Query 046438
Match_columns 851
No_of_seqs 823 out of 5298
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 21:20:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046438.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046438hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1E-69 3.5E-74 651.7 38.8 543 2-555 109-753 (768)
2 3rgz_A Protein brassinosteroid 100.0 2E-65 6.9E-70 614.5 35.5 519 9-539 92-717 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 2.3E-58 7.8E-63 548.7 39.1 530 9-543 19-626 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 9E-58 3.1E-62 543.6 38.0 516 3-525 35-631 (680)
5 3t6q_A CD180 antigen; protein- 100.0 1.4E-57 4.7E-62 534.7 33.8 503 8-524 26-568 (606)
6 3vq2_A TLR4, TOLL-like recepto 100.0 6.1E-57 2.1E-61 529.2 32.4 499 8-528 25-570 (606)
7 3t6q_A CD180 antigen; protein- 100.0 5E-56 1.7E-60 521.4 37.0 510 19-543 14-564 (606)
8 3j0a_A TOLL-like receptor 5; m 100.0 2E-55 7E-60 533.2 35.8 488 9-522 19-566 (844)
9 3vq2_A TLR4, TOLL-like recepto 100.0 5.7E-55 1.9E-59 512.5 34.1 510 18-543 12-562 (606)
10 3j0a_A TOLL-like receptor 5; m 100.0 8E-54 2.7E-58 519.2 41.5 499 20-543 7-564 (844)
11 2z63_A TOLL-like receptor 4, v 100.0 4.1E-52 1.4E-56 484.8 33.0 515 8-543 21-560 (570)
12 2z81_A CD282 antigen, TOLL-lik 100.0 1.2E-51 4.1E-56 478.4 29.3 483 8-525 19-519 (549)
13 4eco_A Uncharacterized protein 100.0 1.1E-51 3.7E-56 483.9 19.6 470 17-543 81-630 (636)
14 2z63_A TOLL-like receptor 4, v 100.0 7.4E-50 2.5E-54 465.8 32.7 510 19-543 9-535 (570)
15 2z7x_B TOLL-like receptor 1, v 100.0 3E-50 1E-54 463.1 22.6 459 63-543 21-510 (520)
16 2z81_A CD282 antigen, TOLL-lik 100.0 2.9E-49 9.9E-54 458.4 27.5 484 17-543 5-514 (549)
17 4g8a_A TOLL-like receptor 4; l 100.0 2.9E-48 9.9E-53 458.8 30.5 516 8-543 45-610 (635)
18 4ecn_A Leucine-rich repeat pro 100.0 3.1E-48 1.1E-52 460.8 29.9 459 17-517 323-865 (876)
19 4eco_A Uncharacterized protein 100.0 1.6E-49 5.4E-54 465.5 10.9 434 3-496 91-604 (636)
20 2z7x_B TOLL-like receptor 1, v 100.0 2.9E-47 9.9E-52 438.2 25.5 443 8-496 14-485 (520)
21 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.4E-47 2.9E-51 437.9 26.2 463 42-524 32-518 (562)
22 4ecn_A Leucine-rich repeat pro 100.0 7.8E-47 2.7E-51 448.8 26.1 470 41-544 323-871 (876)
23 4g8a_A TOLL-like receptor 4; l 100.0 3.1E-45 1.1E-49 432.9 34.4 524 4-543 15-584 (635)
24 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.4E-45 2.9E-49 421.1 22.0 463 60-543 28-514 (562)
25 4fih_A Serine/threonine-protei 100.0 5.4E-45 1.9E-49 385.5 17.3 199 626-830 74-273 (346)
26 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.6E-45 1.6E-49 380.1 15.9 201 626-830 32-237 (311)
27 4b9d_A Serine/threonine-protei 100.0 4.6E-45 1.6E-49 386.7 15.4 201 626-830 24-228 (350)
28 4asz_A BDNF/NT-3 growth factor 100.0 1.5E-44 5.3E-49 377.9 14.0 203 626-831 13-235 (299)
29 4fie_A Serine/threonine-protei 100.0 5.1E-44 1.8E-48 387.5 18.3 199 626-830 151-350 (423)
30 3omv_A RAF proto-oncogene seri 100.0 8E-44 2.7E-48 372.1 17.6 201 625-831 35-241 (307)
31 4aoj_A High affinity nerve gro 100.0 1.3E-43 4.3E-48 376.4 17.0 203 626-831 41-265 (329)
32 3v47_A TOLL-like receptor 5B a 100.0 3.1E-43 1.1E-47 397.7 20.7 393 67-525 14-417 (455)
33 4g3f_A NF-kappa-beta-inducing 100.0 9.3E-44 3.2E-48 375.0 14.7 199 626-833 58-262 (336)
34 3fpq_A Serine/threonine-protei 100.0 4.5E-43 1.5E-47 363.8 19.6 196 628-831 28-233 (290)
35 3hyh_A Carbon catabolite-derep 100.0 2.7E-43 9.2E-48 362.0 16.8 198 626-830 13-215 (275)
36 3ubd_A Ribosomal protein S6 ki 100.0 3.7E-44 1.3E-48 373.6 10.5 200 626-830 24-229 (304)
37 4gt4_A Tyrosine-protein kinase 100.0 2.2E-43 7.4E-48 370.9 14.9 203 626-831 26-252 (308)
38 3v47_A TOLL-like receptor 5B a 100.0 1.2E-41 4E-46 384.7 24.6 393 19-496 12-412 (455)
39 1jl5_A Outer protein YOPM; leu 100.0 3.3E-41 1.1E-45 377.4 22.9 410 11-521 5-434 (454)
40 4g31_A Eukaryotic translation 100.0 9.2E-42 3.1E-46 357.7 15.4 198 626-829 5-229 (299)
41 1jl5_A Outer protein YOPM; leu 100.0 8.8E-41 3E-45 374.0 24.2 404 62-540 10-430 (454)
42 4ase_A Vascular endothelial gr 100.0 1.1E-41 3.8E-46 364.2 14.2 214 617-833 55-294 (353)
43 3hmm_A TGF-beta receptor type- 100.0 5.2E-41 1.8E-45 354.2 16.1 200 626-829 3-220 (303)
44 4f9c_A Cell division cycle 7-r 100.0 3.8E-40 1.3E-44 355.2 17.4 202 622-832 17-252 (361)
45 3bz5_A Internalin-J, INLJ; leu 100.0 2E-39 6.8E-44 363.4 22.7 217 6-247 31-247 (457)
46 1o6v_A Internalin A; bacterial 100.0 2E-38 6.8E-43 358.5 29.6 151 332-493 239-389 (466)
47 4b99_A Mitogen-activated prote 100.0 9.6E-40 3.3E-44 355.6 17.9 201 625-830 53-266 (398)
48 3v5w_A G-protein coupled recep 100.0 1.2E-39 4.2E-44 368.4 18.8 198 626-830 189-394 (689)
49 1o6v_A Internalin A; bacterial 100.0 3E-38 1E-42 357.1 28.5 344 16-444 45-388 (466)
50 2id5_A Lingo-1, leucine rich r 100.0 4.4E-39 1.5E-43 365.6 21.7 327 186-543 33-360 (477)
51 3bz5_A Internalin-J, INLJ; leu 100.0 1.2E-38 4.2E-43 356.9 22.8 365 27-522 28-393 (457)
52 3uto_A Twitchin; kinase, muscl 100.0 6.5E-39 2.2E-43 366.9 18.2 200 626-830 157-359 (573)
53 2id5_A Lingo-1, leucine rich r 100.0 2.3E-37 7.8E-42 351.5 23.5 348 91-522 14-362 (477)
54 3o6n_A APL1; leucine-rich repe 100.0 1.3E-36 4.3E-41 335.8 22.9 335 159-543 44-378 (390)
55 4aw2_A Serine/threonine-protei 100.0 2.6E-37 9E-42 342.4 15.6 210 618-830 66-284 (437)
56 3fxz_A Serine/threonine-protei 100.0 5.8E-36 2E-40 316.9 19.9 200 625-830 19-219 (297)
57 2vd5_A DMPK protein; serine/th 100.0 1.1E-36 3.6E-41 335.2 14.6 211 617-830 52-273 (412)
58 3uim_A Brassinosteroid insensi 100.0 3.9E-36 1.3E-40 323.5 17.6 217 613-829 17-237 (326)
59 1o6l_A RAC-beta serine/threoni 100.0 7.3E-36 2.5E-40 320.7 19.0 200 626-830 5-208 (337)
60 3oja_B Anopheles plasmodium-re 100.0 1.4E-35 4.7E-40 345.5 22.4 335 159-543 50-384 (597)
61 3v8s_A RHO-associated protein 100.0 1.8E-36 6.1E-41 333.1 14.0 207 619-830 62-276 (410)
62 3zgw_A Maternal embryonic leuc 100.0 3.6E-36 1.2E-40 323.9 16.1 203 624-830 8-213 (347)
63 3fe3_A MAP/microtubule affinit 100.0 9E-36 3.1E-40 319.2 18.9 200 625-830 14-217 (328)
64 3s95_A LIMK-1, LIM domain kina 100.0 1.6E-35 5.4E-40 316.2 20.2 204 626-832 10-227 (310)
65 1ogq_A PGIP-2, polygalacturona 100.0 9.6E-36 3.3E-40 317.3 18.1 257 289-550 51-312 (313)
66 3txo_A PKC-L, NPKC-ETA, protei 100.0 6E-36 2E-40 323.6 15.6 201 625-830 22-227 (353)
67 4eqm_A Protein kinase; transfe 100.0 1.2E-35 4.1E-40 314.2 17.5 203 625-831 10-216 (294)
68 3o6n_A APL1; leucine-rich repe 100.0 3.6E-35 1.2E-39 324.1 21.4 153 336-520 226-378 (390)
69 2c30_A Serine/threonine-protei 100.0 3.6E-35 1.2E-39 314.4 20.5 211 614-830 23-244 (321)
70 4dc2_A Protein kinase C IOTA t 100.0 1.2E-35 4.2E-40 324.5 17.2 201 625-830 51-256 (396)
71 2qkw_B Protein kinase; three-h 100.0 6.9E-36 2.4E-40 320.6 14.6 214 616-832 29-246 (321)
72 1fot_A TPK1 delta, CAMP-depend 100.0 3E-35 1E-39 313.7 18.8 197 626-830 6-206 (318)
73 1xjd_A Protein kinase C, theta 100.0 2.1E-35 7.1E-40 318.0 17.5 203 623-830 14-221 (345)
74 2yab_A Death-associated protei 100.0 4.4E-35 1.5E-39 317.5 19.7 200 625-830 11-221 (361)
75 4fr4_A YANK1, serine/threonine 100.0 4.1E-35 1.4E-39 319.4 19.4 199 626-830 15-220 (384)
76 1tki_A Titin; serine kinase, m 100.0 3.2E-35 1.1E-39 314.4 18.2 200 625-830 4-206 (321)
77 3niz_A Rhodanese family protei 100.0 3.9E-35 1.3E-39 312.8 18.7 204 624-832 19-225 (311)
78 3a8x_A Protein kinase C IOTA t 100.0 3.8E-35 1.3E-39 316.7 18.5 199 626-829 9-212 (345)
79 4hcu_A Tyrosine-protein kinase 100.0 1.7E-35 5.9E-40 309.0 14.5 201 626-830 10-211 (269)
80 2i0e_A Protein kinase C-beta I 100.0 4.6E-35 1.6E-39 316.3 17.8 201 625-830 19-224 (353)
81 4fmz_A Internalin; leucine ric 100.0 4.6E-34 1.6E-38 310.2 25.4 307 13-397 40-346 (347)
82 1kob_A Twitchin; kinase, intra 100.0 8.3E-35 2.8E-39 318.2 19.6 201 625-830 50-253 (387)
83 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.8E-35 1.3E-39 320.7 16.5 203 624-832 63-290 (365)
84 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.7E-35 1.3E-39 306.4 15.6 203 625-831 7-210 (268)
85 3tki_A Serine/threonine-protei 100.0 4.1E-35 1.4E-39 314.1 16.3 213 625-841 6-222 (323)
86 4fmz_A Internalin; leucine ric 100.0 6.2E-34 2.1E-38 309.2 25.7 308 155-516 39-346 (347)
87 3p86_A Serine/threonine-protei 100.0 7.3E-35 2.5E-39 310.1 17.4 203 624-831 35-243 (309)
88 1rdq_E PKA C-alpha, CAMP-depen 100.0 8.1E-35 2.8E-39 314.5 17.7 197 626-830 41-241 (350)
89 2psq_A Fibroblast growth facto 100.0 9.2E-35 3.1E-39 317.3 18.3 204 625-831 80-310 (370)
90 2bdw_A Hypothetical protein K1 100.0 1.4E-34 4.9E-39 314.6 19.1 201 624-830 27-233 (362)
91 3c0i_A Peripheral plasma membr 100.0 1.4E-34 4.7E-39 313.9 18.8 201 625-829 23-235 (351)
92 1ob3_A PFPK5, cell division co 100.0 7.5E-35 2.6E-39 307.3 16.2 200 626-830 2-204 (288)
93 3h4j_B AMPK kdaid, SNF1-like p 100.0 1E-34 3.5E-39 311.3 17.2 198 626-830 9-211 (336)
94 3soa_A Calcium/calmodulin-depe 100.0 1.9E-34 6.4E-39 320.9 19.8 202 624-830 9-216 (444)
95 3a62_A Ribosomal protein S6 ki 100.0 8.4E-35 2.9E-39 312.4 16.3 201 625-830 16-224 (327)
96 3kul_A Ephrin type-A receptor 100.0 9.3E-35 3.2E-39 311.8 16.5 202 626-830 49-258 (325)
97 2y0a_A Death-associated protei 100.0 2.3E-34 7.7E-39 308.9 19.0 200 625-830 10-220 (326)
98 3gen_A Tyrosine-protein kinase 100.0 7.5E-35 2.6E-39 306.7 14.9 202 625-830 23-225 (283)
99 2r5t_A Serine/threonine-protei 100.0 7.8E-35 2.7E-39 316.8 15.3 200 626-830 38-242 (373)
100 2acx_A G protein-coupled recep 100.0 1.9E-34 6.5E-39 326.5 18.7 202 625-831 183-389 (576)
101 3o0g_A Cell division protein k 100.0 2.3E-34 7.9E-39 304.3 17.8 199 626-829 2-204 (292)
102 3oja_B Anopheles plasmodium-re 100.0 5.6E-34 1.9E-38 331.9 22.2 311 87-494 50-360 (597)
103 2izr_A Casein kinase I isoform 100.0 1.4E-34 4.7E-39 311.7 15.8 201 625-831 8-221 (330)
104 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.2E-34 1.1E-38 324.3 19.5 201 626-830 185-392 (543)
105 2w4o_A Calcium/calmodulin-depe 100.0 2E-34 7E-39 312.1 16.6 201 624-832 51-255 (349)
106 4euu_A Serine/threonine-protei 100.0 2.6E-34 8.9E-39 308.1 17.2 201 625-830 8-226 (319)
107 2x4f_A Myosin light chain kina 100.0 2.1E-34 7.3E-39 314.3 16.6 195 631-830 94-291 (373)
108 3soc_A Activin receptor type-2 100.0 2E-34 6.8E-39 309.1 16.1 200 625-831 23-242 (322)
109 2qol_A Ephrin receptor; recept 100.0 1.8E-34 6.2E-39 315.2 15.3 202 626-830 45-254 (373)
110 2pmi_A Negative RE, cyclin-dep 100.0 3.1E-34 1.1E-38 306.9 16.6 201 625-830 4-212 (317)
111 2zv2_A Calcium/calmodulin-depe 100.0 4.8E-34 1.7E-38 302.8 17.9 199 625-829 12-242 (298)
112 3ork_A Serine/threonine protei 100.0 7.7E-35 2.6E-39 310.8 11.7 203 625-831 11-223 (311)
113 3ugc_A Tyrosine-protein kinase 100.0 1.9E-34 6.6E-39 305.5 14.6 202 625-829 9-219 (295)
114 3t9t_A Tyrosine-protein kinase 100.0 2.6E-34 8.8E-39 299.8 14.7 201 626-830 8-209 (267)
115 3gni_B Strad alpha; kinase fol 100.0 1E-33 3.5E-38 312.2 20.2 205 625-832 24-242 (389)
116 2y94_A 5'-AMP-activated protei 100.0 7.1E-34 2.4E-38 318.1 18.2 199 626-830 16-219 (476)
117 3cok_A Serine/threonine-protei 100.0 9E-34 3.1E-38 297.6 17.9 202 625-830 10-215 (278)
118 1mp8_A Focal adhesion kinase 1 100.0 3.5E-34 1.2E-38 301.1 14.5 203 625-831 14-222 (281)
119 3cbl_A C-FES, proto-oncogene t 100.0 1.3E-34 4.5E-39 317.3 11.5 203 625-830 113-319 (377)
120 4ejn_A RAC-alpha serine/threon 100.0 2.7E-34 9.2E-39 322.4 14.3 201 625-830 147-352 (446)
121 3kn6_A Ribosomal protein S6 ki 100.0 1.1E-33 3.7E-38 303.4 17.8 191 632-830 17-212 (325)
122 3lb7_A RAF proto-oncogene seri 100.0 6.9E-34 2.4E-38 302.4 16.2 201 625-831 35-241 (307)
123 1csn_A Casein kinase-1; phosph 100.0 1.5E-33 5.3E-38 299.1 18.8 201 625-831 9-222 (298)
124 3qd2_B Eukaryotic translation 100.0 9.2E-34 3.1E-38 305.9 17.3 202 625-829 5-278 (332)
125 3uc3_A Serine/threonine-protei 100.0 5.7E-34 1.9E-38 309.9 15.4 200 625-831 19-222 (361)
126 3f3z_A Calcium/calmodulin-depe 100.0 1.3E-33 4.5E-38 296.2 17.6 200 624-830 7-210 (277)
127 3vhe_A Vascular endothelial gr 100.0 3.2E-34 1.1E-38 313.1 13.0 214 616-832 12-301 (359)
128 3ttj_A Mitogen-activated prote 100.0 6.6E-34 2.3E-38 319.2 15.8 197 625-830 61-266 (464)
129 3p1a_A MYT1 kinase, membrane-a 100.0 1.3E-33 4.5E-38 301.1 17.3 198 625-829 56-257 (311)
130 2nru_A Interleukin-1 receptor- 100.0 4.3E-33 1.5E-37 297.0 21.1 213 614-831 13-238 (307)
131 2eva_A TAK1 kinase - TAB1 chim 100.0 1.8E-33 6.1E-38 299.5 18.1 197 626-831 8-207 (307)
132 3oz6_A Mitogen-activated prote 100.0 1.3E-33 4.3E-38 311.3 17.5 201 624-830 7-234 (388)
133 2a2a_A Death-associated protei 100.0 1.8E-33 6.2E-38 301.7 18.3 200 625-830 11-221 (321)
134 3llt_A Serine/threonine kinase 100.0 9.5E-34 3.3E-38 309.3 16.3 208 614-830 23-262 (360)
135 3q4u_A Activin receptor type-1 100.0 1.4E-33 4.9E-38 299.8 17.0 204 625-834 7-240 (301)
136 1nxk_A MAP kinase-activated pr 100.0 1.9E-33 6.6E-38 309.9 18.5 196 626-831 61-267 (400)
137 3hko_A Calcium/calmodulin-depe 100.0 7.9E-34 2.7E-38 308.1 15.0 208 621-831 21-280 (345)
138 1u5q_A Serine/threonine protei 100.0 1.5E-33 5.1E-38 304.8 17.1 196 626-830 54-256 (348)
139 1qcf_A Haematopoetic cell kina 100.0 4.9E-34 1.7E-38 320.6 13.7 201 625-830 187-389 (454)
140 3tt0_A Basic fibroblast growth 100.0 1.8E-33 6.3E-38 309.0 17.8 203 625-830 68-297 (382)
141 3dbq_A Dual specificity protei 100.0 9.9E-34 3.4E-38 306.5 15.3 202 625-832 8-225 (343)
142 2yex_A Serine/threonine-protei 100.0 2.6E-33 9E-38 293.7 18.1 214 625-842 6-223 (276)
143 1luf_A Muscle-specific tyrosin 100.0 9.5E-34 3.2E-38 307.3 15.1 204 624-830 45-280 (343)
144 3g33_A Cell division protein k 100.0 1.9E-33 6.6E-38 299.7 17.1 201 624-830 7-222 (308)
145 3mtl_A Cell division protein k 100.0 5.4E-34 1.9E-38 306.0 12.9 200 626-830 2-204 (324)
146 3op5_A Serine/threonine-protei 100.0 8.4E-34 2.9E-38 309.8 14.4 202 625-830 34-264 (364)
147 3dls_A PAS domain-containing s 100.0 7.1E-34 2.4E-38 306.0 13.4 200 624-829 22-232 (335)
148 1vzo_A Ribosomal protein S6 ki 100.0 7.6E-34 2.6E-38 308.6 13.8 201 626-830 54-265 (355)
149 3kk8_A Calcium/calmodulin depe 100.0 4.7E-33 1.6E-37 293.1 19.4 201 624-830 4-210 (284)
150 2zmd_A Dual specificity protei 100.0 2E-33 6.8E-38 308.8 17.1 200 626-831 56-271 (390)
151 4agu_A Cyclin-dependent kinase 100.0 2.1E-33 7.2E-38 300.0 16.6 201 626-831 3-207 (311)
152 3l9p_A Anaplastic lymphoma kin 100.0 6.2E-34 2.1E-38 310.6 12.5 203 625-830 70-290 (367)
153 3fdn_A Serine/threonine-protei 100.0 3E-33 1E-37 293.7 17.3 199 625-830 8-210 (279)
154 3pfq_A PKC-B, PKC-beta, protei 100.0 2.4E-33 8.1E-38 328.4 18.2 202 624-830 339-545 (674)
155 2qr7_A Ribosomal protein S6 ki 100.0 8.7E-34 3E-38 305.6 13.4 198 624-830 20-223 (342)
156 2h34_A Serine/threonine-protei 100.0 2.7E-33 9.1E-38 298.5 17.0 202 625-830 33-238 (309)
157 1opk_A P150, C-ABL, proto-onco 100.0 8.8E-34 3E-38 321.5 13.9 203 625-831 219-424 (495)
158 4f0f_A Serine/threonine-protei 100.0 3.2E-33 1.1E-37 294.8 17.4 201 625-834 18-235 (287)
159 3poz_A Epidermal growth factor 100.0 1.2E-33 4.2E-38 303.6 14.3 202 626-831 15-224 (327)
160 3og7_A AKAP9-BRAF fusion prote 100.0 1.5E-33 5.1E-38 297.5 14.6 203 624-832 22-230 (289)
161 2eue_A Carbon catabolite derep 100.0 2.6E-33 8.8E-38 293.5 16.1 198 626-830 13-215 (275)
162 3cc6_A Protein tyrosine kinase 100.0 2.1E-33 7.1E-38 295.3 15.5 202 625-830 11-218 (281)
163 3kfa_A Tyrosine-protein kinase 100.0 1.4E-33 4.8E-38 297.8 14.1 203 624-830 11-216 (288)
164 3pg1_A Mitogen-activated prote 100.0 3.1E-33 1.1E-37 305.4 17.3 209 616-830 12-237 (362)
165 1rjb_A FL cytokine receptor; k 100.0 2.1E-33 7.2E-38 304.6 15.8 205 624-831 43-279 (344)
166 4fvq_A Tyrosine-protein kinase 100.0 1.1E-33 3.7E-38 298.8 13.1 195 625-827 7-218 (289)
167 3i6u_A CDS1, serine/threonine- 100.0 3.1E-33 1.1E-37 310.4 17.2 203 623-832 132-349 (419)
168 2ivs_A Proto-oncogene tyrosine 100.0 2.2E-33 7.4E-38 300.4 15.4 204 625-831 22-257 (314)
169 2ac3_A MAP kinase-interacting 100.0 2.6E-33 9E-38 300.0 16.0 203 625-831 11-230 (316)
170 3qup_A Tyrosine-protein kinase 100.0 1.7E-33 5.9E-38 302.4 14.5 205 624-831 21-244 (323)
171 3is5_A Calcium-dependent prote 100.0 3.2E-33 1.1E-37 294.3 16.2 200 625-830 21-228 (285)
172 2ft3_A Biglycan; proteoglycan, 100.0 9.7E-33 3.3E-37 297.4 20.3 136 337-490 194-331 (332)
173 1qpc_A LCK kinase; alpha beta 100.0 1.8E-33 6.1E-38 295.5 14.1 201 625-830 12-214 (279)
174 1k9a_A Carboxyl-terminal SRC k 100.0 3.6E-33 1.2E-37 312.9 17.3 197 625-831 192-391 (450)
175 2rku_A Serine/threonine-protei 100.0 6.9E-33 2.3E-37 293.4 18.5 201 625-830 14-218 (294)
176 1ua2_A CAK, cell division prot 100.0 2.3E-33 8E-38 304.0 15.1 203 623-830 7-216 (346)
177 3n9x_A Phosphotransferase; mal 100.0 5.5E-33 1.9E-37 310.0 18.5 200 625-829 25-254 (432)
178 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.3E-33 4.3E-38 316.8 13.3 201 625-830 183-385 (452)
179 4eut_A Serine/threonine-protei 100.0 1.1E-33 3.6E-38 312.3 12.4 201 625-830 8-226 (396)
180 1z7x_W Ribonuclease inhibitor; 100.0 5.3E-36 1.8E-40 339.0 -6.2 383 88-517 3-441 (461)
181 2y7j_A Phosphorylase B kinase 100.0 6.6E-33 2.3E-37 302.2 18.5 207 617-829 85-307 (365)
182 1ogq_A PGIP-2, polygalacturona 100.0 3.7E-33 1.3E-37 297.3 16.0 255 262-520 50-308 (313)
183 3rp9_A Mitogen-activated prote 100.0 3.6E-33 1.2E-37 314.6 16.9 194 625-823 52-280 (458)
184 3kmu_A ILK, integrin-linked ki 100.0 4.4E-33 1.5E-37 291.2 16.3 196 626-831 10-215 (271)
185 2owb_A Serine/threonine-protei 100.0 6.2E-33 2.1E-37 299.2 17.9 201 625-830 40-244 (335)
186 3com_A Serine/threonine-protei 100.0 6.4E-33 2.2E-37 296.7 17.8 201 624-830 27-228 (314)
187 1t46_A HOMO sapiens V-KIT hard 100.0 3.4E-33 1.2E-37 298.7 15.7 204 625-831 22-252 (313)
188 2buj_A Serine/threonine-protei 100.0 3.7E-33 1.3E-37 299.0 15.8 203 625-830 28-249 (317)
189 4e5w_A Tyrosine-protein kinase 100.0 2E-33 6.9E-38 298.8 13.6 201 626-829 21-231 (302)
190 2jam_A Calcium/calmodulin-depe 100.0 4.5E-33 1.5E-37 296.3 16.3 200 624-830 7-210 (304)
191 3dtc_A Mitogen-activated prote 100.0 3.4E-33 1.1E-37 292.1 15.0 197 625-830 6-217 (271)
192 1u59_A Tyrosine-protein kinase 100.0 4.6E-33 1.6E-37 293.6 16.1 202 626-831 9-218 (287)
193 2vgo_A Serine/threonine-protei 100.0 9E-33 3.1E-37 290.9 18.2 198 626-830 14-215 (284)
194 3bhy_A Death-associated protei 100.0 7.1E-33 2.4E-37 291.6 17.4 200 625-830 4-214 (283)
195 1cm8_A Phosphorylated MAP kina 100.0 4E-33 1.4E-37 303.9 15.8 196 625-830 24-229 (367)
196 3kex_A Receptor tyrosine-prote 100.0 2E-33 6.8E-38 301.8 13.0 202 626-831 13-222 (325)
197 2pvf_A Fibroblast growth facto 100.0 5.5E-33 1.9E-37 299.7 16.5 203 625-830 34-263 (334)
198 1xku_A Decorin; proteoglycan, 100.0 4.4E-32 1.5E-36 292.1 23.5 277 112-490 52-330 (330)
199 2ft3_A Biglycan; proteoglycan, 100.0 2.8E-32 9.7E-37 293.8 21.9 287 161-514 34-331 (332)
200 3a7i_A MST3 kinase, serine/thr 100.0 1.3E-32 4.6E-37 292.5 18.9 200 625-830 21-222 (303)
201 4hgt_A Casein kinase I isoform 100.0 8.7E-33 3E-37 293.0 17.5 202 624-831 7-219 (296)
202 3lxl_A Tyrosine-protein kinase 100.0 2.4E-33 8.1E-38 301.7 13.2 201 626-829 23-232 (327)
203 3mi9_A Cell division protein k 100.0 6.1E-33 2.1E-37 301.7 16.5 201 626-830 17-232 (351)
204 2pml_X PFPK7, Ser/Thr protein 100.0 6.2E-33 2.1E-37 301.4 16.1 201 625-832 30-257 (348)
205 3lm5_A Serine/threonine-protei 100.0 6.5E-33 2.2E-37 298.0 16.1 209 617-830 19-236 (327)
206 3mwu_A Calmodulin-domain prote 100.0 8.2E-33 2.8E-37 313.9 17.8 200 624-830 20-225 (486)
207 1t4h_A Serine/threonine-protei 100.0 2.6E-32 8.8E-37 288.4 20.3 199 626-832 26-234 (290)
208 2xir_A Vascular endothelial gr 100.0 3.7E-33 1.2E-37 298.9 14.0 213 617-832 18-256 (316)
209 2j7t_A Serine/threonine-protei 100.0 2.4E-33 8.2E-38 298.3 12.4 202 625-830 18-225 (302)
210 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.7E-33 1.3E-37 300.1 13.9 201 624-830 32-241 (329)
211 1mqb_A Ephrin type-A receptor 100.0 8.4E-33 2.9E-37 297.8 16.5 202 626-830 44-254 (333)
212 4aaa_A Cyclin-dependent kinase 100.0 8.1E-33 2.8E-37 298.0 16.3 200 626-830 25-228 (331)
213 2v62_A Serine/threonine-protei 100.0 1.8E-33 6E-38 304.8 11.1 201 625-830 36-263 (345)
214 3fme_A Dual specificity mitoge 100.0 6.6E-33 2.3E-37 293.0 15.1 207 625-837 6-223 (290)
215 3uzp_A CKI-delta, CKID, casein 100.0 1.6E-32 5.4E-37 291.0 18.0 200 625-830 8-218 (296)
216 3f66_A Hepatocyte growth facto 100.0 1.2E-32 4.1E-37 292.2 17.1 202 626-830 25-236 (298)
217 2wqm_A Serine/threonine-protei 100.0 1.3E-32 4.3E-37 293.8 17.1 202 625-830 31-239 (310)
218 3lij_A Calcium/calmodulin depe 100.0 9E-33 3.1E-37 314.0 16.8 200 625-831 36-241 (494)
219 1z7x_W Ribonuclease inhibitor; 100.0 1.2E-35 4.3E-40 336.0 -6.7 384 64-469 4-441 (461)
220 3lzb_A Epidermal growth factor 100.0 6.9E-33 2.4E-37 297.5 15.0 203 625-831 14-224 (327)
221 2xrw_A Mitogen-activated prote 100.0 1.3E-32 4.5E-37 300.9 17.4 197 625-830 24-229 (371)
222 3nyv_A Calmodulin-domain prote 100.0 6.7E-33 2.3E-37 314.8 15.7 199 625-830 25-230 (484)
223 3nsz_A CK II alpha, casein kin 100.0 1.7E-32 5.7E-37 295.7 18.0 194 626-831 36-235 (330)
224 1xku_A Decorin; proteoglycan, 100.0 1.4E-31 4.9E-36 288.1 25.2 197 42-246 32-229 (330)
225 3byv_A Rhoptry kinase; malaria 100.0 1.3E-33 4.3E-38 309.9 9.3 197 625-830 72-316 (377)
226 3eb0_A Putative uncharacterize 100.0 1.3E-32 4.5E-37 302.5 17.4 198 623-830 4-245 (383)
227 3eqc_A Dual specificity mitoge 100.0 5.4E-33 1.8E-37 303.3 14.2 199 625-830 32-233 (360)
228 3c1x_A Hepatocyte growth facto 100.0 5.2E-33 1.8E-37 303.1 14.0 202 627-831 90-301 (373)
229 2clq_A Mitogen-activated prote 100.0 1.5E-32 5E-37 291.1 17.0 201 627-831 23-229 (295)
230 2x7f_A TRAF2 and NCK-interacti 100.0 4E-33 1.4E-37 300.0 12.8 210 616-830 14-237 (326)
231 1p4o_A Insulin-like growth fac 100.0 2.7E-33 9.2E-38 300.8 11.2 208 620-830 19-244 (322)
232 3pls_A Macrophage-stimulating 100.0 2.2E-32 7.5E-37 290.2 17.8 200 627-829 22-230 (298)
233 3an0_A Dual specificity mitoge 100.0 9.8E-33 3.3E-37 298.7 15.3 201 625-831 50-261 (340)
234 2h6d_A 5'-AMP-activated protei 100.0 1.9E-32 6.3E-37 287.3 16.9 200 625-830 10-214 (276)
235 3q5i_A Protein kinase; CDPK, m 100.0 2.3E-32 8E-37 311.4 19.0 200 624-830 34-250 (504)
236 2fst_X Mitogen-activated prote 100.0 6.4E-33 2.2E-37 301.9 13.7 196 625-830 28-233 (367)
237 3mdy_A Bone morphogenetic prot 100.0 5.1E-32 1.7E-36 292.9 20.7 204 619-831 30-266 (337)
238 2jii_A Serine/threonine-protei 100.0 3.4E-33 1.2E-37 303.6 11.4 199 625-832 41-273 (352)
239 2h8h_A Proto-oncogene tyrosine 100.0 3.7E-33 1.3E-37 319.2 12.0 201 625-830 266-468 (535)
240 2w1i_A JAK2; chromosomal rearr 100.0 8.3E-33 2.8E-37 297.2 14.0 202 625-829 40-250 (326)
241 2ycf_A Serine/threonine-protei 100.0 1.7E-32 5.7E-37 294.4 16.2 202 624-832 8-224 (322)
242 3lxp_A Non-receptor tyrosine-p 100.0 1.8E-32 6.2E-37 293.4 16.2 200 626-830 30-240 (318)
243 3q60_A ROP5B; pseudokinase, tr 100.0 4.6E-33 1.6E-37 304.8 11.7 198 626-831 62-297 (371)
244 1x8b_A WEE1HU, WEE1-like prote 100.0 2.5E-32 8.7E-37 288.3 17.0 197 625-829 10-233 (289)
245 2r3i_A Cell division protein k 100.0 2.2E-32 7.6E-37 290.3 16.4 200 626-830 3-207 (299)
246 1fvr_A Tyrosine-protein kinase 100.0 1.5E-32 5.1E-37 295.5 14.7 200 626-830 25-245 (327)
247 2w5a_A Serine/threonine-protei 100.0 1.3E-32 4.4E-37 288.9 13.8 202 625-830 5-219 (279)
248 3brb_A Proto-oncogene tyrosine 100.0 2.6E-32 9E-37 291.7 16.4 205 624-831 32-254 (313)
249 2ozo_A Tyrosine-protein kinase 100.0 1.2E-32 4.1E-37 319.5 14.8 201 627-831 336-544 (613)
250 2a19_B Interferon-induced, dou 100.0 1.3E-32 4.6E-37 289.7 13.8 197 624-829 9-223 (284)
251 2vwi_A Serine/threonine-protei 100.0 5.7E-33 1.9E-37 295.5 11.0 205 624-831 13-231 (303)
252 3qyz_A Mitogen-activated prote 100.0 3.8E-32 1.3E-36 296.7 17.7 200 625-830 26-235 (364)
253 3kvw_A DYRK2, dual specificity 100.0 3.2E-32 1.1E-36 303.0 17.4 197 625-830 96-302 (429)
254 4e7w_A Glycogen synthase kinas 100.0 1.9E-32 6.4E-37 301.8 15.3 196 626-830 40-245 (394)
255 1phk_A Phosphorylase kinase; g 100.0 5.7E-32 2E-36 287.0 18.6 202 623-830 14-232 (298)
256 3ll6_A Cyclin G-associated kin 100.0 3.9E-32 1.3E-36 293.8 17.4 202 625-830 27-256 (337)
257 1b6c_B TGF-B superfamily recep 100.0 5E-32 1.7E-36 293.6 18.0 211 617-833 33-273 (342)
258 1wak_A Serine/threonine-protei 100.0 2.7E-32 9.2E-37 302.3 16.0 199 625-831 36-297 (397)
259 3sv0_A Casein kinase I-like; t 100.0 5.2E-32 1.8E-36 303.5 17.9 202 625-832 6-218 (483)
260 1j1b_A Glycogen synthase kinas 100.0 3.2E-32 1.1E-36 302.4 15.9 195 626-830 54-260 (420)
261 3g2f_A Bone morphogenetic prot 100.0 2.2E-32 7.6E-37 295.5 14.2 196 625-829 12-237 (336)
262 2i1m_A Macrophage colony-stimu 100.0 1.7E-32 5.8E-37 296.0 13.2 205 624-831 44-271 (333)
263 2wtk_C Serine/threonine-protei 100.0 7.5E-32 2.6E-36 287.1 18.0 203 624-830 3-216 (305)
264 1zy4_A Serine/threonine-protei 100.0 4E-32 1.4E-36 288.9 15.8 195 624-822 4-226 (303)
265 1byg_A CSK, protein (C-termina 100.0 1.3E-32 4.5E-37 288.7 11.8 196 625-830 20-218 (278)
266 1blx_A Cyclin-dependent kinase 100.0 5.6E-32 1.9E-36 291.0 16.6 201 624-830 9-222 (326)
267 2i6l_A Mitogen-activated prote 100.0 5.6E-32 1.9E-36 290.3 16.4 201 625-831 10-229 (320)
268 2yfx_A Tyrosine-protein kinase 100.0 3E-32 1E-36 293.1 14.2 203 625-830 29-249 (327)
269 3rgf_A Cyclin-dependent kinase 100.0 3.1E-32 1.1E-36 301.8 14.5 199 626-830 20-239 (405)
270 3gxj_A TGF-beta receptor type- 100.0 1.1E-33 3.9E-38 300.9 2.6 197 625-830 2-231 (303)
271 1xbb_A Tyrosine-protein kinase 100.0 2E-32 6.9E-37 289.3 11.8 201 625-830 15-224 (291)
272 3e3p_A Protein kinase, putativ 100.0 1.1E-31 3.9E-36 293.0 17.8 207 619-830 16-235 (360)
273 4exu_A Mitogen-activated prote 100.0 8.1E-32 2.8E-36 294.6 16.6 195 625-830 41-245 (371)
274 3aln_A Dual specificity mitoge 100.0 1.3E-31 4.4E-36 288.2 17.6 201 625-831 21-233 (327)
275 1z57_A Dual specificity protei 100.0 1.3E-31 4.6E-36 289.8 17.7 197 625-830 13-237 (339)
276 1u46_A ACK-1, activated CDC42 100.0 3E-32 1E-36 288.1 11.8 202 625-830 17-228 (291)
277 2b9h_A MAP kinase FUS3, mitoge 100.0 1.4E-31 4.8E-36 291.3 17.1 200 625-830 10-226 (353)
278 2vx3_A Dual specificity tyrosi 100.0 2.5E-31 8.6E-36 292.1 19.3 200 624-830 52-261 (382)
279 3cek_A Dual specificity protei 100.0 1.1E-31 3.9E-36 286.8 15.7 203 624-832 26-244 (313)
280 2j0j_A Focal adhesion kinase 1 100.0 8E-32 2.7E-36 314.4 15.5 202 625-830 389-596 (656)
281 2wei_A Calmodulin-domain prote 100.0 1.8E-31 6.3E-36 281.3 16.2 201 623-830 19-225 (287)
282 3coi_A Mitogen-activated prote 100.0 1.9E-31 6.5E-36 290.1 16.1 195 625-830 23-227 (353)
283 4fl3_A Tyrosine-protein kinase 100.0 8.7E-32 3E-36 312.9 14.2 195 632-831 375-577 (635)
284 2eu9_A Dual specificity protei 100.0 3E-31 1E-35 289.1 17.4 197 625-830 18-242 (355)
285 3qa8_A MGC80376 protein; kinas 100.0 1.4E-31 4.8E-36 305.7 13.5 200 625-829 13-225 (676)
286 2dyl_A Dual specificity mitoge 100.0 2.5E-31 8.5E-36 285.0 14.3 200 626-831 25-233 (318)
287 3fhr_A MAP kinase-activated pr 100.0 3.1E-31 1.1E-35 285.7 14.7 198 624-831 26-233 (336)
288 2iwi_A Serine/threonine-protei 100.0 9.4E-32 3.2E-36 287.3 10.4 205 618-829 23-241 (312)
289 2y4i_B KSR2, HKSR2, kinase sup 100.0 7.2E-32 2.5E-36 289.3 9.4 201 624-830 31-246 (319)
290 3a99_A Proto-oncogene serine/t 100.0 1E-31 3.4E-36 287.7 10.5 202 621-829 38-251 (320)
291 2rio_A Serine/threonine-protei 100.0 3.9E-31 1.3E-35 295.0 14.9 199 626-831 15-244 (434)
292 2vuw_A Serine/threonine-protei 100.0 4.3E-32 1.5E-36 293.0 7.0 192 625-829 19-279 (336)
293 1q8y_A SR protein kinase; tran 100.0 3.6E-31 1.2E-35 290.5 14.1 197 625-830 18-238 (373)
294 3p23_A Serine/threonine-protei 100.0 3.9E-31 1.3E-35 293.9 13.9 198 626-830 24-233 (432)
295 2pzi_A Probable serine/threoni 100.0 8.9E-31 3E-35 309.1 13.6 193 625-830 79-279 (681)
296 2z66_A Variable lymphocyte rec 100.0 2E-30 6.9E-35 276.0 14.7 272 266-543 11-291 (306)
297 3zyj_A Leucine-rich repeat-con 100.0 4.4E-30 1.5E-34 287.9 17.4 252 264-522 45-298 (440)
298 1ozn_A Reticulon 4 receptor; N 100.0 4.3E-30 1.5E-34 270.4 14.1 232 312-543 32-265 (285)
299 2z80_A TOLL-like receptor 2, v 100.0 3.1E-30 1.1E-34 280.4 12.7 261 210-523 53-321 (353)
300 3uqc_A Probable conserved tran 100.0 8.9E-30 3E-34 267.3 15.4 174 625-832 30-207 (286)
301 3ogk_B Coronatine-insensitive 100.0 6.7E-32 2.3E-36 315.6 -0.9 408 79-493 64-527 (592)
302 3zyi_A Leucine-rich repeat-con 100.0 2.2E-29 7.7E-34 283.1 19.7 252 264-522 56-309 (452)
303 2z80_A TOLL-like receptor 2, v 100.0 1.1E-29 3.7E-34 276.1 15.2 280 41-351 31-316 (353)
304 4fcg_A Uncharacterized protein 100.0 4.3E-29 1.5E-33 267.5 19.6 224 289-516 82-314 (328)
305 2z66_A Variable lymphocyte rec 100.0 1.3E-29 4.3E-34 269.8 15.1 212 310-522 76-293 (306)
306 3m2w_A MAP kinase-activated pr 100.0 5.3E-29 1.8E-33 264.0 17.1 175 625-830 16-201 (299)
307 3dzo_A Rhoptry kinase domain; 100.0 1.1E-29 3.6E-34 281.4 11.3 197 626-831 78-321 (413)
308 3ogk_B Coronatine-insensitive 100.0 6.3E-31 2.2E-35 307.4 0.6 407 103-518 64-528 (592)
309 4fcg_A Uncharacterized protein 100.0 4E-28 1.4E-32 260.0 19.6 225 262-492 81-314 (328)
310 1ozn_A Reticulon 4 receptor; N 100.0 2.8E-28 9.5E-33 256.5 17.8 252 265-522 14-267 (285)
311 3zyj_A Leucine-rich repeat-con 100.0 4.6E-28 1.6E-32 271.4 19.1 250 289-543 44-296 (440)
312 3oja_A Leucine-rich immune mol 100.0 2.4E-29 8.3E-34 284.2 8.7 217 289-519 35-253 (487)
313 1wwl_A Monocyte differentiatio 100.0 1.4E-29 4.8E-34 269.8 6.2 202 310-517 93-310 (312)
314 3zyi_A Leucine-rich repeat-con 100.0 1.3E-27 4.5E-32 268.7 21.6 245 19-275 56-303 (452)
315 3o53_A Protein LRIM1, AGAP0063 100.0 1.3E-28 4.4E-33 263.0 11.4 267 161-448 11-280 (317)
316 2p1m_B Transport inhibitor res 99.9 1.3E-30 4.4E-35 304.9 -7.4 406 84-515 101-543 (594)
317 1wwl_A Monocyte differentiatio 99.9 7E-29 2.4E-33 264.4 6.2 249 229-493 39-310 (312)
318 3g06_A SSPH2 (leucine-rich rep 99.9 9.9E-27 3.4E-31 267.7 23.3 268 64-431 41-308 (622)
319 3g06_A SSPH2 (leucine-rich rep 99.9 8.9E-27 3E-31 268.2 22.7 266 187-502 42-307 (622)
320 3o53_A Protein LRIM1, AGAP0063 99.9 5.2E-29 1.8E-33 266.0 3.4 267 187-522 12-282 (317)
321 2z62_A TOLL-like receptor 4, v 99.9 2.4E-27 8.3E-32 248.0 14.1 212 313-525 29-246 (276)
322 4azs_A Methyltransferase WBDD; 99.9 6.2E-28 2.1E-32 276.2 5.0 184 634-826 242-437 (569)
323 2p1m_B Transport inhibitor res 99.9 4.7E-29 1.6E-33 291.7 -4.9 399 62-491 104-543 (594)
324 1p9a_G Platelet glycoprotein I 99.9 3.8E-26 1.3E-30 239.8 17.2 207 308-520 6-212 (290)
325 3oja_A Leucine-rich immune mol 99.9 2.7E-27 9.1E-32 267.5 8.8 148 360-511 120-270 (487)
326 2o6q_A Variable lymphocyte rec 99.9 1.8E-25 6.2E-30 232.7 19.1 207 313-522 17-224 (270)
327 2z62_A TOLL-like receptor 4, v 99.9 3.2E-25 1.1E-29 231.9 18.4 207 288-495 28-240 (276)
328 1p9a_G Platelet glycoprotein I 99.9 1.1E-24 3.8E-29 228.6 15.9 208 331-543 5-212 (290)
329 2o6q_A Variable lymphocyte rec 99.9 4.5E-24 1.5E-28 222.2 19.6 203 18-249 17-221 (270)
330 3rfs_A Internalin B, repeat mo 99.9 4E-24 1.4E-28 222.7 15.6 205 307-522 36-241 (272)
331 3rfs_A Internalin B, repeat mo 99.9 1.9E-24 6.5E-29 225.1 13.2 209 13-232 37-245 (272)
332 3en9_A Glycoprotease, O-sialog 99.9 3.7E-25 1.2E-29 251.9 6.3 185 629-828 339-539 (540)
333 4glp_A Monocyte differentiatio 99.9 4.8E-24 1.6E-28 226.8 12.9 201 290-516 93-307 (310)
334 4glp_A Monocyte differentiatio 99.9 2.6E-24 8.8E-29 228.9 10.2 204 311-539 90-307 (310)
335 3goz_A Leucine-rich repeat-con 99.9 4.2E-25 1.4E-29 240.4 3.7 99 337-437 197-312 (362)
336 2xwt_C Thyrotropin receptor; s 99.9 7.7E-24 2.6E-28 216.2 12.7 196 313-513 32-236 (239)
337 2ca6_A RAN GTPase-activating p 99.9 1.8E-25 6.1E-30 246.0 -0.3 187 308-494 90-318 (386)
338 2xwt_C Thyrotropin receptor; s 99.9 1.5E-23 5E-28 214.1 12.3 194 42-272 32-236 (239)
339 3goz_A Leucine-rich repeat-con 99.9 1E-24 3.5E-29 237.4 3.6 231 290-520 24-301 (362)
340 1h6u_A Internalin H; cell adhe 99.9 4E-23 1.4E-27 219.0 15.7 196 308-518 37-232 (308)
341 3m19_A Variable lymphocyte rec 99.9 7.8E-23 2.7E-27 210.3 15.6 182 313-520 15-196 (251)
342 1h6u_A Internalin H; cell adhe 99.9 7.8E-23 2.7E-27 216.8 14.8 195 39-249 39-233 (308)
343 2ca6_A RAN GTPase-activating p 99.9 5.4E-25 1.8E-29 242.1 -2.5 244 255-520 25-320 (386)
344 4ay9_X Follicle-stimulating ho 99.9 8.3E-23 2.8E-27 221.1 13.8 248 10-272 3-256 (350)
345 3m19_A Variable lymphocyte rec 99.9 2.3E-22 7.8E-27 206.8 15.8 183 64-251 15-197 (251)
346 2ast_B S-phase kinase-associat 99.9 7.7E-24 2.6E-28 228.4 4.4 222 43-272 49-282 (336)
347 2ast_B S-phase kinase-associat 99.9 1.3E-23 4.5E-28 226.6 4.5 228 289-521 71-311 (336)
348 2v70_A SLIT-2, SLIT homolog 2 99.9 2.1E-22 7.3E-27 202.0 8.9 178 363-543 14-193 (220)
349 4ay9_X Follicle-stimulating ho 99.9 4.4E-22 1.5E-26 215.3 11.4 125 320-444 88-215 (350)
350 1zar_A RIO2 kinase; serine kin 99.9 3.4E-22 1.2E-26 208.2 9.1 153 618-800 82-252 (282)
351 2v9t_B SLIT homolog 2 protein 99.9 4.4E-22 1.5E-26 199.8 8.6 178 363-543 14-192 (220)
352 2o6s_A Variable lymphocyte rec 99.8 1E-20 3.5E-25 188.5 16.1 179 19-209 9-189 (208)
353 3cvr_A Invasion plasmid antige 99.8 3.7E-21 1.2E-25 218.6 14.0 169 312-504 80-255 (571)
354 3cvr_A Invasion plasmid antige 99.8 5E-21 1.7E-25 217.5 14.0 182 313-521 60-248 (571)
355 2xot_A Amphoterin-induced prot 99.8 8.6E-21 2.9E-25 206.1 11.0 161 362-522 41-208 (361)
356 2o6s_A Variable lymphocyte rec 99.8 6.6E-20 2.3E-24 182.6 16.4 161 289-456 29-190 (208)
357 1h6t_A Internalin B; cell adhe 99.8 2.8E-20 9.6E-25 195.3 12.0 173 308-517 42-214 (291)
358 1h6t_A Internalin B; cell adhe 99.8 6.5E-20 2.2E-24 192.5 13.8 169 288-493 46-214 (291)
359 1w8a_A SLIT protein; signaling 99.8 1E-20 3.4E-25 185.5 6.8 155 387-543 11-166 (192)
360 3e6j_A Variable lymphocyte rec 99.8 8.4E-20 2.9E-24 184.4 12.9 157 362-522 21-178 (229)
361 1m9s_A Internalin B; cell inva 99.8 1.8E-19 6.1E-24 207.2 15.1 186 308-506 39-224 (605)
362 2v70_A SLIT-2, SLIT homolog 2 99.8 3.9E-19 1.3E-23 178.2 14.4 155 19-177 13-170 (220)
363 1m9s_A Internalin B; cell inva 99.8 1.7E-19 5.7E-24 207.5 12.1 144 19-173 23-166 (605)
364 2v9t_B SLIT homolog 2 protein 99.8 2.4E-19 8.3E-24 179.7 11.0 156 386-543 13-169 (220)
365 2xot_A Amphoterin-induced prot 99.8 1.8E-19 6.1E-24 195.6 10.7 126 20-149 21-149 (361)
366 2wfh_A SLIT homolog 2 protein 99.8 1.5E-19 5.2E-24 176.9 7.3 154 387-543 13-166 (193)
367 4ezg_A Putative uncharacterize 99.8 4.2E-19 1.4E-23 174.9 10.3 154 357-517 41-195 (197)
368 3sb4_A Hypothetical leucine ri 99.8 1.3E-19 4.4E-24 194.2 6.5 233 6-248 12-264 (329)
369 1dce_A Protein (RAB geranylger 99.8 8.8E-22 3E-26 225.1 -11.3 154 348-522 397-552 (567)
370 1xeu_A Internalin C; cellular 99.8 1.2E-19 4.3E-24 187.2 5.6 171 310-518 17-187 (263)
371 3e6j_A Variable lymphocyte rec 99.8 3.6E-18 1.2E-22 172.4 16.0 155 65-249 21-175 (229)
372 4ezg_A Putative uncharacterize 99.8 5.8E-19 2E-23 173.9 9.4 153 38-198 41-194 (197)
373 1xeu_A Internalin C; cellular 99.8 5.7E-19 2E-23 182.2 8.1 152 307-470 36-187 (263)
374 1dce_A Protein (RAB geranylger 99.8 2.8E-20 9.5E-25 212.7 -2.7 100 433-537 443-544 (567)
375 4b8c_D Glucose-repressible alc 99.8 5.3E-19 1.8E-23 208.7 8.0 196 233-465 173-369 (727)
376 1zth_A RIO1 serine protein kin 99.7 8.4E-19 2.9E-23 180.4 7.9 137 627-776 48-219 (258)
377 1w8a_A SLIT protein; signaling 99.7 3.7E-18 1.3E-22 167.2 12.1 175 363-543 11-187 (192)
378 4b8c_D Glucose-repressible alc 99.7 5.2E-19 1.8E-23 208.7 3.9 150 320-473 209-359 (727)
379 3sb4_A Hypothetical leucine ri 99.7 1.2E-17 4.2E-22 178.8 10.5 224 184-437 100-327 (329)
380 2o6r_A Variable lymphocyte rec 99.7 2.9E-17 9.8E-22 158.7 9.9 137 386-524 9-145 (177)
381 2ell_A Acidic leucine-rich nuc 99.7 9.4E-17 3.2E-21 153.6 9.0 132 360-492 24-160 (168)
382 2ell_A Acidic leucine-rich nuc 99.7 8.4E-17 2.9E-21 154.0 8.1 134 383-518 23-162 (168)
383 2wfh_A SLIT homolog 2 protein 99.7 3.3E-16 1.1E-20 153.1 11.4 129 363-494 13-141 (193)
384 4fdw_A Leucine rich hypothetic 99.6 2.8E-15 9.5E-20 163.8 18.6 264 17-301 113-383 (401)
385 2je0_A Acidic leucine-rich nuc 99.6 9.6E-17 3.3E-21 150.2 5.2 126 384-511 17-148 (149)
386 4gyi_A RIO2 kinase; protein ki 99.6 1.2E-16 4E-21 169.8 6.3 137 626-776 95-265 (397)
387 2je0_A Acidic leucine-rich nuc 99.6 3.4E-16 1.1E-20 146.5 8.4 128 16-144 16-148 (149)
388 4fdw_A Leucine rich hypothetic 99.6 5.3E-15 1.8E-19 161.5 19.1 273 86-398 111-384 (401)
389 4fs7_A Uncharacterized protein 99.6 3.3E-15 1.1E-19 164.1 16.8 80 424-507 313-392 (394)
390 4fs7_A Uncharacterized protein 99.6 1.2E-14 4.2E-19 159.6 20.2 155 32-195 62-218 (394)
391 2o6r_A Variable lymphocyte rec 99.6 2.9E-15 1E-19 144.5 12.9 131 44-176 10-140 (177)
392 1a9n_A U2A', U2A'; complex (nu 99.6 9E-16 3.1E-20 147.9 8.1 110 13-125 15-126 (176)
393 1ds9_A Outer arm dynein; leuci 99.6 8.8E-18 3E-22 165.5 -6.4 153 359-517 17-186 (198)
394 1a9n_A U2A', U2A'; complex (nu 99.6 5.5E-16 1.9E-20 149.5 6.1 134 379-517 14-154 (176)
395 3g39_A Variable lymphocyte rec 99.6 3.5E-15 1.2E-19 142.6 8.8 110 410-522 12-121 (170)
396 1ds9_A Outer arm dynein; leuci 99.6 2.9E-17 1E-21 161.8 -5.9 133 355-493 43-186 (198)
397 2r9u_A Variable lymphocyte rec 99.5 1E-14 3.6E-19 139.7 9.0 109 410-521 15-123 (174)
398 3g39_A Variable lymphocyte rec 99.5 4E-14 1.4E-18 135.2 10.4 109 385-495 10-118 (170)
399 2r9u_A Variable lymphocyte rec 99.5 4.3E-14 1.5E-18 135.4 8.4 107 386-494 14-120 (174)
400 4gt6_A Cell surface protein; l 99.4 3.5E-12 1.2E-16 140.0 17.6 32 210-242 183-214 (394)
401 2ifg_A High affinity nerve gro 99.4 1.6E-13 5.4E-18 148.1 6.4 103 388-492 12-116 (347)
402 3un9_A NLR family member X1; l 99.4 1.8E-14 6.3E-19 155.7 -1.2 159 41-199 72-253 (372)
403 2ifg_A High affinity nerve gro 99.4 4E-13 1.4E-17 145.0 9.0 131 410-543 11-145 (347)
404 4gt6_A Cell surface protein; l 99.4 7.9E-12 2.7E-16 137.1 18.9 133 377-515 258-390 (394)
405 3un9_A NLR family member X1; l 99.3 1.3E-14 4.5E-19 156.8 -6.7 186 312-517 72-284 (372)
406 3tm0_A Aminoglycoside 3'-phosp 99.3 1.4E-11 4.7E-16 127.1 10.5 146 623-775 11-213 (263)
407 1nd4_A Aminoglycoside 3'-phosp 99.1 1.3E-10 4.3E-15 119.8 8.8 138 626-775 20-214 (264)
408 4h09_A Hypothetical leucine ri 99.1 3.3E-09 1.1E-13 115.5 18.6 59 107-168 41-99 (379)
409 4h09_A Hypothetical leucine ri 99.0 9.2E-09 3.2E-13 112.0 20.1 83 83-170 41-123 (379)
410 2ra8_A Uncharacterized protein 99.0 1.2E-10 4E-15 124.6 2.6 83 430-514 251-341 (362)
411 3dxp_A Putative acyl-COA dehyd 98.9 1.9E-09 6.5E-14 116.5 9.8 143 630-776 42-249 (359)
412 3sg8_A APH(2'')-ID; antibiotic 98.9 8.6E-10 2.9E-14 116.2 6.8 187 631-828 25-288 (304)
413 2ra8_A Uncharacterized protein 98.9 1E-09 3.6E-14 117.3 6.8 115 82-199 166-293 (362)
414 3r70_A Aminoglycoside phosphot 98.6 3.2E-07 1.1E-11 97.1 12.6 137 627-776 38-238 (320)
415 3rw6_A Nuclear RNA export fact 98.5 1.4E-08 4.7E-13 102.8 0.6 106 84-191 137-257 (267)
416 1io0_A Tropomodulin; LRR prote 98.5 1.7E-08 5.7E-13 97.3 0.8 68 107-174 60-137 (185)
417 1io0_A Tropomodulin; LRR prote 98.5 1.1E-08 3.9E-13 98.5 -0.6 42 451-492 117-164 (185)
418 3tdw_A Gentamicin resistance p 98.4 1.9E-06 6.6E-11 90.3 14.3 137 631-776 24-225 (306)
419 3rw6_A Nuclear RNA export fact 98.4 1.1E-07 3.7E-12 96.1 3.4 91 427-520 137-237 (267)
420 3d1u_A Putative fructosamine-3 98.4 1.3E-06 4.4E-11 90.4 11.3 76 630-709 19-97 (288)
421 4gkh_A Aminoglycoside 3'-phosp 98.4 2.2E-06 7.6E-11 88.2 13.2 137 632-776 30-224 (272)
422 3ovc_A Hygromycin-B 4-O-kinase 98.3 2.5E-06 8.5E-11 91.5 12.7 77 628-710 43-122 (362)
423 3ats_A Putative uncharacterize 98.2 1.6E-06 5.3E-11 93.4 8.0 80 631-710 25-121 (357)
424 3e4g_A ATP synthase subunit S, 98.1 6.5E-07 2.2E-11 83.7 1.8 101 88-188 61-170 (176)
425 2olc_A MTR kinase, methylthior 98.0 1.2E-05 4.3E-10 87.6 10.2 75 631-707 35-120 (397)
426 2q83_A YTAA protein; 2635576, 97.9 5.6E-05 1.9E-09 80.6 12.7 139 632-775 38-252 (346)
427 3rfe_A Platelet glycoprotein I 97.9 7.1E-06 2.4E-10 73.3 4.1 84 458-543 11-97 (130)
428 2pyw_A Uncharacterized protein 97.9 2.4E-05 8.1E-10 86.0 8.5 81 743-824 230-313 (420)
429 3e4g_A ATP synthase subunit S, 97.7 1.1E-05 3.7E-10 75.4 2.9 37 138-174 63-100 (176)
430 3jr1_A Putative fructosamine-3 97.7 0.00022 7.6E-09 74.1 13.1 136 631-771 41-232 (312)
431 2ppq_A HSK, HK, homoserine kin 97.6 0.00014 4.9E-09 76.6 9.7 157 616-775 7-217 (322)
432 3f7w_A Putative fructosamine-3 97.6 0.0002 6.8E-09 74.1 10.3 79 627-709 16-97 (288)
433 1pgv_A TMD-1, tropomodulin TMD 97.4 6.8E-05 2.3E-09 71.4 3.5 123 131-274 36-169 (197)
434 1zyl_A Hypothetical protein YI 97.4 0.001 3.4E-08 70.2 12.3 157 616-776 11-224 (328)
435 3feg_A Choline/ethanolamine ki 97.4 0.00046 1.6E-08 73.8 9.4 139 632-775 56-254 (379)
436 1nw1_A Choline kinase (49.2 KD 97.3 0.00046 1.6E-08 75.6 8.9 73 631-709 78-159 (429)
437 1pgv_A TMD-1, tropomodulin TMD 97.3 7.5E-05 2.6E-09 71.1 1.8 74 108-181 37-119 (197)
438 3dxq_A Choline/ethanolamine ki 97.3 0.00026 9.1E-09 73.7 6.2 137 631-776 23-203 (301)
439 3csv_A Aminoglycoside phosphot 97.2 0.0012 4E-08 69.8 10.9 140 632-776 24-218 (333)
440 2qg7_A Ethanolamine kinase PV0 97.2 0.0013 4.4E-08 72.3 10.5 74 631-709 113-188 (458)
441 3c5i_A Choline kinase; choline 97.0 0.0012 4.2E-08 70.9 8.2 73 632-709 39-121 (369)
442 3rfe_A Platelet glycoprotein I 96.9 0.00098 3.4E-08 59.2 5.6 55 45-100 12-67 (130)
443 3i1a_A Spectinomycin phosphotr 96.8 0.007 2.4E-07 63.9 12.0 33 744-776 205-237 (339)
444 3f2s_A CK, chetk-alpha, cholin 96.5 0.0057 1.9E-07 65.6 8.9 140 632-775 58-280 (401)
445 3mes_A Choline kinase; malaria 96.1 0.0058 2E-07 66.2 6.3 74 631-709 75-157 (424)
446 3g15_A CK, chetk-alpha, cholin 94.5 0.098 3.3E-06 56.5 9.3 30 746-775 245-280 (401)
447 2yle_A Protein spire homolog 1 93.6 0.16 5.4E-06 48.5 7.5 102 708-826 34-135 (229)
448 4ann_A ESSB; membrane protein, 82.5 2.3 7.8E-05 40.5 6.6 123 680-835 43-165 (215)
449 4ano_A ESSB; membrane protein, 68.1 13 0.00044 35.5 7.5 83 680-773 48-131 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 67.6 0.65 2.2E-05 50.9 -1.9 60 629-691 145-213 (463)
451 2x6h_A GH13170P, VPS34, phosph 60.4 1.3E+02 0.0045 34.1 15.0 25 750-774 551-575 (696)
452 2lz0_A Uncharacterized protein 58.5 16 0.00055 29.9 5.5 42 78-120 10-51 (100)
453 3ls8_A Phosphatidylinositol 3- 58.3 1.5E+02 0.0053 32.9 14.9 82 685-774 402-501 (614)
454 2lz0_A Uncharacterized protein 55.2 19 0.00067 29.4 5.5 47 99-146 7-53 (100)
455 2ks1_B Epidermal growth factor 49.4 12 0.00042 25.2 2.6 13 564-576 11-23 (44)
456 2l8s_A Integrin alpha-1; trans 41.5 14 0.00048 26.1 2.0 20 576-595 21-40 (54)
457 2knc_A Integrin alpha-IIB; tra 40.4 13 0.00043 26.4 1.7 21 576-596 24-44 (54)
458 2l2t_A Receptor tyrosine-prote 33.3 19 0.00065 24.3 1.6 7 566-572 12-18 (44)
459 3hhm_A Phosphatidylinositol-4, 32.5 1.4E+02 0.0049 35.7 9.8 26 750-775 937-962 (1091)
460 1zza_A Stannin, AG8_1; helix, 30.5 34 0.0012 25.3 2.7 25 568-592 17-41 (90)
461 2k1a_A Integrin alpha-IIB; sin 24.4 40 0.0014 22.5 1.9 17 577-593 23-39 (42)
462 2k1k_A Ephrin type-A receptor 22.4 55 0.0019 21.3 2.2 12 568-579 14-25 (38)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1e-69 Score=651.67 Aligned_cols=543 Identities=33% Similarity=0.536 Sum_probs=446.7
Q ss_pred CCCcccccCC--CCCCCCCCCEEeCcCCCCccCCCccc-cCCCCCCEEEcCCCccccccc-----CCCCCCCcEEeCCCC
Q 046438 2 QSFLTGTVPS--QLGSLSSLQYLDLSFNQLLGTIPSSI-FSINTLEILDLSNNQLSGSFP-----FFNMSSLQVIDLSDN 73 (851)
Q Consensus 2 ~~~~~~~~p~--~l~~l~~L~~L~ls~n~l~~~~~~~~-~~l~~L~~L~Ls~n~l~~~~~-----~~~~~~L~~L~Ls~n 73 (851)
++.++|.+|. .++++++|++|+|++|.+++.+|..+ ..+++|++|+|++|++++..+ +..+++|++|++++|
T Consensus 109 ~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n 188 (768)
T 3rgz_A 109 RNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGN 188 (768)
T ss_dssp SSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSS
T ss_pred CCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCC
Confidence 3567888888 89999999999999999988877766 788888888888888887554 567888888888888
Q ss_pred CCCCCCCcchhcCCcccccccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCC
Q 046438 74 RLSGELPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVP 153 (851)
Q Consensus 74 ~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 153 (851)
.+++..+ +..+++|++|+|++|.+++.+|. ++++++|++|+|++|.+++.+|..|+.+++|++|++++|++.+..|
T Consensus 189 ~l~~~~~---~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~ 264 (768)
T 3rgz_A 189 KISGDVD---VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 264 (768)
T ss_dssp EEESCCB---CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCC
T ss_pred cccccCC---cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccC
Confidence 8875544 36678888888888888776666 7888888888888888887778888888888888888888776666
Q ss_pred ccccCCCcCcEEEeeccccccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCcc-ccCC
Q 046438 154 ATLFNISTLKILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNR-FHNM 232 (851)
Q Consensus 154 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~-~~~l 232 (851)
.. .+++|++|++++|++++.+|..++..+++|++|+|++|++++..|..+.++++|+.|+|++|.+++..|.. |.++
T Consensus 265 ~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l 342 (768)
T 3rgz_A 265 PL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 342 (768)
T ss_dssp CC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTC
T ss_pred cc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcC
Confidence 54 67777777777777777777766655577777777777777777777777777777777777777555543 7777
Q ss_pred CCcceEeccCcccc-CCCCcchh-------------------hhhccc--cccccEEeccCCCccCCCCCCccccccccc
Q 046438 233 RNLKELNLEYNYIT-SSNHELSF-------------------ISSLAN--SKKLKVLSLTGNPLLDCVLPSSIGNLSLSM 290 (851)
Q Consensus 233 ~~L~~L~L~~N~i~-~~~~~~~~-------------------~~~l~~--l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L 290 (851)
++|++|++++|+++ .++..... ...+.. +++|++|++++|++. ..+|..+..+. +|
T Consensus 343 ~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~p~~l~~l~-~L 420 (768)
T 3rgz_A 343 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT-GKIPPTLSNCS-EL 420 (768)
T ss_dssp TTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEE-EECCGGGGGCT-TC
T ss_pred CCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccc-cccCHHHhcCC-CC
Confidence 77777777777776 22222110 011111 456777777777664 24566666665 78
Q ss_pred cEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCc
Q 046438 291 ERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHN 370 (851)
Q Consensus 291 ~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 370 (851)
+.|++++|++++.+|..++.+++|++|++++|.+.+.+|..+..+++|++|++++|++++..|..+..+++|+.|+|++|
T Consensus 421 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 500 (768)
T 3rgz_A 421 VSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNN 500 (768)
T ss_dssp CEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred CEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCC
Confidence 89999999998888999999999999999999999888999999999999999999999888999999999999999999
Q ss_pred ccCCCCCccccCCccccceecccCcCc-cCchhhcccCcceEEEecCCCCCCCCcccc----------------------
Q 046438 371 KLSGSIPACFGNLASLRKLSFASNELT-FVPSTFWNLTNILMVDLSSNPLSGSLPLEI---------------------- 427 (851)
Q Consensus 371 ~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---------------------- 427 (851)
++.+.+|..++.+++|++|++++|+++ .+|..+..+++|+.|++++|+++|.+|..+
T Consensus 501 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (768)
T 3rgz_A 501 RLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKN 580 (768)
T ss_dssp CCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEEC
T ss_pred ccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccc
Confidence 999999999999999999999999998 788899999999999999999887777543
Q ss_pred ------------------------------------------------ccchhhhhhhccCCcccccCCcccCCCCCccE
Q 046438 428 ------------------------------------------------GNLKVLVELYLSRNNLSGDIPTTIGGLKNLQN 459 (851)
Q Consensus 428 ------------------------------------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 459 (851)
+.+++|+.|+|++|+++|.+|..|+.+++|+.
T Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~ 660 (768)
T 3rgz_A 581 DGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFI 660 (768)
T ss_dssp CSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCE
T ss_pred ccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCE
Confidence 33567889999999999999999999999999
Q ss_pred EEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCCcccccCcccccCCcCc
Q 046438 460 LSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGTLANFTSESFMGNDLL 539 (851)
Q Consensus 460 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~ 539 (851)
|+|++|+++|.+|..++++++|+.|||++|+++|.+|..+..+++|++|++++|+++|.+|..+++.++...+|.||+.+
T Consensus 661 L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~L 740 (768)
T 3rgz_A 661 LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGL 740 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEE
T ss_pred EeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCC
Q 046438 540 CGSPHLQVPPCKSTKT 555 (851)
Q Consensus 540 c~~~~~~~~~c~~~~~ 555 (851)
||.| .++|.....
T Consensus 741 cg~~---l~~C~~~~~ 753 (768)
T 3rgz_A 741 CGYP---LPRCDPSNA 753 (768)
T ss_dssp ESTT---SCCCCSCC-
T ss_pred cCCC---CcCCCCCcc
Confidence 9998 457866554
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2e-65 Score=614.47 Aligned_cols=519 Identities=33% Similarity=0.490 Sum_probs=460.4
Q ss_pred cCCCCCCCCCCCEEeCcCCCCccCCCc--cccCCCCCCEEEcCCCcccccccC---CCCCCCcEEeCCCCCCCCCCCcch
Q 046438 9 VPSQLGSLSSLQYLDLSFNQLLGTIPS--SIFSINTLEILDLSNNQLSGSFPF---FNMSSLQVIDLSDNRLSGELPANI 83 (851)
Q Consensus 9 ~p~~l~~l~~L~~L~ls~n~l~~~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~---~~~~~L~~L~Ls~n~l~~~~~~~~ 83 (851)
+|+.++++++|++|||++|.+++.+|. .++.+++|++|+|++|.+++..+. ..+++|++|||++|++++..|...
T Consensus 92 l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 171 (768)
T 3rgz_A 92 SVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGW 171 (768)
T ss_dssp CCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHH
T ss_pred CchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhh
Confidence 448999999999999999999998998 999999999999999999986662 689999999999999996555432
Q ss_pred --hcCCcccccccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCc
Q 046438 84 --FSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNIST 161 (851)
Q Consensus 84 --~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 161 (851)
+..+++|++|+|++|.+++..|. ..+++|++|+|++|.+++.+|. ++++++|++|++++|++++..|..+.++++
T Consensus 172 ~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~ 248 (768)
T 3rgz_A 172 VLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTE 248 (768)
T ss_dssp HHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSS
T ss_pred hhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCC
Confidence 78999999999999999976654 8899999999999999987877 999999999999999999999999999999
Q ss_pred CcEEEeeccccccccchhHhhhcccccccccccccccccCCcccccc-CCCcEEecCCCCCccccCccccCCCCcceEec
Q 046438 162 LKILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNA-SKLSICELPDNSFSGFIPNRFHNMRNLKELNL 240 (851)
Q Consensus 162 L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 240 (851)
|++|++++|++++.++.. .+++|++|++++|.+++.+|..+... ++|+.|+|++|.+++..|..|+++++|++|+|
T Consensus 249 L~~L~Ls~n~l~~~~~~~---~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 325 (768)
T 3rgz_A 249 LKLLNISSNQFVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLAL 325 (768)
T ss_dssp CCEEECCSSCCEESCCCC---CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEEC
T ss_pred CCEEECCCCcccCccCcc---ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEEC
Confidence 999999999999777764 78999999999999999999998876 99999999999999999999999999999999
Q ss_pred cCcccc-CCCCcchhhhhccccccccEEeccCCCccCCCCCCccccc--------------------------cccccEE
Q 046438 241 EYNYIT-SSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNL--------------------------SLSMERF 293 (851)
Q Consensus 241 ~~N~i~-~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~--------------------------~~~L~~L 293 (851)
++|.++ .++. ..+..+++|++|++++|++. ..+|..+..+ ..+|+.|
T Consensus 326 ~~n~l~~~ip~-----~~l~~l~~L~~L~Ls~n~l~-~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L 399 (768)
T 3rgz_A 326 SSNNFSGELPM-----DTLLKMRGLKVLDLSFNEFS-GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQEL 399 (768)
T ss_dssp CSSEEEEECCH-----HHHTTCTTCCEEECCSSEEE-ECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEE
T ss_pred CCCcccCcCCH-----HHHhcCCCCCEEeCcCCccC-ccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEE
Confidence 999997 4332 23667777777777777764 2344444333 2357788
Q ss_pred EeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccC
Q 046438 294 YLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLS 373 (851)
Q Consensus 294 ~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 373 (851)
++++|++++.+|..+.++++|++|++++|.+++..|..+..+++|++|++++|.+.+.+|..+..+++|+.|++++|++.
T Consensus 400 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 479 (768)
T 3rgz_A 400 YLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 479 (768)
T ss_dssp ECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCC
T ss_pred ECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCccc
Confidence 88888888888889999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCccccceecccCcCc-cCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCccc-
Q 046438 374 GSIPACFGNLASLRKLSFASNELT-FVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTI- 451 (851)
Q Consensus 374 ~~~~~~~~~l~~L~~L~L~~N~l~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~- 451 (851)
+.+|..+..+++|++|++++|+++ .+|..++.+++|++|+|++|++++.+|..++.+++|+.|++++|++++.+|..+
T Consensus 480 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~ 559 (768)
T 3rgz_A 480 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGG
T ss_pred CcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHh
Confidence 999999999999999999999998 788899999999999999999999999999999999999999999987776543
Q ss_pred ---------------------------------------------------------------------CCCCCccEEEc
Q 046438 452 ---------------------------------------------------------------------GGLKNLQNLSL 462 (851)
Q Consensus 452 ---------------------------------------------------------------------~~l~~L~~L~L 462 (851)
+.+++|+.|||
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdL 639 (768)
T 3rgz_A 560 KQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDM 639 (768)
T ss_dssp TTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEEC
T ss_pred cccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEEC
Confidence 34577999999
Q ss_pred cCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCC-CcccccCcccccCCcCc
Q 046438 463 GDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRG-GTLANFTSESFMGNDLL 539 (851)
Q Consensus 463 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~-~~~~~l~~~~~~~n~~~ 539 (851)
++|+++|.+|.+++.+++|+.|+|++|+++|.+|..+..+++|+.|+|++|+++|.+|.. ..+..+...++.+|+..
T Consensus 640 s~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 640 SYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp CSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred cCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence 999999999999999999999999999999999999999999999999999999999865 45777888888888643
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.3e-58 Score=548.73 Aligned_cols=530 Identities=25% Similarity=0.267 Sum_probs=332.8
Q ss_pred cCCCCCCCCCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhcC
Q 046438 9 VPSQLGSLSSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFSY 86 (851)
Q Consensus 9 ~p~~l~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~~ 86 (851)
+|..+. +++++|+|++|++++..+.+|..+++|++|+|++|++++..+ +..+++|++|+|++|+++ .+|...|+.
T Consensus 19 ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~ 95 (680)
T 1ziw_A 19 VPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS-QLSDKTFAF 95 (680)
T ss_dssp CCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCC-CCCTTTTTT
T ss_pred cccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccC-ccChhhhcc
Confidence 444443 445555555555554444445555555555555555554333 344555555555555554 444444455
Q ss_pred CcccccccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCcccc--CCCcCcE
Q 046438 87 LPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLF--NISTLKI 164 (851)
Q Consensus 87 l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~--~l~~L~~ 164 (851)
+++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|++++|++++..+..+. .+++|+.
T Consensus 96 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 175 (680)
T 1ziw_A 96 CTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKK 175 (680)
T ss_dssp CTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESE
T ss_pred CCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccE
Confidence 55555555555555544444455555555555555555544444455555555555555555444443332 2344555
Q ss_pred EEeeccccccccchhHhh--------------------------hcccccccccccccccccCCccccccCC--CcEEec
Q 046438 165 LQLTNNTLSGSISSSIRL--------------------------ALPNLELFSLANNNFSGKIPSFIFNASK--LSICEL 216 (851)
Q Consensus 165 L~L~~n~l~~~~~~~~~~--------------------------~l~~L~~L~L~~N~i~~~~~~~~~~~~~--L~~L~L 216 (851)
|++++|.+++..+..+.. ..++|+.|++++|.+++..|..+.+++. |+.|+|
T Consensus 176 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~L 255 (680)
T 1ziw_A 176 LELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 255 (680)
T ss_dssp EECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEEC
T ss_pred EECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEEC
Confidence 555555444322221110 1134555555555555555555555433 566666
Q ss_pred CCCCCccccCccccCCCCcceEeccCccccCCCCcc------------------------hh----hhhccccccccEEe
Q 046438 217 PDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHEL------------------------SF----ISSLANSKKLKVLS 268 (851)
Q Consensus 217 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~------------------------~~----~~~l~~l~~L~~L~ 268 (851)
++|.++++.+..|+.+++|++|++++|+++...... .. ...+..+++|++|+
T Consensus 256 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~ 335 (680)
T 1ziw_A 256 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLN 335 (680)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEE
T ss_pred CCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEE
Confidence 666555555555555555666666555555432110 00 00234455555555
Q ss_pred ccCCCccCCCCCCccccccccccEEEeecCcccc--CCCcccccc--cCCcEEEecCCCCCCCcCccccCCCCCcEEEcc
Q 046438 269 LTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRG--SIPKEMGNL--INLIIIRLGYNKLNGSIPSTLSRLEKLQILGLE 344 (851)
Q Consensus 269 Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~--~~p~~l~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 344 (851)
+++|++.. ..+..+..+ .+|+.|++++|.+.. ..+..+..+ ++|+.|++++|++.+..|.+|..+++|+.|+++
T Consensus 336 l~~n~l~~-~~~~~~~~l-~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 413 (680)
T 1ziw_A 336 MEDNDIPG-IKSNMFTGL-INLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLG 413 (680)
T ss_dssp CCSCCBCC-CCTTTTTTC-TTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCCccCC-CChhHhccc-cCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCC
Confidence 55555532 112222222 245555555554321 111222222 356666666677776777788888888888888
Q ss_pred ccccccccc-ccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCc---cCchhhcccCcceEEEecCCCCC
Q 046438 345 NNQLEGRIL-DDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELT---FVPSTFWNLTNILMVDLSSNPLS 420 (851)
Q Consensus 345 ~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~---~~p~~~~~l~~L~~L~Ls~N~l~ 420 (851)
+|.+.+.++ ..+..+++|+.|++++|++.+..+..|..+++|+.|++++|.++ .+|..+.++++|+.|+|++|+++
T Consensus 414 ~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~ 493 (680)
T 1ziw_A 414 LNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIA 493 (680)
T ss_dssp SSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCC
T ss_pred CCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCC
Confidence 888876554 67788888888888888888778888888888999999888875 56788899999999999999999
Q ss_pred CCCccccccchhhhhhhccCCcccccCC--------cccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCccc
Q 046438 421 GSLPLEIGNLKVLVELYLSRNNLSGDIP--------TTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILS 492 (851)
Q Consensus 421 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~--------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 492 (851)
+..+..|.++++|++|++++|++++..+ ..|.++++|+.|+|++|+++...+..|.++++|+.|+|++|+++
T Consensus 494 ~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~ 573 (680)
T 1ziw_A 494 NINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLN 573 (680)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred cCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCC
Confidence 8888889999999999999999985422 23788999999999999998555567899999999999999999
Q ss_pred ccCCccccccccccceeccCccccccCCCCC--cccccCcccccCCcCccCCC
Q 046438 493 GIIPSSLEKLLYLKYLNVSFNRLEGEIPRGG--TLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 493 ~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~--~~~~l~~~~~~~n~~~c~~~ 543 (851)
+..+..|..+++|+.|++++|++++..|..- .+..+..+.+.+||+.|+++
T Consensus 574 ~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 574 TLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred cCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 7777778899999999999999998776432 46788888999999999876
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=9e-58 Score=543.61 Aligned_cols=516 Identities=22% Similarity=0.247 Sum_probs=430.1
Q ss_pred CCcccccCCCCCCCCCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCC
Q 046438 3 SFLTGTVPSQLGSLSSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELP 80 (851)
Q Consensus 3 ~~~~~~~p~~l~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~ 80 (851)
+.+++..|..+.++++|++|+|++|++++..|.++..+++|++|+|++|++++.++ +..+++|++|++++|+++ .++
T Consensus 35 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~-~~~ 113 (680)
T 1ziw_A 35 NQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ-KIK 113 (680)
T ss_dssp SCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCC
T ss_pred CCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccC-ccC
Confidence 55677555679999999999999999999899999999999999999999998765 789999999999999998 677
Q ss_pred cchhcCCcccccccccccccccCCCccccCCCCccEEeccccccccccchhhc--CcccccEEEccCccccCCCCccccC
Q 046438 81 ANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIG--NLRNLQALGLLSNNLVGVVPATLFN 158 (851)
Q Consensus 81 ~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~l~~ 158 (851)
+..|+.+++|++|+|++|.+++..|..++++++|++|++++|.+++..+..+. .+++|++|++++|++.+..|..+..
T Consensus 114 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~ 193 (680)
T 1ziw_A 114 NNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHA 193 (680)
T ss_dssp SCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGG
T ss_pred hhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhh
Confidence 77789999999999999999988899999999999999999999977777665 4589999999999998887776654
Q ss_pred C---------------------------CcCcEEEeeccccccccchhHhhhccc--ccccccccccccccCCccccccC
Q 046438 159 I---------------------------STLKILQLTNNTLSGSISSSIRLALPN--LELFSLANNNFSGKIPSFIFNAS 209 (851)
Q Consensus 159 l---------------------------~~L~~L~L~~n~l~~~~~~~~~~~l~~--L~~L~L~~N~i~~~~~~~~~~~~ 209 (851)
+ ++|+.|++++|.+++..+.. +..++. |++|+|++|++++..|..+.+++
T Consensus 194 l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~-~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 272 (680)
T 1ziw_A 194 IGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT-FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLP 272 (680)
T ss_dssp SSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTT-TGGGGGSCCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhH-hhccCcCCCCEEECCCCCcCccCcccccCcc
Confidence 4 34566666666666444433 334433 77777777777776677777777
Q ss_pred CCcEEecCCCCCccccCcc---------------------------------ccCCCCcceEeccCccccCCCCcchhhh
Q 046438 210 KLSICELPDNSFSGFIPNR---------------------------------FHNMRNLKELNLEYNYITSSNHELSFIS 256 (851)
Q Consensus 210 ~L~~L~L~~n~l~~~~~~~---------------------------------~~~l~~L~~L~L~~N~i~~~~~~~~~~~ 256 (851)
+|+.|++++|.+++..+.. |..+++|++|++++|.++.++. .
T Consensus 273 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~-----~ 347 (680)
T 1ziw_A 273 QLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKS-----N 347 (680)
T ss_dssp TCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCT-----T
T ss_pred cccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCCh-----h
Confidence 7777777777776665544 4455666666666676665432 3
Q ss_pred hccccccccEEeccCCCccCCCCCCccc-cc-cccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcC-cccc
Q 046438 257 SLANSKKLKVLSLTGNPLLDCVLPSSIG-NL-SLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIP-STLS 333 (851)
Q Consensus 257 ~l~~l~~L~~L~Ls~N~l~~~~~p~~~~-~~-~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~~~~ 333 (851)
.+..+++|++|++++|.+....++.... .. ..+|+.|++++|++++..|..+..+++|++|++++|.+.+.+| ..|.
T Consensus 348 ~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 427 (680)
T 1ziw_A 348 MFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWR 427 (680)
T ss_dssp TTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGT
T ss_pred HhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCccccc
Confidence 4778999999999999865444443322 22 1479999999999999999999999999999999999987555 6899
Q ss_pred CCCCCcEEEcccccccccccccccccCCCCEEEccCcccC--CCCCccccCCccccceecccCcCccCch-hhcccCcce
Q 046438 334 RLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLS--GSIPACFGNLASLRKLSFASNELTFVPS-TFWNLTNIL 410 (851)
Q Consensus 334 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~p~-~~~~l~~L~ 410 (851)
.+++|++|++++|.+.+..+..+..+++|+.|++++|.+. +..|..|..+++|+.|++++|+++.+|. .+.++++|+
T Consensus 428 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~ 507 (680)
T 1ziw_A 428 GLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLE 507 (680)
T ss_dssp TCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccC
Confidence 9999999999999999998999999999999999999987 5788999999999999999999998875 588999999
Q ss_pred EEEecCCCCCCCCc--------cccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCC
Q 046438 411 MVDLSSNPLSGSLP--------LEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLE 482 (851)
Q Consensus 411 ~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 482 (851)
+|+|++|++++..+ ..|.++++|++|+|++|+++...+..|.++++|+.|+|++|++++..+..|.++++|+
T Consensus 508 ~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~ 587 (680)
T 1ziw_A 508 ILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLK 587 (680)
T ss_dssp EEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred EEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCC
Confidence 99999999985422 2378899999999999999955456799999999999999999977777889999999
Q ss_pred EEECCCCcccccCCcccc-ccccccceeccCccccccCCCCCcc
Q 046438 483 CLDLSNNILSGIIPSSLE-KLLYLKYLNVSFNRLEGEIPRGGTL 525 (851)
Q Consensus 483 ~L~Ls~N~l~~~~p~~l~-~l~~L~~l~l~~N~l~~~~p~~~~~ 525 (851)
.|+|++|+|++..|..+. .+++|+.|++++|+|.|+|+...+|
T Consensus 588 ~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~ 631 (680)
T 1ziw_A 588 SLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWF 631 (680)
T ss_dssp EEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSSE
T ss_pred EEECCCCcCCccChhHhcccccccCEEEccCCCcccCCccHHHH
Confidence 999999999988888887 8999999999999999999863333
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.4e-57 Score=534.71 Aligned_cols=503 Identities=21% Similarity=0.212 Sum_probs=420.4
Q ss_pred ccCCCCCCCCCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhc
Q 046438 8 TVPSQLGSLSSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFS 85 (851)
Q Consensus 8 ~~p~~l~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 85 (851)
++|..+. +++++|||++|+++++.|.+|..+++|++|+|++|++++..| +..+++|++|+|++|+++ .+++..|+
T Consensus 26 ~iP~~l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~ 102 (606)
T 3t6q_A 26 EIPGTLP--NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLI-FMAETALS 102 (606)
T ss_dssp SCCTTSC--TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCS-EECTTTTS
T ss_pred cCcCCCC--CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCccc-ccChhhhc
Confidence 5777775 478999999999998889999999999999999999987655 789999999999999998 55555689
Q ss_pred CCcccccccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCc--
Q 046438 86 YLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLK-- 163 (851)
Q Consensus 86 ~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~-- 163 (851)
.+++|++|+|++|.+++..+..++++++|++|+|++|.+++..+..+..+++|++|++++|++.+..|..+..+++|+
T Consensus 103 ~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l 182 (606)
T 3t6q_A 103 GPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNL 182 (606)
T ss_dssp SCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSE
T ss_pred ccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhccccee
Confidence 999999999999999987788899999999999999999875444555599999999999999988888899999999
Q ss_pred EEEeeccccccccchhHhhhccccccccccccccc--------------------------ccCCccccccC--CCcEEe
Q 046438 164 ILQLTNNTLSGSISSSIRLALPNLELFSLANNNFS--------------------------GKIPSFIFNAS--KLSICE 215 (851)
Q Consensus 164 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~--------------------------~~~~~~~~~~~--~L~~L~ 215 (851)
.|++++|.+++..+.. + ..++|++|++++|... ...+..+..+. +|+.|+
T Consensus 183 ~L~l~~n~l~~~~~~~-~-~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~ 260 (606)
T 3t6q_A 183 SLNLNGNDIAGIEPGA-F-DSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESIN 260 (606)
T ss_dssp EEECTTCCCCEECTTT-T-TTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEE
T ss_pred EEecCCCccCccChhH-h-hhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEE
Confidence 8999999998554443 3 4468888888877511 11122222222 788999
Q ss_pred cCCCCCccccCccccCCCCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEe
Q 046438 216 LPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYL 295 (851)
Q Consensus 216 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L 295 (851)
+++|.++++.+..|+.+++|++|++++|.++.++. .+..+++|++|++++|++.. ..|..+..+. +|+.|++
T Consensus 261 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~------~l~~l~~L~~L~l~~n~l~~-~~~~~~~~l~-~L~~L~l 332 (606)
T 3t6q_A 261 LQKHYFFNISSNTFHCFSGLQELDLTATHLSELPS------GLVGLSTLKKLVLSANKFEN-LCQISASNFP-SLTHLSI 332 (606)
T ss_dssp CTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCS------SCCSCTTCCEEECTTCCCSB-GGGGCGGGCT-TCSEEEC
T ss_pred eecCccCccCHHHhccccCCCEEeccCCccCCCCh------hhcccccCCEEECccCCcCc-CchhhhhccC-cCCEEEC
Confidence 99999999888889999999999999999987653 36778899999999998863 2344555554 8999999
Q ss_pred ecCccccCCCc-ccccccCCcEEEecCCCCCCCc--CccccCCCCCcEEEcccccccccccccccccCCCCEEEccCccc
Q 046438 296 HNCNIRGSIPK-EMGNLINLIIIRLGYNKLNGSI--PSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKL 372 (851)
Q Consensus 296 ~~n~i~~~~p~-~l~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 372 (851)
++|++.+.+|. .+..+++|++|++++|.+.+.. +..+..+++|++|++++|.+.+..+..+..+++|+.|++++|++
T Consensus 333 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 412 (606)
T 3t6q_A 333 KGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRL 412 (606)
T ss_dssp CSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCE
T ss_pred CCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcC
Confidence 99998866654 4888999999999999998765 77888999999999999999988888899999999999999999
Q ss_pred CCCCCc-cccCCccccceecccCcCccC-chhhcccCcceEEEecCCCCCCC---CccccccchhhhhhhccCCcccccC
Q 046438 373 SGSIPA-CFGNLASLRKLSFASNELTFV-PSTFWNLTNILMVDLSSNPLSGS---LPLEIGNLKVLVELYLSRNNLSGDI 447 (851)
Q Consensus 373 ~~~~~~-~~~~l~~L~~L~L~~N~l~~~-p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~ 447 (851)
.+..+. .+..+++|++|++++|.++.. |..+..+++|++|++++|++.+. .+..+..+++|++|++++|++++..
T Consensus 413 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 492 (606)
T 3t6q_A 413 KVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSID 492 (606)
T ss_dssp ECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEEC
T ss_pred CCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccC
Confidence 876654 488899999999999999865 56788899999999999998762 3356888999999999999999888
Q ss_pred CcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCCc
Q 046438 448 PTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGT 524 (851)
Q Consensus 448 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~ 524 (851)
|..|+.+++|+.|+|++|++++..|..+..+++| .|+|++|++++.+|..+..+++|+.|++++|+|+|+|+..+.
T Consensus 493 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~ 568 (606)
T 3t6q_A 493 QHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIYF 568 (606)
T ss_dssp TTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGHHH
T ss_pred hhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcHHH
Confidence 8899999999999999999998889999999999 999999999988888899999999999999999999885433
No 6
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=6.1e-57 Score=529.21 Aligned_cols=499 Identities=22% Similarity=0.218 Sum_probs=414.3
Q ss_pred ccCCCCCCCCCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhc
Q 046438 8 TVPSQLGSLSSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFS 85 (851)
Q Consensus 8 ~~p~~l~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 85 (851)
.+|..+. +++++|+|++|++++..+.+|..+++|++|+|++|++++..| +..+++|++|+|++|+++ .+++..|+
T Consensus 25 ~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~-~~~p~~~~ 101 (606)
T 3vq2_A 25 KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQ-SFSPGSFS 101 (606)
T ss_dssp SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-CCCTTSST
T ss_pred cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCccc-ccChhhcC
Confidence 4777665 789999999999998888889999999999999999987655 788999999999999998 55445588
Q ss_pred CCcccccccccccccccCCCccccCCCCccEEecccccccc-ccchhhcCcccccEEEccCccccCCCCccccCCCcCc-
Q 046438 86 YLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMG-EIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLK- 163 (851)
Q Consensus 86 ~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~- 163 (851)
++++|++|+|++|.+++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..+..+..+++|+
T Consensus 102 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 181 (606)
T 3vq2_A 102 GLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQ 181 (606)
T ss_dssp TCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTT
T ss_pred CcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhcccc
Confidence 89999999999999987777889999999999999999985 5688999999999999999999988888887776655
Q ss_pred ---EEEeeccccccccchhHhhhccccccccccccccc-ccCCccccccCCCcEEec-----------------------
Q 046438 164 ---ILQLTNNTLSGSISSSIRLALPNLELFSLANNNFS-GKIPSFIFNASKLSICEL----------------------- 216 (851)
Q Consensus 164 ---~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~~~~L~~L~L----------------------- 216 (851)
.|++++|.++ .++...+... +|++|++++|.++ +..|..+.+++.|+.+++
T Consensus 182 ~l~~L~l~~n~l~-~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~ 259 (606)
T 3vq2_A 182 VNLSLDMSLNPID-FIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLC 259 (606)
T ss_dssp CCCEEECTTCCCC-EECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGG
T ss_pred ccceeeccCCCcc-eeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhh
Confidence 7999999988 5555555443 8999999999886 455666667777766665
Q ss_pred ----------CCCCCccccCccccCCCCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccc
Q 046438 217 ----------PDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNL 286 (851)
Q Consensus 217 ----------~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~ 286 (851)
..|.+.+..|. +..+++|++|++++|.++.++ .+..+++|++|++++|++ ..+|. + .
T Consensus 260 ~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~-------~l~~~~~L~~L~l~~n~l--~~lp~-~--~ 326 (606)
T 3vq2_A 260 DVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE-------DVPKHFKWQSLSIIRCQL--KQFPT-L--D 326 (606)
T ss_dssp GSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC-------CCCTTCCCSEEEEESCCC--SSCCC-C--C
T ss_pred hccHhheeccccccccccccc-cccCCCCCEEEecCccchhhh-------hccccccCCEEEcccccC--ccccc-C--C
Confidence 66677777666 888899999999999887654 467788999999999998 45663 3 3
Q ss_pred cccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCC--cCccccCCCCCcEEEcccccccccccccccccCCCCE
Q 046438 287 SLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGS--IPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSS 364 (851)
Q Consensus 287 ~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 364 (851)
..+|+.|++++|+..+.. .+..+++|++|++++|.+++. .|..+..+++|++|++++|.+++ .+..+..+++|+.
T Consensus 327 l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~ 403 (606)
T 3vq2_A 327 LPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQH 403 (606)
T ss_dssp CSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCE
T ss_pred CCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCe
Confidence 348999999999655433 677889999999999998865 37788889999999999999885 4578888999999
Q ss_pred EEccCcccCCCCC-ccccCCccccceecccCcCcc-CchhhcccCcceEEEecCCCCCC-CCccccccchhhhhhhccCC
Q 046438 365 VYLDHNKLSGSIP-ACFGNLASLRKLSFASNELTF-VPSTFWNLTNILMVDLSSNPLSG-SLPLEIGNLKVLVELYLSRN 441 (851)
Q Consensus 365 L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~-~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N 441 (851)
|++++|++.+..+ ..|..+++|++|++++|+++. .|..+.++++|++|++++|++++ .+|..|+.+++|++|++++|
T Consensus 404 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n 483 (606)
T 3vq2_A 404 LDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKC 483 (606)
T ss_dssp EECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred eECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCC
Confidence 9999999987777 688889999999999999885 56778889999999999999987 47888899999999999999
Q ss_pred cccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccc-cccceeccCccccccCC
Q 046438 442 NLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLL-YLKYLNVSFNRLEGEIP 520 (851)
Q Consensus 442 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~l~l~~N~l~~~~p 520 (851)
++++..|..|+.+++|++|+|++|++++..|..+.++++|++|+|++|+++ .+|..+..++ +|+.|++++|+|.|.|+
T Consensus 484 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 484 QLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred cCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 999888888999999999999999999888899999999999999999998 6777788887 59999999999999988
Q ss_pred CCCccccc
Q 046438 521 RGGTLANF 528 (851)
Q Consensus 521 ~~~~~~~l 528 (851)
..+...++
T Consensus 563 ~~~~~~~l 570 (606)
T 3vq2_A 563 HQKFLQWV 570 (606)
T ss_dssp THHHHTTT
T ss_pred cHHHHHHH
Confidence 65433333
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5e-56 Score=521.42 Aligned_cols=510 Identities=21% Similarity=0.228 Sum_probs=450.2
Q ss_pred CCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhcCCccccccccc
Q 046438 19 LQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLA 96 (851)
Q Consensus 19 L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~ 96 (851)
-+.++.++..++ .+|..+.. ++++|+|++|++++..+ +..+++|++|||++|+++ .+++..|+.+++|++|+|+
T Consensus 14 ~~~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls 89 (606)
T 3t6q_A 14 NKTYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIY-WIHEDTFQSQHRLDTLVLT 89 (606)
T ss_dssp TTEEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCC-EECTTTTTTCTTCCEEECT
T ss_pred CceEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccc-eeChhhccCccccCeeeCC
Confidence 457899999998 67876654 79999999999998755 889999999999999998 5655669999999999999
Q ss_pred ccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeecccccccc
Q 046438 97 FNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNTLSGSI 176 (851)
Q Consensus 97 ~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 176 (851)
+|++++..|..|+++++|++|+|++|.+++..+..|+++++|++|++++|++.+..+..+..+++|++|++++|.++ .+
T Consensus 90 ~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~ 168 (606)
T 3t6q_A 90 ANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIH-YL 168 (606)
T ss_dssp TCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCC-EE
T ss_pred CCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCccc-cc
Confidence 99999999999999999999999999999777888999999999999999999866566667999999999999998 45
Q ss_pred chhHhhhccccc--ccccccccccccCCccccccCCCcEEecCCCCC--------------------------ccccCcc
Q 046438 177 SSSIRLALPNLE--LFSLANNNFSGKIPSFIFNASKLSICELPDNSF--------------------------SGFIPNR 228 (851)
Q Consensus 177 ~~~~~~~l~~L~--~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l--------------------------~~~~~~~ 228 (851)
+...+..+++|+ .|++++|.+++..|..+. ..+|+.|++++|.. ..+.+..
