Your job contains 1 sequence.
>046451
MACIKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE
SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS
RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVS
WNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED
SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV
SELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKW
YKRPAGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGMVDSSQQYYQEPVQS
PLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAPAPAP
VTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQIGA
VPGPKMPNVVAPTPTPTGFMPMSGSGVVQRPGMGSMQPASPQSVPVQPAVTPAAPPPTIQ
TVDTSNVPAHQKPVINTLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGD
ISKNAADKLVQLCQALDNNDFGTALQIQVLLTTSDWDECNFWLATLKRMIKTRQNVRLS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046451
(719 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2087433 - symbol:AT3G63460 "AT3G63460" species... 1710 4.7e-262 2
TAIR|locus:2034990 - symbol:AT1G18830 "AT1G18830" species... 1320 1.2e-190 3
UNIPROTKB|Q5F3X8 - symbol:SEC31A "Protein transport prote... 706 8.3e-93 4
UNIPROTKB|F1NEB4 - symbol:SEC31A "Protein transport prote... 707 1.7e-92 4
DICTYBASE|DDB_G0270992 - symbol:sec31 "putative transport... 689 6.1e-90 4
MGI|MGI:2685187 - symbol:Sec31b "Sec31 homolog B (S. cere... 776 7.2e-89 3
RGD|1598329 - symbol:Sec31b "SEC31 homolog B (S. cerevisi... 710 7.6e-88 4
UNIPROTKB|B7ZL00 - symbol:SEC31A "Protein transport prote... 694 2.2e-87 3
MGI|MGI:1916412 - symbol:Sec31a "Sec31 homolog A (S. cere... 697 7.3e-85 3
UNIPROTKB|Q9NQW1 - symbol:SEC31B "Protein transport prote... 680 1.0e-84 4
UNIPROTKB|Q5R4F4 - symbol:SEC31A "Protein transport prote... 694 3.3e-84 3
RGD|620233 - symbol:Sec31a "SEC31 homolog A (S. cerevisia... 694 5.0e-84 3
UNIPROTKB|F1RVD4 - symbol:SEC31A "Uncharacterized protein... 695 4.1e-83 3
ASPGD|ASPL0000002981 - symbol:AN6257 species:162425 "Emer... 606 1.1e-82 3
UNIPROTKB|A4RD35 - symbol:SEC31 "Protein transport protei... 616 2.0e-82 3
ZFIN|ZDB-GENE-020919-2 - symbol:sec31a "sec31 homolog A (... 704 1.0e-80 3
UNIPROTKB|D6RHZ5 - symbol:SEC31A "Protein transport prote... 694 1.0e-80 3
FB|FBgn0033339 - symbol:sec31 "sec31" species:7227 "Droso... 575 2.1e-78 4
UNIPROTKB|O94979 - symbol:SEC31A "Protein transport prote... 694 5.8e-78 3
UNIPROTKB|D6REX3 - symbol:SEC31A "Protein transport prote... 694 7.9e-78 3
CGD|CAL0000444 - symbol:PGA63 species:5476 "Candida albic... 592 1.6e-77 3
POMBASE|SPBC8D2.20c - symbol:sec31 "COPII-coated vesicle ... 498 1.5e-69 3
SGD|S000002354 - symbol:SEC31 "Component of the Sec13p-Se... 507 2.1e-56 3
GENEDB_PFALCIPARUM|PFB0640c - symbol:PfSec31p "COPII-coat... 464 3.7e-48 3
UNIPROTKB|O96221 - symbol:Sec31p "Sec31p putative" specie... 464 3.7e-48 3
UNIPROTKB|E1BMP2 - symbol:E1BMP2 "Uncharacterized protein... 341 1.5e-41 3
WB|WBGene00011338 - symbol:sec-31 species:6239 "Caenorhab... 318 1.3e-25 3
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 188 4.8e-13 2
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 197 2.0e-12 1
TAIR|locus:2161253 - symbol:MSI1 "MULTICOPY SUPRESSOR OF ... 195 3.3e-12 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 171 7.7e-12 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 170 9.9e-12 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 189 1.4e-11 1
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 195 2.0e-11 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 187 2.4e-11 2
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 178 2.9e-11 2
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 178 2.9e-11 2
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 178 2.9e-11 2
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 186 3.3e-11 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 179 7.8e-11 1
UNIPROTKB|Q5JKX0 - symbol:B1147A04.35 "cDNA clone:J013000... 181 1.8e-10 1
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 178 2.5e-10 1
CGD|CAL0003130 - symbol:orf19.7185 species:5476 "Candida ... 178 3.3e-10 1
UNIPROTKB|Q5A0B0 - symbol:CaO19.7185 "Putative uncharacte... 178 3.3e-10 1
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 176 4.3e-10 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 178 4.6e-10 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 178 5.7e-10 1
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 173 8.9e-10 1
FB|FBgn0046222 - symbol:CG1109 species:7227 "Drosophila m... 177 1.0e-09 1
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 173 1.0e-09 1
DICTYBASE|DDB_G0295793 - symbol:DDB_G0295793 "WD40 repeat... 170 1.1e-09 2
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 171 1.5e-09 1
POMBASE|SPBC1711.07 - symbol:SPBC1711.07 "WD repeat prote... 166 1.8e-09 2
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 170 1.8e-09 1
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 170 1.9e-09 1
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 170 1.9e-09 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 168 2.6e-09 1
UNIPROTKB|H0YCT5 - symbol:RBBP4 "Histone-binding protein ... 147 2.9e-09 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 168 3.1e-09 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 168 3.1e-09 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 168 3.2e-09 1
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 168 3.2e-09 1
