhH
Confidence 999999999999999999999999999987632 33333 4442 2357788999999999999765 577888
Q ss_pred cHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEE---------EcCCCCCC
Q 046427 265 NDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVT---------VTPHLGAS 335 (595)
Q Consensus 265 ~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvi---------lTPHi~~~ 335 (595)
.++.++.||+|.+|||++-. .| |+ +|++ ||.+.++|++..+++. .|||.++.
T Consensus 249 ~~~~l~~mk~gg~iV~v~~~-------------~g---g~-~d~~--ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~ 309 (369)
T 2eez_A 249 TRDMLSLMKEGAVIVDVAVD-------------QG---GC-VETI--RPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTF 309 (369)
T ss_dssp CHHHHTTSCTTCEEEECC--------------------------------------CEETTEEEECCSCSGGGSHHHHHH
T ss_pred HHHHHHhhcCCCEEEEEecC-------------CC---CC-CCcc--cCCCCCCCEEEECCEEEEeeCCcchhcHHHHHH
Confidence 99999999999999999821 12 44 8988 6666678899899998 78998774
Q ss_pred --cHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 046427 336 --TTEAQEGVAIEIAEAVIGALKGELAATAVN 365 (595)
Q Consensus 336 --t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn 365 (595)
+.+....+...+.+++..++.+....+.+|
T Consensus 310 ~~~~~~~~~l~~l~~~g~~~~~~~~~l~~~~~ 341 (369)
T 2eez_A 310 ALTNQTLPYVLKLAEKGLDALLEDAALLKGLN 341 (369)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHSCHHHHTTEE
T ss_pred HHHHHHHHHHHHHHhcChhhhhcChHHhcCEE
Confidence 456666777777777766666665555554
No 43
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.78 E-value=3.8e-20 Score=199.22 Aligned_cols=155 Identities=19% Similarity=0.350 Sum_probs=125.9
Q ss_pred eee-ecCCEEEEEeCChHHHHHHHHHhc-CCCEEEEE-CCCCcHHHHHHcCCcccCHHHhccccCE-EEEeCCCChhccc
Q 046427 187 GVS-LVGKTLAVMGFGKVGTEVARRAKG-LGMNVIAH-DPYAQADRARATGVGLVSFEEAISTADF-ISLHMPLTPATSK 262 (595)
Q Consensus 187 g~~-l~gktvGIIGlG~IG~~vA~~l~~-~G~~V~~~-d~~~~~~~a~~~g~~~~~l~ell~~aD~-V~l~~Plt~~t~~ 262 (595)
|.+ |+|||+||+|+|+||+.+|+++++ |||+|++| |++... .+...++++++++.+|. .++ +|+ ++|++
T Consensus 206 G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~-----~~~~gvdl~~L~~~~d~~~~l-~~l-~~t~~ 278 (419)
T 1gtm_A 206 GWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGI-----YNPDGLNADEVLKWKNEHGSV-KDF-PGATN 278 (419)
T ss_dssp TCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEE-----EEEEEECHHHHHHHHHHHSSS-TTC-TTSEE
T ss_pred CCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCccc-----cCccCCCHHHHHHHHHhcCEe-ecC-ccCee
Confidence 557 999999999999999999999999 99999999 554310 11123467777775554 333 576 67888
Q ss_pred cccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCC-cccccCCcEEEcCCC----C----
Q 046427 263 MFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKD-SKLVLHENVTVTPHL----G---- 333 (595)
Q Consensus 263 li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~-~~L~~~~nvilTPHi----~---- 333 (595)
++.+.|..||+ .+||||+||.+||+++ +++|+.++|++++ +||++.+ ++||..+|+++|||+ |
T Consensus 279 -i~~~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~itPhiaaNaGGvt~ 350 (419)
T 1gtm_A 279 -ITNEELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGILQIPDFLCNAGGVTV 350 (419)
T ss_dssp -ECHHHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTCEEECHHHHTTHHHHH
T ss_pred -eCHHHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCEEEECchhhhCCccee
Confidence 88889999998 5999999999999999 6999999998887 8887543 689999999999999 6
Q ss_pred -------------CCcHHHHHHHHHHHHHHHHHHHc
Q 046427 334 -------------ASTTEAQEGVAIEIAEAVIGALK 356 (595)
Q Consensus 334 -------------~~t~ea~~~~~~~~~~~l~~~l~ 356 (595)
|.++|.+.++...+.+++.++++
T Consensus 351 s~~E~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~~ 386 (419)
T 1gtm_A 351 SYFEWVQNITGYYWTIEEVRERLDKKMTKAFYDVYN 386 (419)
T ss_dssp HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeehhhhcccccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 66788888888877788888773
No 44
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.77 E-value=1.6e-18 Score=186.29 Aligned_cols=220 Identities=15% Similarity=0.185 Sum_probs=156.6
Q ss_pred CChhHHHHhhcCC-cEEec------CCCCHhHHhhh---------cCCceEEEEcCCCCCCHHHHhccCCCceEEEEccc
Q 046427 62 LGEAGLDVLKNFA-NVDCS------YNLSPEELCTK---------ISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGV 125 (595)
Q Consensus 62 ~~~~~~~~l~~~~-~v~~~------~~~~~~el~~~---------i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~ 125 (595)
+.++....|...+ +|.+. ..++.++..+. +-++|+++. ... .+++.++.+++++++|+..+.
T Consensus 25 ltP~~v~~L~~~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~~~~~~adiil~-vk~-p~~~~i~~l~~~~~li~~~~~ 102 (401)
T 1x13_A 25 ATPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNSVWQSEIILK-VNA-PLDDEIALLNPGTTLVSFIWP 102 (401)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECGGGGGSSSEEEC-SSC-CCHHHHTTCCTTCEEEECCCG
T ss_pred CCHHHHHHHHHCCCEEEEEECCCcccCCChHHHHHCCCEEeccHHHhcCCeEEE-eCC-CCHHHHHHhcCCCcEEEEecC
Confidence 4556666665443 45442 24555555432 333898774 333 357778877679999999999
Q ss_pred cccccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHH--HHHHHcCcccccc-ccee-----eecCCEEEE
Q 046427 126 GIDNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQA--DASVKAGKWQRNK-YVGV-----SLVGKTLAV 197 (595)
Q Consensus 126 G~d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~--~~~~~~g~W~~~~-~~g~-----~l~gktvGI 197 (595)
|+|++|++++.++||.|. +.++|+|++.++.|.+++.+... +..++.+.|.... +.+. ++.|++|+|
T Consensus 103 ~~d~~~~~al~~~gI~v~-----~~e~v~~~~~a~~l~~l~~~a~~ag~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~V 177 (401)
T 1x13_A 103 AQNPELMQKLAERNVTVM-----AMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMV 177 (401)
T ss_dssp GGCHHHHHHHHHTTCEEE-----EGGGCCCSGGGGGGCHHHHHHHHHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEE
T ss_pred CCCHHHHHHHHHCCCEEE-----EeehhhhhhhhcccchHHHHHHHHHHHHHHHHHHhcccccCCceeeccCcCCCEEEE
Confidence 999999999999999996 45666777666643333332221 3344444432111 1111 688999999
Q ss_pred EeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCccc----------------------------CHHHhccccC
Q 046427 198 MGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLV----------------------------SFEEAISTAD 248 (595)
Q Consensus 198 IGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~----------------------------~l~ell~~aD 248 (595)
+|+|.||..+++.++++|++|+++|++.. .+.+.+.|...+ +++++++++|
T Consensus 178 iGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~aD 257 (401)
T 1x13_A 178 IGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKEVD 257 (401)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHHCS
T ss_pred ECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999873 355566776543 2678889999
Q ss_pred EEEEe--CCCChhccccccHHHHhcCCCceEEEecc--CCchhcH
Q 046427 249 FISLH--MPLTPATSKMFNDEAFFKMKKGVRIVNVA--RGGVVDE 289 (595)
Q Consensus 249 ~V~l~--~Plt~~t~~li~~~~l~~mk~gailiN~a--rg~~vd~ 289 (595)
+|+.| +|.. .+..+++++.++.||+|++|||++ ||+.+++
T Consensus 258 vVI~~~~~pg~-~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 258 IIVTTALIPGK-PAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp EEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred EEEECCccCCC-CCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 99999 5532 366889999999999999999999 8887654
No 45
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.74 E-value=2.3e-17 Score=176.32 Aligned_cols=220 Identities=16% Similarity=0.210 Sum_probs=153.5
Q ss_pred CChhHHHHhhcCC-cEEec------CCCCHhHHh-----------hhcCCceEEEEcCCCCC----CHHHHhccCCCceE
Q 046427 62 LGEAGLDVLKNFA-NVDCS------YNLSPEELC-----------TKISLCDALIVRSGTKV----TREVFESSAGRLKV 119 (595)
Q Consensus 62 ~~~~~~~~l~~~~-~v~~~------~~~~~~el~-----------~~i~~~d~li~~~~~~i----~~~~l~~~~~~Lk~ 119 (595)
+.++....|.+.+ +|.+. ..++.++.. +.++++|+++.. ..++ +++.++.+++++++
T Consensus 18 l~P~~v~~L~~~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~~adiil~v-~~p~~~~~~~~~i~~l~~~~~~ 96 (384)
T 1l7d_A 18 ISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKV-QRPMTAEEGTDEVALIKEGAVL 96 (384)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHSSCSEEEEE-ECCCCGGGSCCGGGGSCTTCEE
T ss_pred CCHHHHHHHHhCCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhhcCCCEEEEe-cCcccccCCHHHHHhhccCCEE
Confidence 4555666665543 44431 234555544 356789998865 3466 78888888768999
Q ss_pred EEEccccccccChhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCccccccc-----ce-eeecCC
Q 046427 120 VGRAGVGIDNVDLSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKY-----VG-VSLVGK 193 (595)
Q Consensus 120 I~~~g~G~d~iD~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~-----~g-~~l~gk 193 (595)
|+....+.|+.|++++.++||.++|. ....+.+++..+. +|+..+.+ ..+..+..+.|.-..+ .+ .++.|+
T Consensus 97 i~~~~~~~~~~~~~~~~~~gi~~~~~-e~~~~~~~~~~l~-~l~~~a~~-ag~~av~~~~~~~~~~~~~~~~~~~~l~g~ 173 (384)
T 1l7d_A 97 MCHLGALTNRPVVEALTKRKITAYAM-ELMPRISRAQSMD-ILSSQSNL-AGYRAVIDGAYEFARAFPMMMTAAGTVPPA 173 (384)
T ss_dssp EEECCGGGCHHHHHHHHHTTCEEEEG-GGCCCSGGGGGGC-HHHHHHHH-HHHHHHHHHHHHCSSCSSCEEETTEEECCC
T ss_pred EEEecccCCHHHHHHHHHCCCEEEEe-ccccccccccccc-hhhHHHHH-HHHHHHHHHHHHhhhcccchhccCCCCCCC
Confidence 99999999999999999999999984 2222222233333 22223332 2333444444431111 11 378999
Q ss_pred EEEEEeCChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc---C---------------------------HHH
Q 046427 194 TLAVMGFGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV---S---------------------------FEE 242 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~---~---------------------------l~e 242 (595)
+|+|+|+|.||+.+++.++++|++|+++|++. ..+.+.++|...+ . +++
T Consensus 174 ~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~ 253 (384)
T 1l7d_A 174 RVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLK 253 (384)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHH
Confidence 99999999999999999999999999999986 4455666775433 1 778
Q ss_pred hccccCEEEEeC--CCChhccccccHHHHhcCCCceEEEecc--CCch
Q 046427 243 AISTADFISLHM--PLTPATSKMFNDEAFFKMKKGVRIVNVA--RGGV 286 (595)
Q Consensus 243 ll~~aD~V~l~~--Plt~~t~~li~~~~l~~mk~gailiN~a--rg~~ 286 (595)
+++++|+|+.|+ |..+ +..+++++.++.||+|++|||++ ||+.
T Consensus 254 ~~~~aDvVi~~~~~pg~~-~~~li~~~~l~~mk~g~vivdva~~~gg~ 300 (384)
T 1l7d_A 254 ELVKTDIAITTALIPGKP-APVLITEEMVTKMKPGSVIIDLAVEAGGN 300 (384)
T ss_dssp HHTTCSEEEECCCCTTSC-CCCCSCHHHHTTSCTTCEEEETTGGGTCS
T ss_pred HhCCCCEEEECCccCCCC-CCeeeCHHHHhcCCCCCEEEEEecCCCCC
Confidence 889999999887 4332 45788999999999999999999 7764
No 46
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.72 E-value=2.1e-17 Score=177.20 Aligned_cols=155 Identities=19% Similarity=0.263 Sum_probs=123.3
Q ss_pred ccccccccC-hhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCC
Q 046427 123 AGVGIDNVD-LSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFG 201 (595)
Q Consensus 123 ~g~G~d~iD-~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG 201 (595)
.++|+.... +.++.+.+|+|+|++...+.+..+...+..-++.+.+.. ..+.++.||++||+|+|
T Consensus 155 TttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r--------------atg~~L~GktVgIiG~G 220 (436)
T 3h9u_A 155 TTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR--------------ATDVMIAGKTACVCGYG 220 (436)
T ss_dssp SHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH--------------HHCCCCTTCEEEEECCS
T ss_pred cCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHHHHH--------------hcCCcccCCEEEEEeeC
Confidence 567776543 455678999999998766666555444433333332211 13567999999999999
Q ss_pred hHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEe
Q 046427 202 KVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVN 280 (595)
Q Consensus 202 ~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN 280 (595)
.||+.+|+++++||++|++||+++. ...+...|++..++++++++||+|++ ++.|.++|+++.|+.||+|++|||
T Consensus 221 ~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVil----t~gt~~iI~~e~l~~MK~gAIVIN 296 (436)
T 3h9u_A 221 DVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVT----TTGNDDIITSEHFPRMRDDAIVCN 296 (436)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEE----CSSCSCSBCTTTGGGCCTTEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEE----CCCCcCccCHHHHhhcCCCcEEEE
Confidence 9999999999999999999999863 34466778888899999999999997 346899999999999999999999
Q ss_pred ccCCch-hcHHHHHHH
Q 046427 281 VARGGV-VDEEALVRA 295 (595)
Q Consensus 281 ~arg~~-vd~~aL~~a 295 (595)
+|||.+ ||.++|.+.
T Consensus 297 vgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 297 IGHFDTEIQVAWLKAN 312 (436)
T ss_dssp CSSSGGGBCHHHHHHH
T ss_pred eCCCCCccCHHHHHhh
Confidence 999997 899988764
No 47
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.68 E-value=1.2e-16 Score=171.00 Aligned_cols=154 Identities=20% Similarity=0.221 Sum_probs=116.8
Q ss_pred ccccccccC-hhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCC
Q 046427 123 AGVGIDNVD-LSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFG 201 (595)
Q Consensus 123 ~g~G~d~iD-~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG 201 (595)
.++|+-..- ....-...++|.|+.+..+. +-+-....+.+.+..+... ..+.++.|||+||+|+|
T Consensus 191 TtTGv~rL~~m~~~g~L~~PvinVnds~tK----~~fDn~yG~~eslvdgI~R----------atg~~L~GKTVgVIG~G 256 (464)
T 3n58_A 191 TTTGVNRLYQLQKKGLLPFPAINVNDSVTK----SKFDNKYGCKESLVDGIRR----------GTDVMMAGKVAVVCGYG 256 (464)
T ss_dssp SHHHHHHHHHHHHHTCCCSCEEECTTSHHH----HTTHHHHHHHHHHHHHHHH----------HHCCCCTTCEEEEECCS
T ss_pred cccchHHHHHHHHcCCCCCCEEeeccHhhh----hhhhhhhcchHHHHHHHHH----------hcCCcccCCEEEEECcC
Confidence 567776542 23334567888888764444 4333333333333222211 13568999999999999
Q ss_pred hHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEe
Q 046427 202 KVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVN 280 (595)
Q Consensus 202 ~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN 280 (595)
.||+.+|+++++|||+|+++|+++. ...+...|++.+++++++++||+|+++. .|+++|+++.|+.||+|++|||
T Consensus 257 ~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~at----gt~~lI~~e~l~~MK~GAILIN 332 (464)
T 3n58_A 257 DVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTT----GNKDVITIDHMRKMKDMCIVGN 332 (464)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEECC----SSSSSBCHHHHHHSCTTEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEECC----CCccccCHHHHhcCCCCeEEEE
Confidence 9999999999999999999988652 3345567888889999999999999865 4789999999999999999999
Q ss_pred ccCCch-hcHHHHHH
Q 046427 281 VARGGV-VDEEALVR 294 (595)
Q Consensus 281 ~arg~~-vd~~aL~~ 294 (595)
+|||.+ +|.++|.+
T Consensus 333 vGRgdvEID~~aL~~ 347 (464)
T 3n58_A 333 IGHFDNEIQVAALRN 347 (464)
T ss_dssp CSSSTTTBTCGGGTT
T ss_pred cCCCCcccCHHHHHh
Confidence 999998 89888864
No 48
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.67 E-value=2.3e-17 Score=171.72 Aligned_cols=242 Identities=15% Similarity=0.102 Sum_probs=174.5
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCC--EEEEECCCC-cHHHHHHcCCc---ccCHHH-hccccCEEEEeCCCChhcc
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGM--NVIAHDPYA-QADRARATGVG---LVSFEE-AISTADFISLHMPLTPATS 261 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~-~~~~a~~~g~~---~~~l~e-ll~~aD~V~l~~Plt~~t~ 261 (595)
++.-++|||||+|.||+++|+.++..|+ +|++||++. ..+.+.+.|+. ..++++ ++++||+|++|+|.. .+.
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~-~~~ 108 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFR 108 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGG-GHH
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHH-HHH
Confidence 3445899999999999999999999999 999999986 34556677762 247888 899999999999954 355
Q ss_pred ccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCC---CCCCCcccccCCcEEEcCCCCCCcHH
Q 046427 262 KMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTEE---PPAKDSKLVLHENVTVTPHLGASTTE 338 (595)
Q Consensus 262 ~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~E---P~~~~~~L~~~~nvilTPHi~~~t~e 338 (595)
.++ ++....++++++|+|++..+....+++.+.+.. ++.+. -=++..| |..+...||....+++||+-+.. .+
T Consensus 109 ~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~-~~v~~-hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~-~~ 184 (314)
T 3ggo_A 109 EIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGK-RFVGG-HPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTD-KK 184 (314)
T ss_dssp HHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-GEECE-EECCCCCCCSGGGCCTTTTTTCEEEECCCTTSC-HH
T ss_pred HHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC-CEEec-CcccCCcccchhhhhhhhhcCCEEEEEeCCCCC-HH
Confidence 555 445667999999999998776556666666654 44221 1234333 33456689999999999984433 33
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCccccCCCCChhhhhccc--chhHHHHHHHHHH---------HHHhcCCCCceEEEEE
Q 046427 339 AQEGVAIEIAEAVIGALKGELAATAVNAPMVPAEVISELA--PFVTLAEKLGGLA---------VQLVAGGSGVKSVKVS 407 (595)
Q Consensus 339 a~~~~~~~~~~~l~~~l~g~~~~~~vn~~~~~~~~~~~~~--p~~~la~rlG~l~---------~qL~~g~~~~k~v~i~ 407 (595)
..+.+.++++.-+....+..+..++..+..++ ||+.....+..+. .+++++ +|+++++.
T Consensus 185 --------~~~~v~~l~~~~G~~v~~~~~~~hD~~~a~~s~lph~~a~~l~~~~~~~~~~~~~~~~~a~~--~frd~tRi 254 (314)
T 3ggo_A 185 --------RLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGG--GFKDFTRI 254 (314)
T ss_dssp --------HHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSCCGGGCCTT--TTTTHHHH
T ss_pred --------HHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHhhccc--cHHHHHHH
Confidence 33455555555555555566778888888777 8775444444333 245666 89999999
Q ss_pred EeecCCCCCcccccchHHHHHhhcccccccccccccHHH
Q 046427 408 YASARGPDDLDTRLLRAMITKGIIEPISSVFVNLVNADF 446 (595)
Q Consensus 408 ~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~~nA~~ 446 (595)
+.+++. +|.+....|+..+...|+.+.++...++++.+
T Consensus 255 a~~~p~-~w~di~~~N~~~~~~~l~~~~~~l~~l~~~l~ 292 (314)
T 3ggo_A 255 AKSDPI-MWRDIFLENKENVMKAIEGFEKSLNHLKELIV 292 (314)
T ss_dssp TTSCHH-HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 99999999999877778777765556666554
No 49
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.66 E-value=8.3e-18 Score=181.01 Aligned_cols=210 Identities=16% Similarity=0.160 Sum_probs=163.5
Q ss_pred CCceEEEEccccccccChhhHH-----hCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCccccc----cc
Q 046427 115 GRLKVVGRAGVGIDNVDLSAAT-----EHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRN----KY 185 (595)
Q Consensus 115 ~~Lk~I~~~g~G~d~iD~~aa~-----~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~----~~ 185 (595)
+.+++|.+.|+|+|++++.++. ++++.++|.+|+ ..+++++.+.+++.+.|++...... ..+.|.-. ..
T Consensus 80 ~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~~-~~~~~s~a~~av~~ 157 (404)
T 1gpj_A 80 EAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETRI-SEGAVSIGSAAVEL 157 (404)
T ss_dssp HHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSST-TCSCCSHHHHHHHH
T ss_pred hHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhhh-cCCCccHHHHHHHH
Confidence 3688899999999999999998 899999999988 5789999999999999998766433 34556321 00
Q ss_pred ce---eeecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcH--HHHHHcCCcc---cCHHHhccccCEEEEeCCC
Q 046427 186 VG---VSLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQA--DRARATGVGL---VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 186 ~g---~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~--~~a~~~g~~~---~~l~ell~~aD~V~l~~Pl 256 (595)
.. .++.|++++|+|+|.||+.+++.++.+|+ +|+++|++... +.+.+.|... .++.++++++|+|+.|+|.
T Consensus 158 a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~ 237 (404)
T 1gpj_A 158 AERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAA 237 (404)
T ss_dssp HHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSS
T ss_pred HHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCC
Confidence 01 14789999999999999999999999999 99999997633 3455667643 3677888999999999874
Q ss_pred ChhccccccHHHHhc--CC----CceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEE--
Q 046427 257 TPATSKMFNDEAFFK--MK----KGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTV-- 328 (595)
Q Consensus 257 t~~t~~li~~~~l~~--mk----~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvil-- 328 (595)
+..+++.+.+.. || ++.+++|++ +|.+.+++++++||+++
T Consensus 238 ---~~~~~~~~~l~~~~lk~r~~~~~v~vdia-----------------------------~P~~i~~~l~~l~~v~l~d 285 (404)
T 1gpj_A 238 ---PHPVIHVDDVREALRKRDRRSPILIIDIA-----------------------------NPRDVEEGVENIEDVEVRT 285 (404)
T ss_dssp ---SSCCBCHHHHHHHHHHCSSCCCEEEEECC-----------------------------SSCSBCTTGGGSTTEEEEE
T ss_pred ---CCceecHHHHHHHHHhccCCCCEEEEEcc-----------------------------CCCCCCccccccCCeEEEe
Confidence 456677777776 42 556777665 36555789999999999
Q ss_pred cCCCCCCcHHHHH----------HHHHHHHHHHHHHHcCC
Q 046427 329 TPHLGASTTEAQE----------GVAIEIAEAVIGALKGE 358 (595)
Q Consensus 329 TPHi~~~t~ea~~----------~~~~~~~~~l~~~l~g~ 358 (595)
|||+++.+.+++. .+..+.++++..|+.+.
T Consensus 286 ~d~l~~~~~~~~~~r~~~~~~~~~li~q~~~~f~~w~~~~ 325 (404)
T 1gpj_A 286 IDDLRVIARENLERRRKEIPKVEKLIEEELSTVEEELEKL 325 (404)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999888765 45556677777787654
No 50
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.61 E-value=2.4e-15 Score=160.96 Aligned_cols=152 Identities=20% Similarity=0.263 Sum_probs=114.4
Q ss_pred ccccccccC-hhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCC
Q 046427 123 AGVGIDNVD-LSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFG 201 (595)
Q Consensus 123 ~g~G~d~iD-~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG 201 (595)
.++|+-.+- ....-+..++|.|+.+..+.+--+...+.--++...+.+ ..+..+.||+++|+|+|
T Consensus 164 TttGv~rl~~~~~~g~L~~Pvi~vnds~tK~~fDn~yGt~~s~~~gi~r--------------at~~~L~GktV~ViG~G 229 (435)
T 3gvp_A 164 SVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDGLKR--------------TTDMMFGGKQVVVCGYG 229 (435)
T ss_dssp CHHHHHHHTCC--CCCCCSCEEECTTCHHHHHHHTHHHHHHHHHHHHHH--------------HHCCCCTTCEEEEECCS
T ss_pred cchhHHHHHHHHHcCCCCCCEEEecchhhhhhhhhhhhhHHHHHHHHHH--------------hhCceecCCEEEEEeeC
Confidence 456665542 233446789999998876665544322222222111111 13567999999999999
Q ss_pred hHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEe
Q 046427 202 KVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVN 280 (595)
Q Consensus 202 ~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN 280 (595)
.||+.+|+++++||++|+++|+++ ....+...|++..++++++++||+|++| +.|.++|+++.|+.||+|++|||
T Consensus 230 ~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~a----tgt~~lI~~e~l~~MK~gailIN 305 (435)
T 3gvp_A 230 EVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITC----TGNKNVVTREHLDRMKNSCIVCN 305 (435)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEEC----SSCSCSBCHHHHHHSCTTEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEEC----CCCcccCCHHHHHhcCCCcEEEE
Confidence 999999999999999999999876 2344667788888999999999999995 36889999999999999999999
Q ss_pred ccCCch-hcHHHH
Q 046427 281 VARGGV-VDEEAL 292 (595)
Q Consensus 281 ~arg~~-vd~~aL 292 (595)
+|||.. +|.++|
T Consensus 306 vgrg~~EId~~~L 318 (435)
T 3gvp_A 306 MGHSNTEIDVASL 318 (435)
T ss_dssp CSSTTTTBTGGGG
T ss_pred ecCCCccCCHHHH
Confidence 999988 566665
No 51
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.60 E-value=3.6e-17 Score=172.03 Aligned_cols=247 Identities=12% Similarity=0.050 Sum_probs=171.2
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCcc-cCHHHhccc----cCEEEEeCCCChhcccccc
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGL-VSFEEAIST----ADFISLHMPLTPATSKMFN 265 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~-~~l~ell~~----aD~V~l~~Plt~~t~~li~ 265 (595)
-++|||||+|.||+++|+.++..|++|++||++. ..+.+.+.|+.. .++++++++ ||+|++|+|. ..+..++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl~ 86 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLLD 86 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHHH
Confidence 3579999999999999999999999999999986 345567788754 478888775 6999999994 45676663
Q ss_pred HHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCC---CCCCCcccccCCcEEEcCCCCCCcHHHHHH
Q 046427 266 DEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTEE---PPAKDSKLVLHENVTVTPHLGASTTEAQEG 342 (595)
Q Consensus 266 ~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~E---P~~~~~~L~~~~nvilTPHi~~~t~ea~~~ 342 (595)
.+..++++++|+|++..+....+++.+.+...++.+. -=+++.| |..++..||+..++++||+-+.. .+....
T Consensus 87 --~l~~~~~~~iv~Dv~Svk~~i~~~~~~~~~~~~~v~~-HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~-~e~~~~ 162 (341)
T 3ktd_A 87 --AVHTHAPNNGFTDVVSVKTAVYDAVKARNMQHRYVGS-HPMAGTANSGWSASMDGLFKRAVWVVTFDQLFD-GTDINS 162 (341)
T ss_dssp --HHHHHCTTCCEEECCSCSHHHHHHHHHTTCGGGEECE-EECCSCC-CCGGGCCSSTTTTCEEEECCGGGTS-SCCCCH
T ss_pred --HHHccCCCCEEEEcCCCChHHHHHHHHhCCCCcEecC-CccccccccchhhhhhHHhcCCeEEEEeCCCCC-hhhhcc
Confidence 3444699999999997765444555554432222221 1133333 22356689999999999974332 120000
Q ss_pred HHHHHHHHHHHHHcCCCCCccccCCCCChhhhhccc--chhHHHHHHHH------HHHHHhcCCCCceEEEEEEeecCCC
Q 046427 343 VAIEIAEAVIGALKGELAATAVNAPMVPAEVISELA--PFVTLAEKLGG------LAVQLVAGGSGVKSVKVSYASARGP 414 (595)
Q Consensus 343 ~~~~~~~~l~~~l~g~~~~~~vn~~~~~~~~~~~~~--p~~~la~rlG~------l~~qL~~g~~~~k~v~i~~~Gs~a~ 414 (595)
-+....+.+.++++.-+.......+..|+..+..++ ||+.....+.. .+.+|+++ +|+++++.+.+++.
T Consensus 163 ~~~~~~~~v~~l~~~~Ga~v~~~~~~~HD~~~A~vshlPh~ia~aL~~~~~~~~~~~~~laa~--gfrd~tRia~s~p~- 239 (341)
T 3ktd_A 163 TWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAETLAIVGDNGGALSLSLAAG--SYRDSTRVAGTDPG- 239 (341)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTHHHHHHHCCH--HHHHHTGGGGSCHH-
T ss_pred chHHHHHHHHHHHHHcCCEEEEeCHHHHHHHHHHHhHHHHHHHHHHHHHhhcchHHHHHHccc--cHHHHHHHhcCCHH-
Confidence 112244566666666555566667888888888888 88755544332 34467777 89999999999998
Q ss_pred CCcccccchHHHHHhhcccccccccccccHHH
Q 046427 415 DDLDTRLLRAMITKGIIEPISSVFVNLVNADF 446 (595)
Q Consensus 415 ~~~~~~~~~~a~l~GlL~~~~~~~vn~~nA~~ 446 (595)
+|.+....|+..+...|+.+.++...++++++
T Consensus 240 lw~di~~~N~~~~~~~l~~~~~~L~~l~~~l~ 271 (341)
T 3ktd_A 240 LVRAMCESNAGPLVKALDEALAILHEAREGLT 271 (341)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999997777777776665455555554
No 52
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.53 E-value=6.3e-15 Score=150.08 Aligned_cols=219 Identities=15% Similarity=0.128 Sum_probs=142.8
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCC--EEEEECCCC-cHHHHHHcCCc---ccCHHHhcc-ccCEEEEeCCCChhcccccc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGM--NVIAHDPYA-QADRARATGVG---LVSFEEAIS-TADFISLHMPLTPATSKMFN 265 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~-~~~~a~~~g~~---~~~l~ell~-~aD~V~l~~Plt~~t~~li~ 265 (595)
++|||||+|.||+.+|+.++..|+ +|++||++. ..+.+.+.|+. ..+++++++ +||+|++|+|.. .+..++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~ 80 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIAK 80 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHHH
Confidence 589999999999999999999998 999999976 33445566764 237889999 999999999954 5666664
Q ss_pred HHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCC---CCCCCcccccCCcEEEcCCCCCCcHHHHHH
Q 046427 266 DEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTEE---PPAKDSKLVLHENVTVTPHLGASTTEAQEG 342 (595)
Q Consensus 266 ~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~E---P~~~~~~L~~~~nvilTPHi~~~t~ea~~~ 342 (595)
+....++++++|+|+++++....+.+.+.+.++.+ + +.-++..| |..+.+.|+...+++++||.++. .+.
T Consensus 81 -~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v-~-~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~-~~~--- 153 (281)
T 2g5c_A 81 -KLSYILSEDATVTDQGSVKGKLVYDLENILGKRFV-G-GHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTD-KKR--- 153 (281)
T ss_dssp -HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEE-C-EEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSC-HHH---
T ss_pred -HHHhhCCCCcEEEECCCCcHHHHHHHHHhccccce-e-eccccCCccCChhhhhhHHhCCCCEEEecCCCCC-HHH---
Confidence 34566899999999999887667778888876422 1 12234333 33345678888889999997665 222
Q ss_pred HHHHHHHHHHHHHcCCCCCccccCCCCChhhhhccc--chh---HHHHHHHH------HHHHHhcCCCCceEEEEEEeec
Q 046427 343 VAIEIAEAVIGALKGELAATAVNAPMVPAEVISELA--PFV---TLAEKLGG------LAVQLVAGGSGVKSVKVSYASA 411 (595)
Q Consensus 343 ~~~~~~~~l~~~l~g~~~~~~vn~~~~~~~~~~~~~--p~~---~la~rlG~------l~~qL~~g~~~~k~v~i~~~Gs 411 (595)
.+.+.++++.-.....+..+..++..+.... |+. .+.+.++. .+..|+.+ ++++++....++
T Consensus 154 -----~~~v~~l~~~~g~~~~~~~~~~~d~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~r~~~~~ 226 (281)
T 2g5c_A 154 -----LKLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGG--GFKDFTRIAKSD 226 (281)
T ss_dssp -----HHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCBTTBCGGGCCTT--TGGGC---CCSC
T ss_pred -----HHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhhccc--cHHHHhHHhcCC
Confidence 2344455544443333444444444444443 443 23333332 23344555 788777777777
Q ss_pred CCCCCcccccchHHHH
Q 046427 412 RGPDDLDTRLLRAMIT 427 (595)
Q Consensus 412 ~a~~~~~~~~~~~a~l 427 (595)
+. +|.+...++...+
T Consensus 227 p~-~~~~~~~sn~~~~ 241 (281)
T 2g5c_A 227 PI-MWRDIFLENKENV 241 (281)
T ss_dssp HH-HHHHHHHHTHHHH
T ss_pred HH-HHHHHHHHCHHHH
Confidence 76 7777766666533
No 53
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.38 E-value=7.1e-14 Score=142.94 Aligned_cols=227 Identities=18% Similarity=0.144 Sum_probs=139.4
Q ss_pred CEEEEEeCChHHHHHHHHHhcC--CCEEEEECCCCc-HHHHHHcCCc---ccCHHHhccccCEEEEeCCCChhccccccH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL--GMNVIAHDPYAQ-ADRARATGVG---LVSFEEAISTADFISLHMPLTPATSKMFND 266 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~-~~~a~~~g~~---~~~l~ell~~aD~V~l~~Plt~~t~~li~~ 266 (595)
++|||||+|.||+.+|+.+... |++|++||++.. .+.+.+.|+. ..++++++++||+|++|+|.. ....++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~- 84 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIK-KTIDFIK- 84 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHH-HHHHHHH-
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHH-HHHHHHH-
Confidence 5899999999999999999865 789999998763 3444456652 247888999999999999954 3455553
Q ss_pred HHHhc-CCCceEEEeccCCchhcHHHHHHHHhc-C-CeeE----EEEecCCCCCCCCCcccccCCcEEEcCCCCCCcHHH
Q 046427 267 EAFFK-MKKGVRIVNVARGGVVDEEALVRALDS-G-IISQ----AALDVFTEEPPAKDSKLVLHENVTVTPHLGASTTEA 339 (595)
Q Consensus 267 ~~l~~-mk~gailiN~arg~~vd~~aL~~aL~~-g-~i~g----a~lDv~~~EP~~~~~~L~~~~nvilTPHi~~~t~ea 339 (595)
+.... ++++++++|++++.....+.+.+.+.+ + ++.+ ++.++. .|..+...|+..++++++||.++.. +
T Consensus 85 ~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~--g~~~a~~~l~~g~~~~~~~~~~~~~-~- 160 (290)
T 3b1f_A 85 ILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKS--GAVAANVNLFENAYYIFSPSCLTKP-N- 160 (290)
T ss_dssp HHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----C--CTTSCCTTTTTTSEEEEEECTTCCT-T-
T ss_pred HHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcc--hHHHhhHHHhCCCeEEEecCCCCCH-H-
Confidence 34556 899999999998877667788888775 2 2222 222322 2334456788888899999976542 2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCccccCCCCChhhhhccc---chh--HHHHHH---H---HHHHHHhcCCCCceEEEEEE
Q 046427 340 QEGVAIEIAEAVIGALKGELAATAVNAPMVPAEVISELA---PFV--TLAEKL---G---GLAVQLVAGGSGVKSVKVSY 408 (595)
Q Consensus 340 ~~~~~~~~~~~l~~~l~g~~~~~~vn~~~~~~~~~~~~~---p~~--~la~rl---G---~l~~qL~~g~~~~k~v~i~~ 408 (595)
..+.+.++++.-.....+..+..++..+..++ |.. .+.+.+ | ..+.+|+++ .+++++...
T Consensus 161 -------~~~~v~~l~~~~G~~~~~~~~~~~d~~~a~~s~~~~~~a~~~~~~~~~~g~~~~~~~~la~~--~~~~~~rla 231 (290)
T 3b1f_A 161 -------TIPALQDLLSGLHARYVEIDAAEHDCVTSQISHFPHIIASSLMKQAGDFSESHEMTKHFAAG--GFRDMTRIA 231 (290)
T ss_dssp -------HHHHHHHHTGGGCCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCTHHHHHCCH--HHHHTTGGG
T ss_pred -------HHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccchhhHHhhccc--cHHhhhhhh
Confidence 23456666665444333333333333322222 322 122222 2 233445554 566544444
Q ss_pred eecCCCCCcccccchHHHHHhhccccc
Q 046427 409 ASARGPDDLDTRLLRAMITKGIIEPIS 435 (595)
Q Consensus 409 ~Gs~a~~~~~~~~~~~a~l~GlL~~~~ 435 (595)
.+++. +|.+...++..-+.-.|+.+.
T Consensus 232 ~~~p~-~~~~~~~~n~~~~~~~l~~~~ 257 (290)
T 3b1f_A 232 ESEPG-MWTSILLTNQEAVLDRIENFK 257 (290)
T ss_dssp GSCHH-HHHHHHHHSHHHHHHHHHHHH
T ss_pred cCCHH-HHHHHHHHCHHHHHHHHHHHH
Confidence 55565 666666666654443343333
No 54
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.30 E-value=1.1e-13 Score=142.69 Aligned_cols=227 Identities=12% Similarity=0.077 Sum_probs=135.5
Q ss_pred HHHHHHHcCcccccccceeeecCCEEEEEe-CChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccC
Q 046427 170 QADASVKAGKWQRNKYVGVSLVGKTLAVMG-FGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTAD 248 (595)
Q Consensus 170 ~~~~~~~~g~W~~~~~~g~~l~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD 248 (595)
.+..+++...|.... ...++||||| +|.||+++|+.++..|++|.+||++.. .++.+++++||
T Consensus 4 ~~~~~~~~~~~~~~~-----~~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~-----------~~~~~~~~~aD 67 (298)
T 2pv7_A 4 ESYANENQFGFKTIN-----SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW-----------AVAESILANAD 67 (298)
T ss_dssp ---------CCCCSC-----TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG-----------GGHHHHHTTCS
T ss_pred hHHhhhhccCccccC-----CCCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc-----------cCHHHHhcCCC
Confidence 445566677786422 1356899999 999999999999999999999998653 14678899999
Q ss_pred EEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEE
Q 046427 249 FISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTV 328 (595)
Q Consensus 249 ~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvil 328 (595)
+|++|+|.. .+..++. +....++++++|+|+++.+....+++.+.+. .++.+. -=.++. ..+++...++++
T Consensus 68 vVilavp~~-~~~~vl~-~l~~~l~~~~iv~~~~svk~~~~~~~~~~~~-~~~v~~-hP~~g~-----~~~~~~g~~~~l 138 (298)
T 2pv7_A 68 VVIVSVPIN-LTLETIE-RLKPYLTENMLLADLTSVKREPLAKMLEVHT-GAVLGL-HPMFGA-----DIASMAKQVVVR 138 (298)
T ss_dssp EEEECSCGG-GHHHHHH-HHGGGCCTTSEEEECCSCCHHHHHHHHHHCS-SEEEEE-EECSCT-----TCSCCTTCEEEE
T ss_pred EEEEeCCHH-HHHHHHH-HHHhhcCCCcEEEECCCCCcHHHHHHHHhcC-CCEEee-CCCCCC-----CchhhcCCeEEE
Confidence 999999954 4777764 3455689999999999877655555555542 222111 011222 235777778999
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccccCCCCChhhhhccc--chh---HHHHHHH------HHHHHHhcC
Q 046427 329 TPHLGASTTEAQEGVAIEIAEAVIGALKGELAATAVNAPMVPAEVISELA--PFV---TLAEKLG------GLAVQLVAG 397 (595)
Q Consensus 329 TPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn~~~~~~~~~~~~~--p~~---~la~rlG------~l~~qL~~g 397 (595)
|||- +.+. .+.+.++++.-+....+..+..++..+..++ |++ .+++.+. ..+.+|+++
T Consensus 139 ~~~~---~~~~--------~~~v~~l~~~~G~~~~~~~~~~~d~~~a~~~~~p~~~a~~l~~~l~~~g~~~~~~~~la~~ 207 (298)
T 2pv7_A 139 CDGR---FPER--------YEWLLEQIQIWGAKIYQTNATEHDHNMTYIQALRHFSTFANGLHLSKQPINLANLLALSSP 207 (298)
T ss_dssp EEEE---CGGG--------THHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSCCHHHHHHTCCH
T ss_pred ecCC---CHHH--------HHHHHHHHHHcCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhcCH
Confidence 9973 2222 2344455544443334444555565665555 654 2333332 234556655
Q ss_pred CCCceE----EEEEEeecCCCCCcccccchHHHHHhhcccccc
Q 046427 398 GSGVKS----VKVSYASARGPDDLDTRLLRAMITKGIIEPISS 436 (595)
Q Consensus 398 ~~~~k~----v~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~ 436 (595)
.++. ++..+.+++. +|.+...++...+. .|..+..
T Consensus 208 --~f~~~~~~~~ria~~~p~-~~~di~~sn~~~~~-~l~~~~~ 246 (298)
T 2pv7_A 208 --IYRLELAMIGRLFAQDAE-LYADIIMDKSENLA-VIETLKQ 246 (298)
T ss_dssp --HHHHHHHHHHHHHTSCHH-HHHHHHC----CHH-HHHHHHH
T ss_pred --HHHHHHHHHHHHhcCCHH-HHHHHHHHCHHHHH-HHHHHHH
Confidence 6765 5555566676 77777666666555 4544433
No 55
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.28 E-value=5.6e-12 Score=130.27 Aligned_cols=114 Identities=19% Similarity=0.273 Sum_probs=97.4
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccH--HH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFND--EA 268 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~--~~ 268 (595)
|+|||||+|.||+.+|++|...|++|.+||++.. .+...+.|.... ++.|++++||+|++|+|..+..+.++.. ..
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 5899999999999999999999999999999873 455567787665 8999999999999999988888877743 36
Q ss_pred HhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEec
Q 046427 269 FFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDV 308 (595)
Q Consensus 269 l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv 308 (595)
+..+++|.++||++....-+...+.+.+++..+ ..+|.
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~--~~lDa 121 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGL--AMLDA 121 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTC--EEEEC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC--EEEec
Confidence 778999999999999999999999999998877 45663
No 56
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.24 E-value=8.7e-12 Score=128.96 Aligned_cols=114 Identities=18% Similarity=0.127 Sum_probs=95.0
Q ss_pred eeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCccc-CHHHhccccCEEEEeCCCChhcccccc
Q 046427 188 VSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFN 265 (595)
Q Consensus 188 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~ 265 (595)
.++..++|||||+|.||+.+|+++...|++|++||++.. .+...+.|+... ++++++++||+|++|+|....++.++.
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~ 84 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG 84 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc
Confidence 356678999999999999999999999999999999763 344555677654 899999999999999997666787775
Q ss_pred HHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 266 DEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 266 ~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
.+.+..+++|.++||+++....+.+.+.+.+.+..+
T Consensus 85 ~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~ 120 (306)
T 3l6d_A 85 MPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGG 120 (306)
T ss_dssp STTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTC
T ss_pred ccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 334566789999999999999889999988877555
No 57
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.24 E-value=8.4e-12 Score=129.87 Aligned_cols=130 Identities=17% Similarity=0.146 Sum_probs=93.5
Q ss_pred HHHHHcCcccccccc-----eeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCccc-CHHHhc
Q 046427 172 DASVKAGKWQRNKYV-----GVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLV-SFEEAI 244 (595)
Q Consensus 172 ~~~~~~g~W~~~~~~-----g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-~l~ell 244 (595)
++.++...|..+.+. ......++|||||+|.||+.+|+.+...|++|.+||++.. .+...+.|+... ++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~ 85 (320)
T 4dll_A 6 HHSSGVDLGTENLYFQSMTVESDPYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAA 85 (320)
T ss_dssp -----------------------CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHH
T ss_pred cccccccccccccceechhhccccCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHH
Confidence 345556666544221 1234567999999999999999999999999999999863 344455577654 899999
Q ss_pred cccCEEEEeCCCChhccccccH-HHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 245 STADFISLHMPLTPATSKMFND-EAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 245 ~~aD~V~l~~Plt~~t~~li~~-~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
++||+|++|+|....++.++.. ..+..++++.++||++++...+.+.+.+.+.+..+
T Consensus 86 ~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~ 143 (320)
T 4dll_A 86 RDADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGI 143 (320)
T ss_dssp TTCSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hcCCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 9999999999976667766642 45667999999999999999888899888887655
No 58
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.24 E-value=9.7e-12 Score=128.28 Aligned_cols=113 Identities=18% Similarity=0.197 Sum_probs=93.8
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccHHHHh
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFNDEAFF 270 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~ 270 (595)
++|||||+|.||..+|++|...|++|++||++.. .+...+.|...+ ++.|++++||+|++|+|..+..+..+....+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 5799999999999999999999999999998763 344456677654 89999999999999999877788888888888
Q ss_pred cCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEe
Q 046427 271 KMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALD 307 (595)
Q Consensus 271 ~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lD 307 (595)
.++++.++||++....-..+.+.+.+.+..+ ..+|
T Consensus 86 ~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~--~~ld 120 (297)
T 4gbj_A 86 KLGKDGVHVSMSTISPETSRQLAQVHEWYGA--HYVG 120 (297)
T ss_dssp HHCTTCEEEECSCCCHHHHHHHHHHHHHTTC--EEEE
T ss_pred hcCCCeEEEECCCCChHHHHHHHHHHHhcCC--ceec
Confidence 9999999999999999889999999888776 4455
No 59
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.22 E-value=5.7e-11 Score=124.97 Aligned_cols=108 Identities=27% Similarity=0.336 Sum_probs=93.3
Q ss_pred ee-eecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCcccCHHHhcc-ccCEEEEeCCCChhcccc
Q 046427 187 GV-SLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLVSFEEAIS-TADFISLHMPLTPATSKM 263 (595)
Q Consensus 187 g~-~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~~l~ell~-~aD~V~l~~Plt~~t~~l 263 (595)
|. +|.|||++|+|+|+||+.+|+++++||++|+++|++.. .+.+.+.+.+.+++++++. +||+++-| .+.++
T Consensus 169 G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~-----A~~~~ 243 (355)
T 1c1d_A 169 GLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPC-----AMGGV 243 (355)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEEC-----SCSCC
T ss_pred CCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHh-----HHHhh
Confidence 44 69999999999999999999999999999999998753 3344556777788899998 99999853 58899
Q ss_pred ccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 264 FNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 264 i~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
|+.+.++.|| ..+|+|++++++.++++ .++|+++.+
T Consensus 244 I~~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gI 279 (355)
T 1c1d_A 244 ITTEVARTLD-CSVVAGAANNVIADEAA-SDILHARGI 279 (355)
T ss_dssp BCHHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTC
T ss_pred cCHHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCE
Confidence 9999999998 68999999999998777 588888877
No 60
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.21 E-value=4.4e-11 Score=124.41 Aligned_cols=137 Identities=18% Similarity=0.128 Sum_probs=96.2
Q ss_pred HHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHHHHhcCC-CEEEEECCCCc--------HHHHHHcCCccc-CH
Q 046427 171 ADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLG-MNVIAHDPYAQ--------ADRARATGVGLV-SF 240 (595)
Q Consensus 171 ~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G-~~V~~~d~~~~--------~~~a~~~g~~~~-~l 240 (595)
++.+.+-+.|.++.++.. .-++|||||+|.||..+|+.+...| ++|++||++.. .+...+.|+ .. ++
T Consensus 5 ~~~~~~~~~~~~~~~~~~--M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~~~s~ 81 (317)
T 4ezb_A 5 HHHSSGVDLGTENLYFQS--MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-EPLDD 81 (317)
T ss_dssp ----------CCCHHHHT--SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-EEESS
T ss_pred cccccccccCcccCcccc--cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-CCCCH
Confidence 445556667877543221 2368999999999999999999999 99999998751 123345576 66 88
Q ss_pred HHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCC
Q 046427 241 EEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTEE 312 (595)
Q Consensus 241 ~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~E 312 (595)
++++++||+|++|+|....... + .+....++++.++||+++......+.+.+.+.+..+....--|++.+
T Consensus 82 ~e~~~~aDvVi~avp~~~~~~~-~-~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~ 151 (317)
T 4ezb_A 82 VAGIACADVVLSLVVGAATKAV-A-ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARV 151 (317)
T ss_dssp GGGGGGCSEEEECCCGGGHHHH-H-HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCS
T ss_pred HHHHhcCCEEEEecCCHHHHHH-H-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCc
Confidence 9999999999999996654443 3 55667899999999999999888889999888765432222356643
No 61
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.21 E-value=1.5e-10 Score=118.21 Aligned_cols=129 Identities=16% Similarity=0.131 Sum_probs=95.1
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHc-----------C--------------Cc-ccCHHHhcc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARAT-----------G--------------VG-LVSFEEAIS 245 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~-----------g--------------~~-~~~l~ell~ 245 (595)
++|+|||+|.||+.+|+.+...|++|++||++.. .+.+.+. | +. ..+++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 6899999999999999999999999999998763 2222221 1 12 237889999
Q ss_pred ccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcC-CeeEEEEecCCCCCCCCCcccccCC
Q 046427 246 TADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSG-IISQAALDVFTEEPPAKDSKLVLHE 324 (595)
Q Consensus 246 ~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g-~i~ga~lDv~~~EP~~~~~~L~~~~ 324 (595)
+||+|++|+|.+.+.+..+-++....+++++++++.+.+- ...++.+++... ++ .+++.|. |.+..+
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~--~~~~la~~~~~~~~~--ig~h~~~--------p~~~~~ 152 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTL--LPSDLVGYTGRGDKF--LALHFAN--------HVWVNN 152 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHHHHHSCGGGE--EEEEECS--------STTTSC
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCC--CHHHHHhhcCCCcce--EEEccCC--------CcccCc
Confidence 9999999999887677666666777899999999655443 456777777543 34 5566553 334567
Q ss_pred cEEEcCCCC
Q 046427 325 NVTVTPHLG 333 (595)
Q Consensus 325 nvilTPHi~ 333 (595)
.+.++||-.
T Consensus 153 lvevv~~~~ 161 (283)
T 4e12_A 153 TAEVMGTTK 161 (283)
T ss_dssp EEEEEECTT
T ss_pred eEEEEeCCC
Confidence 788999843
No 62
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.21 E-value=6.6e-12 Score=127.42 Aligned_cols=215 Identities=13% Similarity=0.100 Sum_probs=132.6
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCc---ccCHHHhccccCEEEEeCCCChhccccccHHH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVG---LVSFEEAISTADFISLHMPLTPATSKMFNDEA 268 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~---~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~ 268 (595)
++|+|||+|.||+.+|+.+...|++|++||++.. .+...+.|+. ..+++++ ++||+|++|+| ...+..++. +.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~-~~~~~~~~~-~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTP-IQLILPTLE-KL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSC-HHHHHHHHH-HH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECC-HHHHHHHHH-HH
Confidence 3799999999999999999999999999998763 3344556653 3478888 99999999999 445566653 34
Q ss_pred HhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCC---CCCCCCcccccCCcEEEcCCCCCCcHHHHHHHHH
Q 046427 269 FFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTE---EPPAKDSKLVLHENVTVTPHLGASTTEAQEGVAI 345 (595)
Q Consensus 269 l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~---EP~~~~~~L~~~~nvilTPHi~~~t~ea~~~~~~ 345 (595)
...++++++|+|++..+....+.+.+.+. ++.+. .-++.. .|..+.+.++....++++|+-+.. .+
T Consensus 78 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~--~~~~~-~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~-~~------- 146 (279)
T 2f1k_A 78 IPHLSPTAIVTDVASVKTAIAEPASQLWS--GFIGG-HPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTD-PE------- 146 (279)
T ss_dssp GGGSCTTCEEEECCSCCHHHHHHHHHHST--TCEEE-EECCCCSCSSGGGCCTTTTTTCEEEEEECTTCC-HH-------
T ss_pred HhhCCCCCEEEECCCCcHHHHHHHHHHhC--CEeec-CcccCCccCCHHHHhHHHhCCCcEEEecCCCCC-HH-------
Confidence 55689999999998877666666666554 34232 233322 233334467777788999975443 33
Q ss_pred HHHHHHHHHHcCCCCCccccCCCCChhhhhccc--chhHHH---HHHH--------HHHHHHhcCCCCceEEEEEEeecC
Q 046427 346 EIAEAVIGALKGELAATAVNAPMVPAEVISELA--PFVTLA---EKLG--------GLAVQLVAGGSGVKSVKVSYASAR 412 (595)
Q Consensus 346 ~~~~~l~~~l~g~~~~~~vn~~~~~~~~~~~~~--p~~~la---~rlG--------~l~~qL~~g~~~~k~v~i~~~Gs~ 412 (595)
..+.+.++++.-..+.....+..+++....++ |+.... ..++ ..+.+|+.+ .++++.....+++
T Consensus 147 -~~~~v~~l~~~~g~~~~~~~~~~~~~~~~~~~~~p~~i~~al~~~~~~~~~~~~~~~~~~l~~~--~~~~~~r~~~~~p 223 (279)
T 2f1k_A 147 -QLACLRSVLEPLGVKIYLCTPADHDQAVAWISHLPVMVSAALIQACAGEKDGDILKLAQNLASS--GFRDTSRVGGGNP 223 (279)
T ss_dssp -HHHHHHHHHGGGTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCSCHHHHHHHHHHCCH--HHHHHHTGGGSCH
T ss_pred -HHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccccchhHHHhhcCC--cccchhcccCCCH
Confidence 23455666665444333444444555555444 433222 1111 133445544 4554433334555
Q ss_pred CCCCcccccchHH
Q 046427 413 GPDDLDTRLLRAM 425 (595)
Q Consensus 413 a~~~~~~~~~~~a 425 (595)
. +|.+...++..
T Consensus 224 ~-~~~~~~~s~~~ 235 (279)
T 2f1k_A 224 E-LGTMMATYNQR 235 (279)
T ss_dssp H-HHHHHHHHSHH
T ss_pred H-HHHHHHHHhHH
Confidence 5 56665555544
No 63
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.20 E-value=2.7e-11 Score=125.39 Aligned_cols=115 Identities=11% Similarity=0.105 Sum_probs=93.8
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccc
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMF 264 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li 264 (595)
.....-++|||||+|.||..+|+.+...|++|.+||++.. .+...+.|+... ++++++++||+|++|+|....++.++
T Consensus 16 ~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~ 95 (310)
T 3doj_A 16 PRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVV 95 (310)
T ss_dssp --CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred cccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHH
Confidence 3445567999999999999999999999999999999873 345566777654 79999999999999999766676666
Q ss_pred --cHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 265 --NDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 265 --~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
....+..+++|.++||+++......+.+.+.+.+..+
T Consensus 96 ~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~ 134 (310)
T 3doj_A 96 FDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGG 134 (310)
T ss_dssp HSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 2445667999999999999998888888888876544
No 64
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.20 E-value=3.3e-10 Score=120.04 Aligned_cols=221 Identities=16% Similarity=0.174 Sum_probs=135.7
Q ss_pred CChhHHHHhhcCC-cEEecC------CCCHhHHhhh---c---CCceEEEEcCCCCCCHHHHhccCCCceEEEEcccccc
Q 046427 62 LGEAGLDVLKNFA-NVDCSY------NLSPEELCTK---I---SLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGID 128 (595)
Q Consensus 62 ~~~~~~~~l~~~~-~v~~~~------~~~~~el~~~---i---~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d 128 (595)
+.|+....|.+.+ +|.+.. .++.++..+. + -.+|+|+- - ...+.+.++.+.++..+|+..---.|
T Consensus 40 ltP~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~adiIlk-V-k~p~~~e~~~l~~g~~l~~~lh~~~~ 117 (381)
T 3p2y_A 40 LVPKVVEKLSARGLEVVVESAAGAGALFSDADYERAGATIGDPWPADVVVK-V-NPPTSDEISQLKPGSVLIGFLAPRTQ 117 (381)
T ss_dssp SCHHHHHHHHHTTCEEEECTTTTGGGTCCHHHHHHTTCEESCCTTSSEEEC-S-SCCCHHHHTTSCTTCEEEECCCTTTC
T ss_pred CCHHHHHHHHhCCCEEEEeCCCCccCCCChHHHHHCCCEEeeeecCCEEEE-e-CCCChhHHhhccCCCEEEEEeccccC
Confidence 4567777776553 565532 3456665441 1 12676552 2 23556666666667777776555444
Q ss_pred ccChhhHHhCCceEEeCCCCCchHHHH--HHHHHHHHHH--HchHHHHHHHHcCcccccccce-eeecCCEEEEEeCChH
Q 046427 129 NVDLSAATEHGCLVVNAPTANTIAAAE--HGIALLTAMA--RNIAQADASVKAGKWQRNKYVG-VSLVGKTLAVMGFGKV 203 (595)
Q Consensus 129 ~iD~~aa~~~gI~V~n~p~~~~~~vAE--~~l~l~l~~~--R~i~~~~~~~~~g~W~~~~~~g-~~l~gktvGIIGlG~I 203 (595)
.=-++++.++||...---.....+-+. .++.-|-.++ +-+..+.. .-++.......+ ..+.+++|+|+|+|.|
T Consensus 118 ~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAGy~Av~~aa~--~l~~~~~~l~~~~~~v~~~kV~ViG~G~i 195 (381)
T 3p2y_A 118 PELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAGYKAVLLGAS--LSTRFVPMLTTAAGTVKPASALVLGVGVA 195 (381)
T ss_dssp HHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHHHHHHHHHHH--HCSSCSSCEECSSCEECCCEEEEESCSHH
T ss_pred HHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHHHHHHHHHHH--HhhhhhhhhhcccCCcCCCEEEEECchHH
Confidence 434688889999885422221100000 1111111111 11111111 111111111111 2578999999999999
Q ss_pred HHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc--------------------------CHHHhccccCEEEEeC--
Q 046427 204 GTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV--------------------------SFEEAISTADFISLHM-- 254 (595)
Q Consensus 204 G~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~--------------------------~l~ell~~aD~V~l~~-- 254 (595)
|..+|+.++++|++|++||++. ..+.+.+.|.+++ ++++++++||+|+.++
T Consensus 196 G~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~i 275 (381)
T 3p2y_A 196 GLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFDIVITTALV 275 (381)
T ss_dssp HHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHHhcCCEEEECCCC
Confidence 9999999999999999999987 3455666665432 4678999999999875
Q ss_pred CCChhccccccHHHHhcCCCceEEEecc--CCchh
Q 046427 255 PLTPATSKMFNDEAFFKMKKGVRIVNVA--RGGVV 287 (595)
Q Consensus 255 Plt~~t~~li~~~~l~~mk~gailiN~a--rg~~v 287 (595)
|.. .+..+++++.++.||+|++|||+| +|+.+
T Consensus 276 Pg~-~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~ 309 (381)
T 3p2y_A 276 PGR-PAPRLVTAAAATGMQPGSVVVDLAGETGGNC 309 (381)
T ss_dssp TTS-CCCCCBCHHHHHTSCTTCEEEETTGGGTCSB
T ss_pred CCc-ccceeecHHHHhcCCCCcEEEEEeCCCCCcc
Confidence 532 366789999999999999999998 66553
No 65
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.18 E-value=6.6e-11 Score=122.69 Aligned_cols=126 Identities=16% Similarity=0.120 Sum_probs=87.3
Q ss_pred HHHHHcCcccccccc--eeeecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC---cHHHHHHcCCccc-CHHHhc
Q 046427 172 DASVKAGKWQRNKYV--GVSLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA---QADRARATGVGLV-SFEEAI 244 (595)
Q Consensus 172 ~~~~~~g~W~~~~~~--g~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~---~~~~a~~~g~~~~-~l~ell 244 (595)
++.++.+.|.++... .....-++|||||+|.||+.+|+.|...|+ +|.+||++. ..+...+.|+... ++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~ 81 (312)
T 3qsg_A 2 HHHHHHSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVA 81 (312)
T ss_dssp -----------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHH
T ss_pred CcccccccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHH
Confidence 456677888754211 123345799999999999999999999999 999999962 2344556787654 799999
Q ss_pred cccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcC
Q 046427 245 STADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSG 299 (595)
Q Consensus 245 ~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g 299 (595)
++||+|++|+|...... .+ .+....++++.+|||+++.......++.+.+.+.
T Consensus 82 ~~aDvVi~~vp~~~~~~-~~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~ 134 (312)
T 3qsg_A 82 GECDVIFSLVTAQAALE-VA-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRH 134 (312)
T ss_dssp HHCSEEEECSCTTTHHH-HH-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHH
T ss_pred hcCCEEEEecCchhHHH-HH-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhh
Confidence 99999999999665443 33 4566779999999999999988888888888764
No 66
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.17 E-value=4.8e-11 Score=122.75 Aligned_cols=108 Identities=20% Similarity=0.197 Sum_probs=92.2
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccHHHH
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFNDEAF 269 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~~~l 269 (595)
.++|||||+|.||+.+|+.+...|++|.+||++.. .+...+.|+... +++++++ ||+|++|+|....++.++ ....
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 36899999999999999999999999999999873 455566777654 8999999 999999999766777777 5667
Q ss_pred hcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 270 FKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 270 ~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
..++++.++||+++......+.+.+.+.+..+
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~ 124 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDI 124 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTC
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCC
Confidence 78999999999999998888889888877655
No 67
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.16 E-value=9.1e-11 Score=124.08 Aligned_cols=121 Identities=13% Similarity=0.199 Sum_probs=99.1
Q ss_pred ecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCccc-CHHHhcccc---CEEEEeCCCChhccccc
Q 046427 190 LVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLV-SFEEAISTA---DFISLHMPLTPATSKMF 264 (595)
Q Consensus 190 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-~l~ell~~a---D~V~l~~Plt~~t~~li 264 (595)
+.+++|||||+|.||+.+|+.|...|++|.+||++.. .+...+.|+... ++++++++| |+|++|+|.. .+..++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 5678999999999999999999999999999999763 344555677654 899999999 9999999966 677777
Q ss_pred cHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCC
Q 046427 265 NDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTEE 312 (595)
Q Consensus 265 ~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~E 312 (595)
...+..+++|.+|||++++...+...+.+.+.+..+......|++.+
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~ 145 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGI 145 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGG
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCH
Confidence 45677799999999999999989899999998877755555566654
No 68
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.15 E-value=6.3e-11 Score=121.01 Aligned_cols=109 Identities=13% Similarity=0.138 Sum_probs=91.6
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCccc-CHHHhccccCEEEEeCCCChhcccccc--HHH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFN--DEA 268 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~--~~~ 268 (595)
++|||||+|.||+.+|+.+...|++|.+||++.. .+...+.|+... ++++++++||+|++|+|....++.++. ...
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 6899999999999999999999999999999873 455566677654 899999999999999996666776662 445
Q ss_pred HhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 269 FFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 269 l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
...+++|.++||+++....+.+.+.+.+.+..+
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~ 114 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGG 114 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 667999999999999998888888888877655
No 69
>2iaf_A Hypothetical protein SDHL; MCSG, PSI2, MAD, structural genomics, L-serine dehydratase, structure initiative; 2.05A {Legionella pneumophila} SCOP: d.81.2.1 PDB: 2iqq_A
Probab=99.14 E-value=1.3e-11 Score=114.02 Aligned_cols=114 Identities=12% Similarity=0.009 Sum_probs=80.4
Q ss_pred hhHHHHHHHHHHHHHhcCC---CCceEEEEEEeecCCCCCcccccchHHHHHhhcccccccccc----------cccH--
Q 046427 380 FVTLAEKLGGLAVQLVAGG---SGVKSVKVSYASARGPDDLDTRLLRAMITKGIIEPISSVFVN----------LVNA-- 444 (595)
Q Consensus 380 ~~~la~rlG~l~~qL~~g~---~~~k~v~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn----------~~nA-- 444 (595)
|-.=+.|+|+.+++++... ..++++++.++|||+ .|+++|++|+|++.|||+ +..++++ ++++
T Consensus 9 HT~Gpmraa~~f~~~l~~~~~l~~~~~v~v~LyGSla-~TgkGHgTD~Aii~GL~G-~~pd~~~~~~~~~~~~~i~~~~~ 86 (151)
T 2iaf_A 9 HTVGPMLAANAFLQLLEQKNLFDKTQRVKVELYGSLA-LTGKGHGTDKAILNGLEN-KAPETVDPASMIPRMHEILDSNL 86 (151)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCTTTCCEEEEEEEHHHH-HTCTTSSHHHHHHHHTTT-CCCC-----CHHHHHHHHHHHTE
T ss_pred HHHHHHHHHHHHHHHHhhccccCCCcEEEEEEEchHH-hhCCCccccHHHHhhhcC-CCCCccChhhhHHHHHHHHhcCc
Confidence 4445678898888888520 158999999999998 999999999999999994 4555776 4444
Q ss_pred HHHHhhCCceEE------EEEeecCCCCCCCceEEEEEeeeccccccccccCCce-EEEEE-EEeCCeeEE
Q 046427 445 DFIAKQRGLRVT------EERIVLDGSPENPLEFIQVQIANVESKFGSAISDIGD-IRVEG-RVKDGKPHL 507 (595)
Q Consensus 445 ~~iA~e~GI~v~------f~~~~~~~~hpnt~~~~~~~~~~~~~~~g~sig~~~~-~~v~G-SvgGG~i~I 507 (595)
+.+|.+++|.+. |...+.-+.|||+..+...+. ++.. +++.+ |||||.|+.
T Consensus 87 l~la~~~~i~f~~~~di~f~~~~~lp~HpN~m~~~a~~~------------~g~~l~~~~~ySIGGGfI~~ 145 (151)
T 2iaf_A 87 LNLAGKKEIPFHEATDFLFLQKELLPKHSNGMRFSAFDG------------NANLLIEQVYYSIGGGFITT 145 (151)
T ss_dssp EEETTTEEEECCHHHHEEEETTCCCSSCSSEEEEEEECT------------TSCEEEEEEEEECSSSCEEE
T ss_pred cccCCcceeEEccccceeEcCCCCCCCCCCeeEEEEEeC------------CCCEEEEEEEEEeCCceEEE
Confidence 346777877664 333332346999998877643 3333 46777 898998753
No 70
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.14 E-value=1.6e-11 Score=124.19 Aligned_cols=176 Identities=16% Similarity=0.142 Sum_probs=124.0
Q ss_pred CCCHhHHhhhcCC----ceEEEEcCCCCCCHHHHhccCCCceEEEEccccccccChhhHHhCCceEEeCCCCCchHHHHH
Q 046427 81 NLSPEELCTKISL----CDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDNVDLSAATEHGCLVVNAPTANTIAAAEH 156 (595)
Q Consensus 81 ~~~~~el~~~i~~----~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~~~~~vAE~ 156 (595)
..+++++.+.+.+ ++++.+. .++.++++..+ ++|.-+++...|+|.++. +.| +..|+|+..
T Consensus 37 ~~~~~~l~~~i~~l~~~~~G~~vt--~P~k~~i~~~~-~~l~~~a~~~gavn~i~~----~~g----~~~g~ntd~---- 101 (263)
T 2d5c_A 37 DTPLEALPGRLKEVRRAFRGVNLT--LPLKEAALAHL-DWVSPEAQRIGAVNTVLQ----VEG----RLFGFNTDA---- 101 (263)
T ss_dssp ECCGGGHHHHHHHHHHHCSEEEEC--TTCTTGGGGGC-SEECHHHHHHTCCCEEEE----ETT----EEEEECCHH----
T ss_pred eCCHHHHHHHHHhccccCceEEEc--ccCHHHHHHHH-HHHhHHHHHhCCCCcEEc----cCC----eEEEeCCCH----
Confidence 4466677665543 4445442 47788888887 588888999999999875 344 234566654
Q ss_pred HHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH--HHHHHcC
Q 046427 157 GIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA--DRARATG 234 (595)
Q Consensus 157 ~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g 234 (595)
.+++.++.| .+.++.| +++|||+|.||+.+|+.+..+|++|.+||++... ..+.+.+
T Consensus 102 -~g~~~~l~~-------------------~~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~ 160 (263)
T 2d5c_A 102 -PGFLEALKA-------------------GGIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG 160 (263)
T ss_dssp -HHHHHHHHH-------------------TTCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT
T ss_pred -HHHHHHHHH-------------------hCCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 355555443 1336889 9999999999999999999999999999987532 2333445
Q ss_pred CcccCHHHhccccCEEEEeCCCCh--hccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhc
Q 046427 235 VGLVSFEEAISTADFISLHMPLTP--ATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDS 298 (595)
Q Consensus 235 ~~~~~l~ell~~aD~V~l~~Plt~--~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~ 298 (595)
....+++++ +++|+|++|+|... ++...+. ...+++|.+++|++.+.. +. .+.+++++
T Consensus 161 ~~~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~---~~~l~~g~~viD~~~~p~-~t-~l~~~a~~ 220 (263)
T 2d5c_A 161 LRAVPLEKA-REARLLVNATRVGLEDPSASPLP---AELFPEEGAAVDLVYRPL-WT-RFLREAKA 220 (263)
T ss_dssp CEECCGGGG-GGCSEEEECSSTTTTCTTCCSSC---GGGSCSSSEEEESCCSSS-SC-HHHHHHHH
T ss_pred cchhhHhhc-cCCCEEEEccCCCCCCCCCCCCC---HHHcCCCCEEEEeecCCc-cc-HHHHHHHH
Confidence 554578888 99999999999762 2334453 456899999999998743 33 36665554
No 71
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.13 E-value=8.2e-10 Score=117.86 Aligned_cols=222 Identities=17% Similarity=0.205 Sum_probs=131.4
Q ss_pred CChhHHHHhhcCC-cEEecC------CCCHhHHhh---------hcCCceEEEEcCCCCCCHHHHhccCCCceEEEEccc
Q 046427 62 LGEAGLDVLKNFA-NVDCSY------NLSPEELCT---------KISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGV 125 (595)
Q Consensus 62 ~~~~~~~~l~~~~-~v~~~~------~~~~~el~~---------~i~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~ 125 (595)
+.|+....|.+.+ +|.+.. .++.++..+ .+.++|+|+-- . ..+.+.++.+.++-.+|+..--
T Consensus 43 ltP~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~~~~adiIlkV-k-~p~~~e~~~l~~g~~l~~~lh~ 120 (405)
T 4dio_A 43 GSVESVKKLKSLGFDVVVEAGAGLGSRIPDQEYEKAGARVGTAADAKTADVILKV-R-RPSAQEISGYRSGAVVIAIMDP 120 (405)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEECGGGGGGCSEEEEE-E-CCCTTTGGGSCTTCEEEEECCC
T ss_pred CCHHHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHcCCEEchHHhhccCCEEEEe-C-CCChhHHhhcCCCcEEEEEecc
Confidence 3456666665443 444422 234444432 13357876632 1 2233444555566777765544
Q ss_pred cccccChhhHHhCCceEEeCCCCCchHHHHH--HHHHHHHHH--HchHHHHHHHHcCcccccccce-eeecCCEEEEEeC
Q 046427 126 GIDNVDLSAATEHGCLVVNAPTANTIAAAEH--GIALLTAMA--RNIAQADASVKAGKWQRNKYVG-VSLVGKTLAVMGF 200 (595)
Q Consensus 126 G~d~iD~~aa~~~gI~V~n~p~~~~~~vAE~--~l~l~l~~~--R~i~~~~~~~~~g~W~~~~~~g-~~l~gktvGIIGl 200 (595)
.-|.=-++++.++||...---.....+-|.- +++-|-.++ +-+..+.. .-++.......+ ..+.+.+|+|+|+
T Consensus 121 ~~~~~l~~~l~~~~it~ia~E~i~r~~ra~~l~~ls~~s~iAGy~Av~~aa~--~l~~~~~~l~t~~g~v~~~kV~ViG~ 198 (405)
T 4dio_A 121 YGNEEAISAMAGAGLTTFAMELMPRITRAQSMDVLSSQANLAGYQAVIDAAY--EYDRALPMMMTAAGTVPAAKIFVMGA 198 (405)
T ss_dssp TTCHHHHHHHHHTTCEEEEGGGSCCSGGGGGGCHHHHHHHHHHHHHHHHHHH--HCSSCSSCEEETTEEECCCEEEEECC
T ss_pred ccCHHHHHHHHHCCCeEEEeeccccccccCccceecchhHHHHHHHHHHHHH--HhHhhhchhhccCCCcCCCEEEEECC
Confidence 4343345888899998853222211000000 111111111 11111111 111111111111 2578999999999
Q ss_pred ChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCcc------------------------------cCHHHhccccCE
Q 046427 201 GKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGL------------------------------VSFEEAISTADF 249 (595)
Q Consensus 201 G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~------------------------------~~l~ell~~aD~ 249 (595)
|.||..+|+.++++|++|++||++.. .+.+.+.|..+ .++++++++||+
T Consensus 199 G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~~aDV 278 (405)
T 4dio_A 199 GVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALVAEHIAKQDI 278 (405)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHHHHHHHTCSE
T ss_pred cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHHHHHhcCCCE
Confidence 99999999999999999999999874 35555666532 147788999999
Q ss_pred EEEeC--CCChhccccccHHHHhcCCCceEEEecc--CCchhc
Q 046427 250 ISLHM--PLTPATSKMFNDEAFFKMKKGVRIVNVA--RGGVVD 288 (595)
Q Consensus 250 V~l~~--Plt~~t~~li~~~~l~~mk~gailiN~a--rg~~vd 288 (595)
|+.++ |.. ....+++++.++.||+|++|||+| +|+.++
T Consensus 279 VI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e 320 (405)
T 4dio_A 279 VITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERGGNIE 320 (405)
T ss_dssp EEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGTCSBT
T ss_pred EEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCCCCcc
Confidence 99875 533 367889999999999999999998 666543
No 72
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.13 E-value=1.3e-11 Score=129.54 Aligned_cols=136 Identities=21% Similarity=0.285 Sum_probs=98.7
Q ss_pred eeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc--HHHHHHcCCcccCHHHhccccCEEEEeCCCChhcccccc
Q 046427 188 VSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ--ADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFN 265 (595)
Q Consensus 188 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~--~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~ 265 (595)
..+.+++|||||+|.||+++|+.++..|++|++||+... .+.+.+.|+...++++++++||+|++|+|... ...++.
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~~~-~~~v~~ 90 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEF-QGRLYK 90 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHH-HHHHHH
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCcHH-HHHHHH
Confidence 358899999999999999999999999999999998763 35566778766689999999999999999544 466665
Q ss_pred HHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCc---cccc---CCcEEEcCCCC
Q 046427 266 DEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDS---KLVL---HENVTVTPHLG 333 (595)
Q Consensus 266 ~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~---~L~~---~~nvilTPHi~ 333 (595)
++....|+++++|++++ + +.. ....+.. +.+.|++...|..+.+ .|++ ..++++|||-.
T Consensus 91 ~~i~~~l~~~~ivi~~~--g-v~~--~~~~~~~----~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~ 155 (338)
T 1np3_A 91 EEIEPNLKKGATLAFAH--G-FSI--HYNQVVP----RADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQD 155 (338)
T ss_dssp HHTGGGCCTTCEEEESC--C-HHH--HTTSSCC----CTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEEC
T ss_pred HHHHhhCCCCCEEEEcC--C-chh--HHHhhcC----CCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCC
Confidence 35556799999999884 3 233 2222221 2233455555533332 4565 77889999854
No 73
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.12 E-value=2.8e-10 Score=123.82 Aligned_cols=145 Identities=21% Similarity=0.255 Sum_probs=107.8
Q ss_pred ccccccccC-hhhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCC
Q 046427 123 AGVGIDNVD-LSAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFG 201 (595)
Q Consensus 123 ~g~G~d~iD-~~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG 201 (595)
.++|+.... +.+..+..|+|.|+.+..+.+..+...+.- +.+..+-|. ..+..+.||+++|+|+|
T Consensus 209 TttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yGt~-----------~sl~dgi~r---~tg~~L~GKtVvVtGaG 274 (488)
T 3ond_A 209 TTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCR-----------HSLPDGLMR---ATDVMIAGKVAVVAGYG 274 (488)
T ss_dssp SHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHH-----------HHHHHHHHH---HHCCCCTTCEEEEECCS
T ss_pred ccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhcccc-----------HHHHHHHHH---HcCCcccCCEEEEECCC
Confidence 567777642 233345779999998765554333222211 112222221 23457999999999999
Q ss_pred hHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEe
Q 046427 202 KVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVN 280 (595)
Q Consensus 202 ~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN 280 (595)
.||+.+|++++++|++|+++|++. ....+...++...+++++++.+|+++.+. .+.++++.+.+..||++++|+|
T Consensus 275 gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~at----G~~~vl~~e~l~~mk~gaiVvN 350 (488)
T 3ond_A 275 DVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTT----GNKDIIMLDHMKKMKNNAIVCN 350 (488)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECS----SCSCSBCHHHHTTSCTTEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCC----CChhhhhHHHHHhcCCCeEEEE
Confidence 999999999999999999999876 33445667777778999999999999865 4678899999999999999999
Q ss_pred ccCCc
Q 046427 281 VARGG 285 (595)
Q Consensus 281 ~arg~ 285 (595)
++++.
T Consensus 351 aG~~~ 355 (488)
T 3ond_A 351 IGHFD 355 (488)
T ss_dssp SSSTT
T ss_pred cCCCC
Confidence 99973
No 74
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.11 E-value=9.4e-11 Score=120.82 Aligned_cols=110 Identities=18% Similarity=0.205 Sum_probs=90.9
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCcc--cCHHHhccccCEEEEeCCCChhcccccc--H
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGL--VSFEEAISTADFISLHMPLTPATSKMFN--D 266 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~--~~l~ell~~aD~V~l~~Plt~~t~~li~--~ 266 (595)
.++|||||+|.||+.+|+.+...|++|.+||++.. .+...+.|... .++++++++||+|++|+|....++.++. +
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 46899999999999999999999999999999763 34455667654 4899999999999999997666666652 3
Q ss_pred HHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 267 EAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 267 ~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
..+..++++.++||+++......+.+.+.+.+..+
T Consensus 87 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~ 121 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTISSADAQEIAAALTALNL 121 (303)
T ss_dssp CCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 45567899999999999998888888888877554
No 75
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.11 E-value=7.6e-11 Score=120.42 Aligned_cols=109 Identities=15% Similarity=0.129 Sum_probs=90.7
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCccc-CHHHhccccCEEEEeCCCChhcccccc--HHH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFN--DEA 268 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~--~~~ 268 (595)
++|||||+|.||+.+|+.+...|++|.+||++.. .+...+.|+... ++++++++||+|++|+|..+.++.++. ...