T Consensus 169 ~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~ 247 (606)
T 3t6q_A 169 SKEDMSSLQQATNLSLNLNGNDIAGIEPGAFD-SAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAV 247 (606)
T ss_dssp CHHHHHTTTTCCSEEEECTTCCCCEECTTTTT-TCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGG
T ss_pred ChhhhhhhcccceeEEecCCCccCccChhHhh-hccccccccCCchhHHHHhhhccccchhheechhhccccccccChhH
Confidence 555566899999 899999999988777654 46889999888751 1222344
Q ss_pred ccCCC--CcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCc
Q 046438 229 FHNMR--NLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPK 306 (851)
Q Consensus 229 ~~~l~--~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~ 306 (851)
|.++. +|++|++++|.++.++. ..+..+++|++|++++|++. .+|..+..+. +|+.|++++|++.+..|.
T Consensus 248 ~~~l~~~~L~~L~l~~n~l~~~~~-----~~~~~l~~L~~L~l~~n~l~--~lp~~l~~l~-~L~~L~l~~n~l~~~~~~ 319 (606)
T 3t6q_A 248 FEGLCEMSVESINLQKHYFFNISS-----NTFHCFSGLQELDLTATHLS--ELPSGLVGLS-TLKKLVLSANKFENLCQI 319 (606)
T ss_dssp GGGGGGSEEEEEECTTCCCSSCCT-----TTTTTCTTCSEEECTTSCCS--CCCSSCCSCT-TCCEEECTTCCCSBGGGG
T ss_pred hchhhcCceeEEEeecCccCccCH-----HHhccccCCCEEeccCCccC--CCChhhcccc-cCCEEECccCCcCcCchh
Confidence 44443 79999999999988764 34788999999999999996 5788877765 899999999999988899
Q ss_pred ccccccCCcEEEecCCCCCCCcCc-cccCCCCCcEEEcccccccccc--cccccccCCCCEEEccCcccCCCCCccccCC
Q 046438 307 EMGNLINLIIIRLGYNKLNGSIPS-TLSRLEKLQILGLENNQLEGRI--LDDICRLARLSSVYLDHNKLSGSIPACFGNL 383 (851)
Q Consensus 307 ~l~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 383 (851)
.+..+++|++|++++|.+.+..|. .+..+++|++|++++|.+++.. +..+..+++|+.|++++|++.+..|..|..+
T Consensus 320 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 399 (606)
T 3t6q_A 320 SASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKEC 399 (606)
T ss_dssp CGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTC
T ss_pred hhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCC
Confidence 999999999999999999865554 5899999999999999999876 7789999999999999999998889999999
Q ss_pred ccccceecccCcCccC-c-hhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCccccc---CCcccCCCCCcc
Q 046438 384 ASLRKLSFASNELTFV-P-STFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGD---IPTTIGGLKNLQ 458 (851)
Q Consensus 384 ~~L~~L~L~~N~l~~~-p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~ 458 (851)
++|++|++++|+++.. | ..+..+++|+.|++++|.+.+..|..++.+++|++|++++|++++. .+..+..+++|+
T Consensus 400 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 400 PQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp TTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred ccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCcc
Confidence 9999999999999865 3 3488999999999999999988999999999999999999999863 336799999999
Q ss_pred EEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCC-CcccccCcccccCCc
Q 046438 459 NLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRG-GTLANFTSESFMGND 537 (851)
Q Consensus 459 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~-~~~~~l~~~~~~~n~ 537 (851)
+|++++|++++..|..|+.+++|++|+|++|++++..|..+..++.| .|++++|++++.+|.. ..+..+..+.+.+||
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 558 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNP 558 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCC
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCC
Confidence 99999999998889999999999999999999999999999999999 9999999999887764 457888999999999
Q ss_pred CccCCC
Q 046438 538 LLCGSP 543 (851)
Q Consensus 538 ~~c~~~ 543 (851)
+.|+++
T Consensus 559 ~~c~c~ 564 (606)
T 3t6q_A 559 LDCTCS 564 (606)
T ss_dssp EECSGG
T ss_pred ccccCC
Confidence 999876
No 8
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2e-55 Score=533.15 Aligned_cols=488 Identities=24% Similarity=0.266 Sum_probs=324.8
Q ss_pred cCCCCCCCCCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCcccccc-c--CCCCCCCcEEeCCCCCCCCCCCcchhc
Q 046438 9 VPSQLGSLSSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSF-P--FFNMSSLQVIDLSDNRLSGELPANIFS 85 (851)
Q Consensus 9 ~p~~l~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 85 (851)
+|. -.++|++|||++|+|++..|..|..+++|++|+|++|...+.+ + +.++++|++|+|++|.++ .+++..|.
T Consensus 19 vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~-~~~p~~~~ 94 (844)
T 3j0a_A 19 VPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIY-FLHPDAFQ 94 (844)
T ss_dssp CCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCC-EECTTSSC
T ss_pred CCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCc-ccCHhHcc
Confidence 776 3578999999999999888999999999999999999655433 3 788999999999999998 55455688
Q ss_pred CCcccccccccccccccCCCcc--ccCCCCccEEeccccccccccc-hhhcCcccccEEEccCccccCCCCccccCC--C
Q 046438 86 YLPFVQFLSLAFNQFAGHLPRE--IGNLTSLTSIDLSENHLMGEIP-HEIGNLRNLQALGLLSNNLVGVVPATLFNI--S 160 (851)
Q Consensus 86 ~l~~L~~L~L~~N~i~~~~~~~--l~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l--~ 160 (851)
.+++|++|+|++|.+++..|.. |+++++|++|+|++|.+++..+ ..|+++++|++|++++|++++..+..+..+ +
T Consensus 95 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~ 174 (844)
T 3j0a_A 95 GLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGK 174 (844)
T ss_dssp SCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHC
T ss_pred CCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCC
Confidence 9999999999999998766654 8999999999999999987654 678999999999999999998888888877 8
Q ss_pred cCcEEEeeccccccccchhHhhhcc------cccccccccccccccCCcccccc--------------------------
Q 046438 161 TLKILQLTNNTLSGSISSSIRLALP------NLELFSLANNNFSGKIPSFIFNA-------------------------- 208 (851)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~~~~~l~------~L~~L~L~~N~i~~~~~~~~~~~-------------------------- 208 (851)
+|+.|++++|.+.+..+..+. .++ .|++|++++|.+++..+..+...
T Consensus 175 ~L~~L~L~~n~l~~~~~~~~~-~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~ 253 (844)
T 3j0a_A 175 TLSFFSLAANSLYSRVSVDWG-KCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIK 253 (844)
T ss_dssp SSCCCEECCSBSCCCCCCCCC-SSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSST
T ss_pred ccceEECCCCccccccccchh-hcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccC
Confidence 899999999998876655432 223 48999999998877666655432
Q ss_pred ------------CCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccC
Q 046438 209 ------------SKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLD 276 (851)
Q Consensus 209 ------------~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 276 (851)
++|+.|+|++|.+.+..+..|..+++|++|+|++|.++.... ..+..+++|++|++++|++..
T Consensus 254 ~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-----~~~~~l~~L~~L~Ls~N~l~~ 328 (844)
T 3j0a_A 254 DPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIAD-----EAFYGLDNLQVLNLSYNLLGE 328 (844)
T ss_dssp TGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECT-----TTTTTCSSCCEEEEESCCCSC
T ss_pred CCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCCh-----HHhcCCCCCCEEECCCCCCCc
Confidence 345555555555555555555555555555555555554321 234455555555555555532
Q ss_pred CCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccc
Q 046438 277 CVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDI 356 (851)
Q Consensus 277 ~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 356 (851)
..|..+..+. +|+.|++++|++.+..+..|..+++|++|++++|.+++. ..+++|+.|++++|+++.. |..
T Consensus 329 -~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~~l-~~~- 399 (844)
T 3j0a_A 329 -LYSSNFYGLP-KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLVTL-PKI- 399 (844)
T ss_dssp -CCSCSCSSCT-TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCCCC-CCC-
T ss_pred -cCHHHhcCCC-CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcccc-ccc-
Confidence 1233333332 555555555555555555555555555555555555422 1245555555555555522 211
Q ss_pred cccCCCCEEEccCcccCCCC-CccccCCccccceecccCcCccCch--hhcccCcceEEEecCCCCC-----CCCccccc
Q 046438 357 CRLARLSSVYLDHNKLSGSI-PACFGNLASLRKLSFASNELTFVPS--TFWNLTNILMVDLSSNPLS-----GSLPLEIG 428 (851)
Q Consensus 357 ~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~p~--~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~ 428 (851)
...++.|++++|++.+.. +..+..+++|+.|+|++|+++.++. .+..+++|+.|+|++|.++ +..+..|.
T Consensus 400 --~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 477 (844)
T 3j0a_A 400 --NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFE 477 (844)
T ss_dssp --CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSS
T ss_pred --ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhc
Confidence 344556666666665432 1223456666666666666665433 2445666666677766665 23344566
Q ss_pred cchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccce
Q 046438 429 NLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYL 508 (851)
Q Consensus 429 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l 508 (851)
++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|..+ ++|+.|
T Consensus 478 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l 552 (844)
T 3j0a_A 478 GLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVL 552 (844)
T ss_dssp CBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEE
T ss_pred CcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEE
Confidence 666677777777777666666666677777777777777655555444 567777777777776666554 356666
Q ss_pred eccCccccccCCCC
Q 046438 509 NVSFNRLEGEIPRG 522 (851)
Q Consensus 509 ~l~~N~l~~~~p~~ 522 (851)
++++|+|.|+|+..
T Consensus 553 ~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 553 DITHNKFICECELS 566 (844)
T ss_dssp EEEEECCCCSSSCC
T ss_pred EecCCCcccccccH
Confidence 77777777766644
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=5.7e-55 Score=512.48 Aligned_cols=510 Identities=22% Similarity=0.200 Sum_probs=438.9
Q ss_pred CCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhcCCcccccccc
Q 046438 18 SLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSL 95 (851)
Q Consensus 18 ~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L 95 (851)
..+.++.++++++ .+|..+. ++|++|+|++|++++..+ +..+++|++||+++|+++ .+++..|.++++|++|+|
T Consensus 12 ~~~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~i~~~~~~~l~~L~~L~L 87 (606)
T 3vq2_A 12 PNITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIE-TIEDKAWHGLHHLSNLIL 87 (606)
T ss_dssp TTTEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEEC
T ss_pred CCCceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCccc-ccCHHHhhchhhcCEeEC
Confidence 3568999999998 6776554 899999999999998765 889999999999999998 666667999999999999
Q ss_pred cccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccC-CCCccccCCCcCcEEEeecccccc
Q 046438 96 AFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVG-VVPATLFNISTLKILQLTNNTLSG 174 (851)
Q Consensus 96 ~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~ 174 (851)
++|.+++..|+.|+++++|++|+|++|.+++..+..|+++++|++|++++|++.+ .+|..+.++++|++|++++|++++
T Consensus 88 s~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~ 167 (606)
T 3vq2_A 88 TGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQT 167 (606)
T ss_dssp TTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCE
T ss_pred CCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCccee
Confidence 9999998889999999999999999999998777889999999999999999987 469999999999999999999985
Q ss_pred ccchhHhhhccccc----ccccccccccccCCccccccCCCcEEecCCCCCc-cccCccccCCCCcceEeccCccccCC-
Q 046438 175 SISSSIRLALPNLE----LFSLANNNFSGKIPSFIFNASKLSICELPDNSFS-GFIPNRFHNMRNLKELNLEYNYITSS- 248 (851)
Q Consensus 175 ~~~~~~~~~l~~L~----~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~- 248 (851)
..+ ..+..+++|+ +|++++|.+++..+..+... +|+.|++++|.++ +..+..+.++++|+.+++..+.+...
T Consensus 168 ~~~-~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~ 245 (606)
T 3vq2_A 168 ITV-NDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDER 245 (606)
T ss_dssp ECT-TTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSC
T ss_pred cCh-hhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCC
Confidence 444 3444666665 79999999997776666554 8999999999987 45677788888888877744332211
Q ss_pred --------------------------CCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCcccc
Q 046438 249 --------------------------NHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRG 302 (851)
Q Consensus 249 --------------------------~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~ 302 (851)
..-......+..+++|+.|++++|.+.. +| .+.... +|+.|++++|++ +
T Consensus 246 ~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~--l~-~l~~~~-~L~~L~l~~n~l-~ 320 (606)
T 3vq2_A 246 NLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKY--LE-DVPKHF-KWQSLSIIRCQL-K 320 (606)
T ss_dssp CCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCC--CC-CCCTTC-CCSEEEEESCCC-S
T ss_pred cccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchh--hh-hccccc-cCCEEEcccccC-c
Confidence 0000112236788999999999999954 44 555544 899999999999 5
Q ss_pred CCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccc--cccccccCCCCEEEccCcccCCCCCccc
Q 046438 303 SIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRI--LDDICRLARLSSVYLDHNKLSGSIPACF 380 (851)
Q Consensus 303 ~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 380 (851)
.+| .+ .+++|+.|++++|...+.. .+..+++|++|++++|.+++.. +..+..+++|+.|++++|.+.+ +|..|
T Consensus 321 ~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~ 395 (606)
T 3vq2_A 321 QFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANF 395 (606)
T ss_dssp SCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCC
T ss_pred ccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhc
Confidence 778 45 9999999999999654333 6779999999999999999763 7888999999999999999985 66889
Q ss_pred cCCccccceecccCcCccCch--hhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccc-cCCcccCCCCCc
Q 046438 381 GNLASLRKLSFASNELTFVPS--TFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSG-DIPTTIGGLKNL 457 (851)
Q Consensus 381 ~~l~~L~~L~L~~N~l~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L 457 (851)
..+++|++|++++|+++.++. .+..+++|+.|++++|++.+..|..++.+++|++|++++|++++ ..|..|+.+++|
T Consensus 396 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 475 (606)
T 3vq2_A 396 MGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNL 475 (606)
T ss_dssp TTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC
T ss_pred cCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCC
Confidence 999999999999999997754 78899999999999999999899999999999999999999997 479999999999
Q ss_pred cEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCCccc-ccCcccccCC
Q 046438 458 QNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGTLA-NFTSESFMGN 536 (851)
Q Consensus 458 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~-~l~~~~~~~n 536 (851)
+.|+|++|++++..|..++.+++|++|+|++|++++.+|..+..+++|+.|++++|+++..++....++ .+..+.+.+|
T Consensus 476 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N 555 (606)
T 3vq2_A 476 TFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNN 555 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSC
T ss_pred CEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCC
Confidence 999999999999899999999999999999999999999999999999999999999995554434454 4888999999
Q ss_pred cCccCCC
Q 046438 537 DLLCGSP 543 (851)
Q Consensus 537 ~~~c~~~ 543 (851)
++.|+++
T Consensus 556 ~~~c~c~ 562 (606)
T 3vq2_A 556 SVACICE 562 (606)
T ss_dssp CCCCSST
T ss_pred CcccCCc
Confidence 9999887
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=8e-54 Score=519.19 Aligned_cols=499 Identities=22% Similarity=0.278 Sum_probs=377.1
Q ss_pred CEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhcCCcccccccccc
Q 046438 20 QYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAF 97 (851)
Q Consensus 20 ~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~ 97 (851)
+..|.++++++ .+|. -.++|++|||++|++++..+ +..+++|++|||++|...+.+++..|+.+++|++|+|++
T Consensus 7 ~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred eEEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 46788999998 5776 56899999999999998654 889999999999999777788778899999999999999
Q ss_pred cccccCCCccccCCCCccEEeccccccccccchh--hcCcccccEEEccCccccCCCC-ccccCCCcCcEEEeecccccc
Q 046438 98 NQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHE--IGNLRNLQALGLLSNNLVGVVP-ATLFNISTLKILQLTNNTLSG 174 (851)
Q Consensus 98 N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~ 174 (851)
|.|++..|+.|+++++|++|+|++|.+++.+|.. |+++++|++|+|++|++.+..+ ..|.++++|++|+|++|.+++
T Consensus 83 N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~ 162 (844)
T 3j0a_A 83 SKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL 162 (844)
T ss_dssp CCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC
T ss_pred CcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe
Confidence 9999999999999999999999999999766665 9999999999999999988765 578999999999999999986
Q ss_pred ccchhHhhhc--ccccccccccccccccCCccccccCC------CcEEecCCCCCccccCccccCC--------------
Q 046438 175 SISSSIRLAL--PNLELFSLANNNFSGKIPSFIFNASK------LSICELPDNSFSGFIPNRFHNM-------------- 232 (851)
Q Consensus 175 ~~~~~~~~~l--~~L~~L~L~~N~i~~~~~~~~~~~~~------L~~L~L~~n~l~~~~~~~~~~l-------------- 232 (851)
..+..+. .+ ++|+.|++++|.+.+..|..+..+.+ |+.|++++|.+++..+..+...
T Consensus 163 ~~~~~l~-~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~ 241 (844)
T 3j0a_A 163 VCEHELE-PLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHH 241 (844)
T ss_dssp CCSGGGH-HHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSS
T ss_pred eCHHHcc-cccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccc
Confidence 6665543 55 89999999999999988887766655 9999999998887666555432
Q ss_pred ------------------------CCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccc
Q 046438 233 ------------------------RNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSL 288 (851)
Q Consensus 233 ------------------------~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~ 288 (851)
++|++|+|++|.+..... ..+..+++|+.|++++|++.. ..|..+..+.
T Consensus 242 ~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~-----~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~- 314 (844)
T 3j0a_A 242 IMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNS-----RVFETLKDLKVLNLAYNKINK-IADEAFYGLD- 314 (844)
T ss_dssp CCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECS-----CCSSSCCCCCEEEEESCCCCE-ECTTTTTTCS-
T ss_pred cccccccccccCCCChhhhhccccCCccEEECCCCcccccCh-----hhhhcCCCCCEEECCCCcCCC-CChHHhcCCC-
Confidence 345555555555543321 224445555555555555432 1122333322
Q ss_pred cccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEcc
Q 046438 289 SMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLD 368 (851)
Q Consensus 289 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 368 (851)
+|+.|++++|++++..|..+..+++|+.|++++|.+.+..+..|..+++|++|+|++|.+++. ..+++|+.|+++
T Consensus 315 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~ 389 (844)
T 3j0a_A 315 NLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLS 389 (844)
T ss_dssp SCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEE
T ss_pred CCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccC
Confidence 455555555555544455555555555555555555544444555555555555555555422 114455555555
Q ss_pred CcccCCCCCccccCCccccceecccCcCccCch--hhcccCcceEEEecCCCCCCCCcc-ccccchhhhhhhccCCccc-
Q 046438 369 HNKLSGSIPACFGNLASLRKLSFASNELTFVPS--TFWNLTNILMVDLSSNPLSGSLPL-EIGNLKVLVELYLSRNNLS- 444 (851)
Q Consensus 369 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~- 444 (851)
+|++. .+|.. ..+++.|++++|+++.++. .+.++++|+.|+|++|++++..+. .+..+++|+.|+|++|.++
T Consensus 390 ~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~ 465 (844)
T 3j0a_A 390 GNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQL 465 (844)
T ss_dssp SCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSS
T ss_pred CCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCcccc
Confidence 55554 22222 3456666667776665543 356899999999999999865443 4567899999999999997
Q ss_pred ----ccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCC
Q 046438 445 ----GDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIP 520 (851)
Q Consensus 445 ----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p 520 (851)
+..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|++++.+|
T Consensus 466 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~ 543 (844)
T 3j0a_A 466 AWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNP 543 (844)
T ss_dssp SCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCS
T ss_pred ccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCCh
Confidence 34456789999999999999999998999999999999999999999987777776 899999999999999988
Q ss_pred CCCcccccCcccccCCcCccCCC
Q 046438 521 RGGTLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 521 ~~~~~~~l~~~~~~~n~~~c~~~ 543 (851)
.. +..+..+++.+||+.|+++
T Consensus 544 ~~--~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 544 DV--FVSLSVLDITHNKFICECE 564 (844)
T ss_dssp CC--CSSCCEEEEEEECCCCSSS
T ss_pred hH--hCCcCEEEecCCCcccccc
Confidence 54 6788899999999999775
No 11
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-52 Score=484.83 Aligned_cols=515 Identities=23% Similarity=0.285 Sum_probs=418.1
Q ss_pred ccCCCCCCCCCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhc
Q 046438 8 TVPSQLGSLSSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFS 85 (851)
Q Consensus 8 ~~p~~l~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 85 (851)
++|..+. +++++|+|++|++++..+.+|..+++|++|+|++|++++..+ +..+++|++|+|++|+++ .+++..|.
T Consensus 21 ~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~ 97 (570)
T 2z63_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFS 97 (570)
T ss_dssp SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTT
T ss_pred ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCC-ccCHhhhc
Confidence 4676653 578899999999988778888889999999999998887654 778889999999999887 66666788
Q ss_pred CCcccccccccccccccCCCccccCCCCccEEecccccccc-ccchhhcCcccccEEEccCccccCCCCccccCCCcC--
Q 046438 86 YLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMG-EIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTL-- 162 (851)
Q Consensus 86 ~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L-- 162 (851)
++++|++|+|++|.+++..+..++++++|++|++++|.+++ .+|..|+++++|++|++++|++++..+..+..+++|
T Consensus 98 ~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 177 (570)
T 2z63_A 98 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL 177 (570)
T ss_dssp TCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTT
T ss_pred CccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccch
Confidence 88999999999998887666678888899999999998886 368888888999999999898888777788877777
Q ss_pred --cEEEeeccccccccchhHhhhcccccccccccccccc-cCCccccccCCCcEEecCCC------CCccccCccccCCC
Q 046438 163 --KILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSG-KIPSFIFNASKLSICELPDN------SFSGFIPNRFHNMR 233 (851)
Q Consensus 163 --~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~~~~L~~L~L~~n------~l~~~~~~~~~~l~ 233 (851)
+.|++++|.+++..+ ..+... +|+.|++++|.... ..+..+..++.++.+.+.-. .+..+....|.+++
T Consensus 178 ~~~~L~l~~n~l~~~~~-~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~ 255 (570)
T 2z63_A 178 LNLSLDLSLNPMNFIQP-GAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLC 255 (570)
T ss_dssp CCCEEECTTCCCCEECT-TTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGG
T ss_pred hhhhcccCCCCceecCH-HHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhcccc
Confidence 788888888884443 344333 78888888875432 23445556666666554322 23334444555554
Q ss_pred C--cceEeccCc-cccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCccccc
Q 046438 234 N--LKELNLEYN-YITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGN 310 (851)
Q Consensus 234 ~--L~~L~L~~N-~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~ 310 (851)
+ ++.+++++| .+.... ...+..+++|++|++++|.+. .+|..+... +|+.|++++|++. .+|. ..
T Consensus 256 ~l~l~~l~l~~~~~~~~~~-----~~~~~~l~~L~~L~l~~~~l~--~l~~~~~~~--~L~~L~l~~n~~~-~l~~--~~ 323 (570)
T 2z63_A 256 NLTIEEFRLAYLDYYLDDI-----IDLFNCLTNVSSFSLVSVTIE--RVKDFSYNF--GWQHLELVNCKFG-QFPT--LK 323 (570)
T ss_dssp GSEEEEEEEEETTEEESCS-----TTTTGGGTTCSEEEEESCEEC--SCCBCCSCC--CCSEEEEESCBCS-SCCB--CB
T ss_pred ccchhhhhhhcchhhhhhc-----hhhhcCcCcccEEEecCccch--hhhhhhccC--CccEEeeccCccc-ccCc--cc
Confidence 3 456677666 444322 345778899999999999985 478777776 8999999999998 5555 57
Q ss_pred ccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccc--cccccccCCCCEEEccCcccCCCCCccccCCccccc
Q 046438 311 LINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRI--LDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRK 388 (851)
Q Consensus 311 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 388 (851)
+++|+.|++++|.+.+..+. ..+++|++|++++|.+++.. +..+..+++|+.|++++|++.+..+. +..+++|++
T Consensus 324 l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~ 400 (570)
T 2z63_A 324 LKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEH 400 (570)
T ss_dssp CSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCE
T ss_pred ccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCE
Confidence 89999999999998866554 78999999999999998765 67888999999999999999965544 999999999
Q ss_pred eecccCcCccCch--hhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCccc-ccCCcccCCCCCccEEEccCc
Q 046438 389 LSFASNELTFVPS--TFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLS-GDIPTTIGGLKNLQNLSLGDN 465 (851)
Q Consensus 389 L~L~~N~l~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N 465 (851)
|++++|+++..+. .+..+++|++|++++|.+.+..|..+.++++|++|++++|+++ +.+|..|..+++|+.|++++|
T Consensus 401 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n 480 (570)
T 2z63_A 401 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 480 (570)
T ss_dssp EECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred EEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCC
Confidence 9999999997643 6889999999999999999889999999999999999999998 578999999999999999999
Q ss_pred ccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCCcc-cccCc--ccccCCcCccCC
Q 046438 466 NLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGTL-ANFTS--ESFMGNDLLCGS 542 (851)
Q Consensus 466 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~-~~l~~--~~~~~n~~~c~~ 542 (851)
++++..|..|..+++|++|+|++|++++.+|..+..+++|+.|++++|+|+|.||....+ .++.. ..+.+.+ .|..
T Consensus 481 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~ 559 (570)
T 2z63_A 481 QLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSG 559 (570)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTT
T ss_pred ccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCch-hhCC
Confidence 999888999999999999999999999988888999999999999999999999987655 33333 2344554 7766
Q ss_pred C
Q 046438 543 P 543 (851)
Q Consensus 543 ~ 543 (851)
|
T Consensus 560 ~ 560 (570)
T 2z63_A 560 S 560 (570)
T ss_dssp T
T ss_pred C
Confidence 5
No 12
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.2e-51 Score=478.41 Aligned_cols=483 Identities=20% Similarity=0.240 Sum_probs=376.3
Q ss_pred ccCCCCCCCCCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhc
Q 046438 8 TVPSQLGSLSSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFS 85 (851)
Q Consensus 8 ~~p~~l~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 85 (851)
++|+.+. ++|++|+|++|++++..|.++..+++|++|+|++|++++..+ +..+++|++|||++|+++ .+++..|+
T Consensus 19 ~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~ 95 (549)
T 2z81_A 19 SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLS-SLSSSWFG 95 (549)
T ss_dssp SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC-SCCHHHHT
T ss_pred cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccC-ccCHHHhc
Confidence 5888775 789999999999998888999999999999999999998765 889999999999999998 67777789
Q ss_pred CCccccccccccccccc-CCCccccCCCCccEEecccccccccc-chhhcCcccccEEEccCccccCCCCccccCCCcCc
Q 046438 86 YLPFVQFLSLAFNQFAG-HLPREIGNLTSLTSIDLSENHLMGEI-PHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLK 163 (851)
Q Consensus 86 ~l~~L~~L~L~~N~i~~-~~~~~l~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 163 (851)
.+++|++|+|++|.+++ ..|..++++++|++|++++|.+.+.+ +..|+++++|++|++++|++.+..|..+..+++|+
T Consensus 96 ~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 175 (549)
T 2z81_A 96 PLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIH 175 (549)
T ss_dssp TCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEE
T ss_pred cCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCc
Confidence 99999999999999986 35678999999999999999844444 46899999999999999999988999999999999
Q ss_pred EEEeeccccccccchhHhhhcccccccccccccccccC---CccccccCCCcEEecCCCCCccccCc----cccCCCCcc
Q 046438 164 ILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKI---PSFIFNASKLSICELPDNSFSGFIPN----RFHNMRNLK 236 (851)
Q Consensus 164 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~~~~L~~L~L~~n~l~~~~~~----~~~~l~~L~ 236 (851)
+|+++.|.+. .++..++..+++|++|++++|++++.. ......+++|+.|++++|.+++..+. .+..+++|+
T Consensus 176 ~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~ 254 (549)
T 2z81_A 176 HLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELS 254 (549)
T ss_dssp EEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCC
T ss_pred eEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccc
Confidence 9999999886 666666667899999999999988642 12233467888888888887764433 345667788
Q ss_pred eEeccCccccCCCCcc-hhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCc
Q 046438 237 ELNLEYNYITSSNHEL-SFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLI 315 (851)
Q Consensus 237 ~L~L~~N~i~~~~~~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~ 315 (851)
.|++++|.+...+... .....+..+++|+.|++.++.+..... ...++..+....+|+
T Consensus 255 ~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~---------------------~~~l~~~~~~~~~L~ 313 (549)
T 2z81_A 255 EVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYL---------------------FYDLSTVYSLLEKVK 313 (549)
T ss_dssp EEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGG---------------------SCCCCHHHHHSTTCC
T ss_pred ccccccccccccccccccchhhhhhhcccccccccccccchhhh---------------------cccchhhhhhcccce
Confidence 8888888776543210 011223445555556555554421100 001222334456778
Q ss_pred EEEecCCCCCCCcCccc-cCCCCCcEEEcccccccccccc---cccccCCCCEEEccCcccCCCCC--ccccCCccccce
Q 046438 316 IIRLGYNKLNGSIPSTL-SRLEKLQILGLENNQLEGRILD---DICRLARLSSVYLDHNKLSGSIP--ACFGNLASLRKL 389 (851)
Q Consensus 316 ~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~---~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L 389 (851)
.|++++|.+. .+|..+ ..+++|++|++++|++++..+. .+..+++|+.|++++|++++..+ ..+..+++|++|
T Consensus 314 ~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L 392 (549)
T 2z81_A 314 RITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSL 392 (549)
T ss_dssp EEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEE
T ss_pred EEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEE
Confidence 8888888876 455544 5678888888888888765543 36677888888888888875432 457788888888
Q ss_pred ecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCC
Q 046438 390 SFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQG 469 (851)
Q Consensus 390 ~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 469 (851)
++++|+++.+|..+..+++|++|++++|+++ .+|..+ .++|++|++++|++++. +..+++|++|+|++|+|+
T Consensus 393 ~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~~~----~~~l~~L~~L~Ls~N~l~- 464 (549)
T 2z81_A 393 DISRNTFHPMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSF----SLFLPRLQELYISRNKLK- 464 (549)
T ss_dssp ECTTCCCCCCCSCCCCCTTCCEEECTTSCCS-CCCTTS--CTTCSEEECCSSCCSCC----CCCCTTCCEEECCSSCCS-
T ss_pred ECCCCCCccCChhhcccccccEEECCCCCcc-cccchh--cCCceEEECCCCChhhh----cccCChhcEEECCCCccC-
Confidence 8888888888888888888889999988887 444443 25889999999999853 257899999999999998
Q ss_pred CCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCCcc
Q 046438 470 SIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGTL 525 (851)
Q Consensus 470 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~ 525 (851)
.+|. ...+++|++|+|++|++++.+|..+..+++|+.|++++|+|+|.||...++
T Consensus 465 ~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~l 519 (549)
T 2z81_A 465 TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 519 (549)
T ss_dssp SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHHHHH
T ss_pred cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCccHHHH
Confidence 6776 567999999999999999999999999999999999999999999965444
No 13
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.1e-51 Score=483.87 Aligned_cols=470 Identities=18% Similarity=0.203 Sum_probs=286.0
Q ss_pred CCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccc------------ccCCCCCCCcEEeCCCCCCCCCCCcchh
Q 046438 17 SSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGS------------FPFFNMSSLQVIDLSDNRLSGELPANIF 84 (851)
Q Consensus 17 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~------------~~~~~~~~L~~L~Ls~n~l~~~~~~~~~ 84 (851)
.+++.|+|++|+++|.+|.+++.+++|++|+|++|.+... .|...+..|+ +++++|.+.+.+|..+.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~-l~l~~~~l~~~~~~~~~ 159 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMR-MHYQKTFVDYDPREDFS 159 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHH-THHHHHHTCCCGGGGSC
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHH-hhHHHhhhccCchhhHH
Confidence 4799999999999999999999999999999999987311 1111144566 77777777766665543
Q ss_pred cCCccccccccc--------------------ccccccCCCccccCCCCccEEeccccccccc-----------------
Q 046438 85 SYLPFVQFLSLA--------------------FNQFAGHLPREIGNLTSLTSIDLSENHLMGE----------------- 127 (851)
Q Consensus 85 ~~l~~L~~L~L~--------------------~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~----------------- 127 (851)
..+..+..+++. +|++++ +|..|+++++|++|+|++|.+++.
T Consensus 160 ~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ 238 (636)
T 4eco_A 160 DLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQY 238 (636)
T ss_dssp HHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHH
T ss_pred HHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhccc
Confidence 333333343433 567776 677777788888888888877764
Q ss_pred cchhhc--CcccccEEEccCccccCCCCccccCCCcCcEEEeeccc-ccc-ccchhHhh-----hccccccccccccccc
Q 046438 128 IPHEIG--NLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNT-LSG-SISSSIRL-----ALPNLELFSLANNNFS 198 (851)
Q Consensus 128 ~~~~~~--~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~-l~~-~~~~~~~~-----~l~~L~~L~L~~N~i~ 198 (851)
+|..++ ++++|++|++++|++.+.+|..+.++++|++|++++|+ +++ .+|..+.. .+++|++|++++|+++
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred CchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 777777 77777777777777777777777777777777777777 776 56655542 1266667777666666
Q ss_pred ccCCc--cccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccC
Q 046438 199 GKIPS--FIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLD 276 (851)
Q Consensus 199 ~~~~~--~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 276 (851)
.+|. .+.++++|+.|++++|.+++.+| .|..+++|++|+|++|+++.++. .+..+++
T Consensus 319 -~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~------~l~~l~~------------- 377 (636)
T 4eco_A 319 -TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPA------NFCGFTE------------- 377 (636)
T ss_dssp -SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCT------TSEEECT-------------
T ss_pred -ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccH------hhhhhcc-------------
Confidence 5555 56666666666666666665555 55556666666666665553221 1223333
Q ss_pred CCCCCccccccccccEEEeecCccccCCCccccccc--CCcEEEecCCCCCCCcCcccc-------CCCCCcEEEccccc
Q 046438 277 CVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLI--NLIIIRLGYNKLNGSIPSTLS-------RLEKLQILGLENNQ 347 (851)
Q Consensus 277 ~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~--~L~~L~L~~n~l~~~~~~~~~-------~l~~L~~L~L~~n~ 347 (851)
+|+.|++++|+++ .+|..+..++ +|++|++++|.+.+..|..+. .+++|++|++++|.
T Consensus 378 ------------~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~ 444 (636)
T 4eco_A 378 ------------QVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQ 444 (636)
T ss_dssp ------------TCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSC
T ss_pred ------------cCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCc
Confidence 1333333333333 3344444332 566666666666666666555 45555566666555
Q ss_pred ccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccCchhhcccCcceEEEecCCCCCCCCcccc
Q 046438 348 LEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEI 427 (851)
Q Consensus 348 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 427 (851)
+++..+..+..+++|+.|+|++|+++...+..+.... ..+.++++|+.|+|++|+++ .+|..+
T Consensus 445 l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~----------------~~~~~l~~L~~L~Ls~N~l~-~lp~~~ 507 (636)
T 4eco_A 445 ISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDEN----------------ENFKNTYLLTSIDLRFNKLT-KLSDDF 507 (636)
T ss_dssp CCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETT----------------EECTTGGGCCEEECCSSCCC-BCCGGG
T ss_pred cCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhcccc----------------ccccccCCccEEECcCCcCC-ccChhh
Confidence 5533333334455555555555555522222222111 00011125555555555555 444444
Q ss_pred c--cchhhhhhhccCCcccccCCcccCCCCCccEEEc------cCcccCCCCcccccCCCCCCEEECCCCcccccCCccc
Q 046438 428 G--NLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSL------GDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSL 499 (851)
Q Consensus 428 ~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L------~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l 499 (851)
. .+++|++|+|++|++++ +|..+..+++|+.|+| ++|++.+.+|..++.+++|++|+|++|+++ .+|..+
T Consensus 508 ~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~~ 585 (636)
T 4eco_A 508 RATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKI 585 (636)
T ss_dssp STTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSCC
T ss_pred hhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCC-ccCHhH
Confidence 4 55555555555555554 5555555555555555 567778888888888888888888888884 677766
Q ss_pred cccccccceeccCccccccCCCCC---cccccCcccccCCcCccCCC
Q 046438 500 EKLLYLKYLNVSFNRLEGEIPRGG---TLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 500 ~~l~~L~~l~l~~N~l~~~~p~~~---~~~~l~~~~~~~n~~~c~~~ 543 (851)
. ++|+.|++++|++.+.-+... .........+......||+|
T Consensus 586 ~--~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~C~ 630 (636)
T 4eco_A 586 T--PNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQDIRGCD 630 (636)
T ss_dssp C--TTCCEEECCSCTTCEEECTTTHHHHHTTCCEEECCTTSEEESCG
T ss_pred h--CcCCEEECcCCCCccccHHhcchhhhcccceeecCCccccCCCc
Confidence 5 788888888888876443221 11222233344444555655
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.4e-50 Score=465.80 Aligned_cols=510 Identities=21% Similarity=0.231 Sum_probs=426.5
Q ss_pred CCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhcCCccccccccc
Q 046438 19 LQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLA 96 (851)
Q Consensus 19 L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~ 96 (851)
.+..+.++.+++ .+|..+. +++++|+|++|++++..+ +..+++|++|||++|+++ .+++..|+.+++|++|+|+
T Consensus 9 ~~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~L~ 84 (570)
T 2z63_A 9 NITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILT 84 (570)
T ss_dssp TTEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCC-EECTTTTTTCTTCCEEECT
T ss_pred CcEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCC-ccCcccccCchhCCEEeCc
Confidence 466788888887 6776553 579999999999997654 789999999999999998 6777779999999999999
Q ss_pred ccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCC-CCccccCCCcCcEEEeeccccccc
Q 046438 97 FNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGV-VPATLFNISTLKILQLTNNTLSGS 175 (851)
Q Consensus 97 ~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~ 175 (851)
+|++++..|..|+++++|++|++++|.+++..+..|+++++|++|++++|.+.+. .|..+.++++|++|++++|++++
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~- 163 (570)
T 2z63_A 85 GNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS- 163 (570)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCE-
T ss_pred CCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccce-
Confidence 9999988889999999999999999999866666799999999999999999874 68899999999999999999984
Q ss_pred cchhHhhhcccc----cccccccccccccCCccccccCCCcEEecCCCCCcc-ccCccccCCCCcceEeccCccccCCCC
Q 046438 176 ISSSIRLALPNL----ELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSG-FIPNRFHNMRNLKELNLEYNYITSSNH 250 (851)
Q Consensus 176 ~~~~~~~~l~~L----~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~ 250 (851)
++...+..+++| +.|++++|.+++..+..+... +|+.|++++|.... ..+..+.++++++.+.+..+.+.....
T Consensus 164 ~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~ 242 (570)
T 2z63_A 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN 242 (570)
T ss_dssp ECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSS
T ss_pred ecHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchh
Confidence 444445577888 889999999998877777655 79999998885432 334566777777777665443322110
Q ss_pred ----cchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCC
Q 046438 251 ----ELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNG 326 (851)
Q Consensus 251 ----~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~ 326 (851)
....+..+..+ .++.++++++.-.....|..+..+. +|+.|++++|++. .+|..+..+ +|+.|++++|.+.
T Consensus 243 l~~~~~~~~~~l~~l-~l~~l~l~~~~~~~~~~~~~~~~l~-~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~- 317 (570)
T 2z63_A 243 LEKFDKSALEGLCNL-TIEEFRLAYLDYYLDDIIDLFNCLT-NVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG- 317 (570)
T ss_dssp CEECCTTTTGGGGGS-EEEEEEEEETTEEESCSTTTTGGGT-TCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-
T ss_pred hhhcchhhhcccccc-chhhhhhhcchhhhhhchhhhcCcC-cccEEEecCccch-hhhhhhccC-CccEEeeccCccc-
Confidence 00111222222 3677888877333345666666654 8999999999998 688889888 9999999999998
Q ss_pred CcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCC--CccccCCccccceecccCcCccCchhhc
Q 046438 327 SIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSI--PACFGNLASLRKLSFASNELTFVPSTFW 404 (851)
Q Consensus 327 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~p~~~~ 404 (851)
.+|. ..+++|++|++++|.+.+..+. ..+++|+.|++++|++++.. +..+..+++|++|++++|+++.+|..+.
T Consensus 318 ~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 393 (570)
T 2z63_A 318 QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFL 393 (570)
T ss_dssp SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEE
T ss_pred ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccccc
Confidence 4554 4789999999999999876554 78999999999999998654 6788999999999999999999988899
Q ss_pred ccCcceEEEecCCCCCCCCc-cccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccC-CCCcccccCCCCCC
Q 046438 405 NLTNILMVDLSSNPLSGSLP-LEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQ-GSIPNSIGDLISLE 482 (851)
Q Consensus 405 ~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~ 482 (851)
.+++|+.|++++|.+.+..| ..+..+++|++|++++|++++..|..|.++++|+.|++++|+++ +.+|..+..+++|+
T Consensus 394 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~ 473 (570)
T 2z63_A 394 GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLT 473 (570)
T ss_dssp TCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCC
T ss_pred ccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCC
Confidence 99999999999999997766 57899999999999999999889999999999999999999997 57899999999999
Q ss_pred EEECCCCcccccCCccccccccccceeccCccccccCCCC-CcccccCcccccCCcCccCCC
Q 046438 483 CLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRG-GTLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 483 ~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~-~~~~~l~~~~~~~n~~~c~~~ 543 (851)
+|+|++|++++..|..+..+++|+.|++++|++++.+|.. ..+..+..+.+.+|++.|.+|
T Consensus 474 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 474 FLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 9999999999988999999999999999999999987754 567889999999999999877
No 15
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3e-50 Score=463.09 Aligned_cols=459 Identities=20% Similarity=0.227 Sum_probs=329.4
Q ss_pred CCCcEEeCCCCCCCCCCCcchhcCCcccccccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEE
Q 046438 63 SSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALG 142 (851)
Q Consensus 63 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 142 (851)
++|++|||++|+++ .+++..|..+++|++|+|++|+|++..|+.|+++++|++|+|++|+++ .+|.. .+++|++|+
T Consensus 21 ~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 96 (520)
T 2z7x_B 21 QKTTILNISQNYIS-ELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLD 96 (520)
T ss_dssp TTCSEEECCSSCCC-CCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEE
T ss_pred ccccEEECCCCccc-ccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEe
Confidence 44444444444444 344344555555555555555555555556666666666666666665 34433 566666666
Q ss_pred ccCccccCC-CCccccCCCcCcEEEeeccccccccchhHhhhcccc--cccccccccc--cccCCccccccC-CCcEEec
Q 046438 143 LLSNNLVGV-VPATLFNISTLKILQLTNNTLSGSISSSIRLALPNL--ELFSLANNNF--SGKIPSFIFNAS-KLSICEL 216 (851)
Q Consensus 143 L~~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L--~~L~L~~N~i--~~~~~~~~~~~~-~L~~L~L 216 (851)
+++|++++. .|..|.++++|++|++++|.+++ ..+..+++| ++|++++|.+ ++..|..+..+. +...+++
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l 172 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK----SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVF 172 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG----GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEEC
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccch----hhccccccceeeEEEeecccccccccccccccccccceEEEEe
Confidence 666666552 45566666666666666666553 123345555 6666666666 555555555543 3345667
Q ss_pred CCCCCcccc-CccccCCCCcceEeccCcc-------ccCCCCcchhhhhccccccccEEeccCCCccCCCCCCcccc-cc
Q 046438 217 PDNSFSGFI-PNRFHNMRNLKELNLEYNY-------ITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGN-LS 287 (851)
Q Consensus 217 ~~n~l~~~~-~~~~~~l~~L~~L~L~~N~-------i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~-~~ 287 (851)
++|.+.+.. +..+..+++|+.|++++|. +. ..+..+..+++|+.|++++|.+....+...... ..
T Consensus 173 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~------~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~ 246 (520)
T 2z7x_B 173 PTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFL------SILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWH 246 (520)
T ss_dssp CSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHH------HHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHT
T ss_pred ccCcchhhhhhhhhhcccceeeccccccccccccceee------cchhhhccccchhhccccccccCHHHHHHHHHHhhh
Confidence 777765543 3467778888888888875 22 123457778888888888887653221111111 11
Q ss_pred ccccEEEeecCccccCCCccc-----ccccCCcEEEecCCCCCCCcC-ccccCC---CCCcEEEcccccccccccccccc
Q 046438 288 LSMERFYLHNCNIRGSIPKEM-----GNLINLIIIRLGYNKLNGSIP-STLSRL---EKLQILGLENNQLEGRILDDICR 358 (851)
Q Consensus 288 ~~L~~L~L~~n~i~~~~p~~l-----~~l~~L~~L~L~~n~l~~~~~-~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~ 358 (851)
.+|+.|++++|++++.+|..+ ..+++|+.+++++|.+ .+| ..+..+ ++|+.|++++|.+.+.. .+..
T Consensus 247 ~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~ 322 (520)
T 2z7x_B 247 TTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSK 322 (520)
T ss_dssp SSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSS
T ss_pred CcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhh
Confidence 379999999999999999998 9999999999999999 444 555554 78999999999987543 1268
Q ss_pred cCCCCEEEccCcccCCCCCccccCCccccceecccCcCcc---CchhhcccCcceEEEecCCCCCCCCcc-ccccchhhh
Q 046438 359 LARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTF---VPSTFWNLTNILMVDLSSNPLSGSLPL-EIGNLKVLV 434 (851)
Q Consensus 359 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~ 434 (851)
+++|++|++++|++++..|..+..+++|++|++++|+++. +|..+..+++|++|++++|++++.+|. .+..+++|+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 8999999999999999899999999999999999999995 456789999999999999999985665 488999999
Q ss_pred hhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCcc-ccccccccceeccCc
Q 046438 435 ELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSS-LEKLLYLKYLNVSFN 513 (851)
Q Consensus 435 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~l~l~~N 513 (851)
+|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|++++ +|.. +..+++|+.|++++|
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N 478 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTN 478 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSS
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCC
Confidence 999999999988887765 79999999999999 888888899999999999999995 5554 999999999999999
Q ss_pred cccccCCCCCc-ccccCccc-ccCCcCccCCC
Q 046438 514 RLEGEIPRGGT-LANFTSES-FMGNDLLCGSP 543 (851)
Q Consensus 514 ~l~~~~p~~~~-~~~l~~~~-~~~n~~~c~~~ 543 (851)
+|+|+|+.... ..++.... .......|+.|
T Consensus 479 ~~~c~c~~~~~~~~~~~~~~~~~~~~~~C~~p 510 (520)
T 2z7x_B 479 PWDCSCPRIDYLSRWLNKNSQKEQGSAKCSGS 510 (520)
T ss_dssp CBCCCHHHHHHHHHHHHHTTTTEESCCBBTTT
T ss_pred CCcccCCchHHHHHHHHhccccCCCCCCcCCc
Confidence 99999985433 12222111 13344577766
No 16
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.9e-49 Score=458.36 Aligned_cols=484 Identities=20% Similarity=0.232 Sum_probs=327.2
Q ss_pred CCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhcCCccccccc
Q 046438 17 SSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLS 94 (851)
Q Consensus 17 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 94 (851)
+.....|.++|+++ .+|..+. ++|++|+|++|++++..+ +..+++|++|++++|+++ .+++..|..+++|++|+
T Consensus 5 ~~~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 5 DASGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRIN-TIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp CTTSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEE
T ss_pred CCCceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcC-ccChhhccccccCCEEE
Confidence 34445677777777 5665443 677777777777776543 566666666666666666 44444456666666666
Q ss_pred ccccccccCCCccccCCCCccEEecccccccc-ccchhhcCcccccEEEccCccc-cCCCCccccCCCcCcEEEeecccc
Q 046438 95 LAFNQFAGHLPREIGNLTSLTSIDLSENHLMG-EIPHEIGNLRNLQALGLLSNNL-VGVVPATLFNISTLKILQLTNNTL 172 (851)
Q Consensus 95 L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l-~~~~~~~l~~l~~L~~L~L~~n~l 172 (851)
|++|++++..|..|+++++|++|+|++|.+++ ..|..|+++++|++|++++|++ ....+..+.++++|++|++++|.+
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 66666665555556666666666666666654 2345566666666666666652 323334555666666666666666
Q ss_pred ccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCcccc---CccccCCCCcceEeccCccccCCC
Q 046438 173 SGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFI---PNRFHNMRNLKELNLEYNYITSSN 249 (851)
Q Consensus 173 ~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~---~~~~~~l~~L~~L~L~~N~i~~~~ 249 (851)
++..+..+ ..+++|++|+++.|.+.......+..+++|+.|++++|++++.. ......+++|+.|++++|.+++..
T Consensus 161 ~~~~~~~l-~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 239 (549)
T 2z81_A 161 RNYQSQSL-KSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDES 239 (549)
T ss_dssp CEECTTTT-TTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHH
T ss_pred cccChhhh-hccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhH
Confidence 54444332 24555555665555554322222234555555555555555431 112223445555555555544311
Q ss_pred CcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccC------CCcccccccCCcEEEecCCC
Q 046438 250 HELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGS------IPKEMGNLINLIIIRLGYNK 323 (851)
Q Consensus 250 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~------~p~~l~~l~~L~~L~L~~n~ 323 (851)
.. .....+..+++ ++.+++++|.+.+. ....+..+.+|+.|++.++.
T Consensus 240 ~~-~l~~~~~~~~~--------------------------L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~ 292 (549)
T 2z81_A 240 FN-ELLKLLRYILE--------------------------LSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLH 292 (549)
T ss_dssp HH-HHHGGGGGCTT--------------------------CCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCB
T ss_pred HH-HHHHHhhhhcc--------------------------ccccccccccccccccccccchhhhhhhcccccccccccc
Confidence 10 11112233344 45555555554432 12345667888899998887
Q ss_pred CCCC-----cCccccCCCCCcEEEcccccccccccccc-cccCCCCEEEccCcccCCCCC---ccccCCccccceecccC
Q 046438 324 LNGS-----IPSTLSRLEKLQILGLENNQLEGRILDDI-CRLARLSSVYLDHNKLSGSIP---ACFGNLASLRKLSFASN 394 (851)
Q Consensus 324 l~~~-----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~N 394 (851)
+... .+..+...++|++|++++|.++. +|..+ ..+++|+.|++++|++.+..| ..++.+++|++|++++|
T Consensus 293 i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~-ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N 371 (549)
T 2z81_A 293 IPQFYLFYDLSTVYSLLEKVKRITVENSKVFL-VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQN 371 (549)
T ss_dssp CSCGGGSCCCCHHHHHSTTCCEEEEESSCCCC-CCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTS
T ss_pred cchhhhcccchhhhhhcccceEEEeccCcccc-CCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCC
Confidence 7532 12223446789999999999985 45444 689999999999999987654 34788999999999999
Q ss_pred cCccCc---hhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCC
Q 046438 395 ELTFVP---STFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSI 471 (851)
Q Consensus 395 ~l~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 471 (851)
+++.++ ..+..+++|++|++++|+++ .+|..+..+++|++|++++|+++ .+|..+. ++|++|+|++|+|++.+
T Consensus 372 ~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~ 447 (549)
T 2z81_A 372 HLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS 447 (549)
T ss_dssp CCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC
T ss_pred cccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc
Confidence 999886 35889999999999999999 78889999999999999999998 4555442 68999999999999643
Q ss_pred cccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCC-CCcccccCcccccCCcCccCCC
Q 046438 472 PNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPR-GGTLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 472 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~-~~~~~~l~~~~~~~n~~~c~~~ 543 (851)
..+++|++|+|++|+|+ .+|. ...+++|+.|+|++|++++.+|. ...+..+..+.+.+|++.|++|
T Consensus 448 ----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 448 ----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp ----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred ----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 57899999999999999 6776 56899999999999999998876 3567888999999999999876
No 17
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.9e-48 Score=458.75 Aligned_cols=516 Identities=22% Similarity=0.231 Sum_probs=392.2
Q ss_pred ccCCCCCCCCCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhc
Q 046438 8 TVPSQLGSLSSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFS 85 (851)
Q Consensus 8 ~~p~~l~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 85 (851)
++|+.+- +++++|||++|+|+++.|.+|.++++|++|+|++|+|+++.+ |..+++|++|+|++|+|+ .+|...|.
T Consensus 45 ~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~f~ 121 (635)
T 4g8a_A 45 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFS 121 (635)
T ss_dssp SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECGGGGT
T ss_pred ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC-CCCHHHhc
Confidence 4676663 478999999999987777889999999999999999987665 788999999999999998 78888889
Q ss_pred CCcccccccccccccccCCCccccCCCCccEEecccccccc-ccchhhcCcccccEEEccCccccCCCCccccCCCcC--
Q 046438 86 YLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMG-EIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTL-- 162 (851)
Q Consensus 86 ~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L-- 162 (851)
++++|++|+|++|++++..+..|+++++|++|+|++|.+++ ..|..++.+++|++|++++|++++..+..+..+.++
T Consensus 122 ~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~ 201 (635)
T 4g8a_A 122 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL 201 (635)
T ss_dssp TCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTT
T ss_pred CCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhh
Confidence 99999999999999988777788999999999999999875 357888889999999999999988877777655443
Q ss_pred --cEEEeeccccccccchhHhhhcccccccccccccccc-cCCccccccCCCcEE-------------------------
Q 046438 163 --KILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSG-KIPSFIFNASKLSIC------------------------- 214 (851)
Q Consensus 163 --~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~~~~L~~L------------------------- 214 (851)
..++++.|.++ .++...+ ....++.+++.+|.... ..+..+..+..++..
T Consensus 202 ~~~~~~ls~n~l~-~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 279 (635)
T 4g8a_A 202 LNLSLDLSLNPMN-FIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLC 279 (635)
T ss_dssp CCCEEECTTCCCC-EECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGG
T ss_pred hhhhhhcccCccc-ccCcccc-cchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccccccccccc
Confidence 36777777776 3333333 23345556666554331 112222333333332
Q ss_pred -----ecCCCCCc---cccCccccCCCCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccc
Q 046438 215 -----ELPDNSFS---GFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNL 286 (851)
Q Consensus 215 -----~L~~n~l~---~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~ 286 (851)
.+..+... ......+..+.+++.+++.+|.+... ..+.....|+.|++++|.+.... . ..
T Consensus 280 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-------~~~~~~~~L~~L~l~~~~~~~~~--~---~~ 347 (635)
T 4g8a_A 280 NLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV-------KDFSYNFGWQHLELVNCKFGQFP--T---LK 347 (635)
T ss_dssp GSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC-------GGGGSCCCCSEEEEESCEESSCC--C---CB
T ss_pred chhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc-------cccccchhhhhhhcccccccCcC--c---cc
Confidence 22222111 11223445566777777777766643 23455677888888888774322 1 12
Q ss_pred cccccEEEeecCccccCCCcccccccCCcEEEecCCCCCC--CcCccccCCCCCcEEEcccccccccccccccccCCCCE
Q 046438 287 SLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNG--SIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSS 364 (851)
Q Consensus 287 ~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 364 (851)
...++.+++.+|.+... .....+++|+.|++++|.+.. ..+..+..+.+|+.|+++.|.+.. .+..+..+++|+.
T Consensus 348 l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~ 424 (635)
T 4g8a_A 348 LKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEH 424 (635)
T ss_dssp CTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCE
T ss_pred chhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccc
Confidence 23678888888887643 345678999999999998853 345567788899999999998874 4567788999999
Q ss_pred EEccCcccCCCC-CccccCCccccceecccCcCccC-chhhcccCcceEEEecCCCCC-CCCccccccchhhhhhhccCC
Q 046438 365 VYLDHNKLSGSI-PACFGNLASLRKLSFASNELTFV-PSTFWNLTNILMVDLSSNPLS-GSLPLEIGNLKVLVELYLSRN 441 (851)
Q Consensus 365 L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~-p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N 441 (851)
++++.|...... +..|..+++++.++++.|.+..+ +..+..+++|+.|+|++|.+. +..|..|..+++|++|+|++|
T Consensus 425 l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N 504 (635)
T 4g8a_A 425 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 504 (635)
T ss_dssp EECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred hhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCC
Confidence 999988776544 45788899999999999999865 556788999999999999854 457889999999999999999
Q ss_pred cccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCcccccc-ccccceeccCccccccCC
Q 046438 442 NLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKL-LYLKYLNVSFNRLEGEIP 520 (851)
Q Consensus 442 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~l~l~~N~l~~~~p 520 (851)
+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|||++|+|++..|..+..+ ++|+.|+|++|||+|+|.
T Consensus 505 ~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 505 QLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred ccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9998889999999999999999999998889999999999999999999999999999988 689999999999999997
Q ss_pred CCCcccccCcc---cccCCcCccCCC
Q 046438 521 RGGTLANFTSE---SFMGNDLLCGSP 543 (851)
Q Consensus 521 ~~~~~~~l~~~---~~~~n~~~c~~~ 543 (851)
..+...++... ........|..|
T Consensus 585 ~~~~~~wl~~~~~~~~~~~~~~C~~P 610 (635)
T 4g8a_A 585 HQSFLQWIKDQRQLLVEVERMECATP 610 (635)
T ss_dssp GHHHHHHHHHTTTTBSCGGGCBBCSS
T ss_pred cHHHHHHHHhCCCccCCCCCceeCCc
Confidence 54333333221 122334578877
No 18
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.1e-48 Score=460.76 Aligned_cols=459 Identities=19% Similarity=0.251 Sum_probs=306.4
Q ss_pred CCCCEEeCcCCCCccCCCccccCCCCCCEEEc-CCCcccccccCCCCCCCcEEeCCC--------------------CCC
Q 046438 17 SSLQYLDLSFNQLLGTIPSSIFSINTLEILDL-SNNQLSGSFPFFNMSSLQVIDLSD--------------------NRL 75 (851)
Q Consensus 17 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L-s~n~l~~~~~~~~~~~L~~L~Ls~--------------------n~l 75 (851)
.+++.|+|++|+++|.+|.+++.+++|++|+| ++|.+.|..++..... .++++. ..+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~--~~~l~~~~l~~lr~~~~~~~l~~~~~~~~ 400 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEEL--TPDMSEERKHRIRMHYKKMFLDYDQRLNL 400 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCC--CSSCCHHHHHHHHTHHHHHHTCCCGGGGS
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeeccccccccccccccccc--ccccchhHHHHHHHhhhhhhhccCcchhh
Confidence 47999999999999999999999999999999 9999988755542211 000000 000
Q ss_pred CC----------CCCcchhcCCcccccccccc--cccccCCCccccCCCCccEEecccccccc-----------------
Q 046438 76 SG----------ELPANIFSYLPFVQFLSLAF--NQFAGHLPREIGNLTSLTSIDLSENHLMG----------------- 126 (851)
Q Consensus 76 ~~----------~~~~~~~~~l~~L~~L~L~~--N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~----------------- 126 (851)
++ ............++.+.+.. |.+++ +|..|+++++|++|+|++|.+++
T Consensus 401 s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g 479 (876)
T 4ecn_A 401 SDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQ 479 (876)
T ss_dssp CHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHH
T ss_pred hHHHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccc
Confidence 00 00000012334555566654 88887 78889999999999999999987
Q ss_pred ccchhhc--CcccccEEEccCccccCCCCccccCCCcCcEEEeeccc-ccc-ccchhHhhhc-------ccccccccccc
Q 046438 127 EIPHEIG--NLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNT-LSG-SISSSIRLAL-------PNLELFSLANN 195 (851)
Q Consensus 127 ~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~-l~~-~~~~~~~~~l-------~~L~~L~L~~N 195 (851)
.+|..++ ++++|++|+|++|++.+.+|..|.++++|+.|+|++|+ +++ .+|..+. .+ ++|++|+|++|
T Consensus 480 ~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~-~L~~~~~~l~~L~~L~Ls~N 558 (876)
T 4ecn_A 480 YENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWT-RLADDEDTGPKIQIFYMGYN 558 (876)
T ss_dssp HTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHH-HHHHCTTTTTTCCEEECCSS
T ss_pred cCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHH-hhhhcccccCCccEEEeeCC
Confidence 3788877 88899999998888888888888888899999999887 876 6666553 34 37777777777
Q ss_pred cccccCCc--cccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCCcchhhhhcccccc-ccEEeccCC
Q 046438 196 NFSGKIPS--FIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKK-LKVLSLTGN 272 (851)
Q Consensus 196 ~i~~~~~~--~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~-L~~L~Ls~N 272 (851)
+++ .+|. .+.++++|+.|+|++|.++ .+| .|+.+++|++|+|++|+++.++ ..+..+++ |+.|++++|
T Consensus 559 ~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~lp------~~l~~l~~~L~~L~Ls~N 629 (876)
T 4ecn_A 559 NLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIP------EDFCAFTDQVEGLGFSHN 629 (876)
T ss_dssp CCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSCCC------TTSCEECTTCCEEECCSS
T ss_pred cCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccccch------HHHhhccccCCEEECcCC
Confidence 777 5666 6777777777777777777 344 6777777777777777766433 23455555 666666666
Q ss_pred CccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccc---c--CCCCCcEEEccccc
Q 046438 273 PLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTL---S--RLEKLQILGLENNQ 347 (851)
Q Consensus 273 ~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~---~--~l~~L~~L~L~~n~ 347 (851)
++. .+|..+.... .++|+.|++++|.+.+.+|... . .+++|+.|+|++|.
T Consensus 630 ~L~--~lp~~~~~~~-----------------------~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~ 684 (876)
T 4ecn_A 630 KLK--YIPNIFNAKS-----------------------VYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNE 684 (876)
T ss_dssp CCC--SCCSCCCTTC-----------------------SSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSC
T ss_pred CCC--cCchhhhccc-----------------------cCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCc
Confidence 654 3444333322 1125555555555544333211 1 22355555555555
Q ss_pred ccccccccccccCCCCEEEccCcccCCCCCccccC-------CccccceecccCcCccCchhhc--ccCcceEEEecCCC
Q 046438 348 LEGRILDDICRLARLSSVYLDHNKLSGSIPACFGN-------LASLRKLSFASNELTFVPSTFW--NLTNILMVDLSSNP 418 (851)
Q Consensus 348 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-------l~~L~~L~L~~N~l~~~p~~~~--~l~~L~~L~Ls~N~ 418 (851)
++......+..+++|+.|+|++|++....+..+.. +++|+.|+|++|+++.+|..+. .+++|+.|+|++|+
T Consensus 685 L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~lp~~l~~~~l~~L~~L~Ls~N~ 764 (876)
T 4ecn_A 685 IQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNC 764 (876)
T ss_dssp CCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCCCCCGGGSTTTCTTCCEEECCSSC
T ss_pred CCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCccchHHhhhccCCCcCEEEeCCCC
Confidence 55333333335555666666666555222222221 2266666666666666666665 66666666666666
Q ss_pred CCCCCccccccchhhhhhhccC------CcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCccc
Q 046438 419 LSGSLPLEIGNLKVLVELYLSR------NNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILS 492 (851)
Q Consensus 419 l~~~~p~~~~~l~~L~~L~L~~------N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 492 (851)
+++ +|..+..+++|+.|+|++ |++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++|+.|||++|++.
T Consensus 765 L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~ 840 (876)
T 4ecn_A 765 FSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNI 840 (876)
T ss_dssp CSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTC
T ss_pred CCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCC
Confidence 664 566666666666666654 778888888888888888999998888 57887765 58888899888888
Q ss_pred ccCCccccccccccceeccCccccc
Q 046438 493 GIIPSSLEKLLYLKYLNVSFNRLEG 517 (851)
Q Consensus 493 ~~~p~~l~~l~~L~~l~l~~N~l~~ 517 (851)
...+..+.....+..+.|++|++..
T Consensus 841 ~i~~~~~~~~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 841 SIDVTSVCPYIEAGMYVLLYDKTQD 865 (876)
T ss_dssp EEECGGGHHHHHTTCCEEECCTTSE
T ss_pred ccChHHccccccchheeecCCCccc
Confidence 7777777777777888888887764
No 19
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.6e-49 Score=465.50 Aligned_cols=434 Identities=18% Similarity=0.233 Sum_probs=338.7
Q ss_pred CCcccccCCCCCCCCCCCEEeCcCCCCc------c------CCCccccCCCCCCEEEcCCCccccccc--CC--------
Q 046438 3 SFLTGTVPSQLGSLSSLQYLDLSFNQLL------G------TIPSSIFSINTLEILDLSNNQLSGSFP--FF-------- 60 (851)
Q Consensus 3 ~~~~~~~p~~l~~l~~L~~L~ls~n~l~------~------~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~-------- 60 (851)
+.++|.+|+++++|++|++|+|++|.+. + .+|... +..|+ +++++|.+.+.++ +.
T Consensus 91 ~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~ 167 (636)
T 4eco_A 91 FGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCIN 167 (636)
T ss_dssp SCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHH
T ss_pred cccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhh
Confidence 5689999999999999999999999772 2 233322 44555 6666666654333 11
Q ss_pred -----------CCCCCcEEeCC--CCCCCCCCCcchhcCCcccccccccccccccC-----------------CCcccc-
Q 046438 61 -----------NMSSLQVIDLS--DNRLSGELPANIFSYLPFVQFLSLAFNQFAGH-----------------LPREIG- 109 (851)
Q Consensus 61 -----------~~~~L~~L~Ls--~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~-----------------~~~~l~- 109 (851)
....++.+.+. .|++++ +|.. |+.+++|++|+|++|.+++. +|..++
T Consensus 168 ~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~ 245 (636)
T 4eco_A 168 SDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKA-VMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKW 245 (636)
T ss_dssp HCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGG-GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCG
T ss_pred cCccccccccccccchhhhhhccccCCCcc-CCHH-HhcccCCCEEECcCCccccccccccccccccchhcccCchhhhh
Confidence 11223333333 578886 7775 78899999999999999875 888888
Q ss_pred -CCCCccEEeccccccccccchhhcCcccccEEEccCcc-ccC-CCCccccCC------CcCcEEEeeccccccccch-h
Q 046438 110 -NLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNN-LVG-VVPATLFNI------STLKILQLTNNTLSGSISS-S 179 (851)
Q Consensus 110 -~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~l~~l------~~L~~L~L~~n~l~~~~~~-~ 179 (851)
++++|++|+|++|.+.+.+|..|+++++|++|++++|+ +++ .+|..+..+ ++|++|++++|+++ .+|. .
T Consensus 246 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~ 324 (636)
T 4eco_A 246 DNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVET 324 (636)
T ss_dssp GGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHH
T ss_pred cccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchh
Confidence 99999999999999988899999999999999999998 887 778777766 89999999999998 7776 3
Q ss_pred HhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCC-cceEeccCccccCCCCcchhhhhc
Q 046438 180 IRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRN-LKELNLEYNYITSSNHELSFISSL 258 (851)
Q Consensus 180 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~L~~N~i~~~~~~~~~~~~l 258 (851)
.+..+++|++|++++|++++.+| .+.++++|+.|+|++|.++ ..|..|.++++ |++|++++|+++.++.. +
T Consensus 325 ~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~------~ 396 (636)
T 4eco_A 325 SLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIPNI------F 396 (636)
T ss_dssp HHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCCSC------C
T ss_pred hhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcccchh------h
Confidence 45688999999999999998888 8888999999999999999 56777999999 99999999998865432 1
Q ss_pred cccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccc-------cccCCcEEEecCCCCCCCcCcc
Q 046438 259 ANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMG-------NLINLIIIRLGYNKLNGSIPST 331 (851)
Q Consensus 259 ~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~-------~l~~L~~L~L~~n~l~~~~~~~ 331 (851)
..++ ..+|+.|++++|++++..|..+. .+++|++|++++|.++...+..
T Consensus 397 ~~~~------------------------l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~ 452 (636)
T 4eco_A 397 DAKS------------------------VSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKEL 452 (636)
T ss_dssp CTTC------------------------SSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHH
T ss_pred hhcc------------------------cCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHH
Confidence 1111 01345555555556666677776 7889999999999999665556
Q ss_pred ccCCCCCcEEEcccccccccccccccccC-------CCCEEEccCcccCCCCCcccc--CCccccceecccCcCccCchh
Q 046438 332 LSRLEKLQILGLENNQLEGRILDDICRLA-------RLSSVYLDHNKLSGSIPACFG--NLASLRKLSFASNELTFVPST 402 (851)
Q Consensus 332 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-------~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~p~~ 402 (851)
+..+++|++|+|++|.++...+..+.... +|+.|+|++|+++ .+|..+. .+++|++|+|++|+++.+|..
T Consensus 453 ~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~ 531 (636)
T 4eco_A 453 FSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKFPTQ 531 (636)
T ss_dssp HHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSCCCG
T ss_pred HccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCcChh
Confidence 77899999999999999954444444332 7888888888887 5666665 778888888888888888877
Q ss_pred hcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCC
Q 046438 403 FWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLE 482 (851)
Q Consensus 403 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 482 (851)
+..+++|+.|+|++|+ ++++|++.+.+|..++.+++|+.|+|++|++ +.+|..+. ++|+
T Consensus 532 ~~~l~~L~~L~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~ 590 (636)
T 4eco_A 532 PLNSSTLKGFGIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNIS 590 (636)
T ss_dssp GGGCSSCCEEECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCC
T ss_pred hhcCCCCCEEECCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCC
Confidence 8888888888887775 5678899889999999999999999999999 47888766 7999
Q ss_pred EEECCCCcccccCC
Q 046438 483 CLDLSNNILSGIIP 496 (851)
Q Consensus 483 ~L~Ls~N~l~~~~p 496 (851)
.|||++|++....+
T Consensus 591 ~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 591 VLDIKDNPNISIDL 604 (636)
T ss_dssp EEECCSCTTCEEEC
T ss_pred EEECcCCCCccccH
Confidence 99999998875443
No 20
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.9e-47 Score=438.19 Aligned_cols=443 Identities=21% Similarity=0.268 Sum_probs=286.4
Q ss_pred ccCCCCCCCCCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhc
Q 046438 8 TVPSQLGSLSSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFS 85 (851)
Q Consensus 8 ~~p~~l~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 85 (851)
.+|..+. ++|++|+|++|++++..|.++..+++|++|+|++|++++..| +..+++|++|||++|+++ .+|..
T Consensus 14 ~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--- 87 (520)
T 2z7x_B 14 HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--- 87 (520)
T ss_dssp SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC---
T ss_pred ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc---
Confidence 3565554 566666666666665555566666666666666666665433 556666666666666665 45543
Q ss_pred CCccccccccccccccc-CCCccccCCCCccEEeccccccccccchhhcCcccc--cEEEccCccc--cCCCCccccCCC
Q 046438 86 YLPFVQFLSLAFNQFAG-HLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNL--QALGLLSNNL--VGVVPATLFNIS 160 (851)
Q Consensus 86 ~l~~L~~L~L~~N~i~~-~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L--~~L~L~~n~l--~~~~~~~l~~l~ 160 (851)
.+++|++|+|++|.+++ .+|..|+++++|++|+|++|.+++ ..+..+++| ++|++++|++ .+..|..+..+.
T Consensus 88 ~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~ 164 (520)
T 2z7x_B 88 PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFN 164 (520)
T ss_dssp CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCC
T ss_pred ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccc
Confidence 46666666666666654 345566666666666666666553 334555555 6666666666 555555555444
Q ss_pred -cCcEEEeeccccccccchhHhhhccccccccccccc-------ccccCCccccccCCCcEEecCCCCCccccCccccCC
Q 046438 161 -TLKILQLTNNTLSGSISSSIRLALPNLELFSLANNN-------FSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNM 232 (851)
Q Consensus 161 -~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~-------i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l 232 (851)
+...+++++|.+.+.++...+..+++|+.|++++|. +.+.++ .|+.+
T Consensus 165 ~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-------------------------~l~~l 219 (520)
T 2z7x_B 165 TESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-------------------------KLQTN 219 (520)
T ss_dssp EEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-------------------------GGGGC
T ss_pred cceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-------------------------hhccc
Confidence 233445555555555555555555566666666554 333333 34444
Q ss_pred CCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCcc-----ccccccccEEEeecCccccCCC-c
Q 046438 233 RNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSI-----GNLSLSMERFYLHNCNIRGSIP-K 306 (851)
Q Consensus 233 ~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~-----~~~~~~L~~L~L~~n~i~~~~p-~ 306 (851)
++|+.|++++|.++..... ... .....++|++|++++|++. ..+|..+ ..+. .|+.+++++|.+ .+| .
T Consensus 220 ~~L~~L~l~~~~l~~~~~~-~~~-~~~~~~~L~~L~l~~n~l~-~~~p~~~~~~~~~~l~-~L~~l~l~~n~~--~~p~~ 293 (520)
T 2z7x_B 220 PKLSNLTLNNIETTWNSFI-RIL-QLVWHTTVWYFSISNVKLQ-GQLDFRDFDYSGTSLK-ALSIHQVVSDVF--GFPQS 293 (520)
T ss_dssp TTCCEEEEEEEEEEHHHHH-HHH-HHHHTSSCSEEEEEEEEEE-SCCCCCCCCCCSCCCC-EEEEEEEEECCC--CSCTH
T ss_pred cchhhccccccccCHHHHH-HHH-HHhhhCcccEEEeeccccc-CccccchhhcccccCc-eeEeccccccce--ecchh
Confidence 5555555555444321100 000 0011235555555555543 2344444 3332 566666666666 334 4
Q ss_pred ccccc---cCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCC--CCCcccc
Q 046438 307 EMGNL---INLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSG--SIPACFG 381 (851)
Q Consensus 307 ~l~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~ 381 (851)
.+..+ .+|+.|++++|.+.... .+..+++|++|++++|.+++..|..+..+++|+.|++++|++.+ .+|..+.
T Consensus 294 ~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~ 371 (520)
T 2z7x_B 294 YIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTT 371 (520)
T ss_dssp HHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHT
T ss_pred hhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHh
Confidence 45444 56788888888775332 12567788888888888887777788888888888888888875 4456788
Q ss_pred CCccccceecccCcCcc-Cchh-hcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccE
Q 046438 382 NLASLRKLSFASNELTF-VPST-FWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQN 459 (851)
Q Consensus 382 ~l~~L~~L~L~~N~l~~-~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 459 (851)
.+++|++|++++|+++. +|.. +..+++|+.|++++|++++..|..+. ++|+.|++++|+|+ .+|..+..+++|+.
T Consensus 372 ~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~ 448 (520)
T 2z7x_B 372 QMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQE 448 (520)
T ss_dssp TCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCE
T ss_pred hCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCE
Confidence 88888888888888886 7764 77788999999999999877777664 78999999999999 78888889999999
Q ss_pred EEccCcccCCCCccc-ccCCCCCCEEECCCCcccccCC
Q 046438 460 LSLGDNNLQGSIPNS-IGDLISLECLDLSNNILSGIIP 496 (851)
Q Consensus 460 L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p 496 (851)
|+|++|+|+ .+|.. +..+++|++|+|++|++++..+
T Consensus 449 L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 449 LNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp EECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred EECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 999999999 56654 8999999999999999997544
No 21
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=8.4e-47 Score=437.92 Aligned_cols=463 Identities=19% Similarity=0.197 Sum_probs=345.3
Q ss_pred CCCEEEcCCCcccccccCCCCCCCcEEeCCCCCCCCCCCcchhcCCcccccccccccccccCCCccccCCCCccEEeccc
Q 046438 42 TLEILDLSNNQLSGSFPFFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSE 121 (851)
Q Consensus 42 ~L~~L~Ls~n~l~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~ 121 (851)
..+++++++|++++ +|..-.++|++||+++|.++ .+++..|..+++|++|+|++|+|++..|+.|.++++|++|+|++
T Consensus 32 ~~~~l~ls~~~L~~-ip~~~~~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 32 LESMVDYSNRNLTH-VPKDLPPRTKALSLSQNSIS-ELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp -CCEEECTTSCCCS-CCTTSCTTCCEEECCSSCCC-CCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCcEEEcCCCCCcc-CCCCCCCCcCEEECCCCCcc-ccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 33666666666664 33223366777777777776 55555567777777777777777766677777777777777777
Q ss_pred cccccccchhhcCcccccEEEccCccccCC-CCccccCCCcCcEEEeeccccccccchhHhhhcccc--cccccccccc-
Q 046438 122 NHLMGEIPHEIGNLRNLQALGLLSNNLVGV-VPATLFNISTLKILQLTNNTLSGSISSSIRLALPNL--ELFSLANNNF- 197 (851)
Q Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L--~~L~L~~N~i- 197 (851)
|.++ .+|.. .+++|++|++++|++.+. .|..|.++++|++|++++|++++. .+..+++| ++|++++|.+
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL----DLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT----TTGGGTTSCEEEEEEEESSCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC----chhhhhhceeeEEEeeccccc
Confidence 7776 45544 677777777777777653 346777777777777777777642 12344455 7777777777
Q ss_pred -cccCCccccccC-CCcEEecCCCCCccccC-ccccCCCCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCc
Q 046438 198 -SGKIPSFIFNAS-KLSICELPDNSFSGFIP-NRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPL 274 (851)
Q Consensus 198 -~~~~~~~~~~~~-~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 274 (851)
++..|..+..+. +...+++++|.+.+..+ ..+..+++|+.|++++|+.... .-...+..+..+++|+.++++++.+
T Consensus 183 ~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~-~l~~~~~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 183 IKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQ-RLMTFLSELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHH-HHHHHHHHHHSCSSCEEEEEEEEEE
T ss_pred ccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccc-hHHHHHHHHhccCcceEEEecCCcC
Confidence 666676666543 12245777887766444 3567788899999988852110 0012344577788888888888776
Q ss_pred cCCCC---CCccccccccccEEEeecCccccCCCccc-----ccccCCcEEEecCCCCCCCcC-ccccC---CCCCcEEE
Q 046438 275 LDCVL---PSSIGNLSLSMERFYLHNCNIRGSIPKEM-----GNLINLIIIRLGYNKLNGSIP-STLSR---LEKLQILG 342 (851)
Q Consensus 275 ~~~~~---p~~~~~~~~~L~~L~L~~n~i~~~~p~~l-----~~l~~L~~L~L~~n~l~~~~~-~~~~~---l~~L~~L~ 342 (851)
....+ +.... ..+|+.|++++|++++.+|..+ .+++.|+.++++.|.+ .+| ..+.. ..+|++|+
T Consensus 262 ~~~~~~~~~~~~~--~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~ 337 (562)
T 3a79_B 262 TWKCSVKLFQFFW--PRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLS 337 (562)
T ss_dssp CHHHHHHHHHHHT--TSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEE
T ss_pred cHHHHHHHHHhhh--cccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEE
Confidence 43221 11111 1379999999999998899888 7888888888888887 344 33333 36899999
Q ss_pred cccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccCc---hhhcccCcceEEEecCCCC
Q 046438 343 LENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVP---STFWNLTNILMVDLSSNPL 419 (851)
Q Consensus 343 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p---~~~~~l~~L~~L~Ls~N~l 419 (851)
+++|.+.... ....+++|+.|++++|++++..|..+..+++|++|++++|+++.++ ..+.++++|+.|++++|++
T Consensus 338 l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l 415 (562)
T 3a79_B 338 ISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSL 415 (562)
T ss_dssp EESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCC
T ss_pred ccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcC
Confidence 9999987432 1267899999999999999989999999999999999999999764 5688999999999999999
Q ss_pred CCCCcc-ccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCcc
Q 046438 420 SGSLPL-EIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSS 498 (851)
Q Consensus 420 ~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 498 (851)
++.+|. .+..+++|++|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++ +|..
T Consensus 416 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~ 491 (562)
T 3a79_B 416 NSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDG 491 (562)
T ss_dssp BSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTT
T ss_pred CCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHH
Confidence 984554 588999999999999999987777665 79999999999999 788888899999999999999995 5555
Q ss_pred -ccccccccceeccCccccccCCCCCc
Q 046438 499 -LEKLLYLKYLNVSFNRLEGEIPRGGT 524 (851)
Q Consensus 499 -l~~l~~L~~l~l~~N~l~~~~p~~~~ 524 (851)
+..+++|+.|++++|+|+|+||....
T Consensus 492 ~~~~l~~L~~L~l~~N~~~c~c~~~~~ 518 (562)
T 3a79_B 492 VFDRLTSLQYIWLHDNPWDCTCPGIRY 518 (562)
T ss_dssp STTTCTTCCCEECCSCCBCCCHHHHHH
T ss_pred HHhcCCCCCEEEecCCCcCCCcchHHH
Confidence 99999999999999999999986533
No 22
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.8e-47 Score=448.77 Aligned_cols=470 Identities=17% Similarity=0.172 Sum_probs=308.2
Q ss_pred CCCCEEEcCCCccccccc--CCCCCCCcEEeC-CCCCCCCCCCcchhcC---Ccccccccccc------------cccc-
Q 046438 41 NTLEILDLSNNQLSGSFP--FFNMSSLQVIDL-SDNRLSGELPANIFSY---LPFVQFLSLAF------------NQFA- 101 (851)
Q Consensus 41 ~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~L-s~n~l~~~~~~~~~~~---l~~L~~L~L~~------------N~i~- 101 (851)
.+++.|+|++|++.|.+| +..+++|++||| ++|.++|..|...... ++..+...+.. ..+.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 567777777777776554 677777777777 7777665433221110 00000000000 0000
Q ss_pred ----------cCCCccccCCCCccEEeccc--cccccccchhhcCcccccEEEccCccccCC-----------------C
Q 046438 102 ----------GHLPREIGNLTSLTSIDLSE--NHLMGEIPHEIGNLRNLQALGLLSNNLVGV-----------------V 152 (851)
Q Consensus 102 ----------~~~~~~l~~l~~L~~L~Ls~--n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-----------------~ 152 (851)
...+-.......++.+.+.. |.+++ +|..|+++++|++|+|++|++++. +
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 00000111222344444433 66665 677777777777777777777662 4
Q ss_pred Ccccc--CCCcCcEEEeeccccccccchhHhhhccccccccccccc-ccc-cCCccccccCCCcEEecCCCCCccccCcc
Q 046438 153 PATLF--NISTLKILQLTNNTLSGSISSSIRLALPNLELFSLANNN-FSG-KIPSFIFNASKLSICELPDNSFSGFIPNR 228 (851)
Q Consensus 153 ~~~l~--~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~-i~~-~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 228 (851)
|..+. ++++|+.|+|++|.+.+.+|..+ ..+++|++|+|++|+ +++ .+|..+.+++ ..
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l-~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~-----------------~~ 543 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFL-YDLPELQSLNIACNRGISAAQLKADWTRLA-----------------DD 543 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGG-GGCSSCCEEECTTCTTSCHHHHHHHHHHHH-----------------HC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHH-hCCCCCCEEECcCCCCcccccchHHHHhhh-----------------hc
Confidence 55544 56666666666665555555332 255555555555555 554 4454444333 01
Q ss_pred ccCCCCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCccc
Q 046438 229 FHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEM 308 (851)
Q Consensus 229 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l 308 (851)
+..+++|++|+|++|.++.++. ...+..+++|+.|++++|++. .+| .+..+. +|+.|++++|+++ .+|..+
T Consensus 544 ~~~l~~L~~L~Ls~N~L~~ip~----~~~l~~L~~L~~L~Ls~N~l~--~lp-~~~~L~-~L~~L~Ls~N~l~-~lp~~l 614 (876)
T 4ecn_A 544 EDTGPKIQIFYMGYNNLEEFPA----SASLQKMVKLGLLDCVHNKVR--HLE-AFGTNV-KLTDLKLDYNQIE-EIPEDF 614 (876)
T ss_dssp TTTTTTCCEEECCSSCCCBCCC----HHHHTTCTTCCEEECTTSCCC--BCC-CCCTTS-EESEEECCSSCCS-CCCTTS
T ss_pred ccccCCccEEEeeCCcCCccCC----hhhhhcCCCCCEEECCCCCcc--cch-hhcCCC-cceEEECcCCccc-cchHHH
Confidence 1112245555555554443221 012344445555555555543 333 333332 5666666666666 678889
Q ss_pred ccccC-CcEEEecCCCCCCCcCccccCCCC--CcEEEcccccccccccccc---c--ccCCCCEEEccCcccCCCCCccc
Q 046438 309 GNLIN-LIIIRLGYNKLNGSIPSTLSRLEK--LQILGLENNQLEGRILDDI---C--RLARLSSVYLDHNKLSGSIPACF 380 (851)
Q Consensus 309 ~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~--L~~L~L~~n~l~~~~~~~~---~--~l~~L~~L~L~~N~l~~~~~~~~ 380 (851)
..+++ |+.|++++|.++ .+|..+..++. |+.|++++|.+.+.+|... . .+++|+.|+|++|++....+..+
T Consensus 615 ~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~ 693 (876)
T 4ecn_A 615 CAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELF 693 (876)
T ss_dssp CEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHH
T ss_pred hhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHH
Confidence 99999 999999999998 77888877654 9999999999998665332 2 34589999999999995544555
Q ss_pred cCCccccceecccCcCccCchhhccc--------CcceEEEecCCCCCCCCccccc--cchhhhhhhccCCcccccCCcc
Q 046438 381 GNLASLRKLSFASNELTFVPSTFWNL--------TNILMVDLSSNPLSGSLPLEIG--NLKVLVELYLSRNNLSGDIPTT 450 (851)
Q Consensus 381 ~~l~~L~~L~L~~N~l~~~p~~~~~l--------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~~~~ 450 (851)
..+++|+.|+|++|+++.+|..+... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..
T Consensus 694 ~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~ 771 (876)
T 4ecn_A 694 ATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQ 771 (876)
T ss_dssp HTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCG
T ss_pred ccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchh
Confidence 68999999999999999998865543 39999999999999 7888887 99999999999999996 7999
Q ss_pred cCCCCCccEEEccC------cccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCCc
Q 046438 451 IGGLKNLQNLSLGD------NNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGT 524 (851)
Q Consensus 451 ~~~l~~L~~L~L~~------N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~ 524 (851)
+..+++|+.|+|++ |++.+.+|..+..+++|+.|+|++|+| +.+|..+. ++|+.|+|++|++....+..-.
T Consensus 772 l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~ 848 (876)
T 4ecn_A 772 PLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVC 848 (876)
T ss_dssp GGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGH
T ss_pred hhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHcc
Confidence 99999999999977 888899999999999999999999999 58888876 6999999999999765442211
Q ss_pred -ccccCcccccCCcC--ccCCCC
Q 046438 525 -LANFTSESFMGNDL--LCGSPH 544 (851)
Q Consensus 525 -~~~l~~~~~~~n~~--~c~~~~ 544 (851)
........+.+|+. .||||.
T Consensus 849 ~~~~~~~~~L~~n~~~~I~gC~~ 871 (876)
T 4ecn_A 849 PYIEAGMYVLLYDKTQDIRGCDA 871 (876)
T ss_dssp HHHHTTCCEEECCTTSEEESCGG
T ss_pred ccccchheeecCCCccccCCCCC
Confidence 11223334445544 346663
No 23
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.1e-45 Score=432.85 Aligned_cols=524 Identities=20% Similarity=0.228 Sum_probs=406.6
Q ss_pred CcccccCCCCCCCCC---CCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCC
Q 046438 4 FLTGTVPSQLGSLSS---LQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGE 78 (851)
Q Consensus 4 ~~~~~~p~~l~~l~~---L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~ 78 (851)
..+..+|++...|.. -...+-++-+++ .+|..+. +++++|||++|+|+++.+ |..+++|++|||++|+|+ .
T Consensus 15 ~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~-~ 90 (635)
T 4g8a_A 15 AANSSIPESWEPCVEVVPNITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-T 90 (635)
T ss_dssp ----------CCSEEEETTTEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC-E
T ss_pred cccCCCCCCCCCccccCCCCEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCC-C
Confidence 456677877665532 345577777888 6776553 589999999999998765 889999999999999998 7
Q ss_pred CCcchhcCCcccccccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCC-CCcccc
Q 046438 79 LPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGV-VPATLF 157 (851)
Q Consensus 79 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~l~ 157 (851)
+++..|+++++|++|+|++|+|++..++.|.++++|++|+|++|++++..+..|+++++|++|++++|++++. .|..+.
T Consensus 91 i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~ 170 (635)
T 4g8a_A 91 IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS 170 (635)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGG
T ss_pred cChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhc
Confidence 8888899999999999999999988888999999999999999999987778899999999999999999864 577888
Q ss_pred CCCcCcEEEeeccccccccchhHhhhccccc----ccccccccccccCCccccccCCCcEEecCCCCCcc-ccCccccCC
Q 046438 158 NISTLKILQLTNNTLSGSISSSIRLALPNLE----LFSLANNNFSGKIPSFIFNASKLSICELPDNSFSG-FIPNRFHNM 232 (851)
Q Consensus 158 ~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~----~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~~l 232 (851)
.+++|++|+|++|++++..+. .+..+.+++ .++++.|.++...+..+ ....+..+++.+|.... ..+..+..+
T Consensus 171 ~l~~L~~L~L~~N~l~~~~~~-~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l 248 (635)
T 4g8a_A 171 NLTNLEHLDLSSNKIQSIYCT-DLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGL 248 (635)
T ss_dssp GCTTCCEEECCSSCCCEECGG-GGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTT
T ss_pred cchhhhhhcccCccccccccc-cccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhhcCC
Confidence 999999999999999854444 444566554 57889999986555444 44567788888886652 334455666
Q ss_pred CCcceEeccCccccCCCC----------------------------cchhhhhccccccccEEeccCCCccCCCCCCccc
Q 046438 233 RNLKELNLEYNYITSSNH----------------------------ELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIG 284 (851)
Q Consensus 233 ~~L~~L~L~~N~i~~~~~----------------------------~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~ 284 (851)
..++...+..+....... .......+....+++.+++.++.+... + .+.
T Consensus 249 ~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~-~~~ 325 (635)
T 4g8a_A 249 AGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--K-DFS 325 (635)
T ss_dssp TTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC--G-GGG
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc--c-ccc
Confidence 666655543332211000 000112234455667777777665321 1 111
Q ss_pred cccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccc--cccccccccCCC
Q 046438 285 NLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEG--RILDDICRLARL 362 (851)
Q Consensus 285 ~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L 362 (851)
...+++.|++.+|.+....+ ..+..|+.+++..|.+... .....+++|+.|++++|.+.. ..+..+..+.+|
T Consensus 326 -~~~~L~~L~l~~~~~~~~~~---~~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L 399 (635)
T 4g8a_A 326 -YNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISL 399 (635)
T ss_dssp -SCCCCSEEEEESCEESSCCC---CBCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCC
T ss_pred -cchhhhhhhcccccccCcCc---ccchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhh
Confidence 22368888888888875443 3466788888888887632 334578999999999999864 345566778899
Q ss_pred CEEEccCcccCCCCCccccCCccccceecccCcCccCc--hhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccC
Q 046438 363 SSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVP--STFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSR 440 (851)
Q Consensus 363 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 440 (851)
+.++++.|.+. ..+..+..+++|+.+++++|+....+ ..+..+.+++.++++.|.+.+..+..+..++.|+.|++++
T Consensus 400 ~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~ 478 (635)
T 4g8a_A 400 KYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 478 (635)
T ss_dssp CEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTT
T ss_pred hhhhccccccc-cccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 99999999887 45667888999999999999877543 4678899999999999999989999999999999999999
Q ss_pred Cccc-ccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccC
Q 046438 441 NNLS-GDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEI 519 (851)
Q Consensus 441 N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~ 519 (851)
|++. +..|+.|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++.+
T Consensus 479 N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~ 558 (635)
T 4g8a_A 479 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 558 (635)
T ss_dssp CEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCC
T ss_pred cccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCC
Confidence 9854 457889999999999999999999989999999999999999999999999999999999999999999999998
Q ss_pred CCCC-cc-cccCcccccCCcCccCCC
Q 046438 520 PRGG-TL-ANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 520 p~~~-~~-~~l~~~~~~~n~~~c~~~ 543 (851)
|..- .+ ..+..+.+.+||+.|++.
T Consensus 559 ~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 559 KQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp SSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred HHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 8652 23 578889999999999875
No 24
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=8.4e-45 Score=421.11 Aligned_cols=463 Identities=20% Similarity=0.166 Sum_probs=369.6
Q ss_pred CCCCCCcEEeCCCCCCCCCCCcchhcCCcccccccccccccccCCCccccCCCCccEEeccccccccccchhhcCccccc
Q 046438 60 FNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQ 139 (851)
Q Consensus 60 ~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 139 (851)
..+...+++|+++|+++ .+|..++ ++|++|+|++|.|++..|..|.++++|++|+|++|.+++..|+.|+++++|+
T Consensus 28 ~~~~~~~~l~ls~~~L~-~ip~~~~---~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 103 (562)
T 3a79_B 28 FSNELESMVDYSNRNLT-HVPKDLP---PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLE 103 (562)
T ss_dssp -----CCEEECTTSCCC-SCCTTSC---TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCC
T ss_pred cccCCCcEEEcCCCCCc-cCCCCCC---CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCC
Confidence 44556699999999999 7998653 8999999999999988889999999999999999999988899999999999
Q ss_pred EEEccCccccCCCCccccCCCcCcEEEeeccccccccchhHhhhcccccccccccccccccCCccccccCCC--cEEecC
Q 046438 140 ALGLLSNNLVGVVPATLFNISTLKILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKL--SICELP 217 (851)
Q Consensus 140 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L--~~L~L~ 217 (851)
+|++++|+++. +|.. .+++|++|+|++|++++......+..+++|++|++++|++++. .+..+++| +.|+++
T Consensus 104 ~L~Ls~N~l~~-lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~ 177 (562)
T 3a79_B 104 YLDVSHNRLQN-ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLD 177 (562)
T ss_dssp EEECTTSCCCE-ECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEE
T ss_pred EEECCCCcCCc-cCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEee
Confidence 99999999995 4544 8999999999999998533334566899999999999999864 34555666 999999
Q ss_pred CCCC--ccccCccccCCC-CcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCC---Ccccccccccc
Q 046438 218 DNSF--SGFIPNRFHNMR-NLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLP---SSIGNLSLSME 291 (851)
Q Consensus 218 ~n~l--~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p---~~~~~~~~~L~ 291 (851)
+|.+ ++..|..|..+. ..-.+++++|.+..... ...+..+++|+.+++++|+.....++ ..+... ..++
T Consensus 178 ~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~----~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l-~~L~ 252 (562)
T 3a79_B 178 LVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQV----NMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRG-PTLL 252 (562)
T ss_dssp ESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCC----EEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSC-SSCE
T ss_pred cccccccccCcccccccCcceEEEEecCccchhhhh----hhcccccceEEEecccccccccchHHHHHHHHhcc-Ccce
Confidence 9999 888888888765 22366888888775322 22466789999999999963111111 122222 3677
Q ss_pred EEEeecCccccCCCcc---cccccCCcEEEecCCCCCCCcCccc-----cCCCCCcEEEcccccccccccccccc---cC
Q 046438 292 RFYLHNCNIRGSIPKE---MGNLINLIIIRLGYNKLNGSIPSTL-----SRLEKLQILGLENNQLEGRILDDICR---LA 360 (851)
Q Consensus 292 ~L~L~~n~i~~~~p~~---l~~l~~L~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~n~l~~~~~~~~~~---l~ 360 (851)
.++++++.+.+..... ....++|++|++++|.+.+.+|..+ ..++.|+.++++.|.+ ......+.. ..
T Consensus 253 ~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~~p~~~~~~~~~~~ 331 (562)
T 3a79_B 253 NVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-LFSKEALYSVFAEM 331 (562)
T ss_dssp EEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-SSCHHHHHHHHHTC
T ss_pred EEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee-ecChhhhhhhhccC
Confidence 7888877765422111 1223599999999999998888887 7777888888888877 222233333 36
Q ss_pred CCCEEEccCcccCCCCCccccCCccccceecccCcCcc-CchhhcccCcceEEEecCCCCCCC--Cccccccchhhhhhh
Q 046438 361 RLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTF-VPSTFWNLTNILMVDLSSNPLSGS--LPLEIGNLKVLVELY 437 (851)
Q Consensus 361 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~ 437 (851)
+|+.|++++|.+.... ....+++|++|++++|+++. +|..+.++++|++|+|++|++++. .|..++.+++|++|+
T Consensus 332 ~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ 409 (562)
T 3a79_B 332 NIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLD 409 (562)
T ss_dssp CCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEE
T ss_pred cceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEE
Confidence 7999999999986332 23688999999999999996 688899999999999999999963 356799999999999
Q ss_pred ccCCcccccCCc-ccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCcccc
Q 046438 438 LSRNNLSGDIPT-TIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLE 516 (851)
Q Consensus 438 L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~ 516 (851)
+++|++++.+|. .+..+++|+.|++++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++
T Consensus 410 l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~ 486 (562)
T 3a79_B 410 VSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK 486 (562)
T ss_dssp CTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC
T ss_pred CCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC
Confidence 999999974554 589999999999999999987776654 79999999999999 68877779999999999999999
Q ss_pred ccCCC-CCcccccCcccccCCcCccCCC
Q 046438 517 GEIPR-GGTLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 517 ~~~p~-~~~~~~l~~~~~~~n~~~c~~~ 543 (851)
..++. ...+..+..+.+.+|++.|+++
T Consensus 487 ~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 487 SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 65444 4567888889999999999876
No 25
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=5.4e-45 Score=385.47 Aligned_cols=199 Identities=26% Similarity=0.368 Sum_probs=181.2
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEecc
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYM 704 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 704 (851)
+.|++.+.||+|+||+||+|++. +|+.||||+++.......+.+.+|++++++++|||||++++++.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46999999999999999999985 68999999998765555677899999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCccc
Q 046438 705 PKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMKH 784 (851)
Q Consensus 705 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 784 (851)
+||+|.+++.. ..+++..+..++.||+.||+|| |++||+||||||+|||++.++.+||+|||+|+....... ..
T Consensus 154 ~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~ 227 (346)
T 4fih_A 154 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RR 227 (346)
T ss_dssp TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CB
T ss_pred CCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-cc
Confidence 99999998865 4589999999999999999999 889999999999999999999999999999987754332 34
Q ss_pred cccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 785 TQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 785 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.+.+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~ 273 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 273 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 5678999999999999999999999999999999999999999763
No 26
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.6e-45 Score=380.10 Aligned_cols=201 Identities=27% Similarity=0.445 Sum_probs=181.3
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
++|++.+.||+|+||+||+|++. +|+.||+|++++.. ....+.+.+|++++++++|||||++++++++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 56999999999999999999984 68999999997542 334577999999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC-
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE- 780 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~- 780 (851)
|||+||+|.+++... +.+++..+..++.||+.|++|| |++||+||||||+|||++.++.+||+|||+|+......
T Consensus 112 Ey~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~yl---H~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYL---HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 999999999998654 5689999999999999999999 88999999999999999999999999999998775433
Q ss_pred CccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 781 SMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 781 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.....+.+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~ 237 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 22345678999999999999999999999999999999999999999763
No 27
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.6e-45 Score=386.67 Aligned_cols=201 Identities=27% Similarity=0.410 Sum_probs=174.2
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
++|++++.||+|+||+||+|++. +|+.||||+++... ....+.+.+|++++++++|||||++++++++++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 68999999999999999999984 58999999997653 3345789999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 703 YMPKGSLEACLYSD-NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 703 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
||+||+|.+++... ...+++..++.++.||+.||+|| |++||+||||||+|||+++++.+||+|||+|+......
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~- 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV---HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV- 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence 99999999999754 44578889999999999999999 88999999999999999999999999999998764321
Q ss_pred ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
......+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~ 228 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG 228 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 1234568999999999999999999999999999999999999999764
No 28
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.5e-44 Score=377.94 Aligned_cols=203 Identities=29% Similarity=0.520 Sum_probs=178.3
Q ss_pred cCCCccceeccccceEEEEEEEc------CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL------DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKAL 699 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 699 (851)
++|.+.+.||+|+||+||+|++. ++..||||+++.......++|.+|++++++++|||||++++++.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 56888899999999999999874 367899999987766667889999999999999999999999999999999
Q ss_pred EEeccCCCChhHHhhcC------------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEE
Q 046438 700 VLDYMPKGSLEACLYSD------------NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARL 767 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~~------------~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl 767 (851)
|||||++|+|.++++.. ...+++..+..++.||++|++|| |+++|+||||||+||++++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCccCHhhEEECCCCcEEE
Confidence 99999999999999653 34689999999999999999999 7889999999999999999999999
Q ss_pred eeccCccccCCCCCc-cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 768 GDFGIAKLLSGDESM-KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 768 ~Dfg~a~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
+|||+|+........ ......||+.|+|||++.+..|+.++|||||||++|||+| |+.||.+..