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 168 3.2e-09 1
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 168 3.2e-09 1
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 168 3.2e-09 1
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 168 3.2e-09 1
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 168 3.2e-09 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 168 3.2e-09 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 178 3.5e-09 2
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 167 4.1e-09 1
TAIR|locus:2050388 - symbol:AT2G19540 "AT2G19540" species... 158 4.6e-09 3
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 166 5.3e-09 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 166 5.3e-09 1
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 154 5.8e-09 2
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 165 6.5e-09 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 165 6.5e-09 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 165 6.8e-09 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 165 6.8e-09 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 165 6.8e-09 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 165 6.8e-09 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 165 6.8e-09 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 165 6.8e-09 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 165 8.3e-09 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 165 8.3e-09 1
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 163 1.1e-08 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 163 1.1e-08 1
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 151 1.2e-08 2
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 166 1.5e-08 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 162 1.6e-08 1
FB|FBgn0263933 - symbol:ebi "ebi" species:7227 "Drosophil... 165 1.6e-08 1
UNIPROTKB|Q9BQ87 - symbol:TBL1Y "F-box-like/WD repeat-con... 163 1.7e-08 1
UNIPROTKB|E1BV27 - symbol:TBL1X "Uncharacterized protein"... 162 2.2e-08 1
DICTYBASE|DDB_G0275073 - symbol:pwp1 "periodic tryptophan... 162 2.5e-08 1
UNIPROTKB|E1BQV9 - symbol:KATNB1 "Katanin p80 WD40 repeat... 148 2.6e-08 2
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 160 2.9e-08 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 156 3.3e-08 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 127 3.8e-08 2
CGD|CAL0001341 - symbol:orf19.6355 species:5476 "Candida ... 149 4.0e-08 2
UNIPROTKB|Q59PD8 - symbol:RRB1 "Likely nucleolar ribosome... 149 4.0e-08 2
MGI|MGI:1921570 - symbol:Wdr33 "WD repeat domain 33" spec... 125 4.2e-08 2
WARNING: Descriptions of 398 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2087433 [details] [associations]
symbol:AT3G63460 "AT3G63460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016020 "membrane" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006007 "glucose catabolic process" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000230582 KO:K14005
InterPro:IPR009917 Pfam:PF07304 OMA:NQPPPMM EMBL:AY099702
EMBL:BT008435 IPI:IPI00547111 RefSeq:NP_851024.1 UniGene:At.22771
UniGene:At.67091 ProteinModelPortal:Q8L611 SMR:Q8L611 IntAct:Q8L611
STRING:Q8L611 PRIDE:Q8L611 ProMEX:Q8L611 EnsemblPlants:AT3G63460.1
GeneID:825521 KEGG:ath:AT3G63460 TAIR:At3g63460 InParanoid:Q8L611
PhylomeDB:Q8L611 ProtClustDB:CLSN2680494 ArrayExpress:Q8L611
Genevestigator:Q8L611 Uniprot:Q8L611
Length = 1104
Score = 1710 (607.0 bits), Expect = 4.7e-262, Sum P(2) = 4.7e-262
Identities = 312/413 (75%), Positives = 360/413 (87%)
Query: 1 MACIKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
MACIKG+ RSASVA APDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQS+DRDL LVGE
Sbjct: 1 MACIKGVGRSASVALAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSDDRDLPLVGE 60
Query: 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS 120
PSSERFNRLAWG+NGSGSE+F+LGL+AGGLVDG+ID+WNPLSLI S + N L+ HLS
Sbjct: 61 IPSSERFNRLAWGRNGSGSEEFALGLIAGGLVDGNIDLWNPLSLIGS-QPSENALVGHLS 119
Query: 121 RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVS 180
HKGPVRGLEFN+ + NLLASGADDGEICIWDL P+EPSHFP L+G+GSA QGEISF+S
Sbjct: 120 VHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFIS 179
Query: 181 WNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED 240
WN KVQ ILASTSYNGTTV+WDL+KQKP+I+F++S++RRCSVLQWNP+V TQ++VASD+D
Sbjct: 180 WNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDD 239
Query: 241 SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV 300
SSP L+LWDMRN MSPV+EF GH +GVIAM WCP+DSSYLLTCAKDNRTICWDT + EIV
Sbjct: 240 SSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIV 299
Query: 301 SELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKW 360
+ELPAG NWNFD+HWYPKIPGVISASSFDGKIGIYNIEGCSRYGV ++NF APL+APKW
Sbjct: 300 AELPAGNNWNFDVHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVEENNFGTAPLKAPKW 359
Query: 361 YKRPAGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGMVDSSQQY 413
YKRP GASFGFGGKLVS H ++ A TS +H + ++ +V + ++
Sbjct: 360 YKRPVGASFGFGGKLVSCHARAPAKGTSSILSEVFLHSL-VTEQSLVSRTSEF 411
Score = 835 (299.0 bits), Expect = 4.7e-262, Sum P(2) = 4.7e-262
Identities = 182/315 (57%), Positives = 207/315 (65%)
Query: 409 SSQQYYQEPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQA 468
S+ Y QEP Q+ +V Y + YQQP Y++ Y ++ P QP +F+P QA
Sbjct: 800 STMPYNQEPTQA--QPNVLANPYDNQYQQP---YTDSY-YVPQVSHPPMQQPTMFMPHQA 853