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 4799999999999999999999999999999873 345556677654 899999999999999997666776662 345
Q ss_pred HhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 269 FFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 269 l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
+..++++.++||++++.....+.+.+.+.+..+
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~ 114 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGG 114 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 667899999999999998888888888876544
No 76
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.07 E-value=1.9e-10 Score=118.11 Aligned_cols=109 Identities=17% Similarity=0.252 Sum_probs=90.4
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccH--HH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFND--EA 268 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~--~~ 268 (595)
++|||||+|.||+.+|+.+...|++|.+||++. ..+...+.|+... ++++++++||+|++|+|....++.++.. +.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 589999999999999999999999999999976 3344556677654 7999999999999999976666766641 45
Q ss_pred HhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 269 FFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 269 l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
+..++++.++||++++.....+.+.+.+.+..+
T Consensus 84 ~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~ 116 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGL 116 (302)
T ss_dssp GGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 667999999999999998888888888876433
No 77
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.99 E-value=2.8e-10 Score=115.88 Aligned_cols=165 Identities=19% Similarity=0.217 Sum_probs=115.8
Q ss_pred CCCHhHHhhhcC-----CceEEEEcCCCCCCHHHHhccCCCceEEEEccccccccChhhHHhCCceEEeCCCCCchHHHH
Q 046427 81 NLSPEELCTKIS-----LCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDNVDLSAATEHGCLVVNAPTANTIAAAE 155 (595)
Q Consensus 81 ~~~~~el~~~i~-----~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~~~~~vAE 155 (595)
..+++++.+.+. +++++.+. .+..++++..+ ..+.-.++...++|.++. +.|- ..|+|+...
T Consensus 48 ~~~~~~l~~~i~~l~~~~~~G~nvt--iP~k~~i~~~l-d~l~~~A~~~gavnti~~----~~g~----~~g~nTd~~-- 114 (275)
T 2hk9_A 48 EINPEELKKAFEGFKALKVKGINVT--VPFKEEIIPLL-DYVEDTAKEIGAVNTVKF----ENGK----AYGYNTDWI-- 114 (275)
T ss_dssp ECCGGGHHHHHHHHHHHTCCEEEEC--TTSTTTTGGGC-SEECHHHHHHTCCCEEEE----ETTE----EEEECCHHH--
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEC--ccCHHHHHHHH-HHhhHHHHHhCCcceEEe----eCCE----EEeecCCHH--
Confidence 456666665543 56788774 46777788776 467777777888888764 3442 235666443
Q ss_pred HHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH--HHHHHc
Q 046427 156 HGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA--DRARAT 233 (595)
Q Consensus 156 ~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~ 233 (595)
+++.++.| .+.++.|++++|||.|.+|+++|+.+...|++|.+||++... ..+...
T Consensus 115 ---G~~~~l~~-------------------~~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~ 172 (275)
T 2hk9_A 115 ---GFLKSLKS-------------------LIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF 172 (275)
T ss_dssp ---HHHHHHHH-------------------HCTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS
T ss_pred ---HHHHHHHH-------------------hCCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc
Confidence 44444433 123578899999999999999999999999999999987532 122233
Q ss_pred CCccc-CHHHhccccCEEEEeCCCCh--hccccccHHHHhcCCCceEEEeccC
Q 046427 234 GVGLV-SFEEAISTADFISLHMPLTP--ATSKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 234 g~~~~-~l~ell~~aD~V~l~~Plt~--~t~~li~~~~l~~mk~gailiN~ar 283 (595)
|+... ++.++++++|+|++|+|... ++...++ +..++++.+++|++.
T Consensus 173 g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i~---~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 173 PLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFN---YDLIKKDHVVVDIIY 222 (275)
T ss_dssp CEEECSCGGGTGGGCSEEEECSSTTSSTTCCCSSC---GGGCCTTSEEEESSS
T ss_pred CCeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCCC---HHHcCCCCEEEEcCC
Confidence 54444 78899999999999999764 2223443 355899999999988
No 78
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=98.95 E-value=1.8e-09 Score=118.28 Aligned_cols=119 Identities=19% Similarity=0.197 Sum_probs=94.3
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHc---CCc---ccCHHHhcc---ccCEEEEeCCCChhccc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARAT---GVG---LVSFEEAIS---TADFISLHMPLTPATSK 262 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~---g~~---~~~l~ell~---~aD~V~l~~Plt~~t~~ 262 (595)
++|||||+|.||+.+|+++...|++|.+||++.. .+...+. +.. ..+++++++ +||+|++|+|..+.+..
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~ 84 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDD 84 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHHH
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHHH
Confidence 5799999999999999999999999999999873 2333333 222 247888876 59999999998777877
Q ss_pred cccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCC
Q 046427 263 MFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTEE 312 (595)
Q Consensus 263 li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~E 312 (595)
++ .+....|++|.+|||++++...+...+.+.+.+..+.....-|++.+
T Consensus 85 vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~ 133 (484)
T 4gwg_A 85 FI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGE 133 (484)
T ss_dssp HH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHH
T ss_pred HH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCH
Confidence 77 45677899999999999999988888888888776644444455544
No 79
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.93 E-value=3.2e-09 Score=109.20 Aligned_cols=127 Identities=17% Similarity=0.181 Sum_probs=86.9
Q ss_pred ecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHc-------CCccc-CHHHhccccCEEEEeCCCChhc
Q 046427 190 LVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARAT-------GVGLV-SFEEAISTADFISLHMPLTPAT 260 (595)
Q Consensus 190 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~-------g~~~~-~l~ell~~aD~V~l~~Plt~~t 260 (595)
-+.|+|||||+|.||+.+|+.+. .|++|++||++.. .+.+.+. ++... ++++ +++||+|+.|+|...+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~v 87 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNT 87 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHH
Confidence 45689999999999999999999 9999999999763 3344443 44333 6766 89999999999988877
Q ss_pred cccccHHHHhcCCCceEE-EeccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCCC
Q 046427 261 SKMFNDEAFFKMKKGVRI-VNVARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPHL 332 (595)
Q Consensus 261 ~~li~~~~l~~mk~gail-iN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPHi 332 (595)
+..+-.+ ++.+ +++++ +|+|.-.+ ..+.+++.. .....++.-|. |.+ ..+-+.++|+-
T Consensus 88 k~~l~~~-l~~~-~~~IlasntSti~~---~~~a~~~~~-~~r~~G~Hf~~--Pv~------~~~lveiv~g~ 146 (293)
T 1zej_A 88 KVEVLRE-VERL-TNAPLCSNTSVISV---DDIAERLDS-PSRFLGVHWMN--PPH------VMPLVEIVISR 146 (293)
T ss_dssp HHHHHHH-HHTT-CCSCEEECCSSSCH---HHHHTTSSC-GGGEEEEEECS--STT------TCCEEEEEECT
T ss_pred HHHHHHH-HhcC-CCCEEEEECCCcCH---HHHHHHhhc-ccceEeEEecC--ccc------cCCEEEEECCC
Confidence 6666443 5667 99888 58877544 344444432 22235666665 432 23455677753
No 80
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.93 E-value=1.2e-09 Score=111.75 Aligned_cols=109 Identities=14% Similarity=0.241 Sum_probs=87.8
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCcc-cCHHHhccccCEEEEeCCCChhcccccc--HHH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGL-VSFEEAISTADFISLHMPLTPATSKMFN--DEA 268 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~-~~l~ell~~aD~V~l~~Plt~~t~~li~--~~~ 268 (595)
++|+|||+|.||+.+|+.+...|++|.+||++.. .+...+.|+.. .+++++++++|+|++|+|....+..++. .+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 4899999999999999999999999999998763 34444557654 3788999999999999996666666663 234
Q ss_pred HhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 269 FFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 269 l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
...++++.++||++.|...+.+.+.+.+.+..+
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~ 118 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKAKGV 118 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 466899999999999987778888888876433
No 81
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=98.93 E-value=4.4e-10 Score=112.39 Aligned_cols=100 Identities=19% Similarity=0.245 Sum_probs=66.7
Q ss_pred ccccccceeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH---------------HHH-HHcCC-cccCHHH
Q 046427 180 WQRNKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA---------------DRA-RATGV-GLVSFEE 242 (595)
Q Consensus 180 W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---------------~~a-~~~g~-~~~~l~e 242 (595)
|........++.+++|||||+|.||+.+|+.|...|++|++||++... ... ...+. ...++.+
T Consensus 7 ~~~~~~~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 86 (245)
T 3dtt_A 7 HHHHHHENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFAD 86 (245)
T ss_dssp ------------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHH
T ss_pred cccccccccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHH
Confidence 333345677899999999999999999999999999999999987532 111 12232 3447899
Q ss_pred hccccCEEEEeCCCChhccccccHHH-HhcCCCceEEEecc
Q 046427 243 AISTADFISLHMPLTPATSKMFNDEA-FFKMKKGVRIVNVA 282 (595)
Q Consensus 243 ll~~aD~V~l~~Plt~~t~~li~~~~-l~~mk~gailiN~a 282 (595)
++++||+|++|+|... ....+.. . ...+ ++.++||++
T Consensus 87 ~~~~aDvVilavp~~~-~~~~~~~-i~~~~l-~g~ivi~~s 124 (245)
T 3dtt_A 87 VAAGAELVVNATEGAS-SIAALTA-AGAENL-AGKILVDIA 124 (245)
T ss_dssp HHHHCSEEEECSCGGG-HHHHHHH-HCHHHH-TTSEEEECC
T ss_pred HHhcCCEEEEccCcHH-HHHHHHH-hhhhhc-CCCEEEECC
Confidence 9999999999999654 3333322 1 2234 899999999
No 82
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.93 E-value=5.8e-09 Score=108.54 Aligned_cols=128 Identities=17% Similarity=0.130 Sum_probs=88.9
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHH-----------HcC--------------Ccc-cCHHHhcc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRAR-----------ATG--------------VGL-VSFEEAIS 245 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~-----------~~g--------------~~~-~~l~ell~ 245 (595)
++|||||+|.||.++|..+...|++|.+||++.. .+.+. +.| +.. .+++++++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav~ 86 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAVE 86 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHTT
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHHh
Confidence 6899999999999999999999999999999763 22221 123 122 37899999
Q ss_pred ccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcC-CeeEEEEecCCCCCCCCCcccccCC
Q 046427 246 TADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSG-IISQAALDVFTEEPPAKDSKLVLHE 324 (595)
Q Consensus 246 ~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g-~i~ga~lDv~~~EP~~~~~~L~~~~ 324 (595)
+||+|++|+|...+.+.-+-++....++++++|++++.+ +....+.+.+... ++ .+.+-|. |+ .. .+
T Consensus 87 ~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~~~r~--ig~Hp~~--P~-~~-----~~ 154 (319)
T 2dpo_A 87 GVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAHVKQC--IVAHPVN--PP-YY-----IP 154 (319)
T ss_dssp TEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTTGGGE--EEEEECS--ST-TT-----CC
T ss_pred cCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCCCCCe--EEeecCC--ch-hh-----cc
Confidence 999999999977665544445566678999999866655 3445666666432 34 4555444 32 12 33
Q ss_pred cEEEcCCC
Q 046427 325 NVTVTPHL 332 (595)
Q Consensus 325 nvilTPHi 332 (595)
-+.++|+-
T Consensus 155 lveiv~g~ 162 (319)
T 2dpo_A 155 LVELVPHP 162 (319)
T ss_dssp EEEEEECT
T ss_pred eEEEeCCC
Confidence 45677754
No 83
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.90 E-value=1e-09 Score=118.57 Aligned_cols=104 Identities=21% Similarity=0.302 Sum_probs=80.5
Q ss_pred cCcccccccceeeecC-CEEEEEeCChHHHHHHHHHhcC------CCEEEEECCC-C-cHHHHHHcCCcc-----cCHHH
Q 046427 177 AGKWQRNKYVGVSLVG-KTLAVMGFGKVGTEVARRAKGL------GMNVIAHDPY-A-QADRARATGVGL-----VSFEE 242 (595)
Q Consensus 177 ~g~W~~~~~~g~~l~g-ktvGIIGlG~IG~~vA~~l~~~------G~~V~~~d~~-~-~~~~a~~~g~~~-----~~l~e 242 (595)
.|+|... .....|+| |+|||||+|.||+++|+.|+.. |++|++.++. . ..+.+.+.|+.. .++++
T Consensus 39 ~~~w~~~-~~~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aE 117 (525)
T 3fr7_A 39 GGRNLFP-LLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWE 117 (525)
T ss_dssp CCGGGGG-GHHHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHH
T ss_pred ccccccc-cChHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHH
Confidence 3556542 12356999 9999999999999999999987 9998865443 3 456677888874 58999
Q ss_pred hccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCC
Q 046427 243 AISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARG 284 (595)
Q Consensus 243 ll~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg 284 (595)
++++||+|++++|.... ..++. +.+..||+|++| -.+-|
T Consensus 118 Aa~~ADVVILaVP~~~~-~eVl~-eI~p~LK~GaIL-s~AaG 156 (525)
T 3fr7_A 118 TVSGSDLVLLLISDAAQ-ADNYE-KIFSHMKPNSIL-GLSHG 156 (525)
T ss_dssp HHHHCSEEEECSCHHHH-HHHHH-HHHHHSCTTCEE-EESSS
T ss_pred HHhcCCEEEECCChHHH-HHHHH-HHHHhcCCCCeE-EEeCC
Confidence 99999999999997654 35665 678889999995 45555
No 84
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.89 E-value=2.4e-09 Score=108.70 Aligned_cols=106 Identities=16% Similarity=0.170 Sum_probs=84.6
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFK 271 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~ 271 (595)
++|||||+|.||+.+|+.+.. |++|.+||++.. .+...+.|+...+++++++++|+|++|+|....+..++ ++....
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~~ 79 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVA-EALYPY 79 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHH-HHHTTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHH-HHHHhh
Confidence 479999999999999999999 999999998763 33344446544447788899999999999655566665 444567
Q ss_pred CCCceEEEeccCCchhcHHHHHHHHhcCC
Q 046427 272 MKKGVRIVNVARGGVVDEEALVRALDSGI 300 (595)
Q Consensus 272 mk~gailiN~arg~~vd~~aL~~aL~~g~ 300 (595)
++++.++||++.+...+.+.+.+.+.+..
T Consensus 80 l~~~~~vv~~s~~~~~~~~~l~~~~~~~g 108 (289)
T 2cvz_A 80 LREGTYWVDATSGEPEASRRLAERLREKG 108 (289)
T ss_dssp CCTTEEEEECSCCCHHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHcC
Confidence 89999999999988878888888887643
No 85
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.89 E-value=1.7e-09 Score=110.34 Aligned_cols=106 Identities=18% Similarity=0.307 Sum_probs=84.1
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccH--HH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFND--EA 268 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~--~~ 268 (595)
++|||||+|.||+.+|+.+...|++|.+||++.. .+...+.|+... ++++++++||+|++|+|....++.++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 3699999999999999999999999999999763 344455576543 7899999999999999976667766643 23
Q ss_pred HhcCCCceEEEeccCCchhcHHHHHHHHhc
Q 046427 269 FFKMKKGVRIVNVARGGVVDEEALVRALDS 298 (595)
Q Consensus 269 l~~mk~gailiN~arg~~vd~~aL~~aL~~ 298 (595)
+..++++.++|+++.....+.+.+.+.+.+
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~ 110 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEK 110 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 456899999999887777666777776654
No 86
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=98.89 E-value=2e-09 Score=110.11 Aligned_cols=107 Identities=17% Similarity=0.232 Sum_probs=86.5
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCccc-CHHHhccccCEEEEeCCCChhcccccc--HHH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFN--DEA 268 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~--~~~ 268 (595)
++|||||+|.||+.+|+.+...|++|.+||++.. .+...+.|+... +++++++++|+|++|+|....++.++. .+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 5899999999999999999999999999998763 333444466543 789999999999999997666777764 244
Q ss_pred HhcCCCceEEEeccCCchhcHHHHHHHHhcC
Q 046427 269 FFKMKKGVRIVNVARGGVVDEEALVRALDSG 299 (595)
Q Consensus 269 l~~mk~gailiN~arg~~vd~~aL~~aL~~g 299 (595)
...++++.+||++++|...+.+.+.+.+.+.
T Consensus 85 ~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~ 115 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVSPSSTLKMAKVAAEK 115 (301)
T ss_dssp HHHSCTTCEEEECCCCCHHHHHHHHHHHHHT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 5678999999999998876778888888763
No 87
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=98.89 E-value=1.8e-09 Score=110.03 Aligned_cols=106 Identities=17% Similarity=0.226 Sum_probs=85.5
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCcc-cCHHHhccccCEEEEeCCCChhccccccH--HH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGL-VSFEEAISTADFISLHMPLTPATSKMFND--EA 268 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~-~~l~ell~~aD~V~l~~Plt~~t~~li~~--~~ 268 (595)
++|||||+|.||+.+|+.+...|++|.+|| +. ..+...+.|+.. .++++++++||+|++|+|....+..++.. ..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 489999999999999999999999999999 65 334444457654 37899999999999999966556666542 34
Q ss_pred HhcCCCceEEEeccCCchhcHHHHHHHHhcC
Q 046427 269 FFKMKKGVRIVNVARGGVVDEEALVRALDSG 299 (595)
Q Consensus 269 l~~mk~gailiN~arg~~vd~~aL~~aL~~g 299 (595)
...++++.+||+++.+...+.+.+.+.+.+.
T Consensus 83 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 113 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSISPIETKRFAQRVNEM 113 (295)
T ss_dssp TTSCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 4568999999999999877788888888764
No 88
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.41 E-value=1.8e-10 Score=112.03 Aligned_cols=94 Identities=17% Similarity=0.239 Sum_probs=76.1
Q ss_pred ecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHH
Q 046427 190 LVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAF 269 (595)
Q Consensus 190 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l 269 (595)
+.+++|||||+|.||+.+|+.+..+|++|.+||++...+.....|+...++++++++||+|++|+|.. .+..++ .+
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~aDvVilav~~~-~~~~v~---~l 92 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEAASRSDVIVLAVHRE-HYDFLA---EL 92 (201)
Confidence 67789999999999999999999999999999987542223334555557889999999999999964 577776 24
Q ss_pred hcCCCceEEEeccCCchh
Q 046427 270 FKMKKGVRIVNVARGGVV 287 (595)
Q Consensus 270 ~~mk~gailiN~arg~~v 287 (595)
..++++.+|||+++|-..
T Consensus 93 ~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 93 ADSLKGRVLIDVSNNQKM 110 (201)
Confidence 557789999999998753
No 89
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=98.87 E-value=4.8e-09 Score=115.09 Aligned_cols=111 Identities=15% Similarity=0.145 Sum_probs=88.7
Q ss_pred ecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHc----CCcc-cCHHHhccc---cCEEEEeCCCChhc
Q 046427 190 LVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARAT----GVGL-VSFEEAIST---ADFISLHMPLTPAT 260 (595)
Q Consensus 190 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~----g~~~-~~l~ell~~---aD~V~l~~Plt~~t 260 (595)
..-++|||||+|.||+.+|+++...|++|.+||++.. .+...+. |+.. .++++++++ ||+|++++|....+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 92 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGT 92 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHH
Confidence 4557899999999999999999999999999999763 2323332 5544 378898887 99999999976778
Q ss_pred cccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 261 SKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 261 ~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
+.++. +....+++|.+|||++.|...+...+.+.+.+..+
T Consensus 93 ~~vl~-~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~ 132 (480)
T 2zyd_A 93 DAAID-SLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGF 132 (480)
T ss_dssp HHHHH-HHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCC
Confidence 88874 45677899999999999988888888888876444
No 90
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.87 E-value=1.5e-08 Score=110.07 Aligned_cols=166 Identities=16% Similarity=0.128 Sum_probs=104.8
Q ss_pred CCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccc----cceee-ecCCEEEEEeCChHHHHHHHHHhcCCCEEE
Q 046427 145 APTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNK----YVGVS-LVGKTLAVMGFGKVGTEVARRAKGLGMNVI 219 (595)
Q Consensus 145 ~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~----~~g~~-l~gktvGIIGlG~IG~~vA~~l~~~G~~V~ 219 (595)
+.|-|-..|.|.+.+.++. ++...++|.... +.... -.=++|||||+|.||..+|..+...|++|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~---------a~~~~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~ 81 (460)
T 3k6j_A 11 STGENLYFQGSEVRSYLME---------AHSLAGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETF 81 (460)
T ss_dssp TTSGGGGGCBCHHHHHHHH---------TTCCTTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred ccccchhhhhHHHHHHHHh---------HHHhhccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEE
Confidence 3455555666666666665 223345676431 11111 122689999999999999999999999999
Q ss_pred EECCCCcH---------HHHHHcCC-------------c-ccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCce
Q 046427 220 AHDPYAQA---------DRARATGV-------------G-LVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGV 276 (595)
Q Consensus 220 ~~d~~~~~---------~~a~~~g~-------------~-~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~ga 276 (595)
+||++... +...+.|. . ..+++ .+++||+|+.|+|...+.+.-+-++....+++++
T Consensus 82 l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~a 160 (460)
T 3k6j_A 82 LVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKSTC 160 (460)
T ss_dssp EECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTC
T ss_pred EEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCC
Confidence 99987541 11223332 1 12564 6899999999999877665555455666799999
Q ss_pred EEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEcCC
Q 046427 277 RIVNVARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVTPH 331 (595)
Q Consensus 277 iliN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH 331 (595)
+|+..+.+ +....+.+.+... -...+++-|. |.+ .-+| +.++|+
T Consensus 161 IlasnTSs--l~i~~ia~~~~~p-~r~iG~Hffn--Pv~-~m~L-----vEIv~g 204 (460)
T 3k6j_A 161 IFGTNTSS--LDLNEISSVLRDP-SNLVGIHFFN--PAN-VIRL-----VEIIYG 204 (460)
T ss_dssp EEEECCSS--SCHHHHHTTSSSG-GGEEEEECCS--STT-TCCE-----EEEECC
T ss_pred EEEecCCC--hhHHHHHHhccCC-cceEEEEecc--hhh-hCCE-----EEEEeC
Confidence 99644333 3445666665432 2346777776 432 2233 556665
No 91
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.84 E-value=6e-09 Score=107.59 Aligned_cols=107 Identities=18% Similarity=0.222 Sum_probs=85.8
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccH--HH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFND--EA 268 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~--~~ 268 (595)
++|||||+|.||+.+|+.+...|++|.+||++.. .+...+.|+... ++++++++||+|++|+|....++.++.. ..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 6899999999999999999999999999998763 344455676543 7889999999999999966666666543 13
Q ss_pred HhcCCCceEEEeccCCchhcHHHHHHHHhcC
Q 046427 269 FFKMKKGVRIVNVARGGVVDEEALVRALDSG 299 (595)
Q Consensus 269 l~~mk~gailiN~arg~~vd~~aL~~aL~~g 299 (595)
+..++++.++||++++.....+.+.+.+...
T Consensus 111 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 141 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTVDADTVTELAQVIVSR 141 (316)
T ss_dssp GGGCCTTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 4668999999999998877777888888543
No 92
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.83 E-value=9.2e-09 Score=113.27 Aligned_cols=109 Identities=17% Similarity=0.196 Sum_probs=88.5
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHH-----cCCcc-cCHHHhccc---cCEEEEeCCCChhcc
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARA-----TGVGL-VSFEEAIST---ADFISLHMPLTPATS 261 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~-----~g~~~-~~l~ell~~---aD~V~l~~Plt~~t~ 261 (595)
.++|||||+|.||+.+|+.+...|++|.+||++.. .+...+ .|+.. .+++++++. ||+|++++|....++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 35899999999999999999999999999999873 333333 35543 378898877 999999999767788
Q ss_pred ccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 262 KMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 262 ~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
.++ .+....+++|.+|||++.+...+...+.+.+.+..+
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~ 128 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGI 128 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred HHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCC
Confidence 887 445677999999999999988788888888876433
No 93
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.83 E-value=5.9e-09 Score=104.70 Aligned_cols=102 Identities=19% Similarity=0.231 Sum_probs=79.9
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc---HHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ---ADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAF 269 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~---~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l 269 (595)
++|||||+|.||+.+|+.+...|++|++||+... .+...+.|+. .++++++++||+|++|+|.......+ .+..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~~ 77 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-ETSEEDVYSCPVVISAVTPGVALGAA--RRAG 77 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-ECCHHHHHTSSEEEECSCGGGHHHHH--HHHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc-CCHHHHHhcCCEEEEECCCHHHHHHH--HHHH
Confidence 3799999999999999999999999999988322 2333445776 77889999999999999965544443 3455
Q ss_pred hcCCCceEEEeccCCchhcHHHHHHHHhcC
Q 046427 270 FKMKKGVRIVNVARGGVVDEEALVRALDSG 299 (595)
Q Consensus 270 ~~mk~gailiN~arg~~vd~~aL~~aL~~g 299 (595)
..+++ ++||++.+...+.+.+.+.+...
T Consensus 78 ~~~~~--~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 78 RHVRG--IYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp TTCCS--EEEECSCCCHHHHHHHHHHCSSS
T ss_pred HhcCc--EEEEccCCCHHHHHHHHHHHhhC
Confidence 66776 99999988877778888888663
No 94
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.77 E-value=1.7e-08 Score=110.50 Aligned_cols=108 Identities=15% Similarity=0.164 Sum_probs=86.4
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHc----CCcc-cCHHHhccc---cCEEEEeCCCChhcccc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARAT----GVGL-VSFEEAIST---ADFISLHMPLTPATSKM 263 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~----g~~~-~~l~ell~~---aD~V~l~~Plt~~t~~l 263 (595)
++|||||+|.||+.+|+.+...|++|.+||++.. .+...+. |+.. .++++++++ +|+|++|+|....+..+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 5799999999999999999999999999998763 2223222 5543 378898876 99999999976677777
Q ss_pred ccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 264 FNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 264 i~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
+ .+....+++|.+||+++.|...+.+.+.+.+.+..+
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~ 122 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGI 122 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSC
T ss_pred H-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCC
Confidence 7 345567899999999999987788888888876544
No 95
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.76 E-value=1.2e-08 Score=107.92 Aligned_cols=106 Identities=21% Similarity=0.246 Sum_probs=85.7
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH--HHHHHcCCcccCHHHhcc-ccCEEEEeCCCChhcccccc
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA--DRARATGVGLVSFEEAIS-TADFISLHMPLTPATSKMFN 265 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g~~~~~l~ell~-~aD~V~l~~Plt~~t~~li~ 265 (595)
+|.||||+|+|+|+||+.+|++|.++|++|+++|++... +.+.+.+.+.++.++++. +||+++.|. +.++|+
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~ll~~~~DIvip~a-----~~~~I~ 244 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCA-----LGAVLN 244 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECS-----CSCCBS
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHHhccCCcEeeccc-----hHHHhC
Confidence 699999999999999999999999999999999987632 234445777778888887 899999874 667888
Q ss_pred HHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 266 DEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 266 ~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
.+.++.|+ ..+|++.+++.+.+++ ..+.|+++.+
T Consensus 245 ~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi 278 (364)
T 1leh_A 245 DFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGI 278 (364)
T ss_dssp TTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTC
T ss_pred HHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCC
Confidence 88888884 5689999999987755 4566666655
No 96
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.76 E-value=1.8e-08 Score=110.60 Aligned_cols=117 Identities=21% Similarity=0.155 Sum_probs=89.5
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHH-----cCCcc-cCHHHhcc---ccCEEEEeCCCChhccc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARA-----TGVGL-VSFEEAIS---TADFISLHMPLTPATSK 262 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~-----~g~~~-~~l~ell~---~aD~V~l~~Plt~~t~~ 262 (595)
++|||||+|.||+.+|..+...|++|.+||++.. .+...+ .|+.. .+++++++ ++|+|++|+|....+..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 4799999999999999999999999999999763 233333 45543 37888874 89999999997667777
Q ss_pred cccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCC
Q 046427 263 MFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFT 310 (595)
Q Consensus 263 li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~ 310 (595)
++. +....+++|.+||+++.|...+...+.+.+.+..+...+.-++.
T Consensus 83 vl~-~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g 129 (482)
T 2pgd_A 83 FIE-KLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSG 129 (482)
T ss_dssp HHH-HHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred HHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCC
Confidence 774 45567899999999999988777778888876444333333443
No 97
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.70 E-value=2e-08 Score=102.33 Aligned_cols=92 Identities=22% Similarity=0.374 Sum_probs=74.0
Q ss_pred CEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHh
Q 046427 193 KTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFF 270 (595)
Q Consensus 193 ktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~ 270 (595)
++|||||+ |.||+.+|+.+...|++|++||++.. .+...+.|+...++.+++++||+|++|+|.. .+..++ .+...
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~-~~~~v~-~~l~~ 89 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDN-IIEKVA-EDIVP 89 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHH-HHHHHH-HHHGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCch-HHHHHH-HHHHH
Confidence 58999999 99999999999999999999998753 3344456765557888999999999999954 356655 34445
Q ss_pred cCCCceEEEeccCCch
Q 046427 271 KMKKGVRIVNVARGGV 286 (595)
Q Consensus 271 ~mk~gailiN~arg~~ 286 (595)
.+++++++|+++.|..
T Consensus 90 ~l~~~~ivv~~s~~~~ 105 (286)
T 3c24_A 90 RVRPGTIVLILDAAAP 105 (286)
T ss_dssp GSCTTCEEEESCSHHH
T ss_pred hCCCCCEEEECCCCch
Confidence 6899999999888763
No 98
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.69 E-value=1.4e-08 Score=102.16 Aligned_cols=100 Identities=13% Similarity=0.156 Sum_probs=76.0
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCCE-EEEECCCCc-HHHH-HHcCCcc-cCHHHhccccCEEEEeCCCChhccc
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGMN-VIAHDPYAQ-ADRA-RATGVGL-VSFEEAISTADFISLHMPLTPATSK 262 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~-V~~~d~~~~-~~~a-~~~g~~~-~~l~ell~~aD~V~l~~Plt~~t~~ 262 (595)
..++.+++|||||+|.||+.+|+.+...|++ |.+||++.. .+.. ...|+.. .++++++++||+|++|+|.. ....
T Consensus 5 ~~~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~~ 83 (266)
T 3d1l_A 5 KRSIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFAE 83 (266)
T ss_dssp --CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHHH
T ss_pred hcCCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHHH
Confidence 3456678999999999999999999988998 899998753 2222 3336654 37889999999999999954 4455
Q ss_pred cccHHHHhcCCCceEEEeccCCchhc
Q 046427 263 MFNDEAFFKMKKGVRIVNVARGGVVD 288 (595)
Q Consensus 263 li~~~~l~~mk~gailiN~arg~~vd 288 (595)
++. +....+++++++|+++.|...+
T Consensus 84 v~~-~l~~~~~~~~ivv~~s~~~~~~ 108 (266)
T 3d1l_A 84 LLQ-GIVEGKREEALMVHTAGSIPMN 108 (266)
T ss_dssp HHH-HHHTTCCTTCEEEECCTTSCGG
T ss_pred HHH-HHHhhcCCCcEEEECCCCCchH
Confidence 553 3445688999999999987644
No 99
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.69 E-value=3.9e-08 Score=107.77 Aligned_cols=117 Identities=14% Similarity=0.179 Sum_probs=88.5
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHH-HcC-------Ccc-cCHHHhccc---cCEEEEeCCCChh
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRAR-ATG-------VGL-VSFEEAIST---ADFISLHMPLTPA 259 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~-~~g-------~~~-~~l~ell~~---aD~V~l~~Plt~~ 259 (595)
++|||||+|.||+.+|+.+...|++|.+||++.. .+... ..| +.. .+++++++. +|+|++|+|....
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 3699999999999999999999999999998753 22222 224 332 378888874 9999999997666
Q ss_pred ccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCC
Q 046427 260 TSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFT 310 (595)
Q Consensus 260 t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~ 310 (595)
+..++ ++....+++|.+||+++.|...+.+.+.+.+.+..+.....-|+.
T Consensus 82 v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~g 131 (478)
T 1pgj_A 82 TDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISG 131 (478)
T ss_dssp HHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEES
T ss_pred HHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccC
Confidence 77777 345567899999999999987788888888876544333333443
No 100
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.69 E-value=2.1e-08 Score=98.13 Aligned_cols=94 Identities=18% Similarity=0.245 Sum_probs=72.2
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHH
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAF 269 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l 269 (595)
.+++|+|||+|.||+.+|+.+...|++|.+||++.. .+...+.|+...+++++++++|+|++|+|. .....++. +
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~-~~~~~v~~---l 102 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFR-EHYSSLCS---L 102 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCG-GGSGGGGG---G
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCCh-HHHHHHHH---H
Confidence 457899999999999999999999999999998753 222333466555888999999999999994 44556653 3
Q ss_pred hcCCCceEEEeccCCchhc
Q 046427 270 FKMKKGVRIVNVARGGVVD 288 (595)
Q Consensus 270 ~~mk~gailiN~arg~~vd 288 (595)
..+.+++++|++++|.-.+
T Consensus 103 ~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 103 SDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp HHHHTTCEEEECCCCCHHH
T ss_pred HHhcCCCEEEEeCCCcccc
Confidence 3334799999999987543
No 101
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.69 E-value=3.5e-08 Score=107.88 Aligned_cols=134 Identities=16% Similarity=0.164 Sum_probs=91.1
Q ss_pred CEEEEEeCChHHHHHHHHHhcC--CCEEEEECCCCcH-HHH---------------HH----cCCcc-cCHHHhccccCE
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL--GMNVIAHDPYAQA-DRA---------------RA----TGVGL-VSFEEAISTADF 249 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~-~~a---------------~~----~g~~~-~~l~ell~~aD~ 249 (595)
++|+|||+|.||..+|..+... |++|++||++... +.. .. .++.. .++++.+++||+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 5899999999999999999877 8999999987532 211 01 13333 367888999999
Q ss_pred EEEeCCCChhcccc-----------c--cHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEe---cCCCCC
Q 046427 250 ISLHMPLTPATSKM-----------F--NDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALD---VFTEEP 313 (595)
Q Consensus 250 V~l~~Plt~~t~~l-----------i--~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lD---v~~~EP 313 (595)
|++|+|......+. . -+.....|++++++||+++..+-..+.+.+.+.+... .++| .+.+|+
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~--~~~d~~V~~~Pe~ 163 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTK--PNLNLQVLSNPEF 163 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCC--TTCEEEEEECCCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCC--CCCCeEEEeCHHH
Confidence 99999954433221 1 1234456899999999999887777778888876532 1123 356665
Q ss_pred CCCCc---ccccCCcEEE
Q 046427 314 PAKDS---KLVLHENVTV 328 (595)
Q Consensus 314 ~~~~~---~L~~~~nvil 328 (595)
..... .++..+++++
T Consensus 164 ~~~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 164 LAEGTAIKDLKNPDRVLI 181 (467)
T ss_dssp CCTTSHHHHHHSCSCEEE
T ss_pred hhcccchhhccCCCEEEE
Confidence 53333 2455566654
No 102
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.65 E-value=5.8e-07 Score=94.91 Aligned_cols=181 Identities=15% Similarity=0.116 Sum_probs=114.8
Q ss_pred CceEEEEcCCCCCCHHHHhccCCCceEEEEccccccccChhhHHhCCceEEeC---CCCC-----chHHHHHH--HHHHH
Q 046427 93 LCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDNVDLSAATEHGCLVVNA---PTAN-----TIAAAEHG--IALLT 162 (595)
Q Consensus 93 ~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~---p~~~-----~~~vAE~~--l~l~l 162 (595)
++|+|+ ....+...+.... .+++.++.-....++.-.++++.++|+...|. |.-. -.++++.+ ++.++
T Consensus 66 ~ad~i~-~vksP~~~~~~~~-~~g~~~~~y~~~~~~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~ 143 (361)
T 1pjc_A 66 SREMVV-KVKEPLPAEYDLM-QKDQLLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQF 143 (361)
T ss_dssp TSSEEE-CSSCCCGGGGGGC-CTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHH
T ss_pred cCCeEE-EECCCCHHHHHhh-cCCCEEEEEeccccCHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHH
Confidence 689865 3444554443332 34676666666666665577888899988754 4321 12333333 24444
Q ss_pred HHHHchHHHHHHHHcCc--ccccccceeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCcc--
Q 046427 163 AMARNIAQADASVKAGK--WQRNKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGL-- 237 (595)
Q Consensus 163 ~~~R~i~~~~~~~~~g~--W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~-- 237 (595)
... ++... ..|+ +.. .. ..+.++++.|+|.|.+|+.+++.++.+|++|+++|++.. .+.+.+.+...
T Consensus 144 gA~-nt~~~----~~g~G~~l~-~l--~~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~ 215 (361)
T 1pjc_A 144 GAR-FLERQ----QGGRGVLLG-GV--PGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVE 215 (361)
T ss_dssp HHH-HTSGG----GTSCCCCTT-CB--TTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSE
T ss_pred HHH-HHhhc----cCCCceecc-CC--CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeE
Confidence 332 21111 1121 111 01 137789999999999999999999999999999998763 23333333211
Q ss_pred ------cCHHHhccccCEEEEeCCCCh-hccccccHHHHhcCCCceEEEeccC
Q 046427 238 ------VSFEEAISTADFISLHMPLTP-ATSKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 238 ------~~l~ell~~aD~V~l~~Plt~-~t~~li~~~~l~~mk~gailiN~ar 283 (595)
.++.+.++.+|+|+.|++... .+..++.++.++.||++.+++|++-
T Consensus 216 ~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 216 LLYSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp EEECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred eeeCCHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 245677789999999997533 2345667888999999999999983
No 103
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.63 E-value=2.1e-07 Score=92.66 Aligned_cols=103 Identities=19% Similarity=0.265 Sum_probs=75.9
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCC----EEEEECCCCc-HHHH-HHcCCccc-CHHHhccccCEEEEeCCCChhcccccc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGM----NVIAHDPYAQ-ADRA-RATGVGLV-SFEEAISTADFISLHMPLTPATSKMFN 265 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~----~V~~~d~~~~-~~~a-~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~ 265 (595)
++|||||+|+||+.+|+.+...|+ +|.+||++.. .+.. .+.|+... ++.+++++||+|++|+|. .....++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~-~~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKP-DLYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCT-TTHHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCH-HHHHHHH-
Confidence 589999999999999999999998 9999999763 2333 34577654 789999999999999973 4455555
Q ss_pred HHHHhcCCCceEEEeccCCchhcHHHHHHHHhcC
Q 046427 266 DEAFFKMKKGVRIVNVARGGVVDEEALVRALDSG 299 (595)
Q Consensus 266 ~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g 299 (595)
++....++++.++|.+..|- ..+.+.+.+..+
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi--~~~~l~~~~~~~ 112 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGK--SIESTENAFNKK 112 (247)
T ss_dssp ---CCSSCTTCEEEECSCCS--CHHHHHHHHCSC
T ss_pred HHHHhhcCCCCEEEEecCCC--CHHHHHHHhCCC
Confidence 33445678898888665443 345666666543
No 104
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.62 E-value=5.1e-08 Score=95.06 Aligned_cols=81 Identities=17% Similarity=0.299 Sum_probs=63.1
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccH
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFND 266 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~ 266 (595)
..++.+++|+|||+|.||+.+|+.+...|++|.+||++.. .+++||+|++|+| .+.+..++..
T Consensus 14 ~~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~----------------~~~~aD~vi~av~-~~~~~~v~~~ 76 (209)
T 2raf_A 14 NLYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ----------------ATTLGEIVIMAVP-YPALAALAKQ 76 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC----------------CSSCCSEEEECSC-HHHHHHHHHH
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH----------------HhccCCEEEEcCC-cHHHHHHHHH
Confidence 3468899999999999999999999999999999998643 5678999999999 6667766643
Q ss_pred HHHhcCCCceEEEeccCCch
Q 046427 267 EAFFKMKKGVRIVNVARGGV 286 (595)
Q Consensus 267 ~~l~~mk~gailiN~arg~~ 286 (595)
....++ ++++|++++|--
T Consensus 77 -l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 77 -YATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp -THHHHT-TSEEEECCCCBC
T ss_pred -HHHhcC-CCEEEEECCCCC
Confidence 334577 999999998654
No 105
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.61 E-value=1.5e-07 Score=101.66 Aligned_cols=114 Identities=15% Similarity=0.096 Sum_probs=81.3
Q ss_pred ceeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHH------------------cCCcc-cCHHHhcc
Q 046427 186 VGVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARA------------------TGVGL-VSFEEAIS 245 (595)
Q Consensus 186 ~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~------------------~g~~~-~~l~ell~ 245 (595)
++++..-++|+|||+|.||..+|..+.. |++|++||++... +...+ .++.. .+++++++
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~ 108 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR 108 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh
Confidence 4566777799999999999999999988 9999999987632 22211 12333 36889999
Q ss_pred ccCEEEEeCCCChh-------cccccc--HHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 246 TADFISLHMPLTPA-------TSKMFN--DEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 246 ~aD~V~l~~Plt~~-------t~~li~--~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
+||+|++|+|...+ +..+.. +.... |++|+++|+.++..+-..+.+.+.+.+..+
T Consensus 109 ~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v 172 (432)
T 3pid_A 109 NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV 172 (432)
T ss_dssp TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE
T ss_pred CCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE
Confidence 99999999995421 111221 33445 899999999999888778888888877544
No 106
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.57 E-value=4.9e-07 Score=92.79 Aligned_cols=114 Identities=13% Similarity=0.134 Sum_probs=76.7
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHH-----------HHcC------------------Cc-ccCHH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRA-----------RATG------------------VG-LVSFE 241 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a-----------~~~g------------------~~-~~~l~ 241 (595)
++|+|||+|.||..+|..+...|++|++||++... +.+ .+.| +. ..+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 58999999999999999999999999999987522 211 1122 22 23678
Q ss_pred HhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcC-CeeEEEEecCC
Q 046427 242 EAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSG-IISQAALDVFT 310 (595)
Q Consensus 242 ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g-~i~ga~lDv~~ 310 (595)
+.+++||+|++++|...+.+.-+-++....++++++|+....+- ....+.+.+... ++ .+.+.+.
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i--~~~~l~~~~~~~~~~--~g~h~~~ 161 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSL--QITSIANATTRQDRF--AGLHFFN 161 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSS--CHHHHHTTSSCGGGE--EEEEECS
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCC--CHHHHHHhcCCcccE--EEEecCC
Confidence 88999999999999765443333344445678899888554443 334555555432 34 4555554
No 107
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.56 E-value=1.1e-07 Score=86.72 Aligned_cols=87 Identities=13% Similarity=0.161 Sum_probs=69.3
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH--HHHHHcCCc---ccCHHHhccccCEEEEeCCCChhccccccH
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA--DRARATGVG---LVSFEEAISTADFISLHMPLTPATSKMFND 266 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g~~---~~~l~ell~~aD~V~l~~Plt~~t~~li~~ 266 (595)
|++++|||.|.||+.+++.++.+|++|.+||++... ..+.+.+.. ..++.++++++|+|+.|+|.. ..++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~---~~~~~~ 97 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSK---TPIVEE 97 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCS---SCSBCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCC---CcEeeH
Confidence 889999999999999999999999999999987632 234555653 237889999999999999964 334444
Q ss_pred HHHhcCCCceEEEeccCC
Q 046427 267 EAFFKMKKGVRIVNVARG 284 (595)
Q Consensus 267 ~~l~~mk~gailiN~arg 284 (595)
+.+++|.+++|++..
T Consensus 98 ---~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 98 ---RSLMPGKLFIDLGNP 112 (144)
T ss_dssp ---GGCCTTCEEEECCSS
T ss_pred ---HHcCCCCEEEEccCC
Confidence 447889999999864
No 108
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.49 E-value=3.9e-07 Score=91.13 Aligned_cols=101 Identities=13% Similarity=0.204 Sum_probs=75.6
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHH-HHcCCccc-CHHHhccccCEEEEeCCCChhccccccHHHH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRA-RATGVGLV-SFEEAISTADFISLHMPLTPATSKMFNDEAF 269 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a-~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~~~l 269 (595)
++|||||+|.||+.+|+.+...|.+|.+||++... +.. ...|+... +++++++++|+|++|+| ...... .+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~~-----v~ 77 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFET-----VL 77 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHHH-----HH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHHH-----HH
Confidence 48999999999999999999999999999987632 222 23476644 78999999999999999 443333 34
Q ss_pred hcCCCceEEEeccCCchhcHHHHHHHHhcC-Ce
Q 046427 270 FKMKKGVRIVNVARGGVVDEEALVRALDSG-II 301 (595)
Q Consensus 270 ~~mk~gailiN~arg~~vd~~aL~~aL~~g-~i 301 (595)
..+++|.++|++..|-- .+.+.+.+..+ ++
T Consensus 78 ~~l~~~~~vv~~~~~~~--~~~l~~~~~~~~~~ 108 (259)
T 2ahr_A 78 KPLHFKQPIISMAAGIS--LQRLATFVGQDLPL 108 (259)
T ss_dssp TTSCCCSCEEECCTTCC--HHHHHHHHCTTSCE
T ss_pred HHhccCCEEEEeCCCCC--HHHHHHhcCCCCCE
Confidence 45678999999976543 34566666654 44
No 109
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.49 E-value=1.4e-07 Score=97.87 Aligned_cols=104 Identities=17% Similarity=0.275 Sum_probs=78.9
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCC----CEEEEECCCCc---HHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccc
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLG----MNVIAHDPYAQ---ADRARATGVGLV-SFEEAISTADFISLHMPLTPATSK 262 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G----~~V~~~d~~~~---~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~ 262 (595)
..++|||||+|.||+.+|..|...| .+|.+||++.. .+...+.|+... +..+++++||+|++|+| ......
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~~ 99 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIPF 99 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHHH
Confidence 3458999999999999999999888 78999998763 334456687654 78899999999999999 455666
Q ss_pred cccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhc
Q 046427 263 MFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDS 298 (595)
Q Consensus 263 li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~ 298 (595)
++. +....++++.+||+++-|-- .+.+.+.+.+
T Consensus 100 vl~-~l~~~l~~~~ivvs~s~gi~--~~~l~~~l~~ 132 (322)
T 2izz_A 100 ILD-EIGADIEDRHIVVSCAAGVT--ISSIEKKLSA 132 (322)
T ss_dssp HHH-HHGGGCCTTCEEEECCTTCC--HHHHHHHHHT
T ss_pred HHH-HHHhhcCCCCEEEEeCCCCC--HHHHHHHHhh
Confidence 553 34456888999999976543 3445566654
No 110
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.47 E-value=5.1e-07 Score=99.02 Aligned_cols=116 Identities=22% Similarity=0.234 Sum_probs=80.4
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHH-----------cCC-------------cc-cCHHHhccc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARA-----------TGV-------------GL-VSFEEAIST 246 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~-----------~g~-------------~~-~~l~ell~~ 246 (595)
++|||||+|.||+.+|..+...|++|++||++.. .+.+.+ .|. .. .+++ .+++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~~ 84 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALAA 84 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-HhcC
Confidence 5899999999999999999999999999998763 222211 221 11 2454 6899
Q ss_pred cCEEEEeCCCChhccccccHHHHhcCCCceEE-EeccCCchhcHHHHHHHHhcCCeeEEEEecCCCCC
Q 046427 247 ADFISLHMPLTPATSKMFNDEAFFKMKKGVRI-VNVARGGVVDEEALVRALDSGIISQAALDVFTEEP 313 (595)
Q Consensus 247 aD~V~l~~Plt~~t~~li~~~~l~~mk~gail-iN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP 313 (595)
||+|+.|+|...+.+.-+-++....++++++| +|+|.-.+ ..+.+.+... -...+++.|.+-|
T Consensus 85 aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i---~~ia~~~~~p-~~~ig~hf~~Pa~ 148 (483)
T 3mog_A 85 ADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISI---TAIAAEIKNP-ERVAGLHFFNPAP 148 (483)
T ss_dssp CSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH---HHHTTTSSSG-GGEEEEEECSSTT
T ss_pred CCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCH---HHHHHHccCc-cceEEeeecChhh
Confidence 99999999977655544444556678999999 57765443 4555555432 2246777776443
No 111
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.46 E-value=2.1e-07 Score=92.23 Aligned_cols=70 Identities=10% Similarity=0.152 Sum_probs=57.4
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhc
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFK 271 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~ 271 (595)
.++|||||+|+||.++|+.|+..|++|.+||+. ++ +++|| ++|+|.. ....++ .+....
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~----------------~~-~~~aD--ilavP~~-ai~~vl-~~l~~~ 64 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP----------------ED-IRDFE--LVVIDAH-GVEGYV-EKLSAF 64 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG----------------GG-GGGCS--EEEECSS-CHHHHH-HHHHTT
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH----------------HH-hccCC--EEEEcHH-HHHHHH-HHHHHh
Confidence 368999999999999999999999999999972 22 57899 8999965 566665 344556
Q ss_pred CCCceEEEecc
Q 046427 272 MKKGVRIVNVA 282 (595)
Q Consensus 272 mk~gailiN~a 282 (595)
+++|+++++++
T Consensus 65 l~~g~ivvd~s 75 (232)
T 3dfu_A 65 ARRGQMFLHTS 75 (232)
T ss_dssp CCTTCEEEECC
T ss_pred cCCCCEEEEEC
Confidence 89999999985
No 112
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.44 E-value=2e-07 Score=93.23 Aligned_cols=103 Identities=19% Similarity=0.231 Sum_probs=74.3
Q ss_pred CEEEEEeCChHHHHHHHHHhcCC-CEEEEECCCCc-HHHHH-HcCCccc-CHHHhccccCEEEEeCCCChhccccccHHH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLG-MNVIAHDPYAQ-ADRAR-ATGVGLV-SFEEAISTADFISLHMPLTPATSKMFNDEA 268 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G-~~V~~~d~~~~-~~~a~-~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~~~ 268 (595)
++|||||+|.||+.+|+.+...| .+|.+||++.. .+... ..|+... ++++++ +||+|++|+| ......++..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~~~-- 76 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAACKN-- 76 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHHTT--
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHHHH--
Confidence 37999999999999999999889 99999998753 23333 3476543 677888 9999999999 5555544431
Q ss_pred HhcCCCceEEEeccCCchhcHHHHHHHHhcC-CeeE
Q 046427 269 FFKMKKGVRIVNVARGGVVDEEALVRALDSG-IISQ 303 (595)
Q Consensus 269 l~~mk~gailiN~arg~~vd~~aL~~aL~~g-~i~g 303 (595)
+.. + +.++|+++.|-- .+.+.+.+..+ ++..
T Consensus 77 l~~-~-~~ivv~~~~g~~--~~~l~~~~~~~~~~v~ 108 (263)
T 1yqg_A 77 IRT-N-GALVLSVAAGLS--VGTLSRYLGGTRRIVR 108 (263)
T ss_dssp CCC-T-TCEEEECCTTCC--HHHHHHHTTSCCCEEE
T ss_pred hcc-C-CCEEEEecCCCC--HHHHHHHcCCCCcEEE
Confidence 222 4 899999965543 36677777764 4533
No 113
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.44 E-value=7e-07 Score=90.94 Aligned_cols=109 Identities=14% Similarity=0.143 Sum_probs=80.7
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCC---EEEEECCCCc-HHHHHH-cCCccc-CHHHhccccCEEEEeCCCChhcccccc
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGM---NVIAHDPYAQ-ADRARA-TGVGLV-SFEEAISTADFISLHMPLTPATSKMFN 265 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~---~V~~~d~~~~-~~~a~~-~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~ 265 (595)
.++|||||+|+||+.+|+.+...|+ +|.+||++.. .+...+ .|+... +..+++++||+|++|+|. .....++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl~ 81 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVCE 81 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHHH
Confidence 4689999999999999999998888 8999999873 333333 477654 789999999999999983 44555553
Q ss_pred HHHHhc-CCCceEEEeccCCchhcHHHHHHHHhcC-CeeEE
Q 046427 266 DEAFFK-MKKGVRIVNVARGGVVDEEALVRALDSG-IISQA 304 (595)
Q Consensus 266 ~~~l~~-mk~gailiN~arg~~vd~~aL~~aL~~g-~i~ga 304 (595)
+.-.. ++++.+||.++-|- ..+.+.+.+..+ ++.++
T Consensus 82 -~l~~~~l~~~~iiiS~~agi--~~~~l~~~l~~~~~vvr~ 119 (280)
T 3tri_A 82 -ELKDILSETKILVISLAVGV--TTPLIEKWLGKASRIVRA 119 (280)
T ss_dssp -HHHHHHHTTTCEEEECCTTC--CHHHHHHHHTCCSSEEEE
T ss_pred -HHHhhccCCCeEEEEecCCC--CHHHHHHHcCCCCeEEEE
Confidence 23334 68888888876553 456777777653 55444
No 114
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.41 E-value=6.3e-07 Score=97.47 Aligned_cols=105 Identities=22% Similarity=0.227 Sum_probs=75.9
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHH-------------------cC-Ccc-cCHHHhccccCEE
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARA-------------------TG-VGL-VSFEEAISTADFI 250 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-------------------~g-~~~-~~l~ell~~aD~V 250 (595)
++|+|||+|.||..+|..+...|++|++||++... +...+ .+ +.. .++++++++||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 58999999999999999999999999999987632 22221 11 222 3688899999999
Q ss_pred EEeCCCCh---------hccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhc
Q 046427 251 SLHMPLTP---------ATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDS 298 (595)
Q Consensus 251 ~l~~Plt~---------~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~ 298 (595)
++|+|... ..+..+ +.....++++.++|+++.-.+-..+.+.+.+.+
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99999542 233333 345566899999999997554445555555543
No 115
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.39 E-value=1.9e-06 Score=94.06 Aligned_cols=114 Identities=18% Similarity=0.249 Sum_probs=76.1
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHH-----------cC-----------Cc-ccCHHHhcccc
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARA-----------TG-----------VG-LVSFEEAISTA 247 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~-----------~g-----------~~-~~~l~ell~~a 247 (595)
=++|+|||+|.||..+|..+...|++|++||++.. .+.+.+ .| .. ..++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 35899999999999999999999999999998752 222111 11 01 1256 568899
Q ss_pred CEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhc-CCeeEEEEecCC
Q 046427 248 DFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDS-GIISQAALDVFT 310 (595)
Q Consensus 248 D~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~-g~i~ga~lDv~~ 310 (595)
|+|+.|+|...+.+.-+-++....++++++|+....+ + ....+.+.+.. .++ .+++.|.
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~-~-~~~~la~~~~~~~~~--ig~hf~~ 175 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA-L-NVDDIASSTDRPQLV--IGTHFFS 175 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS-S-CHHHHHTTSSCGGGE--EEEEECS
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC-c-CHHHHHHHhcCCcce--EEeecCC
Confidence 9999999965443333334445568999999874333 3 33466666643 234 5566663
No 116
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.37 E-value=1e-06 Score=95.64 Aligned_cols=105 Identities=18% Similarity=0.209 Sum_probs=76.6
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHH-------------------cC-Ccc-cCHHHhccccCEE
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARA-------------------TG-VGL-VSFEEAISTADFI 250 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-------------------~g-~~~-~~l~ell~~aD~V 250 (595)
-+++|||+|.+|..+|..+...|++|++||++... +...+ .+ +.. .++.+.+++||+|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvv 88 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAV 88 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEE
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEE
Confidence 37999999999999999999999999999987643 22211 11 222 3788999999999
Q ss_pred EEeCCCChh----------ccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhc
Q 046427 251 SLHMPLTPA----------TSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDS 298 (595)
Q Consensus 251 ~l~~Plt~~----------t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~ 298 (595)
++|+|...+ .+..+ +.....|++|.++|++|.-.+-..+.+.+.+.+
T Consensus 89 ii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e 145 (446)
T 4a7p_A 89 FIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAE 145 (446)
T ss_dssp EECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 999984321 22222 345667999999999997655456666666554
No 117
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.36 E-value=5.9e-07 Score=97.22 Aligned_cols=105 Identities=17% Similarity=0.228 Sum_probs=76.1
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHH-------------------cC-Ccc-cCHHHhccccCEE
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARA-------------------TG-VGL-VSFEEAISTADFI 250 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-------------------~g-~~~-~~l~ell~~aD~V 250 (595)
++|+|||+|.||..+|..+...|++|++||++... +...+ .| +.. .++++++++||+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 37999999999999999999999999999987532 22222 22 222 3678889999999
Q ss_pred EEeCCCChh---------ccccccHHHHhcCCC---ceEEEeccCCchhc-HHHHHHHHhc
Q 046427 251 SLHMPLTPA---------TSKMFNDEAFFKMKK---GVRIVNVARGGVVD-EEALVRALDS 298 (595)
Q Consensus 251 ~l~~Plt~~---------t~~li~~~~l~~mk~---gailiN~arg~~vd-~~aL~~aL~~ 298 (595)
++|+|.... ....+ +.....|++ +.++|+++...+-. .+.+.+.+.+
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999995443 33333 333445788 99999998776655 5666666655
No 118
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.35 E-value=9.4e-07 Score=91.44 Aligned_cols=90 Identities=19% Similarity=0.152 Sum_probs=69.8
Q ss_pred cCCEEEEEeCChHHHHHHHHHhc-CCC-EEEEECCCCcH--HHHHHcC--Ccc-cCHHHhccccCEEEEeCCCChhcccc
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKG-LGM-NVIAHDPYAQA--DRARATG--VGL-VSFEEAISTADFISLHMPLTPATSKM 263 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~-~G~-~V~~~d~~~~~--~~a~~~g--~~~-~~l~ell~~aD~V~l~~Plt~~t~~l 263 (595)
..++|||||+|.||+.+++.+.. +|. +|.+||++... ..+...+ +.. .++++++++||+|++|+|. +..+
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~---~~~v 210 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLA---TEPI 210 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCC---SSCC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCC---CCcc
Confidence 46799999999999999999875 486 89999997632 2233435 543 4799999999999999994 3556
Q ss_pred ccHHHHhcCCCceEEEeccCCch
Q 046427 264 FNDEAFFKMKKGVRIVNVARGGV 286 (595)
Q Consensus 264 i~~~~l~~mk~gailiN~arg~~ 286 (595)
+.. ..+++|.++++++....
T Consensus 211 ~~~---~~l~~g~~vi~~g~~~p 230 (312)
T 2i99_A 211 LFG---EWVKPGAHINAVGASRP 230 (312)
T ss_dssp BCG---GGSCTTCEEEECCCCST
T ss_pred cCH---HHcCCCcEEEeCCCCCC
Confidence 654 46899999999976554
No 119
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.30 E-value=1.1e-06 Score=87.69 Aligned_cols=98 Identities=18% Similarity=0.198 Sum_probs=70.9
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCC----CEEEEECCCCcHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccH
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLG----MNVIAHDPYAQADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFND 266 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G----~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~ 266 (595)
.++|||||+|.||+.+|+.+...| .+|.+||++... .|+... ++.+++++||+|++|+| ......++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-----~g~~~~~~~~~~~~~~D~vi~~v~-~~~~~~v~~- 76 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-----TTLNYMSSNEELARHCDIIVCAVK-PDIAGSVLN- 76 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-----SSSEECSCHHHHHHHCSEEEECSC-TTTHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-----CceEEeCCHHHHHhcCCEEEEEeC-HHHHHHHHH-
Confidence 358999999999999999999888 689999987643 466554 78899999999999999 455555553
Q ss_pred HHHhcCCCceEEEeccCCchhcHHHHHHHHhcC
Q 046427 267 EAFFKMKKGVRIVNVARGGVVDEEALVRALDSG 299 (595)
Q Consensus 267 ~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g 299 (595)
+....++++.++++++.- +.+.+.+.+..+
T Consensus 77 ~l~~~l~~~~vv~~~~gi---~~~~l~~~~~~~ 106 (262)
T 2rcy_A 77 NIKPYLSSKLLISICGGL---NIGKLEEMVGSE 106 (262)
T ss_dssp HSGGGCTTCEEEECCSSC---CHHHHHHHHCTT
T ss_pred HHHHhcCCCEEEEECCCC---CHHHHHHHhCCC
Confidence 233445555555555433 334566666654
No 120
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.29 E-value=7.4e-07 Score=86.15 Aligned_cols=114 Identities=16% Similarity=0.205 Sum_probs=80.2
Q ss_pred CEEEEEe-CChHHHHHHHHHhcCCCEEEEECCCCcH-HHH-HHcC-------CcccCHHHhccccCEEEEeCCCChhccc
Q 046427 193 KTLAVMG-FGKVGTEVARRAKGLGMNVIAHDPYAQA-DRA-RATG-------VGLVSFEEAISTADFISLHMPLTPATSK 262 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a-~~~g-------~~~~~l~ell~~aD~V~l~~Plt~~t~~ 262 (595)
++|+|+| .|.||+.+|+.+...|++|.++|++... +.. ...+ +...+++++++++|+|++|+| ...+..
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~-~~~~~~ 79 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIP-WEHAID 79 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSC-HHHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCC-hhhHHH
Confidence 3799999 9999999999999999999999987532 211 1112 333468888999999999999 444555
Q ss_pred cccHHHHhcCCCceEEEeccCCchhc------------HHHHHHHHhcCCeeEEEEecCCCCC
Q 046427 263 MFNDEAFFKMKKGVRIVNVARGGVVD------------EEALVRALDSGIISQAALDVFTEEP 313 (595)
Q Consensus 263 li~~~~l~~mk~gailiN~arg~~vd------------~~aL~~aL~~g~i~ga~lDv~~~EP 313 (595)
++. +....++ +.++++++.|--.+ .+.+.+.+...++ ++.+.+.|
T Consensus 80 ~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~~~~----v~~~~~~~ 136 (212)
T 1jay_A 80 TAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESEKV----VSALHTIP 136 (212)
T ss_dssp HHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTCSCE----EECCTTCC
T ss_pred HHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCCCeE----EEEccchH
Confidence 543 2223454 89999999865421 5677777764443 46666665
No 121
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.29 E-value=3.1e-06 Score=90.64 Aligned_cols=106 Identities=13% Similarity=0.107 Sum_probs=77.5
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHHcCC------------------cc-cCHHHhccccCEEEE
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARATGV------------------GL-VSFEEAISTADFISL 252 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~------------------~~-~~l~ell~~aD~V~l 252 (595)
++|+|||+|.||..+|..+.. |++|++||++... +...+.+. .. .++.+.+++||+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 379999999999999999999 9999999987532 22222232 11 256788899999999
Q ss_pred eCCCCh----------hccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 253 HMPLTP----------ATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 253 ~~Plt~----------~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
|+|... .....+ +.... ++++.++|+.+.-++-..+.+.+.+....+
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~~v 136 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTDRI 136 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCSCE
T ss_pred ecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCCeE
Confidence 999652 133333 23444 899999999887777667778887766544
No 122
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.28 E-value=2e-06 Score=89.70 Aligned_cols=103 Identities=22% Similarity=0.226 Sum_probs=73.2
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHc-CC---------------cccCHHHhccccCEEEEeCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARAT-GV---------------GLVSFEEAISTADFISLHMP 255 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~-g~---------------~~~~l~ell~~aD~V~l~~P 255 (595)
++|+|||+|.||+.+|..+...|++|.+||++.. .+...+. ++ ...+++++++++|+|++|+|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 5899999999999999999999999999998753 2333333 21 12378888999999999999
Q ss_pred CChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhc
Q 046427 256 LTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDS 298 (595)
Q Consensus 256 lt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~ 298 (595)
... +..++ +.....+++++++|++ .|-......+.+.+..
T Consensus 85 ~~~-~~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 85 AIH-HASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp GGG-HHHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred chH-HHHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 544 45555 3445568999999999 4412233334444443
No 123
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.28 E-value=5.4e-06 Score=84.20 Aligned_cols=81 Identities=21% Similarity=0.295 Sum_probs=68.6
Q ss_pred eeeecCCEEEEEeCCh-HHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhcccccc
Q 046427 187 GVSLVGKTLAVMGFGK-VGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFN 265 (595)
Q Consensus 187 g~~l~gktvGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~ 265 (595)
+.++.||++.|||.|. +|+.+|..|...|++|..++++. .++.+.+++||+|+.++|. .+++.
T Consensus 155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t------------~~L~~~~~~ADIVI~Avg~----p~~I~ 218 (285)
T 3p2o_A 155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT------------KDLSLYTRQADLIIVAAGC----VNLLR 218 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHTTCSEEEECSSC----TTCBC
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc------------hhHHHHhhcCCEEEECCCC----CCcCC
Confidence 5689999999999988 69999999999999999998642 2688999999999999983 34576
Q ss_pred HHHHhcCCCceEEEeccCCch
Q 046427 266 DEAFFKMKKGVRIVNVARGGV 286 (595)
Q Consensus 266 ~~~l~~mk~gailiN~arg~~ 286 (595)
.+. +|+|+++||++.-.+
T Consensus 219 ~~~---vk~GavVIDVgi~~~ 236 (285)
T 3p2o_A 219 SDM---VKEGVIVVDVGINRL 236 (285)
T ss_dssp GGG---SCTTEEEEECCCEEC
T ss_pred HHH---cCCCeEEEEeccCcc
Confidence 654 599999999996554
No 124
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.26 E-value=1.1e-06 Score=89.64 Aligned_cols=107 Identities=19% Similarity=0.211 Sum_probs=75.9
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCcc-------------cCHHHhcc---ccCEEEEeCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGL-------------VSFEEAIS---TADFISLHMP 255 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~-------------~~l~ell~---~aD~V~l~~P 255 (595)
++|+|||+|.||+.+|..+...|.+|.+||++.. .+...+.|+.. .+.+++.+ ++|+|++|+|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 4899999999999999999999999999998752 33333434321 13445554 8999999999
Q ss_pred CChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCee
Q 046427 256 LTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIIS 302 (595)
Q Consensus 256 lt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ 302 (595)
. ..+..++. .....++++.++|+++.| +-..+.+.+.+...++.
T Consensus 84 ~-~~~~~v~~-~l~~~l~~~~~iv~~~~g-~~~~~~l~~~~~~~~vi 127 (316)
T 2ew2_A 84 A-QQLDAMFK-AIQPMITEKTYVLCLLNG-LGHEDVLEKYVPKENIL 127 (316)
T ss_dssp H-HHHHHHHH-HHGGGCCTTCEEEECCSS-SCTHHHHTTTSCGGGEE
T ss_pred c-ccHHHHHH-HHHHhcCCCCEEEEecCC-CCcHHHHHHHcCCccEE
Confidence 4 45555553 344568899999999864 32346666666655554
No 125
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.26 E-value=1.9e-06 Score=94.31 Aligned_cols=105 Identities=18% Similarity=0.141 Sum_probs=72.4
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHHc-------C-------------Ccc-cCHHHhccccCE
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARAT-------G-------------VGL-VSFEEAISTADF 249 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~-------g-------------~~~-~~l~ell~~aD~ 249 (595)
..+|+|||+|.||..+|..+...|++|++||++... +...+. | +.. .++++.+++||+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 358999999999999999999999999999987532 222221 1 112 257788899999
Q ss_pred EEEeCCCC---------hhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHh
Q 046427 250 ISLHMPLT---------PATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALD 297 (595)
Q Consensus 250 V~l~~Plt---------~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~ 297 (595)
|++|+|.. ...+..+ +.....+++++++|+.+...+=..+.+.+.+.
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~ 143 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVA 143 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHH
T ss_pred EEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHH
Confidence 99999942 2333333 33445689999999998533333444444443
No 126
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=98.23 E-value=2.3e-06 Score=82.90 Aligned_cols=72 Identities=11% Similarity=0.166 Sum_probs=60.5
Q ss_pred cEEEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCC---cEEEEEEcCCCCcHHHHHHHhcCCCcceEEEE
Q 046427 522 SIILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQK---QAVMTIGVDEEPSREVLKKIGETPAIEEFVFL 593 (595)
Q Consensus 522 ~~Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~---~al~vi~~d~~~~~e~l~~L~~~~~v~~v~~i 593 (595)
-.|.+.+.|+||+++.|++.|+++++||.+|+..+..+|+ .|.+.+++++...++++++|+++++|.+|+.+
T Consensus 5 VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d~~Le~LL~kLrkI~gV~~V~Rv 79 (223)
T 1y7p_A 5 RGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGGDFEKILERVKTFDYIIEIEEE 79 (223)
T ss_dssp EEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSSCHHHHHHHHHTCTTEEEEEEE
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECCCCHHHHHHHHhCCCCeeEEEEE
Confidence 3578889999999999999999999999999998876443 68888999999666999999999999999876
No 127
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.23 E-value=1.8e-06 Score=84.54 Aligned_cols=108 Identities=16% Similarity=0.225 Sum_probs=74.6
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEE-ECCCCcH-H-HHHHcCCcc-cCHHHhccccCEEEEeCCCChhccccccHHH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIA-HDPYAQA-D-RARATGVGL-VSFEEAISTADFISLHMPLTPATSKMFNDEA 268 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~-~d~~~~~-~-~a~~~g~~~-~~l~ell~~aD~V~l~~Plt~~t~~li~~~~ 268 (595)
++|+|||+|.||+.+|+.+...|++|.+ ||++... + .+.+.|+.. .+..+.+++||+|++|+|. .....++..
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~-~~~~~v~~~-- 100 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPY-DSIADIVTQ-- 100 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCG-GGHHHHHTT--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCCh-HHHHHHHHH--
Confidence 6899999999999999999999999999 9987632 2 234456543 3556678999999999993 334433322
Q ss_pred HhcCCCceEEEeccCCch------------hcHHHHHHHHhcCCeeEE
Q 046427 269 FFKMKKGVRIVNVARGGV------------VDEEALVRALDSGIISQA 304 (595)
Q Consensus 269 l~~mk~gailiN~arg~~------------vd~~aL~~aL~~g~i~ga 304 (595)
+.. .++.++|+++-|-- ...+.+.+.+...++..+
T Consensus 101 l~~-~~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~~vv~~ 147 (220)
T 4huj_A 101 VSD-WGGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGAKVVKA 147 (220)
T ss_dssp CSC-CTTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTCEEEEE
T ss_pred hhc-cCCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCCCEEEC
Confidence 222 35789999985431 145666677765555333
No 128
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.21 E-value=1.7e-06 Score=89.34 Aligned_cols=90 Identities=14% Similarity=0.208 Sum_probs=67.7
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECC--CCc-HHHHHHcCC-----------ccc---CHHHhccccCEEEEeCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDP--YAQ-ADRARATGV-----------GLV---SFEEAISTADFISLHMP 255 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~--~~~-~~~a~~~g~-----------~~~---~l~ell~~aD~V~l~~P 255 (595)
++|+|||+|.||+.+|..+...|.+|.+||+ +.. .+...+.+. ... ++.+.+++||+|++|+|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 3799999999999999999988999999998 542 233333332 222 56788899999999999
Q ss_pred CChhccccccHHHHhcCCCceEEEeccCCc
Q 046427 256 LTPATSKMFNDEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 256 lt~~t~~li~~~~l~~mk~gailiN~arg~ 285 (595)
.. .+..++. .... ++++.++|+++.|-
T Consensus 81 ~~-~~~~v~~-~i~~-l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 81 TD-GVLPVMS-RILP-YLKDQYIVLISKGL 107 (335)
T ss_dssp GG-GHHHHHH-HHTT-TCCSCEEEECCCSE
T ss_pred hH-HHHHHHH-HHhc-CCCCCEEEEEcCcC
Confidence 54 4555553 3345 78899999998764
No 129
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.20 E-value=4e-06 Score=96.18 Aligned_cols=113 Identities=16% Similarity=0.237 Sum_probs=77.4
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHH-----------HHcCC-------------cc-cCHHHhccc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRA-----------RATGV-------------GL-VSFEEAIST 246 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a-----------~~~g~-------------~~-~~l~ell~~ 246 (595)
++|||||+|.||..+|..+...|++|++||++... +.+ .+.|. .. .++ +.+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 393 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFGN 393 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGGG
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHCC
Confidence 57999999999999999999999999999987521 211 11231 11 245 67899
Q ss_pred cCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcC-CeeEEEEecCC
Q 046427 247 ADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSG-IISQAALDVFT 310 (595)
Q Consensus 247 aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g-~i~ga~lDv~~ 310 (595)
||+|+.|+|...+.+.-+-.+....++++++|+..+.+- ....+.+.+... ++ .+++.|.
T Consensus 394 aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl--~i~~la~~~~~~~~~--ig~hf~~ 454 (715)
T 1wdk_A 394 VDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTI--SISLLAKALKRPENF--VGMHFFN 454 (715)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSS--CHHHHGGGCSCGGGE--EEEECCS
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCC--CHHHHHHHhcCccce--EEEEccC
Confidence 999999999776655544445556789999997443332 334555555332 34 5666665
No 130
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.20 E-value=2.3e-06 Score=90.24 Aligned_cols=105 Identities=19% Similarity=0.197 Sum_probs=76.4
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCC--------------cc-cCHHHhccccCEEEEeCC
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGV--------------GL-VSFEEAISTADFISLHMP 255 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~--------------~~-~~l~ell~~aD~V~l~~P 255 (595)
-++|+|||.|.+|..+|..+...|.+|..||++.. .+...+.+. .. .++++.+++||+|++++|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp 108 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVP 108 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCC
Confidence 46899999999999999999999999999998753 233333221 12 378899999999999999
Q ss_pred CChhccccccHHHHhcCCCceEEEeccCCchhcH----HHHHHHHhc
Q 046427 256 LTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDE----EALVRALDS 298 (595)
Q Consensus 256 lt~~t~~li~~~~l~~mk~gailiN~arg~~vd~----~aL~~aL~~ 298 (595)
. ...+.++ ++....+++++++|++..|-..+. +.+.+.+..
T Consensus 109 ~-~~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~ 153 (356)
T 3k96_A 109 S-FAFHEVI-TRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQ 153 (356)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCS
T ss_pred H-HHHHHHH-HHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCC
Confidence 4 4455555 334556889999999987654432 344555543
No 131
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.17 E-value=5e-06 Score=89.72 Aligned_cols=107 Identities=20% Similarity=0.239 Sum_probs=73.9
Q ss_pred ecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCc---ccCHHHh---------------ccccCEEE
Q 046427 190 LVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVG---LVSFEEA---------------ISTADFIS 251 (595)
Q Consensus 190 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~---~~~l~el---------------l~~aD~V~ 251 (595)
-+|.++.|||+|.+|..+|..+...|++|++||++...-.....|.. ...++++ +++||+|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 46889999999999999999999999999999997643222222311 1134433 45799999
Q ss_pred EeCCCChhc--------ccccc--HHHHhcCCCceEEEeccCCchhcHHHHHHHH
Q 046427 252 LHMPLTPAT--------SKMFN--DEAFFKMKKGVRIVNVARGGVVDEEALVRAL 296 (595)
Q Consensus 252 l~~Plt~~t--------~~li~--~~~l~~mk~gailiN~arg~~vd~~aL~~aL 296 (595)
+|+|..... ..+.. +.....|++|.++|+.|.-.+-..+.+.+.+
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i 143 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPV 143 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHH
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHH
Confidence 999954321 11322 3456679999999999987776667766653
No 132
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.15 E-value=3.5e-06 Score=92.38 Aligned_cols=105 Identities=14% Similarity=0.084 Sum_probs=74.0
Q ss_pred CEEEEEeCChHHHHHHHHHhcC--CCEEEEECCCCcH-HHHHHc-------------------CCcc-cCHHHhccccCE
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL--GMNVIAHDPYAQA-DRARAT-------------------GVGL-VSFEEAISTADF 249 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~-~~a~~~-------------------g~~~-~~l~ell~~aD~ 249 (595)
++|+|||+|.||..+|..+... |++|++||++... +...+. ++.. .++.+.+++||+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 5899999999999999999866 7999999986532 211110 1222 256788899999
Q ss_pred EEEeCCCChh--------------ccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhc
Q 046427 250 ISLHMPLTPA--------------TSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDS 298 (595)
Q Consensus 250 V~l~~Plt~~--------------t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~ 298 (595)
|++|+|.... ....+ +.....++++.++|+++.-.+-..+.+.+.+.+
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~-~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVS-RTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEecCCccccccccccCCCcHHHHHHHH-HHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 9999985331 11111 334567999999999987665556667777765
No 133
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.15 E-value=8.4e-06 Score=93.64 Aligned_cols=113 Identities=13% Similarity=0.107 Sum_probs=75.8
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHH-----------cCC-------------cc-cCHHHhccc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARA-----------TGV-------------GL-VSFEEAIST 246 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-----------~g~-------------~~-~~l~ell~~ 246 (595)
++|||||+|.||..+|..+...|++|++||++... +.+.+ .|. .. .++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 57999999999999999999999999999987521 21111 121 11 245 57899
Q ss_pred cCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhc-CCeeEEEEecCC
Q 046427 247 ADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDS-GIISQAALDVFT 310 (595)
Q Consensus 247 aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~-g~i~ga~lDv~~ 310 (595)
||+|+.|+|...+.+.-+-.+....++++++|+..+.+- ....+.+.+.. .++ .+++.|.
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl--~i~~la~~~~~p~~~--iG~hf~~ 452 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTI--DLNKIGERTKSQDRI--VGAHFFS 452 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHTTTCSCTTTE--EEEEECS
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCC--CHHHHHHHhcCCCCE--EEecCCC
Confidence 999999999776555444445556789999986443332 33445555533 244 5666665
No 134
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.13 E-value=9.7e-07 Score=92.92 Aligned_cols=91 Identities=18% Similarity=0.200 Sum_probs=68.2
Q ss_pred EEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcC--------------Ccc-cCHHHhccccCEEEEeCCCC
Q 046427 194 TLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATG--------------VGL-VSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g--------------~~~-~~l~ell~~aD~V~l~~Plt 257 (595)
+|+|||+|.||..+|..|...|++|.+||++.. .+...+.+ +.. .++++++++||+|++|+|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 899999999999999999999999999998752 23233322 222 3688889999999999994
Q ss_pred hhccccccHH---HHhcCCC-ceEEEeccCCc
Q 046427 258 PATSKMFNDE---AFFKMKK-GVRIVNVARGG 285 (595)
Q Consensus 258 ~~t~~li~~~---~l~~mk~-gailiN~arg~ 285 (595)
.....++... ....+++ ++++|+++.|-
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi 127 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGI 127 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSC
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEECCcC
Confidence 5556555331 3345677 89999998764
No 135
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.13 E-value=2.8e-06 Score=88.69 Aligned_cols=92 Identities=16% Similarity=0.177 Sum_probs=68.4
Q ss_pred CEEEEEeCChHHHHHHHHHhcCC-------CEEEEECCCCc-----H-HHHHHc--------------CCcc-cCHHHhc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLG-------MNVIAHDPYAQ-----A-DRARAT--------------GVGL-VSFEEAI 244 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G-------~~V~~~d~~~~-----~-~~a~~~--------------g~~~-~~l~ell 244 (595)
++|+|||+|.||..+|..+...| .+|.+||++.. . +...+. ++.. .++++++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQAA 88 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHHH
Confidence 58999999999999999998878 89999998764 2 222221 1222 3678889
Q ss_pred cccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCch
Q 046427 245 STADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGV 286 (595)
Q Consensus 245 ~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~ 286 (595)
++||+|++|+|. ..+..++. +....+++++++|+++.|-.
