BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046448
(188 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q2L|A Chain A, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
pdb|2Q2L|B Chain B, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
Length = 152
Score = 151 bits (382), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/149 (55%), Positives = 99/149 (66%), Gaps = 3/149 (2%)
Query: 37 IAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGSH 96
+AV++ EG G+I F Q+GD GPT + G FHVHA GDT + C S G H
Sbjct: 5 VAVLSSSEG-VAGTILFTQEGD-GPTTVTGNISGLKPGLHGFHVHALGDTTNGCMSTGPH 62
Query: 97 FNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVIHKD 156
FNP HGS EDE RHAGDLGN+ V G A + +D +I LTGPHSIIGRA+V+H D
Sbjct: 63 FNPAGKEHGSPEDETRHAGDLGNITVGDDGTACFT-IVDKQIPLTGPHSIIGRAVVVHAD 121
Query: 157 QDDFGRGGHNDSKSTGHAGERIACGVIGL 185
DD G+GGH SKSTG+AG RIACG+IGL
Sbjct: 122 PDDLGKGGHELSKSTGNAGGRIACGIIGL 150
>pdb|1TO4|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
Length = 156
Score = 137 bits (344), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 99/157 (63%), Gaps = 2/157 (1%)
Query: 31 GNKVNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHEC 90
G+ + A+ V+TG G KG + F Q+ D+GP ++ FHVH GDT + C
Sbjct: 1 GSNMKAVCVMTGT-AGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGC 59
Query: 91 NSAGSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRA 150
SAG+HFNP HG+ ED RH GDLGN++ GNA + D I L G HSIIGR+
Sbjct: 60 TSAGAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYN-ATDKLISLNGSHSIIGRS 118
Query: 151 IVIHKDQDDFGRGGHNDSKSTGHAGERIACGVIGLLS 187
+VIH+++DD GRGGH SK TG+AG R+ACGV+GL +
Sbjct: 119 MVIHENEDDLGRGGHELSKVTGNAGGRLACGVVGLAA 155
>pdb|3KM1|A Chain A, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM1|B Chain B, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|A Chain A, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|B Chain B, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|C Chain C, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|D Chain D, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|E Chain E, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|F Chain F, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|G Chain G, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|H Chain H, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|I Chain I, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|J Chain J, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|K Chain K, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|L Chain L, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|M Chain M, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|N Chain N, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|O Chain O, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|P Chain P, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|Q Chain Q, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|R Chain R, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|S Chain S, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|T Chain T, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|U Chain U, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|V Chain V, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|W Chain W, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|X Chain X, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|A Chain A, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|B Chain B, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|A Chain A, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|B Chain B, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3HOG|A Chain A, Metal-Free Tomato Chloroplast Superoxide Dismutase
pdb|3S0P|A Chain A, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|B Chain B, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|C Chain C, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|D Chain D, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|E Chain E, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|F Chain F, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|G Chain G, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|H Chain H, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
Length = 154
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 100/150 (66%), Gaps = 3/150 (2%)
Query: 36 AIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGS 95
A+AV+ G +G + QD D GPT +N FH+H GDT + C S G+
Sbjct: 5 AVAVLKGNSN-VEGVVTLSQD-DDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGA 62
Query: 96 HFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVIHK 155
HFNP+ + HG+ DE RHAGDLGN++ + G A ++ +DN+I LTGP+S++GRA+V+H+
Sbjct: 63 HFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVT-LVDNQIPLTGPNSVVGRALVVHE 121
Query: 156 DQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
+DD G+GGH S +TG+AG R+ACGV+GL
Sbjct: 122 LEDDLGKGGHELSLTTGNAGGRLACGVVGL 151
>pdb|1SRD|A Chain A, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|B Chain B, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|C Chain C, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|D Chain D, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
Length = 154
Score = 133 bits (334), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 97/150 (64%), Gaps = 3/150 (2%)
Query: 36 AIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGS 95
A+AV+ G +G + Q+ D GPT +N FH+H GDT + C S G
Sbjct: 5 AVAVLKGTSN-VEGVVTLTQE-DDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGP 62
Query: 96 HFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVIHK 155
HFNP HG+ EDE RHAGDLGN++ + G A + +DN+I LTGP+S++GRA+V+H+
Sbjct: 63 HFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEAT-IVDNQIPLTGPNSVVGRALVVHE 121
Query: 156 DQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
+DD G+GGH S +TG+AG R+ACGV+GL
Sbjct: 122 LEDDLGKGGHELSPTTGNAGGRLACGVVGL 151
>pdb|3GTT|A Chain A, Mouse Sod1
pdb|3GTT|B Chain B, Mouse Sod1
pdb|3GTT|C Chain C, Mouse Sod1
pdb|3GTT|D Chain D, Mouse Sod1
pdb|3GTT|E Chain E, Mouse Sod1
pdb|3GTT|F Chain F, Mouse Sod1
Length = 153
Score = 130 bits (326), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
+ A+ V+ G +G +G+I F Q P +L+G FHVH GD C SA
Sbjct: 2 MKAVCVLKG-DGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNPH+ HG DE RH GDLGN+ G A +S D I L+G HSIIGR +V+
Sbjct: 61 GPHFNPHSKKHGGPADEERHVGDLGNVTAGKDGVANVS-IEDRVISLSGEHSIIGRTMVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ QDD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3F7K|A Chain A, X-Ray Crystal Structure Of An Alvinella Pompejana Cu,Zn
Superoxide Dismutase- Hydrogen Peroxide Complex
pdb|3F7L|A Chain A, X-Ray Crystal Structure Of Alvinella Pompejana Cu,Zn
Superoxide Dismutase
Length = 152
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 95/152 (62%), Gaps = 4/152 (2%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
++A+ V+ G + G+I ++GD + G FHVH GD + C SA
Sbjct: 2 IHAVCVLKG-DSPVTGTIHLKEEGDM--VTVTGEITGLTPGKHGFHVHEFGDNTNGCTSA 58
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNPH HG+ EDE+RHAGDLGN++ G A ++ D ++LTGP S+IGR +V+
Sbjct: 59 GGHFNPHGKEHGAPEDENRHAGDLGNVVAGEDGKAVIN-MKDKLVKLTGPDSVIGRTLVV 117
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H D+DD GRGGH SK TG+AG R+ACGVIG+
Sbjct: 118 HVDEDDLGRGGHEQSKITGNAGGRLACGVIGI 149
>pdb|3LTV|A Chain A, Mouse-Human Sod1 Chimera
pdb|3LTV|B Chain B, Mouse-Human Sod1 Chimera
pdb|3LTV|C Chain C, Mouse-Human Sod1 Chimera
pdb|3LTV|D Chain D, Mouse-Human Sod1 Chimera
pdb|3LTV|E Chain E, Mouse-Human Sod1 Chimera
pdb|3LTV|F Chain F, Mouse-Human Sod1 Chimera
Length = 153
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
+ A+ V+ G +G +G+I F Q P +L+G FHVH GD C SA
Sbjct: 2 MKAVCVLKG-DGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNPH+ HG DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 61 GPHFNPHSKKHGGPADEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1PTZ|A Chain A, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
pdb|1PTZ|B Chain B, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
Length = 153
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+AV+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLRGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G HSIIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHSIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1N18|A Chain A, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|B Chain B, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|C Chain C, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|D Chain D, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|E Chain E, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|F Chain F, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|G Chain G, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|H Chain H, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|I Chain I, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|J Chain J, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
Length = 154
Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+AV+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G HSIIGR +V+
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHSIIGRTLVV 120
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 121 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|1FUN|A Chain A, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|F Chain F, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|B Chain B, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|G Chain G, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|C Chain C, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|H Chain H, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|D Chain D, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|I Chain I, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|E Chain E, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|J Chain J, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
Length = 153
Score = 123 bits (309), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+AV+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G HSIIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHSIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTETGNAGSRLACGVIGI 151
>pdb|1SOS|A Chain A, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|F Chain F, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|B Chain B, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|G Chain G, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|C Chain C, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|H Chain H, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|D Chain D, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|I Chain I, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|E Chain E, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|J Chain J, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
Length = 154
Score = 123 bits (309), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+AV+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G HSIIGR +V+
