Your job contains 1 sequence.
>046450
MFSLICKTLIEKPGSIDLKISYARNLKTIIPSVNSISKPSDERSPTVSFLTHSCGLSLEK
AISVSKLVKIQDTEKPNSSIQLLTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLE
SLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNLVYALKQSIRVVNSDI
QKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMGFEPSSKSFIL
AVRSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKIG
LEPSDIARYPNLLIGSLEKKVLPRWSVLQVLMSKNLLKKDVNVSLALFVTKEVFERRFVT
SYMHEPEVMTAYQGGLGVQAVGGGVGAELSQT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046450
(392 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2142763 - symbol:AT5G07900 "AT5G07900" species... 585 7.5e-57 1
TAIR|locus:2199612 - symbol:AT1G21150 "AT1G21150" species... 527 1.1e-50 1
TAIR|locus:2177734 - symbol:AT5G64950 "AT5G64950" species... 388 5.7e-36 1
TAIR|locus:2018042 - symbol:AT1G62110 "AT1G62110" species... 343 3.3e-31 1
TAIR|locus:2102827 - symbol:AT3G46950 "AT3G46950" species... 333 3.8e-30 1
TAIR|locus:2036843 - symbol:AT1G61960 "AT1G61960" species... 329 1.0e-29 1
TAIR|locus:2036858 - symbol:AT1G61970 "AT1G61970" species... 321 7.1e-29 1
TAIR|locus:1006230704 - symbol:AT1G62085 "AT1G62085" spec... 320 9.1e-29 1
TAIR|locus:2036878 - symbol:AT1G61990 "AT1G61990" species... 315 3.1e-28 1
TAIR|locus:2172798 - symbol:AT5G23930 "AT5G23930" species... 305 4.6e-27 1
TAIR|locus:2036868 - symbol:AT1G61980 "AT1G61980" species... 303 5.7e-27 1
TAIR|locus:2018057 - symbol:AT1G62120 "AT1G62120" species... 290 1.8e-25 1
TAIR|locus:2036813 - symbol:AT1G62010 "AT1G62010" species... 242 2.1e-18 1
TAIR|locus:2018062 - symbol:AT1G62150 "AT1G62150" species... 239 7.7e-18 1
TAIR|locus:2010698 - symbol:AT1G56380 "AT1G56380" species... 218 1.5e-15 1
TAIR|locus:2207265 - symbol:AT1G79220 species:3702 "Arabi... 210 1.3e-14 1
TAIR|locus:2051814 - symbol:AT2G44020 "AT2G44020" species... 186 1.4e-11 1
TAIR|locus:2153433 - symbol:PTAC15 "AT5G54180" species:37... 173 3.9e-10 1
TAIR|locus:2139394 - symbol:BSM "AT4G02990" species:3702 ... 171 7.5e-10 1
TAIR|locus:2049329 - symbol:EMB2219 "embryo defective 221... 176 1.0e-09 2
TAIR|locus:2056745 - symbol:EMB93 "EMBRYO DEFECTIVE 93" s... 158 4.4e-09 1
TAIR|locus:505006461 - symbol:MDA1 "AT4G14605" species:37... 161 8.3e-09 1
TAIR|locus:2062328 - symbol:AT2G34620 "AT2G34620" species... 143 3.1e-07 1
TAIR|locus:2037338 - symbol:AT1G74120 "AT1G74120" species... 146 3.3e-07 1
TAIR|locus:2203931 - symbol:AT1G62490 "AT1G62490" species... 140 8.7e-07 1
TAIR|locus:2162092 - symbol:AT5G55580 "AT5G55580" species... 142 1.1e-06 1
TAIR|locus:2207420 - symbol:AT1G78930 "AT1G78930" species... 136 6.7e-06 1
UNIPROTKB|G3MZI9 - symbol:MTERF "Uncharacterized protein"... 130 1.4e-05 1
UNIPROTKB|Q99551 - symbol:MTERF "Transcription terminatio... 130 1.6e-05 1
TAIR|locus:2087926 - symbol:AT3G18870 "AT3G18870" species... 92 2.0e-05 2
UNIPROTKB|F1S318 - symbol:MTERF "Uncharacterized protein"... 129 2.6e-05 1
MGI|MGI:1918240 - symbol:Mterf "mitochondrial transcripti... 125 5.4e-05 1
UNIPROTKB|Q5R9U8 - symbol:MTERF "Transcription terminatio... 122 0.00013 1
RGD|621318 - symbol:Mterf "mitochondrial transcription te... 115 0.00069 1
>TAIR|locus:2142763 [details] [associations]
symbol:AT5G07900 "AT5G07900" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016020 "membrane" evidence=IDA] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016020 EMBL:AL133421 EMBL:AB005249
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
eggNOG:NOG320618 HOGENOM:HOG000093133 UniGene:At.32655
UniGene:At.626 EMBL:AF370295 EMBL:AY063042 EMBL:AY086199
IPI:IPI00534486 PIR:T45615 RefSeq:NP_568185.1
ProteinModelPortal:Q9SD94 PaxDb:Q9SD94 PRIDE:Q9SD94 DNASU:830684
EnsemblPlants:AT5G07900.1 GeneID:830684 KEGG:ath:AT5G07900
TAIR:At5g07900 InParanoid:Q9SD94 OMA:HCMMLSE PhylomeDB:Q9SD94
ProtClustDB:CLSN2689534 ArrayExpress:Q9SD94 Genevestigator:Q9SD94
Uniprot:Q9SD94
Length = 405
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 125/348 (35%), Positives = 207/348 (59%)
Query: 28 TIIPSVNSISKPSDER-SPTVSFLTHSCGLSLEKAISVSKLVKIQDTEKPNSSIQLLTSR 86
T + S N ++ S T+++L SCGLS + A S+ + + E+PN+ + LL
Sbjct: 52 TTLTSKNPKDDEQQQKLSFTLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDH 111
Query: 87 GFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLEN 146
GFT QI++L+ K P +L + E VL PK+ + S+G+S LA+ L P +L+RSL N
Sbjct: 112 GFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVN 171
Query: 147 HIIPTFDFLKGVFQANGNLVYALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIM 206
+IP+++FLK V ++ +V AL+++ V D K +VPN+N + GVPE I L+
Sbjct: 172 QLIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLT 231
Query: 207 LQPPSLVLRAELFKNVVDVIKEMGFEPSSKSFILAVRSMA-MSSKATWQRKKEILISFGW 265
P +++ + F+ + +EMGF P +F+LA+ +++ +K+ W + E+ +GW
Sbjct: 232 HFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGW 291
Query: 266 SEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLEPSDIARYPNLLIGSLEKKVLPRW 325
SED+ FK+ P MM S +KI + M++FVN++ + P IA+ P +L SLEK+++PR
Sbjct: 292 SEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRC 351
Query: 326 SVLQVLMSKNLLKKDVNVSLALFVTKEVFERRFVTSYMHE-PEVMTAY 372
SV +VL+S L+K+D +++ L ++VF + V Y E PE+M Y
Sbjct: 352 SVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399
>TAIR|locus:2199612 [details] [associations]
symbol:AT1G21150 "AT1G21150" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 EMBL:AC012190
IPI:IPI00537251 RefSeq:NP_173539.1 UniGene:At.66877
ProteinModelPortal:Q3ED83 PaxDb:Q3ED83 PRIDE:Q3ED83
EnsemblPlants:AT1G21150.1 GeneID:838711 KEGG:ath:AT1G21150
TAIR:At1g21150 eggNOG:NOG266402 HOGENOM:HOG000093133
InParanoid:Q3ED83 OMA:LIPCYDS PhylomeDB:Q3ED83
ProtClustDB:CLSN2912662 Genevestigator:Q3ED83 Uniprot:Q3ED83
Length = 390
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 120/337 (35%), Positives = 188/337 (55%)
Query: 38 KPSDERSPTVSFLTHSCGLSLEKAISVSKLVKIQDTEKPNSSIQLLTSRGFTKPQIATLI 97
KP E S TVS+L SCGLSLE A S S+ VK+ ++KP+S + L GFT QI ++I
Sbjct: 51 KPCLE-SFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVI 109
Query: 98 SKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKG 157
+PR+LS PE V+ PK+ + S+G S D AK++ P++LS SL +IP +D LK
Sbjct: 110 KSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKS 169
Query: 158 VFQANGNLVYALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAE 217
+ ++V LK+ IR + I V ++ R GVP+ I L+ P + R
Sbjct: 170 ILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRER 229
Query: 218 LFKNVVDVIKEMGFEPSSKSFILAVRSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQ 277
F V++ + GF+P F+ A+ + +S++ +RK ++ FGWS+++F R
Sbjct: 230 RFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRF 289
Query: 278 PLFMMASAKKIRKLMDFFVNKIGLEPSDIARYPNLLIGSLEKKVLPRWSVLQVLMSKNLL 337
P + S +KI +++ VN IGL+ DI P +L S+EK++ PR V+ +L+SK L+
Sbjct: 290 PNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLV 349
Query: 338 KK-DVNVSLALFVTKEVFERRFVTSYMHE-PEVMTAY 372
KK D+N L + F +FV Y E P+++ +
Sbjct: 350 KKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPF 386
>TAIR|locus:2177734 [details] [associations]
symbol:AT5G64950 "AT5G64950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 EMBL:AB019236 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00545204
RefSeq:NP_201300.1 UniGene:At.28929 ProteinModelPortal:Q9LV83
EnsemblPlants:AT5G64950.1 GeneID:836619 KEGG:ath:AT5G64950
TAIR:At5g64950 InParanoid:Q9LV83 OMA:MSEFLIT PhylomeDB:Q9LV83
ProtClustDB:CLSN2686446 Genevestigator:Q9LV83 Uniprot:Q9LV83
Length = 391
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 102/349 (29%), Positives = 187/349 (53%)
Query: 34 NSISKPSDERSPT-VSFLTHSCGLSLEKAISVS-KLVKIQDTEKPNSSIQLLTSRGFTKP 91
+S + P+ +P V FL + G AI+++ + ++ E+P S IQ+L S F+
Sbjct: 28 SSNATPASISNPAFVEFLRDN-GFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDT 86
Query: 92 QIATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPT 151
QI I +PR++ ++ EK+L+PK+ + + +G +G L K + ++ SL +IPT
Sbjct: 87 QIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPT 146
Query: 152 FDFLKGVFQA-NGNLVYALKQ-SIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQP 209
+ LK + + +L L + +++ D ++PN++ L G+ +A L+ QP
Sbjct: 147 VEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQP 206
Query: 210 PSLVLRAELFKNVVDVIKEMGFEPSSKSFILAVRSMAMSSKATWQRKKEILISFGWSEDE 269
L E + V ++GF +S+ + AV S++ S+ T+ RK ++ ++ G+SEDE
Sbjct: 207 RIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDE 266
Query: 270 FRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLEPSDIARYPNLLIGSLEKKVLPRWSVLQ 329
+ +R P + S K+ +F++ ++GLE +A+ P +L +LEK+V+PR VLQ
Sbjct: 267 ITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQ 326
Query: 330 VLMSKNLL----KKDVNVSLALFVTKEVFERRFVTSYMHE--PEVMTAY 372
+L K LL KK N+ + +T+E F ++V + E E++ AY
Sbjct: 327 ILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEELLVAY 375
>TAIR|locus:2018042 [details] [associations]
symbol:AT1G62110 "AT1G62110" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR eggNOG:KOG1267
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000113939 ProtClustDB:CLSN2682053 EMBL:BT005380
EMBL:AK117829 IPI:IPI00522637 RefSeq:NP_176402.2 UniGene:At.36313
ProteinModelPortal:Q8GY68 PaxDb:Q8GY68 PRIDE:Q8GY68
EnsemblPlants:AT1G62110.1 GeneID:842507 KEGG:ath:AT1G62110
TAIR:At1g62110 InParanoid:Q8GY68 OMA:QFIRISE PhylomeDB:Q8GY68
Genevestigator:Q8GY68 Uniprot:Q8GY68
Length = 462
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 90/284 (31%), Positives = 157/284 (55%)
Query: 46 TVSFLTHSCGLSLEKAISVSKLVKIQDTEKPNSSIQLLTSRGFTKPQIATLISKYPRILS 105
TVS+L S GL+ + A S+SK V + P+ + L S GFT QI+++I+ YPR+L
Sbjct: 54 TVSYLVDSLGLATKLAESISKKVSFVNKGNPDLVLSLFRSYGFTNSQISSIITDYPRLLL 113
Query: 106 HDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNL 165
D EK L K+++LES G S P+L +I+ P++L + +DF+K + +A+ +
Sbjct: 114 IDAEKSLDIKLQFLESRGASSPELTQIVSTVPKILGMKEGKSLGRYYDFVKEIIEADKSS 173
Query: 166 VY-ALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIM--LQPPSLVLRAELFKNV 222
Y L Q + N K + N++ LR GVP+ + L++ QP V E F+
Sbjct: 174 KYETLCQPLPEANRQGNK--IRNVSVLRDLGVPQKLLFSLLISDAQP---VCGKENFEES 228
Query: 223 VDVIKEMGFEPSSKSFILAVRSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMM 282
+ + EMGF+P++ F+ A+R++ + T + + + FG++ ++ +FK+ P F+
