BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046440
(284 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2V3B2|CCD51_ARATH Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2
Length = 323
Score = 117 bits (294), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 159/321 (49%), Gaps = 46/321 (14%)
Query: 5 DSLSGLLCPESKTCLDEDS-AVLDVEDEDE--YVNTLGDKEISFGFKRGETDKSVMLSDD 61
DSL+ LC ES++ L+ED ++ D+ E + T+ D++ E + L
Sbjct: 6 DSLALFLCHESESSLNEDDDETIERSDKQEPHFTTTIDDEDYVADLVLKENLRFETLPSK 65
Query: 62 IKCA--RLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFI--DSDKLWAIKLLSVA 117
+ RL AI WIL TR FGF+ +TAY++++Y D FL RFI D+ WA++LLSVA
Sbjct: 66 TTSSSDRLIAIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETWAMRLLSVA 125
Query: 118 CVSVAAKMEE-----CNSENGAH---------------VINNNGLENGINHSISFLHHFI 157
C+S+AAKMEE + H +++ + + + ++F+
Sbjct: 126 CLSLAAKMEERIVPGLSQYPQDHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFL 185
Query: 158 RKFCKDS---SPSNVLPRTVALILAIMREINLMEHRPSAIAVA-----ATLVAFDQKLTR 209
K +D+ S VL R+ +LA+ +EI+ E+R +A ++ + D +LTR
Sbjct: 186 AKISQDNHSVSKDLVLLRSSDSLLALTKEISFTEYRQFVVAAVTTLLASSSTSSDIRLTR 245
Query: 210 QALESCCGFL------EVGDVSTCYSIMQKLEMEKYKTPDPSATHFGTANVSSSAVSSKR 263
+ + + G + E +V CY ++E K+ TP P + ++ S +
Sbjct: 246 EEIANKFGSISWWTSNENENVYLCYQRTLEIEERKHMTPPP---EIAVSREPPASGSGAK 302
Query: 264 KRLTFNDSDQRSDGPNEKRLR 284
+RL+F+DSDQ S P KR+R
Sbjct: 303 RRLSFDDSDQSS--PPAKRMR 321
>sp|Q10QA2|CCD53_ORYSJ Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1
Length = 345
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 115/222 (51%), Gaps = 33/222 (14%)
Query: 62 IKCARLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSV 121
+K AR + WI+ T A F F KTAY++VTYLDRFL+ R +D DK WA++LLSVAC+S+
Sbjct: 96 MKNARAWCVGWIVKTNAGFRFSLKTAYVAVTYLDRFLARRCVDRDKEWALQLLSVACLSL 155
Query: 122 AAKMEE---------------CNSENGAHVINNNGLENGI--NHSISFLHHFIRKFCKDS 164
AAK+EE C S ++ L+ + S+L+ F KF D
Sbjct: 156 AAKVEERRPPRLPEFKLDMYDCASLMRMELLVLTTLKWQMITETPFSYLNCFTAKFRHDE 215
Query: 165 SPSNVLPRTVALILAIMREINLMEHRPSAIAVAATLVAFDQKLT------RQALESCCGF 218
+ VL R + I A ++ I+ + ++PS IA+AA L+A +++ + + S
Sbjct: 216 RKAIVL-RAIECIFASIKVISSVGYQPSTIALAAILIARNKETAPNLDELKSVVGSLWQQ 274
Query: 219 LEVGDVSTCYSIMQKLEMEKYKTPDPSATHFGTANVSSSAVS 260
L+ G V +CY+ M E ++ T V+SS VS
Sbjct: 275 LDTGHVYSCYNKMMIQEDRSMQS---------TTEVASSGVS 307
>sp|Q0J233|CCD21_ORYSJ Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2
Length = 308
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 122/271 (45%), Gaps = 50/271 (18%)
Query: 4 DDSLSGLLCPES------------KTCLDEDSAVLDVEDEDEY----VNTLGDKEISFGF 47
DD S LLC E TC ED V E+ Y + L E +
Sbjct: 5 DDDASYLLCAEDAGAAVFDVAVDISTCTTEDDECCSVGGEELYSAASIAELIGGEAEYSP 64
Query: 48 KRGETDKSVMLSDDIKCARLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDK 107
+ D+ S D AR E+++WIL + GF P TAYL+V Y+DRFLS R + +
Sbjct: 65 RSDYPDRLRSRSID-PAARAESVSWILKVQEYNGFLPLTAYLAVNYMDRFLSLRHLPEGQ 123
Query: 108 LWAIKLLSVACVSVAAKMEEC--------NSENGAHVINNNG---LENGINHSISFLHHF 156
WA++LL+VAC+S+AAKMEE E +V +E I ++++
Sbjct: 124 GWAMQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPRTICRMEFLILTALNWRLRS 183
Query: 157 IRKF-------CKDSSPSNVLPRTVALILAIMREINLMEHRPSAIAVAATLVAFDQKLT- 208
+ F CK S A++ +I ++H PS++A AA L A + +
Sbjct: 184 VTPFTFIDFFACKHISN--------AMVQNANSDIQFLDHCPSSMAAAAVLCATGETPSL 235
Query: 209 -----RQALESCCGFLEVGDVSTCYSIMQKL 234
A+ C G E G +S+CY +MQ+L
Sbjct: 236 AFVNPELAVNWCIGLAEEG-ISSCYQLMQQL 265
>sp|Q69QB8|CCD31_ORYSJ Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2
Length = 342
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 126/267 (47%), Gaps = 52/267 (19%)
Query: 18 CLDEDSAVLDVEDEDEYVN-------TLGDKEISFGFK-------------------RGE 51
C ++++A+LD+ +E E ++ +LGD + F + G
Sbjct: 14 CAEDNTAILDLGEESEEISWVVGVDASLGDLSMDFPLQSDDCIEALLGREEQQHIPMEGY 73
Query: 52 TDKSVMLSD--DIKCARLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLW 109
+ ++ D D+ R +AI WI ++ F P TA LSV YLDRFLS + ++
Sbjct: 74 LQRLLLQPDGLDLVAVRSDAIDWIWKVHELYKFGPLTAVLSVNYLDRFLSVFDLPQEEAC 133
Query: 110 AIKLLSVACVSVAAKMEE-----------CNSENGAHVINNNGLENGINHSI-------- 150
+LL+VA +S+AAKMEE C+++ +E + +++
Sbjct: 134 MTQLLAVASLSLAAKMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVLNALKWRMQAVT 193
Query: 151 --SFLHHFIRKFCKDSSPS-NVLPRTVALILAIMREINLMEHRPSAIAVAATLVAFDQKL 207
SF+ +++ KF D +PS + L R+V LIL+ + + RPS IA + LVA ++
Sbjct: 194 ACSFIDYYLHKFNDDDTPSTSALSRSVDLILSTCKVAEFLVFRPSEIAASVALVALEEHE 253
Query: 208 TR--QALESCCGFLEVGDVSTCYSIMQ 232
T + + +C L+ V CY ++Q
Sbjct: 254 TSMFERVATCYKNLKKERVLRCYEMIQ 280
>sp|P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3
Length = 339
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 29/209 (13%)
Query: 65 ARLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAK 124
AR +++AWIL +A + F+P TAYL+V Y+DRFL R + W ++LL+VAC+S+AAK
Sbjct: 81 AREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAK 140
Query: 125 MEEC--------NSENGAHVINNNGLENGINHSISFL---------HHFIRKFCKDSSPS 167
MEE ++ ++ +S L FI F PS