Query: 469 T---QPNFTAPAPAPVTSQPAMRP-FIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPV 524
QP+FT PAP +QP+MR F+PSTPP L+NA+QYQQPT+ S + G SN YPV
Sbjct: 854 QPAPQPSFT-PAPTS-NAQPSMRTTFVPSTPPALKNADQYQQPTMSSHSFTGPSNNAYPV 911
Query: 525 PP-VSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVVQRPGMGSMXXXXXXX 583
PP S PSQ+G P PKMP VVAP P GF PM+ GV R +
Sbjct: 912 PPGPGQYAPSGPSQLGQYPNPKMPQVVAPAAGPIGFTPMATPGVAPRSVQPA--SPPTQQ 969
Query: 584 XXXXXXXXXXXXXXXXXXXDTSNVPAHQKPVINTLTRLFNETSEALGGSRANPAKKREIE 643
DTSNVPAHQKPVI TLTRLFNETSEALGG+RAN KKREIE
Sbjct: 970 AAAQAAPAPATPPPTVQTADTSNVPAHQKPVIATLTRLFNETSEALGGARANTTKKREIE 1029
Query: 644 DNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDFGTALQIQVLLTTSDWDECNFWL 703
DNSRK+GALF KLNSGDISKNAADKL QLCQALDNNDF TALQIQVLLTTS+WDECNFWL
Sbjct: 1030 DNSRKLGALFVKLNSGDISKNAADKLAQLCQALDNNDFSTALQIQVLLTTSEWDECNFWL 1089
Query: 704 ATLKRM-IKTRQNVR 717
ATLKRM +K RQNVR
Sbjct: 1090 ATLKRMMVKARQNVR 1104
>TAIR|locus:2034990 [details] [associations]
symbol:AT1G18830 "AT1G18830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 KO:K14005
IPI:IPI00530822 RefSeq:NP_173317.2 UniGene:At.51670
ProteinModelPortal:F4ICD9 SMR:F4ICD9 EnsemblPlants:AT1G18830.1
GeneID:838464 KEGG:ath:AT1G18830 OMA:TELWEST Uniprot:F4ICD9
Length = 969
Score = 1320 (469.7 bits), Expect = 1.2e-190, Sum P(3) = 1.2e-190
Identities = 252/385 (65%), Positives = 302/385 (78%)
Query: 1 MACIKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
M CIK I RSA VA AP++P++AAGTMAGAVDLSFSSSANLEIF+LDFQS DR+L LVG+
Sbjct: 1 MDCIKSIGRSAFVAIAPESPFIAAGTMAGAVDLSFSSSANLEIFELDFQSNDRELKLVGQ 60
Query: 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS 120
SSERFNRLAWG GSGS+ GL+AGGLVDG+I +WNP+S SGE + LS
Sbjct: 61 CQSSERFNRLAWGSYGSGSD----GLIAGGLVDGNIGLWNPISS-ESGEIAH---VRDLS 112
Query: 121 RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVS 180
+HKGPVRGLEFN +PN LASGADDG +CIWDL+ P++PSH+ L+G GS Q EIS +S
Sbjct: 113 KHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLANPSKPSHY--LKGTGSYMQSEISSLS 170
Query: 181 WNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED 240
WN QH+LASTS+NGTTV+WD+ +K + ++ RCSVLQW+PD Q++VASDED
Sbjct: 171 WNKGFQHVLASTSHNGTTVIWDVNNEKIITDLKTTV--RCSVLQWDPDHFNQILVASDED 228
Query: 241 SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV 300
SSP ++L D+R SPV+ FVGH +GVIAM WCP+DS YLLTC KDNRTICW+T +G+IV
Sbjct: 229 SSPNVKLLDIRYLQSPVRTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWNTKTGKIV 288
Query: 301 SELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV-GDSNF-----SAAP 354
+ELP G NWNFD+HWYPK+PGVISASS DGKIGIYN+EGCS YG +F A P
Sbjct: 289 AELPTGQNWNFDVHWYPKMPGVISASSVDGKIGIYNLEGCSSYGTENQQHFLFHLLDADP 348
Query: 355 LRAPKWYKRPAGASFGFGGKLVSFH 379
L APKW+KRPAGASFGFGGKL+SF+
Sbjct: 349 LTAPKWWKRPAGASFGFGGKLISFN 373
Score = 422 (153.6 bits), Expect = 1.2e-190, Sum P(3) = 1.2e-190
Identities = 85/118 (72%), Positives = 99/118 (83%)
Query: 603 DTSNVPAHQKPVINTLTRLFNETSEALGG-SRANPAKKREIEDN-SRKIGALFAKLNSGD 660
DTSNVPAHQKP++ +LTRLF ET E L G SR PAKKRE EDN SRK+GALF+KLN+GD
Sbjct: 852 DTSNVPAHQKPIVASLTRLFKETFEPLRGYSRDTPAKKREAEDNCSRKLGALFSKLNNGD 911
Query: 661 ISKNAADKLVQLCQALDNNDFGTALQIQVLLTTSDWDECNFWLATLKRMIKT-RQNVR 717
ISKNAA+KL QLCQALD DFG AL+IQ L+T+++WDEC+ WL TLK+MI T RQNVR
Sbjct: 912 ISKNAAEKLTQLCQALDKRDFGAALKIQGLMTSTEWDECSSWLPTLKKMIVTGRQNVR 969
Score = 144 (55.7 bits), Expect = 1.2e-190, Sum P(3) = 1.2e-190
Identities = 38/100 (38%), Positives = 52/100 (52%)
Query: 459 QPGLFIPPQATQPNFTAPAPAPVTSQPAMR-PFIPSTPP-VLRNAEQYQQPTLGSQLYPG 516
QP + P Q + +FT PAP +QP+ F P PP L+NA+QYQQPT+ +
Sbjct: 733 QPKISNPYQ--EKSFT-PAPLS-NAQPSRSITFFPLNPPRELKNADQYQQPTMDYHSFNR 788
Query: 517 VSNPGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTP 556
+ P Y PP + S+ SQ+G K+P VAP P
Sbjct: 789 SAGPAYNAPPGPGSYRSIHSQVGPYINSKIPQTVAPPVRP 828
Score = 71 (30.1 bits), Expect = 6.1e-183, Sum P(3) = 6.1e-183
Identities = 25/85 (29%), Positives = 35/85 (41%)
Query: 433 DNYQQPLGPYSNGRGYGASAAYQPAPQPGLF------IPPQATQ--PNFTAPAPAPVTS- 483
D YQQP Y + A AY P PG + + P P AP P+T
Sbjct: 774 DQYQQPTMDY-HSFNRSAGPAYNAPPGPGSYRSIHSQVGPYINSKIPQTVAPPVRPMTPT 832
Query: 484 -QPAMRPFIPSTPPVLRNAEQYQQP 507
Q A++P + PP ++ A+ P
Sbjct: 833 HQVAVQPEPVAPPPTVQTADTSNVP 857
Score = 58 (25.5 bits), Expect = 1.2e-138, Sum P(2) = 1.2e-138
Identities = 34/121 (28%), Positives = 50/121 (41%)
Query: 421 PLHQSVPG-GTYGDNYQQPLGPYSNGRGYGASA--------AYQPAPQPGLFIPPQATQP 471
P + + PG G+Y + Q +GPY N + A +Q A QP PP Q
Sbjct: 792 PAYNAPPGPGSYRSIHSQ-VGPYINSKIPQTVAPPVRPMTPTHQVAVQPEPVAPPPTVQT 850
Query: 472 NFTAPAPA---PV----------TSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVS 518
T+ PA P+ T +P +R + TP R AE LG+ L+ ++
Sbjct: 851 ADTSNVPAHQKPIVASLTRLFKETFEP-LRGYSRDTPAKKREAEDNCSRKLGA-LFSKLN 908
Query: 519 N 519
N
Sbjct: 909 N 909
Score = 49 (22.3 bits), Expect = 1.4e-47, Sum P(3) = 1.4e-47
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 360 WYKRPAG--ASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVD 400
WY + G ++ GK+ ++ + + + +EN QH H +D
Sbjct: 303 WYPKMPGVISASSVDGKIGIYNLEGCSSYGTENQQHFLFHLLD 345
Score = 43 (20.2 bits), Expect = 5.7e-47, Sum P(3) = 5.7e-47
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 83 SLGLVAGGLVDGSIDIWN-PLSLISSGET 110
+L + G VD ++DIW+ L S+G++
Sbjct: 616 TLCYICAGNVDKTVDIWSMSLEKQSAGKS 644
Score = 37 (18.1 bits), Expect = 2.0e-39, Sum P(4) = 2.0e-39