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHSIIGRTLVV 120
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 121 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|1L3N|A Chain A, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|1L3N|B Chain B, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|2AF2|A Chain A, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2AF2|B Chain B, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2LU5|A Chain A, Structure And Chemical Shifts Of Cu(I),Zn(Ii) Superoxide
Dismutase By Solid-State Nmr
Length = 153
Score = 123 bits (309), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+AV+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G HSIIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHSIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3ECW|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
Length = 153
Score = 122 bits (307), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD R C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNRAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|2GBT|A Chain A, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|B Chain B, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|C Chain C, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|D Chain D, C6aC111A CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+AV+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H+IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHAIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1N19|A Chain A, Structure Of The Hsod A4v Mutant
pdb|1N19|B Chain B, Structure Of The Hsod A4v Mutant
Length = 154
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Query: 37 IAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGSH 96
+AV+ G +G +G I F Q +GP + G FHVH GD C SAG H
Sbjct: 6 VAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 64
Query: 97 FNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVIHKD 156
FNP + HG +DE RH GDLGN+ D G A +S D+ I L+G HSIIGR +V+H+
Sbjct: 65 FNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHSIIGRTLVVHEK 123
Query: 157 QDDFGRGGHNDSKSTGHAGERIACGVIGL 185
DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 124 ADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|3GTV|A Chain A, Human-Mouse Sod1 Chimera
pdb|3GTV|B Chain B, Human-Mouse Sod1 Chimera
pdb|3GTV|C Chain C, Human-Mouse Sod1 Chimera
pdb|3GTV|D Chain D, Human-Mouse Sod1 Chimera
pdb|3GTV|E Chain E, Human-Mouse Sod1 Chimera
pdb|3GTV|F Chain F, Human-Mouse Sod1 Chimera
pdb|3GTV|G Chain G, Human-Mouse Sod1 Chimera
pdb|3GTV|H Chain H, Human-Mouse Sod1 Chimera
pdb|3GTV|I Chain I, Human-Mouse Sod1 Chimera
pdb|3GTV|J Chain J, Human-Mouse Sod1 Chimera
pdb|3GTV|K Chain K, Human-Mouse Sod1 Chimera
pdb|3GTV|L Chain L, Human-Mouse Sod1 Chimera
Length = 153
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ G A +S D I L+G HSIIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTAGKDGVANVS-IEDRVISLSGEHSIIGRTMVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ QDD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1E9P|A Chain A, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 91/154 (59%), Gaps = 4/154 (2%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
+A+ V++G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 2 TSAVCVLSG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 58
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG DE RH GDLGN+ D G A + +D I L+G +SIIGR +V+
Sbjct: 59 GPHFNPLSKKHGGPSDEERHVGDLGNVTADSNGVAIVD-IVDPLISLSGEYSIIGRTMVV 117
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGLLS 187
H+ DD GRGG+ +S TG+AG R+ACGVIG+ S
Sbjct: 118 HEKPDDLGRGGNEESTKTGNAGSRLACGVIGIAS 151
>pdb|1E9P|B Chain B, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 92/154 (59%), Gaps = 4/154 (2%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
+A+ V++G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 2 TSAVCVLSG-DGPVQGTIHFEASGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 58
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG D+ RH GDLGN+ D G A + +D I L+G +SIIGR +V+
Sbjct: 59 GPHFNPLSKKHGGPSDDERHVGDLGNVTADKNGVAIVD-IVDPLISLSGEYSIIGRTMVV 117
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGLLS 187
H+ DD GRGG+ +S STG+AG R+ACGVIG+ S
Sbjct: 118 HEKPDDLGRGGNEESTSTGNAGSRLACGVIGIAS 151
>pdb|1MFM|A Chain A, Monomeric Human Sod Mutant F50eG51EE133Q AT ATOMIC
Resolution
pdb|1KMG|A Chain A, The Solution Structure Of Monomeric Copper-Free Superoxide
Dismutase
pdb|1RK7|A Chain A, Solution Structure Of Apo Cu,Zn Superoxide Dismutase: Role
Of Metal Ions In Protein Folding
Length = 153
Score = 121 bits (303), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+AV+ G +G +G I F Q +GP + G FHVH D C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G HSIIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHSIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEQSTKTGNAGSRLACGVIGI 151
>pdb|1BA9|A Chain A, The Solution Structure Of Reduced Monomeric Superoxide
Dismutase, Nmr, 36 Structures
Length = 153
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+AV+ G +G +G I F Q +GP + G FHVH D C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G HSIIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHSIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEQSTKTGNAGSRLACGVIGI 151
>pdb|3SOD|O Chain O, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|Y Chain Y, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|G Chain G, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|B Chain B, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
Length = 152
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+AV+ G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 3 TKAVAVLKG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 59
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A + +D I L+G +SIIGR +V+
Sbjct: 60 GPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVD-IVDPLISLSGEYSIIGRTMVV 118
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD GRGG+ +S TG+AG R+ACGVIG+
Sbjct: 119 HEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 150
>pdb|4BCY|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Mutation H43f
Length = 153
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+AV+ G +G +G I F Q +GP + G FHVH D C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLFGFHVHEEEDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H+IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHAIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|2XJK|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase
Length = 153
Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+AV+ G +G +G I F Q +GP + G FHVH D C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H+IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHAIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3CE1|A Chain A, Crystal Structure Of The CuZN SUPEROXIDE DISMUTASE FROM
Cryptococcus Liquefaciens Strain N6
Length = 168
Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 89/155 (57%), Gaps = 3/155 (1%)
Query: 32 NKVNAIAVITGREGGPKGSIFFFQDGDHGPTILNG-YXXXXXXXXXXFHVHAAGDTRHEC 90
+ + AIAV+ G + +G I F Q+ GP ++G FHVH GD + C
Sbjct: 3 STIKAIAVLKG-DSPVQGVITFTQESSGGPVTVSGEIKNMDANAQRGFHVHQFGDNSNGC 61
Query: 91 NSAGSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRA 150
SAG HFNP HG + E RH GDLGN+ D G A + D+++ L GPHSIIGR
Sbjct: 62 TSAGPHFNPTGTNHGDRTAEVRHVGDLGNVKTDASGVAKV-QISDSQLSLVGPHSIIGRT 120
Query: 151 IVIHKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
IVIH +DD G+ H +S TG+AG R ACGVIG+
Sbjct: 121 IVIHAGEDDLGKTDHPESLKTGNAGARSACGVIGI 155
>pdb|1E9O|A Chain A, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 91/152 (59%), Gaps = 4/152 (2%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
+A+ V++G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 3 TSAVCVLSG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 59
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A + +D I L+G +SIIGR +V+
Sbjct: 60 GPHFNPLSKKHGGPKDEERHVGDLGNVTADSNGVAIVD-IVDPLISLSGEYSIIGRTMVV 118
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD GRGG+ +S TG+AG R+ACGVIG+
Sbjct: 119 HEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 150
>pdb|1E9Q|A Chain A, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 91/152 (59%), Gaps = 4/152 (2%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
+A+ V++G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 2 TSAVCVLSG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 58
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A + +D I L+G +SIIGR +V+
Sbjct: 59 GPHFNPLSKKHGGPKDEERHVGDLGNVTADSNGVAIVD-IVDPLISLSGEYSIIGRTMVV 117
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD GRGG+ +S TG+AG R+ACGVIG+
Sbjct: 118 HEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 149
>pdb|3L9E|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|C Chain C, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|D Chain D, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 79/137 (57%)
Query: 49 GSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGSHFNPHNMLHGSKE 108
G++FF Q + P +++G FHVH GD + C SAG+HFNP HG
Sbjct: 15 GTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPS 74
Query: 109 DEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVIHKDQDDFGRGGHNDS 168
RH GDLGN+ D++I L GP+SIIGR +V+H D DD G GGH S
Sbjct: 75 SAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGHELS 134
Query: 169 KSTGHAGERIACGVIGL 185
K+TG+AG RIACGVIGL
Sbjct: 135 KTTGNAGGRIACGVIGL 151
>pdb|1AZV|A Chain A, Familial Als Mutant G37r Cuznsod (Human)
pdb|1AZV|B Chain B, Familial Als Mutant G37r Cuznsod (Human)
Length = 153
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKRLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|2WYZ|A Chain A, L38v Sod1 Mutant Complexed With Ump
pdb|2WYZ|F Chain F, L38v Sod1 Mutant Complexed With Ump
Length = 153
Score = 120 bits (300), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHXIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1HL4|A Chain A, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|B Chain B, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|C Chain C, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|D Chain D, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1SPD|A Chain A, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
pdb|1SPD|B Chain B, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
Length = 154
Score = 120 bits (300), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVV 120
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 121 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|2WYT|A Chain A, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WYT|F Chain F, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WZ0|A Chain A, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ0|F Chain F, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ5|A Chain A, L38v Sod1 Mutant Complexed With L-Methionine.