Sbjct: 141 MEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPS 200
Query: 168 NV-----LPRTVALILAIMREINLMEHRPSAIAVAATLVAFDQKLT-------RQALESC 215
+ +IL+ ++E + +E+ PS+IA AA L ++ + ++ E+
Sbjct: 201 GTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANELPSLSSVVNPHESPETW 260
Query: 216 CGFLEVGDVSTCYSIMQKLEMEKYKTPDP 244
C L + CY +M+ + +E + P
Sbjct: 261 CDGLSKEKIVRCYRLMKAMAIENNRLNTP 289
>sp|Q2QMW1|CCD52_ORYSJ Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1
Length = 365
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 96/208 (46%), Gaps = 42/208 (20%)
Query: 65 ARLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKL-WAIKLLSVACVSVAA 123
ARL A+ WIL TR FGF +TAYL++ Y DRF R +D + + WA +LLS+ACVSVAA
Sbjct: 99 ARLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRVDREAMPWAARLLSIACVSVAA 158
Query: 124 KMEECNSE-------NGAH-------------VINNNGLENGINHSISFLHHFIRKF--- 160
KMEE S G V++ G G FL F +
Sbjct: 159 KMEEYQSPALSEFDAGGGRVFCSDSIRRMELLVLSTLGWRMGAVTPFDFLPCFSSRLHRH 218
Query: 161 ---------CKDSSPSNVLPRTVALILAIMREINLMEHRPSAI-AVAATLVAFDQKLTRQ 210
++ + V V I A +++++RPS + A A ++ LT++
Sbjct: 219 HHGGAGAAGHGAAAAARVALNAVGFIFATAEAGSVLDYRPSTVAAAAILAASYGAPLTKE 278
Query: 211 ALES-------CCGFLEVGDVSTCYSIM 231
ALES C ++ +V CYS+M
Sbjct: 279 ALESKMSNLSPSC-LIDKENVHACYSMM 305
>sp|Q67V81|CCD11_ORYSJ Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1
Length = 363
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 34/198 (17%)
Query: 68 EAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEE 127
E+++WIL R+V GF+P TAYL+V+Y+DRF+S+R + D WA +LL VAC+S+AAKMEE
Sbjct: 127 ESVSWILKVRSVHGFQPATAYLAVSYMDRFMSSRSL-PDHGWASQLLCVACLSLAAKMEE 185
Query: 128 CNSE-------NGAHVINNNGLENGIN--------------HSISFLHHFIRKFCKDSSP 166
++ G I + +F+ F K
Sbjct: 186 SSAPPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKVGSSGRS 245
Query: 167 SNVLP-RTVALILAIMREINLMEHRPSAIAVAATLVAFDQKLTRQALES----------C 215
S +L R +IL+ + E+ + H S++A AA L A ++ + S C
Sbjct: 246 SRILALRACQIILSAIHELEFLNHCASSMAAAAVLFAVNESPAAMSHRSSVSSESAASWC 305
Query: 216 CGFLEVGDVSTCYSIMQK 233
G E +S+CY ++Q+
Sbjct: 306 IGLTE-ERISSCYQLLQR 322
>sp|Q0DQA9|CCD51_ORYSJ Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2
Length = 367
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 101/212 (47%), Gaps = 30/212 (14%)
Query: 50 GETDKSVMLSDDIKCARLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKL- 108
GE+ + D AR + WIL TR FGF +TAYL++ Y DRF R ID +
Sbjct: 93 GESAAAAAPMDWFALARRATVKWILETRGCFGFCHRTAYLAIAYFDRFCLRRCIDRSVMP 152
Query: 109 WAIKLLSVACVSVAAKMEECNSENGAHV---INNNGLENG----------INHSISFLHH 155
WA +LL+VACVS+AAKMEE + + + ++G E + ++ +
Sbjct: 153 WAARLLAVACVSLAAKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMA 212
Query: 156 FIRKFCKDSSPSNVLPRTV----------ALILAIMREINLMEHRPSAIAVAATLVAFDQ 205
+ F S+ L R V ALI + ++++HRPS +A AA L A
Sbjct: 213 AVTPFDYLPCLSSRLRRHVGGGGGAGASAALIFSAAEAASVLDHRPSTVAAAAVLAATHG 272
Query: 206 KLTRQALESCCG------FLEVGDVSTCYSIM 231
LTR+ALES L+ DV CYS M
Sbjct: 273 ALTREALESKMSGLSPSFLLDKEDVFACYSAM 304
>sp|P42753|CCD31_ARATH Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3
Length = 376
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 34/235 (14%)
Query: 31 EDEYVNTLGDKEISFGFKRGETDKSVMLSDDIKCARLEAIAWILNTRAVFGFRPKTAYLS 90
EDE + TL KE G + V LS D R EA+ WIL A +GF A L+
Sbjct: 59 EDEDLVTLFSKEEEQGLSCLD---DVYLSTD----RKEAVGWILRVNAHYGFSTLAAVLA 111
Query: 91 VTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEEC--------NSENGAHVINNNGL 142
+TYLD+F+ + + DK W ++L+SVAC+S+AAK+EE E +V +
Sbjct: 112 ITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTI 171
Query: 143 EN-------------GINHSISFLHHFIRKF-CKDSSPSNVLPRTVALILAIMREINLME 188
+ + ISF+ H IR+ K+++ + L + L+L+++ + +
Sbjct: 172 QRMELLILSTLEWKMHLITPISFVDHIIRRLGLKNNAHWDFLNKCHRLLLSVISDSRFVG 231
Query: 189 HRPSAIAVAATLVAFDQKLTRQALESCCGFLEVGD-----VSTCYSIMQKLEMEK 238
+ PS +A A + +Q L L V + V TCY ++ +L +++
Sbjct: 232 YLPSVVAAATMMRIIEQVDPFDPLSYQTNLLGVLNLTKEKVKTCYDLILQLPVDR 286
>sp|Q8H339|CCD12_ORYSJ Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2
Length = 354
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 33/200 (16%)
Query: 65 ARLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAK 124
AR +++AWIL R ++G P TAYL+V+Y+DRFLS + + WA++LL+V C+S+AAK
Sbjct: 115 ARADSVAWILKVRELYGMLPVTAYLAVSYMDRFLSLHRLPGNG-WAMQLLAVTCLSLAAK 173
Query: 125 MEE--------CNSENGAHVINN-----------NGLENGINHSISFLHHFIRKFCKDSS 165
MEE E+ ++ + + L+ + F F+ F
Sbjct: 174 MEETLVPSILDLQMEDARYIFEHRTIFRMELLVLDALDWRLRSITPFT--FMYLFADKVD 231
Query: 166 PSN-----VLPRTVALILAIMREINLMEHRPSAIAVAATLVAFDQKLTRQALE--SCCGF 218
P+ ++ + + LA + + ++H PS+IA AA L A + + +++ + +
Sbjct: 232 PNGKHIRELIHQATQVTLATIHDTEFLDHCPSSIAAAAVLCASSEIMQLVSIDHGTLVSW 291
Query: 219 LEVG----DVSTCYSIMQKL 234
+G + CY +MQ+L
Sbjct: 292 RIIGLDEEAIIRCYRLMQQL 311
>sp|Q4KYM5|CCD42_ORYSJ Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2
Length = 383
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 66 RLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKM 125