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 133 SFTPNLLASGADDGEICIWDLSAPAE 158
SFTP L++ I + L+ P E
Sbjct: 744 SFTPAPLSNAQPSRSITFFPLNPPRE 769
>UNIPROTKB|Q5F3X8 [details] [associations]
symbol:SEC31A "Protein transport protein Sec31A"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0030134 "ER to Golgi transport vesicle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0012507 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
GO:GO:0030134 EMBL:AJ851522 IPI:IPI00571140 RefSeq:NP_001026312.1
UniGene:Gga.39096 ProteinModelPortal:Q5F3X8 STRING:Q5F3X8
GeneID:422597 KEGG:gga:422597 CTD:22872 eggNOG:NOG248389
HOGENOM:HOG000230582 HOVERGEN:HBG055626 InParanoid:Q5F3X8 KO:K14005
OrthoDB:EOG4WDDB3 NextBio:20825207 Uniprot:Q5F3X8
Length = 1227
Score = 706 (253.6 bits), Expect = 8.3e-93, Sum P(4) = 8.3e-93
Identities = 146/347 (42%), Positives = 222/347 (63%)
Query: 4 IKGINRSASVAFAP--DAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
+K I+R+A A++P P Y+A GT A +D SFS++A+LEIF+LD D+
Sbjct: 3 LKEIDRTAMQAWSPAQQHPIYLATGTSAQQLDASFSTNASLEIFELDLSDPSLDMKSCAT 62
Query: 61 SPSSERFNRLAWGKNG-SGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL 119
S+ R+++L WG + + E S L+AGG +G++ +++P +I+ G+T +IA
Sbjct: 63 FSSAHRYHKLIWGPHSMTAGERVSGVLIAGG-ENGNVILYDPAKIIA-GDT--EVIIAQK 118
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
+H GPVR L+ N F NL+ASGA++ EI IWDL+ A P P G + +IS +
Sbjct: 119 DKHTGPVRALDVNMFQTNLVASGANESEIYIWDLNNFATP--MTP--GAKTQPLEDISCI 174
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVASD 238
+WN +VQHILAS S +G VWDL+K +P+I S+ R CS L W+PDVATQ+V+AS+
Sbjct: 175 AWNRQVQHILASASPSGRATVWDLRKNEPIIKVSDHNNRMHCSGLAWHPDVATQMVLASE 234
Query: 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298
+D P +++WD+R T SP++ HT+G++A++W DS LL+C KD + +C + +GE
Sbjct: 235 DDRLPVIQMWDLRFTSSPLRVLESHTRGILAIAWSMADSELLLSCGKDAKILCSNPNTGE 294
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345
++ ELP W FDI W P+ P ++SA+SFDG++ IY+I G S G+
Sbjct: 295 VLYELPTNMQWCFDIQWCPRNPAILSAASFDGRLRIYSIMGGSTDGL 341
Score = 110 (43.8 bits), Expect = 8.3e-93, Sum P(4) = 8.3e-93
Identities = 31/72 (43%), Positives = 38/72 (52%)
Query: 354 PLRAP-KWYKRPAGASFGFGGKLVSFH---PKSSAGHTSENSQH-APVHGVDQSKYGMVD 408
PL+ P KW +RP GASF FGGKLV+F P+ G + H V V K +
Sbjct: 382 PLKKPPKWIRRPVGASFSFGGKLVTFENAKPQQQPGIDQQPQHHYVYVSQVVTEKEFLAR 441
Query: 409 SSQQYYQEPVQS 420
S+Q QE VQS
Sbjct: 442 STQ--LQEAVQS 451
Score = 105 (42.0 bits), Expect = 8.3e-93, Sum P(4) = 8.3e-93
Identities = 53/175 (30%), Positives = 71/175 (40%)
Query: 415 QEPVQSPLH-QSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAP---QPGLFIPPQATQ 470
QE +++P Q +P G Q GP ++ + Y P P PG I P A
Sbjct: 803 QEAIKAPYERQPMPKDRAGPVAGQVPGPQASAQQYYQQGDKPPPPGFIMPGA-INPSAPP 861
Query: 471 PNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLY-PG--VSNPG---YPV 524
T+P+ + SQ RP P T + +QY T + LY P V+ P YP
Sbjct: 862 QQATSPS-YNMYSQAGTRPAYPQT---YQTTQQYSFGTGETALYQPQQPVAAPASASYPS 917
Query: 525 PPVSDARGSLPSQIGAVPGPKMPNVVAPTPT---PTGFMPMSGSGV-VQ--RPGM 573
P + LP+ VP P P P+PT P P SG Q RPG+
Sbjct: 918 PASNTNPPYLPAA-QPVPSPLYPGQPQPSPTSLNPASSFPPPPSGASFQHGRPGL 971
Score = 84 (34.6 bits), Expect = 6.0e-81, Sum P(3) = 6.0e-81
Identities = 46/171 (26%), Positives = 65/171 (38%)
Query: 380 PKSSAGHTSENSQHAPVHGVDQSKYGMVDSSQ--QYYQEPVQSPLHQSVPGGTYGDNYQQ 437
P++SA + P G G ++ S Q P + Q+ Y YQ
Sbjct: 830 PQASAQQYYQQGDKPPPPGFIMP--GAINPSAPPQQATSPSYNMYSQAGTRPAYPQTYQT 887
Query: 438 PLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAPAPAPV--TSQPAMRPFIPSTP 495
YS G G +A YQP QP + P A+ P+ + P +QP P P P
Sbjct: 888 TQ-QYSFGTG--ETALYQPQ-QP-VAAPASASYPSPASNTNPPYLPAAQPVPSPLYPGQP 942
Query: 496 ---PVLRN-AEQYQQPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQIGAVP 542
P N A + P G+ G PG P V+ A + P+ G +P
Sbjct: 943 QPSPTSLNPASSFPPPPSGASFQHG--RPGLPATSVAYALPTGPT--GTLP 989
Score = 80 (33.2 bits), Expect = 8.3e-93, Sum P(4) = 8.3e-93
Identities = 17/77 (22%), Positives = 44/77 (57%)
Query: 632 SRANPAKKREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDFGTALQIQV-L 690
S ++P KR+++D ++++ L+ KL +S L + ++++ ++ L I + +
Sbjct: 1140 SASDPQTKRKLDDANKRLEFLYDKLREQTLSPAIVSGLHNIVKSIETRNYVEGLNIHMHI 1199
Query: 691 LTTSDWDECNFWLATLK 707
++TS++ E + ++ LK
Sbjct: 1200 VSTSNFSETSAFMPVLK 1216
Score = 43 (20.2 bits), Expect = 8.5e-80, Sum P(3) = 8.5e-80
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 645 NSRKIGALFAKLNSGDISKNAAD---------KLVQLCQALDNNDFGTAL 685
N K+ A ++K+ G+ + D K VQL QA+D N G L
Sbjct: 703 NVEKLVACWSKVQDGNSPLSLQDLIEKVVILRKAVQLTQAVDPNAVGALL 752
Score = 41 (19.5 bits), Expect = 4.1e-86, Sum P(4) = 4.1e-86
Identities = 24/72 (33%), Positives = 28/72 (38%)
Query: 411 QQYYQEPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQ 470
QQ PV +P Q T Q PLGPY A A P +PP +
Sbjct: 1047 QQPPAAPVGTPSFQPQQLST---GQQAPLGPY-------APQALGPC-----VVPPTTFK 1091
Query: 471 PNFTAPAP-APV 481
P T AP AP+
Sbjct: 1092 PR-TEGAPGAPI 1102
Score = 37 (18.1 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 58 VGESPSSERFNRLAWGKNGSGSEDFSLG 85
+GE+P+ L G G +E+ LG
Sbjct: 520 LGEAPTESDVPLLNKGDEGQTAEEHFLG 547
>UNIPROTKB|F1NEB4 [details] [associations]
symbol:SEC31A "Protein transport protein Sec31A"
species:9031 "Gallus gallus" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0030134 "ER to Golgi transport vesicle"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0051592 "response to calcium ion" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005783 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0051592 GO:GO:0030134 IPI:IPI00571140