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~ 235 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS 235 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 999999876433322 2223468999999999999999999999999999999999 999998754
No 29
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=5.1e-44 Score=387.45 Aligned_cols=199 Identities=26% Similarity=0.368 Sum_probs=181.3
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEecc
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYM 704 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 704 (851)
+.|++.+.||+|+||+||+|++. +|+.||||+++.......+.+.+|++++++++|||||++++++.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999999985 58999999998766555677999999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCccc
Q 046438 705 PKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMKH 784 (851)
Q Consensus 705 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 784 (851)
+||+|.+++.. ..+++..+..++.||+.||+|| |++||+||||||+|||++.+|.+||+|||+|+.+..... ..
T Consensus 231 ~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~yl---H~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~ 304 (423)
T 4fie_A 231 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RR 304 (423)
T ss_dssp TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-CB
T ss_pred CCCcHHHHHhc--cCCCHHHHHHHHHHHHHHHHHH---HHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-cc
Confidence 99999998865 3589999999999999999999 889999999999999999999999999999987654332 34
Q ss_pred cccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 785 TQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 785 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
...+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~ 350 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 350 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 5678999999999999999999999999999999999999999753
No 30
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=8e-44 Score=372.12 Aligned_cols=201 Identities=32% Similarity=0.556 Sum_probs=170.9
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
.+++++.+.||+|+||+||+|++. ..||||+++... ....+.|.+|++++++++|||||++++++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 367888999999999999999864 369999987542 3445789999999999999999999998865 56899999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC-C
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE-S 781 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~-~ 781 (851)
||++|+|.+++......+++..+..|+.||++||+|| |+++|+||||||+|||+++++.+||+|||+|+...... .
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yL---H~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL---HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 9999999999987777899999999999999999999 78899999999999999999999999999998764322 2
Q ss_pred ccccccccCccccCcccccc---CCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 782 MKHTQTLATIGYMAPEYGRE---GQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~---~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
......+||+.|+|||++.+ ..|+.++|||||||++|||+||+.||.+..
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~ 241 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC
Confidence 23345689999999999853 468999999999999999999999997643
No 31
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=376.35 Aligned_cols=203 Identities=31% Similarity=0.504 Sum_probs=172.4
Q ss_pred cCCCccceeccccceEEEEEEEc------CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL------DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKAL 699 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 699 (851)
++|.+.++||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++++|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45777899999999999999874 478899999987766677889999999999999999999999999999999
Q ss_pred EEeccCCCChhHHhhcC--------------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcE
Q 046438 700 VLDYMPKGSLEACLYSD--------------NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVA 765 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~~--------------~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~ 765 (851)
|||||++|+|.++++.. ...+++.++..++.||++|++|| |+++|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHH---hcCCeecccccHhhEEECCCCcE
Confidence 99999999999998653 24589999999999999999999 78899999999999999999999
Q ss_pred EEeeccCccccCCCCC-ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 766 RLGDFGIAKLLSGDES-MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 766 kl~Dfg~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
||+|||+|+....... .......||+.|+|||++.+..|+.++|||||||++|||+| |+.||.+..
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~ 265 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS 265 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC
Confidence 9999999987643322 22334679999999999999999999999999999999999 999997643
No 32
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.1e-43 Score=397.66 Aligned_cols=393 Identities=19% Similarity=0.217 Sum_probs=250.7
Q ss_pred EEeCCCCCCCCCCCcchhcCCcccccccccccccccCCCccccCCCCccEEecccccccccc-chhhcCcccccEEEccC
Q 046438 67 VIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEI-PHEIGNLRNLQALGLLS 145 (851)
Q Consensus 67 ~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L~~ 145 (851)
.++.+++.++ .+|. -.++|++|+|++|.|++..|..|+++++|++|+|++|.+.+.+ +..|.++++|++|++++
T Consensus 14 ~~~c~~~~l~-~lp~----l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 14 NAICINRGLH-QVPE----LPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp EEECCSSCCS-SCCC----CCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred ccCcCCCCcc-cCCC----CCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 4555555554 4554 1255566666666665555566666666666666666655332 44566666666666666
Q ss_pred ccccCCCCccccCCCcCcEEEeeccccccccch-hHhhhcccccccccccccccccCCcc-ccccCCCcEEecCCCCCcc
Q 046438 146 NNLVGVVPATLFNISTLKILQLTNNTLSGSISS-SIRLALPNLELFSLANNNFSGKIPSF-IFNASKLSICELPDNSFSG 223 (851)
Q Consensus 146 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~-~~~~~~L~~L~L~~n~l~~ 223 (851)
|++.+..|..|.++++|++|+|++|.+++..+. ..+..+++|++|+|++|.+++..|.. +.++++|+.|++++|.+++
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 666655566666666666666666666543222 22335555666666666655554443 5556666666666666666
Q ss_pred ccCccccCC--CCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccc
Q 046438 224 FIPNRFHNM--RNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIR 301 (851)
Q Consensus 224 ~~~~~~~~l--~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~ 301 (851)
..+..+..+ .+|+.|++++|.+...+......
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~---------------------------------------------- 202 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW---------------------------------------------- 202 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------------------------------------
T ss_pred cChhhhhccccccccccccccCcccccchhhccc----------------------------------------------
Confidence 655555554 45666666666665433211000
Q ss_pred cCCCcccccccCCcEEEecCCCCCCCcCccccCC---CCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCc
Q 046438 302 GSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRL---EKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPA 378 (851)
Q Consensus 302 ~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 378 (851)
.....+..+++|++|++++|.+.+..|..+... ++|+.|++++|.+.+.. +..+.+....+.
T Consensus 203 -~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~ 267 (455)
T 3v47_A 203 -EKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS--------------FGHTNFKDPDNF 267 (455)
T ss_dssp -HHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC--------------TTCCSSCCCCTT
T ss_pred -cccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc--------------cchhhhccCccc
Confidence 000112223344444444444443333333222 45555555555443211 111122222222
Q ss_pred cccC--CccccceecccCcCccC-chhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCC
Q 046438 379 CFGN--LASLRKLSFASNELTFV-PSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLK 455 (851)
Q Consensus 379 ~~~~--l~~L~~L~L~~N~l~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 455 (851)
.+.. .++|+.|++++|+++.+ |..+..+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|..++
T Consensus 268 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 347 (455)
T 3v47_A 268 TFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLD 347 (455)
T ss_dssp TTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCT
T ss_pred ccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcc
Confidence 2222 25677888888877754 55677888888888888888877788888899999999999999887888999999
Q ss_pred CccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCCcc
Q 046438 456 NLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGTL 525 (851)
Q Consensus 456 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~ 525 (851)
+|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|+.|++++|+|+|.||...++
T Consensus 348 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l 417 (455)
T 3v47_A 348 KLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 417 (455)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHH
T ss_pred cCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcchHH
Confidence 9999999999999888999999999999999999999877778899999999999999999999976554
No 33
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=9.3e-44 Score=375.04 Aligned_cols=199 Identities=25% Similarity=0.305 Sum_probs=173.1
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEecc
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYM 704 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 704 (851)
+.|++.++||+|+||+||+|++. +|+.||||+++.... ..+|++++++++|||||++++++.+++..|+|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 45788899999999999999985 589999999975422 246999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCC-cEEEeeccCccccCCCCCc-
Q 046438 705 PKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDM-VARLGDFGIAKLLSGDESM- 782 (851)
Q Consensus 705 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~-~~kl~Dfg~a~~~~~~~~~- 782 (851)
+||+|.+++... ..+++..+..++.||+.||+|| |++||+||||||+|||++.++ .+||+|||+|+........
T Consensus 133 ~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 133 EGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYL---HTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp TTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 999999999654 4689999999999999999999 889999999999999999987 6999999999876543221
Q ss_pred ---cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccCcC
Q 046438 783 ---KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSG 833 (851)
Q Consensus 783 ---~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~ 833 (851)
.....+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+....
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~ 262 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 262 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH
Confidence 123357999999999999999999999999999999999999999875443
No 34
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.5e-43 Score=363.81 Aligned_cols=196 Identities=28% Similarity=0.439 Sum_probs=169.5
Q ss_pred CCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeec----CCeeEEE
Q 046438 628 FNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTN----DDFKALV 700 (851)
Q Consensus 628 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv 700 (851)
|++.++||+|+||+||+|++. +++.||+|++.... ....+.+.+|++++++++|||||++++++.+ ++..++|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 367788999999999999985 58899999997543 3345779999999999999999999999865 3468999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCEEEC-CCCcEEEeeccCccccC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNP--VVHCDIKPSNVLLD-EDMVARLGDFGIAKLLS 777 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~--ivH~Dl~~~Nill~-~~~~~kl~Dfg~a~~~~ 777 (851)
||||+||+|.+++... ..+++..+..++.||+.||+|| |+++ |+||||||+|||++ .++.+||+|||+|+...
T Consensus 108 mEy~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~yl---H~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFL---HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999998653 5689999999999999999999 6666 99999999999997 47999999999998643
Q ss_pred CCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 778 GDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 778 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
.. ...+.+||+.|+|||++.+ .|+.++||||+||++|||+||+.||.+..
T Consensus 184 ~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~ 233 (290)
T 3fpq_A 184 AS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ 233 (290)
T ss_dssp TT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS
T ss_pred CC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 22 3345689999999998865 69999999999999999999999997643
No 35
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.7e-43 Score=362.02 Aligned_cols=198 Identities=25% Similarity=0.455 Sum_probs=162.8
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
++|++.+.||+|+||+||+|++. +|+.||+|+++... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999884 68999999997543 233467899999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
||+ +|+|.+++... ..+++..+..++.||+.|++|| |++||+||||||+||++++++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~yl---H~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~- 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYC---HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-
Confidence 999 67898888654 5699999999999999999999 88999999999999999999999999999998764322
Q ss_pred ccccccccCccccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQI-STEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
...+.+||+.|+|||++.+..| +.++||||+||++|||++|+.||.+.
T Consensus 167 -~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~ 215 (275)
T 3hyh_A 167 -FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 215 (275)
T ss_dssp ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred -ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC
Confidence 3345789999999999998876 57999999999999999999999763
No 36
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.7e-44 Score=373.63 Aligned_cols=200 Identities=28% Similarity=0.398 Sum_probs=170.6
Q ss_pred cCCCccceeccccceEEEEEEEc----CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL----DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKAL 699 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 699 (851)
++|++.+.||+|+||+||+|+.. .++.||+|+++... .....++.+|++++++++|||||++++++++++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 56999999999999999999873 36789999997543 2233468899999999999999999999999999999
Q ss_pred EEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCC
Q 046438 700 VLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~ 779 (851)
|||||+||+|.+++... ..+++..+..++.||+.|++|| |++||+||||||+|||+++++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHL---HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 99999999999998654 4689999999999999999999 8899999999999999999999999999999865433
Q ss_pred CCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 780 ESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 780 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
. ....+.+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.
T Consensus 180 ~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~ 229 (304)
T 3ubd_A 180 E-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred C-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc
Confidence 2 2344578999999999999999999999999999999999999999763
No 37
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.2e-43 Score=370.91 Aligned_cols=203 Identities=27% Similarity=0.454 Sum_probs=176.0
Q ss_pred cCCCccceeccccceEEEEEEEc------CCcEEEEEEEeecch-hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL------DGMEVAIKVFHLQLE-GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKA 698 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 698 (851)
.++++.+.||+|+||+||+|++. +++.||||+++.... ...+.|.+|++++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 35677899999999999999863 467899999975543 33578999999999999999999999999999999
Q ss_pred EEEeccCCCChhHHhhcC---------------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCC
Q 046438 699 LVLDYMPKGSLEACLYSD---------------NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDM 763 (851)
Q Consensus 699 lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~ 763 (851)
+|||||++|+|.+++... ...+++..+..++.||++|++|| |+++|+||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHH---HhCCCCCCCccccceEECCCC
Confidence 999999999999998643 23588999999999999999999 888999999999999999999
Q ss_pred cEEEeeccCccccCCCCC-ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 764 VARLGDFGIAKLLSGDES-MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 764 ~~kl~Dfg~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
.+||+|||+|+....... .......||+.|+|||++.+..|+.++|||||||++|||+| |+.||.+..
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~ 252 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 252 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC
Confidence 999999999987643322 22344679999999999999999999999999999999998 899998743
No 38
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.2e-41 Score=384.72 Aligned_cols=393 Identities=22% Similarity=0.262 Sum_probs=254.7
Q ss_pred CCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhcCCccccccccc
Q 046438 19 LQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLA 96 (851)
Q Consensus 19 L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~ 96 (851)
-+..+.++++++ .+|. + .++|++|+|++|++++..+ +..+++|++|++++|.+.+.++...|..+++|++|+|+
T Consensus 12 ~~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 12 GYNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp TTEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred ccccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 456788888887 5665 2 2778888888888887544 67788888888888888767777777888888888888
Q ss_pred ccccccCCCccccCCCCccEEeccccccccccchh--hcCcccccEEEccCccccCCCCcc-ccCCCcCcEEEeeccccc
Q 046438 97 FNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHE--IGNLRNLQALGLLSNNLVGVVPAT-LFNISTLKILQLTNNTLS 173 (851)
Q Consensus 97 ~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~-l~~l~~L~~L~L~~n~l~ 173 (851)
+|++++..|..|+++++|++|+|++|.+++..+.. |+.+++|++|++++|++.+..|.. +.++++|++|++++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 88887777777888888888888888877644444 777777777777777777666655 566777777777777776
Q ss_pred cccchhHhhhc--ccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCCc
Q 046438 174 GSISSSIRLAL--PNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHE 251 (851)
Q Consensus 174 ~~~~~~~~~~l--~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 251 (851)
+..+..+. .+ ++|+.|++++|.+.+..+..+. ......+..+++|++|++++|+++.....
T Consensus 168 ~~~~~~l~-~l~~~~L~~L~l~~n~l~~~~~~~~~----------------~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~ 230 (455)
T 3v47_A 168 SICEEDLL-NFQGKHFTLLRLSSITLQDMNEYWLG----------------WEKCGNPFKNTSITTLDLSGNGFKESMAK 230 (455)
T ss_dssp CCCTTTSG-GGTTCEEEEEECTTCBCTTCSTTCTT----------------HHHHCCTTTTCEEEEEECTTSCCCHHHHH
T ss_pred ccChhhhh-ccccccccccccccCcccccchhhcc----------------ccccccccccceeeeEecCCCcccccchh
Confidence 44333322 22 3444455554444432222110 00001122345555666655555431100
Q ss_pred chhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCcc
Q 046438 252 LSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPST 331 (851)
Q Consensus 252 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~ 331 (851)
.+......++|+.|++++|.... .. +..+.+.+..+..
T Consensus 231 --~~~~~~~~~~L~~L~l~~~~~~~--------------------------~~--------------~~~~~~~~~~~~~ 268 (455)
T 3v47_A 231 --RFFDAIAGTKIQSLILSNSYNMG--------------------------SS--------------FGHTNFKDPDNFT 268 (455)
T ss_dssp --HHHHHTTTCCEEEEECTTCTTTS--------------------------CC--------------TTCCSSCCCCTTT
T ss_pred --hhhccccccceeeEeeccccccc--------------------------cc--------------cchhhhccCcccc
Confidence 00011112344444444433211 00 0011111111111
Q ss_pred ccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccC-chhhcccCcce
Q 046438 332 LSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFV-PSTFWNLTNIL 410 (851)
Q Consensus 332 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-p~~~~~l~~L~ 410 (851)
+..+ ..++|+.|++++|++.+..|..|..+++|++|++++|+++.+ |..+.++++|+
T Consensus 269 ~~~~----------------------~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 326 (455)
T 3v47_A 269 FKGL----------------------EASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLL 326 (455)
T ss_dssp TGGG----------------------TTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred cccc----------------------cccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCC
Confidence 1111 124556666666666655666666666777777777777655 44677777888
Q ss_pred EEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCc
Q 046438 411 MVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNI 490 (851)
Q Consensus 411 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 490 (851)
+|+|++|++++..|..|+.+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|++|+|++|+
T Consensus 327 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 406 (455)
T 3v47_A 327 KLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 406 (455)
T ss_dssp EEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCC
Confidence 88888888877778888888899999999999988888899999999999999999997777788999999999999999
Q ss_pred ccccCC
Q 046438 491 LSGIIP 496 (851)
Q Consensus 491 l~~~~p 496 (851)
+++..|
T Consensus 407 l~~~~~ 412 (455)
T 3v47_A 407 WDCSCP 412 (455)
T ss_dssp BCCCTT
T ss_pred cccCCC
Confidence 998766
No 39
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=3.3e-41 Score=377.42 Aligned_cols=410 Identities=23% Similarity=0.252 Sum_probs=207.1
Q ss_pred CCCCCCCCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCC-------------CcEEeCCCCCC
Q 046438 11 SQLGSLSSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSS-------------LQVIDLSDNRL 75 (851)
Q Consensus 11 ~~l~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~-------------L~~L~Ls~n~l 75 (851)
+.-.+.++|++|++++|.+ +.+|.+++.+++|++|++++|++++..| +..+.+ +++|++++|.+
T Consensus 5 p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l 83 (454)
T 1jl5_A 5 PRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGL 83 (454)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCC
T ss_pred ccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcc
Confidence 3333568899999999999 5889889999999999999999887655 556655 48888888888
Q ss_pred CCCCCcchhcCCcccccccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCcc
Q 046438 76 SGELPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPAT 155 (851)
Q Consensus 76 ~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 155 (851)
+ .+|.. .++|++|++++|.+++ +|.. +++|++|++++|.+++ +|.. .++|++|++++|++++ +| .
T Consensus 84 ~-~lp~~----~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~ 148 (454)
T 1jl5_A 84 S-SLPEL----PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-E 148 (454)
T ss_dssp S-CCCSC----CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-C
T ss_pred c-cCCCC----cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-c
Confidence 7 55542 4678888888888876 5543 3678888888888874 3321 1678888888888875 45 4
Q ss_pred ccCCCcCcEEEeeccccccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCc
Q 046438 156 LFNISTLKILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNL 235 (851)
Q Consensus 156 l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L 235 (851)
+.++++|++|++++|++++ ++.. .++|++|++++|++++ +| .+.++++|+.|++++|.++++.. . .++|
T Consensus 149 ~~~l~~L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~-~---~~~L 217 (454)
T 1jl5_A 149 LQNSSFLKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPD-L---PLSL 217 (454)
T ss_dssp CTTCTTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCC-C---CTTC
T ss_pred cCCCCCCCEEECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCC-C---cCcc
Confidence 7788888888888888773 4432 3467777777777765 33 46666667777777776665321 1 1466
Q ss_pred ceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCc
Q 046438 236 KELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLI 315 (851)
Q Consensus 236 ~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~ 315 (851)
++|++++|.++.++ .+..+++|++|++++|++.. +|. . .++|+
T Consensus 218 ~~L~l~~n~l~~lp-------~~~~l~~L~~L~l~~N~l~~--l~~-------------------------~---~~~L~ 260 (454)
T 1jl5_A 218 ESIVAGNNILEELP-------ELQNLPFLTTIYADNNLLKT--LPD-------------------------L---PPSLE 260 (454)
T ss_dssp CEEECCSSCCSSCC-------CCTTCTTCCEEECCSSCCSS--CCS-------------------------C---CTTCC
T ss_pred cEEECcCCcCCccc-------ccCCCCCCCEEECCCCcCCc--ccc-------------------------c---ccccC
Confidence 66666666666433 14455666666666665532 221 1 24455
Q ss_pred EEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCC-ccccceecccC
Q 046438 316 IIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNL-ASLRKLSFASN 394 (851)
Q Consensus 316 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~N 394 (851)
.|++++|++.+ +|.. .++|++|++++|.+++.. . + .++|+.|++++|++.+. + .+ ++|++|++++|
T Consensus 261 ~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~-~-~--~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N 327 (454)
T 1jl5_A 261 ALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLS-E-L--PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNN 327 (454)
T ss_dssp EEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEES-C-C--CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSS
T ss_pred EEECCCCcccc-cCcc---cCcCCEEECcCCccCccc-C-c--CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCC
Confidence 55555555553 2322 245566666666555421 1 0 14566666666666531 1 12 36666777777
Q ss_pred cCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccc--cCCcccCCCCCccEEEccCcccCCCCc
Q 046438 395 ELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSG--DIPTTIGGLKNLQNLSLGDNNLQGSIP 472 (851)
Q Consensus 395 ~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~ 472 (851)
+++.+|.. +++|+.|++++|+++ .+|. .+++|++|++++|++++ .+|.+++. |+.|.+.+.+|
T Consensus 328 ~l~~lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~ 392 (454)
T 1jl5_A 328 KLIELPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVP 392 (454)
T ss_dssp CCSCCCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC------
T ss_pred cccccccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccc
Confidence 66666553 466777777777776 3444 35667777777777775 45554432 23456666666
Q ss_pred ccccCCCCCCEEECCCCcccc--cCCccccccccccceeccCccccccCCC
Q 046438 473 NSIGDLISLECLDLSNNILSG--IIPSSLEKLLYLKYLNVSFNRLEGEIPR 521 (851)
Q Consensus 473 ~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~l~l~~N~l~~~~p~ 521 (851)
.. +++|+.|++++|++++ .+|.+ ++.|.+++|.+.+..|.
T Consensus 393 ~~---~~~L~~L~ls~N~l~~~~~iP~s------l~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 393 EL---PQNLKQLHVETNPLREFPDIPES------VEDLRMNSERVVDPYEF 434 (454)
T ss_dssp ---------------------------------------------------
T ss_pred cc---cCcCCEEECCCCcCCccccchhh------HhheeCcCcccCCcccc
Confidence 53 4678888888888886 55533 45667788888777664
No 40
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=9.2e-42 Score=357.71 Aligned_cols=198 Identities=28% Similarity=0.475 Sum_probs=160.8
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch-hhHHHHHHHHHHHhhcCCCcccceeeeeecCC--------
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE-GALESFNAECEVLRSIRHRNLVRIISSCTNDD-------- 695 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-------- 695 (851)
.+|++++.||+|+||+||+|++. +|+.||||+++.... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45899999999999999999984 689999999976543 34567899999999999999999999987544
Q ss_pred ----eeEEEEeccCCCChhHHhhcCCC--CcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEee
Q 046438 696 ----FKALVLDYMPKGSLEACLYSDNS--NLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGD 769 (851)
Q Consensus 696 ----~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~D 769 (851)
..|+|||||++|+|.+++..... ..++..++.++.||++|++|| |++||+||||||+||+++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~yl---H~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFL---HSKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHH---HHCcCccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999865432 345566788999999999999 889999999999999999999999999
Q ss_pred ccCccccCCCCC-----------ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 770 FGIAKLLSGDES-----------MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 770 fg~a~~~~~~~~-----------~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
||+|+....... ......+||+.|+|||++.+..|+.++||||+||++|||++ ||..
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~ 229 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST 229 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC
Confidence 999987643221 12234579999999999999999999999999999999996 7764
No 41
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=8.8e-41 Score=374.00 Aligned_cols=404 Identities=25% Similarity=0.301 Sum_probs=210.9
Q ss_pred CCCCcEEeCCCCCCCCCCCcchhcCCcccccccccccccccCCCccccCCCCc-------------cEEecccccccccc
Q 046438 62 MSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSL-------------TSIDLSENHLMGEI 128 (851)
Q Consensus 62 ~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L-------------~~L~Ls~n~l~~~~ 128 (851)
.+.|++|++++|.+ +.+|+. ++.+++|++|++++|.+.+.+|..++.+++| ++|++++|.+++ +
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~-i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-l 86 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVE-AENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-L 86 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-C
T ss_pred cccchhhhcccCch-hhCChh-HhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-C
Confidence 45566666666666 466665 5667777777777777777777777766654 778888888774 3
Q ss_pred chhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeeccccccccchhHhhhcccccccccccccccccCCcccccc
Q 046438 129 PHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNA 208 (851)
Q Consensus 129 ~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~ 208 (851)
|.. .++|++|++++|++++ +|.. +++|+.|++++|++++ ++. ..++|++|++++|++++ +| .+.++
T Consensus 87 p~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~----~~~~L~~L~L~~n~l~~-lp-~~~~l 152 (454)
T 1jl5_A 87 PEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSD----LPPLLEYLGVSNNQLEK-LP-ELQNS 152 (454)
T ss_dssp CSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCS----CCTTCCEEECCSSCCSS-CC-CCTTC
T ss_pred CCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccC----CCCCCCEEECcCCCCCC-Cc-ccCCC
Confidence 432 3677888888888776 4433 3677888888887763 221 12577777888777775 45 47777
Q ss_pred CCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccc
Q 046438 209 SKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSL 288 (851)
Q Consensus 209 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~ 288 (851)
++|+.|++++|+++++ |.. ..+|++|++++|+++.++ .+..+++|++|++++|++.. +|.. ..
T Consensus 153 ~~L~~L~l~~N~l~~l-p~~---~~~L~~L~L~~n~l~~l~-------~~~~l~~L~~L~l~~N~l~~--l~~~----~~ 215 (454)
T 1jl5_A 153 SFLKIIDVDNNSLKKL-PDL---PPSLEFIAAGNNQLEELP-------ELQNLPFLTAIYADNNSLKK--LPDL----PL 215 (454)
T ss_dssp TTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSSCC-------CCTTCTTCCEEECCSSCCSS--CCCC----CT
T ss_pred CCCCEEECCCCcCccc-CCC---cccccEEECcCCcCCcCc-------cccCCCCCCEEECCCCcCCc--CCCC----cC
Confidence 7777777777777763 322 247777777777777643 35667777777777777743 3322 23
Q ss_pred cccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEcc
Q 046438 289 SMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLD 368 (851)
Q Consensus 289 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 368 (851)
+|+.|++++|+++ .+| .++.+++|++|++++|++++ +|.. .++|++|++++|++++ +|.. .++|+.|+++
T Consensus 216 ~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls 285 (454)
T 1jl5_A 216 SLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVS 285 (454)
T ss_dssp TCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECC
T ss_pred cccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECc
Confidence 6677777777776 455 36677777777777777764 3332 3567777777777665 2222 3566677777
Q ss_pred CcccCCCCCccccCCccccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCC
Q 046438 369 HNKLSGSIPACFGNLASLRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIP 448 (851)
Q Consensus 369 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 448 (851)
+|++++. +.. .++|++|++++|+++.++.. .++|+.|++++|++++ +|.. +++|++|++++|+++ .+|
T Consensus 286 ~N~l~~l-~~~---~~~L~~L~l~~N~l~~i~~~---~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp 353 (454)
T 1jl5_A 286 ENIFSGL-SEL---PPNLYYLNASSNEIRSLCDL---PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVP 353 (454)
T ss_dssp SSCCSEE-SCC---CTTCCEEECCSSCCSEECCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCC
T ss_pred CCccCcc-cCc---CCcCCEEECcCCcCCcccCC---cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-ccc
Confidence 7766642 111 14666667777666654421 1356666666666664 4433 356666666666666 344
Q ss_pred cccCCCCCccEEEccCcccCC--CCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccc--cCCCCCc
Q 046438 449 TTIGGLKNLQNLSLGDNNLQG--SIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEG--EIPRGGT 524 (851)
Q Consensus 449 ~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~--~~p~~~~ 524 (851)
. .+++|++|++++|++++ .+|.+++. |+.|.+.+.+|.. +++|+.|++++|++++ .+|..
T Consensus 354 ~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~s-- 417 (454)
T 1jl5_A 354 E---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPES-- 417 (454)
T ss_dssp C---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC------------------------------------
T ss_pred c---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccchhh--
Confidence 4 35666666666666665 44443332 2335555555543 3889999999999998 66642
Q ss_pred ccccCcccccCCcCcc
Q 046438 525 LANFTSESFMGNDLLC 540 (851)
Q Consensus 525 ~~~l~~~~~~~n~~~c 540 (851)
+....+.+|...|
T Consensus 418 ---l~~L~~~~~~~~~ 430 (454)
T 1jl5_A 418 ---VEDLRMNSERVVD 430 (454)
T ss_dssp ----------------
T ss_pred ---HhheeCcCcccCC
Confidence 4444455554444
No 42
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.1e-41 Score=364.24 Aligned_cols=214 Identities=24% Similarity=0.418 Sum_probs=182.0
Q ss_pred cHHHHHHHhcCCCccceeccccceEEEEEEEcC------CcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCC-Cccccee
Q 046438 617 SYQELLQATDQFNVNNLIGSGSFGSVYRGRFLD------GMEVAIKVFHLQL-EGALESFNAECEVLRSIRH-RNLVRII 688 (851)
Q Consensus 617 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h-~niv~~~ 688 (851)
..++++...++|++.+.||+|+||+||+|++.. ++.||||+++... ....+.+.+|++++.+++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 334455567889999999999999999998743 3579999997653 3345679999999999965 8999999
Q ss_pred eeeecC-CeeEEEEeccCCCChhHHhhcC---------------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCC
Q 046438 689 SSCTND-DFKALVLDYMPKGSLEACLYSD---------------NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDI 752 (851)
Q Consensus 689 ~~~~~~-~~~~lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl 752 (851)
++|.++ +..++|||||++|+|.++++.. ...+++..+..++.||++|++|| |+++|+||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yL---H~~~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHH---HHTTCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhH---hhCCeecCcc
Confidence 998764 5789999999999999998653 23478999999999999999999 8889999999
Q ss_pred CCCCEEECCCCcEEEeeccCccccCCCCC-ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 753 KPSNVLLDEDMVARLGDFGIAKLLSGDES-MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 753 ~~~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
||+||++++++.+||+|||+|+....... .......||+.|+|||++.+..|+.++|||||||++|||+| |+.||.+.
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999987654333 23345678999999999999999999999999999999998 99999875
Q ss_pred CcC
Q 046438 831 FSG 833 (851)
Q Consensus 831 ~~~ 833 (851)
...
T Consensus 292 ~~~ 294 (353)
T 4ase_A 292 KID 294 (353)
T ss_dssp CCS
T ss_pred CHH
Confidence 433
No 43
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.2e-41 Score=354.16 Aligned_cols=200 Identities=27% Similarity=0.398 Sum_probs=162.9
Q ss_pred cCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCC----eeEEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDD----FKALVL 701 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 701 (851)
++|.+.+.||+|+||+||+|++ +|+.||||+++..... ....+.|+..+.+++|||||++++++.+++ ..++||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 4578889999999999999998 7899999999754322 122344555667889999999999997654 579999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEecCCCCCCEEECCCCcEEEeeccCcccc
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFG-----HPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~-----h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
|||++|+|.++++. ..+++..+.+++.|+++|++|||.. |..+|+||||||+|||++.++.+||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~--~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 99999999999965 3588999999999999999999642 3459999999999999999999999999999876
Q ss_pred CCCCCc---cccccccCccccCccccccC------CCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 777 SGDESM---KHTQTLATIGYMAPEYGREG------QISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 777 ~~~~~~---~~~~~~~t~~y~aPE~~~~~------~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
...... .....+||+.|+|||++.+. .++.++|||||||++|||+||+.||..
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~ 220 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCc
Confidence 433221 22345799999999998754 367899999999999999999887654
No 44
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3.8e-40 Score=355.19 Aligned_cols=202 Identities=23% Similarity=0.329 Sum_probs=172.1
Q ss_pred HHHhcCCCccceeccccceEEEEEEEc----CCcEEEEEEEeecchhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCe
Q 046438 622 LQATDQFNVNNLIGSGSFGSVYRGRFL----DGMEVAIKVFHLQLEGALESFNAECEVLRSI-RHRNLVRIISSCTNDDF 696 (851)
Q Consensus 622 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 696 (851)
....++|++.+.||+|+||+||+|+++ .++.||+|++.... ...++.+|+++++.+ +|||||++++++.+.++
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 345678999999999999999999873 36789999986543 335688999999998 69999999999999999
Q ss_pred eEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCC-CcEEEeeccCccc
Q 046438 697 KALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDED-MVARLGDFGIAKL 775 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~-~~~kl~Dfg~a~~ 775 (851)
.|+||||+++|+|.+++. .+++..+..++.||+.|++|| |++||+||||||+|||++.+ +.+||+|||+|+.
T Consensus 95 ~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~yl---H~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRI---HQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp EEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 999999999999999883 488999999999999999999 88999999999999999876 7999999999976
Q ss_pred cCCCCC---------------------------ccccccccCccccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCC
Q 046438 776 LSGDES---------------------------MKHTQTLATIGYMAPEYGREG-QISTEGDVYSFGIMLMEIFTRKRPT 827 (851)
Q Consensus 776 ~~~~~~---------------------------~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~pf 827 (851)
...... ......+||+.|+|||++.+. .|+.++||||+||++|||++|+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 532211 112345799999999998775 5899999999999999999999999
Q ss_pred CccCc
Q 046438 828 DEIFS 832 (851)
Q Consensus 828 ~~~~~ 832 (851)
....+
T Consensus 248 ~~~~~ 252 (361)
T 4f9c_A 248 YKASD 252 (361)
T ss_dssp SCCSS
T ss_pred CCCCC
Confidence 65443
No 45
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2e-39 Score=363.38 Aligned_cols=217 Identities=16% Similarity=0.169 Sum_probs=155.4
Q ss_pred ccccCCCCCCCCCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCcccccccCCCCCCCcEEeCCCCCCCCCCCcchhc
Q 046438 6 TGTVPSQLGSLSSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFPFFNMSSLQVIDLSDNRLSGELPANIFS 85 (851)
Q Consensus 6 ~~~~p~~l~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 85 (851)
++.-|.+++++++|++|++++|++++. | .+..+++|++|+|++|++++. ++..+++|++|++++|++++ ++ ++
T Consensus 31 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~~~~l~~L~~L~Ls~N~l~~-~~---~~ 103 (457)
T 3bz5_A 31 QATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-DLSQNTNLTYLACDSNKLTN-LD---VT 103 (457)
T ss_dssp CTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-CCTTCTTCSEEECCSSCCSC-CC---CT
T ss_pred CcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-ccccCCCCCEEECcCCCCce-ee---cC
Confidence 344555677888899999999988864 5 688888999999999988875 58888888888888888884 44 67
Q ss_pred CCcccccccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEE
Q 046438 86 YLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKIL 165 (851)
Q Consensus 86 ~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 165 (851)
.+++|++|+|++|++++. | ++.+++|++|++++|.+++. + ++.+++|++|++++|+..+.+ .+..+++|+.|
T Consensus 104 ~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L 175 (457)
T 3bz5_A 104 PLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTL 175 (457)
T ss_dssp TCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEE
Confidence 788888888888888864 3 77888888888888888853 3 777888888888888554444 46677788888
Q ss_pred EeeccccccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccc
Q 046438 166 QLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYI 245 (851)
Q Consensus 166 ~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i 245 (851)
++++|++++ ++ +..+++|++|++++|++++. .+..+++|+.|++++|+++++ | +..+++|++|++++|++
T Consensus 176 ~ls~n~l~~-l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~l 245 (457)
T 3bz5_A 176 DCSFNKITE-LD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNPL 245 (457)
T ss_dssp ECCSSCCCC-CC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCC
T ss_pred ECCCCccce-ec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEeeCCcC
Confidence 888887774 33 34566666666666666643 245555666666666666553 2 55555555555555555
Q ss_pred cC
Q 046438 246 TS 247 (851)
Q Consensus 246 ~~ 247 (851)
+.
T Consensus 246 ~~ 247 (457)
T 3bz5_A 246 TE 247 (457)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 46
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2e-38 Score=358.48 Aligned_cols=151 Identities=27% Similarity=0.433 Sum_probs=79.5
Q ss_pred ccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccCchhhcccCcceE
Q 046438 332 LSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPSTFWNLTNILM 411 (851)
Q Consensus 332 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~ 411 (851)
+..+++|+.|++++|.+++..+ +..+++|+.|++++|++.+..+ +..+++|+.|++++|+++.++. +..+++|+.
T Consensus 239 l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~ 313 (466)
T 1o6v_A 239 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP-ISNLKNLTY 313 (466)
T ss_dssp GGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSE
T ss_pred hhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh-hcCCCCCCE
Confidence 3334444444444444443222 3444444444444444443222 4445555555555555554443 455555555
Q ss_pred EEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcc
Q 046438 412 VDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNIL 491 (851)
Q Consensus 412 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 491 (851)
|++++|++++..| +..+++|++|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++
T Consensus 314 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~ 387 (466)
T 1o6v_A 314 LTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAW 387 (466)
T ss_dssp EECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEE
T ss_pred EECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcc
Confidence 5555555554433 45555666666666666532 345666666666666666665444 56666666666666666
Q ss_pred cc
Q 046438 492 SG 493 (851)
Q Consensus 492 ~~ 493 (851)
++
T Consensus 388 ~~ 389 (466)
T 1o6v_A 388 TN 389 (466)
T ss_dssp EC
T ss_pred cC
Confidence 64
No 47
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.6e-40 Score=355.64 Aligned_cols=201 Identities=27% Similarity=0.389 Sum_probs=172.2
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeec------CC
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTN------DD 695 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~ 695 (851)
.++|++.+.||+|+||+||+|++. +|+.||||+++... ....+.+.+|+++++.++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 367999999999999999999984 69999999997543 2345678899999999999999999998754 35
Q ss_pred eeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccc
Q 046438 696 FKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKL 775 (851)
Q Consensus 696 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~ 775 (851)
..|+|||||+ |+|.+++.. ...+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+|+.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~-~~~l~~~~~~~~~~qil~al~yl---H~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYM---HSAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTS-SSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HHCcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 7899999996 678888854 45799999999999999999999 889999999999999999999999999999987
Q ss_pred cCCCC---CccccccccCccccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 776 LSGDE---SMKHTQTLATIGYMAPEYGREG-QISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 776 ~~~~~---~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
..... .....+.+||+.|+|||++.+. .|+.++||||+||++|||++|+.||.+.
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~ 266 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC
Confidence 64321 2234457899999999998775 5689999999999999999999999753
No 48
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.2e-39 Score=368.42 Aligned_cols=198 Identities=28% Similarity=0.378 Sum_probs=172.4
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHH---HHHHHHHhhcCCCcccceeeeeecCCeeE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESF---NAECEVLRSIRHRNLVRIISSCTNDDFKA 698 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~---~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 698 (851)
++|++.+.||+|+||+||+|++. +|+.||+|++++.. ....... +.++++++.++|||||++++++++++..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 57999999999999999999985 58999999997542 1122223 34466677789999999999999999999
Q ss_pred EEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCC
Q 046438 699 LVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSG 778 (851)
Q Consensus 699 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~ 778 (851)
+|||||+||+|.+++... ..+++..+..++.||+.||+|| |++||+||||||+|||++.+|.+||+|||+|+....
T Consensus 269 lVmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yL---H~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHM---HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 999999999999998654 4689999999999999999999 899999999999999999999999999999987643
Q ss_pred CCCccccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 779 DESMKHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 779 ~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
. ...+.+||+.|+|||++.. ..|+.++|+||+||++|||++|+.||.+.
T Consensus 345 ~---~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~ 394 (689)
T 3v5w_A 345 K---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394 (689)
T ss_dssp C---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGG
T ss_pred C---CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 3 2345789999999999964 57999999999999999999999999764
No 49
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3e-38 Score=357.09 Aligned_cols=344 Identities=29% Similarity=0.399 Sum_probs=161.2
Q ss_pred CCCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCcccccccCCCCCCCcEEeCCCCCCCCCCCcchhcCCcccccccc
Q 046438 16 LSSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFPFFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSL 95 (851)
Q Consensus 16 l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L 95 (851)
+++++.|++++|.++. +|. +..+++|++|+|++|++++..++..+++|++|++++|+++ .+++ +..+++|++|+|
T Consensus 45 l~~l~~L~l~~~~i~~-l~~-~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKS-IDG-VEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIA-DITP--LANLTNLTGLTL 119 (466)
T ss_dssp HHTCCEEECCSSCCCC-CTT-GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEEC
T ss_pred hccccEEecCCCCCcc-Ccc-hhhhcCCCEEECCCCccCCchhhhccccCCEEECCCCccc-cChh--hcCCCCCCEEEC
Confidence 4556666666666652 332 5556666666666666665555555666666666666655 2332 455555555555
Q ss_pred cccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeeccccccc
Q 046438 96 AFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNTLSGS 175 (851)
Q Consensus 96 ~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 175 (851)
++|.+++..+ +.++++|++|++++|.+.+ ++ .++.+++|++|+++ |.+.+.. .+.++++|+.|++++|.+++
T Consensus 120 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~- 191 (466)
T 1o6v_A 120 FNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSD- 191 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCC-
T ss_pred CCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCC-
Confidence 5555553321 5555555555555555542 22 24555555555553 3333221 14444445555544444432
Q ss_pred cchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCCcchhh
Q 046438 176 ISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFI 255 (851)
Q Consensus 176 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 255 (851)
. ..+..+++|+.|++++|.+++..+ ++.+++|++|++++|+++.+
T Consensus 192 ------------------------~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~------- 236 (466)
T 1o6v_A 192 ------------------------I--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI------- 236 (466)
T ss_dssp ------------------------C--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-------
T ss_pred ------------------------C--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc-------
Confidence 1 112333344444444444443322 33444445555544444432
Q ss_pred hhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCC
Q 046438 256 SSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRL 335 (851)
Q Consensus 256 ~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l 335 (851)
..+..+++|++|++++|++ .+..+ +..+++|+.|++++|.+.+..+ +..+
T Consensus 237 ~~l~~l~~L~~L~l~~n~l--------------------------~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l 286 (466)
T 1o6v_A 237 GTLASLTNLTDLDLANNQI--------------------------SNLAP--LSGLTKLTELKLGANQISNISP--LAGL 286 (466)
T ss_dssp GGGGGCTTCSEEECCSSCC--------------------------CCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred hhhhcCCCCCEEECCCCcc--------------------------ccchh--hhcCCCCCEEECCCCccCcccc--ccCC
Confidence 1223333333333333333 11111 3444455555555555543322 4445
Q ss_pred CCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccCchhhcccCcceEEEec
Q 046438 336 EKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPSTFWNLTNILMVDLS 415 (851)
Q Consensus 336 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls 415 (851)
++|+.|++++|++++..+ +..+++|+.|++++|++.+..| +..+++|++|++++|+++.++ .+..+++|+.|+++
T Consensus 287 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~ 361 (466)
T 1o6v_A 287 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVS-SLANLTNINWLSAG 361 (466)
T ss_dssp TTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECC
T ss_pred CccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCch-hhccCCCCCEEeCC
Confidence 555555555555544322 4444555555555555544333 344444555555555444442 34444445555555
Q ss_pred CCCCCCCCccccccchhhhhhhccCCccc
Q 046438 416 SNPLSGSLPLEIGNLKVLVELYLSRNNLS 444 (851)
Q Consensus 416 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 444 (851)
+|++++..| +..+++|+.|++++|+++
T Consensus 362 ~n~l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 362 HNQISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp SSCCCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred CCccCccch--hhcCCCCCEEeccCCccc
Confidence 554444333 444444444444444444
No 50
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=365.64 Aligned_cols=327 Identities=21% Similarity=0.195 Sum_probs=241.3
Q ss_pred cccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCCcchhhhhcccccccc
Q 046438 186 NLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLK 265 (851)
Q Consensus 186 ~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~ 265 (851)
++++|+|++|++++..+..|.++++|+.|+|++|.++++.|..|.++++|++|+|++|+++.++.. .+..+++|+
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~ 107 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLG-----VFTGLSNLT 107 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTT-----SSTTCTTCC
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcc-----cccCCCCCC
Confidence 344444445555444455555556666666666666666566666666666666666666554321 233444444
Q ss_pred EEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEccc
Q 046438 266 VLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLEN 345 (851)
Q Consensus 266 ~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 345 (851)
+|++++|++ .+..|..|..+++|+.|++++|.+.+..+..|..+++|++|++++
T Consensus 108 ~L~Ls~n~i--------------------------~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 161 (477)
T 2id5_A 108 KLDISENKI--------------------------VILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 161 (477)
T ss_dssp EEECTTSCC--------------------------CEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEES
T ss_pred EEECCCCcc--------------------------ccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCC
Confidence 444444443 334455666777777777777777766677777777777777777
Q ss_pred ccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcC-ccCchhhcccCcceEEEecCCCCCCCCc
Q 046438 346 NQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNEL-TFVPSTFWNLTNILMVDLSSNPLSGSLP 424 (851)
Q Consensus 346 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 424 (851)
|.+++..+..+..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+ ..+|.......+|+.|+|++|++++..+
T Consensus 162 n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 241 (477)
T 2id5_A 162 CNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPY 241 (477)
T ss_dssp CCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCH
T ss_pred CcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCH
Confidence 777776666777777888888888877777777778888888888887754 3666666666688889999998886555
Q ss_pred cccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCcccccccc
Q 046438 425 LEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLY 504 (851)
Q Consensus 425 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 504 (851)
..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++
T Consensus 242 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 321 (477)
T 2id5_A 242 LAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN 321 (477)
T ss_dssp HHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGG
T ss_pred HHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcc
Confidence 67888899999999999998777888999999999999999999888999999999999999999999877888899999
Q ss_pred ccceeccCccccccCCCCCcccccCcccccCCcCccCCC
Q 046438 505 LKYLNVSFNRLEGEIPRGGTLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 505 L~~l~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~~ 543 (851)
|+.|+|++|+|+|+|+..+.+.+.....+.++...|+.|
T Consensus 322 L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 322 LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp CCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred cCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 999999999999999765545555556778888888877
No 51
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-38 Score=356.91 Aligned_cols=365 Identities=21% Similarity=0.205 Sum_probs=239.0
Q ss_pred CCCccCCCccccCCCCCCEEEcCCCcccccccCCCCCCCcEEeCCCCCCCCCCCcchhcCCcccccccccccccccCCCc
Q 046438 27 NQLLGTIPSSIFSINTLEILDLSNNQLSGSFPFFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGHLPR 106 (851)
Q Consensus 27 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 106 (851)
....+..+..++.+++|++|+|++|++++.+.+..+++|++|++++|+++ .+| ++.+++|++|+|++|++++. +
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~l~~l~~L~~L~Ls~n~l~-~~~---~~~l~~L~~L~Ls~N~l~~~-~- 101 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITDMTGIEKLTGLTKLICTSNNIT-TLD---LSQNTNLTYLACDSNKLTNL-D- 101 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCCCTTGGGCTTCSEEECCSSCCS-CCC---CTTCTTCSEEECCSSCCSCC-C-
T ss_pred cCcCcccccChhHcCCCCEEEccCCCcccChhhcccCCCCEEEccCCcCC-eEc---cccCCCCCEEECcCCCCcee-e-
Confidence 33444555667778888888888888887655777788888888888877 344 66677777777777777754 2
Q ss_pred cccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeeccccccccchhHhhhccc
Q 046438 107 EIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNTLSGSISSSIRLALPN 186 (851)
Q Consensus 107 ~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~ 186 (851)
++++++|++|++++|++++ +| ++.+++|++|++++|++++. .+..+++|+.|++++|+..+.+
T Consensus 102 -~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~---------- 164 (457)
T 3bz5_A 102 -VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL---------- 164 (457)
T ss_dssp -CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC----------
T ss_pred -cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc----------
Confidence 6777777777777777774 33 66777777777777777654 2556666666666666433232
Q ss_pred ccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCCcchhhhhccccccccE
Q 046438 187 LELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKV 266 (851)
Q Consensus 187 L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~ 266 (851)
.+..+++|+.|++++|+++++. ++.+++|++|++++|+++.++ +..+++|+.
T Consensus 165 -----------------~~~~l~~L~~L~ls~n~l~~l~---l~~l~~L~~L~l~~N~l~~~~--------l~~l~~L~~ 216 (457)
T 3bz5_A 165 -----------------DVTPQTQLTTLDCSFNKITELD---VSQNKLLNRLNCDTNNITKLD--------LNQNIQLTF 216 (457)
T ss_dssp -----------------CCTTCTTCCEEECCSSCCCCCC---CTTCTTCCEEECCSSCCSCCC--------CTTCTTCSE
T ss_pred -----------------ccccCCcCCEEECCCCccceec---cccCCCCCEEECcCCcCCeec--------cccCCCCCE
Confidence 1334455555555555555432 555666666666666665431 334445555
Q ss_pred EeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccc
Q 046438 267 LSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENN 346 (851)
Q Consensus 267 L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 346 (851)
|++++|++. + +| ++.+++|+.|++++|++++.. +..+++|+.|++++|
T Consensus 217 L~Ls~N~l~--------------------------~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n 264 (457)
T 3bz5_A 217 LDCSSNKLT--------------------------E-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT 264 (457)
T ss_dssp EECCSSCCS--------------------------C-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC
T ss_pred EECcCCccc--------------------------c-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC
Confidence 555444442 2 22 455666666677766666543 344566777776655
Q ss_pred cccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCc-cCchhhcccCcceEEEecCCCCCCCCcc
Q 046438 347 QLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELT-FVPSTFWNLTNILMVDLSSNPLSGSLPL 425 (851)
Q Consensus 347 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 425 (851)
. |+.|++++|.+.+.+| ++.+++|+.|++++|... .+|. ...+|+.|++++|
T Consensus 265 ~--------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------- 317 (457)
T 3bz5_A 265 D--------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------- 317 (457)
T ss_dssp C--------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC--------
T ss_pred C--------------CCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc--------
Confidence 3 3456677777665555 456677777777777543 4443 2344555544444
Q ss_pred ccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccc
Q 046438 426 EIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYL 505 (851)
Q Consensus 426 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 505 (851)
++|++|++++|++++. + ++.+++|+.|++++|+|++ ++.|+.|++++|.++|. ..+..|
T Consensus 318 -----~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l 376 (457)
T 3bz5_A 318 -----PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITM 376 (457)
T ss_dssp -----TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEEC
T ss_pred -----ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeec
Confidence 5778888888888863 3 8888889999999998885 24677778889988875 356678
Q ss_pred cceeccCccccccCCCC
Q 046438 506 KYLNVSFNRLEGEIPRG 522 (851)
Q Consensus 506 ~~l~l~~N~l~~~~p~~ 522 (851)
..+++++|+++|.+|..
T Consensus 377 ~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 377 PKETLTNNSLTIAVSPD 393 (457)
T ss_dssp CCBCCBTTBEEEECCTT
T ss_pred CccccccCcEEEEcChh
Confidence 88899999999998853
No 52
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.5e-39 Score=366.94 Aligned_cols=200 Identities=22% Similarity=0.371 Sum_probs=182.8
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEecc
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYM 704 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 704 (851)
++|++.+.||+|+||+||+|++. +|+.||+|+++.......+.+.+|+++++.++|||||++++++.+.+..++|||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 68999999999999999999985 68999999998776666778999999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCC--CcEEEeeccCccccCCCCCc
Q 046438 705 PKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDED--MVARLGDFGIAKLLSGDESM 782 (851)
Q Consensus 705 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~--~~~kl~Dfg~a~~~~~~~~~ 782 (851)
+||+|.+++......+++..+..++.||++||+|| |++||+||||||+||+++.+ +.+||+|||+|+......
T Consensus 237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~yl---H~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~-- 311 (573)
T 3uto_A 237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM---HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-- 311 (573)
T ss_dssp CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS--
T ss_pred CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC--
Confidence 99999999977667899999999999999999999 88999999999999999854 899999999999875432
Q ss_pred cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 783 KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 783 ~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.....+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.
T Consensus 312 ~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~ 359 (573)
T 3uto_A 312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE 359 (573)
T ss_dssp EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 334568999999999999999999999999999999999999999764
No 53
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=351.54 Aligned_cols=348 Identities=23% Similarity=0.225 Sum_probs=229.8
Q ss_pred ccccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeecc
Q 046438 91 QFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNN 170 (851)
Q Consensus 91 ~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n 170 (851)
+.++.+++.++ .+|..+. ++++.|+|++|.+++..+..|.++++|++|+|++|++.+..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 35566666665 4444442 46677777777776666666667777777777777666666666666666666666666
Q ss_pred ccccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCC
Q 046438 171 TLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNH 250 (851)
Q Consensus 171 ~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 250 (851)
+++ .++...+..+++|++ |+|++|.++++.+..|.++++|++|+|++|.++.
T Consensus 91 ~l~-~~~~~~~~~l~~L~~------------------------L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~--- 142 (477)
T 2id5_A 91 RLK-LIPLGVFTGLSNLTK------------------------LDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY--- 142 (477)
T ss_dssp CCC-SCCTTSSTTCTTCCE------------------------EECTTSCCCEECTTTTTTCTTCCEEEECCTTCCE---
T ss_pred cCC-ccCcccccCCCCCCE------------------------EECCCCccccCChhHccccccCCEEECCCCccce---
Confidence 665 333333333334444 4444444443444444444444444444443332
Q ss_pred cchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCc
Q 046438 251 ELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPS 330 (851)
Q Consensus 251 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~ 330 (851)
..+..|.++++|+.|++++|.+++..+.
T Consensus 143 ----------------------------------------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 143 ----------------------------------------------------ISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp ----------------------------------------------------ECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred ----------------------------------------------------eChhhccCCCCCCEEECCCCcCcccChh
Confidence 2223344444455555555555444444
Q ss_pred cccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccCch-hhcccCcc
Q 046438 331 TLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPS-TFWNLTNI 409 (851)
Q Consensus 331 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~-~~~~l~~L 409 (851)
.+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+.+.++.......+|++|++++|+++.+|. .+..+++|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCcccc
Confidence 45555555555555555555555555566666666666665555555555555688888888888888874 67888999
Q ss_pred eEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCC
Q 046438 410 LMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNN 489 (851)
Q Consensus 410 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 489 (851)
+.|+|++|++++..+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 330 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC
Confidence 99999999998877888999999999999999999888999999999999999999999877788899999999999999
Q ss_pred cccccCCccccccccccceeccCccccccCCCC
Q 046438 490 ILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRG 522 (851)
Q Consensus 490 ~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~ 522 (851)
.+...-+ ...-...+..+.+.++...|..|..
T Consensus 331 ~l~c~c~-~~~~~~~~~~~~~~~~~~~C~~p~~ 362 (477)
T 2id5_A 331 PLACDCR-LLWVFRRRWRLNFNRQQPTCATPEF 362 (477)
T ss_dssp CEECSGG-GHHHHTTTTSSCCTTCCCBEEESGG
T ss_pred CccCccc-hHhHHhhhhccccCccCceeCCchH
Confidence 9985432 2222334455778888888887753
No 54
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.3e-36 Score=335.78 Aligned_cols=335 Identities=22% Similarity=0.225 Sum_probs=268.5
Q ss_pred CCcCcEEEeeccccccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceE
Q 046438 159 ISTLKILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKEL 238 (851)
Q Consensus 159 l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 238 (851)
+++++.|++++|.++ .+|..++..+++|++|+|++|.+++..+..+.++++|+.|+|++|.++++.|..|+++++|++|
T Consensus 44 l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 567788888888876 6777777778888888888888877777777888888888888888888777778888888888
Q ss_pred eccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEE
Q 046438 239 NLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIR 318 (851)
Q Consensus 239 ~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~ 318 (851)
+|++|+++.++.. .+..+++|++|++++|++ ++..|..+..+++|++|+
T Consensus 123 ~L~~n~l~~l~~~-----~~~~l~~L~~L~L~~n~l--------------------------~~~~~~~~~~l~~L~~L~ 171 (390)
T 3o6n_A 123 VLERNDLSSLPRG-----IFHNTPKLTTLSMSNNNL--------------------------ERIEDDTFQATTSLQNLQ 171 (390)
T ss_dssp ECCSSCCCCCCTT-----TTTTCTTCCEEECCSSCC--------------------------CBCCTTTTSSCTTCCEEE
T ss_pred ECCCCccCcCCHH-----HhcCCCCCcEEECCCCcc--------------------------CccChhhccCCCCCCEEE
Confidence 8888887765432 134455555555555544 445566778888888888
Q ss_pred ecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCcc
Q 046438 319 LGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTF 398 (851)
Q Consensus 319 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 398 (851)
+++|.+++. .+..+++|+.|++++|.+++. ....+|+.|++++|.+... |.. ..++|+.|++++|+++.
T Consensus 172 l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~ 240 (390)
T 3o6n_A 172 LSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTD 240 (390)
T ss_dssp CCSSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCC
T ss_pred CCCCcCCcc---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCcc
Confidence 888888754 255678888888888888743 3346788999999988854 332 24789999999999998
Q ss_pred CchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCC
Q 046438 399 VPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDL 478 (851)
Q Consensus 399 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 478 (851)
. ..+..+++|++|+|++|.+++..|..|..+++|++|++++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+
T Consensus 241 ~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l 317 (390)
T 3o6n_A 241 T-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQF 317 (390)
T ss_dssp C-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHH
T ss_pred c-HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCcccccc
Confidence 7 468899999999999999998889999999999999999999994 6777889999999999999998 678889999
Q ss_pred CCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCCcccccCcccccCCcCccCCC
Q 046438 479 ISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGTLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 479 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~~ 543 (851)
++|+.|+|++|++++. | +..+++|+.|++++|+|+|.+.. ..+..+....+.+++..|..+
T Consensus 318 ~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 318 DRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp TTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTT
T ss_pred CcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceeccc
Confidence 9999999999999954 4 77889999999999999998743 356777778888888888866
No 55
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.6e-37 Score=342.37 Aligned_cols=210 Identities=24% Similarity=0.363 Sum_probs=184.2
Q ss_pred HHHHHHHhcCCCccceeccccceEEEEEEEcC-CcEEEEEEEeecch---hhHHHHHHHHHHHhhcCCCcccceeeeeec
Q 046438 618 YQELLQATDQFNVNNLIGSGSFGSVYRGRFLD-GMEVAIKVFHLQLE---GALESFNAECEVLRSIRHRNLVRIISSCTN 693 (851)
Q Consensus 618 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 693 (851)
+.++....++|++.+.||+|+||+||+|++.. ++.||+|+++.... ...+.+.+|.+++..++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 44555567899999999999999999999864 78899999975321 223348899999999999999999999999
Q ss_pred CCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCc
Q 046438 694 DDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIA 773 (851)
Q Consensus 694 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a 773 (851)
.+..++||||+++|+|.+++......+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+|
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~L---H~~giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV---HQLHYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHH---HhCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 9999999999999999999977667799999999999999999999 8889999999999999999999999999999
Q ss_pred cccCCCCCccccccccCccccCccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 774 KLLSGDESMKHTQTLATIGYMAPEYGR-----EGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 774 ~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
+.............+||+.|+|||++. ...++.++||||+||++|||++|+.||...
T Consensus 223 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 284 (437)
T 4aw2_A 223 LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284 (437)
T ss_dssp EECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred hhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC
Confidence 876554444445568999999999986 567899999999999999999999999753
No 56
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=5.8e-36 Score=316.92 Aligned_cols=200 Identities=30% Similarity=0.423 Sum_probs=180.5
Q ss_pred hcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEec
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDY 703 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 703 (851)
.++|++.+.||+|+||+||+|++ .+++.||+|++........+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46799999999999999999987 46899999999876655667899999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCcc
Q 046438 704 MPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMK 783 (851)
Q Consensus 704 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 783 (851)
+++|+|.+++... .+++..+..++.|++.|++|| |++||+||||||+||+++.++.+||+|||++........ .
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 172 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHH---HhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-c
Confidence 9999999998654 588899999999999999999 888999999999999999999999999999987654332 3
Q ss_pred ccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 784 HTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 784 ~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 219 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 219 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 44567999999999999999999999999999999999999999653
No 57
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=335.17 Aligned_cols=211 Identities=26% Similarity=0.389 Sum_probs=184.6
Q ss_pred cHHHHHHHhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeee
Q 046438 617 SYQELLQATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCT 692 (851)
Q Consensus 617 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 692 (851)
.+++.....++|++.+.||+|+||+||+|++. +|+.||+|+++... ....+.+.+|.+++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34455556788999999999999999999985 68999999997532 223345889999999999999999999999
Q ss_pred cCCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccC
Q 046438 693 NDDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGI 772 (851)
Q Consensus 693 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~ 772 (851)
+.+..|+||||++||+|.+++...+..+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV---HRLGYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecccCHHHeeecCCCCEEEeechh
Confidence 99999999999999999999977666789999999999999999999 888999999999999999999999999999
Q ss_pred ccccCCCCCccccccccCccccCccccc-------cCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 773 AKLLSGDESMKHTQTLATIGYMAPEYGR-------EGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 773 a~~~~~~~~~~~~~~~~t~~y~aPE~~~-------~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
|+.............+||+.|+|||++. ...++.++||||+||++|||++|+.||...
T Consensus 209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 273 (412)
T 2vd5_A 209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD 273 (412)
T ss_dssp CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC
Confidence 9877554443344568999999999987 356899999999999999999999999764
No 58
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.9e-36 Score=323.46 Aligned_cols=217 Identities=39% Similarity=0.636 Sum_probs=189.6
Q ss_pred hccccHHHHHHHhcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchh-hHHHHHHHHHHHhhcCCCcccceeeee
Q 046438 613 WRRFSYQELLQATDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEG-ALESFNAECEVLRSIRHRNLVRIISSC 691 (851)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~ 691 (851)
...++++++....++|++.+.||+|+||+||+|++.+++.||+|+++..... ....+.+|++++++++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 3567889999999999999999999999999999878999999998754322 223689999999999999999999999
Q ss_pred ecCCeeEEEEeccCCCChhHHhhcC---CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEe
Q 046438 692 TNDDFKALVLDYMPKGSLEACLYSD---NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLG 768 (851)
Q Consensus 692 ~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~ 768 (851)
.+.+..++||||+++|+|.+++... ...+++..+..++.|++.|++|||..+..||+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 9999999999999999999998763 3348999999999999999999954444499999999999999999999999
Q ss_pred eccCccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 769 DFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 769 Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
|||+++..............||+.|+|||++.+..++.++||||+||++|||++|+.||+.
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 237 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 237 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCH
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccc
Confidence 9999987754444444556799999999999888899999999999999999999999963
No 59
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=7.3e-36 Score=320.68 Aligned_cols=200 Identities=27% Similarity=0.367 Sum_probs=177.8
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
++|++.+.||+|+||+||+|+.. +|+.||+|+++... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57999999999999999999985 58999999997642 234567889999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
||++||+|.+++... ..+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+|+.......
T Consensus 85 E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 85 EYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYL---HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp ECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 999999999888643 4688999999999999999999 888999999999999999999999999999986433222
Q ss_pred ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 161 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 208 (337)
T 1o6l_A 161 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208 (337)
T ss_dssp -CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred -cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC
Confidence 334568999999999999999999999999999999999999999753
No 60
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-35 Score=345.48 Aligned_cols=335 Identities=22% Similarity=0.226 Sum_probs=272.8
Q ss_pred CCcCcEEEeeccccccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceE
Q 046438 159 ISTLKILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKEL 238 (851)
Q Consensus 159 l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 238 (851)
+++++.|++++|.+. .+|..++..+++|++|+|++|.+++..|..+.++++|+.|+|++|.+++++|..|+++++|++|
T Consensus 50 l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 50 LNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GCCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 467778888888776 6677777778888888888888887777778888888888888888888888888888888888
Q ss_pred eccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEE
Q 046438 239 NLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIR 318 (851)
Q Consensus 239 ~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~ 318 (851)
+|++|.++.++.. .+..+++|++|++++| ++++..|..|+.+++|++|+
T Consensus 129 ~L~~n~l~~l~~~-----~~~~l~~L~~L~Ls~N--------------------------~l~~~~~~~~~~l~~L~~L~ 177 (597)
T 3oja_B 129 VLERNDLSSLPRG-----IFHNTPKLTTLSMSNN--------------------------NLERIEDDTFQATTSLQNLQ 177 (597)
T ss_dssp ECCSSCCCCCCTT-----TTTTCTTCCEEECCSS--------------------------CCCBCCTTTTTTCTTCCEEE
T ss_pred EeeCCCCCCCCHH-----HhccCCCCCEEEeeCC--------------------------cCCCCChhhhhcCCcCcEEE
Confidence 8888887765432 2344555555555544 44556677788899999999
Q ss_pred ecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCcc
Q 046438 319 LGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTF 398 (851)
Q Consensus 319 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 398 (851)
+++|.+++.. +..+++|+.|++++|.+++. ....+|+.|++++|.+....+.. .++|+.|+|++|.++.
T Consensus 178 L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~ 246 (597)
T 3oja_B 178 LSSNRLTHVD---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD 246 (597)
T ss_dssp CTTSCCSBCC---GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC
T ss_pred CcCCCCCCcC---hhhhhhhhhhhcccCccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC
Confidence 9999988653 55678899999999988753 34568999999999988443322 3689999999999997
Q ss_pred CchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCC
Q 046438 399 VPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDL 478 (851)
Q Consensus 399 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 478 (851)
. ..+..+++|+.|+|++|.+++..|..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+
T Consensus 247 ~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l 323 (597)
T 3oja_B 247 T-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQF 323 (597)
T ss_dssp C-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHH
T ss_pred C-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccC
Confidence 5 678899999999999999999999999999999999999999995 6778888999999999999999 788889999
Q ss_pred CCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCCcccccCcccccCCcCccCCC
Q 046438 479 ISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGTLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 479 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~~ 543 (851)
++|+.|+|++|++++. | +..+++|+.|++++|+|+|.++. .++..+....+.+++..|+.+
T Consensus 324 ~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 324 DRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp TTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 9999999999999964 3 67789999999999999998743 457777788889999999875
No 61
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.8e-36 Score=333.14 Aligned_cols=207 Identities=23% Similarity=0.371 Sum_probs=180.5
Q ss_pred HHHHHHhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecC
Q 046438 619 QELLQATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTND 694 (851)
Q Consensus 619 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 694 (851)
.++....++|++.+.||+|+||+||+|++. +++.||+|+++... ....+.+.+|+++++.++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344445678999999999999999999985 58899999997532 12234578999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCcc
Q 046438 695 DFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAK 774 (851)
Q Consensus 695 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~ 774 (851)
+..++||||++||+|.+++.. ..+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+|+
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~--~~~~e~~~~~~~~qi~~aL~~L---H~~givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAI---HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEeCCCCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 999999999999999998865 3588899999999999999999 88899999999999999999999999999998
Q ss_pred ccCCCCCccccccccCccccCccccccCC----CCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 775 LLSGDESMKHTQTLATIGYMAPEYGREGQ----ISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 775 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~----~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.............+||+.|+|||++.+.. ++.++||||+||++|||++|+.||...
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~ 276 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 276 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC
Confidence 76554433445678999999999987665 789999999999999999999999753
No 62
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=323.91 Aligned_cols=203 Identities=27% Similarity=0.436 Sum_probs=170.0
Q ss_pred HhcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
..++|++.+.||+|+||+||+|++ .+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 457899999999999999999998 468999999987653 223457889999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
||+++|+|.+++... ..+++..+..++.||+.|++|| |++||+||||||+||++++++.+||+|||+|........
T Consensus 88 E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 88 EYCPGGELFDYIISQ-DRLSEEETRVVFRQIVSAVAYV---HSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp ECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 999999999988653 4688999999999999999999 888999999999999999999999999999987654433
Q ss_pred ccccccccCccccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQI-STEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||++.
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 213 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD 213 (347)
T ss_dssp --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 34455689999999999988775 88999999999999999999999763
No 63
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=9e-36 Score=319.17 Aligned_cols=200 Identities=26% Similarity=0.430 Sum_probs=178.1
Q ss_pred hcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
.++|++.+.||+|+||.||+|++ .+|+.||+|++.... ....+++.+|+++++.++||||+++++++.+.+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46799999999999999999998 579999999997653 334567889999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
||+++|+|.+++... ..+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 94 e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~l---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYC---HQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp CCCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred ECCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 999999999988654 4588999999999999999999 88899999999999999999999999999998764332
Q ss_pred ccccccccCccccCccccccCCCC-cchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQIS-TEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
......||+.|+|||++.+..+. .++||||+||++|||++|+.||++.
T Consensus 169 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 217 (328)
T 3fe3_A 169 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217 (328)
T ss_dssp -GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred -ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC
Confidence 34456899999999999887765 7899999999999999999999764
No 64
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=316.24 Aligned_cols=204 Identities=25% Similarity=0.431 Sum_probs=181.4
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEecc
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYM 704 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 704 (851)
++|++.+.||+|+||+||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 57899999999999999999985 58899999987666666788999999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCc--
Q 046438 705 PKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESM-- 782 (851)
Q Consensus 705 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~-- 782 (851)
++|+|.+++......+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||+++........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYL---HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 99999999988777899999999999999999999 8889999999999999999999999999999876432211
Q ss_pred -----------cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccCc
Q 046438 783 -----------KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFS 832 (851)
Q Consensus 783 -----------~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 832 (851)
......||+.|+|||++.+..++.++||||+||++|||++|..||.....
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~ 227 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLP 227 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSC
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhh
Confidence 11145799999999999999999999999999999999999999876443
No 65
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=9.6e-36 Score=317.30 Aligned_cols=257 Identities=34% Similarity=0.591 Sum_probs=243.3
Q ss_pred cccEEEeecCcccc--CCCcccccccCCcEEEecC-CCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEE
Q 046438 289 SMERFYLHNCNIRG--SIPKEMGNLINLIIIRLGY-NKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSV 365 (851)
Q Consensus 289 ~L~~L~L~~n~i~~--~~p~~l~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 365 (851)
.++.|++++|++++ .+|..+.++++|++|++++ |.+.+.+|..|.++++|++|++++|.+++..|..+..+++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 67888888888888 8899999999999999995 99999999999999999999999999999999999999999999
Q ss_pred EccCcccCCCCCccccCCccccceecccCcCc-cCchhhcccC-cceEEEecCCCCCCCCccccccchhhhhhhccCCcc
Q 046438 366 YLDHNKLSGSIPACFGNLASLRKLSFASNELT-FVPSTFWNLT-NILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNL 443 (851)
Q Consensus 366 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 443 (851)
++++|++.+.+|..|..+++|++|++++|+++ .+|..+..++ +|+.|++++|++++..|..+..++ |++|++++|++
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 99999999999999999999999999999999 8899999998 999999999999999999999998 99999999999
Q ss_pred cccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCC
Q 046438 444 SGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGG 523 (851)
Q Consensus 444 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~ 523 (851)
++..|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|+|++|+++|.+|...
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~ 288 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCc
Confidence 999999999999999999999999976665 8899999999999999999999999999999999999999999999998
Q ss_pred cccccCcccccCCcCccCCCCCCCCCC
Q 046438 524 TLANFTSESFMGNDLLCGSPHLQVPPC 550 (851)
Q Consensus 524 ~~~~l~~~~~~~n~~~c~~~~~~~~~c 550 (851)
.+..+....+.+|+++||.| .++|
T Consensus 289 ~l~~L~~l~l~~N~~lc~~p---~~~C 312 (313)
T 1ogq_A 289 NLQRFDVSAYANNKCLCGSP---LPAC 312 (313)
T ss_dssp TGGGSCGGGTCSSSEEESTT---SSCC
T ss_pred cccccChHHhcCCCCccCCC---CCCC
Confidence 99999999999999999987 4456
No 66
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=6e-36 Score=323.56 Aligned_cols=201 Identities=25% Similarity=0.374 Sum_probs=173.4
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCeeEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSI-RHRNLVRIISSCTNDDFKAL 699 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 699 (851)
.++|++.+.||+|+||+||+|++. +++.||+|+++... ....+.+.+|.++++.+ +||||+++++++.+.+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 478999999999999999999985 58899999997642 33456688999999988 69999999999999999999
Q ss_pred EEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCC
Q 046438 700 VLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~ 779 (851)
||||++||+|.+++... ..+++..++.++.||+.|++|| |++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 102 v~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFL---HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 99999999999988654 5689999999999999999999 8889999999999999999999999999999864322
Q ss_pred CCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 780 ESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 780 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 178 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 227 (353)
T 3txo_A 178 G-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE 227 (353)
T ss_dssp ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred C-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC
Confidence 2 2344568999999999999989999999999999999999999999763
No 67
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.2e-35 Score=314.19 Aligned_cols=203 Identities=28% Similarity=0.465 Sum_probs=173.7
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467999999999999999999984 58899999986533 33456789999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||+++++|.+++... ..+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHA---HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 9999999999998654 4689999999999999999999 88899999999999999999999999999998765443
Q ss_pred CccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 781 SMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 781 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
........||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 216 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET 216 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 333444679999999999999999999999999999999999999997643
No 68
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=3.6e-35 Score=324.10 Aligned_cols=153 Identities=22% Similarity=0.198 Sum_probs=79.2
Q ss_pred CCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccCchhhcccCcceEEEec
Q 046438 336 EKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPSTFWNLTNILMVDLS 415 (851)
Q Consensus 336 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls 415 (851)
++|+.|++++|.+++. ..+..+++|+.|++++|++.+..|..|..+++|++|++++|+++.+|..+..+++|+.|+|+
T Consensus 226 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~ 303 (390)
T 3o6n_A 226 VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLS 303 (390)
T ss_dssp SSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECC
T ss_pred ccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECC
Confidence 3455555555555432 34444555555555555555444555555555555555555555554444444444444444
Q ss_pred CCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccC
Q 046438 416 SNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGII 495 (851)
Q Consensus 416 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 495 (851)
+|+++ .+|..+..+++|+.|+|++|+++. ++ +..+++|+.|++++|++++.-
T Consensus 304 ~n~l~-------------------------~~~~~~~~l~~L~~L~L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~~~~ 355 (390)
T 3o6n_A 304 HNHLL-------------------------HVERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCNS 355 (390)
T ss_dssp SSCCC-------------------------CCGGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHHH
T ss_pred CCcce-------------------------ecCccccccCcCCEEECCCCccce-eC--chhhccCCEEEcCCCCccchh
Confidence 44444 233344445556666666666653 22 555667777777777776532
Q ss_pred CccccccccccceeccCccccccCC
Q 046438 496 PSSLEKLLYLKYLNVSFNRLEGEIP 520 (851)
Q Consensus 496 p~~l~~l~~L~~l~l~~N~l~~~~p 520 (851)
... -+..+....+..+...|..|
T Consensus 356 ~~~--~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 356 LRA--LFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp HHH--HTTTCCTTTBCCCCSCCCTT
T ss_pred HHH--HHHHHHhhcccccCceeccc
Confidence 211 12334444455666555544
No 69
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.6e-35 Score=314.38 Aligned_cols=211 Identities=27% Similarity=0.366 Sum_probs=186.1
Q ss_pred ccccHHHHHHHhcC----------CCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCC
Q 046438 614 RRFSYQELLQATDQ----------FNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHR 682 (851)
Q Consensus 614 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ 682 (851)
..++++++..+.+. |+..+.||+|+||.||+|++. +|+.||||+++.......+.+.+|++++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45677887777654 677789999999999999986 6999999999876666667899999999999999
Q ss_pred cccceeeeeecCCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCC
Q 046438 683 NLVRIISSCTNDDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDED 762 (851)
Q Consensus 683 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~ 762 (851)
||+++++++...+..++||||+++++|.+++.. ..+++..+..++.|+++|++|| |++||+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYL---HAQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCC
Confidence 999999999999999999999999999998853 4689999999999999999999 78899999999999999999
Q ss_pred CcEEEeeccCccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 763 MVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 763 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
+.+||+|||++........ ......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~ 244 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD 244 (321)
T ss_dssp CCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999987654322 234567999999999999999999999999999999999999999653
No 70
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.2e-35 Score=324.53 Aligned_cols=201 Identities=25% Similarity=0.365 Sum_probs=176.1
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCeeEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSI-RHRNLVRIISSCTNDDFKAL 699 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 699 (851)
.++|++.+.||+|+||+||+|++. +++.||+|+++... ....+.+.+|..+++++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467999999999999999999985 57889999998653 22334578899999887 89999999999999999999
Q ss_pred EEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCC
Q 046438 700 VLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~ 779 (851)
||||+++|+|..++... ..+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 131 V~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~L---H~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYL---HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999888653 4689999999999999999999 8889999999999999999999999999999864322
Q ss_pred CCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 780 ESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 780 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 207 ~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~ 256 (396)
T 4dc2_A 207 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256 (396)
T ss_dssp T-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred C-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence 2 2344578999999999999999999999999999999999999999653
No 71
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.9e-36 Score=320.63 Aligned_cols=214 Identities=35% Similarity=0.611 Sum_probs=186.9
Q ss_pred ccHHHHHHHhcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCC
Q 046438 616 FSYQELLQATDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDD 695 (851)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 695 (851)
+++.++..+.++|++.+.||+|+||+||+|++.+++.||+|++........+.+.+|++++++++||||+++++++.+.+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 44445556778999999999999999999998889999999988766666788999999999999999999999999999
Q ss_pred eeEEEEeccCCCChhHHhhcCC---CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccC
Q 046438 696 FKALVLDYMPKGSLEACLYSDN---SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGI 772 (851)
Q Consensus 696 ~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~ 772 (851)
..++||||+++|+|.+++.... ..+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL---HTRAIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHh---cCCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999886532 3588999999999999999999 788999999999999999999999999999
Q ss_pred ccccCCCC-CccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccCc
Q 046438 773 AKLLSGDE-SMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFS 832 (851)
Q Consensus 773 a~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 832 (851)
++...... ........||+.|+|||++.+..++.++||||+||++|||++|+.||....+
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~ 246 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP 246 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSS
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCc
Confidence 98654322 1222345689999999999888999999999999999999999999976543
No 72
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3e-35 Score=313.67 Aligned_cols=197 Identities=27% Similarity=0.418 Sum_probs=177.0
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
++|++.+.||+|+||+||+|+.. +|+.||+|+++... ....+.+.+|..+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 57999999999999999999985 68999999997643 234567889999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
||+++|+|.+++... ..+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~--- 158 (318)
T 1fot_A 86 DYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYL---HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD--- 158 (318)
T ss_dssp CCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS---
T ss_pred eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChheEEEcCCCCEEEeecCcceecCC---
Confidence 999999999998654 4688999999999999999999 889999999999999999999999999999987543
Q ss_pred ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 206 (318)
T 1fot_A 159 -VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS 206 (318)
T ss_dssp -CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred -ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 223467999999999999999999999999999999999999999653
No 73
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.1e-35 Score=317.97 Aligned_cols=203 Identities=26% Similarity=0.408 Sum_probs=177.9
Q ss_pred HHhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCee
Q 046438 623 QATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSI-RHRNLVRIISSCTNDDFK 697 (851)
Q Consensus 623 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 697 (851)
...++|++.+.||+|+||+||+|++. +|+.||+|+++... ....+.+..|.++++.+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34578999999999999999999985 58899999997643 23456688899999887 899999999999999999
Q ss_pred EEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccC
Q 046438 698 ALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLS 777 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~ 777 (851)
++||||++||+|.+++... ..+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+|+...
T Consensus 94 ~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 169 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFL---HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM 169 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence 9999999999999988653 4688999999999999999999 88899999999999999999999999999998643
Q ss_pred CCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 778 GDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 778 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 170 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 221 (345)
T 1xjd_A 170 LGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221 (345)
T ss_dssp CTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC
Confidence 222 2344568999999999999999999999999999999999999999753
No 74
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4.4e-35 Score=317.50 Aligned_cols=200 Identities=24% Similarity=0.389 Sum_probs=178.0
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchh------hHHHHHHHHHHHhhcCCCcccceeeeeecCCee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEG------ALESFNAECEVLRSIRHRNLVRIISSCTNDDFK 697 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 697 (851)
.+.|++.+.||+|+||+||+|++. +|+.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467999999999999999999985 5899999999765322 246789999999999999999999999999999
Q ss_pred EEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCC----cEEEeeccCc
Q 046438 698 ALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDM----VARLGDFGIA 773 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~----~~kl~Dfg~a 773 (851)
++||||+++|+|.+++.. ...+++..+..++.||+.|++|| |++||+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTT-CSCCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 999999999999999854 45689999999999999999999 888999999999999998776 7999999999
Q ss_pred cccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 774 KLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 774 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~ 221 (361)
T 2yab_A 167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221 (361)
T ss_dssp EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred eEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 8765432 234567999999999999999999999999999999999999999763
No 75
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.1e-35 Score=319.37 Aligned_cols=199 Identities=28% Similarity=0.400 Sum_probs=176.6
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
++|++.+.||+|+||+||+|++. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 67999999999999999999985 58889999997543 234567889999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
||++||+|.+++.. ...+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+|......
T Consensus 95 e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-- 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALDYL---QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-- 168 (384)
T ss_dssp CCCTTEEHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT--
T ss_pred ecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCcHHHeEECCCCCEEEeccceeeeccCC--
Confidence 99999999998864 45689999999999999999999 8889999999999999999999999999999876432
Q ss_pred ccccccccCccccCcccccc---CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGRE---GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~---~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.......||+.|+|||++.. ..++.++||||+||++|||++|+.||...
T Consensus 169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~ 220 (384)
T 4fr4_A 169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR 220 (384)
T ss_dssp CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCC
Confidence 23445689999999999864 46899999999999999999999999753
No 76
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-35 Score=314.43 Aligned_cols=200 Identities=20% Similarity=0.326 Sum_probs=179.5
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEec
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDY 703 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 703 (851)
.++|++.+.||+|+||+||+|++. +++.||+|+++... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 468999999999999999999985 58889999987553 3446788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC--CCcEEEeeccCccccCCCCC
Q 046438 704 MPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE--DMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 704 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~--~~~~kl~Dfg~a~~~~~~~~ 781 (851)
+++|+|.+++......+++..+..++.||++|++|| |++||+||||||+||+++. ++.+||+|||+++......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFL---HSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 999999999977666799999999999999999999 8889999999999999987 7899999999998765432
Q ss_pred ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
......+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 206 (321)
T 1tki_A 159 -NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE 206 (321)
T ss_dssp -EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred -ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCC
Confidence 234457899999999999888999999999999999999999999764
No 77
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.9e-35 Score=312.83 Aligned_cols=204 Identities=25% Similarity=0.408 Sum_probs=175.7
Q ss_pred HhcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecch--hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLE--GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
..++|++.+.||+|+||+||+|++.+|+.||+|+++.... .....+.+|++++++++||||+++++++.+++..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 3578999999999999999999998899999999875432 23467889999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
||+++ ++.+++......+++..+..++.|++.|++|| |++||+||||||+||+++.++.+||+|||+++.......
T Consensus 99 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 99 EFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC---HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp ECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred cCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 99975 78787777667799999999999999999999 888999999999999999999999999999987643222
Q ss_pred ccccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCccCc
Q 046438 782 MKHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEIFS 832 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 832 (851)
......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....+
T Consensus 175 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 225 (311)
T 3niz_A 175 -SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD 225 (311)
T ss_dssp ----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSST
T ss_pred -cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCCh
Confidence 2334578999999999876 5689999999999999999999999976443
No 78
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3.8e-35 Score=316.71 Aligned_cols=199 Identities=26% Similarity=0.372 Sum_probs=176.5
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCeeEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSI-RHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 700 (851)
++|++.+.||+|+||+||+|++. +++.||+|+++... ....+.+.+|.++++++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57999999999999999999985 58899999998653 23456688999999988 899999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||+++|+|.+++... ..+++..++.++.||+.|++|| |++||+||||||+||+++.++.+||+|||+|+......
T Consensus 89 ~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYL---HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 9999999999988653 4688999999999999999999 88899999999999999999999999999998643222
Q ss_pred CccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 781 SMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 781 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
. .....+||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 165 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 165 D-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp C-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred C-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 2 33456899999999999999999999999999999999999999975
No 79
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.7e-35 Score=309.03 Aligned_cols=201 Identities=28% Similarity=0.482 Sum_probs=180.5
Q ss_pred cCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEeccC
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYMP 705 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 705 (851)
++|++.+.||+|+||+||+|++.+++.||+|+++.... ..+++.+|++++++++||||+++++++.+.+..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 57899999999999999999998899999999976533 34678999999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCcccc
Q 046438 706 KGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMKHT 785 (851)
Q Consensus 706 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 785 (851)
+++|.+++......+++..++.++.|+++|++|| |++||+||||||+||+++.++.+||+|||++............
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 165 (269)
T 4hcu_A 89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165 (269)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHH---HhCCeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence 9999999987777799999999999999999999 8889999999999999999999999999999876543333333
Q ss_pred ccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 786 QTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 786 ~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
...+++.|+|||++.+..++.++||||+|+++|||++ |+.||...
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~ 211 (269)
T 4hcu_A 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 211 (269)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC
Confidence 4567888999999998999999999999999999999 99999764
No 80
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.6e-35 Score=316.30 Aligned_cols=201 Identities=23% Similarity=0.320 Sum_probs=177.6
Q ss_pred hcCCCccceeccccceEEEEEEEcC-CcEEEEEEEeecc---hhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCeeEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLD-GMEVAIKVFHLQL---EGALESFNAECEVLRSI-RHRNLVRIISSCTNDDFKAL 699 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 699 (851)
.++|++.+.||+|+||+||+|++.. ++.||+|+++... ....+.+.+|.+++..+ +||+|+++++++.+.+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 4689999999999999999999854 7889999997653 23456788999999988 79999999999999999999
Q ss_pred EEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCC
Q 046438 700 VLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~ 779 (851)
||||++||+|.+++... ..+++..++.++.||+.|++|| |++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 99 v~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFL---QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 99999999999988653 4588999999999999999999 8889999999999999999999999999999864322
Q ss_pred CCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 780 ESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 780 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 175 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 224 (353)
T 2i0e_A 175 G-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224 (353)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred C-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC
Confidence 2 2344568999999999999999999999999999999999999999753
No 81
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=4.6e-34 Score=310.20 Aligned_cols=307 Identities=25% Similarity=0.395 Sum_probs=177.0
Q ss_pred CCCCCCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCcccccccCCCCCCCcEEeCCCCCCCCCCCcchhcCCccccc
Q 046438 13 LGSLSSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFPFFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQF 92 (851)
Q Consensus 13 l~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 92 (851)
+..+++|++|++++|.++. +| .+..+++|++|+|++|++++..++..+++|++|++++|.++ .++ .|..+++|++
T Consensus 40 ~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~~~~l~~L~~L~L~~n~i~-~~~--~~~~l~~L~~ 114 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKIT-DIS--ALQNLTNLRE 114 (347)
T ss_dssp HHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC-CCG--GGTTCTTCSE
T ss_pred chhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchhhhcCCcCCEEEccCCccc-Cch--HHcCCCcCCE
Confidence 3456667777777777663 33 26666777777777776666555666666666666666665 333 2556666666
Q ss_pred ccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeecccc
Q 046438 93 LSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNTL 172 (851)
Q Consensus 93 L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 172 (851)
|+|++|.+++..+ +..+++|++|++++|.....++ .+..+++|++|++++|++.+..+ +..+++|+.|++++|.+
T Consensus 115 L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 115 LYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp EECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCC
T ss_pred EECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcc
Confidence 6666666653322 5566666666666664442222 25555666666666555554322 44555555555555555
Q ss_pred ccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCCcc
Q 046438 173 SGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHEL 252 (851)
Q Consensus 173 ~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~ 252 (851)
. +..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.++..+
T Consensus 190 ~-------------------------~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~--- 237 (347)
T 4fmz_A 190 E-------------------------DISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLS--- 237 (347)
T ss_dssp C-------------------------CCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCG---
T ss_pred c-------------------------cccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCc---
Confidence 4 2222 4444555555555555554433 555566666666666665432
Q ss_pred hhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccc
Q 046438 253 SFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTL 332 (851)
Q Consensus 253 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~ 332 (851)
.+..+++|++|++++|++.+ . ..+..+++|++|++++|.+++. ..+
T Consensus 238 ----~~~~l~~L~~L~l~~n~l~~--------------------------~--~~~~~l~~L~~L~l~~n~l~~~--~~~ 283 (347)
T 4fmz_A 238 ----PLANLSQLTWLEIGTNQISD--------------------------I--NAVKDLTKLKMLNVGSNQISDI--SVL 283 (347)
T ss_dssp ----GGTTCTTCCEEECCSSCCCC--------------------------C--GGGTTCTTCCEEECCSSCCCCC--GGG
T ss_pred ----chhcCCCCCEEECCCCccCC--------------------------C--hhHhcCCCcCEEEccCCccCCC--hhh
Confidence 14455555555555554421 0 2344555666666666666543 346
Q ss_pred cCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCc
Q 046438 333 SRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELT 397 (851)
Q Consensus 333 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 397 (851)
..+++|++|++++|.+++..+..+..+++|+.|++++|++++..| +..+++|++|++++|.|+
T Consensus 284 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 284 NNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 666677777777777766666666777777777777777765544 666777777777777664
No 82
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=8.3e-35 Score=318.24 Aligned_cols=201 Identities=21% Similarity=0.341 Sum_probs=180.5
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEec
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDY 703 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 703 (851)
.++|++.+.||+|+||+||+|++. +++.||+|++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467999999999999999999885 5889999999876555567899999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC--CCcEEEeeccCccccCCCCC
Q 046438 704 MPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE--DMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 704 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~--~~~~kl~Dfg~a~~~~~~~~ 781 (851)
+++|+|.+++......+++..+..++.||+.|++|| |++||+||||||+||+++. ++.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHM---HEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 999999999877666799999999999999999999 8889999999999999974 5789999999998765432
Q ss_pred ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
......+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 206 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 253 (387)
T 1kob_A 206 -IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE 253 (387)
T ss_dssp -CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred -ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC
Confidence 223457999999999999999999999999999999999999999763
No 83
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.8e-35 Score=320.73 Aligned_cols=203 Identities=16% Similarity=0.189 Sum_probs=174.8
Q ss_pred HhcCCCccceeccccceEEEEEE------EcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcC---CCcccceeeeeecC
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGR------FLDGMEVAIKVFHLQLEGALESFNAECEVLRSIR---HRNLVRIISSCTND 694 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~ 694 (851)
..++|++.+.||+|+||+||+|+ ...++.||+|+++... ...+.+|++++++++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34679999999999999999994 3468899999997553 345777788877776 99999999999999
Q ss_pred CeeEEEEeccCCCChhHHhhc----CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC---------
Q 046438 695 DFKALVLDYMPKGSLEACLYS----DNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE--------- 761 (851)
Q Consensus 695 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~--------- 761 (851)
+..++||||+++|+|.+++.. ....+++..++.++.||++|++|| |++||+||||||+||+++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~l---H~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV---HDCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH---hhCCeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999864 356799999999999999999999 8899999999999999998
Q ss_pred --CCcEEEeeccCccccCC-CCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccCc
Q 046438 762 --DMVARLGDFGIAKLLSG-DESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFS 832 (851)
Q Consensus 762 --~~~~kl~Dfg~a~~~~~-~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 832 (851)
++.+||+|||+|+.... ..........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~ 290 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG 290 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEET
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCC
Confidence 89999999999976432 122234456799999999999999999999999999999999999999965443
No 84
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.7e-35 Score=306.36 Aligned_cols=203 Identities=25% Similarity=0.464 Sum_probs=181.4
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEecc
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYM 704 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 704 (851)
.++|++.+.||+|+||+||+|++.++..||+|+++.... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 467999999999999999999998888999999976533 3467899999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCccc
Q 046438 705 PKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMKH 784 (851)
Q Consensus 705 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 784 (851)
++++|.+++......+++..++.++.|+++|++|| |++||+||||||+||+++.++.+||+|||.+...........
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL---ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH---HHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 99999999977666789999999999999999999 888999999999999999999999999999987655444344
Q ss_pred cccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 785 TQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 785 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||+...
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 210 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT 210 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC
Confidence 44556788999999998899999999999999999999 999997543
No 85
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.1e-35 Score=314.07 Aligned_cols=213 Identities=23% Similarity=0.382 Sum_probs=179.6
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch-hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE-GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
.++|++.+.||+|+||+||+|++. +++.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999985 688999999875432 233568899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC-C
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE-S 781 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~-~ 781 (851)
|+++|+|.+++.. ...+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+++...... .
T Consensus 86 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYL---HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 9999999998854 45689999999999999999999 88999999999999999999999999999997653222 1
Q ss_pred ccccccccCccccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCccCcCccchhhhc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQI-STEGDVYSFGIMLMEIFTRKRPTDEIFSGEMSLKRWV 841 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 841 (851)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||............|.
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~ 222 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh
Confidence 22334679999999999987775 7789999999999999999999987655444444443
No 86
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=6.2e-34 Score=309.17 Aligned_cols=308 Identities=25% Similarity=0.343 Sum_probs=235.3
Q ss_pred cccCCCcCcEEEeeccccccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCC
Q 046438 155 TLFNISTLKILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRN 234 (851)
Q Consensus 155 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~ 234 (851)
.+..+++|+.|++++|.+. .++. +..+++|++|++++|++++..+ +.++++|++|++++|.++.+ ..|.++++
T Consensus 39 ~~~~l~~L~~L~l~~~~i~-~~~~--~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~ 111 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVA-SIQG--IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTN 111 (347)
T ss_dssp CHHHHTTCSEEECCSSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTT
T ss_pred cchhcccccEEEEeCCccc-cchh--hhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCc
Confidence 3456778888888888886 3332 4467788888888887775444 67777777777777777764 35777777
Q ss_pred cceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCC
Q 046438 235 LKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINL 314 (851)
Q Consensus 235 L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L 314 (851)
|++|++++|.++..+ .+..+++|+.|++++|... .. +..+..+++|
T Consensus 112 L~~L~l~~n~i~~~~-------~~~~l~~L~~L~l~~n~~~--------------------------~~-~~~~~~l~~L 157 (347)
T 4fmz_A 112 LRELYLNEDNISDIS-------PLANLTKMYSLNLGANHNL--------------------------SD-LSPLSNMTGL 157 (347)
T ss_dssp CSEEECTTSCCCCCG-------GGTTCTTCCEEECTTCTTC--------------------------CC-CGGGTTCTTC
T ss_pred CCEEECcCCcccCch-------hhccCCceeEEECCCCCCc--------------------------cc-ccchhhCCCC
Confidence 777777777776532 2556666666666666432 12 2337778888
Q ss_pred cEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccC
Q 046438 315 IIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASN 394 (851)
Q Consensus 315 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 394 (851)
++|++++|.+.+..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|
T Consensus 158 ~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n 231 (347)
T 4fmz_A 158 NYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNN 231 (347)
T ss_dssp CEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred cEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCC
Confidence 888888888875544 7788888888888888876443 7788888888888888885544 778888889999999
Q ss_pred cCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCccc
Q 046438 395 ELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNS 474 (851)
Q Consensus 395 ~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 474 (851)
+++.++. +..+++|+.|++++|.+++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++..|..
T Consensus 232 ~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~ 306 (347)
T 4fmz_A 232 KITDLSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEV 306 (347)
T ss_dssp CCCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHH
T ss_pred ccCCCcc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhH
Confidence 8888876 78888999999999988853 4678888999999999988853 45888899999999999998888888
Q ss_pred ccCCCCCCEEECCCCcccccCCccccccccccceeccCcccc
Q 046438 475 IGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLE 516 (851)
Q Consensus 475 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~ 516 (851)
++.+++|++|+|++|++++..| +..+++|+.|++++|+++
T Consensus 307 l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 307 IGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 9999999999999999997666 888999999999999875
No 87
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=7.3e-35 Score=310.09 Aligned_cols=203 Identities=31% Similarity=0.545 Sum_probs=169.4
Q ss_pred HhcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
..++|++.+.||+|+||+||+|++ .|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 356799999999999999999987 78899999987553 334567889999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCC--CcCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCEEECCCCcEEEeeccCccccC
Q 046438 702 DYMPKGSLEACLYSDNS--NLDIFKRLNIVIDIALALEYLHFGHPNP--VVHCDIKPSNVLLDEDMVARLGDFGIAKLLS 777 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~L~~~h~~~--ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~ 777 (851)
||+++|+|.+++..... .+++..++.++.||++|++|| |++| |+||||||+||+++.++.+||+|||+++...
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL---HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHH---HTSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH---HcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 99999999999865432 388999999999999999999 8888 9999999999999999999999999997643
Q ss_pred CCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 778 GDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 778 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 191 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~ 243 (309)
T 3p86_A 191 ST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN 243 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred cc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 32 222334678999999999999999999999999999999999999997643
No 88
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=8.1e-35 Score=314.54 Aligned_cols=197 Identities=25% Similarity=0.338 Sum_probs=177.1
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
++|++.+.||+|+||+||+|++. +|+.||+|+++... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57999999999999999999985 68999999997543 234567889999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
||+++|+|.+++... ..+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp ECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence 999999999998654 4588999999999999999999 8899999999999999999999999999999876432
Q ss_pred ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 195 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 241 (350)
T 1rdq_E 195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241 (350)
T ss_dssp --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred --cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC
Confidence 23467999999999999999999999999999999999999999753
No 89
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=9.2e-35 Score=317.32 Aligned_cols=204 Identities=27% Similarity=0.513 Sum_probs=176.8
Q ss_pred hcCCCccceeccccceEEEEEEEc--------CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhc-CCCcccceeeeeecC
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL--------DGMEVAIKVFHLQL-EGALESFNAECEVLRSI-RHRNLVRIISSCTND 694 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 694 (851)
.++|++.+.||+|+||+||+|++. ++..||+|+++... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467999999999999999999873 34579999997553 33456799999999999 899999999999999
Q ss_pred CeeEEEEeccCCCChhHHhhcCC---------------CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE
Q 046438 695 DFKALVLDYMPKGSLEACLYSDN---------------SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL 759 (851)
Q Consensus 695 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill 759 (851)
+..++||||+++|+|.+++.... ..+++..+..++.||+.|++|| |++||+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCeeccccchhhEEE
Confidence 99999999999999999987643 3478899999999999999999 88899999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCC-ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 760 DEDMVARLGDFGIAKLLSGDES-MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 760 ~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+..
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~ 310 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 310 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 9999999999999986644322 12233467889999999999999999999999999999999 999997643
No 90
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.4e-34 Score=314.60 Aligned_cols=201 Identities=25% Similarity=0.437 Sum_probs=176.9
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
..++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3567999999999999999999985 58999999997543 33456789999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCC---CcEEEeeccCccccC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDED---MVARLGDFGIAKLLS 777 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~---~~~kl~Dfg~a~~~~ 777 (851)
|||+++|+|.+.+.. ...+++..+..++.||++|++|| |++||+||||||+||+++.+ +.+||+|||++....
T Consensus 107 ~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 107 FDLVTGGELFEDIVA-REFYSEADASHCIQQILESIAYC---HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp ECCCCSCBHHHHHTT-CSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred EecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 999999999988854 35688999999999999999999 88899999999999999765 459999999998765
Q ss_pred CCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 778 GDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 778 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 183 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~ 233 (362)
T 2bdw_A 183 DSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 233 (362)
T ss_dssp TCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 332 233467999999999999999999999999999999999999999653
No 91
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.4e-34 Score=313.92 Aligned_cols=201 Identities=23% Similarity=0.359 Sum_probs=175.5
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch-----hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE-----GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKA 698 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 698 (851)
.++|++.+.||+|+||+||+|++. +++.||+|+++.... ...+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 357999999999999999999884 589999999975321 13567899999999999999999999999999999
Q ss_pred EEEeccCCCChhHHhhc---CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCc---EEEeeccC
Q 046438 699 LVLDYMPKGSLEACLYS---DNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMV---ARLGDFGI 772 (851)
Q Consensus 699 lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~---~kl~Dfg~ 772 (851)
+||||+++++|.+.+.. ....+++..+..++.||++|++|| |++||+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC---HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999887754 234588999999999999999999 8889999999999999976554 99999999
Q ss_pred ccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 773 AKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 773 a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
+........ ......||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 180 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (351)
T 3c0i_A 180 AIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG 235 (351)
T ss_dssp CEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred eeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCC
Confidence 987654322 23346799999999999999999999999999999999999999976
No 92
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=7.5e-35 Score=307.35 Aligned_cols=200 Identities=24% Similarity=0.402 Sum_probs=172.5
Q ss_pred cCCCccceeccccceEEEEEEEcCCcEEEEEEEeecch--hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEec
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLE--GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDY 703 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 703 (851)
++|++.+.||+|+||+||+|++.+|+.||+|+++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57999999999999999999997899999999975432 2346788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCcc
Q 046438 704 MPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMK 783 (851)
Q Consensus 704 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 783 (851)
+++ ++.+++......+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||+++....... .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC---HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-K 156 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-c
Confidence 975 88888877667789999999999999999999 888999999999999999999999999999986643221 2
Q ss_pred ccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 784 HTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 784 ~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV 204 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 334578999999999876 45899999999999999999999999764
No 93
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-34 Score=311.33 Aligned_cols=198 Identities=25% Similarity=0.427 Sum_probs=174.2
Q ss_pred cCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
++|++.+.||+|+||+||+|++ .+++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 6799999999999999999998 568999999997543 122357899999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
||+ +|++.+++... ..+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 89 E~~-~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~- 162 (336)
T 3h4j_B 89 EYA-GGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYC---HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN- 162 (336)
T ss_dssp CCC-CEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHH---HHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB-
T ss_pred ECC-CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc-
Confidence 999 67888877553 4688999999999999999999 78899999999999999999999999999998764332
Q ss_pred ccccccccCccccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQI-STEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.....+||+.|+|||++.+..+ ++++||||+||++|||++|+.||++.