T Consensus 89 ~~aD~Vilav~~-~~~~~v~~-~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 89 EDADILIFVVPH-QFIGKICD-QLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp TTCSEEEECCCG-GGHHHHHH-HHTTCSCTTCEEEECCCCBC
T ss_pred cCCCEEEEeCCH-HHHHHHHH-HHHhhCCCCCEEEEECCccC
Confidence 999999999994 44555552 33456788999999988643
No 136
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.11 E-value=4.7e-06 Score=91.08 Aligned_cols=102 Identities=18% Similarity=0.154 Sum_probs=72.7
Q ss_pred CEEEEEeCChHHHHHHHHHhcC-CC-EEEEECCCCc----HHHHHHc----------------------C-CcccCHHHh
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL-GM-NVIAHDPYAQ----ADRARAT----------------------G-VGLVSFEEA 243 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~-G~-~V~~~d~~~~----~~~a~~~----------------------g-~~~~~l~el 243 (595)
++|+|||+|.||..+|..+... |+ +|++||++.. .-..... | +...+-.+.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~ea 98 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFSR 98 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcHHH
Confidence 5899999999999999999999 99 9999998765 3211111 1 122222678
Q ss_pred ccccCEEEEeCCCCh--------hcccccc--HHHHhcCCCceEEEeccCCchhcHHHHHH
Q 046427 244 ISTADFISLHMPLTP--------ATSKMFN--DEAFFKMKKGVRIVNVARGGVVDEEALVR 294 (595)
Q Consensus 244 l~~aD~V~l~~Plt~--------~t~~li~--~~~l~~mk~gailiN~arg~~vd~~aL~~ 294 (595)
+++||+|++|+|... +...+.. +.....|++|.++|+++.-.+-..+.+.+
T Consensus 99 ~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~ 159 (478)
T 3g79_A 99 ISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAK 159 (478)
T ss_dssp GGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHH
T ss_pred HhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHH
Confidence 899999999999542 2222322 34556799999999999766655555554
No 137
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.11 E-value=2.2e-05 Score=81.39 Aligned_cols=175 Identities=14% Similarity=0.071 Sum_probs=109.9
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHH-----------HHcCC--------------c-ccCHHHhc
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRA-----------RATGV--------------G-LVSFEEAI 244 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a-----------~~~g~--------------~-~~~l~ell 244 (595)
-++|+|||.|.||+.+|..+...|++|+.||+.... +.+ .+.|. . ..++.+.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~ 85 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHh
Confidence 468999999999999999999999999999987521 110 11111 1 13688999
Q ss_pred cccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcC-CeeEEEEecCCCCCCCCCcccccC
Q 046427 245 STADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSG-IISQAALDVFTEEPPAKDSKLVLH 323 (595)
Q Consensus 245 ~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g-~i~ga~lDv~~~EP~~~~~~L~~~ 323 (595)
++||+|+=++|-.-+.+.-+-++.=+.++++++|-.-.++ +...++.+.+..- ++ .++.-|.+-|. -||.+
T Consensus 86 ~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~~p~r~--ig~HffNP~~~---m~LVE- 157 (319)
T 3ado_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAHVKQC--IVAHPVNPPYY---IPLVE- 157 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTTGGGE--EEEEECSSTTT---CCEEE-
T ss_pred ccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhccCCCcE--EEecCCCCccc---cchHH-
Confidence 9999999999988777766655555668999988654443 3455666665432 45 56666665433 36664
Q ss_pred CcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccccCCCCChhhhhccc-chhHHHHHH
Q 046427 324 ENVTVTPHLGASTTEAQEGVAIEIAEAVIGALKGELAATAVNAPMVPAEVISELA-PFVTLAEKL 387 (595)
Q Consensus 324 ~nvilTPHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn~~~~~~~~~~~~~-p~~~la~rl 387 (595)
+|-+|+.. .++.+.+.+|.+.-+-.+++..-..+....+.+. ||+.-|-+|
T Consensus 158 --iv~g~~Ts-----------~~~~~~~~~~~~~~gk~pv~v~kd~pGFi~NRl~~~~~~EA~~l 209 (319)
T 3ado_A 158 --LVPHPETS-----------PATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRL 209 (319)
T ss_dssp --EEECTTCC-----------HHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHH
T ss_pred --hcCCCCCc-----------HHHHHHHHHHHHHhCCccCCcCCCCCCEeHHHHHHHHHHHHHHH
Confidence 66666542 3334445555543333333232234445555554 666555554
No 138
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=98.04 E-value=4.7e-06 Score=86.67 Aligned_cols=86 Identities=22% Similarity=0.317 Sum_probs=65.4
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcC-----------Ccc-cCHHHhccccCEEEEeCCCCh
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATG-----------VGL-VSFEEAISTADFISLHMPLTP 258 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g-----------~~~-~~l~ell~~aD~V~l~~Plt~ 258 (595)
..+|+|||+|.||..+|.+|...|.+|.+||++.. .+...+.| +.. .++++ ++.+|+|++|+| +.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk-~~ 91 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIP-VQ 91 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSC-GG
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECC-HH
Confidence 35899999999999999999999999999998752 23333334 232 36778 899999999999 45
Q ss_pred hccccccHHHHhcCC-CceEEEeccCC
Q 046427 259 ATSKMFNDEAFFKMK-KGVRIVNVARG 284 (595)
Q Consensus 259 ~t~~li~~~~l~~mk-~gailiN~arg 284 (595)
.+..++. .++ ++.++|+++.|
T Consensus 92 ~~~~v~~-----~l~~~~~~vv~~~nG 113 (335)
T 1z82_A 92 YIREHLL-----RLPVKPSMVLNLSKG 113 (335)
T ss_dssp GHHHHHT-----TCSSCCSEEEECCCC
T ss_pred HHHHHHH-----HhCcCCCEEEEEeCC
Confidence 5555543 233 78899999876
No 139
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.04 E-value=5.6e-06 Score=75.43 Aligned_cols=101 Identities=17% Similarity=0.196 Sum_probs=75.7
Q ss_pred ecCCEEEEEeC----ChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccc
Q 046427 190 LVGKTLAVMGF----GKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMF 264 (595)
Q Consensus 190 l~gktvGIIGl----G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li 264 (595)
++-++|+|||+ |++|+.+++.++..|++|+.+||.... -.|.... +++|+.+..|++++++| .+....++
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~----i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~ 86 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE----IEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVA 86 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE----ETTEECBSSGGGSCTTCCEEEECSC-HHHHHHHH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCe----ECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHH
Confidence 45678999999 999999999999999999999886421 1466544 79999999999999999 56677776
Q ss_pred cHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 265 NDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 265 ~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
.+ ..+ +..++++++++. ..+++.++.++..+
T Consensus 87 ~~-~~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi 117 (138)
T 1y81_A 87 KE-AVE-AGFKKLWFQPGA----ESEEIRRFLEKAGV 117 (138)
T ss_dssp HH-HHH-TTCCEEEECTTS----CCHHHHHHHHHHTC
T ss_pred HH-HHH-cCCCEEEEcCcc----HHHHHHHHHHHCCC
Confidence 43 333 667788888754 24666666666555
No 140
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.03 E-value=8.9e-06 Score=86.70 Aligned_cols=93 Identities=23% Similarity=0.304 Sum_probs=76.3
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECC-------CCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhcc
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDP-------YAQADRARATGVGLVSFEEAISTADFISLHMPLTPATS 261 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~-------~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~ 261 (595)
-|+||+|+|||+|.-|.+-|..|+..|.+|++--+ ..+...+.+.|++..+..|+.++||+|.+.+|... ..
T Consensus 34 ~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~~~eA~~~ADvV~~L~PD~~-q~ 112 (491)
T 3ulk_A 34 YLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQ-HS 112 (491)
T ss_dssp GGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEEHHHHGGGCSEEEECSCGGG-HH
T ss_pred HHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecCHHHHHHhCCEEEEeCChhh-HH
Confidence 49999999999999999999999999999887432 12456788899998899999999999999999654 33
Q ss_pred ccccHHHHhcCCCceEEEeccCC
Q 046427 262 KMFNDEAFFKMKKGVRIVNVARG 284 (595)
Q Consensus 262 ~li~~~~l~~mk~gailiN~arg 284 (595)
.+.. +....||+|+.|. .|.|
T Consensus 113 ~vy~-~I~p~lk~G~~L~-faHG 133 (491)
T 3ulk_A 113 DVVR-TVQPLMKDGAALG-YSHG 133 (491)
T ss_dssp HHHH-HHGGGSCTTCEEE-ESSC
T ss_pred HHHH-HHHhhCCCCCEEE-ecCc
Confidence 4454 5778899999887 4444
No 141
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.03 E-value=3.3e-06 Score=89.29 Aligned_cols=90 Identities=11% Similarity=0.172 Sum_probs=66.9
Q ss_pred CEEEEEeCChHHHHHHHHHhcCC-------CEEEEECCCCc-----H-HHHHHc--------------CCcc-cCHHHhc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLG-------MNVIAHDPYAQ-----A-DRARAT--------------GVGL-VSFEEAI 244 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G-------~~V~~~d~~~~-----~-~~a~~~--------------g~~~-~~l~ell 244 (595)
++|+|||+|.||..+|..+...| .+|.+||++.. . +...+. ++.. .++++++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999998777 89999998764 2 222221 1222 2578889
Q ss_pred cccCEEEEeCCCChhccccccHHHHh----cCCCceEEEeccCC
Q 046427 245 STADFISLHMPLTPATSKMFNDEAFF----KMKKGVRIVNVARG 284 (595)
Q Consensus 245 ~~aD~V~l~~Plt~~t~~li~~~~l~----~mk~gailiN~arg 284 (595)
++||+|++|+| ......++. +... .+++++++|+++.|
T Consensus 102 ~~aDvVilav~-~~~~~~vl~-~i~~~~~~~l~~~~ivvs~~~G 143 (375)
T 1yj8_A 102 NDADLLIFIVP-CQYLESVLA-SIKESESIKIASHAKAISLTKG 143 (375)
T ss_dssp TTCSEEEECCC-HHHHHHHHH-HHTC---CCCCTTCEEEECCCS
T ss_pred cCCCEEEEcCC-HHHHHHHHH-HHhhhhhccCCCCCEEEEeCCc
Confidence 99999999999 455555553 2333 57889999999876
No 142
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=98.02 E-value=2.6e-06 Score=87.22 Aligned_cols=106 Identities=20% Similarity=0.201 Sum_probs=73.7
Q ss_pred CEEEEEeCChHHHHHHHHHhcC-----C-CEEEEECCCCcHHHHHH-cCCccc--------------CHHHhccccCEEE
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL-----G-MNVIAHDPYAQADRARA-TGVGLV--------------SFEEAISTADFIS 251 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~-----G-~~V~~~d~~~~~~~a~~-~g~~~~--------------~l~ell~~aD~V~ 251 (595)
++|+|||+|.||..+|..|... | .+|.+||+....+...+ .|+... +..+.++.+|+|+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi 88 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIARGAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYIL 88 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEcHHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEEE
Confidence 4799999999999999999987 8 99999998212333444 565322 2335678999999
Q ss_pred EeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 252 LHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 252 l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
+|+|... +..++ +.....++++.++|++.-| +-..+.+.+.+...++
T Consensus 89 l~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG-~~~~~~l~~~l~~~~v 135 (317)
T 2qyt_A 89 FCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG-ADIAERMRTYLPDTVV 135 (317)
T ss_dssp ECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS-SSHHHHHTTTSCTTTB
T ss_pred EecCccc-HHHHH-HHHHhhcCCCCEEEEccCC-CCcHHHHHHHCCCCcE
Confidence 9999544 55554 2333457788999998765 3234566666655443
No 143
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.01 E-value=4.6e-06 Score=78.76 Aligned_cols=94 Identities=16% Similarity=0.310 Sum_probs=66.7
Q ss_pred eeecCCEEEEEeCChHHHHHHHHHhcC-CCEEEEECCCCc-HHHHHHcCCccc-----C---HHHh--ccccCEEEEeCC
Q 046427 188 VSLVGKTLAVMGFGKVGTEVARRAKGL-GMNVIAHDPYAQ-ADRARATGVGLV-----S---FEEA--ISTADFISLHMP 255 (595)
Q Consensus 188 ~~l~gktvGIIGlG~IG~~vA~~l~~~-G~~V~~~d~~~~-~~~a~~~g~~~~-----~---l~el--l~~aD~V~l~~P 255 (595)
.++.+++++|+|+|.+|+.+|+.|+.. |++|+++|++.. .+.+.+.|+..+ + +.++ +.++|+|++++|
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 457788999999999999999999998 999999998763 334455666422 2 3444 678999999999
Q ss_pred CChhccccccHHHHhcCCCceEEEeccC
Q 046427 256 LTPATSKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 256 lt~~t~~li~~~~l~~mk~gailiN~ar 283 (595)
..+.+..++ ..+..+.+...++....
T Consensus 115 ~~~~~~~~~--~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 115 HHQGNQTAL--EQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp SHHHHHHHH--HHHHHTTCCSEEEEEES
T ss_pred ChHHHHHHH--HHHHHHCCCCEEEEEEC
Confidence 654444333 24455665656665433
No 144
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.00 E-value=1.1e-05 Score=79.80 Aligned_cols=95 Identities=15% Similarity=0.245 Sum_probs=70.3
Q ss_pred EEEEEeCChHHHHHHHHHhcCCCEE-EEECCCCcHHHHHHcCCcccCHHHhc-cccCEEEEeCCCChhccccccHHHHhc
Q 046427 194 TLAVMGFGKVGTEVARRAKGLGMNV-IAHDPYAQADRARATGVGLVSFEEAI-STADFISLHMPLTPATSKMFNDEAFFK 271 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~G~~V-~~~d~~~~~~~a~~~g~~~~~l~ell-~~aD~V~l~~Plt~~t~~li~~~~l~~ 271 (595)
+|||||+|.||+.+++.+...|+++ .+||+....+ . .+.++++++ .++|+|++|+|.. ..... ....
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~~~---~---~~~~~~~l~~~~~DvVv~~~~~~-~~~~~----~~~~ 70 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGEHE---K---MVRGIDEFLQREMDVAVEAASQQ-AVKDY----AEKI 70 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCCCT---T---EESSHHHHTTSCCSEEEECSCHH-HHHHH----HHHH
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcchh---h---hcCCHHHHhcCCCCEEEECCCHH-HHHHH----HHHH
Confidence 7999999999999999998889997 5889864211 1 345799999 7999999999943 22222 2345
Q ss_pred CCCceEEEeccCCchhcH---HHHHHHHhcC
Q 046427 272 MKKGVRIVNVARGGVVDE---EALVRALDSG 299 (595)
Q Consensus 272 mk~gailiN~arg~~vd~---~aL~~aL~~g 299 (595)
++.|..+++.+.+..-+. +.|.++.++.
T Consensus 71 l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~ 101 (236)
T 2dc1_A 71 LKAGIDLIVLSTGAFADRDFLSRVREVCRKT 101 (236)
T ss_dssp HHTTCEEEESCGGGGGSHHHHHHHHHHHHHH
T ss_pred HHCCCcEEEECcccCChHHHHHHHHHHHHhc
Confidence 788999999988776554 5666666543
No 145
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=97.99 E-value=4.6e-06 Score=84.07 Aligned_cols=102 Identities=15% Similarity=0.108 Sum_probs=69.5
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHHc---CC----c-ccCHHHhccccCEEEEeCCCChhcccc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARAT---GV----G-LVSFEEAISTADFISLHMPLTPATSKM 263 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~---g~----~-~~~l~ell~~aD~V~l~~Plt~~t~~l 263 (595)
++|+|||+|.||+.+|..+...|.+|.+||+.... +..... +. . ..+..+.++++|+|++|+|.. .+..+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~-~~~~v 79 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW-QVSDA 79 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG-GHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH-hHHHH
Confidence 37999999999999999999999999999987531 111111 11 0 123356778999999999954 45555
Q ss_pred ccHHHHhcCCCceEEEeccCCchhcHHHHHHHHh
Q 046427 264 FNDEAFFKMKKGVRIVNVARGGVVDEEALVRALD 297 (595)
Q Consensus 264 i~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~ 297 (595)
+ +.....++++.++|++..|- -..+.+.+.+.
T Consensus 80 ~-~~l~~~l~~~~~vv~~~~g~-~~~~~l~~~~~ 111 (291)
T 1ks9_A 80 V-KSLASTLPVTTPILLIHNGM-GTIEELQNIQQ 111 (291)
T ss_dssp H-HHHHTTSCTTSCEEEECSSS-CTTGGGTTCCS
T ss_pred H-HHHHhhCCCCCEEEEecCCC-CcHHHHHHhcC
Confidence 5 33455688899999986643 22334444443
No 146
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=97.97 E-value=1.3e-05 Score=81.56 Aligned_cols=81 Identities=14% Similarity=0.277 Sum_probs=68.7
Q ss_pred eeeecCCEEEEEeCCh-HHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhcccccc
Q 046427 187 GVSLVGKTLAVMGFGK-VGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFN 265 (595)
Q Consensus 187 g~~l~gktvGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~ 265 (595)
+.++.||++.|||.|. +|+.+|+.|...|.+|..++.+. .++.+.+++||+|+.+++. .+++.
T Consensus 154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~----p~lI~ 217 (288)
T 1b0a_A 154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT------------KNLRHHVENADLLIVAVGK----PGFIP 217 (288)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC------------SCHHHHHHHCSEEEECSCC----TTCBC
T ss_pred CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc------------hhHHHHhccCCEEEECCCC----cCcCC
Confidence 5679999999999997 59999999999999999997543 3688999999999999983 23676
Q ss_pred HHHHhcCCCceEEEeccCCch
Q 046427 266 DEAFFKMKKGVRIVNVARGGV 286 (595)
Q Consensus 266 ~~~l~~mk~gailiN~arg~~ 286 (595)
.+. +|+|+++||+|.-.+
T Consensus 218 ~~~---vk~GavVIDVgi~r~ 235 (288)
T 1b0a_A 218 GDW---IKEGAIVIDVGINRL 235 (288)
T ss_dssp TTT---SCTTCEEEECCCEEC
T ss_pred HHH---cCCCcEEEEccCCcc
Confidence 655 599999999997654
No 147
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.96 E-value=1.2e-05 Score=82.31 Aligned_cols=81 Identities=25% Similarity=0.319 Sum_probs=67.6
Q ss_pred eeeecCCEEEEEeCCh-HHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHH--HhccccCEEEEeCCCChhcccc
Q 046427 187 GVSLVGKTLAVMGFGK-VGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFE--EAISTADFISLHMPLTPATSKM 263 (595)
Q Consensus 187 g~~l~gktvGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~--ell~~aD~V~l~~Plt~~t~~l 263 (595)
+.++.||++.|||.|. +|+.+|..|...|++|..++++.. +++ +.+++||+|+.++|. .++
T Consensus 160 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~------------~l~l~~~~~~ADIVI~Avg~----p~~ 223 (300)
T 4a26_A 160 GIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS------------TEDMIDYLRTADIVIAAMGQ----PGY 223 (300)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC------------HHHHHHHHHTCSEEEECSCC----TTC
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC------------CchhhhhhccCCEEEECCCC----CCC
Confidence 4689999999999988 699999999999999999987432 345 899999999999994 345
Q ss_pred ccHHHHhcCCCceEEEeccCCch
Q 046427 264 FNDEAFFKMKKGVRIVNVARGGV 286 (595)
Q Consensus 264 i~~~~l~~mk~gailiN~arg~~ 286 (595)
+..+. +|+|+++||++.-.+
T Consensus 224 I~~~~---vk~GavVIDvgi~~~ 243 (300)
T 4a26_A 224 VKGEW---IKEGAAVVDVGTTPV 243 (300)
T ss_dssp BCGGG---SCTTCEEEECCCEEE
T ss_pred CcHHh---cCCCcEEEEEeccCC
Confidence 76654 599999999996544
No 148
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=97.95 E-value=1.9e-05 Score=80.01 Aligned_cols=81 Identities=14% Similarity=0.263 Sum_probs=68.3
Q ss_pred eeeecCCEEEEEeCChH-HHHHHHHHhcC--CCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhcccc
Q 046427 187 GVSLVGKTLAVMGFGKV-GTEVARRAKGL--GMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKM 263 (595)
Q Consensus 187 g~~l~gktvGIIGlG~I-G~~vA~~l~~~--G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~l 263 (595)
+.++.||++.|||.|.| |+.+|+.|... |.+|..++++. .++.+.+++||+|+.+++. .++
T Consensus 153 ~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t------------~~L~~~~~~ADIVI~Avg~----p~~ 216 (281)
T 2c2x_A 153 DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT------------RDLPALTRQADIVVAAVGV----AHL 216 (281)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC------------SCHHHHHTTCSEEEECSCC----TTC
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch------------hHHHHHHhhCCEEEECCCC----Ccc
Confidence 56799999999999985 99999999998 89999987543 3689999999999999983 235
Q ss_pred ccHHHHhcCCCceEEEeccCCch
Q 046427 264 FNDEAFFKMKKGVRIVNVARGGV 286 (595)
Q Consensus 264 i~~~~l~~mk~gailiN~arg~~ 286 (595)
|..+. +|+|+++||+|.-.+
T Consensus 217 I~~~~---vk~GavVIDVgi~r~ 236 (281)
T 2c2x_A 217 LTADM---VRPGAAVIDVGVSRT 236 (281)
T ss_dssp BCGGG---SCTTCEEEECCEEEE
T ss_pred cCHHH---cCCCcEEEEccCCCC
Confidence 77665 589999999997654
No 149
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=97.94 E-value=7.8e-06 Score=85.13 Aligned_cols=110 Identities=15% Similarity=0.167 Sum_probs=78.8
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcc--------------cCHHHhccccCEEEEeCCCC
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGL--------------VSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~--------------~~l~ell~~aD~V~l~~Plt 257 (595)
.++|+|||.|.||..+|..|...|.+|.+||+....+...+.|... .++++ ++.+|+|++|+|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~- 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA- 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc-
Confidence 3689999999999999999999999999999853333444455421 25666 5899999999995
Q ss_pred hhccccccHHHHhcCCCceEEEeccCCc------------------hhcHHHHHHHHhcCCeeEE
Q 046427 258 PATSKMFNDEAFFKMKKGVRIVNVARGG------------------VVDEEALVRALDSGIISQA 304 (595)
Q Consensus 258 ~~t~~li~~~~l~~mk~gailiN~arg~------------------~vd~~aL~~aL~~g~i~ga 304 (595)
..+..++. .....++++++||.+..|= +-.++.+.+.+...++.++
T Consensus 81 ~~~~~~~~-~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~~g 144 (335)
T 3ghy_A 81 PALESVAA-GIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVLGC 144 (335)
T ss_dssp HHHHHHHG-GGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEEEE
T ss_pred hhHHHHHH-HHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEEEE
Confidence 45555543 2334577899999998882 2235567777766665443
No 150
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=97.94 E-value=1.6e-05 Score=80.70 Aligned_cols=81 Identities=21% Similarity=0.312 Sum_probs=68.2
Q ss_pred eeeecCCEEEEEeCCh-HHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhcccccc
Q 046427 187 GVSLVGKTLAVMGFGK-VGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFN 265 (595)
Q Consensus 187 g~~l~gktvGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~ 265 (595)
+.++.||++.|||.|. +|+.+|..|...|++|...+++. .+|++.+++||+|+.++|. .+++.
T Consensus 156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T------------~~L~~~~~~ADIVI~Avg~----p~~I~ 219 (286)
T 4a5o_A 156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT------------RDLADHVSRADLVVVAAGK----PGLVK 219 (286)
T ss_dssp TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHHTCSEEEECCCC----TTCBC
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC------------cCHHHHhccCCEEEECCCC----CCCCC
Confidence 5689999999999987 79999999999999999987532 2688999999999999983 34676
Q ss_pred HHHHhcCCCceEEEeccCCch
Q 046427 266 DEAFFKMKKGVRIVNVARGGV 286 (595)
Q Consensus 266 ~~~l~~mk~gailiN~arg~~ 286 (595)
.+. +|+|+++||++.-.+
T Consensus 220 ~~~---vk~GavVIDvgi~~~ 237 (286)
T 4a5o_A 220 GEW---IKEGAIVIDVGINRQ 237 (286)
T ss_dssp GGG---SCTTCEEEECCSCSS
T ss_pred HHH---cCCCeEEEEeccccc
Confidence 654 599999999996553
No 151
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=97.94 E-value=1.8e-05 Score=80.33 Aligned_cols=81 Identities=17% Similarity=0.317 Sum_probs=68.0
Q ss_pred eeeecCCEEEEEeCCh-HHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhcccccc
Q 046427 187 GVSLVGKTLAVMGFGK-VGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFN 265 (595)
Q Consensus 187 g~~l~gktvGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~ 265 (595)
+.++.||++.|||.|. +|+.+|+.|...|++|...+++. .++++.+++||+|+.++|. .++|.
T Consensus 156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~----p~~I~ 219 (285)
T 3l07_A 156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT------------TDLKSHTTKADILIVAVGK----PNFIT 219 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHTTCSEEEECCCC----TTCBC
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------hhHHHhcccCCEEEECCCC----CCCCC
Confidence 4579999999999998 69999999999999999987542 2688999999999999983 34576
Q ss_pred HHHHhcCCCceEEEeccCCch
Q 046427 266 DEAFFKMKKGVRIVNVARGGV 286 (595)
Q Consensus 266 ~~~l~~mk~gailiN~arg~~ 286 (595)
.+. +|+|+++||++.-.+
T Consensus 220 ~~~---vk~GavVIDvgi~~~ 237 (285)
T 3l07_A 220 ADM---VKEGAVVIDVGINHV 237 (285)
T ss_dssp GGG---SCTTCEEEECCCEEE
T ss_pred HHH---cCCCcEEEEecccCc
Confidence 654 599999999996553
No 152
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.93 E-value=1.8e-05 Score=79.95 Aligned_cols=77 Identities=10% Similarity=0.139 Sum_probs=65.8
Q ss_pred ecCCEEEEEeCCh-HHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHH
Q 046427 190 LVGKTLAVMGFGK-VGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEA 268 (595)
Q Consensus 190 l~gktvGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~ 268 (595)
+.||++.|||.|. +|+.+|+.|.+.|++|+.++++. .++.+.+++||+|+.++|. .+++..+.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 211 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT------------KDIGSMTRSSKIVVVAVGR----PGFLNREM 211 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHHHSSEEEECSSC----TTCBCGGG
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc------------ccHHHhhccCCEEEECCCC----CccccHhh
Confidence 8999999999986 79999999999999999997632 3688999999999999984 33676654
Q ss_pred HhcCCCceEEEeccCCc
Q 046427 269 FFKMKKGVRIVNVARGG 285 (595)
Q Consensus 269 l~~mk~gailiN~arg~ 285 (595)
+|+|+++||++.-.
T Consensus 212 ---vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 212 ---VTPGSVVIDVGINY 225 (276)
T ss_dssp ---CCTTCEEEECCCEE
T ss_pred ---ccCCcEEEEeccCc
Confidence 59999999999654
No 153
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=97.93 E-value=2.4e-05 Score=79.99 Aligned_cols=82 Identities=20% Similarity=0.298 Sum_probs=68.8
Q ss_pred ceeeecCCEEEEEeCCh-HHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccc
Q 046427 186 VGVSLVGKTLAVMGFGK-VGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMF 264 (595)
Q Consensus 186 ~g~~l~gktvGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li 264 (595)
.+.++.||++.|||.|. +|+.+|+.|...|.+|..++.+. .+|.+.+++||+|+.+++. .++|
T Consensus 159 ~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~----p~~I 222 (301)
T 1a4i_A 159 TGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT------------AHLDEEVNKGDILVVATGQ----PEMV 222 (301)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHTTCSEEEECCCC----TTCB
T ss_pred cCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc------------ccHHHHhccCCEEEECCCC----cccC
Confidence 35689999999999996 69999999999999999997532 3689999999999999985 3357
Q ss_pred cHHHHhcCCCceEEEeccCCch
Q 046427 265 NDEAFFKMKKGVRIVNVARGGV 286 (595)
Q Consensus 265 ~~~~l~~mk~gailiN~arg~~ 286 (595)
..+. +|+|+++||+|.-.+
T Consensus 223 ~~~~---vk~GavVIDVgi~~~ 241 (301)
T 1a4i_A 223 KGEW---IKPGAIVIDCGINYV 241 (301)
T ss_dssp CGGG---SCTTCEEEECCCBC-
T ss_pred CHHH---cCCCcEEEEccCCCc
Confidence 7665 589999999998654
No 154
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=97.91 E-value=2.6e-06 Score=86.33 Aligned_cols=85 Identities=11% Similarity=0.038 Sum_probs=55.6
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEE-EEECCCCc-HHHH-HHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNV-IAHDPYAQ-ADRA-RATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAF 269 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V-~~~d~~~~-~~~a-~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l 269 (595)
.+|||||+|+||+.+|+.+... ++| .+||++.. .+.. ...|....++++++++||+|++|+|... ...+ +
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~DvVilav~~~~-~~~v-----~ 75 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRY-IKTV-----A 75 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTTT-HHHH-----H
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCCccCCHHHHHhcCCEEEEeCChHH-HHHH-----H
Confidence 3699999999999999999877 888 48998753 2222 3445522367888999999999999543 3333 3
Q ss_pred hcC-CCceEEEeccCC
Q 046427 270 FKM-KKGVRIVNVARG 284 (595)
Q Consensus 270 ~~m-k~gailiN~arg 284 (595)
..+ +++.+|||++-+
T Consensus 76 ~~l~~~~~ivi~~s~~ 91 (276)
T 2i76_A 76 NHLNLGDAVLVHCSGF 91 (276)
T ss_dssp TTTCCSSCCEEECCSS
T ss_pred HHhccCCCEEEECCCC
Confidence 333 688999999854
No 155
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.90 E-value=2.3e-05 Score=79.38 Aligned_cols=92 Identities=16% Similarity=0.104 Sum_probs=67.3
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH--HHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHH
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA--DRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAF 269 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l 269 (595)
||++.|+|.|.+|++++..|...|.+|.+++|.... +.+ +.++...+++++- ++|+|+.++|..-.....++.+.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~~~~~~~l~-~~DiVInaTp~Gm~~~~~l~~~~l 195 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCDCFMEPPKS-AFDLIINATSASLHNELPLNKEVL 195 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCEEESSCCSS-CCSEEEECCTTCCCCSCSSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEecHHHhc-cCCEEEEcccCCCCCCCCCChHHH
Confidence 899999999999999999999999999999998742 233 5666555665544 899999999975322223444422
Q ss_pred h-cCCCceEEEeccCCc
Q 046427 270 F-KMKKGVRIVNVARGG 285 (595)
Q Consensus 270 ~-~mk~gailiN~arg~ 285 (595)
. .++++.+++|+...+
T Consensus 196 ~~~l~~~~~v~D~vY~P 212 (269)
T 3phh_A 196 KGYFKEGKLAYDLAYGF 212 (269)
T ss_dssp HHHHHHCSEEEESCCSS
T ss_pred HhhCCCCCEEEEeCCCC
Confidence 2 456677777777665
No 156
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.89 E-value=3.3e-05 Score=63.77 Aligned_cols=69 Identities=10% Similarity=0.144 Sum_probs=54.3
Q ss_pred EEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEE--cCCC-CcHHHHHHHhcCCCcceEEEEe
Q 046427 524 ILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIG--VDEE-PSREVLKKIGETPAIEEFVFLK 594 (595)
Q Consensus 524 Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~--~d~~-~~~e~l~~L~~~~~v~~v~~i~ 594 (595)
|-+...|+||+++.|+++|+++|+||.++...+.. + .+.+.+. +.+. .-++++++|+++++|.+|..+.
T Consensus 8 l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~-~-~~~~~i~v~~~~~~~l~~l~~~L~~~~~V~~v~~~~ 79 (88)
T 2ko1_A 8 IRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKD-G-IFTCNLMIFVKNTDKLTTLMDKLRKVQGVFTVERLS 79 (88)
T ss_dssp EEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECS-S-EEEEEEEEEESSHHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred EEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcC-C-EEEEEEEEEECCHHHHHHHHHHHhcCCCceEEEEec
Confidence 45678999999999999999999999999997643 2 5555544 4332 2348999999999999987663
No 157
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.87 E-value=4e-05 Score=79.21 Aligned_cols=107 Identities=16% Similarity=0.145 Sum_probs=77.3
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCc---------------c-cCHHHhccccCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVG---------------L-VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~---------------~-~~l~ell~~aD~V~l~~Pl 256 (595)
++|+|||.|.||..+|..|...|.+|..|++.. .+...+.|+. . .+++++.+.+|+|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~-~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~ 81 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD-YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKV 81 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT-HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh-HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCC
Confidence 589999999999999999999999999999875 3333343321 1 2566776799999999995
Q ss_pred ChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeE
Q 046427 257 TPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQ 303 (595)
Q Consensus 257 t~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~g 303 (595)
.. +...+ +.....++++.++|.+.-| +-.++.+.+.+...++.+
T Consensus 82 ~~-~~~~l-~~l~~~l~~~t~Iv~~~nG-i~~~~~l~~~~~~~~vl~ 125 (320)
T 3i83_A 82 VE-GADRV-GLLRDAVAPDTGIVLISNG-IDIEPEVAAAFPDNEVIS 125 (320)
T ss_dssp CT-TCCHH-HHHTTSCCTTCEEEEECSS-SSCSHHHHHHSTTSCEEE
T ss_pred CC-hHHHH-HHHHhhcCCCCEEEEeCCC-CChHHHHHHHCCCCcEEE
Confidence 54 55554 2334457888999988765 333567777777666544
No 158
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.86 E-value=9.2e-06 Score=84.07 Aligned_cols=93 Identities=20% Similarity=0.228 Sum_probs=69.6
Q ss_pred ceeeecCCEEEEEeCChH-HHHHHHHHhcCCCEEEEECCCCc--HHHHHHcCC---cc--------cCHHHhccccCEEE
Q 046427 186 VGVSLVGKTLAVMGFGKV-GTEVARRAKGLGMNVIAHDPYAQ--ADRARATGV---GL--------VSFEEAISTADFIS 251 (595)
Q Consensus 186 ~g~~l~gktvGIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~--~~~a~~~g~---~~--------~~l~ell~~aD~V~ 251 (595)
.|.++.|+++.|||.|.| |+.+|+.|.+.|.+|..+|++.. .+.+...+. .. .++.+.+++||+|+
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVI 250 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVI 250 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEE
Confidence 466899999999999976 99999999999999999988621 111111111 11 35889999999999
Q ss_pred EeCCCChhccccccHHHHhcCCCceEEEeccCC
Q 046427 252 LHMPLTPATSKMFNDEAFFKMKKGVRIVNVARG 284 (595)
Q Consensus 252 l~~Plt~~t~~li~~~~l~~mk~gailiN~arg 284 (595)
.+++. + .-+|..+. +|+|+++||+|.-
T Consensus 251 sAtg~-p--~~vI~~e~---vk~GavVIDVgi~ 277 (320)
T 1edz_A 251 TGVPS-E--NYKFPTEY---IKEGAVCINFACT 277 (320)
T ss_dssp ECCCC-T--TCCBCTTT---SCTTEEEEECSSS
T ss_pred ECCCC-C--cceeCHHH---cCCCeEEEEcCCC
Confidence 99984 2 22366655 5899999999864
No 159
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.86 E-value=9.4e-06 Score=74.53 Aligned_cols=101 Identities=13% Similarity=0.159 Sum_probs=75.2
Q ss_pred CCEEEEEeC----ChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccH
Q 046427 192 GKTLAVMGF----GKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFND 266 (595)
Q Consensus 192 gktvGIIGl----G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~ 266 (595)
-++|+|||+ |++|..+++.++..|++|+.+||....+ .-.|+... +++++....|++++++| .+....++..
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~--~i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~~ 89 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGK--TLLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQE 89 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTS--EETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccc--ccCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHHH
Confidence 578999999 8999999999999999999999865101 11466544 78999999999999999 5667777643
Q ss_pred HHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 267 EAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 267 ~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
..+ ...+.++++.+. . ++++.+++++..+
T Consensus 90 -~~~-~g~~~i~i~~~~--~--~~~l~~~a~~~Gi 118 (145)
T 2duw_A 90 -AIA-IGAKTLWLQLGV--I--NEQAAVLAREAGL 118 (145)
T ss_dssp -HHH-HTCCEEECCTTC--C--CHHHHHHHHTTTC
T ss_pred -HHH-cCCCEEEEcCCh--H--HHHHHHHHHHcCC
Confidence 333 566778887642 2 6677777777655
No 160
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.85 E-value=4.6e-05 Score=78.19 Aligned_cols=105 Identities=11% Similarity=0.154 Sum_probs=73.6
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcH--HHHHHcCC---ccc---CHHHhccccCEEEEeCCCChh
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQA--DRARATGV---GLV---SFEEAISTADFISLHMPLTPA 259 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~--~~a~~~g~---~~~---~l~ell~~aD~V~l~~Plt~~ 259 (595)
++.|++++|+|.|.+|+.+|..|...|. +|.++|++... +.+.+.+. ... ++.+.++++|+|+.|+|....
T Consensus 138 ~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~ 217 (297)
T 2egg_A 138 TLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMH 217 (297)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCS
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCC
Confidence 5789999999999999999999999998 99999997532 23334343 222 456778999999999997542
Q ss_pred c--cc-cccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhc
Q 046427 260 T--SK-MFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDS 298 (595)
Q Consensus 260 t--~~-li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~ 298 (595)
. .. .+. ...++++.+++|+.-... ... |.++.++
T Consensus 218 ~~~~~~~i~---~~~l~~~~~v~D~~y~P~-~T~-ll~~A~~ 254 (297)
T 2egg_A 218 PRVEVQPLS---LERLRPGVIVSDIIYNPL-ETK-WLKEAKA 254 (297)
T ss_dssp SCCSCCSSC---CTTCCTTCEEEECCCSSS-SCH-HHHHHHH
T ss_pred CCCCCCCCC---HHHcCCCCEEEEcCCCCC-CCH-HHHHHHH
Confidence 1 11 133 234788999999987533 233 4444443
No 161
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.85 E-value=1.6e-05 Score=80.93 Aligned_cols=107 Identities=10% Similarity=0.134 Sum_probs=71.7
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcHHHHHHcCCcc---cCHHHhccccCEEEEeCCCC--hhccc
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQADRARATGVGL---VSFEEAISTADFISLHMPLT--PATSK 262 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a~~~g~~~---~~l~ell~~aD~V~l~~Plt--~~t~~ 262 (595)
++.||++.|+|.|.+|++++..|...|. +|.+++|+..........+.. .++.++++++|+|+.++|.. +....
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~ 193 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDS 193 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------CC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCcC
Confidence 5789999999999999999999999998 899999876332111112222 24667788999999999964 22222
Q ss_pred cccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcC
Q 046427 263 MFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSG 299 (595)
Q Consensus 263 li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g 299 (595)
.+. .+.++++.+++|+.-... .+.-+.+|-+.|
T Consensus 194 ~l~---~~~l~~~~~V~D~vY~P~-~T~ll~~A~~~G 226 (277)
T 3don_A 194 VIS---LNRLASHTLVSDIVYNPY-KTPILIEAEQRG 226 (277)
T ss_dssp SSC---CTTCCSSCEEEESCCSSS-SCHHHHHHHHTT
T ss_pred CCC---HHHcCCCCEEEEecCCCC-CCHHHHHHHHCc
Confidence 232 355789999999986643 333333343444
No 162
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.84 E-value=5e-05 Score=78.59 Aligned_cols=89 Identities=20% Similarity=0.353 Sum_probs=67.6
Q ss_pred cCCEEEEEeCChHHHHHHHHHhc-CC-CEEEEECCCCcHHHHHH----cCCc--ccCHHHhccccCEEEEeCCCChhccc
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKG-LG-MNVIAHDPYAQADRARA----TGVG--LVSFEEAISTADFISLHMPLTPATSK 262 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~-~G-~~V~~~d~~~~~~~a~~----~g~~--~~~l~ell~~aD~V~l~~Plt~~t~~ 262 (595)
..++++|||.|.+|+.+++.+.. ++ -+|.+||++.....+.+ .|+. ..++++++++||+|++|+|.. ..
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT~s~---~p 196 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPYASPEILERIGRRCGVPARMAAPADIAAQADIVVTATRST---TP 196 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTTCCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECCCCS---SC
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCcHHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEccCCC---Cc
Confidence 35799999999999999999875 44 58999999832233322 3553 348999999999999999963 35
Q ss_pred cccHHHHhcCCCceEEEeccCCc
Q 046427 263 MFNDEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 263 li~~~~l~~mk~gailiN~arg~ 285 (595)
++.. +.+|+|+.+++++...
T Consensus 197 vl~~---~~l~~G~~V~~vGs~~ 216 (313)
T 3hdj_A 197 LFAG---QALRAGAFVGAIGSSL 216 (313)
T ss_dssp SSCG---GGCCTTCEEEECCCSS
T ss_pred ccCH---HHcCCCcEEEECCCCC
Confidence 5553 3589999999998643
No 163
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.81 E-value=2.3e-05 Score=70.91 Aligned_cols=89 Identities=17% Similarity=0.327 Sum_probs=62.5
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCccc-----C---HHHh-ccccCEEEEeCCCChhccc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLV-----S---FEEA-ISTADFISLHMPLTPATSK 262 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-----~---l~el-l~~aD~V~l~~Plt~~t~~ 262 (595)
+++.|+|+|.+|+.+|+.|+..|++|+++|++.. .+.+.+.|+..+ + |.++ +.++|+|++++|...++..
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~~ 87 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGE 87 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHHH
Confidence 4689999999999999999999999999998763 344555676432 2 2222 5789999999996554443
Q ss_pred cccHHHHhcCCCceEEEeccC
Q 046427 263 MFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 263 li~~~~l~~mk~gailiN~ar 283 (595)
++ ..+..+.++..+|--.+
T Consensus 88 ~~--~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 88 IV--ASARAKNPDIEIIARAH 106 (140)
T ss_dssp HH--HHHHHHCSSSEEEEEES
T ss_pred HH--HHHHHHCCCCeEEEEEC
Confidence 33 23444556666664433
No 164
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.77 E-value=3.3e-05 Score=71.00 Aligned_cols=98 Identities=15% Similarity=0.140 Sum_probs=62.0
Q ss_pred ceeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHH-HcCCccc-----C---HHHh-ccccCEEEEeC
Q 046427 186 VGVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRAR-ATGVGLV-----S---FEEA-ISTADFISLHM 254 (595)
Q Consensus 186 ~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~-~~g~~~~-----~---l~el-l~~aD~V~l~~ 254 (595)
+.....++++.|+|+|.+|+.+|+.|+..|.+|+++|++.. .+.+. ..|+..+ + +.+. +.++|+|++++
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~ 92 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFT 92 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECS
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEe
Confidence 45567889999999999999999999999999999998763 22233 3454321 2 3333 67899999999
Q ss_pred CCChhccccccHHHHhcCCCceEEEeccCCc
Q 046427 255 PLTPATSKMFNDEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 255 Plt~~t~~li~~~~l~~mk~gailiN~arg~ 285 (595)
|....+. .+ ......+.+...++-..++.
T Consensus 93 ~~~~~~~-~~-~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 93 NDDSTNF-FI-SMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp SCHHHHH-HH-HHHHHHTSCCSEEEEECSSG
T ss_pred CCcHHHH-HH-HHHHHHHCCCCeEEEEECCH
Confidence 8533222 21 22333344445555555444
No 165
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=97.75 E-value=7.7e-05 Score=76.75 Aligned_cols=107 Identities=20% Similarity=0.215 Sum_probs=76.5
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcc---------------cCHHHhccccCEEEEeCCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGL---------------VSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~---------------~~l~ell~~aD~V~l~~Plt 257 (595)
++|+|||.|.||..+|..|...|.+|..|++.. .+...+.|+.. .+.++ ++.+|+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~-~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~~ 80 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD-YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKTF 80 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT-HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc-HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCCC
Confidence 579999999999999999999999999999875 34444445321 13444 67999999999944
Q ss_pred hhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEE
Q 046427 258 PATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQA 304 (595)
Q Consensus 258 ~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga 304 (595)
.+...+. ..-..++++.+||.+.-| +-.++.+.+.+...++.++
T Consensus 81 -~~~~~l~-~l~~~l~~~~~iv~l~nG-i~~~~~l~~~~~~~~v~~~ 124 (312)
T 3hn2_A 81 -ANSRYEE-LIRPLVEEGTQILTLQNG-LGNEEALATLFGAERIIGG 124 (312)
T ss_dssp -GGGGHHH-HHGGGCCTTCEEEECCSS-SSHHHHHHHHTCGGGEEEE
T ss_pred -CcHHHHH-HHHhhcCCCCEEEEecCC-CCcHHHHHHHCCCCcEEEE
Confidence 3555542 333457889999998876 3236677777776666443
No 166
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.73 E-value=4.8e-05 Score=76.32 Aligned_cols=100 Identities=18% Similarity=0.217 Sum_probs=72.9
Q ss_pred ecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcHHHHHHc----C-CcccCHHHhccccCEEEEeCCCC--hhcc
Q 046427 190 LVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQADRARAT----G-VGLVSFEEAISTADFISLHMPLT--PATS 261 (595)
Q Consensus 190 l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a~~~----g-~~~~~l~ell~~aD~V~l~~Plt--~~t~ 261 (595)
+.| +++|||.|.+|++++..|...|. +|.++||+.. .++++ + ....++.+.++++|+|+.++|.. ++ .
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~--ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~-~ 182 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIE--RAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGE-E 182 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHH--HHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSC-C
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHH--HHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCC-C
Confidence 578 99999999999999999999998 8999998653 23222 1 12336778899999999999963 22 2
Q ss_pred ccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcC
Q 046427 262 KMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSG 299 (595)
Q Consensus 262 ~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g 299 (595)
..+..+. ++++.+++|+.-+ .+.-+.++.+.|
T Consensus 183 ~~i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 183 LPVSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp CSCCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred CCCCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 2344333 5789999999988 455555555555
No 167
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.69 E-value=8.9e-05 Score=77.89 Aligned_cols=91 Identities=20% Similarity=0.209 Sum_probs=66.8
Q ss_pred cCCEEEEEeCChHHHHHHHHHh-cCC-CEEEEECCCCcH--HHHHHc----CC--c-ccCHHHhccccCEEEEeCCCChh
Q 046427 191 VGKTLAVMGFGKVGTEVARRAK-GLG-MNVIAHDPYAQA--DRARAT----GV--G-LVSFEEAISTADFISLHMPLTPA 259 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~-~~G-~~V~~~d~~~~~--~~a~~~----g~--~-~~~l~ell~~aD~V~l~~Plt~~ 259 (595)
..+++||||.|.+|+.+++.+. ..+ .+|.+||++... ..+... |+ . ..++++++++||+|++|+|.. .
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~-~ 206 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADK-A 206 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCS-S
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCC-C
Confidence 4579999999999999998875 344 589999997632 222222 53 2 237999999999999999965 2
Q ss_pred ccccccHHHHhcCCCceEEEeccCCc
Q 046427 260 TSKMFNDEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 260 t~~li~~~~l~~mk~gailiN~arg~ 285 (595)
...++.. +.+++|+.+++++...
T Consensus 207 ~~pvl~~---~~l~~G~~V~~vgs~~ 229 (350)
T 1x7d_A 207 YATIITP---DMLEPGMHLNAVGGDC 229 (350)
T ss_dssp EEEEECG---GGCCTTCEEEECSCCB
T ss_pred CCceecH---HHcCCCCEEEECCCCC
Confidence 3445543 4579999999998643
No 168
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=97.69 E-value=6.8e-05 Score=77.45 Aligned_cols=107 Identities=20% Similarity=0.229 Sum_probs=72.9
Q ss_pred ecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCc-------------c-cCHHHhccccCEEEEeC
Q 046427 190 LVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVG-------------L-VSFEEAISTADFISLHM 254 (595)
Q Consensus 190 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~-------------~-~~l~ell~~aD~V~l~~ 254 (595)
...++|+|||.|.||..+|..|...|.+|..| ++. ..+...+.|.. . .++++ ++.+|+|++++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilav 94 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCV 94 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEc
Confidence 44578999999999999999999999999999 654 23333344431 1 24444 58999999999
Q ss_pred CCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCee
Q 046427 255 PLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIIS 302 (595)
Q Consensus 255 Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ 302 (595)
|.. .+..++ +.....+++++++|.+.-|= -.++.+.+.+. .++.
T Consensus 95 k~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi-~~~~~l~~~~~-~~vl 138 (318)
T 3hwr_A 95 KST-DTQSAA-LAMKPALAKSALVLSLQNGV-ENADTLRSLLE-QEVA 138 (318)
T ss_dssp CGG-GHHHHH-HHHTTTSCTTCEEEEECSSS-SHHHHHHHHCC-SEEE
T ss_pred ccc-cHHHHH-HHHHHhcCCCCEEEEeCCCC-CcHHHHHHHcC-CcEE
Confidence 954 555554 22334578899999987763 23456666665 4443
No 169
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.65 E-value=0.00011 Score=65.14 Aligned_cols=88 Identities=16% Similarity=0.197 Sum_probs=57.2
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHH-HcCCccc-----CHHH---h-ccccCEEEEeCCCChhc
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRAR-ATGVGLV-----SFEE---A-ISTADFISLHMPLTPAT 260 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-~~g~~~~-----~l~e---l-l~~aD~V~l~~Plt~~t 260 (595)
+++++|+|+|.+|+.+|+.|...|.+|.++|++... +... ..++... +.+. . ++++|+|++++|.....
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 578999999999999999999999999999987532 2222 2354321 2222 2 67899999999854322
Q ss_pred cccccHHHHhcCCCceEEEec
Q 046427 261 SKMFNDEAFFKMKKGVRIVNV 281 (595)
Q Consensus 261 ~~li~~~~l~~mk~gailiN~ 281 (595)
. .-......++++.+++-+
T Consensus 84 ~--~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 84 L--MSSLLAKSYGINKTIARI 102 (140)
T ss_dssp H--HHHHHHHHTTCCCEEEEC
T ss_pred H--HHHHHHHHcCCCEEEEEe
Confidence 2 112234446666555533
No 170
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.61 E-value=0.00011 Score=65.96 Aligned_cols=66 Identities=15% Similarity=0.191 Sum_probs=49.2
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCccc-----C---HHHh-ccccCEEEEeCCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLV-----S---FEEA-ISTADFISLHMPL 256 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-----~---l~el-l~~aD~V~l~~Pl 256 (595)
.++++.|+|+|.+|+.+|+.|...|++|+++|++.. .+...+.++... + +.++ +.++|+|++++|.
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~ 80 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSD 80 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCC
Confidence 357899999999999999999999999999998763 334445565321 2 2222 4689999999983
No 171
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.56 E-value=8.4e-05 Score=63.95 Aligned_cols=87 Identities=20% Similarity=0.225 Sum_probs=61.0
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCC-CEEEEECCCCcH-HHHHHcCCcc--------cCHHHhccccCEEEEeCCCChhc
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLG-MNVIAHDPYAQA-DRARATGVGL--------VSFEEAISTADFISLHMPLTPAT 260 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G-~~V~~~d~~~~~-~~a~~~g~~~--------~~l~ell~~aD~V~l~~Plt~~t 260 (595)
.+++++|+|.|.||+.+++.+...| ++|+++|++... +.....++.. .++.++++++|+|+.++|... +
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~-~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL-T 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG-H
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh-h
Confidence 3578999999999999999999999 899999987632 3333344422 135677889999999998432 2
Q ss_pred cccccHHHHhcCCCceEEEecc
Q 046427 261 SKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 261 ~~li~~~~l~~mk~gailiN~a 282 (595)
..++. ...+.|...++.+
T Consensus 83 ~~~~~----~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 83 PIIAK----AAKAAGAHYFDLT 100 (118)
T ss_dssp HHHHH----HHHHTTCEEECCC
T ss_pred HHHHH----HHHHhCCCEEEec
Confidence 22221 1235677777765
No 172
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.53 E-value=0.0004 Score=75.06 Aligned_cols=105 Identities=12% Similarity=0.161 Sum_probs=63.8
Q ss_pred CEEEEEeCChHHHHHHHHHhc----------CCCEEEE-ECCCCcHHHHHHcCCc-ccCHHHhcc--ccCEEEEeCCCCh
Q 046427 193 KTLAVMGFGKVGTEVARRAKG----------LGMNVIA-HDPYAQADRARATGVG-LVSFEEAIS--TADFISLHMPLTP 258 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~----------~G~~V~~-~d~~~~~~~a~~~g~~-~~~l~ell~--~aD~V~l~~Plt~ 258 (595)
-+|||+|+|.||+.+++.+.. .+.+|.+ +|++.........+.. +.++++++. +.|+|+.|+|...
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~tp~~~ 90 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELIGGLE 90 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECCCSST
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcCCCch
Confidence 479999999999999887652 4667665 5765432221112333 347899987 5899999999533
Q ss_pred hccccccHHHHhcCCCceEEEeccCCchhc-HHHHHHHHhcCCe
Q 046427 259 ATSKMFNDEAFFKMKKGVRIVNVARGGVVD-EEALVRALDSGII 301 (595)
Q Consensus 259 ~t~~li~~~~l~~mk~gailiN~arg~~vd-~~aL~~aL~~g~i 301 (595)
....++ ...|+.|.-++-.-.+-... .++|.++.++...
T Consensus 91 ~h~~~~----~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv 130 (444)
T 3mtj_A 91 PARELV----MQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGV 130 (444)
T ss_dssp THHHHH----HHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHH----HHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCC
Confidence 222222 33456666666544432222 3567776655443
No 173
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.51 E-value=9.5e-05 Score=78.08 Aligned_cols=107 Identities=15% Similarity=0.139 Sum_probs=69.3
Q ss_pred eeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHH-HH-cC---Cc---ccCHHHhccccCEEEEeCCCChh
Q 046427 188 VSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRA-RA-TG---VG---LVSFEEAISTADFISLHMPLTPA 259 (595)
Q Consensus 188 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a-~~-~g---~~---~~~l~ell~~aD~V~l~~Plt~~ 259 (595)
.+=++++|+|+|+|.||+.+|+.|... .+|.++|++...... .+ .+ +. ..+++++++++|+|+.|+|..-
T Consensus 12 ~~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~- 89 (365)
T 2z2v_A 12 IEGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFL- 89 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHH-
T ss_pred ccCCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhh-
Confidence 356789999999999999999999877 899999987632211 11 11 11 1247889999999999998432
Q ss_pred ccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 260 TSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 260 t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
...+ ..+.++.|+.++|++-. .-+..+|.+..++..+
T Consensus 90 ~~~v----~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~ 126 (365)
T 2z2v_A 90 GFKS----IKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQV 126 (365)
T ss_dssp HHHH----HHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTC
T ss_pred hHHH----HHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCC
Confidence 1212 23346788889998742 2233455555444444
No 174
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.50 E-value=0.0001 Score=75.13 Aligned_cols=95 Identities=15% Similarity=0.125 Sum_probs=66.5
Q ss_pred eeecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcH--HHHHHcC----CcccCHHHhccccCEEEEeCCCChhc
Q 046427 188 VSLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQA--DRARATG----VGLVSFEEAISTADFISLHMPLTPAT 260 (595)
Q Consensus 188 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~--~~a~~~g----~~~~~l~ell~~aD~V~l~~Plt~~t 260 (595)
.++.||++.|+|.|.+|++++..|...|. +|.++++.... +.+.+.+ +...+++++.+++|+|+.++|..-..
T Consensus 122 ~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~~ 201 (281)
T 3o8q_A 122 VLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLDG 201 (281)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC--
T ss_pred CCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCCC
Confidence 45889999999999999999999999996 99999987532 2222222 33446777778999999999975321
Q ss_pred c-ccccHHHHhcCCCceEEEeccCCc
Q 046427 261 S-KMFNDEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 261 ~-~li~~~~l~~mk~gailiN~arg~ 285 (595)
. -.+.. +.++++.+++|+.-..
T Consensus 202 ~~~~l~~---~~l~~~~~V~DlvY~P 224 (281)
T 3o8q_A 202 ELPAIDP---VIFSSRSVCYDMMYGK 224 (281)
T ss_dssp --CSCCG---GGEEEEEEEEESCCCS
T ss_pred CCCCCCH---HHhCcCCEEEEecCCC
Confidence 1 12322 3356777777776543
No 175
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.50 E-value=0.00026 Score=76.46 Aligned_cols=133 Identities=20% Similarity=0.180 Sum_probs=79.9
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHH--------------------cC-Ccc-cCHHHhccccCEE
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARA--------------------TG-VGL-VSFEEAISTADFI 250 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~--------------------~g-~~~-~~l~ell~~aD~V 250 (595)
++|+|||+|-+|..+|..+...|++|++||.+...-.... .| ..+ .+.++.+++||++
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad~~ 101 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATDAT 101 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSSEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCCce
Confidence 5899999999999999999999999999997643211111 11 122 2577889999999
Q ss_pred EEeCCCChhccc-------ccc--HHHHhcCC---CceEEEeccCCchhcHHHHH-HHHhcCCeeEEEEe-cCCCCCCCC
Q 046427 251 SLHMPLTPATSK-------MFN--DEAFFKMK---KGVRIVNVARGGVVDEEALV-RALDSGIISQAALD-VFTEEPPAK 316 (595)
Q Consensus 251 ~l~~Plt~~t~~-------li~--~~~l~~mk---~gailiN~arg~~vd~~aL~-~aL~~g~i~ga~lD-v~~~EP~~~ 316 (595)
++|+| ||...+ +.. +..-..|+ +|.++|.-|+-.+=..+.+. ..+.+..- |.-.+ +|.+|-+.+
T Consensus 102 ~I~Vp-TP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~~-~~~f~v~~~PErl~e 179 (444)
T 3vtf_A 102 FIAVG-TPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEAG-GVKFSVASNPEFLRE 179 (444)
T ss_dssp EECCC-CCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTTT-TCCCEEEECCCCCCT
T ss_pred EEEec-CCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhCC-CCCceeecCcccccC
Confidence 99999 442221 111 11222343 67899998876554433333 33333211 11111 255665543
Q ss_pred Cc---ccccCCcEE
Q 046427 317 DS---KLVLHENVT 327 (595)
Q Consensus 317 ~~---~L~~~~nvi 327 (595)
.+ .++..++++
T Consensus 180 G~a~~d~~~~~riV 193 (444)
T 3vtf_A 180 GSALEDFFKPDRIV 193 (444)
T ss_dssp TSHHHHHHSCSCEE
T ss_pred CccccccccCCcEE
Confidence 33 345566765
No 176
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.47 E-value=0.00026 Score=73.41 Aligned_cols=87 Identities=15% Similarity=0.134 Sum_probs=63.3
Q ss_pred cCCEEEEEeCChHHHHHHHHHhc-CC-CEEEEECCCCcH--HHHHHc-----CCcccCHHHhccccCEEEEeCCCChhcc
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKG-LG-MNVIAHDPYAQA--DRARAT-----GVGLVSFEEAISTADFISLHMPLTPATS 261 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~-~G-~~V~~~d~~~~~--~~a~~~-----g~~~~~l~ell~~aD~V~l~~Plt~~t~ 261 (595)
..++++|||+|.+|+.+++.+.. ++ .+|.+||++... ..+.+. .+...++++++ ++|+|++|+|.. .
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~~~~~~e~v-~aDvVi~aTp~~---~ 199 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEAS-RCDVLVTTTPSR---K 199 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHT-SSSEEEECCCCS---S
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEEECCHHHHh-CCCEEEEeeCCC---C
Confidence 45799999999999999998875 43 589999997632 222221 12334789999 999999999953 3
Q ss_pred ccccHHHHhcCCCceEEEeccCC
Q 046427 262 KMFNDEAFFKMKKGVRIVNVARG 284 (595)
Q Consensus 262 ~li~~~~l~~mk~gailiN~arg 284 (595)
.++.. ..+++|+.+++++..
T Consensus 200 pv~~~---~~l~~G~~V~~ig~~ 219 (322)
T 1omo_A 200 PVVKA---EWVEEGTHINAIGAD 219 (322)
T ss_dssp CCBCG---GGCCTTCEEEECSCC
T ss_pred ceecH---HHcCCCeEEEECCCC
Confidence 45543 357899988888643
No 177
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.45 E-value=9.7e-05 Score=65.82 Aligned_cols=94 Identities=15% Similarity=0.226 Sum_probs=58.3
Q ss_pred ecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHHcCCcc-----cC---HHHh-ccccCEEEEeCCCChh
Q 046427 190 LVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARATGVGL-----VS---FEEA-ISTADFISLHMPLTPA 259 (595)
Q Consensus 190 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~-----~~---l~el-l~~aD~V~l~~Plt~~ 259 (595)
+.++++.|+|+|.+|+.+++.+...|++|+++|++... +...+.+... .+ +.++ +.++|+|+.++|...+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 56788999999999999999999999999999986422 2222234321 12 2333 6789999999986422
Q ss_pred ccccccHHHHhcCCCceEEEeccCCc
Q 046427 260 TSKMFNDEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 260 t~~li~~~~l~~mk~gailiN~arg~ 285 (595)
+. +.-......+.+. .++-...+.
T Consensus 84 ~~-~~~~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 84 AS-TLTTLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp HH-HHHHHHHHHTTCS-EEEEECCSH
T ss_pred HH-HHHHHHHHHcCCC-eEEEEeCCH
Confidence 21 1112233445565 444444443
No 178
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=97.42 E-value=0.00018 Score=73.93 Aligned_cols=105 Identities=18% Similarity=0.138 Sum_probs=70.5
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCcccC----------H-HHhccccCEEEEeCCCChhc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLVS----------F-EEAISTADFISLHMPLTPAT 260 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~~----------l-~ell~~aD~V~l~~Plt~~t 260 (595)
++|+|||.|.||..+|..|. .|.+|..+++.. ..+...+.|+...+ . .+....+|+|++++|.. ++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~-~~ 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQH-QL 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGG-GH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHH-HH
Confidence 58999999999999999999 899999999875 33444455653221 1 34577899999999943 35
Q ss_pred cccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeE
Q 046427 261 SKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQ 303 (595)
Q Consensus 261 ~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~g 303 (595)
...+ +.++.+.++. ||.+.-|= -.++.+.+.+...++.+
T Consensus 81 ~~~l--~~l~~~~~~~-ivs~~nGi-~~~e~l~~~~~~~~vl~ 119 (307)
T 3ego_A 81 QSVF--SSLERIGKTN-ILFLQNGM-GHIHDLKDWHVGHSIYV 119 (307)
T ss_dssp HHHH--HHTTSSCCCE-EEECCSSS-HHHHHHHTCCCSCEEEE
T ss_pred HHHH--HHhhcCCCCe-EEEecCCc-cHHHHHHHhCCCCcEEE
Confidence 4444 2334445666 78776653 23445555555555433
No 179
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.41 E-value=0.0011 Score=76.22 Aligned_cols=174 Identities=17% Similarity=0.149 Sum_probs=107.2
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHH---------------cCC-------cccCHHHhccccCE
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARA---------------TGV-------GLVSFEEAISTADF 249 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~---------------~g~-------~~~~l~ell~~aD~ 249 (595)
++|||||.|.||+.+|..+...|++|+.+|..... +.+.+ ... ...+-.+.+++||+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aDl 396 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELSTVDL 396 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGGGSCSE
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHHhhCCE
Confidence 68999999999999999999999999999987521 11100 000 11222345889999
Q ss_pred EEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccccCCcEEEc
Q 046427 250 ISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLVLHENVTVT 329 (595)
Q Consensus 250 V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilT 329 (595)
|+=++|..-+.+.-+-++.=+.++++++|-...++ +....|.++++.- =.-+++.-|.+-| .-||.+ ||-+
T Consensus 397 VIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~~p-~r~ig~HFfnP~~---~m~LVE---vi~g 467 (742)
T 3zwc_A 397 VVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTDRP-QLVIGTHFFSPAH---VMRLLE---VIPS 467 (742)
T ss_dssp EEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSSCG-GGEEEEECCSSTT---TCCEEE---EEEC
T ss_pred EEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcCCc-cccccccccCCCC---CCceEE---EecC
Confidence 99999988877766656555668999988765443 3555566665432 2237777776432 346764 7777
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccccCCCCChhhhhccc-chhHHHHHH
Q 046427 330 PHLGASTTEAQEGVAIEIAEAVIGALKGELAATAVNAPMVPAEVISELA-PFVTLAEKL 387 (595)
Q Consensus 330 PHi~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn~~~~~~~~~~~~~-p~~~la~rl 387 (595)
++.+ .| +.+.+.+|.+...-..++. -..+-...+.+. ||+.-|.++
T Consensus 468 ~~Ts---~e--------~~~~~~~~~~~lgK~pV~v-kd~pGFi~NRi~~~~~~ea~~l 514 (742)
T 3zwc_A 468 RYSS---PT--------TIATVMSLSKKIGKIGVVV-GNCYGFVGNRMLAPYYNQGFFL 514 (742)
T ss_dssp SSCC---HH--------HHHHHHHHHHHTTCEEEEC-CCSTTTTHHHHHHHHHHHHHHH
T ss_pred CCCC---HH--------HHHHHHHHHHHhCCCCccc-CCCCCccHHHHhhHHHHHHHHH
Confidence 7642 22 3333334433222222222 233345555554 777666655
No 180
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.41 E-value=0.00018 Score=76.58 Aligned_cols=87 Identities=23% Similarity=0.190 Sum_probs=61.0
Q ss_pred CEEEEEeCChHHHHHHHHHhc-CCCEEEEEC---CCCc-HHH-HHHcC------------C------c-c-cCHHHhccc
Q 046427 193 KTLAVMGFGKVGTEVARRAKG-LGMNVIAHD---PYAQ-ADR-ARATG------------V------G-L-VSFEEAIST 246 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~-~G~~V~~~d---~~~~-~~~-a~~~g------------~------~-~-~~l~ell~~ 246 (595)
++|+|||.|.||..+|..|.. .|.+|.+|| ++.. .+. ..+.| . . . .+++++++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 479999999999999999987 599999999 4321 122 12212 1 1 1 257888999
Q ss_pred cCEEEEeCCCChhccccccHHHHhcCCCceEEEec
Q 046427 247 ADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNV 281 (595)
Q Consensus 247 aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~ 281 (595)
||+|++++|.. ....++ ++....++++++|+..
T Consensus 83 aD~Vilav~~~-~~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAF-AHEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGG-GHHHHH-HHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchH-HHHHHH-HHHHhhCCCCcEEEEc
Confidence 99999999943 344444 2233457888999884
No 181
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.40 E-value=0.00036 Score=70.38 Aligned_cols=93 Identities=13% Similarity=0.101 Sum_probs=64.5
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH--HHHHHcC----CcccCHHHhc-cccCEEEEeCCCChhcc
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA--DRARATG----VGLVSFEEAI-STADFISLHMPLTPATS 261 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g----~~~~~l~ell-~~aD~V~l~~Plt~~t~ 261 (595)
.+.||++.|+|.|.+|+++|+.|...|.+|+++|++... +.+.+.+ +...+++++. .++|+|+.++|.... .
T Consensus 116 ~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~-~ 194 (271)
T 1nyt_A 116 IRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGIS-G 194 (271)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGG-T
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCC-C
Confidence 578999999999999999999999999999999987532 2222322 1223444544 589999999996442 1
Q ss_pred cc--ccHHHHhcCCCceEEEeccCCc
Q 046427 262 KM--FNDEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 262 ~l--i~~~~l~~mk~gailiN~arg~ 285 (595)
.+ +.. ..++++.+++|+.-..
T Consensus 195 ~~~~i~~---~~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 195 DIPAIPS---SLIHPGIYCYDMFYQK 217 (271)
T ss_dssp CCCCCCG---GGCCTTCEEEESCCCS
T ss_pred CCCCCCH---HHcCCCCEEEEeccCC
Confidence 11 222 2256778888877654
No 182
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.38 E-value=0.00043 Score=71.46 Aligned_cols=65 Identities=18% Similarity=0.350 Sum_probs=52.4
Q ss_pred CEEEEEeCChHHHHHHHHHhcC-CCEEE-EECCCCcH--HHHHHcCCcccCHHHhcc--ccCEEEEeCCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL-GMNVI-AHDPYAQA--DRARATGVGLVSFEEAIS--TADFISLHMPLT 257 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~~~~~l~ell~--~aD~V~l~~Plt 257 (595)
.+|||||+|.||+..++.++.. +++++ ++|++... ..+...|+.+.+++++++ ++|+|++|+|..
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~ 74 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCEVRTIDAIEAAADIDAVVICTPTD 74 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCEECCHHHHHHCTTCCEEEECSCGG
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCCcCCHHHHhcCCCCCEEEEeCCch
Confidence 4799999999999999999875 78877 58987632 334556777568999998 899999999943
No 183
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.37 E-value=0.00017 Score=72.83 Aligned_cols=70 Identities=13% Similarity=0.056 Sum_probs=51.4
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH--HHHHHcC----CcccCHHHhcc-ccCEEEEeCCCCh
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA--DRARATG----VGLVSFEEAIS-TADFISLHMPLTP 258 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g----~~~~~l~ell~-~aD~V~l~~Plt~ 258 (595)
.+.||+++|+|.|.+|+++|..|...|.+|.++|++... +.+.+.+ +...+++++.+ ++|+|+.++|...
T Consensus 116 ~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~ 192 (272)
T 1p77_A 116 LRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGL 192 (272)
T ss_dssp CCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCC
Confidence 578999999999999999999999999999999987532 2222221 22234555544 8999999999643
No 184
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.36 E-value=0.00035 Score=72.04 Aligned_cols=104 Identities=14% Similarity=0.195 Sum_probs=66.2
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcHHHHH------H---c--C--Ccc-cCHHHhccccCEEEEeCCC
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQADRAR------A---T--G--VGL-VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a~------~---~--g--~~~-~~l~ell~~aD~V~l~~Pl 256 (595)
.++|+|||.|.||..+|..+...|+ +|..||+........ . . . +.. .++ +.+++||+|+++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 3689999999999999999998887 999999876321110 0 0 1 222 356 788999999999942
Q ss_pred Ch-----------hcccccc--HHHHhcCCCceEEEeccCCchhcHHHHHHHH
Q 046427 257 TP-----------ATSKMFN--DEAFFKMKKGVRIVNVARGGVVDEEALVRAL 296 (595)
Q Consensus 257 t~-----------~t~~li~--~~~l~~mk~gailiN~arg~~vd~~aL~~aL 296 (595)
.. ++..++. .+.+....+++++++++-..-+....+.+..
T Consensus 83 p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~~~~~ 135 (317)
T 2ewd_A 83 PGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHFQKVS 135 (317)
T ss_dssp SSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHhh
Confidence 11 1111110 0122334578999998865444445555543
No 185
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.30 E-value=0.0013 Score=69.42 Aligned_cols=111 Identities=25% Similarity=0.261 Sum_probs=81.9
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCC----Cc----------HHHHHHcCC--cccCHHHhccccCE
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPY----AQ----------ADRARATGV--GLVSFEEAISTADF 249 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~----~~----------~~~a~~~g~--~~~~l~ell~~aD~ 249 (595)
|..+.+.+|.|+|.|..|..+|+.+.+.|. +|+.+|+. .. ...+.+.+. ...+|.|.++++|+
T Consensus 187 g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADV 266 (388)
T 1vl6_A 187 EKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADF 266 (388)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSE
T ss_pred CCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCE
Confidence 446889999999999999999999999998 89999987 21 112222221 13479999999999
Q ss_pred EEEeCCCChhccccccHHHHhcCCCceEEEeccCCch-hcHHHHHHHHhcC-CeeEEE
Q 046427 250 ISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGV-VDEEALVRALDSG-IISQAA 305 (595)
Q Consensus 250 V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~-vd~~aL~~aL~~g-~i~ga~ 305 (595)
++-+.- -+++.++.++.|+++++|+.+|+-.. +..++.+++ | .|.+.|
T Consensus 267 lIG~Sa-----p~l~t~emVk~Ma~~pIIfalSNPt~E~~p~~a~~~---g~~i~atG 316 (388)
T 1vl6_A 267 FIGVSR-----GNILKPEWIKKMSRKPVIFALANPVPEIDPELAREA---GAFIVATG 316 (388)
T ss_dssp EEECSC-----SSCSCHHHHTTSCSSCEEEECCSSSCSSCHHHHHHT---TCSEEEES
T ss_pred EEEeCC-----CCccCHHHHHhcCCCCEEEEcCCCCCCCCHHHHHHh---cCeEEEeC
Confidence 987741 38999999999999999999996432 133333444 5 454444
No 186
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.29 E-value=0.00043 Score=64.78 Aligned_cols=72 Identities=15% Similarity=0.188 Sum_probs=59.7
Q ss_pred cEEEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEEcCCC--CcHHHHHHHhcCCCcceEEEE
Q 046427 522 SIILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIGVDEE--PSREVLKKIGETPAIEEFVFL 593 (595)
Q Consensus 522 ~~Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~~d~~--~~~e~l~~L~~~~~v~~v~~i 593 (595)
|.|-+...|+||++++|+.+|+++|+||.++.+...+..+.+.+.+.++.. .-+.+.++|.++++|.+|.-+
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~d~~~leqI~kqL~Kl~dV~~V~r~ 77 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHKLVDVLRVSEL 77 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEG
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEeccHHHHHHHHHHHcCCCCEEEEEEc
Confidence 677788899999999999999999999999999876655678887777644 334888889999999888643
No 187
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.28 E-value=0.00063 Score=70.65 Aligned_cols=65 Identities=23% Similarity=0.397 Sum_probs=51.1
Q ss_pred CEEEEEeCChHHHHHHHHHhcC-CCEEE-EECCCCcH--HHHHHcCCc-ccCHHHhcc--ccCEEEEeCCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL-GMNVI-AHDPYAQA--DRARATGVG-LVSFEEAIS--TADFISLHMPLT 257 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~~-~~~l~ell~--~aD~V~l~~Plt 257 (595)
.+|||||+|.||+.+++.++.. +++++ ++|++... ..+.+.|+. +.+++++++ ++|+|++|+|..
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~ 76 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTS 76 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGG
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCch
Confidence 3799999999999999999875 78877 58887632 234455654 348999998 899999999943
No 188
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.26 E-value=0.00067 Score=70.75 Aligned_cols=66 Identities=9% Similarity=0.177 Sum_probs=51.9
Q ss_pred CEEEEEeCChHHHHHHHHHhcC-CCEEE-EECCCCcH--HHHHHcCCcc-cCHHHhc--cccCEEEEeCCCCh
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL-GMNVI-AHDPYAQA--DRARATGVGL-VSFEEAI--STADFISLHMPLTP 258 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~~~-~~l~ell--~~aD~V~l~~Plt~ 258 (595)
.+|||||+|.||+..++.++.. +++++ ++|++... ..+.+.|+.. .++++++ .+.|+|++|+|...
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~ 78 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDK 78 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTS
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHH
Confidence 4799999999999999999977 78866 67887632 2345567654 4899999 66999999999543
No 189
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.25 E-value=0.00035 Score=71.74 Aligned_cols=64 Identities=17% Similarity=0.268 Sum_probs=47.8
Q ss_pred CEEEEEeCChHHHHHHHHHhcCC--CEEEEECCCCcH-H-HHHHc---------CCcc--cCHHHhccccCEEEEeCCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLG--MNVIAHDPYAQA-D-RARAT---------GVGL--VSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~-~-~a~~~---------g~~~--~~l~ell~~aD~V~l~~Plt 257 (595)
++|+|||.|.||..+|..+...| .+|..||++... + .+... .+.. .++ +.+++||+|++++|..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 47999999999999999998777 699999987521 1 11111 1222 356 7789999999999953
No 190
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.24 E-value=0.00079 Score=69.58 Aligned_cols=65 Identities=14% Similarity=0.198 Sum_probs=47.2
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCC--EEEEECCCCcH-HH-HH--Hc------C--CcccCHHHhccccCEEEEeCCCCh
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGM--NVIAHDPYAQA-DR-AR--AT------G--VGLVSFEEAISTADFISLHMPLTP 258 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~-~~-a~--~~------g--~~~~~l~ell~~aD~V~l~~Plt~ 258 (595)
++|+|||.|.||..+|..+...|+ +|..||+.... +. .. .. . +...+ .+.+++||+|++++|...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 479999999999999999988888 99999987521 11 11 11 1 11124 356799999999999533
No 191
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=97.23 E-value=0.00023 Score=75.51 Aligned_cols=82 Identities=21% Similarity=0.324 Sum_probs=68.5
Q ss_pred CCEEEEEeC-ChHHHHHHHHHhcCCC---EEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHH
Q 046427 192 GKTLAVMGF-GKVGTEVARRAKGLGM---NVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDE 267 (595)
Q Consensus 192 gktvGIIGl-G~IG~~vA~~l~~~G~---~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~ 267 (595)
.-+|.|||. |+.|..-++.++++|. .|..+|.+.. ..|-. + +.+.++|+|+.|+......-.++.++
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~-----~~g~~---~-~~i~~aDivIn~vlig~~aP~Lvt~e 284 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKET-----SRGGP---F-DEIPQADIFINCIYLSKPIAPFTNME 284 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHH-----TTCSC---C-THHHHSSEEEECCCCCSSCCCSCCHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccc-----ccCCc---h-hhHhhCCEEEECcCcCCCCCcccCHH
Confidence 557899999 9999999999999998 8999997531 11332 2 34669999999999866677899999
Q ss_pred HHhcC-CCceEEEecc
Q 046427 268 AFFKM-KKGVRIVNVA 282 (595)
Q Consensus 268 ~l~~m-k~gailiN~a 282 (595)
.++.| |||++|||++
T Consensus 285 ~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 285 KLNNPNRRLRTVVDVS 300 (394)
T ss_dssp HHCCTTCCCCEEEETT
T ss_pred HHhcCcCCCeEEEEEe
Confidence 99999 9999999997
No 192
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.22 E-value=0.00072 Score=68.46 Aligned_cols=95 Identities=9% Similarity=0.082 Sum_probs=64.0
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcH--HHHHHcC---CcccCHHHhc-cccCEEEEeCCCChh
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQA--DRARATG---VGLVSFEEAI-STADFISLHMPLTPA 259 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~--~~a~~~g---~~~~~l~ell-~~aD~V~l~~Plt~~ 259 (595)
+.++.||++.|+|.|.+|++++..|...|. +|.+++++... +.+.+.+ +...+++++- .++|+|+.++|..-.
T Consensus 115 ~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~ 194 (272)
T 3pwz_A 115 GEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLT 194 (272)
T ss_dssp CCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGG
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCC
Confidence 346889999999999999999999999996 99999997632 2233333 2334555554 789999999986421
Q ss_pred cc-ccccHHHHhcCCCceEEEeccCC
Q 046427 260 TS-KMFNDEAFFKMKKGVRIVNVARG 284 (595)
Q Consensus 260 t~-~li~~~~l~~mk~gailiN~arg 284 (595)
.. -.+.. +.++++.+++|+.-.
T Consensus 195 ~~~~~i~~---~~l~~~~~V~DlvY~ 217 (272)
T 3pwz_A 195 ADLPPLPA---DVLGEAALAYELAYG 217 (272)
T ss_dssp TCCCCCCG---GGGTTCSEEEESSCS
T ss_pred CCCCCCCH---HHhCcCCEEEEeecC
Confidence 11 11222 234566666666543
No 193
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.21 E-value=0.00087 Score=68.98 Aligned_cols=63 Identities=19% Similarity=0.299 Sum_probs=46.9
Q ss_pred CEEEEEeCChHHHHHHHHHhc--CCCEEEEECCCCcHHHHH----Hc-------C--Ccc-cCHHHhccccCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKG--LGMNVIAHDPYAQADRAR----AT-------G--VGL-VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~--~G~~V~~~d~~~~~~~a~----~~-------g--~~~-~~l~ell~~aD~V~l~~Pl 256 (595)
++|+|||.|.+|..+|..+.. +|.+|..||++....... .. . +.. .++++ +++||+|++++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 379999999999999999885 589999999876321111 11 1 112 35666 8999999999984
No 194
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.17 E-value=0.0011 Score=68.32 Aligned_cols=102 Identities=13% Similarity=0.208 Sum_probs=64.1
Q ss_pred EEEEEeCChHHH-HHHHHHhcC-CCEEEEECCCCcH--HHHHHcCCc--ccCHHHhc-cccCEEEEeCCCChhccccccH
Q 046427 194 TLAVMGFGKVGT-EVARRAKGL-GMNVIAHDPYAQA--DRARATGVG--LVSFEEAI-STADFISLHMPLTPATSKMFND 266 (595)
Q Consensus 194 tvGIIGlG~IG~-~vA~~l~~~-G~~V~~~d~~~~~--~~a~~~g~~--~~~l~ell-~~aD~V~l~~Plt~~t~~li~~ 266 (595)
+|||||+|.||+ .+++.++.. +.+++++|++... ..+.+.|+. +.+..+++ .++|+|++|+|... ...++
T Consensus 4 ~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~-h~~~~-- 80 (323)
T 1xea_A 4 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDV-HSTLA-- 80 (323)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGG-HHHHH--
T ss_pred EEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchh-HHHHH--
Confidence 799999999998 489988765 7888899987632 234556765 34555666 78999999999322 22222
Q ss_pred HHHhcCCCce-EEEec-cCCchhcHHHHHHHHhcCC
Q 046427 267 EAFFKMKKGV-RIVNV-ARGGVVDEEALVRALDSGI 300 (595)
Q Consensus 267 ~~l~~mk~ga-iliN~-arg~~vd~~aL~~aL~~g~ 300 (595)
...++.|. +++.- .--.+-+.+.|.++.++..