Sbjct: 229 LKKVVEMGFDPTTSKFVQALRAVYRFTDKTIEERVNVYKGFGFAVEDVWAMFKKCPYFLN 288
Query: 283 ASAKKIRKLMDFFVNKIGLEPSDIA----RYPNLLIGSLEKKVL 322
+S KKI + ++ + K GL ++ +YP IG+ E+K+L
Sbjct: 289 SSEKKIGQTIET-LKKCGLLEDEVISVLKKYPQC-IGTSEQKIL 330
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 55/210 (26%), Positives = 98/210 (46%)
Query: 171 QSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMG 230
Q++R V K + +N + G + + P L + ++ +K+ G
Sbjct: 246 QALRAVYRFTDKTIEERVNVYKGFGFAVEDVWAMFKKCPYFLNSSEKKIGQTIETLKKCG 305
Query: 231 F-EPSSKSFILAVRSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIR 289
E S + +S+ EI + G+S DEF + KR P ++ SA+ ++
Sbjct: 306 LLEDEVISVLKKYPQCIGTSEQKILNSIEIFLGLGFSRDEFITMVKRFPQCLILSAETVK 365
Query: 290 KLMDFFVNKIGLEPSDIARYPNLLIGSLEKKVLPRWSVLQVLMSKNLLKKDVN----VSL 345
K ++F V K+ D+ P +L +LEK+ +PR +V++ LMSK LL + +S
Sbjct: 366 KKIEFVVKKMNWPLKDVVSNPTVLGYNLEKRTVPRCNVIEALMSKRLLGDTGSELPPMSS 425
Query: 346 ALFVTKEVFERRFVTSYMHEP---EVMTAY 372
L T E+F +R+V ++ + E+MT Y
Sbjct: 426 VLVCTDELFLKRYVRNHGDKELVLELMTIY 455
>TAIR|locus:2102827 [details] [associations]
symbol:AT3G46950 "AT3G46950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL096859
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
UniGene:At.28750 UniGene:At.48743 HOGENOM:HOG000113939
ProtClustDB:CLSN2682053 EMBL:AY045902 EMBL:AY117265 IPI:IPI00540395
PIR:T12953 RefSeq:NP_190279.1 ProteinModelPortal:Q9STG7
PaxDb:Q9STG7 PRIDE:Q9STG7 EnsemblPlants:AT3G46950.1 GeneID:823848
KEGG:ath:AT3G46950 TAIR:At3g46950 eggNOG:NOG316991
InParanoid:Q9STG7 OMA:ENPPISS PhylomeDB:Q9STG7 ArrayExpress:Q9STG7
Genevestigator:Q9STG7 Uniprot:Q9STG7
Length = 450
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 105/336 (31%), Positives = 175/336 (52%)
Query: 1 MFSLIC---KTL-IEKPGSIDLKISYARN-LKTIIPSVNS-ISKPSDERSPT--VSFLTH 52
MFSLI K++ ++K ++ + +S +N S +S I+K S + T VS+L
Sbjct: 1 MFSLILHGRKSVELQKWRNLRVTVSIVQNAFPFTTKSFSSTIAKDSSPKGSTFTVSYLVE 60
Query: 53 SCGLSLEKAISVSKLVKIQDTEKPNSSIQLLTSRGFTKPQIATLISKYPRILSHDPEKVL 112
S GL+ + A ++SK V +D P+S + LL S GF QI+ +I YPR+L D EK L
Sbjct: 61 SLGLTKKLAETISKKVTFEDKVNPDSVLNLLRSNGFKDSQISRIIRAYPRLLVTDAEKSL 120
Query: 113 KPKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNLVYALKQS 172
+PK+++L+S G S ++ +I+ P +L + E + +DF+K + Q +L + +
Sbjct: 121 RPKLQFLKSRGASSSEVIEIVSNVPTILDKKGEESVSLYYDFVKDIMQDGKSLCISCPEG 180
Query: 173 IRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIM--LQPPSLVLRAELFKNVVDVIKEMG 230
+ + I+ N++ LR GVP+ + L++ QP V E F+ + + +MG
Sbjct: 181 KK--GNRIR-----NISVLRELGVPQKLLFSLLISRYQP---VCGKEKFEESLKKVVDMG 230
Query: 231 FEPSSKSFILAVRSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRK 290
F+P+ F+ A+ + S+ T + K + G+SE E +FK+ P F+ S KKI
Sbjct: 231 FDPAKSKFVEALHVVYEMSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKII- 289
Query: 291 LMDFFVNKIGLEPSDIARY----PNLLIGSLEKKVL 322
LM + K GL +I P I S E+K+L
Sbjct: 290 LMFETLKKCGLVEEEIISVLKSRPQC-IRSSEQKIL 324
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 50/205 (24%), Positives = 95/205 (46%)
Query: 171 QSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMG 230
+++ VV +K + +N + G E I + P L + + + +K+ G
Sbjct: 240 EALHVVYEMSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCG 299
Query: 231 FEPSSKSFILAVRSMAM-SSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIR 289
+L R + SS+ E+ + G+S D+F+M+ KR P S + +R
Sbjct: 300 LVEEEIISVLKSRPQCIRSSEQKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLR 359
Query: 290 KLMDFFVNKIGLEPSDIARYPNLLIGSLEKKVLPRWSVLQVLMSKNLL-KKDVNVSLALF 348
K + V + + P +L SLEK+++PR +V++ LMSK L+ ++ +S L
Sbjct: 360 KKFEVLVKMMNWPLEAVVMIPTVLGYSLEKRIVPRSNVIKALMSKGLIGSENPPISSVLV 419
Query: 349 VTKEVFERRFVTSYMH-EPEVMTAY 372
T + F +R+V + P++M +
Sbjct: 420 CTDQEFLKRYVMKHDKLVPKLMAIF 444
>TAIR|locus:2036843 [details] [associations]
symbol:AT1G61960 "AT1G61960" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC004392
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000113939 ProtClustDB:CLSN2682053 EMBL:BT028981
IPI:IPI00521152 PIR:T02140 RefSeq:NP_176387.1 UniGene:At.36342
ProteinModelPortal:O80701 PaxDb:O80701 PRIDE:O80701
EnsemblPlants:AT1G61960.1 GeneID:842491 KEGG:ath:AT1G61960
TAIR:At1g61960 eggNOG:NOG329656 InParanoid:O80701 OMA:ITHTFET
PhylomeDB:O80701 Genevestigator:O80701 Uniprot:O80701
Length = 457
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 89/284 (31%), Positives = 152/284 (53%)
Query: 46 TVSFLTHSCGLSLEKAISVSKLVKIQDTEKPNSSIQLLTSRGFTKPQIATLISKYPRILS 105
TVS+L S GL+ + A S+SK V ++ P+S + LLTS GFTK QI+++I+ YPR+L+
Sbjct: 54 TVSYLVDSLGLTTKLAESISKKVSFEERRNPDSVLSLLTSYGFTKSQISSIITIYPRLLA 113
Query: 106 HDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNL 165
D EK + PK++ L+S G S +L +I+ P++L + I +DF+K + +A+ +
Sbjct: 114 LDAEKSIAPKLQSLQSRGASSSELTQIVSTVPKILGKRGHKSITVYYDFVKDIIEADKSS 173
Query: 166 VYA-LKQSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIML--QPPSLVLRAELFKNV 222
Y L S N +K + N++ LR GV + + L++ QP V E F+
Sbjct: 174 SYEKLCHSFPQGN---KKNKIRNISVLRELGVAQRLLFPLLISDGQP---VCGKERFEES 227
Query: 223 VDVIKEMGFEPSSKSFILAVRSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMM 282
+ + EMGF+P + F+ A+R + S T + K + G+ + +FK+ P F+
Sbjct: 228 LKKVVEMGFDPETTKFVEALRVIYRMSDKTIEEKVNVYKRLGFGVADVWAIFKKWPSFLS 287
Query: 283 ASAKKIRKLMDFFVNKIGLEPSDIA----RYPNLLIGSLEKKVL 322
S KKI + + GL ++ ++P + S E+K++
Sbjct: 288 YSEKKITHTFET-LKSCGLLKHEVLLLLKKHPKCICSS-EQKIV 329
Score = 157 (60.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 49/207 (23%), Positives = 90/207 (43%)
Query: 171 QSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMG 230
+++RV+ K + +N + G + + P L + + + +K G
Sbjct: 245 EALRVIYRMSDKTIEEKVNVYKRLGFGVADVWAIFKKWPSFLSYSEKKITHTFETLKSCG 304
Query: 231 FEPSSKSFILAVRSMAM-SSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIR 289
+L + SS+ E + G+S DEF M+ KR P + +A+ ++
Sbjct: 305 LLKHEVLLLLKKHPKCICSSEQKIVNSIETFLGLGFSRDEFAMMVKRYPQCIDYTAETVK 364
Query: 290 KLMDFFVNKIGLEPSDIARYPNLLIGSLEKKVLPRWSVLQVLMSKNLLKKDVN---VSLA 346
K +F V + + P + SLEK+ +PR +V++ L+SK L+K +S
Sbjct: 365 KKTEFIVKNMNWPLEALVSIPQVFGYSLEKRTVPRCNVIKTLISKGLMKDGSEAPPMSSV 424
Query: 347 LFVTKEVFERRFVTSYMH-EPEVMTAY 372
L T + F RR+V + PE+M +
Sbjct: 425 LTSTDQAFLRRYVMKHDKLAPELMAIF 451
>TAIR|locus:2036858 [details] [associations]
symbol:AT1G61970 "AT1G61970" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:KOG1267 EMBL:AC004392 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 HOGENOM:HOG000113939
ProtClustDB:CLSN2682053 EMBL:AY139992 EMBL:BT008499 IPI:IPI00541464
PIR:T02141 RefSeq:NP_001185290.1 RefSeq:NP_176388.1
UniGene:At.36340 UniGene:At.68140 ProteinModelPortal:O80702
SMR:O80702 PaxDb:O80702 PRIDE:O80702 EnsemblPlants:AT1G61970.1
EnsemblPlants:AT1G61970.2 GeneID:842492 KEGG:ath:AT1G61970
TAIR:At1g61970 InParanoid:O80702 OMA:ATKCVAT PhylomeDB:O80702
ArrayExpress:O80702 Genevestigator:O80702 Uniprot:O80702
Length = 418
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 79/263 (30%), Positives = 139/263 (52%)
Query: 46 TVSFLTHSCGLSLEKAISVSKLVKIQDTEKPNSSIQLLTSRGFTKPQIATLISKYPRILS 105
TVS+L S GL+ + A S+S+ V +D P+S + LLTS GFT QI+T+I YP++L
Sbjct: 54 TVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLI 113
Query: 106 HDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNL 165
D EK L PK+++L+S G S ++ +I+ PE+L + I +DF+K +
Sbjct: 114 ADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKSSK 173
Query: 166 VYALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDV 225
L S+ N + + R N++ LR G+P + L+ + V E F+ +
Sbjct: 174 NEKLCHSLPQGNLENKIR---NVSVLRELGMPHKLLFSLL-ISDSQPVCGKEKFEETLKK 229
Query: 226 IKEMGFEPSSKSFILAVRSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASA 285
+ EMGF+P++ F+ A++ + ++ T + K + S G+ + FK+ P+ + S
Sbjct: 230 VVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSE 289
Query: 286 KKIRKLMDFFVNKIGLEPSDIAR 308
KK+ ++ F+ +G + A+
Sbjct: 290 KKMLDSIETFLG-LGFSRDEFAK 311
Score = 206 (77.6 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 81/343 (23%), Positives = 151/343 (44%)
Query: 41 DERSP--TVSFLT-HS-CGLSLEKAISVSKLVKIQDTEKP-NSSIQLLTSRGFTKPQIAT 95
D+ +P ++ LT H G + I + I D EK +Q L SRG + +I
Sbjct: 80 DKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITE 139
Query: 96 LISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFL 155
++S P IL K + ++++ + + LC L +LEN I L
Sbjct: 140 IVSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCH--SLPQGNLENKI-RNVSVL 196
Query: 156 KGVFQANGNLVYALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLR 215
+ + + L L + V +++ + + G +P ++ + +
Sbjct: 197 RELGMPHKLLFSLLISDSQPVCG--KEKFEETLKKVVEMGF-DPTTSKFVEALQVIYKMN 253
Query: 216 AELFKNVVDVIKEMGFEPSS--KSFILAVRSMAMSSKATWQRKKEILISFGWSEDEFRMV 273
+ + V + K +GF+ SF S+ +S K E + G+S DEF +
Sbjct: 254 EKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLD-SIETFLGLGFSRDEFAKM 312
Query: 274 FKRQPLFMMASAKKIRKLMDFFVNKIGLEPSDIARYPNLLIGSLEKKVLPRWSVLQVLMS 333
K P + S + ++K +F V K+ + P + SLEK+++PR +V++ LMS
Sbjct: 313 VKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMS 372
Query: 334 KNLLKKDV-NVSLALFVTKEVFERRFVTSYMHEP---EVMTAY 372
K L++ ++ ++S L TK+VF R+V +++ + E+M Y
Sbjct: 373 KGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIY 415
>TAIR|locus:1006230704 [details] [associations]
symbol:AT1G62085 "AT1G62085" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC000375
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
IPI:IPI00517604 PIR:D96647 RefSeq:NP_974069.1 UniGene:At.66074
ProteinModelPortal:O04576 PaxDb:O04576 PRIDE:O04576
EnsemblPlants:AT1G62085.1 GeneID:2745844 KEGG:ath:AT1G62085
TAIR:At1g62085 eggNOG:NOG314882 HOGENOM:HOG000113939
InParanoid:O04576 OMA:ENNIRRN PhylomeDB:O04576
ProtClustDB:CLSN2682053 Genevestigator:O04576 Uniprot:O04576
Length = 461
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 87/283 (30%), Positives = 151/283 (53%)
Query: 46 TVSFLTHSCGLSLEKAISVSKLVKIQDTEKPNSSIQLLTSRGFTKPQIATLISKYPRILS 105
+VS+L S GL + A S+SK V +D P+S + LL S GFT QI+++I+ YP++L
Sbjct: 57 SVSYLVDSLGLPKKVAESISKKVSFEDKGNPDSVLSLLRSHGFTDSQISSIITDYPQLLV 116
Query: 106 HDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNL 165
D EK + PK+++L+S G S +L I+ PE+L + + I +DF+K + +A+ +
Sbjct: 117 ADAEKSIGPKLQFLQSRGASRSELTHIVSTVPEILGKRGDKTISIYYDFVKEIIEADKSS 176
Query: 166 VYALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIML--QPPSLVLRAELFKNVV 223