GeneTree:ENSGT00390000003175 OMA:PSASNAY EMBL:AADN02009035
Ensembl:ENSGALT00000018201 Uniprot:F1NEB4
Length = 1226
Score = 707 (253.9 bits), Expect = 1.7e-92, Sum P(4) = 1.7e-92
Identities = 146/347 (42%), Positives = 222/347 (63%)
Query: 4 IKGINRSASVAFAP--DAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
+K I+R+A A++P P Y+A GT A +D SFS++A+LEIF+LD D+
Sbjct: 3 LKEIDRTAMQAWSPAQQHPIYLATGTSAQQLDASFSTNASLEIFELDLSDPSLDMKSCAT 62
Query: 61 SPSSERFNRLAWGKNG-SGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL 119
S+ R+++L WG + + E S L+AGG +G++ +++P +I+ G+T +IA
Sbjct: 63 FSSAHRYHKLIWGPHSMTAGERVSGVLIAGG-ENGNVLLYDPAKIIA-GDT--EVIIAQK 118
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
+H GPVR L+ N F NL+ASGA++ EI IWDL+ A P P G + +IS +
Sbjct: 119 DKHTGPVRALDVNMFQTNLVASGANESEIYIWDLNNFATP--MTP--GAKTQPLEDISCI 174
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVASD 238
+WN +VQHILAS S +G VWDL+K +P+I S+ R CS L W+PDVATQ+V+AS+
Sbjct: 175 AWNRQVQHILASASPSGRATVWDLRKNEPIIKVSDHNNRMHCSGLAWHPDVATQMVLASE 234
Query: 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298
+D P +++WD+R T SP++ HT+G++A++W DS LL+C KD + +C + +GE
Sbjct: 235 DDRLPVIQMWDLRFTSSPLRVLESHTRGILAIAWSMADSELLLSCGKDAKILCSNPNTGE 294
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345
++ ELP W FDI W P+ P ++SA+SFDG++ IY+I G S G+
Sbjct: 295 VLYELPTNMQWCFDIQWCPRNPAILSAASFDGRLSIYSIMGGSTDGL 341
Score = 110 (43.8 bits), Expect = 1.7e-92, Sum P(4) = 1.7e-92
Identities = 31/72 (43%), Positives = 38/72 (52%)
Query: 354 PLRAP-KWYKRPAGASFGFGGKLVSFH---PKSSAGHTSENSQH-APVHGVDQSKYGMVD 408
PL+ P KW +RP GASF FGGKLV+F P+ G + H V V K +
Sbjct: 382 PLKKPPKWIRRPVGASFSFGGKLVTFENAKPQQQPGIDQQPQHHYVYVSQVVTEKEFLAR 441
Query: 409 SSQQYYQEPVQS 420
S+Q QE VQS
Sbjct: 442 STQ--LQEAVQS 451
Score = 107 (42.7 bits), Expect = 1.7e-92, Sum P(4) = 1.7e-92
Identities = 53/175 (30%), Positives = 72/175 (41%)
Query: 415 QEPVQSPLH-QSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAP---QPGLFIPPQATQ 470
QE +++P Q +P G Q GP ++ + Y P P PG I P A
Sbjct: 803 QEAIKAPYERQPMPKDRAGPVAGQVPGPQASAQQYYQQGDKPPPPGFIMPGA-INPSAPP 861
Query: 471 PNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLY-PG--VSNPG---YPV 524
T+P+ + + SQ RP P T +QY T + LY P V+ P YP
Sbjct: 862 QQATSPSYS-MYSQAGTRPAYPQT----YQTQQYSFGTGETALYQPQQPVAAPASASYPS 916
Query: 525 PPVSDARGSLPSQIGAVPGPKMPNVVAPTPT---PTGFMPMSGSGV-VQ--RPGM 573
P + LP+ VP P P P+PT P P+ SG Q RPG+
Sbjct: 917 PASNTNPPYLPAA-QPVPSPLYPGQPQPSPTSLNPASSFPLPPSGASFQHGRPGL 970
Score = 86 (35.3 bits), Expect = 1.2e-80, Sum P(3) = 1.2e-80
Identities = 47/171 (27%), Positives = 65/171 (38%)
Query: 380 PKSSAGHTSENSQHAPVHGVDQSKYGMVDSSQ--QYYQEPVQSPLHQSVPGGTYGDNYQQ 437
P++SA + P G G ++ S Q P S Q+ Y YQ
Sbjct: 830 PQASAQQYYQQGDKPPPPGFIMP--GAINPSAPPQQATSPSYSMYSQAGTRPAYPQTYQT 887
Query: 438 PLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAPAPAPV--TSQPAMRPFIPSTP 495
YS G G +A YQP QP + P A+ P+ + P +QP P P P
Sbjct: 888 Q--QYSFGTG--ETALYQPQ-QP-VAAPASASYPSPASNTNPPYLPAAQPVPSPLYPGQP 941
Query: 496 ---PVLRN-AEQYQQPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQIGAVP 542
P N A + P G+ G PG P V+ A + P+ G +P
Sbjct: 942 QPSPTSLNPASSFPLPPSGASFQHG--RPGLPATSVAYALPTGPT--GTLP 988
Score = 74 (31.1 bits), Expect = 1.7e-92, Sum P(4) = 1.7e-92
Identities = 16/77 (20%), Positives = 43/77 (55%)
Query: 632 SRANPAKKREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDFGTALQIQV-L 690
S ++P KR+++D ++++ L+ KL +S L + ++++ ++ L I + +
Sbjct: 1139 SASDPQTKRKLDDANKRLEFLYDKLREQTLSPAIVSGLHNIVKSIETRNYVEGLNIHMHI 1198
Query: 691 LTTSDWDECNFWLATLK 707
++ S++ E + ++ LK
Sbjct: 1199 VSKSNFSETSAFMPVLK 1215
Score = 43 (20.2 bits), Expect = 6.5e-80, Sum P(3) = 6.5e-80
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 645 NSRKIGALFAKLNSGDISKNAAD---------KLVQLCQALDNNDFGTAL 685
N K+ A ++K+ G+ + D K VQL QA+D N G L
Sbjct: 703 NVEKLVACWSKVQDGNSPLSLQDLIEKVVILRKAVQLTQAVDPNAVGALL 752
Score = 40 (19.1 bits), Expect = 1.7e-85, Sum P(4) = 1.7e-85
Identities = 22/73 (30%), Positives = 28/73 (38%)
Query: 411 QQYYQEPVQSPLHQ-SVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQAT 469
Q Q+P +P+ S Q PLGPY A A P +PP
Sbjct: 1042 QAQMQQPPAAPVGTPSFQPQQLSAGQQAPLGPY-------APQALGPC-----VVPPTTF 1089
Query: 470 QPNFTAPAP-APV 481
+P T AP AP+
Sbjct: 1090 KPR-TEGAPGAPI 1101
>DICTYBASE|DDB_G0270992 [details] [associations]
symbol:sec31 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030127 "COPII
vesicle coat" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=ISS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004098
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02840 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0270992 GO:GO:0006886
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0005681 GO:GO:0006888
GO:GO:0030127 eggNOG:NOG248389 KO:K14005 RefSeq:XP_646396.1
ProteinModelPortal:Q55CT5 STRING:Q55CT5 PRIDE:Q55CT5
EnsemblProtists:DDB0235185 GeneID:8617351 KEGG:ddi:DDB_G0270992
OMA:MMNQPPM Uniprot:Q55CT5
Length = 1355
Score = 689 (247.6 bits), Expect = 6.1e-90, Sum P(4) = 6.1e-90
Identities = 133/314 (42%), Positives = 200/314 (63%)
Query: 1 MACIKGINRSASVAFAPDA--P-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLL 57
M+ +K I+R ++ +++P A P YMA GT+ G + F +S+ LEI+ LD +E + + L
Sbjct: 1 MSKLKEISRQSTTSWSPIAQYPDYMAVGTVTGTIGADFDTSSKLEIYSLDITNESKQMTL 60