T Consensus 81 --~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g 114 (323)
T 1xea_A 81 --AFFLHLGIPTFVDKPLAASAQECENLYELAEKHH 114 (323)
T ss_dssp --HHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTT
T ss_pred --HHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcC
Confidence 22344554 55542 1122334556777666544
No 195
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.16 E-value=0.00085 Score=68.45 Aligned_cols=79 Identities=18% Similarity=0.253 Sum_probs=65.7
Q ss_pred ceeeecCCEEEEEeCCh-HHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccc
Q 046427 186 VGVSLVGKTLAVMGFGK-VGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMF 264 (595)
Q Consensus 186 ~g~~l~gktvGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li 264 (595)
.+.++.||++.|||-+. +|+.+|..|...++.|..+.... .+|.+.+++||+|+.++.. .+++
T Consensus 173 ~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T------------~dl~~~~~~ADIvV~A~G~----p~~i 236 (303)
T 4b4u_A 173 NNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT------------QNLPELVKQADIIVGAVGK----AELI 236 (303)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHHTCSEEEECSCS----TTCB
T ss_pred HCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCC------------CCHHHHhhcCCeEEeccCC----CCcc
Confidence 35689999999999865 69999999999999999886532 2688999999999999863 4577
Q ss_pred cHHHHhcCCCceEEEeccC
Q 046427 265 NDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 265 ~~~~l~~mk~gailiN~ar 283 (595)
..+. .|+|+++||++-
T Consensus 237 ~~d~---vk~GavVIDVGi 252 (303)
T 4b4u_A 237 QKDW---IKQGAVVVDAGF 252 (303)
T ss_dssp CGGG---SCTTCEEEECCC
T ss_pred cccc---ccCCCEEEEece
Confidence 7654 699999999984
No 196
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.16 E-value=0.00097 Score=68.09 Aligned_cols=102 Identities=16% Similarity=0.184 Sum_probs=66.0
Q ss_pred CEEEEEeCChHHHH-HHHHHhc-CCCEEE-EECCCCcH--HHHHHcCCc-ccCHHHhccccCEEEEeCCCChhccccccH
Q 046427 193 KTLAVMGFGKVGTE-VARRAKG-LGMNVI-AHDPYAQA--DRARATGVG-LVSFEEAISTADFISLHMPLTPATSKMFND 266 (595)
Q Consensus 193 ktvGIIGlG~IG~~-vA~~l~~-~G~~V~-~~d~~~~~--~~a~~~g~~-~~~l~ell~~aD~V~l~~Plt~~t~~li~~ 266 (595)
.++||||+|.||+. +++.++. -++++. ++|++... ..+.+.|+. +.+++++++++|+|++|+|... ...++
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~-h~~~~-- 83 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTET-HYEII-- 83 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGG-HHHHH--
T ss_pred CcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHh-HHHHH--
Confidence 58999999999996 8888876 478887 58987632 334556765 4589999999999999999432 22222
Q ss_pred HHHhcCCCce-EEEe-ccCCchhcHHHHHHHHhcC
Q 046427 267 EAFFKMKKGV-RIVN-VARGGVVDEEALVRALDSG 299 (595)
Q Consensus 267 ~~l~~mk~ga-iliN-~arg~~vd~~aL~~aL~~g 299 (595)
...++.|. +++. ..--.+-+.++|.++.++.
T Consensus 84 --~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~ 116 (308)
T 3uuw_A 84 --KILLNLGVHVYVDKPLASTVSQGEELIELSTKK 116 (308)
T ss_dssp --HHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHH
T ss_pred --HHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHc
Confidence 12233443 4433 2222333455666665553
No 197
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.15 E-value=0.00094 Score=69.06 Aligned_cols=65 Identities=14% Similarity=0.095 Sum_probs=51.3
Q ss_pred CEEEEEeCChHHHHHHHHHhcC-CCEEE-EECCCCcH--HHHHHcCCc--ccCHHHhcc--ccCEEEEeCCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL-GMNVI-AHDPYAQA--DRARATGVG--LVSFEEAIS--TADFISLHMPLT 257 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~~--~~~l~ell~--~aD~V~l~~Plt 257 (595)
.+|||||+|.||+.+++.++.. ++++. ++|++... ..+.+.|+. +.++++++. ++|+|++|+|..
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 78 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQ 78 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGG
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCH
Confidence 4899999999999999999874 67877 57887632 334556763 458999998 899999999943
No 198
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.14 E-value=0.0013 Score=67.38 Aligned_cols=104 Identities=14% Similarity=0.146 Sum_probs=66.8
Q ss_pred CEEEEEeCChHHHH-HHHHHhc-CCCEEE-EECCCCcH--HHHHHcCCcc-cCHHHhccccCEEEEeCCCChhccccccH
Q 046427 193 KTLAVMGFGKVGTE-VARRAKG-LGMNVI-AHDPYAQA--DRARATGVGL-VSFEEAISTADFISLHMPLTPATSKMFND 266 (595)
Q Consensus 193 ktvGIIGlG~IG~~-vA~~l~~-~G~~V~-~~d~~~~~--~~a~~~g~~~-~~l~ell~~aD~V~l~~Plt~~t~~li~~ 266 (595)
.+|||||+|.||+. +++.++. -++++. ++|++... ..+...|+.. .+++++..++|+|++|+|... ...++
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~-h~~~~-- 82 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTAS-HFDVV-- 82 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTH-HHHHH--
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchh-HHHHH--
Confidence 47999999999997 8888875 478876 78887632 3344557653 367777678999999999533 22222
Q ss_pred HHHhcCCCce-EEEec-cCCchhcHHHHHHHHhcCCe
Q 046427 267 EAFFKMKKGV-RIVNV-ARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 267 ~~l~~mk~ga-iliN~-arg~~vd~~aL~~aL~~g~i 301 (595)
...++.|. +++.- .-..+-+.+.|.++.++..+
T Consensus 83 --~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~ 117 (319)
T 1tlt_A 83 --STLLNAGVHVCVDKPLAENLRDAERLVELAARKKL 117 (319)
T ss_dssp --HHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred --HHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 22345564 55542 22234455667777665543
No 199
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.12 E-value=0.0012 Score=68.58 Aligned_cols=64 Identities=20% Similarity=0.249 Sum_probs=50.8
Q ss_pred CEEEEEeCChHHHHHHHHHhcC-CCEEE-EECCCCcH--HHHHHcCCc--ccCHHHhcc--ccCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL-GMNVI-AHDPYAQA--DRARATGVG--LVSFEEAIS--TADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~~--~~~l~ell~--~aD~V~l~~Pl 256 (595)
.+|||||+|.||+..++.++.. +++++ ++|++... ..+...|+. +.+++++++ ++|+|++|+|.
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 74 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSST 74 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCC
Confidence 3799999999999999999865 67877 57887632 334556763 458999998 89999999994
No 200
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.12 E-value=0.0011 Score=68.37 Aligned_cols=101 Identities=16% Similarity=0.220 Sum_probs=64.1
Q ss_pred EEEEEeCChHHHHH-HHHHhcCCCEEE-EECCCCcH--HHHHHcCCc--ccCHHHhcc--ccCEEEEeCCCChhcccccc
Q 046427 194 TLAVMGFGKVGTEV-ARRAKGLGMNVI-AHDPYAQA--DRARATGVG--LVSFEEAIS--TADFISLHMPLTPATSKMFN 265 (595)
Q Consensus 194 tvGIIGlG~IG~~v-A~~l~~~G~~V~-~~d~~~~~--~~a~~~g~~--~~~l~ell~--~aD~V~l~~Plt~~t~~li~ 265 (595)
+|||||+|.||+.+ ++.++..+++++ ++|++... ..+.+.|+. +.+++++++ ++|+|++++|... ...+
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~-h~~~-- 78 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNEL-HREQ-- 78 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGG-HHHH--
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhH-hHHH--
Confidence 79999999999998 777766778876 57887632 234555663 348999987 5999999999422 1111
Q ss_pred HHHHhcCCCce-EEEec-cCCchhcHHHHHHHHhcC
Q 046427 266 DEAFFKMKKGV-RIVNV-ARGGVVDEEALVRALDSG 299 (595)
Q Consensus 266 ~~~l~~mk~ga-iliN~-arg~~vd~~aL~~aL~~g 299 (595)
....++.|. +++.- .....-+.++|.++.++.
T Consensus 79 --~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~ 112 (332)
T 2glx_A 79 --TLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREA 112 (332)
T ss_dssp --HHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred --HHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHc
Confidence 222345564 44432 122333445666665543
No 201
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.11 E-value=0.00057 Score=62.35 Aligned_cols=90 Identities=13% Similarity=0.099 Sum_probs=57.7
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH---HHH--HHcCCccc--------CHHHh-ccccCEEEEeCCCC
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA---DRA--RATGVGLV--------SFEEA-ISTADFISLHMPLT 257 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---~~a--~~~g~~~~--------~l~el-l~~aD~V~l~~Plt 257 (595)
.+++.|+|+|.+|+.+++.|...|.+|+++|++... ... ...|+... .+.++ +.++|+|+++++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 467999999999999999999999999999986421 111 12244321 24454 78999999999854
Q ss_pred hhccccccHHHHhcCCCceEEEeccC
Q 046427 258 PATSKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 258 ~~t~~li~~~~l~~mk~gailiN~ar 283 (595)
+.+ +.-......+.+...++...+
T Consensus 83 ~~n--~~~~~~a~~~~~~~~ii~~~~ 106 (153)
T 1id1_A 83 ADN--AFVVLSAKDMSSDVKTVLAVS 106 (153)
T ss_dssp HHH--HHHHHHHHHHTSSSCEEEECS
T ss_pred HHH--HHHHHHHHHHCCCCEEEEEEC
Confidence 322 222333444544444444333
No 202
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.11 E-value=0.0011 Score=68.17 Aligned_cols=101 Identities=14% Similarity=0.104 Sum_probs=64.0
Q ss_pred EEEEEeCChHHHHHHHHHhcC-CCEEE-EECCCCcH--HHHHHcCC-c-ccCHHHhc-cccCEEEEeCCCChhccccccH
Q 046427 194 TLAVMGFGKVGTEVARRAKGL-GMNVI-AHDPYAQA--DRARATGV-G-LVSFEEAI-STADFISLHMPLTPATSKMFND 266 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~-~-~~~l~ell-~~aD~V~l~~Plt~~t~~li~~ 266 (595)
+|||||+|.||+.+++.++.. ++++. ++|++... ..+...|. . +.++++++ .++|+|++|+|... ...++
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~-h~~~~-- 79 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSL-HFAQA-- 79 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGG-HHHHH--
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHH-HHHHH--
Confidence 799999999999999999865 57765 67876532 22334454 2 34899999 78999999999422 22121
Q ss_pred HHHhcCCCce-EEEec-cCCchhcHHHHHHHHhcC
Q 046427 267 EAFFKMKKGV-RIVNV-ARGGVVDEEALVRALDSG 299 (595)
Q Consensus 267 ~~l~~mk~ga-iliN~-arg~~vd~~aL~~aL~~g 299 (595)
...++.|. +++.- .--.+-+.++|.++.++.
T Consensus 80 --~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~ 112 (325)
T 2ho3_A 80 --KAALSAGKHVILEKPAVSQPQEWFDLIQTAEKN 112 (325)
T ss_dssp --HHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHT
T ss_pred --HHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHc
Confidence 22244554 45542 122333455666666554
No 203
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.09 E-value=0.0012 Score=60.22 Aligned_cols=99 Identities=14% Similarity=0.100 Sum_probs=70.6
Q ss_pred CCEEEEEeC----ChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccH
Q 046427 192 GKTLAVMGF----GKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFND 266 (595)
Q Consensus 192 gktvGIIGl----G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~ 266 (595)
-++|+|||. |++|..+++.++..|++|+..+|... .-.|+... +++++....|++++++|. +....++.+
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~----~i~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv~~ 96 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYE----EVLGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYVEQ 96 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS----EETTEECBSSGGGCSSCCSEEEECSCH-HHHHHHHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCC----eECCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHHHH
Confidence 579999999 79999999999999999887877541 11355543 799999899999999995 556666643
Q ss_pred HHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 267 EAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 267 ~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
..+ ....++++..+ . .++++.++.++..+
T Consensus 97 -~~~-~gi~~i~~~~g--~--~~~~l~~~a~~~Gi 125 (144)
T 2d59_A 97 -AIK-KGAKVVWFQYN--T--YNREASKKADEAGL 125 (144)
T ss_dssp -HHH-HTCSEEEECTT--C--CCHHHHHHHHHTTC
T ss_pred -HHH-cCCCEEEECCC--c--hHHHHHHHHHHcCC
Confidence 333 33345665532 2 25667777776544
No 204
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.09 E-value=0.0014 Score=68.72 Aligned_cols=64 Identities=22% Similarity=0.398 Sum_probs=51.1
Q ss_pred CEEEEEeCChHHHHHHHHHhcC-CCEEEE-ECCCCc-HHHHHHcCCcc-cCHHHhcc--ccCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL-GMNVIA-HDPYAQ-ADRARATGVGL-VSFEEAIS--TADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~-~d~~~~-~~~a~~~g~~~-~~l~ell~--~aD~V~l~~Pl 256 (595)
.+|||||+|.||+..++.++.. ++++.+ +|++.. .+.+.+.|+.. .+++++++ +.|+|++|+|.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~ 75 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPN 75 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCG
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCc
Confidence 4799999999999999999876 788764 688763 23445567754 48999998 79999999994
No 205
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.06 E-value=0.00066 Score=63.51 Aligned_cols=72 Identities=17% Similarity=0.251 Sum_probs=59.5
Q ss_pred cEEEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEEcCCC--CcHHHHHHHhcCCCcceEEEE
Q 046427 522 SIILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIGVDEE--PSREVLKKIGETPAIEEFVFL 593 (595)
Q Consensus 522 ~~Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~~d~~--~~~e~l~~L~~~~~v~~v~~i 593 (595)
|.|-+...|+||++++|+.+|+++|+||.++.++..+..+.+.+.+.++.. .-+.+.++|.++.+|.+|.-+
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d~~~leql~kQL~Kl~dV~~V~~~ 78 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGPDEIVEQITKQLNKLIEVVKLIDL 78 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEECHHHHHHHHHHHHHSTTEEEEEEG
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEeccHHHHHHHHHHhcCCCCEEEEEEc
Confidence 677788899999999999999999999999999877666677776666543 344788888999999888643
No 206
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.02 E-value=0.0013 Score=59.85 Aligned_cols=102 Identities=21% Similarity=0.286 Sum_probs=70.8
Q ss_pred cCCEEEEEeC----ChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhcccccc
Q 046427 191 VGKTLAVMGF----GKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFN 265 (595)
Q Consensus 191 ~gktvGIIGl----G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~ 265 (595)
+-++|+|||. |++|..+++.++..|++|+..+|....+ .-.|+... +++|+-...|++++++|. +....+++
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~--~i~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~~ 88 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGE--ELFGEEAVASLLDLKEPVDILDVFRPP-SALMDHLP 88 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTS--EETTEECBSSGGGCCSCCSEEEECSCH-HHHTTTHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccC--cCCCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHHH
Confidence 3568999999 8999999999999999988777752011 11355543 799998899999999995 66777774
Q ss_pred HHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 266 DEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 266 ~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
+ ..+ .....++++.+-. ++++.+..++..+
T Consensus 89 ~-~~~-~gi~~i~~~~g~~----~~~~~~~a~~~Gi 118 (140)
T 1iuk_A 89 E-VLA-LRPGLVWLQSGIR----HPEFEKALKEAGI 118 (140)
T ss_dssp H-HHH-HCCSCEEECTTCC----CHHHHHHHHHTTC
T ss_pred H-HHH-cCCCEEEEcCCcC----HHHHHHHHHHcCC
Confidence 3 333 3334566664332 4566666665544
No 207
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.00 E-value=0.00068 Score=70.72 Aligned_cols=64 Identities=20% Similarity=0.279 Sum_probs=51.1
Q ss_pred CEEEEEeCChHHHHHHHHHhcC--CCEEE-EECCCCcH--HHHHHcCCcc-cCHHHhcc--ccCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL--GMNVI-AHDPYAQA--DRARATGVGL-VSFEEAIS--TADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~--G~~V~-~~d~~~~~--~~a~~~g~~~-~~l~ell~--~aD~V~l~~Pl 256 (595)
.+|||||+|.||+..++.++.. +++++ ++|++... ..+.+.|+.. .+++++++ ++|+|++|+|.
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 85 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPS 85 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCc
Confidence 4799999999999999999876 78866 68887632 3345567743 48999997 79999999994
No 208
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.99 E-value=0.00087 Score=68.09 Aligned_cols=94 Identities=14% Similarity=0.187 Sum_probs=65.1
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH--HHHHHcC----------CcccCHHHhccccCEEEEeCCC
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA--DRARATG----------VGLVSFEEAISTADFISLHMPL 256 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g----------~~~~~l~ell~~aD~V~l~~Pl 256 (595)
++.||++.|+|.|.||+++|+.|...| +|+++|++... +.+.+.+ +...++.+.+.++|+|+.++|.
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~ 203 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI 203 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCC
Confidence 578999999999999999999999999 99999987522 1111111 1122345677899999999986
Q ss_pred Chhcc---ccccHHHHhcCCCceEEEeccCCc
Q 046427 257 TPATS---KMFNDEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 257 t~~t~---~li~~~~l~~mk~gailiN~arg~ 285 (595)
..... ..+. ..+.++++.+++|+.-..
T Consensus 204 ~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~p 233 (287)
T 1nvt_A 204 GMYPNIDVEPIV--KAEKLREDMVVMDLIYNP 233 (287)
T ss_dssp TCTTCCSSCCSS--CSTTCCSSSEEEECCCSS
T ss_pred CCCCCCCCCCCC--CHHHcCCCCEEEEeeeCC
Confidence 43210 0120 134578889999988643
No 209
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=96.98 E-value=0.00012 Score=74.63 Aligned_cols=92 Identities=16% Similarity=0.121 Sum_probs=64.0
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCc---c-cCHHHhc-cccCEEEEeCCCChhccccccH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVG---L-VSFEEAI-STADFISLHMPLTPATSKMFND 266 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~---~-~~l~ell-~~aD~V~l~~Plt~~t~~li~~ 266 (595)
++|+|||.|.||..+|..|...|.+|..|++... .+.....|.. . .+..+.+ +.+|+|++++|.. ++...+..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~-~~~~~l~~ 81 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTH-QLDAVIPH 81 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGG-GHHHHGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCcc-CHHHHHHH
Confidence 5799999999999999999988899999998742 1111122321 1 1334444 8899999999954 45555532
Q ss_pred HHHhcCCCceEEEeccCCch
Q 046427 267 EAFFKMKKGVRIVNVARGGV 286 (595)
Q Consensus 267 ~~l~~mk~gailiN~arg~~ 286 (595)
.-..++++.+||.+.-|=-
T Consensus 82 -l~~~l~~~~~iv~~~nGi~ 100 (294)
T 3g17_A 82 -LTYLAHEDTLIILAQNGYG 100 (294)
T ss_dssp -HHHHEEEEEEEEECCSSCC
T ss_pred -HHHhhCCCCEEEEeccCcc
Confidence 2334678889999987643
No 210
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.98 E-value=0.0017 Score=67.84 Aligned_cols=104 Identities=10% Similarity=0.063 Sum_probs=66.3
Q ss_pred CCEEEEEeCChHHH-HHHHHHhcC-CCEEE-EECCCCc--HHHHHHcCCcc-cCHHHhcc--ccCEEEEeCCCChhcccc
Q 046427 192 GKTLAVMGFGKVGT-EVARRAKGL-GMNVI-AHDPYAQ--ADRARATGVGL-VSFEEAIS--TADFISLHMPLTPATSKM 263 (595)
Q Consensus 192 gktvGIIGlG~IG~-~vA~~l~~~-G~~V~-~~d~~~~--~~~a~~~g~~~-~~l~ell~--~aD~V~l~~Plt~~t~~l 263 (595)
-.+|||||+|.||+ .+++.++.. ++++. ++|++.. ...+.+.|+.. .+++++++ +.|+|++|+|... -..+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~-h~~~ 105 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVL-HAEW 105 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGG-HHHH
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHH-HHHH
Confidence 35899999999998 788888866 78876 5788653 23345567754 48999997 5899999999432 2222
Q ss_pred ccHHHHhcCCCce-EEEecc-CCchhcHHHHHHHHhcCC
Q 046427 264 FNDEAFFKMKKGV-RIVNVA-RGGVVDEEALVRALDSGI 300 (595)
Q Consensus 264 i~~~~l~~mk~ga-iliN~a-rg~~vd~~aL~~aL~~g~ 300 (595)
+ . ..++.|. +++.-- --.+-+.++|.++.++..
T Consensus 106 ~-~---~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g 140 (350)
T 3rc1_A 106 I-D---RALRAGKHVLAEKPLTTDRPQAERLFAVARERG 140 (350)
T ss_dssp H-H---HHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTT
T ss_pred H-H---HHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 2 1 2233443 443321 223345566777665543
No 211
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.97 E-value=0.0015 Score=66.99 Aligned_cols=110 Identities=11% Similarity=0.090 Sum_probs=65.0
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCC--EEEEECCCCcHH--HHHHc--C------Ccc--cCHHHhccccCEEEEeCCCCh
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGM--NVIAHDPYAQAD--RARAT--G------VGL--VSFEEAISTADFISLHMPLTP 258 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~--~a~~~--g------~~~--~~l~ell~~aD~V~l~~Plt~ 258 (595)
++|+|||.|.+|..+|..+...|+ +|..||.+.... .+.+. . ... .+ .+.+++||+|+++++...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVIi~~~~~~ 79 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVILTAGANQ 79 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEEECC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEEEcCCCCC
Confidence 479999999999999999998888 999999875311 11211 1 111 13 367899999999996322
Q ss_pred h-----------cccccc--HHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCeeE
Q 046427 259 A-----------TSKMFN--DEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGIISQ 303 (595)
Q Consensus 259 ~-----------t~~li~--~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i~g 303 (595)
. +..++. .+.+....|++++++++-+.=+....+.+.....++.|
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG 137 (304)
T 2v6b_A 80 KPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIG 137 (304)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEE
T ss_pred CCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcEEe
Confidence 1 111111 12233346888998875443333444444444444433
No 212
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.95 E-value=0.0021 Score=66.44 Aligned_cols=102 Identities=18% Similarity=0.302 Sum_probs=63.9
Q ss_pred CEEEEEeCChHHHHHHHHHh-c-CCCEEE-EECCCCcH--HHHHHcCCc--ccCHHHhcc--ccCEEEEeCCCChhcccc
Q 046427 193 KTLAVMGFGKVGTEVARRAK-G-LGMNVI-AHDPYAQA--DRARATGVG--LVSFEEAIS--TADFISLHMPLTPATSKM 263 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~-~-~G~~V~-~~d~~~~~--~~a~~~g~~--~~~l~ell~--~aD~V~l~~Plt~~t~~l 263 (595)
.+|||||+|.||+..++.++ . -+++++ ++|++... ..+.+.|+. +.+++++++ ++|+|++|+|... ...+
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~-h~~~ 87 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPF-HPEM 87 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGG-HHHH
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHh-HHHH
Confidence 47999999999999999987 5 478855 57987632 234455762 348999997 6999999999432 2211
Q ss_pred ccHHHHhcCCCce-EEEec-cCCchhcHHHHHHHHhcC
Q 046427 264 FNDEAFFKMKKGV-RIVNV-ARGGVVDEEALVRALDSG 299 (595)
Q Consensus 264 i~~~~l~~mk~ga-iliN~-arg~~vd~~aL~~aL~~g 299 (595)
....++.|. +++.- .-...-+.++|.++.++.
T Consensus 88 ----~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~ 121 (346)
T 3cea_A 88 ----TIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSH 121 (346)
T ss_dssp ----HHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTC
T ss_pred ----HHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhC
Confidence 223345564 34431 111222344566666554
No 213
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=96.93 E-value=0.00094 Score=55.44 Aligned_cols=62 Identities=19% Similarity=0.212 Sum_probs=47.5
Q ss_pred cEEEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEEc--CCCC-cHHHHHHHhcCC
Q 046427 522 SIILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIGV--DEEP-SREVLKKIGETP 585 (595)
Q Consensus 522 ~~Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~~--d~~~-~~e~l~~L~~~~ 585 (595)
..|.+..+|+||+++.|+++|+++|+||.+++..+.. +...+.+.+ ++.. -++++++|+++.
T Consensus 6 ~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~--~~~~~~i~v~~~~~~~l~~l~~~L~~~~ 70 (91)
T 1zpv_A 6 AIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLD--EYFTMMAVVSSDEKQDFTYLRNEFEAFG 70 (91)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEET--TEEEEEEEEEESSCCCHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEc--CEEEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 4567788999999999999999999999999998765 456666555 4322 347777777654
No 214
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=96.93 E-value=0.007 Score=61.93 Aligned_cols=127 Identities=14% Similarity=0.098 Sum_probs=86.9
Q ss_pred HhCCceEEeC-CCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeC---ChHHHHHHHHH
Q 046427 136 TEHGCLVVNA-PTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGF---GKVGTEVARRA 211 (595)
Q Consensus 136 ~~~gI~V~n~-p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGl---G~IG~~vA~~l 211 (595)
.-.+|+|.|. -|....++ .+++=++.+.++ .| .+.|.+|++||= |++..+++..+
T Consensus 113 ~~~~vPVINaG~g~~~HPt--Q~LaDl~Ti~e~------------------~g-~l~gl~va~vGD~~~~rva~Sl~~~~ 171 (299)
T 1pg5_A 113 EISDIPVINAGDGKHEHPT--QAVIDIYTINKH------------------FN-TIDGLVFALLGDLKYARTVNSLLRIL 171 (299)
T ss_dssp HHCSSCEEEEEETTTBCHH--HHHHHHHHHHHH------------------HS-CSTTCEEEEEECCSSCHHHHHHHHHG
T ss_pred HhCCCCEEeCCCCCCcCcH--HHHHHHHHHHHH------------------hC-CcCCcEEEEECCCCCCchHHHHHHHH
Confidence 4457899998 55444433 223333333331 12 478999999998 59999999999
Q ss_pred hcC-CCEEEEECCCC---cHHHHHHcCCcc---cCHHHhccccCEEEEeCCCChhc-----------cccccHHHHhcCC
Q 046427 212 KGL-GMNVIAHDPYA---QADRARATGVGL---VSFEEAISTADFISLHMPLTPAT-----------SKMFNDEAFFKMK 273 (595)
Q Consensus 212 ~~~-G~~V~~~d~~~---~~~~a~~~g~~~---~~l~ell~~aD~V~l~~Plt~~t-----------~~li~~~~l~~mk 273 (595)
..+ |++|....|.. +.....+.|... .++++++++||+|..-.=-.+.. ...++.+.++.+|
T Consensus 172 ~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~ 251 (299)
T 1pg5_A 172 TRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMK 251 (299)
T ss_dssp GGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSC
T ss_pred HhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccccccCHHHHHHhhcCcccCHHHHHhcC
Confidence 999 99999998743 222234556542 47999999999998865432110 2456788888888
Q ss_pred CceEEEeccC
Q 046427 274 KGVRIVNVAR 283 (595)
Q Consensus 274 ~gailiN~ar 283 (595)
++++|.-|.-
T Consensus 252 ~~ai~mH~lP 261 (299)
T 1pg5_A 252 KDSIILHPLP 261 (299)
T ss_dssp TTCEEECCSC
T ss_pred CCCEEECCCC
Confidence 8888888863
No 215
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.92 E-value=0.003 Score=64.20 Aligned_cols=92 Identities=16% Similarity=0.183 Sum_probs=60.5
Q ss_pred eeecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcHHHHHHcCCcccCHHHh--ccccCEEEEeCCCC--hhcc-
Q 046427 188 VSLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQADRARATGVGLVSFEEA--ISTADFISLHMPLT--PATS- 261 (595)
Q Consensus 188 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a~~~g~~~~~l~el--l~~aD~V~l~~Plt--~~t~- 261 (595)
.++.||++.|+|.|.+|++++..|...|. +|.+++|...........+...+++++ + ++|+|+.++|.- +...
T Consensus 118 ~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~l-~~DivInaTp~Gm~~~~~~ 196 (282)
T 3fbt_A 118 VEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSNL-KGDVIINCTPKGMYPKEGE 196 (282)
T ss_dssp CCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTTC-CCSEEEECSSTTSTTSTTC
T ss_pred CCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHhc-cCCEEEECCccCccCCCcc
Confidence 45889999999999999999999999998 999999875332222222222233332 4 899999999862 2111
Q ss_pred ccccHHHHhcCCCceEEEeccC
Q 046427 262 KMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 262 ~li~~~~l~~mk~gailiN~ar 283 (595)
-.+..+. ++++.+++|+.-
T Consensus 197 ~pi~~~~---l~~~~~v~DlvY 215 (282)
T 3fbt_A 197 SPVDKEV---VAKFSSAVDLIY 215 (282)
T ss_dssp CSSCHHH---HTTCSEEEESCC
T ss_pred CCCCHHH---cCCCCEEEEEee
Confidence 1233333 356666666653
No 216
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.91 E-value=0.0012 Score=67.27 Aligned_cols=68 Identities=21% Similarity=0.184 Sum_probs=53.0
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcHH--HHHHc-----CCc--c---cCHHHhccccCEEEEeCC
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQAD--RARAT-----GVG--L---VSFEEAISTADFISLHMP 255 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~--~a~~~-----g~~--~---~~l~ell~~aD~V~l~~P 255 (595)
.+.||++.|+|.|.+|++++..|...|. +|.+++++.... .+.+. ++. . .++++.++++|+|+.++|
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSS
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCC
Confidence 5789999999999999999999999998 799999875321 12221 111 1 267788899999999999
Q ss_pred C
Q 046427 256 L 256 (595)
Q Consensus 256 l 256 (595)
.
T Consensus 204 ~ 204 (283)
T 3jyo_A 204 M 204 (283)
T ss_dssp T
T ss_pred C
Confidence 6
No 217
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.90 E-value=0.0021 Score=66.36 Aligned_cols=103 Identities=13% Similarity=0.028 Sum_probs=63.8
Q ss_pred CEEEEEeCChHHHHHHHHHhcC-CCEEE-EECCCCc--HHHHHHcCCc--ccCHHHhcc--ccCEEEEeCCCChhccccc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL-GMNVI-AHDPYAQ--ADRARATGVG--LVSFEEAIS--TADFISLHMPLTPATSKMF 264 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~--~~~a~~~g~~--~~~l~ell~--~aD~V~l~~Plt~~t~~li 264 (595)
.++||||+|.||+..++.++.. ++++. ++|++.. ...+.+.|+. +.++++++. +.|+|++|+|... ...++
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~-h~~~~ 84 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQD-HYKVA 84 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGG-HHHHH
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHH-HHHHH
Confidence 4799999999999999988754 56766 5788763 2344556764 458999998 7999999999432 22222
Q ss_pred cHHHHhcCCCce-EEEec-cCCchhcHHHHHHHHhcCC
Q 046427 265 NDEAFFKMKKGV-RIVNV-ARGGVVDEEALVRALDSGI 300 (595)
Q Consensus 265 ~~~~l~~mk~ga-iliN~-arg~~vd~~aL~~aL~~g~ 300 (595)
...++.|. +++.- ---.+-+.++|.++.++..
T Consensus 85 ----~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~ 118 (329)
T 3evn_A 85 ----KAALLAGKHVLVEKPFTLTYDQANELFALAESCN 118 (329)
T ss_dssp ----HHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTT
T ss_pred ----HHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcC
Confidence 22244443 33321 1223334556666665543
No 218
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.87 E-value=0.0027 Score=65.93 Aligned_cols=90 Identities=20% Similarity=0.234 Sum_probs=60.8
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcH-HH-HH-------HcC----Ccc-cCHHHhccccCEEEEeC--C
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQA-DR-AR-------ATG----VGL-VSFEEAISTADFISLHM--P 255 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~-a~-------~~g----~~~-~~l~ell~~aD~V~l~~--P 255 (595)
++|+|||.|.+|..+|..+...|+ +|..||.+... +. .. ..+ +.. .++++.+++||+|++++ |
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~p 89 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGLT 89 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCCC
Confidence 589999999999999999998787 89999987632 11 01 011 112 47888899999999999 6
Q ss_pred CChhc------ccc-cc------H---HHHhcCCCceEEEecc
Q 046427 256 LTPAT------SKM-FN------D---EAFFKMKKGVRIVNVA 282 (595)
Q Consensus 256 lt~~t------~~l-i~------~---~~l~~mk~gailiN~a 282 (595)
..+.- +.- +. + +.+....|++++++++
T Consensus 90 ~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 132 (331)
T 1pzg_A 90 KVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT 132 (331)
T ss_dssp SCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 54421 111 00 1 1233345889998875
No 219
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=96.85 E-value=0.0013 Score=67.35 Aligned_cols=100 Identities=14% Similarity=0.166 Sum_probs=61.1
Q ss_pred CEEEEEeCChHHHHHHHHHhc-CCCEEE-EECCCCcHHHHHHcCCcc---cCHHHhccccCEEEEeCCCChhccccccHH
Q 046427 193 KTLAVMGFGKVGTEVARRAKG-LGMNVI-AHDPYAQADRARATGVGL---VSFEEAISTADFISLHMPLTPATSKMFNDE 267 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~-~G~~V~-~~d~~~~~~~a~~~g~~~---~~l~ell~~aD~V~l~~Plt~~t~~li~~~ 267 (595)
.+|||||+|+||+.+++.++. -++++. ++|++... +...|+.+ .++.++ .++|+|++|+|... .. +.
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~--~~~~g~~~~~~~~l~~~-~~~DvViiatp~~~-h~----~~ 81 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAE--VPFELQPFRVVSDIEQL-ESVDVALVCSPSRE-VE----RT 81 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC---------CCTTSCEESSGGGS-SSCCEEEECSCHHH-HH----HH
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHH--HHHcCCCcCCHHHHHhC-CCCCEEEECCCchh-hH----HH
Confidence 489999999999999999886 478887 58886532 22256542 244444 68999999999422 22 12
Q ss_pred HHhcCCCceEEEeccC--Cch-hcHHHHHHHHhcCC
Q 046427 268 AFFKMKKGVRIVNVAR--GGV-VDEEALVRALDSGI 300 (595)
Q Consensus 268 ~l~~mk~gailiN~ar--g~~-vd~~aL~~aL~~g~ 300 (595)
....++.|.-+++..- +.. .+.+.|.++.++..
T Consensus 82 ~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g 117 (304)
T 3bio_A 82 ALEILKKGICTADSFDIHDGILALRRSLGDAAGKSG 117 (304)
T ss_dssp HHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCC
Confidence 2234666777776532 222 23456666665543
No 220
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.76 E-value=0.0039 Score=65.14 Aligned_cols=65 Identities=15% Similarity=0.276 Sum_probs=50.5
Q ss_pred CCEEEEEeCChHHHHHHHHHh-c-CCCEEE-EECCCCcH--HHHHHcC--Cc-ccCHHHhcc--ccCEEEEeCCC
Q 046427 192 GKTLAVMGFGKVGTEVARRAK-G-LGMNVI-AHDPYAQA--DRARATG--VG-LVSFEEAIS--TADFISLHMPL 256 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~-~-~G~~V~-~~d~~~~~--~~a~~~g--~~-~~~l~ell~--~aD~V~l~~Pl 256 (595)
-.+|||||+|.||+..++.+. . -+++++ ++|++... ..+.+.| .. +.+++++++ +.|+|++|+|.
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~ 97 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASN 97 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCG
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCc
Confidence 358999999999999999988 5 478877 58987643 3345566 33 458999997 48999999994
No 221
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.76 E-value=0.0017 Score=62.85 Aligned_cols=66 Identities=14% Similarity=0.214 Sum_probs=49.4
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HH-HHHcCCccc-----C---HHHh-ccccCEEEEeCCCCh
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DR-ARATGVGLV-----S---FEEA-ISTADFISLHMPLTP 258 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~-a~~~g~~~~-----~---l~el-l~~aD~V~l~~Plt~ 258 (595)
++|.|+|+|.+|+.+|+.|...|.+|+++|++... +. ....++..+ + +.++ +.+||+|++++|...
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDE 77 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcH
Confidence 36899999999999999999999999999987632 22 233454321 2 4444 778999999998544
No 222
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.74 E-value=0.0034 Score=64.80 Aligned_cols=96 Identities=14% Similarity=0.206 Sum_probs=63.4
Q ss_pred eeecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCc-HHHHH----H----cCC--ccc---C---HHHhccccCE
Q 046427 188 VSLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQ-ADRAR----A----TGV--GLV---S---FEEAISTADF 249 (595)
Q Consensus 188 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~-~~~a~----~----~g~--~~~---~---l~ell~~aD~ 249 (595)
.++.||++.|+|.|.+|++++..|...|. +|.+++|... .+.+. + .++ ... + +.+.++++|+
T Consensus 150 ~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDi 229 (315)
T 3tnl_A 150 HDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVI 229 (315)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred CCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCE
Confidence 46889999999999999999999999998 8999998731 22221 1 121 111 2 4566789999
Q ss_pred EEEeCCCC--hhc-cccccHHHHhcCCCceEEEeccCCc
Q 046427 250 ISLHMPLT--PAT-SKMFNDEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 250 V~l~~Plt--~~t-~~li~~~~l~~mk~gailiN~arg~ 285 (595)
|+.++|.. +.. ...+. ....++++.+++|+.-..
T Consensus 230 IINaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P 266 (315)
T 3tnl_A 230 FTNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKP 266 (315)
T ss_dssp EEECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSS
T ss_pred EEECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCC
Confidence 99999953 111 11121 123356777777776443
No 223
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=96.74 E-value=0.002 Score=68.16 Aligned_cols=122 Identities=20% Similarity=0.171 Sum_probs=90.0
Q ss_pred CCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHHHHhcCCC-
Q 046427 138 HGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGM- 216 (595)
Q Consensus 138 ~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~- 216 (595)
..|.|.|+ --..+|=-+++-+++..| ..|..+...+|.|+|.|..|..+|+.+.++|.
T Consensus 155 ~~ipvf~D---DiqGTa~V~lAall~al~------------------l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~ 213 (398)
T 2a9f_A 155 CHIPVFHD---DQHGTAIVVLAAIFNSLK------------------LLKKSLDEVSIVVNGGGSAGLSITRKLLAAGAT 213 (398)
T ss_dssp CSSCEEEH---HHHHHHHHHHHHHHHHHH------------------TTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCC
T ss_pred CCcceecc---hhhhHHHHHHHHHHHHHH------------------HhCCCCCccEEEEECCCHHHHHHHHHHHHcCCC
Confidence 35889883 223455556666666555 24557888999999999999999999999999
Q ss_pred EEEEECCCC----------c---HHHHHHcCC--cccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEec
Q 046427 217 NVIAHDPYA----------Q---ADRARATGV--GLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNV 281 (595)
Q Consensus 217 ~V~~~d~~~----------~---~~~a~~~g~--~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~ 281 (595)
+|+.+|++. . ...+..... ...+|.|+++.+|+++=+- +-+++.++.++.|+++++|..+
T Consensus 214 ~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG~S-----apgl~T~EmVk~Ma~~pIIfal 288 (398)
T 2a9f_A 214 KVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIGVS-----APGVLKAEWISKMAARPVIFAM 288 (398)
T ss_dssp EEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEECC-----STTCCCHHHHHTSCSSCEEEEC
T ss_pred eEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEecC-----CCCCCCHHHHHhhCCCCEEEEC
Confidence 999998752 0 011222111 1236999999999987652 3589999999999999999999
Q ss_pred cCCc
Q 046427 282 ARGG 285 (595)
Q Consensus 282 arg~ 285 (595)
|.-.
T Consensus 289 sNPt 292 (398)
T 2a9f_A 289 ANPI 292 (398)
T ss_dssp CSSS
T ss_pred CCCC
Confidence 9754
No 224
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.74 E-value=0.0035 Score=59.88 Aligned_cols=73 Identities=15% Similarity=0.271 Sum_probs=59.2
Q ss_pred ccEEEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEEcC--CCCcHHHHHHHhcCCCcceEEEE
Q 046427 521 GSIILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIGVD--EEPSREVLKKIGETPAIEEFVFL 593 (595)
Q Consensus 521 ~~~Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~~d--~~~~~e~l~~L~~~~~v~~v~~i 593 (595)
.+.|-+.-.|+||++++|+.+|.++|+||..+.++.....+..-+.|.++ +..-+++.++|.++..|..|..+
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~e~~ieqL~kQL~KLidVikV~dl 103 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGDDKTIEQIEKQAYKLVEVVKVTPI 103 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEECTTHHHHHHHHHTTSTTEEEEEEC
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECCHHHHHHHHHHhcCcCceEEEEEe
Confidence 47788888999999999999999999999999998777666676655554 44556888888888888777654
No 225
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=96.74 E-value=0.022 Score=58.49 Aligned_cols=127 Identities=18% Similarity=0.179 Sum_probs=86.1
Q ss_pred HHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCC--hHHHHHHHHHh
Q 046427 135 ATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFG--KVGTEVARRAK 212 (595)
Q Consensus 135 a~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~l~ 212 (595)
|.-.+|+|.|.-+....++ .+++=++.+.++. | .+.|.+|++||=| ++..+++..+.
T Consensus 112 A~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~------------------g-~l~gl~va~vGD~~~rva~Sl~~~~~ 170 (307)
T 2i6u_A 112 ASVATVPVINALSDEFHPC--QVLADLQTIAERK------------------G-ALRGLRLSYFGDGANNMAHSLLLGGV 170 (307)
T ss_dssp HHHCSSCEEESCCSSCCHH--HHHHHHHHHHHHH------------------S-CCTTCEEEEESCTTSHHHHHHHHHHH
T ss_pred HhhCCCCEEcCCCCCcCcc--HHHHHHHHHHHHh------------------C-CcCCeEEEEECCCCcCcHHHHHHHHH
Confidence 3445789999766444433 2333334333311 2 4789999999996 99999999999
Q ss_pred cCCCEEEEECCCC---cHHH---H----HHcCCc---ccCHHHhccccCEEEEeCCC-------Chh-----ccccccHH
Q 046427 213 GLGMNVIAHDPYA---QADR---A----RATGVG---LVSFEEAISTADFISLHMPL-------TPA-----TSKMFNDE 267 (595)
Q Consensus 213 ~~G~~V~~~d~~~---~~~~---a----~~~g~~---~~~l~ell~~aD~V~l~~Pl-------t~~-----t~~li~~~ 267 (595)
.+|++|....|.. +.+. + ++.|.. ..++++++++||+|..-.=. .++ ....++.+
T Consensus 171 ~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~~ 250 (307)
T 2i6u_A 171 TAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDGLDRVKPFRPFQLNSR 250 (307)
T ss_dssp HTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCTTSCCCSSGGGGGGCBCHH
T ss_pred HCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEecceecCCcccchHHHHHHHhhcCCCHH
Confidence 9999999988753 2211 1 255643 34899999999999983320 011 12456788
Q ss_pred HHhcCCCceEEEecc
Q 046427 268 AFFKMKKGVRIVNVA 282 (595)
Q Consensus 268 ~l~~mk~gailiN~a 282 (595)
.++.+|++++|.-|.
T Consensus 251 ~l~~a~~~ai~mH~l 265 (307)
T 2i6u_A 251 LLALADSDAIVLHCL 265 (307)
T ss_dssp HHHHSCTTCEEEECS
T ss_pred HHhhcCCCcEEECCC
Confidence 888888888888887
No 226
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=96.72 E-value=0.014 Score=59.64 Aligned_cols=127 Identities=17% Similarity=0.097 Sum_probs=86.6
Q ss_pred HHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeC-ChHHHHHHHHHhc
Q 046427 135 ATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGF-GKVGTEVARRAKG 213 (595)
Q Consensus 135 a~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGl-G~IG~~vA~~l~~ 213 (595)
|...+|+|.|.-+....++ .+++=++.+.++. | .+.|.+|++||= +++.++.+..+..
T Consensus 118 a~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~------------------g-~l~gl~ia~vGD~~rva~Sl~~~~~~ 176 (301)
T 2ef0_A 118 ARHAKVPVVNALSDRAHPL--QALADLLTLKEVF------------------G-GLAGLEVAWVGDGNNVLNSLLEVAPL 176 (301)
T ss_dssp HHHCSSCEEEEECSSCCHH--HHHHHHHHHHHHH------------------S-CCTTCEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHCCCCEEeCCCCccCch--HHHHHHHHHHHHh------------------C-CcCCcEEEEECCCchhHHHHHHHHHH
Confidence 3345789999765444333 2333333333311 2 478999999998 8999999999999
Q ss_pred CCCEEEEECCCC---cHHHHHHcCCc-ccCHHHhccccCEEEEeCC-C-------Ch--h--ccccccHHHHhcCCCceE
Q 046427 214 LGMNVIAHDPYA---QADRARATGVG-LVSFEEAISTADFISLHMP-L-------TP--A--TSKMFNDEAFFKMKKGVR 277 (595)
Q Consensus 214 ~G~~V~~~d~~~---~~~~a~~~g~~-~~~l~ell~~aD~V~l~~P-l-------t~--~--t~~li~~~~l~~mk~gai 277 (595)
+|++|....|.. +.+......+. ..++++.+++||+|..-.= . .. + ....++.+.++.+|++++
T Consensus 177 ~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai 256 (301)
T 2ef0_A 177 AGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRPEGV 256 (301)
T ss_dssp HTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC--------CHHHHHTTTCCBCHHHHTTSCTTCE
T ss_pred cCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccchhHHHHHhhccccCHHHHHhcCCCcE
Confidence 999999988753 22222222354 3489999999999998332 0 00 0 135578888999999999
Q ss_pred EEecc
Q 046427 278 IVNVA 282 (595)
Q Consensus 278 liN~a 282 (595)
|.-|.
T Consensus 257 ~mHpl 261 (301)
T 2ef0_A 257 FLHCL 261 (301)
T ss_dssp EEECS
T ss_pred EECCC
Confidence 99998
No 227
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.72 E-value=0.002 Score=66.40 Aligned_cols=65 Identities=15% Similarity=0.168 Sum_probs=46.3
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCC--EEEEECCCCcHHHHHHcC----Cc-------c-cCHHHhccccCEEEEeCCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGM--NVIAHDPYAQADRARATG----VG-------L-VSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a~~~g----~~-------~-~~l~ell~~aD~V~l~~Plt 257 (595)
++|+|||.|.||.++|..++..|. +|..||.+.........+ .. . .+..+.+++||+|++++|..
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 589999999999999999986554 899999875322111111 11 0 13457799999999998754
No 228
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.71 E-value=0.002 Score=64.41 Aligned_cols=98 Identities=14% Similarity=0.175 Sum_probs=68.9
Q ss_pred ecCCEEEEEeCChHHHHHHHHHhcCCCEE-EEECCCCcHHHHHHcCCcc-cCHHHhccccCEEEEeCCCChhccccccHH
Q 046427 190 LVGKTLAVMGFGKVGTEVARRAKGLGMNV-IAHDPYAQADRARATGVGL-VSFEEAISTADFISLHMPLTPATSKMFNDE 267 (595)
Q Consensus 190 l~gktvGIIGlG~IG~~vA~~l~~~G~~V-~~~d~~~~~~~a~~~g~~~-~~l~ell~~aD~V~l~~Plt~~t~~li~~~ 267 (595)
-+..+|+++|+|.||+.+++. . ++++ .+|+ .... +.|+.. .+++++++++|+|+=|.+ .+ -+.+.
T Consensus 10 ~~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~-~k~g----elgv~a~~d~d~lla~pD~VVe~A~-~~----av~e~ 76 (253)
T 1j5p_A 10 HHHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD-RISK----DIPGVVRLDEFQVPSDVSTVVECAS-PE----AVKEY 76 (253)
T ss_dssp -CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC-SSCC----CCSSSEECSSCCCCTTCCEEEECSC-HH----HHHHH
T ss_pred cccceEEEECcCHHHHHHHhc--C-CcEEEEEEe-cccc----ccCceeeCCHHHHhhCCCEEEECCC-HH----HHHHH
Confidence 345799999999999999998 4 7775 4567 2211 226653 379999999999988774 22 22233
Q ss_pred HHhcCCCceEEEeccCCchhcH---HHHHHHHhcCC
Q 046427 268 AFFKMKKGVRIVNVARGGVVDE---EALVRALDSGI 300 (595)
Q Consensus 268 ~l~~mk~gailiN~arg~~vd~---~aL~~aL~~g~ 300 (595)
....|+.|.-++-++-|.+.|. +.|.++.+.|.
T Consensus 77 ~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg 112 (253)
T 1j5p_A 77 SLQILKNPVNYIIISTSAFADEVFRERFFSELKNSP 112 (253)
T ss_dssp HHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCS
T ss_pred HHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCC
Confidence 4455899999999999888875 45566655553
No 229
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.70 E-value=0.0042 Score=64.24 Aligned_cols=62 Identities=16% Similarity=0.259 Sum_probs=46.4
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcHHH--H---HH----c--C--Ccc-cCHHHhccccCEEEEeCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQADR--A---RA----T--G--VGL-VSFEEAISTADFISLHMP 255 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~--a---~~----~--g--~~~-~~l~ell~~aD~V~l~~P 255 (595)
++|+|||.|.+|..+|..+...|+ +|..||.+..... + .+ . . +.. .++ +.+++||+|+++++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g 81 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAG 81 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 589999999999999999998887 8999998753211 0 00 1 1 122 356 78999999999983
No 230
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.68 E-value=0.0011 Score=67.84 Aligned_cols=100 Identities=16% Similarity=0.257 Sum_probs=61.0
Q ss_pred CEEEEEeCChHHHHHHHHHhcC-CCEEE-EECCCCcHH-HHHHcCCc-ccCHHHhcc--ccCEEEEeCCCChhccccccH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL-GMNVI-AHDPYAQAD-RARATGVG-LVSFEEAIS--TADFISLHMPLTPATSKMFND 266 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~~-~a~~~g~~-~~~l~ell~--~aD~V~l~~Plt~~t~~li~~ 266 (595)
.+|||||+|.||+.+++.++.. +++++ ++|++.... ...+. +. +.+++++++ ++|+|++|+|... ...+
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~tp~~~-h~~~--- 85 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVIIATPPAT-HAEI--- 85 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEEEESCGGG-HHHH---
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEEEeCChHH-HHHH---
Confidence 3799999999999999999875 67755 688764221 11111 32 347899986 7999999999432 2212
Q ss_pred HHHhcCCCce-EEEec-cCCchhcHHHHHHHHhc
Q 046427 267 EAFFKMKKGV-RIVNV-ARGGVVDEEALVRALDS 298 (595)
Q Consensus 267 ~~l~~mk~ga-iliN~-arg~~vd~~aL~~aL~~ 298 (595)
....++.|. +++.- .--.+-+.++|.++.++
T Consensus 86 -~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~ 118 (315)
T 3c1a_A 86 -TLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKA 118 (315)
T ss_dssp -HHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHH
T ss_pred -HHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHH
Confidence 122355564 45441 12233344566666544
No 231
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.67 E-value=0.002 Score=69.10 Aligned_cols=90 Identities=19% Similarity=0.277 Sum_probs=64.7
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCccc-----C---HHHh-ccccCEEEEeCCCChhcc
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGLV-----S---FEEA-ISTADFISLHMPLTPATS 261 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-----~---l~el-l~~aD~V~l~~Plt~~t~ 261 (595)
+.+|.|+|+|++|+.+|+.|+..|.+|++.|.+.. .+.+.+.|+..+ + |.++ +.+||+|++++|....+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 35699999999999999999999999999998863 345566676432 2 4444 788999999999644333
Q ss_pred ccccHHHHhcCCCceEEEeccC
Q 046427 262 KMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 262 ~li~~~~l~~mk~gailiN~ar 283 (595)
. -......+.+...+|--++
T Consensus 84 ~--i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 84 Q--LTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp H--HHHHHHHHCTTCEEEEEES
T ss_pred H--HHHHHHHhCCCCeEEEEEC
Confidence 2 2344555777766665444
No 232
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.67 E-value=0.0043 Score=64.34 Aligned_cols=63 Identities=14% Similarity=0.248 Sum_probs=47.3
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcHHHH------H---Hc--C--Ccc-cCHHHhccccCEEEEeCC
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQADRA------R---AT--G--VGL-VSFEEAISTADFISLHMP 255 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a------~---~~--g--~~~-~~l~ell~~aD~V~l~~P 255 (595)
.++|+|||.|.+|..+|..+...|+ +|..||.+...... . .. . +.. .++ +.+++||+|+++++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg 91 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAG 91 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCC
Confidence 3689999999999999999998888 99999987632111 0 00 1 222 356 78999999999994
No 233
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=96.67 E-value=0.0045 Score=64.84 Aligned_cols=102 Identities=19% Similarity=0.305 Sum_probs=62.2
Q ss_pred CEEEEEeCChHHHH-HHHHHhcC-CCEEE-EECCCCcHHHHHHc-CCc-ccCHHHhcc--ccCEEEEeCCCChhcccccc
Q 046427 193 KTLAVMGFGKVGTE-VARRAKGL-GMNVI-AHDPYAQADRARAT-GVG-LVSFEEAIS--TADFISLHMPLTPATSKMFN 265 (595)
Q Consensus 193 ktvGIIGlG~IG~~-vA~~l~~~-G~~V~-~~d~~~~~~~a~~~-g~~-~~~l~ell~--~aD~V~l~~Plt~~t~~li~ 265 (595)
.+|||||+|.||+. .++.++.. +++|. ++|++..... ... ++. +.+++++++ +.|+|++|+|... -..+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~-~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~-H~~~-- 83 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVK-RDLPDVTVIASPEAAVQHPDVDLVVIASPNAT-HAPL-- 83 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH-HHCTTSEEESCHHHHHTCTTCSEEEECSCGGG-HHHH--
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH-hhCCCCcEECCHHHHhcCCCCCEEEEeCChHH-HHHH--
Confidence 37999999999997 77777765 78876 5787653222 233 443 348999998 7999999999432 2211
Q ss_pred HHHHhcCCCceEEEecc--CCchhcHHHHHHHHhcCC
Q 046427 266 DEAFFKMKKGVRIVNVA--RGGVVDEEALVRALDSGI 300 (595)
Q Consensus 266 ~~~l~~mk~gailiN~a--rg~~vd~~aL~~aL~~g~ 300 (595)
....++.|.-++.-- --.+-+.++|.++.++..
T Consensus 84 --~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g 118 (364)
T 3e82_A 84 --ARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQ 118 (364)
T ss_dssp --HHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTT
T ss_pred --HHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhC
Confidence 122344454443322 123334556666655543
No 234
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=96.66 E-value=0.0021 Score=66.32 Aligned_cols=100 Identities=17% Similarity=0.167 Sum_probs=64.9
Q ss_pred EEEEEeCChHHHHHHHHHhcC-CCEEE-EECCCCcHHHHHHcCCcc-cCHHHhccccCEEEEeCCCChhccccccHHHHh
Q 046427 194 TLAVMGFGKVGTEVARRAKGL-GMNVI-AHDPYAQADRARATGVGL-VSFEEAISTADFISLHMPLTPATSKMFNDEAFF 270 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~~~a~~~g~~~-~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~ 270 (595)
+|||||+|+||+.+++.+... +++++ ++|++...... .|+.. .++++++.++|+|++|+|..... .....
T Consensus 5 rV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~~~--~gv~~~~d~~~ll~~~DvViiatp~~~h~-----~~~~~ 77 (320)
T 1f06_A 5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTK--TPVFDVADVDKHADDVDVLFLCMGSATDI-----PEQAP 77 (320)
T ss_dssp EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSS--SCEEEGGGGGGTTTTCSEEEECSCTTTHH-----HHHHH
T ss_pred EEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHhhc--CCCceeCCHHHHhcCCCEEEEcCCcHHHH-----HHHHH
Confidence 799999999999999999866 67755 57876432111 34432 36788888999999999853221 22234
Q ss_pred cCCCceEEEeccCCchh--cH-HHHHHHHhcCC
Q 046427 271 KMKKGVRIVNVARGGVV--DE-EALVRALDSGI 300 (595)
Q Consensus 271 ~mk~gailiN~arg~~v--d~-~aL~~aL~~g~ 300 (595)
.++.|.-++...-..+- +. +.|.++.+++.
T Consensus 78 al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 78 KFAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp HHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 46677766665544332 22 45566555544
No 235
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=96.66 E-value=0.0048 Score=63.68 Aligned_cols=64 Identities=11% Similarity=0.140 Sum_probs=49.3
Q ss_pred CEEEEEeCChHHHHHHHHHhcCC---CEEE-EECCCCc--HHHHHHcCCc--ccCHHHhcc--ccCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLG---MNVI-AHDPYAQ--ADRARATGVG--LVSFEEAIS--TADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G---~~V~-~~d~~~~--~~~a~~~g~~--~~~l~ell~--~aD~V~l~~Pl 256 (595)
.++||||+|.||+..++.++..+ +++. ++|++.. ...+.+.|+. +.+++++++ +.|+|++|+|.
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 76 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQH 76 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCG
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCc
Confidence 37999999999999999998653 5655 4788753 2344566763 458999997 69999999994
No 236
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=96.65 E-value=0.0033 Score=56.96 Aligned_cols=58 Identities=17% Similarity=0.220 Sum_probs=46.0
Q ss_pred cEEEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEEcCCCCcHHHHHHHhc
Q 046427 522 SIILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIGVDEEPSREVLKKIGE 583 (595)
Q Consensus 522 ~~Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~~d~~~~~e~l~~L~~ 583 (595)
+.+.+..+|+||+++++.+.|+++||||.+|...+ .++.+.++++.+ -.+.+.+.|.+
T Consensus 73 svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~--~~~~~~~~i~~~--d~~~A~~~L~~ 130 (144)
T 2f06_A 73 DVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFA--NNNVANVVIRPS--NMDKCIEVLKE 130 (144)
T ss_dssp EEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEE--ETTEEEEEEEES--CHHHHHHHHHH
T ss_pred eEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEc--cCCcEEEEEEeC--CHHHHHHHHHH
Confidence 34556889999999999999999999999988875 446788888886 33566666665
No 237
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.64 E-value=0.0024 Score=66.20 Aligned_cols=64 Identities=16% Similarity=0.193 Sum_probs=49.7
Q ss_pred CEEEEEeCChHHHHHHHHHh-c-CCCEEE-EECCCCcH--HHHHHcC--Cc-ccCHHHhccc--cCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAK-G-LGMNVI-AHDPYAQA--DRARATG--VG-LVSFEEAIST--ADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~-~-~G~~V~-~~d~~~~~--~~a~~~g--~~-~~~l~ell~~--aD~V~l~~Pl 256 (595)
.+|||||+|.||+..++.++ . -++++. ++|++... ..+.+.| .. +.++++++++ .|+|++|+|.
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~ 76 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWG 76 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCG
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCc
Confidence 37999999999999999998 5 478876 57887632 3345567 33 3589999986 9999999994
No 238
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.64 E-value=0.0043 Score=67.12 Aligned_cols=101 Identities=20% Similarity=0.218 Sum_probs=72.9
Q ss_pred eeeecCCEEEEEeCC----------hHHHHHHHHHhcCCCEEEEECCCCcHHHHHHc-CCccc-CHHHhccccCEEEEeC
Q 046427 187 GVSLVGKTLAVMGFG----------KVGTEVARRAKGLGMNVIAHDPYAQADRARAT-GVGLV-SFEEAISTADFISLHM 254 (595)
Q Consensus 187 g~~l~gktvGIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~-g~~~~-~l~ell~~aD~V~l~~ 254 (595)
+..+.|++|+|+|+- .-...+++.|...|.+|.+|||....+..... ++.++ ++++.++.||.|++++
T Consensus 317 ~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t 396 (446)
T 4a7p_A 317 GGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQASKMLTDVEFVENPYAAADGADALVIVT 396 (446)
T ss_dssp TSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHHGGGCSSCCBCSCHHHHHTTBSEEEECS
T ss_pred cccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhHHHhcCCceEecChhHHhcCCCEEEEee
Confidence 456899999999997 56788999999999999999998743322222 55554 7889999999999999
Q ss_pred CCChhccccccHHHH-hcCCCceEEEeccCCchhcHHHH
Q 046427 255 PLTPATSKMFNDEAF-FKMKKGVRIVNVARGGVVDEEAL 292 (595)
Q Consensus 255 Plt~~t~~li~~~~l-~~mk~gailiN~arg~~vd~~aL 292 (595)
. .++-+. ++-+.+ +.|+ +.+|+|+ |+- .+.+.+
T Consensus 397 ~-~~~f~~-~d~~~~~~~~~-~~~i~D~-r~~-~~~~~~ 430 (446)
T 4a7p_A 397 E-WDAFRA-LDLTRIKNSLK-SPVLVDL-RNI-YPPAEL 430 (446)
T ss_dssp C-CTTTTS-CCHHHHHTTBS-SCBEECS-SCC-SCHHHH
T ss_pred C-CHHhhc-CCHHHHHHhcC-CCEEEEC-CCC-CCHHHH
Confidence 7 344433 344444 4465 4678885 643 465544
No 239
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.63 E-value=0.0015 Score=65.06 Aligned_cols=105 Identities=14% Similarity=0.178 Sum_probs=67.8
Q ss_pred HHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-------------------cHH-H
Q 046427 171 ADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-------------------QAD-R 229 (595)
Q Consensus 171 ~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-------------------~~~-~ 229 (595)
+.++++-.+|.... -..|.+++|.|||+|.+|+.+|+.|...|. ++..+|+.. ... .
T Consensus 12 y~Rq~~l~~~g~~~--q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~ 89 (249)
T 1jw9_B 12 YNRQIILRGFDFDG--QEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVES 89 (249)
T ss_dssp THHHHTSTTTHHHH--HHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHH
T ss_pred hhheecccccCHHH--HHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHH
Confidence 44555545564321 125889999999999999999999999997 899998764 211 1
Q ss_pred H----HHc--CCc--c----c---CHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEec
Q 046427 230 A----RAT--GVG--L----V---SFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNV 281 (595)
Q Consensus 230 a----~~~--g~~--~----~---~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~ 281 (595)
+ .+. ++. . . +++++++++|+|+.+++ +.+++.++++..... +..+|+.
T Consensus 90 ~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~---~~p~i~~ 152 (249)
T 1jw9_B 90 ARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFAA---KVPLVSG 152 (249)
T ss_dssp HHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHHH---TCCEEEE
T ss_pred HHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHHc---CCCEEEe
Confidence 1 111 121 1 1 24567788898888886 566777776654442 3345554
No 240
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.59 E-value=0.0042 Score=60.97 Aligned_cols=91 Identities=20% Similarity=0.197 Sum_probs=62.5
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHH---HHHcCCccc--C-HHHhccccCEEEEeCCCChhc
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADR---ARATGVGLV--S-FEEAISTADFISLHMPLTPAT 260 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~---a~~~g~~~~--~-l~ell~~aD~V~l~~Plt~~t 260 (595)
..++.|+++.|||.|.+|...++.|...|.+|+++++....+. +.+.++++. + -++.+..+|+|+.++...+ .
T Consensus 26 fl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~~-~ 104 (223)
T 3dfz_A 26 MLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQA-V 104 (223)
T ss_dssp EECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCTH-H
T ss_pred EEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCHH-H
Confidence 3579999999999999999999999999999999998765332 222234332 1 2456788999988765332 2
Q ss_pred cccccHHHHhcCCCceEEEeccC
Q 046427 261 SKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 261 ~~li~~~~l~~mk~gailiN~ar 283 (595)
|.......+ -.++||++.
T Consensus 105 ----N~~I~~~ak-~gi~VNvvD 122 (223)
T 3dfz_A 105 ----NKFVKQHIK-NDQLVNMAS 122 (223)
T ss_dssp ----HHHHHHHSC-TTCEEEC--
T ss_pred ----HHHHHHHHh-CCCEEEEeC
Confidence 333333345 457788743
No 241
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.57 E-value=0.0037 Score=67.22 Aligned_cols=64 Identities=19% Similarity=0.229 Sum_probs=49.0
Q ss_pred CEEEEEeCChHHH-HHHHHHhcC-CCEEE-EECCCCcH--HHHHHcCCc------ccCHHHhcc--ccCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGT-EVARRAKGL-GMNVI-AHDPYAQA--DRARATGVG------LVSFEEAIS--TADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~-~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~~------~~~l~ell~--~aD~V~l~~Pl 256 (595)
.+|||||+|.||+ .+++.++.. +++++ ++|++... ..+.+.|+. +.+++++++ +.|+|++|+|.
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~ 160 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPN 160 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCG
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCc
Confidence 4799999999997 899988865 57764 67887532 234455664 348999997 79999999994
No 242
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.54 E-value=0.0073 Score=63.00 Aligned_cols=104 Identities=16% Similarity=0.193 Sum_probs=66.1
Q ss_pred CEEEEEeCChHHHHHHHHHhcC-CCEEE-EECCCCcH--HHHHHcCC----c-ccCHHHhcc--ccCEEEEeCCCChhcc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL-GMNVI-AHDPYAQA--DRARATGV----G-LVSFEEAIS--TADFISLHMPLTPATS 261 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~----~-~~~l~ell~--~aD~V~l~~Plt~~t~ 261 (595)
.+|||||+|.||+.+++.++.. +++++ ++|++... ..+.+.|+ . +.+++++++ ++|+|++|+|... ..
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~-h~ 85 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSL-HV 85 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGG-HH
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHH-HH
Confidence 3799999999999999988865 67765 57876532 33445563 2 348999996 5999999999432 22
Q ss_pred ccccHHHHhcCCCce-EEEec-cCCchhcHHHHHHHHhcCCe
Q 046427 262 KMFNDEAFFKMKKGV-RIVNV-ARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 262 ~li~~~~l~~mk~ga-iliN~-arg~~vd~~aL~~aL~~g~i 301 (595)
.+ ....++.|. +++.- ---.+-+.++|.++.++..+
T Consensus 86 ~~----~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~ 123 (362)
T 1ydw_A 86 EW----AIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGV 123 (362)
T ss_dssp HH----HHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTC
T ss_pred HH----HHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCC
Confidence 11 223356665 44432 11223345677777766543
No 243
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.53 E-value=0.0026 Score=62.10 Aligned_cols=86 Identities=14% Similarity=0.232 Sum_probs=57.8
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHHcCCccc-----C---HHHh-ccccCEEEEeCCCChhcc
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARATGVGLV-----S---FEEA-ISTADFISLHMPLTPATS 261 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~-----~---l~el-l~~aD~V~l~~Plt~~t~ 261 (595)
.+++.|+|+|.+|+.+|+.|...|. |+++|++... +.+. .|+..+ + |+++ +.+||.|++++|... .
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~--~ 84 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS--E 84 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHH--H
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcH--H
Confidence 4579999999999999999999999 9999987643 2233 554321 2 3344 789999999998543 2
Q ss_pred ccccHHHHhcCCCc-eEEEec
Q 046427 262 KMFNDEAFFKMKKG-VRIVNV 281 (595)
Q Consensus 262 ~li~~~~l~~mk~g-ailiN~ 281 (595)
++.-......+.++ .+++.+
T Consensus 85 n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 85 TIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp HHHHHHHHHHHCSSSEEEEEC
T ss_pred HHHHHHHHHHHCCCCeEEEEE
Confidence 23333344556666 344443
No 244
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=96.53 E-value=0.0043 Score=65.89 Aligned_cols=89 Identities=16% Similarity=0.235 Sum_probs=62.7
Q ss_pred EEEEEeCChHHHHHHHHHhcCC--------CEEEEECCCCc---H---HHHHHc--------CCc------c-cCHHHhc
Q 046427 194 TLAVMGFGKVGTEVARRAKGLG--------MNVIAHDPYAQ---A---DRARAT--------GVG------L-VSFEEAI 244 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~G--------~~V~~~d~~~~---~---~~a~~~--------g~~------~-~~l~ell 244 (595)
+|+|||.|.-|.++|..+..-| .+|..|.+... . +..... |+. . .++++.+
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 7999999999999999987533 46888865432 1 111110 121 1 2789999
Q ss_pred cccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCC
Q 046427 245 STADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARG 284 (595)
Q Consensus 245 ~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg 284 (595)
++||+|++++| +...+.++. +....++++..+|+++.|
T Consensus 116 ~~ad~ii~avP-s~~~r~~l~-~l~~~~~~~~~iv~~~KG 153 (391)
T 4fgw_A 116 KDVDIIVFNIP-HQFLPRICS-QLKGHVDSHVRAISCLKG 153 (391)
T ss_dssp TTCSEEEECSC-GGGHHHHHH-HHTTTSCTTCEEEECCCS
T ss_pred hcCCEEEEECC-hhhhHHHHH-HhccccCCCceeEEeccc
Confidence 99999999999 444555543 334467899999999987
No 245
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.51 E-value=0.011 Score=60.63 Aligned_cols=92 Identities=24% Similarity=0.274 Sum_probs=67.6
Q ss_pred eecCCEEEEEeCC---hHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCcccCHHHhccccCEEEEeCCCChh-----
Q 046427 189 SLVGKTLAVMGFG---KVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLVSFEEAISTADFISLHMPLTPA----- 259 (595)
Q Consensus 189 ~l~gktvGIIGlG---~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~----- 259 (595)
.+.|.+|++||=| ++..+++..+..||++|....|.. ..+ ....| ...++++++++||+|..-.--.+.
T Consensus 144 ~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~-~~~~g-~~~d~~eav~~aDvvyt~~~q~er~~~~~ 221 (304)
T 3r7f_A 144 TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDE-ENTFG-TYVSMDEAVESSDVVMLLRIQNERHQSAV 221 (304)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCT-TCSSC-EECCHHHHHHHCSEEEECCCCTTTCCSSC
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcc-hhhcC-ccCCHHHHhCCCCEEEeccchhhccccch
Confidence 3789999999975 799999999999999999988743 111 11223 345899999999999884311110
Q ss_pred ------ccccccHHHHhcCCCceEEEecc
Q 046427 260 ------TSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 260 ------t~~li~~~~l~~mk~gailiN~a 282 (595)
....++.+.++.+|++++|.-|.
T Consensus 222 ~~~~~~~~y~v~~~~l~~a~~~ai~mHcl 250 (304)
T 3r7f_A 222 SQEGYLNKYGLTVERAERMKRHAIIMHPA 250 (304)
T ss_dssp CSTTHHHHHSBCHHHHTTSCTTCEEECCS
T ss_pred hHHHHhCCCccCHHHHhhcCCCCEEECCC
Confidence 12346788888889999988886
No 246
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.50 E-value=0.0053 Score=62.81 Aligned_cols=93 Identities=17% Similarity=0.204 Sum_probs=59.5
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCC--EEEEECCCCcH-H-HHH--HcCC------c--ccCHHHhccccCEEEEeCCCC
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGM--NVIAHDPYAQA-D-RAR--ATGV------G--LVSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~-~-~a~--~~g~------~--~~~l~ell~~aD~V~l~~Plt 257 (595)
-++|+|||.|.||..+|..+...|. +|..+|+.... + .+. ..+. . ..+-.+.+++||+|+++++..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v~~~ 86 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPR 86 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECCCCC
Confidence 4689999999999999999998888 99999987522 1 111 2222 1 111235678999999999632
Q ss_pred hhccc------------ccc--HHHHhcCCCceEEEeccCCc
Q 046427 258 PATSK------------MFN--DEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 258 ~~t~~------------li~--~~~l~~mk~gailiN~arg~ 285 (595)
. ..+ ++. ...+....+++++++++-|-
T Consensus 87 ~-~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 87 Q-KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPV 127 (319)
T ss_dssp C-CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred C-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCch
Confidence 2 211 000 11222236788998886543
No 247
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=96.49 E-value=0.021 Score=58.99 Aligned_cols=126 Identities=22% Similarity=0.259 Sum_probs=85.2
Q ss_pred HhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCC--hHHHHHHHHHhc
Q 046427 136 TEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFG--KVGTEVARRAKG 213 (595)
Q Consensus 136 ~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~l~~ 213 (595)
+-.+|+|.|.-+....++ .+++=++.+.++ .| .+.|.+|++||=| ++..+++..+..
T Consensus 132 ~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~------------------~g-~l~gl~va~vGD~~~rva~Sl~~~~~~ 190 (325)
T 1vlv_A 132 EYSGVPVYNGLTDEFHPT--QALADLMTIEEN------------------FG-RLKGVKVVFMGDTRNNVATSLMIACAK 190 (325)
T ss_dssp HHHCSCEEESCCSSCCHH--HHHHHHHHHHHH------------------HS-CSTTCEEEEESCTTSHHHHHHHHHHHH
T ss_pred HhCCCCEEeCCCCCCCcH--HHHHHHHHHHHH------------------hC-CcCCcEEEEECCCCcCcHHHHHHHHHH
Confidence 344789999765443333 233333333331 12 4789999999996 999999999999
Q ss_pred CCCEEEEECCCC---cHHH-------HHHcCCc---ccCHHHhccccCEEEEeCCC-------Chh-----ccccccHHH
Q 046427 214 LGMNVIAHDPYA---QADR-------ARATGVG---LVSFEEAISTADFISLHMPL-------TPA-----TSKMFNDEA 268 (595)
Q Consensus 214 ~G~~V~~~d~~~---~~~~-------a~~~g~~---~~~l~ell~~aD~V~l~~Pl-------t~~-----t~~li~~~~ 268 (595)
||++|....|.. +.+. +++.|.. ..++++++++||+|..-.=. .++ ....++.+.
T Consensus 191 ~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~w~smg~~~~~~~~~~~~~~y~v~~el 270 (325)
T 1vlv_A 191 MGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERMALLKPYQVNERV 270 (325)
T ss_dssp TTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC----------CHHHHGGGCBCHHH
T ss_pred CCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEeccccccccccchHhHHHHHhhcCCCHHH
Confidence 999999988743 2211 1255643 34899999999999883321 011 135568888
Q ss_pred HhcC-CCceEEEecc
Q 046427 269 FFKM-KKGVRIVNVA 282 (595)
Q Consensus 269 l~~m-k~gailiN~a 282 (595)
++.+ |++++|.-|.
T Consensus 271 l~~a~k~dai~mH~L 285 (325)
T 1vlv_A 271 MEMTGKSETIFMHCL 285 (325)
T ss_dssp HHTTCCTTCEEEECS
T ss_pred HHhccCCCeEEECCC
Confidence 8888 8899998887
No 248
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=96.49 E-value=0.025 Score=58.25 Aligned_cols=127 Identities=17% Similarity=0.167 Sum_probs=85.9
Q ss_pred HHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeC-ChHHHHHHHHHhc
Q 046427 135 ATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGF-GKVGTEVARRAKG 213 (595)
Q Consensus 135 a~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGl-G~IG~~vA~~l~~ 213 (595)
|.-.+|+|.|.-+....++ .+++=++.+.++. | .+.|.+|++||= +++..+++..+..
T Consensus 119 A~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~------------------g-~l~gl~va~vGD~~rva~Sl~~~~~~ 177 (315)
T 1pvv_A 119 AKYATVPVINGLSDFSHPC--QALADYMTIWEKK------------------G-TIKGVKVVYVGDGNNVAHSLMIAGTK 177 (315)
T ss_dssp HHHCSSCEEEEECSSCCHH--HHHHHHHHHHHHH------------------S-CCTTCEEEEESCCCHHHHHHHHHHHH
T ss_pred HHhCCCCEEcCCCCCCCcH--HHHHHHHHHHHHh------------------C-CcCCcEEEEECCCcchHHHHHHHHHH
Confidence 3445688999655433333 2333333333311 2 478999999997 8999999999999
Q ss_pred CCCEEEEECCCC---cHHH-------HHHcCCc---ccCHHHhccccCEEEEeCCC-------Chh-----ccccccHHH
Q 046427 214 LGMNVIAHDPYA---QADR-------ARATGVG---LVSFEEAISTADFISLHMPL-------TPA-----TSKMFNDEA 268 (595)
Q Consensus 214 ~G~~V~~~d~~~---~~~~-------a~~~g~~---~~~l~ell~~aD~V~l~~Pl-------t~~-----t~~li~~~~ 268 (595)
+|++|....|.. +.+. +++.|.. ..++++.+++||+|..-.=. .++ ....++.+.
T Consensus 178 ~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~el 257 (315)
T 1pvv_A 178 LGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEERRKIFRPFQVNKDL 257 (315)
T ss_dssp TTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCCCSSTTSSSSHHHHHHGGGCBCHHH
T ss_pred CCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcceeccCcccchHHHHHHHHhcCCCHHH
Confidence 999999988743 2211 1255643 34899999999999984321 111 135568888
Q ss_pred HhcCCCceEEEecc
Q 046427 269 FFKMKKGVRIVNVA 282 (595)
Q Consensus 269 l~~mk~gailiN~a 282 (595)
++.+|++++|.-|.
T Consensus 258 l~~a~~~ai~mH~l 271 (315)
T 1pvv_A 258 VKHAKPDYMFMHCL 271 (315)
T ss_dssp HHTSCTTCEEEECS
T ss_pred HhhcCCCcEEECCC
Confidence 88889999998887
No 249
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.49 E-value=0.0067 Score=65.65 Aligned_cols=95 Identities=16% Similarity=0.157 Sum_probs=68.7
Q ss_pred eeeecCCEEEEEeCCh----------HHHHHHHHHhcCCCEEEEECCCCcHHHHHHcC--Cccc-CHHHhccccCEEEEe
Q 046427 187 GVSLVGKTLAVMGFGK----------VGTEVARRAKGLGMNVIAHDPYAQADRARATG--VGLV-SFEEAISTADFISLH 253 (595)
Q Consensus 187 g~~l~gktvGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g--~~~~-~l~ell~~aD~V~l~ 253 (595)
+..+.|++|+|+|+-- =...+++.|...|.+|.+|||....+.....+ +.++ ++++.++.||.|+++
T Consensus 313 ~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~ 392 (450)
T 3gg2_A 313 KGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHV 392 (450)
T ss_dssp TTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGSEECSSHHHHTTTCSCEEEC
T ss_pred cccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHHHHHhcCccceecCCHHHHhcCCCEEEEc
Confidence 4468999999999852 46789999999999999999988543222333 4444 688999999999999
Q ss_pred CCCChhccccccHHHH-hcCCCceEEEeccCCc
Q 046427 254 MPLTPATSKMFNDEAF-FKMKKGVRIVNVARGG 285 (595)
Q Consensus 254 ~Plt~~t~~li~~~~l-~~mk~gailiN~arg~ 285 (595)
++ .++-+.+ +-+.+ +.|+ +.+|+|+ |+-
T Consensus 393 t~-~~~f~~~-~~~~~~~~~~-~~~i~D~-r~~ 421 (450)
T 3gg2_A 393 TE-WKEFRMP-DWSALSQAMA-ASLVIDG-RNV 421 (450)
T ss_dssp SC-CGGGSSC-CHHHHHHHSS-SCEEEES-SCC
T ss_pred cC-CHHHhhc-CHHHHHHhcC-CCEEEEC-CCC
Confidence 97 4444443 44444 4465 5688985 543
No 250
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.48 E-value=0.012 Score=63.20 Aligned_cols=108 Identities=18% Similarity=0.213 Sum_probs=70.3
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEE--------ECCCC-cHHH------------------HHHcCCcccC
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIA--------HDPYA-QADR------------------ARATGVGLVS 239 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~--------~d~~~-~~~~------------------a~~~g~~~~~ 239 (595)
+.++.|||+.|=|+|++|+..|+.|...|.+|++ ||+.- +.+. +.+.|...++
T Consensus 230 ~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~ 309 (450)
T 4fcc_A 230 GMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLE 309 (450)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEE
T ss_pred CCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEec
Confidence 3469999999999999999999999999999986 44432 2111 1122333333
Q ss_pred HHHhc-cccCEEEEeCCCChhccccccHHHHhcCCCc--eEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 240 FEEAI-STADFISLHMPLTPATSKMFNDEAFFKMKKG--VRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 240 l~ell-~~aD~V~l~~Plt~~t~~li~~~~l~~mk~g--ailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
-++++ -.||+.+-|. +.+.|+.+....++.+ .++++.+-+.+ ..++ .+.|.+..|
T Consensus 310 ~~~i~~~~~DI~iPcA-----l~~~I~~~~a~~L~a~g~k~IaEgAN~p~-t~eA-~~iL~~rGI 367 (450)
T 4fcc_A 310 GQQPWSVPVDIALPCA-----TQNELDVDAAHQLIANGVKAVAEGANMPT-TIEA-TELFQQAGV 367 (450)
T ss_dssp TCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCB-CHHH-HHHHHHTTC
T ss_pred CcccccCCccEEeecc-----ccccccHHHHHHHHhcCceEEecCCCCCC-CHHH-HHHHHHCCC
Confidence 33443 3688887775 4566887777777643 47777777665 3333 344555444
No 251
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.42 E-value=0.0026 Score=67.08 Aligned_cols=65 Identities=23% Similarity=0.410 Sum_probs=47.4
Q ss_pred eeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcC----CcccC---HHHhccccCEEEE
Q 046427 188 VSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATG----VGLVS---FEEAISTADFISL 252 (595)
Q Consensus 188 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g----~~~~~---l~ell~~aD~V~l 252 (595)
.-+.||||+|+|.|.+|+.+++.++.+|++|+++|++.......-.. ..+.+ +.++++++|+|+.
