Query 046450
Match_columns 392
No_of_seqs 220 out of 1267
Neff 8.2
Searched_HMMs 13730
Date Mon Mar 25 21:35:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046450.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046450hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1oqya1 a.5.2.1 (A:160-200) DN 69.3 1.6 0.00011 26.3 2.5 26 252-277 3-28 (41)
2 d2g3qa1 a.5.2.1 (A:1339-1381) 55.3 3.8 0.00028 24.5 2.3 23 256-278 7-29 (43)
3 d1whca_ a.5.2.1 (A:) UBA/UBX 3 44.1 16 0.0012 23.7 4.5 44 38-85 4-47 (64)
4 d2cpwa1 a.5.2.1 (A:8-58) Cbl-i 42.4 19 0.0014 22.2 4.4 40 41-84 10-49 (51)
5 d2hsga1 a.35.1.5 (A:2-58) Gluc 38.2 22 0.0016 22.4 4.3 42 190-234 7-48 (57)
6 d1cuka1 a.5.1.1 (A:156-203) DN 37.9 39 0.0028 20.4 5.3 34 252-286 4-37 (48)
7 d1wgna_ a.5.2.1 (A:) Ubiquitin 35.5 10 0.00075 24.7 2.3 38 254-298 20-57 (63)
8 d1wiva_ a.5.2.1 (A:) Ubiquitin 34.9 17 0.0012 24.3 3.5 37 255-298 31-67 (73)
9 d1vg5a_ a.5.2.1 (A:) Rhomboid 33.9 14 0.001 24.7 2.9 38 254-298 30-67 (73)
10 d1uxda_ a.35.1.5 (A:) Fructose 31.2 17 0.0013 23.1 2.9 43 192-234 8-50 (59)
11 d1efaa1 a.35.1.5 (A:2-60) Lac 31.2 32 0.0023 21.8 4.2 41 191-234 9-49 (59)
12 d1jmxa1 a.3.1.7 (A:2-85) Quino 31.1 40 0.0029 22.9 5.1 49 249-313 32-81 (84)
13 d1k6ya1 a.4.10.1 (A:1-46) N-te 29.1 25 0.0018 21.2 3.2 25 256-280 18-43 (46)
14 d1wjia_ a.5.2.1 (A:) Tudor dom 27.0 27 0.002 22.4 3.4 39 254-299 10-48 (63)
15 d1efaa1 a.35.1.5 (A:2-60) Lac 26.5 29 0.0021 22.0 3.3 46 85-134 11-56 (59)
16 d2crna1 a.5.2.1 (A:8-58) Suppr 24.6 34 0.0025 20.9 3.3 40 43-86 2-41 (51)
17 d1pbya1 a.3.1.7 (A:1-85) Quino 23.7 64 0.0047 21.8 5.1 43 249-306 32-74 (85)
18 d1rw1a_ c.47.1.12 (A:) Hypothe 21.6 24 0.0018 25.3 2.5 22 123-144 72-93 (114)
19 d1j9ba_ c.47.1.12 (A:) Arsenat 21.5 28 0.002 26.1 2.9 19 161-179 75-93 (138)
20 d2dnaa1 a.5.2.1 (A:12-61) Ubiq 20.9 14 0.00099 22.9 0.7 17 217-233 6-22 (50)
No 1
>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.34 E-value=1.6 Score=26.28 Aligned_cols=26 Identities=8% Similarity=0.316 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhC
Q 046450 252 TWQRKKEILISFGWSEDEFRMVFKRQ 277 (392)
Q Consensus 252 ~l~~kv~fL~~lG~s~~ei~~~i~~~ 277 (392)
..+.+|+-|.++||+++++.+.+.++
T Consensus 3 ~~e~~i~~L~~MGF~~~~a~~AL~~~ 28 (41)
T d1oqya1 3 EYETMLTEIMSMGYERERVVAALRAS 28 (41)
T ss_dssp THHHHHHHHHTTTCCSHHHHHHHHHS
T ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 35667788888888888888777764
No 2
>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=55.27 E-value=3.8 Score=24.50 Aligned_cols=23 Identities=22% Similarity=0.341 Sum_probs=18.3
Q ss_pred HHHHHHHcCCCHHHHHHHHHhCC
