BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046428
(94 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54PF8|FSLL_DICDI Frizzled and smoothened-like protein L OS=Dictyostelium discoideum
GN=fslL PE=3 SV=1
Length = 619
Score = 32.7 bits (73), Expect = 0.60, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 12 LDLRKYRIRFIDGVHAVLSVIVFAAAALRD-KNVLSCFFPTPKHETQEVLDIVPVGIGLI 70
LDL+KY I FI V V S+I A R + + C+ T K Q L +P+GI +
Sbjct: 355 LDLKKYYIPFIIIVSLVFSIIPLATKNYRMIRGNMHCWVHTTK--LQNSLFWIPLGIAIT 412
Query: 71 CSLLFV 76
+F+
Sbjct: 413 IGTIFI 418
>sp|O02827|MYLK_SHEEP Myosin light chain kinase, smooth muscle (Fragment) OS=Ovis aries
GN=MYLK PE=2 SV=1
Length = 438
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 6 HPRGEI-LDLRKYRIRFIDGVHAVLSVIVFA-AAALRDKNVLSCFFPTPKHETQEVLDIV 63
H +G + LDL+ I ++ + +I F A L + L F TP+ EV++
Sbjct: 99 HKQGIVHLDLKPENIMCVNKTGTRIKLIDFGLARRLENAGSLKVLFGTPEFVAPEVINYE 158
Query: 64 PVG-------IGLICSLL 74
P+G IG+IC +L
Sbjct: 159 PIGYATDMWSIGVICYIL 176
>sp|Q6PDN3|MYLK_MOUSE Myosin light chain kinase, smooth muscle OS=Mus musculus GN=Mylk PE=1
SV=3
Length = 1941
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 6 HPRGEI-LDLRKYRIRFIDGVHAVLSVIVFA-AAALRDKNVLSCFFPTPKHETQEVLDIV 63
H +G + LDL+ I ++ + +I F A L + L F TP+ EV++
Sbjct: 1599 HKQGIVHLDLKPENIMCVNKTGTRIKLIDFGLARRLENAGSLKVLFGTPEFVAPEVINYE 1658
Query: 64 PVG-------IGLICSLL 74
P+G IG+IC +L
Sbjct: 1659 PIGYATDMWSIGVICYIL 1676
>sp|Q15746|MYLK_HUMAN Myosin light chain kinase, smooth muscle OS=Homo sapiens GN=MYLK PE=1
SV=4
Length = 1914
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 6 HPRGEI-LDLRKYRIRFIDGVHAVLSVIVFA-AAALRDKNVLSCFFPTPKHETQEVLDIV 63
H +G + LDL+ I ++ + +I F A L + L F TP+ EV++
Sbjct: 1577 HKQGIVHLDLKPENIMCVNKTGTRIKLIDFGLARRLENAGSLKVLFGTPEFVAPEVINYE 1636
Query: 64 PVG-------IGLICSLL 74
P+G IG+IC +L
Sbjct: 1637 PIGYATDMWSIGVICYIL 1654
>sp|Q28824|MYLK_BOVIN Myosin light chain kinase, smooth muscle OS=Bos taurus GN=MYLK PE=1
SV=1
Length = 1176
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 6 HPRGEI-LDLRKYRIRFIDGVHAVLSVIVFA-AAALRDKNVLSCFFPTPKHETQEVLDIV 63
H +G + LDL+ I ++ + +I F A L + L F TP+ EV++
Sbjct: 838 HKQGIVHLDLKPENIMCVNKTGTRIKLIDFGLARRLENAGSLKVLFGTPEFVAPEVINYE 897
Query: 64 PVG-------IGLICSLL 74
P+G IG+IC +L
Sbjct: 898 PIGYATDMWSIGVICYIL 915
>sp|P47136|BUD4_YEAST Bud site selection protein 4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=BUD4 PE=1 SV=2
Length = 1447
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 45 LSCFFPTPKHETQEVLDIVPVG 66
L C + P+HE E++D VPVG
Sbjct: 1154 LKCKYEKPRHELVEIVDKVPVG 1175
>sp|A6ZQ47|BUD4_YEAS7 Bud site selection protein 4 OS=Saccharomyces cerevisiae (strain
YJM789) GN=BUD4 PE=3 SV=1
Length = 1447
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 45 LSCFFPTPKHETQEVLDIVPVG 66
L C + P+HE E++D VPVG
Sbjct: 1154 LKCKYEKPRHELVEIVDKVPVG 1175
>sp|P11799|MYLK_CHICK Myosin light chain kinase, smooth muscle OS=Gallus gallus PE=1 SV=2
Length = 1906
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 6 HPRGEI-LDLRKYRIRFIDGVHAVLSVIVFA-AAALRDKNVLSCFFPTPKHETQEVLDIV 63
H +G + LDL+ I ++ + +I F A L L F TP+ EV++
Sbjct: 1566 HKQGIVHLDLKPENIMCVNKTGTSIKLIDFGLARRLESAGSLKVLFGTPEFVAPEVINYE 1625
Query: 64 PVG-------IGLICSLL 74
P+G IG+IC +L
Sbjct: 1626 PIGYETDMWSIGVICYIL 1643
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.150 0.460
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,707,113
Number of Sequences: 539616
Number of extensions: 1320983
Number of successful extensions: 2708
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2706
Number of HSP's gapped (non-prelim): 9
length of query: 94
length of database: 191,569,459
effective HSP length: 64
effective length of query: 30
effective length of database: 157,034,035
effective search space: 4711021050
effective search space used: 4711021050
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)