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTY 81 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeee
Confidence 34789999999999999999999999999999999865211100000 01222 6678888998854
No 252
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.42 E-value=0.01 Score=61.25 Aligned_cols=102 Identities=14% Similarity=0.152 Sum_probs=63.9
Q ss_pred CEEEEEeCChHHH-HHHHHHhcCCCEEE-EECCCCc--HHHHHHc-CCc-ccCHHHhcc--ccCEEEEeCCCChhccccc
Q 046427 193 KTLAVMGFGKVGT-EVARRAKGLGMNVI-AHDPYAQ--ADRARAT-GVG-LVSFEEAIS--TADFISLHMPLTPATSKMF 264 (595)
Q Consensus 193 ktvGIIGlG~IG~-~vA~~l~~~G~~V~-~~d~~~~--~~~a~~~-g~~-~~~l~ell~--~aD~V~l~~Plt~~t~~li 264 (595)
.+|||||+|.+|. .+++.++..++++. ++|++.. ...+.+. ++. +.+++++++ +.|+|++|+|.... .
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h-~--- 80 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDR-A--- 80 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGH-H---
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhH-H---
Confidence 4799999999996 67777776788865 6788763 3344555 343 348999997 69999999994321 1
Q ss_pred cHHHHhcCCCce-EEEec-cCCchhcHHHHHHHHhcC
Q 046427 265 NDEAFFKMKKGV-RIVNV-ARGGVVDEEALVRALDSG 299 (595)
Q Consensus 265 ~~~~l~~mk~ga-iliN~-arg~~vd~~aL~~aL~~g 299 (595)
+-....|+.|. +++.- .--.+-+.++|.++.++.
T Consensus 81 -~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~ 116 (336)
T 2p2s_A 81 -ELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAET 116 (336)
T ss_dssp -HHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 11223345554 55542 122333455666665543
No 253
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=96.34 E-value=0.029 Score=58.16 Aligned_cols=129 Identities=19% Similarity=0.179 Sum_probs=87.0
Q ss_pred HHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCC--hHHHHHHHHHh
Q 046427 135 ATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFG--KVGTEVARRAK 212 (595)
Q Consensus 135 a~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~l~ 212 (595)
|.-.+|+|.|.-+....++ .+++=++.+.++ .|..+.|.+|++||=| ++..+++..+.
T Consensus 118 A~~s~vPVINa~~~~~HPt--Q~LaDl~Ti~e~------------------~g~~l~gl~va~vGD~~~~va~Sl~~~~~ 177 (335)
T 1dxh_A 118 AKFAGVPVFNGLTDEYHPT--QMLADVLTMREH------------------SDKPLHDISYAYLGDARNNMGNSLLLIGA 177 (335)
T ss_dssp HHHSSSCEEEEECSSCCHH--HHHHHHHHHHHT------------------CSSCGGGCEEEEESCCSSHHHHHHHHHHH
T ss_pred HHhCCCCEEcCCCCCCCcH--HHHHHHHHHHHH------------------cCCCcCCeEEEEecCCccchHHHHHHHHH
Confidence 3445789999765433333 233333333331 1224889999999996 99999999999
Q ss_pred cCCCEEEEECCCC---cHHH-------HHHcCCc---ccCHHHhccccCEEEEeCCC--------Chh-----ccccccH
Q 046427 213 GLGMNVIAHDPYA---QADR-------ARATGVG---LVSFEEAISTADFISLHMPL--------TPA-----TSKMFND 266 (595)
Q Consensus 213 ~~G~~V~~~d~~~---~~~~-------a~~~g~~---~~~l~ell~~aD~V~l~~Pl--------t~~-----t~~li~~ 266 (595)
.+|++|....|.. +.+. +++.|.. ..++++.+++||+|..-.=. ..+ ...-++.
T Consensus 178 ~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~e~~~er~~~~~~y~v~~ 257 (335)
T 1dxh_A 178 KLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNM 257 (335)
T ss_dssp HTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCSCSSSCGGGCHHHHHHHGGGCBCH
T ss_pred HcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeCCccccCccchhhHHHHHHhhcceeCH
Confidence 9999999988743 2211 1255643 34899999999999883320 010 1245788
Q ss_pred HHHhcC-CCceEEEeccC
Q 046427 267 EAFFKM-KKGVRIVNVAR 283 (595)
Q Consensus 267 ~~l~~m-k~gailiN~ar 283 (595)
+.++.+ ||+++|.-|.-
T Consensus 258 ~ll~~a~~~~ai~mHcLP 275 (335)
T 1dxh_A 258 EIMKATGNPRAKFMHCLP 275 (335)
T ss_dssp HHHHTTCCSSCEEEECSC
T ss_pred HHHHhccCCCeEEECCCC
Confidence 888888 99999998863
No 254
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.33 E-value=0.0097 Score=59.12 Aligned_cols=80 Identities=16% Similarity=0.166 Sum_probs=54.8
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEE-ECCCCcHHHHHHcCCccc-CHHHhccccCEEEEeCCCChhccccccHHHHh
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIA-HDPYAQADRARATGVGLV-SFEEAISTADFISLHMPLTPATSKMFNDEAFF 270 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~-~d~~~~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~ 270 (595)
.+|+|+|+|+||+.+++.+...+.++.+ +|+.... ..|+... ++++++ ++|+|+-+++ ...+.. .+.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~----~~gv~v~~dl~~l~-~~DVvIDft~-p~a~~~-----~~~ 72 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA----TTPYQQYQHIADVK-GADVAIDFSN-PNLLFP-----LLD 72 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC------CCSCBCSCTTTCT-TCSEEEECSC-HHHHHH-----HHT
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc----cCCCceeCCHHHHh-CCCEEEEeCC-hHHHHH-----HHH
Confidence 4799999999999999999866557665 7876542 3566543 788888 9999884442 122222 233
Q ss_pred cCCCceEEEeccCC
Q 046427 271 KMKKGVRIVNVARG 284 (595)
Q Consensus 271 ~mk~gailiN~arg 284 (595)
++.|.-+|....|
T Consensus 73 -l~~g~~vVigTTG 85 (243)
T 3qy9_A 73 -EDFHLPLVVATTG 85 (243)
T ss_dssp -SCCCCCEEECCCS
T ss_pred -HhcCCceEeCCCC
Confidence 6777777765555
No 255
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.28 E-value=0.0059 Score=63.92 Aligned_cols=88 Identities=20% Similarity=0.232 Sum_probs=64.7
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHH-HcCCccc----C---HHHhccccCEEEEeCCCChhcc
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRAR-ATGVGLV----S---FEEAISTADFISLHMPLTPATS 261 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~-~~g~~~~----~---l~ell~~aD~V~l~~Plt~~t~ 261 (595)
.|++|.|+|.|.||...++.++.+|++|++.++... .+.+. ++|...+ + +.++....|+|+-++.....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~-- 264 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP-- 264 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--
Confidence 688999999999999999999999999999987653 34444 6776421 2 33444568999888874321
Q ss_pred ccccHHHHhcCCCceEEEeccC
Q 046427 262 KMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 262 ~li~~~~l~~mk~gailiN~ar 283 (595)
-...+..|+++..+++++.
T Consensus 265 ---~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 265 ---LLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp ---SHHHHHHEEEEEEEEECCC
T ss_pred ---HHHHHHHHhcCCEEEEEcc
Confidence 1345667888888888874
No 256
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=96.27 E-value=0.013 Score=60.07 Aligned_cols=94 Identities=17% Similarity=0.228 Sum_probs=69.0
Q ss_pred eecCCEEEEEeC---ChHHHHHHHHHhcCCCEEEEECCCC---cH---HHHHHcCCcc---cCHHHhccccCEEEEeCCC
Q 046427 189 SLVGKTLAVMGF---GKVGTEVARRAKGLGMNVIAHDPYA---QA---DRARATGVGL---VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 189 ~l~gktvGIIGl---G~IG~~vA~~l~~~G~~V~~~d~~~---~~---~~a~~~g~~~---~~l~ell~~aD~V~l~~Pl 256 (595)
.+.|.+|++||= |++..+++..+..+|++|....|.. +. +.+++.|... .++++++++||+|..-.=-
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q 231 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQ 231 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCC
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCcc
Confidence 478999999998 4899999999999999999988743 22 2233446542 4899999999999885421
Q ss_pred C------hhc-----cccccHHHHhcCCCceEEEecc
Q 046427 257 T------PAT-----SKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 257 t------~~t-----~~li~~~~l~~mk~gailiN~a 282 (595)
. ++- ...++.+.++.+|++++|.-|.
T Consensus 232 ~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 268 (308)
T 1ml4_A 232 KERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPL 268 (308)
T ss_dssp GGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCS
T ss_pred ccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCC
Confidence 1 111 2446777778888888888876
No 257
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.23 E-value=0.006 Score=63.70 Aligned_cols=64 Identities=19% Similarity=0.268 Sum_probs=47.0
Q ss_pred CEEEEEeCChHHHHHHHHHhcC--------CCEEEE-ECCCCc--HHHHHHcCCc--ccCHHHhcc--ccCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL--------GMNVIA-HDPYAQ--ADRARATGVG--LVSFEEAIS--TADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~--------G~~V~~-~d~~~~--~~~a~~~g~~--~~~l~ell~--~aD~V~l~~Pl 256 (595)
-+|||||+|.||+.-++.++.. +++|.+ +|++.. ...+++.|+. +.+++++++ +.|+|++|+|.
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP~ 104 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTPN 104 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSCG
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCCh
Confidence 3799999999999877766543 567665 687763 3456677874 458999996 47999999994
No 258
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.22 E-value=0.0045 Score=64.77 Aligned_cols=63 Identities=14% Similarity=0.226 Sum_probs=46.9
Q ss_pred CEEEEEeCChHHHH-HHHHHhcC-CCEEE-EECCCCcH--HHHHHcC-Cc-ccCHHHhcccc--CEEEEeCC
Q 046427 193 KTLAVMGFGKVGTE-VARRAKGL-GMNVI-AHDPYAQA--DRARATG-VG-LVSFEEAISTA--DFISLHMP 255 (595)
Q Consensus 193 ktvGIIGlG~IG~~-vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g-~~-~~~l~ell~~a--D~V~l~~P 255 (595)
.+|||||+|.||+. +++.++.. +.++. ++|++... ..+.+.+ .. +.++++++++. |+|++|+|
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGP 77 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCC
Confidence 48999999999995 88888876 78877 67887532 2223332 33 34899999865 99999998
No 259
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.21 E-value=0.0057 Score=63.38 Aligned_cols=63 Identities=19% Similarity=0.281 Sum_probs=48.1
Q ss_pred EEEEEeCChHHHH-HHHHHhcC-CCEEEE-ECCCCc--HHHHHHcCCc--ccCHHHhcc--ccCEEEEeCCC
Q 046427 194 TLAVMGFGKVGTE-VARRAKGL-GMNVIA-HDPYAQ--ADRARATGVG--LVSFEEAIS--TADFISLHMPL 256 (595)
Q Consensus 194 tvGIIGlG~IG~~-vA~~l~~~-G~~V~~-~d~~~~--~~~a~~~g~~--~~~l~ell~--~aD~V~l~~Pl 256 (595)
++||||+|.||+. .+..++.. +++|.+ +|++.. .+.+++.|+. +.+++++++ +.|+|++|+|.
T Consensus 25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~ 96 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPT 96 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCG
T ss_pred EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCC
Confidence 7999999999985 56667654 678775 788763 3455677874 458999995 47999999993
No 260
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=96.21 E-value=0.023 Score=58.97 Aligned_cols=129 Identities=19% Similarity=0.175 Sum_probs=86.9
Q ss_pred HhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCC--hHHHHHHHHHhc
Q 046427 136 TEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFG--KVGTEVARRAKG 213 (595)
Q Consensus 136 ~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~l~~ 213 (595)
.-.+|+|.|.-+....++ .+++=++.+.+++ .|..+.|.+|++||=| ++..+++..+..
T Consensus 118 ~~~~vPVINa~~~~~HPt--Q~LaDl~Ti~e~~-----------------~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~ 178 (333)
T 1duv_G 118 EYASVPVWNGLTNEFHPT--QLLADLLTMQEHL-----------------PGKAFNEMTLVYAGDARNNMGNSMLEAAAL 178 (333)
T ss_dssp HHHSSCEEESCCSSCCHH--HHHHHHHHHHHHS-----------------TTCCGGGCEEEEESCTTSHHHHHHHHHHHH
T ss_pred HhCCCCeEcCCCCCCCch--HHHHHHHHHHHHh-----------------cCCCCCCcEEEEECCCccchHHHHHHHHHH
Confidence 344799999765444333 2333334333320 1224789999999986 999999999999
Q ss_pred CCCEEEEECCCC---cHHH-------HHHcCCc---ccCHHHhccccCEEEEeCCC--C------hh-----ccccccHH
Q 046427 214 LGMNVIAHDPYA---QADR-------ARATGVG---LVSFEEAISTADFISLHMPL--T------PA-----TSKMFNDE 267 (595)
Q Consensus 214 ~G~~V~~~d~~~---~~~~-------a~~~g~~---~~~l~ell~~aD~V~l~~Pl--t------~~-----t~~li~~~ 267 (595)
+|++|....|.. +.+. +++.|.. ..++++.+++||+|..-+=. . .+ ....++.+
T Consensus 179 ~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~~~~~er~~~~~~y~v~~~ 258 (333)
T 1duv_G 179 TGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSK 258 (333)
T ss_dssp HCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBCHH
T ss_pred cCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeCCccccCccccchHHHHHHhhccccCHH
Confidence 999999988743 2211 2255643 34899999999999883320 0 00 12467888
Q ss_pred HHhcC-CCceEEEeccC
Q 046427 268 AFFKM-KKGVRIVNVAR 283 (595)
Q Consensus 268 ~l~~m-k~gailiN~ar 283 (595)
.++.+ |++++|.-|.-
T Consensus 259 ll~~a~~~~ai~mHcLP 275 (333)
T 1duv_G 259 MMQLTGNPEVKFLHCLP 275 (333)
T ss_dssp HHHTTCCTTCEEEECSC
T ss_pred HHHhccCCCcEEECCCC
Confidence 88888 99999998863
No 261
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=96.20 E-value=0.026 Score=58.02 Aligned_cols=94 Identities=15% Similarity=0.232 Sum_probs=68.6
Q ss_pred eecCCEEEEEeC---ChHHHHHHHHHhcC-CCEEEEECCCC---cH---HHHHHcCCcc---cCHHHhccccCEEEEeCC
Q 046427 189 SLVGKTLAVMGF---GKVGTEVARRAKGL-GMNVIAHDPYA---QA---DRARATGVGL---VSFEEAISTADFISLHMP 255 (595)
Q Consensus 189 ~l~gktvGIIGl---G~IG~~vA~~l~~~-G~~V~~~d~~~---~~---~~a~~~g~~~---~~l~ell~~aD~V~l~~P 255 (595)
.+.|++|++||= |++..+++..+..+ |++|....|.. +. +.+++.|... .++++++++||+|..-.=
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~ 230 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRV 230 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCc
Confidence 378999999998 59999999999999 99999988743 22 2233446542 479999999999988543
Q ss_pred CCh----hc------cccccHHHHhcCCCceEEEecc
Q 046427 256 LTP----AT------SKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 256 lt~----~t------~~li~~~~l~~mk~gailiN~a 282 (595)
-.+ +. ...++.+.++.+|++++|.-|.
T Consensus 231 q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 267 (310)
T 3csu_A 231 QKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPL 267 (310)
T ss_dssp ----------------CCBCGGGGTTCCTTCEEECCS
T ss_pred cccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCC
Confidence 111 00 2456777888888888888886
No 262
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=96.19 E-value=0.0083 Score=61.05 Aligned_cols=104 Identities=19% Similarity=0.266 Sum_probs=66.9
Q ss_pred CCEEEEEeC-ChHHHHHHHHHhcCCCEEE-EECCCCcHHHHHHcCCcc-cCHHHhcc--ccCEEEEeCCCChhccccccH
Q 046427 192 GKTLAVMGF-GKVGTEVARRAKGLGMNVI-AHDPYAQADRARATGVGL-VSFEEAIS--TADFISLHMPLTPATSKMFND 266 (595)
Q Consensus 192 gktvGIIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~a~~~g~~~-~~l~ell~--~aD~V~l~~Plt~~t~~li~~ 266 (595)
..+|+|+|+ |++|+.+++.++..|++++ .+||..... ...|+.. .+++++.+ ..|++++++|. +.....+.+
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~--~~~G~~vy~sl~el~~~~~~D~viI~tP~-~~~~~~~~e 83 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGT--THLGLPVFNTVREAVAATGATASVIYVPA-PFCKDSILE 83 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHHCCCEEEECCCG-GGHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccc--eeCCeeccCCHHHHhhcCCCCEEEEecCH-HHHHHHHHH
Confidence 358999999 9999999999998898854 577753211 1346543 47999998 89999999994 434444432
Q ss_pred HHHhcCCCceEEEeccCCc-hhcHHHHHHHHhcCCe
Q 046427 267 EAFFKMKKGVRIVNVARGG-VVDEEALVRALDSGII 301 (595)
Q Consensus 267 ~~l~~mk~gailiN~arg~-~vd~~aL~~aL~~g~i 301 (595)
.++ ..... +|..+.|- .-+.+.|.++.++..+
T Consensus 84 -a~~-~Gi~~-iVi~t~G~~~~~~~~l~~~A~~~gv 116 (288)
T 2nu8_A 84 -AID-AGIKL-IITITEGIPTLDMLTVKVKLDEAGV 116 (288)
T ss_dssp -HHH-TTCSE-EEECCCCCCHHHHHHHHHHHHHHTC
T ss_pred -HHH-CCCCE-EEEECCCCCHHHHHHHHHHHHHcCC
Confidence 222 22222 34444442 2345577777766544
No 263
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.19 E-value=0.013 Score=60.73 Aligned_cols=90 Identities=16% Similarity=0.115 Sum_probs=59.6
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCC--EEEEECCCCcHHHH----HHcC-------Ccc-cCHHHhccccCEEEEeCCCC
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGM--NVIAHDPYAQADRA----RATG-------VGL-VSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a----~~~g-------~~~-~~l~ell~~aD~V~l~~Plt 257 (595)
.++|+|||.|.||.++|..+...|+ +|..+|........ .+.+ +.. .+..+.+++||+|+++.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~- 83 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGA- 83 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEeccc-
Confidence 5689999999999999999987776 99999986532111 1111 111 1235689999999999863
Q ss_pred hhcccc-----c--cH-------HHHhcCCCceEEEecc
Q 046427 258 PATSKM-----F--ND-------EAFFKMKKGVRIVNVA 282 (595)
Q Consensus 258 ~~t~~l-----i--~~-------~~l~~mk~gailiN~a 282 (595)
+...++ + |. +.+....|++++++++
T Consensus 84 p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt 122 (326)
T 3pqe_A 84 NQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT 122 (326)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence 222211 1 11 1234457889999997
No 264
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.18 E-value=0.01 Score=61.17 Aligned_cols=70 Identities=21% Similarity=0.348 Sum_probs=52.0
Q ss_pred eeecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCc-HHHH----HH----cCC--c---ccCH---HHhccccCE
Q 046427 188 VSLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQ-ADRA----RA----TGV--G---LVSF---EEAISTADF 249 (595)
Q Consensus 188 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~-~~~a----~~----~g~--~---~~~l---~ell~~aD~ 249 (595)
.++.||++.|+|.|.+|++++..|...|. +|.+++|... .+.+ .+ .+. . ..++ .+.++++|+
T Consensus 144 ~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~Di 223 (312)
T 3t4e_A 144 FDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADI 223 (312)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred CCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceE
Confidence 45889999999999999999999999998 8999998732 1222 11 122 1 1233 556889999
Q ss_pred EEEeCCCC
Q 046427 250 ISLHMPLT 257 (595)
Q Consensus 250 V~l~~Plt 257 (595)
|+.++|..
T Consensus 224 IINaTp~G 231 (312)
T 3t4e_A 224 LTNGTKVG 231 (312)
T ss_dssp EEECSSTT
T ss_pred EEECCcCC
Confidence 99999863
No 265
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=96.18 E-value=0.033 Score=58.39 Aligned_cols=93 Identities=19% Similarity=0.163 Sum_probs=69.1
Q ss_pred ecCCEEEEEeCC--hHHHHHHHHHhcCCCEEEEECCCC--c---HHH-------HHHcCCc--c-cCHHHhccccCEEEE
Q 046427 190 LVGKTLAVMGFG--KVGTEVARRAKGLGMNVIAHDPYA--Q---ADR-------ARATGVG--L-VSFEEAISTADFISL 252 (595)
Q Consensus 190 l~gktvGIIGlG--~IG~~vA~~l~~~G~~V~~~d~~~--~---~~~-------a~~~g~~--~-~~l~ell~~aD~V~l 252 (595)
+.|++|++||=| ++..+++..+..+|++|....|.. . .+. +.+.|.. . .++++++++||+|..
T Consensus 178 l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVyt 257 (365)
T 4amu_A 178 LKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIYT 257 (365)
T ss_dssp CTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEEE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEEe
Confidence 889999999988 789999999999999999988743 2 111 2344542 2 489999999999987
Q ss_pred eC--CCCh--h---------ccccccHHHHhcCCCceEEEecc
Q 046427 253 HM--PLTP--A---------TSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 253 ~~--Plt~--~---------t~~li~~~~l~~mk~gailiN~a 282 (595)
-+ ...+ + ...-++.+.++.+|++++|.-|.
T Consensus 258 d~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcL 300 (365)
T 4amu_A 258 DVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCL 300 (365)
T ss_dssp CCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECS
T ss_pred cccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 32 1111 1 12447888888889999999887
No 266
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.15 E-value=0.015 Score=63.05 Aligned_cols=94 Identities=18% Similarity=0.156 Sum_probs=68.2
Q ss_pred eecCCEEEEEeCCh----------HHHHHHHHHhcCCCEEEEECCCCcHHHHHH-c-------------CCccc-CHHHh
Q 046427 189 SLVGKTLAVMGFGK----------VGTEVARRAKGLGMNVIAHDPYAQADRARA-T-------------GVGLV-SFEEA 243 (595)
Q Consensus 189 ~l~gktvGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~-~-------------g~~~~-~l~el 243 (595)
.+.|++|+|+|+-- -...+++.|...|.+|.+|||....+.... . ++.+. +..+.
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEA 405 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHH
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHH
Confidence 48999999999974 678899999999999999999875432211 1 23333 67889
Q ss_pred ccccCEEEEeCCCChhccccccHHHH-hcCCCceEEEeccCCc
Q 046427 244 ISTADFISLHMPLTPATSKMFNDEAF-FKMKKGVRIVNVARGG 285 (595)
Q Consensus 244 l~~aD~V~l~~Plt~~t~~li~~~~l-~~mk~gailiN~arg~ 285 (595)
++.||.|++++. .++-+.+ +-+.+ ..|+...+|+|+ |+-
T Consensus 406 ~~~ad~~vi~t~-~~~f~~~-~~~~~~~~~~~~~~i~D~-r~~ 445 (467)
T 2q3e_A 406 CDGAHAVVICTE-WDMFKEL-DYERIHKKMLKPAFIFDG-RRV 445 (467)
T ss_dssp HTTCSEEEECSC-CGGGGGS-CHHHHHHHSCSSCEEEES-SCT
T ss_pred HhCCcEEEEecC-ChhhhcC-CHHHHHHhcCCCCEEEeC-CCc
Confidence 999999999998 4444443 44443 467776668886 543
No 267
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=96.15 E-value=0.0084 Score=64.56 Aligned_cols=94 Identities=22% Similarity=0.213 Sum_probs=70.8
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCC---EEEEEC----CC----CcHH---H-------HHHcCC--cccCHHHh
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGM---NVIAHD----PY----AQAD---R-------ARATGV--GLVSFEEA 243 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~---~V~~~d----~~----~~~~---~-------a~~~g~--~~~~l~el 243 (595)
|..+.++++.|+|.|..|+++++.|...|. +|+.+| +. .... . +...+. ...++.+.
T Consensus 181 g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~ 260 (439)
T 2dvm_A 181 GKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEA 260 (439)
T ss_dssp TCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHH
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHH
Confidence 346788999999999999999999999998 799999 65 2111 1 111111 13468899
Q ss_pred ccccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccC
Q 046427 244 ISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 244 l~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~ar 283 (595)
++++|+|+-++|..+ +++..+.++.|+++.++.+++.
T Consensus 261 l~~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLyn 297 (439)
T 2dvm_A 261 LKDADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLAN 297 (439)
T ss_dssp HTTCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCS
T ss_pred hccCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCC
Confidence 999999999998532 4555667788999999999954
No 268
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.14 E-value=0.033 Score=57.13 Aligned_cols=127 Identities=16% Similarity=0.142 Sum_probs=82.5
Q ss_pred HHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeC-ChHHHHHHHHHhc
Q 046427 135 ATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGF-GKVGTEVARRAKG 213 (595)
Q Consensus 135 a~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGl-G~IG~~vA~~l~~ 213 (595)
|...+|+|.|.-+....++ .+++=++.+.++ .| .+.|++|++||= +++..+.+..+..
T Consensus 118 A~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~------------------~g-~l~glkva~vGD~~~va~Sl~~~~~~ 176 (309)
T 4f2g_A 118 AENSRVPVINGLTNEYHPC--QVLADIFTYYEH------------------RG-PIRGKTVAWVGDANNMLYTWIQAARI 176 (309)
T ss_dssp HHTCSSCEEEEECSSCCHH--HHHHHHHHHHHH------------------HS-CCTTCEEEEESCCCHHHHHHHHHHHH
T ss_pred HHhCCCCEEECCCCccCcH--HHHHHHHHHHHH------------------hC-CCCCCEEEEECCCcchHHHHHHHHHH
Confidence 3446789999865443332 222223333221 12 378999999996 6788999999999
Q ss_pred CCCEEEEECCCC---cHHH-HHHcCC--c-ccCHHHhccccCEEEEeC----CC---Ch-----hccccccHHHHhcCCC
Q 046427 214 LGMNVIAHDPYA---QADR-ARATGV--G-LVSFEEAISTADFISLHM----PL---TP-----ATSKMFNDEAFFKMKK 274 (595)
Q Consensus 214 ~G~~V~~~d~~~---~~~~-a~~~g~--~-~~~l~ell~~aD~V~l~~----Pl---t~-----~t~~li~~~~l~~mk~ 274 (595)
||++|....|.. +.+. +++.|. . ..++++.+++||+|..-+ .. .+ -....++.+.++.+|+
T Consensus 177 ~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~~ 256 (309)
T 4f2g_A 177 LDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGFEAENEARKRAFADWCVDEEMMSHANS 256 (309)
T ss_dssp HTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC------------CCSGGGGCBCHHHHTTSCT
T ss_pred cCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcchhhHHHHHHHhcCceeCHHHHHhcCC
Confidence 999999987742 2211 122333 2 248999999999998743 10 00 0124578888888899
Q ss_pred ceEEEecc
Q 046427 275 GVRIVNVA 282 (595)
Q Consensus 275 gailiN~a 282 (595)
+++|.-|.
T Consensus 257 ~ai~mH~l 264 (309)
T 4f2g_A 257 DALFMHCL 264 (309)
T ss_dssp TCEEEECS
T ss_pred CeEEECCC
Confidence 99998886
No 269
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.12 E-value=0.011 Score=60.84 Aligned_cols=112 Identities=20% Similarity=0.210 Sum_probs=67.4
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCC--EEEEECCCCcH--HHHHHc--CC------cc-cCHHHhccccCEEEEeCCCChh
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGM--NVIAHDPYAQA--DRARAT--GV------GL-VSFEEAISTADFISLHMPLTPA 259 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~--~~a~~~--g~------~~-~~l~ell~~aD~V~l~~Plt~~ 259 (595)
.+|+|||.|.+|.++|..+...|. +|..||..... ..+.++ +. .. .+-.+.+++||+|+++.+. +.
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~-p~ 86 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGA-NR 86 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC---
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCC-CC
Confidence 589999999999999999987777 99999986521 112221 11 11 1235679999999999984 32
Q ss_pred cccc-------cc-------HHHHhcCCCceEEEeccCCchhc--HHHHHHH--HhcCCeeEEE--Ee
Q 046427 260 TSKM-------FN-------DEAFFKMKKGVRIVNVARGGVVD--EEALVRA--LDSGIISQAA--LD 307 (595)
Q Consensus 260 t~~l-------i~-------~~~l~~mk~gailiN~arg~~vd--~~aL~~a--L~~g~i~ga~--lD 307 (595)
..++ .| .+.+....|++++++++ ..+| ...+.+. +...++.|.| ||
T Consensus 87 k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~~~~~~k~s~~p~~rviG~gt~Ld 152 (318)
T 1y6j_A 87 KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS--NPVDIITYMIQKWSGLPVGKVIGSGTVLD 152 (318)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS--SSHHHHHHHHHHHHTCCTTTEEECTTHHH
T ss_pred CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec--CcHHHHHHHHHHHcCCCHHHEeccCCchH
Confidence 2221 01 11233346899999973 3344 3344444 4555777762 56
No 270
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.11 E-value=0.021 Score=59.06 Aligned_cols=112 Identities=15% Similarity=0.169 Sum_probs=68.4
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcHHH--HH--Hc-------CCcc--cCHHHhccccCEEEEeCCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQADR--AR--AT-------GVGL--VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~--a~--~~-------g~~~--~~l~ell~~aD~V~l~~Pl 256 (595)
..++|+|||.|.+|.++|..+...|+ +|..||....... +. +. .... .+-.+.+++||+|+++.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag~ 83 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAGV 83 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCCc
Confidence 35789999999999999999987666 9999998764211 11 11 1221 2235789999999999763
Q ss_pred Chhcccc-----c--cH-------HHHhcCCCceEEEeccCCchhc--HHHHHHH--HhcCCeeEEE
Q 046427 257 TPATSKM-----F--ND-------EAFFKMKKGVRIVNVARGGVVD--EEALVRA--LDSGIISQAA 305 (595)
Q Consensus 257 t~~t~~l-----i--~~-------~~l~~mk~gailiN~arg~~vd--~~aL~~a--L~~g~i~ga~ 305 (595)
. ...++ + |. +.+....|++++++++ ..+| ...+.+. +...++.|.+
T Consensus 84 p-~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~~t~~~~k~sg~p~~rviG~~ 147 (321)
T 3p7m_A 84 P-RKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT--NPLDIMVNMLQKFSGVPDNKIVGMA 147 (321)
T ss_dssp C-CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHHHHHHHHHHCCCGGGEEEEC
T ss_pred C-CCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec--CchHHHHHHHHHhcCCCHHHEEeec
Confidence 2 21111 1 11 1233345889999984 4444 3333333 3334565654
No 271
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.09 E-value=0.01 Score=64.07 Aligned_cols=112 Identities=14% Similarity=0.128 Sum_probs=72.1
Q ss_pred cCCEEEEEeCChH--HHHHHHHHhc----CCCEEEEECCCCcH-HHHHHc---------CCcc-cCHHHhccccCEEEEe
Q 046427 191 VGKTLAVMGFGKV--GTEVARRAKG----LGMNVIAHDPYAQA-DRARAT---------GVGL-VSFEEAISTADFISLH 253 (595)
Q Consensus 191 ~gktvGIIGlG~I--G~~vA~~l~~----~G~~V~~~d~~~~~-~~a~~~---------g~~~-~~l~ell~~aD~V~l~ 253 (595)
+.++|+|||.|.+ |..++..+.. .| +|..||..... +..... .+.. .++++++++||||+++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 4568999999998 5788877653 46 99999987522 211111 1222 3789999999999999
Q ss_pred CCCC-----------hhccccccH------------------------HHHhcCCCceEEEeccCCchhcHHHHHHHHhc
Q 046427 254 MPLT-----------PATSKMFND------------------------EAFFKMKKGVRIVNVARGGVVDEEALVRALDS 298 (595)
Q Consensus 254 ~Plt-----------~~t~~li~~------------------------~~l~~mk~gailiN~arg~~vd~~aL~~aL~~ 298 (595)
++.- |.-.++... +.+....|+++++|.+---=+-..++.+.+..
T Consensus 83 irvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~k~~p~ 162 (450)
T 3fef_A 83 ILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKVFPG 162 (450)
T ss_dssp CCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHCTT
T ss_pred cccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHHCCC
Confidence 9642 223333211 23444568999999976443445566555555
Q ss_pred CCeeE
Q 046427 299 GIISQ 303 (595)
Q Consensus 299 g~i~g 303 (595)
.++.|
T Consensus 163 ~rviG 167 (450)
T 3fef_A 163 IKAIG 167 (450)
T ss_dssp CEEEE
T ss_pred CCEEE
Confidence 56655
No 272
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.09 E-value=0.0099 Score=61.30 Aligned_cols=89 Identities=21% Similarity=0.240 Sum_probs=58.3
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCC--EEEEECCCCcHHH--HHH-------c--CCcc--cCHHHhccccCEEEEeCCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGM--NVIAHDPYAQADR--ARA-------T--GVGL--VSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~~-------~--g~~~--~~l~ell~~aD~V~l~~Plt 257 (595)
++|+|||.|.||+++|..+...|+ +|..+|....... +.+ . .... .+..+.+++||+|+++.+..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 479999999999999999886666 9999998763211 100 1 1222 24678899999999998743
Q ss_pred hhcccc-----c--cH-------HHHhcCCCceEEEecc
Q 046427 258 PATSKM-----F--ND-------EAFFKMKKGVRIVNVA 282 (595)
Q Consensus 258 ~~t~~l-----i--~~-------~~l~~mk~gailiN~a 282 (595)
...++ + |. +.+....|++++++++
T Consensus 81 -~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 118 (314)
T 3nep_X 81 -RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA 118 (314)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred -CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence 22211 1 11 1344456888999986
No 273
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=96.08 E-value=0.05 Score=56.13 Aligned_cols=127 Identities=17% Similarity=0.115 Sum_probs=83.0
Q ss_pred HHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCC-hHHHHHHHHHhc
Q 046427 135 ATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFG-KVGTEVARRAKG 213 (595)
Q Consensus 135 a~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG-~IG~~vA~~l~~ 213 (595)
|...+|+|.|.-+....++ .+++=++.+.++. | .+.|.+|++||=| ++..+++..+..
T Consensus 119 A~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~------------------g-~l~gl~va~vGD~~~va~Sl~~~~~~ 177 (321)
T 1oth_A 119 AKEASIPIINGLSDLYHPI--QILADYLTLQEHY------------------S-SLKGLTLSWIGDGNNILHSIMMSAAK 177 (321)
T ss_dssp HHHCSSCEEESCCSSCCHH--HHHHHHHHHHHHH------------------S-CCTTCEEEEESCSSHHHHHHHTTTGG
T ss_pred HHhCCCCEEcCCCCCCCcH--HHHHHHHHHHHHh------------------C-CcCCcEEEEECCchhhHHHHHHHHHH
Confidence 3445799999766444433 2333334443321 2 3889999999985 588888888889
Q ss_pred CCCEEEEECCCC---cHHH-------HHHcCC--c-ccCHHHhccccCEEEEeC----CCChh--------ccccccHHH
Q 046427 214 LGMNVIAHDPYA---QADR-------ARATGV--G-LVSFEEAISTADFISLHM----PLTPA--------TSKMFNDEA 268 (595)
Q Consensus 214 ~G~~V~~~d~~~---~~~~-------a~~~g~--~-~~~l~ell~~aD~V~l~~----Plt~~--------t~~li~~~~ 268 (595)
||++|....|.. +.+. +++.|. . ..+++++++++|+|..-+ ....+ ....++.+.
T Consensus 178 ~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~y~v~~~~ 257 (321)
T 1oth_A 178 FGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQGYQVTMKT 257 (321)
T ss_dssp GTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTTCCBCHHH
T ss_pred cCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccCceECHHH
Confidence 999999988753 2211 113453 3 348999999999999843 11111 114467778
Q ss_pred HhcCCCceEEEecc
Q 046427 269 FFKMKKGVRIVNVA 282 (595)
Q Consensus 269 l~~mk~gailiN~a 282 (595)
++.+|++++|.-|.
T Consensus 258 l~~a~~dai~mH~l 271 (321)
T 1oth_A 258 AKVAASDWTFLHCL 271 (321)
T ss_dssp HHTSCTTCEEEECS
T ss_pred HhhcCCCCEEECCC
Confidence 88888888888876
No 274
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.03 E-value=0.009 Score=63.05 Aligned_cols=64 Identities=16% Similarity=0.302 Sum_probs=49.9
Q ss_pred CEEEEEeCC-hHHHHHHHHHhcC-CCEEE-EECCCCc--HHHHHHcCCcc-cCHHHhccc--cCEEEEeCCC
Q 046427 193 KTLAVMGFG-KVGTEVARRAKGL-GMNVI-AHDPYAQ--ADRARATGVGL-VSFEEAIST--ADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG-~IG~~vA~~l~~~-G~~V~-~~d~~~~--~~~a~~~g~~~-~~l~ell~~--aD~V~l~~Pl 256 (595)
.+|||||+| .+|+..+..++.. ++++. ++|++.. ...+.+.|+.. .++++++++ .|+|++++|.
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~ 74 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPH 74 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCG
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCc
Confidence 379999999 9999999998865 67766 4788753 23445667754 489999985 9999999994
No 275
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=96.02 E-value=0.0064 Score=63.25 Aligned_cols=65 Identities=15% Similarity=0.229 Sum_probs=46.9
Q ss_pred CEEEEEeCChHHHH-HHHHHhcC-CCEEE-EECCCCcHHHHHHcCCc-ccCHHHhccc--cCEEEEeCCCC
Q 046427 193 KTLAVMGFGKVGTE-VARRAKGL-GMNVI-AHDPYAQADRARATGVG-LVSFEEAIST--ADFISLHMPLT 257 (595)
Q Consensus 193 ktvGIIGlG~IG~~-vA~~l~~~-G~~V~-~~d~~~~~~~a~~~g~~-~~~l~ell~~--aD~V~l~~Plt 257 (595)
.+|||||+|.||+. .++.++.. ++++. ++|++.........++. +.++++++++ .|+|++|+|..
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 78 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFNDPSIDLIVIPTPND 78 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEESCHHHHHHCSSCCEEEECSCTT
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEeCChH
Confidence 37999999999997 77877765 78876 57876532221112333 3489999976 99999999943
No 276
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.01 E-value=0.0081 Score=65.34 Aligned_cols=93 Identities=15% Similarity=0.217 Sum_probs=58.3
Q ss_pred cceeeecCCEEEEEeCChHHHHHHHHHhcC-CCEEEEECCCCcH-H-HHHHcCCcc--c------CHHHhccccCEEEEe
Q 046427 185 YVGVSLVGKTLAVMGFGKVGTEVARRAKGL-GMNVIAHDPYAQA-D-RARATGVGL--V------SFEEAISTADFISLH 253 (595)
Q Consensus 185 ~~g~~l~gktvGIIGlG~IG~~vA~~l~~~-G~~V~~~d~~~~~-~-~a~~~g~~~--~------~l~ell~~aD~V~l~ 253 (595)
..+..+.+++|+|+|.|.+|+.+++.|... |.+|.++|++... + .+...++.. . ++.++++++|+|+.|
T Consensus 16 ~~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~ 95 (467)
T 2axq_A 16 HIEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISL 95 (467)
T ss_dssp -------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEEC
T ss_pred ccccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEEC
Confidence 345678899999999999999999999976 7899999987532 1 122223321 1 356778899999999
Q ss_pred CCCChhccccccHHHHhcCCCceEEEecc
Q 046427 254 MPLTPATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 254 ~Plt~~t~~li~~~~l~~mk~gailiN~a 282 (595)
+|..-. .. +.. ..++.|..+++++
T Consensus 96 tp~~~~-~~-v~~---a~l~~g~~vvd~~ 119 (467)
T 2axq_A 96 IPYTFH-PN-VVK---SAIRTKTDVVTSS 119 (467)
T ss_dssp SCGGGH-HH-HHH---HHHHHTCEEEECS
T ss_pred Cchhhh-HH-HHH---HHHhcCCEEEEee
Confidence 995421 11 111 1234566666664
No 277
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.00 E-value=0.0033 Score=61.39 Aligned_cols=64 Identities=19% Similarity=0.291 Sum_probs=41.4
Q ss_pred CEEEEEeCChHHHHHHHH--HhcCCCEEEE-ECCCCcHHHHHHcCCc---ccCHHHhccccCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGTEVARR--AKGLGMNVIA-HDPYAQADRARATGVG---LVSFEEAISTADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~--l~~~G~~V~~-~d~~~~~~~a~~~g~~---~~~l~ell~~aD~V~l~~Pl 256 (595)
++++|||.|++|+.+|+. ....|+++.+ +|.++......-.|+. ..++++++++.|.+++|+|.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs 155 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPA 155 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCc
Confidence 469999999999999994 3456888776 5765532111112322 23688998777999999994
No 278
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.00 E-value=0.013 Score=61.15 Aligned_cols=84 Identities=18% Similarity=0.232 Sum_probs=51.9
Q ss_pred EEEEEeCChHHHHHHHHHhcC-CCEEEE-ECCCCcH--HHHHHcCCccc------------------CHHHhccccCEEE
Q 046427 194 TLAVMGFGKVGTEVARRAKGL-GMNVIA-HDPYAQA--DRARATGVGLV------------------SFEEAISTADFIS 251 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~-G~~V~~-~d~~~~~--~~a~~~g~~~~------------------~l~ell~~aD~V~ 251 (595)
+|||+|+|+||+.+++.+... ++++.+ +|+.... ..+...|+... +++++++++|+|+
T Consensus 3 kVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV~ 82 (340)
T 1b7g_O 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV 82 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEEE
Confidence 799999999999999999865 578765 4554321 22333333211 3446667899999
Q ss_pred EeCCCChhccccccHHHHhcCCCceEEEecc
Q 046427 252 LHMPLTPATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 252 l~~Plt~~t~~li~~~~l~~mk~gailiN~a 282 (595)
.|+|... +.... .. .++.|+.+|+.+
T Consensus 83 ~aTp~~~-s~~~a--~~--~~~aG~kvV~~s 108 (340)
T 1b7g_O 83 DTTPNGV-GAQYK--PI--YLQLQRNAIFQG 108 (340)
T ss_dssp ECCSTTH-HHHHH--HH--HHHTTCEEEECT
T ss_pred ECCCCch-hHHHH--HH--HHHcCCeEEEeC
Confidence 9998432 22221 11 234566666654
No 279
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.98 E-value=0.012 Score=60.42 Aligned_cols=63 Identities=16% Similarity=0.239 Sum_probs=46.5
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcHHHH--HH--c-------CC--cc-cCHHHhccccCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQADRA--RA--T-------GV--GL-VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a--~~--~-------g~--~~-~~l~ell~~aD~V~l~~Pl 256 (595)
++|+|||.|.+|..+|..+...|. +|..+|........ .+ . .. .. .+. +.+++||+|+++++.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~ 80 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGA 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCC
Confidence 589999999999999999988886 89999986532111 11 1 11 12 356 779999999999863
No 280
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=95.98 E-value=0.0092 Score=62.04 Aligned_cols=63 Identities=19% Similarity=0.292 Sum_probs=47.1
Q ss_pred EEEEEeCChHHH-HHHHHHhcC-CCEEE-EECCCCcHHHHHH---cCCc-ccCHHHhccc--cCEEEEeCCC
Q 046427 194 TLAVMGFGKVGT-EVARRAKGL-GMNVI-AHDPYAQADRARA---TGVG-LVSFEEAIST--ADFISLHMPL 256 (595)
Q Consensus 194 tvGIIGlG~IG~-~vA~~l~~~-G~~V~-~~d~~~~~~~a~~---~g~~-~~~l~ell~~--aD~V~l~~Pl 256 (595)
+|||||+|.||+ ..+..++.. +++|. ++|++.....+.+ .++. +.++++++++ .|+|++|+|.
T Consensus 4 rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 75 (349)
T 3i23_A 4 KMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPA 75 (349)
T ss_dssp EEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCG
T ss_pred EEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCc
Confidence 799999999999 567767665 78876 5787743344444 3554 3489999986 8999999994
No 281
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=95.96 E-value=0.015 Score=58.64 Aligned_cols=65 Identities=18% Similarity=0.177 Sum_probs=49.1
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcH--HHHHHcCCccc-CHHHhccccCEEEEeCCCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQA--DRARATGVGLV-SFEEAISTADFISLHMPLT 257 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~--~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt 257 (595)
.++++.|+|.|.+|++++..|...|. +|.+++|.... ..+.+.+.... ++. +.++|+|+.++|..
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~g 186 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIG 186 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCC
Confidence 46899999999999999999999997 79999997532 23334444332 222 46899999999964
No 282
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=95.92 E-value=0.11 Score=53.64 Aligned_cols=134 Identities=15% Similarity=0.138 Sum_probs=85.0
Q ss_pred HHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCC--hHHHHHHHHHh
Q 046427 135 ATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFG--KVGTEVARRAK 212 (595)
Q Consensus 135 a~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~l~ 212 (595)
|...+|+|.|.-.....++ .+++=++.+.++... ... ....+.|.+|++||=| ++..+++..+.
T Consensus 118 A~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~g~----------~~~--~~~~l~gl~va~vGD~~~~va~Sl~~~~~ 183 (328)
T 3grf_A 118 AQHASVPCINALDDFGHPL--QMVCDFMTIKEKFTA----------AGE--FSNGFKGIKFAYCGDSMNNVTYDLMRGCA 183 (328)
T ss_dssp HHHCSSCEEESSCSSCCHH--HHHHHHHHHHHHHHH----------TTC--CTTTGGGCCEEEESCCSSHHHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHhCC----------ccc--cccccCCcEEEEeCCCCcchHHHHHHHHH
Confidence 4456789999866543333 233333444443211 000 1124889999999986 89999999999
Q ss_pred cCCCEEEEECCCC-c----HH---HH----HH--cCCc---ccCHHHhccccCEEEEe----CCCChh---------ccc
Q 046427 213 GLGMNVIAHDPYA-Q----AD---RA----RA--TGVG---LVSFEEAISTADFISLH----MPLTPA---------TSK 262 (595)
Q Consensus 213 ~~G~~V~~~d~~~-~----~~---~a----~~--~g~~---~~~l~ell~~aD~V~l~----~Plt~~---------t~~ 262 (595)
.||++|....|.. . .+ .+ .+ .|.. ..++++.+++||+|..- +-..++ ...
T Consensus 184 ~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvytd~W~sm~iq~er~~~~~~~~~~y 263 (328)
T 3grf_A 184 LLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDVVYTDSWMSYHITKEQKEARLKVLTPF 263 (328)
T ss_dssp HHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSEEEECCCC--------CCTHHHHHGGG
T ss_pred HcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCEEEecCccccCCcHHHHHHHHHHhcCC
Confidence 9999999987743 1 11 11 22 4532 24899999999999863 121110 124
Q ss_pred cccHHHHhcCCCceEEEecc
Q 046427 263 MFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 263 li~~~~l~~mk~gailiN~a 282 (595)
.++.+.++.+|++++|.-|.
T Consensus 264 ~vt~~~l~~a~~~ai~mH~l 283 (328)
T 3grf_A 264 QVDDAVMAVTSKRSIFMNCL 283 (328)
T ss_dssp CBCHHHHTTSCTTCEEEECS
T ss_pred CCCHHHHHhcCCCCEEECCC
Confidence 47888888899999999887
No 283
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=95.92 E-value=0.12 Score=53.73 Aligned_cols=130 Identities=15% Similarity=0.191 Sum_probs=81.7
Q ss_pred hHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeC-ChHHHHHHHHHh
Q 046427 134 AATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGF-GKVGTEVARRAK 212 (595)
Q Consensus 134 aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGl-G~IG~~vA~~l~ 212 (595)
.|...+|+|.|.-+....++ .+++=++.+.++.+ .|..+.|++|++||= +++..+++..+.
T Consensus 135 lA~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~~----------------~G~~l~glkva~vGD~~rva~Sl~~~~~ 196 (339)
T 4a8t_A 135 LANCATIPVINGMSDYNHPT--QELGDLCTMVEHLP----------------EGKKLEDCKVVFVGDATQVCFSLGLITT 196 (339)
T ss_dssp HHHHCSSCEEECCCSSCCHH--HHHHHHHHHHHTCC----------------TTCCGGGCEEEEESSCCHHHHHHHHHHH
T ss_pred HHHhCCCCEEECCCCCcCcH--HHHHHHHHHHHHhh----------------cCCCCCCCEEEEECCCchhHHHHHHHHH
Confidence 34556899999865433332 22232333333110 022488999999986 688999999999
Q ss_pred cCCCEEEEECCCC---cHHH-------HHHcCCc---ccCHHHhccccCEEEEeC--CCC--h----h----c--ccccc
Q 046427 213 GLGMNVIAHDPYA---QADR-------ARATGVG---LVSFEEAISTADFISLHM--PLT--P----A----T--SKMFN 265 (595)
Q Consensus 213 ~~G~~V~~~d~~~---~~~~-------a~~~g~~---~~~l~ell~~aD~V~l~~--Plt--~----~----t--~~li~ 265 (595)
.||++|....|.. +... +.+.|.. ..+++ .+++||+|..-+ ... . + . ...++
T Consensus 197 ~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~w~smg~~~~~~~er~~~~~~~y~vt 275 (339)
T 4a8t_A 197 KMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVN 275 (339)
T ss_dssp HTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECCSSCCTTSCCCHHHHHHHHTTTTCBC
T ss_pred HcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecCcccCCchhhhhHHHHHHhccccccC
Confidence 9999999988743 2211 2344542 24788 999999999732 111 1 1 0 14466
Q ss_pred HHHHhcCCCceEEEecc
Q 046427 266 DEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 266 ~~~l~~mk~gailiN~a 282 (595)
.+.++.+|++++|.-|.
T Consensus 276 ~ell~~ak~dai~mHcL 292 (339)
T 4a8t_A 276 QEMMDRAGANCKFMHCL 292 (339)
T ss_dssp HHHHHHHCTTCEEEECS
T ss_pred HHHHHhcCCCcEEECCC
Confidence 77777777777777776
No 284
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=95.92 E-value=0.0076 Score=62.91 Aligned_cols=64 Identities=13% Similarity=0.219 Sum_probs=47.6
Q ss_pred CEEEEEeCChHHHH-HHHHHhcC-CCEEE-EECCCCcHHHHHHc-CCc-ccCHHHhcc--ccCEEEEeCCCC
Q 046427 193 KTLAVMGFGKVGTE-VARRAKGL-GMNVI-AHDPYAQADRARAT-GVG-LVSFEEAIS--TADFISLHMPLT 257 (595)
Q Consensus 193 ktvGIIGlG~IG~~-vA~~l~~~-G~~V~-~~d~~~~~~~a~~~-g~~-~~~l~ell~--~aD~V~l~~Plt 257 (595)
.+|||||+|.||+. .++.++.. +++|. ++|++... .+... ++. +.+++++++ +.|+|++|+|..
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 76 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEE-VKRDFPDAEVVHELEEITNDPAIELVIVTTPSG 76 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHH-HHHHCTTSEEESSTHHHHTCTTCCEEEECSCTT
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH-HHhhCCCCceECCHHHHhcCCCCCEEEEcCCcH
Confidence 37999999999997 67777765 78876 46876532 33344 443 348999998 789999999953
No 285
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.91 E-value=0.016 Score=59.93 Aligned_cols=88 Identities=19% Similarity=0.237 Sum_probs=66.5
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc--CHHHhccccCEEEEeCCCChhccccccHH
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV--SFEEAISTADFISLHMPLTPATSKMFNDE 267 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~--~l~ell~~aD~V~l~~Plt~~t~~li~~~ 267 (595)
.|.+|.|+|.|.+|...++.++.+|.+|++.++.. ..+.++++|...+ +.+++.+..|+|+-++.... . -..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~----~-~~~ 250 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHY----D-LKD 250 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCC----C-HHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHH----H-HHH
Confidence 47899999999999999999999999999998766 5567778886432 33444446888888876432 1 244
Q ss_pred HHhcCCCceEEEeccC
Q 046427 268 AFFKMKKGVRIVNVAR 283 (595)
Q Consensus 268 ~l~~mk~gailiN~ar 283 (595)
.+..++++..++.++.
T Consensus 251 ~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 251 YLKLLTYNGDLALVGL 266 (348)
T ss_dssp HHTTEEEEEEEEECCC
T ss_pred HHHHHhcCCEEEEECC
Confidence 5677888888888864
No 286
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.88 E-value=0.01 Score=60.88 Aligned_cols=111 Identities=10% Similarity=0.108 Sum_probs=65.0
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCC--EEEEECCCCc-HHHHH---Hc---CCcc-cCHHHhccccCEEEEeCCCCh----
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGM--NVIAHDPYAQ-ADRAR---AT---GVGL-VSFEEAISTADFISLHMPLTP---- 258 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~-~~~a~---~~---g~~~-~~l~ell~~aD~V~l~~Plt~---- 258 (595)
++|+|||.|.+|..+|..+...|+ +|..||.... ...+. .. .+.. .++ +.+++||+|+++.....
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~t 93 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSSQS 93 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----CC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCCCC
Confidence 689999999999999999887677 9999998652 11111 11 1222 366 67899999999973211
Q ss_pred ------hcccccc--HHHHhcCCCceEEEeccCCchhcHHHHHHH--HhcCCeeEE
Q 046427 259 ------ATSKMFN--DEAFFKMKKGVRIVNVARGGVVDEEALVRA--LDSGIISQA 304 (595)
Q Consensus 259 ------~t~~li~--~~~l~~mk~gailiN~arg~~vd~~aL~~a--L~~g~i~ga 304 (595)
++..++. ...+....|++++++++---=+....+.+. +...++.|.
T Consensus 94 R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~~~t~~~~~~~~~p~~rviG~ 149 (303)
T 2i6t_A 94 YLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGI 149 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHHHHHHHHHHhcCCCHHHeeCC
Confidence 1111111 112333358899988765221223333333 334466665
No 287
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.85 E-value=0.012 Score=61.00 Aligned_cols=93 Identities=14% Similarity=0.106 Sum_probs=58.6
Q ss_pred ecCCEEEEEeCChHHHHHHHHHhcCCC--EEEEECCCCcHHH--HHH--c------CCcc-cCHHHhccccCEEEEeCCC
Q 046427 190 LVGKTLAVMGFGKVGTEVARRAKGLGM--NVIAHDPYAQADR--ARA--T------GVGL-VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 190 l~gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~~--~------g~~~-~~l~ell~~aD~V~l~~Pl 256 (595)
-.+++|+|||.|.||+++|..+...|+ ++..||....... +.+ . ++.. .+..+.+++||+|+++...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 356799999999999999999987666 9999998642111 111 1 1111 2346789999999998763
Q ss_pred Ch---hcc-ccc--cH-------HHHhcCCCceEEEecc
Q 046427 257 TP---ATS-KMF--ND-------EAFFKMKKGVRIVNVA 282 (595)
Q Consensus 257 t~---~t~-~li--~~-------~~l~~mk~gailiN~a 282 (595)
.. +++ +++ |. +.+....|++++++++
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt 125 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp C----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 21 112 122 11 2344456788888885
No 288
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=95.81 E-value=0.017 Score=62.95 Aligned_cols=103 Identities=13% Similarity=0.130 Sum_probs=67.1
Q ss_pred CEEEEEeC----ChHHHHHHHHHhcC--CCEEE-EECCCCcH--HHHHHcCCc----ccCHHHhcc--ccCEEEEeCCCC
Q 046427 193 KTLAVMGF----GKVGTEVARRAKGL--GMNVI-AHDPYAQA--DRARATGVG----LVSFEEAIS--TADFISLHMPLT 257 (595)
Q Consensus 193 ktvGIIGl----G~IG~~vA~~l~~~--G~~V~-~~d~~~~~--~~a~~~g~~----~~~l~ell~--~aD~V~l~~Plt 257 (595)
.+|||||+ |.||+..++.++.. ++++. ++|++... ..+.+.|+. +.+++++++ +.|+|++|+|..
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp~~ 119 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKVP 119 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSCHH
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCCcH
Confidence 47999999 99999999999876 78865 57887532 334556764 458999996 699999999942
Q ss_pred hhccccccHHHHhcCCCc-------eEEEecc-CCchhcHHHHHHHHhcCC
Q 046427 258 PATSKMFNDEAFFKMKKG-------VRIVNVA-RGGVVDEEALVRALDSGI 300 (595)
Q Consensus 258 ~~t~~li~~~~l~~mk~g-------ailiN~a-rg~~vd~~aL~~aL~~g~ 300 (595)
. -..+ ....++.| .+++.-= --.+-+.++|+++.++..
T Consensus 120 ~-H~~~----~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g 165 (479)
T 2nvw_A 120 E-HYEV----VKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRA 165 (479)
T ss_dssp H-HHHH----HHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCT
T ss_pred H-HHHH----HHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcC
Confidence 2 1111 12224444 3666631 123334567777665543
No 289
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=95.81 E-value=0.091 Score=54.53 Aligned_cols=128 Identities=22% Similarity=0.263 Sum_probs=84.3
Q ss_pred hHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeC-ChHHHHHHHHHh
Q 046427 134 AATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGF-GKVGTEVARRAK 212 (595)
Q Consensus 134 aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGl-G~IG~~vA~~l~ 212 (595)
.|...+|+|.|.-+....++ .+++=++.+.++ .| .+.|++|++||= +++..+++..+.
T Consensus 142 lA~~~~vPVINag~~~~HPt--QaLaDl~TI~E~------------------~G-~l~glkva~vGD~~nva~Sl~~~~~ 200 (340)
T 4ep1_A 142 LAKESSIPVINGLTDDHHPC--QALADLMTIYEE------------------TN-TFKGIKLAYVGDGNNVCHSLLLASA 200 (340)
T ss_dssp HHHHCSSCEEEEECSSCCHH--HHHHHHHHHHHH------------------HS-CCTTCEEEEESCCCHHHHHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHH------------------hC-CCCCCEEEEECCCchhHHHHHHHHH
Confidence 34556899999755433222 222223333331 12 378999999996 678899999999
Q ss_pred cCCCEEEEECCCC---cHHH-------HHHcCCc---ccCHHHhccccCEEEEeCCCCh------h-----ccccccHHH
Q 046427 213 GLGMNVIAHDPYA---QADR-------ARATGVG---LVSFEEAISTADFISLHMPLTP------A-----TSKMFNDEA 268 (595)
Q Consensus 213 ~~G~~V~~~d~~~---~~~~-------a~~~g~~---~~~l~ell~~aD~V~l~~Plt~------~-----t~~li~~~~ 268 (595)
.||++|....|.. +... +++.|.. ..++++++++||+|..-.=... + ....++.+.
T Consensus 201 ~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~w~smg~e~~~~~~~~~~~y~vt~el 280 (340)
T 4ep1_A 201 KVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVWMSMGQEGEEEKYTLFQPYQINKEL 280 (340)
T ss_dssp HHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECCC------CHHHHHHHHGGGCBCHHH
T ss_pred HcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecCccCCCCCchHHHHHHhccccCCHHH
Confidence 9999999987743 2211 2245643 2489999999999987442110 0 124578888
Q ss_pred HhcCCCceEEEecc
Q 046427 269 FFKMKKGVRIVNVA 282 (595)
Q Consensus 269 l~~mk~gailiN~a 282 (595)
++.+|++++|.-|.
T Consensus 281 l~~ak~dai~MHcL 294 (340)
T 4ep1_A 281 VKHAKQTYHFLHCL 294 (340)
T ss_dssp HTTSCTTCEEEECS
T ss_pred HHhcCCCcEEECCC
Confidence 88889999999887
No 290
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.81 E-value=0.024 Score=61.75 Aligned_cols=100 Identities=23% Similarity=0.252 Sum_probs=69.5
Q ss_pred eeeecCCEEEEEeCCh----------HHHHHHHHHhcCCCEEEEECCCCcHHHHHHc------------CCccc-CHHHh
Q 046427 187 GVSLVGKTLAVMGFGK----------VGTEVARRAKGLGMNVIAHDPYAQADRARAT------------GVGLV-SFEEA 243 (595)
Q Consensus 187 g~~l~gktvGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~------------g~~~~-~l~el 243 (595)
+..+.|++|+|+|+-- =...+++.|...|.+|.+|||....+..... .+.++ ++.+.
T Consensus 323 ~~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (478)
T 2y0c_A 323 GEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQA 402 (478)
T ss_dssp CSCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHTTTCHHHHTTEEECSSHHHH
T ss_pred cccCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCccHHHHHhhccccccccccccceeecCCHHHH
Confidence 4468999999999843 5677999999999999999998743211212 24443 67899
Q ss_pred ccccCEEEEeCCCChhccccccHHHH-hcCCCceEEEeccCCchhcHHH
Q 046427 244 ISTADFISLHMPLTPATSKMFNDEAF-FKMKKGVRIVNVARGGVVDEEA 291 (595)
Q Consensus 244 l~~aD~V~l~~Plt~~t~~li~~~~l-~~mk~gailiN~arg~~vd~~a 291 (595)
+++||+|++++.- ++-+.+ +-+.+ +.|+ ..+|+|+ |+ +.+.+.
T Consensus 403 ~~~ad~~vi~t~~-~~f~~~-~~~~~~~~~~-~~~i~D~-r~-~~~~~~ 446 (478)
T 2y0c_A 403 ARDADALVIVTEW-KIFKSP-DFVALGRLWK-TPVIFDG-RN-LYEPET 446 (478)
T ss_dssp TTTCSEEEECSCC-GGGGSC-CHHHHHTTCS-SCEEEES-SC-CSCHHH
T ss_pred HhCCCEEEEecCC-hHhhcc-CHHHHHhhcC-CCEEEEC-CC-CCCHHH
Confidence 9999999999984 444433 44444 4465 4788987 54 345543
No 291
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=95.79 E-value=0.012 Score=61.09 Aligned_cols=102 Identities=14% Similarity=0.143 Sum_probs=60.1
Q ss_pred CEEEEEeCChHHHH-HHH-HHh-cCCCEEE-EECCCCcH-HHHHH-cCCc-ccCHHHhccc--cCEEEEeCCCChhcccc
Q 046427 193 KTLAVMGFGKVGTE-VAR-RAK-GLGMNVI-AHDPYAQA-DRARA-TGVG-LVSFEEAIST--ADFISLHMPLTPATSKM 263 (595)
Q Consensus 193 ktvGIIGlG~IG~~-vA~-~l~-~~G~~V~-~~d~~~~~-~~a~~-~g~~-~~~l~ell~~--aD~V~l~~Plt~~t~~l 263 (595)
.+|||||+|.||+. .+. .++ .-++++. ++|++... ..+.+ .++. +.++++++++ .|+|++|+|.... ..+
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h-~~~ 81 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSH-FEY 81 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGH-HHH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHH-HHH
Confidence 37999999999996 455 334 3478877 68887632 22222 2444 3489999986 9999999994321 111
Q ss_pred ccHHHHhcCCCceEEEecc--CCchhcHHHHHHHHhcC
Q 046427 264 FNDEAFFKMKKGVRIVNVA--RGGVVDEEALVRALDSG 299 (595)
Q Consensus 264 i~~~~l~~mk~gailiN~a--rg~~vd~~aL~~aL~~g 299 (595)
....++.|.-++.-- --.+-+.++|.++.++.
T Consensus 82 ----~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~ 115 (345)
T 3f4l_A 82 ----AKRALEAGKNVLVEKPFTPTLAQAKELFALAKSK 115 (345)
T ss_dssp ----HHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred ----HHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 223345555444322 12223445566655543
No 292
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=95.79 E-value=0.0079 Score=63.91 Aligned_cols=63 Identities=17% Similarity=0.272 Sum_probs=48.0
Q ss_pred EEEEEeCChHHHHHHHHHhcC---------CCEEEE-ECCCCc--HHHHHHcCCc--ccCHHHhcc--ccCEEEEeCCC
Q 046427 194 TLAVMGFGKVGTEVARRAKGL---------GMNVIA-HDPYAQ--ADRARATGVG--LVSFEEAIS--TADFISLHMPL 256 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~---------G~~V~~-~d~~~~--~~~a~~~g~~--~~~l~ell~--~aD~V~l~~Pl 256 (595)
+|||||+|.||+..++.++.. +.+|.+ +|++.. ...+++.|+. +.+++++++ +.|+|++|+|.
T Consensus 28 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~ 106 (412)
T 4gqa_A 28 NIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPN 106 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCc
Confidence 899999999999888877643 457665 688763 3345667774 358999996 58999999994
No 293
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.79 E-value=0.017 Score=59.40 Aligned_cols=110 Identities=15% Similarity=0.092 Sum_probs=67.8
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCC--CEEEEECCCCcH-H-HHHH--c-------CCcc-cCHHHhccccCEEEEeCCCC
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLG--MNVIAHDPYAQA-D-RARA--T-------GVGL-VSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~-~-~a~~--~-------g~~~-~~l~ell~~aD~V~l~~Plt 257 (595)
..+|+|||.|.+|.++|..+...| -+|..||..... + .+.. . .+.. .+..+.+++||+|+++.+..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~~ 85 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGAA 85 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCCC
Confidence 468999999999999999988666 489999976421 1 1111 1 1111 14567799999999999753
Q ss_pred hhcccc-----c--cH-------HHHhcCCCceEEEeccCCchhc--HHHHHHH--HhcCCeeEE
Q 046427 258 PATSKM-----F--ND-------EAFFKMKKGVRIVNVARGGVVD--EEALVRA--LDSGIISQA 304 (595)
Q Consensus 258 ~~t~~l-----i--~~-------~~l~~mk~gailiN~arg~~vd--~~aL~~a--L~~g~i~ga 304 (595)
. ..+. + |. +.+....|++++++++ ..+| ...+.+. +...++.|.
T Consensus 86 ~-~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~t~~~~k~~~~p~~rviG~ 147 (317)
T 3d0o_A 86 Q-KPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT--NPVDILAYATWKFSGLPKERVIGS 147 (317)
T ss_dssp C-CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred C-CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec--CcHHHHHHHHHHHhCCCHHHEEec
Confidence 2 2211 0 11 1233447899999975 3344 3344443 444466555
No 294
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.77 E-value=0.02 Score=61.83 Aligned_cols=111 Identities=15% Similarity=0.214 Sum_probs=71.5
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-----HHHHHHcCCccc---CHHHhccc-cCEEEEeCCCChh
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-----ADRARATGVGLV---SFEEAIST-ADFISLHMPLTPA 259 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-----~~~a~~~g~~~~---~l~ell~~-aD~V~l~~Plt~~ 259 (595)
++.||+|.|||+|..|.++|+.|+..|++|.++|.... .+..++.|++.. ..++++.+ +|+|++.--..+.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYN 85 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTT
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCC
Confidence 46799999999999999999999999999999998541 123455687543 34456676 9999986332221
Q ss_pred cc----------ccccHH-HHhc-CCCceEEEeccCCchhcHHHHHHHHhcC
Q 046427 260 TS----------KMFNDE-AFFK-MKKGVRIVNVARGGVVDEEALVRALDSG 299 (595)
Q Consensus 260 t~----------~li~~~-~l~~-mk~gailiN~arg~~vd~~aL~~aL~~g 299 (595)
+. .++.+. .+.. ++.-.+-|-=+.|+.-...-+...|+..
T Consensus 86 ~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~ 137 (451)
T 3lk7_A 86 NPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAG 137 (451)
T ss_dssp SHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHT
T ss_pred ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhc
Confidence 11 133332 2333 3433344444478876566666666643
No 295
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.77 E-value=0.014 Score=63.61 Aligned_cols=98 Identities=22% Similarity=0.326 Sum_probs=70.4
Q ss_pred eeeecCCEEEEEeCCh----------HHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcc-cCHHHhccccCEEEEeCC
Q 046427 187 GVSLVGKTLAVMGFGK----------VGTEVARRAKGLGMNVIAHDPYAQADRARATGVGL-VSFEEAISTADFISLHMP 255 (595)
Q Consensus 187 g~~l~gktvGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~-~~l~ell~~aD~V~l~~P 255 (595)
+..+.|++|+|+|+-- =...+++.|...|.+|.+|||....- ..+.+ .++++.++.||.|+++++
T Consensus 348 ~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~~----~~~~~~~~~~~~~~~ad~vvi~t~ 423 (478)
T 3g79_A 348 GKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNY----PGVEISDNLEEVVRNADAIVVLAG 423 (478)
T ss_dssp TCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCCB----TTBCEESCHHHHHTTCSEEEECSC
T ss_pred ccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCcccc----cCcceecCHHHHHhcCCEEEEecC
Confidence 3468999999999853 35789999999999999999987511 11232 478999999999999997
Q ss_pred CChhccccccHH-HHhcCC-CceEEEeccCCchhcHHHH
Q 046427 256 LTPATSKMFNDE-AFFKMK-KGVRIVNVARGGVVDEEAL 292 (595)
Q Consensus 256 lt~~t~~li~~~-~l~~mk-~gailiN~arg~~vd~~aL 292 (595)
.++-+.+ +-+ ..+.|+ +..+|+|+ |+- .|.+.+
T Consensus 424 -~~~f~~~-d~~~~~~~~~~~~~~i~D~-rn~-~~~~~~ 458 (478)
T 3g79_A 424 -HSAYSSL-KADWAKKVSAKANPVIIDG-RNV-IEPDEF 458 (478)
T ss_dssp -CHHHHSC-CHHHHHHHHCCSSCEEEES-SSC-SCHHHH
T ss_pred -CHHHHhh-hHHHHHHHhccCCCEEEEC-CCC-CCHHHH
Confidence 4544443 433 344677 47899995 654 465544
No 296
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=95.76 E-value=0.024 Score=60.91 Aligned_cols=87 Identities=20% Similarity=0.253 Sum_probs=65.5
Q ss_pred eecCCEEEEEeCCh----------HHHHHHHHHhcC-CCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCC
Q 046427 189 SLVGKTLAVMGFGK----------VGTEVARRAKGL-GMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 189 ~l~gktvGIIGlG~----------IG~~vA~~l~~~-G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt 257 (595)
.+.|++|+|+|+-- -...+++.|... |.+|.+|||..... ....++++.+++||.|+++++ .
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~------~~~~~~~~~~~~ad~vvi~t~-~ 384 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD------FVEHDMSHAVKDASLVLILSD-H 384 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT------TBCSTTHHHHTTCSEEEECSC-C
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc------cccCCHHHHHhCCCEEEEecC-C
Confidence 47899999999852 467899999988 99999999987532 233478999999999999997 4
Q ss_pred hhccccccHHHHhcCCCceEEEeccCCc
Q 046427 258 PATSKMFNDEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 258 ~~t~~li~~~~l~~mk~gailiN~arg~ 285 (595)
++-+.+ +-+.+..|+ +.+|+|+ |+-
T Consensus 385 ~~f~~~-d~~~~~~~~-~~~i~D~-r~~ 409 (431)
T 3ojo_A 385 SEFKNL-SDSHFDKMK-HKVIFDT-KNV 409 (431)
T ss_dssp GGGTSC-CGGGGTTCS-SCEEEES-SCC
T ss_pred HHHhcc-CHHHHHhCC-CCEEEEC-CCC
Confidence 444433 444456676 6788885 543
No 297
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.73 E-value=0.018 Score=59.40 Aligned_cols=109 Identities=14% Similarity=0.094 Sum_probs=65.7
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCC--EEEEECCCCcHHH--HHHc--C------Ccc-cCHHHhccccCEEEEeCCCChh
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGM--NVIAHDPYAQADR--ARAT--G------VGL-VSFEEAISTADFISLHMPLTPA 259 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~~~--g------~~~-~~l~ell~~aD~V~l~~Plt~~ 259 (595)
.+|+|||.|.+|.+++..+...+. ++..||....... +.++ . +.. .+..+.+++||+|+++.+...
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~- 84 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQ- 84 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC---
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCC-
Confidence 589999999999999999886565 8999998642111 1111 1 111 145677999999999987432
Q ss_pred cccc-----c--cH-------HHHhcCCCceEEEeccCCchhc--HHHHHHH--HhcCCeeEE
Q 046427 260 TSKM-----F--ND-------EAFFKMKKGVRIVNVARGGVVD--EEALVRA--LDSGIISQA 304 (595)
Q Consensus 260 t~~l-----i--~~-------~~l~~mk~gailiN~arg~~vd--~~aL~~a--L~~g~i~ga 304 (595)
..++ + |. +.+....|++++++++ ..+| ...+.+. +...++.|.
T Consensus 85 ~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t--NPv~~~t~~~~k~s~~p~~rviG~ 145 (318)
T 1ez4_A 85 KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA--NPVDILTYATWKFSGFPKERVIGS 145 (318)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC--CcHHHHHHHHHHHcCCCHHHEEec
Confidence 2211 1 11 1233347899999973 3444 3333343 444456555
No 298
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=95.69 E-value=0.058 Score=54.88 Aligned_cols=66 Identities=17% Similarity=0.155 Sum_probs=53.1
Q ss_pred eecCCEEEEEeC---ChHHHHHHHHHhcCCCEEEEECCCC--cHHHHHHcCCcc-cCHHHhccccCEEEEeCCC
Q 046427 189 SLVGKTLAVMGF---GKVGTEVARRAKGLGMNVIAHDPYA--QADRARATGVGL-VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 189 ~l~gktvGIIGl---G~IG~~vA~~l~~~G~~V~~~d~~~--~~~~a~~~g~~~-~~l~ell~~aD~V~l~~Pl 256 (595)
.+.|.+|++||= +++.++.+..+..+|++|....|.. +.+ ..+.|++. .++++++++||+|.. +-.
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~-~~~~g~~~~~d~~eav~~aDvvy~-~~~ 214 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRD-VEVFKVDVFDDVDKGIDWADVVIW-LRL 214 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTT-GGGGCEEEESSHHHHHHHCSEEEE-CCC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCch-HHHCCCEEEcCHHHHhCCCCEEEE-eCc
Confidence 388999999997 8999999999999999999988743 222 22456553 489999999999998 654
No 299
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.69 E-value=0.021 Score=58.81 Aligned_cols=92 Identities=17% Similarity=0.164 Sum_probs=59.8
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC--cHHHH--H----H-----cCC--cccCHHHhccccCEEEEeC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA--QADRA--R----A-----TGV--GLVSFEEAISTADFISLHM 254 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~--~~~~a--~----~-----~g~--~~~~l~ell~~aD~V~l~~ 254 (595)
..++|+|||.|.+|..+|..+...|+ +|..||... ..... . . ... ...+-.+.+++||+|+++.
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVITA 86 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEeC
Confidence 45799999999999999999998888 999999873 11111 0 0 111 1122257799999999997
Q ss_pred CCC--h-hcc-ccc--c----H---HHHhcCCCceEEEecc
Q 046427 255 PLT--P-ATS-KMF--N----D---EAFFKMKKGVRIVNVA 282 (595)
Q Consensus 255 Plt--~-~t~-~li--~----~---~~l~~mk~gailiN~a 282 (595)
... | .++ +++ | + +.+....|++++++++
T Consensus 87 g~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs 127 (315)
T 3tl2_A 87 GIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT 127 (315)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence 532 1 111 112 1 1 1233346888999987
No 300
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=95.68 E-value=0.018 Score=59.59 Aligned_cols=110 Identities=14% Similarity=0.085 Sum_probs=66.0
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCC--EEEEECCCCcHH--HHHH--cC------Ccc-cCHHHhccccCEEEEeCCCCh
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGM--NVIAHDPYAQAD--RARA--TG------VGL-VSFEEAISTADFISLHMPLTP 258 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~--~a~~--~g------~~~-~~l~ell~~aD~V~l~~Plt~ 258 (595)
..+|+|||.|.+|.+++..+...++ ++..||...... .+.+ .. +.. .+..+.+++||+|+++.+...
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~~ 88 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAPQ 88 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 3689999999999999999886554 899999864211 1111 11 111 145677999999999987532
Q ss_pred hcccc-------ccH-------HHHhcCCCceEEEeccCCchhc--HHHHHHH--HhcCCeeEE
Q 046427 259 ATSKM-------FND-------EAFFKMKKGVRIVNVARGGVVD--EEALVRA--LDSGIISQA 304 (595)
Q Consensus 259 ~t~~l-------i~~-------~~l~~mk~gailiN~arg~~vd--~~aL~~a--L~~g~i~ga 304 (595)
..++ .|. +.+....|++++++++ ..+| ...+.+. +...++.|.
T Consensus 89 -k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t--NPv~~~t~~~~k~s~~p~~rviG~ 149 (326)
T 2zqz_A 89 -KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA--NPVDILTYATWKLSGFPKNRVVGS 149 (326)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS--SSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC--CcHHHHHHHHHHHcCCCHHHEEEc
Confidence 2221 011 1233346899999973 3444 3333333 344456554
No 301
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=95.68 E-value=0.063 Score=56.11 Aligned_cols=128 Identities=23% Similarity=0.259 Sum_probs=86.6
Q ss_pred HHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCC--hHHHHHHHHHh
Q 046427 135 ATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFG--KVGTEVARRAK 212 (595)
Q Consensus 135 a~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~l~ 212 (595)
|.-.+|+|.|.-+....++ .+++=++.+.++. | .+.|.+|++||=| ++..+++..+.
T Consensus 140 A~~s~vPVINa~~~~~HPt--QaLaDl~Ti~E~~------------------g-~l~gl~va~vGD~~~rva~Sl~~~~~ 198 (359)
T 2w37_A 140 ARDSGVPVWNGLTDEWHPT--QMLADFMTVKENF------------------G-KLQGLTLTFMGDGRNNVANSLLVTGA 198 (359)
T ss_dssp HHHSSSCEEEEECSSCCHH--HHHHHHHHHHHHH------------------S-CCTTCEEEEESCTTSHHHHHHHHHHH
T ss_pred HHhCCCCEEcCCCCCCCcc--HHHHHHHHHHHHh------------------C-CcCCeEEEEECCCccchHHHHHHHHH
Confidence 4456799999765433333 2333334333311 2 4789999999996 99999999999
Q ss_pred cCCCEEEEECCCC---cHHH-------HHHcCCc---ccCHHHhccccCEEEEeCCC--C----hh-----ccccccHHH
Q 046427 213 GLGMNVIAHDPYA---QADR-------ARATGVG---LVSFEEAISTADFISLHMPL--T----PA-----TSKMFNDEA 268 (595)
Q Consensus 213 ~~G~~V~~~d~~~---~~~~-------a~~~g~~---~~~l~ell~~aD~V~l~~Pl--t----~~-----t~~li~~~~ 268 (595)
.+|++|....|.. +.+. +++.|.. ..++++++++||+|..-.=. . ++ ....++.+.