Q 046450 256 KKEILISFGWSEDEFRMVFKRQP 278 (392)
Q Consensus 256 kv~fL~~lG~s~~ei~~~i~~~P 278 (392)
-|+-|..|||++++..+.+.++-
T Consensus 7 ai~eL~~MGF~e~~A~~AL~k~~ 29 (43)
T d2g3qa1 7 AVEELSGMGFTEEEAHNALEKCN 29 (43)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCHHHHHHHHHHcC
Confidence 46677889999999988888753
No 3
>d1whca_ a.5.2.1 (A:) UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=44.07 E-value=16 Score=23.71 Aligned_cols=44 Identities=14% Similarity=0.158 Sum_probs=29.4
Q ss_pred CCCCCCCchHHHhHhhcCCCHHHHHhhcccccccCCCChhhHHHhhhh
Q 046450 38 KPSDERSPTVSFLTHSCGLSLEKAISVSKLVKIQDTEKPNSSIQLLTS 85 (392)
Q Consensus 38 ~~~~~~~~~v~~L~~~~Gls~~~~~~i~~~~~~~~~~~~~~~l~~L~~ 85 (392)
+++..+..++.-|+ +.||+.+.+.+....- ...+++..++||-+
T Consensus 4 ~~s~~d~~~l~~L~-~MGF~~~~a~~AL~~t---~n~~~e~A~~Wl~~ 47 (64)
T d1whca_ 4 GSSGAELTALESLI-EMGFPRGRAEKALALT---GNQGIEAAMDWLME 47 (64)
T ss_dssp CCCCCCCCHHHHHH-TTTCCHHHHHHHHHHH---TSCCHHHHHHHHHH
T ss_pred CCCccCHHHHHHHH-HcCCCHHHHHHHHHHh---CCCCHHHHHHHHHH
Confidence 34455666788886 7899998888875431 11357777888765
No 4
>d2cpwa1 a.5.2.1 (A:8-58) Cbl-interacting protein p70, STS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.38 E-value=19 Score=22.21 Aligned_cols=40 Identities=13% Similarity=0.113 Sum_probs=27.0
Q ss_pred CCCCchHHHhHhhcCCCHHHHHhhcccccccCCCChhhHHHhhh
Q 046450 41 DERSPTVSFLTHSCGLSLEKAISVSKLVKIQDTEKPNSSIQLLT 84 (392)
Q Consensus 41 ~~~~~~v~~L~~~~Gls~~~~~~i~~~~~~~~~~~~~~~l~~L~ 84 (392)
-+++.++..|+ +.||+.+.+.+..... ...+++..++||-
T Consensus 10 ~~~~~~l~~L~-~MGF~~~~a~~AL~~t---~n~~ve~A~~WLl 49 (51)
T d2cpwa1 10 IKHGSALDVLL-SMGFPRARAQKALAST---GGRSVQTACDWLF 49 (51)
T ss_dssp SSCCCHHHHHH-HHTCCHHHHHHHHHHT---TTSCHHHHHHHHH
T ss_pred CCCHHHHHHHH-HcCCCHHHHHHHHHHH---CCCCHHHHHHHHH
Confidence 35556788886 7899999888875431 1135777777764
No 5
>d2hsga1 a.35.1.5 (A:2-58) Glucose-resistance amylase regulator CcpA, N-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=38.22 E-value=22 Score=22.44 Aligned_cols=42 Identities=21% Similarity=0.462 Sum_probs=30.4
Q ss_pred HHHHCCCCchhhhcccccCCceeeechhhHHHHHHHHHHhCCCCC
Q 046450 190 TLRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMGFEPS 234 (392)
Q Consensus 190 ~L~~lGv~~~~i~~ll~~~P~il~~~~~~~~~~v~~L~~lG~~~~ 234 (392)
.-+.+|++..-+.+.+...|.+ +.+.-+...+..+++|+.++
T Consensus 7 vA~~agvS~~TVSr~Ln~~~~V---s~~tr~rV~~aa~~lgY~pn 48 (57)
T d2hsga1 7 VAREASVSMATVSRVVNGNPNV---KPSTRKKVLETIERLGYRPN 48 (57)
T ss_dssp HHHHTTSCHHHHHHHHTTCTTS---CHHHHHHHHHHHHHHTCCSC
T ss_pred HHHHHCcCHHHHHHHhCCCCcC---CHHHHHHHHHHHHHHCcCCC
Confidence 3456899999988888877753 55556666666678888876
No 6