T Consensus 163 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~ 211 (336)
T 3h4j_B 163 -FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211 (336)
T ss_dssp -TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCS
T ss_pred -ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCc
Confidence 2344679999999999988776 78999999999999999999999764
No 94
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.9e-34 Score=320.85 Aligned_cols=202 Identities=23% Similarity=0.367 Sum_probs=176.6
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
..++|++.+.||+|+||+||+|++. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4568999999999999999999884 68899999997643 23456789999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEEC---CCCcEEEeeccCccccC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLD---EDMVARLGDFGIAKLLS 777 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~---~~~~~kl~Dfg~a~~~~ 777 (851)
|||+++|+|.+.+... ..+++..+..++.||++|++|| |++||+||||||+||+++ .++.+||+|||++....
T Consensus 89 ~E~~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~l---H~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR-EYYSEADASHCIQQILEAVLHC---HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 9999999999888654 5689999999999999999999 888999999999999998 56889999999998765
Q ss_pred CCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 778 GDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 778 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.
T Consensus 165 ~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~ 216 (444)
T 3soa_A 165 GEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE 216 (444)
T ss_dssp TTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc
Confidence 4322 234567999999999999999999999999999999999999999653
No 95
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=8.4e-35 Score=312.43 Aligned_cols=201 Identities=25% Similarity=0.372 Sum_probs=167.3
Q ss_pred hcCCCccceeccccceEEEEEEE----cCCcEEEEEEEeecc----hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF----LDGMEVAIKVFHLQL----EGALESFNAECEVLRSIRHRNLVRIISSCTNDDF 696 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 696 (851)
.++|++.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|++++++++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36799999999999999999988 368899999997642 2234567889999999999999999999999999
Q ss_pred eEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCcccc
Q 046438 697 KALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
.++||||+++++|.+++... ..+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHL---HQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHH---HhCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 99999999999999988653 4578889999999999999999 8889999999999999999999999999999764
Q ss_pred CCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 777 SGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 777 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 172 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 224 (327)
T 3a62_A 172 IHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE 224 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC
Confidence 32222 233457999999999999999999999999999999999999999763
No 96
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=9.3e-35 Score=311.79 Aligned_cols=202 Identities=28% Similarity=0.513 Sum_probs=175.1
Q ss_pred cCCCccceeccccceEEEEEEEc----CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL----DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
++|++.+.||+|+||+||+|++. .+..||||+++... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 56899999999999999999984 34569999997643 33456799999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||+++|+|.+++......+++..+..++.|++.|++|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 999999999999977777899999999999999999999 88899999999999999999999999999998765432
Q ss_pred Cc--cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 781 SM--KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 781 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
.. ......+|+.|+|||++.+..++.++||||+||++|||++ |+.||...
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~ 258 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM 258 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC
Confidence 21 2223346778999999998899999999999999999999 99999664
No 97
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-34 Score=308.95 Aligned_cols=200 Identities=23% Similarity=0.367 Sum_probs=177.3
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchh------hHHHHHHHHHHHhhcCCCcccceeeeeecCCee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEG------ALESFNAECEVLRSIRHRNLVRIISSCTNDDFK 697 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 697 (851)
.+.|++.+.||+|+||.||+|++. +|+.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356999999999999999999985 5899999999764321 356799999999999999999999999999999
Q ss_pred EEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCC----cEEEeeccCc
Q 046438 698 ALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDM----VARLGDFGIA 773 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~----~~kl~Dfg~a 773 (851)
++||||+++++|.+++.. ...+++..+..++.||+.|++|| |++||+||||||+||+++.++ .+||+|||++
T Consensus 90 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGVYYL---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEECCCSCBHHHHHTT-SSCCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHH---HHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 999999999999999854 45689999999999999999999 888999999999999999887 8999999999
Q ss_pred cccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 774 KLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 774 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
+...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 166 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 220 (326)
T 2y0a_A 166 HKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220 (326)
T ss_dssp EECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred eECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 8764332 233457999999999999999999999999999999999999999753
No 98
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=7.5e-35 Score=306.69 Aligned_cols=202 Identities=24% Similarity=0.472 Sum_probs=177.3
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEecc
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYM 704 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 704 (851)
.++|++.+.||+|+||+||+|++.++..||+|+++.... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 467999999999999999999998888999999976532 3367899999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCccc
Q 046438 705 PKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMKH 784 (851)
Q Consensus 705 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 784 (851)
++++|.+++......+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||+++..........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (283)
T 3gen_A 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178 (283)
T ss_dssp TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence 99999999977666799999999999999999999 888999999999999999999999999999987654333333
Q ss_pred cccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 785 TQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 785 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||...
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~ 225 (283)
T 3gen_A 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 225 (283)
T ss_dssp TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 34456788999999998899999999999999999998 99999764
No 99
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=7.8e-35 Score=316.77 Aligned_cols=200 Identities=29% Similarity=0.345 Sum_probs=167.7
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch---hhHHHHHHHHHH-HhhcCCCcccceeeeeecCCeeEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE---GALESFNAECEV-LRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
++|++.+.||+|+||+||+|++. +++.||+|+++.... .....+.+|..+ ++.++||||+++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 57999999999999999999985 588899999976532 233456667766 5778999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||++||+|.+++... ..+++..++.++.||+.|++|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 118 ~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 118 LDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYL---HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 9999999999988653 4678889999999999999999 88899999999999999999999999999998643222
Q ss_pred CccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 781 SMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 781 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
......+||+.|+|||++.+..++.++|+||+||++|||++|+.||...
T Consensus 194 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 242 (373)
T 2r5t_A 194 -STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 242 (373)
T ss_dssp -CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred -CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 2344568999999999999999999999999999999999999999753
No 100
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.9e-34 Score=326.52 Aligned_cols=202 Identities=25% Similarity=0.384 Sum_probs=179.1
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
.++|++.+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 357999999999999999999985 68999999997542 22346688999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCC-CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCC
Q 046438 701 LDYMPKGSLEACLYSDN-SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~ 779 (851)
|||++||+|.+++.... ..+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yL---H~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL---HRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999886543 4589999999999999999999 8889999999999999999999999999999876433
Q ss_pred CCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 780 ESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 780 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
. .....+||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 340 ~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~ 389 (576)
T 2acx_A 340 Q--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389 (576)
T ss_dssp C--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSS
T ss_pred c--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence 2 2334589999999999999899999999999999999999999998643
No 101
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.3e-34 Score=304.33 Aligned_cols=199 Identities=25% Similarity=0.387 Sum_probs=172.8
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
++|++.+.||+|+||+||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57999999999999999999985 58899999997543 2334678899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCc
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESM 782 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 782 (851)
|+++ ++.+.+......+++..+..++.|++.|++|| |++||+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~l---H~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC---HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR- 156 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-
Confidence 9976 55556656667799999999999999999999 888999999999999999999999999999987643322
Q ss_pred cccccccCccccCccccccCC-CCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 783 KHTQTLATIGYMAPEYGREGQ-ISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 783 ~~~~~~~t~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
......+|+.|+|||++.+.. ++.++||||+||++|||++|..||..
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~ 204 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcC
Confidence 334457899999999987765 89999999999999999998888643
No 102
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.6e-34 Score=331.94 Aligned_cols=311 Identities=20% Similarity=0.206 Sum_probs=164.5
Q ss_pred CcccccccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEE
Q 046438 87 LPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQ 166 (851)
Q Consensus 87 l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 166 (851)
+++++.|++++|.++...+..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+.+..|..|.++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 34555566666655554444555556666666666666555555555666666666666665555555555555555555
Q ss_pred eeccccccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCcccc
Q 046438 167 LTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYIT 246 (851)
Q Consensus 167 L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~ 246 (851)
|++|.++ .++. ..|.++++|+.|+|++|.++++.|..|+++++|++|+|++|.++
T Consensus 130 L~~n~l~-~l~~------------------------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 130 LERNDLS-SLPR------------------------GIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp CCSSCCC-CCCT------------------------TTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred eeCCCCC-CCCH------------------------HHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC
Confidence 5555554 3333 33444555555555555555555555666666666666666655
Q ss_pred CCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCC
Q 046438 247 SSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNG 326 (851)
Q Consensus 247 ~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~ 326 (851)
..+ +..+++|+.|++++|.+... ...++|+.|++++|.+..
T Consensus 185 ~~~--------~~~l~~L~~L~l~~n~l~~l-------------------------------~~~~~L~~L~ls~n~l~~ 225 (597)
T 3oja_B 185 HVD--------LSLIPSLFHANVSYNLLSTL-------------------------------AIPIAVEELDASHNSINV 225 (597)
T ss_dssp BCC--------GGGCTTCSEEECCSSCCSEE-------------------------------ECCTTCSEEECCSSCCCE
T ss_pred CcC--------hhhhhhhhhhhcccCccccc-------------------------------cCCchhheeeccCCcccc
Confidence 432 23344555555555544211 111234444444444432
Q ss_pred CcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccCchhhccc
Q 046438 327 SIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPSTFWNL 406 (851)
Q Consensus 327 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l 406 (851)
..+.. .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+.+..|..|..+++|+.|+|++|+++.+|..+..+
T Consensus 226 ~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l 300 (597)
T 3oja_B 226 VRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPI 300 (597)
T ss_dssp EECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCC
T ss_pred ccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccC
Confidence 21111 1345555555555553 234455555555555555555555555555555555555555555544444444
Q ss_pred CcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEEC
Q 046438 407 TNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDL 486 (851)
Q Consensus 407 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 486 (851)
++|+.|+|++| .++ .+|..+..+++|+.|+|++|++++. | +..+++|+.|+|
T Consensus 301 ~~L~~L~Ls~N------------------------~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l 352 (597)
T 3oja_B 301 PTLKVLDLSHN------------------------HLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTL 352 (597)
T ss_dssp TTCCEEECCSS------------------------CCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEEC
T ss_pred CCCcEEECCCC------------------------CCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEe
Confidence 44444444444 444 3444455556666666666666532 2 556677777777
Q ss_pred CCCccccc
Q 046438 487 SNNILSGI 494 (851)
Q Consensus 487 s~N~l~~~ 494 (851)
++|++++.
T Consensus 353 ~~N~~~~~ 360 (597)
T 3oja_B 353 SHNDWDCN 360 (597)
T ss_dssp CSSCEEHH
T ss_pred eCCCCCCh
Confidence 77777754
No 103
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.4e-34 Score=311.70 Aligned_cols=201 Identities=22% Similarity=0.321 Sum_probs=177.4
Q ss_pred hcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecchhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCeeEEEEe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLEGALESFNAECEVLRSI-RHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 702 (851)
.++|++.+.||+|+||+||+|++ .+++.||+|++..... .+.+.+|+++++++ +||||+++++++.+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 46799999999999999999998 4689999999875432 24688999999999 99999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCc-----EEEeeccCccccC
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMV-----ARLGDFGIAKLLS 777 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~-----~kl~Dfg~a~~~~ 777 (851)
|+ +++|.+++......+++..+..++.|+++|++|| |++||+||||||+||+++.++. +||+|||+|+...
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYV---HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 9999999987667899999999999999999999 7889999999999999998887 9999999998764
Q ss_pred CCCCc------cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 778 GDESM------KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 778 ~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~ 221 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK 221 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc
Confidence 33221 1235679999999999999999999999999999999999999998753
No 104
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.2e-34 Score=324.26 Aligned_cols=201 Identities=25% Similarity=0.373 Sum_probs=178.7
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch---hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE---GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
++|++.+.||+|+||+||+|++. +|+.||+|+++.... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 57899999999999999999985 589999999975432 23467889999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcC---CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCC
Q 046438 702 DYMPKGSLEACLYSD---NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSG 778 (851)
Q Consensus 702 e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~ 778 (851)
||++||+|.+++... ...+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~L---H~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL---HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHH---HHcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 999999999988653 34689999999999999999999 888999999999999999999999999999987654
Q ss_pred CCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 779 DESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 779 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 342 ~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 342 GQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp TCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred CCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 322 233458999999999999999999999999999999999999999764
No 105
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2e-34 Score=312.09 Aligned_cols=201 Identities=26% Similarity=0.368 Sum_probs=161.9
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
..++|++.+.||+|+||+||+|++. +++.||+|+++... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 3567999999999999999999985 47889999997653 33668899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC---CCcEEEeeccCccccCCC
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE---DMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~---~~~~kl~Dfg~a~~~~~~ 779 (851)
|+++|+|.+++.. ...+++..+..++.||++|++|| |++||+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 129 LVTGGELFDRIVE-KGYYSERDAADAVKQILEAVAYL---HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCSCBHHHHHTT-CSSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred eCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 9999999998864 35688999999999999999999 8889999999999999975 889999999999865432
Q ss_pred CCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccCc
Q 046438 780 ESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFS 832 (851)
Q Consensus 780 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 832 (851)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 205 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 255 (349)
T 2w4o_A 205 V--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG 255 (349)
T ss_dssp ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC
T ss_pred c--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc
Confidence 2 22345789999999999999999999999999999999999999976443
No 106
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=308.06 Aligned_cols=201 Identities=27% Similarity=0.440 Sum_probs=174.6
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCC--eeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDD--FKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv 700 (851)
.++|++.+.||+|+||+||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.. ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 367999999999999999999985 48999999997543 234567889999999999999999999987755 77999
Q ss_pred EeccCCCChhHHhhcCC--CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE----CCCCcEEEeeccCcc
Q 046438 701 LDYMPKGSLEACLYSDN--SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL----DEDMVARLGDFGIAK 774 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill----~~~~~~kl~Dfg~a~ 774 (851)
|||+++++|.+++.... ..+++..++.++.||++|++|| |++||+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999987643 3389999999999999999999 88899999999999999 788889999999998
Q ss_pred ccCCCCCccccccccCccccCccccc--------cCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 775 LLSGDESMKHTQTLATIGYMAPEYGR--------EGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 775 ~~~~~~~~~~~~~~~t~~y~aPE~~~--------~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
...... ......+|+.|+|||++. +..++.++||||+||++|||++|+.||...
T Consensus 165 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 226 (319)
T 4euu_A 165 ELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (319)
T ss_dssp ECCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECT
T ss_pred ecCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 765433 233457999999999876 578899999999999999999999999753
No 107
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=314.33 Aligned_cols=195 Identities=23% Similarity=0.380 Sum_probs=170.3
Q ss_pred cceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEeccCCCCh
Q 046438 631 NNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYMPKGSL 709 (851)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 709 (851)
.+.||+|+||.||+|++. +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 568999999999999884 5899999999876656667899999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE--CCCCcEEEeeccCccccCCCCCcccccc
Q 046438 710 EACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL--DEDMVARLGDFGIAKLLSGDESMKHTQT 787 (851)
Q Consensus 710 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 787 (851)
.+++......+++..+..++.||++|++|| |++||+||||||+||++ +.++.+||+|||+++...... .....
T Consensus 174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~~~~ 248 (373)
T 2x4f_A 174 FDRIIDESYNLTELDTILFMKQICEGIRHM---HQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KLKVN 248 (373)
T ss_dssp HHHHHHTGGGCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BCCCC
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--ccccc
Confidence 998877666789999999999999999999 88899999999999999 667899999999998765432 22345
Q ss_pred ccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 788 LATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 788 ~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 291 (373)
T 2x4f_A 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD 291 (373)
T ss_dssp CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 6999999999999889999999999999999999999999764
No 108
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2e-34 Score=309.07 Aligned_cols=200 Identities=27% Similarity=0.384 Sum_probs=170.8
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCC----eeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDD----FKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv 700 (851)
.++|++.+.||+|+||+||+|++ .++.||||+++.... ......+|+.++++++||||+++++++.+.. ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEE-CCCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 36799999999999999999988 478999999975532 3345667889999999999999999998754 46999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCC----------CcEecCCCCCCEEECCCCcEEEeec
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPN----------PVVHCDIKPSNVLLDEDMVARLGDF 770 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~----------~ivH~Dl~~~Nill~~~~~~kl~Df 770 (851)
|||+++|+|.+++... .+++..+..++.|+++|++|| |+. ||+||||||+||+++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~L---H~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYL---HEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHH---TCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHH---HhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 9999999999998653 489999999999999999999 777 9999999999999999999999999
Q ss_pred cCccccCCCCCc-cccccccCccccCcccccc-----CCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 771 GIAKLLSGDESM-KHTQTLATIGYMAPEYGRE-----GQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 771 g~a~~~~~~~~~-~~~~~~~t~~y~aPE~~~~-----~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
|+|+........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 242 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPV 242 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCC
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCc
Confidence 999876543321 2333578999999999876 355678899999999999999999997643
No 109
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.8e-34 Score=315.16 Aligned_cols=202 Identities=26% Similarity=0.524 Sum_probs=165.9
Q ss_pred cCCCccceeccccceEEEEEEEc----CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL----DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
++|++.+.||+|+||.||+|++. ++..||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57999999999999999999875 46779999997643 33456799999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||+++|+|.+++......+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 999999999999987777899999999999999999999 78899999999999999999999999999998764332
Q ss_pred Cc--cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 781 SM--KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 781 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
.. ......+++.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~ 254 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence 21 1112245678999999999999999999999999999998 99999654
No 110
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.1e-34 Score=306.86 Aligned_cols=201 Identities=26% Similarity=0.436 Sum_probs=160.5
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch-hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE-GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
.++|++.+.||+|+||+||+|++. +|+.||+|+++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467999999999999999999874 589999999976532 234678899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcC-----CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccC
Q 046438 703 YMPKGSLEACLYSD-----NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLS 777 (851)
Q Consensus 703 ~~~~g~L~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~ 777 (851)
|++ |+|.+++... ...+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~l---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC---HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 5888887542 24588899999999999999999 88899999999999999999999999999998764
Q ss_pred CCCCccccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 778 GDESMKHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 778 ~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 212 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT 212 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 3222 2334578999999999876 46899999999999999999999999754
No 111
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.8e-34 Score=302.84 Aligned_cols=199 Identities=27% Similarity=0.428 Sum_probs=168.3
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch--------------------------hhHHHHHHHHHHHh
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE--------------------------GALESFNAECEVLR 677 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~ 677 (851)
.++|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 367999999999999999999884 588999999875421 11356889999999
Q ss_pred hcCCCcccceeeeeec--CCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCC
Q 046438 678 SIRHRNLVRIISSCTN--DDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPS 755 (851)
Q Consensus 678 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~ 755 (851)
+++||||+++++++.+ .+..++||||+++++|.++. ....+++..+..++.||++|++|| |++||+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP--TLKPLSEDQARFYFQDLIKGIEYL---HYQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS--CSSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh--hcCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHH
Confidence 9999999999999986 56889999999999998765 345689999999999999999999 8889999999999
Q ss_pred CEEECCCCcEEEeeccCccccCCCCCccccccccCccccCccccccCC---CCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 756 NVLLDEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQ---ISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 756 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
||+++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||..
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred HEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 99999999999999999987654322 233457999999999997765 47789999999999999999999975
No 112
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=7.7e-35 Score=310.85 Aligned_cols=203 Identities=23% Similarity=0.454 Sum_probs=168.7
Q ss_pred hcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCe----
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDF---- 696 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---- 696 (851)
.++|++.+.||+|+||.||+|++ .+++.||+|+++... ......+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46899999999999999999998 568899999997643 2334578899999999999999999999876543
Q ss_pred eEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCcccc
Q 046438 697 KALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
.++||||+++++|.+++... ..+++..++.++.|+++|++|| |++||+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFS---HQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 49999999999999998654 4688999999999999999999 8889999999999999999999999999999866
Q ss_pred CCCCC--ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 777 SGDES--MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 777 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 223 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 43221 12233568999999999999999999999999999999999999997643
No 113
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.9e-34 Score=305.50 Aligned_cols=202 Identities=31% Similarity=0.530 Sum_probs=173.6
Q ss_pred hcCCCccceeccccceEEEEEEE-----cCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecC--Cee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-----LDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTND--DFK 697 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 697 (851)
.++|++.+.||+|+||+||+|++ .+++.||+|+++.......+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46799999999999999999985 25889999999877666667899999999999999999999998653 468
Q ss_pred EEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccC
Q 046438 698 ALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLS 777 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~ 777 (851)
++||||+++|+|.+++......+++..+..++.|++.|++|| |++||+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 999999999999999987766799999999999999999999 78899999999999999999999999999998764
Q ss_pred CCCC--ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 778 GDES--MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 778 ~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
.... .......+++.|+|||++.+..++.++||||+||++|||++|..||..
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~ 219 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC
Confidence 3322 122234577889999999999999999999999999999999999864
No 114
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.6e-34 Score=299.84 Aligned_cols=201 Identities=28% Similarity=0.476 Sum_probs=179.6
Q ss_pred cCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEeccC
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYMP 705 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 705 (851)
++|++.+.||+|+||.||+|++.+++.||+|+++.... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 57899999999999999999998888999999976533 33678999999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCcccc
Q 046438 706 KGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMKHT 785 (851)
Q Consensus 706 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 785 (851)
+++|.+++......+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||++............
T Consensus 87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 9999999987777789999999999999999999 8889999999999999999999999999999876433222233
Q ss_pred ccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 786 QTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 786 ~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
...+++.|+|||+..+..++.++||||+|+++|||++ |+.||...
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 209 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 209 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC
Confidence 4457889999999998899999999999999999999 99999764
No 115
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1e-33 Score=312.20 Aligned_cols=205 Identities=19% Similarity=0.293 Sum_probs=178.1
Q ss_pred hcCCCccceeccc--cceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEE
Q 046438 625 TDQFNVNNLIGSG--SFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKAL 699 (851)
Q Consensus 625 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 699 (851)
.++|++.+.||+| +||+||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999985 68999999997654 3345678899999999999999999999999999999
Q ss_pred EEeccCCCChhHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCC
Q 046438 700 VLDYMPKGSLEACLYSD-NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSG 778 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~ 778 (851)
||||+++|+|.+++... ...+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYI---HHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999998764 35689999999999999999999 888999999999999999999999999998865422
Q ss_pred CCC------ccccccccCccccCcccccc--CCCCcchhhHHHHHHHHHHHhCCCCCCccCc
Q 046438 779 DES------MKHTQTLATIGYMAPEYGRE--GQISTEGDVYSFGIMLMEIFTRKRPTDEIFS 832 (851)
Q Consensus 779 ~~~------~~~~~~~~t~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 832 (851)
... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+...
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 242 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA 242 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH
Confidence 111 11223478999999999987 6799999999999999999999999976443
No 116
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=7.1e-34 Score=318.07 Aligned_cols=199 Identities=27% Similarity=0.464 Sum_probs=177.1
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch---hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE---GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
++|++.+.||+|+||+||+|++. +|+.||+|+++.... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57999999999999999999985 699999999975432 23467899999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
||+++|+|.+++.. ...+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 96 E~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~- 170 (476)
T 2y94_A 96 EYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYC---HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE- 170 (476)
T ss_dssp ECCSSEEHHHHTTS-SSSCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC-
T ss_pred eCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc-
Confidence 99999999998854 45689999999999999999999 88999999999999999999999999999998764332
Q ss_pred ccccccccCccccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQI-STEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||++.
T Consensus 171 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~ 219 (476)
T 2y94_A 171 -FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219 (476)
T ss_dssp -CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred -cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC
Confidence 2345679999999999988776 68999999999999999999999763
No 117
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=9e-34 Score=297.58 Aligned_cols=202 Identities=27% Similarity=0.483 Sum_probs=158.8
Q ss_pred hcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecch---hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLE---GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
.++|++.+.||+|+||.||+|++ .+++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35799999999999999999998 4689999999975432 2346789999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||+++++|.+++......+++..++.++.|+++|++|| |++||+||||||+||+++.++.+||+|||.+.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL---HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 999999999999987667889999999999999999999 88899999999999999999999999999998764322
Q ss_pred CccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 781 SMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 781 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
. ......+++.|+|||++.+..++.++||||+|+++|||++|+.||...
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 215 (278)
T 3cok_A 167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD 215 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCC
T ss_pred C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCh
Confidence 2 223457899999999999989999999999999999999999999753
No 118
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.5e-34 Score=301.14 Aligned_cols=203 Identities=26% Similarity=0.462 Sum_probs=164.8
Q ss_pred hcCCCccceeccccceEEEEEEEcC----CcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLD----GMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKAL 699 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 699 (851)
.++|++.+.||+|+||.||+|++.. +..||+|+++... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4679999999999999999998743 4569999986543 334567899999999999999999999985 457889
Q ss_pred EEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCC
Q 046438 700 VLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~ 779 (851)
||||+++++|.+++......+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 9999999999999987767799999999999999999999 7889999999999999999999999999999876544
Q ss_pred CCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 780 ESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 780 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
.........+++.|+|||++.+..++.++||||+||++|||++ |+.||....
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~ 222 (281)
T 1mp8_A 170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222 (281)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC
Confidence 3333334457889999999998899999999999999999996 999997643
No 119
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.3e-34 Score=317.29 Aligned_cols=203 Identities=29% Similarity=0.493 Sum_probs=176.6
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch-hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE-GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
.++|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 467899999999999999999985 689999999875432 234568899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCc
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESM 782 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 782 (851)
|+++|+|.+++......+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL---ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 9999999999977666789999999999999999999 8889999999999999999999999999999865332211
Q ss_pred cc-cccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 783 KH-TQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 783 ~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
.. ....+++.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~ 319 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL 319 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 11 12235778999999998889999999999999999998 99999764
No 120
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.7e-34 Score=322.36 Aligned_cols=201 Identities=25% Similarity=0.347 Sum_probs=167.6
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
.++|++.+.||+|+||.||+|++. +|+.||+|+++... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 367999999999999999999984 58899999997542 23345678899999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCC-CCcEecCCCCCCEEECCCCcEEEeeccCccccCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHP-NPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~-~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~ 779 (851)
|||+++|+|.+++... ..+++..+..++.||+.||+|| |+ +||+||||||+||+++.++.+||+|||+|+.....
T Consensus 227 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~L---H~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYL---HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHH---HHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---hhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 9999999999888653 4688999999999999999999 76 89999999999999999999999999999764332
Q ss_pred CCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 780 ESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 780 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 303 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 352 (446)
T 4ejn_A 303 G-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 352 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred C-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC
Confidence 2 2334568999999999999999999999999999999999999999653
No 121
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.1e-33 Score=303.36 Aligned_cols=191 Identities=22% Similarity=0.345 Sum_probs=151.2
Q ss_pred ceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcC-CCcccceeeeeecCCeeEEEEeccCCCCh
Q 046438 632 NLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIR-HRNLVRIISSCTNDDFKALVLDYMPKGSL 709 (851)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g~L 709 (851)
+.||+|+||+||+|++. +++.||+|++... ....+.+|+++++.++ ||||+++++++.+....++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 78999999999999985 5899999999754 3356788999999997 99999999999999999999999999999
Q ss_pred hHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCC---cEEEeeccCccccCCCCCccccc
Q 046438 710 EACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDM---VARLGDFGIAKLLSGDESMKHTQ 786 (851)
Q Consensus 710 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~~ 786 (851)
.+++... ..+++..+..++.||+.|++|| |++||+||||||+||+++.++ .+||+|||+++....... ....
T Consensus 94 ~~~l~~~-~~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~ 168 (325)
T 3kn6_A 94 FERIKKK-KHFSETEASYIMRKLVSAVSHM---HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PLKT 168 (325)
T ss_dssp HHHHHHC-SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-cccc
Confidence 9998654 5689999999999999999999 888999999999999997665 899999999986543322 3344
Q ss_pred cccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 787 TLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 787 ~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
..+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 169 ~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 212 (325)
T 3kn6_A 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH 212 (325)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred cCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 57899999999999999999999999999999999999999763
No 122
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=6.9e-34 Score=302.38 Aligned_cols=201 Identities=32% Similarity=0.559 Sum_probs=169.8
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
.++|++.+.||+|+||+||+|++. ..+|+|+++... ....+.+.+|++++++++||||+++++++.. +..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEe
Confidence 468999999999999999999763 468999887532 3345778999999999999999999998754 56789999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCC-CC
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGD-ES 781 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~-~~ 781 (851)
|+++++|.+++......+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||+|+..... ..
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL---HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 9999999999987778899999999999999999999 8889999999999999999999999999999765321 12
Q ss_pred ccccccccCccccCccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 782 MKHTQTLATIGYMAPEYGR---EGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
.......||+.|+|||++. +..++.++||||+||++|||++|+.||....
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~ 241 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCC
Confidence 2333457999999999885 6678999999999999999999999997643
No 123
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.5e-33 Score=299.11 Aligned_cols=201 Identities=20% Similarity=0.269 Sum_probs=177.5
Q ss_pred hcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecchhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCeeEEEEe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLEGALESFNAECEVLRSI-RHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 702 (851)
.++|++.+.||+|+||+||+|++ .+++.||+|++.... ..+.+.+|+++++++ +|++++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 46799999999999999999997 568999999986543 235688899999999 79999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCc-----EEEeeccCccccC
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMV-----ARLGDFGIAKLLS 777 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~-----~kl~Dfg~a~~~~ 777 (851)
|+ +++|.+++......+++..+..++.||++|++|| |++||+||||||+||+++.++. +||+|||+++...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSI---HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 9999999987777799999999999999999999 8899999999999999987776 9999999998765
Q ss_pred CCCCc------cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 778 GDESM------KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 778 ~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 222 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 222 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhh
Confidence 43221 2334579999999999999999999999999999999999999998743
No 124
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=9.2e-34 Score=305.90 Aligned_cols=202 Identities=29% Similarity=0.442 Sum_probs=170.4
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCC-------
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDD------- 695 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------- 695 (851)
.++|++.+.||+|+||.||+|++. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 467999999999999999999985 78999999997543 335577999999999999999999999885543
Q ss_pred --------------------------------------------------eeEEEEeccCCCChhHHhhcCC--CCcCHH
Q 046438 696 --------------------------------------------------FKALVLDYMPKGSLEACLYSDN--SNLDIF 723 (851)
Q Consensus 696 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~--~~~~~~ 723 (851)
..++||||+++++|.+++.... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 3799999999999999987643 234556
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC-----------ccccccccCcc
Q 046438 724 KRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES-----------MKHTQTLATIG 792 (851)
Q Consensus 724 ~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~~~~t~~ 792 (851)
.++.++.||++|++|| |++||+||||||+||+++.++.+||+|||+++....... .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFL---HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHH---HhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 6889999999999999 888999999999999999999999999999987654321 12234579999
Q ss_pred ccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 793 YMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 793 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
|+|||++.+..++.++||||+||++|||++|..|+..
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~ 278 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME 278 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH
Confidence 9999999999999999999999999999999888643
No 125
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.7e-34 Score=309.93 Aligned_cols=200 Identities=25% Similarity=0.317 Sum_probs=165.6
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEec
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDY 703 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 703 (851)
.++|++.+.||+|+||+||+|++. +++.||+|++..... ..+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 468999999999999999999985 688999999976432 336788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCc--EEEeeccCccccCCCCC
Q 046438 704 MPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMV--ARLGDFGIAKLLSGDES 781 (851)
Q Consensus 704 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~--~kl~Dfg~a~~~~~~~~ 781 (851)
+++|+|.+++... ..+++..+..++.|++.|++|| |++||+||||||+||+++.++. +||+|||+++......
T Consensus 98 ~~~~~L~~~l~~~-~~~~~~~~~~i~~ql~~~L~~L---H~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~- 172 (361)
T 3uc3_A 98 ASGGELYERICNA-GRFSEDEARFFFQQLLSGVSYC---HSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 172 (361)
T ss_dssp CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-
Confidence 9999999988553 4689999999999999999999 8889999999999999987765 9999999997543221
Q ss_pred ccccccccCccccCccccccCCCCcc-hhhHHHHHHHHHHHhCCCCCCccC
Q 046438 782 MKHTQTLATIGYMAPEYGREGQISTE-GDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~~~~-~DvwslG~il~el~~g~~pf~~~~ 831 (851)
......||+.|+|||++.+..++.+ +||||+||++|||++|+.||....
T Consensus 173 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 222 (361)
T 3uc3_A 173 -QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC---
T ss_pred -CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCc
Confidence 2334579999999999988887666 899999999999999999997643
No 126
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.3e-33 Score=296.15 Aligned_cols=200 Identities=24% Similarity=0.337 Sum_probs=177.3
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
..++|++.+.||+|+||.||+|++. ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 3467999999999999999999985 477899999987665667889999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE---CCCCcEEEeeccCccccCCC
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL---DEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill---~~~~~~kl~Dfg~a~~~~~~ 779 (851)
|+++++|.+++... ..+++..+..++.|++.|++|| |++||+||||||+||++ +.++.+||+|||++......
T Consensus 87 ~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 87 LCTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYC---HKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred ccCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 99999999887653 4588999999999999999999 88899999999999999 78899999999999876533
Q ss_pred CCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 780 ESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 780 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
. ......+|+.|+|||++.+. ++.++||||+|+++|||++|+.||...
T Consensus 163 ~--~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~ 210 (277)
T 3f3z_A 163 K--MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAP 210 (277)
T ss_dssp S--CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred c--chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCC
Confidence 2 23345799999999988654 899999999999999999999999764
No 127
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3.2e-34 Score=313.08 Aligned_cols=214 Identities=24% Similarity=0.428 Sum_probs=180.8
Q ss_pred ccHHHHHHHhcCCCccceeccccceEEEEEEEc------CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhc-CCCcccce
Q 046438 616 FSYQELLQATDQFNVNNLIGSGSFGSVYRGRFL------DGMEVAIKVFHLQL-EGALESFNAECEVLRSI-RHRNLVRI 687 (851)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~ 687 (851)
+...++....++|++.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|+++++++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 445566667789999999999999999999852 35789999997643 33456799999999999 78999999
Q ss_pred eeeeecCC-eeEEEEeccCCCChhHHhhcCCC------------------------------------------------
Q 046438 688 ISSCTNDD-FKALVLDYMPKGSLEACLYSDNS------------------------------------------------ 718 (851)
Q Consensus 688 ~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------ 718 (851)
++++.+.+ ..++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99988765 58999999999999999875432
Q ss_pred -----------------CcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 719 -----------------NLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 719 -----------------~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
.+++..++.++.||++|++|| |++||+||||||+||+++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 188899999999999999999 888999999999999999999999999999986543322
Q ss_pred -ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccCc
Q 046438 782 -MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIFS 832 (851)
Q Consensus 782 -~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~~ 832 (851)
.......+|+.|+|||++.+..++.++||||+||++|||++ |+.||.....
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 301 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 301 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccch
Confidence 23334568899999999999999999999999999999998 9999976443
No 128
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=6.6e-34 Score=319.23 Aligned_cols=197 Identities=22% Similarity=0.295 Sum_probs=165.3
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecC------C
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTND------D 695 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 695 (851)
.++|++.+.||+|+||+||+|++. +++.||+|++.... ....+++.+|+++++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 468999999999999999999885 58899999997642 33456788999999999999999999998654 3
Q ss_pred eeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccc
Q 046438 696 FKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKL 775 (851)
Q Consensus 696 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~ 775 (851)
..++||||++++ +.+.+. ..+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+|+.
T Consensus 141 ~~~lv~E~~~~~-l~~~~~---~~l~~~~~~~~~~qil~aL~~l---H~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQ---MELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSEE-HHHHHT---SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCCC-HHHHHh---hcCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 579999999765 545443 3488899999999999999999 888999999999999999999999999999987
Q ss_pred cCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 776 LSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 776 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.... .......||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.
T Consensus 214 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~ 266 (464)
T 3ttj_A 214 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266 (464)
T ss_dssp ---C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 6432 2334568999999999999999999999999999999999999999763
No 129
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=301.06 Aligned_cols=198 Identities=25% Similarity=0.316 Sum_probs=166.2
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch--hhHHHHHHHHHHHhhc-CCCcccceeeeeecCCeeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE--GALESFNAECEVLRSI-RHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 700 (851)
.++|++.+.||+|+||+||+|++. +++.||||++..... ........|+..+.++ +||||+++++++.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 367999999999999999999986 689999999865432 2233444555555555 899999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||+ +++|.+++......+++..++.++.||+.|++|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 136 ~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHL---HSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp EECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred Eecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 9999 6788888877677799999999999999999999 78899999999999999999999999999998764322
Q ss_pred CccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 781 SMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 781 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
......||+.|+|||++.+ .++.++||||+||++|||++|..|+..
T Consensus 212 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~ 257 (311)
T 3p1a_A 212 --AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHG 257 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred --CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 2334568999999998876 789999999999999999999766643
No 130
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4.3e-33 Score=297.02 Aligned_cols=213 Identities=35% Similarity=0.567 Sum_probs=185.1
Q ss_pred ccccHHHHHHHhcCCCcc------ceeccccceEEEEEEEcCCcEEEEEEEeecc----hhhHHHHHHHHHHHhhcCCCc
Q 046438 614 RRFSYQELLQATDQFNVN------NLIGSGSFGSVYRGRFLDGMEVAIKVFHLQL----EGALESFNAECEVLRSIRHRN 683 (851)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~n 683 (851)
..++++++..+++.|... +.||+|+||+||+|++ +++.||+|++.... ....+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 568899999999888766 8999999999999987 78899999987532 234577999999999999999
Q ss_pred ccceeeeeecCCeeEEEEeccCCCChhHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC
Q 046438 684 LVRIISSCTNDDFKALVLDYMPKGSLEACLYS--DNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE 761 (851)
Q Consensus 684 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~ 761 (851)
|+++++++.+.+..++||||+++++|.+++.. ....+++..++.++.||++|++|| |++||+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL---HENHHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEcC
Confidence 99999999999999999999999999998864 245689999999999999999999 7889999999999999999
Q ss_pred CCcEEEeeccCccccCCCCC-ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 762 DMVARLGDFGIAKLLSGDES-MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 762 ~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
++.+||+|||++........ .......|++.|+|||++.+ .++.++||||+|+++|||++|+.||+...
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 238 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHR 238 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTB
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCc
Confidence 99999999999987643222 12234578999999998865 48899999999999999999999998643
No 131
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-33 Score=299.49 Aligned_cols=197 Identities=30% Similarity=0.516 Sum_probs=165.5
Q ss_pred cCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEeccC
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYMP 705 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 705 (851)
++|++.+.||+|+||+||+|++ .++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 5789999999999999999998 5788999998643 345778999999999999999999998874 4789999999
Q ss_pred CCChhHHhhcCCC--CcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCc-EEEeeccCccccCCCCCc
Q 046438 706 KGSLEACLYSDNS--NLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMV-ARLGDFGIAKLLSGDESM 782 (851)
Q Consensus 706 ~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~-~kl~Dfg~a~~~~~~~~~ 782 (851)
+|+|.+++..... .++...++.++.|+++|++|||..|.+||+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 9999999875432 4678889999999999999997655589999999999999998886 799999999765322
Q ss_pred cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 783 KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 783 ~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||+...
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 207 (307)
T 2eva_A 160 -MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG 207 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTC
T ss_pred -cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhC
Confidence 223468999999999999999999999999999999999999997643
No 132
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.3e-33 Score=311.27 Aligned_cols=201 Identities=25% Similarity=0.387 Sum_probs=162.6
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcC-CCcccceeeeeecCC--ee
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIR-HRNLVRIISSCTNDD--FK 697 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~--~~ 697 (851)
..++|++.+.||+|+||+||+|++. +|+.||+|++.... .....++.+|+.+++++. ||||+++++++..++ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999884 68999999986432 334567889999999997 999999999987544 78
Q ss_pred EEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccC
Q 046438 698 ALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLS 777 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~ 777 (851)
++||||++ ++|..++.. ..+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+|+...
T Consensus 87 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA--NILEPVHKQYVVYQLIKVIKYL---HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99999997 588888865 4688899999999999999999 88899999999999999999999999999998653
Q ss_pred CC--------------------CCccccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 778 GD--------------------ESMKHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 778 ~~--------------------~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.. ........+||++|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 21 1112334689999999999876 67899999999999999999999999763
No 133
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.8e-33 Score=301.67 Aligned_cols=200 Identities=24% Similarity=0.391 Sum_probs=177.5
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchh------hHHHHHHHHHHHhhcCCCcccceeeeeecCCee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEG------ALESFNAECEVLRSIRHRNLVRIISSCTNDDFK 697 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 697 (851)
.++|++.+.||+|+||.||+|++. +|+.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 457999999999999999999985 5899999999765321 356799999999999999999999999999999
Q ss_pred EEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCC----cEEEeeccCc
Q 046438 698 ALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDM----VARLGDFGIA 773 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~----~~kl~Dfg~a 773 (851)
++||||+++++|.+++.. ...+++..+..++.|+++|++|| |++||+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~l---H~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHT-CSCEEHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 999999999999999864 45688999999999999999999 788999999999999999887 7999999999
Q ss_pred cccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 774 KLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 774 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 221 (321)
T 2a2a_A 167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221 (321)
T ss_dssp EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred eecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC
Confidence 8765432 233457899999999999999999999999999999999999999753
No 134
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.5e-34 Score=309.28 Aligned_cols=208 Identities=27% Similarity=0.364 Sum_probs=180.7
Q ss_pred ccccHHHHHHHhcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecchhhHHHHHHHHHHHhhcC-----CCcccce
Q 046438 614 RRFSYQELLQATDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLEGALESFNAECEVLRSIR-----HRNLVRI 687 (851)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~ 687 (851)
..+++++.....++|++.+.||+|+||+||+|++ .+++.||+|+++.. ....+.+..|+++++.++ ||||+++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 3445555556678999999999999999999998 46889999999753 334466788999999996 9999999
Q ss_pred eeeeecCCeeEEEEeccCCCChhHHhhcCC-CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC-----
Q 046438 688 ISSCTNDDFKALVLDYMPKGSLEACLYSDN-SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE----- 761 (851)
Q Consensus 688 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~----- 761 (851)
++++...+..++||||+ +++|.+++.... ..+++..+..++.||+.|++|| |++||+||||||+||+++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~~ 177 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYL---RKMSLTHTDLKPENILLDDPYFEK 177 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCTTCCE
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCcccEEEccccccc
Confidence 99999999999999999 999999987643 4588999999999999999999 8889999999999999975
Q ss_pred --------------------CCcEEEeeccCccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHH
Q 046438 762 --------------------DMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIF 821 (851)
Q Consensus 762 --------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~ 821 (851)
++.+||+|||+|+..... .....||+.|+|||++.+..++.++||||+||++|||+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 253 (360)
T 3llt_A 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253 (360)
T ss_dssp EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred cccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence 789999999999865332 23457899999999999999999999999999999999
Q ss_pred hCCCCCCcc
Q 046438 822 TRKRPTDEI 830 (851)
Q Consensus 822 ~g~~pf~~~ 830 (851)
+|+.||...
T Consensus 254 ~g~~pf~~~ 262 (360)
T 3llt_A 254 TGSLLFRTH 262 (360)
T ss_dssp HSSCSCCCS
T ss_pred HCCCCCCCC
Confidence 999999753
No 135
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.4e-33 Score=299.85 Aligned_cols=204 Identities=29% Similarity=0.477 Sum_probs=168.7
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhh--cCCCcccceeeeeec----CCeeE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRS--IRHRNLVRIISSCTN----DDFKA 698 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~----~~~~~ 698 (851)
.++|++.+.||+|+||+||+|++ +++.||||++... ....+.+|.+++.. ++||||+++++++.+ ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46899999999999999999998 7899999998754 23456667777766 789999999998654 34689
Q ss_pred EEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEecCCCCCCEEECCCCcEEEeeccCc
Q 046438 699 LVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFG-----HPNPVVHCDIKPSNVLLDEDMVARLGDFGIA 773 (851)
Q Consensus 699 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~-----h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a 773 (851)
+||||+++|+|.+++. ...+++..+..++.||++|++|||.. +++||+||||||+||+++.++.+||+|||+|
T Consensus 83 lv~e~~~~g~L~~~l~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQ--LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHT--TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHh--hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 9999999999999984 35689999999999999999999411 1899999999999999999999999999999
Q ss_pred cccCCCCCc---cccccccCccccCccccccC------CCCcchhhHHHHHHHHHHHhC----------CCCCCccCcCc
Q 046438 774 KLLSGDESM---KHTQTLATIGYMAPEYGREG------QISTEGDVYSFGIMLMEIFTR----------KRPTDEIFSGE 834 (851)
Q Consensus 774 ~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~------~~~~~~DvwslG~il~el~~g----------~~pf~~~~~~~ 834 (851)
+........ ......||+.|+|||++.+. .++.++||||+||++|||++| +.||......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 765433221 12234799999999998876 455789999999999999999 88887654433
No 136
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.9e-33 Score=309.86 Aligned_cols=196 Identities=23% Similarity=0.331 Sum_probs=162.7
Q ss_pred cCCCcc-ceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhh-cCCCcccceeeeeec----CCeeE
Q 046438 626 DQFNVN-NLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRS-IRHRNLVRIISSCTN----DDFKA 698 (851)
Q Consensus 626 ~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~----~~~~~ 698 (851)
++|.+. +.||+|+||+||+|++. +++.||+|+++.. ..+.+|++++.+ .+||||+++++++.. .+..+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 567776 68999999999999985 5889999998643 456788888744 589999999998865 56789
Q ss_pred EEEeccCCCChhHHhhcCC-CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC---CCcEEEeeccCcc
Q 046438 699 LVLDYMPKGSLEACLYSDN-SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE---DMVARLGDFGIAK 774 (851)
Q Consensus 699 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~---~~~~kl~Dfg~a~ 774 (851)
+||||+++|+|.+++.... ..+++..+..++.||+.|++|| |++||+||||||+||+++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL---HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999987643 4689999999999999999999 7889999999999999987 7899999999998
Q ss_pred ccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 775 LLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 775 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
...... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 213 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 267 (400)
T 1nxk_A 213 ETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 267 (400)
T ss_dssp ECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCT
T ss_pred ccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence 764322 2345678999999999999999999999999999999999999997643
No 137
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.9e-34 Score=308.11 Aligned_cols=208 Identities=25% Similarity=0.336 Sum_probs=172.5
Q ss_pred HHHHhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc-----hhhHHHHHHHHHHHhhcCCCcccceeeeeecC
Q 046438 621 LLQATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL-----EGALESFNAECEVLRSIRHRNLVRIISSCTND 694 (851)
Q Consensus 621 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 694 (851)
+....++|++.+.||+|+||+||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 4556788999999999999999999884 58889999987542 33457799999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhHHhhcC---------------------------------------CCCcCHHHHHHHHHHHHHH
Q 046438 695 DFKALVLDYMPKGSLEACLYSD---------------------------------------NSNLDIFKRLNIVIDIALA 735 (851)
Q Consensus 695 ~~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~~~~~~~~~i~~~i~~~ 735 (851)
+..++||||+++|+|.+++... ...+++..++.++.||++|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999987421 1123566778899999999
Q ss_pred HHHHHhcCCCCcEecCCCCCCEEECCCC--cEEEeeccCccccCCC---CCccccccccCccccCcccccc--CCCCcch
Q 046438 736 LEYLHFGHPNPVVHCDIKPSNVLLDEDM--VARLGDFGIAKLLSGD---ESMKHTQTLATIGYMAPEYGRE--GQISTEG 808 (851)
Q Consensus 736 l~~L~~~h~~~ivH~Dl~~~Nill~~~~--~~kl~Dfg~a~~~~~~---~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~ 808 (851)
++|| |++||+||||||+||+++.++ .+||+|||+++..... .........+|+.|+|||++.+ ..++.++
T Consensus 181 l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYL---HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHH---HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHH---HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999 888999999999999998776 8999999999865321 1122345679999999999865 6789999
Q ss_pred hhHHHHHHHHHHHhCCCCCCccC
Q 046438 809 DVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 809 DvwslG~il~el~~g~~pf~~~~ 831 (851)
||||+||++|||++|+.||....
T Consensus 258 DiwslG~il~el~~g~~pf~~~~ 280 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVN 280 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCC
Confidence 99999999999999999997643
No 138
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.5e-33 Score=304.81 Aligned_cols=196 Identities=31% Similarity=0.425 Sum_probs=172.6
Q ss_pred cCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
+.|++.+.||+|+||+||+|++ .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588999999999999999998 468899999997542 233467889999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
||++ |++.+++......+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL---HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9997 578777766667789999999999999999999 8889999999999999999999999999999765422
Q ss_pred ccccccccCccccCccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGR---EGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
....||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~ 256 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 256 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 2457899999999874 567899999999999999999999999653
No 139
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.9e-34 Score=320.59 Aligned_cols=201 Identities=28% Similarity=0.517 Sum_probs=175.6
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEecc
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYM 704 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 704 (851)
.++|++.+.||+|+||+||+|++.++..||||+++... ...+.+.+|++++++++||||+++++++. .+..++||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 46788999999999999999999888999999997643 34578999999999999999999999986 56789999999
Q ss_pred CCCChhHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCcc
Q 046438 705 PKGSLEACLYSD-NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMK 783 (851)
Q Consensus 705 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 783 (851)
++|+|.+++... ...+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||+++.........
T Consensus 265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 341 (454)
T 1qcf_A 265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI---EQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 341 (454)
T ss_dssp TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHT
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceec
Confidence 999999998653 23578889999999999999999 88899999999999999999999999999998764332222
Q ss_pred ccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 784 HTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 784 ~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
.....+++.|+|||++....++.++|||||||++|||++ |+.||.+.
T Consensus 342 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~ 389 (454)
T 1qcf_A 342 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM 389 (454)
T ss_dssp TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 233456789999999998999999999999999999999 99999764
No 140
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-33 Score=308.98 Aligned_cols=203 Identities=29% Similarity=0.507 Sum_probs=176.7
Q ss_pred hcCCCccceeccccceEEEEEEEc--------CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhc-CCCcccceeeeeecC
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL--------DGMEVAIKVFHLQL-EGALESFNAECEVLRSI-RHRNLVRIISSCTND 694 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 694 (851)
.++|++.+.||+|+||+||+|++. .+..||+|+++... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 468999999999999999999873 23579999997653 33457789999999999 899999999999999
Q ss_pred CeeEEEEeccCCCChhHHhhcCC---------------CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE
Q 046438 695 DFKALVLDYMPKGSLEACLYSDN---------------SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL 759 (851)
Q Consensus 695 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill 759 (851)
+..++||||+++|+|.+++.... ..+++..++.++.||+.|++|| |++||+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCcceEEE
Confidence 99999999999999999987643 3589999999999999999999 88899999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCC-ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 760 DEDMVARLGDFGIAKLLSGDES-MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 760 ~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
+.++.+||+|||+|+....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~ 297 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 297 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999987643322 22233467889999999999999999999999999999999 99999764
No 141
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.9e-34 Score=306.54 Aligned_cols=202 Identities=26% Similarity=0.419 Sum_probs=169.1
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCC--CcccceeeeeecCCeeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQL--EGALESFNAECEVLRSIRH--RNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv 700 (851)
.++|++.+.||+|+||+||+|.+.+++.||+|++.... ....+.+.+|++++++++| |||+++++++.+.+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 46799999999999999999998889999999997543 3345678999999999986 9999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|| +.+++|.+++... ..+++..+..++.||++|++|| |++||+||||||+||+++ ++.+||+|||+++......
T Consensus 88 ~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~l---H~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp EC-CCSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred Ee-CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 99 4588999998654 5688999999999999999999 888999999999999997 6789999999998764332
Q ss_pred Cc-cccccccCccccCcccccc-----------CCCCcchhhHHHHHHHHHHHhCCCCCCccCc
Q 046438 781 SM-KHTQTLATIGYMAPEYGRE-----------GQISTEGDVYSFGIMLMEIFTRKRPTDEIFS 832 (851)
Q Consensus 781 ~~-~~~~~~~t~~y~aPE~~~~-----------~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 832 (851)
.. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....+
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 225 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 225 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh
Confidence 21 2334579999999999864 6789999999999999999999999976443
No 142
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.6e-33 Score=293.75 Aligned_cols=214 Identities=22% Similarity=0.378 Sum_probs=182.3
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
.++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467999999999999999999985 68999999997543 2345778999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC-C
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE-S 781 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~-~ 781 (851)
|+++++|.+++.. ...+++..+..++.|+++|++|| |++||+||||+|+||+++.++.+||+|||.+....... .
T Consensus 86 ~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYL---HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 9999999998753 45688999999999999999999 78899999999999999999999999999997653222 1
Q ss_pred ccccccccCccccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCccCcCccchhhhcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQI-STEGDVYSFGIMLMEIFTRKRPTDEIFSGEMSLKRWVN 842 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 842 (851)
.......+++.|+|||++.+..+ +.++||||+|+++|||++|+.||+...........|..
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 223 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 223 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh
Confidence 12334578999999999987765 77899999999999999999999876554444444443
No 143
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=9.5e-34 Score=307.27 Aligned_cols=204 Identities=26% Similarity=0.460 Sum_probs=176.8
Q ss_pred HhcCCCccceeccccceEEEEEEEcC------CcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCe
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFLD------GMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDF 696 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 696 (851)
..++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 45789999999999999999998853 4789999997653 3345679999999999999999999999999999
Q ss_pred eEEEEeccCCCChhHHhhcCC-----------------------CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCC
Q 046438 697 KALVLDYMPKGSLEACLYSDN-----------------------SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIK 753 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~ 753 (851)
.++||||+++|+|.+++.... ..+++..++.++.||++|++|| |++||+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCC
Confidence 999999999999999987632 5688999999999999999999 88899999999
Q ss_pred CCCEEECCCCcEEEeeccCccccCCCCC-ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 754 PSNVLLDEDMVARLGDFGIAKLLSGDES-MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 754 ~~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
|+||+++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 9999999999999999999976543221 12234567899999999998899999999999999999999 99999764
No 144
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=299.74 Aligned_cols=201 Identities=29% Similarity=0.435 Sum_probs=169.5
Q ss_pred HhcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecch-----hhHHHHHHHHHHHhhcC---CCcccceeeeeecC
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLE-----GALESFNAECEVLRSIR---HRNLVRIISSCTND 694 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~ 694 (851)
..++|++.+.||+|+||+||+|++ .+++.||+|+++.... .....+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457899999999999999999997 4688999999875431 11245667777777664 99999999998775
Q ss_pred C-----eeEEEEeccCCCChhHHhhcCC-CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEe
Q 046438 695 D-----FKALVLDYMPKGSLEACLYSDN-SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLG 768 (851)
Q Consensus 695 ~-----~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~ 768 (851)
. ..++||||++ ++|.+++.... ..+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL---HANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5789999996 59998886643 3489999999999999999999 88899999999999999999999999
Q ss_pred eccCccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 769 DFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 769 Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
|||+++...... ......+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 163 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 222 (308)
T 3g33_A 163 DFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 222 (308)
T ss_dssp SCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCS
T ss_pred eCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999998764322 234567899999999999999999999999999999999999999653
No 145
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.4e-34 Score=305.98 Aligned_cols=200 Identities=24% Similarity=0.371 Sum_probs=167.2
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchh-hHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEec
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEG-ALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDY 703 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 703 (851)
++|++.+.||+|+||+||+|++. +++.||+|+++..... ....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57999999999999999999985 6889999998754322 112455799999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCcc
Q 046438 704 MPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMK 783 (851)
Q Consensus 704 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 783 (851)
++ |++.+++......+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+++....... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYC---HRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-T 156 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-c
Confidence 97 588888877777899999999999999999999 888999999999999999999999999999976543222 2
Q ss_pred ccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 784 HTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 784 ~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS 204 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 334578999999999876 56899999999999999999999999764
No 146
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.4e-34 Score=309.81 Aligned_cols=202 Identities=20% Similarity=0.265 Sum_probs=169.1
Q ss_pred hcCCCccceeccccceEEEEEEEcC------CcEEEEEEEeecchhh-----------HHHHHHHHHHHhhcCCCcccce
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLD------GMEVAIKVFHLQLEGA-----------LESFNAECEVLRSIRHRNLVRI 687 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~~ 687 (851)
.++|++.+.||+|+||+||+|++.. ++.||+|++....... ......|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4589999999999999999998854 4789999987543211 1123345566777889999999
Q ss_pred eeeeecC----CeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEEC--C
Q 046438 688 ISSCTND----DFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLD--E 761 (851)
Q Consensus 688 ~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~--~ 761 (851)
++++.+. ...++||||+ +++|.+++......+++..+..++.||+.||+|| |++||+||||||+||+++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~l---H~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYI---HEHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeEEecCCHHHEEEecCC
Confidence 9998764 4589999999 9999999987777899999999999999999999 788999999999999998 8
Q ss_pred CCcEEEeeccCccccCCCCCc------cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 762 DMVARLGDFGIAKLLSGDESM------KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 762 ~~~~kl~Dfg~a~~~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
++.+||+|||+|+.+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~ 264 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN 264 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 899999999999766432211 113345999999999999999999999999999999999999999864
No 147
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.1e-34 Score=305.97 Aligned_cols=200 Identities=26% Similarity=0.383 Sum_probs=174.9
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch--------hhHHHHHHHHHHHhhcCCCcccceeeeeecC
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE--------GALESFNAECEVLRSIRHRNLVRIISSCTND 694 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 694 (851)
..++|++.+.||+|+||+||+|++. +++.||+|+++.... ...+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4568999999999999999999874 688999999976531 1234577899999999999999999999999
Q ss_pred CeeEEEEeccCCC-ChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCc
Q 046438 695 DFKALVLDYMPKG-SLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIA 773 (851)
Q Consensus 695 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a 773 (851)
+..++||||+.+| +|.+++.. ...+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~-~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDR-HPRLDEPLASYIFRQLVSAVGYL---RLKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHT-CCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 99888854 44689999999999999999999 8889999999999999999999999999999
Q ss_pred cccCCCCCccccccccCccccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 774 KLLSGDESMKHTQTLATIGYMAPEYGREGQI-STEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 774 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
+...... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||..
T Consensus 178 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 178 AYLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp EECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred eECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence 8765432 2334679999999999988877 7889999999999999999999975
No 148
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.6e-34 Score=308.56 Aligned_cols=201 Identities=29% Similarity=0.395 Sum_probs=173.4
Q ss_pred cCCCccceeccccceEEEEEEE----cCCcEEEEEEEeecc----hhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCe
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRF----LDGMEVAIKVFHLQL----EGALESFNAECEVLRSI-RHRNLVRIISSCTNDDF 696 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 696 (851)
++|++.+.||+|+||+||+|+. .+++.||+|+++... ....+.+.+|+++++++ +||||+++++++.+.+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5799999999999999999988 368999999986532 22345677899999999 69999999999999999
Q ss_pred eEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCcccc
Q 046438 697 KALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
.++||||+++|+|.+++... ..+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||+++..
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHL---HKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred EEEEeecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 99999999999999998654 4688999999999999999999 7889999999999999999999999999999876
Q ss_pred CCCCCccccccccCccccCcccccc--CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 777 SGDESMKHTQTLATIGYMAPEYGRE--GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 777 ~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
............||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 265 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC
Confidence 4433334445679999999999875 45789999999999999999999999753
No 149
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.7e-33 Score=293.15 Aligned_cols=201 Identities=25% Similarity=0.433 Sum_probs=176.5
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
..++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 3578999999999999999999885 58899999997643 33456788999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCc---EEEeeccCccccC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMV---ARLGDFGIAKLLS 777 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~---~kl~Dfg~a~~~~ 777 (851)
|||+++++|.+.+... ..+++..+..++.|++.|++|| |++||+||||||+||+++.++. +||+|||.+....
T Consensus 84 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYC---HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 9999999998887554 5688999999999999999999 8889999999999999976655 9999999998764
Q ss_pred CCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 778 GDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 778 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
... ......+|+.|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 160 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 210 (284)
T 3kk8_A 160 DSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210 (284)
T ss_dssp SSC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCC
Confidence 332 233467999999999999999999999999999999999999999653
No 150
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2e-33 Score=308.84 Aligned_cols=200 Identities=26% Similarity=0.423 Sum_probs=169.1
Q ss_pred cCCCccceeccccceEEEEEEEcCCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcC--CCcccceeeeeecCCeeEEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQL--EGALESFNAECEVLRSIR--HRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~ 701 (851)
.+|++.+.||+|+||+||+|++.+++.||||++.... ....+.+.+|++++++++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4599999999999999999998789999999997543 334577899999999996 599999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
| +.+++|.+++... ..+++..+..++.||++|++|| |++||+||||||+||+++ ++.+||+|||+++.......
T Consensus 136 E-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~l---H~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHH---HTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 5688999988654 4678889999999999999999 889999999999999995 58999999999987643322
Q ss_pred -ccccccccCccccCcccccc-----------CCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 782 -MKHTQTLATIGYMAPEYGRE-----------GQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 782 -~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 271 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh
Confidence 12334679999999999864 468899999999999999999999997643
No 151
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.1e-33 Score=299.99 Aligned_cols=201 Identities=25% Similarity=0.347 Sum_probs=170.1
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch--hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE--GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
++|++.+.||+|+||+||+|++. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 67999999999999999999985 489999999865432 234668899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCc
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESM 782 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 782 (851)
|++++++.+++.. ...+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||.+........
T Consensus 83 ~~~~~~l~~~~~~-~~~~~~~~~~~i~~~l~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 157 (311)
T 4agu_A 83 YCDHTVLHELDRY-QRGVPEHLVKSITWQTLQAVNFC---HKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD- 157 (311)
T ss_dssp CCSEEHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhh-hcCCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence 9999999887754 45688999999999999999999 888999999999999999999999999999987653322
Q ss_pred cccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 783 KHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 783 ~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 207 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS 207 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 2334578999999999876 678999999999999999999999997643
No 152
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.2e-34 Score=310.59 Aligned_cols=203 Identities=30% Similarity=0.463 Sum_probs=173.5
Q ss_pred hcCCCccceeccccceEEEEEEEc------CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL------DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFK 697 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 697 (851)
.++|++.+.||+|+||+||+|++. +++.||||+++... ......+.+|+.++++++||||+++++++.+....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 357899999999999999999853 46789999986542 33446788999999999999999999999999999
Q ss_pred EEEEeccCCCChhHHhhcCC------CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCC---cEEEe
Q 046438 698 ALVLDYMPKGSLEACLYSDN------SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDM---VARLG 768 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~---~~kl~ 768 (851)
++||||+++|+|.+++.... ..+++..++.++.||++|++|| |++||+||||||+||+++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999987532 4588999999999999999999 888999999999999999555 59999
Q ss_pred eccCccccCCCC-CccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 769 DFGIAKLLSGDE-SMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 769 Dfg~a~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
|||+|+...... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~ 290 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 290 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999997542221 122234567999999999999999999999999999999998 99999764
No 153
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3e-33 Score=293.69 Aligned_cols=199 Identities=27% Similarity=0.457 Sum_probs=172.7
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
.++|++.+.||+|+||+||+|++. +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467999999999999999999885 47789999986543 22346688999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||+++++|.+++... ..+++..+..++.|++.|++|| |++||+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~L---H~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~- 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS- 162 (279)
T ss_dssp ECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HTTTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc-
Confidence 9999999999988653 4588999999999999999999 8899999999999999999999999999998654322
Q ss_pred CccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 781 SMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 781 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
......+++.|+|||++.+..++.++||||+|+++|||++|+.||...
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 210 (279)
T 3fdn_A 163 --RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred --cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC
Confidence 233457899999999999999999999999999999999999999753
No 154
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.4e-33 Score=328.37 Aligned_cols=202 Identities=23% Similarity=0.318 Sum_probs=178.2
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCeeE
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSI-RHRNLVRIISSCTNDDFKA 698 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 698 (851)
..++|++.+.||+|+||+||+|++. +++.||||+++... ....+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3468999999999999999999985 57889999998542 33456788899999987 7999999999999999999
Q ss_pred EEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCC
Q 046438 699 LVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSG 778 (851)
Q Consensus 699 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~ 778 (851)
+||||+++|+|.+++... ..+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+|+....
T Consensus 419 lV~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~L---H~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFL---QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HhCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 999999999999988654 4688999999999999999999 888999999999999999999999999999986433
Q ss_pred CCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 779 DESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 779 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.. .......||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.
T Consensus 495 ~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~ 545 (674)
T 3pfq_A 495 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 545 (674)
T ss_dssp TT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC
Confidence 32 2344578999999999999999999999999999999999999999763
No 155
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=8.7e-34 Score=305.63 Aligned_cols=198 Identities=26% Similarity=0.400 Sum_probs=171.3
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCeeEEEE
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSI-RHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 701 (851)
..++|++.+.||+|+||+||+|++. +++.||+|+++.... ...+|++++.++ +||||+++++++.+.+..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4567999999999999999999985 588999999975432 245688888888 7999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCC----CcEEEeeccCccccC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDED----MVARLGDFGIAKLLS 777 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~----~~~kl~Dfg~a~~~~ 777 (851)
||+++|+|.+++.. ...+++..+..++.||+.|++|| |++||+||||||+||++..+ +.+||+|||++....
T Consensus 96 E~~~gg~L~~~i~~-~~~~~~~~~~~~~~qi~~al~~l---H~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILR-QKFFSEREASAVLFTITKTVEYL---HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHT-CTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHH---HHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 99999999998854 35689999999999999999999 88899999999999998433 359999999998764
Q ss_pred CCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 778 GDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 778 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.... ......+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 172 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 223 (342)
T 2qr7_A 172 AENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANG 223 (342)
T ss_dssp CTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred CCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCC
Confidence 4322 234567899999999998888999999999999999999999999753
No 156
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.7e-33 Score=298.54 Aligned_cols=202 Identities=26% Similarity=0.328 Sum_probs=166.6
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch---hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE---GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
.++|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999985 688999999875432 2346788999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||+++++|.+++... ..+++..+..++.|+++|++|| |++||+||||+|+||+++.++.+||+|||++.......
T Consensus 113 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAA---HAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 9999999999988653 4688999999999999999999 88899999999999999999999999999998765433
Q ss_pred CccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 781 SMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 781 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
........+++.|+|||++.+..++.++||||+|+++|||++|+.||...
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 238 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD 238 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc
Confidence 33334567899999999999999999999999999999999999999753
No 157
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=8.8e-34 Score=321.51 Aligned_cols=203 Identities=28% Similarity=0.506 Sum_probs=178.8
Q ss_pred hcCCCccceeccccceEEEEEEEcC-CcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEec
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLD-GMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDY 703 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 703 (851)
.++|++.+.||+|+||.||+|++.. +..||||+++... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 3568899999999999999999864 8899999997653 2457899999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCc
Q 046438 704 MPKGSLEACLYSD-NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESM 782 (851)
Q Consensus 704 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 782 (851)
+++|+|.+++... ...+++..+..++.||++||+|| |++||+||||||+||+++.++.+||+|||+++........
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 374 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence 9999999999763 45688999999999999999999 8889999999999999999999999999999876544333
Q ss_pred cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 783 KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 783 ~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
......+++.|+|||++....++.++|||||||++|||++ |+.||....
T Consensus 375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~ 424 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 424 (495)
T ss_dssp CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC
Confidence 3334456789999999998899999999999999999999 999997643
No 158
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=3.2e-33 Score=294.83 Aligned_cols=201 Identities=29% Similarity=0.512 Sum_probs=173.1
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchh-------hHHHHHHHHHHHhhcCCCcccceeeeeecCCe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEG-------ALESFNAECEVLRSIRHRNLVRIISSCTNDDF 696 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 696 (851)
.++|++.+.||+|+||+||+|++. +++.||+|++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 367999999999999999999984 6889999998654321 1267899999999999999999999997665
Q ss_pred eEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCEEECCCCc-----EEEee
Q 046438 697 KALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNP--VVHCDIKPSNVLLDEDMV-----ARLGD 769 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~--ivH~Dl~~~Nill~~~~~-----~kl~D 769 (851)
++||||+++|+|.+++......+++..+..++.|++.|++|| |++| |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM---QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH---HTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHH---HhCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 699999999999998887777899999999999999999999 7788 999999999999988776 99999
Q ss_pred ccCccccCCCCCccccccccCccccCcccc--ccCCCCcchhhHHHHHHHHHHHhCCCCCCccCcCc
Q 046438 770 FGIAKLLSGDESMKHTQTLATIGYMAPEYG--REGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSGE 834 (851)
Q Consensus 770 fg~a~~~~~~~~~~~~~~~~t~~y~aPE~~--~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~ 834 (851)
||+++.... ......+|+.|+|||++ ....++.++||||+||++|||++|+.||......+
T Consensus 173 fg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 235 (287)
T 4f0f_A 173 FGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235 (287)
T ss_dssp CTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH
T ss_pred CCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH
Confidence 999975432 23346789999999998 44567899999999999999999999998654433
No 159
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.2e-33 Score=303.60 Aligned_cols=202 Identities=29% Similarity=0.481 Sum_probs=168.3
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcE----EEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGME----VAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKAL 699 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 699 (851)
++|++.+.||+|+||+||+|++. +++. ||+|.++... ....+.+.+|++++++++||||+++++++.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 57999999999999999999874 3443 5788775432 234567999999999999999999999998754 678
Q ss_pred EEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCC
Q 046438 700 VLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~ 779 (851)
|+||+++|+|.+++......+++..++.++.||+.|++|| |++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 9999999999999988778899999999999999999999 7889999999999999999999999999999876433
Q ss_pred CCc-cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 780 ESM-KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 780 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||+...
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 224 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC
Confidence 321 2223456889999999999999999999999999999999 999997643
No 160
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.5e-33 Score=297.53 Aligned_cols=203 Identities=33% Similarity=0.546 Sum_probs=163.3
Q ss_pred HhcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
..++|++.+.||+|+||+||+|++. ..||+|+++... ....+.+.+|++++++++||||++++++. .....++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 3568999999999999999999753 369999987543 34457799999999999999999999965 455689999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC-
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE- 780 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~- 780 (851)
||+++++|.+++......+++..+..++.|++.|++|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~l---H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 99 QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL---HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred EecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HhCCcccccCccceEEECCCCCEEEccceeccccccccc
Confidence 99999999999977777899999999999999999999 88899999999999999999999999999997654321
Q ss_pred CccccccccCccccCccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCccCc
Q 046438 781 SMKHTQTLATIGYMAPEYGR---EGQISTEGDVYSFGIMLMEIFTRKRPTDEIFS 832 (851)
Q Consensus 781 ~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 832 (851)
........||+.|+|||++. +..++.++||||+||++|||++|+.||.....
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~ 230 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 230 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch
Confidence 22233457899999999986 56788999999999999999999999976433
No 161
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.6e-33 Score=293.54 Aligned_cols=198 Identities=25% Similarity=0.445 Sum_probs=152.3
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
++|++.+.||+|+||+||+|++. +++.||+|+++... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999874 68999999987543 223467889999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
||+ ++++.+.+... ..+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 93 e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYC---HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred hhc-CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCCeeccCChHhEEECCCCCEEEeecccceeccCcc-
Confidence 999 66777776543 5689999999999999999999 88899999999999999999999999999997654332
Q ss_pred ccccccccCccccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQI-STEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
......+|+.|+|||++.+..+ +.++||||+||++|||++|+.||...
T Consensus 167 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 215 (275)
T 2eue_A 167 -FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 215 (275)
T ss_dssp ---------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred -cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 2234568999999999987765 78999999999999999999999763
No 162
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.1e-33 Score=295.28 Aligned_cols=202 Identities=25% Similarity=0.475 Sum_probs=172.0
Q ss_pred hcCCCccceeccccceEEEEEEEcC----CcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLD----GMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKAL 699 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 699 (851)
.++|++.+.||+|+||+||+|++.. +..||+|+++... ....+.+.+|++++++++||||+++++++.+. ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 4679999999999999999998743 3359999987653 33457799999999999999999999998754 5689
Q ss_pred EEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCC
Q 046438 700 VLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~ 779 (851)
||||+++++|.+++......+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||.+......
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL---ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 9999999999999977667789999999999999999999 8889999999999999999999999999999876544
Q ss_pred CCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 780 ESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 780 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
.........+++.|+|||++.+..++.++||||+|+++|||++ |+.||...
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~ 218 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 218 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccC
Confidence 3333344567889999999998899999999999999999998 99999753
No 163
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.4e-33 Score=297.82 Aligned_cols=203 Identities=28% Similarity=0.519 Sum_probs=180.5
Q ss_pred HhcCCCccceeccccceEEEEEEEcC-CcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFLD-GMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
..++|++.+.||+|+||+||+|++.. +..||+|+++.. ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 45679999999999999999999854 888999999754 3345778999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 703 YMPKGSLEACLYSD-NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 703 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
|+++++|.+++... ...+++..+..++.|++.|++|| |++||+||||||+||+++.++.+||+|||.+........
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHH---HHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHH---HHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 99999999998763 45689999999999999999999 788999999999999999999999999999987765444
Q ss_pred ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
.......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||...
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~ 216 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216 (288)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 44444567889999999998999999999999999999999 99999764
No 164
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.1e-33 Score=305.43 Aligned_cols=209 Identities=25% Similarity=0.308 Sum_probs=173.4
Q ss_pred ccHHHHHHHhcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecch-----------hhHHHHHHHHHHHhhcCCCcc
Q 046438 616 FSYQELLQATDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLE-----------GALESFNAECEVLRSIRHRNL 684 (851)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~e~~~l~~l~h~ni 684 (851)
...+++....++|++.+.||+|+||.||+|++.+|+.||+|++..... ...+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 456778888999999999999999999999988899999999865322 123678999999999999999
Q ss_pred cceeeeeec-----CCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE
Q 046438 685 VRIISSCTN-----DDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL 759 (851)
Q Consensus 685 v~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill 759 (851)
+++++++.. ....++||||++ |++.+.+......+++..+..++.||+.|++|| |++||+||||||+||++
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVL---HEAGVVHRDLHPGNILL 167 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCcCEecCCChHHEEE
Confidence 999999843 346899999997 678888777667799999999999999999999 88899999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCCccccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 760 DEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 760 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
+.++.+||+|||+++...... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 237 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237 (362)
T ss_dssp CTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCC
Confidence 999999999999997543322 2334578999999999876 67899999999999999999999999764
No 165
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-33 Score=304.55 Aligned_cols=205 Identities=27% Similarity=0.464 Sum_probs=175.0
Q ss_pred HhcCCCccceeccccceEEEEEEEc------CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhc-CCCcccceeeeeecCC
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL------DGMEVAIKVFHLQL-EGALESFNAECEVLRSI-RHRNLVRIISSCTNDD 695 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 695 (851)
..++|++.+.||+|+||.||+|++. .+..||+|+++... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 3578999999999999999999872 35679999997543 23456799999999999 8999999999999999
Q ss_pred eeEEEEeccCCCChhHHhhcCCC----------------------CcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCC
Q 046438 696 FKALVLDYMPKGSLEACLYSDNS----------------------NLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIK 753 (851)
Q Consensus 696 ~~~lv~e~~~~g~L~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~ 753 (851)
..++||||+++|+|.+++..... .+++..++.++.||++|++|| |++||+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL---EFKSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHH---HHTTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCC
Confidence 99999999999999999876433 368889999999999999999 88899999999
Q ss_pred CCCEEECCCCcEEEeeccCccccCCCCC-ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 754 PSNVLLDEDMVARLGDFGIAKLLSGDES-MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 754 ~~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
|+||+++.++.+||+|||++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999986643322 12334567889999999998999999999999999999998 999997754
No 166
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.1e-33 Score=298.85 Aligned_cols=195 Identities=25% Similarity=0.420 Sum_probs=172.0
Q ss_pred hcCCCccceeccccceEEEEEEEcC-C-------cEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLD-G-------MEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDF 696 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 696 (851)
.++|++.+.||+|+||+||+|++.. + ..||+|++........+.+.+|++++++++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3578999999999999999998743 3 4699999987666667889999999999999999999999999999
Q ss_pred eEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCc--------EEEe
Q 046438 697 KALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMV--------ARLG 768 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~--------~kl~ 768 (851)
.++||||+++|+|.+++......+++..+..++.||++|++|| |++||+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL---EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---hhCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 9999999999999999987766689999999999999999999 8889999999999999988876 9999
Q ss_pred eccCccccCCCCCccccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCC
Q 046438 769 DFGIAKLLSGDESMKHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPT 827 (851)
Q Consensus 769 Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf 827 (851)
|||.+..... .....+++.|+|||++.+ ..++.++||||+||++|||++|..|+
T Consensus 164 Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~ 218 (289)
T 4fvq_A 164 DPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP 218 (289)
T ss_dssp CCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred cCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence 9999875532 123457889999999987 77899999999999999999955444
No 167
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.1e-33 Score=310.45 Aligned_cols=203 Identities=25% Similarity=0.358 Sum_probs=164.7
Q ss_pred HHhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch--------hhHHHHHHHHHHHhhcCCCcccceeeeeec
Q 046438 623 QATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE--------GALESFNAECEVLRSIRHRNLVRIISSCTN 693 (851)
Q Consensus 623 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 693 (851)
...++|++.+.||+|+||+||+|++. +++.||+|++..... .....+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999885 588999999975421 112347899999999999999999999864
Q ss_pred CCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCC---CcEEEeec
Q 046438 694 DDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDED---MVARLGDF 770 (851)
Q Consensus 694 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~---~~~kl~Df 770 (851)
+..++||||+++|+|.+++.. ...+++..+..++.|+++|++|| |++||+||||||+||+++.+ +.+||+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSS-SCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred -CceEEEEEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEecCCCcceEEEeec
Confidence 457899999999999988754 45689999999999999999999 78899999999999999654 45999999
Q ss_pred cCccccCCCCCccccccccCccccCcccccc---CCCCcchhhHHHHHHHHHHHhCCCCCCccCc
Q 046438 771 GIAKLLSGDESMKHTQTLATIGYMAPEYGRE---GQISTEGDVYSFGIMLMEIFTRKRPTDEIFS 832 (851)
Q Consensus 771 g~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 832 (851)
|+|+...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.....
T Consensus 287 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~ 349 (419)
T 3i6u_A 287 GHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 349 (419)
T ss_dssp STTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS
T ss_pred ccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc
Confidence 9998764322 2334679999999999853 6688899999999999999999999976433
No 168
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.2e-33 Score=300.40 Aligned_cols=204 Identities=25% Similarity=0.447 Sum_probs=177.0
Q ss_pred hcCCCccceeccccceEEEEEEEc------CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL------DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFK 697 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 697 (851)
.++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 467999999999999999999872 34789999997543 33457789999999999999999999999999999
Q ss_pred EEEEeccCCCChhHHhhcCC-----------------------CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCC
Q 046438 698 ALVLDYMPKGSLEACLYSDN-----------------------SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKP 754 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~ 754 (851)
++||||+++++|.+++.... ..+++..++.++.||++|++|| |++||+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHH---HHTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHH---HHCCCcccccch
Confidence 99999999999999987543 2478899999999999999999 788999999999
Q ss_pred CCEEECCCCcEEEeeccCccccCCCCCc-cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 755 SNVLLDEDMVARLGDFGIAKLLSGDESM-KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 755 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
+||+++.++.+||+|||+++........ ......+++.|+|||++.+..++.++||||+||++|||++ |+.||....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999876433221 2233457889999999998899999999999999999999 999997643
No 169
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.6e-33 Score=299.99 Aligned_cols=203 Identities=23% Similarity=0.352 Sum_probs=170.3
Q ss_pred hcCCCcc-ceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCeeEEEE
Q 046438 625 TDQFNVN-NLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSI-RHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 625 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 701 (851)
.+.|++. +.||+|+||+||+|++. +++.||+|+++.......+.+.+|++++.++ +||||+++++++.+.+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 4678885 78999999999999874 6899999999876555567899999999985 7999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCc---EEEeeccCccccCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMV---ARLGDFGIAKLLSG 778 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~---~kl~Dfg~a~~~~~ 778 (851)
||+++|+|.+++... ..+++..+..++.||++|++|| |++||+||||||+||+++.++. +||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 91 EKMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFL---HNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp ECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHH---HhCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 999999999998654 4688999999999999999999 7889999999999999988765 99999999876532
Q ss_pred CCC------ccccccccCccccCcccccc-----CCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 779 DES------MKHTQTLATIGYMAPEYGRE-----GQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 779 ~~~------~~~~~~~~t~~y~aPE~~~~-----~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 230 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccc
Confidence 211 11223468999999999865 568899999999999999999999997654
No 170
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.7e-33 Score=302.35 Aligned_cols=205 Identities=25% Similarity=0.481 Sum_probs=160.7
Q ss_pred HhcCCCccceeccccceEEEEEEEcCC----cEEEEEEEeec--chhhHHHHHHHHHHHhhcCCCcccceeeeeecCCee
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFLDG----MEVAIKVFHLQ--LEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFK 697 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~----~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 697 (851)
..++|++.+.||+|+||+||+|++... ..||+|+++.. .....+.+.+|++++++++||||+++++++.+....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 346799999999999999999987542 27999998764 234567899999999999999999999999876654
Q ss_pred ------EEEEeccCCCChhHHhhcC-----CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEE
Q 046438 698 ------ALVLDYMPKGSLEACLYSD-----NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVAR 766 (851)
Q Consensus 698 ------~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~k 766 (851)
++||||+++|+|.+++... ...+++..+..++.||++|++|| |++||+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L---H~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHH---HcCCcccCCCCcceEEEcCCCCEE
Confidence 8999999999999988542 22588999999999999999999 888999999999999999999999
Q ss_pred EeeccCccccCCCCC-ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 767 LGDFGIAKLLSGDES-MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 767 l~Dfg~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
|+|||+++....... .......+++.|+|||++.+..++.++||||+||++|||++ |+.||....
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 244 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE 244 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC
Confidence 999999986643322 12223456889999999999999999999999999999999 999997643
No 171
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.2e-33 Score=294.28 Aligned_cols=200 Identities=29% Similarity=0.423 Sum_probs=170.6
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch-hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE-GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
.++|++.+.||+|+||+||+|++. ++..||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 357999999999999999999984 588999999876542 345789999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhc---CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE---CCCCcEEEeeccCcccc
Q 046438 703 YMPKGSLEACLYS---DNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL---DEDMVARLGDFGIAKLL 776 (851)
Q Consensus 703 ~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill---~~~~~~kl~Dfg~a~~~ 776 (851)
|+++|+|.+++.. ....+++..+..++.|+++|++|| |++||+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF---HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 9999999988754 246789999999999999999999 88899999999999999 45688999999999765
Q ss_pred CCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 777 SGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 777 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.... ......+|+.|+|||++. ..++.++||||+||++|||++|+.||...
T Consensus 178 ~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~ 228 (285)
T 3is5_A 178 KSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT 228 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC
Confidence 4322 233457899999999875 56899999999999999999999999764
No 172
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=9.7e-33 Score=297.41 Aligned_cols=136 Identities=21% Similarity=0.234 Sum_probs=73.3
Q ss_pred CCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccCchhhcccCcceEEEecC
Q 046438 337 KLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPSTFWNLTNILMVDLSS 416 (851)
Q Consensus 337 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~ 416 (851)
+|++|++++|.+++..+..+..+++|+.|++++|++.+..+..|..+++|++|++++|+++.+|..+..+++|+.|++++
T Consensus 194 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~ 273 (332)
T 2ft3_A 194 TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHT 273 (332)
T ss_dssp SCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCS
T ss_pred CCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCC
Confidence 44444455555544444444455555555555555554445555555566666666666666665555666666666666
Q ss_pred CCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccC--CCCcccccCCCCCCEEECCCCc
Q 046438 417 NPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQ--GSIPNSIGDLISLECLDLSNNI 490 (851)
Q Consensus 417 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~ 490 (851)
|++++..+..|..+. + -.....|+.|++++|.+. +..|..|..+++|+.|+|++|+
T Consensus 274 N~l~~~~~~~~~~~~----------------~--~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 274 NNITKVGVNDFCPVG----------------F--GVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SCCCBCCTTSSSCSS----------------C--CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CCCCccChhHccccc----------------c--ccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 666544333332210 0 011345677777777765 4566677777777777777764
No 173
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.8e-33 Score=295.50 Aligned_cols=201 Identities=27% Similarity=0.511 Sum_probs=175.3
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEecc
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYM 704 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 704 (851)
.++|++.+.||+|+||.||+|++.++..||+|+++... ...+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence 46799999999999999999999888899999997543 234778999999999999999999999864 4688999999
Q ss_pred CCCChhHHhhcCC-CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCcc
Q 046438 705 PKGSLEACLYSDN-SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMK 783 (851)
Q Consensus 705 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 783 (851)
++++|.+++.... ..+++..+..++.|+++|++|| |++||+||||||+||++++++.+||+|||.+..........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 9999999986432 3688999999999999999999 88899999999999999999999999999998765443333
Q ss_pred ccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 784 HTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 784 ~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
.....+++.|+|||++.+..++.++||||+|+++|||++ |+.||...
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 214 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc
Confidence 334456889999999988889999999999999999999 99999764
No 174
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.6e-33 Score=312.92 Aligned_cols=197 Identities=36% Similarity=0.538 Sum_probs=172.1
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCC-eeEEEEec
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDD-FKALVLDY 703 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~ 703 (851)
.++|++.+.||+|+||.||+|++ .++.||||+++... ..+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 45788999999999999999998 57899999997653 4478999999999999999999999987655 78999999
Q ss_pred cCCCChhHHhhcCCC-CcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCc
Q 046438 704 MPKGSLEACLYSDNS-NLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESM 782 (851)
Q Consensus 704 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 782 (851)
+++|+|.+++..... .+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 999999999976543 468899999999999999999 8889999999999999999999999999999864322
Q ss_pred cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 783 KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 783 ~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 343 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~ 391 (450)
T 1k9a_A 343 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC
T ss_pred -ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 122357889999999999999999999999999999998 999997653
No 175
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=6.9e-33 Score=293.39 Aligned_cols=201 Identities=26% Similarity=0.369 Sum_probs=177.6
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467999999999999999999985 47889999987543 23456788999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||+++++|.+++... ..+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||.+.......
T Consensus 94 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYL---HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999987543 4688999999999999999999 88899999999999999999999999999998764332
Q ss_pred CccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 781 SMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 781 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
. ......+++.|+|||++.+..++.++||||+|+++|||++|+.||...
T Consensus 170 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 218 (294)
T 2rku_A 170 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218 (294)
T ss_dssp C-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred c-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 2 233457899999999999999999999999999999999999999764
No 176
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-33 Score=304.01 Aligned_cols=203 Identities=27% Similarity=0.387 Sum_probs=169.2
Q ss_pred HHhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchh-----hHHHHHHHHHHHhhcCCCcccceeeeeecCCe
Q 046438 623 QATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEG-----ALESFNAECEVLRSIRHRNLVRIISSCTNDDF 696 (851)
Q Consensus 623 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 696 (851)
...++|++.+.||+|+||.||+|++. +|+.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999885 5899999998754321 12467899999999999999999999999999
Q ss_pred eEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCcccc
Q 046438 697 KALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
.++||||+++ ++.+++......+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||+++..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL---HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHH---HHCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999976 88888877666788899999999999999999 8889999999999999999999999999999876
Q ss_pred CCCCCccccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 777 SGDESMKHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 777 ~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
..... ......+|+.|+|||++.+ ..++.++||||+||++|||++|..||.+.
T Consensus 163 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~ 216 (346)
T 1ua2_A 163 GSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD 216 (346)
T ss_dssp TSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 43322 2334578999999999865 45899999999999999999999998764
No 177
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=5.5e-33 Score=309.96 Aligned_cols=200 Identities=24% Similarity=0.363 Sum_probs=168.2
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecC-----Ce
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTND-----DF 696 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 696 (851)
.++|++.+.||+|+||+||+|++. +++.||+|+++... ....+++.+|++++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999985 58889999997543 23456789999999999999999999998766 57
Q ss_pred eEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCcccc
Q 046438 697 KALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
.|+||||++ |+|.+++.. ...+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+|+..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~-~~~l~~~~~~~i~~qil~aL~~L---H~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT-PIFLTEEHIKTILYNLLLGENFI---HESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHH---HHCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999996 589888854 45689999999999999999999 8889999999999999999999999999999876
Q ss_pred CCCCC---------------------ccccccccCccccCcccc-ccCCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 777 SGDES---------------------MKHTQTLATIGYMAPEYG-REGQISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 777 ~~~~~---------------------~~~~~~~~t~~y~aPE~~-~~~~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
..... ......+||++|+|||++ ....++.++||||+||++|||++|..||..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~ 254 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccc
Confidence 43221 123457899999999985 566799999999999999999997766653
No 178
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.3e-33 Score=316.85 Aligned_cols=201 Identities=29% Similarity=0.519 Sum_probs=170.1
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEecc
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYM 704 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 704 (851)
.++|++.+.||+|+||.||+|++.++..||||+++... ...+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 35688999999999999999999888889999997643 234679999999999999999999999876 6789999999
Q ss_pred CCCChhHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCcc
Q 046438 705 PKGSLEACLYSD-NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMK 783 (851)
Q Consensus 705 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 783 (851)
++|+|.+++... ...+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||+++.........
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 337 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence 999999998653 35688999999999999999999 88899999999999999999999999999998765433222
Q ss_pred ccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 784 HTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 784 ~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||.+.
T Consensus 338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~ 385 (452)
T 1fmk_A 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385 (452)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC
Confidence 333456889999999998999999999999999999999 99999764
No 179
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=312.33 Aligned_cols=201 Identities=27% Similarity=0.438 Sum_probs=173.5
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCC--eeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDD--FKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv 700 (851)
.++|++.+.||+|+||+||+|++. +|+.||+|+++... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 467999999999999999999985 48999999997543 234567889999999999999999999988765 77999
Q ss_pred EeccCCCChhHHhhcCC--CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE----CCCCcEEEeeccCcc
Q 046438 701 LDYMPKGSLEACLYSDN--SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL----DEDMVARLGDFGIAK 774 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill----~~~~~~kl~Dfg~a~ 774 (851)
|||+++|+|.+++.... ..+++..++.++.||+.|++|| |++||+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHH---HHCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999986532 3389999999999999999999 88899999999999999 778889999999998
Q ss_pred ccCCCCCccccccccCccccCcccccc--------CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 775 LLSGDESMKHTQTLATIGYMAPEYGRE--------GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 775 ~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 165 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~ 226 (396)
T 4eut_A 165 ELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (396)
T ss_dssp ECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECT
T ss_pred EccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 764432 2334579999999998865 56788999999999999999999999753
No 180
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=5.3e-36 Score=339.05 Aligned_cols=383 Identities=19% Similarity=0.178 Sum_probs=179.0
Q ss_pred cccccccccccccccCCCc-cccCCCCccEEecccccccc----ccchhhcCcccccEEEccCccccCCCCccccCCCcC
Q 046438 88 PFVQFLSLAFNQFAGHLPR-EIGNLTSLTSIDLSENHLMG----EIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTL 162 (851)
Q Consensus 88 ~~L~~L~L~~N~i~~~~~~-~l~~l~~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 162 (851)
++|++|+|++|.++..... .+..+++|++|+|++|.++. .++..+..+++|++|++++|++.+
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~------------ 70 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGD------------ 70 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHH------------
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCCh------------
Confidence 4556666666665532222 24555566666666666552 234444455555555555555543
Q ss_pred cEEEeeccccccccchhHhhhcc----cccccccccccccc----cCCccccccCCCcEEecCCCCCccccCcccc----
Q 046438 163 KILQLTNNTLSGSISSSIRLALP----NLELFSLANNNFSG----KIPSFIFNASKLSICELPDNSFSGFIPNRFH---- 230 (851)
Q Consensus 163 ~~L~L~~n~l~~~~~~~~~~~l~----~L~~L~L~~N~i~~----~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~---- 230 (851)
..+..++..++ +|++|+|++|+++. .++..+..+++|+.|+|++|.+++..+..+.
T Consensus 71 ------------~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~ 138 (461)
T 1z7x_W 71 ------------VGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLL 138 (461)
T ss_dssp ------------HHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHT
T ss_pred ------------HHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHh
Confidence 22333333333 34444444444432 2234444445555555555554433222222
Q ss_pred -CCCCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCccc-
Q 046438 231 -NMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEM- 308 (851)
Q Consensus 231 -~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l- 308 (851)
..++|++|++++|+++..... .+...+..+++|++|++++|++.+... ..+. ..+
T Consensus 139 ~~~~~L~~L~L~~n~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~-~~l~---------------------~~l~ 195 (461)
T 1z7x_W 139 DPQCRLEKLQLEYCSLSAASCE-PLASVLRAKPDFKELTVSNNDINEAGV-RVLC---------------------QGLK 195 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHH-HHHHHHHHCTTCCEEECCSSBCHHHHH-HHHH---------------------HHHH
T ss_pred cCCCcceEEECCCCCCCHHHHH-HHHHHHhhCCCCCEEECcCCCcchHHH-HHHH---------------------HHHh
Confidence 134456666666555532211 122334445555555555555432100 0000 000
Q ss_pred ccccCCcEEEecCCCCCCC----cCccccCCCCCcEEEcccccccccccccc-----cccCCCCEEEccCcccCCC----
Q 046438 309 GNLINLIIIRLGYNKLNGS----IPSTLSRLEKLQILGLENNQLEGRILDDI-----CRLARLSSVYLDHNKLSGS---- 375 (851)
Q Consensus 309 ~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~---- 375 (851)
...++|++|++++|.+++. ++..+..+++|++|++++|.+++.....+ ..+++|+.|++++|++++.
T Consensus 196 ~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 275 (461)
T 1z7x_W 196 DSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGD 275 (461)
T ss_dssp HSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHH
T ss_pred cCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHH
Confidence 0123444444444444432 23334444555555555555443221111 1244555555555555432
Q ss_pred CCccccCCccccceecccCcCccCc-hhhc-----ccCcceEEEecCCCCCCC----CccccccchhhhhhhccCCcccc
Q 046438 376 IPACFGNLASLRKLSFASNELTFVP-STFW-----NLTNILMVDLSSNPLSGS----LPLEIGNLKVLVELYLSRNNLSG 445 (851)
Q Consensus 376 ~~~~~~~l~~L~~L~L~~N~l~~~p-~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 445 (851)
++..+..+++|++|++++|+++..+ ..+. ..++|++|++++|.+++. ++..+..+++|++|++++|++++
T Consensus 276 l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 355 (461)
T 1z7x_W 276 LCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLED 355 (461)
T ss_dssp HHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHH
T ss_pred HHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccc
Confidence 3344444555555555555554211 1111 124566666666665543 23444455666666666666654
Q ss_pred cCCcccCC-----CCCccEEEccCcccCC----CCcccccCCCCCCEEECCCCcccccCCcccc-----ccccccceecc
Q 046438 446 DIPTTIGG-----LKNLQNLSLGDNNLQG----SIPNSIGDLISLECLDLSNNILSGIIPSSLE-----KLLYLKYLNVS 511 (851)
Q Consensus 446 ~~~~~~~~-----l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-----~l~~L~~l~l~ 511 (851)
..+..+.. .++|++|+|++|++++ .+|..+..+++|++|+|++|++++.....+. ...+|+.|++.
T Consensus 356 ~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~ 435 (461)
T 1z7x_W 356 AGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLY 435 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred ccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeec
Confidence 43333321 4567777777777764 5566666677777777777777643221111 12245555555
Q ss_pred Cccccc
Q 046438 512 FNRLEG 517 (851)
Q Consensus 512 ~N~l~~ 517 (851)
++.+..
T Consensus 436 ~~~~~~ 441 (461)
T 1z7x_W 436 DIYWSE 441 (461)
T ss_dssp TCCCCH
T ss_pred ccccCH
Confidence 555543
No 181
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=6.6e-33 Score=302.21 Aligned_cols=207 Identities=29% Similarity=0.465 Sum_probs=179.2
Q ss_pred cHHHHHHHhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch--------hhHHHHHHHHHHHhhc-CCCcccc
Q 046438 617 SYQELLQATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE--------GALESFNAECEVLRSI-RHRNLVR 686 (851)
Q Consensus 617 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l-~h~niv~ 686 (851)
.+.......++|++.+.||+|+||.||+|++. +|+.||||+++.... ...+.+.+|+++++++ +||||++
T Consensus 85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 164 (365)
T 2y7j_A 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164 (365)
T ss_dssp HHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred cchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 34445556678999999999999999999985 699999999975431 1245688999999999 7999999
Q ss_pred eeeeeecCCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEE
Q 046438 687 IISSCTNDDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVAR 766 (851)
Q Consensus 687 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~k 766 (851)
+++++...+..++||||+++++|.+++... ..+++..+..++.||+.|++|| |+.||+||||||+||+++.++.+|
T Consensus 165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~L---H~~gi~H~Dlkp~NIl~~~~~~ik 240 (365)
T 2y7j_A 165 LIDSYESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFL---HANNIVHRDLKPENILLDDNMQIR 240 (365)
T ss_dssp EEEEEEBSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEE
T ss_pred EEEEEeeCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEE
Confidence 999999999999999999999999988643 4688999999999999999999 788999999999999999999999
Q ss_pred EeeccCccccCCCCCccccccccCccccCcccccc------CCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 767 LGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGRE------GQISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 767 l~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
|+|||++....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 241 l~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 307 (365)
T 2y7j_A 241 LSDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307 (365)
T ss_dssp ECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence 99999998765332 2344679999999998853 3688999999999999999999999965
No 182
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.7e-33 Score=297.33 Aligned_cols=255 Identities=31% Similarity=0.488 Sum_probs=228.9
Q ss_pred ccccEEeccCCCccCC-CCCCccccccccccEEEeec-CccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCc
Q 046438 262 KKLKVLSLTGNPLLDC-VLPSSIGNLSLSMERFYLHN-CNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQ 339 (851)
Q Consensus 262 ~~L~~L~Ls~N~l~~~-~~p~~~~~~~~~L~~L~L~~-n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 339 (851)
.+++.|++++|.+... .+|..+..+. .|+.|++++ |++.+.+|..++++++|++|++++|.+++..|..|.++++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~-~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLP-YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCT-TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred ceEEEEECCCCCccCCcccChhHhCCC-CCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 3566666666666421 4566666654 788888884 888889999999999999999999999989999999999999
Q ss_pred EEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCc-cccceecccCcCc-cCchhhcccCcceEEEecCC
Q 046438 340 ILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLA-SLRKLSFASNELT-FVPSTFWNLTNILMVDLSSN 417 (851)
Q Consensus 340 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~-~~p~~~~~l~~L~~L~Ls~N 417 (851)
+|++++|.+++..|..+..+++|++|++++|++++.+|..+..++ +|++|++++|+++ .+|..+..+. |+.|++++|
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC
Confidence 999999999999999999999999999999999988999999998 9999999999998 7888888887 999999999
Q ss_pred CCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCc
Q 046438 418 PLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPS 497 (851)
Q Consensus 418 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 497 (851)
++++..|..|+.+++|+.|++++|++++..|. +..+++|++|+|++|++++.+|..+..+++|++|+|++|++++.+|.