R EAI WI + F TAYL+V YLDRFLS + + W +LLSVAC+S+AAKM
Sbjct: 110 RSEAIGWIWEVYTYYNFSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKM 169
Query: 126 EEC------NSENGAH---------------VINNNGLENGINHSISFLHHFIRKF-CKD 163
EE + + G V+ N S++ +F+RK +
Sbjct: 170 EETVVPQCLDLQIGEPRFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGN 229
Query: 164 SSPSNVLPRTVALILAIMREINLMEHRPSAI 194
++P + L R+ LIL I +E RPS I
Sbjct: 230 AAPRSWLLRSSELILRIAAGTGFLEFRPSEI 260
>sp|Q8LGA1|CCD41_ARATH Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2
Length = 308
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 23/163 (14%)
Query: 61 DIKCARLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVS 120
D+ R +A+ WI V F P L++ YLDRFLS + S K W ++LL+VAC+S
Sbjct: 73 DLNVGRRDALNWIWKACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLS 132
Query: 121 VAAKME-------------------ECNSENGAHVINNNGLENGINH--SISFLHHFIRK 159
+AAK+E E S ++ N L+ + S++ +F+RK
Sbjct: 133 LAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRK 192
Query: 160 FCK-DSSPSNVL-PRTVALILAIMREINLMEHRPSAIAVAATL 200
K D PSN L R++ +I + + I+ +E RPS +A A L
Sbjct: 193 MSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVAL 235
>sp|Q8LHA8|CCD22_ORYSJ Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1
Length = 356
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 25/188 (13%)
Query: 30 DEDEYVNTLGDKEISFGFKRGETDKSVMLSDDIKCA-RLEAIAWILNTRAVFGFRPKTAY 88
D DE+V L +KE+ +RG +K + ++C+ R +AI WI + + F P + Y
Sbjct: 60 DSDEFVALLVEKEMDHQPQRGYLEKLEL--GGLECSWRKDAIDWICKVHSYYNFGPLSLY 117
Query: 89 LSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEEC-----------NSENGAHVI 137
L+V YLDRFLS+ + D+ W +LLSV+C+S+A KMEE ++E
Sbjct: 118 LAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEAR 177
Query: 138 NNNGLENGINHSI----------SFLHHFIRKFCKDSSPSNVLPRTVA-LILAIMREINL 186
+ +E + ++ SF+ +F+ KF + PS L + L + +++
Sbjct: 178 HIKRMELIVMKTLKWRLQAVTPFSFIGYFLDKFNEGKPPSYTLASWCSDLTVGTLKDSRF 237
Query: 187 MEHRPSAI 194
+ RPS I
Sbjct: 238 LSFRPSEI 245
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3
PE=3 SV=1
Length = 405
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 28/199 (14%)
Query: 66 RLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLST-RF-IDSDKLWAIKLLSVACVSVAA 123
R+ AI WI +A + F P AYL+V YLDRFLS+ F + +D W +LL VAC+S+AA
Sbjct: 104 RIAAIDWICKVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAA 163
Query: 124 KMEE-----------CNSE--------NGAHVINNNGLENGINH--SISFLHHFIRKFCK 162
KMEE CN E + +I L+ + +++ HF+ K +
Sbjct: 164 KMEETAAPGTLDLQVCNPEYVFDAETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINE 223
Query: 163 DSS-PSNVLPRTVALILAIMREINLMEHRPSAI--AVAATLVAFDQKLT--RQALESCCG 217
+ S ++ R +IL+ M+ + RPS I AVA ++VA ++ LES
Sbjct: 224 GNRITSELISRCTEIILSTMKATVFLRFRPSEIATAVALSVVADGGRVLDFGGVLESSKL 283
Query: 218 FLEVGDVSTCYSIMQKLEM 236
++ +V C+ MQ++ +
Sbjct: 284 PVDKDNVGRCHQAMQEMAL 302
>sp|Q9SN11|CCD33_ARATH Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1
Length = 361
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 66 RLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKM 125
R +A+ WI ++ +GF TA L+V Y DRF+++R +DK W +L ++AC+S+AAK+
Sbjct: 86 REKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKV 145
Query: 126 EEC--------NSENGAHVINNNGLE----------NGINH---SISFLHHFIRKFC-KD 163
EE E +V ++ + H ISF H IR++ K
Sbjct: 146 EEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVTPISFFDHIIRRYSFKS 205
Query: 164 SSPSNVLPRTVALILAIMREINLMEHRPSAIAVAATL-VAFDQKLTRQAL--ESCCGFLE 220
L R +L+L+I+ + + PS +A A + V D K+ +A+ L+
Sbjct: 206 HHQLEFLSRCESLLLSIIPDSRFLSFSPSVLATAIMVSVIRDLKMCDEAVYQSQLMTLLK 265
Query: 221 VGD--VSTCYSIM 231
V V+ CY ++
Sbjct: 266 VDSEKVNKCYELV 278
>sp|Q9FGQ7|CCD32_ARATH Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=2 SV=1
Length = 367
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 22/162 (13%)
Query: 66 RLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKM 125
R EA+ W+L ++ +GF TA L+V Y DRF+++ + +DK W +L++VA +S+AAK+
Sbjct: 96 RKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKV 155
Query: 126 EEC--------NSENGAHVINNNGLE----------NGINH---SISFLHHFIRKF-CKD 163
EE E ++ ++ H ISF H IR+F K
Sbjct: 156 EEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQWRMHPVTPISFFDHIIRRFGSKW 215
Query: 164 SSPSNVLPRTVALILAIMREINLMEHRPSAIAVAATLVAFDQ 205
+ + L+++++ + M + PS +A A ++ F++
Sbjct: 216 HQQLDFCRKCERLLISVIADTRFMRYFPSVLATAIMILVFEE 257
>sp|Q6YXH8|CCD41_ORYSJ Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2
Length = 356
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 86/205 (41%), Gaps = 34/205 (16%)
Query: 66 RLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKM 125
R++AI WI + + F P TA L+V YLDRFLS + K W +LL+VAC+S+AAKM
Sbjct: 103 RMDAIDWIWKVHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKM 162
Query: 126 EECNSENGAH---------------------VINNNGLENGINHSISFLHHFIRKFCKDS 164
EE + V++ S++ +F+R+
Sbjct: 163 EETDVPQSLDLQVGEERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGD 222
Query: 165 SPSNVLPRTV----ALILAIMREINLMEHRPSAIAVAATLVAFDQKLTRQALESCCGFLE 220