>d1cuka1 a.5.1.1 (A:156-203) DNA helicase RuvA subunit, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=37.86 E-value=39 Score=20.44 Aligned_cols=34 Identities=18% Similarity=0.177 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhCCccccccHH
Q 046450 252 TWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAK 286 (392)
Q Consensus 252 ~l~~kv~fL~~lG~s~~ei~~~i~~~P~iL~~s~e 286 (392)
...+-++-|..+|++..|+.+++.+-.. =..+.|
T Consensus 4 ~~~eAi~AL~~LGY~~~ea~~av~~i~~-~~~s~E 37 (48)
T d1cuka1 4 AEQEAVARLVALGYKPQEASRMVSKIAR-PDASSE 37 (48)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHSCC-SSCCHH
T ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhcC-CCCCHH
Confidence 3456677788999999999999987543 134444
No 7
>d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.52 E-value=10 Score=24.68 Aligned_cols=38 Identities=16% Similarity=0.424 Sum_probs=28.5
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHhCCccccccHHHHHHHHHHHHHh
Q 046450 254 QRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNK 298 (392)
Q Consensus 254 ~~kv~fL~~lG~s~~ei~~~i~~~P~iL~~s~e~L~~~~~fL~~~ 298 (392)
++.|+-|..|||+++++.+.+..+= .++..-++||...
T Consensus 20 e~~v~~L~~MGF~~~~a~~AL~~~~-------~n~e~A~~~Lls~ 57 (63)
T d1wgna_ 20 RQCVETVVNMGYSYECVLRAMKKKG-------ENIEQILDYLFAH 57 (63)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHC-------SCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHcC-------CCHHHHHHHHHhC
Confidence 5678888999999999888777631 1467778888764
No 8
>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=34.92 E-value=17 Score=24.29 Aligned_cols=37 Identities=32% Similarity=0.511 Sum_probs=27.1
Q ss_pred HHHHHHHHcCCCHHHHHHHHHhCCccccccHHHHHHHHHHHHHh
Q 046450 255 RKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNK 298 (392)
Q Consensus 255 ~kv~fL~~lG~s~~ei~~~i~~~P~iL~~s~e~L~~~~~fL~~~ 298 (392)
..|.-|.+|||+++++.+.+..+- .++..-++||.+.
T Consensus 31 ~~i~~L~~MGF~~~~a~~AL~~~~-------~n~e~Av~~Lls~ 67 (73)
T d1wiva_ 31 SSVDTLLSFGFAEDVARKALKASG-------GDIEKATDWVFNN 67 (73)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHTT-------SCHHHHHHHHHHS
T ss_pred HHHHHHHhcCCCHHHHHHHHHHcC-------CCHHHHHHHHHcC
Confidence 456777889999998888887752 1466678888763
No 9
>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=33.91 E-value=14 Score=24.73 Aligned_cols=38 Identities=5% Similarity=0.335 Sum_probs=25.4
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHhCCccccccHHHHHHHHHHHHHh
Q 046450 254 QRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNK 298 (392)
Q Consensus 254 ~~kv~fL~~lG~s~~ei~~~i~~~P~iL~~s~e~L~~~~~fL~~~ 298 (392)
++.|+-|..|||+++++.+.+..+- .++..-++||...