T Consensus 199 ~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~ee~~er~~~~~~y~v~~el 278 (359)
T 2w37_A 199 ILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDVWVSMGESNWEERVKELTPYQVNMEA 278 (359)
T ss_dssp HHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSCCTTCTTHHHHHHHHGGGCBCHHH
T ss_pred HcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEcccccccccchHHHHHHhhccccCHHH
Confidence 9999999988743 2211 1245643 34899999999999884320 0 00 135568888
Q ss_pred HhcCC---CceEEEeccC
Q 046427 269 FFKMK---KGVRIVNVAR 283 (595)
Q Consensus 269 l~~mk---~gailiN~ar 283 (595)
++.+| ++++|.-|.-
T Consensus 279 l~~ak~~~~dai~MHcLP 296 (359)
T 2w37_A 279 MKKTGTPDDQLIFMHCLP 296 (359)
T ss_dssp HHTTCCCGGGCEEEECSC
T ss_pred HHhhCCCCCCEEEECCCC
Confidence 88888 8999998863
No 302
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.67 E-value=0.0091 Score=62.40 Aligned_cols=91 Identities=11% Similarity=0.050 Sum_probs=63.5
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCC---c-HHHHHHcCCcccC---HHHhc----cccCEEEEeCCCC
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYA---Q-ADRARATGVGLVS---FEEAI----STADFISLHMPLT 257 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~---~-~~~a~~~g~~~~~---l~ell----~~aD~V~l~~Plt 257 (595)
.+.|++|.|+|.|.||..+++.++.+|.+|++.++.. . .+.++++|+..++ +.+.+ ...|+|+-++...
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 4669999999999999999999999999999998865 2 3455666764321 11111 3478888887643
Q ss_pred hhccccccHHHHhcCCCceEEEeccC
Q 046427 258 PATSKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 258 ~~t~~li~~~~l~~mk~gailiN~ar 283 (595)
... + ...+..|+++..+++++-
T Consensus 258 ~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 258 VNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp THH---H-HHHGGGEEEEEEEEECSC
T ss_pred HHH---H-HHHHHHHhcCCEEEEEec
Confidence 211 0 345566788888888763
No 303
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=95.66 E-value=0.14 Score=53.40 Aligned_cols=129 Identities=16% Similarity=0.195 Sum_probs=79.1
Q ss_pred HHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeC-ChHHHHHHHHHhc
Q 046427 135 ATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGF-GKVGTEVARRAKG 213 (595)
Q Consensus 135 a~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGl-G~IG~~vA~~l~~ 213 (595)
|...+|+|.|.-+....++ .+++=++.+.++.+ .|..+.|.+|++||= +++..+++..+..
T Consensus 114 A~~~~vPVINag~~~~HPt--QaLaDl~TI~E~~~----------------~G~~l~glkva~vGD~~rva~Sl~~~~~~ 175 (355)
T 4a8p_A 114 ANCATIPVINGMSDYNHPT--QELGDLCTMVEHLP----------------EGKKLEDCKVVFVGDATQVCFSLGLITTK 175 (355)
T ss_dssp HHHCSSCEEECCCSSCCHH--HHHHHHHHHHHTCC----------------TTCCGGGCEEEEESCCCHHHHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHhh----------------cCCCCCCCEEEEECCCchhHHHHHHHHHH
Confidence 4456789999865433332 22222333333110 022488999999986 6889999999999
Q ss_pred CCCEEEEECCCC---cHHH-------HHHcCCc---ccCHHHhccccCEEEEeC--CCCh------h----c--cccccH
Q 046427 214 LGMNVIAHDPYA---QADR-------ARATGVG---LVSFEEAISTADFISLHM--PLTP------A----T--SKMFND 266 (595)
Q Consensus 214 ~G~~V~~~d~~~---~~~~-------a~~~g~~---~~~l~ell~~aD~V~l~~--Plt~------~----t--~~li~~ 266 (595)
||++|....|.. +... +.+.|.. ..+++ .++++|+|..-+ ...+ + . ...++.
T Consensus 176 ~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~w~smgq~~~~~~er~~~~~~~y~vt~ 254 (355)
T 4a8p_A 176 MGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQ 254 (355)
T ss_dssp TTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECCSSEETTEECCHHHHHHHHTTTTCBCH
T ss_pred cCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecccccCcchhhhhHHHHHHhccccccCH
Confidence 999999988743 2211 2344542 24788 999999998732 1000 0 0 134566
Q ss_pred HHHhcCCCceEEEecc
Q 046427 267 EAFFKMKKGVRIVNVA 282 (595)
Q Consensus 267 ~~l~~mk~gailiN~a 282 (595)
+.++.+|++++|.-|.
T Consensus 255 ell~~ak~dai~MHcL 270 (355)
T 4a8p_A 255 EMMDRAGANCKFMHCL 270 (355)
T ss_dssp HHHHHHCTTCEEEECS
T ss_pred HHHHhcCCCcEEECCC
Confidence 6666667777776665
No 304
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.61 E-value=0.02 Score=59.66 Aligned_cols=90 Identities=22% Similarity=0.294 Sum_probs=65.4
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc-------CHHH-hccccCEEEEeCCCChhcc
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV-------SFEE-AISTADFISLHMPLTPATS 261 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~-------~l~e-ll~~aD~V~l~~Plt~~t~ 261 (595)
.|++|.|+|.|.+|...++.++.+|.+|++.++.. ..+.++++|...+ ++.+ +....|+|+-+++.++ .
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~--~ 256 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLT--D 256 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCST--T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCc--H
Confidence 47899999999999999999999999999998765 4566777886421 2222 2246899999887521 1
Q ss_pred ccccHHHHhcCCCceEEEeccC
Q 046427 262 KMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 262 ~li~~~~l~~mk~gailiN~ar 283 (595)
..+ ...++.|+++..++.++.
T Consensus 257 ~~~-~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 257 IDF-NIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp CCT-TTGGGGEEEEEEEEECCC
T ss_pred HHH-HHHHHHhcCCCEEEEecC
Confidence 112 234667888989998865
No 305
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.61 E-value=0.035 Score=58.01 Aligned_cols=64 Identities=13% Similarity=0.079 Sum_probs=48.1
Q ss_pred CEEEEEeCChHHH-HHHHHHhcCCCEEE-EECCCCc--HHHHHHcCC-c-ccCHHHhccc--cCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGT-EVARRAKGLGMNVI-AHDPYAQ--ADRARATGV-G-LVSFEEAIST--ADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~-~vA~~l~~~G~~V~-~~d~~~~--~~~a~~~g~-~-~~~l~ell~~--aD~V~l~~Pl 256 (595)
.+|||||+|.+|. .++..++.-++++. ++|++.. ...+.+.|. . +.++++++++ .|+|++|+|.
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~ 98 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVS 98 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCH
T ss_pred cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCCh
Confidence 5899999999995 56777777788866 4788763 234455663 3 4589999986 8999999993
No 306
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.61 E-value=0.023 Score=54.98 Aligned_cols=70 Identities=20% Similarity=0.270 Sum_probs=50.2
Q ss_pred eeecCCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHHcCC-cc------cCHHHhccccCEEEEeCCCC
Q 046427 188 VSLVGKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYAQA-DRARATGV-GL------VSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 188 ~~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~-~~------~~l~ell~~aD~V~l~~Plt 257 (595)
..+.||+|.|.|. |.||+.+++.|...|++|++.++.... ......++ +. .++.+.+..+|+|+.+....
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 4689999999998 999999999999999999999987632 22333344 32 23467777888888777643
No 307
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.57 E-value=0.014 Score=62.72 Aligned_cols=104 Identities=12% Similarity=0.119 Sum_probs=66.9
Q ss_pred CEEEEEeC----ChHHHHHHHHHhcC--CCEEE-EECCCCcH--HHHHHcCCc----ccCHHHhcc--ccCEEEEeCCCC
Q 046427 193 KTLAVMGF----GKVGTEVARRAKGL--GMNVI-AHDPYAQA--DRARATGVG----LVSFEEAIS--TADFISLHMPLT 257 (595)
Q Consensus 193 ktvGIIGl----G~IG~~vA~~l~~~--G~~V~-~~d~~~~~--~~a~~~g~~----~~~l~ell~--~aD~V~l~~Plt 257 (595)
.+|||||+ |.||+..++.++.. +++++ ++|++... ..+.+.|+. +.+++++++ +.|+|++|+|..
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 100 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQVA 100 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSCHH
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCCcH
Confidence 47999999 99999999999876 78865 57887532 334555664 358999996 699999999942
Q ss_pred hhccccccHHHHhcCCCc-------eEEEec-cCCchhcHHHHHHHHhcCCe
Q 046427 258 PATSKMFNDEAFFKMKKG-------VRIVNV-ARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 258 ~~t~~li~~~~l~~mk~g-------ailiN~-arg~~vd~~aL~~aL~~g~i 301 (595)
. -..+ ....++.| .+++.- .--.+-+.++|+++.++..+
T Consensus 101 ~-H~~~----~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~ 147 (438)
T 3btv_A 101 S-HYEV----VMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGV 147 (438)
T ss_dssp H-HHHH----HHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTC
T ss_pred H-HHHH----HHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCC
Confidence 2 1111 12223344 466652 12233345667776655433
No 308
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.57 E-value=0.018 Score=62.21 Aligned_cols=67 Identities=13% Similarity=0.214 Sum_probs=49.1
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHH--HHcC-Cc-----cc---CHHHhccccCEEEEeCCCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRA--RATG-VG-----LV---SFEEAISTADFISLHMPLT 257 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a--~~~g-~~-----~~---~l~ell~~aD~V~l~~Plt 257 (595)
.+|+++|+|.|.||+.+++.|...|.+|.++|++...... ...+ +. .. +++++++++|+|+.++|..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 4789999999999999999999999999999986532111 1111 11 11 3557788999999999964
No 309
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.57 E-value=0.076 Score=57.04 Aligned_cols=107 Identities=20% Similarity=0.300 Sum_probs=70.8
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEE-EC-------CCC-cHHHH----HHcC-------CcccCHHHhcc-
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIA-HD-------PYA-QADRA----RATG-------VGLVSFEEAIS- 245 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~-~d-------~~~-~~~~a----~~~g-------~~~~~l~ell~- 245 (595)
|.++.|++|.|.|+|++|+.+|+.|...|.+|++ .| +.- ..+.. .+.| .+.++.++++.
T Consensus 230 g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~~ 309 (440)
T 3aog_A 230 GLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGL 309 (440)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTTC
T ss_pred CCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhcC
Confidence 4578999999999999999999999999999984 33 321 22211 1222 23345667764
Q ss_pred ccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 246 TADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 246 ~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
.||+++-|.. .+.|+.+....++ ..+|+-.+-+.+ ..++ .+.|.+..+
T Consensus 310 ~~DIlvPcA~-----~n~i~~~na~~l~-ak~VvEgAN~p~-t~eA-~~iL~~~GI 357 (440)
T 3aog_A 310 PVEFLVPAAL-----EKQITEQNAWRIR-ARIVAEGANGPT-TPAA-DDILLEKGV 357 (440)
T ss_dssp CCSEEEECSS-----SSCBCTTTGGGCC-CSEEECCSSSCB-CHHH-HHHHHHHTC
T ss_pred CCcEEEecCC-----cCccchhhHHHcC-CcEEEecCcccc-CHHH-HHHHHHCCC
Confidence 7999999875 3456666666663 457778777776 3333 344444444
No 310
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.56 E-value=0.0088 Score=62.49 Aligned_cols=63 Identities=16% Similarity=0.158 Sum_probs=47.0
Q ss_pred CEEEEEeCChHHHH-HHHHHhcC-CCEEE-EECCCCcHHHHHHc-CCc-ccCHHHhccc--cCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGTE-VARRAKGL-GMNVI-AHDPYAQADRARAT-GVG-LVSFEEAIST--ADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~~-vA~~l~~~-G~~V~-~~d~~~~~~~a~~~-g~~-~~~l~ell~~--aD~V~l~~Pl 256 (595)
.+|||||+|.||+. .+..++.. ++++. ++|++... .+.+. ++. +.++++++++ .|+|++|+|.
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 75 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKEL-SKERYPQASIVRSFKELTEDPEIDLIVVNTPD 75 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCG-GGTTCTTSEEESCSHHHHTCTTCCEEEECSCG
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH-HHHhCCCCceECCHHHHhcCCCCCEEEEeCCh
Confidence 47999999999997 67777655 78876 46877543 23333 343 3489999987 9999999994
No 311
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.54 E-value=0.042 Score=57.11 Aligned_cols=90 Identities=17% Similarity=0.190 Sum_probs=61.1
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-------------------cH-HHH----HHc--CCc--cc-
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-------------------QA-DRA----RAT--GVG--LV- 238 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-------------------~~-~~a----~~~--g~~--~~- 238 (595)
.|++++|.|||+|-+|..+|+.|...|. ++..+|... .. +.+ .+. +++ ..
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~ 110 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK 110 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEe
Confidence 5899999999999999999999999886 677877632 00 111 111 121 10
Q ss_pred ---------------------CHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEecc
Q 046427 239 ---------------------SFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 239 ---------------------~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~a 282 (595)
.+.++++++|+|+.|+- +.+++.+++..-.. .+..+|+.+
T Consensus 111 ~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD-n~~tR~lin~~c~~---~~~plI~aa 171 (340)
T 3rui_A 111 LSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNI---ENKTVINAA 171 (340)
T ss_dssp CCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS-STGGGHHHHHHHHH---TTCEEEEEE
T ss_pred ccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC-CHHHHHHHHHHHHH---cCCcEEEee
Confidence 13577888999988876 55688888776553 344566654
No 312
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.53 E-value=0.012 Score=62.32 Aligned_cols=64 Identities=17% Similarity=0.159 Sum_probs=49.8
Q ss_pred CEEEEEeCCh---HHHHHHHHHhcCC-CEEEE--ECCCCc--HHHHHHcCCc----ccCHHHhccc-------cCEEEEe
Q 046427 193 KTLAVMGFGK---VGTEVARRAKGLG-MNVIA--HDPYAQ--ADRARATGVG----LVSFEEAIST-------ADFISLH 253 (595)
Q Consensus 193 ktvGIIGlG~---IG~~vA~~l~~~G-~~V~~--~d~~~~--~~~a~~~g~~----~~~l~ell~~-------aD~V~l~ 253 (595)
.+|||||+|. ||+..+..++..+ +++++ +|++.. ...+.+.|+. +.++++++++ .|+|++|
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i~ 92 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSIA 92 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEEE
T ss_pred ceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEEC
Confidence 4899999999 9999988887654 78764 688763 3345667873 3489999975 9999999
Q ss_pred CCC
Q 046427 254 MPL 256 (595)
Q Consensus 254 ~Pl 256 (595)
+|.
T Consensus 93 tp~ 95 (398)
T 3dty_A 93 TPN 95 (398)
T ss_dssp SCG
T ss_pred CCc
Confidence 994
No 313
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=95.52 E-value=0.095 Score=55.99 Aligned_cols=107 Identities=20% Similarity=0.308 Sum_probs=72.4
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEE-ECC-------CC-cHHHHHH----cC------CcccCHHHhc-cc
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIA-HDP-------YA-QADRARA----TG------VGLVSFEEAI-ST 246 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~-~d~-------~~-~~~~a~~----~g------~~~~~l~ell-~~ 246 (595)
|.++.|+||.|-|+|++|+..|+.|...|.+|++ .|. .- +.+...+ .| .+.++-++++ ..
T Consensus 216 g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~~ 295 (424)
T 3k92_A 216 GIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLEKD 295 (424)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHSC
T ss_pred CCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCccceecc
Confidence 4569999999999999999999999999999864 343 22 2222211 12 2334556665 46
Q ss_pred cCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 247 ADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 247 aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
||+++-|.. .+.|+.+....++ -.+|+-.+-+.+ ..++ .+.|.+..|
T Consensus 296 ~DIliPcA~-----~n~I~~~~a~~l~-ak~V~EgAN~p~-t~eA-~~iL~~rGI 342 (424)
T 3k92_A 296 CDILVPAAI-----SNQITAKNAHNIQ-ASIVVERANGPT-TIDA-TKILNERGV 342 (424)
T ss_dssp CSEEEECSC-----SSCBCTTTGGGCC-CSEEECCSSSCB-CHHH-HHHHHHTTC
T ss_pred ccEEeecCc-----ccccChhhHhhcC-ceEEEcCCCCCC-CHHH-HHHHHHCCC
Confidence 999988874 4667777777674 457777788876 4333 455555555
No 314
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=95.50 E-value=0.05 Score=56.35 Aligned_cols=107 Identities=20% Similarity=0.179 Sum_probs=68.2
Q ss_pred EEEEEeCChHHHHHHHHHhc---------CCCEEEE-ECCCCc------HH--HHH--HcCCcc--cCHHHhcc--ccCE
Q 046427 194 TLAVMGFGKVGTEVARRAKG---------LGMNVIA-HDPYAQ------AD--RAR--ATGVGL--VSFEEAIS--TADF 249 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~---------~G~~V~~-~d~~~~------~~--~a~--~~g~~~--~~l~ell~--~aD~ 249 (595)
+|||||+|.||+.+++.++. .+.+|.+ +|++.. .. ... ..+..+ .+++++++ +.|+
T Consensus 4 rvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iDv 83 (327)
T 3do5_A 4 KIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYDV 83 (327)
T ss_dssp EEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCSE
T ss_pred EEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCCE
Confidence 79999999999999999875 4778776 566531 11 111 112222 28999986 4899
Q ss_pred EEEeCCCChhccccccHHHHhcCCCceEEEeccCCchh-cHHHHHHHHhcCCe
Q 046427 250 ISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVV-DEEALVRALDSGII 301 (595)
Q Consensus 250 V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~v-d~~aL~~aL~~g~i 301 (595)
|+.|+|....... .-.-....|+.|.-++....+.+. ..+.|.++.++...
T Consensus 84 Vv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~ 135 (327)
T 3do5_A 84 LIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGV 135 (327)
T ss_dssp EEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTC
T ss_pred EEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCC
Confidence 9999995432212 112235557888888887666654 46677776665544
No 315
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=95.49 E-value=0.12 Score=53.31 Aligned_cols=94 Identities=18% Similarity=0.148 Sum_probs=67.6
Q ss_pred eecCCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCC---cHHH-------HHHcCCc---ccCHHHhccccCEEEEeC
Q 046427 189 SLVGKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYA---QADR-------ARATGVG---LVSFEEAISTADFISLHM 254 (595)
Q Consensus 189 ~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~---~~~~-------a~~~g~~---~~~l~ell~~aD~V~l~~ 254 (595)
.+.|++|++||= +++..+.+..+..+|++|....|.. +.+. +.+.|.. ..++++++++||+|..-.
T Consensus 154 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~ 233 (323)
T 3gd5_A 154 RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDV 233 (323)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEec
Confidence 378999999986 6888999999999999999987743 2211 1234532 248999999999998753
Q ss_pred CCCh--h----------ccccccHHHHhcCCCceEEEecc
Q 046427 255 PLTP--A----------TSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 255 Plt~--~----------t~~li~~~~l~~mk~gailiN~a 282 (595)
=... + ....++.+.++.+|++++|.-|.
T Consensus 234 wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHcl 273 (323)
T 3gd5_A 234 WTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCL 273 (323)
T ss_dssp CC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECS
T ss_pred eecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCC
Confidence 1110 0 12357888888889999888886
No 316
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=95.48 E-value=0.012 Score=61.88 Aligned_cols=63 Identities=22% Similarity=0.393 Sum_probs=46.5
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcC--C---ccc---CHHHhccccCEEEE
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATG--V---GLV---SFEEAISTADFISL 252 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g--~---~~~---~l~ell~~aD~V~l 252 (595)
.+.+|+|+|+|.|.+|+.+++.++.+|++|+++|++.... +.... . .+. .+.++++++|+|+.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p-~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCP-CRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT-TGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCh-hhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 4679999999999999999999999999999999865211 11110 0 111 26677888998854
No 317
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.48 E-value=0.031 Score=58.67 Aligned_cols=100 Identities=15% Similarity=0.146 Sum_probs=60.9
Q ss_pred CCEEEEEe-CChHHHHHHHHHhcCC-CEEEEECCCCcH--HHHHH----cC-----CcccCHHHhccccCEEEEeCCCCh
Q 046427 192 GKTLAVMG-FGKVGTEVARRAKGLG-MNVIAHDPYAQA--DRARA----TG-----VGLVSFEEAISTADFISLHMPLTP 258 (595)
Q Consensus 192 gktvGIIG-lG~IG~~vA~~l~~~G-~~V~~~d~~~~~--~~a~~----~g-----~~~~~l~ell~~aD~V~l~~Plt~ 258 (595)
..+|+|+| .|.||+.+++.|.... +++.+....... ..... .+ +...+ ++.+..+|+|++|+|...
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~~ 94 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHGT 94 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTTT
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCchh
Confidence 35899999 9999999999998765 587776433211 11111 11 11112 556678999999999533
Q ss_pred hccccccHHHHhcCCCceEEEeccCCchhc-HHHHHHHHhc
Q 046427 259 ATSKMFNDEAFFKMKKGVRIVNVARGGVVD-EEALVRALDS 298 (595)
Q Consensus 259 ~t~~li~~~~l~~mk~gailiN~arg~~vd-~~aL~~aL~~ 298 (595)
++.. .-.. +.|+.+|+.+.---.+ .+...++...
T Consensus 95 -s~~~----a~~~-~aG~~VId~sa~~R~~~~~~y~~~y~~ 129 (359)
T 1xyg_A 95 -TQEI----IKEL-PTALKIVDLSADFRLRNIAEYEEWYGQ 129 (359)
T ss_dssp -HHHH----HHTS-CTTCEEEECSSTTTCSCHHHHHHHHSS
T ss_pred -HHHH----HHHH-hCCCEEEECCccccCCchhhhhhhhcC
Confidence 3222 1223 7789999998533233 3444444443
No 318
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.48 E-value=0.0069 Score=58.92 Aligned_cols=63 Identities=14% Similarity=0.225 Sum_probs=43.7
Q ss_pred CEEEEEeCChHHHHHHHH--HhcCCCEEEE-ECCCCcHHHHHHcCCc---ccCHHHhcc-ccCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGTEVARR--AKGLGMNVIA-HDPYAQADRARATGVG---LVSFEEAIS-TADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~--l~~~G~~V~~-~d~~~~~~~a~~~g~~---~~~l~ell~-~aD~V~l~~Pl 256 (595)
++++|||.|.+|+.+++. ... |+++++ +|.++........|+. ..+++++++ +.|.|++|+|.
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps 150 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPR 150 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCH
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCc
Confidence 479999999999999995 335 888776 5655432111112322 336888886 59999999994
No 319
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.47 E-value=0.039 Score=52.24 Aligned_cols=66 Identities=17% Similarity=0.287 Sum_probs=47.8
Q ss_pred CEEEEEe-CChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCccc--CHH----HhccccCEEEEeCCCCh
Q 046427 193 KTLAVMG-FGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLV--SFE----EAISTADFISLHMPLTP 258 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~--~l~----ell~~aD~V~l~~Plt~ 258 (595)
++|.|.| .|.||+.+++.|...|++|++.++..........+++.+ |+. +.+..+|+|+.+.....
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~ 73 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISP 73 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSST
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCCc
Confidence 4689999 599999999999999999999998763322111344322 322 67888999998886543
No 320
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=95.45 E-value=0.012 Score=61.06 Aligned_cols=91 Identities=9% Similarity=0.034 Sum_probs=59.7
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC--EEEEECCCCcHHHH------HHcC------Cc-ccCHHHhccccCEEEEeCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM--NVIAHDPYAQADRA------RATG------VG-LVSFEEAISTADFISLHMP 255 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a------~~~g------~~-~~~l~ell~~aD~V~l~~P 255 (595)
..++|+|||.|.||..+|..+...|+ +|..+|........ .... +. ..+.++ +++||+|+++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 56799999999999999999987776 99999986521111 1101 11 125655 999999999875
Q ss_pred CCh---hcc-ccccH---------HHHhcCCCceEEEecc
Q 046427 256 LTP---ATS-KMFND---------EAFFKMKKGVRIVNVA 282 (595)
Q Consensus 256 lt~---~t~-~li~~---------~~l~~mk~gailiN~a 282 (595)
... +++ +++.. +.+....|++++++++
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt 138 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP 138 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence 321 111 12211 1344457899999987
No 321
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=95.44 E-value=0.024 Score=57.84 Aligned_cols=112 Identities=16% Similarity=0.095 Sum_probs=70.1
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCC--EEEEECCCCcHHH--H----H-H--c--CC--cc-cCHHHhccccCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGM--NVIAHDPYAQADR--A----R-A--T--GV--GL-VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a----~-~--~--g~--~~-~~l~ell~~aD~V~l~~Pl 256 (595)
++|+|||.|.+|.++|..+...|. +|..||....... + . . . .. .. .+ .+.+++||+|+++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 479999999999999999987776 9999998753211 1 1 1 1 11 11 25 7899999999999864
Q ss_pred Ch---hcc-ccc--cH-------HHHhcCCCceEEEeccCCchhcHHH--HHHH--HhcCCeeEEE--Ee
Q 046427 257 TP---ATS-KMF--ND-------EAFFKMKKGVRIVNVARGGVVDEEA--LVRA--LDSGIISQAA--LD 307 (595)
Q Consensus 257 t~---~t~-~li--~~-------~~l~~mk~gailiN~arg~~vd~~a--L~~a--L~~g~i~ga~--lD 307 (595)
.. .++ +++ |. +.+....|++++++++ ..+|.-. +.+. +...++.|.+ ||
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~~t~~~~k~~g~p~~rviG~gt~LD 147 (294)
T 1oju_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMTYIMWKESGKPRNEVFGMGNQLD 147 (294)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHHHHHHHHSCCCTTSEEECSHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchHHHHHHHHhcCCCHHHEeecccccH
Confidence 32 111 111 11 2345568899999997 4455332 2222 2344666653 55
No 322
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=95.44 E-value=0.13 Score=52.61 Aligned_cols=127 Identities=15% Similarity=0.074 Sum_probs=83.5
Q ss_pred HHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeec-CCEEEEEeC-ChHHHHHHHHHh
Q 046427 135 ATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLV-GKTLAVMGF-GKVGTEVARRAK 212 (595)
Q Consensus 135 a~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~-gktvGIIGl-G~IG~~vA~~l~ 212 (595)
|...+|+|.|.-+....++ .+++=++.+.++ .| .+. |++|++||= +++..+.+..+.
T Consensus 109 A~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~------------------~g-~l~~gl~va~vGD~~~va~Sl~~~~~ 167 (307)
T 3tpf_A 109 ARYSKAPVINALSELYHPT--QVLGDLFTIKEW------------------NK-MQNGIAKVAFIGDSNNMCNSWLITAA 167 (307)
T ss_dssp HHHCSSCEEEEECSSCCHH--HHHHHHHHHHHT------------------TC-CGGGCCEEEEESCSSHHHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCcCcH--HHHHHHHHHHHH------------------hC-CCCCCCEEEEEcCCCccHHHHHHHHH
Confidence 4456788999765433332 222223333331 12 377 999999996 678899999999
Q ss_pred cCCCEEEEECCCC---cHHH---H----HHcCCc---ccCHHHhccccCEEEEeC--CCCh--h--------ccccccHH
Q 046427 213 GLGMNVIAHDPYA---QADR---A----RATGVG---LVSFEEAISTADFISLHM--PLTP--A--------TSKMFNDE 267 (595)
Q Consensus 213 ~~G~~V~~~d~~~---~~~~---a----~~~g~~---~~~l~ell~~aD~V~l~~--Plt~--~--------t~~li~~~ 267 (595)
.||++|....|.. +... + ++.|.. ..++++.+++||+|..-. .... + ....++.+
T Consensus 168 ~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~~~~~~~~y~v~~e 247 (307)
T 3tpf_A 168 ILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITDTWVSMGEENEKERKIKEFEGFMIDEK 247 (307)
T ss_dssp HHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTGGGGHHHHHHHTGGGCBCHH
T ss_pred HcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecCcccCCchhhHHHHHHHhcccccCHH
Confidence 9999999988743 2221 1 144543 248999999999998754 0111 0 12446888
Q ss_pred HHhcCCCceEEEecc
Q 046427 268 AFFKMKKGVRIVNVA 282 (595)
Q Consensus 268 ~l~~mk~gailiN~a 282 (595)
.++.+|++++|.-|.
T Consensus 248 ~l~~a~~~ai~mH~l 262 (307)
T 3tpf_A 248 AMSVANKDAILLHCL 262 (307)
T ss_dssp HHHHSCTTCEEEECS
T ss_pred HHHhcCCCcEEECCC
Confidence 888889999998887
No 323
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.43 E-value=0.035 Score=57.39 Aligned_cols=91 Identities=19% Similarity=0.239 Sum_probs=59.0
Q ss_pred ecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcHH------HHHH-----cCCc--c-cCHHHhccccCEEEEeC
Q 046427 190 LVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQAD------RARA-----TGVG--L-VSFEEAISTADFISLHM 254 (595)
Q Consensus 190 l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~------~a~~-----~g~~--~-~~l~ell~~aD~V~l~~ 254 (595)
...++|+|||.|.+|..+|..+...|+ +|..||...... .... .... . .+. +.+++||+|+++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa 83 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA 83 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence 356799999999999999999987777 999999876321 1110 1222 1 244 8899999999997
Q ss_pred CCChhcccc-----c--cH-------HHHhcCCCceEEEecc
Q 046427 255 PLTPATSKM-----F--ND-------EAFFKMKKGVRIVNVA 282 (595)
Q Consensus 255 Plt~~t~~l-----i--~~-------~~l~~mk~gailiN~a 282 (595)
+. +...++ + |. +.+....|++++++++
T Consensus 84 g~-p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt 124 (324)
T 3gvi_A 84 GV-PRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT 124 (324)
T ss_dssp SC-CCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred Cc-CCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence 63 221221 1 11 1233345788888886
No 324
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=95.43 E-value=0.01 Score=61.82 Aligned_cols=63 Identities=10% Similarity=0.180 Sum_probs=46.4
Q ss_pred EEEEEeCChHHHHHHHHHhcC--------CCEEE-EECCCCc--HHHHHHcCCc--ccCHHHhcc--ccCEEEEeCCC
Q 046427 194 TLAVMGFGKVGTEVARRAKGL--------GMNVI-AHDPYAQ--ADRARATGVG--LVSFEEAIS--TADFISLHMPL 256 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~--------G~~V~-~~d~~~~--~~~a~~~g~~--~~~l~ell~--~aD~V~l~~Pl 256 (595)
+|||||+|.||+.-++.++.. +.+|. ++|++.. ...+.+.|+. +.+++++++ +.|+|++|+|.
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~ 85 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPG 85 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCG
T ss_pred cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCCh
Confidence 799999999999887776542 23655 4688763 2345667764 358999996 48999999994
No 325
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=95.42 E-value=0.024 Score=58.86 Aligned_cols=64 Identities=23% Similarity=0.367 Sum_probs=45.9
Q ss_pred EEEEEeCChHHHHHHHHHhcC-CCEEEE-ECCCCc--HHHHHHcCCc-------------------ccCHHHhccccCEE
Q 046427 194 TLAVMGFGKVGTEVARRAKGL-GMNVIA-HDPYAQ--ADRARATGVG-------------------LVSFEEAISTADFI 250 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~-G~~V~~-~d~~~~--~~~a~~~g~~-------------------~~~l~ell~~aD~V 250 (595)
+|||+|+|.||+.+++.+... ++++.+ +|+... ...++..|+. ..+.++++.++|+|
T Consensus 4 rVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDvV 83 (334)
T 2czc_A 4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDII 83 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSEE
T ss_pred EEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCEE
Confidence 799999999999999999865 577765 455432 1223333321 12688888899999
Q ss_pred EEeCCCC
Q 046427 251 SLHMPLT 257 (595)
Q Consensus 251 ~l~~Plt 257 (595)
+.|+|..
T Consensus 84 ~~aTp~~ 90 (334)
T 2czc_A 84 VDATPGG 90 (334)
T ss_dssp EECCSTT
T ss_pred EECCCcc
Confidence 9999953
No 326
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.42 E-value=0.014 Score=58.13 Aligned_cols=106 Identities=14% Similarity=0.214 Sum_probs=66.2
Q ss_pred HHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-------------------cH-HH
Q 046427 171 ADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-------------------QA-DR 229 (595)
Q Consensus 171 ~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-------------------~~-~~ 229 (595)
+.++++-..|.... -..|.+++|.|+|+|.+|+.+|+.|...|. ++..+|+.. .. +.
T Consensus 9 y~Rq~~l~~~g~~~--q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~ 86 (251)
T 1zud_1 9 YSRQILLDDIALDG--QQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQV 86 (251)
T ss_dssp THHHHTSTTTHHHH--HHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHH
T ss_pred hhhhcchhhcCHHH--HHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHH
Confidence 34444444564321 135899999999999999999999999997 788887642 00 00
Q ss_pred ----HHHc--CCc--c----c---CHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEecc
Q 046427 230 ----ARAT--GVG--L----V---SFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 230 ----a~~~--g~~--~----~---~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~a 282 (595)
..+. +++ . . +++++++++|+|+.|+. +.+++.++++..... +.-+|+++
T Consensus 87 ~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~~---~~p~i~~~ 150 (251)
T 1zud_1 87 SQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVAL---NTPLITAS 150 (251)
T ss_dssp HHHHHHHHCTTSEEEEECSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHHT---TCCEEEEE
T ss_pred HHHHHHHHCCCCEEEEEeccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHHh---CCCEEEEe
Confidence 0111 111 1 1 24567788888888877 556777777655542 33455543
No 327
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.42 E-value=0.024 Score=59.21 Aligned_cols=98 Identities=22% Similarity=0.210 Sum_probs=58.8
Q ss_pred CEEEEEe-CChHHHHHHHHHhcCC-CEEEEECCCCcH--HHHH----H---cCCcccCHHHhccccCEEEEeCCCChhcc
Q 046427 193 KTLAVMG-FGKVGTEVARRAKGLG-MNVIAHDPYAQA--DRAR----A---TGVGLVSFEEAISTADFISLHMPLTPATS 261 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~~~G-~~V~~~d~~~~~--~~a~----~---~g~~~~~l~ell~~aD~V~l~~Plt~~t~ 261 (595)
.+|||+| .|.||+.+.+.|.... +++.+....... .... - ......++++ +..+|+|++|+|... +.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~-s~ 82 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGV-FA 82 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTH-HH
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHH-HH
Confidence 4799999 7999999999998665 587765432211 1110 0 1112224444 578999999999543 33
Q ss_pred ccccHHHHhcCCCceEEEeccCCchhc-HHHHHHHH
Q 046427 262 KMFNDEAFFKMKKGVRIVNVARGGVVD-EEALVRAL 296 (595)
Q Consensus 262 ~li~~~~l~~mk~gailiN~arg~~vd-~~aL~~aL 296 (595)
.+.. ..++.|+.+|+.+----.+ .+...++.
T Consensus 83 ~~a~----~~~~aG~~VId~Sa~~r~~~~~~y~~~y 114 (345)
T 2ozp_A 83 REFD----RYSALAPVLVDLSADFRLKDPELYRRYY 114 (345)
T ss_dssp HTHH----HHHTTCSEEEECSSTTSCSCHHHHHHHH
T ss_pred HHHH----HHHHCCCEEEEcCccccCCChHHHHhhh
Confidence 3321 2246788999987533233 34333443
No 328
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=95.34 E-value=0.18 Score=51.95 Aligned_cols=127 Identities=12% Similarity=0.028 Sum_probs=79.6
Q ss_pred HHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEE-----EeCChHHHHHHH
Q 046427 135 ATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAV-----MGFGKVGTEVAR 209 (595)
Q Consensus 135 a~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGI-----IGlG~IG~~vA~ 209 (595)
|+-.+|+|.|.-+....++ .+++=++.+.++. |. ..+. .+|++ +|=+++..+.+.
T Consensus 131 A~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~---------g~--------~~l~-l~ia~a~~~~vGD~rva~Sl~~ 190 (324)
T 1js1_X 131 IQHSGRPVFSMEAATRHPL--QSFADLITIEEYK---------KT--------ARPK-VVMTWAPHPRPLPQAVPNSFAE 190 (324)
T ss_dssp HHHSSSCEEESSCSSCCHH--HHHHHHHHHHHHC---------SS--------SSCE-EEEECCCCSSCCCSHHHHHHHH
T ss_pred HhhCCCCEEECCCCCCCcH--HHHHHHHHHHHHc---------CC--------CCee-EEEEEEcccccCCcchHHHHHH
Confidence 4456799999766443333 2333334333321 10 1356 79999 999999999999
Q ss_pred HHhcCCCEEEEECCCC-cHHHHHHcCCcc-cCHHHhccccCEEEEeCCCC--h---------hccccccHHHHhcCCCce
Q 046427 210 RAKGLGMNVIAHDPYA-QADRARATGVGL-VSFEEAISTADFISLHMPLT--P---------ATSKMFNDEAFFKMKKGV 276 (595)
Q Consensus 210 ~l~~~G~~V~~~d~~~-~~~~a~~~g~~~-~~l~ell~~aD~V~l~~Plt--~---------~t~~li~~~~l~~mk~ga 276 (595)
.+..||++|....|.. ........++.. .++++++++||+|..-.=.. . .....++.+.++.+| ++
T Consensus 191 ~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~w~s~g~~~~~~~~~r~~~y~vt~e~l~~a~-~a 269 (324)
T 1js1_X 191 WMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKNWAAYTGDNYGQILSTDRNWTVGDRQMAVTN-NA 269 (324)
T ss_dssp HHHTSSSEEEEECCTTCCCCHHHHTTCEEESCHHHHHTTCSEEEECCCCCCSTTCTTCCCCCCTTSSBCHHHHTTSS-SC
T ss_pred HHHHCCCEEEEeCCcccCCChhhccceEEECCHHHHhCCCCEEEecCcccCCCccccchHHHhcCcccCHHHHHhcC-Cc
Confidence 9999999999998754 111111134543 48999999999998833210 0 012445666666666 66
Q ss_pred EEEecc
Q 046427 277 RIVNVA 282 (595)
Q Consensus 277 iliN~a 282 (595)
+|.-|.
T Consensus 270 i~MHcL 275 (324)
T 1js1_X 270 YFMHCL 275 (324)
T ss_dssp EEECCS
T ss_pred EEECCC
Confidence 666665
No 329
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.34 E-value=0.019 Score=59.46 Aligned_cols=64 Identities=20% Similarity=0.307 Sum_probs=49.0
Q ss_pred CEEEEEeCC-hHHHHHHHHHhcC--CCEEE-EECCCCcH--HHHHHcCC-c-ccCHHHhcc--ccCEEEEeCCC
Q 046427 193 KTLAVMGFG-KVGTEVARRAKGL--GMNVI-AHDPYAQA--DRARATGV-G-LVSFEEAIS--TADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG-~IG~~vA~~l~~~--G~~V~-~~d~~~~~--~~a~~~g~-~-~~~l~ell~--~aD~V~l~~Pl 256 (595)
.++||||+| .+|+..++.++.. ++++. ++|++... ..+.+.|+ . +.+++++++ +.|+|++|+|.
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 92 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPV 92 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCG
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCc
Confidence 379999999 8999999999876 57765 57887632 33455666 3 458999996 58999999984
No 330
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=95.33 E-value=0.019 Score=60.03 Aligned_cols=66 Identities=15% Similarity=0.251 Sum_probs=46.8
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHHcC----Ccc---cCHHHhccccCEEEEeCCCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARATG----VGL---VSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g----~~~---~~l~ell~~aD~V~l~~Plt 257 (595)
+.++|+|+|.|.+|+.+|+.|+. ..+|.+.|+.... +...+.. +.. .++.++++++|+|+.|+|..
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred CccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 34579999999999999999975 4688888876532 2222111 111 14778899999999999853
No 331
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.32 E-value=0.047 Score=59.48 Aligned_cols=101 Identities=19% Similarity=0.181 Sum_probs=70.3
Q ss_pred eecCCEEEEEeCCh----------HHHHHHHHHhcCCCEEEEECCCCcHHHH----HH-c-------CCcc-cCHHHhcc
Q 046427 189 SLVGKTLAVMGFGK----------VGTEVARRAKGLGMNVIAHDPYAQADRA----RA-T-------GVGL-VSFEEAIS 245 (595)
Q Consensus 189 ~l~gktvGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~a----~~-~-------g~~~-~~l~ell~ 245 (595)
.+.|++|+|+|+-- -...+++.|...|.+|.+|||......+ .. . .+.+ .++.+.++
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAAR 411 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHHHT
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHHHc
Confidence 58999999999843 6678999999999999999998753221 11 1 1233 36788999
Q ss_pred ccCEEEEeCCCChhccccccHHH-HhcCCCceEEEeccCCchhcHHHHH
Q 046427 246 TADFISLHMPLTPATSKMFNDEA-FFKMKKGVRIVNVARGGVVDEEALV 293 (595)
Q Consensus 246 ~aD~V~l~~Plt~~t~~li~~~~-l~~mk~gailiN~arg~~vd~~aL~ 293 (595)
+||.|++++. .++-+.+ +-+. .+.|+...+|+|+ |+ ++|.+.+.
T Consensus 412 ~ad~~vi~t~-~~~f~~~-~~~~~~~~~~~~~~i~D~-r~-~~~~~~~~ 456 (481)
T 2o3j_A 412 GAHAIVVLTE-WDEFVEL-NYSQIHNDMQHPAAIFDG-RL-ILDQKALR 456 (481)
T ss_dssp TCSEEEECSC-CGGGTTS-CHHHHHHHSCSSCEEEES-SS-CSCHHHHH
T ss_pred CCCEEEEcCC-cHHhhcc-CHHHHHHhcCCCCEEEEC-CC-CCCHHHHH
Confidence 9999999998 3444433 4443 3467776688886 54 34655443
No 332
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=95.32 E-value=0.018 Score=58.58 Aligned_cols=103 Identities=19% Similarity=0.275 Sum_probs=67.7
Q ss_pred CCEEEEEeC-ChHHHHHHHHHhcCCCEEE-EECCCCcHHHHHHcCCcc-cCHHHhcc--ccCEEEEeCCCChhccccccH
Q 046427 192 GKTLAVMGF-GKVGTEVARRAKGLGMNVI-AHDPYAQADRARATGVGL-VSFEEAIS--TADFISLHMPLTPATSKMFND 266 (595)
Q Consensus 192 gktvGIIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~a~~~g~~~-~~l~ell~--~aD~V~l~~Plt~~t~~li~~ 266 (595)
.++|+|+|+ |++|+.+++.++..|++++ ..+|..... ...|+.. .+++++.+ .+|++++++| .+.+...+.+
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~--~i~G~~vy~sl~el~~~~~~Dv~Ii~vp-~~~~~~~~~e 83 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGM--EVLGVPVYDTVKEAVAHHEVDASIIFVP-APAAADAALE 83 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHSCCSEEEECCC-HHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCc--eECCEEeeCCHHHHhhcCCCCEEEEecC-HHHHHHHHHH
Confidence 468999999 9999999999998899854 577754111 1246654 37999998 8999999999 3445544433
Q ss_pred HHHhcCCCceE-EEeccCCc-hhcHHHHHHHHhcCCe
Q 046427 267 EAFFKMKKGVR-IVNVARGG-VVDEEALVRALDSGII 301 (595)
Q Consensus 267 ~~l~~mk~gai-liN~arg~-~vd~~aL~~aL~~g~i 301 (595)
. .+ .|.- +|..+.|= ..+++.+.++.++..+
T Consensus 84 a-~~---~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi 116 (288)
T 1oi7_A 84 A-AH---AGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 (288)
T ss_dssp H-HH---TTCSEEEECCSCCCHHHHHHHHHHHHHHTC
T ss_pred H-HH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 2 22 2322 44455442 2245577777766544
No 333
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=95.30 E-value=0.12 Score=52.80 Aligned_cols=65 Identities=12% Similarity=0.209 Sum_probs=51.7
Q ss_pred eecCCEEEEEeC---ChHHHHHHHHHhcC-CCEEEEECCCC---cH---HHHHHcCCcc---cCHHHhccccCEEEEe
Q 046427 189 SLVGKTLAVMGF---GKVGTEVARRAKGL-GMNVIAHDPYA---QA---DRARATGVGL---VSFEEAISTADFISLH 253 (595)
Q Consensus 189 ~l~gktvGIIGl---G~IG~~vA~~l~~~-G~~V~~~d~~~---~~---~~a~~~g~~~---~~l~ell~~aD~V~l~ 253 (595)
.+.|.+|++||= |++..+++..+..| |++|....|.. +. +.+++.|... .++++++++||+|..-
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~ 225 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVT 225 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEEC
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeC
Confidence 378999999998 58999999999999 99999988742 22 2234556543 4899999999999874
No 334
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.30 E-value=0.022 Score=58.43 Aligned_cols=64 Identities=19% Similarity=0.266 Sum_probs=47.2
Q ss_pred CEEEEEeC-ChHHHHHHHHHhcCCCEEEE-ECCCCcHHHH-HHc-CCc-ccCHHHhc----------cccCEEEEeCCC
Q 046427 193 KTLAVMGF-GKVGTEVARRAKGLGMNVIA-HDPYAQADRA-RAT-GVG-LVSFEEAI----------STADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGl-G~IG~~vA~~l~~~G~~V~~-~d~~~~~~~a-~~~-g~~-~~~l~ell----------~~aD~V~l~~Pl 256 (595)
.++||||+ |.||+..++.++..+.++.+ +|++.....+ ... +.. +.++++++ .+.|+|++|+|.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~ 82 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPN 82 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCG
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCc
Confidence 48999999 78999999999988888664 7877643222 222 233 34788887 679999999983
No 335
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.29 E-value=0.043 Score=55.23 Aligned_cols=96 Identities=17% Similarity=0.273 Sum_probs=60.8
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcHH--HHHHcC-----CcccCHHHhccccCEEEEeCCCCh
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQAD--RARATG-----VGLVSFEEAISTADFISLHMPLTP 258 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~--~a~~~g-----~~~~~l~ell~~aD~V~l~~Plt~ 258 (595)
+.++.|+++.|+|.|-.+++++..|...|. +|..++|..... .++..+ .......+.++++|+|+-++|.--
T Consensus 120 g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm 199 (269)
T 3tum_A 120 GFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGM 199 (269)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTC
T ss_pred CCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCcccc
Confidence 346789999999999999999999998885 899999875321 122111 111123344677899999888532
Q ss_pred h--ccccccHHHHhcCCCceEEEecc
Q 046427 259 A--TSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 259 ~--t~~li~~~~l~~mk~gailiN~a 282 (595)
. ...-++...++.++++.++.|+-
T Consensus 200 ~~~~~~p~~~~~~~~l~~~~~v~D~v 225 (269)
T 3tum_A 200 GTRAELPLSAALLATLQPDTLVADVV 225 (269)
T ss_dssp STTCCCSSCHHHHHTCCTTSEEEECC
T ss_pred CCCCCCCCChHHHhccCCCcEEEEEc
Confidence 1 11123444455555555555543
No 336
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.27 E-value=0.016 Score=61.16 Aligned_cols=63 Identities=16% Similarity=0.198 Sum_probs=49.9
Q ss_pred CEEEEEeCChHHHHHHHHHhcC--CCEEEE-ECCCCc--HHHHHHcCCcc-cCHHHhccccCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL--GMNVIA-HDPYAQ--ADRARATGVGL-VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~--G~~V~~-~d~~~~--~~~a~~~g~~~-~~l~ell~~aD~V~l~~Pl 256 (595)
.+|||||.| +|+.-++.++.. ++++.+ +|++.. ...+++.|+.. .++++++.+.|++++++|.
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~ 76 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRS 76 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC-
T ss_pred CEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCC
Confidence 479999999 799888877765 678775 688763 35567788864 4899999999999999984
No 337
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=95.23 E-value=0.019 Score=61.34 Aligned_cols=65 Identities=17% Similarity=0.249 Sum_probs=49.1
Q ss_pred CEEEEEeCCh---HHHHHHHHHhcCC-CEEE--EECCCCc--HHHHHHcCCc----ccCHHHhccc-------cCEEEEe
Q 046427 193 KTLAVMGFGK---VGTEVARRAKGLG-MNVI--AHDPYAQ--ADRARATGVG----LVSFEEAIST-------ADFISLH 253 (595)
Q Consensus 193 ktvGIIGlG~---IG~~vA~~l~~~G-~~V~--~~d~~~~--~~~a~~~g~~----~~~l~ell~~-------aD~V~l~ 253 (595)
.+|||||+|. ||+..+..++..+ ++++ ++|++.. ...+++.|+. +.++++++++ .|+|++|
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I~ 117 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAIV 117 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEEC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEEC
Confidence 4899999999 9999888877655 6776 4688763 3345667773 3489999986 9999999
Q ss_pred CCCC
Q 046427 254 MPLT 257 (595)
Q Consensus 254 ~Plt 257 (595)
+|..
T Consensus 118 tp~~ 121 (417)
T 3v5n_A 118 TPNH 121 (417)
T ss_dssp SCTT
T ss_pred CCcH
Confidence 9943
No 338
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.23 E-value=0.03 Score=58.69 Aligned_cols=88 Identities=23% Similarity=0.327 Sum_probs=64.2
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc----C---HHHhccccCEEEEeCCCChhccc
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV----S---FEEAISTADFISLHMPLTPATSK 262 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~----~---l~ell~~aD~V~l~~Plt~~t~~ 262 (595)
.|.+|.|+|.|.+|...++.++.+|.+|++.++.. ..+.++++|...+ + ++++....|+|+-++.... +
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~-~-- 270 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPH-N-- 270 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCC-C--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHH-H--
Confidence 47899999999999999999999999999998765 4566677786421 1 2233356788888876321 1
Q ss_pred cccHHHHhcCCCceEEEeccC
Q 046427 263 MFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 263 li~~~~l~~mk~gailiN~ar 283 (595)
-...++.|+++..++.++.
T Consensus 271 --~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 271 --LDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp --HHHHHTTEEEEEEEEECCC
T ss_pred --HHHHHHHhccCCEEEEecc
Confidence 1345667888888888764
No 339
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.22 E-value=0.02 Score=59.95 Aligned_cols=86 Identities=17% Similarity=0.103 Sum_probs=52.9
Q ss_pred CEEEEEe-CChHHHHHHHHHhcCC-CEEEEE--CCCCc-HHHHHHcC---------------CcccCHHHhcc-ccCEEE
Q 046427 193 KTLAVMG-FGKVGTEVARRAKGLG-MNVIAH--DPYAQ-ADRARATG---------------VGLVSFEEAIS-TADFIS 251 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~~~G-~~V~~~--d~~~~-~~~a~~~g---------------~~~~~l~ell~-~aD~V~ 251 (595)
.+|||+| .|.||+.+++.|.... ++|.+. ++... .......+ +...+++++++ ++|+|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~ 88 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVF 88 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEEE
Confidence 4899999 9999999999998664 687665 33221 11111111 11124556657 899999
Q ss_pred EeCCCChhccccccHHHHhcCCCceEEEeccC
Q 046427 252 LHMPLTPATSKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 252 l~~Plt~~t~~li~~~~l~~mk~gailiN~ar 283 (595)
+|+|.. .+..+.. ..++.|+.+|+.+-
T Consensus 89 ~atp~~-~~~~~a~----~~~~aG~~VId~s~ 115 (354)
T 1ys4_A 89 SALPSD-LAKKFEP----EFAKEGKLIFSNAS 115 (354)
T ss_dssp ECCCHH-HHHHHHH----HHHHTTCEEEECCS
T ss_pred ECCCch-HHHHHHH----HHHHCCCEEEECCc
Confidence 999842 2332221 12356788888764
No 340
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.20 E-value=0.023 Score=58.40 Aligned_cols=64 Identities=20% Similarity=0.315 Sum_probs=46.9
Q ss_pred CEEEEEeC-ChHHHHHHHHHhcCCCEEEE-ECCCCcHHH-HHHc-CCc-ccCHHHhc-----------cccCEEEEeCCC
Q 046427 193 KTLAVMGF-GKVGTEVARRAKGLGMNVIA-HDPYAQADR-ARAT-GVG-LVSFEEAI-----------STADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGl-G~IG~~vA~~l~~~G~~V~~-~d~~~~~~~-a~~~-g~~-~~~l~ell-----------~~aD~V~l~~Pl 256 (595)
.++||||+ |.||+..++.++..+.++++ +|++..... +... +.. +.++++++ .+.|+|++|+|.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPN 83 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCG
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCc
Confidence 48999999 79999999999988888665 687764322 2222 233 34788887 578999999983
No 341
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.19 E-value=0.075 Score=55.46 Aligned_cols=87 Identities=25% Similarity=0.264 Sum_probs=60.3
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-cHHHHHHcCCccc--------CHHHhcc-----ccCEEEEeCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-QADRARATGVGLV--------SFEEAIS-----TADFISLHMP 255 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~--------~l~ell~-----~aD~V~l~~P 255 (595)
.|++|.|+|.|.+|...++.++.+|. +|++.++.. ..+.++++|...+ ++.+.+. ..|+|+-++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 47899999999999999999999999 899998766 4566677776321 1322222 3677777765
Q ss_pred CChhccccccHHHHhcCCCc-eEEEecc
Q 046427 256 LTPATSKMFNDEAFFKMKKG-VRIVNVA 282 (595)
Q Consensus 256 lt~~t~~li~~~~l~~mk~g-ailiN~a 282 (595)
..+ + -...+..++++ ..++.++
T Consensus 272 ~~~-~----~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 272 NVG-V----MRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp CHH-H----HHHHHHTBCTTTCEEEECS
T ss_pred CHH-H----HHHHHHHhhcCCcEEEEEc
Confidence 311 1 13445667777 7777665
No 342
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=95.19 E-value=0.024 Score=57.74 Aligned_cols=54 Identities=11% Similarity=0.027 Sum_probs=44.5
Q ss_pred cCccEEEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEEcCCC
Q 046427 519 LEGSIILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIGVDEE 572 (595)
Q Consensus 519 ~~~~~Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~~d~~ 572 (595)
.....|.+..+|+||+|+.|++.|.++|+||..++-......+.-.|.++++.+
T Consensus 8 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~ 61 (292)
T 3lou_A 8 PHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHAT 61 (292)
T ss_dssp CCEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred CCcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEcc
Confidence 344677888999999999999999999999999998755566677788776544
No 343
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.17 E-value=0.073 Score=55.53 Aligned_cols=87 Identities=26% Similarity=0.269 Sum_probs=58.1
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-cHHHHHHcCCcc-cC-------HHHhcc-----ccCEEEEeCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-QADRARATGVGL-VS-------FEEAIS-----TADFISLHMP 255 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~-~~-------l~ell~-----~aD~V~l~~P 255 (595)
.|++|.|+|.|.+|...++.++.+|. +|++.++.. ..+.++++|... ++ +.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 47899999999999999999999999 899999766 445667777632 11 222222 3677776665
Q ss_pred CChhccccccHHHHhcCCCc-eEEEecc
Q 046427 256 LTPATSKMFNDEAFFKMKKG-VRIVNVA 282 (595)
Q Consensus 256 lt~~t~~li~~~~l~~mk~g-ailiN~a 282 (595)
..+ + -...++.++++ ..++.++
T Consensus 271 ~~~-~----~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 271 RLD-T----MVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp CHH-H----HHHHHHHBCTTTCEEEECS
T ss_pred CHH-H----HHHHHHHhhcCCcEEEEec
Confidence 211 1 13345556666 6666664
No 344
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=95.16 E-value=0.022 Score=58.44 Aligned_cols=107 Identities=21% Similarity=0.226 Sum_probs=71.9
Q ss_pred eecCCEEEEE-eC-ChHHHHHHHHHhcCCCEEE-EECCCCcHHHHHHcCCccc-CHHHhcc--ccCEEEEeCCCChhccc
Q 046427 189 SLVGKTLAVM-GF-GKVGTEVARRAKGLGMNVI-AHDPYAQADRARATGVGLV-SFEEAIS--TADFISLHMPLTPATSK 262 (595)
Q Consensus 189 ~l~gktvGII-Gl-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~a~~~g~~~~-~l~ell~--~aD~V~l~~Plt~~t~~ 262 (595)
-+..+++.|| |+ |+.|+.+++.++..|++++ ..||..... .-.|+... +++|+.+ ..|++++++|. +....
T Consensus 10 l~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~--~i~G~~vy~sl~el~~~~~vD~avI~vP~-~~~~~ 86 (305)
T 2fp4_A 10 YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGK--THLGLPVFNTVKEAKEQTGATASVIYVPP-PFAAA 86 (305)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHHCCCEEEECCCH-HHHHH
T ss_pred HhCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcc--eECCeeeechHHHhhhcCCCCEEEEecCH-HHHHH
Confidence 4667889999 99 9999999999999999854 567753111 12466544 7999998 89999999993 44444
Q ss_pred cccHHHHhcCCCceEEEeccCCch-hcHHHHHHHHhcC-Ce
Q 046427 263 MFNDEAFFKMKKGVRIVNVARGGV-VDEEALVRALDSG-II 301 (595)
Q Consensus 263 li~~~~l~~mk~gailiN~arg~~-vd~~aL~~aL~~g-~i 301 (595)
.+.+. .+ ..- ..+++.+-|-- -++..+.+..++. .+
T Consensus 87 ~~~e~-i~-~Gi-~~iv~~t~G~~~~~~~~l~~~a~~~~gi 124 (305)
T 2fp4_A 87 AINEA-ID-AEV-PLVVCITEGIPQQDMVRVKHRLLRQGKT 124 (305)
T ss_dssp HHHHH-HH-TTC-SEEEECCCCCCHHHHHHHHHHHTTCSSC
T ss_pred HHHHH-HH-CCC-CEEEEECCCCChHHHHHHHHHHHhcCCc
Confidence 44332 22 121 23456666532 2455788888776 54
No 345
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.12 E-value=0.035 Score=57.17 Aligned_cols=108 Identities=17% Similarity=0.154 Sum_probs=67.9
Q ss_pred CCEEEEEeCChHHHH-HHHHHhcCCCEEEEECCCCc---HHHHHHcCCccc---CHHHhc-cccCEEEEeC--CC-Chhc
Q 046427 192 GKTLAVMGFGKVGTE-VARRAKGLGMNVIAHDPYAQ---ADRARATGVGLV---SFEEAI-STADFISLHM--PL-TPAT 260 (595)
Q Consensus 192 gktvGIIGlG~IG~~-vA~~l~~~G~~V~~~d~~~~---~~~a~~~g~~~~---~l~ell-~~aD~V~l~~--Pl-t~~t 260 (595)
.|+|.|||+|.+|.+ +|+.|+..|++|.++|.... .+...+.|+... +.+++. .++|+|++.- |. +|+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHH
Confidence 478999999999996 99999999999999997642 233456687543 445555 5899999853 32 2221
Q ss_pred c-------ccccHHH-Hhc--CCCc-eEEEeccCCchhcHHHHHHHHhcC
Q 046427 261 S-------KMFNDEA-FFK--MKKG-VRIVNVARGGVVDEEALVRALDSG 299 (595)
Q Consensus 261 ~-------~li~~~~-l~~--mk~g-ailiN~arg~~vd~~aL~~aL~~g 299 (595)
. .++.+.+ +.. ++.. .+-|-=+.|+.-...-+...|+..
T Consensus 84 ~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~ 133 (326)
T 3eag_A 84 EAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYA 133 (326)
T ss_dssp HHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHc
Confidence 1 1333322 332 3322 344444468775566566666653
No 346
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.09 E-value=0.03 Score=57.72 Aligned_cols=88 Identities=24% Similarity=0.339 Sum_probs=60.6
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc------CHHHhc----cccCEEEEeCCCChh
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV------SFEEAI----STADFISLHMPLTPA 259 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~------~l~ell----~~aD~V~l~~Plt~~ 259 (595)
.|++|.|+|.|.||...++.++.+|.+|++.+++. ..+.++++|...+ ++.+.+ ...|+|+-++...+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~- 242 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKP- 242 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHH-
Confidence 47899999999999999999999999999999865 3455666775321 222221 35777777765322
Q ss_pred ccccccHHHHhcCCCceEEEeccC
Q 046427 260 TSKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 260 t~~li~~~~l~~mk~gailiN~ar 283 (595)
+ -...+..|+++..++.++.
T Consensus 243 ~----~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 243 A----FQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp H----HHHHHHHEEEEEEEEECCC
T ss_pred H----HHHHHHHhhcCCEEEEecc
Confidence 1 1344566777777777764
No 347
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=95.07 E-value=0.22 Score=51.90 Aligned_cols=139 Identities=17% Similarity=0.160 Sum_probs=82.1
Q ss_pred hhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCccc---ccccceeeecCCEEEEEeCC-hHHHHHH
Q 046427 133 SAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQ---RNKYVGVSLVGKTLAVMGFG-KVGTEVA 208 (595)
Q Consensus 133 ~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~---~~~~~g~~l~gktvGIIGlG-~IG~~vA 208 (595)
+.|...+|+|.|.-+....++ .+++=++.+.+++ |.+. ........|.|.+|++||=+ ++..+++
T Consensus 137 ~lA~~s~vPVINag~d~~HPt--QaLaDl~TI~E~~---------G~~~~~~~~~~~~~~l~glkva~vGD~~nva~Sl~ 205 (353)
T 3sds_A 137 NLAKHSSVPVINALCDTFHPL--QAIADFLTIHESF---------ASQSATHGTHPSSLGLEGLKIAWVGDANNVLFDLA 205 (353)
T ss_dssp HHHHHCSSCEEEEECSSCCHH--HHHHHHHHHHHHT---------C--------CTTCCSCTTCEEEEESCCCHHHHHHH
T ss_pred HHHhhCCCCEEECCCCCCCcH--HHHHHHHHHHHHh---------CCCcccccccccccccCCCEEEEECCCchHHHHHH
Confidence 334557899999854332222 2233333333322 2210 00112334899999999975 6888888
Q ss_pred HHHhcCCCEEEEECCCC---cHH---HHHH------cC--Cc-ccCHHHhccccCEEEEeC--CCChh----------cc
Q 046427 209 RRAKGLGMNVIAHDPYA---QAD---RARA------TG--VG-LVSFEEAISTADFISLHM--PLTPA----------TS 261 (595)
Q Consensus 209 ~~l~~~G~~V~~~d~~~---~~~---~a~~------~g--~~-~~~l~ell~~aD~V~l~~--Plt~~----------t~ 261 (595)
..+..||++|....|.. +.+ .+++ .| +. ..+++|++++||+|..-+ +...+ ..
T Consensus 206 ~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvytd~w~smg~E~~~~~r~~~~~~ 285 (353)
T 3sds_A 206 IAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIVTDTWISMGQETEKIKRLEAFKD 285 (353)
T ss_dssp HHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEEECCC--------CHHHHHHTTT
T ss_pred HHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEEeCCccCCchhhHHHHHHHHhhC
Confidence 88899999999988743 222 1122 13 22 248999999999998743 22111 11
Q ss_pred ccccHHHHhc--CCCceEEEecc
Q 046427 262 KMFNDEAFFK--MKKGVRIVNVA 282 (595)
Q Consensus 262 ~li~~~~l~~--mk~gailiN~a 282 (595)
..++.+.++. +|++++|.-|.
T Consensus 286 y~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 286 FKVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp CCBCHHHHHHHTCCTTCEEEECS
T ss_pred ceecHHHHhhcccCCCcEEECCC
Confidence 3467777776 77888877775
No 348
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.02 E-value=0.048 Score=57.69 Aligned_cols=90 Identities=20% Similarity=0.227 Sum_probs=60.5
Q ss_pred ecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-cHHHHHHcCCccc------CHHH----hcc--ccCEEEEeCC
Q 046427 190 LVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-QADRARATGVGLV------SFEE----AIS--TADFISLHMP 255 (595)
Q Consensus 190 l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~------~l~e----ll~--~aD~V~l~~P 255 (595)
-.|.+|.|+|.|.+|...++.++.+|. +|++.|... ..+.++++|...+ ++.+ +.. ..|+|+-++.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCC
Confidence 357899999999999999999999999 999999766 4466777776421 2222 221 4788877776
Q ss_pred CChhccccccHHHHhcC----CCceEEEeccC
Q 046427 256 LTPATSKMFNDEAFFKM----KKGVRIVNVAR 283 (595)
Q Consensus 256 lt~~t~~li~~~~l~~m----k~gailiN~ar 283 (595)
....+. ...+..+ +++..++.++-
T Consensus 292 ~~~~~~----~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 292 VPQLVW----PQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CHHHHH----HHHHHHHHHCSCCCCEEEECSC
T ss_pred CcHHHH----HHHHHHHHhccCCCcEEEEeCC
Confidence 321121 1222333 77777777763
No 349
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.02 E-value=0.088 Score=54.94 Aligned_cols=87 Identities=25% Similarity=0.208 Sum_probs=58.6
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-cHHHHHHcCCccc-C-------HHHhcc-----ccCEEEEeCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-QADRARATGVGLV-S-------FEEAIS-----TADFISLHMP 255 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~-~-------l~ell~-----~aD~V~l~~P 255 (595)
.|++|.|+|.|.+|...++.++.+|. +|++.++.. ..+.++++|+..+ + +.+.+. ..|+|+-++.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 47899999999999999999999999 899998766 4466677776421 1 222221 3677776665
Q ss_pred CChhccccccHHHHhcCCCc-eEEEecc
Q 046427 256 LTPATSKMFNDEAFFKMKKG-VRIVNVA 282 (595)
Q Consensus 256 lt~~t~~li~~~~l~~mk~g-ailiN~a 282 (595)
. +++ -...++.++++ ..++.++
T Consensus 275 ~-~~~----~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 275 T-AQT----LKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp C-HHH----HHHHHHTBCTTTCEEEECC
T ss_pred C-HHH----HHHHHHHhhcCCCEEEEEC
Confidence 2 111 13345566766 6666664
No 350
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.01 E-value=0.017 Score=59.83 Aligned_cols=87 Identities=18% Similarity=0.249 Sum_probs=56.2
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-cHHHHHHcCCccc------CHHHhcc------ccCEEEEeCCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-QADRARATGVGLV------SFEEAIS------TADFISLHMPL 256 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~------~l~ell~------~aD~V~l~~Pl 256 (595)
.|++|.|+|.|.||...++.++.+|. +|++.++.. ..+.++++|...+ ++.+.+. ..|+|+-+++.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 68899999999999999999999999 999999865 3345566665321 2222111 35666666652
Q ss_pred ChhccccccHHHHhcCCCceEEEecc
Q 046427 257 TPATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 257 t~~t~~li~~~~l~~mk~gailiN~a 282 (595)
.+ + -...+..|+++..++.++
T Consensus 247 ~~-~----~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 247 PK-A----LEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp HH-H----HHHHHHHEEEEEEEEECC
T ss_pred HH-H----HHHHHHHHhcCCEEEEEc
Confidence 11 1 123344556666666654
No 351
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.00 E-value=0.036 Score=51.78 Aligned_cols=66 Identities=14% Similarity=0.172 Sum_probs=47.8
Q ss_pred CCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCCcHHHH-HHcCCcc--------cCHHHhccccCEEEEeCCCC
Q 046427 192 GKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYAQADRA-RATGVGL--------VSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 192 gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a-~~~g~~~--------~~l~ell~~aD~V~l~~Plt 257 (595)
++++.|.|. |.||+.+++.|...|.+|++.++....... ...++.. .++.++++.+|+|+.+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~ 78 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence 478999998 999999999999999999999886532110 0123321 13567788899998887643
No 352
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.99 E-value=0.08 Score=55.21 Aligned_cols=87 Identities=23% Similarity=0.185 Sum_probs=60.2
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-cHHHHHHcCCccc--------CHHHhcc-----ccCEEEEeCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-QADRARATGVGLV--------SFEEAIS-----TADFISLHMP 255 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~--------~l~ell~-----~aD~V~l~~P 255 (595)
.|++|.|+|.|.||...++.++.+|. +|++.++.. ..+.++++|+..+ ++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 47899999999999999999999998 899998766 4566777776421 1222222 4677777765
Q ss_pred CChhccccccHHHHhcCCCc-eEEEecc
Q 046427 256 LTPATSKMFNDEAFFKMKKG-VRIVNVA 282 (595)
Q Consensus 256 lt~~t~~li~~~~l~~mk~g-ailiN~a 282 (595)
. +++ -...++.++++ ..++.++
T Consensus 271 ~-~~~----~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 271 R-IET----MMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp C-HHH----HHHHHHTBCTTTCEEEECC
T ss_pred C-HHH----HHHHHHHHhcCCCEEEEEc
Confidence 2 111 13445667777 7777665
No 353
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=94.96 E-value=0.027 Score=60.24 Aligned_cols=95 Identities=21% Similarity=0.229 Sum_probs=58.6
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEE-ECCCC-------------cHH---HH-HHcC-------CcccCHH
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIA-HDPYA-------------QAD---RA-RATG-------VGLVSFE 241 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~-~d~~~-------------~~~---~a-~~~g-------~~~~~l~ 241 (595)
|.++.|++|.|.|+|++|+.+|+.|...|.+|++ .|.+. +.+ .. .+.| .+.++.+
T Consensus 207 g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~~ 286 (421)
T 2yfq_A 207 GIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDE 286 (421)
T ss_dssp TCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCcc
Confidence 4468999999999999999999999999999994 34441 111 11 1112 1233334
Q ss_pred Hhcc-ccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchh
Q 046427 242 EAIS-TADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVV 287 (595)
Q Consensus 242 ell~-~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~v 287 (595)
+++. .||+++-|.+ .+.|+.+....+ ...+|+-.+-+.+-
T Consensus 287 ~~~~~~~DIliP~A~-----~n~i~~~~A~~l-~ak~VvEgAN~P~t 327 (421)
T 2yfq_A 287 EFWTKEYDIIVPAAL-----ENVITGERAKTI-NAKLVCEAANGPTT 327 (421)
T ss_dssp --------CEEECSC-----SSCSCHHHHTTC-CCSEEECCSSSCSC
T ss_pred chhcCCccEEEEcCC-----cCcCCcccHHHc-CCeEEEeCCccccC
Confidence 5443 6899988864 456777777777 35677888888764
No 354
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=94.95 E-value=0.15 Score=54.44 Aligned_cols=107 Identities=25% Similarity=0.296 Sum_probs=69.8
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhc-CCCEEEE--------ECCCC-cHHH---H-HHcC-------CcccCHHHhcc
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKG-LGMNVIA--------HDPYA-QADR---A-RATG-------VGLVSFEEAIS 245 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~-~G~~V~~--------~d~~~-~~~~---a-~~~g-------~~~~~l~ell~ 245 (595)
|.++.|+++.|.|+|++|+..|+.|.. .|.+|++ |||.- ..+. . .+.+ .+..+.++++.
T Consensus 204 g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~ 283 (415)
T 2tmg_A 204 GIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLE 283 (415)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHTT
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhhc
Confidence 457999999999999999999999998 9999984 33321 2211 1 1112 13335566664
Q ss_pred -ccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 246 -TADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 246 -~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
.||+++-|.. .+.|+.+....++ ..+|+-.+-+.+ ..++ .+.|.+..+
T Consensus 284 ~~~DIliP~A~-----~n~i~~~~a~~l~-ak~V~EgAN~p~-t~~a-~~~l~~~Gi 332 (415)
T 2tmg_A 284 LDVDILVPAAL-----EGAIHAGNAERIK-AKAVVEGANGPT-TPEA-DEILSRRGI 332 (415)
T ss_dssp CSCSEEEECSS-----TTSBCHHHHTTCC-CSEEECCSSSCB-CHHH-HHHHHHTTC
T ss_pred CCCcEEEecCC-----cCccCcccHHHcC-CeEEEeCCCccc-CHHH-HHHHHHCCC
Confidence 7999988875 3456777777673 457777777775 3333 233444444
No 355
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=94.95 E-value=0.017 Score=58.64 Aligned_cols=61 Identities=21% Similarity=0.249 Sum_probs=46.1
Q ss_pred CEEEEEeCChHHHHHHHHHhc----CCCEEEE-ECCCCcHHHHHHcCCcccCHHHhcc--ccCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKG----LGMNVIA-HDPYAQADRARATGVGLVSFEEAIS--TADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~----~G~~V~~-~d~~~~~~~a~~~g~~~~~l~ell~--~aD~V~l~~Pl 256 (595)
.+|||||+|.||+..++.+.. -++++.+ +|+... +...|+...+++++++ +.|+|++|+|.
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~---a~~~g~~~~~~~ell~~~~vD~V~i~tp~ 75 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL---GSLDEVRQISLEDALRSQEIDVAYICSES 75 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC---CEETTEEBCCHHHHHHCSSEEEEEECSCG
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH---HHHcCCCCCCHHHHhcCCCCCEEEEeCCc
Confidence 379999999999999988875 3577664 676431 2234555568999997 68999999994
No 356
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=94.93 E-value=0.026 Score=58.20 Aligned_cols=58 Identities=24% Similarity=0.381 Sum_probs=45.6
Q ss_pred CEEEEEeCChHHH-HHHHHHhcC-CCEEEE-ECCCCcHHHHHHcCCc-ccCHHHhccc---cCEEEEeCC
Q 046427 193 KTLAVMGFGKVGT-EVARRAKGL-GMNVIA-HDPYAQADRARATGVG-LVSFEEAIST---ADFISLHMP 255 (595)
Q Consensus 193 ktvGIIGlG~IG~-~vA~~l~~~-G~~V~~-~d~~~~~~~a~~~g~~-~~~l~ell~~---aD~V~l~~P 255 (595)
.+|||||+|.||+ ..++.++.. +++|.+ +|++.. ..|+. +.++++++++ .|+|++|+|
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~-----~~g~~~~~~~~~ll~~~~~vD~V~i~tp 90 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGT-----VEGVNSYTTIEAMLDAEPSIDAVSLCMP 90 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCC-----CTTSEEESSHHHHHHHCTTCCEEEECSC
T ss_pred ceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChh-----hcCCCccCCHHHHHhCCCCCCEEEEeCC
Confidence 4899999999998 688888865 678665 677643 23554 3489999876 899999999
No 357
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=94.92 E-value=0.035 Score=59.72 Aligned_cols=64 Identities=14% Similarity=0.263 Sum_probs=47.5
Q ss_pred CEEEEEeCChHHHHHHHHHhcC-CCEEE-EECCCCcH-HH-HH---HcCC---c-cc----CHHHhcc--ccCEEEEeCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL-GMNVI-AHDPYAQA-DR-AR---ATGV---G-LV----SFEEAIS--TADFISLHMP 255 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~-~~-a~---~~g~---~-~~----~l~ell~--~aD~V~l~~P 255 (595)
.+|||||+|.||+..++.++.. ++++. ++|++... +. +. +.|+ . +. +++++++ +.|+|++|+|
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 100 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSSP 100 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECCC
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcCC
Confidence 4899999999999999988875 67865 57887532 22 11 2352 3 34 8999997 5899999999
Q ss_pred C
Q 046427 256 L 256 (595)
Q Consensus 256 l 256 (595)
.
T Consensus 101 ~ 101 (444)
T 2ixa_A 101 W 101 (444)
T ss_dssp G
T ss_pred c
Confidence 4
No 358
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.89 E-value=0.06 Score=55.31 Aligned_cols=96 Identities=17% Similarity=0.163 Sum_probs=61.2
Q ss_pred CEEEEEeC-ChHHHHHHHHHhcCC--CEEEEECCCCcHHHHHHc--C-----Ccc----cCHHHhccccCEEEEeCCCCh
Q 046427 193 KTLAVMGF-GKVGTEVARRAKGLG--MNVIAHDPYAQADRARAT--G-----VGL----VSFEEAISTADFISLHMPLTP 258 (595)
Q Consensus 193 ktvGIIGl-G~IG~~vA~~l~~~G--~~V~~~d~~~~~~~a~~~--g-----~~~----~~l~ell~~aD~V~l~~Plt~ 258 (595)
.+|+|+|. |.+|..++..|...| .+|..+|.......+.++ . +.. .++++.+++||+|+++.....
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~ 80 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR 80 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCC
Confidence 37999998 999999999998777 689999987622222222 1 111 257788999999999986432
Q ss_pred ---hcc-ccc--cH-------HHHhcCCCceEEEeccCCchhcHH
Q 046427 259 ---ATS-KMF--ND-------EAFFKMKKGVRIVNVARGGVVDEE 290 (595)
Q Consensus 259 ---~t~-~li--~~-------~~l~~mk~gailiN~arg~~vd~~ 290 (595)
+++ .++ |. +.+....|++++++++ ..+|.-
T Consensus 81 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s--NPv~~~ 123 (314)
T 1mld_A 81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS--NPVNST 123 (314)
T ss_dssp CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC--CCcchh
Confidence 111 110 11 1223345788999973 345543
No 359
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=94.89 E-value=0.012 Score=57.09 Aligned_cols=64 Identities=13% Similarity=0.243 Sum_probs=44.6
Q ss_pred CEEEEEeCChHHHHHHHHH--hcCCCEEEE-ECCCCc-HHHH-HHcCCcc---cCHHHhccc--cCEEEEeCCC
Q 046427 193 KTLAVMGFGKVGTEVARRA--KGLGMNVIA-HDPYAQ-ADRA-RATGVGL---VSFEEAIST--ADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l--~~~G~~V~~-~d~~~~-~~~a-~~~g~~~---~~l~ell~~--aD~V~l~~Pl 256 (595)
++++|+|.|++|+.+++.+ ...|+++.+ +|.++. ..-. .-.|+.. .++++++++ .|.+++|+|.