Query: 58 VGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGG----- 112
G + SS RFN++ WG+ S +F G++AG + +G+I++W+P +++S T G
Sbjct: 61 KGSTSSSTRFNKVVWGQ---ASSNFQNGIIAGAMDNGTINLWDPTKILASDATDGGGSDD 117
Query: 113 -NPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSA 171
+ LI RH GPV+ ++FN PNLLASG D E+ IWDLS P +PS P G+ S
Sbjct: 118 QSSLIGVGQRHSGPVQSIDFNVQNPNLLASGGSDSEVFIWDLSDPTQPSALNP--GSKSQ 175
Query: 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSV--LQWNPDV 229
+I+ V+WN KV HIL S SYNG V+WDLK +K +++ ++ R+C + W+P
Sbjct: 176 QSSDITCVAWNKKVAHILGSASYNGYIVIWDLKSKKTLMTINDR-NRKCKYRSIVWHPSE 234
Query: 230 ATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRT 289
ATQ+V AS++D P ++ WD+RNT SPVK GH KGV +SWCP+D++ LL+ KDN+T
Sbjct: 235 ATQIVAASEDDDHPVIQAWDLRNTTSPVKSMEGHKKGVWGLSWCPSDNALLLSTGKDNKT 294
Query: 290 ICWDTVSGEIVSEL 303
CW+ EI+ E+
Sbjct: 295 FCWNFDRQEILCEI 308
Score = 149 (57.5 bits), Expect = 6.1e-90, Sum P(4) = 6.1e-90
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 309 WNFDIHWYPKIPGVISASSFDGKIGIYNIE--------GCSR-----YGVGDSNFSAAPL 355
WNF++ W P++P ++S SS+ GK+ +Y+++ G S G+ + P
Sbjct: 338 WNFEVQWSPRVPALLSTSSYVGKVNVYSLQDVNEKSTSGSSAGQLNALGIQEQTSQITPT 397
Query: 356 --RAPKWYKRPAGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGMVDSSQQY 413
P W RP GA+FGFGGK+ F ++ + N +P S V SQ
Sbjct: 398 IKHTPNWLLRPCGAAFGFGGKIAVFG-RNKKVTAAANGATSP--SSSSSPASSVQQSQLQ 454
Query: 414 YQEPV 418
Q+ V
Sbjct: 455 QQQRV 459
Score = 82 (33.9 bits), Expect = 6.1e-90, Sum P(4) = 6.1e-90
Identities = 43/187 (22%), Positives = 67/187 (35%)
Query: 392 QHAPVHGVDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGTYGDNYQQPL----GPYSNGRG 447
QH P Q + Q + +P Q P+ Q Q P+ P N
Sbjct: 938 QHQPPQQQQQQQQQQQMGRQNTFNQPPQ-PMGQH-QHQQQQQQQQPPIMMNQSPMQNNNN 995
Query: 448 YGASAAYQPAP--QPGLFI-PPQATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQY 504
QP QP + PP QP P + +QP + + PP + N Q
Sbjct: 996 NRIPMMNQPPMMNQPPMMNQPPMMNQPPQMMNQPPQMMNQPPPQ-MMNQPPPQMMNNNQ- 1053
Query: 505 QQPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSG 564
P + + P +P P P +++ + P + + GP N P P +PM+G
Sbjct: 1054 -PPIMMRPMQPSGPSPMNPPPTMNNTQP--PPMMNTMGGPSSVNNSQP-P----IIPMNG 1105
Query: 565 SGVVQRP 571
+ + P
Sbjct: 1106 NPLPMNP 1112
Score = 75 (31.5 bits), Expect = 1.2e-75, Sum P(3) = 1.2e-75
Identities = 47/175 (26%), Positives = 64/175 (36%)
Query: 387 TSENSQHAPVHGVDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGTYGDNYQQP-LGPYSNG 445
T N+Q P+ V++SQ +PL + D QP + P N
Sbjct: 1074 TMNNTQPPPMMNT-MGGPSSVNNSQPPIIPMNGNPLPMNPMSPMMSDKSNQPPMNPMMNP 1132
Query: 446 RG--YGASAAYQP-APQPGLFIPPQATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAE 502
QP AP P + PQ P P P P+ P + STPP+
Sbjct: 1133 MNPMNPMMNPIQPTAPPPMNPMIPQGGSPMINHPPP-PMN--PMINNGPVSTPPM----- 1184
Query: 503 QYQQPTLGSQLYPGVSNPGYPV-PPVSDARGSLPSQIGAV-PGPKMPNVVAPTPT 555
P + + +S P P PV + + S PS P PK PNV TP+
Sbjct: 1185 ---NPMMNQVVPQNISPPQMPTRSPVLENKSSSPSSESFTSPAPK-PNVHNKTPS 1235
Score = 68 (29.0 bits), Expect = 1.8e-88, Sum P(4) = 1.8e-88
Identities = 43/176 (24%), Positives = 72/176 (40%)
Query: 395 PVHGVDQSKYGMVDSSQQ-YYQEPVQ----SPLHQSVPGGTYGDNYQQPLGPYSNGRGYG 449
P ++Q M++++Q P+Q SP++ P T +N Q P P N G G
Sbjct: 1037 PPQMMNQPPPQMMNNNQPPIMMRPMQPSGPSPMN---PPPTM-NNTQPP--PMMNTMG-G 1089
Query: 450 ASAAY--QPA--PQPGLFIPPQATQPNFTAPAPAPVTSQPAMRPFIPSTP---PVLRNAE 502
S+ QP P G +P P + + P + P M P P P P+ A
Sbjct: 1090 PSSVNNSQPPIIPMNGNPLPMNPMSPMMSDKSNQPPMN-PMMNPMNPMNPMMNPIQPTAP 1148
Query: 503 QYQQPTLGSQLYPGVSNPGYPVPP-VSDARGSLPSQIGAVPGPKMPNVVAPTPTPT 557
P + P +++P P+ P +++ S P + + +P ++P PT
Sbjct: 1149 PPMNPMIPQGGSPMINHPPPPMNPMINNGPVSTPP-MNPMMNQVVPQNISPPQMPT 1203
Score = 61 (26.5 bits), Expect = 6.1e-90, Sum P(4) = 6.1e-90
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 643 EDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDFGTALQIQVLLTTSD-WDECNF 701
ED +++ L K++ DIS A L + ++ DF A + +T++ W E
Sbjct: 1279 EDANKRCQGLINKVSKKDISAEAFKALDAILASIVEKDFKKASDTYIQITSTPLWGEVGS 1338
Query: 702 W-LATLKRMI 710
+ LKR+I
Sbjct: 1339 QSMVGLKRLI 1348
Score = 57 (25.1 bits), Expect = 1.8e-12, Sum P(4) = 1.8e-12
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 138 LLASGADDGEICI--WDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195
++A+ DD I WDL P + G+ G +SW +L ST +
Sbjct: 238 IVAASEDDDHPVIQAWDLRNTTSP--VKSMEGHKKGVWG----LSWCPSDNALLLSTGKD 291
Query: 196 GTTVVWDLKKQKPVISFSESIKR 218
T W+ +Q+ + +++ R
Sbjct: 292 NKTFCWNFDRQEILCEINDNNSR 314
>MGI|MGI:2685187 [details] [associations]
symbol:Sec31b "Sec31 homolog B (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0044432 "endoplasmic reticulum part" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2685187 GO:GO:0012507 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789
GO:GO:0015031 eggNOG:NOG248389 HOGENOM:HOG000230582
HOVERGEN:HBG055626 KO:K14005 GeneTree:ENSGT00390000003175 CTD:25956
OMA:RLECLYE OrthoDB:EOG470TGM EMBL:AK158017 EMBL:AC151478
EMBL:BC042701 IPI:IPI00667569 IPI:IPI00854010 RefSeq:NP_001028515.1
UniGene:Mm.329873 ProteinModelPortal:Q3TZ89 SMR:Q3TZ89
PhosphoSite:Q3TZ89 PaxDb:Q3TZ89 PRIDE:Q3TZ89
Ensembl:ENSMUST00000063632 Ensembl:ENSMUST00000111985 GeneID:240667
KEGG:mmu:240667 UCSC:uc008hpu.1 UCSC:uc012bmg.1 InParanoid:Q3TZ89
NextBio:384667 Bgee:Q3TZ89 CleanEx:MM_SEC31B Genevestigator:Q3TZ89
Uniprot:Q3TZ89
Length = 1158
Score = 776 (278.2 bits), Expect = 7.2e-89, Sum P(3) = 7.2e-89