T Consensus 30 ee~i~~L~~MGF~~~~a~~AL~~~~-------~n~e~A~~~Ll~~ 67 (73)
T d1vg5a_ 30 EEQIQKLVAMGFDRTQVEVALAAAD-------DDLTVAVEILMSQ 67 (73)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHHT-------SCHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHhC-------CCHHHHHHHHHhC
Confidence 3456667888888888877766521 2466677777764
No 10
>d1uxda_ a.35.1.5 (A:) Fructose repressor (FruR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=31.25 E-value=17 Score=23.13 Aligned_cols=43 Identities=19% Similarity=0.345 Sum_probs=21.9
Q ss_pred HHCCCCchhhhcccccCCceeeechhhHHHHHHHHHHhCCCCC
Q 046450 192 RAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMGFEPS 234 (392)
Q Consensus 192 ~~lGv~~~~i~~ll~~~P~il~~~~~~~~~~v~~L~~lG~~~~ 234 (392)
+.+|++..-+..++.-.|.-...+++.-+...+..+++|+.++
T Consensus 8 ~~agvS~sTVSrvLn~~~~~~~vs~~tr~rV~~~a~~lgY~pn 50 (59)
T d1uxda_ 8 RLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPN 50 (59)
T ss_dssp HHHTSCTTHHHHHHHTCGGGTTCTTTTHHHHHHHHHHHTCCCC
T ss_pred HHHCcCHHHHHHHHcCCCCcCcCCHHHHHHHHHHHHHHCCCcC
Confidence 3456666666666554443222244444444455556666655
No 11
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=31.16 E-value=32 Score=21.81 Aligned_cols=41 Identities=17% Similarity=0.274 Sum_probs=29.4
Q ss_pred HHHCCCCchhhhcccccCCceeeechhhHHHHHHHHHHhCCCCC
Q 046450 191 LRAHGVPEPHIARLIMLQPPSLVLRAELFKNVVDVIKEMGFEPS 234 (392)
Q Consensus 191 L~~lGv~~~~i~~ll~~~P~il~~~~~~~~~~v~~L~~lG~~~~ 234 (392)
-+.+|++..-+...+...|.+ +++.-+...+..+++|+.++
T Consensus 9 A~~agvS~sTVSr~l~~~~~v---s~~tr~rI~~~a~~lgY~pn 49 (59)
T d1efaa1 9 AEYAGVSYQTVSRVVNQASHV---SAKTREKVEAAMAELNYIPN 49 (59)
T ss_dssp HHTTTSCHHHHHHHHTTCSSC---CTHHHHHHHHHHHHHTCCCC
T ss_pred HHHHCCCHHHHHHHHCCCCcC---CHHHHHHHHHHHHHHCCCcC
Confidence 345888888888888766653 55666666666778888876
No 12
>d1jmxa1 a.3.1.7 (A:2-85) Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 {Pseudomonas putida [TaxId: 303]}
Probab=31.06 E-value=40 Score=22.93 Aligned_cols=49 Identities=20% Similarity=0.350 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHHH-HcCCCHHHHHHHHHhCCccccccHHHHHHHHHHHHHhhCCChhhHhcCCccc
Q 046450 249 SKATWQRKKEILI-SFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLEPSDIARYPNLL 313 (392)
Q Consensus 249 s~~~l~~kv~fL~-~lG~s~~ei~~~i~~~P~iL~~s~e~L~~~~~fL~~~~G~~~~~i~~~P~lL 313 (392)
+.+.|...|+.++ ..|. -++.+.....++||.+..|+.+++-...+.+|
T Consensus 32 t~~~W~~~V~~M~~~~Ga----------------~l~~~e~~~Iv~YLa~~yG~~p~e~~~~r~~~ 81 (84)
T d1jmxa1 32 TPEGWLMSIARMQVMHGL----------------QISDDDRRTLVKYLADKQGLAPSETDGVRYAM 81 (84)
T ss_dssp CHHHHHHHHHHHHHHHCC----------------CCCHHHHHHHHHHHHHHTCCCGGGSTTCTTTT
T ss_pred CHHHHHHHHHHHHHHcCC----------------CCCHHHHHHHHHHHHHHcCCCccccccccccc
Confidence 5566777766665 3342 13444556789999999999988865544443
No 13
>d1k6ya1 a.4.10.1 (A:1-46) N-terminal Zn binding domain of HIV integrase {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=29.14 E-value=25 Score=21.23 Aligned_cols=25 Identities=4% Similarity=-0.048 Sum_probs=21.3
Q ss_pred HHHHHH-HcCCCHHHHHHHHHhCCcc
Q 046450 256 KKEILI-SFGWSEDEFRMVFKRQPLF 280 (392)
Q Consensus 256 kv~fL~-~lG~s~~ei~~~i~~~P~i 280 (392)
....|. ++|++..+.+.+|..||..