pdb|2WZ5|F Chain F, L38v Sod1 Mutant Complexed With L-Methionine
Length = 153
Score = 120 bits (300), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1HL5|A Chain A, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|B Chain B, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|C Chain C, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|D Chain D, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|E Chain E, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|F Chain F, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|G Chain G, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|H Chain H, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|I Chain I, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|J Chain J, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|K Chain K, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|L Chain L, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|M Chain M, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|N Chain N, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|O Chain O, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|P Chain P, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|Q Chain Q, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|S Chain S, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1PU0|A Chain A, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|B Chain B, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|C Chain C, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|D Chain D, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|E Chain E, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|F Chain F, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|G Chain G, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|H Chain H, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|I Chain I, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|J Chain J, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|2C9U|A Chain A, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9U|F Chain F, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9V|A Chain A, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2C9V|F Chain F, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2V0A|A Chain A, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|2V0A|F Chain F, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|3ECU|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3KH3|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|G Chain G, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|H Chain H, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|I Chain I, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|J Chain J, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|K Chain K, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|L Chain L, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH4|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3RE0|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
Length = 153
Score = 120 bits (300), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|2C9S|A Chain A, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|2C9S|F Chain F, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|3T5W|A Chain A, 2me Modified Human Sod1
pdb|3T5W|B Chain B, 2me Modified Human Sod1
pdb|3T5W|D Chain D, 2me Modified Human Sod1
pdb|3T5W|E Chain E, 2me Modified Human Sod1
pdb|3T5W|F Chain F, 2me Modified Human Sod1
pdb|3T5W|G Chain G, 2me Modified Human Sod1
pdb|3T5W|H Chain H, 2me Modified Human Sod1
pdb|3T5W|I Chain I, 2me Modified Human Sod1
pdb|3T5W|J Chain J, 2me Modified Human Sod1
pdb|3T5W|K Chain K, 2me Modified Human Sod1
pdb|3T5W|L Chain L, 2me Modified Human Sod1
pdb|3T5W|M Chain M, 2me Modified Human Sod1
Length = 153
Score = 120 bits (300), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHXIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|4B3E|A Chain A, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|B Chain B, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|C Chain C, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|D Chain D, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|E Chain E, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|F Chain F, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|G Chain G, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|H Chain H, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|I Chain I, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|J Chain J, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate
Length = 154
Score = 120 bits (300), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVV 120
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 121 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|3MND|A Chain A, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
pdb|3MND|B Chain B, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
Length = 152
Score = 120 bits (300), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 87/152 (57%), Gaps = 4/152 (2%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
+ A+ V+ G EG KG + F Q GD ++ FHVH GDT C SA
Sbjct: 1 MKAVCVMRGEEG-VKGVVHFTQAGD--AVKVHAEFEGLKPGKHGFHVHEFGDTTQGCTSA 57
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G+HFNPH HG+ + RH GDLGN+ G A L D I LTG HS+IGR++VI
Sbjct: 58 GAHFNPHGKNHGAPDAAERHVGDLGNVTAGADGKATLD-LTDKMISLTGEHSVIGRSLVI 116
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H D DD G GGH S TG+AG R+ACG+IG+
Sbjct: 117 HVDPDDLGLGGHELSLITGNAGGRVACGIIGI 148
>pdb|1Q0E|A Chain A, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|1Q0E|B Chain B, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|2SOD|O Chain O, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|Y Chain Y, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|B Chain B, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|G Chain G, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
Length = 152
Score = 119 bits (298), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 59
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A + +D I L+G +SIIGR +V+
Sbjct: 60 GPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVD-IVDPLISLSGEYSIIGRTMVV 118
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD GRGG+ +S TG+AG R+ACGVIG+
Sbjct: 119 HEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 150
>pdb|1COB|A Chain A, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1COB|B Chain B, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1SXA|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXA|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXN|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXN|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXS|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXS|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXZ|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1SXZ|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1CBJ|A Chain A, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|1CBJ|B Chain B, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|2AEO|A Chain A, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2AEO|B Chain B, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2Z7U|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7U|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|3HW7|A Chain A, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
pdb|3HW7|B Chain B, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
Length = 151
Score = 119 bits (298), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 58
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A + +D I L+G +SIIGR +V+
Sbjct: 59 GPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVD-IVDPLISLSGEYSIIGRTMVV 117
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD GRGG+ +S TG+AG R+ACGVIG+
Sbjct: 118 HEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 149
>pdb|1E9Q|B Chain B, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 119 bits (298), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 58
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +D+ RH GDLGN+ D G A + +D I L+G +SIIGR +V+
Sbjct: 59 GPHFNPLSKKHGGPKDDERHVGDLGNVTADKNGVAIVD-IVDPLISLSGEYSIIGRTMVV 117
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD GRGG+ +S STG+AG R+ACGVIG+
Sbjct: 118 HEKPDDLGRGGNEESTSTGNAGSRLACGVIGI 149
>pdb|1E9O|B Chain B, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 119 bits (298), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 59
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +D+ RH GDLGN+ D G A + +D I L+G +SIIGR +V+
Sbjct: 60 GPHFNPLSKKHGGPKDDERHVGDLGNVTADKNGVAIVD-IVDPLISLSGEYSIIGRTMVV 118
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD GRGG+ +S STG+AG R+ACGVIG+
Sbjct: 119 HEKPDDLGRGGNEESTSTGNAGSRLACGVIGI 150
>pdb|2R27|A Chain A, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
pdb|2R27|B Chain B, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
Length = 154
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+AV+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE R G LGN+ D G A +S D+ I L+G HSIIGR +V+
Sbjct: 62 GPHFNPLSRKHGGPKDEERSVGSLGNVTADKDGVADVS-IEDSVISLSGDHSIIGRTLVV 120
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 121 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|1DSW|A Chain A, The Solution Structure Of A Monomeric, Reduced Form Of
Human Copper, Zinc Superoxide Dismutase Bearing The Same
Charge As The Native Protein
Length = 153
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+AV+ G +G +G I F Q +GP + G FHVH D C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G HSIIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHSIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIG 184
H+ DD G+GG+ +S TG+AG R+ACG IG
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGKIG 150
>pdb|1OZU|A Chain A, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
pdb|1OZU|B Chain B, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
Length = 153
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 36 AIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGS 95
A+ V+ G +G +G I F Q +GP + G FHVH GD C SAG
Sbjct: 4 AVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGP 62
Query: 96 HFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVIHK 155
HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+H+
Sbjct: 63 HFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHXIIGRTLVVHE 121
Query: 156 DQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
DD G+GG+ ++ TG+AG R+ACGVIG+
Sbjct: 122 KADDLGKGGNEENTKTGNAGSRLACGVIGI 151
>pdb|3L9Y|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9Y|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 79/137 (57%)
Query: 49 GSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGSHFNPHNMLHGSKE 108
G++FF Q + P +++G FHVH GD + C SAG+HFNP HG
Sbjct: 15 GTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPS 74
Query: 109 DEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVIHKDQDDFGRGGHNDS 168
RH GDLGN+ D++I L GP+SIIGR +V+H D DD G GG+ S
Sbjct: 75 SAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGNELS 134
Query: 169 KSTGHAGERIACGVIGL 185
K+TG+AG RIACGVIGL
Sbjct: 135 KTTGNAGGRIACGVIGL 151
>pdb|1SDA|O Chain O, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|Y Chain Y, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|B Chain B, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|G Chain G, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
Length = 152
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 59
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A + +D I L+G SIIGR +V+
Sbjct: 60 GPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVD-IVDPLISLSGEXSIIGRTMVV 118
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD GRGG+ +S TG+AG R+ACGVIG+
Sbjct: 119 HEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 150
>pdb|1F1G|A Chain A, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|B Chain B, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|C Chain C, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|D Chain D, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|E Chain E, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|F Chain F, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
Length = 154
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 89/153 (58%), Gaps = 3/153 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILN-GYXXXXXXXXXXFHVHAAGDTRHECNS 92
V A+AV+ G + G G + F Q + PT ++ FH+H GD + C S
Sbjct: 2 VQAVAVLKG-DAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVS 60
Query: 93 AGSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIV 152
AG HFNP HG+ DE RH GD+GN+ D G A S F D+ I+L GP S++GR++V
Sbjct: 61 AGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGS-FKDSLIKLIGPTSVVGRSVV 119
Query: 153 IHKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