PS R+ LIL I R + RPS IA A ++ + +
Sbjct: 223 PPSG---RSALLSSELILCIARGTECLGFRPSEIAAAVAAAVVGEE------HAAFSHVN 273
Query: 221 VGDVSTCYSIMQKLEMEKYKTPDPS 245
+S C ++Q +E+ K PS
Sbjct: 274 KERMSHCQEVIQAMELIHPKPSSPS 298
>sp|Q0WQN9|CCD42_ARATH Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2
Length = 298
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 23/159 (14%)
Query: 65 ARLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAK 124
R++A+ WI F P L++ YLDRFLS + S K W ++LL+VAC+S+AAK
Sbjct: 68 VRIQALGWIWKACEELQFGPLCICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAK 127
Query: 125 MEECNS------ENGAH---------------VINNNGLENGINHSISFLHHFIRKF-CK 162
+EE N + GA V+N S++ +F+ K
Sbjct: 128 IEETNVPELMQLQVGAPMFVFEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGY 187
Query: 163 DSSP-SNVLPRTVALILAIMREINLMEHRPSAIAVAATL 200
D P S ++ R++ +I + + I+ +E R S IA A L
Sbjct: 188 DQEPHSRLVTRSLQVIASTTKGIDFLEFRASEIAAAVAL 226
>sp|P42752|CCD21_ARATH Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3
Length = 361
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 23/158 (14%)
Query: 57 MLSDDIKCA-RLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLS 115
+LS D+ + R +A+ WIL A + F LS+ YLDRFL++ + DK WA +LL+
Sbjct: 87 LLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLA 146
Query: 116 VACVSVAAKMEECN--------SENGAHVINNNGLE-------NGINHSI------SFLH 154
V+C+S+A+KMEE + E+ V ++ +N + SF+
Sbjct: 147 VSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFID 206
Query: 155 HFIRKFCKDSSPSNVLPRTVALILAIMREINLMEHRPS 192
+F+ K S N++ R+ IL + I ++ RPS
Sbjct: 207 YFVDKISGHVS-ENLIYRSSRFILNTTKAIEFLDFRPS 243
>sp|Q9ZR04|CCD61_ARATH Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1
Length = 302
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 44/186 (23%)
Query: 84 PKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEECNSENG---------- 133
P YL+V YLDRFLS+ + K W +KL+S++CVS++AKM + +
Sbjct: 75 PSLTYLAVNYLDRFLSSEDMPQSKPWILKLISLSCVSLSAKMRKPDMSVSDLPVEGEFFD 134
Query: 134 AHVINNNGLENGINHSI----------SFLHHFIRKF-CKDSSP----SNVLPRTVALIL 178
A +I +EN I ++ SFL FI F K+ P ++ +T L
Sbjct: 135 AQMIER--MENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLLLKHSLKSQTSDLTF 192
Query: 179 AIMREINLMEHRPSAIAVAATLVA-----------FDQKLTRQALESCCGFLEVGDVSTC 227
++ +I+ +E +PS IA AA L A F ++ + C ++ ++ C
Sbjct: 193 SLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFSNRINQ------CTYVNKDELMEC 246
Query: 228 YSIMQK 233
Y +Q+
Sbjct: 247 YKAIQE 252
>sp|Q2QQ96|CCA21_ORYSJ Cyclin-A2-1 OS=Oryza sativa subsp. japonica GN=CYCA2-1 PE=2 SV=1
Length = 490
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 30/192 (15%)
Query: 34 YVNTLGDKEISFGFKRGETDKSVMLSDDI-KCARLEAIAWILNTRAVFGFRPKTAYLSVT 92
Y N + + I +R ++ L DI K R I W++ + P T YL++
Sbjct: 232 YTNLMASELI----RRPRSNYMEALQRDITKGMRGILIDWLVEVSEEYKLVPDTLYLTIN 287
Query: 93 YLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEEC-------------NSENGAHVINN 139
+DRFLS +I+ KL +LL + + +A+K EE N+ A V+
Sbjct: 288 LIDRFLSQHYIERQKL---QLLGITSMLIASKYEEICAPRVEEFCFITDNTYTKAEVLKM 344
Query: 140 NGL---ENGINHSISFLHHFIRKFCKDSSPSNVLPR-TVALILAIMREINLMEHR----- 190
GL + G + S+ F+R+F + + S +P T+ + + E+ L+++
Sbjct: 345 EGLVLNDMGFHLSVPTTKTFLRRFLRAAQASRNVPSITLGYLANYLAELTLIDYSFLKFL 404
Query: 191 PSAIAVAATLVA 202
PS +A +A +A
Sbjct: 405 PSVVAASAVFLA 416
>sp|Q9C6Y3|CCA11_ARATH Cyclin-A1-1 OS=Arabidopsis thaliana GN=CYCA1-1 PE=1 SV=1
Length = 460
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 26/178 (14%)
Query: 48 KRGETDKSVMLSDDIKCA-RLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSD 106
KR + D + D+ + R + W++ + P+T YL+V Y+DR+LS I
Sbjct: 209 KRPDVDYMERVQKDVNSSMRGILVDWLIEVSEEYRLVPETLYLTVNYIDRYLSGNVISRQ 268
Query: 107 KLWAIKLLSVACVSVAAKMEEC---NSENGAHVINNNGLENGI----NHSISFLHH---- 155
KL +LL VAC+ +AAK EE E ++ +N L++ + + +++L
Sbjct: 269 KL---QLLGVACMMIAAKYEEICAPQVEEFCYITDNTYLKDEVLDMESDVLNYLKFEMTA 325
Query: 156 -----FIRKFCKDSSPSNVLPRTVALILA-IMREINLME-----HRPSAIAVAATLVA 202
F+R+F + + + P +A + E++L+E H PS +A +A +A
Sbjct: 326 PTTKCFLRRFVRAAHGVHEAPLMQLECMANYIAELSLLEYTMLSHSPSLVAASAIFLA 383
>sp|Q0JPA4|CCA12_ORYSJ Cyclin-A1-2 OS=Oryza sativa subsp. japonica GN=CYCA1-2 PE=3 SV=2
Length = 477
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 48 KRGETDKSVMLSDDIKCA-RLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSD 106
KR TD + D+ + R I W++ + P T YL+V Y+DR+LS I+
Sbjct: 225 KRPSTDFMETIQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQ 284
Query: 107 KLWAIKLLSVACVSVAAKMEEC---NSENGAHVINNNGLENGI-NHSISFLHH------- 155
+L +LL VAC+ +AAK EE E ++ +N + + S L++
Sbjct: 285 RL---QLLGVACMLIAAKYEEICAPQVEEFCYITDNTYFRDEVLEMEASVLNYLKFEVTA 341
Query: 156 -----FIRKFCKDSSPSNVLPRTVALILA------IMREINLMEHRPSAIAVAATLVA 202
F+R+F + + S+ P LA + E NL+ + PS +A +A +A
Sbjct: 342 PTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELSLLEYNLLSYPPSLVAASAIFLA 399
>sp|Q7F830|CCA11_ORYSJ Cyclin-A1-1 OS=Oryza sativa subsp. japonica GN=CYCA1-1 PE=2 SV=1
Length = 508