T Consensus 208 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 286 (313)
T 1ogq_A 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred cccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCC
Confidence 99999999999999999999999999976665 88999999999999999999999999999999999999999999998
Q ss_pred cccccccccceeccCccccccCC
Q 046438 498 SLEKLLYLKYLNVSFNRLEGEIP 520 (851)
Q Consensus 498 ~l~~l~~L~~l~l~~N~l~~~~p 520 (851)
. ..+++|+.+++++|+.-|..|
T Consensus 287 ~-~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 287 G-GNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp S-TTGGGSCGGGTCSSSEEESTT
T ss_pred C-ccccccChHHhcCCCCccCCC
Confidence 7 899999999999999666555
No 183
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.6e-33 Score=314.65 Aligned_cols=194 Identities=23% Similarity=0.379 Sum_probs=154.0
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeec-----CCe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTN-----DDF 696 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~ 696 (851)
.++|++.+.||+|+||+||+|++. +++.||+|++.... ....+++.+|+++++.++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999885 68899999986543 2345678999999999999999999999843 357
Q ss_pred eEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCcccc
Q 046438 697 KALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
.|+||||+ +++|.+++.. ...+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~-~~~l~~~~~~~~~~qi~~aL~~L---H~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRT-PVYLTELHIKTLLYNLLVGVKYV---HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhccc-CCCCCHHHHHHHHHHHHHHHHHH---HhCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 89999998 5688888754 45689999999999999999999 8889999999999999999999999999999876
Q ss_pred CCCCC--------------------------ccccccccCccccCcccc-ccCCCCcchhhHHHHHHHHHHHhC
Q 046438 777 SGDES--------------------------MKHTQTLATIGYMAPEYG-REGQISTEGDVYSFGIMLMEIFTR 823 (851)
Q Consensus 777 ~~~~~--------------------------~~~~~~~~t~~y~aPE~~-~~~~~~~~~DvwslG~il~el~~g 823 (851)
..... ......+||++|+|||++ ....++.++||||+||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 42211 123446789999999976 566799999999999999999993
No 184
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4.4e-33 Score=291.18 Aligned_cols=196 Identities=24% Similarity=0.475 Sum_probs=171.4
Q ss_pred cCCCccceeccccceEEEEEEEcCCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecC--CeeEEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTND--DFKALVL 701 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 701 (851)
++|++.+.||+|+||+||+|++ +++.||+|+++... ....+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 5799999999999999999998 58899999997653 33456799999999999999999999999887 6889999
Q ss_pred eccCCCChhHHhhcCCC-CcCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCEEECCCCcEEEeeccCccccCC
Q 046438 702 DYMPKGSLEACLYSDNS-NLDIFKRLNIVIDIALALEYLHFGHPNP--VVHCDIKPSNVLLDEDMVARLGDFGIAKLLSG 778 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~L~~~h~~~--ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~ 778 (851)
||+++|+|.+++..... .+++..+..++.|+++|++|| |++| |+||||||+||+++.++.++++|||++.....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL---HTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHH---TTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHH---hcCCCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 99999999999976543 589999999999999999999 8888 99999999999999999999999998764322
Q ss_pred CCCccccccccCccccCccccccCCCCc---chhhHHHHHHHHHHHhCCCCCCccC
Q 046438 779 DESMKHTQTLATIGYMAPEYGREGQIST---EGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 779 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~---~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
....+|+.|+|||++.+..++. ++||||+||++|||++|+.||....
T Consensus 166 ------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 215 (271)
T 3kmu_A 166 ------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS 215 (271)
T ss_dssp ------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC
T ss_pred ------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence 2346899999999988765444 7999999999999999999997643
No 185
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=6.2e-33 Score=299.23 Aligned_cols=201 Identities=26% Similarity=0.369 Sum_probs=177.8
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467999999999999999999985 47889999987543 23456788999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||+++++|.+++... ..+++..++.++.||++|++|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 120 ~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYL---HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHH---HHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999987543 5688999999999999999999 78899999999999999999999999999998764332
Q ss_pred CccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 781 SMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 781 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
. ......+++.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 196 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 244 (335)
T 2owb_A 196 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244 (335)
T ss_dssp C-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred c-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC
Confidence 2 233457899999999999999999999999999999999999999764
No 186
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.4e-33 Score=296.70 Aligned_cols=201 Identities=29% Similarity=0.416 Sum_probs=174.2
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
..++|++.+.||+|+||.||+|++. +|+.||+|++.... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4578999999999999999999985 48999999997543 34678999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCc
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESM 782 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 782 (851)
|+++++|.+++......+++..+..++.|++.|++|| |++||+||||+|+||+++.++.+||+|||.+........
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~- 180 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYL---HFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA- 180 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-
Confidence 9999999999876667789999999999999999999 888999999999999999999999999999987643322
Q ss_pred cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 783 KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 783 ~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
......+++.|+|||++.+..++.++||||+|+++|||++|+.||...
T Consensus 181 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 228 (314)
T 3com_A 181 KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228 (314)
T ss_dssp CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 233457899999999999999999999999999999999999999764
No 187
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.4e-33 Score=298.69 Aligned_cols=204 Identities=25% Similarity=0.438 Sum_probs=177.5
Q ss_pred hcCCCccceeccccceEEEEEEE------cCCcEEEEEEEeecch-hhHHHHHHHHHHHhhc-CCCcccceeeeeecCCe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF------LDGMEVAIKVFHLQLE-GALESFNAECEVLRSI-RHRNLVRIISSCTNDDF 696 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 696 (851)
.++|++.+.||+|+||.||+|++ .+++.||+|+++.... ...+.+.+|+++++++ +||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 46799999999999999999986 2467899999975542 3457799999999999 89999999999999999
Q ss_pred eEEEEeccCCCChhHHhhcCCC-----------------CcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE
Q 046438 697 KALVLDYMPKGSLEACLYSDNS-----------------NLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL 759 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill 759 (851)
.++||||+++|+|.+++..... .+++..++.++.||++|++|| |++||+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCccceEEE
Confidence 9999999999999999876432 488999999999999999999 88899999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCCc-cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 760 DEDMVARLGDFGIAKLLSGDESM-KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 760 ~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++||||+||++|||++ |+.||....
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 252 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP 252 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence 99999999999999876543321 2233457889999999999999999999999999999999 999997644
No 188
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.7e-33 Score=298.96 Aligned_cols=203 Identities=24% Similarity=0.319 Sum_probs=172.7
Q ss_pred hcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeec----CCeeEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTN----DDFKAL 699 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~l 699 (851)
.++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|+++++.++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 36799999999999999999998 5689999999977666667889999999999999999999999863 347899
Q ss_pred EEeccCCCChhHHhhc---CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCcccc
Q 046438 700 VLDYMPKGSLEACLYS---DNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
||||+++|+|.+++.. ....+++..++.++.||++|++|| |++||+||||||+||+++.++.+||+|||.+...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI---HAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999998865 456789999999999999999999 7889999999999999999999999999998765
Q ss_pred CCCCCc--------cccccccCccccCccccccCC---CCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 777 SGDESM--------KHTQTLATIGYMAPEYGREGQ---ISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 777 ~~~~~~--------~~~~~~~t~~y~aPE~~~~~~---~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
...... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||+..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 249 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV 249 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHH
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhh
Confidence 321110 112345799999999987554 688999999999999999999999754
No 189
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2e-33 Score=298.81 Aligned_cols=201 Identities=26% Similarity=0.495 Sum_probs=173.7
Q ss_pred cCCCccceeccccceEEEEEEE-----cCCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecC--Cee
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRF-----LDGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTND--DFK 697 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 697 (851)
..|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 5689999999999999999984 358899999997543 23457789999999999999999999999876 568
Q ss_pred EEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccC
Q 046438 698 ALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLS 777 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~ 777 (851)
++||||+++|+|.+++......+++..++.++.|++.|++|| |++||+||||||+||+++.++.+||+|||++....
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHh---hcCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 999999999999999977677799999999999999999999 88899999999999999999999999999998765
Q ss_pred CCCC--ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 778 GDES--MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 778 ~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
.... .......+|+.|+|||++.+..++.++||||+||++|||++|+.|+..
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 231 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSS 231 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcc
Confidence 4332 123345678889999999998999999999999999999999998643
No 190
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.5e-33 Score=296.28 Aligned_cols=200 Identities=25% Similarity=0.359 Sum_probs=174.1
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
..++|++.+.||+|+||.||+|++. +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 3467999999999999999999985 689999999986654455678899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE---CCCCcEEEeeccCccccCCC
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL---DEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill---~~~~~~kl~Dfg~a~~~~~~ 779 (851)
|+++++|.+++... ..+++..+..++.|++.|++|| |++||+||||||+||++ +.++.+||+|||++......
T Consensus 87 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 87 LVSGGELFDRILER-GVYTEKDASLVIQQVLSAVKYL---HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred cCCCccHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 99999999888553 4588999999999999999999 88899999999999999 78899999999998764322
Q ss_pred CCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 780 ESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 780 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
......+++.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 210 (304)
T 2jam_A 163 ---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE 210 (304)
T ss_dssp ---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred ---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 223456899999999999999999999999999999999999999753
No 191
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.4e-33 Score=292.06 Aligned_cols=197 Identities=27% Similarity=0.515 Sum_probs=162.4
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecch----hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLE----GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
.++|++.+.||+|+||.||+|++ .++.||+|+++.... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 35789999999999999999998 588999999875432 2346789999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCC---cEecCCCCCCEEECC--------CCcEEEee
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNP---VVHCDIKPSNVLLDE--------DMVARLGD 769 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~---ivH~Dl~~~Nill~~--------~~~~kl~D 769 (851)
|||+++++|.+++. ...+++..++.++.|+++|++|| |++| |+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~--~~~~~~~~~~~i~~~l~~~l~~l---H~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLS--GKRIPPDILVNWAVQIARGMNYL---HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHT--SSCCCHHHHHHHHHHHHHHHHHH---HHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 99999999999884 45688999999999999999999 6666 999999999999986 77899999
Q ss_pred ccCccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 770 FGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 770 fg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
||.+....... .....+++.|+|||++.+..++.++||||+|+++|||++|+.||...
T Consensus 160 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 217 (271)
T 3dtc_A 160 FGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI 217 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred CCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99998654322 22457899999999999999999999999999999999999999764
No 192
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-33 Score=293.56 Aligned_cols=202 Identities=25% Similarity=0.487 Sum_probs=174.9
Q ss_pred cCCCccc-eeccccceEEEEEEEc---CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 626 DQFNVNN-LIGSGSFGSVYRGRFL---DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 626 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
++|.+.+ .||+|+||.||+|++. ++..||+|+++... ....+.+.+|++++++++||||+++++++ +.+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 5677776 9999999999999863 57789999998643 33457799999999999999999999999 45568999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||+++++|.+++......+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL---EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHH---HHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 999999999999977777799999999999999999999 88899999999999999999999999999998764333
Q ss_pred Cc--cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 781 SM--KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 781 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
.. ......+|+.|+|||++.+..++.++||||+||++|||++ |+.||....
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 218 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 218 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 21 1223456889999999988889999999999999999998 999997643
No 193
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=9e-33 Score=290.90 Aligned_cols=198 Identities=26% Similarity=0.444 Sum_probs=175.8
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 67999999999999999999985 57889999987542 223467899999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
||+++++|.+++... ..+++..+..++.|+++|++|| |++||+||||+|+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-- 167 (284)
T 2vgo_A 94 EFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYC---HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-- 167 (284)
T ss_dssp CCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS--
T ss_pred EeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEEcCCCCEEEecccccccCccc--
Confidence 999999999988654 4588999999999999999999 8899999999999999999999999999998765332
Q ss_pred ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
......+++.|+|||++.+..++.++||||+|+++|||++|+.||...
T Consensus 168 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 215 (284)
T 2vgo_A 168 -RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP 215 (284)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred -ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCC
Confidence 233457899999999999999999999999999999999999999753
No 194
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=7.1e-33 Score=291.61 Aligned_cols=200 Identities=26% Similarity=0.403 Sum_probs=173.9
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchh------hHHHHHHHHHHHhhcCCCcccceeeeeecCCee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEG------ALESFNAECEVLRSIRHRNLVRIISSCTNDDFK 697 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 697 (851)
.++|++.+.||+|+||.||+|++. +++.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 357999999999999999999985 5899999998764311 357799999999999999999999999999999
Q ss_pred EEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCC----cEEEeeccCc
Q 046438 698 ALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDM----VARLGDFGIA 773 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~----~~kl~Dfg~a 773 (851)
++||||+++++|.+++.. ...+++..+..++.||++|++|| |++||+||||+|+||+++.++ .+||+|||.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE-KESLTEDEATQFLKQILDGVHYL---HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 999999999999999864 34688999999999999999999 888999999999999998877 8999999999
Q ss_pred cccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 774 KLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 774 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
....... ......+++.|+|||++.+..++.++||||+|+++|||++|+.||...
T Consensus 160 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 214 (283)
T 3bhy_A 160 HKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE 214 (283)
T ss_dssp EECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred eeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc
Confidence 8764322 223456899999999999999999999999999999999999999764
No 195
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-33 Score=303.95 Aligned_cols=196 Identities=26% Similarity=0.354 Sum_probs=165.9
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCC------
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDD------ 695 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 695 (851)
.++|++.+.||+|+||.||+|++. +|+.||+|++.... ....+++.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 467999999999999999999984 68999999986543 234567889999999999999999999987653
Q ss_pred eeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccc
Q 046438 696 FKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKL 775 (851)
Q Consensus 696 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~ 775 (851)
..++||||+ +++|.+++.. ..+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYI---HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHH---HHCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 459999999 8899998865 4688999999999999999999 888999999999999999999999999999987
Q ss_pred cCCCCCccccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 776 LSGDESMKHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 776 ~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 178 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 229 (367)
T 1cm8_A 178 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229 (367)
T ss_dssp CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCC
Confidence 5432 334678999999999877 67999999999999999999999999753
No 196
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2e-33 Score=301.82 Aligned_cols=202 Identities=28% Similarity=0.469 Sum_probs=170.2
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcE----EEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGME----VAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKAL 699 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 699 (851)
++|++.+.||+|+||+||+|++. +++. ||+|.+.... ......+.+|+.++++++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 57899999999999999999874 3444 7777775432 223356778999999999999999999986 456889
Q ss_pred EEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCC
Q 046438 700 VLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~ 779 (851)
||||+++|+|.+++......+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL---EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHH---HHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHH---HhCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 9999999999999977666788999999999999999999 8889999999999999999999999999999876543
Q ss_pred CC-ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 780 ES-MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 780 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
.. .......+++.|+|||++.+..++.++||||+||++|||++ |+.||....
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 222 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR 222 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC
Confidence 32 22334567889999999999999999999999999999999 999997643
No 197
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=5.5e-33 Score=299.70 Aligned_cols=203 Identities=28% Similarity=0.525 Sum_probs=175.2
Q ss_pred hcCCCccceeccccceEEEEEEEc--------CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhc-CCCcccceeeeeecC
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL--------DGMEVAIKVFHLQL-EGALESFNAECEVLRSI-RHRNLVRIISSCTND 694 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 694 (851)
.++|++.+.||+|+||+||+|++. ++..||+|+++... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 468999999999999999999873 46789999997543 33456789999999999 899999999999999
Q ss_pred CeeEEEEeccCCCChhHHhhcCC---------------CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE
Q 046438 695 DFKALVLDYMPKGSLEACLYSDN---------------SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL 759 (851)
Q Consensus 695 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill 759 (851)
+..++||||+++|+|.+++.... ..+++..++.++.||++|++|| |++||+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCccceEEE
Confidence 99999999999999999987543 2478899999999999999999 88899999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCCc-cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 760 DEDMVARLGDFGIAKLLSGDESM-KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 760 ~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
+.++.+||+|||+++........ ......+++.|+|||++.+..++.++||||+||++|||++ |+.||...
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 263 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC
Confidence 99999999999999876543321 2223456889999999988889999999999999999999 99999764
No 198
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.4e-32 Score=292.12 Aligned_cols=277 Identities=21% Similarity=0.253 Sum_probs=147.1
Q ss_pred CCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeeccccccccchhHhhhcccccccc
Q 046438 112 TSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNTLSGSISSSIRLALPNLELFS 191 (851)
Q Consensus 112 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~ 191 (851)
++|++|+|++|.+++..+..|+++++|++|++++|++++..|..|.++++|++|++++|+++ .++..++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~---------- 120 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP---------- 120 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC----------
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc----------
Confidence 34555555555555444445555555555555555555555555555666666666655554 2222111
Q ss_pred cccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCCcchhhhhccccccccEEeccC
Q 046438 192 LANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTG 271 (851)
Q Consensus 192 L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~ 271 (851)
++|+.|++++|.++++.+..|.++++|++|++++|.++..+
T Consensus 121 -----------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---------------------- 161 (330)
T 1xku_A 121 -----------------KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG---------------------- 161 (330)
T ss_dssp -----------------TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGG----------------------
T ss_pred -----------------ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccC----------------------
Confidence 23444444444444444444555555555555555543211
Q ss_pred CCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEccccccccc
Q 046438 272 NPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGR 351 (851)
Q Consensus 272 N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 351 (851)
..+..+..+++|++|++++|.++. +|..+. ++|++|++++|.+++.
T Consensus 162 -------------------------------~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~ 207 (330)
T 1xku_A 162 -------------------------------IENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKV 207 (330)
T ss_dssp -------------------------------BCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEE
T ss_pred -------------------------------cChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCcc
Confidence 122334444444444444444442 222221 4566666666666655
Q ss_pred ccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccch
Q 046438 352 ILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLK 431 (851)
Q Consensus 352 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 431 (851)
.+..+..+++|+.|++++|++++..+..|..+++|++|++++|+++.+|..+..+++|++|++++|++++..+..|....
T Consensus 208 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~ 287 (330)
T 1xku_A 208 DAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG 287 (330)
T ss_dssp CTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS
T ss_pred CHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCCcCCccChhhcCCcc
Confidence 55556666666666666666665555566666667777777777766666666667777777777776654444443210
Q ss_pred hhhhhhccCCcccccCCcccCCCCCccEEEccCcccCC--CCcccccCCCCCCEEECCCCc
Q 046438 432 VLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQG--SIPNSIGDLISLECLDLSNNI 490 (851)
Q Consensus 432 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~ 490 (851)
.......|+.|++++|.+.. ..|..|..+.+++.++|++|+
T Consensus 288 ------------------~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 288 ------------------YNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp ------------------CCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ------------------cccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 01123455566666666542 445566666666666666663
No 199
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.8e-32 Score=293.77 Aligned_cols=287 Identities=21% Similarity=0.269 Sum_probs=176.9
Q ss_pred cCcEEEeeccccccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEec
Q 046438 161 TLKILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNL 240 (851)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 240 (851)
+++.++++++.++ .+|..+ .++|++|++++|.+++..+..+.++++|+.|+|++|.++++.|..|+++++|++|++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEI---SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCC---CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCC---CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 4555666555554 334332 244555555555555555555566666666666666666665666666666666666
Q ss_pred cCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEec
Q 046438 241 EYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLG 320 (851)
Q Consensus 241 ~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~ 320 (851)
++|+++.++.. +. ++|++|+++
T Consensus 110 ~~n~l~~l~~~-------------------------------~~---------------------------~~L~~L~l~ 131 (332)
T 2ft3_A 110 SKNHLVEIPPN-------------------------------LP---------------------------SSLVELRIH 131 (332)
T ss_dssp CSSCCCSCCSS-------------------------------CC---------------------------TTCCEEECC
T ss_pred CCCcCCccCcc-------------------------------cc---------------------------ccCCEEECC
Confidence 66655543211 11 234444444
Q ss_pred CCCCCCCcCccccCCCCCcEEEcccccccc--cccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCcc
Q 046438 321 YNKLNGSIPSTLSRLEKLQILGLENNQLEG--RILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTF 398 (851)
Q Consensus 321 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 398 (851)
+|.+.+..+..|.++++|++|++++|.++. ..+..+..+ +|+.|++++|++++ +|..+. ++|++|++++|+++.
T Consensus 132 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~ 207 (332)
T 2ft3_A 132 DNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQA 207 (332)
T ss_dssp SSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCC
T ss_pred CCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCc
Confidence 444443333344444555555555555432 334444444 55555566665553 333322 466777777777765
Q ss_pred Cc-hhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccC
Q 046438 399 VP-STFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGD 477 (851)
Q Consensus 399 ~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 477 (851)
++ ..+..+++|+.|+|++|++++..+..+..+++|++|++++|+++ .+|..+..+++|+.|++++|+|++..+..|..
T Consensus 208 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 286 (332)
T 2ft3_A 208 IELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCP 286 (332)
T ss_dssp CCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSC
T ss_pred cCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccc
Confidence 54 45666777777777777777666667777777888888888877 67777888888888888888888666666655
Q ss_pred ------CCCCCEEECCCCccc--ccCCccccccccccceeccCcc
Q 046438 478 ------LISLECLDLSNNILS--GIIPSSLEKLLYLKYLNVSFNR 514 (851)
Q Consensus 478 ------l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~l~l~~N~ 514 (851)
..+|+.|++++|.+. +..|..+..+++|+.+++++|+
T Consensus 287 ~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 287 VGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 367899999999987 6788889999999999999885
No 200
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.3e-32 Score=292.55 Aligned_cols=200 Identities=31% Similarity=0.460 Sum_probs=177.9
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
.+.|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356999999999999999999884 58899999997553 3345789999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCc
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESM 782 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 782 (851)
|+++++|.+++.. ..+++..+..++.|++.|++|| |++||+||||+|+||+++.++.+||+|||++....... .
T Consensus 101 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 174 (303)
T 3a7i_A 101 YLGGGSALDLLEP--GPLDETQIATILREILKGLDYL---HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-I 174 (303)
T ss_dssp CCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-C
T ss_pred eCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCChheEEECCCCCEEEeecccceecCccc-c
Confidence 9999999998853 5688999999999999999999 88899999999999999999999999999998764332 2
Q ss_pred cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 783 KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 783 ~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
......+++.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 222 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc
Confidence 334467899999999999999999999999999999999999999764
No 201
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=8.7e-33 Score=293.01 Aligned_cols=202 Identities=23% Similarity=0.366 Sum_probs=170.8
Q ss_pred HhcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeee-ecCCeeEEEE
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSC-TNDDFKALVL 701 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~ 701 (851)
..++|++.+.||+|+||+||+|++ .+++.||+|++..... ...+.+|+++++.++|++++..++.+ .+.+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999998 5688999998765432 24588899999999988877776655 5667889999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE---CCCCcEEEeeccCccccCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL---DEDMVARLGDFGIAKLLSG 778 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill---~~~~~~kl~Dfg~a~~~~~ 778 (851)
||+ +++|.+++......+++..+..++.||+.|++|| |++||+||||||+||++ +.++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI---HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 9999999987677899999999999999999999 88899999999999999 7889999999999987654
Q ss_pred CCC------ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 779 DES------MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 779 ~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
... .......+|+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 219 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK 219 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccc
Confidence 322 12234578999999999999999999999999999999999999998643
No 202
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.4e-33 Score=301.71 Aligned_cols=201 Identities=28% Similarity=0.442 Sum_probs=177.3
Q ss_pred cCCCccceeccccceEEEEEEE-----cCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeee--cCCeeE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRF-----LDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCT--NDDFKA 698 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~ 698 (851)
++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5799999999999999999985 357889999998776666678999999999999999999999876 445789
Q ss_pred EEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCC
Q 046438 699 LVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSG 778 (851)
Q Consensus 699 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~ 778 (851)
+||||+++++|.+++......+++..++.++.|+++|++|| |++||+||||||+||+++.++.+||+|||+++....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 99999999999999977566789999999999999999999 788999999999999999999999999999987643
Q ss_pred CCCc--cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 779 DESM--KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 779 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
.... ......+|+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 232 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCS 232 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 3321 22334678889999999988899999999999999999999999864
No 203
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=6.1e-33 Score=301.68 Aligned_cols=201 Identities=26% Similarity=0.418 Sum_probs=172.4
Q ss_pred cCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecch--hhHHHHHHHHHHHhhcCCCcccceeeeeecC--------
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLE--GALESFNAECEVLRSIRHRNLVRIISSCTND-------- 694 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-------- 694 (851)
++|++.+.||+|+||+||+|++ .+|+.||+|++..... .....+.+|++++++++||||+++++++.+.
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 6799999999999999999998 4689999999865432 2345678999999999999999999998773
Q ss_pred CeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCcc
Q 046438 695 DFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAK 774 (851)
Q Consensus 695 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~ 774 (851)
+..++||||+++ ++.+.+......+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+|+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI---HRNKILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 468999999975 77777766667799999999999999999999 88899999999999999999999999999998
Q ss_pred ccCCCC---CccccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 775 LLSGDE---SMKHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 775 ~~~~~~---~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
...... ........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 232 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 232 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCC
Confidence 764222 122344578999999998876 56899999999999999999999999764
No 204
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=6.2e-33 Score=301.43 Aligned_cols=201 Identities=22% Similarity=0.365 Sum_probs=176.9
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhh-----------------HHHHHHHHHHHhhcCCCcccce
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGA-----------------LESFNAECEVLRSIRHRNLVRI 687 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~~ 687 (851)
.++|++.+.||+|+||.||+|++ +++.||+|++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36899999999999999999999 99999999997543221 1789999999999999999999
Q ss_pred eeeeecCCeeEEEEeccCCCChhHH------hhcC-CCCcCHHHHHHHHHHHHHHHHHHHhcCC-CCcEecCCCCCCEEE
Q 046438 688 ISSCTNDDFKALVLDYMPKGSLEAC------LYSD-NSNLDIFKRLNIVIDIALALEYLHFGHP-NPVVHCDIKPSNVLL 759 (851)
Q Consensus 688 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~~~~~~~~~i~~~i~~~l~~L~~~h~-~~ivH~Dl~~~Nill 759 (851)
++++.+.+..++||||+++++|.++ +... ...+++..++.++.|++.|++|| |+ +||+||||+|+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYI---HNEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHH---HHTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHH---hccCCEeecCCChHhEEE
Confidence 9999999999999999999999988 5432 56789999999999999999999 76 899999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCCccccccccCccccCccccccC-CCCc-chhhHHHHHHHHHHHhCCCCCCccCc
Q 046438 760 DEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREG-QIST-EGDVYSFGIMLMEIFTRKRPTDEIFS 832 (851)
Q Consensus 760 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~-~~DvwslG~il~el~~g~~pf~~~~~ 832 (851)
+.++.+||+|||.+...... ......+++.|+|||++.+. .++. ++||||+||++|||++|+.||.....
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 257 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS 257 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 99999999999999876432 33446789999999999877 6666 89999999999999999999976544
No 205
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=6.5e-33 Score=297.95 Aligned_cols=209 Identities=22% Similarity=0.324 Sum_probs=177.2
Q ss_pred cHHHHHHHhcCCCcc-ceeccccceEEEEEEEc-CCcEEEEEEEeecch--hhHHHHHHHHHHHhhcC-CCcccceeeee
Q 046438 617 SYQELLQATDQFNVN-NLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE--GALESFNAECEVLRSIR-HRNLVRIISSC 691 (851)
Q Consensus 617 ~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~~~~~~ 691 (851)
.++......++|.+. +.||+|+||+||+|++. +++.||+|+++.... .....+.+|+.++++++ ||||+++++++
T Consensus 19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~ 98 (327)
T 3lm5_A 19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY 98 (327)
T ss_dssp CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence 344455567788887 89999999999999985 589999999976432 23567899999999995 69999999999
Q ss_pred ecCCeeEEEEeccCCCChhHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC---CCcEEE
Q 046438 692 TNDDFKALVLDYMPKGSLEACLYSD-NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE---DMVARL 767 (851)
Q Consensus 692 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~---~~~~kl 767 (851)
.+.+..++||||+++|+|.+++... ...+++..++.++.|++.|++|| |++||+||||||+||+++. ++.+||
T Consensus 99 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~L---H~~givH~Dikp~NIl~~~~~~~~~~kL 175 (327)
T 3lm5_A 99 ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYL---HQNNIVHLDLKPQNILLSSIYPLGDIKI 175 (327)
T ss_dssp ECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESCBTTBCCEEE
T ss_pred EeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeecCcCChHHEEEecCCCCCcEEE
Confidence 9999999999999999999987543 46689999999999999999999 8889999999999999987 789999
Q ss_pred eeccCccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 768 GDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 768 ~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
+|||+++...... ......+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 176 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 236 (327)
T 3lm5_A 176 VDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGE 236 (327)
T ss_dssp CCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999998764322 233457999999999999999999999999999999999999999764
No 206
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=8.2e-33 Score=313.89 Aligned_cols=200 Identities=24% Similarity=0.405 Sum_probs=173.7
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
..++|++.+.||+|+||+||+|++. +++.||+|++.... ......+.+|++++++++||||+++++++.+....++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3467999999999999999999985 68999999997543 23456789999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEEC---CCCcEEEeeccCccccC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLD---EDMVARLGDFGIAKLLS 777 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~---~~~~~kl~Dfg~a~~~~ 777 (851)
|||+++|+|.+.+... ..+++..+..++.||+.|++|| |++||+||||||+||+++ .++.+||+|||+++...
T Consensus 100 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 100 GELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYM---HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 9999999998887554 4688999999999999999999 888999999999999995 56689999999998764
Q ss_pred CCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 778 GDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 778 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.
T Consensus 176 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~ 225 (486)
T 3mwu_A 176 QNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK 225 (486)
T ss_dssp CC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 332 2344579999999999875 5899999999999999999999999764
No 207
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.6e-32 Score=288.36 Aligned_cols=199 Identities=27% Similarity=0.421 Sum_probs=170.7
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeec----CCeeE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTN----DDFKA 698 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~ 698 (851)
..|++.+.||+|+||+||+|++. ++..||+|++.... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34788899999999999999884 57889999987543 3345778999999999999999999998765 35689
Q ss_pred EEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCEEEC-CCCcEEEeeccCccc
Q 046438 699 LVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNP--VVHCDIKPSNVLLD-EDMVARLGDFGIAKL 775 (851)
Q Consensus 699 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~--ivH~Dl~~~Nill~-~~~~~kl~Dfg~a~~ 775 (851)
+||||+++++|.+++... ..+++..+..++.||+.|++|| |++| |+||||||+||+++ .++.+||+|||++..
T Consensus 106 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~l---H~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFL---HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHH---HcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 999999999999998653 5688899999999999999999 7777 99999999999997 789999999999976
Q ss_pred cCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccCc
Q 046438 776 LSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFS 832 (851)
Q Consensus 776 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 832 (851)
.... ......+|+.|+|||++. ..++.++||||+||++|+|++|+.||.....
T Consensus 182 ~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 234 (290)
T 1t4h_A 182 KRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN 234 (290)
T ss_dssp CCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS
T ss_pred cccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc
Confidence 5332 233457899999999886 4589999999999999999999999976443
No 208
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.7e-33 Score=298.93 Aligned_cols=213 Identities=24% Similarity=0.428 Sum_probs=180.0
Q ss_pred cHHHHHHHhcCCCccceeccccceEEEEEEEc------CCcEEEEEEEeecch-hhHHHHHHHHHHHhhc-CCCccccee
Q 046438 617 SYQELLQATDQFNVNNLIGSGSFGSVYRGRFL------DGMEVAIKVFHLQLE-GALESFNAECEVLRSI-RHRNLVRII 688 (851)
Q Consensus 617 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~ 688 (851)
...+.....++|++.+.||+|+||+||+|++. +++.||+|+++.... ...+.+.+|+++++++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 34445555788999999999999999999852 467899999976532 3456789999999999 789999999
Q ss_pred eeeecCC-eeEEEEeccCCCChhHHhhcCCCC---------------cCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCC
Q 046438 689 SSCTNDD-FKALVLDYMPKGSLEACLYSDNSN---------------LDIFKRLNIVIDIALALEYLHFGHPNPVVHCDI 752 (851)
Q Consensus 689 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~---------------~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl 752 (851)
+++.+.+ ..++||||+++|+|.+++...... +++..+..++.||++|++|| |++||+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHH---HHTTCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHH---HhCCcccccC
Confidence 9987754 589999999999999998764332 78899999999999999999 8889999999
Q ss_pred CCCCEEECCCCcEEEeeccCccccCCCCC-ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 753 KPSNVLLDEDMVARLGDFGIAKLLSGDES-MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 753 ~~~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
||+||+++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||+||++|||++ |+.||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999999999999986643322 22334567889999999999999999999999999999998 99999765
Q ss_pred Cc
Q 046438 831 FS 832 (851)
Q Consensus 831 ~~ 832 (851)
..
T Consensus 255 ~~ 256 (316)
T 2xir_A 255 KI 256 (316)
T ss_dssp CC
T ss_pred ch
Confidence 43
No 209
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.4e-33 Score=298.25 Aligned_cols=202 Identities=26% Similarity=0.445 Sum_probs=172.5
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEec
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDY 703 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 703 (851)
.++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 467999999999999999999985 5889999999876666668899999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCcc
Q 046438 704 MPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMK 783 (851)
Q Consensus 704 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 783 (851)
+++++|.+++......+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||++...... ...
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 173 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL---HSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQK 173 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HHC
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc-ccc
Confidence 999999998877667799999999999999999999 7889999999999999999999999999987543211 111
Q ss_pred ccccccCccccCcccc-----ccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 784 HTQTLATIGYMAPEYG-----REGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 784 ~~~~~~t~~y~aPE~~-----~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.....+++.|+|||++ .+..++.++||||+||++|||++|+.||...
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 225 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 225 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC
Confidence 2335689999999988 4677899999999999999999999999764
No 210
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3.7e-33 Score=300.13 Aligned_cols=201 Identities=23% Similarity=0.392 Sum_probs=164.3
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchh--hHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEG--ALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
..++|++.+.||+|+||+||+|++. +++.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 4578999999999999999999884 6889999999754322 245678999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE-----CCCCcEEEeeccCccc
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL-----DEDMVARLGDFGIAKL 775 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill-----~~~~~~kl~Dfg~a~~ 775 (851)
|||++ |+|.+++... ..+++..+..++.||+.|++|| |++||+||||||+||++ ++++.+||+|||+++.
T Consensus 112 ~e~~~-~~L~~~~~~~-~~~~~~~~~~i~~ql~~~l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKN-PDVSMRVIKSFLYQLINGVNFC---HSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EECCS-EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EecCC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH---HhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 99997 4898888654 4588999999999999999999 88899999999999999 4556699999999987
Q ss_pred cCCCCCccccccccCccccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 776 LSGDESMKHTQTLATIGYMAPEYGREG-QISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 776 ~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
...... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 187 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 241 (329)
T 3gbz_A 187 FGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD 241 (329)
T ss_dssp HC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC
Confidence 643222 23345689999999998774 5899999999999999999999999753
No 211
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.4e-33 Score=297.80 Aligned_cols=202 Identities=26% Similarity=0.503 Sum_probs=169.3
Q ss_pred cCCCccceeccccceEEEEEEEcC-----CcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFLD-----GMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKAL 699 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 699 (851)
.+|++.+.||+|+||+||+|++.. +..||+|+++... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 467888999999999999998743 2359999997543 2345678899999999999999999999999999999
Q ss_pred EEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCC
Q 046438 700 VLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~ 779 (851)
||||+++|+|.+++......+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 9999999999999987777899999999999999999999 8889999999999999999999999999999876433
Q ss_pred CCc--cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 780 ESM--KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 780 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
... ......+++.|+|||++.+..++.++||||+||++|||++ |+.||...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~ 254 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL 254 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC
Confidence 221 1222346788999999998999999999999999999999 99999754
No 212
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=8.1e-33 Score=298.01 Aligned_cols=200 Identities=27% Similarity=0.391 Sum_probs=169.5
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch--hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE--GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
++|++.+.||+|+||.||+|++. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 67999999999999999999985 489999999865432 234567899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCc
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESM 782 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 782 (851)
|++++++..+.. ....+++..+..++.|++.|++|| |++||+||||||+||+++.++.+||+|||+++.......
T Consensus 105 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 179 (331)
T 4aaa_A 105 FVDHTILDDLEL-FPNGLDYQVVQKYLFQIINGIGFC---HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE- 179 (331)
T ss_dssp CCSEEHHHHHHH-STTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred cCCcchHHHHHh-hccCCCHHHHHHHHHHHHHHHHHH---HHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc-
Confidence 999998888754 345689999999999999999999 888999999999999999999999999999976543322
Q ss_pred cccccccCccccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 783 KHTQTLATIGYMAPEYGREG-QISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 783 ~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
......+++.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 23345789999999998775 7899999999999999999999999764
No 213
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.8e-33 Score=304.84 Aligned_cols=201 Identities=20% Similarity=0.241 Sum_probs=165.7
Q ss_pred hcCCCccceeccccceEEEEEEEc----CCcEEEEEEEeecchh-----------hHHHHHHHHHHHhhcCCCcccceee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL----DGMEVAIKVFHLQLEG-----------ALESFNAECEVLRSIRHRNLVRIIS 689 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~~~~ 689 (851)
.++|++.+.||+|+||+||+|++. .+..||+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367999999999999999999985 5778999998754321 1234667888899999999999999
Q ss_pred eeec----CCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCC--
Q 046438 690 SCTN----DDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDM-- 763 (851)
Q Consensus 690 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~-- 763 (851)
++.+ ....++||||+ +++|.+++.... .+++..++.++.||+.|++|| |++||+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYI---HENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCcCHHHEEEccCCCC
Confidence 9887 67899999999 999999986544 789999999999999999999 788999999999999998877
Q ss_pred cEEEeeccCccccCCCCC------ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 764 VARLGDFGIAKLLSGDES------MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 764 ~~kl~Dfg~a~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.+||+|||+|+.+..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~ 263 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQN 263 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGG
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 999999999987643221 1123457999999999999999999999999999999999999999654
No 214
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=6.6e-33 Score=292.99 Aligned_cols=207 Identities=24% Similarity=0.300 Sum_probs=161.2
Q ss_pred hcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecch--hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLE--GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
.++|++.+.||+|+||+||+|++ .+++.||+|+++.... ...+.+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46799999999999999999998 4688999999976432 22334555566688889999999999999999999999
Q ss_pred eccCCCChhHHhhc---CCCCcCHHHHHHHHHHHHHHHHHHHhcCCC-CcEecCCCCCCEEECCCCcEEEeeccCccccC
Q 046438 702 DYMPKGSLEACLYS---DNSNLDIFKRLNIVIDIALALEYLHFGHPN-PVVHCDIKPSNVLLDEDMVARLGDFGIAKLLS 777 (851)
Q Consensus 702 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~-~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~ 777 (851)
||+++ ++.+++.. ....+++..+..++.|++.|++|| |++ ||+||||||+||+++.++.+||+|||++....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL---HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99974 77776643 466799999999999999999999 776 99999999999999999999999999998764
Q ss_pred CCCCccccccccCccccCcccc----ccCCCCcchhhHHHHHHHHHHHhCCCCCCccCcCccch
Q 046438 778 GDESMKHTQTLATIGYMAPEYG----REGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSGEMSL 837 (851)
Q Consensus 778 ~~~~~~~~~~~~t~~y~aPE~~----~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~ 837 (851)
... ......+|+.|+|||++ .+..++.++||||+||++|||++|+.||+........+
T Consensus 162 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 223 (290)
T 3fme_A 162 DDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL 223 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH
T ss_pred ccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHH
Confidence 332 22334689999999995 56678999999999999999999999997644333333
No 215
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.6e-32 Score=291.02 Aligned_cols=200 Identities=24% Similarity=0.376 Sum_probs=173.6
Q ss_pred hcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeee-ecCCeeEEEEe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSC-TNDDFKALVLD 702 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e 702 (851)
.++|++.+.||+|+||.||+|++ .+++.||+|++..... .+.+.+|+++++.++|+++++.+..+ .+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 56899999999999999999998 5689999999875433 25688999999999998877766655 55668899999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE---CCCCcEEEeeccCccccCCC
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL---DEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill---~~~~~~kl~Dfg~a~~~~~~ 779 (851)
|+ +++|.+++......+++..+..++.||++|++|| |++||+||||||+||++ +.++.+||+|||++......
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI---HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 9999999976677899999999999999999999 88899999999999999 48899999999999876543
Q ss_pred CCc------cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 780 ESM------KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 780 ~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 218 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL 218 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCc
Confidence 221 123457999999999999999999999999999999999999999864
No 216
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.2e-32 Score=292.15 Aligned_cols=202 Identities=27% Similarity=0.515 Sum_probs=170.2
Q ss_pred cCCCccceeccccceEEEEEEEcC----CcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeee-ecCCeeEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFLD----GMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSC-TNDDFKAL 699 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~l 699 (851)
.+|++.+.||+|+||+||+|++.+ ...||+|.++... ....+.+.+|++++++++||||+++++++ ..++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 468899999999999999998643 2358999887543 33457789999999999999999999985 44568899
Q ss_pred EEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCC
Q 046438 700 VLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~ 779 (851)
||||+++|+|.+++......+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 9999999999999987777889999999999999999999 8889999999999999999999999999999866433
Q ss_pred CC---ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 780 ES---MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 780 ~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
.. .......+|+.|+|||++.+..++.++||||+|+++|||++ |..||...
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~ 236 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 236 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC
Confidence 21 12233467889999999999999999999999999999999 56666543
No 217
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.3e-32 Score=293.79 Aligned_cols=202 Identities=27% Similarity=0.444 Sum_probs=165.2
Q ss_pred hcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeec---chhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQ---LEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
.++|++.+.||+|+||.||+|++ .+|+.||+|+++.. .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35799999999999999999988 46899999999753 233456788999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhc---CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccC
Q 046438 701 LDYMPKGSLEACLYS---DNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLS 777 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~ 777 (851)
|||+++++|.+++.. ....+++..++.++.|+++|++|| |++||+||||+|+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM---HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999998864 456689999999999999999999 88899999999999999999999999999987654
Q ss_pred CCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 778 GDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 778 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.... ......+++.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 239 (310)
T 2wqm_A 188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 3322 223456899999999999999999999999999999999999999754
No 218
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=9e-33 Score=314.03 Aligned_cols=200 Identities=25% Similarity=0.410 Sum_probs=170.4
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
.++|++.+.||+|+||+||+|++. ++..||+|+++... ......+.+|+++++.++||||+++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 456999999999999999999985 68899999997643 233567899999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC---CCcEEEeeccCccccCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE---DMVARLGDFGIAKLLSG 778 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~---~~~~kl~Dfg~a~~~~~ 778 (851)
||+++|+|.+.+... ..+++..+..++.||++|++|| |++||+||||||+||+++. ++.+||+|||+|+....
T Consensus 116 e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYL---HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 999999998887554 4688999999999999999999 8889999999999999976 45699999999987653
Q ss_pred CCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 779 DESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 779 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
.. ......||+.|+|||++. ..++.++||||+||++|+|++|+.||....
T Consensus 192 ~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 241 (494)
T 3lij_A 192 QK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT 241 (494)
T ss_dssp TB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred Cc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 32 234467999999999886 569999999999999999999999997643
No 219
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=1.2e-35 Score=336.02 Aligned_cols=384 Identities=21% Similarity=0.196 Sum_probs=184.9
Q ss_pred CCcEEeCCCCCCCCCCCcchhcCCccccccccccccccc----CCCccccCCCCccEEeccccccccccchhh-cCcc--
Q 046438 64 SLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAG----HLPREIGNLTSLTSIDLSENHLMGEIPHEI-GNLR-- 136 (851)
Q Consensus 64 ~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~----~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~-~~l~-- 136 (851)
+|++|||++|+++......+|..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+++..+..+ ..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 445555555555422222335555555666666555542 234455556666666666666654333222 2333
Q ss_pred --cccEEEccCccccC----CCCccccCCCcCcEEEeeccccccccchhHhhh----cccccccccccccccccC----C
Q 046438 137 --NLQALGLLSNNLVG----VVPATLFNISTLKILQLTNNTLSGSISSSIRLA----LPNLELFSLANNNFSGKI----P 202 (851)
Q Consensus 137 --~L~~L~L~~n~l~~----~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~----l~~L~~L~L~~N~i~~~~----~ 202 (851)
+|++|++++|++.. .++..+..+++|++|+|++|.+++..+..+... .++|++|++++|++++.. +
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 46666666666653 235555666666666666666654333333322 334666666666665432 3
Q ss_pred ccccccCCCcEEecCCCCCccccCcccc-----CCCCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCC
Q 046438 203 SFIFNASKLSICELPDNSFSGFIPNRFH-----NMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDC 277 (851)
Q Consensus 203 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 277 (851)
..+..+++|+.|++++|.++...+..+. .+++|++|++++|.++..+.. .+...+..+++|++|++++|++.+.
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~-~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCR-DLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHH-HHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHH-HHHHHHHhCCCccEEeccCCcCChH
Confidence 3444456666666666666554433332 244666666666666542211 1233455566666666666655321
Q ss_pred CCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCC----cCccccCCCCCcEEEccccccccccc
Q 046438 278 VLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGS----IPSTLSRLEKLQILGLENNQLEGRIL 353 (851)
Q Consensus 278 ~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~ 353 (851)
.... + .+..+..+++|++|++++|.++.. ++..+..+++|++|++++|.+++..+
T Consensus 243 ~~~~-l--------------------~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 301 (461)
T 1z7x_W 243 GMAE-L--------------------CPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301 (461)
T ss_dssp HHHH-H--------------------HHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHH
T ss_pred HHHH-H--------------------HHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHH
Confidence 1000 0 001111234444444444444322 23333344444444444444443333
Q ss_pred cccccc-----CCCCEEEccCcccCCC----CCccccCCccccceecccCcCccC-chhhcc-----cCcceEEEecCCC
Q 046438 354 DDICRL-----ARLSSVYLDHNKLSGS----IPACFGNLASLRKLSFASNELTFV-PSTFWN-----LTNILMVDLSSNP 418 (851)
Q Consensus 354 ~~~~~l-----~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~-p~~~~~-----l~~L~~L~Ls~N~ 418 (851)
..+... ++|+.|++++|.+++. ++..+..+++|++|++++|+++.. +..+.. .++|++|+|++|.
T Consensus 302 ~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCC
Confidence 222221 3455555555544432 233344445555555555555422 111211 3455555555555
Q ss_pred CCC----CCccccccchhhhhhhccCCcccccCCcc----c-CCCCCccEEEccCcccCC
Q 046438 419 LSG----SLPLEIGNLKVLVELYLSRNNLSGDIPTT----I-GGLKNLQNLSLGDNNLQG 469 (851)
Q Consensus 419 l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~----~-~~l~~L~~L~L~~N~l~~ 469 (851)
+++ .+|..+..+++|++|++++|++++..... + ....+|+.|++.++.+..
T Consensus 382 i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 382 VSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp CCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred CChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCH
Confidence 553 44555555555555555555555321111 1 123456677777666653
No 220
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.9e-33 Score=297.52 Aligned_cols=203 Identities=29% Similarity=0.481 Sum_probs=167.4
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcE----EEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGME----VAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKA 698 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 698 (851)
.++|++.+.||+|+||+||+|++. +++. ||+|.++... ....+.+.+|++++++++||||+++++++.+.. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 367999999999999999999874 3544 4667664332 334577999999999999999999999998765 78
Q ss_pred EEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCC
Q 046438 699 LVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSG 778 (851)
Q Consensus 699 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~ 778 (851)
+|+||+++|+|.+++......+++..++.++.||+.|++|| |++||+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 89999999999999988777899999999999999999999 888999999999999999999999999999987643
Q ss_pred CCC-ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 779 DES-MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 779 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
... .......+|+.|+|||++.+..++.++||||+||++|||++ |+.||+...
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 224 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC
Confidence 322 12223456889999999999999999999999999999999 999997643
No 221
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.3e-32 Score=300.89 Aligned_cols=197 Identities=21% Similarity=0.286 Sum_probs=162.2
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCC------
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDD------ 695 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 695 (851)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367999999999999999999884 58899999997643 334567889999999999999999999987654
Q ss_pred eeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccc
Q 046438 696 FKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKL 775 (851)
Q Consensus 696 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~ 775 (851)
..++||||+++ ++.+.+. ..+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH---SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHh---hccCHHHHHHHHHHHHHHHHHH---HHCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 78999999975 6777664 3478899999999999999999 888999999999999999999999999999986
Q ss_pred cCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 776 LSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 776 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.... .......+|+.|+|||++.+..++.++||||+||++|||++|+.||.+.
T Consensus 177 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 177 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 5432 1233467899999999999999999999999999999999999999763
No 222
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6.7e-33 Score=314.80 Aligned_cols=199 Identities=26% Similarity=0.437 Sum_probs=175.7
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
.++|++.+.||+|+||+||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 457999999999999999999985 68999999986542 33457799999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE---CCCCcEEEeeccCccccC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL---DEDMVARLGDFGIAKLLS 777 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill---~~~~~~kl~Dfg~a~~~~ 777 (851)
|||+++|+|.+.+... ..+++..+..++.||+.|++|| |++||+||||||+||++ +.++.+||+|||+++...
T Consensus 105 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 105 GEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYM---HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp ECCCCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 9999999999888643 5688999999999999999999 88899999999999999 567899999999998764
Q ss_pred CCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 778 GDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 778 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...
T Consensus 181 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~ 230 (484)
T 3nyv_A 181 ASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA 230 (484)
T ss_dssp CCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC
Confidence 432 2344579999999999865 6899999999999999999999999764
No 223
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.7e-32 Score=295.70 Aligned_cols=194 Identities=22% Similarity=0.367 Sum_probs=170.3
Q ss_pred cCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecchhhHHHHHHHHHHHhhcC-CCcccceeeeeec--CCeeEEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLEGALESFNAECEVLRSIR-HRNLVRIISSCTN--DDFKALVL 701 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~~lv~ 701 (851)
++|++.+.||+|+||+||+|++ .+++.||+|+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 6799999999999999999988 46889999998743 2367899999999997 9999999999987 56789999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCC-cEEEeeccCccccCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDM-VARLGDFGIAKLLSGDE 780 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~-~~kl~Dfg~a~~~~~~~ 780 (851)
||+++++|.+++. .+++..+..++.||++|++|| |++||+||||||+||+++.++ .+||+|||+|+......
T Consensus 113 e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYC---HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp ECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred eccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 9999999998874 378889999999999999999 888999999999999999776 89999999998764332
Q ss_pred CccccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 781 SMKHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 781 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
......+++.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 186 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~ 235 (330)
T 3nsz_A 186 --EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 235 (330)
T ss_dssp --CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred --ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 2334578999999999877 678999999999999999999999996543
No 224
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.4e-31 Score=288.12 Aligned_cols=197 Identities=23% Similarity=0.349 Sum_probs=93.6
Q ss_pred CCCEEEcCCCcccccccCCCCCCCcEEeCCCCCCCCCCCcchhcCCcccccccccccccccCCCccccCCCCccEEeccc
Q 046438 42 TLEILDLSNNQLSGSFPFFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSE 121 (851)
Q Consensus 42 ~L~~L~Ls~n~l~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~ 121 (851)
+++.++++++.++. +|..-.+++++|++++|+++ .++...|..+++|++|+|++|.+++..|..|+++++|++|+|++
T Consensus 32 ~l~~l~~~~~~l~~-lp~~~~~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 32 HLRVVQCSDLGLEK-VPKDLPPDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp ETTEEECTTSCCCS-CCCSCCTTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCeEEEecCCCccc-cCccCCCCCeEEECCCCcCC-EeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 44555555555542 22222345555555555555 34444455555555555555555555555555555555555555
Q ss_pred cccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeecccccc-ccchhHhhhccccccccccccccccc
Q 046438 122 NHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNTLSG-SISSSIRLALPNLELFSLANNNFSGK 200 (851)
Q Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~~~~~l~~L~~L~L~~N~i~~~ 200 (851)
|.++ .+|..+. ++|++|++++|++.+..+..+.++++|+.|++++|.+.. ......+..+++|++|++++|.++.
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~- 185 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT- 185 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-
Confidence 5555 3333322 455555555555554444445555555555555555532 1222223344444444444444442
Q ss_pred CCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCcccc
Q 046438 201 IPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYIT 246 (851)
Q Consensus 201 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~ 246 (851)
+|..+. ++|+.|++++|.++++.+..|.++++|++|+|++|+++
T Consensus 186 l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 229 (330)
T 1xku_A 186 IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS 229 (330)
T ss_dssp CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC
T ss_pred CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCc
Confidence 222211 34444444444444444444444444444444444443
No 225
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.3e-33 Score=309.85 Aligned_cols=197 Identities=15% Similarity=0.218 Sum_probs=161.7
Q ss_pred hcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeec---chhhHHHHHHHHH---HHhhcCCCccccee-------ee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQ---LEGALESFNAECE---VLRSIRHRNLVRII-------SS 690 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~---~l~~l~h~niv~~~-------~~ 690 (851)
.++|++.+.||+|+||+||+|++ .+|+.||||+++.. .....+.+.+|++ ++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46789999999999999999987 46899999999743 2345577899995 55555799999998 55
Q ss_pred eecCC-----------------eeEEEEeccCCCChhHHhhcCC------CCcCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 046438 691 CTNDD-----------------FKALVLDYMPKGSLEACLYSDN------SNLDIFKRLNIVIDIALALEYLHFGHPNPV 747 (851)
Q Consensus 691 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~L~~~h~~~i 747 (851)
+.+.+ ..++||||+ +|+|.+++.... ..+++..++.++.||++||+|| |++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASL---HHYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHH---HHTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHH---HhCCe
Confidence 55443 278999999 689999986532 1233577888999999999999 88899
Q ss_pred EecCCCCCCEEECCCCcEEEeeccCccccCCCCCccccccccCccccCccccccC-----------CCCcchhhHHHHHH
Q 046438 748 VHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREG-----------QISTEGDVYSFGIM 816 (851)
Q Consensus 748 vH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-----------~~~~~~DvwslG~i 816 (851)
+||||||+||+++.++.+||+|||+|+.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986422 2334567 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCCcc
Q 046438 817 LMEIFTRKRPTDEI 830 (851)
Q Consensus 817 l~el~~g~~pf~~~ 830 (851)
+|||++|+.||...
T Consensus 303 l~elltg~~Pf~~~ 316 (377)
T 3byv_A 303 IYWIWCADLPITKD 316 (377)
T ss_dssp HHHHHHSSCCC---
T ss_pred HHHHHHCCCCCccc
Confidence 99999999999764
No 226
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.3e-32 Score=302.46 Aligned_cols=198 Identities=23% Similarity=0.374 Sum_probs=166.3
Q ss_pred HHhcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeec--------
Q 046438 623 QATDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTN-------- 693 (851)
Q Consensus 623 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------- 693 (851)
...++|++.+.||+|+||+||+|++ .+|+.||+|++..... ...+|+++++.++||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 4567899999999999999999988 4689999999875432 23479999999999999999998843
Q ss_pred ------------------------------CCeeEEEEeccCCCChhHHhhc---CCCCcCHHHHHHHHHHHHHHHHHHH
Q 046438 694 ------------------------------DDFKALVLDYMPKGSLEACLYS---DNSNLDIFKRLNIVIDIALALEYLH 740 (851)
Q Consensus 694 ------------------------------~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~L~ 740 (851)
....++||||++ |+|.+.+.. ....+++..+..++.||++|++||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L- 157 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI- 157 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH-
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH-
Confidence 334889999997 477666543 456789999999999999999999
Q ss_pred hcCCCCcEecCCCCCCEEEC-CCCcEEEeeccCccccCCCCCccccccccCccccCccccccC-CCCcchhhHHHHHHHH
Q 046438 741 FGHPNPVVHCDIKPSNVLLD-EDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREG-QISTEGDVYSFGIMLM 818 (851)
Q Consensus 741 ~~h~~~ivH~Dl~~~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslG~il~ 818 (851)
|++||+||||||+||+++ .++.+||+|||+|+...... ......+|+.|+|||++.+. .++.++||||+||++|
T Consensus 158 --H~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 233 (383)
T 3eb0_A 158 --HSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233 (383)
T ss_dssp --HTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred --HHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence 889999999999999997 68999999999998764332 23345789999999998765 4899999999999999
Q ss_pred HHHhCCCCCCcc
Q 046438 819 EIFTRKRPTDEI 830 (851)
Q Consensus 819 el~~g~~pf~~~ 830 (851)
||++|+.||.+.
T Consensus 234 ell~g~~pf~~~ 245 (383)
T 3eb0_A 234 ELILGKPLFSGE 245 (383)
T ss_dssp HHHHSSCSSCCS
T ss_pred HHHhCCCCCCCC
Confidence 999999999764
No 227
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.4e-33 Score=303.25 Aligned_cols=199 Identities=25% Similarity=0.389 Sum_probs=174.4
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
.++|++.+.||+|+||+||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 357999999999999999999985 68899999997653 3345678999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCC-CcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPN-PVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~-~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
|+++++|.+++... ..+++..+..++.|++.|++|| |++ ||+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~l---h~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYL---REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 99999999998654 4588899999999999999999 654 8999999999999999999999999998754221
Q ss_pred ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 223457899999999999999999999999999999999999999753
No 228
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-33 Score=303.15 Aligned_cols=202 Identities=27% Similarity=0.521 Sum_probs=163.0
Q ss_pred CCCccceeccccceEEEEEEEcC--C--cEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeec-CCeeEEE
Q 046438 627 QFNVNNLIGSGSFGSVYRGRFLD--G--MEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTN-DDFKALV 700 (851)
Q Consensus 627 ~~~~~~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv 700 (851)
.|++.+.||+|+||+||+|++.+ + ..||+|.++... ....+.+.+|++++++++||||+++++++.+ ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 46778999999999999998742 2 358999886543 3455789999999999999999999998654 5578999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||+++|+|.+++......+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH---HHCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 999999999999987777789999999999999999999 88899999999999999999999999999998654322
Q ss_pred C---ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 781 S---MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 781 ~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
. .......+|+.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~ 301 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 301 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC
Confidence 1 11223457889999999999999999999999999999999 778886643
No 229
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.5e-32 Score=291.10 Aligned_cols=201 Identities=30% Similarity=0.447 Sum_probs=170.6
Q ss_pred CCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEeccC
Q 046438 627 QFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYMP 705 (851)
Q Consensus 627 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 705 (851)
+|.....||+|+||.||+|++. +++.||+|++........+.+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 4555669999999999999984 588999999987655556789999999999999999999999999999999999999
Q ss_pred CCChhHHhhcCC--CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC-CCcEEEeeccCccccCCCCCc
Q 046438 706 KGSLEACLYSDN--SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE-DMVARLGDFGIAKLLSGDESM 782 (851)
Q Consensus 706 ~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~-~~~~kl~Dfg~a~~~~~~~~~ 782 (851)
+++|.+++.... ...++..+..++.|+++|++|| |++||+||||+|+||+++. ++.+||+|||.+........
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~- 178 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL---HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP- 178 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHH---HhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-
Confidence 999999987643 3456888889999999999999 7889999999999999987 89999999999987643222
Q ss_pred cccccccCccccCccccccCC--CCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 783 KHTQTLATIGYMAPEYGREGQ--ISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 783 ~~~~~~~t~~y~aPE~~~~~~--~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
......+++.|+|||++.+.. ++.++||||+|+++|||++|+.||....
T Consensus 179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 229 (295)
T 2clq_A 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELG 229 (295)
T ss_dssp --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGS
T ss_pred cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCC
Confidence 233457899999999987643 8899999999999999999999997643
No 230
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4e-33 Score=299.95 Aligned_cols=210 Identities=28% Similarity=0.442 Sum_probs=171.0
Q ss_pred ccHHHHHHHhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhc-CCCcccceeeeeec
Q 046438 616 FSYQELLQATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSI-RHRNLVRIISSCTN 693 (851)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 693 (851)
+.+.++....++|++.+.||+|+||.||+|++. +++.||+|++..... ..+.+.+|+++++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 333444456788999999999999999999984 689999999976533 346789999999999 79999999999876
Q ss_pred ------CCeeEEEEeccCCCChhHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEE
Q 046438 694 ------DDFKALVLDYMPKGSLEACLYSD-NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVAR 766 (851)
Q Consensus 694 ------~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~k 766 (851)
.+..++||||+++++|.+++... ...+++..+..++.||+.|++|| |++||+||||||+||+++.++.+|
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL---HQHKVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTCCEE
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCcHHHEEEcCCCCEE
Confidence 45789999999999999998764 35688899999999999999999 888999999999999999999999
Q ss_pred EeeccCccccCCCCCccccccccCccccCccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 767 LGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGR-----EGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 767 l~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
|+|||++........ ......+++.|+|||++. +..++.++||||+||++|||++|+.||...
T Consensus 170 l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 237 (326)
T 2x7f_A 170 LVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237 (326)
T ss_dssp ECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred EeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 999999876543221 233457899999999986 567899999999999999999999999753
No 231
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.98 E-value=2.7e-33 Score=300.77 Aligned_cols=208 Identities=27% Similarity=0.462 Sum_probs=177.5
Q ss_pred HHHHHhcCCCccceeccccceEEEEEEEc------CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeee
Q 046438 620 ELLQATDQFNVNNLIGSGSFGSVYRGRFL------DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCT 692 (851)
Q Consensus 620 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 692 (851)
++....++|++.+.||+|+||.||+|++. .++.||+|+++... ......+.+|++++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 33445678999999999999999999764 36789999987543 234456889999999999999999999999
Q ss_pred cCCeeEEEEeccCCCChhHHhhcC---------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCC
Q 046438 693 NDDFKALVLDYMPKGSLEACLYSD---------NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDM 763 (851)
Q Consensus 693 ~~~~~~lv~e~~~~g~L~~~l~~~---------~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~ 763 (851)
+.+..++||||+++|+|.+++... ...+++..+..++.||++|++|| |++||+||||||+||+++.++
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCSGGGEEECTTC
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHH---HHCCCccCCCccceEEEcCCC
Confidence 999999999999999999988642 14568899999999999999999 888999999999999999999
Q ss_pred cEEEeeccCccccCCCCC-ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 764 VARLGDFGIAKLLSGDES-MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 764 ~~kl~Dfg~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
.+||+|||+++....... .......+|+.|+|||++.+..++.++||||+||++|||++ |+.||...
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 244 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC
Confidence 999999999976543222 12223456889999999999999999999999999999999 89999764
No 232
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=2.2e-32 Score=290.23 Aligned_cols=200 Identities=28% Similarity=0.477 Sum_probs=170.3
Q ss_pred CCCccceeccccceEEEEEEEcC-C---cEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCee-EEE
Q 046438 627 QFNVNNLIGSGSFGSVYRGRFLD-G---MEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFK-ALV 700 (851)
Q Consensus 627 ~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-~lv 700 (851)
.|++.+.||+|+||+||+|++.+ + ..||+|+++... ....+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 46667999999999999998743 2 369999987543 33457789999999999999999999999876654 899
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||+.+|+|.+++......+++..+..++.|++.|++|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999999999987777889999999999999999999 88899999999999999999999999999997654322
Q ss_pred ---CccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 781 ---SMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 781 ---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
........+++.|+|||...+..++.++||||+||++|||++|..|+..
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~ 230 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR 230 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCc
Confidence 1122345678999999999999999999999999999999996655433
No 233
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.98 E-value=9.8e-33 Score=298.72 Aligned_cols=201 Identities=24% Similarity=0.344 Sum_probs=169.5
Q ss_pred hcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecch-hhHHHHHHHHHH-HhhcCCCcccceeeeeecCCeeEEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLE-GALESFNAECEV-LRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
.++|++.+.||+|+||+||+|++ .+|+.||||+++.... ....++..|..+ ++.++||||+++++++.+.+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 46789999999999999999998 4689999999976432 233445555555 77889999999999999999999999
Q ss_pred eccCCCChhHHhhc---CCCCcCHHHHHHHHHHHHHHHHHHHhcCCC-CcEecCCCCCCEEECCCCcEEEeeccCccccC
Q 046438 702 DYMPKGSLEACLYS---DNSNLDIFKRLNIVIDIALALEYLHFGHPN-PVVHCDIKPSNVLLDEDMVARLGDFGIAKLLS 777 (851)
Q Consensus 702 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~-~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~ 777 (851)
||+++ +|.+++.. ....+++..++.++.||++|++|| |++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~l---H~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL---HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHH---HHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhcCCeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 99975 88887754 566789999999999999999999 765 99999999999999999999999999998764
Q ss_pred CCCCccccccccCccccCccccc----cCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 778 GDESMKHTQTLATIGYMAPEYGR----EGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 778 ~~~~~~~~~~~~t~~y~aPE~~~----~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
.. .......||+.|+|||++. ...++.++|||||||++|||++|+.||+...
T Consensus 206 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~ 261 (340)
T 3an0_A 206 DS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG 261 (340)
T ss_dssp CH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS
T ss_pred cc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc
Confidence 32 1223357999999999964 3478999999999999999999999997643
No 234
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.98 E-value=1.9e-32 Score=287.26 Aligned_cols=200 Identities=26% Similarity=0.460 Sum_probs=167.9
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 367999999999999999999985 68999999997543 22346788999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||+++++|.+++... ..+++..+..++.||++|++|| |++||+||||+|+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYC---HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHH---HHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999998654 4588999999999999999999 78899999999999999999999999999998764332
Q ss_pred CccccccccCccccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 781 SMKHTQTLATIGYMAPEYGREGQI-STEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 781 ~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
......+++.|+|||++.+..+ +.++||||+|+++|||++|+.||+..
T Consensus 166 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 214 (276)
T 2h6d_A 166 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred --ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 2234568999999999988765 58899999999999999999999753
No 235
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.98 E-value=2.3e-32 Score=311.43 Aligned_cols=200 Identities=27% Similarity=0.409 Sum_probs=172.5
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch-------------hhHHHHHHHHHHHhhcCCCcccceee
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE-------------GALESFNAECEVLRSIRHRNLVRIIS 689 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~~~~ 689 (851)
..++|++.+.||+|+||+||+|++. +++.||+|+++.... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3578999999999999999999985 578999999875431 23467889999999999999999999
Q ss_pred eeecCCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCC---cEE
Q 046438 690 SCTNDDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDM---VAR 766 (851)
Q Consensus 690 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~---~~k 766 (851)
++.+....++||||+++|+|.+.+... ..+++..+..++.||+.|++|| |++||+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYL---HKHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999999888653 4689999999999999999999 888999999999999998775 699
Q ss_pred EeeccCccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 767 LGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 767 l~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
|+|||+++...... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||.+.
T Consensus 190 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~ 250 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ 250 (504)
T ss_dssp ECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999998765432 334567999999999987 46899999999999999999999999764
No 236
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.98 E-value=6.4e-33 Score=301.94 Aligned_cols=196 Identities=24% Similarity=0.358 Sum_probs=154.5
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecC------C
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTND------D 695 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 695 (851)
.++|++.+.||+|+||.||+|++. +|+.||+|++.... ....+++.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 468999999999999999999874 68899999986542 23456788999999999999999999998654 5
Q ss_pred eeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccc
Q 046438 696 FKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKL 775 (851)
Q Consensus 696 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~ 775 (851)
..++|||++ +++|.+++.. ..+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 679999999 7889888754 5689999999999999999999 888999999999999999999999999999986
Q ss_pred cCCCCCccccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 776 LSGDESMKHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 776 ~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 182 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 233 (367)
T 2fst_X 182 TAD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccc----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 532 2334678999999999877 67899999999999999999999999764
No 237
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=5.1e-32 Score=292.86 Aligned_cols=204 Identities=28% Similarity=0.452 Sum_probs=167.5
Q ss_pred HHHHHHhcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhc--CCCcccceeeeeecC--
Q 046438 619 QELLQATDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSI--RHRNLVRIISSCTND-- 694 (851)
Q Consensus 619 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~-- 694 (851)
.......++|++.+.||+|+||.||+|++ .++.||+|++.... .....+|.+++... +||||+++++++.+.
T Consensus 30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp HHHTTHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred ccccccccceEEEeEeecCCCeEEEEEEE-CCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 33344567899999999999999999998 48999999986442 24455566666655 899999999998876
Q ss_pred --CeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCC--------CcEecCCCCCCEEECCCCc
Q 046438 695 --DFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPN--------PVVHCDIKPSNVLLDEDMV 764 (851)
Q Consensus 695 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~--------~ivH~Dl~~~Nill~~~~~ 764 (851)
...++||||+++|+|.+++... .+++..++.++.|++.|++|| |++ ||+||||||+||+++.++.
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~l---H~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHL---HTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHH---HSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHH---HHhhhhhccCCCEEecccchHHEEECCCCC
Confidence 6889999999999999998653 588999999999999999999 555 9999999999999999999
Q ss_pred EEEeeccCccccCCCCCc---cccccccCccccCccccccCCCCcc------hhhHHHHHHHHHHHhC----------CC
Q 046438 765 ARLGDFGIAKLLSGDESM---KHTQTLATIGYMAPEYGREGQISTE------GDVYSFGIMLMEIFTR----------KR 825 (851)
Q Consensus 765 ~kl~Dfg~a~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~------~DvwslG~il~el~~g----------~~ 825 (851)
+||+|||+++........ ......||+.|+|||++.+..++.+ +|||||||++|||++| +.
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 999999999766433221 1224579999999999987766665 9999999999999999 67
Q ss_pred CCCccC
Q 046438 826 PTDEIF 831 (851)
Q Consensus 826 pf~~~~ 831 (851)
||....
T Consensus 261 p~~~~~ 266 (337)
T 3mdy_A 261 PYHDLV 266 (337)
T ss_dssp TTTTTS
T ss_pred cHhhhc
Confidence 776543
No 238
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.98 E-value=3.4e-33 Score=303.60 Aligned_cols=199 Identities=17% Similarity=0.229 Sum_probs=170.7
Q ss_pred hcCCCccceeccccceEEEEEEEcC---------CcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccc---------
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLD---------GMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVR--------- 686 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~--------- 686 (851)
.++|++.+.||+|+||.||+|++.. ++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3679999999999999999998863 788999998754 46789999999999999988
Q ss_pred ------eeeeeec-CCeeEEEEeccCCCChhHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEE
Q 046438 687 ------IISSCTN-DDFKALVLDYMPKGSLEACLYSD-NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVL 758 (851)
Q Consensus 687 ------~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nil 758 (851)
+++++.. .+..++||||+ +++|.+++... ...+++..+..++.||++|++|| |++||+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFL---HENEYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCHHHEE
Confidence 5566655 67889999999 99999999764 46789999999999999999999 8889999999999999
Q ss_pred ECCCC--cEEEeeccCccccCCCCC------ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 759 LDEDM--VARLGDFGIAKLLSGDES------MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 759 l~~~~--~~kl~Dfg~a~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
++.++ .+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 999999999976643221 1123357999999999999999999999999999999999999999876
Q ss_pred Cc
Q 046438 831 FS 832 (851)
Q Consensus 831 ~~ 832 (851)
..
T Consensus 272 ~~ 273 (352)
T 2jii_A 272 LP 273 (352)
T ss_dssp TT
T ss_pred Cc
Confidence 43
No 239
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.98 E-value=3.7e-33 Score=319.24 Aligned_cols=201 Identities=29% Similarity=0.521 Sum_probs=175.4
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEecc
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYM 704 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 704 (851)
.++|++.+.||+|+||.||+|++.++..||||+++.... ..+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 457889999999999999999998888899999976432 34679999999999999999999999876 6789999999
Q ss_pred CCCChhHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCcc
Q 046438 705 PKGSLEACLYSD-NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMK 783 (851)
Q Consensus 705 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 783 (851)
++|+|.+++... ...+++..+..++.||++||+|| |++||+||||||+||+++.++.+||+|||+++.........
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 420 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 420 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec
Confidence 999999998653 35588999999999999999999 88899999999999999999999999999998764322222
Q ss_pred ccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 784 HTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 784 ~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
.....++..|+|||++....++.++|||||||++|||++ |+.||.+.
T Consensus 421 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~ 468 (535)
T 2h8h_A 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468 (535)
T ss_dssp TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC
T ss_pred ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 223456789999999998999999999999999999999 99999764
No 240
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.98 E-value=8.3e-33 Score=297.23 Aligned_cols=202 Identities=31% Similarity=0.533 Sum_probs=176.5
Q ss_pred hcCCCccceeccccceEEEEEEE-----cCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCC--ee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-----LDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDD--FK 697 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~ 697 (851)
.++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35689999999999999999985 358899999998766666678999999999999999999999887654 78
Q ss_pred EEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccC
Q 046438 698 ALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLS 777 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~ 777 (851)
++||||+++++|.+++......+++..++.++.|+++|++|| |++||+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 999999999999999987777799999999999999999999 78899999999999999999999999999998765
Q ss_pred CCCCc--cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 778 GDESM--KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 778 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
..... ......++..|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 250 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence 43321 12234567889999999888899999999999999999999999864
No 241
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.98 E-value=1.7e-32 Score=294.41 Aligned_cols=202 Identities=26% Similarity=0.368 Sum_probs=169.0
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch--------hhHHHHHHHHHHHhhcCCCcccceeeeeecC
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE--------GALESFNAECEVLRSIRHRNLVRIISSCTND 694 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 694 (851)
..++|++.+.||+|+||.||+|++. +++.||+|++..... .....+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3567999999999999999999985 578999999865321 1234578999999999999999999998765
Q ss_pred CeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCc---EEEeecc
Q 046438 695 DFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMV---ARLGDFG 771 (851)
Q Consensus 695 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~---~kl~Dfg 771 (851)
+ .++||||+++++|.+++.. ...+++..+..++.||++|++|| |++||+||||||+||+++.++. +||+|||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp S-EEEEEECCTTEETHHHHST-TCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred c-eEEEEecCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 5 7999999999999988854 45688999999999999999999 8889999999999999987654 9999999
Q ss_pred CccccCCCCCccccccccCccccCccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCccCc
Q 046438 772 IAKLLSGDESMKHTQTLATIGYMAPEYGR---EGQISTEGDVYSFGIMLMEIFTRKRPTDEIFS 832 (851)
Q Consensus 772 ~a~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 832 (851)
+++...... ......+|+.|+|||++. ...++.++||||+||++|||++|+.||.....
T Consensus 163 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 224 (322)
T 2ycf_A 163 HSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224 (322)
T ss_dssp TCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC
T ss_pred cceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch
Confidence 998764322 223456899999999863 56789999999999999999999999976433
No 242
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.98 E-value=1.8e-32 Score=293.35 Aligned_cols=200 Identities=27% Similarity=0.466 Sum_probs=172.2
Q ss_pred cCC-CccceeccccceEEEEEEEc-----CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecC--Ce
Q 046438 626 DQF-NVNNLIGSGSFGSVYRGRFL-----DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTND--DF 696 (851)
Q Consensus 626 ~~~-~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~ 696 (851)
++| ++.+.||+|+||+||+|.+. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+. ..
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 344 99999999999999998653 57889999997653 23456789999999999999999999999874 57
Q ss_pred eEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCcccc
Q 046438 697 KALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
.++||||+++|+|.+++... .+++..++.++.|++.|++|| |++||+||||||+||+++.++.+||+|||.+...
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~L---H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYL---HAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCchheEEEcCCCCEEECCccccccc
Confidence 89999999999999998654 488999999999999999999 8889999999999999999999999999999876
Q ss_pred CCCCCc--cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 777 SGDESM--KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 777 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
...... ......+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~ 240 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP 240 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccccc
Confidence 543321 223356788899999999889999999999999999999999998653
No 243
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.98 E-value=4.6e-33 Score=304.77 Aligned_cols=198 Identities=14% Similarity=0.145 Sum_probs=154.4
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch---hhHHHHHHHHHHHhhc--CCCccccee-------eeee
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE---GALESFNAECEVLRSI--RHRNLVRII-------SSCT 692 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l--~h~niv~~~-------~~~~ 692 (851)
.+|++.+.||+|+||+||+|++. +++.||+|+++.... ...+.+.+|+++++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45889999999999999999985 688999999987542 3456678886555555 699988755 3333
Q ss_pred cC-----------------CeeEEEEeccCCCChhHHhhcCCCCcCHHHH------HHHHHHHHHHHHHHHhcCCCCcEe
Q 046438 693 ND-----------------DFKALVLDYMPKGSLEACLYSDNSNLDIFKR------LNIVIDIALALEYLHFGHPNPVVH 749 (851)
Q Consensus 693 ~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~------~~i~~~i~~~l~~L~~~h~~~ivH 749 (851)
.. ...++||||++ |+|.+++........+..+ ..++.||++|++|| |++||+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~L---H~~~ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANL---QSKGLVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHH---HHTTEEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHH---HHCCCcc
Confidence 22 34799999998 8999998764444455555 67889999999999 8889999
Q ss_pred cCCCCCCEEECCCCcEEEeeccCccccCCCCCccccccccCccccCcccccc--CCCCcchhhHHHHHHHHHHHhCCCCC
Q 046438 750 CDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGRE--GQISTEGDVYSFGIMLMEIFTRKRPT 827 (851)
Q Consensus 750 ~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~pf 827 (851)
|||||+||+++.++.+||+|||+|+..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999875322 213457799999999987 77999999999999999999999999
Q ss_pred CccC
Q 046438 828 DEIF 831 (851)
Q Consensus 828 ~~~~ 831 (851)
....
T Consensus 294 ~~~~ 297 (371)
T 3q60_A 294 GLVT 297 (371)
T ss_dssp TBCC
T ss_pred CCcC
Confidence 8753
No 244
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.98 E-value=2.5e-32 Score=288.28 Aligned_cols=197 Identities=24% Similarity=0.364 Sum_probs=170.1
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCeeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSI-RHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 700 (851)
.++|++.+.||+|+||+||+|++. +++.||+|+++... ......+.+|+..+..+ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467999999999999999999985 68999999997643 23456788899999999 999999999999999999999
Q ss_pred EeccCCCChhHHhhcC---CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCC---------------
Q 046438 701 LDYMPKGSLEACLYSD---NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDED--------------- 762 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~--------------- 762 (851)
|||+++++|.+++... ...+++..++.++.||++|++|| |++||+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI---HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH---HhCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999999998653 25689999999999999999999 88899999999999999844
Q ss_pred ----CcEEEeeccCccccCCCCCccccccccCccccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 763 ----MVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREG-QISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 763 ----~~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
..+||+|||.+....... ...+|+.|+|||++.+. .+++++||||+||++|||++|..|+..
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~ 233 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRN 233 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSS
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcc
Confidence 479999999998764322 23589999999998765 566899999999999999999987643
No 245
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.98 E-value=2.2e-32 Score=290.31 Aligned_cols=200 Identities=26% Similarity=0.435 Sum_probs=171.1
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch--hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE--GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
++|++.+.||+|+||.||+|++. +|+.||+|+++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57999999999999999999985 689999999865432 234678899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 703 YMPKGSLEACLYSD-NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 703 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
|++ ++|.+++... ...+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||.+........
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC---HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 997 5898888654 35688899999999999999999 888999999999999999999999999999987643222
Q ss_pred ccccccccCccccCccccccCC-CCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 782 MKHTQTLATIGYMAPEYGREGQ-ISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
......+|+.|+|||++.+.. ++.++||||+||++|||++|+.||...
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 207 (299)
T 2r3i_A 159 -TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207 (299)
T ss_dssp -CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred -ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 223456899999999987755 789999999999999999999999764
No 246
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.98 E-value=1.5e-32 Score=295.47 Aligned_cols=200 Identities=29% Similarity=0.522 Sum_probs=169.5
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcE--EEEEEEeecc-hhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCeeEEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGME--VAIKVFHLQL-EGALESFNAECEVLRSI-RHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 700 (851)
++|++.+.||+|+||.||+|++. ++.. ||+|.++... ....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57999999999999999999874 4554 4999887532 23446788999999999 899999999999999999999
Q ss_pred EeccCCCChhHHhhcCC---------------CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcE
Q 046438 701 LDYMPKGSLEACLYSDN---------------SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVA 765 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~ 765 (851)
|||+++|+|.+++.... ..+++..++.++.||++|++|| |++||+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCccceEEEcCCCeE
Confidence 99999999999986543 4689999999999999999999 88899999999999999999999
Q ss_pred EEeeccCccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 766 RLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 766 kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
||+|||+++.... ........+++.|+|||++.+..++.++||||+||++|||++ |+.||...
T Consensus 182 kL~Dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~ 245 (327)
T 1fvr_A 182 KIADFGLSRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 245 (327)
T ss_dssp EECCTTCEESSCE--ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred EEcccCcCccccc--cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC
Confidence 9999999874322 112233456889999999988889999999999999999998 99999764
No 247
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.98 E-value=1.3e-32 Score=288.93 Aligned_cols=202 Identities=29% Similarity=0.460 Sum_probs=172.3
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeee--cCCeeEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCT--NDDFKAL 699 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~l 699 (851)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 367999999999999999999985 68999999997543 334567899999999999999999999874 4568899
Q ss_pred EEeccCCCChhHHhhc---CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCC-----cEecCCCCCCEEECCCCcEEEeecc
Q 046438 700 VLDYMPKGSLEACLYS---DNSNLDIFKRLNIVIDIALALEYLHFGHPNP-----VVHCDIKPSNVLLDEDMVARLGDFG 771 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~-----ivH~Dl~~~Nill~~~~~~kl~Dfg 771 (851)
||||+++++|.+++.. ....+++..++.++.|+++|++|| |++| |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC---HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHH---hcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999865 234589999999999999999999 6666 9999999999999999999999999
Q ss_pred CccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 772 IAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 772 ~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.++....... ......+++.|+|||++.+..++.++||||+|+++|||++|+.||...
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 219 (279)
T 2w5a_A 162 LARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF 219 (279)
T ss_dssp HHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc
Confidence 9987643321 223457899999999999889999999999999999999999999764
No 248
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.98 E-value=2.6e-32 Score=291.72 Aligned_cols=205 Identities=25% Similarity=0.485 Sum_probs=164.5
Q ss_pred HhcCCCccceeccccceEEEEEEEcC----CcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCC--
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFLD----GMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDD-- 695 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-- 695 (851)
..++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 45679999999999999999998742 4579999987542 334567899999999999999999999987754
Q ss_pred ---eeEEEEeccCCCChhHHhhc-----CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEE
Q 046438 696 ---FKALVLDYMPKGSLEACLYS-----DNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARL 767 (851)
Q Consensus 696 ---~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl 767 (851)
..++||||+++|+|.+++.. ....+++..++.++.||++|++|| |++||+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHH---HTTTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCcceEEEcCCCcEEE
Confidence 35899999999999998843 345689999999999999999999 8899999999999999999999999
Q ss_pred eeccCccccCCCCC-ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 768 GDFGIAKLLSGDES-MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 768 ~Dfg~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 254 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ 254 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence 99999986643322 12233457889999999999999999999999999999999 999997643
No 249
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.98 E-value=1.2e-32 Score=319.52 Aligned_cols=201 Identities=24% Similarity=0.477 Sum_probs=168.9
Q ss_pred CCCccc-eeccccceEEEEEEEc---CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 627 QFNVNN-LIGSGSFGSVYRGRFL---DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 627 ~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
++.+.+ .||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++|||||++++++.+ +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 344444 7999999999999874 45679999997653 2356789999999999999999999999976 5689999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
||+++|+|.+++......+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||+++.......
T Consensus 415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL---EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 99999999999977777799999999999999999999 888999999999999999999999999999987643322
Q ss_pred c--cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 782 M--KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 782 ~--~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
. ......+++.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~ 544 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 544 (613)
T ss_dssp ----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC
Confidence 1 1122345689999999999999999999999999999998 999997643
No 250
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.98 E-value=1.3e-32 Score=289.66 Aligned_cols=197 Identities=28% Similarity=0.480 Sum_probs=172.9
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeec---------
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTN--------- 693 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--------- 693 (851)
...+|++.+.||+|+||.||+|++. +++.||+|+++... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4567999999999999999999985 68999999997653 346789999999999999999998754
Q ss_pred -------CCeeEEEEeccCCCChhHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcE
Q 046438 694 -------DDFKALVLDYMPKGSLEACLYSD-NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVA 765 (851)
Q Consensus 694 -------~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~ 765 (851)
....++||||+++++|.+++... ...+++..++.++.||++|++|| |++||+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYI---HSKKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccCCHHHEEEcCCCCE
Confidence 34579999999999999998653 45688999999999999999999 78899999999999999999999
Q ss_pred EEeeccCccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 766 RLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 766 kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
||+|||++....... ......+++.|+|||++.+..++.++||||+|+++|||++|..||..
T Consensus 162 kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~ 223 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE 223 (284)
T ss_dssp EECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH
T ss_pred EECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh
Confidence 999999998765432 23345689999999999999999999999999999999999998753
No 251
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.98 E-value=5.7e-33 Score=295.53 Aligned_cols=205 Identities=27% Similarity=0.396 Sum_probs=158.9
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
..++|++.+.||+|+||+||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 4578999999999999999999874 68899999886543 233467889999999999999999999999999999999
Q ss_pred eccCCCChhHHhhc-------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCcc
Q 046438 702 DYMPKGSLEACLYS-------DNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAK 774 (851)
Q Consensus 702 e~~~~g~L~~~l~~-------~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~ 774 (851)
||+++++|.+++.. ....+++..+..++.||++|++|| |++||+||||+|+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL---HKNGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHH---HhCCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999998864 345689999999999999999999 78899999999999999999999999999987
Q ss_pred ccCCCCC----ccccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 775 LLSGDES----MKHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 775 ~~~~~~~----~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
....... .......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 231 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP 231 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCc
Confidence 6543221 11234578999999999876 568999999999999999999999997643
No 252
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.98 E-value=3.8e-32 Score=296.68 Aligned_cols=200 Identities=26% Similarity=0.311 Sum_probs=171.0
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecC-----Cee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTND-----DFK 697 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 697 (851)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999999985 58889999997543 33446788999999999999999999998654 368
Q ss_pred EEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccC
Q 046438 698 ALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLS 777 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~ 777 (851)
++||||++ |+|.+++.. ..+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~iv~e~~~-~~L~~~l~~--~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKT--QHLSNDHICYFLYQILRGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccC-cCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 99999996 588888754 3588999999999999999999 88899999999999999999999999999998764
Q ss_pred CCCCc--cccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 778 GDESM--KHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 778 ~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
..... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 235 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCC
Confidence 33221 1234579999999998654 55899999999999999999999999764
No 253
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.98 E-value=3.2e-32 Score=303.01 Aligned_cols=197 Identities=21% Similarity=0.306 Sum_probs=171.3
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhc------CCCcccceeeeeecCCee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSI------RHRNLVRIISSCTNDDFK 697 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~~~~ 697 (851)
..+|++.+.||+|+||+||+|++. +++.||||+++... ...+.+.+|+++++.+ +|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457999999999999999999885 48899999997542 3345677888888877 567999999999999999
Q ss_pred EEEEeccCCCChhHHhhcCC-CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCc--EEEeeccCcc
Q 046438 698 ALVLDYMPKGSLEACLYSDN-SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMV--ARLGDFGIAK 774 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~--~kl~Dfg~a~ 774 (851)
++||||++ ++|.+++.... ..+++..+..++.||+.|++|| |++||+||||||+||+++.++. +||+|||+|+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL---HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 68888876543 4589999999999999999999 7889999999999999999887 9999999997
Q ss_pred ccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 775 LLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 775 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 251 ~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 251 YEHQ----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp ETTC----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCC----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 6532 233467899999999999999999999999999999999999999764
No 254
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.98 E-value=1.9e-32 Score=301.76 Aligned_cols=196 Identities=28% Similarity=0.413 Sum_probs=164.7
Q ss_pred cCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCC------eeEE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDD------FKAL 699 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~l 699 (851)
.+|++.+.||+|+||+||+|++..+..||+|++..... ...+|+++++.++||||+++++++...+ ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 56999999999999999999998777799998865432 2347999999999999999999985433 3789
Q ss_pred EEeccCCCChhHHhh--cCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEEC-CCCcEEEeeccCcccc
Q 046438 700 VLDYMPKGSLEACLY--SDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLD-EDMVARLGDFGIAKLL 776 (851)
Q Consensus 700 v~e~~~~g~L~~~l~--~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~-~~~~~kl~Dfg~a~~~ 776 (851)
||||++++.+..... .....+++..+..++.||++|++|| |++||+||||||+||+++ .++.+||+|||+|+..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI---HSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 999998765443322 2356789999999999999999999 888999999999999998 7999999999999876
Q ss_pred CCCCCccccccccCccccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 777 SGDESMKHTQTLATIGYMAPEYGREG-QISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 777 ~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+.
T Consensus 193 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 245 (394)
T 4e7w_A 193 IAGE--PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGE 245 (394)
T ss_dssp CTTC--CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCC--CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 4332 23346789999999998764 5899999999999999999999999764
No 255
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.98 E-value=5.7e-32 Score=286.99 Aligned_cols=202 Identities=27% Similarity=0.384 Sum_probs=175.6
Q ss_pred HHhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---------hhhHHHHHHHHHHHhhcC-CCcccceeeee
Q 046438 623 QATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---------EGALESFNAECEVLRSIR-HRNLVRIISSC 691 (851)
Q Consensus 623 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~niv~~~~~~ 691 (851)
...++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|++++++++ ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34578999999999999999999985 58899999997542 123456889999999996 99999999999
Q ss_pred ecCCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeecc
Q 046438 692 TNDDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFG 771 (851)
Q Consensus 692 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg 771 (851)
.+.+..++||||+++++|.+++... ..+++..+..++.||+.|++|| |++||+||||+|+||+++.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICAL---HKLNIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcceEEEcCCCcEEEeccc
Confidence 9999999999999999999998653 5688999999999999999999 88899999999999999999999999999
Q ss_pred CccccCCCCCccccccccCccccCccccc------cCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 772 IAKLLSGDESMKHTQTLATIGYMAPEYGR------EGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 772 ~a~~~~~~~~~~~~~~~~t~~y~aPE~~~------~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.+....... ......+++.|+|||++. ...++.++||||+|+++|||++|+.||...
T Consensus 170 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 232 (298)
T 1phk_A 170 FSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 232 (298)
T ss_dssp TCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred chhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc
Confidence 998764332 233457899999999874 456889999999999999999999999653
No 256
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.98 E-value=3.9e-32 Score=293.79 Aligned_cols=202 Identities=23% Similarity=0.321 Sum_probs=158.3
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcC-CCcccceeeeee--------cC
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIR-HRNLVRIISSCT--------ND 694 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~--------~~ 694 (851)
..+|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.+++++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 357999999999999999999984 68999999997766666678999999999996 999999999883 34
Q ss_pred CeeEEEEeccCCCChhHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCEEECCCCcEEEeec
Q 046438 695 DFKALVLDYMPKGSLEACLYS--DNSNLDIFKRLNIVIDIALALEYLHFGHPNP--VVHCDIKPSNVLLDEDMVARLGDF 770 (851)
Q Consensus 695 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~--ivH~Dl~~~Nill~~~~~~kl~Df 770 (851)
...++||||++ |+|.+++.. ....+++..++.++.||+.|++|| |++| |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM---HRQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHH---HTSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HhCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 46899999995 688888754 456689999999999999999999 7778 999999999999999999999999
Q ss_pred cCccccCCCCCc-----------cccccccCccccCcccc---ccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 771 GIAKLLSGDESM-----------KHTQTLATIGYMAPEYG---REGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 771 g~a~~~~~~~~~-----------~~~~~~~t~~y~aPE~~---~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
|+++........ ......+|+.|+|||++ .+..++.++||||+||++|||++|+.||...
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 256 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG 256 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcch
Confidence 999876433221 11134689999999998 5677899999999999999999999999753
No 257
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.98 E-value=5e-32 Score=293.55 Aligned_cols=211 Identities=26% Similarity=0.434 Sum_probs=175.4
Q ss_pred cHHHHHHHhcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhh--cCCCcccceeeeeecC
Q 046438 617 SYQELLQATDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRS--IRHRNLVRIISSCTND 694 (851)
Q Consensus 617 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~ 694 (851)
+........++|++.+.||+|+||+||+|++ +++.||+|+++.. ..+.+.+|.++++. ++||||+++++++...
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 3444455678899999999999999999998 6899999999744 33567788999887 6899999999999877
Q ss_pred C----eeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHh-----cCCCCcEecCCCCCCEEECCCCcE
Q 046438 695 D----FKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHF-----GHPNPVVHCDIKPSNVLLDEDMVA 765 (851)
Q Consensus 695 ~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~-----~h~~~ivH~Dl~~~Nill~~~~~~ 765 (851)
. ..++||||+++|+|.+++.. ..+++..++.++.|++.|++|||. .|++||+||||||+||+++.++.+
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCE
T ss_pred CCccceeEEEEeecCCCcHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCE
Confidence 5 78999999999999999865 358899999999999999999941 118899999999999999999999
Q ss_pred EEeeccCccccCCCCCc---cccccccCccccCccccccCC------CCcchhhHHHHHHHHHHHhC----------CCC
Q 046438 766 RLGDFGIAKLLSGDESM---KHTQTLATIGYMAPEYGREGQ------ISTEGDVYSFGIMLMEIFTR----------KRP 826 (851)
Q Consensus 766 kl~Dfg~a~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~------~~~~~DvwslG~il~el~~g----------~~p 826 (851)
||+|||++......... ......+|+.|+|||++.+.. ++.++|||||||++|||++| +.|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 99999999776443321 223457899999999987652 33689999999999999999 788
Q ss_pred CCccCcC
Q 046438 827 TDEIFSG 833 (851)
Q Consensus 827 f~~~~~~ 833 (851)
|......
T Consensus 267 ~~~~~~~ 273 (342)
T 1b6c_B 267 YYDLVPS 273 (342)
T ss_dssp TTTTSCS
T ss_pred ccccCcC
Confidence 8765443
No 258
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.98 E-value=2.7e-32 Score=302.30 Aligned_cols=199 Identities=24% Similarity=0.323 Sum_probs=168.9
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcC--------CCcccceeeeee---
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIR--------HRNLVRIISSCT--- 692 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~--- 692 (851)
.++|++.+.||+|+||+||+|++. +++.||+|+++.. ....+.+.+|+++++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 468999999999999999999884 5888999999754 334567889999999985 788999999987
Q ss_pred -cCCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCC-CcEecCCCCCCEEECCCC-------
Q 046438 693 -NDDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPN-PVVHCDIKPSNVLLDEDM------- 763 (851)
Q Consensus 693 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~-~ivH~Dl~~~Nill~~~~------- 763 (851)
+....++||||++++.+..+.......+++..++.++.||+.||+|| |++ ||+||||||+||+++.++
T Consensus 115 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l---H~~~givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 115 VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYL---HTKCRIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHH---HHTTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HHhCCEecCCCCHHHeeEeccchhhhhhh
Confidence 45688999999954444444434446789999999999999999999 777 999999999999998775
Q ss_pred ------------------------------------------cEEEeeccCccccCCCCCccccccccCccccCcccccc
Q 046438 764 ------------------------------------------VARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGRE 801 (851)
Q Consensus 764 ------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~ 801 (851)
.+||+|||.++..... .....||+.|+|||++.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~ 267 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIG 267 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHT
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcC
Confidence 7999999999876422 234578999999999999
Q ss_pred CCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 802 GQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 802 ~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
..++.++||||+||++|||++|+.||....
T Consensus 268 ~~~~~~~DiwslG~il~elltg~~pf~~~~ 297 (397)
T 1wak_A 268 SGYNTPADIWSTACMAFELATGDYLFEPHS 297 (397)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred CCCCcHHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 999999999999999999999999997643
No 259
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.97 E-value=5.2e-32 Score=303.54 Aligned_cols=202 Identities=24% Similarity=0.347 Sum_probs=173.7
Q ss_pred hcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCC-CcccceeeeeecCCeeEEEEe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLEGALESFNAECEVLRSIRH-RNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e 702 (851)
.++|++.+.||+|+||.||+|++ .+++.||||++...... ..+.+|+++++.++| +++..+..++.+.+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999999998 46899999988754332 457889999999987 555566666677788999999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE---CCCCcEEEeeccCccccCCC
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL---DEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill---~~~~~~kl~Dfg~a~~~~~~ 779 (851)
|+ +++|.+++......+++..++.++.||+.||+|| |++||+||||||+||++ +.++.+||+|||+++.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yL---H~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV---HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 9999999987677899999999999999999999 88899999999999999 58899999999999876543
Q ss_pred CCc------cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccCc
Q 046438 780 ESM------KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFS 832 (851)
Q Consensus 780 ~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 832 (851)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~ 218 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA 218 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc
Confidence 321 12246799999999999999999999999999999999999999987543
No 260
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.97 E-value=3.2e-32 Score=302.41 Aligned_cols=195 Identities=30% Similarity=0.419 Sum_probs=163.0
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecC------CeeE
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTND------DFKA 698 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~ 698 (851)
.+|++.+.||+|+||+||+|++. +|+.||||++.... +...+|++++++++||||+++++++... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46899999999999999999985 58999999986542 2245799999999999999999987432 2467
Q ss_pred EEEeccCCCChhHHhh---cCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCC-CcEEEeeccCcc
Q 046438 699 LVLDYMPKGSLEACLY---SDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDED-MVARLGDFGIAK 774 (851)
Q Consensus 699 lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~-~~~kl~Dfg~a~ 774 (851)
+||||+++ ++.+.+. .....+++..+..++.||++||+|| |++||+||||||+||+++.+ +.+||+|||+|+
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999976 5554443 2456789999999999999999999 88999999999999999965 678999999998
Q ss_pred ccCCCCCccccccccCccccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 775 LLSGDESMKHTQTLATIGYMAPEYGREG-QISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 775 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
...... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+.
T Consensus 206 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~ 260 (420)
T 1j1b_A 206 QLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260 (420)
T ss_dssp ECCTTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hcccCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 764332 23346789999999998764 7899999999999999999999999764
No 261
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.97 E-value=2.2e-32 Score=295.51 Aligned_cols=196 Identities=30% Similarity=0.504 Sum_probs=159.4
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHH--HhhcCCCcccceeeeee-----cCCee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEV--LRSIRHRNLVRIISSCT-----NDDFK 697 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~~~~~~~-----~~~~~ 697 (851)
.++|++.+.||+|+||+||+|++ +++.||+|+++.... ..+..|.++ +..++||||+++++.+. .....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 36799999999999999999987 789999999975432 334445454 44589999999997543 23367
Q ss_pred EEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCC---------CcEecCCCCCCEEECCCCcEEEe
Q 046438 698 ALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPN---------PVVHCDIKPSNVLLDEDMVARLG 768 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~---------~ivH~Dl~~~Nill~~~~~~kl~ 768 (851)
++||||+++|+|.+++... ..++..+..++.||++|++|| |++ ||+||||||+||+++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~~L~~L---H~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYL---HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHH---HCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHhhc--ccchhHHHHHHHHHHHHHHHH---HhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 8999999999999998654 347888999999999999999 666 99999999999999999999999
Q ss_pred eccCccccCCCC-------CccccccccCccccCcccccc-------CCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 769 DFGIAKLLSGDE-------SMKHTQTLATIGYMAPEYGRE-------GQISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 769 Dfg~a~~~~~~~-------~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
|||+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||..