IH QDD G+G +S TG+AG R ACGVIGL
Sbjct: 120 IHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 152
>pdb|1UXM|A Chain A, A4v Mutant Of Human Sod1
pdb|1UXM|B Chain B, A4v Mutant Of Human Sod1
pdb|1UXM|C Chain C, A4v Mutant Of Human Sod1
pdb|1UXM|D Chain D, A4v Mutant Of Human Sod1
pdb|1UXM|E Chain E, A4v Mutant Of Human Sod1
pdb|1UXM|F Chain F, A4v Mutant Of Human Sod1
pdb|1UXM|G Chain G, A4v Mutant Of Human Sod1
pdb|1UXM|H Chain H, A4v Mutant Of Human Sod1
pdb|1UXM|I Chain I, A4v Mutant Of Human Sod1
pdb|1UXM|J Chain J, A4v Mutant Of Human Sod1
pdb|1UXM|K Chain K, A4v Mutant Of Human Sod1
pdb|1UXM|L Chain L, A4v Mutant Of Human Sod1
Length = 153
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Query: 37 IAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGSH 96
+ V+ G +G +G I F Q +GP + G FHVH GD C SAG H
Sbjct: 5 VCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 97 FNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVIHKD 156
FNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+H+
Sbjct: 64 FNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVVHEK 122
Query: 157 QDDFGRGGHNDSKSTGHAGERIACGVIGL 185
DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 123 ADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3GZQ|A Chain A, Human Sod1 A4v Metal-Free Variant
pdb|3GZQ|B Chain B, Human Sod1 A4v Metal-Free Variant
Length = 154
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Query: 37 IAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGSH 96
+ V+ G +G +G I F Q +GP + G FHVH GD C SAG H
Sbjct: 6 VCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 64
Query: 97 FNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVIHKD 156
FNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+H+
Sbjct: 65 FNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVVHEK 123
Query: 157 QDDFGRGGHNDSKSTGHAGERIACGVIGL 185
DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 124 ADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|1SDY|A Chain A, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|B Chain B, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|C Chain C, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|D Chain D, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1B4L|A Chain A, 15 Atmosphere Oxygen Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1YAZ|A Chain A, Azide-Bound Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1JCV|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE LOW
TEMPERATURE (-180c) Structure
pdb|1YSO|A Chain A, Yeast Cu, Zn Superoxide Dismutase With The Reduced Bridge
Broken
pdb|2JCW|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
Length = 153
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 89/153 (58%), Gaps = 3/153 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILN-GYXXXXXXXXXXFHVHAAGDTRHECNS 92
V A+AV+ G + G G + F Q + PT ++ FH+H GD + C S
Sbjct: 1 VQAVAVLKG-DAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVS 59
Query: 93 AGSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIV 152
AG HFNP HG+ DE RH GD+GN+ D G A S F D+ I+L GP S++GR++V
Sbjct: 60 AGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGS-FKDSLIKLIGPTSVVGRSVV 118
Query: 153 IHKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
IH QDD G+G +S TG+AG R ACGVIGL
Sbjct: 119 IHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 151
>pdb|1UXL|A Chain A, I113t Mutant Of Human Sod1
pdb|1UXL|B Chain B, I113t Mutant Of Human Sod1
pdb|1UXL|C Chain C, I113t Mutant Of Human Sod1
pdb|1UXL|D Chain D, I113t Mutant Of Human Sod1
pdb|1UXL|E Chain E, I113t Mutant Of Human Sod1
pdb|1UXL|F Chain F, I113t Mutant Of Human Sod1
pdb|1UXL|G Chain G, I113t Mutant Of Human Sod1
pdb|1UXL|H Chain H, I113t Mutant Of Human Sod1
pdb|1UXL|I Chain I, I113t Mutant Of Human Sod1
pdb|1UXL|J Chain J, I113t Mutant Of Human Sod1
pdb|3ECV|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|4A7G|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group.
pdb|4A7Q|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7Q|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7S|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7S|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7T|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7T|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7U|A Chain A, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7U|F Chain F, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7V|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
pdb|4A7V|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
Length = 153
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H I GR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHCITGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|2ZKY|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|E Chain E, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|F Chain F, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|G Chain G, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|H Chain H, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|I Chain I, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|J Chain J, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
Length = 159
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 8 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 66
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D A +S D+ I L+G H IIGR +V+
Sbjct: 67 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVS-IEDSVISLSGDHCIIGRTLVV 125
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 126 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 157
>pdb|3GZP|A Chain A, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|B Chain B, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|C Chain C, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|D Chain D, Human Sod1 G93a Metal-Free Variant
pdb|2WZ6|A Chain A, G93a Sod1 Mutant Complexed With Quinazoline.
pdb|2WZ6|F Chain F, G93a Sod1 Mutant Complexed With Quinazoline
Length = 153
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D A +S D+ I L+G H IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVS-IEDSVISLSGDHCIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3GZO|A Chain A, Human Sod1 G93a Variant
pdb|3GZO|B Chain B, Human Sod1 G93a Variant
pdb|3GZO|C Chain C, Human Sod1 G93a Variant
pdb|3GZO|D Chain D, Human Sod1 G93a Variant
pdb|3GZO|E Chain E, Human Sod1 G93a Variant
pdb|3GZO|F Chain F, Human Sod1 G93a Variant
pdb|3GZO|G Chain G, Human Sod1 G93a Variant
pdb|3GZO|H Chain H, Human Sod1 G93a Variant
pdb|3GZO|I Chain I, Human Sod1 G93a Variant
pdb|3GZO|J Chain J, Human Sod1 G93a Variant
pdb|2WKO|A Chain A, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D A +S D+ I L+G H IIGR +V+
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVS-IEDSVISLSGDHCIIGRTLVV 120
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 121 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|2WKO|F Chain F, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D A +S D+ I L+G H IIGR +V+
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVS-IEDSVISLSGDHXIIGRTLVV 120
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 121 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|3QQD|A Chain A, Human Sod1 H80r Variant, P212121 Crystal Form
pdb|3QQD|B Chain B, Human Sod1 H80r Variant, P212121 Crystal Form
Length = 154
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE R GDLGN+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 62 GPHFNPLSRKHGGPKDEERRVGDLGNVTADKDGVADVS-IEDSVISLSGDHXIIGRTLVV 120
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 121 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|1OEZ|W Chain W, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|X Chain X, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Y Chain Y, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Z Chain Z, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OZT|M Chain M, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|N Chain N, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|G Chain G, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|H Chain H, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|K Chain K, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|L Chain L, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|I Chain I, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|J Chain J, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
Length = 153
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G F VH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3H2Q|A Chain A, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|B Chain B, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|C Chain C, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|D Chain D, Human Sod1 H80r Variant, P21 Crystal Form
Length = 153
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE R GDLGN+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERRVGDLGNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1CB4|A Chain A, Crystal Structure Of Copper, Zinc Superoxide Dismutase
pdb|1CB4|B Chain B, Crystal Structure Of Copper, Zinc Superoxide Dismutase
Length = 151
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 58
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +D+ RH GDLGN+ D G A + +D I L+G +SIIGR +V+
Sbjct: 59 GPHFNPLSKKHGGPKDDERHVGDLGNVTADKNGVAIVD-IVDPLISLSGEYSIIGRTMVV 117
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD GRGG+ +S TG+AG R+ACGVIG+
Sbjct: 118 HEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 149
>pdb|4A7G|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group
Length = 153
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H I GR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-TEDSVISLSGDHCITGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|2ZKW|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKW|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKX|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
Length = 159
Score = 117 bits (293), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 8 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 66
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDL N+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 67 GPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVV 125
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 126 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 157
>pdb|2VR8|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
pdb|2VR8|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
Length = 154
Score = 117 bits (293), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDL N+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVS-IEDSVISLSGDHXIIGRTLVV 120
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 121 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|3CQQ|A Chain A, Human Sod1 G85r Variant, Structure Ii
pdb|3CQQ|B Chain B, Human Sod1 G85r Variant, Structure Ii
Length = 153
Score = 117 bits (293), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDL N+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVS-IEDSVISLSGDHXIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|2VR7|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
pdb|2VR7|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
Length = 154
Score = 117 bits (293), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDL N+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVV 120
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 121 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|2VR6|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|2VR6|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|3CQP|A Chain A, Human Sod1 G85r Variant, Structure I
pdb|3CQP|B Chain B, Human Sod1 G85r Variant, Structure I
pdb|3CQP|C Chain C, Human Sod1 G85r Variant, Structure I
pdb|3CQP|D Chain D, Human Sod1 G85r Variant, Structure I
Length = 153
Score = 117 bits (293), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDL N+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1F1A|A Chain A, Crystal Structure Of Yeast H48q Cuznsod Fals Mutant Analog
Length = 154
Score = 117 bits (292), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 88/153 (57%), Gaps = 3/153 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILN-GYXXXXXXXXXXFHVHAAGDTRHECNS 92
V A+AV+ G + G G + F Q + PT ++ FH+ GD + C S
Sbjct: 2 VQAVAVLKG-DAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIQEFGDATNGCVS 60
Query: 93 AGSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIV 152
AG HFNP HG+ DE RH GD+GN+ D G A S F D+ I+L GP S++GR++V
Sbjct: 61 AGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGS-FKDSLIKLIGPTSVVGRSVV 119
Query: 153 IHKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
IH QDD G+G +S TG+AG R ACGVIGL