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 48 KRGETDKSVMLSDDIKCA-RLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSD 106
KR TD + D+ + R I W++ + P T YL+V Y+DR+LS I+
Sbjct: 255 KRPSTDFMETIQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQ 314
Query: 107 KLWAIKLLSVACVSVAAKMEEC---NSENGAHVINNNGLENGI-NHSISFLHH------- 155
+L +LL VAC+ +AAK EE E ++ +N + + S L++
Sbjct: 315 RL---QLLGVACMLIAAKYEEICAPQVEEFCYITDNTYFRDEVLEMEASVLNYLKFEVTA 371
Query: 156 -----FIRKFCKDSSPSNVLPRTVALILA------IMREINLMEHRPSAIAVAATLVA 202
F+R+F + + S+ P LA + E NL+ + PS +A +A +A
Sbjct: 372 PTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELSLLEYNLLSYPPSLVAASAIFLA 429
>sp|Q9LZM0|CCD71_ARATH Putative cyclin-D7-1 OS=Arabidopsis thaliana GN=CYCD7-1 PE=3 SV=1
Length = 341
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 98/231 (42%), Gaps = 35/231 (15%)
Query: 3 HDDSLSGLLCPESKTCLDEDSAVLDVEDEDEYVNTLGDKEISFGFKRGETDKSVMLSDDI 62
HD+ + + PE E++ +D+E E + N GDK + F + TD
Sbjct: 28 HDNDVVKMY-PEIDAATMEEAIAMDLEKELCF-NNHGDKFVEFFVSKKLTD--------- 76
Query: 63 KCARLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVA 122
R A W++ TR+ +T + + DRF+ D W ++L++V +S+A
Sbjct: 77 --YRFHAFQWLIQTRSRLNLSYETVFSAANCFDRFVYMTCCDEWTNWMVELVAVTSLSIA 134
Query: 123 AKMEECNS--------ENGAHVINNN-----------GLENGIN--HSISFLHHFIRKFC 161
+K E + E H+ + N LE +N S +F + K
Sbjct: 135 SKFNEVTTPLLEELEMEGLTHMFHVNTVAQMELIILKALEWRVNAVTSYTFSQTLVSKIG 194
Query: 162 KDSSPSNVLPRTVALILAIMREINLMEHRPSAIAVAATLVAFDQKLTRQAL 212
++ R +L ++ ++ ++++ PS +A AA + + K+ R+++
Sbjct: 195 M-VGDHMIMNRITNHLLDVICDLKMLQYPPSVVATAAIWILMEDKVCRESI 244
>sp|Q9FVX0|CCA12_ARATH Cyclin-A1-2 OS=Arabidopsis thaliana GN=CYCA1-2 PE=1 SV=2
Length = 442
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 25/155 (16%)
Query: 70 IAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEEC- 128
I W++ + P+T YL+V Y+DR+L+ I+ L +LL V C+ +AAK EE
Sbjct: 216 IDWLVEVAEEYRLSPETLYLAVNYVDRYLTGNAINKQNL---QLLGVTCMMIAAKYEEVC 272
Query: 129 --NSENGAHVINNNGLENGI----NHSISFLHH---------FIRKFCKDSSPSNVLPRT 173
E+ ++ +N L N + + +++L F+R+F + + +P
Sbjct: 273 VPQVEDFCYITDNTYLRNELLEMESSVLNYLKFELTTPTAKCFLRRFLRAAQGRKEVPSL 332
Query: 174 VALILA-IMREINLME-----HRPSAIAVAATLVA 202
++ LA + E++L++ + PS +A +A +A
Sbjct: 333 LSECLACYLTELSLLDYAMLRYAPSLVAASAVFLA 367
>sp|Q0DJR9|CCA14_ORYSJ Cyclin-A1-4 OS=Oryza sativa subsp. japonica GN=CYCA1-4 PE=2 SV=2
Length = 356
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 30/214 (14%)
Query: 48 KRGETDKSVMLSDDIKCA-RLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSD 106
KR TD + +I + R I W++ + P+T YL+V Y+DR+LS++ I+
Sbjct: 99 KRPSTDFVETIQKNIDTSMRAVLIDWLVEVTEEYRLVPETLYLTVNYIDRYLSSKVINRR 158
Query: 107 KLWAIKLLSVACVSVAAKMEEC---NSENGAHVINNNGLENGI-NHSISFLHH------- 155
K+ +LL VAC+ +A+K EE E ++ +N ++ + S L +
Sbjct: 159 KM---QLLGVACLLIASKYEEICPPQVEELCYISDNTYTKDEVLKMEASVLKYLKFEMTA 215
Query: 156 -----FIRKFCKDSSPSNVLPRTVALILA-IMREINLMEHR-----PSAIAVAATLVA-F 203
F+R+F + + + P LA + E++L+E+ PS IA ++ +A F
Sbjct: 216 PTTKCFLRRFLRAAQVCHEAPVLHLEFLANYIAELSLLEYSLICYVPSLIAASSIFLAKF 275
Query: 204 DQKLTRQALESCCGF---LEVGDVSTCYSIMQKL 234
K T S F + D+ C + +L
Sbjct: 276 ILKPTENPWNSTLSFYTQYKPSDLCNCAKGLHRL 309
>sp|Q69S43|CCD61_ORYSJ Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1
Length = 320
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 30/178 (16%)
Query: 84 PKTAYLSVTYLDRFLSTRFIDSDK-LWAIKLLSVACVSVAAKMEECNSENGAHVINN--- 139
P+ AYL++ Y+DR+LS R + ++ WA +LL+++C+++AAKM+ + + A +
Sbjct: 76 PRVAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQRGEEF 135
Query: 140 ---------------NGLENGINH--SISFLHHFIRK-FCKDSSPS---NVLPRTVALIL 178
N LE ++FL F+ F + P+ + R V L+L
Sbjct: 136 MFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIKARAVDLLL 195
Query: 179 AIMREINLMEHRPSAIAVAATL-----VAFDQKLTRQALESCCGFLEVGDVSTCYSIM 231
+ E+ + E PS A AA L VA L +A + C F+ + C +M
Sbjct: 196 RVQPEVKMAEFSPSVAAAAALLAAAGEVAGAHLLGFEAGVAACPFVNSEKLRECGEVM 253
>sp|Q0INT0|CCA13_ORYSJ Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3 PE=2 SV=2
Length = 491
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 26/178 (14%)
Query: 48 KRGETDKSVMLSDDIKCA-RLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSD 106
K TD L D+ + R I W++ + P T YL+V Y+DR+LS I+
Sbjct: 238 KHPSTDFMETLQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQ 297
Query: 107 KLWAIKLLSVACVSVAAKMEECNS--------------------ENGAHVINNNGLENGI 146
+L +LL VAC+ +AAK +E + E A V+N E
Sbjct: 298 RL---QLLGVACMLIAAKYKEICAPQVEEFCYITDNTYFRDEVLEMEASVLNYLKFEMTA 354
Query: 147 NHSISFLHHFIR-KFCKDSSPSNVLPRTVALILAI-MREINLMEHRPSAIAVAATLVA 202
+ FL F+R D P+ L + + + E NL+ + PS +A +A +A
Sbjct: 355 PTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELSLLEYNLLSYPPSLVAASAIFLA 412
>sp|Q147G5|CCA22_ARATH Cyclin-A2-2 OS=Arabidopsis thaliana GN=CYCA2-2 PE=2 SV=1
Length = 436
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 25/155 (16%)
Query: 70 IAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEECN 129
I W++ + P T YL+V +DRFLS +I+ +L +LL V+C+ +A+K EE +
Sbjct: 210 IDWLVEVSDDYKLVPDTLYLTVNLIDRFLSNSYIERQRL---QLLGVSCMLIASKYEELS 266