+ K + Q+ + N+ LR GVP+ + L++ QP V E F+ +
Sbjct: 177 KFE-KLCHSLPEGSKQENKIRNVLVLRELGVPQRLLFPLLISDHQP---VCGKENFEESL 232
Query: 224 DVIKEMGFEPSSKSFILAVRSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMA 283
+ EMGF+P++ F+ A+R + T + K + S G+S + +FK+ P F+
Sbjct: 233 KKVVEMGFDPTTSKFVKALRVVYRFRDKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFLNF 292
Query: 284 SAKKIRKLMDFFVNKIGLEPSDIA----RYPNLLIGSLEKKVL 322
S KI + + + K GL D+ ++P + S E+K++
Sbjct: 293 SENKIVQTWET-LKKCGLLEDDVLSVLKKFPQCINAS-EQKIM 333
Score = 162 (62.1 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 52/207 (25%), Positives = 93/207 (44%)
Query: 171 QSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMG 230
+++RVV K + +N ++ G + + P L + +K+ G
Sbjct: 249 KALRVVYRFRDKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFLNFSENKIVQTWETLKKCG 308
Query: 231 F-EPSSKSFILAVRSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIR 289
E S + +S+ E + G+S DE M+ KR P ++ SA+ ++
Sbjct: 309 LLEDDVLSVLKKFPQCINASEQKIMNSIETFLGLGFSRDEVAMIAKRFPQCLILSAETVK 368
Query: 290 KLMDFFVNKIGLEPSDIARYPNLLIGSLEKKVLPRWSVLQVLMSKNLLKKDV-NVSLALF 348
K +F V K+ + P +L SLEK+ +PR +V++ LMSK L ++ +S L
Sbjct: 369 KKTEFLVKKMNWPLKAVVSTPAVLGYSLEKRTIPRCNVIKALMSKGSLGSELPGMSSVLV 428
Query: 349 VTKEVFERRFVTSYMHE---PEVMTAY 372
T E F R+V ++ + PE+M +
Sbjct: 429 CTNEEFLCRYVKNHDDKKIVPELMAIF 455
>TAIR|locus:2036878 [details] [associations]
symbol:AT1G61990 "AT1G61990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
EMBL:AC004392 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 HOGENOM:HOG000113939 ProtClustDB:CLSN2682053
EMBL:AF462848 EMBL:BT000861 IPI:IPI00547257 PIR:T02143
RefSeq:NP_176390.1 UniGene:At.28258 UniGene:At.74237
UniGene:At.74283 ProteinModelPortal:O80704 SMR:O80704 PaxDb:O80704
PRIDE:O80704 EnsemblPlants:AT1G61990.1 GeneID:842494
KEGG:ath:AT1G61990 TAIR:At1g61990 eggNOG:NOG240230
InParanoid:O80704 OMA:QMSEKTI PhylomeDB:O80704
Genevestigator:O80704 Uniprot:O80704
Length = 414
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 97/330 (29%), Positives = 165/330 (50%)
Query: 1 MFSLIC--KTLIEKPGSIDLKISY--ARNLKTIIPSVN----SISKPSDERSPTVSFLTH 52
M+SLI + L++ + L +S A L S SI ++ TVS+L
Sbjct: 1 MYSLILHGRRLVQSQKCLSLSVSVQNAFVLSNSFSSARAADVSIRDGRKGKNFTVSYLVD 60
Query: 53 SCGLSLEKAISVSKLVKIQDTEKPNSSIQLLTSRGFTKPQIATLISKYPRILSHDPEKVL 112
S GLS + A S+S+ V +D P+S + L S GFT QI+T+I+ YP +L D +K L
Sbjct: 61 SLGLSKKLAESISRKVSFEDKVNPDSVLSLFRSYGFTDSQISTIITDYPLLLVADAKKAL 120
Query: 113 KPKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNLVYALKQS 172
K++ L+S G S ++ +I+ P +L + I +D +K + A+ + Y L Q
Sbjct: 121 GRKLQILQSRGASSSEITEIVSTVPRILGKK---SITVYYDAVKDIIVADTSSSYELPQG 177
Query: 173 IRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMGFE 232
Q + N++ LR G+P + L++ + V E F + + EMGF+
Sbjct: 178 S-------QGNKIRNVSALRELGMPSRLLLPLLVSKSQP-VCGKENFDASLKKVVEMGFD 229
Query: 233 PSSKSFILAVRSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLM 292
P++ F+LA+R + S+ T + K + S G++ D+ +FK+ P + S KKI K
Sbjct: 230 PTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSA 289
Query: 293 DFFVNKIGLEPSD----IARYPNLLIGSLE 318
+ F++ +G ++ + RYP + S+E
Sbjct: 290 ETFLD-LGYSRAEFLMMVKRYPPCIEYSVE 318
Score = 153 (58.9 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 45/155 (29%), Positives = 75/155 (48%)
Query: 223 VDVIKEMGFEPSSKSFILA-VRSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFM 281
V V + +GF I S+ SK + E + G+S EF M+ KR P +
Sbjct: 254 VVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCI 313
Query: 282 MASAKKIRKLMDFFVNKIGLEPSDIARYPNLLIGSLEKKVLPRWSVLQVLMSKNLLKKDV 341
S + ++K +F V K+ + + +P + S+EK+++PR ++L+ L+SK LL+K
Sbjct: 314 EYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKGS 373
Query: 342 N---VSLALFVTKEVFERRFVTSYMH-EPEVMTAY 372
VS L T E F R+V + P +M +
Sbjct: 374 ELPAVSSVLSCTDEGFLDRYVMKHNELVPTLMAIF 408
>TAIR|locus:2172798 [details] [associations]
symbol:AT5G23930 "AT5G23930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB005244
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000113939 ProtClustDB:CLSN2682053 IPI:IPI00546759
RefSeq:NP_197781.1 UniGene:At.65544 ProteinModelPortal:Q9FF87
PaxDb:Q9FF87 PRIDE:Q9FF87 ProMEX:Q9FF87 EnsemblPlants:AT5G23930.1
GeneID:832458 KEGG:ath:AT5G23930 TAIR:At5g23930 eggNOG:NOG273152
InParanoid:Q9FF87 OMA:MKANFDE PhylomeDB:Q9FF87
Genevestigator:Q9FF87 Uniprot:Q9FF87
Length = 457
Score = 305 (112.4 bits), Expect = 4.6e-27, P = 4.6e-27
Identities = 89/309 (28%), Positives = 156/309 (50%)
Query: 21 SYARNLKTIIPSVNSISKPSDERSP---TVSFLTHSCGLSLEKAISVSKLVKIQDTEKPN 77
++ + +++ + +S DER TVS+L S GL+ + A S+S + P+
Sbjct: 30 AFTESFSSVVTTTKDLSL-EDERKRKTFTVSYLIDSLGLTTKLAESISMKANFDEKGNPD 88
Query: 78 SSIQLLTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYP 137
S ++LL S GF QI+++IS YPR L +PEK L+ K+ +L+ G S +L +I+ P
Sbjct: 89 SVLKLLRSYGFKDSQISSIISTYPRFLIENPEKTLRAKLHFLKLNGASSSELTEIVSKVP 148
Query: 138 ELLSRSLENHIIPTFDFLKGVFQANGNLVYALKQSIRVVNSDIQKRVVPNMNTLRAHGVP 197
++L + I +D++K + Q + + K+ + N + R N++ LR GVP
Sbjct: 149 KILGKRGGKWISHYYDYVKEILQDQDSSSSSSKR--KQTN---RNR---NVSVLRKLGVP 200
Query: 198 EPHIARLIMLQPPSLVLRAELFKNVVDVIKEMGFEPSSKSFILAVRSMAMSSKATWQRKK 257
+ + L++ + V E F+ V I EMGF+P S F+ A+ S T + K
Sbjct: 201 QRLLLNLLISRAKP-VCGKERFEESVKKIVEMGFDPKSPKFVNALYVFYELSDKTIEEKV 259
Query: 258 EILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLEPSDIA----RYPNLL 313
I G S +E VFK+ P + S K I + + + ++GL ++ +YP
Sbjct: 260 NAYIRLGLSVNEVWAVFKKWPFSLKYSEKNIIQKFET-LKRVGLTKEEVCLVVKKYPEC- 317
Query: 314 IGSLEKKVL 322
+G+ E+K++
Sbjct: 318 VGTSEEKIV 326
Score = 137 (53.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 41/158 (25%), Positives = 77/158 (48%)
Query: 220 KNVV---DVIKEMGFEPSSKSFILAVRSMAM-SSKATWQRKKEILISFGWSEDEFRMVFK 275
KN++ + +K +G ++ + +S+ + + + G+++DE M+ K
Sbjct: 288 KNIIQKFETLKRVGLTKEEVCLVVKKYPECVGTSEEKIVKSVKTFLELGFTKDEVLMIIK 347
Query: 276 RQPLFMMASAKKIRKLMDFFVNKIGLEPSDIARYPNLLIGSLEKKVLPRWSVLQVLMSKN 335
R P + +A ++K +F V +G +A P +L SLEK VLPR +V++ LMS
Sbjct: 348 RHPQCIGLAADSVKKKTEFLVKTMGWPLKVVASTPIVLGFSLEKFVLPRCNVIKALMSNG 407
Query: 336 LLKKDVNVSLALFVTKEVFERRFVTSYMHE-PEVMTAY 372
L+ + +S L K F + FV + PE+ + +
Sbjct: 408 LIGEMPAISSVLTSPKLKFLKLFVEKHQDVLPELNSIF 445
>TAIR|locus:2036868 [details] [associations]
symbol:AT1G61980 "AT1G61980" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IDA] [GO:0009409 "response to cold"
evidence=IEP] [GO:0005739 "mitochondrion" evidence=IDA]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634
GO:GO:0009409 EMBL:AC004392 KO:K15032 InterPro:IPR003690
Pfam:PF02536 SMART:SM00733 UniGene:At.23835 HOGENOM:HOG000113939
ProtClustDB:CLSN2682053 EMBL:BT029746 IPI:IPI00542184 PIR:T02142
RefSeq:NP_176389.1 UniGene:At.36338 ProteinModelPortal:O80703
PaxDb:O80703 PRIDE:O80703 EnsemblPlants:AT1G61980.1 GeneID:842493
KEGG:ath:AT1G61980 TAIR:At1g61980 eggNOG:NOG251984
InParanoid:O80703 OMA:LIGSELP PhylomeDB:O80703
Genevestigator:O80703 Uniprot:O80703
Length = 418
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 84/273 (30%), Positives = 139/273 (50%)
Query: 43 RSPTVSFLTHSCGLSLEKAISVSKLVKIQDTEKPNSSIQLLTSRGFTKPQIATLISKYPR 102
+S TVS+L S GL + A SVS+ V +D + P+S + LL S GFT QI+T+++ YP+
Sbjct: 51 KSFTVSYLVDSLGLPKKLAESVSRKVSFEDKDNPDSVLNLLRSHGFTDSQISTIVTDYPQ 110
Query: 103 ILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQAN 162
+L D EK L PK+++L+S G S +L +I+ P++L + I +DF+K
Sbjct: 111 LLVADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKETLLDK 170
Query: 163 GNLVYALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEPHI-ARLIMLQPPSLVLRAELFKN 221
+ + K +++ ++ N++ LR G+P + LI P V E F+
Sbjct: 171 SSK--SEKSCQPFPQGNLENKI-RNLSVLRELGMPHKLLFPLLISCDVP--VFGKEKFEE 225
Query: 222 VVDVIKEMGFEPSSKSFILAVRSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFM 281
+ + EMGF+PS+ F+ A+ + S + K G+ + VFKR P F+
Sbjct: 226 SLKKVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFL 285
Query: 282 MASAKKIRKLMDFFVNKIGLEPSD----IARYP 310
S KKI ++ F+ +G + I R+P
Sbjct: 286 THSEKKILNTIETFLG-LGFSRDEFSVLIKRFP 317
Score = 188 (71.2 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 79/317 (24%), Positives = 147/317 (46%)
Query: 70 IQDTEKPNS-SIQLLTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGISGPD 128
+ D EK + +Q L SRG + ++ ++S P+IL K + ++++ +
Sbjct: 113 VADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKETLLDKSS 172
Query: 129 LAKILC-PYPELLSRSLENHIIPTFDFLKGVFQANGNLVYALKQSIRVVNSDIQKRVVPN 187
++ C P+P+ +LEN I L+ + + L++ L S V +K +
Sbjct: 173 KSEKSCQPFPQ---GNLENKI-RNLSVLRELGMPH-KLLFPLLISCDVPVFGKEK-FEES 226
Query: 188 MNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVI---KEMGFEPSSKSFILAVRS 244
+ + G +P ++ + + +V R KN+ D + K +GF+ ++ V
Sbjct: 227 LKKVVEMGF-DPSTSKFV--EALCVVQRLS-DKNIEDKVNAYKRLGFDVE---YVWTVFK 279
Query: 245 MAMSSKATWQRKK-----EILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKI 299
+ T KK E + G+S DEF ++ KR P + SA+ ++K +F V K+
Sbjct: 280 R-WPNFLTHSEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKM 338
Query: 300 GLEPSDIARYPNLLIGSLEKKVLPRWSVLQVLMSKNLLKKDV-NVSLALFVTKEVFERRF 358
+ P +L SLEK+ +PR +V+Q L+SK L+ ++ ++S T +VF R+
Sbjct: 339 NWPLKALVSNPAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRY 398
Query: 359 VTSYMH---EPEVMTAY 372
V + E E+M Y
Sbjct: 399 VKRHEDKQLETELMAIY 415
>TAIR|locus:2018057 [details] [associations]
symbol:AT1G62120 "AT1G62120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR eggNOG:KOG1267
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000113939 ProtClustDB:CLSN2682053 EMBL:BT015077
EMBL:BT015902 IPI:IPI00545469 RefSeq:NP_176403.1 UniGene:At.49506
ProteinModelPortal:Q6DBE5 PRIDE:Q6DBE5 EnsemblPlants:AT1G62120.1
GeneID:842508 KEGG:ath:AT1G62120 TAIR:At1g62120 InParanoid:Q6DBE5
OMA:MYVRKHD PhylomeDB:Q6DBE5 Genevestigator:Q6DBE5 Uniprot:Q6DBE5
Length = 437
Score = 290 (107.1 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 80/279 (28%), Positives = 142/279 (50%)
Query: 46 TVSFLTHSCGLSLEKAISVSKLVKIQDTEKPNSSIQLLTSRGFTKPQIATLISKYPRILS 105
TVS+L S GL+ + A S+S V + P+S + LL S GFT QI+ +I +PR+L
Sbjct: 58 TVSYLVDSLGLATKVAESISMKVSFDNKGNPDSVLSLLRSHGFTDSQISNIIRTFPRLLI 117
Query: 106 HDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQAN-GN 164
D EK L PK+++L+S+G S +L + + P++L + + +DF+K + +A+ +