Sbjct: 120 IHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 152
>pdb|1P1V|A Chain A, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|B Chain B, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|C Chain C, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
Length = 153
Score = 116 bits (291), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHXIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ D G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADHLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3H2P|A Chain A, Human Sod1 D124v Variant
pdb|3H2P|B Chain B, Human Sod1 D124v Variant
Length = 153
Score = 116 bits (291), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ D G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKAVDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3GQF|A Chain A, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|B Chain B, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|C Chain C, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|D Chain D, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|E Chain E, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|F Chain F, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3K91|A Chain A, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
pdb|3K91|B Chain B, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
Length = 153
Score = 116 bits (290), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 87/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G F V GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|2NNX|A Chain A, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|B Chain B, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|C Chain C, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|D Chain D, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
Length = 154
Score = 116 bits (290), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 87/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+ V+ G +G +G I F Q +GP + G F V GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSA 61
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H IIGR +V+
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHCIIGRTLVV 120
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 121 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|1JK9|A Chain A, Heterodimer Between H48f-Ysod1 And Yccs
pdb|1JK9|C Chain C, Heterodimer Between H48f-Ysod1 And Yccs
Length = 153
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 88/153 (57%), Gaps = 3/153 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILN-GYXXXXXXXXXXFHVHAAGDTRHECNS 92
V A+AV+ G + G G + F Q + PT ++ FH+ GD + C S
Sbjct: 1 VQAVAVLKG-DAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIFEFGDATNGCVS 59
Query: 93 AGSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIV 152
AG HFNP HG+ DE RH GD+GN+ D G A S F D+ I+L GP S++GR++V
Sbjct: 60 AGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGS-FKDSLIKLIGPTSVVGRSVV 118
Query: 153 IHKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
IH QDD G+G +S TG+AG R ACGVIGL
Sbjct: 119 IHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 151
>pdb|2GBU|A Chain A, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|B Chain B, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|C Chain C, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|D Chain D, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBV|A Chain A, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|B Chain B, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|C Chain C, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|D Chain D, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|E Chain E, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|F Chain F, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|G Chain G, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|H Chain H, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|I Chain I, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|J Chain J, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+AV+ G +G +G I F Q +GP + G FHVH GD SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGATSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H+IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHAIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+A GVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLAAGVIGI 151
>pdb|1F18|A Chain A, Crystal Structure Of Yeast Copper-Zinc Superoxide
Dismutase Mutant Gly85arg
Length = 154
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 88/153 (57%), Gaps = 3/153 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILN-GYXXXXXXXXXXFHVHAAGDTRHECNS 92
V A+AV+ G + G G + F Q + PT ++ FH+H GD + C S
Sbjct: 2 VQAVAVLKG-DAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVS 60
Query: 93 AGSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIV 152
AG HFNP HG+ DE RH GD+ N+ D G A S F D+ I+L GP S++GR++V
Sbjct: 61 AGPHFNPFKKTHGAPTDEVRHVGDMRNVKTDENGVAKGS-FKDSLIKLIGPTSVVGRSVV 119
Query: 153 IHKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
IH QDD G+G +S TG+AG R ACGVIGL
Sbjct: 120 IHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 152
>pdb|1F1D|A Chain A, Crystal Structure Of Yeast H46c Cuznsod Mutant
Length = 154
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 88/153 (57%), Gaps = 3/153 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILN-GYXXXXXXXXXXFHVHAAGDTRHECNS 92
V A+AV+ G + G G + F Q + PT ++ F +H GD + C S
Sbjct: 2 VQAVAVLKG-DAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFCIHEFGDATNGCVS 60
Query: 93 AGSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIV 152
AG HFNP HG+ DE RH GD+GN+ D G A S F D+ I+L GP S++GR++V
Sbjct: 61 AGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGS-FKDSLIKLIGPTSVVGRSVV 119
Query: 153 IHKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
IH QDD G+G +S TG+AG R ACGVIGL
Sbjct: 120 IHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 152
>pdb|1B4T|A Chain A, H48c Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM TEMPERATURE
(298k) Structure
Length = 153
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 88/153 (57%), Gaps = 3/153 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILN-GYXXXXXXXXXXFHVHAAGDTRHECNS 92
V A+AV+ G + G G + F Q + PT ++ FH+ GD + C S
Sbjct: 1 VQAVAVLKG-DAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHICEFGDATNGCVS 59
Query: 93 AGSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIV 152
AG HFNP HG+ DE RH GD+GN+ D G A S F D+ I+L GP S++GR++V
Sbjct: 60 AGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGS-FKDSLIKLIGPTSVVGRSVV 118
Query: 153 IHKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
IH QDD G+G +S TG+AG R ACGVIGL
Sbjct: 119 IHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 151
>pdb|1XSO|A Chain A, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
pdb|1XSO|B Chain B, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
Length = 150
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 86/151 (56%), Gaps = 4/151 (2%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
V A+ V+ G G KG + F Q D G + G FH+H GD + C SA
Sbjct: 1 VKAVCVLAGS-GDVKGVVHFEQQ-DEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSA 58
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
GSHFNP N HG+ D RH GDLGN+ + G D+ I L GP+SIIGR V+
Sbjct: 59 GSHFNPENKNHGAPGDTDRHVGDLGNVTAE--GGVAQFKITDSLISLKGPNSIIGRTAVV 116
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIG 184
H+ DD G+GG+++S TG+AG R+ACGVIG
Sbjct: 117 HEKADDLGKGGNDESLKTGNAGGRLACGVIG 147
>pdb|2XJL|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Cu
Ligands
Length = 153
Score = 113 bits (283), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 87/152 (57%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+AV+ G +G +G I F Q +GP + G F V D C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFSVSEEEDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G HFNP + HG +DE RH GDLGN+ D G A +S D+ I L+G H+IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVS-IEDSVISLSGDHAIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 SEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|2E46|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
Length = 157
Score = 113 bits (283), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Query: 36 AIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGS 95
AIAV++ +G+I F Q D G + G FHVH GD C S GS
Sbjct: 11 AIAVLSTET--IRGNITFTQVQD-GKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGS 67
Query: 96 HFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVIHK 155
HFNP + HG D +RH GDLGN++ D + + +D++I L+GPH IIGRA+V+H+
Sbjct: 68 HFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRID-LVDDQISLSGPHGIIGRAVVLHE 126
Query: 156 DQDDFGRGGHNDSKSTGHAGERIACGVIGLL 186
DD+G+ H DS+ TG+AG R+ACGVIG+L
Sbjct: 127 KADDYGKSDHPDSRKTGNAGGRVACGVIGIL 157
>pdb|2E47|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
pdb|2E47|B Chain B, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
Length = 156
Score = 113 bits (282), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Query: 36 AIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGS 95
AIAV++ +G+I F Q D G + G FHVH GD C S GS
Sbjct: 10 AIAVLSTET--IRGNITFTQVQD-GKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGS 66
Query: 96 HFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVIHK 155
HFNP + HG D +RH GDLGN++ D + + +D++I L+GPH IIGRA+V+H+
Sbjct: 67 HFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRID-LVDDQISLSGPHGIIGRAVVLHE 125
Query: 156 DQDDFGRGGHNDSKSTGHAGERIACGVIGLL 186
DD+G+ H DS+ TG+AG R+ACGVIG+L
Sbjct: 126 KADDYGKSDHPDSRKTGNAGGRVACGVIGIL 156
>pdb|3HFF|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Zn
Ligands
Length = 153
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Query: 34 VNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 93
A+AV+ G +G +G I F Q +GP + G FHVH D C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSA 60
Query: 94 GSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVI 153
G FNP + G +DE R G LGN+ D G A +S D+ I L+G H+IIGR +V+
Sbjct: 61 GPSFNPLSRKSGGPKDEERSVGSLGNVTADKDGVADVS-IEDSVISLSGDHAIIGRTLVV 119
Query: 154 HKDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
H+ DD G+GG+ +S TG+AG R+ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3KBE|A Chain A, Metal-Free C. Elegans Cu,Zn Superoxide Dismutase
pdb|3KBF|A Chain A, C. Elegans Cu,Zn Superoxide Dismutase
Length = 157
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 6/155 (3%)
Query: 36 AIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGS 95
A+AV+ G G+I+ Q ++ ++ G FHVH GD+ + C SAG
Sbjct: 4 AVAVLRGET--VTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGP 61
Query: 96 HFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVIHK 155
HFNP HG + E RH GDLGN+ G A + D + L GP++++GR++V+H
Sbjct: 62 HFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIK-LTDTLVTLYGPNTVVGRSMVVHA 120
Query: 156 DQDDFGRG---GHNDSKSTGHAGERIACGVIGLLS 187
QDD G G +SK TG+AG R ACGVI L +
Sbjct: 121 GQDDLGEGVGDKAEESKKTGNAGARAACGVIALAA 155
>pdb|1DO5|A Chain A, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|B Chain B, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|C Chain C, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|D Chain D, Human Copper Chaperone For Superoxide Dismutase Domain Ii
Length = 154
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 5/152 (3%)
Query: 32 NKVNAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECN 91
+ A I G G +G + F Q ++ G HVH GD + CN
Sbjct: 1 QNLGAAVAILGGPGTVQGVVRFLQLTPE-RCLIEGTIDGLEPGLHGLHVHQYGDLTNNCN 59
Query: 92 SAGSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAI 151
S G+HFNP HG +D RH GDLGN+ D G A D ++++ +IGR++
Sbjct: 60 SCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIF-RMEDEQLKVW---DVIGRSL 115
Query: 152 VIHKDQDDFGRGGHNDSKSTGHAGERIACGVI 183
+I + +DD GRGGH SK TG++GER+ACG+I
Sbjct: 116 IIDEGEDDLGRGGHPLSKITGNSGERLACGII 147
>pdb|2JLP|A Chain A, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|B Chain B, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|C Chain C, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|D Chain D, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase
Length = 222
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 39 VITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGSHFN 98
V+ R+ P+ + F L G+ HVH GD C S G H+N
Sbjct: 63 VVLFRQLAPRAKLDAF-------FALEGFPTEPNSSSRAIHVHQFGDLSQGCESTGPHYN 115
Query: 99 PHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVIHKDQD 158
P + H +H GD GN V + + L GPHSI+GRA+V+H +D
Sbjct: 116 PLAVPH------PQHPGDFGNFAV--RDGSLWRYRAGLAASLAGPHSIVGRAVVVHAGED 167
Query: 159 DFGRGGHNDSKSTGHAGERIACGVIGL 185
D GRGG+ S G+AG R+AC V+G+
Sbjct: 168 DLGRGGNQASVENGNAGRRLACCVVGV 194
>pdb|1XTM|B Chain B, Crystal Structure Of The Double Mutant Y88h-p104h Of A
Sod-like Protein From Bacillus Subtilis.