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs 158 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPS 158 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCG
T ss_pred CEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCc
Confidence 4799999999999999973 456889876 566543 2111 1235543 367788874 9999999994
No 360
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=94.87 E-value=0.057 Score=58.80 Aligned_cols=113 Identities=17% Similarity=0.163 Sum_probs=70.6
Q ss_pred CCEEEEEeCChHH--HHHHHHHh---cC-CCEEEEECCCCcH-HH----HH----HcCC----cc-cCHHHhccccCEEE
Q 046427 192 GKTLAVMGFGKVG--TEVARRAK---GL-GMNVIAHDPYAQA-DR----AR----ATGV----GL-VSFEEAISTADFIS 251 (595)
Q Consensus 192 gktvGIIGlG~IG--~~vA~~l~---~~-G~~V~~~d~~~~~-~~----a~----~~g~----~~-~~l~ell~~aD~V~ 251 (595)
.++|+|||.|.+| .++|..+. ++ |.+|..||..... +. .. ..+. .. .++++.+++||+|+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 4689999999974 55566654 33 8899999987521 11 11 1111 12 26888999999999
Q ss_pred EeCCCC---------------------hhcc-------cc---------cc--HHHHhcCCCceEEEeccCCchhcHHHH
Q 046427 252 LHMPLT---------------------PATS-------KM---------FN--DEAFFKMKKGVRIVNVARGGVVDEEAL 292 (595)
Q Consensus 252 l~~Plt---------------------~~t~-------~l---------i~--~~~l~~mk~gailiN~arg~~vd~~aL 292 (595)
+++|.. .+|. ++ +. .+.+....|+++++|++---=+-..++
T Consensus 83 iaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~~~ 162 (480)
T 1obb_A 83 NTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLV 162 (480)
T ss_dssp ECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHH
T ss_pred ECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence 999741 1110 11 00 123455679999999975433345555
Q ss_pred HHHHhcCCeeEEE
Q 046427 293 VRALDSGIISQAA 305 (595)
Q Consensus 293 ~~aL~~g~i~ga~ 305 (595)
.+ +...++.|.+
T Consensus 163 ~k-~p~~rviG~c 174 (480)
T 1obb_A 163 TR-TVPIKAVGFC 174 (480)
T ss_dssp HH-HSCSEEEEEC
T ss_pred HH-CCCCcEEecC
Confidence 45 6777887764
No 361
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=94.84 E-value=0.03 Score=58.64 Aligned_cols=95 Identities=15% Similarity=0.122 Sum_probs=58.7
Q ss_pred CEEEEEe-CChHHHHHHHHHhcCC------CEEEEEC-CCCc---HHH----HHH-cCCc--ccCHHHhccccCEEEEeC
Q 046427 193 KTLAVMG-FGKVGTEVARRAKGLG------MNVIAHD-PYAQ---ADR----ARA-TGVG--LVSFEEAISTADFISLHM 254 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~~~G------~~V~~~d-~~~~---~~~----a~~-~g~~--~~~l~ell~~aD~V~l~~ 254 (595)
.+|+|+| .|.+|+.+.+.|...+ .++..+. +... ... ... ..+. ..+. +.+..+|+|++|+
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~-~~~~~~DvVf~al 88 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEA-AVLGGHDAVFLAL 88 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCH-HHHTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCH-HHhcCCCEEEECC
Confidence 5899999 9999999999998776 4766653 2211 110 000 1111 1233 3356899999999
Q ss_pred CCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHH
Q 046427 255 PLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVR 294 (595)
Q Consensus 255 Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~ 294 (595)
|... + .+....++.|+.+|+.+.---.+..+.++
T Consensus 89 g~~~-s-----~~~~~~~~~G~~vIDlSa~~R~~~~~~~~ 122 (352)
T 2nqt_A 89 PHGH-S-----AVLAQQLSPETLIIDCGADFRLTDAAVWE 122 (352)
T ss_dssp TTSC-C-----HHHHHHSCTTSEEEECSSTTTCSCHHHHH
T ss_pred CCcc-h-----HHHHHHHhCCCEEEEECCCccCCcchhhh
Confidence 9543 2 33333346789999998654444434444
No 362
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.82 E-value=0.047 Score=57.11 Aligned_cols=87 Identities=24% Similarity=0.254 Sum_probs=60.1
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-cHHHHHHcCCccc------CHHHhcc--------ccCEEEEeC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-QADRARATGVGLV------SFEEAIS--------TADFISLHM 254 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~------~l~ell~--------~aD~V~l~~ 254 (595)
.|++|.|+|.|.+|...++.++.+|. +|++.++.. ..+.++++|+..+ ++.+.+. ..|+|+-++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 47899999999999999999999999 899998875 3456677776421 2333332 367777766
Q ss_pred CCChhccccccHHHHhcCCCceEEEecc
Q 046427 255 PLTPATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 255 Plt~~t~~li~~~~l~~mk~gailiN~a 282 (595)
.. +++ -...+..++++..++.++
T Consensus 262 G~-~~~----~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 262 GV-AET----VKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp CC-HHH----HHHHHHHEEEEEEEEECS
T ss_pred CC-HHH----HHHHHHHhccCCEEEEEe
Confidence 52 211 133455677777777765
No 363
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=94.82 E-value=0.019 Score=58.44 Aligned_cols=51 Identities=16% Similarity=0.147 Sum_probs=42.1
Q ss_pred CccEEEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEEcC
Q 046427 520 EGSIILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIGVD 570 (595)
Q Consensus 520 ~~~~Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~~d 570 (595)
....|.+..+|+||+++.|++.|.++|+||..++.......+.-.|.++++
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~ 55 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFN 55 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEE
Confidence 345677889999999999999999999999999987555566667776664
No 364
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.81 E-value=0.03 Score=60.61 Aligned_cols=68 Identities=15% Similarity=0.040 Sum_probs=48.5
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHH---HcCCccc--C-HHHhccccCEEEEeC
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRAR---ATGVGLV--S-FEEAISTADFISLHM 254 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~---~~g~~~~--~-l~ell~~aD~V~l~~ 254 (595)
..++.||++.|||.|.+|...++.|...|.+|.++|+....+... +.++++. . -++.+..+|+|+.+.
T Consensus 7 ~~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at 80 (457)
T 1pjq_A 7 FCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAAT 80 (457)
T ss_dssp EECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECC
T ss_pred EEECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcC
Confidence 357899999999999999999999999999999999876443211 1233321 1 123456777776643
No 365
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.79 E-value=0.091 Score=54.72 Aligned_cols=87 Identities=25% Similarity=0.260 Sum_probs=59.8
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-cHHHHHHcCCcc-c-------CHHHhcc-----ccCEEEEeCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-QADRARATGVGL-V-------SFEEAIS-----TADFISLHMP 255 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~-~-------~l~ell~-----~aD~V~l~~P 255 (595)
.|.+|.|+|.|.+|...++.++.+|. +|++.++.. ..+.++++|... + ++.+.+. ..|+|+-++.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 47899999999999999999999999 899998766 446667777632 1 1222222 3677777765
Q ss_pred CChhccccccHHHHhcCCCc-eEEEecc
Q 046427 256 LTPATSKMFNDEAFFKMKKG-VRIVNVA 282 (595)
Q Consensus 256 lt~~t~~li~~~~l~~mk~g-ailiN~a 282 (595)
..+ + -...++.++++ ..++.++
T Consensus 270 ~~~-~----~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 270 NVK-V----MRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp CHH-H----HHHHHHTBCTTTCEEEECS
T ss_pred cHH-H----HHHHHHhhccCCcEEEEEe
Confidence 311 1 13445667777 7777665
No 366
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=94.78 E-value=0.12 Score=55.35 Aligned_cols=107 Identities=22% Similarity=0.235 Sum_probs=65.6
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEE--------ECCCC-cHHHHHHc----CC------------ccc-CH
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIA--------HDPYA-QADRARAT----GV------------GLV-SF 240 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~--------~d~~~-~~~~a~~~----g~------------~~~-~l 240 (595)
|.++.|+++.|.|+|++|+.+|+.|..+|.+|++ |||.- ..+...+. +. +.+ +-
T Consensus 205 g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~ 284 (421)
T 1v9l_A 205 WGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNP 284 (421)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSST
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCc
Confidence 4579999999999999999999999999999984 33331 11111111 11 222 33
Q ss_pred HHhcc-ccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 241 EEAIS-TADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 241 ~ell~-~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
++++. .||+++-|. +.+.|+.+....++ -.+|+-.+-+++ ..++ .+.|.+..+
T Consensus 285 ~~~~~~~~Dil~P~A-----~~~~I~~~~a~~l~-ak~V~EgAN~p~-t~~a-~~~l~~~Gi 338 (421)
T 1v9l_A 285 DAIFKLDVDIFVPAA-----IENVIRGDNAGLVK-ARLVVEGANGPT-TPEA-ERILYERGV 338 (421)
T ss_dssp TGGGGCCCSEEEECS-----CSSCBCTTTTTTCC-CSEEECCSSSCB-CHHH-HHHHHTTTC
T ss_pred hhhhcCCccEEEecC-----cCCccchhhHHHcC-ceEEEecCCCcC-CHHH-HHHHHHCCC
Confidence 45554 688887776 24445555555553 246666666665 3333 344444444
No 367
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.77 E-value=0.032 Score=55.34 Aligned_cols=66 Identities=18% Similarity=0.247 Sum_probs=48.1
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HHHHHcCCccc--CHHHh-ccccCEEEEeCCCC
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DRARATGVGLV--SFEEA-ISTADFISLHMPLT 257 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~--~l~el-l~~aD~V~l~~Plt 257 (595)
.++|.|.|.|.||+.+++.|...|++|++.++.... ......+++.+ ++.++ +.++|+|+.+....
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTAPD 74 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCCCTTCCEEEECCCCB
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccccCCCCEEEECCCcc
Confidence 378999999999999999999999999999987632 22333454332 22211 77889988877643
No 368
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.76 E-value=0.022 Score=55.33 Aligned_cols=67 Identities=10% Similarity=0.120 Sum_probs=47.0
Q ss_pred ecCCEEEEEe-CChHHHHHHHHHhcCC-CEEEEECCCCcHHH-HHHcCCc-----c---cCHHHhccccCEEEEeCCC
Q 046427 190 LVGKTLAVMG-FGKVGTEVARRAKGLG-MNVIAHDPYAQADR-ARATGVG-----L---VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 190 l~gktvGIIG-lG~IG~~vA~~l~~~G-~~V~~~d~~~~~~~-a~~~g~~-----~---~~l~ell~~aD~V~l~~Pl 256 (595)
...|++.|.| .|.||+.+++.|...| ++|+++++...... ....++. . .+++++++.+|+|+.+...
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~ 98 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG 98 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence 4457899999 6999999999999999 89999988652211 0111221 1 1356778889999877764
No 369
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=94.75 E-value=0.048 Score=55.38 Aligned_cols=52 Identities=10% Similarity=-0.000 Sum_probs=43.4
Q ss_pred CccEEEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEEcCC
Q 046427 520 EGSIILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIGVDE 571 (595)
Q Consensus 520 ~~~~Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~~d~ 571 (595)
....|.+..+|+||+++.|++.|.++|+||..++-......+.-.|.++++-
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~ 58 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQ 58 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEEC
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEec
Confidence 3467788899999999999999999999999999875556666777777764
No 370
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=94.75 E-value=0.05 Score=58.63 Aligned_cols=64 Identities=19% Similarity=0.295 Sum_probs=46.2
Q ss_pred CEEEEEeCChHHHHHHHHHhcC-CCEEEE-ECCCCcH--HHHHHc-C----------------------Cc-ccCHHHhc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL-GMNVIA-HDPYAQA--DRARAT-G----------------------VG-LVSFEEAI 244 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~-~d~~~~~--~~a~~~-g----------------------~~-~~~l~ell 244 (595)
-+|||||+|.||+.+++.+... ++++.+ +|++... ..+.+. | +. +.++++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 3799999999999999988754 677665 6877632 222222 4 11 24799999
Q ss_pred c--ccCEEEEeCCC
Q 046427 245 S--TADFISLHMPL 256 (595)
Q Consensus 245 ~--~aD~V~l~~Pl 256 (595)
+ +.|+|+.++|.
T Consensus 104 ~d~dIDaVviaTp~ 117 (446)
T 3upl_A 104 SNPLIDVIIDATGI 117 (446)
T ss_dssp TCTTCCEEEECSCC
T ss_pred cCCCCCEEEEcCCC
Confidence 7 58999999984
No 371
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=94.71 E-value=0.57 Score=48.89 Aligned_cols=128 Identities=18% Similarity=0.129 Sum_probs=81.5
Q ss_pred hhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCccccccccee-eecCCE--EEEEeC---C--hHH
Q 046427 133 SAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGV-SLVGKT--LAVMGF---G--KVG 204 (595)
Q Consensus 133 ~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~-~l~gkt--vGIIGl---G--~IG 204 (595)
+.|+-.+|+|.|.-... .++ .+++=++.+.++ .|. .+.|++ |+++|= | ++.
T Consensus 151 ~lA~~~~vPVINag~g~-HPt--QaLaDl~TI~E~------------------~g~~~l~glkvvva~vGDl~~~~nrva 209 (359)
T 1zq6_A 151 SFAKYSPVPVINMETIT-HPC--QELAHALALQEH------------------FGTPDLRGKKYVLTWTYHPKPLNTAVA 209 (359)
T ss_dssp HHHHHCSSCEEESSSSC-CHH--HHHHHHHHHHHH------------------HTSSCCTTCEEEEEECCCSSCCCSHHH
T ss_pred HHHHhCCCCEEeCCCCC-CcH--HHHHHHHHHHHH------------------hCCCcccCCeeEEEEEecccccccchH
Confidence 34455789999987655 433 223333333331 122 278999 999997 4 899
Q ss_pred HHHHHHHhcCCCEEEEECCC-C---cHHH---H----HHcCCc--c-cCHHHhccccCEEEEeCCCChh-----------
Q 046427 205 TEVARRAKGLGMNVIAHDPY-A---QADR---A----RATGVG--L-VSFEEAISTADFISLHMPLTPA----------- 259 (595)
Q Consensus 205 ~~vA~~l~~~G~~V~~~d~~-~---~~~~---a----~~~g~~--~-~~l~ell~~aD~V~l~~Plt~~----------- 259 (595)
.+++..+..||++|....|. . +.+. + ++.|.. . .++++++++||+|..-.=..++
T Consensus 210 ~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvVyt~~w~se~~mg~~~~~~~~ 289 (359)
T 1zq6_A 210 NSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPI 289 (359)
T ss_dssp HHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEEECCCCGGGTTCCTTHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEECCccccccCCcchhhHHH
Confidence 99999999999999999876 2 2121 1 144442 2 4899999999999875521100
Q ss_pred ----ccccccHHHHhcCCCceEEEecc
Q 046427 260 ----TSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 260 ----t~~li~~~~l~~mk~gailiN~a 282 (595)
....++.+.++.+| +++|.-|.
T Consensus 290 ~~~~~~y~vt~e~l~~a~-~ai~MHcL 315 (359)
T 1zq6_A 290 RDQYQHFIVDERKMALTN-NGVFSHCL 315 (359)
T ss_dssp HGGGGGGSBCHHHHHTSS-SCEEECCS
T ss_pred HHHhcCCCCCHHHHHhCC-CCEEECCC
Confidence 11335666666666 66666665
No 372
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.71 E-value=0.028 Score=57.93 Aligned_cols=87 Identities=18% Similarity=0.213 Sum_probs=59.3
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc------CHHHhcc----ccCEEEEeCCCChh
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV------SFEEAIS----TADFISLHMPLTPA 259 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~------~l~ell~----~aD~V~l~~Plt~~ 259 (595)
.|++|.|+|.|.+|...++.++.+|.+|++.++.. ..+.++++|...+ ++.+.+. ..|+|+.++...+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~- 244 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPK- 244 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHH-
Confidence 47899999999999999999999999999998865 4456677776421 2222222 4677776664211
Q ss_pred ccccccHHHHhcCCCceEEEecc
Q 046427 260 TSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 260 t~~li~~~~l~~mk~gailiN~a 282 (595)
+ -...+..++++..++.++
T Consensus 245 ~----~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 245 A----FSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp H----HHHHHHHEEEEEEEEECS
T ss_pred H----HHHHHHHhccCCEEEEeC
Confidence 1 133455567777777765
No 373
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.70 E-value=0.013 Score=59.29 Aligned_cols=40 Identities=20% Similarity=0.250 Sum_probs=36.5
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ 226 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~ 226 (595)
..++.||+|.|||.|.+|...++.|...|.+|.++++...
T Consensus 8 ~~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 8 AHQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp EECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred EEEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 4578999999999999999999999999999999998653
No 374
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.67 E-value=0.055 Score=58.43 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=31.5
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEE
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIA 220 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~ 220 (595)
|.++.|+||.|-|+|++|+..|+.|...|.+|++
T Consensus 247 G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVa 280 (470)
T 2bma_A 247 NIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLT 280 (470)
T ss_dssp TCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECE
T ss_pred cCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEE
Confidence 4578999999999999999999999999999984
No 375
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.67 E-value=0.027 Score=53.12 Aligned_cols=35 Identities=20% Similarity=0.274 Sum_probs=31.8
Q ss_pred cCCEEEEEe-CChHHHHHHHHHhcCCCEEEEECCCC
Q 046427 191 VGKTLAVMG-FGKVGTEVARRAKGLGMNVIAHDPYA 225 (595)
Q Consensus 191 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~ 225 (595)
.|+++.|+| .|.||+.+++.++..|.+|++.++..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 73 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD 73 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH
Confidence 578999999 69999999999999999999998764
No 376
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=94.66 E-value=0.047 Score=56.12 Aligned_cols=63 Identities=22% Similarity=0.251 Sum_probs=46.3
Q ss_pred CEEEEEeCChHHHHHHHHHhc--CCCEEE-EECCCCc---HHHHHHcCCcc--cCHHHhcc-----ccCEEEEeCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKG--LGMNVI-AHDPYAQ---ADRARATGVGL--VSFEEAIS-----TADFISLHMP 255 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~--~G~~V~-~~d~~~~---~~~a~~~g~~~--~~l~ell~-----~aD~V~l~~P 255 (595)
.+|||||+|.||+.+++.+.. -++++. ++|++.. ...+++.|+.. .+.+++++ +.|+|+.|+|
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp 80 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATS 80 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCC
Confidence 479999999999999999843 467654 4677653 34455677642 35677754 5899999999
No 377
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=94.65 E-value=0.38 Score=50.27 Aligned_cols=131 Identities=20% Similarity=0.245 Sum_probs=84.2
Q ss_pred hhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCC--hHHHHHHHH
Q 046427 133 SAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFG--KVGTEVARR 210 (595)
Q Consensus 133 ~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~ 210 (595)
+.+...+|+|.|.-|....++ .+++=++.+.++ +.+..+.|.+|++||=+ ++..+.+..
T Consensus 141 ~la~~s~vPVING~g~~~HPt--QaL~Dl~Ti~e~-----------------~~~~~l~gl~ia~vGD~~~~va~S~~~~ 201 (358)
T 4h31_A 141 ELGAFAGVPVWNGLTDEFHPT--QILADFLTMLEH-----------------SQGKALADIQFAYLGDARNNVGNSLMVG 201 (358)
T ss_dssp HHHHHSSSCEEESCCSSCCHH--HHHHHHHHHHHT-----------------TTTCCGGGCEEEEESCTTSHHHHHHHHH
T ss_pred HhhhhccCceECCCCcCCCch--HHHHHHHHHHHH-----------------hcCCCcCceEEEecCCCCcccchHHHHH
Confidence 345567899999655443332 222223333221 12346889999999954 899999999
Q ss_pred HhcCCCEEEEECCCC---cHH-------HHHHcCCcc---cCHHHhccccCEEEEeCCCC----hh---------ccccc
Q 046427 211 AKGLGMNVIAHDPYA---QAD-------RARATGVGL---VSFEEAISTADFISLHMPLT----PA---------TSKMF 264 (595)
Q Consensus 211 l~~~G~~V~~~d~~~---~~~-------~a~~~g~~~---~~l~ell~~aD~V~l~~Plt----~~---------t~~li 264 (595)
+..||++|....|.. +.+ .+.+.|... .++++.+++||+|..-.=.. ++ ...-+
T Consensus 202 ~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~s~~~~~~~~~~~~~~~~~y~v 281 (358)
T 4h31_A 202 AAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWDERVALMKPYQV 281 (358)
T ss_dssp HHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCB
T ss_pred HHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEEEEEEEcccCchhHHHHHHHHhCccc
Confidence 999999999988742 221 123445432 38999999999998532211 11 11346
Q ss_pred cHHHHhc-CCCceEEEecc
Q 046427 265 NDEAFFK-MKKGVRIVNVA 282 (595)
Q Consensus 265 ~~~~l~~-mk~gailiN~a 282 (595)
+.+.++. .||+++|.-|.
T Consensus 282 ~~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 282 NMNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp CHHHHHHTTCTTCEEEECS
T ss_pred CHHHHHhcCCCCcEEECCC
Confidence 7777775 47889998886
No 378
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.63 E-value=0.033 Score=53.22 Aligned_cols=64 Identities=19% Similarity=0.177 Sum_probs=47.0
Q ss_pred CEEEEEe-CChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcc--------cCHHHhccccCEEEEeCCC
Q 046427 193 KTLAVMG-FGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGL--------VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~--------~~l~ell~~aD~V~l~~Pl 256 (595)
++|.|.| .|.||+.+++.|...|.+|++.++..........+++. .++.++++++|+|+.+...
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNP 77 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence 6899999 59999999999999999999999875321111122221 1366788899999887754
No 379
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.62 E-value=0.078 Score=50.35 Aligned_cols=64 Identities=19% Similarity=0.258 Sum_probs=46.2
Q ss_pred CEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCCcHHH-HHHcCCccc--CHH----HhccccCEEEEeCCC
Q 046427 193 KTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYAQADR-ARATGVGLV--SFE----EAISTADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-a~~~g~~~~--~l~----ell~~aD~V~l~~Pl 256 (595)
++|.|.|. |.||+.+++.|...|++|++.++...... ....+++.+ |+. +.+..+|+|+.+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 36889997 99999999999999999999998653211 112344322 322 567889999888765
No 380
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.61 E-value=0.046 Score=56.81 Aligned_cols=88 Identities=17% Similarity=0.247 Sum_probs=62.2
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHH-HcCCccc----C---HHHhccccCEEEEeCCCChhcc
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRAR-ATGVGLV----S---FEEAISTADFISLHMPLTPATS 261 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~-~~g~~~~----~---l~ell~~aD~V~l~~Plt~~t~ 261 (595)
.|.+|.|+|.|.+|...++.++.+|.+|++.++... .+.+. ++|...+ + +.++....|+|+-++.... +
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~-~- 257 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHH-A- 257 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCC-C-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChH-H-
Confidence 578999999999999999999999999999998763 34455 6776421 2 2233345788888776321 1
Q ss_pred ccccHHHHhcCCCceEEEeccC
Q 046427 262 KMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 262 ~li~~~~l~~mk~gailiN~ar 283 (595)
-...+..++++..++.++-
T Consensus 258 ---~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 258 ---LEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ---SHHHHTTEEEEEEEEECSC
T ss_pred ---HHHHHHHhccCCEEEEeCC
Confidence 1345566788888887763
No 381
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=94.59 E-value=0.073 Score=55.67 Aligned_cols=85 Identities=26% Similarity=0.380 Sum_probs=54.2
Q ss_pred EEEEEeCChHHHHHHHHHhcC-CCEEEEEC-CCCcHHH-HH--Hc----C-------------------Cccc---CHHH
Q 046427 194 TLAVMGFGKVGTEVARRAKGL-GMNVIAHD-PYAQADR-AR--AT----G-------------------VGLV---SFEE 242 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d-~~~~~~~-a~--~~----g-------------------~~~~---~l~e 242 (595)
+|||+|+|+||+.+.|.+... .++|.+.+ |....+. +. +. | +... +.++
T Consensus 19 kVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~ 98 (354)
T 3cps_A 19 TLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDPAE 98 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCGGG
T ss_pred EEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCChHH
Confidence 899999999999999998866 68887764 3443321 11 00 0 0011 3444
Q ss_pred hc---cccCEEEEeCCCChhccccccHHHHhcCCCce--EEEeccC
Q 046427 243 AI---STADFISLHMPLTPATSKMFNDEAFFKMKKGV--RIVNVAR 283 (595)
Q Consensus 243 ll---~~aD~V~l~~Plt~~t~~li~~~~l~~mk~ga--iliN~ar 283 (595)
+- ..+|+|+.|+|.-. ++.. .-..++.|+ ++|+.+.
T Consensus 99 i~w~~~~vDvV~eatg~~~-s~e~----a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 99 IPWGASGAQIVCESTGVFT-TEEK----ASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp CCHHHHTCCEEEECSSSCC-SHHH----HGGGGTTTCSEEEESSCC
T ss_pred CCcccCCCCEEEECCCchh-hHHH----HHHHHHcCCcEEEEeCCC
Confidence 42 57999999999533 2222 223467788 9999865
No 382
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=94.57 E-value=0.03 Score=57.72 Aligned_cols=85 Identities=15% Similarity=0.286 Sum_probs=58.6
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCccc-----C---HHHh-ccccCEEEEeCCCChhccc
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLV-----S---FEEA-ISTADFISLHMPLTPATSK 262 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-----~---l~el-l~~aD~V~l~~Plt~~t~~ 262 (595)
.+++.|+|+|++|+.+|+.|...|. |++.|+++..-...+.++... + |+++ +++||.++++++..+ .+
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~--~n 191 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS--ET 191 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHH--HH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccH--HH
Confidence 5689999999999999999999999 999998764322445565322 2 4445 788999999987432 33
Q ss_pred cccHHHHhcCCCceEEE
Q 046427 263 MFNDEAFFKMKKGVRIV 279 (595)
Q Consensus 263 li~~~~l~~mk~gaili 279 (595)
+.-....+.+.+...++
T Consensus 192 ~~~~~~ar~~~~~~~ii 208 (336)
T 1lnq_A 192 IHCILGIRKIDESVRII 208 (336)
T ss_dssp HHHHHHHHTTCTTSEEE
T ss_pred HHHHHHHHHHCCCCeEE
Confidence 34344555666664443
No 383
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=94.54 E-value=0.025 Score=54.12 Aligned_cols=64 Identities=11% Similarity=0.146 Sum_probs=44.9
Q ss_pred CEEEEEe-CChHHHHHHHHHh-cCCCEEEEECCCCc-HHHH---HHcCCcc--------cCHHHhccccCEEEEeCCC
Q 046427 193 KTLAVMG-FGKVGTEVARRAK-GLGMNVIAHDPYAQ-ADRA---RATGVGL--------VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~-~~G~~V~~~d~~~~-~~~a---~~~g~~~--------~~l~ell~~aD~V~l~~Pl 256 (595)
|++.|.| .|.||+.+++.|. ..|++|++.+++.. .... ...++.. .+++++++.+|+|+.+...
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~ 83 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAME 83 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCC
Confidence 6799999 5999999999999 89999999988643 2111 1112211 1355677788888877763
No 384
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=94.52 E-value=0.13 Score=54.49 Aligned_cols=90 Identities=18% Similarity=0.155 Sum_probs=65.3
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHh-
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFF- 270 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~- 270 (595)
-.++-|+|.|.+|+++|+.++.+|++|+++|++.... + .+-+..+|-++...|. ..+.. +.
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~----------~-~~~fp~a~~~~~~~p~-----~~~~~--~~~ 265 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFA----------T-TARFPTADEVVVDWPH-----RYLAA--QAE 265 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTS----------C-TTTCSSSSEEEESCHH-----HHHHH--HHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhc----------c-cccCCCceEEEeCChH-----HHHHh--hcc
Confidence 3489999999999999999999999999999865211 1 1234566655555441 11111 11
Q ss_pred --cCCCceEEEeccCCchhcHHHHHHHHhcC
Q 046427 271 --KMKKGVRIVNVARGGVVDEEALVRALDSG 299 (595)
Q Consensus 271 --~mk~gailiN~arg~~vd~~aL~~aL~~g 299 (595)
.+.++..+|=+.++.-.|...|..+|+.+
T Consensus 266 ~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~ 296 (386)
T 2we8_A 266 AGAIDARTVVCVLTHDPKFDVPLLEVALRLP 296 (386)
T ss_dssp HTCCCTTCEEEECCCCHHHHHHHHHHHTTSS
T ss_pred ccCCCCCcEEEEEECChHhHHHHHHHHhcCC
Confidence 15678888888899888999999999887
No 385
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=94.51 E-value=0.055 Score=55.51 Aligned_cols=89 Identities=16% Similarity=0.128 Sum_probs=57.3
Q ss_pred CEEEEEeCChHHHHHHHHHhcCC--CEEEEECCCCcHH--HHHHc--------CCcc-cCHHHhccccCEEEEeCCCChh
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLG--MNVIAHDPYAQAD--RARAT--------GVGL-VSFEEAISTADFISLHMPLTPA 259 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~~--~a~~~--------g~~~-~~l~ell~~aD~V~l~~Plt~~ 259 (595)
++|+|||.|.+|.+++..+...+ -++..||...... .+.++ .+.. .+-.+.+++||+|+++.+...
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~- 79 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQ- 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCC-
Confidence 47999999999999999988655 5899999864211 11111 1111 133677999999999987432
Q ss_pred cccc-------ccH-------HHHhcCCCceEEEecc
Q 046427 260 TSKM-------FND-------EAFFKMKKGVRIVNVA 282 (595)
Q Consensus 260 t~~l-------i~~-------~~l~~mk~gailiN~a 282 (595)
..++ .|. +.+....|++++++++
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 116 (310)
T 2xxj_A 80 RPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT 116 (310)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence 2221 011 1223347889999973
No 386
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.51 E-value=0.061 Score=55.78 Aligned_cols=88 Identities=22% Similarity=0.303 Sum_probs=60.5
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-cHHHHHHcCCccc---C---HH----Hhc----cccCEEEEeC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-QADRARATGVGLV---S---FE----EAI----STADFISLHM 254 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~---~---l~----ell----~~aD~V~l~~ 254 (595)
.|.+|.|+|.|.+|...++.++.+|. +|++.++.. ..+.++++|...+ + -+ ++. ...|+|+-++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 47899999999999999999999999 999998765 3456677776321 1 11 111 2478887777
Q ss_pred CCChhccccccHHHHhcCCCceEEEeccC
Q 046427 255 PLTPATSKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 255 Plt~~t~~li~~~~l~~mk~gailiN~ar 283 (595)
.... + -...++.++++..++.++-
T Consensus 251 g~~~-~----~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 251 GAEA-S----IQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp CCHH-H----HHHHHHHSCTTCEEEECSC
T ss_pred CChH-H----HHHHHHHhcCCCEEEEEec
Confidence 6321 1 1334566777777777763
No 387
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=94.48 E-value=0.054 Score=55.45 Aligned_cols=55 Identities=16% Similarity=0.047 Sum_probs=44.4
Q ss_pred eecCc-cEEEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEEcCC
Q 046427 517 VSLEG-SIILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIGVDE 571 (595)
Q Consensus 517 ~~~~~-~~Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~~d~ 571 (595)
|.|.. ..|.+..+|+||+|+.|++.|.++|+||..++-......+.-.|.++++-
T Consensus 17 ~~~~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~ 72 (302)
T 3o1l_A 17 FQGMRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRA 72 (302)
T ss_dssp TCCCCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEG
T ss_pred ecccceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEec
Confidence 33433 46677889999999999999999999999999876555677788887764
No 388
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.47 E-value=0.043 Score=55.45 Aligned_cols=85 Identities=20% Similarity=0.264 Sum_probs=57.5
Q ss_pred cCCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc-C------HHHhccccCEEEEeCCCChhcc
Q 046427 191 VGKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV-S------FEEAISTADFISLHMPLTPATS 261 (595)
Q Consensus 191 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~-~------l~ell~~aD~V~l~~Plt~~t~ 261 (595)
.|+++.|+|. |.+|...++.++.+|++|++.+++. ..+.++++|...+ + +.+.+...|+|+- +.. + +
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~-~- 200 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-K-E- 200 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-T-T-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-H-H-
Confidence 4789999998 9999999999999999999998865 3455666675421 1 1122245677776 653 1 1
Q ss_pred ccccHHHHhcCCCceEEEecc
Q 046427 262 KMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 262 ~li~~~~l~~mk~gailiN~a 282 (595)
-...++.|+++..++.++
T Consensus 201 ---~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 201 ---VEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp ---HHHHHTTEEEEEEEEEC-
T ss_pred ---HHHHHHhhccCCEEEEEe
Confidence 234556677777776664
No 389
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.46 E-value=0.088 Score=55.05 Aligned_cols=87 Identities=28% Similarity=0.315 Sum_probs=57.9
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-cHHHHHHcCCccc--------CHHHhcc-----ccCEEEEeCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-QADRARATGVGLV--------SFEEAIS-----TADFISLHMP 255 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~--------~l~ell~-----~aD~V~l~~P 255 (595)
.|.+|.|+|.|.+|...++.++.+|. +|++.|+.. ..+.++++|+..+ ++.+.+. ..|+|+-++.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 57899999999999999999999998 899999766 4566777776421 1222221 3677766665
Q ss_pred CChhccccccHHHHhcCCCc-eEEEecc
Q 046427 256 LTPATSKMFNDEAFFKMKKG-VRIVNVA 282 (595)
Q Consensus 256 lt~~t~~li~~~~l~~mk~g-ailiN~a 282 (595)
. +++ -...+..++++ ..++.++
T Consensus 273 ~-~~~----~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 273 N-VSV----MRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp C-HHH----HHHHHHTBCTTTCEEEECS
T ss_pred C-HHH----HHHHHHHhhccCCEEEEEc
Confidence 2 111 13345556664 6666654
No 390
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=94.43 E-value=0.046 Score=56.83 Aligned_cols=64 Identities=23% Similarity=0.335 Sum_probs=43.7
Q ss_pred EEEEEeCChHHHHHHHHHhc-CCCEEEEE-CCCCcH--HHHHHc------------------CCcc-cCHHHhccccCEE
Q 046427 194 TLAVMGFGKVGTEVARRAKG-LGMNVIAH-DPYAQA--DRARAT------------------GVGL-VSFEEAISTADFI 250 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~-~G~~V~~~-d~~~~~--~~a~~~------------------g~~~-~~l~ell~~aD~V 250 (595)
+|||+|+|.||+.+++.+.. -++++.+. |+.... ..+... ++.. .+.++++.++|+|
T Consensus 3 kVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDvV 82 (337)
T 1cf2_P 3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADIV 82 (337)
T ss_dssp EEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSEE
T ss_pred EEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCEE
Confidence 79999999999999999886 56887664 443211 112211 1111 1467778899999
Q ss_pred EEeCCCC
Q 046427 251 SLHMPLT 257 (595)
Q Consensus 251 ~l~~Plt 257 (595)
+.|+|..
T Consensus 83 ~~atp~~ 89 (337)
T 1cf2_P 83 IDCTPEG 89 (337)
T ss_dssp EECCSTT
T ss_pred EECCCch
Confidence 9999953
No 391
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.40 E-value=0.057 Score=56.22 Aligned_cols=45 Identities=33% Similarity=0.360 Sum_probs=38.1
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGV 235 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~ 235 (595)
.|++|.|+|.|.||...++.++.+|.+|++.++.. ..+.++++|.
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa 234 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA 234 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC
Confidence 47899999999999999999999999999998765 3455666665
No 392
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.37 E-value=0.078 Score=57.11 Aligned_cols=86 Identities=26% Similarity=0.361 Sum_probs=62.9
Q ss_pred eecCCEEEEEeCCh----------HHHHHHHHHhcCCCEEEEECCCCcHHHHHHcC--Cccc-CHHHhccccCEEEEeCC
Q 046427 189 SLVGKTLAVMGFGK----------VGTEVARRAKGLGMNVIAHDPYAQADRARATG--VGLV-SFEEAISTADFISLHMP 255 (595)
Q Consensus 189 ~l~gktvGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g--~~~~-~l~ell~~aD~V~l~~P 255 (595)
.+.|++|+|+|+.- =...+++.|+..|.+|.+|||....+.....+ +.++ ++++++++||.|+++++
T Consensus 330 ~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~~~~~~~~~~~~~~~~~~~~~~a~~~aDavvi~t~ 409 (444)
T 3vtf_A 330 GLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGARVYVHDPMAMEKARAVLGDSVTYVEDPQALLDQVEGVIIATA 409 (444)
T ss_dssp CCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHGGGSEECSCHHHHHHHCSEEEECSC
T ss_pred ccCCCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChHHHHhcCCCceecCCHHHHHhCCCEEEEccC
Confidence 58999999999862 36779999999999999999987433323333 4444 78999999999999987
Q ss_pred CChhccccccHHHHhcCCCceEEEeccCC
Q 046427 256 LTPATSKMFNDEAFFKMKKGVRIVNVARG 284 (595)
Q Consensus 256 lt~~t~~li~~~~l~~mk~gailiN~arg 284 (595)
.++-+.+ + + ++.+++|+ |+
T Consensus 410 -h~ef~~l-d------~-~~~vv~D~-Rn 428 (444)
T 3vtf_A 410 -WPQYEGL-D------Y-RGKVVVDG-RY 428 (444)
T ss_dssp -CGGGGGS-C------C-TTCEEEES-SC
T ss_pred -CHHHhCC-C------c-CCCEEEEC-CC
Confidence 3433322 1 2 35788885 53
No 393
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.36 E-value=0.1 Score=53.87 Aligned_cols=88 Identities=17% Similarity=0.168 Sum_probs=58.1
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc-------C-HHHh---c-----cccCEEEEe
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV-------S-FEEA---I-----STADFISLH 253 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~-------~-l~el---l-----~~aD~V~l~ 253 (595)
.|++|.|+|.|.+|...++.++.+|.+|++.++.. ..+.++++|...+ + .+++ . ...|+|+-+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 47899999999999999999999999999998765 3455666775311 1 1122 2 246777776
Q ss_pred CCCChhccccccHHHHhcCCCceEEEeccC
Q 046427 254 MPLTPATSKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 254 ~Plt~~t~~li~~~~l~~mk~gailiN~ar 283 (595)
+.... + -...+..++++..++.++.
T Consensus 248 ~g~~~-~----~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 248 SGNEK-C----ITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SCCHH-H----HHHHHHHSCTTCEEEECSC
T ss_pred CCCHH-H----HHHHHHHHhcCCEEEEEec
Confidence 65311 1 1234555677777776653
No 394
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=94.35 E-value=0.063 Score=55.80 Aligned_cols=85 Identities=20% Similarity=0.344 Sum_probs=52.3
Q ss_pred EEEEEeCChHHHHHHHHHhcC-CCEEEEE-CCCCcHHHH-H------HcC-----C----------------ccc---CH
Q 046427 194 TLAVMGFGKVGTEVARRAKGL-GMNVIAH-DPYAQADRA-R------ATG-----V----------------GLV---SF 240 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~-G~~V~~~-d~~~~~~~a-~------~~g-----~----------------~~~---~l 240 (595)
+|||+|+|+||+.+++.+... +++|.+. |+....+.. . ..| . ... ++
T Consensus 5 kVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~~dp 84 (337)
T 3e5r_O 5 KIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIRNP 84 (337)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECCSCG
T ss_pred EEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEecCCh
Confidence 799999999999999998865 6787765 442222110 1 001 0 001 45
Q ss_pred HHh-c--cccCEEEEeCCCChhccccccHHHHhcCCCce--EEEeccC
Q 046427 241 EEA-I--STADFISLHMPLTPATSKMFNDEAFFKMKKGV--RIVNVAR 283 (595)
Q Consensus 241 ~el-l--~~aD~V~l~~Plt~~t~~li~~~~l~~mk~ga--iliN~ar 283 (595)
+++ + ..+|+|+.|+|... ++... -..++.|+ ++|+.+.
T Consensus 85 ~~l~w~~~~vDvV~eaTg~~~-~~e~a----~~~l~aGak~VVIs~pa 127 (337)
T 3e5r_O 85 DEIPWAEAGAEYVVESTGVFT-DKEKA----AAHLKGGAKKVVISAPS 127 (337)
T ss_dssp GGCCHHHHTCSEEEECSSSCC-SHHHH----THHHHTTCSEEEESSCC
T ss_pred HHccccccCCCEEEECCCchh-hHHHH----HHHHHcCCCEEEEecCC
Confidence 554 2 47899999998533 33222 22355677 8888764
No 395
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=94.34 E-value=0.031 Score=53.33 Aligned_cols=51 Identities=16% Similarity=0.154 Sum_probs=38.7
Q ss_pred CccEEEEEecCCCCchhHHHhhhhcCCccccceEeeeec----CCCcEEEEEEcC
Q 046427 520 EGSIILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIA----PQKQAVMTIGVD 570 (595)
Q Consensus 520 ~~~~Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~----~g~~al~vi~~d 570 (595)
..+.|.+..+|+||+++.|+++|+++|+||..++..... ..+.-.|.+.++
T Consensus 92 ~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~ 146 (195)
T 2nyi_A 92 REYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVA 146 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEE
T ss_pred cEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEE
Confidence 346677788999999999999999999999999886433 233445555554
No 396
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=94.33 E-value=0.062 Score=55.73 Aligned_cols=93 Identities=11% Similarity=0.198 Sum_probs=60.1
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCC--EEEEECCCCcHHH--HH--HcC--C----cc---cCHHHhccccCEEEEe
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGM--NVIAHDPYAQADR--AR--ATG--V----GL---VSFEEAISTADFISLH 253 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~--~~g--~----~~---~~l~ell~~aD~V~l~ 253 (595)
....++|+|||.|.||..+|..+...|. ++..||....... +. +.. + .. .+.+ .+++||+|+++
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEEC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEc
Confidence 3567899999999999999999886676 8999998642111 11 111 1 11 1444 59999999998
Q ss_pred CCCCh---hcc-ccccH---------HHHhcCCCceEEEecc
Q 046427 254 MPLTP---ATS-KMFND---------EAFFKMKKGVRIVNVA 282 (595)
Q Consensus 254 ~Plt~---~t~-~li~~---------~~l~~mk~gailiN~a 282 (595)
..... +|+ +++.. +.+....|++++++++
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt 136 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS 136 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 75321 222 22211 1334457899999997
No 397
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=94.30 E-value=0.051 Score=58.05 Aligned_cols=64 Identities=23% Similarity=0.276 Sum_probs=47.0
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCC---ccc---CHHHhccccCEEEE
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGV---GLV---SFEEAISTADFISL 252 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~---~~~---~l~ell~~aD~V~l 252 (595)
-+.||+|+|+|-|.+|+.+++.++.+|++|+++|++.. ......... .+. .+.++++++|+|+.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 46799999999999999999999999999999998753 211111111 112 25667788999983
No 398
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=94.29 E-value=0.018 Score=59.80 Aligned_cols=99 Identities=15% Similarity=0.137 Sum_probs=60.1
Q ss_pred EEEEEeCChHHHHHHHHHhcC---------CCEEEE-ECCCCcHHHHHHcCC--cccCHHHhccccCEEEEeCCCChhcc
Q 046427 194 TLAVMGFGKVGTEVARRAKGL---------GMNVIA-HDPYAQADRARATGV--GLVSFEEAISTADFISLHMPLTPATS 261 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~---------G~~V~~-~d~~~~~~~a~~~g~--~~~~l~ell~~aD~V~l~~Plt~~t~ 261 (595)
+|||||+|.||+.+++.++.. +++|.+ +|++.... +..+. ...++++++ +.|+|+.|+|......
T Consensus 5 rvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~--~~~~~~~~~~d~~~ll-~iDvVve~t~~~~~a~ 81 (332)
T 2ejw_A 5 KIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP--RAIPQELLRAEPFDLL-EADLVVEAMGGVEAPL 81 (332)
T ss_dssp EEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC--CSSCGGGEESSCCCCT-TCSEEEECCCCSHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh--hccCcccccCCHHHHh-CCCEEEECCCCcHHHH
Confidence 799999999999999988754 467655 57654211 11111 123788888 9999999998542112
Q ss_pred ccccHHHHhcCCCceEEEeccCCchh-cHHHHHHHHhcC
Q 046427 262 KMFNDEAFFKMKKGVRIVNVARGGVV-DEEALVRALDSG 299 (595)
Q Consensus 262 ~li~~~~l~~mk~gailiN~arg~~v-d~~aL~~aL~~g 299 (595)
..+ .+.|+.|.-++......+. ..+.|.++.++.
T Consensus 82 ~~~----~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 82 RLV----LPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp HHH----HHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred HHH----HHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 122 2234555555554333332 355677766665
No 399
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=94.28 E-value=0.064 Score=54.94 Aligned_cols=63 Identities=17% Similarity=0.238 Sum_probs=44.8
Q ss_pred EEEEEeCChHHHHHHHHHhcCCC-EEEEECCCCcHHH--HH---H----c--CC--cc-cCHHHhccccCEEEEeCCCC
Q 046427 194 TLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYAQADR--AR---A----T--GV--GL-VSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~--a~---~----~--g~--~~-~~l~ell~~aD~V~l~~Plt 257 (595)
+|+|||.|.+|..+|..+...|+ +|..+|....... +. + . .. .. .+. +.+++||+|+++.+..
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~ 78 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIG 78 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCC
Confidence 58999999999999998876566 7999998753211 11 1 1 22 22 354 6799999999997743
No 400
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=94.28 E-value=0.068 Score=55.51 Aligned_cols=87 Identities=20% Similarity=0.269 Sum_probs=53.7
Q ss_pred CEEEEEeCChHHHHHHHHHhc-CCCEEEEE-CCCCcHHHH---HHc----C-------------------Cc---ccCHH
Q 046427 193 KTLAVMGFGKVGTEVARRAKG-LGMNVIAH-DPYAQADRA---RAT----G-------------------VG---LVSFE 241 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~-~G~~V~~~-d~~~~~~~a---~~~----g-------------------~~---~~~l~ 241 (595)
.+|||+|+|+||+.+++.+.. -+++|.+. |+....+.. .+. | +. ..+.+
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~ 83 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS 83 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCHH
Confidence 389999999999999999874 46888765 432222211 010 0 00 01455
Q ss_pred Hh-c--cccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCC
Q 046427 242 EA-I--STADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARG 284 (595)
Q Consensus 242 el-l--~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg 284 (595)
++ + .++|+|+.|+|... ++.. .-..++.|+..|.++-.
T Consensus 84 ~l~~~~~~vDvV~eatg~~~-~~e~----a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 84 KIKWGDAGAEYVVESTGVFT-TMEK----AGAHLQGGAKRVIISAP 124 (335)
T ss_dssp GCCTTTTTCCEEEECSSSCC-SHHH----HGGGGGGTCSEEEESSC
T ss_pred HCccccCCCCEEEECCCchh-hHHH----HHHHHhCCCeEEEeccC
Confidence 55 2 57999999999533 2222 22346778777777654
No 401
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=94.26 E-value=0.085 Score=58.79 Aligned_cols=74 Identities=16% Similarity=0.267 Sum_probs=51.6
Q ss_pred CCceEEeCCCC-CchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccce-eeecCCEEEEEeCChHHHHHHHHHhcCC
Q 046427 138 HGCLVVNAPTA-NTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVG-VSLVGKTLAVMGFGKVGTEVARRAKGLG 215 (595)
Q Consensus 138 ~gI~V~n~p~~-~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g-~~l~gktvGIIGlG~IG~~vA~~l~~~G 215 (595)
.+-+.++-... +....||...-+-|-+.| |.-....| ..|++++|.|||+|.+|..+|+.|...|
T Consensus 283 l~~~~~~l~~~~dp~~la~~~~~Lnlklm~-------------wRllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aG 349 (615)
T 4gsl_A 283 LAPRVVDLSSLLDPLKIADQSVDLNLKLMK-------------WRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWG 349 (615)
T ss_dssp SCCEEEECHHHHCHHHHHHHHHHHHHHHHH-------------HHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred cceeEEeccccCCHHHHHhhhhhhhhHHHH-------------HhhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcC
Confidence 34555555443 666777777766655544 32211122 2589999999999999999999999888
Q ss_pred C-EEEEECCC
Q 046427 216 M-NVIAHDPY 224 (595)
Q Consensus 216 ~-~V~~~d~~ 224 (595)
. ++..+|..
T Consensus 350 VG~ItLvD~D 359 (615)
T 4gsl_A 350 VRKITFVDNG 359 (615)
T ss_dssp CCEEEEECCC
T ss_pred CCEEEEEcCC
Confidence 6 78888864
No 402
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=94.26 E-value=0.19 Score=53.52 Aligned_cols=64 Identities=30% Similarity=0.371 Sum_probs=49.7
Q ss_pred ecCCEEEEEe-----CCh---HHHHHHHHHhcCCCEEEEECCCC---cHHH-------HHHcCC--c-ccCHHHhccccC
Q 046427 190 LVGKTLAVMG-----FGK---VGTEVARRAKGLGMNVIAHDPYA---QADR-------ARATGV--G-LVSFEEAISTAD 248 (595)
Q Consensus 190 l~gktvGIIG-----lG~---IG~~vA~~l~~~G~~V~~~d~~~---~~~~-------a~~~g~--~-~~~l~ell~~aD 248 (595)
|.|++|+||| +|. +.++++..+..||++|....|.. .++. +.+.|. . ..++++++++||
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~~eav~~AD 265 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSMAEAFKDAD 265 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCHHHHHTTCS
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhcCCC
Confidence 8899999997 354 99999999999999999988752 2221 223564 3 348999999999
Q ss_pred EEEEe
Q 046427 249 FISLH 253 (595)
Q Consensus 249 ~V~l~ 253 (595)
+|..-
T Consensus 266 VVytd 270 (418)
T 2yfk_A 266 VVYPK 270 (418)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99984
No 403
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=94.24 E-value=0.12 Score=55.48 Aligned_cols=36 Identities=25% Similarity=0.259 Sum_probs=31.9
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCCEEE-EEC
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVI-AHD 222 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~-~~d 222 (595)
|.++.|+||.|-|+|++|+..|+.|...|.+|+ +.|
T Consensus 234 g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD 270 (456)
T 3r3j_A 234 NDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSD 270 (456)
T ss_dssp TCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEEC
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 457999999999999999999999999999987 344
No 404
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=94.23 E-value=0.081 Score=56.95 Aligned_cols=34 Identities=38% Similarity=0.634 Sum_probs=31.7
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEE
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIA 220 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~ 220 (595)
|.++.|+++.|.|+|++|+.+|+.|...|.+|++
T Consensus 225 G~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVa 258 (449)
T 1bgv_A 225 NDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVT 258 (449)
T ss_dssp TCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEE
T ss_pred cCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 4578999999999999999999999999999986
No 405
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.20 E-value=0.056 Score=56.35 Aligned_cols=87 Identities=22% Similarity=0.164 Sum_probs=55.0
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-cHHHHHHcCCccc------CHHHhcc-----ccCEEEEeCCCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-QADRARATGVGLV------SFEEAIS-----TADFISLHMPLT 257 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~------~l~ell~-----~aD~V~l~~Plt 257 (595)
.|++|.|+|.|.+|...++.++.+|. +|++.|+.. ..+.++++|...+ ++.+.+. ..|+|+-++..
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~- 268 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGS- 268 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCC-
Confidence 47899999999999999999999998 799998765 3455666665321 2222111 25666665542
Q ss_pred hhccccccHHHHhcCCCceEEEecc
Q 046427 258 PATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 258 ~~t~~li~~~~l~~mk~gailiN~a 282 (595)
+++ -...+..++++..++.++
T Consensus 269 ~~~----~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 269 PEI----LKQGVDALGILGKIAVVG 289 (371)
T ss_dssp HHH----HHHHHHTEEEEEEEEECC
T ss_pred HHH----HHHHHHHHhcCCEEEEeC
Confidence 111 123445566666666554
No 406
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.18 E-value=0.059 Score=55.64 Aligned_cols=86 Identities=27% Similarity=0.402 Sum_probs=56.2
Q ss_pred cCCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc-----CHHH----hcc--ccCEEEEeCCCC
Q 046427 191 VGKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV-----SFEE----AIS--TADFISLHMPLT 257 (595)
Q Consensus 191 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~-----~l~e----ll~--~aD~V~l~~Plt 257 (595)
.|++|.|+|. |.||...++.++.+|.+|++.++.. ..+.++++|...+ ++.+ +.. ..|+|+-|+..
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~- 237 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGG- 237 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCch-
Confidence 5889999998 9999999999999999999998865 4455666665321 1211 111 36666666552
Q ss_pred hhccccccHHHHhcCCCceEEEecc
Q 046427 258 PATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 258 ~~t~~li~~~~l~~mk~gailiN~a 282 (595)
+ .-...+..|+++..++.++
T Consensus 238 ~-----~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 238 P-----AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ------CHHHHHHTEEEEEEEEEC-
T ss_pred h-----HHHHHHHhhcCCCEEEEEE
Confidence 1 1233455566666666664
No 407
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=94.18 E-value=0.23 Score=53.02 Aligned_cols=107 Identities=29% Similarity=0.372 Sum_probs=69.7
Q ss_pred eeeecCCEEEEEeCChHHHHHHHHHhcCCCEEEE--------ECCCC-cHHH----HHHcC-Cc--ccCHHHhc-cccCE
Q 046427 187 GVSLVGKTLAVMGFGKVGTEVARRAKGLGMNVIA--------HDPYA-QADR----ARATG-VG--LVSFEEAI-STADF 249 (595)
Q Consensus 187 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~--------~d~~~-~~~~----a~~~g-~~--~~~l~ell-~~aD~ 249 (595)
|.++.||++.|.|+|++|+.+|+.|...|.+|++ ||+.- ..+. ..+.+ +. ..+-++++ -.||+
T Consensus 213 g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~~~~DV 292 (419)
T 3aoe_E 213 GLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFGLEAEV 292 (419)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGGSSCSE
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhccCceE
Confidence 4478999999999999999999999999999993 34332 2221 11222 11 12223444 37999
Q ss_pred EEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 250 ISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 250 V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
++-|.. .+.|+.+....++ -.+|+..+-+.+ ..++ .+.|.+..|
T Consensus 293 liP~A~-----~n~i~~~~A~~l~-ak~V~EgAN~p~-t~~A-~~~L~~~Gi 336 (419)
T 3aoe_E 293 LVLAAR-----EGALDGDRARQVQ-AQAVVEVANFGL-NPEA-EAYLLGKGA 336 (419)
T ss_dssp EEECSC-----TTCBCHHHHTTCC-CSEEEECSTTCB-CHHH-HHHHHHHTC
T ss_pred EEeccc-----ccccccchHhhCC-ceEEEECCCCcC-CHHH-HHHHHHCCC
Confidence 998863 4566777777674 348888888776 3443 344444444
No 408
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.17 E-value=0.062 Score=55.50 Aligned_cols=88 Identities=19% Similarity=0.151 Sum_probs=58.0
Q ss_pred cCCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCCc-HHHHHHcCCcc-------cCHHHhcc-----ccCEEEEeCCC
Q 046427 191 VGKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYAQ-ADRARATGVGL-------VSFEEAIS-----TADFISLHMPL 256 (595)
Q Consensus 191 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~-------~~l~ell~-----~aD~V~l~~Pl 256 (595)
.|+++.|+|. |.||..+++.++..|.+|++.+++.. .+.+++.|... .++.+.+. ..|+|+-++..
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 4789999999 89999999999999999999987653 34455566421 12333332 36777766652
Q ss_pred ChhccccccHHHHhcCCCceEEEeccC
Q 046427 257 TPATSKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 257 t~~t~~li~~~~l~~mk~gailiN~ar 283 (595)
.+. -...+..|+++..+++++.
T Consensus 249 ~~~-----~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 249 EAA-----IEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHH-----HHHHTTSEEEEEEEEECCC
T ss_pred HHH-----HHHHHHHHhcCCEEEEEeC
Confidence 111 1334555677777777653
No 409
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=94.15 E-value=0.041 Score=56.17 Aligned_cols=87 Identities=18% Similarity=0.102 Sum_probs=67.2
Q ss_pred cCCEEEEEe-CChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCccc------C-HHHhccccCEEEEeCCCChhccc
Q 046427 191 VGKTLAVMG-FGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLV------S-FEEAISTADFISLHMPLTPATSK 262 (595)
Q Consensus 191 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~------~-l~ell~~aD~V~l~~Plt~~t~~ 262 (595)
.|.+|.|+| .|.+|...++.++.+|.+|++.+.....+.++++|+..+ + +.+.+...|+|+-|+.. +.
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~-~~--- 227 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGG-DV--- 227 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCH-HH---
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCc-HH---
Confidence 478999997 999999999999999999998875444566777887521 3 66667789999988862 21
Q ss_pred cccHHHHhcCCCceEEEeccC
Q 046427 263 MFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 263 li~~~~l~~mk~gailiN~ar 283 (595)
. ...++.++++..++.++.
T Consensus 228 -~-~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 228 -G-IQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp -H-HHHGGGEEEEEEEEECCS
T ss_pred -H-HHHHHhccCCCEEEEeCC
Confidence 2 556788999999999864
No 410
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=94.12 E-value=0.036 Score=57.77 Aligned_cols=66 Identities=24% Similarity=0.393 Sum_probs=47.9
Q ss_pred ecCCEEEEEeC-ChHHHHHHHHHhcCC--CEEEEECCCCcHHHH-----HHc-----CCcc-cCHHHhccccCEEEEeCC
Q 046427 190 LVGKTLAVMGF-GKVGTEVARRAKGLG--MNVIAHDPYAQADRA-----RAT-----GVGL-VSFEEAISTADFISLHMP 255 (595)
Q Consensus 190 l~gktvGIIGl-G~IG~~vA~~l~~~G--~~V~~~d~~~~~~~a-----~~~-----g~~~-~~l~ell~~aD~V~l~~P 255 (595)
+.+++|+|||. |.+|+.+|..+..+| .+|..||........ .+. .+.. .+..+.+++||+|+++.-
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 45689999998 999999998888777 489999986421111 111 1121 367888999999999864
No 411
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=94.07 E-value=0.045 Score=55.18 Aligned_cols=87 Identities=18% Similarity=0.275 Sum_probs=55.1
Q ss_pred CEEEEEe-CChHHHHHHHHHh-cCCCEEEE-ECCCCcHHH----HH----HcCCcc-cCHHHhccccCEEEEeCCCChhc
Q 046427 193 KTLAVMG-FGKVGTEVARRAK-GLGMNVIA-HDPYAQADR----AR----ATGVGL-VSFEEAISTADFISLHMPLTPAT 260 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~-~~G~~V~~-~d~~~~~~~----a~----~~g~~~-~~l~ell~~aD~V~l~~Plt~~t 260 (595)
.+|+|+| +|+||+.+++.+. .-++++.+ +|+..+... .. ..|+.. .++++++.++|+|+-++| ...+
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~-p~a~ 86 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTL-PEGT 86 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSC-HHHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCC-HHHH
Confidence 4899999 8999999999887 45788777 687532110 00 114432 479999999999999885 2223
Q ss_pred cccccHHHHhcCCCceEEEeccCC
Q 046427 261 SKMFNDEAFFKMKKGVRIVNVARG 284 (595)
Q Consensus 261 ~~li~~~~l~~mk~gailiN~arg 284 (595)
...+. ..++.|.-+|-...|
T Consensus 87 ~~~~~----~al~~G~~vVigTTG 106 (272)
T 4f3y_A 87 LVHLD----AALRHDVKLVIGTTG 106 (272)
T ss_dssp HHHHH----HHHHHTCEEEECCCC
T ss_pred HHHHH----HHHHcCCCEEEECCC
Confidence 32221 123445555544445
No 412
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=94.04 E-value=0.049 Score=56.56 Aligned_cols=35 Identities=34% Similarity=0.692 Sum_probs=30.6
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEE-ECCCCcH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIA-HDPYAQA 227 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~-~d~~~~~ 227 (595)
-+|||.|+|+||+.++|++..+|++|++ +||+.+.
T Consensus 8 ~kvgInGFGRIGrlv~R~~~~~~veivainDp~~d~ 43 (346)
T 3h9e_O 8 LTVGINGFGRIGRLVLRACMEKGVKVVAVNDPFIDP 43 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECTTCCH
T ss_pred eEEEEECCChHHHHHHHHHHhCCCEEEEEeCCCCCh
Confidence 3899999999999999999999999888 6876544
No 413
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=94.04 E-value=0.05 Score=51.56 Aligned_cols=48 Identities=19% Similarity=0.256 Sum_probs=38.3
Q ss_pred cEEEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEEcCC
Q 046427 522 SIILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIGVDE 571 (595)
Q Consensus 522 ~~Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~~d~ 571 (595)
..|.+..+|+||++++|+++|+++|+||...+.... .+.-.+.+.++.
T Consensus 7 ~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~--~~~f~~~~~v~~ 54 (192)
T 1u8s_A 7 LVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMF--GKEFTLLMLISG 54 (192)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEE
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeec--CCceEEEEEEec
Confidence 467778899999999999999999999999998763 234555555543
No 414
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.04 E-value=0.073 Score=54.88 Aligned_cols=46 Identities=17% Similarity=0.229 Sum_probs=38.6
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcC--CCEEEEECCCC-cHHHHHHcCCc
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGL--GMNVIAHDPYA-QADRARATGVG 236 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~-~~~~a~~~g~~ 236 (595)
.|++|.|+|.|.+|...++.++.+ |.+|++.++.. ..+.++++|..
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~ 218 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGAD 218 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCC
Confidence 688999999999999999999998 99999999765 34556666753
No 415
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=93.97 E-value=0.087 Score=57.24 Aligned_cols=113 Identities=15% Similarity=0.105 Sum_probs=68.8
Q ss_pred CCEEEEEeCChH-HHHHHHHHhc----C-CCEEEEECCCCcH-HH----HH----HcCC----cc-cCHHHhccccCEEE
Q 046427 192 GKTLAVMGFGKV-GTEVARRAKG----L-GMNVIAHDPYAQA-DR----AR----ATGV----GL-VSFEEAISTADFIS 251 (595)
Q Consensus 192 gktvGIIGlG~I-G~~vA~~l~~----~-G~~V~~~d~~~~~-~~----a~----~~g~----~~-~~l~ell~~aD~V~ 251 (595)
.++|+|||.|.. |.++|..+.. + +.+|..||..... +. .. ..+. .. .++++.+++||+|+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 458999999998 6556655543 3 6689999987532 10 01 1121 12 27889999999999
Q ss_pred EeCCCCh---hcc--------c--------------------ccc--HHHHhcCCCceEEEeccCCchhcHHHHHHHHhc
Q 046427 252 LHMPLTP---ATS--------K--------------------MFN--DEAFFKMKKGVRIVNVARGGVVDEEALVRALDS 298 (595)
Q Consensus 252 l~~Plt~---~t~--------~--------------------li~--~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~ 298 (595)
+++|... .++ + ++. .+.+....|+++++|.+---=+-..++.+....
T Consensus 108 iaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~~p~ 187 (472)
T 1u8x_X 108 AHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPN 187 (472)
T ss_dssp ECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHSTT
T ss_pred EcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhCCC
Confidence 9999622 011 0 010 123444578999999875332335555555545
Q ss_pred CCeeEE
Q 046427 299 GIISQA 304 (595)
Q Consensus 299 g~i~ga 304 (595)
.++.|.
T Consensus 188 ~rViG~ 193 (472)
T 1u8x_X 188 SKILNI 193 (472)
T ss_dssp CCEEEC
T ss_pred CCEEEe
Confidence 567665
No 416
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.95 E-value=0.052 Score=56.19 Aligned_cols=87 Identities=28% Similarity=0.277 Sum_probs=57.9
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-cHHHHHHcCCccc------CHHH----hcc--ccCEEEEeCCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-QADRARATGVGLV------SFEE----AIS--TADFISLHMPL 256 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~------~l~e----ll~--~aD~V~l~~Pl 256 (595)
.|.+|.|+|.|.||...++.++..|. +|++.|+.. ..+.++++|...+ ++.+ +.. ..|+|+-++..
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGD 245 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 47899999999999999999999999 899999876 3466777776421 2221 111 36677666553
Q ss_pred ChhccccccHHHHhcCCCceEEEecc
Q 046427 257 TPATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 257 t~~t~~li~~~~l~~mk~gailiN~a 282 (595)
.+ + -...+..++++..++.++
T Consensus 246 ~~-~----~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 246 VH-T----FAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TT-H----HHHHHHHEEEEEEEEECC
T ss_pred hH-H----HHHHHHHHhcCCEEEEec
Confidence 21 1 133455566666666664
No 417
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=93.85 E-value=0.099 Score=53.34 Aligned_cols=109 Identities=15% Similarity=0.129 Sum_probs=63.2
Q ss_pred CEEEEEe-CChHHHHHHHHHhcCCC--EEEEECC--CCcHHH--HHHc--------CCcc-cCHHHhccccCEEEEeCCC
Q 046427 193 KTLAVMG-FGKVGTEVARRAKGLGM--NVIAHDP--YAQADR--ARAT--------GVGL-VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~~~G~--~V~~~d~--~~~~~~--a~~~--------g~~~-~~l~ell~~aD~V~l~~Pl 256 (595)
.+|+|+| .|.+|+.++..+...|. ++..+|. ...... +.++ .+.. .+-.+.++.||+|+++...
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag~ 80 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI 80 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCCC
Confidence 3799999 99999999999876664 7888998 432110 1110 0111 0225679999999999864
Q ss_pred Chhcccc-----c--c----H---HHHhcCCCceEEEeccCCchhc--HHHHHHH--HhcCCeeEE
Q 046427 257 TPATSKM-----F--N----D---EAFFKMKKGVRIVNVARGGVVD--EEALVRA--LDSGIISQA 304 (595)
Q Consensus 257 t~~t~~l-----i--~----~---~~l~~mk~gailiN~arg~~vd--~~aL~~a--L~~g~i~ga 304 (595)
.. ..++ + | + +.+....+.+++++++ ..+| ...+.+. +...++.|.
T Consensus 81 ~~-~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S--NPv~~~~~~~~~~~~~p~~rviG~ 143 (303)
T 1o6z_A 81 PR-QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS--NPVDLLNRHLYEAGDRSREQVIGF 143 (303)
T ss_dssp CC-CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC--SSHHHHHHHHHHHSSSCGGGEEEC
T ss_pred CC-CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC--ChHHHHHHHHHHHcCCCHHHeeec
Confidence 32 1111 0 1 1 1233346788888863 3334 3333333 444466554
No 418
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=93.83 E-value=0.17 Score=52.79 Aligned_cols=90 Identities=27% Similarity=0.290 Sum_probs=65.1
Q ss_pred cCCEEEEEe-CChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCccc------CHHHhc---cccCEEEEeCCCChhc
Q 046427 191 VGKTLAVMG-FGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLV------SFEEAI---STADFISLHMPLTPAT 260 (595)
Q Consensus 191 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~------~l~ell---~~aD~V~l~~Plt~~t 260 (595)
.|++|.|+| .|.||...++.++.+|.+|++.+.....+.++++|...+ ++.+.+ ...|+|+-++.....+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~ 262 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTET 262 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhhh
Confidence 578999999 799999999999999999998874335566777886421 233222 3589999988743111
Q ss_pred cccccHHHHhcCCCceEEEeccCC
Q 046427 261 SKMFNDEAFFKMKKGVRIVNVARG 284 (595)
Q Consensus 261 ~~li~~~~l~~mk~gailiN~arg 284 (595)
-...+..++++..++.++..
T Consensus 263 ----~~~~~~~l~~~G~iv~~g~~ 282 (375)
T 2vn8_A 263 ----WAPDFLKKWSGATYVTLVTP 282 (375)
T ss_dssp ----HGGGGBCSSSCCEEEESCCS
T ss_pred ----hHHHHHhhcCCcEEEEeCCC
Confidence 12345678999999999754
No 419
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.81 E-value=0.059 Score=55.91 Aligned_cols=86 Identities=17% Similarity=0.252 Sum_probs=56.3
Q ss_pred cCCEEEEE-eCChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc------CHHHhcc-----ccCEEEEeCCCC
Q 046427 191 VGKTLAVM-GFGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV------SFEEAIS-----TADFISLHMPLT 257 (595)
Q Consensus 191 ~gktvGII-GlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~------~l~ell~-----~aD~V~l~~Plt 257 (595)
.|++|.|+ |.|.||..+++.++..|.+|++.+++. ..+.+++.|...+ ++.+.+. ..|+++-|+..
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~- 245 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGA- 245 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCG-
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCH-
Confidence 57899999 689999999999999999999999765 3455566665321 2222221 36666666542
Q ss_pred hhccccccHHHHhcCCCceEEEecc
Q 046427 258 PATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 258 ~~t~~li~~~~l~~mk~gailiN~a 282 (595)
+ .-...+..|+++..++.++
T Consensus 246 ~-----~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 246 A-----YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp G-----GHHHHHHTEEEEEEEEECC
T ss_pred H-----HHHHHHHHhccCCEEEEEE
Confidence 1 1133455566666666665
No 420
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=93.79 E-value=0.12 Score=57.62 Aligned_cols=91 Identities=14% Similarity=0.153 Sum_probs=62.3
Q ss_pred eeecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-------------------cH-HH----HHHc--CCcc---
Q 046427 188 VSLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-------------------QA-DR----ARAT--GVGL--- 237 (595)
Q Consensus 188 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-------------------~~-~~----a~~~--g~~~--- 237 (595)
..|.+++|.|||+|-+|..+|+.|...|. ++..+|... .. +. ..+. +++.
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~ 402 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 402 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence 46899999999999999999999999997 788887531 01 11 1111 1210
Q ss_pred ---------------------cCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCceEEEecc
Q 046427 238 ---------------------VSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 238 ---------------------~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~a 282 (595)
..++++++++|+|+.|+. +.+++.+++...... +..+|+.+
T Consensus 403 ~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatD-n~~tR~lin~~c~~~---~~plI~aa 464 (598)
T 3vh1_A 403 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 464 (598)
T ss_dssp CCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCS-BGGGTHHHHHHHHHT---TCEEEEEE
T ss_pred eccccccCcccccccccccCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHhc---CCCEEEEE
Confidence 013568889999999887 566888887765542 34566654
No 421
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=93.73 E-value=0.1 Score=54.53 Aligned_cols=102 Identities=12% Similarity=0.136 Sum_probs=62.7
Q ss_pred CEEEEEe-CChHHHH-HH----HHHhcCC-CEE----------EEECCCCc--HHHHHHcCCc--ccCHHHhccc--cCE
Q 046427 193 KTLAVMG-FGKVGTE-VA----RRAKGLG-MNV----------IAHDPYAQ--ADRARATGVG--LVSFEEAIST--ADF 249 (595)
Q Consensus 193 ktvGIIG-lG~IG~~-vA----~~l~~~G-~~V----------~~~d~~~~--~~~a~~~g~~--~~~l~ell~~--aD~ 249 (595)
.+||||| +|.||+. .+ +.++..+ ..+ .++|++.. ...+.+.|+. +.++++++++ .|+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~ 86 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDTM 86 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCCE
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCE
Confidence 3799999 9999998 66 6665433 332 37888763 3445567874 3589999976 899
Q ss_pred EEEeCCCChhccccccHHHHhcCCCceEEEeccC---CchhcHHHHHHHHhcCC
Q 046427 250 ISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVAR---GGVVDEEALVRALDSGI 300 (595)
Q Consensus 250 V~l~~Plt~~t~~li~~~~l~~mk~gailiN~ar---g~~vd~~aL~~aL~~g~ 300 (595)
|++|+|... -. .-....|+.|.-++ |-. -.+-+.++|.++.++..
T Consensus 87 V~i~tp~~~-h~----~~~~~al~~Gk~V~-~EKP~a~~~~~~~~l~~~a~~~~ 134 (383)
T 3oqb_A 87 FFDAATTQA-RP----GLLTQAINAGKHVY-CEKPIATNFEEALEVVKLANSKG 134 (383)
T ss_dssp EEECSCSSS-SH----HHHHHHHTTTCEEE-ECSCSCSSHHHHHHHHHHHHHTT
T ss_pred EEECCCchH-HH----HHHHHHHHCCCeEE-EcCCCCCCHHHHHHHHHHHHHcC
Confidence 999999522 11 11233355565444 322 12234556666655443
No 422
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=93.69 E-value=0.16 Score=52.80 Aligned_cols=83 Identities=17% Similarity=0.225 Sum_probs=48.9
Q ss_pred EEEEEeCChHHHHHHHHHhcC-CCEEEEE-CCCCcH-H-H--------------------HHHcCCccc-CHHHhccccC
Q 046427 194 TLAVMGFGKVGTEVARRAKGL-GMNVIAH-DPYAQA-D-R--------------------ARATGVGLV-SFEEAISTAD 248 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~-G~~V~~~-d~~~~~-~-~--------------------a~~~g~~~~-~l~ell~~aD 248 (595)
+|||+|+|+||+.+++.+... +++|.+. |..... . . ....++... +.++++.++|
T Consensus 4 kVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~vD 83 (343)
T 2yyy_A 4 KVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDAD 83 (343)
T ss_dssp EEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGCS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCCC
Confidence 799999999999999998765 5887765 322111 0 0 111111111 3556667899
Q ss_pred EEEEeCCCChhccccccHHHHhcCCCceEEEe
Q 046427 249 FISLHMPLTPATSKMFNDEAFFKMKKGVRIVN 280 (595)
Q Consensus 249 ~V~l~~Plt~~t~~li~~~~l~~mk~gailiN 280 (595)
+|+.|+|... +..... -..++.|+.+|.
T Consensus 84 iV~eatg~~~-s~~~a~---~~~l~aG~~VI~ 111 (343)
T 2yyy_A 84 IVVDGAPKKI-GKQNLE---NIYKPHKVKAIL 111 (343)
T ss_dssp EEEECCCTTH-HHHHHH---HTTTTTTCEEEE
T ss_pred EEEECCCccc-cHHHHH---HHHHHCCCEEEE
Confidence 9999987432 111110 134666766664
No 423
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=93.66 E-value=0.071 Score=54.15 Aligned_cols=51 Identities=20% Similarity=0.233 Sum_probs=43.3
Q ss_pred cEEEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEEcCCC
Q 046427 522 SIILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIGVDEE 572 (595)
Q Consensus 522 ~~Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~~d~~ 572 (595)
..|.+..+|+||+|+.|++.|.++|+||..++.......+.-.|.++++.+
T Consensus 8 ~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~ 58 (287)
T 3nrb_A 8 YVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIP 58 (287)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcC
Confidence 567788999999999999999999999999998755666777888877653
No 424
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=93.64 E-value=0.12 Score=53.47 Aligned_cols=107 Identities=18% Similarity=0.277 Sum_probs=64.0
Q ss_pred CEEEEEeCChHHHHHHHHHhc-------CCCEEEE-ECCCCc-------H----HHHHHcC-Cc--ccCHHHhcc--ccC
Q 046427 193 KTLAVMGFGKVGTEVARRAKG-------LGMNVIA-HDPYAQ-------A----DRARATG-VG--LVSFEEAIS--TAD 248 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~-------~G~~V~~-~d~~~~-------~----~~a~~~g-~~--~~~l~ell~--~aD 248 (595)
-+|||+|+|.||+.+++.+.. .+++|.+ .|++.. . +...+.| +. ..+.++++. +.|
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~d~~e~l~~~~iD 84 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAFSGPEDLMGEAAD 84 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBCCSGGGGTTSCCS
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccCCHHHHhcCCCCC
Confidence 379999999999999999875 3567666 455431 1 1122233 22 126677775 589
Q ss_pred EEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchh-cHHHHHHHHhcCC
Q 046427 249 FISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVV-DEEALVRALDSGI 300 (595)
Q Consensus 249 ~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~v-d~~aL~~aL~~g~ 300 (595)
+|+.|+|... ..+-.-......++.|.-+|.+..+.+. .-+.|.++.++..
T Consensus 85 vVVe~T~~~~-~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g 136 (325)
T 3ing_A 85 LLVDCTPASR-DGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNS 136 (325)
T ss_dssp EEEECCCCCS-SSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCCCcc-ccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcC
Confidence 9999998531 1100012234446778777776665553 3456666655543
No 425
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.59 E-value=0.064 Score=55.23 Aligned_cols=86 Identities=19% Similarity=0.231 Sum_probs=55.7
Q ss_pred cCCEEEEEeCC-hHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc------CHHHhc------cccCEEEEeCCC
Q 046427 191 VGKTLAVMGFG-KVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV------SFEEAI------STADFISLHMPL 256 (595)
Q Consensus 191 ~gktvGIIGlG-~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~------~l~ell------~~aD~V~l~~Pl 256 (595)
.|++|.|+|.| .||...++.++.+|.+|++.++.. ..+.++++|...+ ++.+.+ ...|+|+-|+..
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG 223 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCC
Confidence 57899999998 999999999999999999998765 4556666665321 222111 135666665542
Q ss_pred ChhccccccHHHHhcCCCceEEEecc
Q 046427 257 TPATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 257 t~~t~~li~~~~l~~mk~gailiN~a 282 (595)
+.+ ...+..++++..++.++
T Consensus 224 -~~~-----~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 224 -PDG-----NELAFSLRPNGHFLTIG 243 (340)
T ss_dssp -HHH-----HHHHHTEEEEEEEEECC
T ss_pred -hhH-----HHHHHHhcCCCEEEEEe
Confidence 111 12234566666666665
No 426
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=93.58 E-value=0.065 Score=55.21 Aligned_cols=62 Identities=6% Similarity=0.054 Sum_probs=44.7
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEE-ECCCC--cHHHH----HHcCC--c-ccCHHHhccc--cCEEEEeCC
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIA-HDPYA--QADRA----RATGV--G-LVSFEEAIST--ADFISLHMP 255 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~-~d~~~--~~~~a----~~~g~--~-~~~l~ell~~--aD~V~l~~P 255 (595)
.++||||+|.+|+..++.+ .-++++.+ +|++. ..+.+ .+.|+ . +.++++++++ .|+|++|+|
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp 76 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTV 76 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSS
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 3799999999999777766 66788775 78754 12222 22354 2 3589999975 899999998
No 427
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=93.52 E-value=0.053 Score=54.62 Aligned_cols=37 Identities=30% Similarity=0.352 Sum_probs=33.9
Q ss_pred eecCCEEEEEe-CChHHHHHHHHHhcCCCEEEEECCCC
Q 046427 189 SLVGKTLAVMG-FGKVGTEVARRAKGLGMNVIAHDPYA 225 (595)
Q Consensus 189 ~l~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~ 225 (595)
.+.||++.|+| .|-||+++++.+...|.+|+.++++.
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 47789999999 99999999999999999999998864
No 428
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=93.50 E-value=0.078 Score=46.87 Aligned_cols=97 Identities=19% Similarity=0.140 Sum_probs=66.9
Q ss_pred CEEEEEeC----ChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCc-ccCHHHhccccCEEEEeCCCChhccccccHH
Q 046427 193 KTLAVMGF----GKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVG-LVSFEEAISTADFISLHMPLTPATSKMFNDE 267 (595)
Q Consensus 193 ktvGIIGl----G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~-~~~l~ell~~aD~V~l~~Plt~~t~~li~~~ 267 (595)
|+|+|||. ++.|..+.+.|+.+|++|+..+|.... -.|.. +.++.++-. -|++++++| .+.+..++.+-
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~----i~G~~~y~sl~dlp~-vDlavi~~p-~~~v~~~v~e~ 78 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGE----VLGKTIINERPVIEG-VDTVTLYIN-PQNQLSEYNYI 78 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSE----ETTEECBCSCCCCTT-CCEEEECSC-HHHHGGGHHHH
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCc----CCCeeccCChHHCCC-CCEEEEEeC-HHHHHHHHHHH
Confidence 67999998 579999999999999999999986421 13443 347777777 999999999 45566666443
Q ss_pred HHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 268 AFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 268 ~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
. .+...+++++.+ .. ++++.+..++..+
T Consensus 79 ~--~~g~k~v~~~~G---~~-~~e~~~~a~~~Gi 106 (122)
T 3ff4_A 79 L--SLKPKRVIFNPG---TE-NEELEEILSENGI 106 (122)
T ss_dssp H--HHCCSEEEECTT---CC-CHHHHHHHHHTTC
T ss_pred H--hcCCCEEEECCC---CC-hHHHHHHHHHcCC
Confidence 2 234446666543 23 3455666665545
No 429
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.48 E-value=0.054 Score=55.56 Aligned_cols=87 Identities=18% Similarity=0.184 Sum_probs=55.7
Q ss_pred cCCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCC-cHHHH-HHcCCccc------CHHHhc-----cccCEEEEeCCC
Q 046427 191 VGKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYA-QADRA-RATGVGLV------SFEEAI-----STADFISLHMPL 256 (595)
Q Consensus 191 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a-~~~g~~~~------~l~ell-----~~aD~V~l~~Pl 256 (595)
.|++|.|+|. |.||..+++.++..|++|++.+++. ..+.+ +++|...+ ++.+.+ ...|+++-++..
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGG 228 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCc
Confidence 5789999999 9999999999999999999998765 33444 55665321 122211 135666655541
Q ss_pred ChhccccccHHHHhcCCCceEEEeccC
Q 046427 257 TPATSKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 257 t~~t~~li~~~~l~~mk~gailiN~ar 283 (595)
+ .-...+..|+++..++.++.
T Consensus 229 -~-----~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 229 -E-----ILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp -H-----HHHHHHTTEEEEEEEEECCC
T ss_pred -c-----hHHHHHHHHhhCCEEEEEee
Confidence 1 12334555666666666653
No 430
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.46 E-value=0.19 Score=51.66 Aligned_cols=87 Identities=23% Similarity=0.169 Sum_probs=63.9
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcC-CCEEEEECCCC-cHHHHHHcCCccc-----CH----HHhcc--ccCEEEEeCCCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGL-GMNVIAHDPYA-QADRARATGVGLV-----SF----EEAIS--TADFISLHMPLT 257 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~-G~~V~~~d~~~-~~~~a~~~g~~~~-----~l----~ell~--~aD~V~l~~Plt 257 (595)
.|.+|.|+|.|.+|...++.++.+ |.+|++.|+.. ..+.++++|...+ ++ .++.. ..|+|+-++...