Sbjct: 118 LDAEKSLAPKLQFLQSIGASSSELTETVSAVPKILGKRKGKSLSRYYDFVKVIIEADKSS 177
Query: 165 LVYALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVD 224
+ L S+ Q+ + N+ LR GVP+ + L++ V E FK +
Sbjct: 178 KLEKLCHSLP--EGSKQENKIRNLLVLREMGVPQRLLFSLLISDAGD-VCGKEKFKESLK 234
Query: 225 VIKEMGFEPSSKSFILAVRSM-AMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMA 283
E+GF+P++ +F+ A+ + +S K + K G + D+ +FK+ P +
Sbjct: 235 KAVEIGFDPTTATFVKALNVLYGLSDKGI-ENKFNACKRLGLAVDDVWAMFKKWPNILTK 293
Query: 284 SAKKIRKLMDFFVNKIGLEPSD----IARYPNLLIGSLE 318
S KKI ++ F+ +G + + R+P + S E
Sbjct: 294 SEKKIENSVETFLG-LGFSRDEFLMMVKRFPQCIGYSTE 331
Score = 147 (56.8 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 38/115 (33%), Positives = 64/115 (55%)
Query: 258 EILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLEPSDIARYPNLLIGSL 317
E + G+S DEF M+ KR P + S + ++ +F V ++ +A P +L SL
Sbjct: 303 ETFLGLGFSRDEFLMMVKRFPQCIGYSTELMKTKTEFLVTEMNWPLKAVASIPQVLGYSL 362
Query: 318 EKKVLPRWSVLQVLMSKNLLKKDVN-VSLALFVTKEVFERRFVTSYMHEPEVMTA 371
EK+ +PR +V++VL+SK LL+ ++ +S L T EVF +V H+ + + A
Sbjct: 363 EKRTVPRCNVIKVLISKGLLESELPPISSVLTSTSEVFLYMYVRK--HDDKQLVA 415
>TAIR|locus:2036813 [details] [associations]
symbol:AT1G62010 "AT1G62010" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC004392 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 HOGENOM:HOG000113939
ProtClustDB:CLSN2682053 EMBL:BT005017 EMBL:AK117589 IPI:IPI00518008
PIR:T02145 RefSeq:NP_176392.1 UniGene:At.36332
ProteinModelPortal:O80705 SMR:O80705 PaxDb:O80705 PRIDE:O80705
DNASU:842496 EnsemblPlants:AT1G62010.1 GeneID:842496
KEGG:ath:AT1G62010 TAIR:At1g62010 eggNOG:NOG252661
InParanoid:O80705 OMA:WPRSLTH PhylomeDB:O80705 ArrayExpress:O80705
Genevestigator:O80705 Uniprot:O80705
Length = 415
Score = 242 (90.2 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 62/234 (26%), Positives = 119/234 (50%)
Query: 63 SVSKLVKIQDTEKPNSSIQLLTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESL 122
S+ K+ D +S + LL S GFT QI+++I R+L + L K+++L+S
Sbjct: 57 SLRLATKLTDKGNSDSVLDLLRSYGFTDSQISSIIRSDSRVLIDNDATSLGSKLQFLQSR 116
Query: 123 GISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNLVYALKQSIRVVNSDIQK 182
G S +L +++ P++L + + +DF+K + +A+ + Y ++ +S Q
Sbjct: 117 GASSSELTEVVSTVPKILGKREGKSLSRYYDFIKVIIEADKSSKYE-----KISHSLAQG 171
Query: 183 RVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMGFEPSSKSFILAV 242
+ N+ LR GVP+ + L+++ V E F + + EMGF+P++ +F+ A+
Sbjct: 172 NKIRNILVLRELGVPQKRLL-LLLISKSQPVCGKEKFDASLKKVVEMGFDPTTSTFVHAL 230
Query: 243 RSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFV 296
+ S T + K + S G+S D+ +FK+ P + S KK+ ++ F+
Sbjct: 231 HMLYQMSDKTIEEKIRVYRSVGFSVDDVWAMFKKWPRSLTHSEKKVANSIETFL 284
Score = 160 (61.4 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 43/130 (33%), Positives = 70/130 (53%)
Query: 243 RSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLE 302
RS+ S K E + G+S D F M+FKR P + S + ++K +F V ++
Sbjct: 267 RSLTHSEKKV-ANSIETFLGLGFSRDVFMMMFKRFPPCIGYSTEAVKKKTEFLVKEMNWP 325
Query: 303 PSDIARYPNLLIGSLEKKVLPRWSVLQVLMSKNLLKKDVN-VSLALFVTKEVFERRFVTS 361
+A P +L SLEK+ +PR +V++VLMSK LL+ ++ +S L T E F +V+
Sbjct: 326 VKAVASIPQVLGYSLEKRTVPRCNVIKVLMSKGLLESELPPMSSVLTSTSESFLNLYVSK 385
Query: 362 YMHEPEVMTA 371
H+ + + A
Sbjct: 386 --HDDKQLVA 393
>TAIR|locus:2018062 [details] [associations]
symbol:AT1G62150 "AT1G62150" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND]
EMBL:CP002684 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 HOGENOM:HOG000113939 ProtClustDB:CLSN2682053
EMBL:BT005682 EMBL:AK118965 IPI:IPI00535716 RefSeq:NP_176406.1
UniGene:At.10248 ProteinModelPortal:Q8GWB0 PRIDE:Q8GWB0
EnsemblPlants:AT1G62150.1 GeneID:842511 KEGG:ath:AT1G62150
TAIR:At1g62150 InParanoid:Q8GWB0 OMA:YSENRII PhylomeDB:Q8GWB0
ArrayExpress:Q8GWB0 Genevestigator:Q8GWB0 Uniprot:Q8GWB0
Length = 463
Score = 239 (89.2 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 72/280 (25%), Positives = 139/280 (49%)
Query: 46 TVSFLTHSCGLSLEKAISVSKLVKIQDTEKPNSSIQLLTSRGFTKPQIATLISKYPRILS 105
TVS+L S GL+ + A S+S V ++ P++ + LL S FT QI+++IS YP +L
Sbjct: 60 TVSYLVDSLGLASKLAESISMKVSFENKGNPDTVLNLLRSHEFTDSQISSIISDYPTLLV 119
Query: 106 HDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNL 165
D E L PK+ ++S G S +L +I+ P++L + I +D +K + +A+ +
Sbjct: 120 ADAENSLGPKLLLMQSRGASSSELTEIVSKVPKILGMKGDKSIGRYYDIVKEIIEADKSS 179
Query: 166 VYALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDV 225
+ K + Q+ + N+ LR GVP+ + L+ + E F+ ++
Sbjct: 180 KFE-KLCHSLPEGSKQENKIRNVLVLRDLGVPQRLLFSLLFSNH-HVCCGKEKFEESLNK 237
Query: 226 IKEMGFEPSSKSFILAVRSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASA 285
+ MGF+P++ F+ A+ + S + + FG + ++ +FK+ P F+ S
Sbjct: 238 VVGMGFDPTTPKFVEALCIVYGLSDKRLEENFNVYKRFGLTVNDVWELFKKCPAFLGYSE 297
Query: 286 KKIRKLMDFFVNKIGL---EPSDIARYPNLLIGSLEKKVL 322
+I + + + + GL E + + L + + E+++L
Sbjct: 298 NRIIQTFEA-LKRCGLCEDEVLSVFKKNPLCLRASEQQIL 336
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 48/194 (24%), Positives = 87/194 (44%)
Query: 171 QSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMG 230
+++ +V KR+ N N + G+ + L P L + +K G
Sbjct: 252 EALCIVYGLSDKRLEENFNVYKRFGLTVNDVWELFKKCPAFLGYSENRIIQTFEALKRCG 311
Query: 231 FEPSSKSFILAVRSMAM-SSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIR 289
+ + + +S+ E I G+S DEF M+ K P + SA+ ++
Sbjct: 312 LCEDEVLSVFKKNPLCLRASEQQILNSMETFIGLGFSRDEFVMMVKCLPQCIGYSAEMVK 371
Query: 290 KLMDFFVNKIGLEPSDIARYPNLLIGSLEKKVLPRWSVLQVLMSKNLLKKDVN-VSLALF 348
K +F V K+ I +P +L S+EK+ +PR +V++ LMSK LL ++ ++ L
Sbjct: 372 KKTEFVVKKMNWPLKVITLFPQVLGYSMEKRTVPRCNVIKALMSKGLLGSELPPMASVLA 431
Query: 349 VTKEVFERRFVTSY 362
T + F +R+V +
Sbjct: 432 CTDQTFLKRYVVEH 445
>TAIR|locus:2010698 [details] [associations]
symbol:AT1G56380 "AT1G56380" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009507 "chloroplast" evidence=ISM] [GO:0006863
"purine nucleobase transport" evidence=RCA] EMBL:CP002684 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00938838
RefSeq:NP_001154432.1 UniGene:At.52229 ProteinModelPortal:F4I534
EnsemblPlants:AT1G56380.2 GeneID:842091 KEGG:ath:AT1G56380
OMA:ELLMEDA ArrayExpress:F4I534 Uniprot:F4I534
Length = 399
Score = 218 (81.8 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 84/313 (26%), Positives = 146/313 (46%)
Query: 39 PSD-ERSP--TVSFLTHSCGLSLEKAISVSKLVKIQDTEKPNSSIQLLTSRGFTKPQIAT 95
P D ++ P TVS+L S G+ ++ A S+ K V +D PNS + LL S FT QI++
Sbjct: 19 PRDAQKEPKLTVSYLVDSVGIPIKFAESILKEVSSKDKCNPNSVLNLLRSYDFTDSQISS 78
Query: 96 LISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFL 155
+I+ P +L D E L PK+++LES I L I+ P++L E +I +DF+
Sbjct: 79 IITTDPELLMEDAENSLCPKLKFLESREILSSRLNDIVTRVPKILRMEEEKSMITYYDFV 138
Query: 156 KGV-FQANGNLVYALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVL 214
K + ++ + Y + + + S I+K + + P+ A +++ L
Sbjct: 139 KTITLTSSRSDFYKVCELYPYIESSIRKVIEMGFDPF----APKIFDATVVVC-----TL 189
Query: 215 RAELFKNVVDVIKEMGFEPSS--KSFILAVRSMAMSSKATWQRKKEILISFGWSEDEFRM 272
E + V++ K +GF+ + F + +S K Q E L G E+E
Sbjct: 190 SNETLEERVNIYKTLGFDVRDVWEMFKKCPTFLNISEKKITQ-SFETLKKCGLVEEEVIS 248
Query: 273 VFKRQPLFMMASAKKIRKLMDFFVNKIGLEPSDIA----RYPNLLIGSLEKKVLPRWSVL 328
+F++ P + S I + +F + GL ++ RYP IG EKK+L + +
Sbjct: 249 MFQKSPQCIDFSELDITQNFEF-LKGCGLVEEEVLSMFKRYPQC-IGFSEKKIL---NAV 303
Query: 329 QVLMSKNLLKKDV 341
+ + + K +V
Sbjct: 304 ETFLGQGFSKDEV 316
Score = 153 (58.9 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 84/366 (22%), Positives = 159/366 (43%)
Query: 15 SIDLKISYARNLKTIIPSVNSISK--PSDERSPTVSF-LTHSCGLSLEKAISVSKLVKIQ 71
S+ + I +A ++I+ V+S K P+ + S+ T S + I+ + ++
Sbjct: 36 SVGIPIKFA---ESILKEVSSKDKCNPNSVLNLLRSYDFTDS---QISSIITTDPELLME 89
Query: 72 DTEKPNS-SIQLLTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGI--SGPD 128
D E ++ L SR ++ ++++ P+IL + EK + ++++++ + S D
Sbjct: 90 DAENSLCPKLKFLESREILSSRLNDIVTRVPKILRMEEEKSMITYYDFVKTITLTSSRSD 149
Query: 129 LAKILCPYPELLSRSLENHIIPTFD-FLKGVFQANGNLVYALKQSIRVVNSDIQKRVVPN 187
K+ YP + S S+ I FD F +F A +V L N +++RV
Sbjct: 150 FYKVCELYPYIES-SIRKVIEMGFDPFAPKIFDATV-VVCTLS------NETLEERV--- 198
Query: 188 MNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMGF-EPSSKSFILAVRSMA 246
N + G + + P L + + + +K+ G E S
Sbjct: 199 -NIYKTLGFDVRDVWEMFKKCPTFLNISEKKITQSFETLKKCGLVEEEVISMFQKSPQCI 257
Query: 247 MSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLEPSDI 306
S+ + E L G E+E +FKR P + S KKI ++ F+ + G ++
Sbjct: 258 DFSELDITQNFEFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETFLGQ-GFSKDEV 316
Query: 307 ---------ARYPNLLIGSLEKKVLPRWSVLQVLMSKNLLKKDVNVSLALFVTK-EVFER 356
P +L S+EK ++PR +V++ L SK LLK +V+ ++ + EVF
Sbjct: 317 MMMVNREGVVSIPVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVSSMFSVLICPDEVFLE 376
Query: 357 RFVTSY 362
R+V+ +
Sbjct: 377 RYVSKH 382
>TAIR|locus:2207265 [details] [associations]
symbol:AT1G79220 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC002986 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00545922
PIR:T01035 RefSeq:NP_565202.1 UniGene:At.34152
ProteinModelPortal:O64531 EnsemblPlants:AT1G79220.1 GeneID:844263
KEGG:ath:AT1G79220 TAIR:At1g79220 eggNOG:NOG329730
HOGENOM:HOG000114992 InParanoid:O64531 OMA:KVQRNMT PhylomeDB:O64531
ProtClustDB:CLSN2689322 Genevestigator:O64531 Uniprot:O64531
Length = 399
Score = 210 (79.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 67/309 (21%), Positives = 148/309 (47%)
Query: 64 VSKLVKIQDTEKPNSSIQLLTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLG 123
V + K++D +S +Q+L G +I+ L ++ P + + + L+ K+ L+ LG
Sbjct: 70 VGEKEKVRDIT--SSPLQVLRRWGCDDDEISKLFTRRPALQRANVAQ-LEFKLSLLKPLG 126
Query: 124 ISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNLVYALKQSIRVVNSDIQKR 183
I+ DL KIL P S L + ++ + + L + ++ ++ D+ +
Sbjct: 127 ITSSDLVKILNCRPRFFSCRLV--LDERINYFMEILGSKEVLRRVIIRNPSLMLYDLDDK 184
Query: 184 VVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMGFEPSSKSFILAVR 243
+ P + + G + + +++ +P +L+ R + I++ G SK F
Sbjct: 185 IKPAIEYYKGLGFSQQDLVAMLISRP-TLIPRTNFNNEKFEYIEKTGVTRESKMFKYVAV 243
Query: 244 SMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLEP 303
+ +S T + K L FG+SE+E ++ + P+ + S +K+++ M F + + L
Sbjct: 244 IIGVSRMETIEEKVRNLEKFGFSEEEIWHLYGKCPILLSLSVEKVQRNMTFVIASMKLPA 303
Query: 304 SDIARYPNLLIGSLEKKVLPRWSVLQVLMSKNLLKKDVNVSLALFVTKEVFERRFVTSYM 363