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 237 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence 999998764322 112224579999999999876 4567789999999999999999877644
No 262
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.97 E-value=1.7e-32 Score=295.97 Aligned_cols=205 Identities=26% Similarity=0.493 Sum_probs=175.7
Q ss_pred HhcCCCccceeccccceEEEEEEEcC-C-----cEEEEEEEeecc-hhhHHHHHHHHHHHhhc-CCCcccceeeeeecCC
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFLD-G-----MEVAIKVFHLQL-EGALESFNAECEVLRSI-RHRNLVRIISSCTNDD 695 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 695 (851)
..++|++.+.||+|+||.||+|++.. + ..||+|+++... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 45789999999999999999998743 2 479999997653 23456789999999999 8999999999999999
Q ss_pred eeEEEEeccCCCChhHHhhcC-------------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCC
Q 046438 696 FKALVLDYMPKGSLEACLYSD-------------NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDED 762 (851)
Q Consensus 696 ~~~lv~e~~~~g~L~~~l~~~-------------~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~ 762 (851)
..++||||+++|+|.+++... ...+++..++.++.||+.|++|| |++||+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHH---hcCCcccCCcccceEEECCC
Confidence 999999999999999988642 34578899999999999999999 78899999999999999999
Q ss_pred CcEEEeeccCccccCCCCC-ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 763 MVARLGDFGIAKLLSGDES-MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 763 ~~~kl~Dfg~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
+.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 271 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL 271 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc
Confidence 9999999999986543222 12233456889999999999999999999999999999998 999997643
No 263
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.97 E-value=7.5e-32 Score=287.10 Aligned_cols=203 Identities=22% Similarity=0.349 Sum_probs=169.3
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc----hhhHHHHHHHHHHHhhcCCCcccceeeeee--cCCe
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL----EGALESFNAECEVLRSIRHRNLVRIISSCT--NDDF 696 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~ 696 (851)
..++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3478999999999999999999884 58899999997543 234577999999999999999999999984 4558
Q ss_pred eEEEEeccCCCChhHHhhc-CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccc
Q 046438 697 KALVLDYMPKGSLEACLYS-DNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKL 775 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~ 775 (851)
.++||||++++ +.+++.. ....+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||.+..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L---H~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYL---HSQGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999877 6666544 356789999999999999999999 888999999999999999999999999999987
Q ss_pred cCCCC-CccccccccCccccCccccccCC--CCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 776 LSGDE-SMKHTQTLATIGYMAPEYGREGQ--ISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 776 ~~~~~-~~~~~~~~~t~~y~aPE~~~~~~--~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
..... ........+++.|+|||+..+.. ++.++||||+||++|||++|+.||...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 216 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD 216 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 64322 22233457899999999987644 477999999999999999999999763
No 264
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=4e-32 Score=288.91 Aligned_cols=195 Identities=28% Similarity=0.433 Sum_probs=164.0
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeec---------
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTN--------- 693 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--------- 693 (851)
..++|++.+.||+|+||.||+|++. +++.||+|+++.. ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 3567999999999999999999984 6899999999754 3445778999999999999999999998754
Q ss_pred ----CCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEee
Q 046438 694 ----DDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGD 769 (851)
Q Consensus 694 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~D 769 (851)
.+..++||||+++|+|.+++.......++..++.++.|+++|++|| |++||+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI---HSQGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHH---HhCCeecccCCHHhEEEcCCCCEEEee
Confidence 3578999999999999999987777788899999999999999999 888999999999999999999999999
Q ss_pred ccCccccCCCC-------------CccccccccCccccCccccccC-CCCcchhhHHHHHHHHHHHh
Q 046438 770 FGIAKLLSGDE-------------SMKHTQTLATIGYMAPEYGREG-QISTEGDVYSFGIMLMEIFT 822 (851)
Q Consensus 770 fg~a~~~~~~~-------------~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~ 822 (851)
||++....... ........+++.|+|||++.+. .++.++||||+||++|||++
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence 99997654221 1122345689999999998764 68999999999999999998
No 265
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.97 E-value=1.3e-32 Score=288.69 Aligned_cols=196 Identities=36% Similarity=0.547 Sum_probs=164.4
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecC-CeeEEEEec
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTND-DFKALVLDY 703 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~ 703 (851)
.++|++.+.||+|+||+||+|++ +|+.||+|+++... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 36799999999999999999988 58899999987543 447789999999999999999999986554 478999999
Q ss_pred cCCCChhHHhhcCCC-CcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCc
Q 046438 704 MPKGSLEACLYSDNS-NLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESM 782 (851)
Q Consensus 704 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 782 (851)
+++++|.+++..... .+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--- 170 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 170 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHH---HhCCccccCCCcceEEEeCCCcEEEeecccccccccc---
Confidence 999999999865422 378888999999999999999 8889999999999999999999999999998765332
Q ss_pred cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 783 KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 783 ~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
.....+++.|+|||++.+..++.++||||+|+++|||++ |+.||...
T Consensus 171 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 218 (278)
T 1byg_A 171 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 218 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred -ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence 223357889999999998999999999999999999998 99999764
No 266
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.97 E-value=5.6e-32 Score=291.03 Aligned_cols=201 Identities=30% Similarity=0.445 Sum_probs=171.0
Q ss_pred HhcCCCccceeccccceEEEEEEEc--CCcEEEEEEEeecchh--hHHHHHHHHHHHhhc---CCCcccceeeeee----
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL--DGMEVAIKVFHLQLEG--ALESFNAECEVLRSI---RHRNLVRIISSCT---- 692 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~niv~~~~~~~---- 692 (851)
+.++|++.+.||+|+||.||+|++. +++.||+|+++..... ....+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 4578999999999999999999983 5788999998754321 223566777777766 8999999999987
Q ss_pred -cCCeeEEEEeccCCCChhHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeec
Q 046438 693 -NDDFKALVLDYMPKGSLEACLYSD-NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDF 770 (851)
Q Consensus 693 -~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Df 770 (851)
.....++||||++ |+|.+++... ...+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL---HSHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCCHHHeEEcCCCCEEEecC
Confidence 4567899999997 6999888764 34589999999999999999999 8889999999999999999999999999
Q ss_pred cCccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 771 GIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 771 g~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
|.++...... ......+++.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 165 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (326)
T 1blx_A 165 GLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS 222 (326)
T ss_dssp CSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 9997654222 234467899999999999999999999999999999999999999764
No 267
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.97 E-value=5.6e-32 Score=290.28 Aligned_cols=201 Identities=24% Similarity=0.353 Sum_probs=165.5
Q ss_pred hcCCCccceeccccceEEEEEEEcC-CcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeee-----------
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLD-GMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCT----------- 692 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----------- 692 (851)
.++|++.+.||+|+||.||+|++.. ++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 4689999999999999999999864 8999999998766666788999999999999999999998873
Q ss_pred ---cCCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEEC-CCCcEEEe
Q 046438 693 ---NDDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLD-EDMVARLG 768 (851)
Q Consensus 693 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~-~~~~~kl~ 768 (851)
+....++||||++ |+|.+++.. ..+++..++.++.|+++|++|| |++||+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYI---HSANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999997 689988853 5688999999999999999999 888999999999999997 56799999
Q ss_pred eccCccccCCCCC--ccccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 769 DFGIAKLLSGDES--MKHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 769 Dfg~a~~~~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
|||+++....... .......+++.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 229 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC
Confidence 9999987643211 12233467999999998765 678999999999999999999999997643
No 268
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.97 E-value=3e-32 Score=293.10 Aligned_cols=203 Identities=29% Similarity=0.467 Sum_probs=170.1
Q ss_pred hcCCCccceeccccceEEEEEEE------cCCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF------LDGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFK 697 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 697 (851)
.++|++.+.||+|+||.||+|++ .+++.||+|++.... .....++.+|+.++++++||||+++++++.+.+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46899999999999999999983 347789999986442 34456788999999999999999999999999999
Q ss_pred EEEEeccCCCChhHHhhcCC------CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC---CCcEEEe
Q 046438 698 ALVLDYMPKGSLEACLYSDN------SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE---DMVARLG 768 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~---~~~~kl~ 768 (851)
++||||+++++|.+++.... ..+++..++.++.||++|++|| |++||+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L---H~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHH---hhCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999987643 4488899999999999999999 8889999999999999984 4569999
Q ss_pred eccCccccCCCCC-ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 769 DFGIAKLLSGDES-MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 769 Dfg~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
|||++........ .......+++.|+|||++.+..++.++||||+||++|||++ |+.||...
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 249 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 249 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc
Confidence 9999975532221 12234567899999999998999999999999999999998 99999764
No 269
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.97 E-value=3.1e-32 Score=301.82 Aligned_cols=199 Identities=24% Similarity=0.339 Sum_probs=153.4
Q ss_pred cCCCc-cceeccccceEEEEEEEc---CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeee--cCCeeEE
Q 046438 626 DQFNV-NNLIGSGSFGSVYRGRFL---DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCT--NDDFKAL 699 (851)
Q Consensus 626 ~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~l 699 (851)
+.|++ .++||+|+||+||+|++. +++.||+|++.... ....+.+|++++++++||||+++++++. .....++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 44666 458999999999999975 47889999987542 2356889999999999999999999994 4668999
Q ss_pred EEeccCCCChhHHhhc--------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE----CCCCcEEE
Q 046438 700 VLDYMPKGSLEACLYS--------DNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL----DEDMVARL 767 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~--------~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill----~~~~~~kl 767 (851)
||||+++ ++.+++.. ....+++..++.++.||+.|++|| |++||+||||||+||++ +.++.+||
T Consensus 98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL---HANWVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHH---HhCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 9999965 67666542 122488999999999999999999 88899999999999999 67889999
Q ss_pred eeccCccccCCCCC--ccccccccCccccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 768 GDFGIAKLLSGDES--MKHTQTLATIGYMAPEYGREG-QISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 768 ~Dfg~a~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
+|||+|+....... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 99999987643221 223346789999999998874 5899999999999999999999999754
No 270
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97 E-value=1.1e-33 Score=300.89 Aligned_cols=197 Identities=28% Similarity=0.482 Sum_probs=154.0
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhh--cCCCcccceeeeeecCC----eeE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRS--IRHRNLVRIISSCTNDD----FKA 698 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~~~ 698 (851)
.++|++.+.||+|+||.||+|++ +++.||||+++.. ....+.+|.+++.. ++||||+++++++.+.. ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 46799999999999999999987 5899999998643 33567778888887 78999999999998776 789
Q ss_pred EEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcC--------CCCcEecCCCCCCEEECCCCcEEEeec
Q 046438 699 LVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGH--------PNPVVHCDIKPSNVLLDEDMVARLGDF 770 (851)
Q Consensus 699 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h--------~~~ivH~Dl~~~Nill~~~~~~kl~Df 770 (851)
+||||+++|+|.+++... .+++..+..++.|++.|++|| | ++||+||||||+||+++.++.+||+||
T Consensus 78 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~l---H~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHL---HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-C---CCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHH---HHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeec
Confidence 999999999999998553 577788899999999999999 7 999999999999999999999999999
Q ss_pred cCccccCCCCCc---cccccccCccccCccccccC------CCCcchhhHHHHHHHHHHHhC----------CCCCCcc
Q 046438 771 GIAKLLSGDESM---KHTQTLATIGYMAPEYGREG------QISTEGDVYSFGIMLMEIFTR----------KRPTDEI 830 (851)
Q Consensus 771 g~a~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~------~~~~~~DvwslG~il~el~~g----------~~pf~~~ 830 (851)
|+++........ ......||+.|+|||++.+. .++.++|||||||++|||++| +.||...
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~ 231 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTT
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccccc
Confidence 999765433221 12334799999999998765 344689999999999999999 7777654
No 271
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.97 E-value=2e-32 Score=289.26 Aligned_cols=201 Identities=26% Similarity=0.481 Sum_probs=169.8
Q ss_pred hcCCCccc-eeccccceEEEEEEEc---CCcEEEEEEEeecch--hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeE
Q 046438 625 TDQFNVNN-LIGSGSFGSVYRGRFL---DGMEVAIKVFHLQLE--GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKA 698 (851)
Q Consensus 625 ~~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 698 (851)
.++|++.+ .||+|+||+||+|.+. .++.||+|+++.... ...+.+.+|+++++.++||||+++++++ +.+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45788888 9999999999999653 367899999976532 2356799999999999999999999999 556789
Q ss_pred EEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCC
Q 046438 699 LVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSG 778 (851)
Q Consensus 699 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~ 778 (851)
+||||+++++|.+++... ..+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||++.....
T Consensus 94 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHH---HhCCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 999999999999998654 4688999999999999999999 888999999999999999999999999999987654
Q ss_pred CCCcc--ccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 779 DESMK--HTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 779 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
..... .....+++.|+|||++.+..++.++||||+|+++|||++ |+.||...
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 224 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 224 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCC
Confidence 33221 222346788999999988889999999999999999999 99999764
No 272
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.97 E-value=1.1e-31 Score=292.96 Aligned_cols=207 Identities=27% Similarity=0.357 Sum_probs=159.8
Q ss_pred HHHHHHhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeecCC--
Q 046438 619 QELLQATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTNDD-- 695 (851)
Q Consensus 619 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-- 695 (851)
+......++|++.+.||+|+||+||+|++. +++.||||++.... .......+|++.++.++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 344556789999999999999999999984 58999999986543 22345677888889999999999999986533
Q ss_pred -----eeEEEEeccCCCChhHHhh---cCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC-CCcEE
Q 046438 696 -----FKALVLDYMPKGSLEACLY---SDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE-DMVAR 766 (851)
Q Consensus 696 -----~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~-~~~~k 766 (851)
..++||||++++ +...+. .....+++..+..++.|++.|++|||. |++||+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEEEeCCCCcEE
Confidence 378999999765 433332 245678889999999999999999931 2999999999999999996 89999
Q ss_pred EeeccCccccCCCCCccccccccCccccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 767 LGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREG-QISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 767 l~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
|+|||+++...... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 173 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~ 235 (360)
T 3e3p_A 173 LCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD 235 (360)
T ss_dssp ECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCC
Confidence 99999998765332 23345789999999998654 4899999999999999999999999764
No 273
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.97 E-value=8.1e-32 Score=294.63 Aligned_cols=195 Identities=26% Similarity=0.361 Sum_probs=166.5
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCee----
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFK---- 697 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~---- 697 (851)
.++|.+.+.||+|+||+||+|++. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 468999999999999999999985 58999999997643 23356788999999999999999999999877654
Q ss_pred --EEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccc
Q 046438 698 --ALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKL 775 (851)
Q Consensus 698 --~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~ 775 (851)
++||||++ ++|.+.+ ...+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~---~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIM---GMEFSEEKIQYLVYQMLKGLKYI---HSAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHT---TSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHh---hcCCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 5777766 34489999999999999999999 888999999999999999999999999999986
Q ss_pred cCCCCCccccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 776 LSGDESMKHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 776 ~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 194 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 245 (371)
T 4exu_A 194 ADA----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccc----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 532 2334578999999999877 78899999999999999999999999763
No 274
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.97 E-value=1.3e-31 Score=288.20 Aligned_cols=201 Identities=25% Similarity=0.318 Sum_probs=150.4
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch-hhHHHHHHHHH-HHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE-GALESFNAECE-VLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
.++|++.+.||+|+||.||+|++. +|+.||+|+++.... .....+..|.. +++.++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 367999999999999999999984 689999999976532 23344555555 777789999999999999999999999
Q ss_pred eccCCCChhHHhhc----CCCCcCHHHHHHHHHHHHHHHHHHHhcCCC-CcEecCCCCCCEEECCCCcEEEeeccCcccc
Q 046438 702 DYMPKGSLEACLYS----DNSNLDIFKRLNIVIDIALALEYLHFGHPN-PVVHCDIKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 702 e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~-~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
||+++ ++.+++.. ....+++..+..++.|++.|++|| |++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL---KENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHH---HHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHH---hccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99975 77666542 356788999999999999999999 777 9999999999999999999999999999766
Q ss_pred CCCCCccccccccCccccCcccc----ccCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 777 SGDESMKHTQTLATIGYMAPEYG----REGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 777 ~~~~~~~~~~~~~t~~y~aPE~~----~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
.... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||....
T Consensus 177 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 233 (327)
T 3aln_A 177 VDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN 233 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-
T ss_pred cccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence 4322 22334689999999998 45678999999999999999999999997643
No 275
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.97 E-value=1.3e-31 Score=289.85 Aligned_cols=197 Identities=22% Similarity=0.324 Sum_probs=172.1
Q ss_pred hcCCCccceeccccceEEEEEEE-c-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCc------ccceeeeeecCCe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-L-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRN------LVRIISSCTNDDF 696 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~ 696 (851)
.++|++.+.||+|+||+||+|.+ . +++.||+|+++.. ....+.+.+|+++++.++|++ ++++++++.+.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46899999999999999999987 3 5889999999754 334567889999999987664 9999999999999
Q ss_pred eEEEEeccCCCChhHHhhcCC-CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC--------------
Q 046438 697 KALVLDYMPKGSLEACLYSDN-SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE-------------- 761 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~-------------- 761 (851)
.++||||+ ++++.+++.... ..+++..+..++.||++|++|| |++||+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFL---HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 889988886643 4688999999999999999999 8889999999999999987
Q ss_pred -----CCcEEEeeccCccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 762 -----DMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 762 -----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
++.+||+|||.++..... .....+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 668999999999865322 23457899999999999999999999999999999999999999764
No 276
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.97 E-value=3e-32 Score=288.08 Aligned_cols=202 Identities=26% Similarity=0.463 Sum_probs=164.8
Q ss_pred hcCCCccceeccccceEEEEEEEc--CCc--EEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL--DGM--EVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFK 697 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 697 (851)
.++|++.+.||+|+||+||+|++. +++ .||+|+++... ....+.+.+|++++++++||||+++++++.+.. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357999999999999999999863 233 68999987542 334577899999999999999999999998765 7
Q ss_pred EEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccC
Q 046438 698 ALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLS 777 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~ 777 (851)
++||||+++++|.+++......+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||++....
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHH---HhCCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 899999999999999877666789999999999999999999 78899999999999999999999999999998765
Q ss_pred CCCCc--cccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 778 GDESM--KHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 778 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
..... ......+++.|+|||++.+..++.++||||+|+++|||++ |+.||...
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 228 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 228 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC
Confidence 43321 1223457888999999988889999999999999999999 99999764
No 277
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.97 E-value=1.4e-31 Score=291.34 Aligned_cols=200 Identities=25% Similarity=0.347 Sum_probs=169.3
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecC-----Cee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTND-----DFK 697 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 697 (851)
.++|++.+.||+|+||.||+|++. +|+.||+|+++... ......+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468999999999999999999985 58899999997543 23446788999999999999999999987654 678
Q ss_pred EEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccC
Q 046438 698 ALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLS 777 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~ 777 (851)
++||||++ ++|.+++.. ..+++..+..++.|++.|++|| |++||+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~L---H~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST--QMLSDDHIQYFIYQTLRAVKVL---HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999996 588888765 4688999999999999999999 78899999999999999999999999999998764
Q ss_pred CCCCc---------cccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 778 GDESM---------KHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 778 ~~~~~---------~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
..... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 226 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 32211 1223478999999998754 67899999999999999999999999764
No 278
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.97 E-value=2.5e-31 Score=292.07 Aligned_cols=200 Identities=24% Similarity=0.334 Sum_probs=171.4
Q ss_pred HhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcC-CC-----cccceeeeeecCCe
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIR-HR-----NLVRIISSCTNDDF 696 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~~~~ 696 (851)
..++|++.+.||+|+||+||+|++. +++.||+|+++.. ......+.+|+++++.++ |+ +|+++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 4578999999999999999999985 5788999999754 233466788888888885 44 49999999999999
Q ss_pred eEEEEeccCCCChhHHhhcCC-CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEEC--CCCcEEEeeccCc
Q 046438 697 KALVLDYMPKGSLEACLYSDN-SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLD--EDMVARLGDFGIA 773 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~--~~~~~kl~Dfg~a 773 (851)
.++||||++ ++|.+++.... ..+++..+..++.|++.|++|||. |+.||+||||||+||+++ .++.+||+|||+|
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999996 58988887643 568999999999999999999942 368999999999999995 4788999999999
Q ss_pred cccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 774 KLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 774 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
+..... .....+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 209 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 209 CQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 876432 23467899999999999999999999999999999999999999763
No 279
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.97 E-value=1.1e-31 Score=286.75 Aligned_cols=203 Identities=26% Similarity=0.419 Sum_probs=168.6
Q ss_pred HhcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcC--CCcccceeeeeecCCeeEE
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQL--EGALESFNAECEVLRSIR--HRNLVRIISSCTNDDFKAL 699 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~l 699 (851)
..++|++.+.||+|+||.||+|++.+++.||+|++.... ....+.+.+|++++++++ ||||+++++++.+.+..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 456799999999999999999998889999999997543 334577899999999997 5999999999999999999
Q ss_pred EEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCC
Q 046438 700 VLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~ 779 (851)
||| +.+++|.+++... ..+++..+..++.||++|++|| |++||+||||||+||+++ ++.+||+|||+++.....
T Consensus 106 v~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 179 (313)
T ss_dssp EEC-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC----
T ss_pred EEe-cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCcccEEEE-CCeEEEeeccccccccCc
Confidence 999 5688999998654 4688899999999999999999 888999999999999996 489999999999876433
Q ss_pred CC-ccccccccCccccCcccccc-----------CCCCcchhhHHHHHHHHHHHhCCCCCCccCc
Q 046438 780 ES-MKHTQTLATIGYMAPEYGRE-----------GQISTEGDVYSFGIMLMEIFTRKRPTDEIFS 832 (851)
Q Consensus 780 ~~-~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 832 (851)
.. .......+++.|+|||++.+ ..++.++||||+||++|||++|+.||.....
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 244 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH
Confidence 22 12234578999999999865 4788899999999999999999999976543
No 280
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.97 E-value=8e-32 Score=314.42 Aligned_cols=202 Identities=27% Similarity=0.468 Sum_probs=171.6
Q ss_pred hcCCCccceeccccceEEEEEEEcC----CcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLD----GMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKAL 699 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 699 (851)
.++|++.+.||+|+||+||+|++.. +..||+|+++... ....+.+.+|+.++++++||||+++++++.+ +..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceEE
Confidence 4678999999999999999998843 4569999987543 3344678999999999999999999999854 56899
Q ss_pred EEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCC
Q 046438 700 VLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~ 779 (851)
||||+++|+|.+++......+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 9999999999999987766789999999999999999999 7889999999999999999999999999999876544
Q ss_pred CCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 780 ESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 780 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
.........+|+.|+|||++.+..++.++||||+||++|||++ |+.||.+.
T Consensus 545 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 596 (656)
T 2j0j_A 545 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596 (656)
T ss_dssp ---------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence 3333334567889999999998899999999999999999997 99999764
No 281
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.97 E-value=1.8e-31 Score=281.28 Aligned_cols=201 Identities=23% Similarity=0.393 Sum_probs=173.9
Q ss_pred HHhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch--hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEE
Q 046438 623 QATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE--GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKAL 699 (851)
Q Consensus 623 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 699 (851)
...++|++.+.||+|+||.||+|++. +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34578999999999999999999985 689999999975432 345778999999999999999999999999999999
Q ss_pred EEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCC---CcEEEeeccCcccc
Q 046438 700 VLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDED---MVARLGDFGIAKLL 776 (851)
Q Consensus 700 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~---~~~kl~Dfg~a~~~ 776 (851)
||||+++++|.+++... ..+++..++.++.||+.|++|| |++||+||||+|+||+++.+ +.+||+|||++...
T Consensus 99 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 99 VGELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYM---HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp EECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEEccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 99999999998887543 4688999999999999999999 88899999999999999754 47999999999866
Q ss_pred CCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 777 SGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 777 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.... ......+++.|+|||++.+ .++.++||||+|+++|+|++|+.||...
T Consensus 175 ~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~ 225 (287)
T 2wei_A 175 QQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK 225 (287)
T ss_dssp CCCS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCC
Confidence 4332 2233468999999998875 4899999999999999999999999764
No 282
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.97 E-value=1.9e-31 Score=290.06 Aligned_cols=195 Identities=26% Similarity=0.352 Sum_probs=165.9
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCe-----
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDF----- 696 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 696 (851)
.++|.+.+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467999999999999999999984 58999999997543 2335678899999999999999999999987653
Q ss_pred -eEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccc
Q 046438 697 -KALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKL 775 (851)
Q Consensus 697 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~ 775 (851)
.++||||++ ++|.+++. ..+++..+..++.||++|++|| |++||+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~L---H~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYI---HSAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 57877663 3488999999999999999999 788999999999999999999999999999976
Q ss_pred cCCCCCccccccccCccccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 776 LSGDESMKHTQTLATIGYMAPEYGRE-GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 776 ~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 176 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 227 (353)
T 3coi_A 176 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 227 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred CCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 5322 234578999999999876 67899999999999999999999999763
No 283
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.97 E-value=8.7e-32 Score=312.92 Aligned_cols=195 Identities=28% Similarity=0.485 Sum_probs=164.4
Q ss_pred ceeccccceEEEEEEEc---CCcEEEEEEEeecch--hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEeccCC
Q 046438 632 NLIGSGSFGSVYRGRFL---DGMEVAIKVFHLQLE--GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLDYMPK 706 (851)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 706 (851)
+.||+|+||+||+|.+. .++.||||+++.... ...+.+.+|++++++++|||||++++++.+ +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999763 367899999976532 335789999999999999999999999965 457899999999
Q ss_pred CChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCc--cc
Q 046438 707 GSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESM--KH 784 (851)
Q Consensus 707 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~ 784 (851)
|+|.+++.. ...+++..+..++.||+.|++|| |++||+||||||+||+++.++.+||+|||+|+........ ..
T Consensus 454 g~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~yL---H~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHH---HHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 999999864 45688999999999999999999 7889999999999999999999999999999876543321 22
Q ss_pred cccccCccccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 785 TQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 785 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
....+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+..
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~ 577 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 577 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 23456789999999999999999999999999999998 999997643
No 284
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.97 E-value=3e-31 Score=289.10 Aligned_cols=197 Identities=23% Similarity=0.333 Sum_probs=169.3
Q ss_pred hcCCCccceeccccceEEEEEEEc-CC-cEEEEEEEeecchhhHHHHHHHHHHHhhcCCCc------ccceeeeeecCCe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DG-MEVAIKVFHLQLEGALESFNAECEVLRSIRHRN------LVRIISSCTNDDF 696 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~ 696 (851)
.++|++.+.||+|+||+||+|++. ++ +.||+|+++.. ....+.+.+|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 468999999999999999999884 34 68999999754 334567889999999998766 8899999999999
Q ss_pred eEEEEeccCCCChhHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE----------------
Q 046438 697 KALVLDYMPKGSLEACLYSD-NSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL---------------- 759 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill---------------- 759 (851)
.++||||+ ++++.+++... ...+++..+..++.||+.|++|| |++||+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~l---H~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFL---HENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 55565555443 45789999999999999999999 88999999999999999
Q ss_pred ---CCCCcEEEeeccCccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 760 ---DEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 760 ---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 56789999999999864322 23457899999999999999999999999999999999999999764
No 285
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=1.4e-31 Score=305.68 Aligned_cols=200 Identities=29% Similarity=0.434 Sum_probs=171.7
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeec------CCe
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTN------DDF 696 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~ 696 (851)
.++|++.+.||+|+||+||+|++. +|+.||+|+++... ....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 368999999999999999999874 58899999987543 3345678999999999999999999998765 667
Q ss_pred eEEEEeccCCCChhHHhhcCC--CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCc---EEEeecc
Q 046438 697 KALVLDYMPKGSLEACLYSDN--SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMV---ARLGDFG 771 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~---~kl~Dfg 771 (851)
.++||||+++|+|.+++.... ..+++..++.++.|++.|++|| |++||+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yL---Hs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL---HENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHH---HHTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999987633 3588889999999999999999 7889999999999999987664 9999999
Q ss_pred CccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 772 IAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 772 ~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
.+....... ......+|+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~ 225 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 998764332 23446799999999999999999999999999999999999999965
No 286
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=2.5e-31 Score=284.95 Aligned_cols=200 Identities=27% Similarity=0.337 Sum_probs=153.6
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch--hhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEEe
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE--GALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 702 (851)
++|++.+.||+|+||.||+|++. +|+.||+|+++.... ...+.+.++..+++.++||||+++++++.+.+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 57899999999999999999985 689999999976532 223345555667888899999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCC-CcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPN-PVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~-~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
|+ ++.+..+.......+++..+..++.|+++|++|| |++ ||+||||||+||+++.++.+||+|||++.......
T Consensus 105 ~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (318)
T 2dyl_A 105 LM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYL---KEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK- 179 (318)
T ss_dssp CC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH---HHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred cc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH---HhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc-
Confidence 99 5666666554466789999999999999999999 664 99999999999999999999999999997654322
Q ss_pred ccccccccCccccCccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 782 MKHTQTLATIGYMAPEYGR-----EGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
......+++.|+|||++. ...++.++||||+||++|||++|+.||....
T Consensus 180 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 233 (318)
T 2dyl_A 180 -AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK 233 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred -cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC
Confidence 223456899999999984 5578899999999999999999999997643
No 287
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=3.1e-31 Score=285.73 Aligned_cols=198 Identities=22% Similarity=0.327 Sum_probs=146.8
Q ss_pred HhcCCCccc-eeccccceEEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcccceeeeeec----CCee
Q 046438 624 ATDQFNVNN-LIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNLVRIISSCTN----DDFK 697 (851)
Q Consensus 624 ~~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~ 697 (851)
..++|++.+ .||+|+||+||+|++. +++.||+|++.... ....+....++.++||||+++++++.. ....
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 356798865 6999999999999985 68999999987532 222233344666799999999999876 4468
Q ss_pred EEEEeccCCCChhHHhhcCC-CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC---CCcEEEeeccCc
Q 046438 698 ALVLDYMPKGSLEACLYSDN-SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE---DMVARLGDFGIA 773 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~---~~~~kl~Dfg~a 773 (851)
++||||+++|+|.+++.... ..+++..++.++.|++.|++|| |++||+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~L---H~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFL---HSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 99999999999999987643 4689999999999999999999 8889999999999999976 456999999999
Q ss_pred cccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccC
Q 046438 774 KLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIF 831 (851)
Q Consensus 774 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 831 (851)
+..... ......+|+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 179 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 233 (336)
T 3fhr_A 179 KETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT 233 (336)
T ss_dssp EEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred eecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence 865432 2234568999999999988889999999999999999999999996543
No 288
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.97 E-value=9.4e-32 Score=287.27 Aligned_cols=205 Identities=26% Similarity=0.352 Sum_probs=164.0
Q ss_pred HHHHHHHhcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecchh------hHHHHHHHHHHHhhc----CCCcccc
Q 046438 618 YQELLQATDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLEG------ALESFNAECEVLRSI----RHRNLVR 686 (851)
Q Consensus 618 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~h~niv~ 686 (851)
..+.....++|++.+.||+|+||.||+|++ .+++.||+|+++..... ....+.+|++++.++ +||||++
T Consensus 23 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~ 102 (312)
T 2iwi_A 23 GKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIR 102 (312)
T ss_dssp ----------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCC
T ss_pred ccchhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeee
Confidence 344555678899999999999999999987 46889999998754321 223456789999888 8999999
Q ss_pred eeeeeecCCeeEEEEec-cCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEEC-CCCc
Q 046438 687 IISSCTNDDFKALVLDY-MPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLD-EDMV 764 (851)
Q Consensus 687 ~~~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~-~~~~ 764 (851)
+++++.+.+..++|||+ +++++|.+++... ..+++..++.++.||++|++|| |++||+||||||+||+++ .++.
T Consensus 103 ~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~ 178 (312)
T 2iwi_A 103 LLDWFETQEGFMLVLERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHC---HSRGVVHRDIKDENILIDLRRGC 178 (312)
T ss_dssp EEEEC-----CEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHH---HHHTEECCCCSGGGEEEETTTTE
T ss_pred EEEEEecCCeEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCChhhEEEeCCCCe
Confidence 99999999999999999 7899999998653 4688999999999999999999 788999999999999999 8899
Q ss_pred EEEeeccCccccCCCCCccccccccCccccCccccccCCCC-cchhhHHHHHHHHHHHhCCCCCCc
Q 046438 765 ARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQIS-TEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 765 ~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~g~~pf~~ 829 (851)
+||+|||+++..... ......+++.|+|||++.+..+. .++||||+||++|||++|+.||..
T Consensus 179 ~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 241 (312)
T 2iwi_A 179 AKLIDFGSGALLHDE---PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241 (312)
T ss_dssp EEECCCSSCEECCSS---CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred EEEEEcchhhhcccC---cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence 999999999876433 23345689999999998877664 589999999999999999999975
No 289
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.97 E-value=7.2e-32 Score=289.25 Aligned_cols=201 Identities=28% Similarity=0.459 Sum_probs=168.1
Q ss_pred HhcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEEE
Q 046438 624 ATDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 624 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 701 (851)
..++|++.+.||+|+||.||+|++.+ .||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35789999999999999999998743 59999987543 223356778999999999999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCC--
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGD-- 779 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~-- 779 (851)
||+++++|.+++......+++..+..++.||++|++|| |++||+||||||+||+++ ++.+||+|||+++.....
T Consensus 109 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL---HAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp BCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHH---HHTTCCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred ecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 99999999999977666789999999999999999999 788999999999999998 679999999998754321
Q ss_pred --CCccccccccCccccCcccccc---------CCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 780 --ESMKHTQTLATIGYMAPEYGRE---------GQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 780 --~~~~~~~~~~t~~y~aPE~~~~---------~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.........|++.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 246 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ 246 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 1112233468999999998864 45788999999999999999999999764
No 290
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.97 E-value=1e-31 Score=287.74 Aligned_cols=202 Identities=26% Similarity=0.334 Sum_probs=172.4
Q ss_pred HHHHhcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecchh------hHHHHHHHHHHHhhcC--CCcccceeeee
Q 046438 621 LLQATDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLEG------ALESFNAECEVLRSIR--HRNLVRIISSC 691 (851)
Q Consensus 621 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~~~~~~ 691 (851)
.....++|++.+.||+|+||.||+|++. +++.||+|+++..... ..+.+.+|++++++++ ||||+++++++
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~ 117 (320)
T 3a99_A 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 117 (320)
T ss_dssp --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence 3345678999999999999999999874 6889999999765321 2245678999999996 59999999999
Q ss_pred ecCCeeEEEEeccCC-CChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEEC-CCCcEEEee
Q 046438 692 TNDDFKALVLDYMPK-GSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLD-EDMVARLGD 769 (851)
Q Consensus 692 ~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~-~~~~~kl~D 769 (851)
.+.+..++|||++.+ ++|.+++.. ...+++..++.++.||++|++|| |++||+||||||+||+++ +++.+||+|
T Consensus 118 ~~~~~~~lv~e~~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~~kL~D 193 (320)
T 3a99_A 118 ERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHC---HNCGVLHRDIKDENILIDLNRGELKLID 193 (320)
T ss_dssp ECSSEEEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTTEEEECC
T ss_pred ecCCcEEEEEEcCCCCccHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHH---HHCCcEeCCCCHHHEEEeCCCCCEEEee
Confidence 999999999999976 899998865 35688999999999999999999 888999999999999999 789999999
Q ss_pred ccCccccCCCCCccccccccCccccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCc
Q 046438 770 FGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQI-STEGDVYSFGIMLMEIFTRKRPTDE 829 (851)
Q Consensus 770 fg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~pf~~ 829 (851)
||+++..... ......+|+.|+|||++.+..+ +.++|||||||++|||++|+.||..
T Consensus 194 fg~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 251 (320)
T 3a99_A 194 FGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251 (320)
T ss_dssp CTTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred Cccccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCC
Confidence 9999876432 2234568999999999887766 6788999999999999999999975
No 291
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=3.9e-31 Score=294.99 Aligned_cols=199 Identities=25% Similarity=0.404 Sum_probs=157.6
Q ss_pred cCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCeeEEEEecc
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSI-RHRNLVRIISSCTNDDFKALVLDYM 704 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 704 (851)
+.|.+.+.||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++.+.+..++||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 3455668899999999987766789999999987542 35678899999886 8999999999999999999999999
Q ss_pred CCCChhHHhhcCCCC------cCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCC-------------CcE
Q 046438 705 PKGSLEACLYSDNSN------LDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDED-------------MVA 765 (851)
Q Consensus 705 ~~g~L~~~l~~~~~~------~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~-------------~~~ 765 (851)
+ |+|.+++...... ..+..++.++.||+.|++|| |++||+||||||+||+++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL---HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence 5 6999998654321 12334577999999999999 78899999999999999654 489
Q ss_pred EEeeccCccccCCCCCc---cccccccCccccCcccccc-------CCCCcchhhHHHHHHHHHHHh-CCCCCCccC
Q 046438 766 RLGDFGIAKLLSGDESM---KHTQTLATIGYMAPEYGRE-------GQISTEGDVYSFGIMLMEIFT-RKRPTDEIF 831 (851)
Q Consensus 766 kl~Dfg~a~~~~~~~~~---~~~~~~~t~~y~aPE~~~~-------~~~~~~~DvwslG~il~el~~-g~~pf~~~~ 831 (851)
||+|||+|+........ ......||+.|+|||++.+ ..++.++||||+||++|||++ |+.||....
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 99999999876543221 1234579999999999865 678999999999999999999 999997643
No 292
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=4.3e-32 Score=292.99 Aligned_cols=192 Identities=18% Similarity=0.193 Sum_probs=160.1
Q ss_pred hcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecch--------hhHHHHHHHHHHHhhcC----------------
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLE--------GALESFNAECEVLRSIR---------------- 680 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~---------------- 680 (851)
.++|++.+.||+|+||+||+|++ +|+.||+|+++.... ...+.+.+|+++++.++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35689999999999999999998 789999999986531 23367889999998886
Q ss_pred ----------CCcccceeeeeec-------------CCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHH
Q 046438 681 ----------HRNLVRIISSCTN-------------DDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALE 737 (851)
Q Consensus 681 ----------h~niv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ 737 (851)
||||+++++++.+ .+..++||||+++|++.+.+.. ..+++..+..++.||+.|++
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 5555555555554 6789999999999976655533 56789999999999999999
Q ss_pred HHHhcC-CCCcEecCCCCCCEEECCCC--------------------cEEEeeccCccccCCCCCccccccccCccccCc
Q 046438 738 YLHFGH-PNPVVHCDIKPSNVLLDEDM--------------------VARLGDFGIAKLLSGDESMKHTQTLATIGYMAP 796 (851)
Q Consensus 738 ~L~~~h-~~~ivH~Dl~~~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aP 796 (851)
|| | ++||+||||||+||+++.++ .+||+|||+|+..... ...||+.|+||
T Consensus 176 ~l---H~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VA---EASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDE 246 (336)
T ss_dssp HH---HHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCS
T ss_pred HH---HHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccCh
Confidence 99 7 88999999999999999887 9999999999876422 34799999999
Q ss_pred cccccCCCCcchhhHHHHHH-HHHHHhCCCCCCc
Q 046438 797 EYGREGQISTEGDVYSFGIM-LMEIFTRKRPTDE 829 (851)
Q Consensus 797 E~~~~~~~~~~~DvwslG~i-l~el~~g~~pf~~ 829 (851)
|++.+.. +.++||||+|++ .+++++|..||..
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~ 279 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN 279 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcc
Confidence 9998766 889999998777 7888999999854
No 293
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.97 E-value=3.6e-31 Score=290.51 Aligned_cols=197 Identities=19% Similarity=0.338 Sum_probs=167.9
Q ss_pred hcCCCccceeccccceEEEEEEE-cCCcEEEEEEEeecchhhHHHHHHHHHHHhhcC-----------CCcccceeeeee
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLEGALESFNAECEVLRSIR-----------HRNLVRIISSCT 692 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~ 692 (851)
.++|++.+.||+|+||+||+|++ .+++.||+|+++... ...+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 36799999999999999999998 468899999997542 33467888999998886 889999999987
Q ss_pred cCC----eeEEEEeccCCCChhHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCC-CcEecCCCCCCEEEC------
Q 046438 693 NDD----FKALVLDYMPKGSLEACLYSD-NSNLDIFKRLNIVIDIALALEYLHFGHPN-PVVHCDIKPSNVLLD------ 760 (851)
Q Consensus 693 ~~~----~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~L~~~h~~-~ivH~Dl~~~Nill~------ 760 (851)
..+ ..++||||+ +++|.+++... ...+++..+..++.||+.|++|| |++ ||+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l---H~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYM---HRRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHH---HHTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHH---HhcCCEEecCCChHHeEEeccCCCc
Confidence 654 789999999 88999988763 45589999999999999999999 777 999999999999994
Q ss_pred CCCcEEEeeccCccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 761 EDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 761 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
..+.+||+|||+++..... .....+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 238 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238 (373)
T ss_dssp TEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred CcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 4458999999999875422 23457899999999999999999999999999999999999999754
No 294
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=3.9e-31 Score=293.88 Aligned_cols=198 Identities=21% Similarity=0.357 Sum_probs=160.4
Q ss_pred cCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCeeEEEEecc
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSI-RHRNLVRIISSCTNDDFKALVLDYM 704 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 704 (851)
.+|++.+.||+|+||+||.....+++.||||++..... ..+.+|+++++.+ +||||+++++++.+....++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 46888999999999997665556899999999865322 2356899999999 7999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC-----CCcEEEeeccCccccCCC
Q 046438 705 PKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE-----DMVARLGDFGIAKLLSGD 779 (851)
Q Consensus 705 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~-----~~~~kl~Dfg~a~~~~~~ 779 (851)
+ |+|.+++...........+..++.||+.|++|| |++||+||||||+||+++. ...+||+|||+|+.....
T Consensus 101 ~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 101 A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL---HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHH---HHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHH---HHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 6 599999877665566666788999999999999 8889999999999999953 336889999999876432
Q ss_pred CC--ccccccccCccccCccccc---cCCCCcchhhHHHHHHHHHHHh-CCCCCCcc
Q 046438 780 ES--MKHTQTLATIGYMAPEYGR---EGQISTEGDVYSFGIMLMEIFT-RKRPTDEI 830 (851)
Q Consensus 780 ~~--~~~~~~~~t~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~-g~~pf~~~ 830 (851)
.. .......||+.|+|||++. ...++.++||||+||++|||++ |+.||...
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~ 233 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS 233 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBST
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchh
Confidence 21 2233467999999999987 4567889999999999999999 99999653
No 295
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=8.9e-31 Score=309.09 Aligned_cols=193 Identities=25% Similarity=0.354 Sum_probs=166.0
Q ss_pred hcCCCccceeccccceEEEEEEEc--CCcEEEEEEEeecc-hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCe-----
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL--DGMEVAIKVFHLQL-EGALESFNAECEVLRSIRHRNLVRIISSCTNDDF----- 696 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 696 (851)
.++|++.+.||+|+||+||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999985 58999999986543 3344678899999999999999999999987654
Q ss_pred eEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCcccc
Q 046438 697 KALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 697 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
.|+||||++|++|.+++.. .+++..+..++.||++||+|| |++||+||||||+||+++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~l---H~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYL---HSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHH---HHCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 6999999999999887643 689999999999999999999 88899999999999999886 8999999999876
Q ss_pred CCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 777 SGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 777 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
... ....||+.|+|||++.+. ++.++|||||||++|||++|..||...
T Consensus 232 ~~~-----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~ 279 (681)
T 2pzi_A 232 NSF-----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGR 279 (681)
T ss_dssp TCC-----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTE
T ss_pred ccC-----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccc
Confidence 432 345799999999998765 488999999999999999999998754
No 296
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2e-30 Score=275.98 Aligned_cols=272 Identities=21% Similarity=0.225 Sum_probs=224.9
Q ss_pred EEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCC--cCccccCCCCCcEEEc
Q 046438 266 VLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGS--IPSTLSRLEKLQILGL 343 (851)
Q Consensus 266 ~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~L 343 (851)
.++++++.+.. +|..+ +.++++|++++|+++...+..|.++++|++|++++|.++.. .+..+..+++|++|++
T Consensus 11 ~l~c~~~~l~~--ip~~~---~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 11 EIRCNSKGLTS--VPTGI---PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EEECCSSCCSS--CCSCC---CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred EEEcCCCCccc--CCCCC---CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 44555555432 33322 23677788888888755555688999999999999998733 2567778999999999
Q ss_pred ccccccccccccccccCCCCEEEccCcccCCCCC-ccccCCccccceecccCcCccC-chhhcccCcceEEEecCCCCCC
Q 046438 344 ENNQLEGRILDDICRLARLSSVYLDHNKLSGSIP-ACFGNLASLRKLSFASNELTFV-PSTFWNLTNILMVDLSSNPLSG 421 (851)
Q Consensus 344 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~-p~~~~~l~~L~~L~Ls~N~l~~ 421 (851)
++|.++. .+..+..+++|++|++++|++.+..+ ..+..+++|++|++++|+++.+ +..+..+++|++|++++|.+++
T Consensus 86 s~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 86 SFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp CSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 9999984 56678899999999999999987655 6889999999999999999854 5678889999999999999986
Q ss_pred -CCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCcccc
Q 046438 422 -SLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLE 500 (851)
Q Consensus 422 -~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 500 (851)
..|..+..+++|++|++++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|..+.
T Consensus 165 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 244 (306)
T 2z66_A 165 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 244 (306)
T ss_dssp GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCC
T ss_pred ccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHH
Confidence 5788999999999999999999988899999999999999999999987788899999999999999999999999999
Q ss_pred ccc-cccceeccCccccccCCCCC---cccccCcccccCCcCccCCC
Q 046438 501 KLL-YLKYLNVSFNRLEGEIPRGG---TLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 501 ~l~-~L~~l~l~~N~l~~~~p~~~---~~~~l~~~~~~~n~~~c~~~ 543 (851)
.++ +|+.|++++|+|+|+++... ++..........+...|..|
T Consensus 245 ~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 245 HFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATP 291 (306)
T ss_dssp CCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEES
T ss_pred hhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCc
Confidence 995 99999999999999987542 33334444456677788776
No 297
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=4.4e-30 Score=287.88 Aligned_cols=252 Identities=23% Similarity=0.294 Sum_probs=223.1
Q ss_pred ccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEc
Q 046438 264 LKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGL 343 (851)
Q Consensus 264 L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 343 (851)
.+.++.+++.+. .+|..+. .+++.|+|++|+|++..+..|.++++|++|+|++|.+.+..+..|.++++|++|+|
T Consensus 45 ~~~v~c~~~~l~--~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 45 FSKVICVRKNLR--EVPDGIS---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp SCEEECCSCCCS--SCCSCCC---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCEEEeCCCCcC--cCCCCCC---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 345555555553 3444333 46788888888888888889999999999999999999888889999999999999
Q ss_pred ccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceeccc-CcCccCch-hhcccCcceEEEecCCCCCC
Q 046438 344 ENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFAS-NELTFVPS-TFWNLTNILMVDLSSNPLSG 421 (851)
Q Consensus 344 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~p~-~~~~l~~L~~L~Ls~N~l~~ 421 (851)
++|++++..+..|..+++|+.|+|++|++.+..+..|..+++|++|++++ |.+..++. .|.++++|++|+|++|.++
T Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~- 198 (440)
T 3zyj_A 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR- 198 (440)
T ss_dssp CSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-
T ss_pred CCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-
Confidence 99999988888899999999999999999988888999999999999998 56777765 6889999999999999998
Q ss_pred CCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccc
Q 046438 422 SLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEK 501 (851)
Q Consensus 422 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 501 (851)
.+| .+..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..+..+..
T Consensus 199 ~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 277 (440)
T 3zyj_A 199 EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 277 (440)
T ss_dssp SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSS
T ss_pred ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcc
Confidence 555 4888999999999999999888999999999999999999999888999999999999999999999888888999
Q ss_pred cccccceeccCccccccCCCC
Q 046438 502 LLYLKYLNVSFNRLEGEIPRG 522 (851)
Q Consensus 502 l~~L~~l~l~~N~l~~~~p~~ 522 (851)
+++|+.|+|++|+|.|+|...
T Consensus 278 l~~L~~L~L~~Np~~CdC~l~ 298 (440)
T 3zyj_A 278 LHHLERIHLHHNPWNCNCDIL 298 (440)
T ss_dssp CTTCCEEECCSSCEECSSTTH
T ss_pred ccCCCEEEcCCCCccCCCCch
Confidence 999999999999999999754
No 298
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=4.3e-30 Score=270.37 Aligned_cols=232 Identities=25% Similarity=0.252 Sum_probs=175.7
Q ss_pred cCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcc-cCCCCCccccCCcccccee
Q 046438 312 INLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNK-LSGSIPACFGNLASLRKLS 390 (851)
Q Consensus 312 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~ 390 (851)
++|++|++++|.+++..+..|..+++|++|++++|.+++..+..+..+++|++|++++|+ +....+..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 466666777766665555666677777777777777776666667777777777777775 6655566777777777777
Q ss_pred cccCcCccC-chhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCC
Q 046438 391 FASNELTFV-PSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQG 469 (851)
Q Consensus 391 L~~N~l~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 469 (851)
+++|+++.+ |..+..+++|++|++++|++++..+..|+.+++|++|++++|++++..+..|..+++|+.|++++|++++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 777777766 4456777778888888888876666667788888888888888886656678888888888888888887
Q ss_pred CCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCCcccccCcccccCCcCccCCC
Q 046438 470 SIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGTLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 470 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~~ 543 (851)
..|..|+.+++|+.|+|++|++++..+..+..+++|+.|++++|+|+|+++....+.++.......+...|..|
T Consensus 192 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p 265 (285)
T 1ozn_A 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLP 265 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEES
T ss_pred cCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCc
Confidence 77888888888888888888888766677888888888888888888888766556666666666777777766
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=3.1e-30 Score=280.38 Aligned_cols=261 Identities=19% Similarity=0.208 Sum_probs=169.6
Q ss_pred CCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCcccccccc
Q 046438 210 KLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLS 289 (851)
Q Consensus 210 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~ 289 (851)
+|+.|++++|.++++.+..|.++++|++|++++|.++.+.. ..+..+++|++|++++|++
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-----~~~~~l~~L~~L~Ls~n~l--------------- 112 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEE-----DSFSSLGSLEHLDLSYNYL--------------- 112 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECT-----TTTTTCTTCCEEECCSSCC---------------
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCH-----hhcCCCCCCCEEECCCCcC---------------
Confidence 45555555555555544455555555555555555543221 1233333333333333332
Q ss_pred ccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcC-ccccCCCCCcEEEcccc-cccccccccccccCCCCEEEc
Q 046438 290 MERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIP-STLSRLEKLQILGLENN-QLEGRILDDICRLARLSSVYL 367 (851)
Q Consensus 290 L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L 367 (851)
++..+..+..+++|++|++++|++++..+ ..+..+++|++|++++| .+++..+..+..+++|+.|++
T Consensus 113 -----------~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l 181 (353)
T 2z80_A 113 -----------SNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEI 181 (353)
T ss_dssp -----------SSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEE
T ss_pred -----------CcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEEC
Confidence 22233446777888888888888875444 46778888888888887 466666667777778888888
Q ss_pred cCcccCCCCCccccCCccccceecccCcCccCchhh-cccCcceEEEecCCCCCCCCccccccchhhhhhhccCCccccc
Q 046438 368 DHNKLSGSIPACFGNLASLRKLSFASNELTFVPSTF-WNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGD 446 (851)
Q Consensus 368 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 446 (851)
++|++.+..|..|..+++|++|++++|+++.+|..+ ..+++|+.|++++|++++..+..+..
T Consensus 182 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~----------------- 244 (353)
T 2z80_A 182 DASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST----------------- 244 (353)
T ss_dssp EETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC---------------------
T ss_pred CCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc-----------------
Confidence 888877777777777777777777777777776643 34677777777777776543332211
Q ss_pred CCcccCCCCCccEEEccCcccCC----CCcccccCCCCCCEEECCCCcccccCCcc-ccccccccceeccCccccccCCC
Q 046438 447 IPTTIGGLKNLQNLSLGDNNLQG----SIPNSIGDLISLECLDLSNNILSGIIPSS-LEKLLYLKYLNVSFNRLEGEIPR 521 (851)
Q Consensus 447 ~~~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~l~l~~N~l~~~~p~ 521 (851)
......++.++|++|.+++ .+|..+..+++|+.|+|++|+++. +|.. |..+++|+.|++++|+|+|++|.
T Consensus 245 ----~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 245 ----GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp ------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ----ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCc-cCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 1223456666666666654 467788889999999999999984 5544 68899999999999999999884
Q ss_pred CC
Q 046438 522 GG 523 (851)
Q Consensus 522 ~~ 523 (851)
..
T Consensus 320 l~ 321 (353)
T 2z80_A 320 ID 321 (353)
T ss_dssp HH
T ss_pred cH
Confidence 43
No 300
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.96 E-value=8.9e-30 Score=267.28 Aligned_cols=174 Identities=16% Similarity=0.135 Sum_probs=151.9
Q ss_pred hcCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecc---hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 625 TDQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQL---EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 625 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
.++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 367999999999999999999985 48999999997653 23346789999999999999999999999999999999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||++|++|.+++... ....++..++.|+++|++|| |++||+||||||+||+++.++.+||+++|.
T Consensus 110 ~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~l---H~~givH~Dikp~NIll~~~g~~kl~~~~~-------- 175 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAA---HRAGVALSIDHPSRVRVSIDGDVVLAYPAT-------- 175 (286)
T ss_dssp EECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEEETTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHH---HHCCCccCCCCcccEEEcCCCCEEEEeccc--------
Confidence 9999999999998432 35567888999999999999 888999999999999999999999985542
Q ss_pred CccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccCc
Q 046438 781 SMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFS 832 (851)
Q Consensus 781 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 832 (851)
++ .++.++|||||||++|||++|+.||.+...
T Consensus 176 -------------~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~ 207 (286)
T 3uqc_A 176 -------------MP-------DANPQDDIRGIGASLYALLVNRWPLPEAGV 207 (286)
T ss_dssp -------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSB
T ss_pred -------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 22 368899999999999999999999987543
No 301
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=6.7e-32 Score=315.64 Aligned_cols=408 Identities=16% Similarity=0.117 Sum_probs=197.0
Q ss_pred CCcchhcCCcccccccccccccc---cCCCcccc------------CCCCccEEeccccccccccchhhcCc--ccccEE
Q 046438 79 LPANIFSYLPFVQFLSLAFNQFA---GHLPREIG------------NLTSLTSIDLSENHLMGEIPHEIGNL--RNLQAL 141 (851)
Q Consensus 79 ~~~~~~~~l~~L~~L~L~~N~i~---~~~~~~l~------------~l~~L~~L~Ls~n~l~~~~~~~~~~l--~~L~~L 141 (851)
.|..++..+++|++|+|+++... +.+|..++ .+++|++|+|++|.+++..+..+... .+|++|
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L 143 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETL 143 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEE
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEE
Confidence 34445556666666666554321 12222222 56777777777777765555555553 347777
Q ss_pred EccCccc-cC-CCCccccCCCcCcEEEeecccccccc---chhHhhhccccccccccccccc----ccCCccccccCCCc
Q 046438 142 GLLSNNL-VG-VVPATLFNISTLKILQLTNNTLSGSI---SSSIRLALPNLELFSLANNNFS----GKIPSFIFNASKLS 212 (851)
Q Consensus 142 ~L~~n~l-~~-~~~~~l~~l~~L~~L~L~~n~l~~~~---~~~~~~~l~~L~~L~L~~N~i~----~~~~~~~~~~~~L~ 212 (851)
++++|.- .. ..+....++++|++|+|++|.+++.. ...+...+++|++|++++|.++ +.++..+.++++|+
T Consensus 144 ~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~ 223 (592)
T 3ogk_B 144 KLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLV 223 (592)
T ss_dssp EEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCC
T ss_pred ECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCc
Confidence 7776651 11 01112235677777777777765442 2224446677777777777765 23334445667777
Q ss_pred EEecCCCCCccccCccccCCCCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccE
Q 046438 213 ICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMER 292 (851)
Q Consensus 213 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~ 292 (851)
.|++++|.+.++ +..+..+++|++|+++.+..... .......+..+++|+.|+++++.. ..+|..+... .+|++
T Consensus 224 ~L~L~~~~~~~l-~~~~~~~~~L~~L~l~~~~~~~~--~~~~~~~l~~~~~L~~L~l~~~~~--~~l~~~~~~~-~~L~~ 297 (592)
T 3ogk_B 224 SVKVGDFEILEL-VGFFKAAANLEEFCGGSLNEDIG--MPEKYMNLVFPRKLCRLGLSYMGP--NEMPILFPFA-AQIRK 297 (592)
T ss_dssp EEECSSCBGGGG-HHHHHHCTTCCEEEECBCCCCTT--CTTSSSCCCCCTTCCEEEETTCCT--TTGGGGGGGG-GGCCE
T ss_pred EEeccCccHHHH-HHHHhhhhHHHhhcccccccccc--hHHHHHHhhccccccccCccccch--hHHHHHHhhc-CCCcE
Confidence 777777776653 35666777777777764322110 011223455556666666665422 2233333222 24555
Q ss_pred EEeecCccccCCC-cccccccCCcEEEecCCCCC-CCcCccccCCCCCcEEEccc-----------cccccccccc-ccc
Q 046438 293 FYLHNCNIRGSIP-KEMGNLINLIIIRLGYNKLN-GSIPSTLSRLEKLQILGLEN-----------NQLEGRILDD-ICR 358 (851)
Q Consensus 293 L~L~~n~i~~~~p-~~l~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~-----------n~l~~~~~~~-~~~ 358 (851)
|++++|.+++... ..+..+++|+.|+++ +.+. +.++..+..+++|++|++++ |.+++..... ...
T Consensus 298 L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~ 376 (592)
T 3ogk_B 298 LDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQG 376 (592)
T ss_dssp EEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHH
T ss_pred EecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhh
Confidence 5555555432222 223445555555555 2222 11222223445555555552 3333222211 223
Q ss_pred cCCCCEEEccCcccCCCCCccccC-Cccccceecc----cCcCccCc------hhhcccCcceEEEecCCC--CCCCCcc
Q 046438 359 LARLSSVYLDHNKLSGSIPACFGN-LASLRKLSFA----SNELTFVP------STFWNLTNILMVDLSSNP--LSGSLPL 425 (851)
Q Consensus 359 l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~p------~~~~~l~~L~~L~Ls~N~--l~~~~p~ 425 (851)
+++|+.|+++.|++++..+..+.. +++|+.|+++ .|+++..| ..+.++++|++|++++|. +++..+.
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~ 456 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLS 456 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHH
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHH
Confidence 455555555555554433333333 4455555553 34444321 223445555555554322 3333222
Q ss_pred cccc-chhhhhhhccCCccccc-CCcccCCCCCccEEEccCcccCCC-CcccccCCCCCCEEECCCCcccc
Q 046438 426 EIGN-LKVLVELYLSRNNLSGD-IPTTIGGLKNLQNLSLGDNNLQGS-IPNSIGDLISLECLDLSNNILSG 493 (851)
Q Consensus 426 ~~~~-l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~ 493 (851)
.+.. +++|++|++++|++++. ++..+..+++|+.|+|++|.+++. ++..+..+++|++|+|++|++++
T Consensus 457 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 457 YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 2222 44455555555555431 233334455555555555554322 22223344555555555555543
No 302
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.2e-29 Score=283.15 Aligned_cols=252 Identities=23% Similarity=0.284 Sum_probs=225.3
Q ss_pred ccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEc
Q 046438 264 LKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGL 343 (851)
Q Consensus 264 L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 343 (851)
...++.+++.+.. +|..+ +.+++.|+|++|+|++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 56 ~~~v~c~~~~l~~--iP~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 56 FSKVVCTRRGLSE--VPQGI---PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SCEEECCSSCCSS--CCSCC---CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CcEEEECCCCcCc--cCCCC---CCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 3455566655532 44433 247888999999998888999999999999999999999888899999999999999
Q ss_pred ccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceeccc-CcCccCch-hhcccCcceEEEecCCCCCC
Q 046438 344 ENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFAS-NELTFVPS-TFWNLTNILMVDLSSNPLSG 421 (851)
Q Consensus 344 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~p~-~~~~l~~L~~L~Ls~N~l~~ 421 (851)
++|.+++..+..|..+++|+.|+|++|++.+..+..|..+++|++|++++ |.++.++. .+.++++|++|+|++|++++
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 99999988888899999999999999999988888999999999999998 67777765 68899999999999999995
Q ss_pred CCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccc
Q 046438 422 SLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEK 501 (851)
Q Consensus 422 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 501 (851)
+| .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..+..
T Consensus 211 -~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 211 -MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp -CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred -cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 44 5889999999999999999888999999999999999999999888999999999999999999999888888999
Q ss_pred cccccceeccCccccccCCCC
Q 046438 502 LLYLKYLNVSFNRLEGEIPRG 522 (851)
Q Consensus 502 l~~L~~l~l~~N~l~~~~p~~ 522 (851)
+++|+.|+|++|+|.|+|...
T Consensus 289 l~~L~~L~L~~Np~~CdC~~~ 309 (452)
T 3zyi_A 289 LRYLVELHLHHNPWNCDCDIL 309 (452)
T ss_dssp CTTCCEEECCSSCEECSTTTH
T ss_pred ccCCCEEEccCCCcCCCCCch
Confidence 999999999999999999754
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=276.12 Aligned_cols=280 Identities=19% Similarity=0.193 Sum_probs=167.0
Q ss_pred CCCCEEEcCCCcccccccCCCCCCCcEEeCCCCCCCCCCCcchhcCCcccccccccccccccCCCccccCCCCccEEecc
Q 046438 41 NTLEILDLSNNQLSGSFPFFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLS 120 (851)
Q Consensus 41 ~~L~~L~Ls~n~l~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls 120 (851)
+.....++++|+++.+ |..-.++|++|++++|+++ .++...|..+++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 31 ~~~~~c~~~~~~l~~i-P~~~~~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (353)
T 2z80_A 31 DRNGICKGSSGSLNSI-PSGLTEAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108 (353)
T ss_dssp CTTSEEECCSTTCSSC-CTTCCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCeEeeCCCCCcccc-cccccccCcEEECCCCcCc-ccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECC
Confidence 3334455555555532 2233345666666666665 4555556666777777777777666666667777777777777
Q ss_pred ccccccccchhhcCcccccEEEccCccccCCCC-ccccCCCcCcEEEeeccc-cccccchhHhhhccccccccccccccc
Q 046438 121 ENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVP-ATLFNISTLKILQLTNNT-LSGSISSSIRLALPNLELFSLANNNFS 198 (851)
Q Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~~l~~L~~L~L~~N~i~ 198 (851)
+|.+++..+..|+++++|++|++++|++.+..+ ..+.++++|++|++++|. +. .++...+..+++|++|++++|+++
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~~~~~l~~L~~L~l~~n~l~ 187 (353)
T 2z80_A 109 YNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT-KIQRKDFAGLTFLEELEIDASDLQ 187 (353)
T ss_dssp SSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC-EECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccc-ccCHHHccCCCCCCEEECCCCCcC
Confidence 777775545557777777777777777775444 466677777777777774 43 444444456666666777666666
Q ss_pred ccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCC
Q 046438 199 GKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCV 278 (851)
Q Consensus 199 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 278 (851)
+..|..+.++++|+.|++++|.++.+.+..+..+++|++|++++|.++..+... +........
T Consensus 188 ~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~--l~~~~~~~~--------------- 250 (353)
T 2z80_A 188 SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSE--LSTGETNSL--------------- 250 (353)
T ss_dssp EECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC--------CCCC---------------
T ss_pred ccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccc--cccccccch---------------
Confidence 666666666666666666666666555445555666777777777666543211 111112222
Q ss_pred CCCccccccccccEEEeecCcccc----CCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEccccccccc
Q 046438 279 LPSSIGNLSLSMERFYLHNCNIRG----SIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGR 351 (851)
Q Consensus 279 ~p~~~~~~~~~L~~L~L~~n~i~~----~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 351 (851)
++.++++++.+.+ .+|..+..+++|+.|++++|+++...+..|..+++|++|++++|++.+.
T Consensus 251 -----------l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 251 -----------IKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp -----------CCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred -----------hhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 3334444444332 3455666677777777777777643333356667777777777766643
No 304
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=4.3e-29 Score=267.47 Aligned_cols=224 Identities=24% Similarity=0.292 Sum_probs=183.7
Q ss_pred cccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEcc
Q 046438 289 SMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLD 368 (851)
Q Consensus 289 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 368 (851)
.++.|++++|+++ .+|..+..+++|++|++++|.+. .+|..+..+++|++|+|++|.++ .+|..+..+++|+.|+++
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 4455555555555 45556666667777777777666 56666666777777777777766 456666667777777777
Q ss_pred CcccCCCCCcccc---------CCccccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhcc
Q 046438 369 HNKLSGSIPACFG---------NLASLRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLS 439 (851)
Q Consensus 369 ~N~l~~~~~~~~~---------~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 439 (851)
+|++.+.+|..+. .+++|++|++++|+++.+|..+..+++|++|+|++|+++ .+|..++.+++|++|+|+
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls 237 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLR 237 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECT
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECc
Confidence 7666666666554 489999999999999999999999999999999999999 466789999999999999
Q ss_pred CCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCcccc
Q 046438 440 RNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLE 516 (851)
Q Consensus 440 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~ 516 (851)
+|++.+.+|..|+.+++|+.|+|++|++.+.+|..+.++++|++|+|++|++.+.+|..+..+++|+.+++..|.+.
T Consensus 238 ~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 238 GCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988665
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.3e-29 Score=269.82 Aligned_cols=212 Identities=25% Similarity=0.285 Sum_probs=151.1
Q ss_pred cccCCcEEEecCCCCCCCcCccccCCCCCcEEEccccccccccc-ccccccCCCCEEEccCcccCCCCCccccCCccccc
Q 046438 310 NLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRIL-DDICRLARLSSVYLDHNKLSGSIPACFGNLASLRK 388 (851)
Q Consensus 310 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 388 (851)
.+++|++|++++|.+. .+|..+..+++|++|++++|.+++..+ ..+..+++|+.|++++|.+.+..+..|..+++|++
T Consensus 76 ~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 154 (306)
T 2z66_A 76 GTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 154 (306)
T ss_dssp SCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCE
T ss_pred cccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCE
Confidence 3444444444444444 233345555555555555555554433 34555666666666666666566666667777777
Q ss_pred eecccCcCcc--CchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcc
Q 046438 389 LSFASNELTF--VPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNN 466 (851)
Q Consensus 389 L~L~~N~l~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 466 (851)
|++++|+++. +|..+..+++|++|+|++|++++..|..|..+++|++|++++|++++..+..+..+++|+.|+|++|+
T Consensus 155 L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 234 (306)
T 2z66_A 155 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 234 (306)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSC
T ss_pred EECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCC
Confidence 7777777764 56777778888888888888887778888888888888888888887667788899999999999999
Q ss_pred cCCCCcccccCCC-CCCEEECCCCcccccCC--ccccccccccceeccCccccccCCCC
Q 046438 467 LQGSIPNSIGDLI-SLECLDLSNNILSGIIP--SSLEKLLYLKYLNVSFNRLEGEIPRG 522 (851)
Q Consensus 467 l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p--~~l~~l~~L~~l~l~~N~l~~~~p~~ 522 (851)
+++..|..+..++ +|++|+|++|++++.-+ .....+...+.+.++.+.+.|..|..
T Consensus 235 l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~ 293 (306)
T 2z66_A 235 IMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSD 293 (306)
T ss_dssp CCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGG
T ss_pred CcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchh
Confidence 9988899999884 99999999999986432 22333556667788889999988853
No 306
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.96 E-value=5.3e-29 Score=263.97 Aligned_cols=175 Identities=23% Similarity=0.362 Sum_probs=151.1
Q ss_pred hcCCCcc-ceeccccceEEEEEEE-cCCcEEEEEEEeecchhhHHHHHHHHHHH-hhcCCCcccceeeeeec----CCee
Q 046438 625 TDQFNVN-NLIGSGSFGSVYRGRF-LDGMEVAIKVFHLQLEGALESFNAECEVL-RSIRHRNLVRIISSCTN----DDFK 697 (851)
Q Consensus 625 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~----~~~~ 697 (851)
.++|.+. +.||+|+||.||+|++ .+++.||+|+++.. ..+.+|++++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3567777 7899999999999998 46889999998643 4567888887 55689999999999876 6688
Q ss_pred EEEEeccCCCChhHHhhcCC-CCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC---CCcEEEeeccCc
Q 046438 698 ALVLDYMPKGSLEACLYSDN-SNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE---DMVARLGDFGIA 773 (851)
Q Consensus 698 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~---~~~~kl~Dfg~a 773 (851)
++||||+++|+|.+++.... ..+++..++.++.|++.|++|| |++||+||||||+||+++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL---HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999987643 4689999999999999999999 8889999999999999998 789999999998
Q ss_pred cccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 046438 774 KLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEI 830 (851)
Q Consensus 774 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 830 (851)
.... +..++.++||||+||++|||++|+.||...
T Consensus 168 ~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~ 201 (299)
T 3m2w_A 168 KETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSN 201 (299)
T ss_dssp EECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-
T ss_pred cccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 6542 134678899999999999999999999654
No 307
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.96 E-value=1.1e-29 Score=281.44 Aligned_cols=197 Identities=16% Similarity=0.196 Sum_probs=154.0
Q ss_pred cCCCccceeccccceEEEEEEEc-CCcEEEEEEEeecch---hhHHHHHHHHHHHhhcCC-Cccccee------------
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE---GALESFNAECEVLRSIRH-RNLVRII------------ 688 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h-~niv~~~------------ 688 (851)
..|...+.||+|+||+||+|++. +|+.||||+++.... ...+.+.+|+.+++.++| ++...+.
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 34777899999999999999974 689999999874322 235779999999999987 3221111
Q ss_pred ---------eeeec-----CCeeEEEEeccCCCChhHHhh------cCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcE
Q 046438 689 ---------SSCTN-----DDFKALVLDYMPKGSLEACLY------SDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVV 748 (851)
Q Consensus 689 ---------~~~~~-----~~~~~lv~e~~~~g~L~~~l~------~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~iv 748 (851)
.++.. ....+++|+++ +++|.+++. .....+++..+..++.||++|++|| |++||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASL---HHYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHH---HHTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHH---HhCCcc
Confidence 11111 12456777766 688988873 2344577788899999999999999 888999
Q ss_pred ecCCCCCCEEECCCCcEEEeeccCccccCCCCCccccccccCccccCcccc----------ccCCCCcchhhHHHHHHHH
Q 046438 749 HCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYG----------REGQISTEGDVYSFGIMLM 818 (851)
Q Consensus 749 H~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~----------~~~~~~~~~DvwslG~il~ 818 (851)
||||||+||+++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999998765322 334567 999999998 5566889999999999999
Q ss_pred HHHhCCCCCCccC
Q 046438 819 EIFTRKRPTDEIF 831 (851)
Q Consensus 819 el~~g~~pf~~~~ 831 (851)
||++|+.||....
T Consensus 309 elltg~~Pf~~~~ 321 (413)
T 3dzo_A 309 WIWCADLPNTDDA 321 (413)
T ss_dssp HHHHSSCCCCTTG
T ss_pred HHHHCCCCCCCcc
Confidence 9999999997643
No 308
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=6.3e-31 Score=307.37 Aligned_cols=407 Identities=15% Similarity=0.099 Sum_probs=303.2
Q ss_pred CCCccccCCCCccEEeccccccc---cccchh------------hcCcccccEEEccCccccCCCCccccC-CC-cCcEE
Q 046438 103 HLPREIGNLTSLTSIDLSENHLM---GEIPHE------------IGNLRNLQALGLLSNNLVGVVPATLFN-IS-TLKIL 165 (851)
Q Consensus 103 ~~~~~l~~l~~L~~L~Ls~n~l~---~~~~~~------------~~~l~~L~~L~L~~n~l~~~~~~~l~~-l~-~L~~L 165 (851)
..+..+..+++|++|+|++|... +.+|.. +..+++|++|+|++|.+++..+..+.. ++ +|++|
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L 143 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETL 143 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEE
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEE
Confidence 33455677899999999886431 122322 237899999999999887666666655 34 49999
Q ss_pred Eeeccc-cccccchhHhhhccccccccccccccccc----CCccccccCCCcEEecCCCCCcc----ccCccccCCCCcc
Q 046438 166 QLTNNT-LSGSISSSIRLALPNLELFSLANNNFSGK----IPSFIFNASKLSICELPDNSFSG----FIPNRFHNMRNLK 236 (851)
Q Consensus 166 ~L~~n~-l~~~~~~~~~~~l~~L~~L~L~~N~i~~~----~~~~~~~~~~L~~L~L~~n~l~~----~~~~~~~~l~~L~ 236 (851)
+|++|. ++......+...+++|++|+|++|.+++. ++..+.++++|+.|++++|.+++ ..+..+.++++|+
T Consensus 144 ~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~ 223 (592)
T 3ogk_B 144 KLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLV 223 (592)
T ss_dssp EEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCC
T ss_pred ECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCc
Confidence 999987 33223334445789999999999998776 33455678999999999999973 3344567889999
Q ss_pred eEeccCccccCCCCcchhhhhccccccccEEeccCCCcc--CCCCCCccccccccccEEEeecCccccCCCcccccccCC
Q 046438 237 ELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLL--DCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINL 314 (851)
Q Consensus 237 ~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~--~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L 314 (851)
+|++++|.+..+ ...+..+++|+.|+++.+... ....+..+... .+|+.+.++++.. ..+|..+..+++|
T Consensus 224 ~L~L~~~~~~~l------~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~-~~L~~L~l~~~~~-~~l~~~~~~~~~L 295 (592)
T 3ogk_B 224 SVKVGDFEILEL------VGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFP-RKLCRLGLSYMGP-NEMPILFPFAAQI 295 (592)
T ss_dssp EEECSSCBGGGG------HHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCC-TTCCEEEETTCCT-TTGGGGGGGGGGC
T ss_pred EEeccCccHHHH------HHHHhhhhHHHhhcccccccccchHHHHHHhhcc-ccccccCccccch-hHHHHHHhhcCCC
Confidence 999999988753 345778899999999853321 12233344444 4899999988644 3678888999999
Q ss_pred cEEEecCCCCCCCcC-ccccCCCCCcEEEccccccccc-ccccccccCCCCEEEccC-----------cccCCC-CCccc
Q 046438 315 IIIRLGYNKLNGSIP-STLSRLEKLQILGLENNQLEGR-ILDDICRLARLSSVYLDH-----------NKLSGS-IPACF 380 (851)
Q Consensus 315 ~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~-----------N~l~~~-~~~~~ 380 (851)
++|++++|.+++... ..+..+++|++|+++ +.+.+. .+.....+++|+.|++++ |.+++. ++..+
T Consensus 296 ~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~ 374 (592)
T 3ogk_B 296 RKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALA 374 (592)
T ss_dssp CEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHH
T ss_pred cEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHH
Confidence 999999999765443 346889999999999 445433 333446789999999993 566533 22334
Q ss_pred cCCccccceecccCcCcc-Cchhhcc-cCcceEEEec----CCCCCCC-----CccccccchhhhhhhccCCc--ccccC
Q 046438 381 GNLASLRKLSFASNELTF-VPSTFWN-LTNILMVDLS----SNPLSGS-----LPLEIGNLKVLVELYLSRNN--LSGDI 447 (851)
Q Consensus 381 ~~l~~L~~L~L~~N~l~~-~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~L~~N~--l~~~~ 447 (851)
..+++|++|+++.|+++. .+..+.. +++|+.|+++ .|.+++. ++..+.++++|+.|++++|. +++..
T Consensus 375 ~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~ 454 (592)
T 3ogk_B 375 QGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLG 454 (592)
T ss_dssp HHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHH
T ss_pred hhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHH
Confidence 568999999999999983 3445554 8999999996 7788853 33446778999999998543 66655
Q ss_pred CcccC-CCCCccEEEccCcccCC-CCcccccCCCCCCEEECCCCccccc-CCccccccccccceeccCcccccc
Q 046438 448 PTTIG-GLKNLQNLSLGDNNLQG-SIPNSIGDLISLECLDLSNNILSGI-IPSSLEKLLYLKYLNVSFNRLEGE 518 (851)
Q Consensus 448 ~~~~~-~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~l~l~~N~l~~~ 518 (851)
+..+. .+++|+.|+|++|++++ .++..+..+++|++|+|++|.+++. ++.....+++|+.|++++|+++..
T Consensus 455 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 455 LSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 55554 48899999999999986 3456678899999999999998754 455567899999999999998764
No 309
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=4e-28 Score=259.95 Aligned_cols=225 Identities=20% Similarity=0.302 Sum_probs=196.6
Q ss_pred ccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEE
Q 046438 262 KKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQIL 341 (851)
Q Consensus 262 ~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 341 (851)
++++.|++++|.+. .+|..++.+. .|+.|++++|+++ .+|..++.+++|++|++++|.++ .+|..+..+++|++|
T Consensus 81 ~~l~~L~L~~n~l~--~lp~~l~~l~-~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 81 PGRVALELRSVPLP--QFPDQAFRLS-HLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TTCCEEEEESSCCS--SCCSCGGGGT-TCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cceeEEEccCCCch--hcChhhhhCC-CCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 45566666666663 4566666543 6777777777777 67788888888888888888888 668888888888888
Q ss_pred Ecccccccccccccccc---------cCCCCEEEccCcccCCCCCccccCCccccceecccCcCccCchhhcccCcceEE
Q 046438 342 GLENNQLEGRILDDICR---------LARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPSTFWNLTNILMV 412 (851)
Q Consensus 342 ~L~~n~l~~~~~~~~~~---------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L 412 (851)
++++|++.+..|..+.. +++|+.|+|++|+++ .+|..+..+++|++|++++|+++.+|..+..+++|++|
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEE
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEE
Confidence 88888887777776654 999999999999999 78888999999999999999999999999999999999
Q ss_pred EecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCccc
Q 046438 413 DLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILS 492 (851)
Q Consensus 413 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 492 (851)
+|++|.+.+.+|..++.+++|++|++++|++.+.+|..++.+++|+.|+|++|++.+.+|..++.+++|+.+++..|.+.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988776
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.8e-28 Score=256.50 Aligned_cols=252 Identities=25% Similarity=0.276 Sum_probs=216.8
Q ss_pred cEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcc
Q 046438 265 KVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLE 344 (851)
Q Consensus 265 ~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 344 (851)
++++.+++.+.. +|..+ +.++++|++++|++++..+..|..+++|++|++++|.+++..|..|..+++|++|+++
T Consensus 14 ~~~~c~~~~l~~--ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 88 (285)
T 1ozn_A 14 VTTSCPQQGLQA--VPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLS 88 (285)
T ss_dssp CEEECCSSCCSS--CCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred eEEEcCcCCccc--CCcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCC
Confidence 445555555532 33322 3467888888888887777889999999999999999998888999999999999999
Q ss_pred ccc-ccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccCch-hhcccCcceEEEecCCCCCCC
Q 046438 345 NNQ-LEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPS-TFWNLTNILMVDLSSNPLSGS 422 (851)
Q Consensus 345 ~n~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~-~~~~l~~L~~L~Ls~N~l~~~ 422 (851)
+|. ++...+..+..+++|++|++++|++.+..+..|..+++|++|++++|+++.++. .+..+++|+.|+|++|++++.
T Consensus 89 ~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 168 (285)
T 1ozn_A 89 DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV 168 (285)
T ss_dssp SCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccccc
Confidence 997 887778899999999999999999998889999999999999999999998876 478899999999999999977
Q ss_pred CccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCcccccc
Q 046438 423 LPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKL 502 (851)
Q Consensus 423 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 502 (851)
.+..|..+++|++|++++|++++..|..|..+++|+.|++++|++++..+..+..+++|+.|+|++|++....+.. ...
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~ 247 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLW 247 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHH
T ss_pred CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHH
Confidence 7778999999999999999999888999999999999999999999877788999999999999999998644322 334
Q ss_pred ccccceeccCccccccCCCC
Q 046438 503 LYLKYLNVSFNRLEGEIPRG 522 (851)
Q Consensus 503 ~~L~~l~l~~N~l~~~~p~~ 522 (851)
..++.+..+.|.+.|..|..
T Consensus 248 ~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 248 AWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp HHHHHCCSEECCCBEEESGG
T ss_pred HHHHhcccccCccccCCchH
Confidence 56777888999999999864
No 311
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=4.6e-28 Score=271.41 Aligned_cols=250 Identities=23% Similarity=0.281 Sum_probs=226.4
Q ss_pred cccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEcc
Q 046438 289 SMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLD 368 (851)
Q Consensus 289 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 368 (851)
....++..+++++ .+|..+. ++++.|+|++|.+.+..+..|.++++|++|+|++|.+++..+..|..+++|+.|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4567888999998 6676665 689999999999998888999999999999999999999888999999999999999
Q ss_pred CcccCCCCCccccCCccccceecccCcCccCch-hhcccCcceEEEecCC-CCCCCCccccccchhhhhhhccCCccccc
Q 046438 369 HNKLSGSIPACFGNLASLRKLSFASNELTFVPS-TFWNLTNILMVDLSSN-PLSGSLPLEIGNLKVLVELYLSRNNLSGD 446 (851)
Q Consensus 369 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~-~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 446 (851)
+|++++..+..|..+++|++|+|++|+++.+|. .+..+++|+.|+|++| .+....+..|.++++|++|+|++|+++ .
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~ 199 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-E 199 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-S
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-c
Confidence 999998888899999999999999999998876 7889999999999994 555445557999999999999999999 5
Q ss_pred CCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCC-Ccc
Q 046438 447 IPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRG-GTL 525 (851)
Q Consensus 447 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~-~~~ 525 (851)
+| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+.. ..+
T Consensus 200 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 200 IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 66 4899999999999999999888999999999999999999999999999999999999999999999777654 457
Q ss_pred cccCcccccCCcCccCCC
Q 046438 526 ANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 526 ~~l~~~~~~~n~~~c~~~ 543 (851)
..+..+.+.+||+.|++.
T Consensus 279 ~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 279 HHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp TTCCEEECCSSCEECSST
T ss_pred cCCCEEEcCCCCccCCCC
Confidence 888899999999999875
No 312
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=2.4e-29 Score=284.16 Aligned_cols=217 Identities=18% Similarity=0.178 Sum_probs=183.5
Q ss_pred cccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEcc
Q 046438 289 SMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLD 368 (851)
Q Consensus 289 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 368 (851)
+|+.|+|++|++++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|+.|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 68888888888888778889999999999999999986655 8889999999999999986443 3889999999
Q ss_pred CcccCCCCCccccCCccccceecccCcCccC-chhhcccCcceEEEecCCCCCCCCccccc-cchhhhhhhccCCccccc
Q 046438 369 HNKLSGSIPACFGNLASLRKLSFASNELTFV-PSTFWNLTNILMVDLSSNPLSGSLPLEIG-NLKVLVELYLSRNNLSGD 446 (851)
Q Consensus 369 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~ 446 (851)
+|.+.+..+. .+++|+.|+|++|+++.+ |..+..+++|+.|+|++|.+++..|..+. .+++|+.|+|++|.|++.
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 9999876554 357899999999999976 45788899999999999999988888876 789999999999999865
Q ss_pred CCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccC
Q 046438 447 IPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEI 519 (851)
Q Consensus 447 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~ 519 (851)
|. +..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|+|++ +|..+..+++|+.|++++|++.|..
T Consensus 185 -~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~ 253 (487)
T 3oja_A 185 -KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGT 253 (487)
T ss_dssp -EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHH
T ss_pred -cc-cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcc
Confidence 33 4468999999999999986 44458899999999999999995 7778889999999999999998543
No 313
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.4e-29 Score=269.78 Aligned_cols=202 Identities=20% Similarity=0.200 Sum_probs=158.8
Q ss_pred cccCCcEEEecCCCCCCCcCccc--cCCCCCcEEEccccccccccccccccc-----CCCCEEEccCcccCCCCCccccC
Q 046438 310 NLINLIIIRLGYNKLNGSIPSTL--SRLEKLQILGLENNQLEGRILDDICRL-----ARLSSVYLDHNKLSGSIPACFGN 382 (851)
Q Consensus 310 ~l~~L~~L~L~~n~l~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~ 382 (851)
++++|++|++++|.+++..|..+ ..+++|++|++++|.+++. |..+..+ ++|++|+|++|++.+..+..|+.
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 57778888888888877777765 7788888888888888866 6666666 78888888888888777788888
Q ss_pred CccccceecccCcCcc---Cchhh--cccCcceEEEecCCCCCCC--Cc-cccccchhhhhhhccCCcccccCC-cccCC
Q 046438 383 LASLRKLSFASNELTF---VPSTF--WNLTNILMVDLSSNPLSGS--LP-LEIGNLKVLVELYLSRNNLSGDIP-TTIGG 453 (851)
Q Consensus 383 l~~L~~L~L~~N~l~~---~p~~~--~~l~~L~~L~Ls~N~l~~~--~p-~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~ 453 (851)
+++|++|++++|++.. +|..+ ..+++|++|+|++|++++. .+ ..+..+++|++|++++|++++..| ..+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 8888888888888653 34444 7788888888888888731 12 334567888888888888887664 45677
Q ss_pred CCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccc
Q 046438 454 LKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEG 517 (851)
Q Consensus 454 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~ 517 (851)
+++|++|+|++|+|+ .+|..+. ++|++|||++|+|++. |. +..+++|+.|++++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 889999999999998 7777776 8899999999999865 65 8889999999999999875
No 314
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.3e-27 Score=268.72 Aligned_cols=245 Identities=21% Similarity=0.228 Sum_probs=160.0
Q ss_pred CCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhcCCccccccccc
Q 046438 19 LQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLA 96 (851)
Q Consensus 19 L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~ 96 (851)
...++.+++.++ .+|..+. ++|++|+|++|++++..+ +..+++|++|+|++|+++ .++...|.++++|++|+|+
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR-QIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECC
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccC-CcChhhccCcccCCEEECC
Confidence 456666666666 4554443 566777777777665433 566677777777777766 4555556667777777777
Q ss_pred ccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccC-ccccCCCCccccCCCcCcEEEeeccccccc
Q 046438 97 FNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLS-NNLVGVVPATLFNISTLKILQLTNNTLSGS 175 (851)
Q Consensus 97 ~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 175 (851)
+|++++..+..|.++++|++|+|++|.++...+..|.++++|++|++++ |.+....+..|.++++|+.|+|++|++++
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~- 210 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD- 210 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-
Confidence 7777666566666677777777777777655555666777777777766 34444444456667777777777777663
Q ss_pred cchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCCcchhh
Q 046438 176 ISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFI 255 (851)
Q Consensus 176 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 255 (851)
++. +..+++|++|+|++|.+++..|..+.++++|+.|+|++|.++++.+..|.++++|++|+|++|+++.++.+
T Consensus 211 ~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---- 284 (452)
T 3zyi_A 211 MPN--LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHD---- 284 (452)
T ss_dssp CCC--CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT----
T ss_pred ccc--ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChH----
Confidence 332 33566777777777777766666777777777777777777777677777777777777777777665432
Q ss_pred hhccccccccEEeccCCCcc
Q 046438 256 SSLANSKKLKVLSLTGNPLL 275 (851)
Q Consensus 256 ~~l~~l~~L~~L~Ls~N~l~ 275 (851)
.+..+++|+.|+|++|++.
T Consensus 285 -~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 285 -LFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp -SSTTCTTCCEEECCSSCEE
T ss_pred -HhccccCCCEEEccCCCcC
Confidence 3455667777777777664
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.3e-28 Score=263.01 Aligned_cols=267 Identities=20% Similarity=0.226 Sum_probs=186.5
Q ss_pred cCcEEEeeccccccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEec
Q 046438 161 TLKILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNL 240 (851)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 240 (851)
+++.++++.+.+. ..+..++..+++|++|+|++|++++..|..+.++++|+.|+|++|.+++..+ |..+++|++|++
T Consensus 11 ~l~i~~ls~~~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 11 RYKIEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp EEEEESCCTTTHH-HHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred ceeEeeccccchh-hhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 4556667777665 4555566677788888888888887777788888888888888888887654 888888999999
Q ss_pred cCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEec
Q 046438 241 EYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLG 320 (851)
Q Consensus 241 ~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~ 320 (851)
++|+++.++ ..++|++|++++|++..... . ...+|+.|++++|++++..+..+..+++|++|+++
T Consensus 88 s~n~l~~l~----------~~~~L~~L~l~~n~l~~~~~--~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls 152 (317)
T 3o53_A 88 NNNYVQELL----------VGPSIETLHAANNNISRVSC--S---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLK 152 (317)
T ss_dssp CSSEEEEEE----------ECTTCCEEECCSSCCSEEEE--C---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECT
T ss_pred cCCcccccc----------CCCCcCEEECCCCccCCcCc--c---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECC
Confidence 998887532 34788888888888754221 1 12357777777777776666677777777777777
Q ss_pred CCCCCCCcCcccc-CCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccC
Q 046438 321 YNKLNGSIPSTLS-RLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFV 399 (851)
Q Consensus 321 ~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 399 (851)
+|.+.+..+..+. .+++|++|++++|.+++.. ....+++|+.|+|++|++++. |..+..+++|++|++++|+++.+
T Consensus 153 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~~l 229 (317)
T 3o53_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVLI 229 (317)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCEE
T ss_pred CCCCCcccHHHHhhccCcCCEEECCCCcCcccc--cccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCcccch
Confidence 7777766665553 5677777777777777542 223467777777777777743 33466777777777777777777
Q ss_pred chhhcccCcceEEEecCCCCC-CCCccccccchhhhhhhccC-CcccccCC
Q 046438 400 PSTFWNLTNILMVDLSSNPLS-GSLPLEIGNLKVLVELYLSR-NNLSGDIP 448 (851)
Q Consensus 400 p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~-N~l~~~~~ 448 (851)
|..+..+++|+.|++++|++. +.+|..+..+++|+.|++++ +.+++..|
T Consensus 230 ~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 230 EKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp CTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred hhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 777777777777777777776 55666667777777777773 33444333
No 316
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.95 E-value=1.3e-30 Score=304.91 Aligned_cols=406 Identities=16% Similarity=0.122 Sum_probs=202.1
Q ss_pred hcCCcccccccccccccccCCCcccc-CCCCccEEecccc-ccccc-cchhhcCcccccEEEccCccccCCCCcccc---
Q 046438 84 FSYLPFVQFLSLAFNQFAGHLPREIG-NLTSLTSIDLSEN-HLMGE-IPHEIGNLRNLQALGLLSNNLVGVVPATLF--- 157 (851)
Q Consensus 84 ~~~l~~L~~L~L~~N~i~~~~~~~l~-~l~~L~~L~Ls~n-~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~--- 157 (851)
+..+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|++++|.+++..+..+.
T Consensus 101 ~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~ 180 (594)
T 2p1m_B 101 SSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP 180 (594)
T ss_dssp HHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSC
T ss_pred HHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHh
Confidence 34556666666666666654444443 4667777777776 34322 344445667777777777776655444333
Q ss_pred -CCCcCcEEEeeccc--cccccchhHhhhcccccccccccc-cccccCCccccccCCCcEEecCCC-------CCccccC
Q 046438 158 -NISTLKILQLTNNT--LSGSISSSIRLALPNLELFSLANN-NFSGKIPSFIFNASKLSICELPDN-------SFSGFIP 226 (851)
Q Consensus 158 -~l~~L~~L~L~~n~--l~~~~~~~~~~~l~~L~~L~L~~N-~i~~~~~~~~~~~~~L~~L~L~~n-------~l~~~~~ 226 (851)
.+++|+.|++++|. ++......+...+++|++|++++| .+++ ++..+..+++|+.|++..+ .+.++.
T Consensus 181 ~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~- 258 (594)
T 2p1m_B 181 DTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLS- 258 (594)
T ss_dssp TTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHH-
T ss_pred hcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHH-
Confidence 45577777777775 322222233334577777777776 3333 5555666677777764433 233322
Q ss_pred ccccCCCCcceE-eccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccC-C
Q 046438 227 NRFHNMRNLKEL-NLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGS-I 304 (851)
Q Consensus 227 ~~~~~l~~L~~L-~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~-~ 304 (851)
..+.++++|+.| .+.+..... +...+..+++|++|++++|.+.+..++..+... ++|++|++++| +... +
T Consensus 259 ~~l~~~~~L~~Ls~~~~~~~~~------l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~-~~L~~L~l~~~-~~~~~l 330 (594)
T 2p1m_B 259 VALSGCKELRCLSGFWDAVPAY------LPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQC-PKLQRLWVLDY-IEDAGL 330 (594)
T ss_dssp HHHHTCTTCCEEECCBTCCGGG------GGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTC-TTCCEEEEEGG-GHHHHH
T ss_pred HHHhcCCCcccccCCcccchhh------HHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcC-CCcCEEeCcCc-cCHHHH
Confidence 255666666666 333322111 112233456666666666664322111111111 24555555544 2211 1
Q ss_pred CcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEccccccccccccccc-ccCCCCEEEccCcccCCCCCcccc-C
Q 046438 305 PKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDIC-RLARLSSVYLDHNKLSGSIPACFG-N 382 (851)
Q Consensus 305 p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~-~ 382 (851)
+.....+++|+.|++.++.-.| ..+.+.+++.....+. .+++|+.|+++.|.+++.....+. .
T Consensus 331 ~~l~~~~~~L~~L~L~~~~~~g---------------~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~ 395 (594)
T 2p1m_B 331 EVLASTCKDLRELRVFPSEPFV---------------MEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARN 395 (594)
T ss_dssp HHHHHHCTTCCEEEEECSCTTC---------------SSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred HHHHHhCCCCCEEEEecCcccc---------------cccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhh
Confidence 1111234555555552210000 0011222222222222 234444444444444332222222 2
Q ss_pred Cccccceecc--c----CcCccCc------hhhcccCcceEEEecCCCCCCCCcccccc-chhhhhhhccCCcccccCCc
Q 046438 383 LASLRKLSFA--S----NELTFVP------STFWNLTNILMVDLSSNPLSGSLPLEIGN-LKVLVELYLSRNNLSGDIPT 449 (851)
Q Consensus 383 l~~L~~L~L~--~----N~l~~~p------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~~~ 449 (851)
+++|+.|+++ + |.++..| ..+..+++|+.|+|++ .+++..+..++. +++|++|+|++|.+++..+.
T Consensus 396 ~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~ 474 (594)
T 2p1m_B 396 RPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMH 474 (594)
T ss_dssp CTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHH
T ss_pred CCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHH
Confidence 4444455444 2 3333222 2244566667777755 454444444443 56667777777766544443
Q ss_pred cc-CCCCCccEEEccCcccCCCCcc-cccCCCCCCEEECCCCcccccCCccc-cccccccceeccCccc
Q 046438 450 TI-GGLKNLQNLSLGDNNLQGSIPN-SIGDLISLECLDLSNNILSGIIPSSL-EKLLYLKYLNVSFNRL 515 (851)
Q Consensus 450 ~~-~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~l~l~~N~l 515 (851)
.+ ..+++|+.|+|++|++++.... ....+++|+.|++++|+++......+ ..+|+|+...+..+.-
T Consensus 475 ~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 475 HVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp HHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred HHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 33 5567777777777777543332 33446777777777777754333333 4456666655555543
No 317
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=7e-29 Score=264.38 Aligned_cols=249 Identities=20% Similarity=0.225 Sum_probs=196.6
Q ss_pred ccCCCCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccc-------cccccccEEEeecCccc
Q 046438 229 FHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIG-------NLSLSMERFYLHNCNIR 301 (851)
Q Consensus 229 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~-------~~~~~L~~L~L~~n~i~ 301 (851)
++..++|++|++++|.+ .++.. +.. .|+.|++++|++....+|..+. .+ .+|++|++++|+++
T Consensus 39 ~~~~~~L~~l~l~~n~l-~~p~~------~~~--~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l-~~L~~L~L~~n~l~ 108 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE-ADLGQ------FTD--IIKSLSLKRLTVRAARIPSRILFGALRVLGI-SGLQELTLENLEVT 108 (312)
T ss_dssp EEEEEECTTHHHHCCTT-CCCHH------HHH--HHHHCCCCEEEEEEEECBHHHHHHHHHHHTT-SCCCEEEEEEEBCB
T ss_pred EccCCCceeEeeccccc-ccHHH------HHH--HHhhcccccccccCCCcCHHHHHHHHHhcCc-CCccEEEccCCccc
Confidence 44455666666666666 33321 111 1566666666665455555443 23 37888888888888
Q ss_pred cCCCccc--ccccCCcEEEecCCCCCCCcCccccCC-----CCCcEEEcccccccccccccccccCCCCEEEccCcccCC
Q 046438 302 GSIPKEM--GNLINLIIIRLGYNKLNGSIPSTLSRL-----EKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSG 374 (851)
Q Consensus 302 ~~~p~~l--~~l~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 374 (851)
+.+|..+ ..+++|++|++++|++++. |..+..+ ++|++|++++|++++..+..+..+++|+.|++++|++.+
T Consensus 109 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 187 (312)
T 1wwl_A 109 GTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELG 187 (312)
T ss_dssp SCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCH
T ss_pred chhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCc
Confidence 8888876 8899999999999999877 7777776 899999999999998888899999999999999999765
Q ss_pred C--CCccc--cCCccccceecccCcCccCch----hhcccCcceEEEecCCCCCCCCc-cccccchhhhhhhccCCcccc
Q 046438 375 S--IPACF--GNLASLRKLSFASNELTFVPS----TFWNLTNILMVDLSSNPLSGSLP-LEIGNLKVLVELYLSRNNLSG 445 (851)
Q Consensus 375 ~--~~~~~--~~l~~L~~L~L~~N~l~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~ 445 (851)
. .+..+ ..+++|++|++++|+++.++. .+..+++|++|+|++|++++..| ..+..+++|++|+|++|+|+
T Consensus 188 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~- 266 (312)
T 1wwl_A 188 ERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK- 266 (312)
T ss_dssp HHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-
T ss_pred chHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-
Confidence 4 23333 889999999999999995542 34578999999999999998775 45677899999999999999
Q ss_pred cCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccc
Q 046438 446 DIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSG 493 (851)
Q Consensus 446 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 493 (851)
.+|..+. ++|++|+|++|+|++. |. +..+++|++|+|++|++++
T Consensus 267 ~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 267 QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 7888776 8999999999999965 66 9999999999999999985
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=9.9e-27 Score=267.75 Aligned_cols=268 Identities=24% Similarity=0.308 Sum_probs=142.4
Q ss_pred CCcEEeCCCCCCCCCCCcchhcCCcccccccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEc
Q 046438 64 SLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGL 143 (851)
Q Consensus 64 ~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 143 (851)
++++|++++|.++ .+|..++ ++|++|+|++|.|+ .+|. .+++|++|+|++|.++ .+|. .+++|++|++
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~---~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC---TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCcEEEecCCCcC-ccChhhC---CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 4556666666665 5555432 55566666666555 2333 3456666666666665 3333 4556666666
Q ss_pred cCccccCCCCccccCCCcCcEEEeeccccccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCcc
Q 046438 144 LSNNLVGVVPATLFNISTLKILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSG 223 (851)
Q Consensus 144 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~ 223 (851)
++|++++..+ .+++|+.|++++|++++ ++. .+++|++|+|++|++++. |.
T Consensus 109 s~N~l~~l~~----~l~~L~~L~L~~N~l~~-lp~----~l~~L~~L~Ls~N~l~~l-~~-------------------- 158 (622)
T 3g06_A 109 FSNPLTHLPA----LPSGLCKLWIFGNQLTS-LPV----LPPGLQELSVSDNQLASL-PA-------------------- 158 (622)
T ss_dssp CSCCCCCCCC----CCTTCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSCC-CC--------------------
T ss_pred cCCcCCCCCC----CCCCcCEEECCCCCCCc-CCC----CCCCCCEEECcCCcCCCc-CC--------------------
Confidence 6666554322 34555666666665552 222 124444444444444321 11
Q ss_pred ccCccccCCCCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccC
Q 046438 224 FIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGS 303 (851)
Q Consensus 224 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~ 303 (851)
.+.+|+.|++++|.++.++ ..+++|+.|++++|++..