Identities = 171/391 (43%), Positives = 240/391 (61%)
Query: 4 IKGINRSASVAFAP--DAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
+K + + A A++P P Y+A GT A +D SFS++A LEIF++DF+ DL G
Sbjct: 3 LKELEKPAVQAWSPARQYPVYLATGTSAQQLDASFSTNATLEIFEIDFRDPSLDLKHKGI 62
Query: 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS 120
S RF++L WG GSG + S G++AGG +G++ ++N ++SSG+ PLIA
Sbjct: 63 LSVSSRFHKLIWGSFGSGLLENS-GVIAGGGDNGTLTLYNVTHVLSSGK---EPLIAQKQ 118
Query: 121 RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVS 180
+H G VR L+FN F NLLASGA D EI IWDL+ + P P N +I +S
Sbjct: 119 KHTGAVRALDFNPFQGNLLASGASDSEIFIWDLNHLSVPMTPGPKSQNPPE---DIKALS 175
Query: 181 WNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-SIKRRCSVLQWNPDVATQLVVASDE 239
WN +VQHILAS +G VVWDL+K +P+I S S + CS L WNPD+ATQLV+ S++
Sbjct: 176 WNLQVQHILASAHPSGKAVVWDLRKNEPIIKVSSHSSRMNCSGLAWNPDIATQLVLCSED 235
Query: 240 DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI 299
D P ++LWD+R SP+K H++G+++MSW D+ LL+ AKD++ CW+ S E+
Sbjct: 236 DQLPVIQLWDLRFASSPLKVLESHSRGILSMSWNQADAELLLSTAKDSQIFCWNLSSSEV 295
Query: 300 VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS------RYG--VGDSNFS 351
V +LP ++W FD+ W P+ P V SA SFDG I + ++ G S R V +
Sbjct: 296 VYKLPTQSSWCFDVQWCPQSPPVFSAVSFDGWISLCSVMGRSWEAQHMRQADKVPEQVAQ 355
Query: 352 AA---PLRAP-KWYKRPAGASFGFGGKLVSF 378
A+ PL+ P KW +RPAG SF FGGKLV+F
Sbjct: 356 ASLIPPLKKPPKWMRRPAGGSFAFGGKLVTF 386
Score = 84 (34.6 bits), Expect = 7.2e-89, Sum P(3) = 7.2e-89
Identities = 48/172 (27%), Positives = 67/172 (38%)
Query: 394 APVHGVDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAA 453
A +H + S Y ++ Q P Q P P T + P P G+S
Sbjct: 790 AALHSKETSSY------RRGLQPPQQVPAPSVRPRTTAQPSSVMPFSPSQPSPSQGSSDH 843
Query: 454 YQPAPQ---PGLFIPPQATQPNFTAPAPAPVTSQPAMRP--F-----IPSTPPVLRNAEQ 503
PQ PG F+P +P + P + S PA+ P F +P PV+ + +
Sbjct: 844 RVLRPQAILPGHFVP--GVRPALSPPQLSGGQSVPAVNPAGFCGAWPLPGPTPVMASPD- 900
Query: 504 YQQPTLGSQLYPGVSNPGYPVPPVSD-ARGSLPSQIGAVPGPKMPNVVAPTP 554
+ QP GS P P+PPV L SQ+ A P + VAP P
Sbjct: 901 FMQP--GSTHLPETPRL-LPLPPVGPPGPNPLSSQLPASP---VTFSVAPPP 946
Score = 74 (31.1 bits), Expect = 7.2e-89, Sum P(3) = 7.2e-89
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 639 KREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDF--GTALQIQVLLTTSDW 696
KR++E+ +R++ L+ KL G +S + L ++ + +D F G A+ QV S +
Sbjct: 1078 KRKLEEAARRLECLYEKLCEGTLSPHVLAGLHEVARCVDAGSFEQGLAVHAQVA-GCSSF 1136
Query: 697 DECNFWLATLKRMI 710
E + ++ LK ++
Sbjct: 1137 SEVSSFMPMLKAVL 1150
Score = 71 (30.1 bits), Expect = 1.7e-87, Sum P(3) = 1.7e-87
Identities = 38/136 (27%), Positives = 51/136 (37%)
Query: 424 QSVPGGTYGDNYQQPLGP--YSNGRGYGA--SAAYQPA-PQPGLFIPPQATQPNFTAPAP 478
Q++ G + + L P S G+ A A + A P PG P P+F P
Sbjct: 849 QAILPGHFVPGVRPALSPPQLSGGQSVPAVNPAGFCGAWPLPGP--TPVMASPDFMQPGS 906
Query: 479 APVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQ- 537
+ P + P P PP N Q P + PG P P S A LPS
Sbjct: 907 THLPETPRLLPLPPVGPPG-PNPLSSQLPA-SPVTFSVAPPPGGPRAPCSSA---LPSSG 961
Query: 538 -IGAVPGPKMPNVVAP 552
+ PGP+ V+P
Sbjct: 962 ILATCPGPQDSWKVSP 977
Score = 37 (18.1 bits), Expect = 6.2e-84, Sum P(3) = 6.2e-84
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 456 PAPQPGLFIPPQATQPNFTAPAP-AP-VTSQPAMRPFIP 492
P PQ L PQ + T P P AP S ++P P
Sbjct: 1007 PEPQQALL--PQPLVSSATLPPPGAPRECSLQQLQPLPP 1043
>RGD|1598329 [details] [associations]
symbol:Sec31b "SEC31 homolog B (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0044432 "endoplasmic reticulum part"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1598329 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 KO:K14005
GeneTree:ENSGT00390000003175 CTD:25956 OrthoDB:EOG470TGM
EMBL:AC103018 IPI:IPI00554203 RefSeq:NP_001129185.1
UniGene:Rn.45161 ProteinModelPortal:D4ADQ9
Ensembl:ENSRNOT00000035758 GeneID:309433 KEGG:rno:309433
UCSC:RGD:1598329 NextBio:660758 Uniprot:D4ADQ9
Length = 1179
Score = 710 (255.0 bits), Expect = 7.6e-88, Sum P(4) = 7.6e-88
Identities = 148/345 (42%), Positives = 214/345 (62%)
Query: 4 IKGINRSASVAFAP--DAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
+K + + A A++P P Y+A GT A +D SFS++A LEIF++DF+ DL G
Sbjct: 3 LKELEKPAVQAWSPAKQYPVYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDLKRKGI 62
Query: 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS 120
S RF++L WG + SG + + G++AGG G + ++N ++S G+ PLIA
Sbjct: 63 LSVSSRFHKLIWGSSSSGLLE-NTGVIAGGGDSGMLTLYNVTHILSPGK---EPLIAQKQ 118
Query: 121 RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQG---EIS 177
+H G VR L+FN F NLLASGA D EI IWDL+ P P GS +Q +I
Sbjct: 119 KHTGAVRALDFNPFQGNLLASGASDSEIFIWDLNHLTVP--MTP----GSKSQNPPEDIK 172
Query: 178 FVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-SIKRRCSVLQWNPDVATQLVVA 236
+SWN +VQHIL+S +G VVWDL+K +P+I S+ S + CS L WNPD+ATQLV+
Sbjct: 173 ALSWNRQVQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSSRMNCSGLAWNPDIATQLVLC 232
Query: 237 SDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296
S++D P ++LWD+R SP+K H++G++++SW D+ LL+ AKDN+ CW+ S
Sbjct: 233 SEDDRLPVIQLWDLRFASSPLKVLESHSRGILSVSWSQADAELLLSSAKDNQIFCWNLSS 292
Query: 297 GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341
E+V +LP ++W FD+ W P+ P SA SFDG I +Y++ G S
Sbjct: 293 SEVVYKLPTQSSWCFDVQWCPRNPPAFSAVSFDGWISLYSVMGRS 337
Score = 97 (39.2 bits), Expect = 7.6e-88, Sum P(4) = 7.6e-88
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 354 PLRAP-KWYKRPAGASFGFGGKLVSF 378