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~~ 250 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQ 250 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCCH
Confidence 478999999999999999999987 78999998876 4566788887432 22 22222 689999988732
Q ss_pred hhccccccHHHHhcCCCceEEEecc
Q 046427 258 PATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 258 ~~t~~li~~~~l~~mk~gailiN~a 282 (595)
. + -...+..++++..++.++
T Consensus 251 ~-~----~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 251 S-T----IDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp H-H----HHHHHHHEEEEEEEEECS
T ss_pred H-H----HHHHHHHHhcCCEEEEEC
Confidence 1 2 134566788888888887
No 431
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.45 E-value=0.097 Score=53.56 Aligned_cols=45 Identities=27% Similarity=0.300 Sum_probs=36.0
Q ss_pred cCCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCC
Q 046427 191 VGKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGV 235 (595)
Q Consensus 191 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~ 235 (595)
.|+++.|.|. |.||..+++.++..|++|++.++.. ..+.+++.|.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~ 191 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF 191 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC
Confidence 5789999998 9999999999999999999998754 2233444443
No 432
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.44 E-value=0.07 Score=54.23 Aligned_cols=86 Identities=14% Similarity=0.095 Sum_probs=57.6
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCccc--CHHHhccccCEEEEeCCCChhccccccHHH
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLV--SFEEAISTADFISLHMPLTPATSKMFNDEA 268 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~--~l~ell~~aD~V~l~~Plt~~t~~li~~~~ 268 (595)
.|++|.|+|.|.+|...++.++.+|.+|++.+.....+.++++|+..+ +.+++-...|+|+-|+.. +.+ ...
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~g~-~~~-----~~~ 215 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVSASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNS-QNA-----AAL 215 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC-------------TT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECCCc-hhH-----HHH
Confidence 578999999999999999999999999999993235677777876432 222223456777766653 211 234
Q ss_pred HhcCCCceEEEecc
Q 046427 269 FFKMKKGVRIVNVA 282 (595)
Q Consensus 269 l~~mk~gailiN~a 282 (595)
+..++++..++.++
T Consensus 216 ~~~l~~~G~~v~~g 229 (315)
T 3goh_A 216 VPSLKANGHIICIQ 229 (315)
T ss_dssp GGGEEEEEEEEEEC
T ss_pred HHHhcCCCEEEEEe
Confidence 55677777777763
No 433
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.43 E-value=0.083 Score=57.66 Aligned_cols=108 Identities=14% Similarity=0.188 Sum_probs=69.8
Q ss_pred CCEEEEEeCChHHHH-HHHHHhcCCCEEEEECCCCcH--HHHHHcCCccc--CHHHhccccCEEEEe--CCC-Chhcc--
Q 046427 192 GKTLAVMGFGKVGTE-VARRAKGLGMNVIAHDPYAQA--DRARATGVGLV--SFEEAISTADFISLH--MPL-TPATS-- 261 (595)
Q Consensus 192 gktvGIIGlG~IG~~-vA~~l~~~G~~V~~~d~~~~~--~~a~~~g~~~~--~l~ell~~aD~V~l~--~Pl-t~~t~-- 261 (595)
.|+|.|||+|.+|.+ +|+.|+..|++|.++|..... +..++.|+... .-.+.+.++|+|++. +|. +|+..
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~p~~~~a 101 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADNPEIVAA 101 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTTCHHHHHH
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCCCHHHHHH
Confidence 579999999999996 899999999999999976532 33456687543 123446789999986 332 12111
Q ss_pred -----ccccHH-HHh-cCCCc-eEEEeccCCchhcHHHHHHHHhcC
Q 046427 262 -----KMFNDE-AFF-KMKKG-VRIVNVARGGVVDEEALVRALDSG 299 (595)
Q Consensus 262 -----~li~~~-~l~-~mk~g-ailiN~arg~~vd~~aL~~aL~~g 299 (595)
.++.+. .+. .|+.. .+-|-=+.|+.-...-+...|+..
T Consensus 102 ~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~ 147 (494)
T 4hv4_A 102 REARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEA 147 (494)
T ss_dssp HHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred HHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhc
Confidence 123332 232 24432 455555588886666666667654
No 434
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=93.43 E-value=0.073 Score=55.11 Aligned_cols=107 Identities=19% Similarity=0.210 Sum_probs=63.2
Q ss_pred CEEEEEeCChHHHHHHHHHhcC--------CCEEEE-ECCCCcH--H------HHH---HcCCc--cc---CHHHhc-cc
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL--------GMNVIA-HDPYAQA--D------RAR---ATGVG--LV---SFEEAI-ST 246 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~--------G~~V~~-~d~~~~~--~------~a~---~~g~~--~~---~l~ell-~~ 246 (595)
-+|||||+|.||+.+++.+... +++|.+ +|++... . ... ..++. .. ++++++ .+
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~ 86 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALARD 86 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHHSS
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhCCC
Confidence 3799999999999999988653 367654 5765421 1 011 11321 12 788887 36
Q ss_pred cCEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchh-cHHHHHHHHhcCC
Q 046427 247 ADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVV-DEEALVRALDSGI 300 (595)
Q Consensus 247 aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~v-d~~aL~~aL~~g~ 300 (595)
.|+|+.|+|.. .+.+.--.-....|+.|.-++.+....+. ..+.|.++.++..
T Consensus 87 iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~g 140 (331)
T 3c8m_A 87 FDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNN 140 (331)
T ss_dssp CSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcC
Confidence 89999999964 11111112233446677777765444443 3456666554443
No 435
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.40 E-value=0.099 Score=53.96 Aligned_cols=45 Identities=31% Similarity=0.505 Sum_probs=37.5
Q ss_pred cCCEEEEE-eCChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCC
Q 046427 191 VGKTLAVM-GFGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGV 235 (595)
Q Consensus 191 ~gktvGII-GlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~ 235 (595)
.|++|.|+ |.|.||...++.++.+|.+|++.+++. ..+.++++|.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa 196 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGA 196 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC
Confidence 68899999 799999999999999999999999865 3445555554
No 436
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.38 E-value=0.096 Score=56.14 Aligned_cols=85 Identities=15% Similarity=0.178 Sum_probs=59.8
Q ss_pred cCCEEEEEeCC----------hHHHHHHHHHhcCCCEEEEECCCCcHHHH----HHcC--------Ccc-cCHHHhcccc
Q 046427 191 VGKTLAVMGFG----------KVGTEVARRAKGLGMNVIAHDPYAQADRA----RATG--------VGL-VSFEEAISTA 247 (595)
Q Consensus 191 ~gktvGIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~a----~~~g--------~~~-~~l~ell~~a 247 (595)
.|++|+|+|+. .-...+++.|...|.+|.+|||+...... ...+ ..+ .++.+.+++|
T Consensus 312 ~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (436)
T 1mv8_A 312 DTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVASS 391 (436)
T ss_dssp SCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHHHHC
T ss_pred cCCEEEEEccccCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChhhccchhhhhcccccccccccccCCHHHHHhCC
Confidence 78999999997 46788999999999999999997422110 1111 122 3688999999
Q ss_pred CEEEEeCCCChhccccccHHHHhcCCCceEEEec
Q 046427 248 DFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNV 281 (595)
Q Consensus 248 D~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~ 281 (595)
|+|++++.- ++-+.+ + .+.|+ +.+|+|+
T Consensus 392 d~~vi~~~~-~~~~~~-~---~~~~~-~~~i~D~ 419 (436)
T 1mv8_A 392 DVLVLGNGD-ELFVDL-V---NKTPS-GKKLVDL 419 (436)
T ss_dssp SEEEECSCC-GGGHHH-H---HSCCT-TCEEEES
T ss_pred cEEEEeCCc-HHHHhh-h---HHhcC-CCEEEEC
Confidence 999999874 433322 2 34455 5788887
No 437
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=93.34 E-value=0.082 Score=54.83 Aligned_cols=86 Identities=16% Similarity=0.274 Sum_probs=52.3
Q ss_pred CEEEEEeCChHHHHHHHHHhcC---CCEEEEECCCCcHHHHH-------Hc-----------------C--Ccc---cCH
Q 046427 193 KTLAVMGFGKVGTEVARRAKGL---GMNVIAHDPYAQADRAR-------AT-----------------G--VGL---VSF 240 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~---G~~V~~~d~~~~~~~a~-------~~-----------------g--~~~---~~l 240 (595)
.+|||+|+|+||+.+.|.+... .++|.+.+...+.+... .. | +.. .+.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 80 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCCh
Confidence 3799999999999999998754 58988664322111100 00 1 111 134
Q ss_pred HHh-cc--ccCEEEEeCCCChhccccccHHHHhcCCCce--EEEeccC
Q 046427 241 EEA-IS--TADFISLHMPLTPATSKMFNDEAFFKMKKGV--RIVNVAR 283 (595)
Q Consensus 241 ~el-l~--~aD~V~l~~Plt~~t~~li~~~~l~~mk~ga--iliN~ar 283 (595)
+++ +. .+|+|+.|+|.-. ++.... ..++.|+ ++|+.+.
T Consensus 81 ~~l~w~~~~vDvV~~atg~~~-s~e~a~----~~l~aGakkvVId~~a 123 (332)
T 1hdg_O 81 SKLPWKDLGVDFVIESTGVFR-NREKAE----LHLQAGAKKVIITAPA 123 (332)
T ss_dssp GGSCHHHHTCCEEEECSSSCC-BHHHHT----HHHHTTCSEEEESSCC
T ss_pred HHCcccccCCCEEEECCccch-hHHHHH----HHHHcCCcEEEEeCCC
Confidence 444 33 7999999999543 333222 2246688 9999865
No 438
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.30 E-value=0.066 Score=55.76 Aligned_cols=86 Identities=15% Similarity=0.126 Sum_probs=55.3
Q ss_pred cCCEEEEEe-CChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc------CHHHhcc-----ccCEEEEeCCCC
Q 046427 191 VGKTLAVMG-FGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV------SFEEAIS-----TADFISLHMPLT 257 (595)
Q Consensus 191 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~------~l~ell~-----~aD~V~l~~Plt 257 (595)
.|++|.|+| .|.||...++.++.+|.+|++.++.. ..+.+++.|...+ ++.+.++ ..|+|+-|+..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~- 241 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG- 241 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCT-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCH-
Confidence 478999999 79999999999999999999998864 3345556665321 2222221 35666665542
Q ss_pred hhccccccHHHHhcCCCceEEEecc
Q 046427 258 PATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 258 ~~t~~li~~~~l~~mk~gailiN~a 282 (595)
+ .-...+..|+++..++.++
T Consensus 242 ~-----~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 242 A-----MFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp H-----HHHHHHHHEEEEEEEEECC
T ss_pred H-----HHHHHHHHHhcCCEEEEEe
Confidence 1 1123445556666666655
No 439
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.26 E-value=0.081 Score=54.23 Aligned_cols=45 Identities=22% Similarity=0.240 Sum_probs=37.6
Q ss_pred cCCEEEEEe-CChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCC
Q 046427 191 VGKTLAVMG-FGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGV 235 (595)
Q Consensus 191 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~ 235 (595)
.|++|.|+| .|.||...++.++..|.+|++.+++. ..+.+++.|.
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga 194 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGA 194 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC
Confidence 578999999 89999999999999999999999865 3345566664
No 440
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=93.10 E-value=0.072 Score=54.26 Aligned_cols=102 Identities=20% Similarity=0.233 Sum_probs=64.2
Q ss_pred EEEEEeC-ChHHHHHHHHHhcCCCE-EEEECCCCcHHHHHHcCCcc-cCHHHhcc--ccCEEEEeCCCChhccccccHHH
Q 046427 194 TLAVMGF-GKVGTEVARRAKGLGMN-VIAHDPYAQADRARATGVGL-VSFEEAIS--TADFISLHMPLTPATSKMFNDEA 268 (595)
Q Consensus 194 tvGIIGl-G~IG~~vA~~l~~~G~~-V~~~d~~~~~~~a~~~g~~~-~~l~ell~--~aD~V~l~~Plt~~t~~li~~~~ 268 (595)
++.|+|. |++|+.+++.++..|++ |...+|..... .-.|+.. .+++++.+ ..|++++++| .+.+...+.+ .
T Consensus 15 ~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~--~i~G~~vy~sl~el~~~~~~Dv~ii~vp-~~~~~~~v~e-a 90 (294)
T 2yv1_A 15 KAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQ--NVHGVPVFDTVKEAVKETDANASVIFVP-APFAKDAVFE-A 90 (294)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTC--EETTEEEESSHHHHHHHHCCCEEEECCC-HHHHHHHHHH-H
T ss_pred EEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCc--eECCEeeeCCHHHHhhcCCCCEEEEccC-HHHHHHHHHH-H
Confidence 4778899 99999999999988887 33567653111 1145543 47999998 8999999999 3444444432 2
Q ss_pred HhcCCCceEEEeccCC-chhcHHHHHHHHhcCCe
Q 046427 269 FFKMKKGVRIVNVARG-GVVDEEALVRALDSGII 301 (595)
Q Consensus 269 l~~mk~gailiN~arg-~~vd~~aL~~aL~~g~i 301 (595)
.+ .+... +|..+.| ...+++.+.++.++..+
T Consensus 91 ~~-~Gi~~-vVi~t~G~~~~~~~~l~~~A~~~gi 122 (294)
T 2yv1_A 91 ID-AGIEL-IVVITEHIPVHDTMEFVNYAEDVGV 122 (294)
T ss_dssp HH-TTCSE-EEECCSCCCHHHHHHHHHHHHHHTC
T ss_pred HH-CCCCE-EEEECCCCCHHHHHHHHHHHHHcCC
Confidence 22 22222 4444443 22345677777766544
No 441
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.08 E-value=0.078 Score=57.44 Aligned_cols=65 Identities=18% Similarity=0.267 Sum_probs=49.3
Q ss_pred CCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH-HH-HHHcCCccc-----C---HHHh-ccccCEEEEeCCC
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA-DR-ARATGVGLV-----S---FEEA-ISTADFISLHMPL 256 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~-a~~~g~~~~-----~---l~el-l~~aD~V~l~~Pl 256 (595)
.++|-|+|+|++|+.+|+.|...|.+|++.|.+... +. ..++++..+ + |+++ +++||+++.+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~ 78 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNT 78 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCC
Confidence 468999999999999999999999999999987632 22 234565321 2 4444 7889999888774
No 442
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=93.08 E-value=0.094 Score=54.36 Aligned_cols=95 Identities=19% Similarity=0.203 Sum_probs=58.9
Q ss_pred cCCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCCcHH---HHHH-cCCc------cc---CHHHhccccCEEEEeCCC
Q 046427 191 VGKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYAQAD---RARA-TGVG------LV---SFEEAISTADFISLHMPL 256 (595)
Q Consensus 191 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~---~a~~-~g~~------~~---~l~ell~~aD~V~l~~Pl 256 (595)
.+++|.|.|. |.||+.+++.|...|++|++.++..... .... .+++ .. ++.++++.+|+|+.++..
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 3678999995 9999999999998999999988765322 1111 1321 11 266778999999977654
Q ss_pred ChhccccccHHHHhcCCC-c--eEEEeccCCc
Q 046427 257 TPATSKMFNDEAFFKMKK-G--VRIVNVARGG 285 (595)
Q Consensus 257 t~~t~~li~~~~l~~mk~-g--ailiN~arg~ 285 (595)
.....+......+..++. | ..||++|...
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 311111222333333322 2 3777777653
No 443
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.06 E-value=0.079 Score=54.15 Aligned_cols=45 Identities=29% Similarity=0.405 Sum_probs=37.4
Q ss_pred cCCEEEEEe-CChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCC
Q 046427 191 VGKTLAVMG-FGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGV 235 (595)
Q Consensus 191 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~ 235 (595)
.|++|.|+| .|.||...++.++..|.+|++.++.. ..+.+++.|.
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga 186 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGA 186 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC
Confidence 578999999 89999999999999999999998765 3445556664
No 444
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=93.02 E-value=0.34 Score=52.60 Aligned_cols=104 Identities=21% Similarity=0.276 Sum_probs=67.6
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCCEEEE--------ECCCC-cHHHH----HHcC-------CcccCHHHhc-ccc
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGMNVIA--------HDPYA-QADRA----RATG-------VGLVSFEEAI-STA 247 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~--------~d~~~-~~~~a----~~~g-------~~~~~l~ell-~~a 247 (595)
.|.|+||.|-|+|++|+..|+.|...|.+|++ ||+.- +.+.. .+.| .+..+ ++++ ..|
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~-~~il~~~~ 319 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYE-GSILEVDC 319 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEEC-SCGGGSCC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeec-cccccccc
Confidence 58999999999999999999999999999987 44442 22211 1112 11111 1333 479
Q ss_pred CEEEEeCCCChhccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 248 DFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 248 D~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
|+.+-|. +.+.|+.+....++ -.+|+-.+-+.+ ..+| .+.|.+..|
T Consensus 320 DIliPcA-----~~n~I~~~na~~l~-akiV~EgAN~p~-T~eA-~~iL~~rGI 365 (501)
T 3mw9_A 320 DILIPAA-----SEKQLTKSNAPRVK-AKIIAEGANGPT-TPEA-DKIFLERNI 365 (501)
T ss_dssp SEEEECS-----SSCCBCTTTGGGCC-CSEEECCSSSCB-CHHH-HHHHHHTTC
T ss_pred eEEeecc-----ccCccCHhHHHHcC-ceEEEeCCCCcC-CHHH-HHHHHHCCC
Confidence 9888776 45677777777775 457777777764 4444 344544444
No 445
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=93.00 E-value=0.79 Score=48.55 Aligned_cols=66 Identities=30% Similarity=0.386 Sum_probs=50.1
Q ss_pred eecCCEEEEEeC-----C---hHHHHHHHHHhcCCCEEEEECCCC---cHHH-------HHHcCCc---ccCHHHhcccc
Q 046427 189 SLVGKTLAVMGF-----G---KVGTEVARRAKGLGMNVIAHDPYA---QADR-------ARATGVG---LVSFEEAISTA 247 (595)
Q Consensus 189 ~l~gktvGIIGl-----G---~IG~~vA~~l~~~G~~V~~~d~~~---~~~~-------a~~~g~~---~~~l~ell~~a 247 (595)
.|.|++|+|+|- | ++..+++..+..+|++|....|.. .++. +.+.|.. ..++++.+++|
T Consensus 188 ~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d~~eav~~a 267 (399)
T 3q98_A 188 NLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDA 267 (399)
T ss_dssp GGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTC
T ss_pred ccCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhCCC
Confidence 378999999974 4 788999999999999999988752 2221 2244643 24899999999
Q ss_pred CEEEEeC
Q 046427 248 DFISLHM 254 (595)
Q Consensus 248 D~V~l~~ 254 (595)
|+|..-+
T Consensus 268 DvVytd~ 274 (399)
T 3q98_A 268 DIVYPKS 274 (399)
T ss_dssp SEEEECC
T ss_pred CEEEecC
Confidence 9998743
No 446
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=92.99 E-value=0.065 Score=56.96 Aligned_cols=85 Identities=13% Similarity=0.150 Sum_probs=54.8
Q ss_pred CEEEEEeCChHHHHHHHHHhcCC---CEEEEECCCCcH--HHHHHc------CCc--------ccCHHHhccc--cCEEE
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLG---MNVIAHDPYAQA--DRARAT------GVG--------LVSFEEAIST--ADFIS 251 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G---~~V~~~d~~~~~--~~a~~~------g~~--------~~~l~ell~~--aD~V~ 251 (595)
++++|+|.|.||+.+++.+...| .+|.++|++... ..+.+. .+. ..++++++++ +|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 58999999999999999999887 499999987532 112221 121 1136677877 89999
Q ss_pred EeCCCChhccccccHHHHhcCCCceEEEecc
Q 046427 252 LHMPLTPATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 252 l~~Plt~~t~~li~~~~l~~mk~gailiN~a 282 (595)
.++|... ...++ . ..++.|.-+++++
T Consensus 82 n~ag~~~-~~~v~-~---a~l~~g~~vvD~a 107 (405)
T 4ina_A 82 NIALPYQ-DLTIM-E---ACLRTGVPYLDTA 107 (405)
T ss_dssp ECSCGGG-HHHHH-H---HHHHHTCCEEESS
T ss_pred ECCCccc-ChHHH-H---HHHHhCCCEEEec
Confidence 9987422 11111 1 1234566677664
No 447
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.99 E-value=0.12 Score=54.08 Aligned_cols=45 Identities=31% Similarity=0.368 Sum_probs=37.6
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCC-CEEEEECCCC-cHHHHHHcCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLG-MNVIAHDPYA-QADRARATGV 235 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G-~~V~~~d~~~-~~~~a~~~g~ 235 (595)
.|++|.|+|.|.+|...++.++.+| .+|++.++.. ..+.++++|.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa 241 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA 241 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCC
Confidence 4789999999999999999999999 6999999765 3455566665
No 448
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=92.98 E-value=0.21 Score=52.33 Aligned_cols=136 Identities=17% Similarity=0.251 Sum_probs=85.3
Q ss_pred CEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcccCHHHhccccCEEEEeCCCChhccccccHHHHhc-
Q 046427 193 KTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFK- 271 (595)
Q Consensus 193 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~- 271 (595)
.++.|+|.|.+|+++|+.++.+|++|.++|++.... + .+-++.+|-++..-| .+.+..
T Consensus 200 ~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~----------~-~~~fp~a~~v~~~~p----------~~~~~~~ 258 (362)
T 3on5_A 200 ERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQC----------E-KHFFPDADEIIVDFP----------ADFLRKF 258 (362)
T ss_dssp EEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGG----------C-GGGCTTCSEEEESCH----------HHHHHHS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEECCCcccc----------c-cccCCCceEEecCCH----------HHHHhhc
Confidence 479999999999999999999999999999865321 1 122455665555443 112222
Q ss_pred -CCCceEEEeccCCchhcHHHHHHHHhcCCeeEEEEecCCCCCCCCCcccc----cCCcEEEcC---CCCCCcHHHHHHH
Q 046427 272 -MKKGVRIVNVARGGVVDEEALVRALDSGIISQAALDVFTEEPPAKDSKLV----LHENVTVTP---HLGASTTEAQEGV 343 (595)
Q Consensus 272 -mk~gailiN~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~----~~~nvilTP---Hi~~~t~ea~~~~ 343 (595)
+.++..+|=+.++.-.|...|..+|+.. .+..|+ -+.- .....|+ ...+ +-+| .|++-|.+ .+
T Consensus 259 ~~~~~t~vvv~TH~h~~D~~~L~~aL~~~-~~YiG~--iGSr--~R~~rl~~~g~~~~r-i~~PIGL~Iga~tP~---EI 329 (362)
T 3on5_A 259 LIRPDDFVLIMTHHFQKDQEILHFLLEKE-LRYIGI--LGSK--ERTRRLLQNRKPPDH-LYSPVGLSIDAQGPE---EI 329 (362)
T ss_dssp CCCTTCEEEECCSCHHHHHHHHHHHSSSC-CSEEEE--SSCH--HHHHHHHTSCCCCTT-EESSCSCCSCCCSHH---HH
T ss_pred CCCCCeEEEEEeCCchhhHHHHHHHhcCC-CCEEEE--eCCH--HHHHHHHhcCCcHhh-eECCCCCCCCCCCHH---HH
Confidence 5677888888888888888888888774 222221 0000 0000111 0122 4555 25677774 46
Q ss_pred HHHHHHHHHHHHcCC
Q 046427 344 AIEIAEAVIGALKGE 358 (595)
Q Consensus 344 ~~~~~~~l~~~l~g~ 358 (595)
|..++-+|....++.
T Consensus 330 AvSI~AEiia~~~~~ 344 (362)
T 3on5_A 330 AISIVAQLIQLIRSR 344 (362)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCC
Confidence 677777888877776
No 449
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=92.98 E-value=0.65 Score=49.87 Aligned_cols=124 Identities=17% Similarity=0.098 Sum_probs=92.0
Q ss_pred CCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeCChHHHHHHHHHhcCCC-
Q 046427 138 HGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGM- 216 (595)
Q Consensus 138 ~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~- 216 (595)
..|.|.|+- -..+|=-+++-+++.+| ..|..|...+|.|.|.|.-|-.+|+.+...|.
T Consensus 186 ~~ipvFnDD---~qGTA~V~lAgllnAlk------------------i~gk~l~d~riV~~GAGaAGigia~ll~~~G~~ 244 (487)
T 3nv9_A 186 CDIPVWHDD---QQGTASVTLAGLLNALK------------------LVKKDIHECRMVFIGAGSSNTTCLRLIVTAGAD 244 (487)
T ss_dssp CSSCEEETT---THHHHHHHHHHHHHHHH------------------HHTCCGGGCCEEEECCSHHHHHHHHHHHHTTCC
T ss_pred ccCCccccc---cchHHHHHHHHHHHHHH------------------HhCCChhhcEEEEECCCHHHHHHHHHHHHcCCC
Confidence 389999985 45567778888888777 23567888999999999999999999999998
Q ss_pred --EEEEECCCC-----cHHH------------HHHcCC-cccCHHHhccccCEEEEeCCCChhccccccHHHHhcCCCce
Q 046427 217 --NVIAHDPYA-----QADR------------ARATGV-GLVSFEEAISTADFISLHMPLTPATSKMFNDEAFFKMKKGV 276 (595)
Q Consensus 217 --~V~~~d~~~-----~~~~------------a~~~g~-~~~~l~ell~~aD~V~l~~Plt~~t~~li~~~~l~~mk~ga 276 (595)
+++.+|+.- .... +...+- ...+|.|+++.+|+++=.- .. .-+.+.++.++.|.+..
T Consensus 245 ~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~S-~~--~pg~ft~e~V~~Ma~~P 321 (487)
T 3nv9_A 245 PKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISLS-TP--GPGVVKAEWIKSMGEKP 321 (487)
T ss_dssp GGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEECC-CS--SCCCCCHHHHHTSCSSC
T ss_pred cccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHhcCCEEEEec-cc--CCCCCCHHHHHhhcCCC
Confidence 799998751 1111 111111 2347999999999775432 11 14789999999999999
Q ss_pred EEEeccCCc
Q 046427 277 RIVNVARGG 285 (595)
Q Consensus 277 iliN~arg~ 285 (595)
+|.-.|.-.
T Consensus 322 IIFaLSNPt 330 (487)
T 3nv9_A 322 IVFCCANPV 330 (487)
T ss_dssp EEEECCSSS
T ss_pred EEEECCCCC
Confidence 999888543
No 450
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=92.94 E-value=0.35 Score=47.44 Aligned_cols=37 Identities=30% Similarity=0.403 Sum_probs=33.1
Q ss_pred eecCCEEEEEeC-Ch--HHHHHHHHHhcCCCEEEEECCCC
Q 046427 189 SLVGKTLAVMGF-GK--VGTEVARRAKGLGMNVIAHDPYA 225 (595)
Q Consensus 189 ~l~gktvGIIGl-G~--IG~~vA~~l~~~G~~V~~~d~~~ 225 (595)
++.||++.|.|. |. ||+++|+.+...|++|+..++..
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 588999999997 55 99999999999999999988764
No 451
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=92.94 E-value=0.2 Score=52.34 Aligned_cols=94 Identities=15% Similarity=0.208 Sum_probs=59.0
Q ss_pred CEEEEEe-CChHHHHHHHHHhcCC-CEEEEECCCC-c-HHHH-------HHcCCcccCHHHhccccCEEEEeCCCChhcc
Q 046427 193 KTLAVMG-FGKVGTEVARRAKGLG-MNVIAHDPYA-Q-ADRA-------RATGVGLVSFEEAISTADFISLHMPLTPATS 261 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~~~G-~~V~~~d~~~-~-~~~a-------~~~g~~~~~l~ell~~aD~V~l~~Plt~~t~ 261 (595)
.+||||| .|.+|+.+.+.|...- .++....... . .... .+.-++..+.++++.++|++++|+|... ++
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~~-s~ 92 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAGA-SY 92 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTTH-HH
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcHH-HH
Confidence 4799997 5999999999998664 4666553221 1 1111 1112222356676789999999999533 33
Q ss_pred ccccHHHHhcCCCceEEEeccCCchhcHHHHH
Q 046427 262 KMFNDEAFFKMKKGVRIVNVARGGVVDEEALV 293 (595)
Q Consensus 262 ~li~~~~l~~mk~gailiN~arg~~vd~~aL~ 293 (595)
+....+ .|+.+||.|..=-.+..+.+
T Consensus 93 -----~~~~~~-~g~~VIDlSsdfRl~~~~~y 118 (351)
T 1vkn_A 93 -----DLVREL-KGVKIIDLGADFRFDDPGVY 118 (351)
T ss_dssp -----HHHTTC-CSCEEEESSSTTTCSSHHHH
T ss_pred -----HHHHHh-CCCEEEECChhhhCCchhhh
Confidence 333445 79999999854434433333
No 452
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.91 E-value=0.12 Score=54.32 Aligned_cols=46 Identities=37% Similarity=0.437 Sum_probs=38.6
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-cHHHHHHcCCc
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-QADRARATGVG 236 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~ 236 (595)
.|++|.|+|.|.+|...++.++.+|. +|++.|+.. ..+.++++|+.
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~ 232 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE 232 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc
Confidence 47899999999999999999999999 799998765 34566777764
No 453
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=92.87 E-value=0.1 Score=55.08 Aligned_cols=92 Identities=20% Similarity=0.172 Sum_probs=60.1
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC-cHHHHHHcCCccc-----CH-HHhcc------ccCEEEEeCCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA-QADRARATGVGLV-----SF-EEAIS------TADFISLHMPL 256 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~-----~l-~ell~------~aD~V~l~~Pl 256 (595)
.|++|.|+|.|.+|...++.++.+|. +|++.|+.. ..+.++++|...+ ++ .+.+. ..|+|+-++..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~ 264 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 47899999999999999999999999 999999765 3456667775322 11 22111 46777777763
Q ss_pred Chh----------ccccccHHHHhcCCCceEEEeccC
Q 046427 257 TPA----------TSKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 257 t~~----------t~~li~~~~l~~mk~gailiN~ar 283 (595)
... .... -...+..++++..++.++-
T Consensus 265 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 265 EAHGLGDEANTETPNGA-LNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp TCBCSGGGTTSBCTTHH-HHHHHHHEEEEEEEECCSC
T ss_pred ccccccccccccccHHH-HHHHHHHHhcCCEEEEecc
Confidence 210 0001 1334566777777777653
No 454
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=92.81 E-value=0.11 Score=54.22 Aligned_cols=85 Identities=15% Similarity=0.219 Sum_probs=50.8
Q ss_pred CEEEEEe-CChHHHHHHHHHhcCC-CEEEEE-CCC-Cc-HHHHHHc-------------CCccc--CHHHhccccCEEEE
Q 046427 193 KTLAVMG-FGKVGTEVARRAKGLG-MNVIAH-DPY-AQ-ADRARAT-------------GVGLV--SFEEAISTADFISL 252 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~~~G-~~V~~~-d~~-~~-~~~a~~~-------------g~~~~--~l~ell~~aD~V~l 252 (595)
.+|||+| .|.||+.+.+.|.... +++.+. +.. .. ....... .+... +.++ +.++|+|++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~vDvVf~ 83 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDVDVVLS 83 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTCSEEEE
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCCCEEEE
Confidence 4799999 8999999999998654 677766 322 11 1111111 11121 3334 478999999
Q ss_pred eCCCChhccccccHHHHhcCCCceEEEeccC
Q 046427 253 HMPLTPATSKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 253 ~~Plt~~t~~li~~~~l~~mk~gailiN~ar 283 (595)
|+|.. .+..+.. ..++.|+.+|+.+.
T Consensus 84 atp~~-~s~~~a~----~~~~aG~~VId~s~ 109 (350)
T 2ep5_A 84 ALPNE-LAESIEL----ELVKNGKIVVSNAS 109 (350)
T ss_dssp CCCHH-HHHHHHH----HHHHTTCEEEECSS
T ss_pred CCChH-HHHHHHH----HHHHCCCEEEECCc
Confidence 99842 2332221 12456777888763
No 455
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.79 E-value=0.082 Score=54.34 Aligned_cols=35 Identities=31% Similarity=0.350 Sum_probs=32.1
Q ss_pred cCCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCC
Q 046427 191 VGKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYA 225 (595)
Q Consensus 191 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~ 225 (595)
.|+++.|+|. |.||..+++.++..|.+|++.+++.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~ 190 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSK 190 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5789999997 9999999999999999999998764
No 456
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=92.75 E-value=0.15 Score=51.78 Aligned_cols=87 Identities=20% Similarity=0.187 Sum_probs=55.2
Q ss_pred CEEEEEe-CChHHHHHHHHHh-cCCCEEEE-ECCCCcH----HHHH-----HcCCcc-cCHHHhccccCEEEEeCCCChh
Q 046427 193 KTLAVMG-FGKVGTEVARRAK-GLGMNVIA-HDPYAQA----DRAR-----ATGVGL-VSFEEAISTADFISLHMPLTPA 259 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~-~~G~~V~~-~d~~~~~----~~a~-----~~g~~~-~~l~ell~~aD~V~l~~Plt~~ 259 (595)
.+|+|+| +|+||+.+++.+. .-++++.+ +|+..+. +... ..|+.. .++++++.++|+|+-+.+ .+.
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~-p~a 100 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQ-PQA 100 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSC-HHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCC-HHH
Confidence 3799999 9999999999987 45788766 5765321 1111 234443 389999999999998775 222
Q ss_pred ccccccHHHHhcCCCceEEEeccCC
Q 046427 260 TSKMFNDEAFFKMKKGVRIVNVARG 284 (595)
Q Consensus 260 t~~li~~~~l~~mk~gailiN~arg 284 (595)
+...+ . ..++.|.-+|-...|
T Consensus 101 ~~~~~--~--~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 101 SVLYA--N--YAAQKSLIHIIGTTG 121 (288)
T ss_dssp HHHHH--H--HHHHHTCEEEECCCC
T ss_pred HHHHH--H--HHHHcCCCEEEECCC
Confidence 22211 1 124556666655555
No 457
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=92.75 E-value=0.088 Score=54.33 Aligned_cols=64 Identities=17% Similarity=0.132 Sum_probs=46.8
Q ss_pred CEEEEEe-CChHHHHHHHHHhcCC--CEEEEECCCCcHHHH---HHcCC----cc----cCHHHhccccCEEEEeCCC
Q 046427 193 KTLAVMG-FGKVGTEVARRAKGLG--MNVIAHDPYAQADRA---RATGV----GL----VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~~~G--~~V~~~d~~~~~~~a---~~~g~----~~----~~l~ell~~aD~V~l~~Pl 256 (595)
++|+|+| .|.+|..++..|...| .+|..+|.......+ .+... .. .++.+.+++||+|+++.+.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~ 86 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGV 86 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCc
Confidence 5899999 8999999999998777 789999976532211 11111 11 1467889999999999874
No 458
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.72 E-value=0.17 Score=52.39 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=37.9
Q ss_pred cCCEEEEEeCChHHHHH-HHHH-hcCCCE-EEEECCCCc----HHHHHHcCCc
Q 046427 191 VGKTLAVMGFGKVGTEV-ARRA-KGLGMN-VIAHDPYAQ----ADRARATGVG 236 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~v-A~~l-~~~G~~-V~~~d~~~~----~~~a~~~g~~ 236 (595)
.+++|.|+|.|.+|... ++.+ +.+|.+ |++.++... .+.++++|+.
T Consensus 172 ~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~ 224 (357)
T 2b5w_A 172 DPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDAT 224 (357)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCc
Confidence 34899999999999999 9999 999997 999988654 4556667753
No 459
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.65 E-value=0.12 Score=52.78 Aligned_cols=35 Identities=26% Similarity=0.269 Sum_probs=32.0
Q ss_pred cCCEEEEEe-CChHHHHHHHHHhcCCCEEEEECCCC
Q 046427 191 VGKTLAVMG-FGKVGTEVARRAKGLGMNVIAHDPYA 225 (595)
Q Consensus 191 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~ 225 (595)
.|+++.|.| .|.||..+++.++..|.+|++.+++.
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~ 175 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTA 175 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 478999999 79999999999999999999998764
No 460
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=92.64 E-value=0.1 Score=46.29 Aligned_cols=66 Identities=20% Similarity=0.304 Sum_probs=44.2
Q ss_pred CCEEEEEeCChHHHHHHHHHhcC-CCEEEEE-CCCCcHHHHHHcCCccc---CHHHhcc--ccCEEEEeCCCC
Q 046427 192 GKTLAVMGFGKVGTEVARRAKGL-GMNVIAH-DPYAQADRARATGVGLV---SFEEAIS--TADFISLHMPLT 257 (595)
Q Consensus 192 gktvGIIGlG~IG~~vA~~l~~~-G~~V~~~-d~~~~~~~a~~~g~~~~---~l~ell~--~aD~V~l~~Plt 257 (595)
.+++.|+|.|..|+.+++.++.. |+++++| |.........-.|+... ++.++++ ..|.|++++|..
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~~i~g~pV~g~~~l~~~~~~~~id~viia~~~~ 76 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDDRKKHKTTMQGITIYRPKYLERLIKKHCISTVLLAVPSA 76 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSCGGGTTCEETTEEEECGGGHHHHHHHHTCCEEEECCTTS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECCcccCCCEecCeEEECHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46899999999999999999853 8998886 65432110011233322 4555554 478999999854
No 461
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=92.63 E-value=0.083 Score=55.36 Aligned_cols=30 Identities=23% Similarity=0.443 Sum_probs=24.1
Q ss_pred EEEEEeCChHHHHHHHHHhcC----CCEEEE-ECC
Q 046427 194 TLAVMGFGKVGTEVARRAKGL----GMNVIA-HDP 223 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~----G~~V~~-~d~ 223 (595)
+|||||+|.||+.+++.++.. +++|.+ +|.
T Consensus 6 ~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 6 NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp EEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 799999999999999999864 356655 464
No 462
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=92.63 E-value=0.17 Score=48.62 Aligned_cols=67 Identities=18% Similarity=0.089 Sum_probs=47.7
Q ss_pred ecCCEEEEEe-CChHHHHHHHHHhcC--CCEEEEECCCCcHHHHHHcCCcc--------cCHHHhccccCEEEEeCCC
Q 046427 190 LVGKTLAVMG-FGKVGTEVARRAKGL--GMNVIAHDPYAQADRARATGVGL--------VSFEEAISTADFISLHMPL 256 (595)
Q Consensus 190 l~gktvGIIG-lG~IG~~vA~~l~~~--G~~V~~~d~~~~~~~a~~~g~~~--------~~l~ell~~aD~V~l~~Pl 256 (595)
..+|++.|.| .|.||+.+++.|... |++|++.++..........++.. .+++++++++|+|+.+...
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 3578999998 599999999999988 89999998864221111122221 1356778889999887754
No 463
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=92.59 E-value=0.17 Score=55.70 Aligned_cols=110 Identities=15% Similarity=0.195 Sum_probs=70.3
Q ss_pred ecCCEEEEEeCChHHHH-HHHHHhcCCCEEEEECCCCc---HHHHHHcCCccc---CHHHhccccCEEEEe--CCC-Chh
Q 046427 190 LVGKTLAVMGFGKVGTE-VARRAKGLGMNVIAHDPYAQ---ADRARATGVGLV---SFEEAISTADFISLH--MPL-TPA 259 (595)
Q Consensus 190 l~gktvGIIGlG~IG~~-vA~~l~~~G~~V~~~d~~~~---~~~a~~~g~~~~---~l~ell~~aD~V~l~--~Pl-t~~ 259 (595)
..+++|-|||.|.+|.+ +|+.|+..|++|.++|.... .+..++.|++.. +.+++..++|+|+.. +|. +|+
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~~p~ 96 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKRGMDV 96 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCTTSHH
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCCCCHH
Confidence 45789999999999997 79999999999999997642 234456687543 345666789999985 332 222
Q ss_pred cc-------ccccHHH-Hhc--CCC-ceEEEeccCCchhcHHHHHHHHhcC
Q 046427 260 TS-------KMFNDEA-FFK--MKK-GVRIVNVARGGVVDEEALVRALDSG 299 (595)
Q Consensus 260 t~-------~li~~~~-l~~--mk~-gailiN~arg~~vd~~aL~~aL~~g 299 (595)
.. .++.+.+ +.. ++. ..+-|-=+.|+.-...-+...|+..
T Consensus 97 l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~ 147 (524)
T 3hn7_A 97 IEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYA 147 (524)
T ss_dssp HHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHc
Confidence 21 2333333 332 333 2455555578886666666666643
No 464
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=92.58 E-value=0.41 Score=49.86 Aligned_cols=88 Identities=16% Similarity=0.093 Sum_probs=56.6
Q ss_pred ecCCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCccc------CHHHhcc-----ccCEEEEeCCCC
Q 046427 190 LVGKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLV------SFEEAIS-----TADFISLHMPLT 257 (595)
Q Consensus 190 l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~------~l~ell~-----~aD~V~l~~Plt 257 (595)
-.|++|.|+|. |.+|...++.++.+|.+|++.......+.++++|...+ ++.+.+. ..|+++-|+..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~- 241 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITN- 241 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCS-
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCc-
Confidence 46889999999 89999999999999999998753234566777776421 2222221 26777766652
Q ss_pred hhccccccHHHHhcC-CCceEEEecc
Q 046427 258 PATSKMFNDEAFFKM-KKGVRIVNVA 282 (595)
Q Consensus 258 ~~t~~li~~~~l~~m-k~gailiN~a 282 (595)
+.+ -...+..+ +++..++.++
T Consensus 242 ~~~----~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 242 VES----TTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp HHH----HHHHHHHSCTTCEEEEESS
T ss_pred hHH----HHHHHHHhhcCCCEEEEEe
Confidence 111 12234445 4666666664
No 465
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.57 E-value=0.064 Score=55.26 Aligned_cols=35 Identities=26% Similarity=0.497 Sum_probs=32.4
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA 225 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~ 225 (595)
.|++|.|+|.|.+|...++.++.+|. +|++.++..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~ 199 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNP 199 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 68899999999999999999999999 999999754
No 466
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=92.56 E-value=0.24 Score=53.49 Aligned_cols=113 Identities=16% Similarity=0.149 Sum_probs=70.2
Q ss_pred CEEEEEeCChH-HHHHHHHHhc----C-CCEEEEECCCC--cHHH-----HH----HcCC----cc-cCHHHhccccCEE
Q 046427 193 KTLAVMGFGKV-GTEVARRAKG----L-GMNVIAHDPYA--QADR-----AR----ATGV----GL-VSFEEAISTADFI 250 (595)
Q Consensus 193 ktvGIIGlG~I-G~~vA~~l~~----~-G~~V~~~d~~~--~~~~-----a~----~~g~----~~-~~l~ell~~aD~V 250 (595)
.+|+|||.|.. |..++..+.. + +.+|..||... .... .. ..+. .. .++.+.++.||+|
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~V 87 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFV 87 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCEE
Confidence 58999999998 7776655543 4 56899999876 3211 11 1221 11 3678899999999
Q ss_pred EEeCCCChh---cc--------cc--------------------cc--HHHHhcCCCceEEEeccCCchhcHHHHHHHHh
Q 046427 251 SLHMPLTPA---TS--------KM--------------------FN--DEAFFKMKKGVRIVNVARGGVVDEEALVRALD 297 (595)
Q Consensus 251 ~l~~Plt~~---t~--------~l--------------------i~--~~~l~~mk~gailiN~arg~~vd~~aL~~aL~ 297 (595)
++++|.... ++ ++ +. .+.+....|+++++|.+---=+-..++.+...
T Consensus 88 Vitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~~k~~p 167 (450)
T 1s6y_A 88 TTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYTK 167 (450)
T ss_dssp EECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHCC
T ss_pred EEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhCC
Confidence 999995321 11 11 10 12344567899999987543334566666654
Q ss_pred cCCeeEEE
Q 046427 298 SGIISQAA 305 (595)
Q Consensus 298 ~g~i~ga~ 305 (595)
..++.|.+
T Consensus 168 ~~rViG~c 175 (450)
T 1s6y_A 168 QEKVVGLC 175 (450)
T ss_dssp CCCEEECC
T ss_pred CCCEEEeC
Confidence 44776653
No 467
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=92.49 E-value=0.21 Score=50.42 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=31.6
Q ss_pred cCCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCC
Q 046427 191 VGKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYA 225 (595)
Q Consensus 191 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~ 225 (595)
.||+|.|.|. |.||+.+++.|...|++|++.++..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 37 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRS 37 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCC
Confidence 5789999997 9999999999999999999999865
No 468
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=92.46 E-value=0.22 Score=51.34 Aligned_cols=85 Identities=19% Similarity=0.185 Sum_probs=54.6
Q ss_pred CCEEEEE-eCChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc------CHHHhc------cccCEEEEeCCCC
Q 046427 192 GKTLAVM-GFGKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV------SFEEAI------STADFISLHMPLT 257 (595)
Q Consensus 192 gktvGII-GlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~------~l~ell------~~aD~V~l~~Plt 257 (595)
++++.|. |.|.||...++.++.+|.+|++.+++. ..+.++++|...+ ++.+.+ ...|+|+-|+..
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~- 243 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTG- 243 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCH-
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCC-
Confidence 3567665 899999999999999999999998765 4456666775321 222211 246777666542
Q ss_pred hhccccccHHHHhcCCCceEEEecc
Q 046427 258 PATSKMFNDEAFFKMKKGVRIVNVA 282 (595)
Q Consensus 258 ~~t~~li~~~~l~~mk~gailiN~a 282 (595)
+. + ...+..|+++..++.++
T Consensus 244 ~~----~-~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 244 PL----A-SAIFNAMPKRARWIIYG 263 (349)
T ss_dssp HH----H-HHHHHHSCTTCEEEECC
T ss_pred hh----H-HHHHhhhcCCCEEEEEe
Confidence 11 1 33455566666666664
No 469
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.43 E-value=0.081 Score=52.52 Aligned_cols=62 Identities=21% Similarity=0.310 Sum_probs=45.5
Q ss_pred cCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcc--------cCHHHhccc-cCEEEEeCC
Q 046427 191 VGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGL--------VSFEEAIST-ADFISLHMP 255 (595)
Q Consensus 191 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~--------~~l~ell~~-aD~V~l~~P 255 (595)
.+++|.|.|.|.||+.+++.|...|++|++.++..... ..+++. .+++++++. +|+|+-+..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPM---PAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCC---CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcccc---ccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 35789999999999999999999999999998865321 122221 134556666 999887664
No 470
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=92.42 E-value=0.21 Score=47.46 Aligned_cols=47 Identities=17% Similarity=0.164 Sum_probs=36.6
Q ss_pred cEEEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEEcC
Q 046427 522 SIILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIGVD 570 (595)
Q Consensus 522 ~~Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~~d 570 (595)
..|.+..+|+||+++.|++.|.++|.||...+.... .++-++ .+.++
T Consensus 6 ~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~-~~~f~m-~~~v~ 52 (195)
T 2nyi_A 6 FVVSVAGSDRVGIVHDFSWALKNISANVESSRMACL-GGDFAM-IVLVS 52 (195)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE-TTEEEE-EEEEE
T ss_pred EEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEE-CCeEEE-EEEEE
Confidence 456778899999999999999999999999998753 343333 44443
No 471
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=92.36 E-value=0.14 Score=48.45 Aligned_cols=37 Identities=14% Similarity=0.241 Sum_probs=32.1
Q ss_pred ccEEEEEecCCCCchhHHHhhhhcCCccccceEeeee
Q 046427 521 GSIILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRI 557 (595)
Q Consensus 521 ~~~Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~ 557 (595)
.+.|.+..+|+||+++.|++.|+++++||.+++....
T Consensus 93 ~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~ 129 (192)
T 1u8s_A 93 TVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTI 129 (192)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred eEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcc
Confidence 3566677899999999999999999999999888643
No 472
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=92.34 E-value=0.11 Score=51.44 Aligned_cols=65 Identities=15% Similarity=0.125 Sum_probs=46.7
Q ss_pred CEEEEEe-CChHHHHHHHHHhcC-CCEEEEECCCCcH-HHHHHcCCcc--------cCHHHhccccCEEEEeCCCC
Q 046427 193 KTLAVMG-FGKVGTEVARRAKGL-GMNVIAHDPYAQA-DRARATGVGL--------VSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~~~-G~~V~~~d~~~~~-~~a~~~g~~~--------~~l~ell~~aD~V~l~~Plt 257 (595)
++|.|.| .|.||+.+++.|... |.+|.+.++.... ......+++. .++.++++.+|+|+.+.+..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~ 76 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSII 76 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCC
Confidence 3688998 599999999999887 8999999876532 1112234332 13677899999999887643
No 473
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.32 E-value=0.078 Score=56.89 Aligned_cols=109 Identities=16% Similarity=0.188 Sum_probs=69.7
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcH---HHHHHcCCccc---CHHHhccccCEEEEeCCCC---hh
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQA---DRARATGVGLV---SFEEAISTADFISLHMPLT---PA 259 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---~~a~~~g~~~~---~l~ell~~aD~V~l~~Plt---~~ 259 (595)
++.+|+|.|||+|..|.+.|+.|+..|++|.++|..... .... .|++.. ...+.+..+|.|++.-... |+
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s~gi~~~~p~ 80 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASPGIALAHPS 80 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEECTTSCTTCHH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeCCCCCCCCHH
Confidence 367899999999999999999999999999999976421 2223 566542 1245666899999874322 22
Q ss_pred c-------cccccHH-HH-hcCCCceEEEeccCCchhcHHHHHHHHhc
Q 046427 260 T-------SKMFNDE-AF-FKMKKGVRIVNVARGGVVDEEALVRALDS 298 (595)
Q Consensus 260 t-------~~li~~~-~l-~~mk~gailiN~arg~~vd~~aL~~aL~~ 298 (595)
. ..++... .+ ..++...+-|-=+.|+--...-+...|++
T Consensus 81 ~~~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~ 128 (439)
T 2x5o_A 81 LSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKA 128 (439)
T ss_dssp HHHHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHh
Confidence 1 1233332 11 22454455565557887655555556654
No 474
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=92.29 E-value=0.29 Score=44.88 Aligned_cols=66 Identities=11% Similarity=0.150 Sum_probs=50.5
Q ss_pred EEEEecCCCCchhHHHhhhhcCCccccceEeeeecCCCcEEEEEEcCCCCc---HHHHHHHhcCCCcceEEEEe
Q 046427 524 ILCRQVDQPGIIGKVGSLLGDNNVNVNFMSVGRIAPQKQAVMTIGVDEEPS---REVLKKIGETPAIEEFVFLK 594 (595)
Q Consensus 524 Liv~~~D~pG~I~~I~~~L~~~~INIa~m~v~r~~~g~~al~vi~~d~~~~---~e~l~~L~~~~~v~~v~~i~ 594 (595)
|-+...|++|++..|+++|+++++||..+++... +. +.+++..... ..+.+++++++++..++.++
T Consensus 3 ~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~---g~--i~~~~~~~~~~~~~~L~~~l~~i~~~~~~~~~~ 71 (190)
T 2jhe_A 3 LEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI---GR--IYLNFAELEFESFSSLMAEIRRIAGVTDVRTVP 71 (190)
T ss_dssp EEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT---TE--EEEEECCCCHHHHHHHHHHHHHSTTEEEEEEES
T ss_pred EEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC---CE--EEEEEEeCCHHHHHHHHHHHHcCCCeeEEEEec
Confidence 4577899999999999999999999999999432 32 5566654322 26888889999988776543
No 475
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=92.27 E-value=2.6 Score=44.00 Aligned_cols=102 Identities=21% Similarity=0.202 Sum_probs=65.8
Q ss_pred hhHHhCCceEEeCCCCCchHHHHHHHHHHHHHHHchHHHHHHHHcCcccccccceeeecCCEEEEEeC-------ChHHH
Q 046427 133 SAATEHGCLVVNAPTANTIAAAEHGIALLTAMARNIAQADASVKAGKWQRNKYVGVSLVGKTLAVMGF-------GKVGT 205 (595)
Q Consensus 133 ~aa~~~gI~V~n~p~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGl-------G~IG~ 205 (595)
+.|.-..|+|.|. |.+..++ .+++=++.+.+++ | ..++.|++++++|. .++.+
T Consensus 151 ~~a~~~~vPVIN~-g~~~HPt--QaL~Dl~Ti~e~~---------G--------~~dl~g~kv~~~~~~~gd~~~~~Va~ 210 (359)
T 3kzn_A 151 SFAKYSPVPVINM-ETITHPC--QELAHALALQEHF---------G--------TPDLRGKKYVLTWTYHPKPLNTAVAN 210 (359)
T ss_dssp HHHHHCSSCEEES-SSSCCHH--HHHHHHHHHHHHH---------T--------SSCCTTCEEEEEECCCSSCCCSHHHH
T ss_pred HHHHhCCCcccCc-ccccCch--HHHHHHHHHHHHc---------C--------CccccCCeEEEEEeecCCccccchhh
Confidence 3455678999996 4443332 2233233333211 1 12588999999976 36899
Q ss_pred HHHHHHhcCCCEEEEECCCC----cHH-------HHHHcCCc--c-cCHHHhccccCEEEEeC
Q 046427 206 EVARRAKGLGMNVIAHDPYA----QAD-------RARATGVG--L-VSFEEAISTADFISLHM 254 (595)
Q Consensus 206 ~vA~~l~~~G~~V~~~d~~~----~~~-------~a~~~g~~--~-~~l~ell~~aD~V~l~~ 254 (595)
+....+..+|++|..+-|.+ ... .+.+.|.. . .++++++++||+|..-.
T Consensus 211 S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDvvyt~r 273 (359)
T 3kzn_A 211 SALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKS 273 (359)
T ss_dssp HHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEEEC
T ss_pred hhHHHHHhccccEEEEecccccCCCHHHHHHHHHHHHhhCCCcccccCHHHHhcCCeEEEEEE
Confidence 99999999999999987742 111 12333432 2 38999999999998754
No 476
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.27 E-value=0.13 Score=52.49 Aligned_cols=65 Identities=22% Similarity=0.206 Sum_probs=46.3
Q ss_pred eeecCCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcc--------cCHHHhccccCEEEEeCCCC
Q 046427 188 VSLVGKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGL--------VSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 188 ~~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~--------~~l~ell~~aD~V~l~~Plt 257 (595)
....+|+|.|.|. |.||+.+++.|...|++|++.++.... .++.. .++.++++++|+|+-+....
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~ 88 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFM 88 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----CCccEEecCcCCHHHHHHHHhCCCEEEECCccc
Confidence 4688999999997 999999999999999999999886532 22221 13667888999998776543
No 477
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=92.20 E-value=0.32 Score=49.86 Aligned_cols=97 Identities=19% Similarity=0.176 Sum_probs=60.6
Q ss_pred CEEEEEe-CChHHHHHHHHHhc---CCCEEEEECCCCc-HHHHHH---cCC--cc-----cCHHHhccccCEEEEeCCCC
Q 046427 193 KTLAVMG-FGKVGTEVARRAKG---LGMNVIAHDPYAQ-ADRARA---TGV--GL-----VSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~~---~G~~V~~~d~~~~-~~~a~~---~g~--~~-----~~l~ell~~aD~V~l~~Plt 257 (595)
++|+||| .|.+|+++|..+.. +..++..+|.... ...+.+ ... .. .+..+.+++||+|+++.+..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~~ 80 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVA 80 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCCC
Confidence 4799999 99999999999863 5568999998651 111111 111 11 14578899999999998632
Q ss_pred h---hcc-ccc--cH-------HHHhcCCCceEEEeccCCchhcHHH
Q 046427 258 P---ATS-KMF--ND-------EAFFKMKKGVRIVNVARGGVVDEEA 291 (595)
Q Consensus 258 ~---~t~-~li--~~-------~~l~~mk~gailiN~arg~~vd~~a 291 (595)
. .++ +++ |. +.+....|++++++++ ..+|.-.
T Consensus 81 rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvd~~t 125 (312)
T 3hhp_A 81 RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT--NPVNTTV 125 (312)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec--CcchhHH
Confidence 1 111 111 11 1233346788999995 4555433
No 478
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=92.15 E-value=0.19 Score=52.03 Aligned_cols=86 Identities=17% Similarity=0.246 Sum_probs=52.2
Q ss_pred EEEEEeCChHHHHHHHHHhcC-CCEEEEECCCCcHHH----H---HHc-----------------C--Ccc---cCHHHh
Q 046427 194 TLAVMGFGKVGTEVARRAKGL-GMNVIAHDPYAQADR----A---RAT-----------------G--VGL---VSFEEA 243 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d~~~~~~~----a---~~~-----------------g--~~~---~~l~el 243 (595)
+|||+|+|+||+.+.|.+... .++|.+.+.....+. . ... | +.. .+.+++
T Consensus 3 kVgI~G~G~iGr~l~R~l~~~~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~i 82 (334)
T 3cmc_O 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPENL 82 (334)
T ss_dssp EEEEESCSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGGGC
T ss_pred EEEEECCCHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCChhhc
Confidence 799999999999999998765 678877643321110 0 000 1 111 134444
Q ss_pred -cc--ccCEEEEeCCCChhccccccHHHHhcCCCce--EEEeccCC
Q 046427 244 -IS--TADFISLHMPLTPATSKMFNDEAFFKMKKGV--RIVNVARG 284 (595)
Q Consensus 244 -l~--~aD~V~l~~Plt~~t~~li~~~~l~~mk~ga--iliN~arg 284 (595)
+. .+|+|+.|+|.-. ++.... ..++.|+ ++|+.+..
T Consensus 83 ~w~~~~vDvV~~atg~~~-s~e~a~----~~l~~Gak~vVId~pa~ 123 (334)
T 3cmc_O 83 AWGEIGVDIVVESTGRFT-KREDAA----KHLEAGAKKVIISAPAK 123 (334)
T ss_dssp CTGGGTCCEEEECSSSCC-BHHHHT----HHHHTTCSEEEESSCCB
T ss_pred CcccCccCEEEECCCchh-hHHHHH----HHHHCCCCEEEEeCCCc
Confidence 33 7999999999543 333322 2245688 99997653
No 479
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=92.13 E-value=0.13 Score=49.49 Aligned_cols=68 Identities=18% Similarity=0.218 Sum_probs=48.3
Q ss_pred ecCCEEEEEe-CChHHHHHHHHHhcCCC--EEEEECCCCcH-HHHHHcCCc--------ccCHHHhccccCEEEEeCCCC
Q 046427 190 LVGKTLAVMG-FGKVGTEVARRAKGLGM--NVIAHDPYAQA-DRARATGVG--------LVSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 190 l~gktvGIIG-lG~IG~~vA~~l~~~G~--~V~~~d~~~~~-~~a~~~g~~--------~~~l~ell~~aD~V~l~~Plt 257 (595)
+.+|++.|.| .|.||+.+++.|...|. +|++.++.... ......++. ..+++++++.+|+|+.+....
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 5678999999 59999999999999999 99999876521 111111221 113566778889998887654
No 480
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=92.09 E-value=0.14 Score=52.02 Aligned_cols=37 Identities=22% Similarity=0.334 Sum_probs=32.7
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCCC
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPYA 225 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~ 225 (595)
.|++++|.|||+|.+|..+|+.|...|. ++..+|...
T Consensus 33 kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 33 KIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 5899999999999999999999998885 788888654
No 481
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=92.06 E-value=0.09 Score=54.64 Aligned_cols=88 Identities=16% Similarity=0.172 Sum_probs=54.9
Q ss_pred CEEEEEe-CChHHHHHHHHHhc-CCCEEEEECCCC---c--HHHHH----HcC---Cccc---CHHHhccccCEEEEeCC
Q 046427 193 KTLAVMG-FGKVGTEVARRAKG-LGMNVIAHDPYA---Q--ADRAR----ATG---VGLV---SFEEAISTADFISLHMP 255 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~~-~G~~V~~~d~~~---~--~~~a~----~~g---~~~~---~l~ell~~aD~V~l~~P 255 (595)
.+|+|+| .|.+|+.+.+.|.. -.+++....... . ..... -.+ .... +.+++++++|+|++|+|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p 84 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATA 84 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCC
Confidence 4799999 69999999999986 456776653211 1 11110 012 1111 45556689999999999
Q ss_pred CChhccccccHHHHhcCCCceEEEeccCCc
Q 046427 256 LTPATSKMFNDEAFFKMKKGVRIVNVARGG 285 (595)
Q Consensus 256 lt~~t~~li~~~~l~~mk~gailiN~arg~ 285 (595)
. ..++.+... .++.|+.+||.|.--
T Consensus 85 ~-~~s~~~~~~----~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 85 H-EVSHDLAPQ----FLEAGCVVFDLSGAF 109 (337)
T ss_dssp H-HHHHHHHHH----HHHTTCEEEECSSTT
T ss_pred h-HHHHHHHHH----HHHCCCEEEEcCCcc
Confidence 3 323333221 246799999998543
No 482
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.00 E-value=0.18 Score=51.88 Aligned_cols=35 Identities=29% Similarity=0.272 Sum_probs=32.2
Q ss_pred cCCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCC
Q 046427 191 VGKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYA 225 (595)
Q Consensus 191 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~ 225 (595)
.|+++.|+|. |.||..+++.++.+|.+|++.+++.
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~ 201 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSE 201 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999999 9999999999999999999998764
No 483
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=91.93 E-value=0.16 Score=51.68 Aligned_cols=102 Identities=21% Similarity=0.232 Sum_probs=63.1
Q ss_pred EEEEEeC-ChHHHHHHHHHhcCCCEE-EEECCCCcHHHHHHcCCcc-cCHHHhcc--c-cCEEEEeCCCChhccccccHH
Q 046427 194 TLAVMGF-GKVGTEVARRAKGLGMNV-IAHDPYAQADRARATGVGL-VSFEEAIS--T-ADFISLHMPLTPATSKMFNDE 267 (595)
Q Consensus 194 tvGIIGl-G~IG~~vA~~l~~~G~~V-~~~d~~~~~~~a~~~g~~~-~~l~ell~--~-aD~V~l~~Plt~~t~~li~~~ 267 (595)
++.|+|. |++|+.+++.++..|+++ ...+|..... .-.|+.. .+++++.+ . .|++++++|- +.+...+.+
T Consensus 15 ~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~g~--~i~G~~vy~sl~el~~~~~~~DvaIi~vp~-~~~~~~v~e- 90 (297)
T 2yv2_A 15 RVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGS--EVHGVPVYDSVKEALAEHPEINTSIVFVPA-PFAPDAVYE- 90 (297)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHCTTCCEEEECCCG-GGHHHHHHH-
T ss_pred EEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCc--eECCEeeeCCHHHHhhcCCCCCEEEEecCH-HHHHHHHHH-
Confidence 4677799 999999999999889883 4567653111 1246553 47999987 5 9999999993 445544433
Q ss_pred HHhcCCCceEEEeccCCc-hhcHHHHHHHHhcCCe
Q 046427 268 AFFKMKKGVRIVNVARGG-VVDEEALVRALDSGII 301 (595)
Q Consensus 268 ~l~~mk~gailiN~arg~-~vd~~aL~~aL~~g~i 301 (595)
..+ .+-.. +|..+.|= ..+++.+.++.++..+
T Consensus 91 a~~-~Gi~~-vVi~t~G~~~~~~~~l~~~A~~~gi 123 (297)
T 2yv2_A 91 AVD-AGIRL-VVVITEGIPVHDTMRFVNYARQKGA 123 (297)
T ss_dssp HHH-TTCSE-EEECCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHH-CCCCE-EEEECCCCCHHHHHHHHHHHHHcCC
Confidence 222 22221 44444431 2245677777766544
No 484
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=91.93 E-value=0.21 Score=49.87 Aligned_cols=64 Identities=25% Similarity=0.221 Sum_probs=48.2
Q ss_pred CCEEEEEeC-ChHHHHHHHHHhcCC-CEEEEECCCCcHH---HHHHcCCccc--------CHHHhccccCEEEEeCC
Q 046427 192 GKTLAVMGF-GKVGTEVARRAKGLG-MNVIAHDPYAQAD---RARATGVGLV--------SFEEAISTADFISLHMP 255 (595)
Q Consensus 192 gktvGIIGl-G~IG~~vA~~l~~~G-~~V~~~d~~~~~~---~a~~~g~~~~--------~l~ell~~aD~V~l~~P 255 (595)
.|+|.|.|. |.||+.+++.|...| ++|.+.++..... .....+++.+ ++.++++.+|+|+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 578999997 999999999999888 9999998875321 1223454321 36678889999998775
No 485
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.88 E-value=0.2 Score=53.04 Aligned_cols=66 Identities=17% Similarity=0.087 Sum_probs=51.5
Q ss_pred eecCCEEEEEeCCh----------HHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCccc-CHHHhccccCEEEEeCC
Q 046427 189 SLVGKTLAVMGFGK----------VGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLV-SFEEAISTADFISLHMP 255 (595)
Q Consensus 189 ~l~gktvGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aD~V~l~~P 255 (595)
.+.|++|+|+|+-- =...+++.|...|.+|.+|||...... ...+..++ ++++++++||+|+++..
T Consensus 306 ~~~~~~v~vlGlafK~~~~d~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~-~~~~~~~~~~~~~~~~~~d~~v~~~~ 382 (402)
T 1dlj_A 306 ESPVKVVGVYRLIMKSNSDNFRESAIKDVIDILKSKDIKIIIYEPMLNKLE-SEDQSVLVNDLENFKKQANIIVTNRY 382 (402)
T ss_dssp CCSSCEEEEECCCSSTTCSCCTTCHHHHHHHHHHTSSCEEEEECTTCSCCC-TTCCSEECCCHHHHHHHCSEEECSSC
T ss_pred CCCCCEEEEEeeeccCCCcccccChHHHHHHHHHHCCCEEEEECCCCChHH-HHcCCeecCCHHHHHhCCcEEEEecC
Confidence 58899999999853 567799999999999999999764321 11344433 68999999999999776
No 486
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=91.82 E-value=0.2 Score=50.76 Aligned_cols=105 Identities=16% Similarity=0.099 Sum_probs=70.7
Q ss_pred ecCCEEEEEeCChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCccc-CHHHhccccCEEEEeCCCCh----------
Q 046427 190 LVGKTLAVMGFGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGLV-SFEEAISTADFISLHMPLTP---------- 258 (595)
Q Consensus 190 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aD~V~l~~Plt~---------- 258 (595)
++|++|.++|-.......++.+...|++|..+.-.. +...+.|.... ++.+.++++|+|++..|...
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~--~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a 82 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQ--LDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFS 82 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTT--SSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccc--cccccccceeccchHHHHhcCCEEEeccccccCCcccccccc
Confidence 668899999999999999999999999998774211 00112233322 46778899999987554321
Q ss_pred hccccccHHHHhcCCCceEEEeccCCchhcHHHHHHHHhcCCe
Q 046427 259 ATSKMFNDEAFFKMKKGVRIVNVARGGVVDEEALVRALDSGII 301 (595)
Q Consensus 259 ~t~~li~~~~l~~mk~gailiN~arg~~vd~~aL~~aL~~g~i 301 (595)
.+...++++.++.++++.+|. +++ |..++.+++.+..+
T Consensus 83 ~~~~~~~~~~l~~~~~l~~i~----~g~-~~~d~~~~~~~~gi 120 (300)
T 2rir_A 83 NEEVVLKQDHLDRTPAHCVIF----SGI-SNAYLENIAAQAKR 120 (300)
T ss_dssp SSCEECCHHHHHTSCTTCEEE----ESS-CCHHHHHHHHHTTC
T ss_pred cCCccchHHHHhhcCCCCEEE----Eec-CCHHHHHHHHHCCC
Confidence 123347888899999988887 333 55565555555555
No 487
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=91.79 E-value=0.18 Score=50.39 Aligned_cols=64 Identities=23% Similarity=0.397 Sum_probs=46.7
Q ss_pred CCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCCc----HHHH------HHcCCccc--------CHHHhccccCEEEE
Q 046427 192 GKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYAQ----ADRA------RATGVGLV--------SFEEAISTADFISL 252 (595)
Q Consensus 192 gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~----~~~a------~~~g~~~~--------~l~ell~~aD~V~l 252 (595)
.++|.|.|. |.||+.+++.|...|++|++.++... .+.+ ...+++.+ ++.++++.+|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 468999996 99999999999999999999988642 1111 12354321 35677888898887
Q ss_pred eCC
Q 046427 253 HMP 255 (595)
Q Consensus 253 ~~P 255 (595)
+++
T Consensus 84 ~a~ 86 (308)
T 1qyc_A 84 TVG 86 (308)
T ss_dssp CCC
T ss_pred CCc
Confidence 775
No 488
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=91.77 E-value=0.16 Score=53.06 Aligned_cols=36 Identities=22% Similarity=0.392 Sum_probs=32.1
Q ss_pred eecCCEEEEEeCChHHHHHHHHHhcCCC-EEEEECCC
Q 046427 189 SLVGKTLAVMGFGKVGTEVARRAKGLGM-NVIAHDPY 224 (595)
Q Consensus 189 ~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~ 224 (595)
.|.+++|.|||+|.+|..+|+.|...|. ++..+|+.
T Consensus 115 ~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D 151 (353)
T 3h5n_A 115 KLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDND 151 (353)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 5889999999999999999999998886 78888765
No 489
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=91.72 E-value=0.11 Score=51.12 Aligned_cols=62 Identities=16% Similarity=0.235 Sum_probs=44.2
Q ss_pred EEEEEeC-ChHHHHHHHHHhcC--CCEEEEECCCCcH-HHHHHcCCcc--------cCHHHhccccCEEEEeCC
Q 046427 194 TLAVMGF-GKVGTEVARRAKGL--GMNVIAHDPYAQA-DRARATGVGL--------VSFEEAISTADFISLHMP 255 (595)
Q Consensus 194 tvGIIGl-G~IG~~vA~~l~~~--G~~V~~~d~~~~~-~~a~~~g~~~--------~~l~ell~~aD~V~l~~P 255 (595)
+|.|.|. |.||+.+++.|... |++|++.++.... ......++.. .++.++++.+|+|+.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 3678886 99999999999987 9999999876532 2222334422 136678889999987665
No 490
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=91.71 E-value=0.13 Score=48.94 Aligned_cols=65 Identities=12% Similarity=0.097 Sum_probs=46.3
Q ss_pred CEEEEEe-CChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCc---------ccCHHHhccccCEEEEeCCCCh
Q 046427 193 KTLAVMG-FGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVG---------LVSFEEAISTADFISLHMPLTP 258 (595)
Q Consensus 193 ktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~---------~~~l~ell~~aD~V~l~~Plt~ 258 (595)
++|.|.| .|.||+.+++.|...|++|++.++........ .+++ ..++.++++++|+|+.+.....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~ 75 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG 75 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC
Confidence 3688998 79999999999999999999999865321100 1221 1135567888999988876543
No 491
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=91.69 E-value=0.16 Score=50.68 Aligned_cols=65 Identities=17% Similarity=0.245 Sum_probs=46.4
Q ss_pred CCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCC-c---H-HHH------HHcCCccc--------CHHHhccccCEEE
Q 046427 192 GKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYA-Q---A-DRA------RATGVGLV--------SFEEAISTADFIS 251 (595)
Q Consensus 192 gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~---~-~~a------~~~g~~~~--------~l~ell~~aD~V~ 251 (595)
+++|.|.|. |.||+.+++.|...|++|++.++.. . . +.. ...+++.+ ++.++++.+|+|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 578999996 9999999999998899999988765 1 1 111 12354321 3566778888887
Q ss_pred EeCCC
Q 046427 252 LHMPL 256 (595)
Q Consensus 252 l~~Pl 256 (595)
.+++.
T Consensus 82 ~~a~~ 86 (307)
T 2gas_A 82 CAAGR 86 (307)
T ss_dssp ECSSS
T ss_pred ECCcc
Confidence 77663
No 492
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.68 E-value=0.18 Score=52.25 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=32.0
Q ss_pred cCCEEEEEe-CChHHHHHHHHHhcCCCEEEEECCCC
Q 046427 191 VGKTLAVMG-FGKVGTEVARRAKGLGMNVIAHDPYA 225 (595)
Q Consensus 191 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~ 225 (595)
.|+++.|.| .|.||..+++.++..|.+|++.++..
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~ 197 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQ 197 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 478999999 79999999999999999999998764
No 493
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=91.62 E-value=0.22 Score=49.98 Aligned_cols=64 Identities=16% Similarity=0.098 Sum_probs=46.5
Q ss_pred CCEEEEEe-CChHHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcc-------cCHHHhccccCEEEEeCCCC
Q 046427 192 GKTLAVMG-FGKVGTEVARRAKGLGMNVIAHDPYAQADRARATGVGL-------VSFEEAISTADFISLHMPLT 257 (595)
Q Consensus 192 gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~-------~~l~ell~~aD~V~l~~Plt 257 (595)
+++|.|.| .|.||+.+++.|...|.+|++.++...... .+ +++. .++.++++++|+|+-+....
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~~ 73 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN-DYEYRVSDYTLEDLINQLNDVDAVVHLAATR 73 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------CCEEEECCCCHHHHHHHTTTCSEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC-ceEEEEccccHHHHHHhhcCCCEEEEccccC
Confidence 47899999 699999999999999999999988742221 11 3321 13667888999998776543
No 494
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=91.51 E-value=0.25 Score=52.80 Aligned_cols=88 Identities=19% Similarity=0.181 Sum_probs=61.2
Q ss_pred ecCCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCC-cHHHHHHcCCccc-CH------------------------HH
Q 046427 190 LVGKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYA-QADRARATGVGLV-SF------------------------EE 242 (595)
Q Consensus 190 l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~-~l------------------------~e 242 (595)
-.|++|.|+|. |.||...++.++..|.+|++.++.. ..+.++++|...+ +. ++
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL 298 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence 35889999998 9999999999999999999987654 3455667776421 11 11
Q ss_pred ---hc-cccCEEEEeCCCChhccccccHHHHhcCCCceEEEeccC
Q 046427 243 ---AI-STADFISLHMPLTPATSKMFNDEAFFKMKKGVRIVNVAR 283 (595)
Q Consensus 243 ---ll-~~aD~V~l~~Plt~~t~~li~~~~l~~mk~gailiN~ar 283 (595)
+. ...|+|+-++.. + . -...+..|+++..+++++.
T Consensus 299 v~~~~g~g~Dvvid~~G~-~----~-~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 299 VVEKAGREPDIVFEHTGR-V----T-FGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHSSCCSEEEECSCH-H----H-HHHHHHHSCTTCEEEESCC
T ss_pred HHHHhCCCceEEEECCCc-h----H-HHHHHHHHhcCCEEEEEec
Confidence 11 247888877752 1 1 1345666888888888863
No 495
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.47 E-value=0.18 Score=51.96 Aligned_cols=45 Identities=33% Similarity=0.471 Sum_probs=36.2
Q ss_pred cCCEEEEEeCC-hHHHHHHHHHhcC-CCEEEEECCCC-cHHHHHHcCC
Q 046427 191 VGKTLAVMGFG-KVGTEVARRAKGL-GMNVIAHDPYA-QADRARATGV 235 (595)
Q Consensus 191 ~gktvGIIGlG-~IG~~vA~~l~~~-G~~V~~~d~~~-~~~~a~~~g~ 235 (595)
.|+++.|+|.| .||..+++.++.. |.+|++.|++. ..+.+++.|.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~ 217 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA 217 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC
Confidence 47899999999 9999999999988 99999998765 2334445553
No 496
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.42 E-value=0.14 Score=54.90 Aligned_cols=63 Identities=21% Similarity=0.165 Sum_probs=48.6
Q ss_pred cCCEEEEEeCCh----------HHHHHHHHHhcCCCEEEEECCCCcHHHHHHcCCcc-cCHHHhccccCEEEEeCC
Q 046427 191 VGKTLAVMGFGK----------VGTEVARRAKGLGMNVIAHDPYAQADRARATGVGL-VSFEEAISTADFISLHMP 255 (595)
Q Consensus 191 ~gktvGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~-~~l~ell~~aD~V~l~~P 255 (595)
.|++|+|+|+-- =...++++|++.|.+|.+|||...... -.+... .++++++++||+|++.-.
T Consensus 331 ~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~G~~V~~~DP~~~~~~--~~~~~~~~~~~~~~~~aD~iv~~~~ 404 (432)
T 3pid_A 331 KPKVVGVYRLIMKSGSDNFRASSIQGIMKRIKAKGIPVIIYEPVMQEDE--FFNSRVVRDLNAFKQEADVIISNRM 404 (432)
T ss_dssp CCSSEEEECC-----------CHHHHHHHHHHHTTCCEEEECTTCCSSE--ETTEEECCCHHHHHHHCSEEECSSC
T ss_pred cCCEEEEEeeEeCCCCcchhcChHHHHHHHHHhcCCEEEEECCCCChhh--cCCceEECCHHHHHhcCCEEEECCC
Confidence 589999999852 357799999999999999999875321 124333 389999999999998765
No 497
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=91.26 E-value=0.4 Score=49.81 Aligned_cols=45 Identities=20% Similarity=0.367 Sum_probs=37.3
Q ss_pred cCCEEEEEe-CChHHHHHHHHHhc-CCCEEEEECCCC-cHHHHHHcCC
Q 046427 191 VGKTLAVMG-FGKVGTEVARRAKG-LGMNVIAHDPYA-QADRARATGV 235 (595)
Q Consensus 191 ~gktvGIIG-lG~IG~~vA~~l~~-~G~~V~~~d~~~-~~~~a~~~g~ 235 (595)
.|++|.|+| .|.+|...++.++. .|.+|++.++.. ..+.++++|.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGa 218 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGA 218 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCC
Confidence 578999999 99999999999997 699999999865 3455666665
No 498
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=91.26 E-value=0.21 Score=51.03 Aligned_cols=35 Identities=23% Similarity=0.299 Sum_probs=31.8
Q ss_pred cCCEEEEEeC-ChHHHHHHHHHhcCCCEEEEECCCC
Q 046427 191 VGKTLAVMGF-GKVGTEVARRAKGLGMNVIAHDPYA 225 (595)
Q Consensus 191 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~ 225 (595)
.|+++.|.|. |.||..+++.++..|.+|++.++..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~ 180 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTE 180 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999995 9999999999999999999998865
No 499
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=91.25 E-value=0.24 Score=50.41 Aligned_cols=68 Identities=18% Similarity=0.278 Sum_probs=48.3
Q ss_pred eecCCEEEEEe-CChHHHHHHHHHhcCCCEEEEECCCCc--HHHHH---H-------cCCccc--------CHHHhcccc
Q 046427 189 SLVGKTLAVMG-FGKVGTEVARRAKGLGMNVIAHDPYAQ--ADRAR---A-------TGVGLV--------SFEEAISTA 247 (595)
Q Consensus 189 ~l~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~--~~~a~---~-------~g~~~~--------~l~ell~~a 247 (595)
.+.+++|.|.| .|.||+.+++.|...|.+|++.++... ..... . .+++.+ +++++++++
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 35689999999 599999999999999999999988652 11111 1 233211 256778888
Q ss_pred CEEEEeCCC
Q 046427 248 DFISLHMPL 256 (595)
Q Consensus 248 D~V~l~~Pl 256 (595)
|+|+-+...
T Consensus 102 d~Vih~A~~ 110 (351)
T 3ruf_A 102 DHVLHQAAL 110 (351)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 888776653
No 500
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=91.18 E-value=0.24 Score=51.20 Aligned_cols=31 Identities=26% Similarity=0.541 Sum_probs=25.6
Q ss_pred EEEEEeCChHHHHHHHHHhcC-CCEEEEECCC
Q 046427 194 TLAVMGFGKVGTEVARRAKGL-GMNVIAHDPY 224 (595)
Q Consensus 194 tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d~~ 224 (595)
+|||+|+|+||+.+.|.+... .++|.+.+..
T Consensus 3 kVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~ 34 (330)
T 1gad_O 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDL 34 (330)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 799999999999999998754 5788776443
Done!