pdb|1XTM|A Chain A, Crystal Structure Of The Double Mutant Y88h-p104h Of A
Sod-like Protein From Bacillus Subtilis
Length = 175
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 64/149 (42%), Gaps = 11/149 (7%)
Query: 40 ITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGD-TRHECNSAGSHFN 98
+ REG G I + D G I FH+H G R + SAG HFN
Sbjct: 26 LVNREGKAVGFIEIKESDDEGLDIHISANSLRPGASLGFHIHEKGSCVRPDFESAGGHFN 85
Query: 99 PHNMLHGSKEDEHRHAGDLGNLIVDVYGNA-YLSHFLDNKIRLTGPHSII---GRAIVIH 154
P N HG HAGDL NL V G + + D ++ +I+ G A +IH
Sbjct: 86 PLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDEDGSAFIIH 145
Query: 155 KDQDDFGRGGHNDSKSTGHAGERIACGVI 183
+ DD+ + +G++G RI CG +
Sbjct: 146 EQADDYL------TNPSGNSGARIVCGAL 168
>pdb|1XTL|B Chain B, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|A Chain A, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|C Chain C, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|D Chain D, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis
Length = 175
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 64/149 (42%), Gaps = 11/149 (7%)
Query: 40 ITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGD-TRHECNSAGSHFN 98
+ REG G I + D G I FH++ G R + SAG HFN
Sbjct: 26 LVNREGKAVGFIEIKESDDEGLDIHISANSLRPGASLGFHIYEKGSCVRPDFESAGGHFN 85
Query: 99 PHNMLHGSKEDEHRHAGDLGNLIVDVYGNA-YLSHFLDNKIRLTGPHSII---GRAIVIH 154
P N HG HAGDL NL V G + + D ++ +I+ G A +IH
Sbjct: 86 PLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDEDGSAFIIH 145
Query: 155 KDQDDFGRGGHNDSKSTGHAGERIACGVI 183
+ DD+ + +G++G RI CG +
Sbjct: 146 EQADDYL------TNPSGNSGARIVCGAL 168
>pdb|4BCZ|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form.
pdb|4BCZ|B Chain B, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form
Length = 110
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 45/151 (29%)
Query: 35 NAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAG 94
A+AV+ G +G +G I F Q +GP + G FHVH AG
Sbjct: 3 KAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHGAG---------- 51
Query: 95 SHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVIH 154
GDLGN+ D G A +S D+ I L+G HSIIGR +V+H
Sbjct: 52 --------------------GDLGNVTADKDGVADVS-IEDSVISLSGDHSIIGRTLVVH 90
Query: 155 KDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
+ K+ AG R+A GVIG+
Sbjct: 91 E-------------KAGAGAGSRLASGVIGI 108
>pdb|4BD4|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|B Chain B, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|C Chain C, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|D Chain D, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|E Chain E, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|F Chain F, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|G Chain G, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|H Chain H, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|I Chain I, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
Length = 110
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 45/151 (29%)
Query: 35 NAIAVITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAG 94
A+AV+ G +G +G I F Q +GP + G FHVH AG
Sbjct: 3 KAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLFGFHVHGAG---------- 51
Query: 95 SHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAIVIH 154
GDLGN+ D G A +S D+ I L+G HSIIGR +V+H
Sbjct: 52 --------------------GDLGNVTADKDGVADVS-IEDSVISLSGDHSIIGRTLVVH 90
Query: 155 KDQDDFGRGGHNDSKSTGHAGERIACGVIGL 185
+ K+ AG R+A GVIG+
Sbjct: 91 E-------------KAGAGAGSRLASGVIGI 108
>pdb|1U3N|A Chain A, A Sod-Like Protein From B. Subtilis, Unstructured In
Solution, Becomes Ordered In The Crystal: Implications
For Function And For Fibrillogenesis
Length = 162
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 63/149 (42%), Gaps = 11/149 (7%)
Query: 40 ITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGD-TRHECNSAGSHFN 98
+ REG G I + D G I FH++ G R + SAG FN
Sbjct: 13 LVNREGKAVGFIEIKESDDEGLDIHISANSLRPGASLGFHIYEKGSCVRPDFESAGGPFN 72
Query: 99 PHNMLHGSKEDEHRHAGDLGNLIVDVYGNA-YLSHFLDNKIRLTGPHSII---GRAIVIH 154
P N HG HAGDL NL V G + + D ++ +I+ G A +IH
Sbjct: 73 PLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDEDGSAFIIH 132
Query: 155 KDQDDFGRGGHNDSKSTGHAGERIACGVI 183
+ DD+ + +G++G RI CG +
Sbjct: 133 EQADDYL------TNPSGNSGARIVCGAL 155
>pdb|1S4I|B Chain B, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|A Chain A, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|C Chain C, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|D Chain D, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
Length = 175
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 63/149 (42%), Gaps = 11/149 (7%)
Query: 40 ITGREGGPKGSIFFFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGD-TRHECNSAGSHFN 98
+ REG G I + D G I FH++ G R + SAG FN
Sbjct: 26 LVNREGKAVGFIEIKESDDEGLDIHISANSLRPGASLGFHIYEKGSCVRPDFESAGGPFN 85
Query: 99 PHNMLHGSKEDEHRHAGDLGNLIVDVYGNA-YLSHFLDNKIRLTGPHSII---GRAIVIH 154
P N HG HAGDL NL V G + + D ++ +I+ G A +IH
Sbjct: 86 PLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDEDGSAFIIH 145
Query: 155 KDQDDFGRGGHNDSKSTGHAGERIACGVI 183
+ DD+ + +G++G RI CG +
Sbjct: 146 EQADDYL------TNPSGNSGARIVCGAL 168
>pdb|1ESO|A Chain A, Monomeric Cu,Zn Superoxide Dismutase From Escherichia Coli
Length = 154
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 15/114 (13%)
Query: 78 FHVHAAGDTR--------HECNSAGSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAY 129
FH+HA G + SAG H +P N + H GDL L+V+ G A
Sbjct: 47 FHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPALVVNNDGKAT 106
Query: 130 LSHFLDNKIRLTGPHSIIGRAIVIHKDQDDFGRGGHNDSKSTGHAGERIACGVI 183
+ RL I +A+++H D+ + K G GER ACGVI
Sbjct: 107 DAVIAP---RLKSLDEIKDKALMVHVGGDNM----SDQPKPLGGGGERYACGVI 153
>pdb|1YAI|A Chain A, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
pdb|1YAI|B Chain B, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
pdb|1YAI|C Chain C, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
Length = 151
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 92 SAGSHFNP-HNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRA 150
+AG H++P H HG + H GDL L V G A + L ++ L + G A
Sbjct: 66 AAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLAT-NPVLAPRLTLK---ELKGHA 121
Query: 151 IVIHKDQDDFGRGGHND-SKSTGHAGERIACGVI 183
I+IH D+ H+D K+ G G R+ACGVI
Sbjct: 122 IMIHAGGDN-----HSDMPKALGGGGARVACGVI 150
>pdb|1IBD|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant V29a
Length = 151
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 92 SAGSHFNP-HNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRA 150
+AG H++P H HG + H GDL L V G A + L ++ L + G A
Sbjct: 66 AAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLAT-NPVLAPRLTLK---ELKGHA 121
Query: 151 IVIHKDQDDFGRGGHND-SKSTGHAGERIACGVI 183
I+IH D+ H+D K+ G G R+ACGVI
Sbjct: 122 IMIHAGGDN-----HSDMPKALGGGGARVACGVI 150
>pdb|1IBF|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant V29g
Length = 151
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 92 SAGSHFNP-HNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRA 150