T Consensus 18 n~~~L~~~F~ip~~vAr~IV~~C~~C 43 (46)
T d1k6ya1 18 NWRAMASDFNLPPVVAKEIVASCDKC 43 (46)
T ss_dssp CHHHHHHHHTCCHHHHHHHHHHCTTC
T ss_pred CHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 345677 8999999999999999975
No 14
>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.99 E-value=27 Score=22.39 Aligned_cols=39 Identities=8% Similarity=0.271 Sum_probs=29.9
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHhCCccccccHHHHHHHHHHHHHhh
Q 046450 254 QRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKI 299 (392)
Q Consensus 254 ~~kv~fL~~lG~s~~ei~~~i~~~P~iL~~s~e~L~~~~~fL~~~~ 299 (392)
...++-|..+||+++.+.+.+..+- ..+...++||.+..
T Consensus 10 ~~~v~~L~~MGF~~~~a~~AL~~~~-------~~~e~A~~wL~~~~ 48 (63)
T d1wjia_ 10 EKALKHITEMGFSKEASRQALMDNG-------NNLEAALNVLLTSN 48 (63)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHTT-------SCHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHhC-------CCHHHHHHHHHHCC
Confidence 3457778899999999988887752 25778889999853
No 15
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.52 E-value=29 Score=22.05 Aligned_cols=46 Identities=9% Similarity=0.153 Sum_probs=23.7
Q ss_pred hCCCChHHHHHHHHhCCceeccCcCCchhHHHHHHHhCCCCchhHHHhhh
Q 046450 85 SRGFTKPQIATLISKYPRILSHDPEKVLKPKIEYLESLGISGPDLAKILC 134 (392)
Q Consensus 85 ~lGl~~~~i~~ll~~~P~lL~~~~~~~l~p~v~fL~~lGls~~~l~~il~ 134 (392)
..|++...+.+++...|.+ +++ +-.-..+..+++|..+..+++.+.
T Consensus 11 ~agvS~sTVSr~l~~~~~v---s~~-tr~rI~~~a~~lgY~pn~~Ar~L~ 56 (59)
T d1efaa1 11 YAGVSYQTVSRVVNQASHV---SAK-TREKVEAAMAELNYIPNRVAQQLA 56 (59)
T ss_dssp TTTSCHHHHHHHHTTCSSC---CTH-HHHHHHHHHHHHTCCCCHHHHHHT
T ss_pred HHCCCHHHHHHHHCCCCcC---CHH-HHHHHHHHHHHHCCCcCHHHHHHh
Confidence 3566666666666555543 222 222333455566666666555543
No 16
>d2crna1 a.5.2.1 (A:8-58) Suppressor of T-cell receptor signaling 2 (STS-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.60 E-value=34 Score=20.95 Aligned_cols=40 Identities=10% Similarity=0.190 Sum_probs=24.9
Q ss_pred CCchHHHhHhhcCCCHHHHHhhcccccccCCCChhhHHHhhhhC
Q 046450 43 RSPTVSFLTHSCGLSLEKAISVSKLVKIQDTEKPNSSIQLLTSR 86 (392)
Q Consensus 43 ~~~~v~~L~~~~Gls~~~~~~i~~~~~~~~~~~~~~~l~~L~~l 86 (392)
+|..|.-|+ +.||+...+.++...-. ..+++..++||-+.