Query: 130 S---ENGAHVINNNGLENGI----NHSISFLHH---------FIRKFCKDSSPSNVLPRT 173
+ E + N + ++F+H F+R+F K + S +P
Sbjct: 267 APGVEEFCFITANTYTRPEVLSMEIQILNFVHFRLSVPTTKTFLRRFIKAAQASYKVPFI 326
Query: 174 VALILA-IMREINLMEHR-----PSAIAVAATLVA 202
LA + E+ L+E+ PS IA +A +A
Sbjct: 327 ELEYLANYLAELTLVEYSFLRFLPSLIAASAVFLA 361
>sp|P24869|CG22_YEAST G2/mitotic-specific cyclin-2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLB2 PE=1 SV=1
Length = 491
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 70 IAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEECN 129
+ W++ FG P+T YL++ +DRFL + DKL +L+ +C+ +A+K EE
Sbjct: 265 VNWLVKIHNKFGLLPETLYLAINIMDRFLGKELVQLDKL---QLVGTSCLFIASKYEEVY 321
Query: 130 SENGAH 135
S + H
Sbjct: 322 SPSIKH 327
>sp|Q39071|CCA21_ARATH Cyclin-A2-1 OS=Arabidopsis thaliana GN=CYCA2-1 PE=2 SV=3
Length = 443
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 19 LDEDSAVLDVEDEDEYVNTLGDK-EISFGFKRGETDKSVMLSDDI-KCARLEAIAWILNT 76
+D DS V D + Y ++ D ++ +R T V + DI R I W++
Sbjct: 164 VDIDSGVQDPQFCSLYAASIYDSINVAELEQRPSTSYMVQVQRDIDPTMRGILIDWLVEV 223
Query: 77 RAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEECNS---ENG 133
+ T YL+V +DRF+S +I+ KL +LL + C+ +A+K EE ++ E
Sbjct: 224 SEEYKLVSDTLYLTVNLIDRFMSHNYIEKQKL---QLLGITCMLIASKYEEISAPRLEEF 280
Query: 134 AHVINNN-------GLENGINHSISF------LHHFIRKFCKDSSPSNVLPRTVALILA- 179
+ +N +E + +S+ F F+R+F + + S+ +P LA
Sbjct: 281 CFITDNTYTRLEVLSMEIKVLNSLHFRLSVPTTKTFLRRFIRAAQASDKVPLIEMEYLAN 340
Query: 180 -----IMREINLMEHRPSAIAVAATLVA 202
+ E + PS IA +A +A
Sbjct: 341 YFAELTLTEYTFLRFLPSLIAASAVFLA 368
>sp|P51986|CCNA_HYDVD G2/mitotic-specific cyclin-A (Fragment) OS=Hydra viridissima PE=2
SV=1
Length = 420
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 20 DEDSAVLDVEDEDEYV----NTLGDKEISFGFKRGETDKSVMLSDDIKCARLEAIAWILN 75
D DS + +V + EY N L E + K K ++ ++ I W++
Sbjct: 151 DIDSKLHEVFELPEYAQDIHNYLKKSEAKYRPKSNYMRKQTDINSSMRAI---LIDWLVE 207
Query: 76 TRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEE 127
+ P+T YLSV+Y+DRFLS + KL +L+ AC+ VAAK EE
Sbjct: 208 VSEEYKLIPQTLYLSVSYIDRFLSHMSVLRGKL---QLVGAACMLVAAKFEE 256
>sp|Q7XSJ6|CCB21_ORYSJ Cyclin-B2-1 OS=Oryza sativa subsp. japonica GN=CYCB2-1 PE=1 SV=2
Length = 420
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 47/248 (18%)
Query: 20 DEDSAVLDVEDED--------EYVNTLGDKEISFGFKRGETDKSVMLSD------DI-KC 64
DED +++D++ D EYV L + F R + S + D DI +
Sbjct: 132 DEDESMMDIDSADSGNPLAATEYVEEL------YKFYRENEEMSCVQPDYMSSQGDINEK 185
Query: 65 ARLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAK 124
R I W++ F +T +L+V +DRFL + + KL +L+ V + +A K
Sbjct: 186 MRAILIDWLIEVHHKFELMDETLFLTVNIVDRFLEKQVVPRKKL---QLVGVTAMLLACK 242
Query: 125 MEECNSE--NGAHVINNNGLENG--------------INHSISFLHHFIRKFCKDSSPSN 168
EE +I++ G N S+ + F+R+F K +
Sbjct: 243 YEEVAVPVVEDLVLISDRAYTKGQILEMEKLILNTLQFNMSVPTPYVFMRRFLKAAQSDK 302
Query: 169 VLPRTVALILAI-MREINLMEHRPSAIAVAATLVAFDQKLTRQALESCCGFLEVGDVSTC 227
L IL + + E ++++RPS +A AA A + AL C + + ++ +
Sbjct: 303 QLQLLSFFILELSLVEYQMLKYRPSLLAAAAVYTA------QCALTRCQQWTKTCELHSR 356
Query: 228 YSIMQKLE 235
Y+ Q LE
Sbjct: 357 YTGEQLLE 364
>sp|Q01J96|CCB21_ORYSI Cyclin-B2-1 OS=Oryza sativa subsp. indica GN=CYCB2-1 PE=1 SV=1
Length = 423
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 47/248 (18%)
Query: 20 DEDSAVLDVEDED--------EYVNTLGDKEISFGFKRGETDKSVMLSD------DI-KC 64
DED +++D++ D EYV L + F R + S + D DI +
Sbjct: 132 DEDESMMDIDSADSGNPLAATEYVEEL------YKFYRENEEMSCVQPDYMSSQGDINEK 185
Query: 65 ARLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAK 124
R I W++ F +T +L+V +DRFL + + KL +L+ V + +A K
Sbjct: 186 MRAILIDWLIEVHHKFELMDETLFLTVNIVDRFLEKQVVPRKKL---QLVGVTAMLLACK 242
Query: 125 MEECNSE--NGAHVINNNGLENG--------------INHSISFLHHFIRKFCKDSSPSN 168
EE +I++ G N S+ + F+R+F K +
Sbjct: 243 YEEVAVPVVEDLVLISDRAYTKGQILEMEKLILNTLQFNMSVPTPYVFMRRFLKAAQSDK 302
Query: 169 VLPRTVALILAI-MREINLMEHRPSAIAVAATLVAFDQKLTRQALESCCGFLEVGDVSTC 227
L IL + + E ++++RPS +A AA A + AL C + + ++ +
Sbjct: 303 QLQLLSFFILELSLVEYQMLKYRPSLLAAAAVYTA------QCALTRCQQWTKTCELHSR 356
Query: 228 YSIMQKLE 235
Y+ Q LE
Sbjct: 357 YTGEQLLE 364
>sp|O48790|CCB14_ARATH Cyclin-B1-4 OS=Arabidopsis thaliana GN=CYCB1-4 PE=2 SV=1
Length = 387
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 37/192 (19%)
Query: 70 IAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEE-- 127
I W+++ F P+T YL++ +DRFLS + +L +LL + + +A K EE
Sbjct: 166 IDWLVDVHRKFELMPETLYLTINLVDRFLSLTMVHRREL---QLLGLGAMLIACKYEEIW 222
Query: 128 --------CNSENGAHVINNNGLENGINHSISFL------HHFIRKFCKDSSPSNVLPRT 173
C S+N + +E I + + + F+ ++ K + P +
Sbjct: 223 APEVNDFVCISDNAYNRKQVLAMEKSILGQVEWYITVPTPYVFLARYVKAAVPCDAEMEK 282
Query: 174 VALILAIMREINLMEH------RPSAIAVAATLVAFDQKLTRQALESCCGFLEVGDVSTC 227
+ LA E+ LM++ RPS +A +A A RQ L+ + E T
Sbjct: 283 LVFYLA---ELGLMQYPIVVLNRPSMLAASAVYAA------RQILKKTPFWTETLKHHTG 333
Query: 228 YS---IMQKLEM 236
YS IM+ +M
Sbjct: 334 YSEDEIMEHAKM 345
>sp|A0MEB5|CCA33_ARATH Cyclin-A3-3 OS=Arabidopsis thaliana GN=CYCA3-3 PE=2 SV=2
Length = 327