+ ++P LL+ +LE ++ PR +++ ++ L K + +++F + E+RF+ Y+
Sbjct: 304 HSVVKHPCLLLLNLESRLKPRADLVKRVLEMRL--KPLIKEVSIFRAVRMSEKRFLKVYV 361
Query: 364 --HEPEVMT 370
H ++ T
Sbjct: 362 MCHPQDIAT 370
>TAIR|locus:2051814 [details] [associations]
symbol:AT2G44020 "AT2G44020" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004005
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:AY039920 EMBL:AY079380 IPI:IPI00516323 PIR:T00682
RefSeq:NP_566005.1 UniGene:At.19499 UniGene:At.71899
ProteinModelPortal:O80572 SMR:O80572 PaxDb:O80572 PRIDE:O80572
EnsemblPlants:AT2G44020.1 GeneID:819007 KEGG:ath:AT2G44020
TAIR:At2g44020 eggNOG:NOG235651 HOGENOM:HOG000241428
InParanoid:O80572 OMA:YFTYSLE PhylomeDB:O80572 ProtClustDB:PLN03196
ArrayExpress:O80572 Genevestigator:O80572 Uniprot:O80572
Length = 507
Score = 186 (70.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 63/291 (21%), Positives = 126/291 (43%)
Query: 80 IQLLTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPEL 139
++ L K + ++ KYP +L E + + YL S+G+S D+ ++ YP L
Sbjct: 184 VKFLRGLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYL 243
Query: 140 LSRSLENHIIPTFDFLKGVFQANGNLVYALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEP 199
L + I P D+L + + L++ +V ++++ V PN++ L + GV +
Sbjct: 244 LGMRVGTMIKPLVDYLISIGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKE 303
Query: 200 HIARLIMLQPPSLVLRAELFKNVVDVIKEMGFEPSSKSFILAVRSMA--MSSKATWQRKK 257
+ LI P L L + + + + + F V M +S K K
Sbjct: 304 LLPLLIAQYPQILGLPVKAKMSTQQYFFSLKLKIDPEGFARVVEKMPQIVSLKQNVIMKP 363
Query: 258 -EILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLEPSDIARYPNLLIGS 316
E L+ + ++ + R P + + + ++ F+ ++G ++ YP S
Sbjct: 364 IEFLLGRAFQVEDIAKMVVRCPQILCSRVELMKNSYYFYKTEMGRPMKELVEYPEYFTYS 423
Query: 317 LEKKVLPRWSVLQVLMSKNLLKKDVNVSLALFVTKEVFERRFVTSYMHEPE 367
LE ++ PR+ LQ SK + + +N L + + FE R +++ +P+
Sbjct: 424 LESRIKPRYQKLQ---SKGI-RSSLNWFLNC--SDQRFEERLQGNFI-DPD 467
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 67/282 (23%), Positives = 134/282 (47%)
Query: 69 KIQDTEKPNSSIQLLTSR-GFTKPQIATL--ISKYPRILSHDPEKVLKPKIEYLESLGIS 125
+++ E P S+I+++ R F + T+ I++YP +L K L P + YLE +GIS
Sbjct: 99 ELESIELP-STIEVMCERVEFLQKLGLTIDDINEYPLMLGCSVRKNLIPVLAYLEKIGIS 157
Query: 126 GPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNLVYALKQSIRVVNSDIQKRVV 185
L + + YP++L S+ + P FL+G+ +L Y L + ++ ++ +
Sbjct: 158 RSKLGEFVKNYPQVLHASVVVELAPVVKFLRGLDVEKQDLGYVLMKYPELLGFKLEGTMS 217
Query: 186 PNMNTLRAHGVPEPHIARLIMLQPPSLVLRA-ELFKNVVDVIKEMGFEPSSKSFILAVRS 244
++ L + GV I ++ P L +R + K +VD + +G + +L RS
Sbjct: 218 TSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKKIVARMLEKRS 277
Query: 245 --MAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAK-KIRKLMDFFVNKIGL 301
+ + + T + + LISFG ++ ++ + P + K K+ FF K+ +
Sbjct: 278 YIVGYNLEETVKPNVDCLISFGVKKELLPLLIAQYPQILGLPVKAKMSTQQYFFSLKLKI 337
Query: 302 EPSDIARYPNLL--IGSLEKKVLPRWSVLQVLMSKNLLKKDV 341
+P AR + I SL++ V+ + ++ L+ + +D+
Sbjct: 338 DPEGFARVVEKMPQIVSLKQNVIMK--PIEFLLGRAFQVEDI 377
>TAIR|locus:2153433 [details] [associations]
symbol:PTAC15 "AT5G54180" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009295 "nucleoid" evidence=IDA] [GO:0009508
"plastid chromosome" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] EMBL:CP002688 GO:GO:0009507
EMBL:AB013387 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
GO:GO:0009508 EMBL:AY081343 EMBL:BT000254 IPI:IPI00519701
RefSeq:NP_200229.1 UniGene:At.29509 ProteinModelPortal:Q9FK23
PRIDE:Q9FK23 EnsemblPlants:AT5G54180.1 GeneID:835506
KEGG:ath:AT5G54180 TAIR:At5g54180 InParanoid:Q9FK23 OMA:DNIEMIC
PhylomeDB:Q9FK23 ProtClustDB:CLSN2686733 ArrayExpress:Q9FK23
Genevestigator:Q9FK23 Uniprot:Q9FK23
Length = 500
Score = 173 (66.0 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 73/356 (20%), Positives = 161/356 (45%)
Query: 2 FSLICKTLIEK-PGSIDLKISYARNLKTIIPSVNSISKPSDERSPTVSFLTHSCGLSLEK 60
F L+ L+++ G +D ++ L +++ + SI +++ + L H G+ EK
Sbjct: 146 FDLVISFLVDELEGRLDPEL--VERLLSVVDT--SILLSFNQKVRLL--LLH--GIPKEK 197
Query: 61 AISVSKLVKIQDT--EKPNSSIQLLTSRGFTKPQIAT-LISKYPRILSHDPEKVLKPKIE 117
V V + +K I+ L S F +P +I++ P IL+ D + L P+++
Sbjct: 198 ISHVLNKVYLNKLLYQKSVEDIERLIS--FLEPFGGIGIIARRPVILNSDLDSQLIPRVD 255
Query: 118 YLESLGISGPD---LAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNLVYALKQSI- 173
++ +L SG D +L P +LS S+E H+ +FLK V+ +
Sbjct: 256 FIRNL--SGEDDFATGTVLRRLPAILSYSVE-HMNGQVEFLKSFAGLTSEQVFKIVHVFP 312
Query: 174 RVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMGFEP 233
V+++ ++++ P + L+ G P + + + P L L + + + ++G++
Sbjct: 313 NVISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLILALSENNLSHKLGFLVKIGYKH 372
Query: 234 SSKSFILAVRSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMD 293
+K A+ ++ +S QR + +S+G S ++ + + P + + + + ++
Sbjct: 373 RTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLE 432
Query: 294 FFVNKIGLEPSDIARYPNLLIGSLEKKVLPRWSVLQVLMSKNL-LKKDVNVSLALF 348
+ + +G E ++ +P L L+ ++ R+ +N+ L K + VS F
Sbjct: 433 YLIEYMGREVEELLAFPAFLGYKLDSRIKHRYEEKLKSRGENMSLNKLLTVSAERF 488
Score = 145 (56.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 68/271 (25%), Positives = 126/271 (46%)
Query: 70 IQDTEKPNSSIQLLTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDL 129
I+ + S L GF + + +++K P I S +K+ ++ L+SL I+G L
Sbjct: 72 IESGSQIESLFSLFRDIGFIEEETEMILAKNPDIKSTSLDKI-GARVASLQSLKINGFPL 130
Query: 130 AKILCPYPELLSRSLENHIIPTF--DFLKGVFQANGNLVYALKQSIRVVNSDIQKRVVPN 187
++ P LL+ S E ++ +F D L+G + + LV L + VV++ I
Sbjct: 131 QGLIAKCPNLLT-SEEFDLVISFLVDELEG--RLDPELVERL---LSVVDTSILLSFNQK 184
Query: 188 MNTLRAHGVPEPHIARLIMLQPPSLVLRAELF-KNVVDVIKEMGF-EPSSKSFILAVRSM 245
+ L HG+P+ I+ ++ + L L+ K+V D+ + + F EP I+A R +
Sbjct: 185 VRLLLLHGIPKEKISHVLN----KVYLNKLLYQKSVEDIERLISFLEPFGGIGIIARRPV 240
Query: 246 AMSSKATWQRKKEILISFGWS-EDEFRM--VFKRQPLFMMASAKKIRKLMDFFVNKIGLE 302
++S Q + S ED+F V +R P + S + + ++F + GL
Sbjct: 241 ILNSDLDSQLIPRVDFIRNLSGEDDFATGTVLRRLPAILSYSVEHMNGQVEFLKSFAGLT 300
Query: 303 PSDIAR----YPNLLIGSLEKKVLPRWSVLQ 329
+ + +PN++ S E+K+ PR L+
Sbjct: 301 SEQVFKIVHVFPNVISTSKERKLRPRIEFLK 331
>TAIR|locus:2139394 [details] [associations]
symbol:BSM "AT4G02990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0009536 "plastid" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0032502 "developmental
process" evidence=IMP] [GO:0042793 "transcription from plastid
promoter" evidence=IMP] [GO:0042794 "rRNA transcription from
plastid promoter" evidence=IMP] GO:GO:0009536 EMBL:CP002687
GO:GO:0008380 GO:GO:0009790 EMBL:AF069442 EMBL:AL161495 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 HOGENOM:HOG000241428
ProtClustDB:PLN03196 IPI:IPI00547639 PIR:T01394 RefSeq:NP_192208.1
UniGene:At.10877 ProteinModelPortal:Q9ZT96 SMR:Q9ZT96 STRING:Q9ZT96
PRIDE:Q9ZT96 EnsemblPlants:AT4G02990.1 GeneID:828116
KEGG:ath:AT4G02990 TAIR:At4g02990 InParanoid:Q9ZT96 OMA:FPAFFTY
PhylomeDB:Q9ZT96 ArrayExpress:Q9ZT96 Genevestigator:Q9ZT96
GO:GO:0042794 Uniprot:Q9ZT96
Length = 541
Score = 171 (65.3 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 70/311 (22%), Positives = 132/311 (42%)
Query: 7 KTLIEKPGSIDLKISYARN-LKT--------IIPS-VNSISKP--SDERSPTVSFLTHSC 54
K+L +P +D+ A N K I+P ++ + P +D V FL H
Sbjct: 99 KSLYSRPSLLDMNKEKAANRAKVYEFLRGIGIVPDELDGLELPVTADVMKERVEFL-HKL 157
Query: 55 GLSLEKAISVSKLVKIQDTEKPNSSIQLLTSRGFTKPQIATLISKYPRILSHDPEKVLKP 114
GL++E + ++ + + L G K + +YP++L L P
Sbjct: 158 GLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVIDLAP 217
Query: 115 KIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNLVYALKQSIR 174
++YL+ L I D+ ++L YPE+L LE + + +L G+ A + L +
Sbjct: 218 VVKYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPE 277
Query: 175 VVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAE-LFKNVVDVIKEMGFEP 233
++ + + + P + L G+P ARLI +P L + K V ++++
Sbjct: 278 ILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRE 337
Query: 234 SSKSFILA----VRSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIR 289
+S I+A + + + K QRK + + + ++ + +R P F+ S +
Sbjct: 338 TSLPSIIAQYPEIIGIDLKPKLDTQRKL-LCSAIHLNPEDLGSLIERMPQFVSLSESPML 396
Query: 290 KLMDFFVNKIG 300
K +DF + K G
Sbjct: 397 KHIDF-LTKCG 406
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 61/288 (21%), Positives = 120/288 (41%)
Query: 90 KPQ-IATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLENHI 148
KP + ++ +YP +L E + + YL +G++ ++ IL YPE+L + I
Sbjct: 228 KPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARII 287
Query: 149 IPTFDFLKGVFQANGNLVYALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQ 208
P ++L+ + +++ ++ ++ V PN+ L+ V E + +I Q
Sbjct: 288 KPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIA-Q 346
Query: 209 PPSLV---LRAELFKNVVDVIKEMGFEPSSK-SFILAVRSMAMSSKATWQRKKEILISFG 264
P ++ L+ +L + + P S I + S++ + + L G
Sbjct: 347 YPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCG 406
Query: 265 WSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLEPSDIARYPNLLIGSLEKKVLPR 324
+S D+ R + P + + ++ ++F ++ D+ +P LE V PR
Sbjct: 407 FSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPR 466
Query: 325 WSVLQVLMSKNLLKKDVNVSLA--LFVTKEVFERRFVTSYMHEPEVMT 370
K ++KK + SLA L + E FE+R + EV T
Sbjct: 467 --------HKKIIKKGIKCSLAWMLNCSDEKFEQRMSYDTIDIEEVET 506
>TAIR|locus:2049329 [details] [associations]
symbol:EMB2219 "embryo defective 2219" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] GO:GO:0009506 GO:GO:0009507
EMBL:CP002685 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 IPI:IPI00895653 RefSeq:NP_179763.3 UniGene:At.39539
ProteinModelPortal:F4IHL3 PRIDE:F4IHL3 EnsemblPlants:AT2G21710.1
GeneID:816708 KEGG:ath:AT2G21710 OMA:EMIADFP ArrayExpress:F4IHL3
Uniprot:F4IHL3
Length = 641
Score = 176 (67.0 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 62/294 (21%), Positives = 131/294 (44%)
Query: 74 EKPNSSIQLLTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKIL 133
E+ S + G + T++ YP+I+ +V++ KI YL+ G+S ++ ++L
Sbjct: 314 EEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLL 373
Query: 134 CPYPELLSRSLENH---IIPTFDFLKGVFQANGNLVYALKQSIRVVNSDIQKRVVPNMNT 190
P L+ S+E ++ F +L G+ + + +K + + D++K + P +
Sbjct: 374 AYKPHLMGCSIEERWKPLVKYFYYL-GIPKEGMKRILVVKPILYCI--DLEKTIAPKVRF 430
Query: 191 LRAHGVPEPHIARLIMLQPPSLVLRAELFKN----VVDVIKEMGFEPSSKSFILAVRS-- 244