T Consensus 159 -------~~~~L~~L~L~~N~l~~l~---------~~~~~L~~L~Ls~N~l~~--------------------------- 195 (622)
T 3g06_A 159 -------LPSELCKLWAYNNQLTSLP---------MLPSGLQELSVSDNQLAS--------------------------- 195 (622)
T ss_dssp -------CCTTCCEEECCSSCCSCCC---------CCCTTCCEEECCSSCCSC---------------------------
T ss_pred -------ccCCCCEEECCCCCCCCCc---------ccCCCCcEEECCCCCCCC---------------------------
Confidence 1233444444444444322 112333334433333321
Q ss_pred CCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCC
Q 046438 304 IPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNL 383 (851)
Q Consensus 304 ~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 383 (851)
+|.. +++|+.|++++|.++. +|.. +++|++|++++|.+++. | ..+++|+.|+|++|+|++ +|. .+
T Consensus 196 l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~l-p---~~l~~L~~L~Ls~N~L~~-lp~---~~ 260 (622)
T 3g06_A 196 LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTSL-P---VLPSELKELMVSGNRLTS-LPM---LP 260 (622)
T ss_dssp CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSC-CCC---CC
T ss_pred CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCcC-C---CCCCcCcEEECCCCCCCc-CCc---cc
Confidence 1111 1344444555554442 2221 25566666666666642 2 334667777777777763 343 45
Q ss_pred ccccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccch
Q 046438 384 ASLRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLK 431 (851)
Q Consensus 384 ~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 431 (851)
++|+.|+|++|+|+.+|..+.++++|+.|+|++|++++..|..+..++
T Consensus 261 ~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 261 SGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp TTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred ccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 678888888888888888888888888888888888876666554443
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=8.9e-27 Score=268.16 Aligned_cols=266 Identities=25% Similarity=0.310 Sum_probs=122.4
Q ss_pred ccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCCcchhhhhccccccccE
Q 046438 187 LELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKV 266 (851)
Q Consensus 187 L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~ 266 (851)
++.|++++|.++ .+|..+. ++|+.|+|++|.++.+.+ .+++|++|+|++|+|+.++. .+++|++
T Consensus 42 l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~lp~---------~l~~L~~ 105 (622)
T 3g06_A 42 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTSLPV---------LPPGLLE 105 (622)
T ss_dssp CCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCSCCCC---------CCTTCCE
T ss_pred CcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCCcCCC---------CCCCCCE
Confidence 444444444444 2233222 445555555555543322 23455555555555544331 2344555
Q ss_pred EeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccc
Q 046438 267 LSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENN 346 (851)
Q Consensus 267 L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 346 (851)
|++++|++.. +|. ...+|+.|++++|++++ +|.. +++|++|++++|.+++. |. .+++|+.|++++|
T Consensus 106 L~Ls~N~l~~--l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N 171 (622)
T 3g06_A 106 LSIFSNPLTH--LPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNN 171 (622)
T ss_dssp EEECSCCCCC--CCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSS
T ss_pred EECcCCcCCC--CCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCC
Confidence 5555554432 222 12244444444444442 2322 24555555555555532 22 1244555555555
Q ss_pred cccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccc
Q 046438 347 QLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLE 426 (851)
Q Consensus 347 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 426 (851)
.+++. | ..+++|+.|++++|++++ +|.. +++|+.|++++|.++.+|.. +++|+.|+|++|.+++ +|
T Consensus 172 ~l~~l-~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l~~~---~~~L~~L~Ls~N~L~~-lp-- 237 (622)
T 3g06_A 172 QLTSL-P---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTS-LP-- 237 (622)
T ss_dssp CCSCC-C---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCSC-CC--
T ss_pred CCCCC-c---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccccCCC---CCCCCEEEccCCccCc-CC--
Confidence 55532 2 234455555555555553 2221 24455555555555555432 2445555555555553 33
Q ss_pred cccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCcccccc
Q 046438 427 IGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKL 502 (851)
Q Consensus 427 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 502 (851)
..+++|+.|++++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+|++|++++.+|..+..+
T Consensus 238 -~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 238 -VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp -CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred -CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 23344555555555554 2333 3344555555555554 444445555555555555555555444444433
No 320
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=5.2e-29 Score=266.02 Aligned_cols=267 Identities=18% Similarity=0.181 Sum_probs=172.8
Q ss_pred ccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCCcchhhhhccccccccE
Q 046438 187 LELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKV 266 (851)
Q Consensus 187 L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~ 266 (851)
++..+++.+.+.......+..+++|+.|+|++|.++++.+..|+++++|++|+|++|.++... .+..+++|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-------~~~~l~~L~~ 84 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETL-------DLESLSTLRT 84 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEE-------EETTCTTCCE
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcch-------hhhhcCCCCE
Confidence 344455666665444444445556666666666666666666666666666666666655321 1333444444
Q ss_pred EeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccc
Q 046438 267 LSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENN 346 (851)
Q Consensus 267 L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 346 (851)
|++++ |.+++.. ..++|++|++++|
T Consensus 85 L~Ls~--------------------------------------------------n~l~~l~-----~~~~L~~L~l~~n 109 (317)
T 3o53_A 85 LDLNN--------------------------------------------------NYVQELL-----VGPSIETLHAANN 109 (317)
T ss_dssp EECCS--------------------------------------------------SEEEEEE-----ECTTCCEEECCSS
T ss_pred EECcC--------------------------------------------------Ccccccc-----CCCCcCEEECCCC
Confidence 44444 4333111 1245555555555
Q ss_pred cccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccCc-hhh-cccCcceEEEecCCCCCCCCc
Q 046438 347 QLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVP-STF-WNLTNILMVDLSSNPLSGSLP 424 (851)
Q Consensus 347 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p-~~~-~~l~~L~~L~Ls~N~l~~~~p 424 (851)
.+++..+.. +++|+.|++++|++++..+..+..+++|++|++++|+++.++ ..+ ..+++|++|+|++|.+++. +
T Consensus 110 ~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~ 185 (317)
T 3o53_A 110 NISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K 185 (317)
T ss_dssp CCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E
T ss_pred ccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c
Confidence 555433322 345666666666666555556666666666666666666543 333 3567777777777777643 3
Q ss_pred cccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCccc-ccCCccccccc
Q 046438 425 LEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILS-GIIPSSLEKLL 503 (851)
Q Consensus 425 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~ 503 (851)
. ...+++|++|+|++|++++ +|..+..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..+..++
T Consensus 186 ~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~ 262 (317)
T 3o53_A 186 G-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQ 262 (317)
T ss_dssp C-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCH
T ss_pred c-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccc
Confidence 2 2347788888888888884 4555888899999999999998 57888999999999999999998 78889999999
Q ss_pred cccceecc-CccccccCCCC
Q 046438 504 YLKYLNVS-FNRLEGEIPRG 522 (851)
Q Consensus 504 ~L~~l~l~-~N~l~~~~p~~ 522 (851)
+|+.++++ .+.++|..|..
T Consensus 263 ~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 263 RVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp HHHHHHHHHHHHHHSSSSCC
T ss_pred cceEEECCCchhccCCchhc
Confidence 99999999 45577666543
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=2.4e-27 Score=248.02 Aligned_cols=212 Identities=23% Similarity=0.254 Sum_probs=127.1
Q ss_pred CCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecc
Q 046438 313 NLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFA 392 (851)
Q Consensus 313 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 392 (851)
+|++|++++|.+++..+..|.++++|++|++++|.+++..+..+..+++|++|++++|++.+..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34444444444443333344444444444444444444444444444455555555555444444445555555555555
Q ss_pred cCcCccCch-hhcccCcceEEEecCCCCCCC-CccccccchhhhhhhccCCcccccCCcccCCCCCcc----EEEccCcc
Q 046438 393 SNELTFVPS-TFWNLTNILMVDLSSNPLSGS-LPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQ----NLSLGDNN 466 (851)
Q Consensus 393 ~N~l~~~p~-~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~L~~N~ 466 (851)
+|+++.++. .+..+++|++|++++|++++. +|..++.+++|++|++++|++++..+..|..+.+|+ .|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 555554433 345555555555555555532 355555555566666666666554445555555554 78899999
Q ss_pred cCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCCcc
Q 046438 467 LQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGTL 525 (851)
Q Consensus 467 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~ 525 (851)
+++..+..+. ..+|+.|+|++|++++..+..+..+++|+.|++++|+|+|.||...++
T Consensus 189 l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l~~l 246 (276)
T 2z62_A 189 MNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 246 (276)
T ss_dssp CCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTTHHH
T ss_pred ccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCchHHH
Confidence 8855555444 458999999999999777777889999999999999999999876554
No 322
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=6.2e-28 Score=276.17 Aligned_cols=184 Identities=21% Similarity=0.146 Sum_probs=129.6
Q ss_pred eccccceEEEEEEE-cCCcEEEEEEEeecc----------hhhHHHHHHHHHHHhhc-CCCcccceeeeeecCCeeEEEE
Q 046438 634 IGSGSFGSVYRGRF-LDGMEVAIKVFHLQL----------EGALESFNAECEVLRSI-RHRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 634 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 701 (851)
.+.|+.|.+..++. --|+.||+|++.... +...+++.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 45666666655432 247889999997542 23446799999999999 6999999999999999999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCC
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDES 781 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 781 (851)
||++|++|.+.+... ..++.. +|+.||++||+|+ |++|||||||||+|||++.+|.+||+|||+|+....+..
T Consensus 322 Eyv~G~~L~d~i~~~-~~l~~~---~I~~QIl~AL~yl---H~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG-EEIDRE---KILGSLLRSLAAL---EKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp ECCCSEEHHHHHHTT-CCCCHH---HHHHHHHHHHHHH---HHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred ecCCCCcHHHHHHhC-CCCCHH---HHHHHHHHHHHHH---HHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 999999999999654 445543 5899999999999 899999999999999999999999999999987654332
Q ss_pred ccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCC
Q 046438 782 MKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRP 826 (851)
Q Consensus 782 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p 826 (851)
...+.+||+.|+|||++.+ .+..++|+||+|++.+++.++..|
T Consensus 395 -~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 395 -WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred -cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 3345689999999999875 467789999999998877655443
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=4.7e-29 Score=291.67 Aligned_cols=399 Identities=16% Similarity=0.144 Sum_probs=172.7
Q ss_pred CCCCcEEeCCCCCCCCCCCcchhcCCccccccccccc-ccccC-CCccccCCCCccEEeccccccccccchhhc----Cc
Q 046438 62 MSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFN-QFAGH-LPREIGNLTSLTSIDLSENHLMGEIPHEIG----NL 135 (851)
Q Consensus 62 ~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N-~i~~~-~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~----~l 135 (851)
+++|++|+|++|.+++..+..+...+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 3445555555544443222222223445555555544 23211 222233445555555555554433222222 33
Q ss_pred ccccEEEccCccccCCCCccc----cCCCcCcEEEeecc-ccccccchhHhhhcccccccccc-------cccccccCCc
Q 046438 136 RNLQALGLLSNNLVGVVPATL----FNISTLKILQLTNN-TLSGSISSSIRLALPNLELFSLA-------NNNFSGKIPS 203 (851)
Q Consensus 136 ~~L~~L~L~~n~l~~~~~~~l----~~l~~L~~L~L~~n-~l~~~~~~~~~~~l~~L~~L~L~-------~N~i~~~~~~ 203 (851)
++|++|++++|. .......+ .++++|+.|++++| .+. . ....+..+++|++|+++ .|.+.+ ++.
T Consensus 184 ~~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~ 259 (594)
T 2p1m_B 184 TSLVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLE-K-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSV 259 (594)
T ss_dssp CCCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHH-H-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHH
T ss_pred CcCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHH-H-HHHHHhcCCcceEcccccccCccchhhHHH-HHH
Confidence 455555555444 11111111 22355555555554 222 1 22223345555555522 223332 222
Q ss_pred cccccCCCcEE-ecCCCCCccccCccccCCCCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCc
Q 046438 204 FIFNASKLSIC-ELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSS 282 (851)
Q Consensus 204 ~~~~~~~L~~L-~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~ 282 (851)
.+.++++|+.| .+.+... ...+..+..+++|++|+|++|.++.. .+...+..+++|++|++++| +.+..++.
T Consensus 260 ~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~----~l~~~~~~~~~L~~L~l~~~-~~~~~l~~- 332 (594)
T 2p1m_B 260 ALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSY----DLVKLLCQCPKLQRLWVLDY-IEDAGLEV- 332 (594)
T ss_dssp HHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHH----HHHHHHTTCTTCCEEEEEGG-GHHHHHHH-
T ss_pred HHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHH----HHHHHHhcCCCcCEEeCcCc-cCHHHHHH-
Confidence 44555555555 2332221 12223333455666666666654321 11222445566666666655 32211111
Q ss_pred cccccccccEEEeec---------CccccCCCcccc-cccCCcEEEecCCCCCCCcCcccc-CCCCCcEEEcc--c----
Q 046438 283 IGNLSLSMERFYLHN---------CNIRGSIPKEMG-NLINLIIIRLGYNKLNGSIPSTLS-RLEKLQILGLE--N---- 345 (851)
Q Consensus 283 ~~~~~~~L~~L~L~~---------n~i~~~~p~~l~-~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~--~---- 345 (851)
+.....+|++|++.+ +.+++.....+. .+++|+.|+++.|.+++..+..+. .+++|+.|+++ +
T Consensus 333 l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~ 412 (594)
T 2p1m_B 333 LASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAP 412 (594)
T ss_dssp HHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCC
T ss_pred HHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCc
Confidence 111123566666633 233322222222 255566665555555543333332 35555555555 2
Q ss_pred ccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCc-cCchhhcc-cCcceEEEecCCCCCCCC
Q 046438 346 NQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELT-FVPSTFWN-LTNILMVDLSSNPLSGSL 423 (851)
Q Consensus 346 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~p~~~~~-l~~L~~L~Ls~N~l~~~~ 423 (851)
+.+++...+. .++..+..+++|++|++++ .++ ..+..+.. +++|+.|+|++|.+++..
T Consensus 413 ~~l~~~~~~~-------------------~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~ 472 (594)
T 2p1m_B 413 DYLTLEPLDI-------------------GFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLG 472 (594)
T ss_dssp CTTTCCCTHH-------------------HHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHH
T ss_pred ccccCCchhh-------------------HHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHH
Confidence 2333111000 0111133444555555544 333 11222332 555666666666655443
Q ss_pred cccc-ccchhhhhhhccCCcccccCCc-ccCCCCCccEEEccCcccCCCCcccc-cCCCCCCEEECCCCcc
Q 046438 424 PLEI-GNLKVLVELYLSRNNLSGDIPT-TIGGLKNLQNLSLGDNNLQGSIPNSI-GDLISLECLDLSNNIL 491 (851)
Q Consensus 424 p~~~-~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l 491 (851)
+..+ .++++|++|+|++|.+++..+. .+..+++|+.|++++|+++......+ ..+++|+...+..+.-
T Consensus 473 ~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 473 MHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred HHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 3333 4456666666666666433322 33446677777777777643333333 3456666666655543
No 324
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.94 E-value=3.8e-26 Score=239.81 Aligned_cols=207 Identities=25% Similarity=0.281 Sum_probs=185.1
Q ss_pred cccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCcccc
Q 046438 308 MGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLR 387 (851)
Q Consensus 308 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 387 (851)
+.++++++++++++|.++ .+|..+. +.++.|++++|.+++..+..+..+++|+.|+|++|.+++..+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 567788999999999988 4454443 6889999999999988888899999999999999999854332 7889999
Q ss_pred ceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCccc
Q 046438 388 KLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNL 467 (851)
Q Consensus 388 ~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 467 (851)
+|++++|+++.+|..+..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 81 ~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 81 TLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 99999999999999999999999999999999987788999999999999999999977777889999999999999999
Q ss_pred CCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCC
Q 046438 468 QGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIP 520 (851)
Q Consensus 468 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p 520 (851)
++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.++|++|+|.|.|.
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred CccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCc
Confidence 9766677889999999999999999 788888899999999999999999884
No 325
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=2.7e-27 Score=267.49 Aligned_cols=148 Identities=19% Similarity=0.147 Sum_probs=103.8
Q ss_pred CCCCEEEccCcccCCCCCccccCCccccceecccCcCcc-Cchhhc-ccCcceEEEecCCCCCCCCccccccchhhhhhh
Q 046438 360 ARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTF-VPSTFW-NLTNILMVDLSSNPLSGSLPLEIGNLKVLVELY 437 (851)
Q Consensus 360 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 437 (851)
++|+.|+|++|.+++..|..|+.+++|+.|+|++|.++. .|..+. .+++|+.|+|++|.+++. | .+..+++|+.|+
T Consensus 120 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~ 197 (487)
T 3oja_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLD 197 (487)
T ss_dssp SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEE
T ss_pred CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEE
Confidence 344555555555554445555555555555555555553 233443 466666666666666644 2 233477788888
Q ss_pred ccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCccc-ccCCccccccccccceecc
Q 046438 438 LSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILS-GIIPSSLEKLLYLKYLNVS 511 (851)
Q Consensus 438 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~l~l~ 511 (851)
|++|+|++ +|..|..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 198 Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 198 LSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCCCC-CCHhHcCCCCccEEEecCCcCc-ccchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 88888875 4445888889999999999998 47778889999999999999998 6788889999999999887
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.8e-25 Score=232.71 Aligned_cols=207 Identities=27% Similarity=0.323 Sum_probs=168.3
Q ss_pred CCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecc
Q 046438 313 NLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFA 392 (851)
Q Consensus 313 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 392 (851)
+.+.++++++.++ .+|..+. +++++|++++|.+++..+..|..+++|++|++++|++++..+..|..+++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 3556666666666 3444333 467777777777776666677777777777777777776666667778888888888
Q ss_pred cCcCccCch-hhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCC
Q 046438 393 SNELTFVPS-TFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSI 471 (851)
Q Consensus 393 ~N~l~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 471 (851)
+|+++.+|. .+..+++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|..+++|+.|+|++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 888887765 4577888888888888888777778888999999999999998666667899999999999999999777
Q ss_pred cccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCC
Q 046438 472 PNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRG 522 (851)
Q Consensus 472 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~ 522 (851)
+..|..+++|++|+|++|++++..+..+..+++|+.|++++|+|.|.|+..
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 224 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNGI 224 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSSS
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCccH
Confidence 778999999999999999999877778999999999999999999998743
No 327
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=3.2e-25 Score=231.93 Aligned_cols=207 Identities=23% Similarity=0.221 Sum_probs=187.2
Q ss_pred ccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEc
Q 046438 288 LSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYL 367 (851)
Q Consensus 288 ~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 367 (851)
.+++.|++++|++++..+..+.++++|++|++++|.+.+..+..|..+++|++|++++|.+++..+..+..+++|+.|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 47888888889888777778999999999999999999888889999999999999999999888899999999999999
Q ss_pred cCcccCCCCCccccCCccccceecccCcCcc--CchhhcccCcceEEEecCCCCCCCCccccccchhhh----hhhccCC
Q 046438 368 DHNKLSGSIPACFGNLASLRKLSFASNELTF--VPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLV----ELYLSRN 441 (851)
Q Consensus 368 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~L~~N 441 (851)
++|++.+..+..+..+++|++|++++|+++. +|..+..+++|+.|+|++|++++..+..+..+++|+ +|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 9999998888789999999999999999996 688999999999999999999988888888888888 8999999
Q ss_pred cccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccC
Q 046438 442 NLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGII 495 (851)
Q Consensus 442 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 495 (851)
++++..+..+. ..+|+.|+|++|++++..+..|..+++|+.|+|++|++++..
T Consensus 188 ~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 188 PMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp CCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred cccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 99965555554 458999999999999777777899999999999999999643
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.1e-24 Score=228.64 Aligned_cols=208 Identities=26% Similarity=0.201 Sum_probs=186.5
Q ss_pred cccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccCchhhcccCcce
Q 046438 331 TLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPSTFWNLTNIL 410 (851)
Q Consensus 331 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~ 410 (851)
.+.++++++++++++|.++.. |..+. +.++.|+|++|++.+..+..|..+++|++|+|++|+++.++.. ..+++|+
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~ 80 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLG 80 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSC-CSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCC
T ss_pred cccccCCccEEECCCCCCCcC-CCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCC
Confidence 367889999999999999954 44443 6899999999999988889999999999999999999988765 7899999
Q ss_pred EEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCc
Q 046438 411 MVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNI 490 (851)
Q Consensus 411 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 490 (851)
+|+|++|+++ .+|..+..+++|++|++++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 9999999998 788899999999999999999997777899999999999999999998778888999999999999999
Q ss_pred ccccCCccccccccccceeccCccccccCCCCCcccccCcccccCCcCccCCC
Q 046438 491 LSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGTLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 491 l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~~ 543 (851)
|++..+..+..+++|+.|+|++|+++..++.......+..+.+.+||+.|++.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCc
Confidence 99777777899999999999999999655555556778888999999999754
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=4.5e-24 Score=222.18 Aligned_cols=203 Identities=26% Similarity=0.334 Sum_probs=109.5
Q ss_pred CCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhcCCcccccccc
Q 046438 18 SLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSL 95 (851)
Q Consensus 18 ~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L 95 (851)
+.+.+++++++++ .+|..+. ++|++|+|++|++++..+ +..+++|++|++++|+++ .++..+|..+++|++|+|
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCCTTTTSSCTTCCEEEC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeChhhhcCCCCCCEEEC
Confidence 3555666666665 3444332 445555555555554332 444555555555555554 444444444455555555
Q ss_pred cccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeeccccccc
Q 046438 96 AFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNTLSGS 175 (851)
Q Consensus 96 ~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 175 (851)
++|.+++..+..|.++++|++|+|++|.++ +..+..|..+++|++|+|++|.++ .
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~------------------------~~~~~~~~~l~~L~~L~Ls~n~l~-~ 147 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLK------------------------SLPPRVFDSLTKLTYLSLGYNELQ-S 147 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCC------------------------CCCTTTTTTCTTCCEEECCSSCCC-C
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccC------------------------eeCHHHhCcCcCCCEEECCCCcCC-c
Confidence 555444444444444444444444444444 444444444444444444444444 2
Q ss_pred cchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCC
Q 046438 176 ISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSN 249 (851)
Q Consensus 176 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 249 (851)
++...+..+++|++|+|++|++++..+..+.++++|+.|+|++|.++++.+..|..+++|+.|+|++|++....
T Consensus 148 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 148 LPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred cCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 33333334445555555555555444555566667777777777777666677777788888888888776543
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=4e-24 Score=222.73 Aligned_cols=205 Identities=24% Similarity=0.292 Sum_probs=176.0
Q ss_pred ccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccc
Q 046438 307 EMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASL 386 (851)
Q Consensus 307 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 386 (851)
.+..+++|+.|++++|.+... ..+..+++|++|++++|.+++. ..+..+++|++|++++|++++..+..|..+++|
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp CHHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ccccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 356778888888888888632 3477888899999999988863 477888899999999999988888888889999
Q ss_pred cceecccCcCccCchh-hcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCc
Q 046438 387 RKLSFASNELTFVPST-FWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDN 465 (851)
Q Consensus 387 ~~L~L~~N~l~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 465 (851)
++|++++|+++.++.. +..+++|++|++++|++++..+..|+.+++|++|++++|++++..+..|+.+++|+.|++++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 9999999999877654 688999999999999999777777889999999999999999777777899999999999999
Q ss_pred ccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCC
Q 046438 466 NLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRG 522 (851)
Q Consensus 466 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~ 522 (851)
++++..|..+..+++|+.|+|++|.+.+. +++|+.++++.|.++|.+|..
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred cCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 99988888899999999999999998854 557899999999999999864
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.9e-24 Score=225.15 Aligned_cols=209 Identities=22% Similarity=0.272 Sum_probs=126.2
Q ss_pred CCCCCCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCcccccccCCCCCCCcEEeCCCCCCCCCCCcchhcCCccccc
Q 046438 13 LGSLSSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFPFFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQF 92 (851)
Q Consensus 13 l~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 92 (851)
+..+++|++|++++|.++. + ..+..+++|++|+|++|++++...+..+++|++|++++|.++ .++...|..+++|++
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~ 113 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKE 113 (272)
T ss_dssp HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCCGGGTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCE
T ss_pred cccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCchhhcCCCCCCEEECCCCccC-ccChhHhcCCcCCCE
Confidence 4455666666666666652 2 236666666666666666666555666666666666666666 455555666666666
Q ss_pred ccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeecccc
Q 046438 93 LSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNTL 172 (851)
Q Consensus 93 L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 172 (851)
|+|++|++++..+..|+++++|++|+|++|.+++..+..|+.+++|++|++++|++++..+..+..+++|++|++++|++
T Consensus 114 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 193 (272)
T 3rfs_A 114 LVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL 193 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcC
Confidence 66666666655555566666666666666666655555566666666666666666665555566666666666666666
Q ss_pred ccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCC
Q 046438 173 SGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNM 232 (851)
Q Consensus 173 ~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l 232 (851)
++ ++...+..+++|++|++++|.+.+. +++|+.+++..|.+++.+|..++.+
T Consensus 194 ~~-~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 194 KS-VPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp SC-CCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred Cc-cCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 63 3333444566666666666655432 2345555555555555555555443
No 332
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=3.7e-25 Score=251.87 Aligned_cols=185 Identities=21% Similarity=0.200 Sum_probs=146.5
Q ss_pred CccceeccccceEEEEEEEcCCcEEEEEEEeecc--------hhhHHHHHHHHHHHhhcCCCcccceeeeeecCCeeEEE
Q 046438 629 NVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQL--------EGALESFNAECEVLRSIRHRNLVRIISSCTNDDFKALV 700 (851)
Q Consensus 629 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 700 (851)
...+.||+|+||+||+|+. .++.+|+|+..... ....+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3457899999999999954 67889999864432 11235689999999999999999666666667778999
Q ss_pred EeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCC
Q 046438 701 LDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDE 780 (851)
Q Consensus 701 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~ 780 (851)
|||+++++|.+++.. +..++.|+++|++|| |++||+||||||+||+++. .+||+|||+|+......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~L---H~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKL---HKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHH---HHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHH---HHCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999998854 457999999999999 8889999999999999998 99999999999875432
Q ss_pred Ccc------ccccccCccccCcccccc--CCCCcchhhHHHHHHHHHHHhCCCCCC
Q 046438 781 SMK------HTQTLATIGYMAPEYGRE--GQISTEGDVYSFGIMLMEIFTRKRPTD 828 (851)
Q Consensus 781 ~~~------~~~~~~t~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~pf~ 828 (851)
... .....||+.|+|||++.. ..|+..+|+|+...-..+.+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 211 235689999999999987 668888999999999999998888774
No 333
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=4.8e-24 Score=226.82 Aligned_cols=201 Identities=18% Similarity=0.222 Sum_probs=103.8
Q ss_pred ccEEEeecCccccCCCccc--ccccCCcEEEecCCCCCCCcC----ccccCCCCCcEEEcccccccccccccccccCCCC
Q 046438 290 MERFYLHNCNIRGSIPKEM--GNLINLIIIRLGYNKLNGSIP----STLSRLEKLQILGLENNQLEGRILDDICRLARLS 363 (851)
Q Consensus 290 L~~L~L~~n~i~~~~p~~l--~~l~~L~~L~L~~n~l~~~~~----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 363 (851)
|++|++++|++.+..|..+ ..+++|++|++++|.+.+..+ ..+..+++|++|++++|.+.+..+..+..+++|+
T Consensus 93 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 172 (310)
T 4glp_A 93 LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALT 172 (310)
T ss_dssp CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCC
T ss_pred eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCC
Confidence 4445555555554555554 555555555555555554333 2233455555555555555554445555555555
Q ss_pred EEEccCcccCCC--C--CccccCCccccceecccCcCccCchhhcccCcceEEEecCCCCCCCCcc-ccccchhhhhhhc
Q 046438 364 SVYLDHNKLSGS--I--PACFGNLASLRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPL-EIGNLKVLVELYL 438 (851)
Q Consensus 364 ~L~L~~N~l~~~--~--~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L 438 (851)
+|+|++|++.+. . +..+..+++|++|+|++|+++.++.. +. .++.+++|++|+|
T Consensus 173 ~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~---------------------~~~l~~~l~~L~~L~L 231 (310)
T 4glp_A 173 SLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGV---------------------CAALAAAGVQPHSLDL 231 (310)
T ss_dssp EEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHH---------------------HHHHHHHTCCCSSEEC
T ss_pred EEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHH---------------------HHHHHhcCCCCCEEEC
Confidence 555555554321 1 12223445555555555555444331 00 1234445555555
Q ss_pred cCCcccccCCcccCCC---CCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccc
Q 046438 439 SRNNLSGDIPTTIGGL---KNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRL 515 (851)
Q Consensus 439 ~~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l 515 (851)
++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|++++|+|
T Consensus 232 s~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l 306 (310)
T 4glp_A 232 SHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPF 306 (310)
T ss_dssp TTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTT
T ss_pred CCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCC
Confidence 5555554444444444 46666666666666 4555543 5666667766666643 32 45666677777777766
Q ss_pred c
Q 046438 516 E 516 (851)
Q Consensus 516 ~ 516 (851)
+
T Consensus 307 ~ 307 (310)
T 4glp_A 307 L 307 (310)
T ss_dssp S
T ss_pred C
Confidence 5
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=2.6e-24 Score=228.93 Aligned_cols=204 Identities=23% Similarity=0.211 Sum_probs=139.9
Q ss_pred ccCCcEEEecCCCCCCCcCccc--cCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccc
Q 046438 311 LINLIIIRLGYNKLNGSIPSTL--SRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRK 388 (851)
Q Consensus 311 l~~L~~L~L~~n~l~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 388 (851)
+++|++|++++|.+.+..|..+ ..+++|++|++++|.+++..+.. ....+..+++|++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~--------------------~~~~~~~~~~L~~ 149 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWL--------------------AELQQWLKPGLKV 149 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSH--------------------HHHHTTBCSCCCE
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhh--------------------HHHHhhhccCCCE
Confidence 4456666666666666666555 55666666666666665432200 0022234455555
Q ss_pred eecccCcCccCc-hhhcccCcceEEEecCCCCCCC--C--ccccccchhhhhhhccCCcccccCCc----ccCCCCCccE
Q 046438 389 LSFASNELTFVP-STFWNLTNILMVDLSSNPLSGS--L--PLEIGNLKVLVELYLSRNNLSGDIPT----TIGGLKNLQN 459 (851)
Q Consensus 389 L~L~~N~l~~~p-~~~~~l~~L~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~ 459 (851)
|+|++|+++.++ ..+..+++|++|+|++|++.+. + +..++.+++|++|+|++|+++. ++. .++.+++|++
T Consensus 150 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~ 228 (310)
T 4glp_A 150 LSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHS 228 (310)
T ss_dssp EEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSS
T ss_pred EEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCE
Confidence 555555555443 3455566666666666665431 1 2234667888888888888873 333 3578899999
Q ss_pred EEccCcccCCCCcccccCC---CCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCCcccccCcccccCC
Q 046438 460 LSLGDNNLQGSIPNSIGDL---ISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGTLANFTSESFMGN 536 (851)
Q Consensus 460 L~L~~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~l~~~~~~~n 536 (851)
|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+|++|++++. |....++.+..+.+.+|
T Consensus 229 L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~L~~N 304 (310)
T 4glp_A 229 LDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQPDELPEVDNLTLDGN 304 (310)
T ss_dssp EECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CCTTSCCCCSCEECSST
T ss_pred EECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-chhhhCCCccEEECcCC
Confidence 9999999998878888777 69999999999999 6787774 8999999999999975 44567889999999999
Q ss_pred cCc
Q 046438 537 DLL 539 (851)
Q Consensus 537 ~~~ 539 (851)
+..
T Consensus 305 ~l~ 307 (310)
T 4glp_A 305 PFL 307 (310)
T ss_dssp TTS
T ss_pred CCC
Confidence 764
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=4.2e-25 Score=240.43 Aligned_cols=99 Identities=20% Similarity=0.219 Sum_probs=56.9
Q ss_pred CCcEEEccccccccc----ccccccc-cCCCCEEEccCcccCCCCC----ccccCCccccceecccCcCc--------cC
Q 046438 337 KLQILGLENNQLEGR----ILDDICR-LARLSSVYLDHNKLSGSIP----ACFGNLASLRKLSFASNELT--------FV 399 (851)
Q Consensus 337 ~L~~L~L~~n~l~~~----~~~~~~~-l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~--------~~ 399 (851)
+|++|+|++|.+++. ++..+.. .++|+.|+|++|++++..+ ..+..+++|+.|++++|++. .+
T Consensus 197 ~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l 276 (362)
T 3goz_A 197 SVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKAL 276 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHH
T ss_pred CCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHH
Confidence 555555555555542 2223333 2356666666666654433 23455667777777777743 33
Q ss_pred chhhcccCcceEEEecCCCCCCCCccccccchhhhhhh
Q 046438 400 PSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELY 437 (851)
Q Consensus 400 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 437 (851)
+..+..+++|+.||+++|++.+..+..+. ..++.+.
T Consensus 277 ~~~~~~l~~L~~LdL~~N~l~~~~~~~~~--~~l~~~~ 312 (362)
T 3goz_A 277 GAAFPNIQKIILVDKNGKEIHPSHSIPIS--NLIRELS 312 (362)
T ss_dssp HTTSTTCCEEEEECTTSCBCCGGGCHHHH--HHHHHHH
T ss_pred HHHhccCCceEEEecCCCcCCCcchHHHH--HHHHHCC
Confidence 44567788888999999988765444332 3344443
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=7.7e-24 Score=216.17 Aligned_cols=196 Identities=17% Similarity=0.193 Sum_probs=130.7
Q ss_pred CCcEEEecCCCCCCCcCccccCCCCCcEEEccccc-ccccccccccccCCCCEEEccC-cccCCCCCccccCCcccccee
Q 046438 313 NLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQ-LEGRILDDICRLARLSSVYLDH-NKLSGSIPACFGNLASLRKLS 390 (851)
Q Consensus 313 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ 390 (851)
+|++|++++|++++..+..|..+++|++|++++|. +++..+..|..+++|++|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 55556666666555545556666666666666664 5555555566666666666666 666655556666666777777
Q ss_pred cccCcCccCchhhcccCcce---EEEecCC-CCCCCCccccccchhhh-hhhccCCcccccCCcccCCCCCccEEEccCc
Q 046438 391 FASNELTFVPSTFWNLTNIL---MVDLSSN-PLSGSLPLEIGNLKVLV-ELYLSRNNLSGDIPTTIGGLKNLQNLSLGDN 465 (851)
Q Consensus 391 L~~N~l~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 465 (851)
+++|+++.+|. +..+++|+ +|++++| .+++..+..|.++++|+ +|++++|+++...+..|.. ++|+.|+|++|
T Consensus 112 l~~n~l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n 189 (239)
T 2xwt_C 112 IFNTGLKMFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKN 189 (239)
T ss_dssp EEEECCCSCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTC
T ss_pred CCCCCCccccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCC
Confidence 77777766665 56666666 7777777 77765566677777787 8888888877333333444 77888888888
Q ss_pred c-cCCCCcccccCC-CCCCEEECCCCcccccCCccccccccccceeccCc
Q 046438 466 N-LQGSIPNSIGDL-ISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFN 513 (851)
Q Consensus 466 ~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N 513 (851)
+ +++..+..|.++ ++|+.|+|++|++++ +|.. .+++|+.|+++++
T Consensus 190 ~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 190 KYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp TTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 4 876666777888 888888888888874 4433 5667777777765
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=1.8e-25 Score=246.00 Aligned_cols=187 Identities=24% Similarity=0.276 Sum_probs=98.9
Q ss_pred cccccCCcEEEecCCCCCC----CcCccccCCCCCcEEEcccccccccccccccc----c---------CCCCEEEccCc
Q 046438 308 MGNLINLIIIRLGYNKLNG----SIPSTLSRLEKLQILGLENNQLEGRILDDICR----L---------ARLSSVYLDHN 370 (851)
Q Consensus 308 l~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~----l---------~~L~~L~L~~N 370 (851)
+..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+.. + ++|++|+|++|
T Consensus 90 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n 169 (386)
T 2ca6_A 90 LLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRN 169 (386)
T ss_dssp HTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSS
T ss_pred HhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCC
Confidence 4566777777777777765 35556677777777777777776444433333 2 56666666666
Q ss_pred ccC-CCCC---ccccCCccccceecccCcCc------cCchhhcccCcceEEEecCCCCC----CCCccccccchhhhhh
Q 046438 371 KLS-GSIP---ACFGNLASLRKLSFASNELT------FVPSTFWNLTNILMVDLSSNPLS----GSLPLEIGNLKVLVEL 436 (851)
Q Consensus 371 ~l~-~~~~---~~~~~l~~L~~L~L~~N~l~------~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L 436 (851)
+++ +..+ ..+..+++|++|++++|+++ .+|..+..+++|+.|+|++|.++ +.+|..+..+++|++|
T Consensus 170 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L 249 (386)
T 2ca6_A 170 RLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 249 (386)
T ss_dssp CCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEE
T ss_pred CCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEE
Confidence 665 2222 23445555555555555555 12224455555555555555553 2344444444445555
Q ss_pred hccCCccccc----CCccc--CCCCCccEEEccCcccCC----CCcccc-cCCCCCCEEECCCCccccc
Q 046438 437 YLSRNNLSGD----IPTTI--GGLKNLQNLSLGDNNLQG----SIPNSI-GDLISLECLDLSNNILSGI 494 (851)
Q Consensus 437 ~L~~N~l~~~----~~~~~--~~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~Ls~N~l~~~ 494 (851)
+|++|++++. +|..+ +.+++|+.|+|++|++++ .+|..+ .++++|++|+|++|++++.
T Consensus 250 ~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 250 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp ECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred ECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 5555544432 23333 224555555555555543 244444 3345555555555555543
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=1.5e-23 Score=214.11 Aligned_cols=194 Identities=18% Similarity=0.205 Sum_probs=108.8
Q ss_pred CCCEEEcCCCccccccc--CCCCCCCcEEeCCCCC-CCCCCCcchhcCCcccccccccc-cccccCCCccccCCCCccEE
Q 046438 42 TLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNR-LSGELPANIFSYLPFVQFLSLAF-NQFAGHLPREIGNLTSLTSI 117 (851)
Q Consensus 42 ~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~-l~~~~~~~~~~~l~~L~~L~L~~-N~i~~~~~~~l~~l~~L~~L 117 (851)
+|++|+|++|++++..+ +..+++|++|++++|+ ++ .+++..|..+++|++|+|++ |.+++..+..|.++++|++|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 56666666666665443 4556666666666664 54 55555566666666666665 66665555566666666666
Q ss_pred eccccccccccchhhcCccccc---EEEccCc-cccCCCCccccCCCcCc-EEEeeccccccccchhHhhhccccccccc
Q 046438 118 DLSENHLMGEIPHEIGNLRNLQ---ALGLLSN-NLVGVVPATLFNISTLK-ILQLTNNTLSGSISSSIRLALPNLELFSL 192 (851)
Q Consensus 118 ~Ls~n~l~~~~~~~~~~l~~L~---~L~L~~n-~l~~~~~~~l~~l~~L~-~L~L~~n~l~~~~~~~~~~~l~~L~~L~L 192 (851)
++++|.+++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ .|++++|+++ .++...+.. +
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~-~------- 179 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG-T------- 179 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT-C-------
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC-C-------
Confidence 666666653 443 55555555 6666666 55555555555555565 6666555555 444433322 4
Q ss_pred ccccccccCCccccccCCCcEEecCCCC-CccccCccccCC-CCcceEeccCccccCCCCcchhhhhccccccccEEecc
Q 046438 193 ANNNFSGKIPSFIFNASKLSICELPDNS-FSGFIPNRFHNM-RNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLT 270 (851)
Q Consensus 193 ~~N~i~~~~~~~~~~~~~L~~L~L~~n~-l~~~~~~~~~~l-~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls 270 (851)
+|+.|++++|+ ++.+.+..|.++ ++|++|++++|+++.++.. .+++|+.|+++
T Consensus 180 -----------------~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--------~~~~L~~L~l~ 234 (239)
T 2xwt_C 180 -----------------KLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK--------GLEHLKELIAR 234 (239)
T ss_dssp -----------------EEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT--------TCTTCSEEECT
T ss_pred -----------------CCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh--------HhccCceeecc
Confidence 44455555552 554545555555 5555666655555544321 34455555555
Q ss_pred CC
Q 046438 271 GN 272 (851)
Q Consensus 271 ~N 272 (851)
++
T Consensus 235 ~~ 236 (239)
T 2xwt_C 235 NT 236 (239)
T ss_dssp TC
T ss_pred Cc
Confidence 54
No 339
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1e-24 Score=237.40 Aligned_cols=231 Identities=18% Similarity=0.202 Sum_probs=149.5
Q ss_pred ccEEEeecCccccCCC----ccccccc-CCcEEEecCCCCCCCcCccccCC-----CCCcEEEccccccccccccccccc
Q 046438 290 MERFYLHNCNIRGSIP----KEMGNLI-NLIIIRLGYNKLNGSIPSTLSRL-----EKLQILGLENNQLEGRILDDICRL 359 (851)
Q Consensus 290 L~~L~L~~n~i~~~~p----~~l~~l~-~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l 359 (851)
|++|++++|++++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|++|+|++|.+++..+..++..
T Consensus 24 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 103 (362)
T 3goz_A 24 VTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKT 103 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH
T ss_pred ceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHH
Confidence 4444444444443333 4555566 67777777777766555555553 677777777777776555544433
Q ss_pred -----CCCCEEEccCcccCCCCCcccc----C-CccccceecccCcCc-----cCchhhcccC-cceEEEecCCCCCCCC
Q 046438 360 -----ARLSSVYLDHNKLSGSIPACFG----N-LASLRKLSFASNELT-----FVPSTFWNLT-NILMVDLSSNPLSGSL 423 (851)
Q Consensus 360 -----~~L~~L~L~~N~l~~~~~~~~~----~-l~~L~~L~L~~N~l~-----~~p~~~~~l~-~L~~L~Ls~N~l~~~~ 423 (851)
++|+.|+|++|++++..+..+. . .++|++|+|++|+++ .++..+..++ +|++|+|++|++++..
T Consensus 104 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~ 183 (362)
T 3goz_A 104 LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKN 183 (362)
T ss_dssp HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSC
T ss_pred HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhh
Confidence 6777777777777655554433 2 247777777777777 3344455555 7888888888887666
Q ss_pred ccccccc-----hhhhhhhccCCccccc----CCcccCC-CCCccEEEccCcccCCCCc----ccccCCCCCCEEECCCC
Q 046438 424 PLEIGNL-----KVLVELYLSRNNLSGD----IPTTIGG-LKNLQNLSLGDNNLQGSIP----NSIGDLISLECLDLSNN 489 (851)
Q Consensus 424 p~~~~~l-----~~L~~L~L~~N~l~~~----~~~~~~~-l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N 489 (851)
+..+... ++|++|+|++|+|++. ++..+.. .++|++|+|++|++++..+ ..+..+++|++|+|++|
T Consensus 184 ~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n 263 (362)
T 3goz_A 184 CAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYD 263 (362)
T ss_dssp HHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHH
T ss_pred HHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccC
Confidence 6544433 5788888888888752 4445554 3578888888888876544 33466788888888888
Q ss_pred ccccc-------CCccccccccccceeccCccccccCC
Q 046438 490 ILSGI-------IPSSLEKLLYLKYLNVSFNRLEGEIP 520 (851)
Q Consensus 490 ~l~~~-------~p~~l~~l~~L~~l~l~~N~l~~~~p 520 (851)
.+.+. ++..+..+++|+.|++++|++.+..+
T Consensus 264 ~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 264 IVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred CccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 85543 33456677888888888888876633
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=4e-23 Score=219.02 Aligned_cols=196 Identities=21% Similarity=0.302 Sum_probs=156.7
Q ss_pred cccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCcccc
Q 046438 308 MGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLR 387 (851)
Q Consensus 308 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 387 (851)
+..+++|+.|++++|.+.. ++ .+..+++|++|++++|.+++..+ +..+++|+.|++++|++.+. ..+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCC
Confidence 4567788888888888774 33 57778888888888888876544 77888888888888888753 3578888888
Q ss_pred ceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCccc
Q 046438 388 KLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNL 467 (851)
Q Consensus 388 ~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 467 (851)
+|++++|+++.++. +..+++|+.|++++|++++..+ ++.+++|++|++++|++++ ++. +..+++|+.|++++|++
T Consensus 111 ~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 111 TLDLTSTQITDVTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EEECTTSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCC
T ss_pred EEECCCCCCCCchh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCcc
Confidence 88888888888765 7888888888998888885443 7888889999999998885 343 88889999999999999
Q ss_pred CCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCcccccc
Q 046438 468 QGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGE 518 (851)
Q Consensus 468 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~ 518 (851)
++. +. +..+++|++|+|++|++++..| +..+++|+.|++++|++++.
T Consensus 186 ~~~-~~-l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 186 SDI-SP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CCC-GG-GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECC
T ss_pred CcC-hh-hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecC
Confidence 854 33 8888999999999999986543 78899999999999999764
No 341
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=7.8e-23 Score=210.25 Aligned_cols=182 Identities=24% Similarity=0.260 Sum_probs=115.3
Q ss_pred CCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecc
Q 046438 313 NLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFA 392 (851)
Q Consensus 313 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 392 (851)
+.++++++++.++ .+|..+. +.++.|+|++|.+++..+..+..+++|++|+|++|++.+..+..|
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~------------ 79 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVF------------ 79 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTT------------
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHh------------
Confidence 4556666666666 3343333 355555555555555444445555555555555555544444444
Q ss_pred cCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCc
Q 046438 393 SNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIP 472 (851)
Q Consensus 393 ~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 472 (851)
..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+
T Consensus 80 -----------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 148 (251)
T 3m19_A 80 -----------DDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPA 148 (251)
T ss_dssp -----------TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred -----------ccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCH
Confidence 445555555555555554445555666666666666666665555556777777888888887776666
Q ss_pred ccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCC
Q 046438 473 NSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIP 520 (851)
Q Consensus 473 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p 520 (851)
..|+.+++|++|+|++|++++..+..+..+++|+.|++++|+|+|.+.
T Consensus 149 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 149 GAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred HHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 677777888888888888887666677778888888888888877743
No 342
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=7.8e-23 Score=216.84 Aligned_cols=195 Identities=23% Similarity=0.332 Sum_probs=100.5
Q ss_pred CCCCCCEEEcCCCcccccccCCCCCCCcEEeCCCCCCCCCCCcchhcCCcccccccccccccccCCCccccCCCCccEEe
Q 046438 39 SINTLEILDLSNNQLSGSFPFFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSID 118 (851)
Q Consensus 39 ~l~~L~~L~Ls~n~l~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~ 118 (851)
.+++|++|++++|+++....+..+++|++|++++|.++ .++. +..+++|++|+|++|++++. ..+..+++|++|+
T Consensus 39 ~l~~L~~L~l~~~~i~~l~~~~~l~~L~~L~L~~n~i~-~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~ 113 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQIT-DLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLD 113 (308)
T ss_dssp HHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCC-CCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEE
T ss_pred HcCCcCEEEeeCCCccCchhhhccCCCCEEEccCCcCC-CChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEE
Confidence 34444455555544444333444444555555555444 2332 44445555555555554432 2345555555555
Q ss_pred ccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeeccccccccchhHhhhccccccccccccccc
Q 046438 119 LSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNTLSGSISSSIRLALPNLELFSLANNNFS 198 (851)
Q Consensus 119 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~ 198 (851)
|++|.+++ ++. +..+++|++|++++|++++..+ +..+++|+.|++++|++++ ++. +..+++|++|++++|+++
T Consensus 114 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 114 LTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp CTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC-Chh--hcCCCCCCEEECCCCccC
Confidence 55555543 222 5555555555555555554322 4455555555555555542 222 334555555555555555
Q ss_pred ccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCC
Q 046438 199 GKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSN 249 (851)
Q Consensus 199 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 249 (851)
+..+ +..+++|+.|+|++|.+++..+ +..+++|++|++++|+++..+
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECCC
T ss_pred cChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecCC
Confidence 4332 4556666666666666665542 666777777777777776543
No 343
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=5.4e-25 Score=242.14 Aligned_cols=244 Identities=22% Similarity=0.276 Sum_probs=191.6
Q ss_pred hhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCC---CCCcCcc
Q 046438 255 ISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKL---NGSIPST 331 (851)
Q Consensus 255 ~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l---~~~~~~~ 331 (851)
...+..+++|++|+|++|++.+... ..++..+..+++|++|+|++|.+ .+.+|..
T Consensus 25 ~~~l~~~~~L~~L~L~~n~i~~~~~----------------------~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~ 82 (386)
T 2ca6_A 25 FAVLLEDDSVKEIVLSGNTIGTEAA----------------------RWLSENIASKKDLEIAEFSDIFTGRVKDEIPEA 82 (386)
T ss_dssp SHHHHHCSCCCEEECTTSEECHHHH----------------------HHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHH
T ss_pred HHHHhcCCCccEEECCCCCCCHHHH----------------------HHHHHHHHhCCCccEEeCcccccCccccchhHH
Confidence 3455666677777777766532100 01234466788899999988644 3444544
Q ss_pred c-------cCCCCCcEEEcccccccc----cccccccccCCCCEEEccCcccCCCCCccccC----C---------cccc
Q 046438 332 L-------SRLEKLQILGLENNQLEG----RILDDICRLARLSSVYLDHNKLSGSIPACFGN----L---------ASLR 387 (851)
Q Consensus 332 ~-------~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----l---------~~L~ 387 (851)
+ ..+++|++|+|++|.+++ .++..+..+++|+.|+|++|.++...+..+.. + ++|+
T Consensus 83 ~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~ 162 (386)
T 2ca6_A 83 LRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLR 162 (386)
T ss_dssp HHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCc
Confidence 4 788999999999999997 46778889999999999999997544444443 3 8999
Q ss_pred ceecccCcCc--cCc---hhhcccCcceEEEecCCCCCC-----CCccccccchhhhhhhccCCccc----ccCCcccCC
Q 046438 388 KLSFASNELT--FVP---STFWNLTNILMVDLSSNPLSG-----SLPLEIGNLKVLVELYLSRNNLS----GDIPTTIGG 453 (851)
Q Consensus 388 ~L~L~~N~l~--~~p---~~~~~l~~L~~L~Ls~N~l~~-----~~p~~~~~l~~L~~L~L~~N~l~----~~~~~~~~~ 453 (851)
+|++++|+++ .+| ..+..+++|+.|+|++|+++. ..|..+..+++|+.|+|++|.++ +.+|..+..
T Consensus 163 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~ 242 (386)
T 2ca6_A 163 SIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242 (386)
T ss_dssp EEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred EEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc
Confidence 9999999997 445 467789999999999999973 34447889999999999999996 567888999
Q ss_pred CCCccEEEccCcccCCC----Ccccc--cCCCCCCEEECCCCcccc----cCCccc-cccccccceeccCccccccCC
Q 046438 454 LKNLQNLSLGDNNLQGS----IPNSI--GDLISLECLDLSNNILSG----IIPSSL-EKLLYLKYLNVSFNRLEGEIP 520 (851)
Q Consensus 454 l~~L~~L~L~~N~l~~~----~~~~~--~~l~~L~~L~Ls~N~l~~----~~p~~l-~~l~~L~~l~l~~N~l~~~~p 520 (851)
+++|+.|+|++|++++. +|..+ +.+++|++|+|++|++++ .+|..+ .++++|+.|++++|++++..|
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 99999999999999865 56666 448999999999999997 488777 668999999999999987654
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=8.3e-23 Score=221.06 Aligned_cols=248 Identities=18% Similarity=0.158 Sum_probs=183.7
Q ss_pred CCCCCCCCCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhcCC
Q 046438 10 PSQLGSLSSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFSYL 87 (851)
Q Consensus 10 p~~l~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l 87 (851)
|+.+..|.. +.++.++++++ .+|..+ .+++++|+|++|+|+.+.+ |.++++|++|||++|++.+.+|...|.++
T Consensus 3 p~~~C~C~~-~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L 78 (350)
T 4ay9_X 3 HHRICHCSN-RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNL 78 (350)
T ss_dssp CCSSSEEET-TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSC
T ss_pred CCCccEeeC-CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcc
Confidence 444444543 67788899998 677666 3688999999999987654 78889999999999998767888888888
Q ss_pred ccccc-ccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccC-ccccCCCCccccCCC-cCcE
Q 046438 88 PFVQF-LSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLS-NNLVGVVPATLFNIS-TLKI 164 (851)
Q Consensus 88 ~~L~~-L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~l~~l~-~L~~ 164 (851)
+++++ +.+++|+++.+.|+.|.++++|++|++++|.++...+..+....++..|++.+ +++..+.+..|..+. .++.
T Consensus 79 ~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~ 158 (350)
T 4ay9_X 79 PKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVI 158 (350)
T ss_dssp TTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEE
T ss_pred hhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhh
Confidence 88775 66677888888888889999999999999998876666777778888888865 567766666777664 6888
Q ss_pred EEeeccccccccchhHhhhccccccccccc-ccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCc
Q 046438 165 LQLTNNTLSGSISSSIRLALPNLELFSLAN-NNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYN 243 (851)
Q Consensus 165 L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 243 (851)
|+|++|+|+ .++...+ ..++|++|++++ |.++...+..|.++++|+.|+|++|+|+.+++..|.++++|+.+++ +
T Consensus 159 L~L~~N~i~-~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~ 234 (350)
T 4ay9_X 159 LWLNKNGIQ-EIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--Y 234 (350)
T ss_dssp EECCSSCCC-EECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--T
T ss_pred hcccccccc-CCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--C
Confidence 888888887 5666665 456788888864 6666555566777888888888888888777766666555555444 2
Q ss_pred cccCCCCcchhhhhccccccccEEeccCC
Q 046438 244 YITSSNHELSFISSLANSKKLKVLSLTGN 272 (851)
Q Consensus 244 ~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N 272 (851)
.++.+| .+..+++|+.++++++
T Consensus 235 ~l~~lP-------~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 235 NLKKLP-------TLEKLVALMEASLTYP 256 (350)
T ss_dssp TCCCCC-------CTTTCCSCCEEECSCH
T ss_pred CcCcCC-------CchhCcChhhCcCCCC
Confidence 344332 3566677777776643
No 345
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=2.3e-22 Score=206.78 Aligned_cols=183 Identities=22% Similarity=0.247 Sum_probs=125.7
Q ss_pred CCcEEeCCCCCCCCCCCcchhcCCcccccccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEc
Q 046438 64 SLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGL 143 (851)
Q Consensus 64 ~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 143 (851)
+.+++|++++.++ .+|..+. +++++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|++
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCeEEecCCCCcc-ccCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 3455666666665 5555432 45666666666666665666666666666666666666666666666666666666
Q ss_pred cCccccCCCCccccCCCcCcEEEeeccccccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCcc
Q 046438 144 LSNNLVGVVPATLFNISTLKILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSG 223 (851)
Q Consensus 144 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~ 223 (851)
++|++++..+..|..+++|++|+|++|+++ .++...+..+++|++|+|++|++++..+..+.++++|+.|+|++|++++
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 169 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQS 169 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCC-CcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCc
Confidence 666666666666666667777777777666 4444555566777777777777776666677778888888888888888
Q ss_pred ccCccccCCCCcceEeccCccccCCCCc
Q 046438 224 FIPNRFHNMRNLKELNLEYNYITSSNHE 251 (851)
Q Consensus 224 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 251 (851)
+.+..|..+++|++|+|++|+++....+
T Consensus 170 ~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 197 (251)
T 3m19_A 170 VPHGAFDRLGKLQTITLFGNQFDCSRCE 197 (251)
T ss_dssp CCTTTTTTCTTCCEEECCSCCBCTTSTT
T ss_pred cCHHHHhCCCCCCEEEeeCCceeCCccc
Confidence 8888888888999999999988875333
No 346
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=7.7e-24 Score=228.41 Aligned_cols=222 Identities=17% Similarity=0.184 Sum_probs=144.0
Q ss_pred CCEEEcCCCcccccccCCCC--CCCcEEeCCCCCCCCCCCcchhcCCcccccccccccccccC-CCccccCCCCccEEec
Q 046438 43 LEILDLSNNQLSGSFPFFNM--SSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGH-LPREIGNLTSLTSIDL 119 (851)
Q Consensus 43 L~~L~Ls~n~l~~~~~~~~~--~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~-~~~~l~~l~~L~~L~L 119 (851)
++.+++++|++.+ ..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. ++..+..+++|++|+|
T Consensus 49 ~~~l~l~~~~~~~-~~~~~~~~~~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L 125 (336)
T 2ast_B 49 WQTLDLTGKNLHP-DVTGRLLSQGVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL 125 (336)
T ss_dssp SSEEECTTCBCCH-HHHHHHHHTTCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEEC
T ss_pred heeeccccccCCH-HHHHhhhhccceEEEcCCccccccchh--hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeC
Confidence 5566666666552 112233 5666666666666643333 23467777777777766643 5566677777777777
Q ss_pred cccccccccchhhcCcccccEEEccCc-cccCC-CCccccCCCcCcEEEeecc-ccccccchhHhhhcc-cccccccccc
Q 046438 120 SENHLMGEIPHEIGNLRNLQALGLLSN-NLVGV-VPATLFNISTLKILQLTNN-TLSGSISSSIRLALP-NLELFSLANN 195 (851)
Q Consensus 120 s~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~l~~l~~L~~L~L~~n-~l~~~~~~~~~~~l~-~L~~L~L~~N 195 (851)
++|.+++..+..++.+++|++|++++| .+++. .+..+.++++|++|++++| .+++......+..++ +|++|++++|
T Consensus 126 ~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 126 EGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp TTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred cCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 777776666667777777777777777 45532 4445666777777777777 776543344455677 7777777777
Q ss_pred --ccc-ccCCccccccCCCcEEecCCCC-CccccCccccCCCCcceEeccCcc-ccCCCCcchhhhhccccccccEEecc
Q 046438 196 --NFS-GKIPSFIFNASKLSICELPDNS-FSGFIPNRFHNMRNLKELNLEYNY-ITSSNHELSFISSLANSKKLKVLSLT 270 (851)
Q Consensus 196 --~i~-~~~~~~~~~~~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~~~l~~l~~L~~L~Ls 270 (851)
.++ +.++..+.++++|+.|++++|. +++..+..+..+++|++|++++|. +.. ..+..+..+++|+.|+++
T Consensus 206 ~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~-----~~~~~l~~~~~L~~L~l~ 280 (336)
T 2ast_B 206 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIP-----ETLLELGEIPTLKTLQVF 280 (336)
T ss_dssp GGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCG-----GGGGGGGGCTTCCEEECT
T ss_pred cccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCH-----HHHHHHhcCCCCCEEecc
Confidence 344 3455566677888888888887 666666778888888888888885 221 122356677788888887
Q ss_pred CC
Q 046438 271 GN 272 (851)
Q Consensus 271 ~N 272 (851)
+|
T Consensus 281 ~~ 282 (336)
T 2ast_B 281 GI 282 (336)
T ss_dssp TS
T ss_pred Cc
Confidence 77
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=1.3e-23 Score=226.58 Aligned_cols=228 Identities=20% Similarity=0.211 Sum_probs=175.5
Q ss_pred cccEEEeecCccccCCCcccccccCCcEEEecCCCCCCC-cCccccCCCCCcEEEcccccccccccccccccCCCCEEEc
Q 046438 289 SMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGS-IPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYL 367 (851)
Q Consensus 289 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 367 (851)
.++.|++++|.+.+..+. +..+++|++|++++|.+++. .+..+..+++|++|++++|.+++..+..+..+++|++|++
T Consensus 71 ~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 149 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 149 (336)
T ss_dssp TCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred cceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEEC
Confidence 455556666666555444 55678888888888887754 6677888888888888888888777888888888888888
Q ss_pred cCc-ccCC-CCCccccCCccccceecccC-cCcc--CchhhcccC-cceEEEecCC--CCC-CCCccccccchhhhhhhc
Q 046438 368 DHN-KLSG-SIPACFGNLASLRKLSFASN-ELTF--VPSTFWNLT-NILMVDLSSN--PLS-GSLPLEIGNLKVLVELYL 438 (851)
Q Consensus 368 ~~N-~l~~-~~~~~~~~l~~L~~L~L~~N-~l~~--~p~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~L 438 (851)
++| .+++ .++..+..+++|++|++++| .++. ++..+..++ +|++|++++| .++ +.+|..+..+++|++|++
T Consensus 150 ~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l 229 (336)
T 2ast_B 150 SGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDL 229 (336)
T ss_dssp TTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEEC
T ss_pred CCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeC
Confidence 888 5664 25666778888999999999 8874 677788888 9999999999 454 356777788899999999
Q ss_pred cCCc-ccccCCcccCCCCCccEEEccCcc-cCCCCcccccCCCCCCEEECCCCcccccCCccccccc-cccceeccCccc
Q 046438 439 SRNN-LSGDIPTTIGGLKNLQNLSLGDNN-LQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLL-YLKYLNVSFNRL 515 (851)
Q Consensus 439 ~~N~-l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~l~l~~N~l 515 (851)
++|. +++..+..+..+++|+.|++++|. +.......++.+++|+.|++++| ++ ...+..+. .++.|++++|++
T Consensus 230 ~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l 305 (336)
T 2ast_B 230 SDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHF 305 (336)
T ss_dssp TTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCS
T ss_pred CCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccC
Confidence 9998 776777888999999999999995 32222236788999999999999 33 23455553 488888999999
Q ss_pred cccCCC
Q 046438 516 EGEIPR 521 (851)
Q Consensus 516 ~~~~p~ 521 (851)
++..|.
T Consensus 306 ~~~~~~ 311 (336)
T 2ast_B 306 TTIARP 311 (336)
T ss_dssp CCTTCS
T ss_pred ccccCC
Confidence 988774
No 348
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.86 E-value=2.1e-22 Score=202.04 Aligned_cols=178 Identities=21% Similarity=0.260 Sum_probs=146.4
Q ss_pred CEEEccCcccCCCCCccccCCccccceecccCcCccCc--hhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccC
Q 046438 363 SSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVP--STFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSR 440 (851)
Q Consensus 363 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 440 (851)
+.+++++|.++. +|..+. +.+++|+|++|+++.++ ..|..+++|+.|+|++|++++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 467777777774 454443 35678888888888774 3478899999999999999977777899999999999999
Q ss_pred CcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCC
Q 046438 441 NNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIP 520 (851)
Q Consensus 441 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p 520 (851)
|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+|+|+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99998778889999999999999999998889999999999999999999999889999999999999999999999998
Q ss_pred CCCcccccCcccccCCcCccCCC
Q 046438 521 RGGTLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 521 ~~~~~~~l~~~~~~~n~~~c~~~ 543 (851)
......++.......+...|+.|
T Consensus 171 l~~l~~~~~~~~~~~~~~~C~~P 193 (220)
T 2v70_A 171 LAWLGEWLRKKRIVTGNPRCQKP 193 (220)
T ss_dssp GHHHHHHHHHSCCBCCCCEEEES
T ss_pred hHHHHHHHHhcCccccCCccCCC
Confidence 65433334333333333478766
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=4.4e-22 Score=215.35 Aligned_cols=125 Identities=18% Similarity=0.072 Sum_probs=58.1
Q ss_pred cCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccC-cccCCCCCccccCCc-cccceecccCcCc
Q 046438 320 GYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDH-NKLSGSIPACFGNLA-SLRKLSFASNELT 397 (851)
Q Consensus 320 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 397 (851)
++|++....|..|..+++|++|++++|.++...+..+....++..+++.+ |++....+..|..+. .++.|+|++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 33444444444444455555555555554444333344444444444433 334433333444443 3555555555555
Q ss_pred cCchhhcccCcceEEEecC-CCCCCCCccccccchhhhhhhccCCccc
Q 046438 398 FVPSTFWNLTNILMVDLSS-NPLSGSLPLEIGNLKVLVELYLSRNNLS 444 (851)
Q Consensus 398 ~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 444 (851)
.+|.......+|+.|++++ |.++...++.|.++++|++|+|++|+|+
T Consensus 168 ~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 168 EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 5555444445555555543 3444222233444455555555555544
No 350
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=3.4e-22 Score=208.17 Aligned_cols=153 Identities=15% Similarity=0.107 Sum_probs=121.2
Q ss_pred HHHHHHHhcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecch------------------hhHHHHHHHHHHHhhc
Q 046438 618 YQELLQATDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLE------------------GALESFNAECEVLRSI 679 (851)
Q Consensus 618 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l 679 (851)
...+......|++.+.||+|+||.||+|++.+|+.||+|+++.... .....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 3444445566788899999999999999997799999999964321 1345688999999999
Q ss_pred CCCcccceeeeeecCCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE
Q 046438 680 RHRNLVRIISSCTNDDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL 759 (851)
Q Consensus 680 ~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill 759 (851)
+ | +++++++.. +..++||||++|++|.+ +.. .....++.|+++|++|| |++||+||||||+||++
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~l---H~~giiHrDlkp~NILl 226 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKF---YHRGIVHGDLSQYNVLV 226 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEE
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHH---HHCCCEeCCCCHHHEEE
Confidence 9 4 666665543 55699999999999987 421 23456999999999999 88999999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCCccccccccCccccCccccc
Q 046438 760 DEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGR 800 (851)
Q Consensus 760 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~ 800 (851)
+ ++.+||+|||+|+.. ..+.|||++.
T Consensus 227 ~-~~~vkl~DFG~a~~~--------------~~~~a~e~l~ 252 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVEV--------------GEEGWREILE 252 (282)
T ss_dssp E-TTEEEECCCTTCEET--------------TSTTHHHHHH
T ss_pred E-CCcEEEEECCCCeEC--------------CCCCHHHHHH
Confidence 9 999999999998643 3457777664
No 351
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.85 E-value=4.4e-22 Score=199.77 Aligned_cols=178 Identities=21% Similarity=0.278 Sum_probs=142.7
Q ss_pred CEEEccCcccCCCCCccccCCccccceecccCcCccCch-hhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCC
Q 046438 363 SSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPS-TFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRN 441 (851)
Q Consensus 363 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 441 (851)
+.+++++|.++ .+|..+. ++|++|++++|+|+.++. .|..+++|+.|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45677777776 3444433 578888888888887765 6788888999999999998777888999999999999999
Q ss_pred cccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCC
Q 046438 442 NLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPR 521 (851)
Q Consensus 442 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~ 521 (851)
+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+|.|+|+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l 170 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHL 170 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCcc
Confidence 99866566789999999999999999988899999999999999999999988888899999999999999999999875
Q ss_pred CCcccccCcccccCCcCccCCC
Q 046438 522 GGTLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 522 ~~~~~~l~~~~~~~n~~~c~~~ 543 (851)
.+...++...........|..|
T Consensus 171 ~~l~~~l~~~~~~~~~~~C~~P 192 (220)
T 2v9t_B 171 KWLADYLHTNPIETSGARCTSP 192 (220)
T ss_dssp HHHHHHHHHCCCBCSCCBEEES
T ss_pred HHHHHHHHhCCCCccCCCcCCc
Confidence 4332233333333444567665
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=1e-20 Score=188.47 Aligned_cols=179 Identities=23% Similarity=0.295 Sum_probs=151.0
Q ss_pred CCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CCCCCCCcEEeCCCCCCCCCCCcchhcCCccccccccc
Q 046438 19 LQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLA 96 (851)
Q Consensus 19 L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~ 96 (851)
-+.++.+++.++ .+|..+ .++|++|+|++|++++..+ +..+++|++|++++|+++ .++...|..+++|++|+|+
T Consensus 9 ~~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls 84 (208)
T 2o6s_A 9 GTTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLS 84 (208)
T ss_dssp TTEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-ccChhhcCCCCCcCEEECC
Confidence 367888888887 566444 4689999999999987665 678899999999999998 7777778899999999999
Q ss_pred ccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeecccccccc
Q 046438 97 FNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNTLSGSI 176 (851)
Q Consensus 97 ~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 176 (851)
+|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|++++|++++..+..+..+++|+.|++++|.+.+
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-- 162 (208)
T 2o6s_A 85 TNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-- 162 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC--
T ss_pred CCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec--
Confidence 999997777778899999999999999997777778999999999999999998877778889999999999998764
Q ss_pred chhHhhhcccccccccccccccccCCccccccC
Q 046438 177 SSSIRLALPNLELFSLANNNFSGKIPSFIFNAS 209 (851)
Q Consensus 177 ~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~ 209 (851)
.+++|++|+++.|++++.+|..+..+.
T Consensus 163 ------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 163 ------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp ------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 457889999999999988887766544
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=3.7e-21 Score=218.59 Aligned_cols=169 Identities=25% Similarity=0.308 Sum_probs=104.1
Q ss_pred cCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceec
Q 046438 312 INLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSF 391 (851)
Q Consensus 312 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 391 (851)
++|++|++++|.|+ .+| ..+++|++|++++|.|++ +|. +.. +|+.|+|++|++++ +|. .+++|+.|++
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 44555555555555 333 234555566666665554 333 333 56666666666654 333 4556666666
Q ss_pred ccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCc-------cEEEccC
Q 046438 392 ASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNL-------QNLSLGD 464 (851)
Q Consensus 392 ~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-------~~L~L~~ 464 (851)
++|+|+.+|. .+++|+.|+|++|++++ +|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++
T Consensus 148 s~N~l~~lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~ 216 (571)
T 3cvr_A 148 DNNQLTMLPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRE 216 (571)
T ss_dssp CSSCCSCCCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCS
T ss_pred CCCccCcCCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCC
Confidence 6666666655 45566666666666664 444 44 66666667766666 4555 443 55 8888888
Q ss_pred cccCCCCcccccCCCCCCEEECCCCcccccCCcccccccc
Q 046438 465 NNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLY 504 (851)
Q Consensus 465 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 504 (851)
|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..++.
T Consensus 217 N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 217 NRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp SCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred Ccce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 8887 57777777888888888888888877777776654
No 354
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=5e-21 Score=217.49 Aligned_cols=182 Identities=23% Similarity=0.296 Sum_probs=158.6
Q ss_pred CCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecc
Q 046438 313 NLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFA 392 (851)
Q Consensus 313 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 392 (851)
+++.|++++|.+++ +|..+ .++|++|+|++|.|+. +| ..+++|+.|+|++|+|++ +|. +.. +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~~-ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALIS-LP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCcc-cc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999986 56555 3789999999999994 45 457999999999999997 666 665 99999999
Q ss_pred cCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCc
Q 046438 393 SNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIP 472 (851)
Q Consensus 393 ~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 472 (851)
+|+|+.+|. .+++|+.|+|++|++++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|
T Consensus 129 ~N~l~~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 129 NNQLTMLPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SSCCSCCCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CCcCCCCCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 999999988 68999999999999996 665 57899999999999996 777 66 89999999999999 677
Q ss_pred ccccCCCCC-------CEEECCCCcccccCCccccccccccceeccCccccccCCC
Q 046438 473 NSIGDLISL-------ECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPR 521 (851)
Q Consensus 473 ~~~~~l~~L-------~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~ 521 (851)
. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|.
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp C-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 7 665 77 99999999999 6888888899999999999999998774
No 355
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=8.6e-21 Score=206.08 Aligned_cols=161 Identities=28% Similarity=0.270 Sum_probs=118.4
Q ss_pred CCEEEccCcccCCCCCcccc-CCccccceecccCcCccCc-hhhcccCcceEEEecCCCCCCCCccccccchhhhhhhcc
Q 046438 362 LSSVYLDHNKLSGSIPACFG-NLASLRKLSFASNELTFVP-STFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLS 439 (851)
Q Consensus 362 L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 439 (851)
++.|+|++|+|++..+..|. .+++|+.|+|++|+|+.++ ..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 44455555555544444454 5666666666666666554 346667777777777777776666677778888888888
Q ss_pred CCcccccCCcccCCCCCccEEEccCcccCCCCcccc---cCCCCCCEEECCCCcccccCCcccccccc--ccceeccCcc
Q 046438 440 RNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSI---GDLISLECLDLSNNILSGIIPSSLEKLLY--LKYLNVSFNR 514 (851)
Q Consensus 440 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~--L~~l~l~~N~ 514 (851)
+|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++..+..+..++. ++.|+|++|+
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~ 200 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNP 200 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSC
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCC
Confidence 888887778888999999999999999985444445 57899999999999999777678888887 4889999999
Q ss_pred ccccCCCC
Q 046438 515 LEGEIPRG 522 (851)
Q Consensus 515 l~~~~p~~ 522 (851)
|.|+|...
T Consensus 201 ~~C~C~l~ 208 (361)
T 2xot_A 201 LECDCKLY 208 (361)
T ss_dssp EECCHHHH
T ss_pred ccCCcCcH
Confidence 99998643
No 356
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=6.6e-20 Score=182.56 Aligned_cols=161 Identities=24% Similarity=0.282 Sum_probs=113.4
Q ss_pred cccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEcc
Q 046438 289 SMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLD 368 (851)
Q Consensus 289 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 368 (851)
+++.|++++|++++..+..+..+++|++|++++|++++..+..|..+++|++|++++|.+++..+..+..+++|+.|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 56666666666665555667777777777777777776666667777777777777777776666666777777777777
Q ss_pred CcccCCCCCccccCCccccceecccCcCccCchh-hcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccC
Q 046438 369 HNKLSGSIPACFGNLASLRKLSFASNELTFVPST-FWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDI 447 (851)
Q Consensus 369 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 447 (851)
+|++++..+..|..+++|+.|++++|+++.+|.. +..+++|+.|++++|.+.+ .+++|++|+++.|+++|.+
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVV 181 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCcee
Confidence 7777766666677777777777777777766553 5667777777777776653 2446777777777777777
Q ss_pred CcccCCCCC
Q 046438 448 PTTIGGLKN 456 (851)
Q Consensus 448 ~~~~~~l~~ 456 (851)
|..++.++.
T Consensus 182 p~~~~~l~~ 190 (208)
T 2o6s_A 182 RNSAGSVAP 190 (208)
T ss_dssp BCTTSSBCT
T ss_pred eccCccccC
Confidence 776665544
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=2.8e-20 Score=195.26 Aligned_cols=173 Identities=25% Similarity=0.321 Sum_probs=93.6
Q ss_pred cccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCcccc
Q 046438 308 MGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLR 387 (851)
Q Consensus 308 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 387 (851)
+..+++|+.|++++|.+... + .+..+++|++|++++|.+++..+ +..+++|+.|++++|+++
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~-------------- 103 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK-------------- 103 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC--------------
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCC--------------
Confidence 34556666666666665533 2 25555555555555555554332 445555555555555554
Q ss_pred ceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCccc
Q 046438 388 KLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNL 467 (851)
Q Consensus 388 ~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 467 (851)
.+|. +..+++|++|++++|++++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++
T Consensus 104 ----------~~~~-l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l 168 (291)
T 1h6t_A 104 ----------DLSS-LKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQI 168 (291)
T ss_dssp ----------CGGG-GTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred ----------CChh-hccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcc
Confidence 4332 44445555555555555432 2344555555555555555532 3455566666666666666
Q ss_pred CCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccc
Q 046438 468 QGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEG 517 (851)
Q Consensus 468 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~ 517 (851)
++..| +..+++|+.|+|++|++++ +| .+..+++|+.|++++|++++
T Consensus 169 ~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 169 SDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred ccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 54333 6666666666666666663 33 25666666666666666654
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=6.5e-20 Score=192.50 Aligned_cols=169 Identities=28% Similarity=0.398 Sum_probs=119.1
Q ss_pred ccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEc
Q 046438 288 LSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYL 367 (851)
Q Consensus 288 ~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 367 (851)
.+|+.|++++|.+... + .+..+++|++|++++|++++..+ +..+++|++|++++|.+++. ..+..+++|+.|++
T Consensus 46 ~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCEEEC
Confidence 4799999999999854 3 58999999999999999997655 99999999999999999863 34777777777777
Q ss_pred cCcccCCCCCccccCCccccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccC
Q 046438 368 DHNKLSGSIPACFGNLASLRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDI 447 (851)
Q Consensus 368 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 447 (851)
++|++.+. ..+..+++|+.|++++|+++.+ ..++.+++|++|++++|++++..
T Consensus 120 ~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-------------------------~~l~~l~~L~~L~L~~N~l~~~~ 172 (291)
T 1h6t_A 120 EHNGISDI--NGLVHLPQLESLYLGNNKITDI-------------------------TVLSRLTKLDTLSLEDNQISDIV 172 (291)
T ss_dssp TTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-------------------------GGGGGCTTCSEEECCSSCCCCCG
T ss_pred CCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-------------------------hhhccCCCCCEEEccCCccccch
Confidence 77777642 3445555555555555555544 23444555555555555555332
Q ss_pred CcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccc
Q 046438 448 PTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSG 493 (851)
Q Consensus 448 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 493 (851)
| +..+++|+.|++++|++++ ++ .+..+++|+.|++++|+++.
T Consensus 173 ~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 173 P--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp G--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred h--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 2 5666677777777777763 34 36777777777777777764
No 359
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.81 E-value=1e-20 Score=185.49 Aligned_cols=155 Identities=26% Similarity=0.341 Sum_probs=118.3
Q ss_pred cceecccCcCccCchhhcccCcceEEEecCCCCCCCCcc-ccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCc
Q 046438 387 RKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPL-EIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDN 465 (851)
Q Consensus 387 ~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 465 (851)
+.+++++|+++.+|..+.. +|+.|++++|++++..+. .|+.+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 5667777777777765543 777788888887755553 3777888888888888888777888888888888888888
Q ss_pred ccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCCcccccCcccccCCcCccCCC
Q 046438 466 NLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGTLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 466 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~~ 543 (851)
+|++..+..|.++++|++|+|++|+|++..|..+..+++|+.|+|++|+|+|+++......++....+.++...|+.|
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 888777777888888888888888888888888888888888888888888888754444445555556666777766
No 360
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=8.4e-20 Score=184.43 Aligned_cols=157 Identities=25% Similarity=0.238 Sum_probs=120.2
Q ss_pred CCEEEccCcccCCCCCccccCCccccceecccCcCccC-chhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccC
Q 046438 362 LSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFV-PSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSR 440 (851)
Q Consensus 362 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 440 (851)
.+.++++++++. .+|..+. ++|+.|+|++|+++.+ |..+..+++|+.|+|++|+++...+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 344666666665 3343332 5677777777777755 44566777777777777777755556677788888888888
Q ss_pred CcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCC
Q 046438 441 NNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIP 520 (851)
Q Consensus 441 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p 520 (851)
|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+++|+.|++++|+|+|.|+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 8888666667888899999999999998 788888999999999999999997777788889999999999999999887
Q ss_pred CC
Q 046438 521 RG 522 (851)
Q Consensus 521 ~~ 522 (851)
..
T Consensus 177 ~~ 178 (229)
T 3e6j_A 177 DI 178 (229)
T ss_dssp GG
T ss_pred hh
Confidence 43
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.8e-19 Score=207.21 Aligned_cols=186 Identities=22% Similarity=0.310 Sum_probs=138.8
Q ss_pred cccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCcccc
Q 046438 308 MGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLR 387 (851)
Q Consensus 308 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 387 (851)
+..+++|+.|++++|.+... + .+..+++|+.|+|++|.+++..+ +..+++|+.|+|++|++.+ ++ .+..+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 56677788888888887743 3 47778888888888888886554 7788888888888888875 23 677788888
Q ss_pred ceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCccc
Q 046438 388 KLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNL 467 (851)
Q Consensus 388 ~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 467 (851)
.|+|++|+++.++ .+..+++|+.|+|++|++++. ..++.+++|+.|+|++|+|++..| +..+++|+.|+|++|+|
T Consensus 113 ~L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 113 SLSLEHNGISDIN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp EEECTTSCCCCCG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEEecCCCCCCCc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCC
Confidence 8888888888764 477788888888888888754 567778888888888888876544 77888888888888888
Q ss_pred CCCCcccccCCCCCCEEECCCCcccccCCcccccccccc
Q 046438 468 QGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLK 506 (851)
Q Consensus 468 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 506 (851)
++ +| .+..+++|+.|+|++|++++.....+..+..+.
T Consensus 188 ~~-l~-~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~~~ 224 (605)
T 1m9s_A 188 SD-LR-ALAGLKNLDVLELFSQECLNKPINHQSNLVVPN 224 (605)
T ss_dssp CB-CG-GGTTCTTCSEEECCSEEEECCCCCCCSSCEEEC
T ss_pred CC-Ch-HHccCCCCCEEEccCCcCcCCcccccccEEecc
Confidence 74 33 577888888888888888765444444444333
No 362
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=3.9e-19 Score=178.24 Aligned_cols=155 Identities=22% Similarity=0.267 Sum_probs=132.3
Q ss_pred CCEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc---CCCCCCCcEEeCCCCCCCCCCCcchhcCCcccccccc
Q 046438 19 LQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP---FFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSL 95 (851)
Q Consensus 19 L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~---~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L 95 (851)
-+.+++++|.++ .+|..+. ..+++|+|++|++++..+ +..+++|++|+|++|+|+ .++...|..+++|++|+|
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~-~i~~~~~~~l~~L~~L~L 88 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT-DIEEGAFEGASGVNEILL 88 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEEC
T ss_pred CCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCC-EECHHHhCCCCCCCEEEC
Confidence 468999999998 5676553 456899999999987644 678899999999999998 677767889999999999
Q ss_pred cccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeeccccccc
Q 046438 96 AFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNTLSGS 175 (851)
Q Consensus 96 ~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 175 (851)
++|+|++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|+|++|.+...
T Consensus 89 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 89 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 99999988888899999999999999999988888899999999999999999988888899999999999999988755
Q ss_pred cc
Q 046438 176 IS 177 (851)
Q Consensus 176 ~~ 177 (851)
.+
T Consensus 169 c~ 170 (220)
T 2v70_A 169 CY 170 (220)
T ss_dssp GG
T ss_pred Cc
Confidence 44
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=1.7e-19 Score=207.47 Aligned_cols=144 Identities=19% Similarity=0.291 Sum_probs=72.2
Q ss_pred CCEEeCcCCCCccCCCccccCCCCCCEEEcCCCcccccccCCCCCCCcEEeCCCCCCCCCCCcchhcCCccccccccccc
Q 046438 19 LQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFPFFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFN 98 (851)
Q Consensus 19 L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N 98 (851)
+..++++.+.+++..+ +..+.+|+.|+|++|.+.+..++..+++|++|+|++|+++ .+++ +..+++|++|+|++|
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l~~l~~l~~L~~L~Ls~N~l~-~~~~--l~~l~~L~~L~Ls~N 97 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLT-DIKP--LTNLKNLGWLFLDEN 97 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCCTTGGGCTTCCEEECTTSCCC-CCGG--GGGCTTCCEEECCSS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCChHHccCCCCCEEEeeCCCCC-CChh--hccCCCCCEEECcCC
Confidence 4444555555543333 4455555555555555554444555555555555555555 2332 445555555555555
Q ss_pred ccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeeccccc
Q 046438 99 QFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNTLS 173 (851)
Q Consensus 99 ~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 173 (851)
.|++. | .+..+++|++|+|++|.+.+ + ..+..+++|+.|+|++|++.+. ..+..+++|+.|+|++|.++
T Consensus 98 ~l~~l-~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~ 166 (605)
T 1m9s_A 98 KIKDL-S-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 166 (605)
T ss_dssp CCCCC-T-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCC
T ss_pred CCCCC-h-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCC
Confidence 55431 2 45555555555555555543 2 2344555555555555555443 34444455555555555444
No 364
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=2.4e-19 Score=179.72 Aligned_cols=156 Identities=22% Similarity=0.256 Sum_probs=142.4
Q ss_pred ccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCc
Q 046438 386 LRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDN 465 (851)
Q Consensus 386 L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 465 (851)
-+.+++++|+++.+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|+|++..|+.|.++++|++|+|++|
T Consensus 13 ~~~v~c~~~~l~~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 13 NNIVDCRGKGLTEIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TTEEECTTSCCSSCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CCEEEcCCCCcCcCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 3678999999999998765 78999999999999888889999999999999999999888999999999999999999
Q ss_pred ccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCC-CCcccccCcccccCCcCccCCC
Q 046438 466 NLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPR-GGTLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 466 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~-~~~~~~l~~~~~~~n~~~c~~~ 543 (851)
+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++..+. ...+..+..+.+.+|++.|++.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 99976667789999999999999999999999999999999999999999988774 3457888889999999999765
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=1.8e-19 Score=195.64 Aligned_cols=126 Identities=26% Similarity=0.308 Sum_probs=55.5
Q ss_pred CEEeCcCCCCccCCCccccCCCCCCEEEcCCCccccccc--CC-CCCCCcEEeCCCCCCCCCCCcchhcCCccccccccc
Q 046438 20 QYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFP--FF-NMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLA 96 (851)
Q Consensus 20 ~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~-~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~ 96 (851)
+.+++++++++ .+|..+. ..+++|+|++|+|++..+ +. .+++|++|+|++|+|+ .+++..|..+++|++|+|+
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~-~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCC-ccChhhccCCCCCCEEECC
Confidence 45555555555 3443332 234555555555544332 22 4444444444444444 3333334444444444444
Q ss_pred ccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCcccc
Q 046438 97 FNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLV 149 (851)
Q Consensus 97 ~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 149 (851)
+|+|+...+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC
Confidence 44444333334444444444444444444333444444444444444444444
No 366
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.78 E-value=1.5e-19 Score=176.93 Aligned_cols=154 Identities=23% Similarity=0.226 Sum_probs=122.2
Q ss_pred cceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcc
Q 046438 387 RKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNN 466 (851)
Q Consensus 387 ~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 466 (851)
+.+++++|+++.+|..+. ++|+.|+|++|.++ .+|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 457777777777776543 57888888888887 667788888888888888888887777889999999999999999
Q ss_pred cCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCCcccccCcccccCCcCccCCC
Q 046438 467 LQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGTLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 467 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~~ 543 (851)
|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|+|.|+|.......++.......+...|..|
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~~~~~~~~~~~~~~~C~~P 166 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGP 166 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHHHHSSCCCSCCBEEES
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHHHHHHHhccCCCCCcCcCCc
Confidence 99888888999999999999999999777778999999999999999999998754333333332233444567666
No 367
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=4.2e-19 Score=174.89 Aligned_cols=154 Identities=16% Similarity=0.217 Sum_probs=118.6
Q ss_pred cccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhh
Q 046438 357 CRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVEL 436 (851)
Q Consensus 357 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 436 (851)
..+++|+.|++++|.+. .+| .+..+++|++|++++|.++.++ .+..+++|++|++++|++++..|..++.+++|++|
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNYN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCCG-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcch-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 34455566666666665 333 4666677777777777666554 57778888888888888887778888888999999
Q ss_pred hccCCcccccCCcccCCCCCccEEEccCcc-cCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccc
Q 046438 437 YLSRNNLSGDIPTTIGGLKNLQNLSLGDNN-LQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRL 515 (851)
Q Consensus 437 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l 515 (851)
++++|++++..|..++.+++|++|++++|+ ++ .+| .+..+++|+.|++++|++++ ++ .+..+++|+.|++++|++
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC--
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCccc
Confidence 999999987778888999999999999998 65 566 68889999999999999985 44 788899999999999987
Q ss_pred cc
Q 046438 516 EG 517 (851)
Q Consensus 516 ~~ 517 (851)
.+
T Consensus 194 ~~ 195 (197)
T 4ezg_A 194 GG 195 (197)
T ss_dssp --
T ss_pred CC
Confidence 54
No 368
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=1.3e-19 Score=194.22 Aligned_cols=233 Identities=13% Similarity=0.087 Sum_probs=155.7
Q ss_pred ccccCCCCCC--CCCCCEEeCcCCCCccCCCccccC-CCCCCEEEcCCCcccccc-cCCCCCCCcEEeCCCCCCCCCCCc
Q 046438 6 TGTVPSQLGS--LSSLQYLDLSFNQLLGTIPSSIFS-INTLEILDLSNNQLSGSF-PFFNMSSLQVIDLSDNRLSGELPA 81 (851)
Q Consensus 6 ~~~~p~~l~~--l~~L~~L~ls~n~l~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~ 81 (851)
.|+++..+.. +.+++.|.++++ +....-..+.. +++|++|||++|++.... ....++.++.+++..| .+|.
T Consensus 12 ~g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~----~I~~ 86 (329)
T 3sb4_A 12 PGTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMAN----FVPA 86 (329)
T ss_dssp TTCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTT----EECT
T ss_pred CCcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcccccccccccccccc----ccCH
Confidence 4566666654 778999999876 22222223444 888999999999998211 1223333566666666 4677
Q ss_pred chhcC--------CcccccccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCc----ccc
Q 046438 82 NIFSY--------LPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSN----NLV 149 (851)
Q Consensus 82 ~~~~~--------l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n----~l~ 149 (851)
..|.+ +++|+.|+|.+ .++.+.+.+|.+|++|+.|+++.|.+....+.+|.++.++..+.+..+ ...
T Consensus 87 ~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~ 165 (329)
T 3sb4_A 87 YAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKN 165 (329)
T ss_dssp TTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTST
T ss_pred HHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccc
Confidence 78888 99999999999 888788889999999999999999998788889999888888877653 234
Q ss_pred CCCCccccCCCcCc-EEEeeccccccccchhHhhh---cccccccccccccccccCCccccccCCCcEEecCCCCCcccc
Q 046438 150 GVVPATLFNISTLK-ILQLTNNTLSGSISSSIRLA---LPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFI 225 (851)
Q Consensus 150 ~~~~~~l~~l~~L~-~L~L~~n~l~~~~~~~~~~~---l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 225 (851)
......|.++..|+ .+++.... .++..++.. ..+++.+.+.++-...........+++|+.++|++|+++.+.
T Consensus 166 ~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~ 242 (329)
T 3sb4_A 166 RWEHFAFIEGEPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIP 242 (329)
T ss_dssp TTTTSCEEESCCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEEC
T ss_pred cccccccccccccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceec
Confidence 44556777888887 56665432 344444332 455566655554221111111123577777777777777777
Q ss_pred CccccCCCCcceEeccCccccCC
Q 046438 226 PNRFHNMRNLKELNLEYNYITSS 248 (851)
Q Consensus 226 ~~~~~~l~~L~~L~L~~N~i~~~ 248 (851)
+.+|.++.+|++|+|.+| ++.+
T Consensus 243 ~~aF~~~~~L~~l~l~~n-i~~I 264 (329)
T 3sb4_A 243 DFTFAQKKYLLKIKLPHN-LKTI 264 (329)
T ss_dssp TTTTTTCTTCCEEECCTT-CCEE
T ss_pred HhhhhCCCCCCEEECCcc-ccee
Confidence 777777777777777766 5443
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=8.8e-22 Score=225.14 Aligned_cols=154 Identities=23% Similarity=0.229 Sum_probs=111.2
Q ss_pred ccccccccccccCCCCEEE-ccCcccCCCCCccccCCccccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccc
Q 046438 348 LEGRILDDICRLARLSSVY-LDHNKLSGSIPACFGNLASLRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLE 426 (851)
Q Consensus 348 l~~~~~~~~~~l~~L~~L~-L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 426 (851)
+.+..|..+..+++|+.|+ ++.|.+ ..|+.+.+++|.++.+|.. .|+.|+|++|.+++ +|.
T Consensus 397 ~~~~~~~~l~~l~~L~~L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~~-----~L~~L~Ls~n~l~~-lp~- 458 (567)
T 1dce_A 397 PLLYEKETLQYFSTLKAVDPMRAAYL-----------DDLRSKFLLENSVLKMEYA-----DVRVLHLAHKDLTV-LCH- 458 (567)
T ss_dssp TGGGHHHHHHHHHHHHHHCGGGHHHH-----------HHHHHHHHHHHHHHHHHHT-----TCSEEECTTSCCSS-CCC-
T ss_pred cccCCHHHHHHHHhcccCcchhhccc-----------chhhhhhhhcccccccCcc-----CceEEEecCCCCCC-CcC-
Confidence 4445566666667777666 555543 2455666666666655432 47778888888874 565
Q ss_pred cccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccC-Cccccccccc
Q 046438 427 IGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGII-PSSLEKLLYL 505 (851)
Q Consensus 427 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L 505 (851)
|+.+++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.. |..+..+++|
T Consensus 459 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L 535 (567)
T 1dce_A 459 LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRL 535 (567)
T ss_dssp GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTC
T ss_pred ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCC
Confidence 777888888888888887 677788888888888888888874 56 6788888888888888888665 7788888888
Q ss_pred cceeccCccccccCCCC
Q 046438 506 KYLNVSFNRLEGEIPRG 522 (851)
Q Consensus 506 ~~l~l~~N~l~~~~p~~ 522 (851)
+.|+|++|++++.+|..
T Consensus 536 ~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 536 VLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp CEEECTTSGGGGSSSCT
T ss_pred CEEEecCCcCCCCccHH
Confidence 88888888888777644
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=1.2e-19 Score=187.17 Aligned_cols=171 Identities=25% Similarity=0.336 Sum_probs=90.0
Q ss_pred cccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccce
Q 046438 310 NLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKL 389 (851)
Q Consensus 310 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 389 (851)
.+.++..+++++|.+++.. .+..+++|++|++++|.++.. + .+..+++|+.|+|++|++++..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 3455555666666665322 355566666666666666532 2 44555555555555555553332 5555555555
Q ss_pred ecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCC
Q 046438 390 SFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQG 469 (851)
Q Consensus 390 ~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 469 (851)
++++|+++.+|.... ++|+.|+|++|+ +++ ++ .+..+++|+.|+|++|++++
T Consensus 91 ~L~~N~l~~l~~~~~--~~L~~L~L~~N~------------------------l~~-~~-~l~~l~~L~~L~Ls~N~i~~ 142 (263)
T 1xeu_A 91 SVNRNRLKNLNGIPS--ACLSRLFLDNNE------------------------LRD-TD-SLIHLKNLEILSIRNNKLKS 142 (263)
T ss_dssp ECCSSCCSCCTTCCC--SSCCEEECCSSC------------------------CSB-SG-GGTTCTTCCEEECTTSCCCB
T ss_pred ECCCCccCCcCcccc--CcccEEEccCCc------------------------cCC-Ch-hhcCcccccEEECCCCcCCC
Confidence 555555554443211 444444444444 442 22 35555555555555555553
Q ss_pred CCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCcccccc
Q 046438 470 SIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGE 518 (851)
Q Consensus 470 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~ 518 (851)
++ .++.+++|+.|+|++|++++. ..+..+++|+.|++++|++++.
T Consensus 143 -~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 143 -IV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -CG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -Ch-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 22 455555666666666666543 4455566666666666666554
No 371
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=3.6e-18 Score=172.42 Aligned_cols=155 Identities=24% Similarity=0.221 Sum_probs=99.8
Q ss_pred CcEEeCCCCCCCCCCCcchhcCCcccccccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEcc
Q 046438 65 LQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLL 144 (851)
Q Consensus 65 L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 144 (851)
-+.+++++++++ .+|..+ .++|++|+|++|.|++..|..|.++++|++|+|++|.++...+..|..+++|++|+|+
T Consensus 21 ~~~v~c~~~~l~-~ip~~~---~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGI---PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp TTEEECTTSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEeEccCCCcC-ccCCCC---CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 345677777766 666543 2566666666666666666666667777777777777665555556666666666666
Q ss_pred CccccCCCCccccCCCcCcEEEeeccccccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccc
Q 046438 145 SNNLVGVVPATLFNISTLKILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGF 224 (851)
Q Consensus 145 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~ 224 (851)
+|++++..+..|..+++|+.|+|++|+|+ . +|..+.++++|+.|+|++|+++++
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~-------------------------lp~~~~~l~~L~~L~L~~N~l~~~ 150 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT-E-------------------------LPRGIERLTHLTHLALDQNQLKSI 150 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC-S-------------------------CCTTGGGCTTCSEEECCSSCCCCC
T ss_pred CCcCCccChhHhCcchhhCeEeccCCccc-c-------------------------cCcccccCCCCCEEECCCCcCCcc
Confidence 66666655555666666666666666655 3 333444555666666666666666
Q ss_pred cCccccCCCCcceEeccCccccCCC
Q 046438 225 IPNRFHNMRNLKELNLEYNYITSSN 249 (851)
Q Consensus 225 ~~~~~~~l~~L~~L~L~~N~i~~~~ 249 (851)
.+..|..+++|++|+|++|++....
T Consensus 151 ~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 151 PHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CHHHHhCCCCCCEEEeeCCCccCCc
Confidence 6666777777777888777776543
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=5.8e-19 Score=173.91 Aligned_cols=153 Identities=16% Similarity=0.194 Sum_probs=85.1
Q ss_pred cCCCCCCEEEcCCCcccccccCCCCCCCcEEeCCCCCCCCCCCcchhcCCcccccccccccccccCCCccccCCCCccEE
Q 046438 38 FSINTLEILDLSNNQLSGSFPFFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSI 117 (851)
Q Consensus 38 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L 117 (851)
..+++|++|++++|++++...+..+++|++|++++|.++ .++ .+..+++|++|+|++|++++..+..++.+++|++|
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~~l~~l~~L~~L~l~~n~~~-~~~--~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLTGIEYAHNIKDLTINNIHAT-NYN--PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCTTGGGCTTCSEEEEESCCCS-CCG--GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hhcCCccEEeccCCCccChHHHhcCCCCCEEEccCCCCC-cch--hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 344455555555555554334445555555555555443 222 24555666666666666655555556666666666
Q ss_pred eccccccccccchhhcCcccccEEEccCcc-ccCCCCccccCCCcCcEEEeeccccccccchhHhhhccccccccccccc
Q 046438 118 DLSENHLMGEIPHEIGNLRNLQALGLLSNN-LVGVVPATLFNISTLKILQLTNNTLSGSISSSIRLALPNLELFSLANNN 196 (851)
Q Consensus 118 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~ 196 (851)
+|++|.+++..|..++.+++|++|++++|+ +.. +| .+..+++|+.|++++|++++ ++ .+..+++|++|++++|+
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~-~~--~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHD-YR--GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCC-CT--TGGGCSSCCEEEECBC-
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcC-hH--HhccCCCCCEEEeeCcc
Confidence 666666665556666666666666666665 443 23 45666666666666666653 22 23456666666666666
Q ss_pred cc
Q 046438 197 FS 198 (851)
Q Consensus 197 i~ 198 (851)
|.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 54
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=5.7e-19 Score=182.20 Aligned_cols=152 Identities=19% Similarity=0.243 Sum_probs=119.0
Q ss_pred ccccccCCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccc
Q 046438 307 EMGNLINLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASL 386 (851)
Q Consensus 307 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 386 (851)
.+..+++|+.|++++|.++. ++ .+..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ . .. ++|
T Consensus 36 ~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l~~-~-~~-~~L 108 (263)
T 1xeu_A 36 SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNLNG-I-PS-ACL 108 (263)
T ss_dssp CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCCTT-C-CC-SSC
T ss_pred chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCcCc-c-cc-Ccc
Confidence 46778888888888888874 34 67888889999999998887655 8888889999999998886433 2 22 889
Q ss_pred cceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcc
Q 046438 387 RKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNN 466 (851)
Q Consensus 387 ~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 466 (851)
++|++++|+++.++ .+..+++|+.|+|++|++++. + .++.+++|++|++++|++++. ..+..+++|+.|++++|+
T Consensus 109 ~~L~L~~N~l~~~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 109 SRLFLDNNELRDTD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp CEEECCSSCCSBSG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEE
T ss_pred cEEEccCCccCCCh-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCc
Confidence 99999999999876 488888999999999988854 3 577777788888888887754 567777777778887777
Q ss_pred cCCC
Q 046438 467 LQGS 470 (851)
Q Consensus 467 l~~~ 470 (851)
+.+.