+AG H++P H HG + H GDL L V G A + L ++ L + G A
Sbjct: 66 AAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLAT-NPVLAPRLTLK---ELKGHA 121
Query: 151 IVIHKDQDDFGRGGHND-SKSTGHAGERIACGVI 183
I+IH D+ H+D K+ G G R+ACGVI
Sbjct: 122 IMIHAGGDN-----HSDMPKALGGGGARVACGVI 150
>pdb|1BZO|A Chain A, Three-Dimensional Structure Of Prokaryotic Cu,Zn
Superoxide Dismutase From P.Leiognathi, Solved By X-Ray
Crystallography
Length = 151
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 92 SAGSHFNP-HNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRA 150
+AG H++P H HG + H GDL L V G A + L ++ L + G A
Sbjct: 66 AAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLAT-NPVLAPRLTLK---ELKGHA 121
Query: 151 IVIHKDQDDFGRGGHND-SKSTGHAGERIACGVI 183
I+IH D+ H+D K+ G G R+ACGVI
Sbjct: 122 IMIHAGGDN-----HSDMPKALGGGGARVACGVI 150
>pdb|1IBH|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant M41i
Length = 151
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 92 SAGSHFNP-HNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRA 150
+AG H++P H HG + H GDL L V G A + L ++ L + G A
Sbjct: 66 AAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLAT-NPVLAPRLTLK---ELKGHA 121
Query: 151 IVIHKDQDDFGRGGHND-SKSTGHAGERIACGVI 183
I+IH D+ H+D K+ G G R+ACGVI
Sbjct: 122 IMIHAGGDN-----HSDMPKALGGGGARVACGVI 150
>pdb|1OAL|A Chain A, Active Site Copper And Zinc Ions Modulate The Quaternary
Structure Of Prokaryotic Cu,Zn Superoxide Dismutase
Length = 151
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 92 SAGSHFNP-HNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRA 150
+AG H++P H HG + H GDL L V G A + L ++ L + G A
Sbjct: 66 AAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLAT-NPVLAPRLTLK---ELKGHA 121
Query: 151 IVIHKDQDDFGRGGHND-SKSTGHAGERIACGVI 183
I+IH D+ H+D K+ G G R+ACGVI
Sbjct: 122 IMIHAGGDN-----HSDMPKALGGGGARVACGVI 150
>pdb|1OAJ|A Chain A, Active Site Copper And Zinc Ions Modulate The Quaternary
Structure Of Prokaryotic Cu,Zn Superoxide Dismutase
Length = 151
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 92 SAGSHFNP-HNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRA 150
+AG H++P H HG + H GDL L V G A + L ++ L + G A
Sbjct: 66 AAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLAT-NPVLAPRLTLK---ELKGHA 121
Query: 151 IVIHKDQDDFGRGGHND-SKSTGHAGERIACGVI 183
I+IH D+ H+D K+ G G R+ACGVI
Sbjct: 122 IMIHAGGDN-----HSDMPKALGGGGARVACGVI 150
>pdb|1IB5|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant W83y
Length = 151
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 92 SAGSHFNP-HNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRA 150
+AG H++P H HG + H GDL L V G A + L ++ L + G A
Sbjct: 66 AAGGHYDPEHTNKHGFPYTDDNHKGDLPALFVSANGLA-TNPVLAPRLTLK---ELKGHA 121
Query: 151 IVIHKDQDDFGRGGHND-SKSTGHAGERIACGVI 183
I+IH D+ H+D K+ G G R+ACGVI
Sbjct: 122 IMIHAGGDN-----HSDMPKALGGGGARVACGVI 150
>pdb|1IBB|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant W83f
Length = 151
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 92 SAGSHFNP-HNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRA 150
+AG H++P H HG + H GDL L V G A + L ++ L + G A
Sbjct: 66 AAGGHYDPEHTNKHGFPFTDDNHKGDLPALFVSANGLAT-NPVLAPRLTLK---ELKGHA 121
Query: 151 IVIHKDQDDFGRGGHND-SKSTGHAGERIACGVI 183
I+IH D+ H+D K+ G G R+ACGVI
Sbjct: 122 IMIHAGGDN-----HSDMPKALGGGGARVACGVI 150
>pdb|2K4W|A Chain A, The Solution Structure Of The Monomeric Copper, Zinc
Superox Dismutase From Salmonella Enterica
Length = 154
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 78 FHVHAAGDTRHE--------CNSAGSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAY 129
FH+HA G + +AG H +P N K + G LG+L V V N
Sbjct: 47 FHIHANGSCQPAIKDGQAVAAEAAGGHLDPQNT---GKHEGPEGQGHLGDLPVLVVNNDG 103
Query: 130 LSHFLDNKIRLTGPHSIIGRAIVIHKDQDDFGRGGHNDSKSTGHAGERIACGVI 183
++ RL + +A++IH D+ + K G G R ACGVI
Sbjct: 104 IATEPVTAPRLKSLDEVKDKALMIHVGGDNM----SDQPKPLGGGGTRYACGVI 153
>pdb|1EQW|A Chain A, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|B Chain B, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|C Chain C, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|D Chain D, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
Length = 156
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 93 AGSHFNPHNM-LHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAI 151
AG H +P H ++ H GDL L+V+ G A RL + G ++
Sbjct: 70 AGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAP---RLKSLSELKGHSL 126
Query: 152 VIHKDQDDFGRGGHNDSKSTGHAGERIACGVI 183
+IHK D++ + G G R ACGVI
Sbjct: 127 MIHKGGDNY----SDKPAPLGGGGARFACGVI 154
>pdb|2WWN|A Chain A, Yersinia Pseudotuberculosis Superoxide Dismutase C With
Bound Azide
pdb|2WWN|B Chain B, Yersinia Pseudotuberculosis Superoxide Dismutase C With
Bound Azide
pdb|2WWO|A Chain A, Yersinia Pseudotuberculosis Superoxide Dismutase C
pdb|2WWO|B Chain B, Yersinia Pseudotuberculosis Superoxide Dismutase C
Length = 169
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 92 SAGSHFNPHNM-LHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRA 150
+AG H +P+ +H ++ H GDL L+V+ G A RL + A
Sbjct: 83 AAGGHLDPNKTGVHLGPYNDKGHLGDLPGLVVNADGTATYPVLAP---RLKSLSEVKQHA 139
Query: 151 IVIHKDQDDFGRGGHNDSKSTGHAGERIACGVI 183
++IH D++ + G G R+ACGVI
Sbjct: 140 LMIHAGGDNY----SDHPMPLGGGGARMACGVI 168
>pdb|2APS|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM ACTINOBACILLUS
Pleuropneumoniae
pdb|2APS|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM ACTINOBACILLUS
Pleuropneumoniae
Length = 162
Score = 33.9 bits (76), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 93 AGSHFNP-HNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAI 151
AG H++P HG ++ H GDL L V+ G+A RL + G ++
Sbjct: 77 AGGHWDPKETKQHGYPWSDNAHLGDLPALFVEHDGSATNPVLAP---RLKKLDEVKGHSL 133
Query: 152 VIHKDQDDFGRGGHNDSKST-GHAGERIACGVI 183
+IH+ D+ H+D + G G R+ACGVI
Sbjct: 134 MIHEGGDN-----HSDHPAPLGGGGPRMACGVI 161
>pdb|1PZS|A Chain A, Crystal Structure Of A Cu-Zn Superoxide Dismutase From
Mycobacterium Tuberculosis At 1.63 Resolution
Length = 208
Score = 33.9 bits (76), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 20/87 (22%)
Query: 114 AGDLGNLIVDVYGNAYLSHFLDNKIR---LTGPHSIIGRAIVIHKDQDDF---------- 160
+GDL +L V G+A L D L+G + AI+IH D+F
Sbjct: 124 SGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKT----AIIIHAGADNFANIPPERYVQ 179
Query: 161 --GRGGHNDSK-STGHAGERIACGVIG 184
G G +++ +TG AG+R+ACGVIG
Sbjct: 180 VNGTPGPDETTLTTGDAGKRVACGVIG 206
>pdb|1Z9P|A Chain A, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi
pdb|1Z9P|B Chain B, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi
Length = 155
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 93 AGSHFNP-HNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAI 151
AG H++P HG + H GDL L V G+A +L + G ++
Sbjct: 70 AGGHWDPKQTQKHGYPWSDDAHMGDLPALFVMHDGSATTPVLAPRLKKLA---EVKGHSL 126
Query: 152 VIHKDQDDFGRGGHNDSKST-GHAGERIACGVI 183
+IH D+ H+D + G G R+ACGVI
Sbjct: 127 MIHAGGDN-----HSDHPAPLGGGGPRMACGVI 154
>pdb|2AQM|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM BRUCELLA ABORTUS
Length = 154