L+ G+P I +++ + PSL+ + L+K V+ ++ G ++A+
Sbjct: 431 LQEMGIPNEAIGNMLV-KFPSLLTNS-LYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPAL 488
Query: 245 MAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLEP- 303
+ S + IS G + + P+ + + +R + + + + P
Sbjct: 489 LGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRY-LRRTMIRPL 547
Query: 304 SDIARYPNLLIGSLEKKVLPRWSVLQVLMSKNLLKKDVNVSLALFVTKEVFERR 357
D+ +P SLE++++PR ++ M +N + + LA T E FERR
Sbjct: 548 QDLIEFPRFFSYSLERRIIPRHTI----MVENRVNFKLRYMLAC--TDEEFERR 595
Score = 126 (49.4 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 61/232 (26%), Positives = 103/232 (44%)
Query: 103 ILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDF-LK-GVFQ 160
IL + E+ L +EYLES G+ + ++ PELLS S+E + DF LK G+ Q
Sbjct: 273 ILQRNREE-LNEIVEYLESNGVRRDWMGYVVGRCPELLSFSMEE-VKSRVDFFLKMGMNQ 330
Query: 161 AN-GNLVYALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAE-L 218
+ G +VY + I + + ++ + N L+ G+ + RL+ +P + E
Sbjct: 331 NDFGTMVYDYPKIIGFFSFQVMEKKI---NYLKEFGLSTEEVGRLLAYKPHLMGCSIEER 387
Query: 219 FKNVVDVIKEMGFEPSSKSFILAVRSM--AMSSKATWQRKKEILISFGWSEDEF-RMVFK 275
+K +V +G IL V+ + + + T K L G + M+ K
Sbjct: 388 WKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVK 447
Query: 276 RQPLFMMASAKKIRKLMDFFVNKIGLEPSDIARY----PNLLIGSLEKKVLP 323
L + KKIR ++ F + + G+ DI + P LL S+ K+ P
Sbjct: 448 FPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEP 499
Score = 37 (18.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 3 SLICKTLIEKPGSIDLKISYARNLKTIIPSV-NSISKPSDE 42
SL+ + + PGSI + + ++ + +PS+ N + D+
Sbjct: 90 SLVTRRTPQFPGSIYAQSASDADIASSLPSLRNFLGSDGDD 130
>TAIR|locus:2056745 [details] [associations]
symbol:EMB93 "EMBRYO DEFECTIVE 93" species:3702
"Arabidopsis thaliana" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0071452 "cellular
response to singlet oxygen" evidence=IGI] GO:GO:0009507
EMBL:CP002685 GO:GO:0009793 GO:GO:0071452 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 EMBL:AY219044
EMBL:AY649248 IPI:IPI00531063 RefSeq:NP_178405.2 UniGene:At.41435
ProteinModelPortal:Q84X53 SMR:Q84X53 PRIDE:Q84X53
EnsemblPlants:AT2G03050.1 GeneID:814834 KEGG:ath:AT2G03050
TAIR:At2g03050 InParanoid:Q84X53 OMA:ELAEFPH PhylomeDB:Q84X53
ProtClustDB:CLSN2681137 Genevestigator:Q84X53 Uniprot:Q84X53
Length = 283
Score = 158 (60.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 46/168 (27%), Positives = 88/168 (52%)
Query: 37 SKPSDERSPTVSFLTHSCGLS---LEKAISVSKLVKIQDTE-KPNSSIQLLTSRGFTKPQ 92
S P E P + FL++ +S + K+IS + I + + ++ L + GF
Sbjct: 94 SDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRD 153
Query: 93 IATLISKYPRILSHDPEKVLKPKIEYLES-LGISGPDLAKILCPYPELLSRSLENHIIPT 151
T+ S+ +L + E+ L PKIEYLE LG + ++AK++ P LL+ S++N+++P
Sbjct: 154 --TITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPK 211
Query: 152 FDFLKGVFQANGNLVYALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEP 199
+F + + G+ V LK+ + + +++++ P L+ HG+ P
Sbjct: 212 VEFF--IEEMRGD-VKELKRFPQYFSFSLERKIKPRHRLLKEHGILMP 256
Score = 147 (56.8 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 41/174 (23%), Positives = 86/174 (49%)
Query: 60 KAISVSKLVKIQDTEKPNSSIQLLTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYL 119
KA+ V+ ++ S LL+S G ++P + ++ +P +L+ DPE + P + +L
Sbjct: 48 KALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFL 107
Query: 120 ES-LGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNLVYALKQSIRVVNS 178
+ + IS D+ K + P LL S++ + P FLK + + + + + ++ +V S
Sbjct: 108 SNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTITS-RNTVLLV-S 165
Query: 179 DIQKRVVPNMNTLRAH-GVPEPHIARLIMLQPPSLVLRAE--LFKNVVDVIKEM 229
++++ ++P + L G +A++++ P L + L V I+EM
Sbjct: 166 NVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEM 219
>TAIR|locus:505006461 [details] [associations]
symbol:MDA1 "AT4G14605" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006970 "response to osmotic
stress" evidence=IMP] [GO:0009651 "response to salt stress"
evidence=IMP] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
GO:GO:0009737 EMBL:CP002687 GO:GO:0009651 GO:GO:0009658 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00532745
RefSeq:NP_567435.4 UniGene:At.33263 ProteinModelPortal:F4JVI3
SMR:F4JVI3 PRIDE:F4JVI3 EnsemblPlants:AT4G14605.1 GeneID:827109
KEGG:ath:AT4G14605 OMA:HLVSRLH PhylomeDB:F4JVI3 Uniprot:F4JVI3
Length = 493
Score = 161 (61.7 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 60/290 (20%), Positives = 132/290 (45%)
Query: 60 KAISVSKLVKIQDTE---KPNSSIQLLTSRGFTKPQIATLISKYPRILSHDPEKVLKPKI 116
K +VS++ ++ DTE +P + + LL G QI T+ K+ + + +KP +
Sbjct: 180 KLRAVSRVSEL-DTEGALRPQT-LYLL-DLGLNLEQIKTITRKFAAFPYYSLDGKIKPVV 236
Query: 117 EYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNLVYALKQSIRVV 176
E+L LGI D+ ILC P++ SL +++ PT FL+ + + + ++
Sbjct: 237 EFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAIL 296
Query: 177 NSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAE-LFKNVVDVIKEMGFEPSS 235
QK + + L G+ E I R++ P + E + ++ + + + +
Sbjct: 297 TYSRQK-LTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAV 355
Query: 236 KSFILAVRSMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQ-PLFMMASAKKIRKLMDF 294
++ +S ++ + E + G+ DE ++ R L+ + + + D+
Sbjct: 356 LLH-RCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDY 414
Query: 295 FVNKIGLEPSDIARYPNLLIGSLEKKVLPRWSVLQVLMSKNLLKKDVNVS 344
F + S++ ++P SL++++ PR+ ++Q + LL + +++S
Sbjct: 415 F-QTMDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSLS 463
>TAIR|locus:2062328 [details] [associations]
symbol:AT2G34620 "AT2G34620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC004077 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00545404
PIR:H84758 RefSeq:NP_181009.1 UniGene:At.37779
ProteinModelPortal:O64685 SMR:O64685 STRING:O64685 PaxDb:O64685
PRIDE:O64685 EnsemblPlants:AT2G34620.1 GeneID:818027
KEGG:ath:AT2G34620 TAIR:At2g34620 eggNOG:NOG301834
HOGENOM:HOG000239190 InParanoid:O64685 OMA:RCPALFT PhylomeDB:O64685
ProtClustDB:CLSN2683649 Genevestigator:O64685 Uniprot:O64685
Length = 303
Score = 143 (55.4 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 78/292 (26%), Positives = 127/292 (43%)
Query: 74 EKPNSSIQLLTSRGFTKPQ-IATLISKYPRILSHDPEKVL--KPKIEYLESLGISGPDLA 130
+KP+ Q ++ TKP I T + +P D L K KI LE +GI D
Sbjct: 14 KKPSCPQQSQSTFLSTKPTTIKTNLHSHPLFTVADQTVTLQMKEKILCLELMGI---DSG 70
Query: 131 KILCPYPELLSRSLENHIIPTFDFL--KGVFQANGNLVYALKQSIRVVNSDIQKRVVPNM 188
K L P L S L++ I FL KG++ +L L +++ SD++ + P
Sbjct: 71 KALSLNPCLCSAPLDS-IQSVLHFLQSKGIYP--NDLPRILGMCPKILTSDVRTELYPVF 127
Query: 189 NTLR--AHGVPEPHIARLIMLQPPSLVLRAE-LFKNVVDVIKEMGFEPSSKSFILAVRSM 245
L H VPE R+I P L+ E K + ++ +G + +
Sbjct: 128 MFLSNDLH-VPENAFRRVIKKCPRLLISSVEDQLKPALFYLQRLGLKDLEALAYQDPILL 186
Query: 246 AMSSKATWQRKKEILISFGWSEDE-FRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLEPS 304
S + T K L S G+S E M+ + LF + + +D+F+++I +
Sbjct: 187 VSSVEHTLIPKLRFLESIGFSRPEAIGMILRCPALFTFSIENNFKPKLDYFMSEIKGKLE 246
Query: 305 DIARYPNLLIGSLEKKVLPRWSVLQVLMSKNLLKKDVNVSLALFVTKEVFER 356
++ +P SLEK++ PR L+ M + L ++ +SL L T E FE+
Sbjct: 247 NLKEFPQYFAFSLEKRIKPRH--LES-MERGL---ELPLSLMLKSTDEEFEQ 292
>TAIR|locus:2037338 [details] [associations]
symbol:AT1G74120 "AT1G74120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 EMBL:AC079678 IPI:IPI00521430 PIR:C96769
RefSeq:NP_565080.1 UniGene:At.66135 ProteinModelPortal:Q9C6A1
PRIDE:Q9C6A1 EnsemblPlants:AT1G74120.1 GeneID:843752
KEGG:ath:AT1G74120 TAIR:At1g74120 HOGENOM:HOG000006334
InParanoid:Q9C6A1 OMA:FRAGFEV PhylomeDB:Q9C6A1
ProtClustDB:CLSN2689192 ArrayExpress:Q9C6A1 Genevestigator:Q9C6A1
Uniprot:Q9C6A1
Length = 445
Score = 146 (56.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 54/256 (21%), Positives = 115/256 (44%)
Query: 108 PEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNLVY 167
P+K + L+SLG +++IL +P +L + E I +FL G+ A N+
Sbjct: 144 PDK-FNECVRVLKSLGFCDSTVSRILSSFPGVLLVN-EIEIRRKIEFLVGIGIARDNIER 201
Query: 168 ALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVIK 227
V+ + R+ P ++ G + + + I +P L L +++I
Sbjct: 202 FFHVFPEVLGIGTETRLKPLLDEFMKMGFSKDDVKKEIAREPRVLGLELGELPRCLELIN 261
Query: 228 EMGFEPSSKSFILAVRSMAMSSKATWQRKKEILISFGW-SEDEFRMVFKRQPLFMMASAK 286
+ + I++ + + + + + L +G D F++V+K +P ++ +
Sbjct: 262 TLKCREVIRVSIISEGAFRAGFEV--KLRVDCLCKYGLIRRDAFKVVWK-EPRVILYEIE 318
Query: 287 KIRKLMDFFVNKIGLEPSDIARYPNLLIGSLEKKVLPRWSVLQVLMSKNLLKKDVNVSLA 346
I K ++F N++G + +A P L +L+K+++PR++V+ L K L D+ +
Sbjct: 319 DIEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDYLKLKGGLGCDIGLKGL 378
Query: 347 LFVTKEVFERRFVTSY 362
+ + + F +V Y
Sbjct: 379 IKPSMKRFYNLYVMPY 394
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 64/261 (24%), Positives = 115/261 (44%)
Query: 92 QIATLISKY--PRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSL-ENHI 148
QI +L S+ P SH +++L + L+ G L L LL+ L E I
Sbjct: 21 QIRSLSSRILTPINQSHYRKRILLANL--LQRYGFPPSSLQHFLSRNNHLLNSDLVETEI 78
Query: 149 IPTFDFLKGVFQANGNLVYALKQSIRVVNSD-IQKRVVPNMNTLRAHGVPEPHIARLIML 207
+ L + +LV + V+ S+ ++K VP N + HGV + ++
Sbjct: 79 --SLGILLSLKIPQKSLVSLISDCPNVLRSEFLRKWRVPLSNCGK-HGVVSSSAIKSVLE 135
Query: 208 QPPSLVLRAELFKNVVDVIKEMGFEPSSKSFILA-VRSMAMSSKATWQRKKEILISFGWS 266
+ + + F V V+K +GF S+ S IL+ + + ++ +RK E L+ G +
Sbjct: 136 HSSRIGIGPDKFNECVRVLKSLGFCDSTVSRILSSFPGVLLVNEIEIRRKIEFLVGIGIA 195
Query: 267 EDEFRMVFKRQPLFM-MASAKKIRKLMDFFVNKIGLEPSD----IARYPNLLIGSLEKKV 321
D F P + + + +++ L+D F+ K+G D IAR P +L LE
Sbjct: 196 RDNIERFFHVFPEVLGIGTETRLKPLLDEFM-KMGFSKDDVKKEIAREPRVL--GLELGE 252
Query: 322 LPRW-SVLQVLMSKNLLKKDV 341
LPR ++ L + +++ +
Sbjct: 253 LPRCLELINTLKCREVIRVSI 273
>TAIR|locus:2203931 [details] [associations]
symbol:AT1G62490 "AT1G62490" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:KOG1267 EMBL:AC005698 KO:K15032 InterPro:IPR003690
Pfam:PF02536 SMART:SM00733 HOGENOM:HOG000113939 IPI:IPI00533738
PIR:A96651 RefSeq:NP_176438.1 UniGene:At.52326
ProteinModelPortal:Q9SXE8 PRIDE:Q9SXE8 EnsemblPlants:AT1G62490.1
GeneID:842546 KEGG:ath:AT1G62490 TAIR:At1g62490 InParanoid:Q9SXE8
OMA:FEETHIS PhylomeDB:Q9SXE8 Genevestigator:Q9SXE8 Uniprot:Q9SXE8
Length = 334
Score = 140 (54.3 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 64/244 (26%), Positives = 117/244 (47%)
Query: 57 SLEKAISVSKLVKIQDTEK-PNSSIQ-LLTSRGFTKPQIATLISKYPRILSH-DPEKVLK 113