T Consensus 184 ~~~~ 187 (263)
T 1xeu_A 184 CVNE 187 (263)
T ss_dssp EECC
T ss_pred ccCC
Confidence 7643
No 374
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=2.8e-20 Score=212.73 Aligned_cols=100 Identities=24% Similarity=0.306 Sum_probs=58.1
Q ss_pred hhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccC
Q 046438 433 LVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSF 512 (851)
Q Consensus 433 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~ 512 (851)
|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|++ +| .+..+++|+.|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 5556666666653 444 666666666666666665 555566666666666666666664 44 556666666666666
Q ss_pred ccccccC-C-CCCcccccCcccccCCc
Q 046438 513 NRLEGEI-P-RGGTLANFTSESFMGND 537 (851)
Q Consensus 513 N~l~~~~-p-~~~~~~~l~~~~~~~n~ 537 (851)
|++++.. | ....+..+..+.+.+|+
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~ 544 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNS 544 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSG
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCc
Confidence 6666553 3 22345555555555554
No 375
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=5.3e-19 Score=208.74 Aligned_cols=196 Identities=20% Similarity=0.221 Sum_probs=117.9
Q ss_pred CCcceEeccCccccCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCccccccc
Q 046438 233 RNLKELNLEYNYITSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLI 312 (851)
Q Consensus 233 ~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~ 312 (851)
+.++.|+|.+|.+...+ ...|+.++|+.|.+ ..+++..|++. ..|..+..++
T Consensus 173 ~~~~~l~L~~n~~~~~~-----------~~~l~~l~Ls~~~i----------------~~~~~~~n~~~-~~~~~~~~l~ 224 (727)
T 4b8c_D 173 PLTPKIELFANGKDEAN-----------QALLQHKKLSQYSI----------------DEDDDIENRMV-MPKDSKYDDQ 224 (727)
T ss_dssp -----------------------------------------------------------------------------CCC
T ss_pred CccceEEeeCCCCCcch-----------hhHhhcCccCcccc----------------cCcccccccee-cChhhhccCC
Confidence 34566666666655422 12345555555543 23445556655 5677888899
Q ss_pred CCcEEEecCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecc
Q 046438 313 NLIIIRLGYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFA 392 (851)
Q Consensus 313 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 392 (851)
+|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..+..+++|+.|+|++|+|+ .+|..|+.+++|++|+|+
T Consensus 225 ~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~ 301 (727)
T 4b8c_D 225 LWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFF 301 (727)
T ss_dssp CCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECC
T ss_pred CCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECC
Confidence 9999999999988 56666778999999999999998 67788889999999999999998 678889999999999999
Q ss_pred cCcCccCchhhcccCcceEEEecCCCCCCCCccccccchh-hhhhhccCCcccccCCcccCCCCCccEEEccCc
Q 046438 393 SNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKV-LVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDN 465 (851)
Q Consensus 393 ~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 465 (851)
+|.|+.+|..|+.+++|+.|+|++|++++.+|..+..+.. +..|+|++|.+++.+|.. |+.|++++|
T Consensus 302 ~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 302 DNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp SSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred CCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 9999999988999999999999999999888888766543 345788999988777754 455667666
No 376
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=8.4e-19 Score=180.37 Aligned_cols=137 Identities=17% Similarity=0.231 Sum_probs=107.3
Q ss_pred CCCccceeccccceEEEEEEE-cCCcE--EEEEEEeecchh------------------------hHHHHHHHHHHHhhc
Q 046438 627 QFNVNNLIGSGSFGSVYRGRF-LDGME--VAIKVFHLQLEG------------------------ALESFNAECEVLRSI 679 (851)
Q Consensus 627 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l 679 (851)
-|++.+.||+|+||.||+|++ .+|+. ||||+++..... ....+.+|+++++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999998 68888 999997643211 113678999999999
Q ss_pred CCCcc--cceeeeeecCCeeEEEEeccCC-C----ChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcC-CCCcEecC
Q 046438 680 RHRNL--VRIISSCTNDDFKALVLDYMPK-G----SLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGH-PNPVVHCD 751 (851)
Q Consensus 680 ~h~ni--v~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h-~~~ivH~D 751 (851)
+|+++ +.+++. +..++||||+++ | +|.+.... .++..+..++.|++.|++|| | ++||+|||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~l---H~~~givHrD 196 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRL---YQEAELVHAD 196 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHH---HHTSCEECSS
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHH---HHHCCEEeCC
Confidence 88864 334432 356899999943 3 66655422 22446678999999999999 7 88999999
Q ss_pred CCCCCEEECCCCcEEEeeccCcccc
Q 046438 752 IKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 752 l~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
|||+||+++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999765
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=3.7e-18 Score=167.17 Aligned_cols=175 Identities=22% Similarity=0.271 Sum_probs=137.9
Q ss_pred CEEEccCcccCCCCCccccCCccccceecccCcCccCchh--hcccCcceEEEecCCCCCCCCccccccchhhhhhhccC
Q 046438 363 SSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPST--FWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSR 440 (851)
Q Consensus 363 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 440 (851)
+.+++++|++. .+|..+.. +|++|++++|+++.++.. +..+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56777777776 45554432 788899999999888753 88899999999999999988899999999999999999
Q ss_pred CcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCC
Q 046438 441 NNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIP 520 (851)
Q Consensus 441 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p 520 (851)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+++..+.. .-...++...+.++...|.-|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~-~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA-WFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGH-HHHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcch-HHHHHHHHcCCCCCCCCCCCC
Confidence 9999888888999999999999999999988999999999999999999999765521 111234445667777777766
Q ss_pred CCCcccccCcccccCCcCccCCC
Q 046438 521 RGGTLANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 521 ~~~~~~~l~~~~~~~n~~~c~~~ 543 (851)
.. +....-.++..+...|..+
T Consensus 167 ~~--l~~~~l~~l~~~~~~C~~~ 187 (192)
T 1w8a_A 167 SK--VRDVQIKDLPHSEFKCSSE 187 (192)
T ss_dssp TT--TTTSBGGGSCTTTCCCCCC
T ss_pred hH--HcCCChhhCcHhhcCcCCC
Confidence 53 3444444556666677654
No 378
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=5.2e-19 Score=208.74 Aligned_cols=150 Identities=25% Similarity=0.275 Sum_probs=80.2
Q ss_pred cCCCCCCCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccC
Q 046438 320 GYNKLNGSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFV 399 (851)
Q Consensus 320 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 399 (851)
+.|.+. ..+..+..++.|+.|+|++|.+. .++..+..+++|++|+|++|+|+ .+|..|..+++|+.|+|++|+|+.+
T Consensus 209 ~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~l 285 (727)
T 4b8c_D 209 IENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSL 285 (727)
T ss_dssp --------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSC
T ss_pred ccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCcc
Confidence 334443 44555666666666666666666 34444445666666666666666 4555566666666666666666666
Q ss_pred chhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCC-ccEEEccCcccCCCCcc
Q 046438 400 PSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKN-LQNLSLGDNNLQGSIPN 473 (851)
Q Consensus 400 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~ 473 (851)
|..++.+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|+|++.+|..+..+.. +..|+|++|.+++.+|.
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred ChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 666666666666666666665 45555666666666666666666555555543322 12355666666655554
No 379
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=1.2e-17 Score=178.81 Aligned_cols=224 Identities=13% Similarity=0.093 Sum_probs=110.6
Q ss_pred cccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCCCcchhhhhcccccc
Q 046438 184 LPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSNHELSFISSLANSKK 263 (851)
Q Consensus 184 l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~l~~l~~ 263 (851)
+++|+.|+|.+ .++.+.+.+|.++++|+.+++++|.+..+.+.+|.++.++..+.+..+........+ .-..+..+..
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i-~~~~f~~~~~ 177 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRW-EHFAFIEGEP 177 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTT-TTSCEEESCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccc-cccccccccc
Confidence 66677777766 666666666777777777777777777777777777777776666553221000000 0112344445
Q ss_pred cc-EEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCCCCcCcccc-CCCCCcEE
Q 046438 264 LK-VLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLNGSIPSTLS-RLEKLQIL 341 (851)
Q Consensus 264 L~-~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L 341 (851)
|+ .+++..... ++..+... -....++..+.+.++-.. .....+. .+++|+.|
T Consensus 178 L~~~i~~~~~~~----l~~~~~~~---------------------~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l 231 (329)
T 3sb4_A 178 LETTIQVGAMGK----LEDEIMKA---------------------GLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSL 231 (329)
T ss_dssp CEEEEEECTTCC----HHHHHHHT---------------------TCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEE
T ss_pred cceeEEecCCCc----HHHHHhhc---------------------ccCccccceEEEeeeecH-HHHHHHHHhcCCCeEE
Confidence 55 344333211 11111110 011223333333322111 1111111 14455555
Q ss_pred EcccccccccccccccccCCCCEEEccCcccCCCCCccccCCcccc-ceecccCcCccCc-hhhcccCcceEEEecCCCC
Q 046438 342 GLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLASLR-KLSFASNELTFVP-STFWNLTNILMVDLSSNPL 419 (851)
Q Consensus 342 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~p-~~~~~l~~L~~L~Ls~N~l 419 (851)
+|++|.++.+....|..+.+|+.++|.+| +..+.+.+|.++++|+ .+++.+ .++.++ .+|.++++|+.+++++|.+
T Consensus 232 ~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i 309 (329)
T 3sb4_A 232 DISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKI 309 (329)
T ss_dssp ECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCC
T ss_pred ECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCcc
Confidence 55555555444444555555555555554 4444455555555555 555555 455443 3555566666666666666
Q ss_pred CCCCccccccchhhhhhh
Q 046438 420 SGSLPLEIGNLKVLVELY 437 (851)
Q Consensus 420 ~~~~p~~~~~l~~L~~L~ 437 (851)
+...+.+|.++++|+.|+
T Consensus 310 ~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 310 TTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CEECTTTTCTTCCCCEEE
T ss_pred CccchhhhcCCcchhhhc
Confidence 555555666666665554
No 380
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.70 E-value=2.9e-17 Score=158.72 Aligned_cols=137 Identities=24% Similarity=0.230 Sum_probs=115.9
Q ss_pred ccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCc
Q 046438 386 LRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDN 465 (851)
Q Consensus 386 L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 465 (851)
.+.+++++|+++.+|..+. ++|+.|++++|++++..+..|+.+++|++|++++|++++..+..|..+++|+.|++++|
T Consensus 9 ~~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TTEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEecCCCCccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 4677788888888876543 68888999999988777777888899999999999998666677899999999999999
Q ss_pred ccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCCc
Q 046438 466 NLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGT 524 (851)
Q Consensus 466 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~ 524 (851)
+|++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|+|+|.+|...+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l~~ 145 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 145 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHHHHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCccHHH
Confidence 99977777789999999999999999977776778899999999999999999884433
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=9.4e-17 Score=153.64 Aligned_cols=132 Identities=25% Similarity=0.227 Sum_probs=55.8
Q ss_pred CCCCEEEccCcccC-CCCCccccCCccccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhc
Q 046438 360 ARLSSVYLDHNKLS-GSIPACFGNLASLRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYL 438 (851)
Q Consensus 360 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 438 (851)
++|+.|++++|++. +.+|..+..+++|+.|++++|.++.+ ..+..+++|++|+|++|++++.+|..+..+++|++|++
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 33444444444443 33344444444444444444444444 33444444444444444444333333333444444444
Q ss_pred cCCcccccC-CcccCCCCCccEEEccCcccCCCCc---ccccCCCCCCEEECCCCccc
Q 046438 439 SRNNLSGDI-PTTIGGLKNLQNLSLGDNNLQGSIP---NSIGDLISLECLDLSNNILS 492 (851)
Q Consensus 439 ~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~ 492 (851)
++|++++.. +..+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 444443211 1334444444444444444442222 23444444444444444443
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=8.4e-17 Score=153.97 Aligned_cols=134 Identities=23% Similarity=0.239 Sum_probs=120.9
Q ss_pred CccccceecccCcCc--cCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEE
Q 046438 383 LASLRKLSFASNELT--FVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNL 460 (851)
Q Consensus 383 l~~L~~L~L~~N~l~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 460 (851)
.++|++|++++|+++ .+|..+..+++|++|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 478999999999999 8999899999999999999999965 789999999999999999997788888889999999
Q ss_pred EccCcccCCCC-cccccCCCCCCEEECCCCcccccCC---ccccccccccceeccCcccccc
Q 046438 461 SLGDNNLQGSI-PNSIGDLISLECLDLSNNILSGIIP---SSLEKLLYLKYLNVSFNRLEGE 518 (851)
Q Consensus 461 ~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~l~l~~N~l~~~ 518 (851)
+|++|++++.. +..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|++...
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 99999998542 2789999999999999999996555 4899999999999999998744
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=3.3e-16 Score=153.09 Aligned_cols=129 Identities=29% Similarity=0.368 Sum_probs=113.8
Q ss_pred CEEEccCcccCCCCCccccCCccccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCc
Q 046438 363 SSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNN 442 (851)
Q Consensus 363 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 442 (851)
+.+++++|++. .+|..+. ++|++|++++|+|+.+|..+.++++|+.|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 56788888877 4454443 57999999999999999999999999999999999998888889999999999999999
Q ss_pred ccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCccccc
Q 046438 443 LSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGI 494 (851)
Q Consensus 443 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 494 (851)
|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+...
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 9988888999999999999999999976677899999999999999999753
No 384
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.64 E-value=2.8e-15 Score=163.77 Aligned_cols=264 Identities=16% Similarity=0.175 Sum_probs=124.7
Q ss_pred CCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCcccccc--cCCCCCCCcEEeCCCCCCCCCCCcchhcCCccccccc
Q 046438 17 SSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSF--PFFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLS 94 (851)
Q Consensus 17 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~--~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 94 (851)
..++...+..+ ++.+...+|.+. +|+.+++..+ ++.+. .|.++ +|+.+++.. .++ .++...|.++++|+.++
T Consensus 113 ~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 113 KGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLE-QLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCC-EECSSTTTTCTTCCEEE
T ss_pred CCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-Ccc-EehHHHhhCcccCCeee
Confidence 33444444332 333344444442 4555555443 33211 13332 355555543 333 44444455555555555
Q ss_pred ccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeecccccc
Q 046438 95 LAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNTLSG 174 (851)
Q Consensus 95 L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 174 (851)
|++|.++.+...+|. +++|+.+.|..+ ++.....+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+. +.++
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~- 260 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVT- 260 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCC-
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCcc-
Confidence 555555444444444 345555555432 33334444555555555555432 33344444444 445555552 2233
Q ss_pred ccchhHhhhccccccccccccccc-----ccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccccCCC
Q 046438 175 SISSSIRLALPNLELFSLANNNFS-----GKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYITSSN 249 (851)
Q Consensus 175 ~~~~~~~~~l~~L~~L~L~~N~i~-----~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 249 (851)
.+....|..+++|+.+++.+|.+. ...+..|.++++|+.+.|. +.++.+...+|.++++|+.++|..| ++.++
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~ 338 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQIN 338 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEEC
T ss_pred EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEc
Confidence 344444445555555555544433 3444555556666666665 3355555666666666666666443 44333
Q ss_pred CcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccc
Q 046438 250 HELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIR 301 (851)
Q Consensus 250 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~ 301 (851)
. .+|.++ +|+.+++++|.+... .+..+...+..+..+++..+.+.
T Consensus 339 ~-----~aF~~~-~L~~l~l~~n~~~~l-~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 339 F-----SAFNNT-GIKEVKVEGTTPPQV-FEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp T-----TSSSSS-CCCEEEECCSSCCBC-CCSSCCCSCTTCCEEEECGGGHH
T ss_pred H-----HhCCCC-CCCEEEEcCCCCccc-ccccccCCCCCccEEEeCHHHHH
Confidence 2 235555 666666666655321 12233334345667777666544
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=9.6e-17 Score=150.17 Aligned_cols=126 Identities=20% Similarity=0.250 Sum_probs=72.1
Q ss_pred ccccceecccCcCc--cCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEE
Q 046438 384 ASLRKLSFASNELT--FVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLS 461 (851)
Q Consensus 384 ~~L~~L~L~~N~l~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 461 (851)
++|++|++++|+++ .+|..+..+++|+.|++++|.+++. ..++.+++|++|++++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 34444455555444 4444444555555555555555533 4455555555555555555544555555566666666
Q ss_pred ccCcccCCC-CcccccCCCCCCEEECCCCcccccCC---ccccccccccceecc
Q 046438 462 LGDNNLQGS-IPNSIGDLISLECLDLSNNILSGIIP---SSLEKLLYLKYLNVS 511 (851)
Q Consensus 462 L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~l~l~ 511 (851)
+++|++++. .+..++.+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666642 23566666667777777776665444 356666777766665
No 386
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.63 E-value=1.2e-16 Score=169.80 Aligned_cols=137 Identities=14% Similarity=0.170 Sum_probs=100.5
Q ss_pred cCCCccceeccccceEEEEEEEcCCcEEEEEEEeecch--------------hhHH--------HHHHHHHHHhhcCCCc
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLE--------------GALE--------SFNAECEVLRSIRHRN 683 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~--------~~~~e~~~l~~l~h~n 683 (851)
.-|++.+.||+|++|.||+|.+.+|+.||||+++.... .... ...+|...+.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34999999999999999999998999999999763210 0011 1235666666665444
Q ss_pred cc--ceeeeeecCCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECC
Q 046438 684 LV--RIISSCTNDDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDE 761 (851)
Q Consensus 684 iv--~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~ 761 (851)
+. ..++. ...++||||++|+++..+... .....++.|++.++.|| |++|||||||||.|||+++
T Consensus 175 v~vp~p~~~----~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~l---H~~gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 175 FPVPEPIAQ----SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRL---AKHGLIHGDFNEFNILIRE 240 (397)
T ss_dssp CSCCCEEEE----ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEEEE
T ss_pred CCCCeeeec----cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHEEEeC
Confidence 32 22221 123799999999888654321 23456889999999999 7889999999999999987
Q ss_pred CC----------cEEEeeccCcccc
Q 046438 762 DM----------VARLGDFGIAKLL 776 (851)
Q Consensus 762 ~~----------~~kl~Dfg~a~~~ 776 (851)
++ .+.|+||+-+...
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCcccccccccceEEEEeCCcccC
Confidence 76 3899999977654
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=3.4e-16 Score=146.45 Aligned_cols=128 Identities=23% Similarity=0.225 Sum_probs=90.2
Q ss_pred CCCCCEEeCcCCCCc-cCCCccccCCCCCCEEEcCCCcccccccCCCCCCCcEEeCCCCCCCCCCCcchhcCCccccccc
Q 046438 16 LSSLQYLDLSFNQLL-GTIPSSIFSINTLEILDLSNNQLSGSFPFFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLS 94 (851)
Q Consensus 16 l~~L~~L~ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 94 (851)
.++|++|++++|+++ +.+|..+..+++|++|+|++|++++...+..+++|++|++++|.+++.+| ..+..+++|++|+
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~ 94 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSDNRVSGGLE-VLAEKCPNLTHLN 94 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCCTTCCCCTTCCEEECCSSCCCSCTH-HHHHHCTTCCEEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCchhhhcCCCCCEEECCCCcccchHH-HHhhhCCCCCEEE
Confidence 467889999999887 67888888888888888888888876556777788888888888774333 3455567777777
Q ss_pred ccccccccC-CCccccCCCCccEEeccccccccccc---hhhcCcccccEEEcc
Q 046438 95 LAFNQFAGH-LPREIGNLTSLTSIDLSENHLMGEIP---HEIGNLRNLQALGLL 144 (851)
Q Consensus 95 L~~N~i~~~-~~~~l~~l~~L~~L~Ls~n~l~~~~~---~~~~~l~~L~~L~L~ 144 (851)
+++|.+++. .+..++.+++|++|++++|.+++..+ ..+..+++|++|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 777776643 23566666667777777776664443 356666666666654
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.63 E-value=5.3e-15 Score=161.53 Aligned_cols=273 Identities=13% Similarity=0.109 Sum_probs=163.1
Q ss_pred CCcccccccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEE
Q 046438 86 YLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKIL 165 (851)
Q Consensus 86 ~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 165 (851)
.+..++.+.+.++ ++.+...+|.++ +|+.+++..+ ++.....+|.++ +|+.+.+.. .+..+.+.+|.+|++|+.+
T Consensus 111 ~~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 111 ILKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKA 185 (401)
T ss_dssp ECSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEE
T ss_pred ecCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCee
Confidence 3444444444432 333444455554 4555555554 443444455553 456655543 4544555555666666666
Q ss_pred EeeccccccccchhHhhhcccccccccccccccccCCccccccCCCcEEecCCCCCccccCccccCCCCcceEeccCccc
Q 046438 166 QLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFIFNASKLSICELPDNSFSGFIPNRFHNMRNLKELNLEYNYI 245 (851)
Q Consensus 166 ~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i 245 (851)
++++|.++ .++...|. ..+|+.+.|..+ ++.....+|.++++|+.+++.+| ++.+...+|.+ .+|+.+.+. +.+
T Consensus 186 ~l~~n~l~-~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i 259 (401)
T 4fdw_A 186 DLSKTKIT-KLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGV 259 (401)
T ss_dssp ECTTSCCS-EECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTC
T ss_pred ecCCCcce-EechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCc
Confidence 66655555 44444443 355666666533 55455556666666666666653 55566666666 567777773 334
Q ss_pred cCCCCcchhhhhccccccccEEeccCCCccCCCCCCccccccccccEEEeecCccccCCCcccccccCCcEEEecCCCCC
Q 046438 246 TSSNHELSFISSLANSKKLKVLSLTGNPLLDCVLPSSIGNLSLSMERFYLHNCNIRGSIPKEMGNLINLIIIRLGYNKLN 325 (851)
Q Consensus 246 ~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~ 325 (851)
+.++. .++..+++|+.+++.+|.+. .+.+..+.+.+|.++++|+.+++. +.+.
T Consensus 260 ~~I~~-----~aF~~c~~L~~l~l~~~~~~---------------------~~~~~~I~~~aF~~c~~L~~l~l~-~~i~ 312 (401)
T 4fdw_A 260 TNIAS-----RAFYYCPELAEVTTYGSTFN---------------------DDPEAMIHPYCLEGCPKLARFEIP-ESIR 312 (401)
T ss_dssp CEECT-----TTTTTCTTCCEEEEESSCCC---------------------CCTTCEECTTTTTTCTTCCEECCC-TTCC
T ss_pred cEECh-----hHhhCCCCCCEEEeCCcccc---------------------CCcccEECHHHhhCCccCCeEEeC-CceE
Confidence 44432 24666777777777666542 111122335567777778887777 4466
Q ss_pred CCcCccccCCCCCcEEEcccccccccccccccccCCCCEEEccCcccCCCCCccccCCc-cccceecccCcCcc
Q 046438 326 GSIPSTLSRLEKLQILGLENNQLEGRILDDICRLARLSSVYLDHNKLSGSIPACFGNLA-SLRKLSFASNELTF 398 (851)
Q Consensus 326 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~ 398 (851)
.....+|.++++|+.+.|..| ++.+...+|..+ +|+.+++++|.+....+..|.+++ +++.|.+..+.+..
T Consensus 313 ~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~~ 384 (401)
T 4fdw_A 313 ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVEK 384 (401)
T ss_dssp EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHHH
T ss_pred EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHHH
Confidence 566677888888888888544 665667777777 888888888877766677777774 67788887776653
No 389
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.62 E-value=3.3e-15 Score=164.11 Aligned_cols=80 Identities=18% Similarity=0.171 Sum_probs=39.3
Q ss_pred ccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccc
Q 046438 424 PLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLL 503 (851)
Q Consensus 424 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 503 (851)
..+|.++++|+.+++..+ ++......|.++.+|+.+++..| ++.....+|.++++|+.+++..+ ++ .+...|..++
T Consensus 313 ~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~ 388 (394)
T 4fs7_A 313 EEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTT 388 (394)
T ss_dssp TTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTC
T ss_pred hhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCC
Confidence 334444444554444322 33333445555555555555544 44344455556666666655443 22 2334455555
Q ss_pred cccc
Q 046438 504 YLKY 507 (851)
Q Consensus 504 ~L~~ 507 (851)
+|+.
T Consensus 389 ~L~~ 392 (394)
T 4fs7_A 389 KFKW 392 (394)
T ss_dssp EEEE
T ss_pred CCcE
Confidence 5554
No 390
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.62 E-value=1.2e-14 Score=159.57 Aligned_cols=155 Identities=14% Similarity=0.094 Sum_probs=66.3
Q ss_pred CCCccccCCCCCCEEEcCCCcccc--cccCCCCCCCcEEeCCCCCCCCCCCcchhcCCcccccccccccccccCCCcccc
Q 046438 32 TIPSSIFSINTLEILDLSNNQLSG--SFPFFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGHLPREIG 109 (851)
Q Consensus 32 ~~~~~~~~l~~L~~L~Ls~n~l~~--~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~ 109 (851)
+-..+|.++.+|+.+.|..+ ++. ...|.+|++|+.+++..+ ++ .++...|.+++.|+.+.+..+ +..+...+|.
T Consensus 62 Ig~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~ 137 (394)
T 4fs7_A 62 IGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VK-MIGRCTFSGCYALKSILLPLM-LKSIGVEAFK 137 (394)
T ss_dssp ECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCCCCCCTT-CCEECTTTTT
T ss_pred hHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ce-EccchhhcccccchhhcccCc-eeeecceeee
Confidence 33444555555555555432 332 223455555555555433 33 444445555555555544433 2223334444
Q ss_pred CCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeeccccccccchhHhhhcccccc
Q 046438 110 NLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNTLSGSISSSIRLALPNLEL 189 (851)
Q Consensus 110 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~ 189 (851)
++..++......... ....+|.++++|+.+.+.++ +..+....|.++.+|+.+++..+ ++ .+....|...+.|+.
T Consensus 138 ~~~~~~~~~~~~~~~--i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~-~I~~~~F~~~~~L~~ 212 (394)
T 4fs7_A 138 GCDFKEITIPEGVTV--IGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LK-IIRDYCFAECILLEN 212 (394)
T ss_dssp TCCCSEEECCTTCCE--ECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CC-EECTTTTTTCTTCCB
T ss_pred cccccccccCccccc--cchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ce-EeCchhhccccccce
Confidence 443333222222211 22334555555555555332 22233444445555555554433 22 333344444444444
Q ss_pred cccccc
Q 046438 190 FSLANN 195 (851)
Q Consensus 190 L~L~~N 195 (851)
+.+..+
T Consensus 213 i~~~~~ 218 (394)
T 4fs7_A 213 MEFPNS 218 (394)
T ss_dssp CCCCTT
T ss_pred eecCCC
Confidence 444433
No 391
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=2.9e-15 Score=144.52 Aligned_cols=131 Identities=27% Similarity=0.282 Sum_probs=93.6
Q ss_pred CEEEcCCCcccccccCCCCCCCcEEeCCCCCCCCCCCcchhcCCcccccccccccccccCCCccccCCCCccEEeccccc
Q 046438 44 EILDLSNNQLSGSFPFFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENH 123 (851)
Q Consensus 44 ~~L~Ls~n~l~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~ 123 (851)
+.+++++|+++. +|....++|++|++++|+++ .++...|..+++|++|+|++|.+++..+..|..+++|++|+|++|.
T Consensus 10 ~~l~~~~~~l~~-~p~~~~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp TEEECCSSCCSS-CCTTCCTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEecCCCCcc-CCCCCCCCCcEEEeCCCccc-EeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 455556665553 23333456677777777766 5666667777777777777777776666667778888888888888
Q ss_pred cccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEeecccccccc
Q 046438 124 LMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLTNNTLSGSI 176 (851)
Q Consensus 124 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 176 (851)
+++..+..|..+++|++|++++|++++..+..+..+++|+.|++++|.+.+..
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 88666667778888888888888888766666777888888888888877544
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=9e-16 Score=147.93 Aligned_cols=110 Identities=20% Similarity=0.224 Sum_probs=68.8
Q ss_pred CCCCCCCCEEeCcCCCCccCCCccccCCCCCCEEEcCCCcccccccCCCCCCCcEEeCCCCCCCCCCCcchhcCCccccc
Q 046438 13 LGSLSSLQYLDLSFNQLLGTIPSSIFSINTLEILDLSNNQLSGSFPFFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQF 92 (851)
Q Consensus 13 l~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 92 (851)
+..+.+|++|++++|+++. +|......++|++|+|++|++++...+..+++|++|++++|+++ .+|+.+|..+++|++
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTE 92 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEECCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCE
T ss_pred cCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcccccccCCCCCEEECCCCccc-ccCcchhhcCCCCCE
Confidence 5567778888888888874 45433333477778877777776655666777777777777776 555555555666666
Q ss_pred ccccccccccCCCc--cccCCCCccEEeccccccc
Q 046438 93 LSLAFNQFAGHLPR--EIGNLTSLTSIDLSENHLM 125 (851)
Q Consensus 93 L~L~~N~i~~~~~~--~l~~l~~L~~L~Ls~n~l~ 125 (851)
|+|++|+|+ .+|. .+..+++|++|++++|.++
T Consensus 93 L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 93 LILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp EECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred EECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 666666554 2333 4555555555555555554
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.60 E-value=8.8e-18 Score=165.54 Aligned_cols=153 Identities=21% Similarity=0.280 Sum_probs=98.2
Q ss_pred cCCCCEEEccCcccCCCCCc------cccCCccccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchh
Q 046438 359 LARLSSVYLDHNKLSGSIPA------CFGNLASLRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKV 432 (851)
Q Consensus 359 l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 432 (851)
...++.++++.+.+.+..|. .+..+++|++|++++|+++.+| .+..+++|+.|++++|+++ .+|..+..+++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 34444444444444444443 5666666666666666666666 6666666777777777666 45556666667
Q ss_pred hhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCc-ccccCCCCCCEEECCCCcccccCCcc----------ccc
Q 046438 433 LVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIP-NSIGDLISLECLDLSNNILSGIIPSS----------LEK 501 (851)
Q Consensus 433 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~----------l~~ 501 (851)
|++|++++|++++ +| .+..+++|+.|++++|++++..+ ..+..+++|++|++++|++++.+|.. +..
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~ 172 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKR 172 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHh
Confidence 7777777777764 34 46667777777777777763222 36777777888888888777665543 677
Q ss_pred cccccceeccCccccc
Q 046438 502 LLYLKYLNVSFNRLEG 517 (851)
Q Consensus 502 l~~L~~l~l~~N~l~~ 517 (851)
+++|+.|+ +|+++.
T Consensus 173 l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 173 LPNLKKLD--GMPVDV 186 (198)
T ss_dssp CSSCSEEC--CGGGTT
T ss_pred CCCcEEEC--CcccCH
Confidence 78888775 676653
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=5.5e-16 Score=149.46 Aligned_cols=134 Identities=18% Similarity=0.185 Sum_probs=103.1
Q ss_pred cccCCccccceecccCcCccCchhhcccC-cceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCc
Q 046438 379 CFGNLASLRKLSFASNELTFVPSTFWNLT-NILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNL 457 (851)
Q Consensus 379 ~~~~l~~L~~L~L~~N~l~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 457 (851)
.+..+++|++|++++|+++.+|. +..+. +|+.|++++|.+++. ..|+.+++|++|++++|+|++..+..|..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCchhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 34556677777777777777754 44444 788888888888754 577788888888888888885544556888889
Q ss_pred cEEEccCcccCCCCcc--cccCCCCCCEEECCCCcccccCCcc----ccccccccceeccCccccc
Q 046438 458 QNLSLGDNNLQGSIPN--SIGDLISLECLDLSNNILSGIIPSS----LEKLLYLKYLNVSFNRLEG 517 (851)
Q Consensus 458 ~~L~L~~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~----l~~l~~L~~l~l~~N~l~~ 517 (851)
++|+|++|+|+ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.|++++|+...
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 99999999986 5665 7888899999999999998 45664 8889999999999988764
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=3.5e-15 Score=142.58 Aligned_cols=110 Identities=25% Similarity=0.273 Sum_probs=81.2
Q ss_pred eEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCC
Q 046438 410 LMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNN 489 (851)
Q Consensus 410 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 489 (851)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 45555555555 3444432 56677777777777666777788888888888888888666667788888888888888
Q ss_pred cccccCCccccccccccceeccCccccccCCCC
Q 046438 490 ILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRG 522 (851)
Q Consensus 490 ~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~ 522 (851)
+|++..+..|..+++|+.|+|++|+|+|.++..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l 121 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDI 121 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhH
Confidence 888766667888888888888888888888743
No 396
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=2.9e-17 Score=161.78 Aligned_cols=133 Identities=22% Similarity=0.252 Sum_probs=92.1
Q ss_pred cccccCCCCEEEccCcccCCCCCccccCCccccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhh
Q 046438 355 DICRLARLSSVYLDHNKLSGSIPACFGNLASLRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLV 434 (851)
Q Consensus 355 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 434 (851)
.+..+++|+.|++++|++.+ +| .+..+++|+.|++++|+++.+|..+..+++|+.|++++|++++ +| .+..+++|+
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~ 118 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLR 118 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCC
Confidence 55666666666666666664 44 6666677777777777777777666666777777777777774 44 566777777
Q ss_pred hhhccCCcccccCC-cccCCCCCccEEEccCcccCCCCcc----------cccCCCCCCEEECCCCcccc
Q 046438 435 ELYLSRNNLSGDIP-TTIGGLKNLQNLSLGDNNLQGSIPN----------SIGDLISLECLDLSNNILSG 493 (851)
Q Consensus 435 ~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~----------~~~~l~~L~~L~Ls~N~l~~ 493 (851)
+|++++|++++..+ ..+..+++|++|++++|++.+.+|. .+..+++|+.|| +|.++.
T Consensus 119 ~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 119 VLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp EEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred EEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 77777777774322 4677788888888888888765554 277788888887 777763
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.54 E-value=1e-14 Score=139.73 Aligned_cols=109 Identities=26% Similarity=0.300 Sum_probs=71.1
Q ss_pred eEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECCCC
Q 046438 410 LMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLSNN 489 (851)
Q Consensus 410 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 489 (851)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 34455555554 3444332 45566666666666555666777777777777777777555555677777777777777
Q ss_pred cccccCCccccccccccceeccCccccccCCC
Q 046438 490 ILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPR 521 (851)
Q Consensus 490 ~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~ 521 (851)
+|++..+..|..+++|+.|+|++|+|.|.++.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~ 123 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECRD 123 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBGG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccccc
Confidence 77765555577777777777777777777653
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=4e-14 Score=135.23 Aligned_cols=109 Identities=26% Similarity=0.227 Sum_probs=96.2
Q ss_pred cccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccC
Q 046438 385 SLRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGD 464 (851)
Q Consensus 385 ~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 464 (851)
+.+.+++++|+++.+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 10 ~~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 10 SGTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp ETTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 35678888888888887663 7899999999999988888999999999999999999977777889999999999999
Q ss_pred cccCCCCcccccCCCCCCEEECCCCcccccC
Q 046438 465 NNLQGSIPNSIGDLISLECLDLSNNILSGII 495 (851)
Q Consensus 465 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 495 (851)
|+|++..+..|..+++|++|+|++|.++...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 9999777778999999999999999998543
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=4.3e-14 Score=135.43 Aligned_cols=107 Identities=24% Similarity=0.241 Sum_probs=93.8
Q ss_pred ccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCc
Q 046438 386 LRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDN 465 (851)
Q Consensus 386 L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 465 (851)
-+.+++++|+++.+|..+. ++|+.|+|++|++++..|..|+++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 14 ~~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SSEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CcEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 3678888888888887664 78999999999999888889999999999999999999766667899999999999999
Q ss_pred ccCCCCcccccCCCCCCEEECCCCccccc
Q 046438 466 NLQGSIPNSIGDLISLECLDLSNNILSGI 494 (851)
Q Consensus 466 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 494 (851)
+|++..+..|..+++|+.|+|++|++...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 99976666799999999999999999843
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.40 E-value=3.5e-12 Score=139.96 Aligned_cols=32 Identities=16% Similarity=0.242 Sum_probs=13.6
Q ss_pred CCcEEecCCCCCccccCccccCCCCcceEeccC
Q 046438 210 KLSICELPDNSFSGFIPNRFHNMRNLKELNLEY 242 (851)
Q Consensus 210 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 242 (851)
+|+.+.+..+ +..+...+|.++.+++......
T Consensus 183 ~l~~i~ip~~-~~~i~~~af~~c~~l~~~~~~~ 214 (394)
T 4gt6_A 183 ALTQIHIPAK-VTRIGTNAFSECFALSTITSDS 214 (394)
T ss_dssp CCSEEEECTT-CCEECTTTTTTCTTCCEEEECC
T ss_pred ceeEEEECCc-ccccccchhhhccccceecccc
Confidence 3444444432 2223344455555554444433
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.40 E-value=1.6e-13 Score=148.10 Aligned_cols=103 Identities=20% Similarity=0.152 Sum_probs=60.6
Q ss_pred ceecccC-cCccCchhhcccCcceEEEecC-CCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCCccEEEccCc
Q 046438 388 KLSFASN-ELTFVPSTFWNLTNILMVDLSS-NPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKNLQNLSLGDN 465 (851)
Q Consensus 388 ~L~L~~N-~l~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 465 (851)
.++++++ +|+.+|. +..+++|+.|+|++ |+|++..+..|+++++|+.|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 12 ~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 12 GLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp CEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 4566666 6666666 66666666666664 6666555555666666666666666665555555555666666666666
Q ss_pred ccCCCCcccccCCCCCCEEECCCCccc
Q 046438 466 NLQGSIPNSIGDLISLECLDLSNNILS 492 (851)
Q Consensus 466 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 492 (851)
+|++..+..|..++ |+.|+|++|.+.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 66544444444443 555555555555
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.39 E-value=1.8e-14 Score=155.72 Aligned_cols=159 Identities=19% Similarity=0.232 Sum_probs=89.4
Q ss_pred CCCCEEEcCCCccccccc------C-CCCCCCcEEeCCCCCCCCCCCcchhcCCcccccccccccccccCCCccc-----
Q 046438 41 NTLEILDLSNNQLSGSFP------F-FNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQFAGHLPREI----- 108 (851)
Q Consensus 41 ~~L~~L~Ls~n~l~~~~~------~-~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l----- 108 (851)
+.|+.|+|++|.+++... + ...++|++|||++|.+++.....++..+++|++|+|++|.|++.....+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 567777777777764221 1 2346777777777777633333344456667777777777664333333
Q ss_pred cCCCCccEEeccccccccc----cchhhcCcccccEEEccCccccCCC----CccccCCCcCcEEEeeccccccccchhH
Q 046438 109 GNLTSLTSIDLSENHLMGE----IPHEIGNLRNLQALGLLSNNLVGVV----PATLFNISTLKILQLTNNTLSGSISSSI 180 (851)
Q Consensus 109 ~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~----~~~l~~l~~L~~L~L~~n~l~~~~~~~~ 180 (851)
...++|++|+|++|.++.. ++..+..+++|++|+|++|++.+.. +..+...++|+.|+|++|.|++.....+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 2356677777777776532 3444456666777777777665432 3344555666666666666654332222
Q ss_pred hh---hcccccccccccccccc
Q 046438 181 RL---ALPNLELFSLANNNFSG 199 (851)
Q Consensus 181 ~~---~l~~L~~L~L~~N~i~~ 199 (851)
.. ..++|++|+|++|.|++
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHhCCCCCEEeccCCCCCH
Confidence 22 22445555555554443
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.39 E-value=4e-13 Score=144.95 Aligned_cols=131 Identities=22% Similarity=0.196 Sum_probs=103.6
Q ss_pred eEEEecCC-CCCCCCccccccchhhhhhhccC-CcccccCCcccCCCCCccEEEccCcccCCCCcccccCCCCCCEEECC
Q 046438 410 LMVDLSSN-PLSGSLPLEIGNLKVLVELYLSR-NNLSGDIPTTIGGLKNLQNLSLGDNNLQGSIPNSIGDLISLECLDLS 487 (851)
Q Consensus 410 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 487 (851)
..++++++ .++ .+|. +..+++|++|+|++ |+|++..+..|+++++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35688888 888 5777 98999999999996 99997777889999999999999999998888899999999999999
Q ss_pred CCcccccCCccccccccccceeccCccccccCCCCCc--ccccCcccccCCcCccCCC
Q 046438 488 NNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGT--LANFTSESFMGNDLLCGSP 543 (851)
Q Consensus 488 ~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~--~~~l~~~~~~~n~~~c~~~ 543 (851)
+|+|++..+..+..++ |+.|+|++|+|.|+|+.... +.......+..+...|..|
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~ 145 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQ 145 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSS
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCC
Confidence 9999976666676666 99999999999998864322 1112223344566777766
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.38 E-value=7.9e-12 Score=137.10 Aligned_cols=133 Identities=11% Similarity=0.162 Sum_probs=77.0
Q ss_pred CccccCCccccceecccCcCccCchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCCC
Q 046438 377 PACFGNLASLRKLSFASNELTFVPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLKN 456 (851)
Q Consensus 377 ~~~~~~l~~L~~L~L~~N~l~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 456 (851)
..+|.++.+|+.+.+.++..+.-..+|.++++|+.+.+. +.++.....+|.++.+|+++++..+ ++.+....|.++.+
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred cceeeecccccEEecccccceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 445666666666666544333223456666666666665 3344345556777777777777654 55455667777788
Q ss_pred ccEEEccCcccCCCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccc
Q 046438 457 LQNLSLGDNNLQGSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRL 515 (851)
Q Consensus 457 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l 515 (851)
|+.+.+..+ ++.....+|.++++|+.+++.+|.... ..+.....|+.+.+..|.+
T Consensus 336 L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 336 LERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred CCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 888877644 554556777788888888887775441 3455666777777665543
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.34 E-value=1.3e-14 Score=156.83 Aligned_cols=186 Identities=17% Similarity=0.109 Sum_probs=92.6
Q ss_pred cCCcEEEecCCCCCCCcCccccC-----CCCCcEEEccccccccccccccc-ccCCCCEEEccCcccCCCCCccc-----
Q 046438 312 INLIIIRLGYNKLNGSIPSTLSR-----LEKLQILGLENNQLEGRILDDIC-RLARLSSVYLDHNKLSGSIPACF----- 380 (851)
Q Consensus 312 ~~L~~L~L~~n~l~~~~~~~~~~-----l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~----- 380 (851)
+.|+.|++++|.++......+.. .++|++|+|++|.++......+. .+++|+.|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 44555555555554332222221 14566666666666543333322 24455555555555543222222
Q ss_pred cCCccccceecccCcCcc-----CchhhcccCcceEEEecCCCCCCCCccccccchhhhhhhccCCcccccCCcccCCCC
Q 046438 381 GNLASLRKLSFASNELTF-----VPSTFWNLTNILMVDLSSNPLSGSLPLEIGNLKVLVELYLSRNNLSGDIPTTIGGLK 455 (851)
Q Consensus 381 ~~l~~L~~L~L~~N~l~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 455 (851)
...++|++|+|++|.|+. ++..+...++|++|+|++|.+++.... .++..+...+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~--------------------~L~~~L~~~~ 211 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE--------------------LLAAQLDRNR 211 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH--------------------HHHHHGGGCS
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH--------------------HHHHHHhcCC
Confidence 123445555555555542 233334444555555555544321100 1234455566
Q ss_pred CccEEEccCcccCCC----CcccccCCCCCCEEECCCCcccccCCcccccccc-----cccee--ccCccccc
Q 046438 456 NLQNLSLGDNNLQGS----IPNSIGDLISLECLDLSNNILSGIIPSSLEKLLY-----LKYLN--VSFNRLEG 517 (851)
Q Consensus 456 ~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-----L~~l~--l~~N~l~~ 517 (851)
+|+.|+|++|.|+.. ++..+...++|++|||++|.|+......+..+.. |+.+. +.+|.++.
T Consensus 212 ~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~~ 284 (372)
T 3un9_A 212 QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVSE 284 (372)
T ss_dssp CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CHH
T ss_pred CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccCH
Confidence 788888888887643 3344455678888888888887655444444321 55565 66666543
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.25 E-value=1.4e-11 Score=127.10 Aligned_cols=146 Identities=13% Similarity=0.112 Sum_probs=114.9
Q ss_pred HHhcCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcC-CCcccceeeeeecCCeeEEEE
Q 046438 623 QATDQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIR-HRNLVRIISSCTNDDFKALVL 701 (851)
Q Consensus 623 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 701 (851)
...+.|++....+.|+.+.||++.. +++.+++|+...........+.+|+++++.+. +..+.++++++.+.+..++||
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 3446788888899999999999975 47899999987533233356889999999985 677888999998888999999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhc---------------------------------------
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFG--------------------------------------- 742 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~--------------------------------------- 742 (851)
||++|.++.+... +......++.+++++++.||..
T Consensus 90 e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 90 SEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp ECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred EecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 9999999876531 1123346888999999999761
Q ss_pred -----------------CCCCcEecCCCCCCEEECCCCcEEEeeccCccc
Q 046438 743 -----------------HPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKL 775 (851)
Q Consensus 743 -----------------h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~ 775 (851)
+...++|||+++.||+++++..+.|+||+.+..
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 115699999999999998766677999998754
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.10 E-value=1.3e-10 Score=119.79 Aligned_cols=138 Identities=19% Similarity=0.109 Sum_probs=100.7
Q ss_pred cCCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCc--ccceeeeeecCCeeEEEEec
Q 046438 626 DQFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRN--LVRIISSCTNDDFKALVLDY 703 (851)
Q Consensus 626 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~ 703 (851)
..|.+....+.|..+.||++...+|..+++|+.... ....+.+|+++++.+++.+ +.+++++..+.+..++||||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 345543333456679999998767888999997643 2245788999999986544 45688888877788999999
Q ss_pred cCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 046438 704 MPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGH---------------------------------------- 743 (851)
Q Consensus 704 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h---------------------------------------- 743 (851)
++|.++. . .. .+ ...++.+++++++.||...
T Consensus 97 i~G~~l~--~-~~---~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T 1nd4_A 97 VPGQDLL--S-SH---LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP 167 (264)
T ss_dssp CSSEETT--T-SC---CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred cCCcccC--c-Cc---CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence 9998884 2 11 11 2356778888888885321
Q ss_pred ---------------CCCcEecCCCCCCEEECCCCcEEEeeccCccc
Q 046438 744 ---------------PNPVVHCDIKPSNVLLDEDMVARLGDFGIAKL 775 (851)
Q Consensus 744 ---------------~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~ 775 (851)
..+++|||++|.||+++.++.+.|+|||.+..
T Consensus 168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998776677999998764
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.06 E-value=3.3e-09 Score=115.53 Aligned_cols=59 Identities=5% Similarity=0.064 Sum_probs=35.3
Q ss_pred cccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcCcEEEee
Q 046438 107 EIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTLKILQLT 168 (851)
Q Consensus 107 ~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 168 (851)
++....+|+.+.+... ++..-..+|.++.+|+.+.+.. .++.+...+|.++ +|+.+.+.
T Consensus 41 ~~~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~ 99 (379)
T 4h09_A 41 WYKDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAS-TVTSIGDGAFADT-KLQSYTGM 99 (379)
T ss_dssp TGGGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECT-TCCEECTTTTTTC-CCCEEEEC
T ss_pred ccccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCC-cceEechhhhcCC-CCceEECC
Confidence 3445566777776543 4445556677777777777743 3555555666665 46665554
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.02 E-value=9.2e-09 Score=112.02 Aligned_cols=83 Identities=5% Similarity=0.009 Sum_probs=58.9
Q ss_pred hhcCCcccccccccccccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCccccCCCCccccCCCcC
Q 046438 83 IFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSNNLVGVVPATLFNISTL 162 (851)
Q Consensus 83 ~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 162 (851)
.|....+|+.+.+..+ ++.+...+|.+|++|+.++|..+ ++..-..+|.++ +|+.+.+.. ++..+...+|..+ +|
T Consensus 41 ~~~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~-~l~~I~~~aF~~~-~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGME-RVKKFGDYVFQGT-DL 115 (379)
T ss_dssp TGGGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECT-TCCEECTTTTTTC-CC
T ss_pred ccccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCc-eeeEeccceeccC-Cc
Confidence 3666778888888753 66566778999999999999765 665666788887 688777753 4554555566554 68
Q ss_pred cEEEeecc
Q 046438 163 KILQLTNN 170 (851)
Q Consensus 163 ~~L~L~~n 170 (851)
+.+.+..+
T Consensus 116 ~~i~lp~~ 123 (379)
T 4h09_A 116 DDFEFPGA 123 (379)
T ss_dssp SEEECCTT
T ss_pred ccccCCCc
Confidence 88877654
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.98 E-value=1.2e-10 Score=124.65 Aligned_cols=83 Identities=17% Similarity=0.213 Sum_probs=52.6
Q ss_pred chhhhhhhccCCcccccCCccc---CCCCCccEEEccCcccCCC----CcccccCCCCCCEEECCCCcccccCCccccc-
Q 046438 430 LKVLVELYLSRNNLSGDIPTTI---GGLKNLQNLSLGDNNLQGS----IPNSIGDLISLECLDLSNNILSGIIPSSLEK- 501 (851)
Q Consensus 430 l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~- 501 (851)
+++|+.|+|++|.+++..+..+ ..+++|++|+|+.|.|.+. ++..+..+++|+.|+|++|.++...-..+..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 5666666666666653322222 2467888888888888753 2333455788899999888887543333333
Q ss_pred cccccceeccCcc
Q 046438 502 LLYLKYLNVSFNR 514 (851)
Q Consensus 502 l~~L~~l~l~~N~ 514 (851)
+ ...+++++|+
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 2 2457888887
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.92 E-value=1.9e-09 Score=116.51 Aligned_cols=143 Identities=10% Similarity=0.150 Sum_probs=106.7
Q ss_pred ccceeccccceEEEEEEEcCCcEEEEEEEe--ecc-hhhHHHHHHHHHHHhhcCC--CcccceeeeeecC---CeeEEEE
Q 046438 630 VNNLIGSGSFGSVYRGRFLDGMEVAIKVFH--LQL-EGALESFNAECEVLRSIRH--RNLVRIISSCTND---DFKALVL 701 (851)
Q Consensus 630 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~---~~~~lv~ 701 (851)
.++.++.|.++.||+++.. +..+++|+.. ... ......+.+|+++++.+.. ..+++++.++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4578899999999999864 5678898875 321 1223568889999999974 5578888888766 4588999
Q ss_pred eccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 046438 702 DYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGH-------------------------------------- 743 (851)
Q Consensus 702 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h-------------------------------------- 743 (851)
||++|..+.+.. ...++......++.+++++++.||...
T Consensus 121 e~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 999998774321 233567778889999999999998521
Q ss_pred -----------------CCCcEecCCCCCCEEECCCCc--EEEeeccCcccc
Q 046438 744 -----------------PNPVVHCDIKPSNVLLDEDMV--ARLGDFGIAKLL 776 (851)
Q Consensus 744 -----------------~~~ivH~Dl~~~Nill~~~~~--~kl~Dfg~a~~~ 776 (851)
...++|||+++.||+++.++. +.|+||+.+...
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 357999999999999987753 689999998753
No 412
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.92 E-value=8.6e-10 Score=116.16 Aligned_cols=187 Identities=16% Similarity=0.138 Sum_probs=121.6
Q ss_pred cceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcC-CCc--ccceeeeeecCC---eeEEEEecc
Q 046438 631 NNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIR-HRN--LVRIISSCTNDD---FKALVLDYM 704 (851)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e~~ 704 (851)
++.++.|....||++. ..+++|+.... .....+.+|+++++.+. +.. +.+++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4678999999999863 56899986533 33467899999998884 333 344555443333 457899999
Q ss_pred CCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhc------------------------------------------
Q 046438 705 PKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFG------------------------------------------ 742 (851)
Q Consensus 705 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~------------------------------------------ 742 (851)
+|.++..... ..++..++..++.++++.++.||..
T Consensus 99 ~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 9988865332 2355666677788888888888641
Q ss_pred -------------CCCCcEecCCCCCCEEECC--CCcEEEeeccCccccCCCCCccccccc---cCc--------cc--c
Q 046438 743 -------------HPNPVVHCDIKPSNVLLDE--DMVARLGDFGIAKLLSGDESMKHTQTL---ATI--------GY--M 794 (851)
Q Consensus 743 -------------h~~~ivH~Dl~~~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~---~t~--------~y--~ 794 (851)
....++|||+++.||++++ +..+.++||+.+....+..+....... ..+ .| .
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 1245899999999999998 556889999998754221111000000 000 01 1
Q ss_pred C-ccccccCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 046438 795 A-PEYGREGQISTEGDVYSFGIMLMEIFTRKRPTD 828 (851)
Q Consensus 795 a-PE~~~~~~~~~~~DvwslG~il~el~~g~~pf~ 828 (851)
. |+.... .....+.|+++.++|++.+|+.+|-
T Consensus 256 ~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 256 DIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp CHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 1 111110 1122589999999999999998874
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.90 E-value=1e-09 Score=117.27 Aligned_cols=115 Identities=16% Similarity=0.202 Sum_probs=67.5
Q ss_pred chhcCCcccccccccccccccCCCccccCCCCccEEeccccccccccchhhc--CcccccEEEccC--ccccCC-----C
Q 046438 82 NIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIG--NLRNLQALGLLS--NNLVGV-----V 152 (851)
Q Consensus 82 ~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~L~~--n~l~~~-----~ 152 (851)
.++..+|+|+.|+|++|.-. .++. +. +++|++|+|+.|.+.......+. .+++|++|+|+. |...+. +
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l 242 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVF 242 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGT
T ss_pred HHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHH
Confidence 34566778888888776311 1222 33 67888888888877644444443 678888888753 221111 0
Q ss_pred Cccc--cCCCcCcEEEeeccccccccchhHhh--hcccccccccccccccc
Q 046438 153 PATL--FNISTLKILQLTNNTLSGSISSSIRL--ALPNLELFSLANNNFSG 199 (851)
Q Consensus 153 ~~~l--~~l~~L~~L~L~~n~l~~~~~~~~~~--~l~~L~~L~L~~N~i~~ 199 (851)
...+ ..+++|+.|+|.+|.+.+..+..++. .+|+|++|+|+.|.+++
T Consensus 243 ~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 243 RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp GGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred HHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 1122 24678888888888776544444432 35566666666666654
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.56 E-value=3.2e-07 Score=97.08 Aligned_cols=137 Identities=18% Similarity=0.190 Sum_probs=100.6
Q ss_pred CCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCC----CcccceeeeeecCCeeEEEEe
Q 046438 627 QFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRH----RNLVRIISSCTNDDFKALVLD 702 (851)
Q Consensus 627 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~~~~~~~~lv~e 702 (851)
.+...+.++.|....||++ +..+++|+.... .....+.+|.++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5666789999999999998 677999986432 223568899999998865 123445544 45689999
Q ss_pred ccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 046438 703 YMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGH--------------------------------------- 743 (851)
Q Consensus 703 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h--------------------------------------- 743 (851)
|++|.++..... ..++..+...++.++++.++.||...
T Consensus 108 ~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 999998864321 23455566677777777777776322
Q ss_pred ---------------------CCCcEecCCCCCCEEECCCCcEEEeeccCcccc
Q 046438 744 ---------------------PNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 744 ---------------------~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
...++|||++|.||+++.+..+.|+||+.+...
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 224599999999999998766799999998754
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.52 E-value=1.4e-08 Score=102.75 Aligned_cols=106 Identities=26% Similarity=0.321 Sum_probs=64.2
Q ss_pred hcCCccccc--ccccccccc---cCCCccccCCCCccEEecccccccc--ccchhhcCcccccEEEccCccccCCCCccc
Q 046438 84 FSYLPFVQF--LSLAFNQFA---GHLPREIGNLTSLTSIDLSENHLMG--EIPHEIGNLRNLQALGLLSNNLVGVVPATL 156 (851)
Q Consensus 84 ~~~l~~L~~--L~L~~N~i~---~~~~~~l~~l~~L~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l 156 (851)
|...+.|+. ++++.|+.. ..++....++++|+.|+||+|+|++ .+|..+..+++|+.|+|++|++.+. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 455566665 666666433 2222222456777788888887775 3456666777777777777777755 223
Q ss_pred cCCC--cCcEEEeeccccccccc------hhHhhhcccccccc
Q 046438 157 FNIS--TLKILQLTNNTLSGSIS------SSIRLALPNLELFS 191 (851)
Q Consensus 157 ~~l~--~L~~L~L~~n~l~~~~~------~~~~~~l~~L~~L~ 191 (851)
..+. +|++|+|++|.+.+.++ ..++..+|+|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 3333 77777777777765444 22344566666554
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.50 E-value=1.7e-08 Score=97.34 Aligned_cols=68 Identities=15% Similarity=0.183 Sum_probs=31.5
Q ss_pred cccCCCCccEEeccccccccc----cchhhcCcccccEEEccCccccCC----CCccccCCCcCcEEEe--ecccccc
Q 046438 107 EIGNLTSLTSIDLSENHLMGE----IPHEIGNLRNLQALGLLSNNLVGV----VPATLFNISTLKILQL--TNNTLSG 174 (851)
Q Consensus 107 ~l~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L--~~n~l~~ 174 (851)
.+...++|++|+|++|.+... +.+.+...++|++|+|++|+|... +...+...++|++|+| ++|.+.+
T Consensus 60 ~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 60 ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 334445555555555555421 223333344555555555555432 1233344445555555 4555543
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.50 E-value=1.1e-08 Score=98.51 Aligned_cols=42 Identities=14% Similarity=0.122 Sum_probs=18.5
Q ss_pred cCCCCCccEEEc--cCcccCCC----CcccccCCCCCCEEECCCCccc
Q 046438 451 IGGLKNLQNLSL--GDNNLQGS----IPNSIGDLISLECLDLSNNILS 492 (851)
Q Consensus 451 ~~~l~~L~~L~L--~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 492 (851)
+...+.|++|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 117 L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 117 LQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 334444555555 44555422 1222333344555555555443
No 418
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.43 E-value=1.9e-06 Score=90.25 Aligned_cols=137 Identities=14% Similarity=0.083 Sum_probs=95.6
Q ss_pred cceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCC---cccceeeeee-cCCeeEEEEeccCC
Q 046438 631 NNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHR---NLVRIISSCT-NDDFKALVLDYMPK 706 (851)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~ 706 (851)
++.++.|....||+. |..+++|+... ......+.+|+++++.+.+. .+.+++.+.. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 467889999999987 57789998532 23446789999999999752 3556666663 44567899999999
Q ss_pred CChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhc--------------------------------------------
Q 046438 707 GSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFG-------------------------------------------- 742 (851)
Q Consensus 707 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~-------------------------------------------- 742 (851)
.++...... .++......++.++++.++.||..
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 888653211 123444445555555555555432
Q ss_pred -------------CCCCcEecCCCCCCEEECC---CCc-EEEeeccCcccc
Q 046438 743 -------------HPNPVVHCDIKPSNVLLDE---DMV-ARLGDFGIAKLL 776 (851)
Q Consensus 743 -------------h~~~ivH~Dl~~~Nill~~---~~~-~kl~Dfg~a~~~ 776 (851)
....++|||+++.||+++. ++. +.|+||+.+...
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 3346799999999999987 455 589999988754
No 419
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.39 E-value=1.1e-07 Score=96.14 Aligned_cols=91 Identities=23% Similarity=0.223 Sum_probs=58.6
Q ss_pred cccchhhhh--hhccCCcccccCCc----ccCCCCCccEEEccCcccCC--CCcccccCCCCCCEEECCCCcccccCCcc
Q 046438 427 IGNLKVLVE--LYLSRNNLSGDIPT----TIGGLKNLQNLSLGDNNLQG--SIPNSIGDLISLECLDLSNNILSGIIPSS 498 (851)
Q Consensus 427 ~~~l~~L~~--L~L~~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 498 (851)
|...+.|+. ++++.|+.. .++. ....+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 344455665 666777443 2222 22456778888888888876 3345666778888888888888754 33
Q ss_pred ccccc--cccceeccCccccccCC
Q 046438 499 LEKLL--YLKYLNVSFNRLEGEIP 520 (851)
Q Consensus 499 l~~l~--~L~~l~l~~N~l~~~~p 520 (851)
+..+. +|++|+|++|++++.+|
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhhcccCCcceEEccCCcCccccC
Confidence 44444 77888888888877655
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.38 E-value=1.3e-06 Score=90.41 Aligned_cols=76 Identities=14% Similarity=0.121 Sum_probs=59.8
Q ss_pred ccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCC---cccceeeeeecCCeeEEEEeccCC
Q 046438 630 VNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHR---NLVRIISSCTNDDFKALVLDYMPK 706 (851)
Q Consensus 630 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~~ 706 (851)
-.+.++.|.++.||+++..+|+.+++|+...........+.+|++.++.+++. .+++++++. ..++||||++|
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 45789999999999999888999999986533222235789999999999865 466777653 35899999999
Q ss_pred CCh
Q 046438 707 GSL 709 (851)
Q Consensus 707 g~L 709 (851)
+++
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 875
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.38 E-value=2.2e-06 Score=88.20 Aligned_cols=137 Identities=21% Similarity=0.107 Sum_probs=97.8
Q ss_pred ceeccccce-EEEEEEEc-CCcEEEEEEEeecchhhHHHHHHHHHHHhhcC-CCcccceeeeeecCCeeEEEEeccCCCC
Q 046438 632 NLIGSGSFG-SVYRGRFL-DGMEVAIKVFHLQLEGALESFNAECEVLRSIR-HRNLVRIISSCTNDDFKALVLDYMPKGS 708 (851)
Q Consensus 632 ~~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g~ 708 (851)
+.+..|..| .||+.... ++..+++|+-.. .....+.+|+++++.+. +-.+.++++++.+.+..++|||+++|.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 455666665 69988764 466799998653 23466888999998885 3346788899988899999999999988
Q ss_pred hhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhc----------------------------------------------
Q 046438 709 LEACLYSDNSNLDIFKRLNIVIDIALALEYLHFG---------------------------------------------- 742 (851)
Q Consensus 709 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~---------------------------------------------- 742 (851)
+.+..... ......+..++++.++.||..
T Consensus 107 ~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 107 AFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred ccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 76654221 122334555666666666521
Q ss_pred ---------CCCCcEecCCCCCCEEECCCCcEEEeeccCcccc
Q 046438 743 ---------HPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 743 ---------h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
+...++|||+++.||+++.++.+-|+||+.+...
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 1224899999999999998877789999988653
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.34 E-value=2.5e-06 Score=91.52 Aligned_cols=77 Identities=9% Similarity=0.084 Sum_probs=58.4
Q ss_pred CCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCc--ccceeeeeecC-CeeEEEEecc
Q 046438 628 FNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRN--LVRIISSCTND-DFKALVLDYM 704 (851)
Q Consensus 628 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~-~~~~lv~e~~ 704 (851)
....+.++.|....+|+.+. +++.+++|+.... ..+.+|+.+++.+.... +.+++.++... +..++||||+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 33457889999999999876 6888999987533 35888999999886543 45677766654 5689999999
Q ss_pred CCCChh
Q 046438 705 PKGSLE 710 (851)
Q Consensus 705 ~~g~L~ 710 (851)
+|.++.
T Consensus 117 ~G~~l~ 122 (362)
T 3ovc_A 117 QGVTLQ 122 (362)
T ss_dssp CSEETT
T ss_pred CCCCcc
Confidence 986653
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.22 E-value=1.6e-06 Score=93.40 Aligned_cols=80 Identities=11% Similarity=0.033 Sum_probs=56.4
Q ss_pred ccee-ccccceEEEEEEEc-------CCcEEEEEEEeecch--h-hHHHHHHHHHHHhhcCC---CcccceeeeeecC--
Q 046438 631 NNLI-GSGSFGSVYRGRFL-------DGMEVAIKVFHLQLE--G-ALESFNAECEVLRSIRH---RNLVRIISSCTND-- 694 (851)
Q Consensus 631 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~--~-~~~~~~~e~~~l~~l~h---~niv~~~~~~~~~-- 694 (851)
.+.| +.|....+|++... +++.+++|+...... . ....+.+|+++++.+.. -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3677 88999999998764 267899998654320 0 12457888999888853 3466788777655
Q ss_pred -CeeEEEEeccCCCChh
Q 046438 695 -DFKALVLDYMPKGSLE 710 (851)
Q Consensus 695 -~~~~lv~e~~~~g~L~ 710 (851)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999987654
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.11 E-value=6.5e-07 Score=83.65 Aligned_cols=101 Identities=17% Similarity=0.214 Sum_probs=67.4
Q ss_pred cccccccccccccccCCCccccCCCCccEEeccccc-cccccchhhcCc----ccccEEEccCcc-ccCCCCccccCCCc
Q 046438 88 PFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLSENH-LMGEIPHEIGNL----RNLQALGLLSNN-LVGVVPATLFNIST 161 (851)
Q Consensus 88 ~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~n~-l~~~~~~~~~~l----~~L~~L~L~~n~-l~~~~~~~l~~l~~ 161 (851)
.+|++|||+++.|+..--..+.++++|++|+|++|. +++.--..++.+ ++|++|+|++|. |++..-..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 457777887777775544567788888888888885 664444455554 478888888874 76554456677888
Q ss_pred CcEEEeeccc-cccc--cchhHhhhccccc
Q 046438 162 LKILQLTNNT-LSGS--ISSSIRLALPNLE 188 (851)
Q Consensus 162 L~~L~L~~n~-l~~~--~~~~~~~~l~~L~ 188 (851)
|++|+|++|. +++. ....+...+|+++
T Consensus 141 L~~L~L~~c~~Itd~gl~~~~L~~~lP~l~ 170 (176)
T 3e4g_A 141 LKYLFLSDLPGVKEKEKIVQAFKTSLPSLE 170 (176)
T ss_dssp CCEEEEESCTTCCCHHHHHHHHHHHCTTCE
T ss_pred CCEEECCCCCCCCchHHHHHHHHHHCCCcE
Confidence 8888888885 4432 1233334556554
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.03 E-value=1.2e-05 Score=87.64 Aligned_cols=75 Identities=17% Similarity=0.170 Sum_probs=49.6
Q ss_pred cceeccccceEEEEEEEc-CCcEEEEEEEeecch-------hhHHHHHHHHHHHhhcCC--Cccc-ceeeeeecCCeeEE
Q 046438 631 NNLIGSGSFGSVYRGRFL-DGMEVAIKVFHLQLE-------GALESFNAECEVLRSIRH--RNLV-RIISSCTNDDFKAL 699 (851)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~niv-~~~~~~~~~~~~~l 699 (851)
.+.+|.|..+.||+++.. +++.+++|....... ...+++..|.++++.+.. +..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 468999999999999753 468899998653211 123456789999988742 4444 45543 3345689
Q ss_pred EEeccCCC
Q 046438 700 VLDYMPKG 707 (851)
Q Consensus 700 v~e~~~~g 707 (851)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.92 E-value=5.6e-05 Score=80.57 Aligned_cols=139 Identities=14% Similarity=0.093 Sum_probs=80.8
Q ss_pred ceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCC--Ccccceeee------eecCCeeEEEEec
Q 046438 632 NLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRH--RNLVRIISS------CTNDDFKALVLDY 703 (851)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~------~~~~~~~~lv~e~ 703 (851)
+.++.|..+.||++...+ ..+++|+..... ..+..|.++++.+.. -.+.+++.. ....+..+++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~-~~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDS-GAVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETT-EEEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCC-CCEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 456667789999998744 459999987531 334455666665532 123444431 1345677899999
Q ss_pred cCCCChh-----H---------Hhhc--CCC--C---------cCHHHH-------------------------------
Q 046438 704 MPKGSLE-----A---------CLYS--DNS--N---------LDIFKR------------------------------- 725 (851)
Q Consensus 704 ~~~g~L~-----~---------~l~~--~~~--~---------~~~~~~------------------------------- 725 (851)
++|..+. . .++. ... + ..|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 0 0111 100 0 112110
Q ss_pred HHHHHHHHHHHHHHHh----------cCCCCcEecCCCCCCEEECCCCcEEEeeccCccc
Q 046438 726 LNIVIDIALALEYLHF----------GHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKL 775 (851)
Q Consensus 726 ~~i~~~i~~~l~~L~~----------~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~ 775 (851)
..+..++..++++|+. ....+++|||+++.||+++.++.+.|+||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 0111223345566642 1357899999999999998888999999998864
No 427
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.89 E-value=7.1e-06 Score=73.28 Aligned_cols=84 Identities=21% Similarity=0.241 Sum_probs=60.1
Q ss_pred cEEEccCcccC-CCCcccccCCCCCCEEECCCCcccccCCccccccccccceeccCccccccCCCCCcccccCcc--ccc
Q 046438 458 QNLSLGDNNLQ-GSIPNSIGDLISLECLDLSNNILSGIIPSSLEKLLYLKYLNVSFNRLEGEIPRGGTLANFTSE--SFM 534 (851)
Q Consensus 458 ~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~l~~~--~~~ 534 (851)
..++.++++++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|+|.|++.......++... ...
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~~l~~wl~~~~~~~~ 88 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVPLRAWLAGRPERAP 88 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGHHHHHHHHTSSCSGG
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccHHHHHHHHhCccccc
Confidence 37888999886 35665443 47999999999999877888999999999999999999998643322222221 112
Q ss_pred CCcCccCCC
Q 046438 535 GNDLLCGSP 543 (851)
Q Consensus 535 ~n~~~c~~~ 543 (851)
.....|..|
T Consensus 89 ~~~~~C~~P 97 (130)
T 3rfe_A 89 YRDLRCVAP 97 (130)
T ss_dssp GTTCBCCBS
T ss_pred ccCcEeCcC
Confidence 334567666
No 428
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.85 E-value=2.4e-05 Score=86.01 Aligned_cols=81 Identities=9% Similarity=0.083 Sum_probs=50.4
Q ss_pred CCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCccccccccCccccCccccccCC---CCcchhhHHHHHHHHH
Q 046438 743 HPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQ---ISTEGDVYSFGIMLME 819 (851)
Q Consensus 743 h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---~~~~~DvwslG~il~e 819 (851)
+...++|||+++.||+++.++ ++++||+.+....+..+.......-...|.+|+...... .....++.+....+|+
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 578899999999999998876 999999998754221111110000123466666543211 1223455678888888
Q ss_pred HHhCC
Q 046438 820 IFTRK 824 (851)
Q Consensus 820 l~~g~ 824 (851)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.74 E-value=1.1e-05 Score=75.37 Aligned_cols=37 Identities=8% Similarity=0.173 Sum_probs=17.2
Q ss_pred ccEEEccCccccCCCCccccCCCcCcEEEeeccc-ccc
Q 046438 138 LQALGLLSNNLVGVVPATLFNISTLKILQLTNNT-LSG 174 (851)
Q Consensus 138 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~-l~~ 174 (851)
|++||++++.++...-..+.++++|++|+|++|. +++
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD 100 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIED 100 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCH
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCH
Confidence 4444444444333333334455556666666553 443
No 430
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.74 E-value=0.00022 Score=74.13 Aligned_cols=136 Identities=15% Similarity=0.090 Sum_probs=91.6
Q ss_pred cceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcC---CCcccceeeeeecCCeeEEEEeccCCC
Q 046438 631 NNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIR---HRNLVRIISSCTNDDFKALVLDYMPKG 707 (851)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~g 707 (851)
.+.++.|....+|+... ++..+++|+.... ....+..|++.++.+. ...+++++.+....+..++||||++|.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 46799999999999975 5778999987643 3467889999998884 356788888888778899999999988
Q ss_pred ChhH-----------HhhcCCC--C-------------------cCHHHHH---HHHH----------------HHHHH-
Q 046438 708 SLEA-----------CLYSDNS--N-------------------LDIFKRL---NIVI----------------DIALA- 735 (851)
Q Consensus 708 ~L~~-----------~l~~~~~--~-------------------~~~~~~~---~i~~----------------~i~~~- 735 (851)
.... .++.... . -+|.... ++.. ++++.
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6521 1222111 0 1232211 1111 11111
Q ss_pred HHHHHh-cCCCCcEecCCCCCCEEECCCCcEEEeecc
Q 046438 736 LEYLHF-GHPNPVVHCDIKPSNVLLDEDMVARLGDFG 771 (851)
Q Consensus 736 l~~L~~-~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg 771 (851)
...|.. .....++|||+.+.|++++.++ +.|+|++
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 123311 1256799999999999999887 8899984
No 431
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.62 E-value=0.00014 Score=76.61 Aligned_cols=157 Identities=16% Similarity=0.178 Sum_probs=90.2
Q ss_pred ccHHHHHHHhcCCCc-----cceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCc--cccee
Q 046438 616 FSYQELLQATDQFNV-----NNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRN--LVRII 688 (851)
Q Consensus 616 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~ 688 (851)
++.+++.....+|.+ .+.++.|....+|++...+| .+++|+..... ..+.+..|.++++.+...+ +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 455666666666765 34577788899999987555 68899887531 2244667888877774322 23333
Q ss_pred ee------eecCCeeEEEEeccCCCChhH-----H---------hhcC--C--CC----cC---HHHHHH----------
Q 046438 689 SS------CTNDDFKALVLDYMPKGSLEA-----C---------LYSD--N--SN----LD---IFKRLN---------- 727 (851)
Q Consensus 689 ~~------~~~~~~~~lv~e~~~~g~L~~-----~---------l~~~--~--~~----~~---~~~~~~---------- 727 (851)
.. ....+..+++|+|++|..+.. + ++.. . .. .. |.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 22 122356789999999865321 0 1110 0 00 01 111000
Q ss_pred --HHHHHHHHHHHHHhc----CCCCcEecCCCCCCEEECCCCcEEEeeccCccc
Q 046438 728 --IVIDIALALEYLHFG----HPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKL 775 (851)
Q Consensus 728 --i~~~i~~~l~~L~~~----h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~ 775 (851)
+...+.+.++.+... ...+++|+|+++.||+++.++.+.++||+.+..
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011234445555321 246899999999999998876668999998864
No 432
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.60 E-value=0.0002 Score=74.12 Aligned_cols=79 Identities=14% Similarity=0.123 Sum_probs=57.3
Q ss_pred CCCccceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCC---cccceeeeeecCCeeEEEEec
Q 046438 627 QFNVNNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHR---NLVRIISSCTNDDFKALVLDY 703 (851)
Q Consensus 627 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~ 703 (851)
+..-++.+|.|..+.||+++..+|++|++|+...........+..|++.++.+... .+++++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 44556789999999999999999999999986543333335678899999988532 244555432 23789999
Q ss_pred cCCCCh
Q 046438 704 MPKGSL 709 (851)
Q Consensus 704 ~~~g~L 709 (851)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987653
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.42 E-value=6.8e-05 Score=71.41 Aligned_cols=123 Identities=9% Similarity=0.135 Sum_probs=56.6
Q ss_pred hhcCcccccEEEccCc-cccCC----CCccccCCCcCcEEEeeccccccccchhHhhhcccccccccccccccccCCccc
Q 046438 131 EIGNLRNLQALGLLSN-NLVGV----VPATLFNISTLKILQLTNNTLSGSISSSIRLALPNLELFSLANNNFSGKIPSFI 205 (851)
Q Consensus 131 ~~~~l~~L~~L~L~~n-~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~ 205 (851)
.+.+-+.|++|+|++| +|... +...+..-+.|+.|+|++|+|.+.....+. ..+
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA---------------------~aL 94 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLI---------------------ELI 94 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHH---------------------HHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHH---------------------HHH
Confidence 3444556666666654 44321 122333445566666666655533222222 222
Q ss_pred cccCCCcEEecCCCCCccccC----ccccCCCCcceEeccCccccCCCCc--chhhhhccccccccEEeccCCCc
Q 046438 206 FNASKLSICELPDNSFSGFIP----NRFHNMRNLKELNLEYNYITSSNHE--LSFISSLANSKKLKVLSLTGNPL 274 (851)
Q Consensus 206 ~~~~~L~~L~L~~n~l~~~~~----~~~~~l~~L~~L~L~~N~i~~~~~~--~~~~~~l~~l~~L~~L~Ls~N~l 274 (851)
...+.|+.|+|+.|.|+.... +++..-+.|++|+|++|....++.. ..+...+...+.|+.|+++.|.+
T Consensus 95 ~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 95 ETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred hcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 234455555555555543222 2333345566666654422111111 12334555666666666665543
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.36 E-value=0.001 Score=70.22 Aligned_cols=157 Identities=10% Similarity=0.074 Sum_probs=90.3
Q ss_pred ccHHHHHHHhcCCCc-----cceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCc--cccee
Q 046438 616 FSYQELLQATDQFNV-----NNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRN--LVRII 688 (851)
Q Consensus 616 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~ 688 (851)
.+.+.+....+.|.+ .+.++ |....||++...+|+.+++|+..... ...+.+..|.++++.+.... +++++
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~ 88 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPV 88 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeeccee
Confidence 444555555444433 34576 88889999877667789999986431 12356777888888774322 34444
Q ss_pred ee-----eecCCeeEEEEeccCCCChh-----HH---------hhc--C------CCCcCHHHH----HH----------
Q 046438 689 SS-----CTNDDFKALVLDYMPKGSLE-----AC---------LYS--D------NSNLDIFKR----LN---------- 727 (851)
Q Consensus 689 ~~-----~~~~~~~~lv~e~~~~g~L~-----~~---------l~~--~------~~~~~~~~~----~~---------- 727 (851)
.. ....+..+++|||++|..+. .+ ++. . ....++... ..
T Consensus 89 ~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (328)
T 1zyl_A 89 AFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPS 168 (328)
T ss_dssp CBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCT
T ss_pred ecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCH
Confidence 43 12244567899999875432 00 111 0 001111110 00
Q ss_pred -----HHHHHHHHHHHHHh----cCCCCcEecCCCCCCEEECCCCcEEEeeccCcccc
Q 046438 728 -----IVIDIALALEYLHF----GHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 728 -----i~~~i~~~l~~L~~----~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
+...+.+.++.+.. .....++|||+++.||+++ + .+.++||+.+...
T Consensus 169 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 169 GLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 01111122222221 1456789999999999999 4 8999999987653
No 435
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.35 E-value=0.00046 Score=73.81 Aligned_cols=139 Identities=17% Similarity=0.209 Sum_probs=82.8
Q ss_pred ceeccccceEEEEEEEc--------CCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcc-cceeeeeecCCeeEEEEe
Q 046438 632 NLIGSGSFGSVYRGRFL--------DGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNL-VRIISSCTNDDFKALVLD 702 (851)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e 702 (851)
+.+..|....+|++... +++.|++|+.... ........+|.++++.+...++ .++++.+.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 57778889999999864 2478999986332 1233556789999988853333 556666643 38999
Q ss_pred ccCCCChhHH-----------------hhcC----CCCcC--HHHHHHHHHHHHH-------------------HHHHH-
Q 046438 703 YMPKGSLEAC-----------------LYSD----NSNLD--IFKRLNIVIDIAL-------------------ALEYL- 739 (851)
Q Consensus 703 ~~~~g~L~~~-----------------l~~~----~~~~~--~~~~~~i~~~i~~-------------------~l~~L- 739 (851)
|++|.++..- ++.- .+... +.++.++..++.. .++.|
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998654310 1111 11122 2333333333211 12222
Q ss_pred ---H-hcCCCCcEecCCCCCCEEECCC----CcEEEeeccCccc
Q 046438 740 ---H-FGHPNPVVHCDIKPSNVLLDED----MVARLGDFGIAKL 775 (851)
Q Consensus 740 ---~-~~h~~~ivH~Dl~~~Nill~~~----~~~kl~Dfg~a~~ 775 (851)
. ......++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1 1244579999999999999876 7899999999864
No 436
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.30 E-value=0.00046 Score=75.61 Aligned_cols=73 Identities=16% Similarity=0.283 Sum_probs=50.7
Q ss_pred cceeccccceEEEEEEEcC--------CcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcc-cceeeeeecCCeeEEEE
Q 046438 631 NNLIGSGSFGSVYRGRFLD--------GMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNL-VRIISSCTNDDFKALVL 701 (851)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~ 701 (851)
++.|+.|....||++...+ ++.+++|+.... ...+.+.+|..+++.+...++ .++++.+.+ ++||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3678889999999998753 578999998542 111445579999888854444 566665542 3899
Q ss_pred eccCCCCh
Q 046438 702 DYMPKGSL 709 (851)
Q Consensus 702 e~~~~g~L 709 (851)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987443
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.26 E-value=7.5e-05 Score=71.10 Aligned_cols=74 Identities=11% Similarity=0.211 Sum_probs=44.3
Q ss_pred ccCCCCccEEecccc-cccc----ccchhhcCcccccEEEccCccccCCCC----ccccCCCcCcEEEeeccccccccch
Q 046438 108 IGNLTSLTSIDLSEN-HLMG----EIPHEIGNLRNLQALGLLSNNLVGVVP----ATLFNISTLKILQLTNNTLSGSISS 178 (851)
Q Consensus 108 l~~l~~L~~L~Ls~n-~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~----~~l~~l~~L~~L~L~~n~l~~~~~~ 178 (851)
+.+-+.|++|+|++| .|.. .+.+.+..-+.|+.|+|++|+|..... ..+..-+.|++|+|++|.|.+....
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344456777777764 5542 244556666777777777777754332 2333456777777777777654444
Q ss_pred hHh
Q 046438 179 SIR 181 (851)
Q Consensus 179 ~~~ 181 (851)
.+.
T Consensus 117 ala 119 (197)
T 1pgv_A 117 RLL 119 (197)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 438
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.26 E-value=0.00026 Score=73.70 Aligned_cols=137 Identities=15% Similarity=0.148 Sum_probs=77.6
Q ss_pred cceeccccceEEEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcc-cceeeeeecCCeeEEEEecc-CCCC
Q 046438 631 NNLIGSGSFGSVYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNL-VRIISSCTNDDFKALVLDYM-PKGS 708 (851)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~g~ 708 (851)
++.++.|....+|++ ..+++|+....... .....+|+++++.+...++ .+++++. .+.-++|+||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 688999999999998 56899987643221 1223568888887754333 4555543 33347899999 6654
Q ss_pred hhHH------------------hhcCCCC----cCHHH-HHHHH--------------HHHHHHH----HHHH-hcCCCC
Q 046438 709 LEAC------------------LYSDNSN----LDIFK-RLNIV--------------IDIALAL----EYLH-FGHPNP 746 (851)
Q Consensus 709 L~~~------------------l~~~~~~----~~~~~-~~~i~--------------~~i~~~l----~~L~-~~h~~~ 746 (851)
+... ++..... ..... ...+. ..+.+.+ +.+. ......
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 4210 1111110 01110 00000 0011111 1111 123456
Q ss_pred cEecCCCCCCEEECCCCcEEEeeccCcccc
Q 046438 747 VVHCDIKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 747 ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
++|+|+.+.||+ ..++.+.++||..+...
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 899999999999 56677899999988754
No 439
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.22 E-value=0.0012 Score=69.84 Aligned_cols=140 Identities=13% Similarity=0.065 Sum_probs=73.8
Q ss_pred ceeccccceE-EEEEEEcCCcEEEEEEEeecchhhHHHHHHHHHHHhhcCCC--cccceeeeeecCCeeEEEEeccCCCC
Q 046438 632 NLIGSGSFGS-VYRGRFLDGMEVAIKVFHLQLEGALESFNAECEVLRSIRHR--NLVRIISSCTNDDFKALVLDYMPKGS 708 (851)
Q Consensus 632 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~~~~~lv~e~~~~g~ 708 (851)
+.++.|.... +|+....+++.+++|...... .+.+..|+++++.+... .+.+++.+..+.+ +++||++++..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4566666555 667764346778787643321 13345677777776432 3456666543333 68999997765
Q ss_pred hhHHhh---------------------cCC----CCcCHHHHH---------H-----------HHHHHHHHHHHHH---
Q 046438 709 LEACLY---------------------SDN----SNLDIFKRL---------N-----------IVIDIALALEYLH--- 740 (851)
Q Consensus 709 L~~~l~---------------------~~~----~~~~~~~~~---------~-----------i~~~i~~~l~~L~--- 740 (851)
+.+.+. ... ...+..... . ....+.+.++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 543221 100 011111100 0 0011112222221
Q ss_pred hcCCCCcEecCCCCCCEEECCC----CcEEEeeccCcccc
Q 046438 741 FGHPNPVVHCDIKPSNVLLDED----MVARLGDFGIAKLL 776 (851)
Q Consensus 741 ~~h~~~ivH~Dl~~~Nill~~~----~~~kl~Dfg~a~~~ 776 (851)
..+...++|||+.+.||+++.+ +.+.|+||+.+..-
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1246789999999999999875 68999999998754
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.15 E-value=0.0013 Score=72.31 Aligned_cols=74 Identities=12% Similarity=0.169 Sum_probs=49.1
Q ss_pred cceeccccceEEEEEEEcC-CcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcc-cceeeeeecCCeeEEEEeccCCCC
Q 046438 631 NNLIGSGSFGSVYRGRFLD-GMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNL-VRIISSCTNDDFKALVLDYMPKGS 708 (851)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~g~ 708 (851)
++.|+.|....+|++...+ +..+++|+........ -+..+|..+++.+...++ .++++.+. + +.||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 4678889999999998754 4789999875432211 122578999998875555 45666663 2 36999998754
Q ss_pred h
Q 046438 709 L 709 (851)
Q Consensus 709 L 709 (851)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.98 E-value=0.0012 Score=70.86 Aligned_cols=73 Identities=12% Similarity=0.255 Sum_probs=45.3
Q ss_pred ceeccccceEEEEEEEcC---------CcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcc-cceeeeeecCCeeEEEE
Q 046438 632 NLIGSGSFGSVYRGRFLD---------GMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNL-VRIISSCTNDDFKALVL 701 (851)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~ 701 (851)
+.++.|....+|++...+ ++.+++|+....... ......|.++++.+...++ .++++... -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 567888899999998743 268899987543221 1234678888888854343 45665442 26899
Q ss_pred eccCCCCh
Q 046438 702 DYMPKGSL 709 (851)
Q Consensus 702 e~~~~g~L 709 (851)
||++|.++
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.91 E-value=0.00098 Score=59.23 Aligned_cols=55 Identities=24% Similarity=0.370 Sum_probs=27.5
Q ss_pred EEEcCCCccc-ccccCCCCCCCcEEeCCCCCCCCCCCcchhcCCccccccccccccc
Q 046438 45 ILDLSNNQLS-GSFPFFNMSSLQVIDLSDNRLSGELPANIFSYLPFVQFLSLAFNQF 100 (851)
Q Consensus 45 ~L~Ls~n~l~-~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~N~i 100 (851)
.++.++++++ ..+|-.-.++|++|||++|+|+ .+|..+|..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFPVDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCCTTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCCcCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCe
Confidence 4555555554 1222223344555555555555 55555555555555555555544
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.79 E-value=0.007 Score=63.90 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=29.0
Q ss_pred CCCcEecCCCCCCEEECCCCcEEEeeccCcccc
Q 046438 744 PNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLL 776 (851)
Q Consensus 744 ~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~ 776 (851)
...++|+|+.+.||+++.++.+.++||+.+...
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 357999999999999998888999999987654
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.52 E-value=0.0057 Score=65.56 Aligned_cols=140 Identities=17% Similarity=0.223 Sum_probs=83.2
Q ss_pred ceeccccceEEEEEEEcC--------CcEEEEEEEeecchh---------h---------HHHHHHHHHHHhhcCCCc-c
Q 046438 632 NLIGSGSFGSVYRGRFLD--------GMEVAIKVFHLQLEG---------A---------LESFNAECEVLRSIRHRN-L 684 (851)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~---------~---------~~~~~~e~~~l~~l~h~n-i 684 (851)
+.+..|-...+|++...+ +..|.+++.-...+. . .+....|.++++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 567778899999997743 367899987543211 0 112335888888885444 4
Q ss_pred cceeeeeecCCeeEEEEeccCCCChhH--H---------------hhcC----CCCcC--HHHHHHHHHHHH--------
Q 046438 685 VRIISSCTNDDFKALVLDYMPKGSLEA--C---------------LYSD----NSNLD--IFKRLNIVIDIA-------- 733 (851)
Q Consensus 685 v~~~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~----~~~~~--~~~~~~i~~~i~-------- 733 (851)
.++++++.+ .+|+||++|.++.. + ++.. ..... +....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 566766643 38999999755421 0 1111 11122 112222222221
Q ss_pred --------------HHH----HHHH-hcCCCCcEecCCCCCCEEECCC------CcEEEeeccCccc
Q 046438 734 --------------LAL----EYLH-FGHPNPVVHCDIKPSNVLLDED------MVARLGDFGIAKL 775 (851)
Q Consensus 734 --------------~~l----~~L~-~~h~~~ivH~Dl~~~Nill~~~------~~~kl~Dfg~a~~ 775 (851)
+.+ +++. ......++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 2221 1245679999999999999876 7899999998864
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.12 E-value=0.0058 Score=66.22 Aligned_cols=74 Identities=14% Similarity=0.243 Sum_probs=49.6
Q ss_pred cceeccccceEEEEEEEcC--------CcEEEEEEEeecchhhHHHHHHHHHHHhhcCCCcc-cceeeeeecCCeeEEEE
Q 046438 631 NNLIGSGSFGSVYRGRFLD--------GMEVAIKVFHLQLEGALESFNAECEVLRSIRHRNL-VRIISSCTNDDFKALVL 701 (851)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~ 701 (851)
++.+..|....+|++...+ ++.|++|+....... .-+..+|.++++.+...++ .++++.+. -+.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3677888999999998753 578999986443211 1234678888888854334 45555332 26899
Q ss_pred eccCCCCh
Q 046438 702 DYMPKGSL 709 (851)
Q Consensus 702 e~~~~g~L 709 (851)
||++|.++
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998654
No 446
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.49 E-value=0.098 Score=56.46 Aligned_cols=30 Identities=30% Similarity=0.360 Sum_probs=25.7
Q ss_pred CcEecCCCCCCEEE------CCCCcEEEeeccCccc
Q 046438 746 PVVHCDIKPSNVLL------DEDMVARLGDFGIAKL 775 (851)
Q Consensus 746 ~ivH~Dl~~~Nill------~~~~~~kl~Dfg~a~~ 775 (851)
.++|+|+.+.||++ +++..++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4567899999999864
No 447
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=93.58 E-value=0.16 Score=48.49 Aligned_cols=102 Identities=15% Similarity=0.057 Sum_probs=68.5
Q ss_pred ChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEECCCCcEEEeeccCccccCCCCCcccccc
Q 046438 708 SLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLLDEDMVARLGDFGIAKLLSGDESMKHTQT 787 (851)
Q Consensus 708 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 787 (851)
+|.+.+...+.+++++++|.++.|.+.++.-.-. ++.-..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 7889998889999999999999999999877632 11111333456889999999887653 1110
Q ss_pred ccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCC
Q 046438 788 LATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRP 826 (851)
Q Consensus 788 ~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p 826 (851)
.....+.+||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 ~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1233466888763 4557888999999999998874444
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=82.48 E-value=2.3 Score=40.52 Aligned_cols=123 Identities=11% Similarity=0.162 Sum_probs=80.4
Q ss_pred CCCcccceeeeeecCCeeEEEEeccCCCChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEEE
Q 046438 680 RHRNLVRIISSCTNDDFKALVLDYMPKGSLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVLL 759 (851)
Q Consensus 680 ~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nill 759 (851)
.||++++. .+..+++...+.++.-+ ...++- .-+..+...+++++.+|+....++ + .=+|--++|+|+++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~--~ik~~~~~eKlr~l~ni~~l~~~~---~--~r~tf~L~P~NL~f 112 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFD--NIKSFTKNEKLRYLLNIKNLEEVN---R--TRYTFVLAPDELFF 112 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGG--GGGGSCHHHHHHHHHHGGGGGGGG---G--SSEECCCSGGGEEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHH--HHHhcCHHHHHHHHHHHHHHHHHh---c--CceEEEEecceEEE
Confidence 57888876 45556666666666543 222221 124567788999999999877554 3 35788999999999
Q ss_pred CCCCcEEEeeccCccccCCCCCccccccccCccccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCccCcCcc
Q 046438 760 DEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSGEM 835 (851)
Q Consensus 760 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~ 835 (851)
+.++.+++.--|.-..+. |. ..++..=.-.+=+++..+++++..|+..-.|..
T Consensus 113 ~~~~~p~i~~RGik~~l~------------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G~l 165 (215)
T 4ann_A 113 TRDGLPIAKTRGLQNVVD------------------PL-----PVSEAEFLTRYKALVICAFNEKQSFDALVEGNL 165 (215)
T ss_dssp CTTSCEEESCCEETTTBS------------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHSCG
T ss_pred cCCCCEEEEEccCccCCC------------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcChH
Confidence 999999998776533221 11 122223344566788888999999876544433
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=68.07 E-value=13 Score=35.48 Aligned_cols=83 Identities=11% Similarity=0.187 Sum_probs=58.0
Q ss_pred CCCcccceeeeeecCCeeEEEEeccCCC-ChhHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCEE
Q 046438 680 RHRNLVRIISSCTNDDFKALVLDYMPKG-SLEACLYSDNSNLDIFKRLNIVIDIALALEYLHFGHPNPVVHCDIKPSNVL 758 (851)
Q Consensus 680 ~h~niv~~~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L~~~h~~~ivH~Dl~~~Nil 758 (851)
.||++ --.+-.+++...+.++.-+++ ++.. + +..+...+++++.+|+.... .|...-+|--++|+|++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-i----~~~~~~eKlrll~nl~~L~~----~~~~~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-I----RKTTLLSRIRAAIHLVSKVK----HHSARRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-H----HTSCHHHHHHHHHHHHHHHS----SCCSSSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-H----HhcCHHHHHHHHHHHHHHHH----HhhhCceeEEEeCceEE
Confidence 57777 334446666776777654333 3332 2 34677888888888887655 13445788899999999
Q ss_pred ECCCCcEEEeeccCc
Q 046438 759 LDEDMVARLGDFGIA 773 (851)
Q Consensus 759 l~~~~~~kl~Dfg~a 773 (851)
++.++.+++.-.|.-
T Consensus 117 f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 117 FNRALEPFFLHVGVK 131 (219)
T ss_dssp ECTTCCEEESCCEET
T ss_pred EeCCCcEEEEEcCCc
Confidence 999999999877753
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=67.62 E-value=0.65 Score=50.86 Aligned_cols=60 Identities=13% Similarity=0.076 Sum_probs=17.3
Q ss_pred CccceeccccceEEEEEEEcC-CcEEEE------EEEeecc--hhhHHHHHHHHHHHhhcCCCcccceeeee
Q 046438 629 NVNNLIGSGSFGSVYRGRFLD-GMEVAI------KVFHLQL--EGALESFNAECEVLRSIRHRNLVRIISSC 691 (851)
Q Consensus 629 ~~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 691 (851)
.+.+.+| ||.||+|.+.. ..+||+ |..+... ......+.+|+.+++..+|||+++.+++.
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 3456676 99999998853 467888 6654322 22335678889999999999999987654
No 451
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=60.43 E-value=1.3e+02 Score=34.09 Aligned_cols=25 Identities=28% Similarity=0.182 Sum_probs=23.4
Q ss_pred cCCCCCCEEECCCCcEEEeeccCcc
Q 046438 750 CDIKPSNVLLDEDMVARLGDFGIAK 774 (851)
Q Consensus 750 ~Dl~~~Nill~~~~~~kl~Dfg~a~ 774 (851)
||=+++|||++.+|.+.=+|||++.
T Consensus 551 GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 551 GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred CCCCCcceEEeCCCCEEEEeehhhh
Confidence 7889999999999999999999875
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=58.47 E-value=16 Score=29.90 Aligned_cols=42 Identities=12% Similarity=0.132 Sum_probs=18.4
Q ss_pred CCCcchhcCCcccccccccccccccCCCccccCCCCccEEecc
Q 046438 78 ELPANIFSYLPFVQFLSLAFNQFAGHLPREIGNLTSLTSIDLS 120 (851)
Q Consensus 78 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls 120 (851)
.+....|.++.+|+.+.|-.+ ++.+-..+|.+|.+|+.+.+.
T Consensus 10 ~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 10 GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 344444444444444444433 222333444444444444443
No 453
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=58.26 E-value=1.5e+02 Score=32.91 Aligned_cols=82 Identities=13% Similarity=0.103 Sum_probs=48.7
Q ss_pred cceeeeeecCCeeEEEEeccCCCChhHHhhcCC--------------CC--cCHHHHHHHHHHHH--HHHHHHHhcCCCC
Q 046438 685 VRIISSCTNDDFKALVLDYMPKGSLEACLYSDN--------------SN--LDIFKRLNIVIDIA--LALEYLHFGHPNP 746 (851)
Q Consensus 685 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------------~~--~~~~~~~~i~~~i~--~~l~~L~~~h~~~ 746 (851)
+..|.+........+ .|++++.++.+.+...+ .. ..+..+..++...| ..+.|+ .|
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YI-----LG 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYI-----LG 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHH-----HT
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhhee-----ee
Confidence 445555555544443 57777655554432210 01 12334444554433 345555 23
Q ss_pred cEecCCCCCCEEECCCCcEEEeeccCcc
Q 046438 747 VVHCDIKPSNVLLDEDMVARLGDFGIAK 774 (851)
Q Consensus 747 ivH~Dl~~~Nill~~~~~~kl~Dfg~a~ 774 (851)
=||=+++|||++.+|++.=+|||.+.
T Consensus 476 --igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 --VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 36889999999999999999999875
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=55.23 E-value=19 Score=29.40 Aligned_cols=47 Identities=15% Similarity=0.046 Sum_probs=30.6
Q ss_pred ccccCCCccccCCCCccEEeccccccccccchhhcCcccccEEEccCc
Q 046438 99 QFAGHLPREIGNLTSLTSIDLSENHLMGEIPHEIGNLRNLQALGLLSN 146 (851)
Q Consensus 99 ~i~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 146 (851)
.++.+-..+|.+|++|+.+.+-.+ ++..-..+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 344455567777777777777665 34355566777777777777553
No 455
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=49.41 E-value=12 Score=25.22 Aligned_cols=13 Identities=23% Similarity=0.095 Sum_probs=5.6
Q ss_pred eeeehhhhhhHHH
Q 046438 564 VVILLGVALPLSA 576 (851)
Q Consensus 564 ~~~~~~~~~~~~~ 576 (851)
..|..++..++++
T Consensus 11 ~~IA~gVVgGv~~ 23 (44)
T 2ks1_B 11 PSIATGMVGALLL 23 (44)
T ss_dssp SSSTHHHHHHHHH
T ss_pred ceEEeehhHHHHH
Confidence 3444444443433
No 456
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=41.51 E-value=14 Score=26.10 Aligned_cols=20 Identities=10% Similarity=0.306 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHhheeeeeec
Q 046438 576 AAFIIISILAFKFGLISTCR 595 (851)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~ 595 (851)
..+.++.++.|+++..++.+
T Consensus 21 LLL~Lii~~LwK~GFFKR~~ 40 (54)
T 2l8s_A 21 LLLMLLILALWKIGFFKRPL 40 (54)
T ss_dssp HHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHcCcccCCC
Confidence 34444555667666655444
No 457
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=40.39 E-value=13 Score=26.40 Aligned_cols=21 Identities=19% Similarity=0.388 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHhheeeeeecc
Q 046438 576 AAFIIISILAFKFGLISTCRK 596 (851)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~ 596 (851)
..+.++.++.|+++..++.++
T Consensus 24 llL~li~~~LwK~GFFkR~~~ 44 (54)
T 2knc_A 24 LLLTILVLAMWKVGFFKRNRP 44 (54)
T ss_dssp HHHHHHHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHHHcCcccCCCC
Confidence 344445556676666554443
No 458
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=33.28 E-value=19 Score=24.30 Aligned_cols=7 Identities=43% Similarity=0.306 Sum_probs=2.7
Q ss_pred eehhhhh
Q 046438 566 ILLGVAL 572 (851)
Q Consensus 566 ~~~~~~~ 572 (851)
|..++..
T Consensus 12 IA~gVVg 18 (44)
T 2l2t_A 12 IAAGVIG 18 (44)
T ss_dssp HHHHHHH
T ss_pred EEEeehH
Confidence 4334333
No 459
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=32.46 E-value=1.4e+02 Score=35.69 Aligned_cols=26 Identities=27% Similarity=0.175 Sum_probs=23.6
Q ss_pred cCCCCCCEEECCCCcEEEeeccCccc
Q 046438 750 CDIKPSNVLLDEDMVARLGDFGIAKL 775 (851)
Q Consensus 750 ~Dl~~~Nill~~~~~~kl~Dfg~a~~ 775 (851)
||=+++|||++.+|.+.=+|||.+..
T Consensus 937 gDRH~~NILid~tG~v~HIDFG~~f~ 962 (1091)
T 3hhm_A 937 GDRHNSNIMVKDDGQLFHIDFGHFLD 962 (1091)
T ss_dssp CCCCTTTEEEETTSCEEECCCCCCSC
T ss_pred cCCCCcceEEeCCCCEEEEeehhhhc
Confidence 68899999999999999999998853
No 460
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=30.53 E-value=34 Score=25.29 Aligned_cols=25 Identities=16% Similarity=0.029 Sum_probs=13.3
Q ss_pred hhhhhhHHHHHHHHHHHHHhheeee
Q 046438 568 LGVALPLSAAFIIISILAFKFGLIS 592 (851)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (851)
+.+.+.+.+++.++.+.||++.+.+
T Consensus 17 v~viliavaalg~li~gcwcylrlq 41 (90)
T 1zza_A 17 VIVILIAIAALGALILGCWCYLRLQ 41 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSSC
T ss_pred ehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455566666667654443
No 461
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=24.39 E-value=40 Score=22.47 Aligned_cols=17 Identities=18% Similarity=0.458 Sum_probs=9.2
Q ss_pred HHHHHHHHHHhheeeee
Q 046438 577 AFIIISILAFKFGLIST 593 (851)
Q Consensus 577 ~~~~~~~~~~~~~~~~~ 593 (851)
...++.++.|+++..++
T Consensus 23 lL~li~~~LwK~GFFkR 39 (42)
T 2k1a_A 23 LLTILVLAMWKVGFFKR 39 (42)
T ss_dssp HHHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHHcCcccC
Confidence 34445556666665543
No 462
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=22.38 E-value=55 Score=21.27 Aligned_cols=12 Identities=17% Similarity=0.097 Sum_probs=4.8
Q ss_pred hhhhhhHHHHHH
Q 046438 568 LGVALPLSAAFI 579 (851)
Q Consensus 568 ~~~~~~~~~~~~ 579 (851)
.++++++.+.+.
T Consensus 14 AGiVvG~v~gv~ 25 (38)
T 2k1k_A 14 VAVIFGLLLGAA 25 (38)
T ss_dssp HHHHHHHHHHHH
T ss_pred eeeehHHHHHHH
Confidence 344444443333
Done!