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 91/196 (46%), Gaps = 31/196 (15%)
Query: 70 IAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEE-- 127
+ W++ F +T YL+V+Y+DRFLS + ++ W ++L+ V+ + +A+K EE
Sbjct: 96 VDWLVEVAEEFELVSETLYLTVSYIDRFLSLKMVNEH--W-LQLVGVSAMFIASKYEEKR 152
Query: 128 -CNSENGAHVINNN-------GLENGINHSISF------LHHFIRKFCKDSSPSNVLPR- 172
E+ ++ N +E I ++ F + F+R+F + + +P
Sbjct: 153 RPKVEDFCYITANTYTKQDVLKMEEDILLALEFELGRPTTNTFLRRFIRVAQEDFKVPNL 212
Query: 173 TVALILAIMREINLMEHR-----PSAIAVAATLVAF-----DQKLTRQALESCCGFLEVG 222
+ + + E++++++ PS +A +A +A +Q Q LE C + +
Sbjct: 213 QLEPLCCYLSELSMLDYSCVKFVPSLLAASAVFLARFIILPNQHPWSQMLEECTKY-KAA 271
Query: 223 DVSTCYSIMQKLEMEK 238
D+ C IM L + +
Sbjct: 272 DLQVCVEIMLDLYLSR 287
>sp|P24868|CG21_YEAST G2/mitotic-specific cyclin-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLB1 PE=1 SV=1
Length = 471
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 61 DIKCARLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVS 120
+IK R + WI+ FG P+T YL++ +DRFL + ++L +L+ +C+
Sbjct: 236 NIKQNRDILVNWIIKIHNKFGLLPETLYLAINIMDRFLCEEVVQLNRL---QLVGTSCLF 292
Query: 121 VAAKMEECNSENGAH 135
+A+K EE S + H
Sbjct: 293 IASKYEEIYSPSIKH 307
>sp|P25010|CCNAL_DAUCA G2/mitotic-specific cyclin C13-1 (Fragment) OS=Daucus carota PE=2
SV=1
Length = 341
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 49/238 (20%)
Query: 70 IAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEECN 129
+ W++ + P+T YL+++Y+DR+LS ++ KL +LL V+ +A+K EE
Sbjct: 114 VDWLVEVSLEYKLLPETLYLAISYVDRYLSVNVLNRQKL---QLLGVSSFLIASKYEEIK 170
Query: 130 SENGAHVINNN----------GLENGINHSISF---------LHHFIRKFCKDSSPSNVL 170
+N A ++ +E + ++ F FIR ++ +
Sbjct: 171 PKNVADFVDITDNTYSQQEVVKMEADLLKTLKFEMGSPTVKTFLGFIRAVQENPDVPKLK 230
Query: 171 PRTVALILAIMREINL--MEHRPSAIAVAATLVAFDQKLTRQ--------ALESCCGFLE 220
+A LA + ++ +E PS IA + T +A + T + AL+ C G+ +
Sbjct: 231 FEFLANYLAELSLLDYGCLEFVPSLIAASVTFLA---RFTIRPNVNPWSIALQKCSGY-K 286
Query: 221 VGDVSTCYSIMQKLEMEKYKTPDPSATHFGTANVSSSAVSSKRKRLTFNDSDQRSDGP 278
D+ C ++ L+M G S SAV K K+ F S P
Sbjct: 287 SKDLKECVLLLHDLQM-------------GRRGGSLSAVRDKYKKHKFKCVSTLSPAP 331
>sp|P30284|CG21_EMENI G2/mitotic-specific cyclin-B OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nimE
PE=2 SV=1
Length = 478
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 31/175 (17%)
Query: 70 IAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEECN 129
+ W++ F P+T +L+V +DRFLS + D+L +L+ VA + +A+K EE
Sbjct: 245 VDWLIEVHTRFRLLPETLFLAVNIIDRFLSAEVVALDRL---QLVGVAAMFIASKYEEVL 301
Query: 130 SE---NGAHVINNNGLENGI----NHSISFLHH---------FIRKFCKDSSPSNVLPRT 173
S N +HV + + I H ++ L + F+R+ K + ++ RT
Sbjct: 302 SPHVANFSHVADETFSDKEILDAERHILATLEYNMSYPNPMNFLRRISK-ADNYDIQTRT 360
Query: 174 VALILAIMREINLMEHR-----PSAIAVAATLVA---FDQKLTRQALESCCGFLE 220
+ L EI+L++HR S I AA +A D+ L G+ E
Sbjct: 361 LGKYLM---EISLLDHRFLGYPQSQIGAAAMYLARLILDRGPWDATLAHYAGYTE 412
>sp|Q38819|CCA23_ARATH Cyclin-A2-3 OS=Arabidopsis thaliana GN=CYCA2-3 PE=1 SV=2
Length = 450
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 89/206 (43%), Gaps = 32/206 (15%)
Query: 26 LDVEDEDEYVNTLGDKEISFGFKRGETDKSVM-------LSDDIKCARLEAIAWILNTRA 78
+D +D+D + L EI + + E + + D + R + W++
Sbjct: 175 IDSDDKDPLLCCLYAPEIHYNLRVSELKRRPLPDFMERIQKDVTQSMRGILVDWLVEVSE 234
Query: 79 VFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEECNS---ENGAH 135
+ T YL+V +D FL ++ +L +LL + C+ +A+K EE ++ E
Sbjct: 235 EYTLASDTLYLTVYLIDWFLHGNYVQRQQL---QLLGITCMLIASKYEEISAPRIEEFCF 291
Query: 136 VINNN-------GLENGINHSISFLHH------FIRKFCKDSSPSNVLPR-TVALILAIM 181
+ +N +EN + SF + F+R+F + + S + P V + + +
Sbjct: 292 ITDNTYTRDQVLEMENQVLKHFSFQIYTPTPKTFLRRFLRAAQASRLSPSLEVEFLASYL 351
Query: 182 REINLMEHR-----PSAIAVAATLVA 202
E+ L+++ PS +A +A +A
Sbjct: 352 TELTLIDYHFLKFLPSVVAASAVFLA 377
>sp|Q75I54|CCA31_ORYSJ Cyclin-A3-1 OS=Oryza sativa subsp. japonica GN=CYCA3-1 PE=3 SV=1
Length = 373
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 20/137 (14%)
Query: 70 IAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEEC- 128
+ W++ + T YL+V+Y+DRFLS + I+ KL +LL V+ + +A+K EE
Sbjct: 143 VDWLVEVAEEYKLVSDTLYLTVSYIDRFLSAKSINRQKL---QLLGVSAMLIASKYEEIS 199
Query: 129 --NSENGAHVINNN-------GLENGINHSISF------LHHFIRKFCKDSSPSNVLPR- 172
N E+ ++ +N +E I + + F F+R F + S + P
Sbjct: 200 PPNVEDFCYITDNTYMKQEVVKMERDILNVLKFEMGNPTTKTFLRMFIRSSQEDDKYPSL 259
Query: 173 TVALILAIMREINLMEH 189
+ + + + E++L+E+
Sbjct: 260 PLEFMCSYLAELSLLEY 276
>sp|Q9IBG0|CCNB2_ORYLA G2/mitotic-specific cyclin-B2 OS=Oryzias latipes GN=ccnb2 PE=2 SV=1
Length = 387
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
Query: 72 WILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEECNS- 130
W++ + F +T YL+V LDRFL + KL +L+ V + VA K EE +
Sbjct: 162 WLVQVHSRFQLLQETLYLTVAILDRFLQVHPVSRRKL---QLVGVTAMLVACKYEEMYAP 218
Query: 131 ENG--AHVINNN-------GLENGINHSISFL------HHFIRKFCKDSSPSNVLPRTVA 175
E G A++ +N +E I S+SF HF+R+ K + ++V T+A
Sbjct: 219 EVGDFAYITDNAFTKSQIVEMEQVILRSLSFQLGRPLPLHFLRRATKVAG-ADVEKHTLA 277
Query: 176 --LILAIMREINLMEHRPSAIAVAA 198