T Consensus 2 ~p~~v~~L~-~MGF~~~~a~~Al~~t~---n~~ve~A~~Wl~~h 41 (51)
T d2crna1 2 SPSLLEPLL-AMGFPVHTALKALAATG---RKTAEEALAWLHDH 41 (51)
T ss_dssp SCSSHHHHH-HTSCCHHHHHHHHHHHT---SCCHHHHHHHHHHH
T ss_pred CHHHHHHHH-HcCCCHHHHHHHHHHHC---CCCHHHHHHHHHHc
Confidence 345677775 67888888888653211 13566677776643
No 17
>d1pbya1 a.3.1.7 (A:1-85) Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 {Paracoccus denitrificans [TaxId: 266]}
Probab=23.74 E-value=64 Score=21.84 Aligned_cols=43 Identities=7% Similarity=0.258 Sum_probs=28.3
Q ss_pred CHHHHHHHHHHHHHcCCCHHHHHHHHHhCCccccccHHHHHHHHHHHHHhhCCChhhH
Q 046450 249 SKATWQRKKEILISFGWSEDEFRMVFKRQPLFMMASAKKIRKLMDFFVNKIGLEPSDI 306 (392)
Q Consensus 249 s~~~l~~kv~fL~~lG~s~~ei~~~i~~~P~iL~~s~e~L~~~~~fL~~~~G~~~~~i 306 (392)
+.+.|...|+.++ ..+.. .++.+.....++||.+..|+.+++-
T Consensus 32 t~~~W~~~V~~M~-------------~~~Ga--~l~~~e~~~Iv~YLa~~yG~~p~e~ 74 (85)
T d1pbya1 32 TPEGWDMTVTRMM-------------RNHGV--ALEPEERAAIVRHLSDTRGLSLAET 74 (85)
T ss_dssp CHHHHHHHHHHHH-------------HHSCC--CCCHHHHHHHHHHHHHHSCCCSGGG
T ss_pred CHHHHHHHHHHHH-------------HHcCC--CCCHHHHHHHHHHHHHHcCCCcccc
Confidence 5566776666665 22221 1355556778999999999988774
No 18
>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=21.56 E-value=24 Score=25.32 Aligned_cols=22 Identities=9% Similarity=0.391 Sum_probs=12.3
Q ss_pred CCCchhHHHhhhcCcccccccc
Q 046450 123 GISGPDLAKILCPYPELLSRSL 144 (392)
Q Consensus 123 Gls~~~l~~il~~~P~lL~~~~ 144 (392)
.++.+++..++..+|.++.+++
T Consensus 72 ~ls~~e~i~~i~~~P~LikRPI 93 (114)
T d1rw1a_ 72 DLDEAKAIELMLAQPSMIKRPV 93 (114)
T ss_dssp TCCHHHHHHHHHHCGGGBCSCE
T ss_pred cccHHHHHHHHHhCcceEeCCE
Confidence 3455555555666666555554
No 19
>d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}
Probab=21.50 E-value=28 Score=26.08 Aligned_cols=19 Identities=16% Similarity=0.205 Sum_probs=9.6
Q ss_pred CCchHHHHHhhCcceeccC
Q 046450 161 ANGNLVYALKQSIRVVNSD 179 (392)
Q Consensus 161 ~~~~i~~il~~~P~lL~~s 179 (392)
+++++..++.++|.++-..
T Consensus 75 s~~e~i~ll~~~P~LikRP 93 (138)
T d1j9ba_ 75 TDDQLIDFMLQHPILINRP 93 (138)
T ss_dssp CHHHHHHHHHHSGGGBCSC
T ss_pred CHHHHHHHHHhCchhEecC
Confidence 3445555555555555443
No 20
>d2dnaa1 a.5.2.1 (A:12-61) Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.86 E-value=14 Score=22.93 Aligned_cols=17 Identities=24% Similarity=0.503 Sum_probs=9.9
Q ss_pred hhHHHHHHHHHHhCCCC
Q 046450 217 ELFKNVVDVIKEMGFEP 233 (392)
Q Consensus 217 ~~~~~~v~~L~~lG~~~ 233 (392)
+++..-++.|+++||..
T Consensus 6 ~ry~~QL~qL~~MGF~d 22 (50)
T d2dnaa1 6 VRFSKEMECLQAMGFVN 22 (50)
T ss_dssp HHTHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 35555566666666654
Done!