S S + V + D++K N ++ L+ S G K ++A ISK R +P+ VL
Sbjct: 77 SFSTVASAAADVSLIDSQKGKNFTVSYLVDSLGLPK-KLAESISKKFRFEDKANPDSVLS 135
Query: 114 PKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNLVY-ALKQS 172
L S G + ++ P+LL + + +DF+K +A+ + Y L QS
Sbjct: 136 ----LLRSHGFTVSQIS-----IPKLLGKRGHKTLSLYYDFVKESLEADKSSKYETLCQS 186
Query: 173 IRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIML--QPPSLVLRAELFKNVVDVIKEMG 230
N + +KR N++ LR G+P + L++ QP V + F + + EMG
Sbjct: 187 FPQGNLENKKR---NVSVLRELGMPHKLLFPLLISVGQP---VCGKDRFNTSLKKVVEMG 240
Query: 231 FEPSSKSFILAVR-SMAMSSKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIR 289
F+P++ F+ A+ S M+ K T + K + G++ ++ ++FK+ P + S +KI
Sbjct: 241 FDPTTAKFVKALHVSYEMNDK-TIEEKVNVYKMLGFAVEDVWVIFKKWPYSLKYSEEKIT 299
Query: 290 KLMD 293
+ ++
Sbjct: 300 QTIE 303
Score = 113 (44.8 bits), Expect = 0.00094, P = 0.00094
Identities = 37/130 (28%), Positives = 63/130 (48%)
Query: 21 SYARNLKTIIPSVNSISKPSDERSP--TVSFLTHSCGLSLEKAISVSKLVKIQDTEKPNS 78
+++ + T+ + +S ++ TVS+L S GL + A S+SK + +D P+S
Sbjct: 73 AFSNSFSTVASAAADVSLIDSQKGKNFTVSYLVDSLGLPKKLAESISKKFRFEDKANPDS 132
Query: 79 SIQLLTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYL-ESLGISGPDLAKILCP-Y 136
+ LL S GFT QI+ P++L K L +++ ESL + LC +
Sbjct: 133 VLSLLRSHGFTVSQISI-----PKLLGKRGHKTLSLYYDFVKESLEADKSSKYETLCQSF 187
Query: 137 PELLSRSLEN 146
P+ +LEN
Sbjct: 188 PQ---GNLEN 194
>TAIR|locus:2162092 [details] [associations]
symbol:AT5G55580 "AT5G55580" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0048364 GO:GO:0048367
EMBL:AB009050 eggNOG:NOG246142 KO:K15032 InterPro:IPR003690
Pfam:PF02536 SMART:SM00733 UniGene:At.27411 EMBL:AY062691
EMBL:BT000141 IPI:IPI00542422 RefSeq:NP_200369.1
ProteinModelPortal:Q9FM80 SMR:Q9FM80 PRIDE:Q9FM80
EnsemblPlants:AT5G55580.1 GeneID:835652 KEGG:ath:AT5G55580
TAIR:At5g55580 HOGENOM:HOG000084463 InParanoid:Q9FM80 OMA:RPRHRFL
PhylomeDB:Q9FM80 ProtClustDB:CLSN2686991 ArrayExpress:Q9FM80
Genevestigator:Q9FM80 Uniprot:Q9FM80
Length = 496
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 40/161 (24%), Positives = 83/161 (51%)
Query: 31 PSVNSISKPSDERSPTVSFLTHSCGLS---LEKAISVSKLVKIQDTEKP-NSSIQLLTSR 86
PS+ S S + R PT+ +L G+ + K + +S + +Q + N+ L+
Sbjct: 280 PSLFSYSVENSLR-PTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKE 338
Query: 87 -GFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLE 145
G + + ++ K+P++L + + P+I +L S+G+ D+ K+L ++LS SLE
Sbjct: 339 LGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLE 398
Query: 146 NHIIPTFDFLKGVFQANGNLVYALKQSIRVVNSDIQKRVVP 186
+++ P + +L V + N N V+ L + ++ + +R+ P
Sbjct: 399 DNLKPKYMYL--VNELN-NEVHILTKYPMYLSLSLDQRIRP 436
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 43/216 (19%), Positives = 100/216 (46%)
Query: 115 KIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNLVYALKQSIR 174
+++YL S+G+ D+ ++L P++L ++EN++ FL G+ N + + +
Sbjct: 222 RLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPS 281
Query: 175 VVNSDIQKRVVPNMNTLRAH-GVPEPHIARLIMLQPPSLVLRAELFKNV--VDVIKEMGF 231
+ + ++ + P + L G+ E + +++ L P LV R ++ N + + KE+G
Sbjct: 282 LFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGA 341
Query: 232 EPSSKSFILAVRSMAM--SSKATWQRKKEILISFGW-SEDEFRMVFKRQPLFMMASAKKI 288
S ++ + S + + L S G + D +++ + ++ +
Sbjct: 342 PRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNL 401
Query: 289 RKLMDFFVNKIGLEPSDIARYPNLLIGSLEKKVLPR 324
+ + VN++ E + +YP L SL++++ PR
Sbjct: 402 KPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPR 437
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 51/222 (22%), Positives = 91/222 (40%)
Query: 80 IQLLTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPEL 139
+ L S G I ++ + P+IL + E LK I +L LGI + +I+ P L
Sbjct: 223 LDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSL 282
Query: 140 LSRSLENHIIPTFDFL---KGVFQANGNLVYALKQSIRVVNSDIQKRVVPNMNTLRAHGV 196
S S+EN + PT +L G+ + + V L I V DI M + G
Sbjct: 283 FSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNT-RYMFLSKELGA 341
Query: 197 PEPHIARLIMLQPPSLVLRAEL-FKNVVDVIKEMGFEPSSKSFILAVRSMAMSSKATWQR 255
P + +++ P L + F ++ ++ +G S +L + +S
Sbjct: 342 PRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNL 401
Query: 256 KKEILISFGWSEDEFRMVFKRQPLFMMASA-KKIRKLMDFFV 296
K + + +E ++ K P+++ S ++IR F V
Sbjct: 402 KPKYMYLVNELNNEVHILTK-YPMYLSLSLDQRIRPRHRFLV 442
>TAIR|locus:2207420 [details] [associations]
symbol:AT1G78930 "AT1G78930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009507 "chloroplast" evidence=IDA] EMBL:CP002684
GO:GO:0009507 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 EMBL:AK228193 IPI:IPI00543979 RefSeq:NP_178014.2
UniGene:At.34214 ProteinModelPortal:Q0WRV2 SMR:Q0WRV2 PRIDE:Q0WRV2
EnsemblPlants:AT1G78930.1 GeneID:844232 KEGG:ath:AT1G78930
TAIR:At1g78930 HOGENOM:HOG000084735 InParanoid:Q0WRV2 OMA:PHILGCS
PhylomeDB:Q0WRV2 ProtClustDB:CLSN2680664 Genevestigator:Q0WRV2
Uniprot:Q0WRV2
Length = 591
Score = 136 (52.9 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 57/262 (21%), Positives = 115/262 (43%)
Query: 96 LISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELL---SRSLENHIIPTF 152
L+ +PR+L E +KP +E+LES+GI L K+L YP ++ + ++ +
Sbjct: 248 LLESFPRLLLLSEENDMKPMVEFLESIGIPKYCLGKVLLLYPPIMLGKTEEIKRRVATAM 307
Query: 153 DFLKGVFQANGNLVYALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSL 212
+ + V + +G L+ LK +++ IQ+ + + V + I I P L
Sbjct: 308 EKVSVVNKDSGKLL--LKYPW-ILSPSIQENYSHIGSFFYSESVLKMDIDHAIRRWPLLL 364
Query: 213 VLRAELFKNVVDVIKEMGFEPSSKSFILA-VRSMAMSSKATWQRKKEILISFGWSEDEFR 271
A + +V ++G ++ + + + + + L G+ ++
Sbjct: 365 GCSASNMEMMVKEFDKLGVRDKRMGKVIPKMPQLLLCKPQEFLKVVCFLEDLGFQKEIVG 424
Query: 272 MVFKRQP-LFMMASAKKIRKLMDFFVNKIGLE----PSDIARYPNLLIGSLEKKVLPRWS 326
+ R P +F + K ++K + F+ + G+ P I +YP LI +K VLPR
Sbjct: 425 QILCRCPEIFGCSIEKTLQKKL-IFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPR-- 481
Query: 327 VLQVLMSKNLLKKDVNVSLALF 348
L+ LM + ++++ + F
Sbjct: 482 -LKYLMEIGISEREIAFMIRKF 502
Score = 128 (50.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 29/114 (25%), Positives = 57/114 (50%)
Query: 83 LTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSR 142
LT G + +I KYP L +D +K + P+++YL +GIS ++A ++ + +L
Sbjct: 449 LTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLKYLMEIGISEREIAFMIRKFSPILGY 508
Query: 143 SLENHIIPTFDFLKGVFQANGNLVYALKQSIRVVNSDIQKRVVPNMNTLRAHGV 196
S++ + P F+FL + V + + R + ++KR+ P L+ +
Sbjct: 509 SIDKVLRPKFEFLVNSMEKP---VREVIEYPRYFSYSLEKRIKPRFRVLKGRNI 559
>UNIPROTKB|G3MZI9 [details] [associations]
symbol:MTERF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
[GO:0032392 "DNA geometric change" evidence=IEA] [GO:0006393
"termination of mitochondrial transcription" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA]
GO:GO:0042645 GO:GO:0003690 GO:GO:0032392 InterPro:IPR003690
Pfam:PF02536 SMART:SM00733 GeneTree:ENSGT00530000063817 OMA:GLTRKCL
GO:GO:0006393 EMBL:DAAA02009756 Ensembl:ENSBTAT00000063305
Uniprot:G3MZI9
Length = 362
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 59/260 (22%), Positives = 114/260 (43%)
Query: 73 TEKPNSSIQ-LLTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAK 131
T+ +Q L S+G +K IA++IS+YPR ++ PE L + + + S ++
Sbjct: 63 TDTNEQDLQTFLLSKGASKEVIASIISRYPRAMTRTPES-LSNRWDLWRRIVTSDLEIVN 121
Query: 132 ILCPYPELLSRSLEN-HIIPTFDFLKGVFQANGNLVYALKQSIRVV-NS-DIQKRVVPNM 188
IL PE RS +N ++ FL V + +L L + R NS ++ K++V +
Sbjct: 122 ILERSPESFFRSSDNLNLENNIKFLYSVGLTHKDLCRLLTNAPRTFSNSLNLNKQMVEFL 181
Query: 189 NTL---RAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMGFEPSSKSFIL----A 241
+ H P + ++I P L+ + K ++ ++ + + L
Sbjct: 182 QEICLSLGHNGPTDFVRKIIFKNPFILIQSTKRIKANIEFLQSTFCLTNEELLSLICGPG 241
Query: 242 VRSMAMSS---KATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVN- 297
+ + +SS + +++ K+ L S G + E R P + KK +D +
Sbjct: 242 AKILDLSSDCMRRSYRNIKDKLSSLGCTAKEIRKFVLSYPDMIFLGEKKFNDKIDCLIEE 301
Query: 298 KIGLEPSDIARYPNLLIGSL 317
K+ + S I ++P +L S+
Sbjct: 302 KVNI--SQIIKHPRILDSSI 319
>UNIPROTKB|Q99551 [details] [associations]
symbol:MTERF "Transcription termination factor,
mitochondrial" species:9606 "Homo sapiens" [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0006353
"DNA-dependent transcription, termination" evidence=IDA]
[GO:0006393 "termination of mitochondrial transcription"
evidence=IDA;TAS] [GO:0032392 "DNA geometric change" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=TAS] [GO:0005759
"mitochondrial matrix" evidence=TAS] [GO:0006390 "transcription
from mitochondrial promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 GO:GO:0006355 GO:GO:0042645 EMBL:CH471091
EMBL:CH236949 GO:GO:0003690 Reactome:REACT_1788 GO:GO:0032392
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 KO:K15031 EMBL:Y09615
EMBL:AK222730 EMBL:AC003086 EMBL:BC000965 EMBL:BC108648
EMBL:BC130389 EMBL:BC130391 IPI:IPI00016095 RefSeq:NP_008911.1
UniGene:Hs.532216 PDB:3MVA PDB:3MVB PDB:3N6S PDB:3N7Q PDBsum:3MVA
PDBsum:3MVB PDBsum:3N6S PDBsum:3N7Q ProteinModelPortal:Q99551
SMR:Q99551 IntAct:Q99551 STRING:Q99551 PhosphoSite:Q99551
DMDM:12644536 PaxDb:Q99551 PRIDE:Q99551 DNASU:7978
Ensembl:ENST00000351870 GeneID:7978 KEGG:hsa:7978 UCSC:uc003ulc.1
CTD:7978 GeneCards:GC07M091500 HGNC:HGNC:21463 HPA:HPA044894
MIM:602318 neXtProt:NX_Q99551 PharmGKB:PA142671308 eggNOG:NOG328956
HOGENOM:HOG000252957 HOVERGEN:HBG052524 InParanoid:Q99551
OMA:GLTRKCL PhylomeDB:Q99551 ChiTaRS:MTERF EvolutionaryTrace:Q99551
GenomeRNAi:7978 NextBio:30500 ArrayExpress:Q99551 Bgee:Q99551
CleanEx:HS_MTERF Genevestigator:Q99551 GermOnline:ENSG00000127989
GO:GO:0006393 Uniprot:Q99551
Length = 399
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 58/249 (23%), Positives = 109/249 (43%)
Query: 83 LTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSR 142
L S+G +K IA++IS+YPR ++ PE + K + + + S ++ IL PE R
Sbjct: 111 LLSKGASKEVIASIISRYPRAITRTPENLSK-RWDLWRKIVTSDLEIVNILERSPESFFR 169
Query: 143 SLEN-HIIPTFDFLKGVFQANGNLVYALKQSIRVV-NS-DIQKRVVPNMNTLR---AHGV 196
S N ++ FL V L L + R NS D+ K++V + H
Sbjct: 170 SNNNLNLENNIKFLYSVGLTRKCLCRLLTNAPRTFSNSLDLNKQMVEFLQAAGLSLGHND 229
Query: 197 PEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMGFEPSSKSFILAV-----RSMAMSS-- 249
P + ++I P L+ + K ++ ++ F +S+ ++ + + +S+
Sbjct: 230 PADFVRKIIFKNPFILIQSTKRVKANIEFLRST-FNLNSEELLVLICGPGAEILDLSNDY 288