L+ + + +++ +RPS +A AA
Sbjct: 278 KYLMELTLLDYHMVHYRPSEVAAAA 302
>sp|Q9DG96|CCNB2_ORYLU G2/mitotic-specific cyclin-B2 OS=Oryzias luzonensis GN=ccnb2 PE=2
SV=1
Length = 386
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 22/145 (15%)
Query: 72 WILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEECNSE 131
W++ + F +T YL+V LDRFL + KL +L+ V + VA K EE +
Sbjct: 161 WLVQVHSRFQLLQETLYLTVAILDRFLQVHPVSRRKL---QLVGVTAMLVACKYEEMYTP 217
Query: 132 NGA--HVINNNG--------LENGINHSISFL------HHFIRKFCKDSSPSNVLPRTVA 175
A I +N +E I S+SF HF+R+ K + ++V T+A
Sbjct: 218 EVADFSYITDNAFTKSQIVEMEQVILRSLSFQLGRPLPLHFLRRATKVAG-ADVEKHTLA 276
Query: 176 --LILAIMREINLMEHRPSAIAVAA 198
L+ + + +++ +RPS +A AA
Sbjct: 277 KYLMELTLLDYHMVHYRPSEVAAAA 301
>sp|Q10PQ9|CCSDS_ORYSJ Cyclin-SDS-like OS=Oryza sativa subsp. japonica GN=Os03g0225200
PE=2 SV=1
Length = 469
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 66 RLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKM 125
R+ + WI+ +P+T ++ + +DRFL+ ++ + ++LL +AC ++A ++
Sbjct: 276 RVVMVNWIMEHSQAMKLQPETVFMGIGLMDRFLTRGYVKGSR--NLQLLGIACTTLATRI 333
Query: 126 EECNSENGAHVINNNGLENGIN 147
EE N I + GIN
Sbjct: 334 EENQPYN---CILQKAFKVGIN 352
>sp|P24871|CG24_YEAST G2/mitotic-specific cyclin-4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLB4 PE=1 SV=2
Length = 460
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 66 RLEAIAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKM 125
R I W++ F P+T YL++ +DRFLS + + ++ +L+ V+ + +AAK
Sbjct: 240 RRTMIDWLVQLHFRFQLLPETLYLTINIVDRFLSKKTVTLNRF---QLVGVSALFIAAKF 296
Query: 126 EECNS---ENGAHVINNNGLENGINHSISFL-------------HHFIRKFCKDSSPSNV 169
EE N ++ +++ N + I + ++ F+R+ K + +
Sbjct: 297 EEINCPTLDDLVYMLENTYTRDDIIRAEQYMIDTLEFEIGWPGPMPFLRRISK-ADDYDF 355
Query: 170 LPRTVA--LILAIMREINLMEHRPSAIAVAATLVA 202
PRT+A L+ + E L+ PS +A A ++
Sbjct: 356 EPRTLAKYLLETTIVEPKLVAAAPSWLAAGAYFLS 390
>sp|Q9FMH5|CCA31_ARATH Putative cyclin-A3-1 OS=Arabidopsis thaliana GN=CYCA3-1 PE=3 SV=1
Length = 355
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 31/158 (19%)
Query: 70 IAWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEEC- 128
+ W++ + T YL+V+Y+DRFLS + ++ +L +LL V + +A+K EE
Sbjct: 125 VDWLVEVAEEYKLLSDTLYLAVSYIDRFLSLKTVNKQRL---QLLGVTSMLIASKYEEIT 181
Query: 129 --NSENGAHVINNN-----------------GLENGINHSISFLHHFIRKFCKDSSPSNV 169
N ++ ++ +N E G S +FL F R +D S++
Sbjct: 182 PPNVDDFCYITDNTYTKQEIVKMEADILLALQFELGNPTSNTFLRRFTRVAQEDFEMSHL 241
Query: 170 LPRTVALILAIMREINLMEHR-----PSAIAVAATLVA 202
+ + + + E+++++++ PS +A +A +A
Sbjct: 242 ---QMEFLCSYLSELSMLDYQSVKFLPSTVAASAVFLA 276
>sp|P10815|CG23_SCHPO G2/mitotic-specific cyclin cdc13 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cdc13 PE=1 SV=1
Length = 482
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 31/188 (16%)
Query: 72 WILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEE--CN 129
W++ + F P+T +L+V +DRFLS R +KL +L+ +A + +A+K EE C
Sbjct: 242 WLIEVHSRFRLLPETLFLAVNIIDRFLSLRVCSLNKL---QLVGIAALFIASKYEEVMCP 298
Query: 130 S-ENGAHVINNNGLENGINHSISFL-------------HHFIRKFCKDSSPSNVLPRTVA 175
S +N ++ + E I + ++ +F+R+ K + ++ RTVA
Sbjct: 299 SVQNFVYMADGGYDEEEILQAERYILRVLEFNLAYPNPMNFLRRISK-ADFYDIQTRTVA 357
Query: 176 LILAIMREINLMEHR----PSAIAVAATLVAFDQKLTR----QALESCCGFLEVGDVSTC 227
L EI L++H+ P + AA + + L R + L G+ E +S
Sbjct: 358 KYLV---EIGLLDHKLLPYPPSQQCAAAMYLAREMLGRGPWNRNLVHYSGYEEYQLISVV 414
Query: 228 YSIMQKLE 235
++ L+
Sbjct: 415 KKMINYLQ 422
>sp|P04962|CCNA_SPISO G2/mitotic-specific cyclin-A OS=Spisula solidissima PE=2 SV=1
Length = 422
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 13 PESKTCLDEDSAVLDV-EDEDEYVNTLGDKEISFGFKRGETDKSVMLSDDIKCARLEAIA 71
PE + LD ++ +L V E E++ N L E+ K G + ++ ++C ++
Sbjct: 145 PEEEKPLDREAVILTVPEYEEDIYNYLRQAEMKNRAKPGYMKRQTDITTSMRCILVD--- 201
Query: 72 WILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEE 127
W++ +T +L V Y+DRFLS + KL +L+ A + +AAK EE
Sbjct: 202 WLVEVSEEDKLHRETLFLGVNYIDRFLSKISVLRGKL---QLVGAASMFLAAKYEE 254
>sp|Q92161|CCNA1_CARAU Cyclin-A1 OS=Carassius auratus GN=ccna1 PE=2 SV=1
Length = 391
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 15 SKTCLDEDSAVLDVEDEDEYVN----TLGDKEISFGFKRGETDKSVMLSDDIKCARLEAI 70
S L E++A D+ EY L + E+ + K G K D C R+ +
Sbjct: 118 SMQSLPEEAAYEDILCVPEYAEDIHRYLRECEVKYRPKPGYMRKQ---PDITNCMRVILV 174
Query: 71 AWILNTRAVFGFRPKTAYLSVTYLDRFLSTRFIDSDKLWAIKLLSVACVSVAAKMEE 127
W++ + +T +L+V YLDRFLS + KL +L+ A V +AAK EE
Sbjct: 175 DWLVEVGEEYKLCSETLFLAVNYLDRFLSCMSVLRGKL---QLVGTAAVLLAAKYEE 228
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,168,332
Number of Sequences: 539616
Number of extensions: 3988115
Number of successful extensions: 10415
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 10298
Number of HSP's gapped (non-prelim): 184
length of query: 284
length of database: 191,569,459
effective HSP length: 116
effective length of query: 168
effective length of database: 128,974,003
effective search space: 21667632504
effective search space used: 21667632504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)