Score = 33.1 bits (74), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 92 SAGSHFNPHNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAI 151
+AG H++P N H + H GDL L + G + + +L I R++
Sbjct: 69 AAGGHYDPGNTHHHLGPEGDGHMGDLPRLSANADGKVSETVVAPHLKKLA---EIKQRSL 125
Query: 152 VIHKDQDDFGRGGHNDSKSTGHAGERIACGVI 183
++H D++ + + G G R ACGVI
Sbjct: 126 MVHVGGDNYS----DKPEPLGGGGARFACGVI 153
>pdb|1Z9N|A Chain A, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
pdb|1Z9N|B Chain B, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
pdb|1Z9N|C Chain C, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
pdb|1Z9N|D Chain D, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
Length = 177
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 93 AGSHFNP-HNMLHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAI 151
AG H++P HG + H GDL L V G+A +L + G ++
Sbjct: 92 AGGHWDPKQTQKHGYPWSDDAHMGDLPALFVMHDGSATTPVLAPRLKKLA---EVKGHSL 148
Query: 152 VIHKDQDDFGRGGHNDSKST-GHAGERIACGVI 183
+IH D+ H+D + G G R+ACGVI
Sbjct: 149 MIHAGGDN-----HSDHPAPLGGGGPRMACGVI 176
>pdb|2AQN|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
pdb|2AQN|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
pdb|2AQN|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
Length = 164
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 93 AGSHFNPHNM-LHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAI 151
AG H++P HG + H GDL L V G A RL + G +I
Sbjct: 79 AGGHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAP---RLKHLDDVRGHSI 135
Query: 152 VIHKDQDDFGRGGHNDSKST-GHAGERIACGVI 183
+IH D+ H+D + G G R+ACGVI
Sbjct: 136 MIHTGGDN-----HSDHPAPLGGGGPRMACGVI 163
>pdb|2AQP|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS E73A
MUTANT
pdb|2AQP|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS E73A
MUTANT
Length = 164
Score = 30.0 bits (66), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 93 AGSHFNPHNM-LHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAI 151
AG H++P HG + H GDL L V G A RL + G +I
Sbjct: 79 AGGHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAP---RLKHLDDVRGHSI 135
Query: 152 VIHKDQDDFGRGGHNDSKST-GHAGERIACGVI 183
+IH D+ H+D + G G R+ACGVI
Sbjct: 136 MIHTGGDN-----HSDHPAPLGGGGPRMACGVI 163
>pdb|2AQR|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
pdb|2AQR|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
pdb|2AQR|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
Length = 164
Score = 30.0 bits (66), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 93 AGSHFNPHNM-LHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAI 151
AG H++P HG + H GDL L V G A RL + G +I
Sbjct: 79 AGGHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAP---RLKHLDDVRGHSI 135
Query: 152 VIHKDQDDFGRGGHNDSKST-GHAGERIACGVI 183
+IH D+ H+D + G G R+ACGVI
Sbjct: 136 MIHTGGDN-----HSDHPAPLGGGGPRMACGVI 163
>pdb|2AQQ|A Chain A, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
pdb|2AQQ|B Chain B, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
pdb|2AQQ|C Chain C, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
Length = 164
Score = 30.0 bits (66), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 93 AGSHFNPHNM-LHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAI 151
AG H++P HG + H GDL L V G A RL + G +I
Sbjct: 79 AGGHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAP---RLKHLDDVRGHSI 135
Query: 152 VIHKDQDDFGRGGHNDSKST-GHAGERIACGVI 183
+IH D+ H+D + G G R+ACGVI
Sbjct: 136 MIHTGGDN-----HSDHPAPLGGGGPRMACGVI 163
>pdb|2AQT|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
pdb|2AQT|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
pdb|2AQT|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
Length = 164
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 93 AGSHFNPHNM-LHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAI 151
AG H++P HG + H GDL L V G A RL + G +I
Sbjct: 79 AGGHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVL---APRLKHLDDVRGHSI 135
Query: 152 VIHKDQDDFGRGGHNDSKST-GHAGERIACGVI 183
+IH D+ H+D + G G R+ACGVI
Sbjct: 136 MIHTGGDN-----HSDHPAPLGGGGPRMACGVI 163
>pdb|2AQS|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91E, K94e Double Mutant
pdb|2AQS|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91E, K94e Double Mutant
Length = 164
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 93 AGSHFNPHNM-LHGSKEDEHRHAGDLGNLIVDVYGNAYLSHFLDNKIRLTGPHSIIGRAI 151
AG H++P HG + H GDL L V G A RL + G +I
Sbjct: 79 AGGHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVL---APRLKHLDDVRGHSI 135
Query: 152 VIHKDQDDFGRGGHNDSKST-GHAGERIACGVI 183
+IH D+ H+D + G G R+ACGVI
Sbjct: 136 MIHTGGDN-----HSDHPAPLGGGGPRMACGVI 163
>pdb|3ETS|A Chain A, Crystal Structure Of A Bacterial Arylsulfate
Sulfotransferase Catalytic Intermediate With 4-
Methylumbelliferone Bound In The Active Site
pdb|3ETS|B Chain B, Crystal Structure Of A Bacterial Arylsulfate
Sulfotransferase Catalytic Intermediate With 4-
Methylumbelliferone Bound In The Active Site
pdb|3ETT|A Chain A, Crystal Structure Of A Bacterial Arylsulfate
Sulfotransferase Catalytic Intermediate With
4-Nitrophenol Bound In The Active Site
pdb|3ETT|B Chain B, Crystal Structure Of A Bacterial Arylsulfate
Sulfotransferase Catalytic Intermediate With
4-Nitrophenol Bound In The Active Site
Length = 571
Score = 28.5 bits (62), Expect = 2.2, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 114 AGDLGNLIVDVYGNAYLSHFLD 135
AG LG +IVD YGNA L+ +D
Sbjct: 9 AGQLGAVIVDPYGNAPLTALVD 30
>pdb|3ELQ|A Chain A, Crystal Structure Of A Bacterial Arylsulfate
Sulfotransferase
pdb|3ELQ|B Chain B, Crystal Structure Of A Bacterial Arylsulfate
Sulfotransferase
Length = 571
Score = 28.5 bits (62), Expect = 2.3, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 114 AGDLGNLIVDVYGNAYLSHFLD 135
AG LG +IVD YGNA L+ +D
Sbjct: 9 AGQLGAVIVDPYGNAPLTALVD 30
>pdb|3LYX|A Chain A, Crystal Structure Of The Pas Domain Of The Protein
Cps_1291 From Colwellia Psychrerythraea. Northeast
Structural Genomics Consortium Target Id Csr222b
pdb|3LYX|B Chain B, Crystal Structure Of The Pas Domain Of The Protein
Cps_1291 From Colwellia Psychrerythraea. Northeast
Structural Genomics Consortium Target Id Csr222b
Length = 124
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 28/79 (35%), Gaps = 2/79 (2%)
Query: 53 FFQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGSHFNPHNMLHGSKEDEHR 112
F D + G L GY +H GDT H + S G H+
Sbjct: 28 FIIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGKWTGEIRMLHK 87
Query: 113 --HAGDLGNLIVDVYGNAY 129
H G + ++ V +YG Y
Sbjct: 88 DGHIGWIESMCVPIYGENY 106
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,131,594
Number of Sequences: 62578
Number of extensions: 258098
Number of successful extensions: 640
Number of sequences better than 100.0: 118
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 447
Number of HSP's gapped (non-prelim): 121
length of query: 188
length of database: 14,973,337
effective HSP length: 93
effective length of query: 95
effective length of database: 9,153,583
effective search space: 869590385
effective search space used: 869590385
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)