Query: 250 -KATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLEPSDIAR 308
+ ++ KE L S G +E+E + P + + KK +D + + + S I
Sbjct: 289 ARRSYANIKEKLFSLGCTEEEVQKFVLSYPDVIFLAEKKFNDKIDCLMEE-NISISQIIE 347
Query: 309 YPNLLIGSL 317
P +L S+
Sbjct: 348 NPRVLDSSI 356
>TAIR|locus:2087926 [details] [associations]
symbol:AT3G18870 "AT3G18870" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016556 "mRNA modification" evidence=RCA]
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP002039
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000239190 EMBL:BT029467 IPI:IPI00540238
RefSeq:NP_188517.1 UniGene:At.21618 UniGene:At.71275
ProteinModelPortal:Q9LHN2 SMR:Q9LHN2 EnsemblPlants:AT3G18870.1
GeneID:821420 KEGG:ath:AT3G18870 TAIR:At3g18870 eggNOG:NOG268043
InParanoid:Q9LHN2 OMA:PAIFGYS PhylomeDB:Q9LHN2
ProtClustDB:CLSN2684540 Genevestigator:Q9LHN2 Uniprot:Q9LHN2
Length = 274
Score = 92 (37.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 35/141 (24%), Positives = 67/141 (47%)
Query: 96 LISKYPRIL--SHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLE-NHIIPTF 152
++ + PR+ ++D +L + L+S GIS D +++ P+L S + + + + P F
Sbjct: 48 IVPQNPRLAPPANDLSVILSA-VNLLKSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVF 106
Query: 153 DFLKGVFQANGNLVYALKQSI-RVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPS 211
DFL G A+ L + ++ SD++ + P + L+ GV ++ R
Sbjct: 107 DFLTGELGASAEESRGLIVNCPNILFSDVEYCLRPTLVYLKELGVR--NLNRASKTNAHV 164
Query: 212 LVLRAELFKNVVDVIKEMGFE 232
L R E + + +K +GFE
Sbjct: 165 LNTRVEKLRAKMRFLKSIGFE 185
Score = 82 (33.9 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 34/104 (32%), Positives = 45/104 (43%)
Query: 23 ARNLKTIIPSVNSI-SKP-SDERSPTVSFLTHSCGLSLEKAISVSKLVKIQDTEKPNSSI 80
A +L I+ +VN + SK SDE P + FL C +SKL + D
Sbjct: 59 ANDLSVILSAVNLLKSKGISDEDFPRLVFL---CPQLFSPTFDISKLDPVFDFLTGELGA 115
Query: 81 QLLTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGI 124
SRG LI P IL D E L+P + YL+ LG+
Sbjct: 116 SAEESRG--------LIVNCPNILFSDVEYCLRPTLVYLKELGV 151
Score = 76 (31.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/93 (29%), Positives = 43/93 (46%)
Query: 256 KKEILISFGWSEDEFRMVFKRQP-LFMMASAKKIRKLMDFFVNKIGLEPSDIARYPNLLI 314
K L S G+ +E V R P +F + +R +F V + E ++ ++P
Sbjct: 175 KMRFLKSIGFEHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFA 234
Query: 315 GSLEKKVLPR-WSVLQVLMSKNLLKKDVNVSLA 346
SL K++ PR W +L KK+V VSL+
Sbjct: 235 FSLGKRIRPRHW---------HLKKKNVRVSLS 258
>UNIPROTKB|F1S318 [details] [associations]
symbol:MTERF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
[GO:0032392 "DNA geometric change" evidence=IEA] [GO:0006393
"termination of mitochondrial transcription" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA]
GO:GO:0042645 GO:GO:0003690 GO:GO:0032392 InterPro:IPR003690
Pfam:PF02536 SMART:SM00733 GeneTree:ENSGT00530000063817 OMA:GLTRKCL
GO:GO:0006393 EMBL:CU693404 Ensembl:ENSSSCT00000016682
Uniprot:F1S318
Length = 445
Score = 129 (50.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 68/306 (22%), Positives = 127/306 (41%)
Query: 34 NSISKPSDERSPTVSFLTHSCGLSLEKAISVSKLVKIQDTEKPNSSIQLLTSRGFTKPQI 93
N+ S+P + LT + + K + E+ S L S+G +K I
Sbjct: 104 NADSEPLKNEELLNNLLTLGVDIDMAKKRQPGVFNRTGTNEQDLKSF--LLSKGASKEVI 161
Query: 94 ATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLEN-HIIPTF 152
A++IS+YPR ++ PE L + + + S ++ IL PE RS N ++
Sbjct: 162 ASIISRYPRAMTRTPES-LSNRWDLWRRIMTSDLEIVNILERSPESFFRSSNNLNLENNI 220
Query: 153 DFLKGVFQANGNLVYALKQSIRVV-NS-DIQKRVVPNMNTL---RAHGVPEPHIARLIML 207
FL + L L + R NS D+ K++V + + H P I ++I
Sbjct: 221 KFLSSIGLTRKCLCRLLTNAPRTFSNSLDLNKQMVEFLKEVCLSLGHSDPTDFIRKIIFK 280
Query: 208 QPPSLVLRAELFKNVVDVIKEMGFEPSSKSFILAV-----RSMAMSSKAT---WQRKKEI 259
P L+ + K ++ ++ F ++K + + + + +S+ T + KE
Sbjct: 281 NPFILIQSTKRVKANIEFLQST-FNLNNKELLALICGPGTKILELSNDYTRRNYANIKEK 339
Query: 260 LISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVN-KIGLEPSDIARYPNLL---IG 315
L S G + ++ + P + KK +D + KI + S I P +L +
Sbjct: 340 LFSLGCTAEQVQKFVLSYPDVVFLGEKKFNHKVDCLIEEKISI--SQIMENPRILDSSVS 397
Query: 316 SLEKKV 321
+L+K++
Sbjct: 398 TLKKRI 403
>MGI|MGI:1918240 [details] [associations]
symbol:Mterf "mitochondrial transcription termination
factor" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006353
"DNA-dependent transcription, termination" evidence=ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006393 "termination of mitochondrial
transcription" evidence=ISO] [GO:0032392 "DNA geometric change"
evidence=ISO] [GO:0042645 "mitochondrial nucleoid" evidence=ISO]
MGI:MGI:1918240 GO:GO:0005739 GO:GO:0006355 GO:GO:0003690
GO:GO:0032392 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
eggNOG:NOG285349 KO:K15031 GeneTree:ENSGT00530000063817 CTD:7978
HOGENOM:HOG000252957 HOVERGEN:HBG052524 GO:GO:0006393 EMBL:AY726770
EMBL:BC038058 EMBL:BC051251 EMBL:BC082778 EMBL:BC094442
EMBL:AK049308 IPI:IPI00109525 RefSeq:NP_001013041.2
RefSeq:NP_742147.1 UniGene:Mm.489094 UniGene:Mm.99593
ProteinModelPortal:Q8CHZ9 SMR:Q8CHZ9 IntAct:Q8CHZ9 STRING:Q8CHZ9
PhosphoSite:Q8CHZ9 PRIDE:Q8CHZ9 Ensembl:ENSMUST00000044746
Ensembl:ENSMUST00000117463 GeneID:545725 KEGG:mmu:545725
UCSC:uc008why.1 InParanoid:Q8CHZ9 OrthoDB:EOG4TXBS6 NextBio:412932
Bgee:Q8CHZ9 CleanEx:MM_MTERF Genevestigator:Q8CHZ9
GermOnline:ENSMUSG00000040429 Uniprot:Q8CHZ9
Length = 379
Score = 125 (49.1 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 57/249 (22%), Positives = 107/249 (42%)
Query: 83 LTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSR 142
L S+G + I ++IS+YPR ++ PE + K + + + S ++ IL PE R
Sbjct: 93 LLSKGASDKVIGSIISRYPRAITRTPESLSK-RWDLWRKIMASDLEIVNILERSPESFFR 151
Query: 143 SLEN-HIIPTFDFLKGVFQANGNLVYALKQSIRVV-NS-DIQKRVVPNMNTLR---AHGV 196
S N ++ FL V + L L + R NS ++ K++V + H
Sbjct: 152 SNNNLNLENNIKFLCSVGLTHKCLCRLLTNAPRTFSNSLNLNKQMVEFLQETGMSLGHND 211
Query: 197 PEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMGFEPSSKSFILAV-----RSMAMSSKA 251
P + ++I P L+ + K ++ ++ F + + +L + R + +S+
Sbjct: 212 PRDFVRKIISKNPSILIQSTKRVKTNIEFLQST-FNLNKRDLLLLICGPGARILDLSNDC 270
Query: 252 T---WQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLEPSDIAR 308
T + +E L+S G SE+E + + S KK +D + + + S I
Sbjct: 271 TKKNYTNIRERLLSLGCSEEEVQRFVLSYLNMVFLSEKKFNDKIDCLIEE-KISASQIIE 329
Query: 309 YPNLLIGSL 317
P +L S+
Sbjct: 330 NPRILDSSI 338
>UNIPROTKB|Q5R9U8 [details] [associations]
symbol:MTERF "Transcription termination factor,
mitochondrial" species:9601 "Pongo abelii" [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0006353
"DNA-dependent transcription, termination" evidence=ISS]
[GO:0006393 "termination of mitochondrial transcription"
evidence=ISS] [GO:0032392 "DNA geometric change" evidence=ISS]
GO:GO:0005739 GO:GO:0006355 GO:GO:0003690 GO:GO:0032392
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 HOVERGEN:HBG052524
GO:GO:0006393 EMBL:CR859284 UniGene:Pab.1253 InParanoid:Q5R9U8
Uniprot:Q5R9U8
Length = 398
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 59/249 (23%), Positives = 110/249 (44%)
Query: 83 LTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSR 142
L S+G +K IA++IS+YPR ++ PE + K + + + S ++ IL PE R
Sbjct: 111 LLSKGASKEVIASIISRYPRAITRTPENLSK-RWDLWRKIVTSDLEIVNILERSPESFFR 169
Query: 143 SLEN-HIIPTFDFLKGVFQANGNLVYALKQSIRVV-NS-DIQKRVVPNMNTLR---AHGV 196
S N ++ FL V L L + R NS D+ K++V + H
Sbjct: 170 SNNNLNLENNIKFLYSVGLTRKCLCRLLTNAPRTFSNSLDLNKQMVEFLQAAGLSLGHND 229
Query: 197 PEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMGFEPSSKSFILAV-----RSMAMSS-- 249
P + R I+L+ L+ + K ++ ++ F +S+ ++ + + +S+
Sbjct: 230 PADFV-RKIILKTLYLIQSTKRVKANIEFLRST-FNLNSEELLVLICGPGAEILDLSNDY 287
Query: 250 -KATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLEPSDIAR 308
+ ++ KE L S G +E+E + P + + KK +D + + + S I
Sbjct: 288 ARRSYANIKEKLFSLGCTEEEVQKFVLSYPDVIFLAEKKFNDKIDCLMEE-NISISQIIE 346
Query: 309 YPNLLIGSL 317
P +L S+
Sbjct: 347 NPRVLDSSI 355
>RGD|621318 [details] [associations]
symbol:Mterf "mitochondrial transcription termination factor"
species:10116 "Rattus norvegicus" [GO:0003690 "double-stranded DNA
binding" evidence=ISO;ISS] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006353 "DNA-dependent transcription,
termination" evidence=ISO;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006393
"termination of mitochondrial transcription" evidence=ISO;ISS]
[GO:0032392 "DNA geometric change" evidence=ISO;ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] RGD:621318 GO:GO:0005739
GO:GO:0006355 GO:GO:0003690 GO:GO:0032392 InterPro:IPR003690
Pfam:PF02536 SMART:SM00733 KO:K15031 CTD:7978 HOGENOM:HOG000252957
HOVERGEN:HBG052524 GO:GO:0006393 OrthoDB:EOG4TXBS6 EMBL:AJ292524
IPI:IPI00189117 RefSeq:NP_445951.1 UniGene:Rn.64629 PRIDE:Q9EPI8
GeneID:85261 KEGG:rno:85261 UCSC:RGD:621318 eggNOG:NOG320618
InParanoid:Q9EPI8 NextBio:617388 Genevestigator:Q9EPI8
GermOnline:ENSRNOG00000007899 Uniprot:Q9EPI8
Length = 374
Score = 115 (45.5 bits), Expect = 0.00069, P = 0.00069
Identities = 56/249 (22%), Positives = 106/249 (42%)
Query: 83 LTSRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLSR 142
L S+G + I ++IS+YPR ++ PE + K + + + S ++ IL PE R
Sbjct: 88 LLSKGASDKVIGSIISRYPRAITRTPESLSK-RWDLWREIMASDLEIVNILERSPESFFR 146
Query: 143 SLEN-HIIPTFDFLKGVFQANGNLVYALKQSIRVV-NS-DIQKRVVPNMNTLR---AHGV 196
S N ++ FL V + L L + R NS ++ K++V + H
Sbjct: 147 SNNNLNLENNIKFLCSVGLTHKCLCRLLTSAPRTFSNSLNLNKQMVEFLQETGISLGHNN 206
Query: 197 PEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMGFEPSSKSFILAV-----RSMAMSSKA 251
P + ++I P L+ + K ++ ++ F + +L + R + +S+
Sbjct: 207 PTDFVRKIISKNPSILIQSTKRVKTNIEFLQST-FNLDKEDLLLLICGPGARILDLSNDC 265
Query: 252 T---WQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLEPSDIAR 308
T + K+ L+S G +E+E + + S KK +D + + + S I
Sbjct: 266 TKRNYTNIKKRLLSLGCTEEEVQKFVLSYLNMIFLSEKKFNDKIDCLLEE-KISTSQILE 324
Query: 309 YPNLLIGSL 317
P +L S+
Sbjct: 325 NPRVLDSSI 333
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 392 377 0.00089 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 607 (65 KB)
Total size of DFA: 210 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.58u 0.09s 31.67t Elapsed: 00:00:02
Total cpu time: 31.59u 0.09s 31.68t Elapsed: 00:00:02
Start: Sat May 11 12:28:55 2013 End: Sat May 11 12:28:57 2013