PL+ P KW +RPAG SF FGGKLV+F
Sbjct: 377 PLKKPPKWMRRPAGVSFAFGGKLVTF 402
Score = 72 (30.4 bits), Expect = 7.6e-88, Sum P(4) = 7.6e-88
Identities = 18/74 (24%), Positives = 41/74 (55%)
Query: 639 KREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDF--GTALQIQVLLTTSDW 696
KR++++ + ++ L+ KL G +S + L ++ + +D F G A+ QV+ + S +
Sbjct: 1099 KRKLDEAAHRLECLYEKLCEGTLSPHVLAGLHEVARCVDAGSFEQGLAVHAQVV-SCSSF 1157
Query: 697 DECNFWLATLKRMI 710
E + ++ LK ++
Sbjct: 1158 SEVSSFMPVLKAVL 1171
Score = 71 (30.1 bits), Expect = 7.6e-88, Sum P(4) = 7.6e-88
Identities = 41/140 (29%), Positives = 54/140 (38%)
Query: 416 EPVQSPLHQSV---PGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPN 472
+P SP+ SV PGG P P S+ A +P PQ + P A+Q N
Sbjct: 952 QPAASPVTFSVAHPPGG--------PGAPRSSALPSSGILATRPGPQDTWKVAP-ASQEN 1002
Query: 473 FTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDARG 532
P T P P I T P++ + QQ L L G S P PP +
Sbjct: 1003 LQRKK-LPETFMPPA-PII--TAPLMSLGPEPQQALLPQSLVSGASLP----PPGAPREC 1054
Query: 533 SLPSQIGAVPGPKMPNVVAP 552
SL Q+ +P K + P
Sbjct: 1055 SL-QQLQPLPPEKTQKELPP 1073
Score = 64 (27.6 bits), Expect = 4.1e-87, Sum P(4) = 4.1e-87
Identities = 33/112 (29%), Positives = 49/112 (43%)
Query: 470 QPNFTAPAPA--P-VTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQL-YPGVSNPGYPVP 525
QP PAP+ P +QP++ PF+PS P + + + Q + ++ P + P + VP
Sbjct: 821 QPPRQVPAPSVRPRAAAQPSVMPFLPSHP--IPSVGSWTQSSSDYRVPKPQATLPVHFVP 878
Query: 526 PVSDARGSLPSQIGAVPGPKMPNVVA-----PTPTPTGFMPMSGSGVVQRPG 572
V A S P G + N V P P PT P+ V +PG
Sbjct: 879 GVRPAF-SQPQPFGG-QSVQAINPVGFCGTWPLPGPT---PVMAPPDVMQPG 925
Score = 60 (26.2 bits), Expect = 1.1e-86, Sum P(4) = 1.1e-86
Identities = 36/121 (29%), Positives = 45/121 (37%)
Query: 464 IP-PQATQPNFTAPAPAPVTSQPAMRPF----IPSTPPV-LRNAEQYQQPTLGSQLYPGV 517
+P PQAT P P P SQP +PF + + PV PT P V
Sbjct: 865 VPKPQATLPVHFVPGVRPAFSQP--QPFGGQSVQAINPVGFCGTWPLPGPT-PVMAPPDV 921
Query: 518 SNPGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFM---PMSGSGVVQRPGMG 574
PG P + LP +G PGP P P +P F P G G + +
Sbjct: 922 MQPGSTHLPETPRLLPLPP-VGP-PGPT-PLSSQPAASPVTFSVAHPPGGPGAPRSSALP 978
Query: 575 S 575
S
Sbjct: 979 S 979
Score = 56 (24.8 bits), Expect = 2.8e-86, Sum P(4) = 2.8e-86
Identities = 31/105 (29%), Positives = 41/105 (39%)
Query: 459 QPGLFIPPQATQ----PNFTAPAPAPVTSQPAMRP--FIPSTPPVLRNAEQYQQ-PTLGS 511
QPG P+ + P P P P++SQPA P F + PP A + P+ G
Sbjct: 923 QPGSTHLPETPRLLPLPPVGPPGPTPLSSQPAASPVTFSVAHPPGGPGAPRSSALPSSGI 982
Query: 512 -QLYPGVSNPGYPVPPVSDA---RGSLPSQIGAVPGPKMPNVVAP 552
PG + + V P S R LP P P + AP
Sbjct: 983 LATRPGPQDT-WKVAPASQENLQRKKLPETFM----PPAPIITAP 1022
Score = 43 (20.2 bits), Expect = 1.8e-81, Sum P(4) = 1.8e-81
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 450 ASAAYQPAPQPGLFIPPQATQPNFTAPAPAP 480
+S+ Q P P L +P Q Q + P P
Sbjct: 351 SSSFSQGQPLPPLQVPEQVAQASLIPPLKKP 381
>UNIPROTKB|B7ZL00 [details] [associations]
symbol:SEC31A "Protein transport protein Sec31A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043231 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:AC021105 HOGENOM:HOG000230582
HOVERGEN:HBG055626 EMBL:AC108469 UniGene:Hs.370024 HGNC:HGNC:17052
ChiTaRS:SEC31A EMBL:BC143492 IPI:IPI00965360 SMR:B7ZL00
STRING:B7ZL00 Ensembl:ENST00000505984 UCSC:uc011ccl.2
Uniprot:B7ZL00
Length = 1166
Score = 694 (249.4 bits), Expect = 2.2e-87, Sum P(3) = 2.2e-87
Identities = 144/347 (41%), Positives = 219/347 (63%)
Query: 4 IKGINRSASVAFAP--DAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
+K ++R+A A++P + P Y+A GT A +D +FS++A+LEIF+LD D+
Sbjct: 3 LKEVDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTNASLEIFELDLSDPSLDMKSCAT 62
Query: 61 SPSSERFNRLAWGKNGSGSE-DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL 119
SS R+++L WG S+ D S L+AGG +G+I +++P +I+ + +IA
Sbjct: 63 FSSSHRYHKLIWGPYKMDSKGDVSGVLIAGG-ENGNIILYDPSKIIAGDK---EVVIAQN 118
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
+H GPVR L+ N F NL+ASGA++ EI IWDL+ A P P G + +IS +
Sbjct: 119 DKHTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFATP--MTP--GAKTQPPEDISCI 174
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVASD 238
+WN +VQHILAS S +G VWDL+K +P+I S+ R CS L W+PDVATQ+V+AS+
Sbjct: 175 AWNRQVQHILASASPSGRATVWDLRKNEPIIKVSDHSNRMHCSGLAWHPDVATQMVLASE 234
Query: 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298
+D P +++WD+R SP++ H +G++A++W D LL+C KD + +C + +GE
Sbjct: 235 DDRLPVIQMWDLRFASSPLRVLENHARGILAIAWSMADPELLLSCGKDAKILCSNPNTGE 294
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345
++ ELP T W FDI W P+ P V+SA+SFDG+I +Y+I G S G+
Sbjct: 295 VLYELPTNTQWCFDIQWCPRNPAVLSAASFDGRISVYSIMGGSTDGL 341
Score = 128 (50.1 bits), Expect = 2.2e-87, Sum P(3) = 2.2e-87
Identities = 70/340 (20%), Positives = 125/340 (36%)
Query: 392 QHAPVHGVDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGAS 451
Q P +G S+ Q+PV P + P Y + G + Y A
Sbjct: 834 QPQPYQPAQPYPFGTGGSAMYRPQQPVAPPTSNAYPNTPYISSASSYTG---QSQLYAAQ 890
Query: 452 -AAYQPAPQPGL-FIPPQATQPNFT--APAPAPVTSQPAMRPFI--PST----PPVLRNA 501
A P P F PP ++ +F P P +S A+ P P PP L
Sbjct: 891 HQASSPTSSPATSFPPPPSSGASFQHGGPGAPPSSSAYALPPGTTGPQNGWNDPPALNRV 950
Query: 502 EQYQQPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMP 561
+ ++ + P V + P+ D + + Q + P P P P G P
Sbjct: 951 PKKKK--MPENFMPPVPITSPIMNPLGDPQSQMLQQQPSAPVPLSSQSSFPQPHLPGGQP 1008
Query: 562 MSGSGVVQRP-GMGSMXXXXXXXXXXXXXXX-XXXXXXXXXXXDTSNVPAHQKPVINT-- 617
G VQ+P G M T + +KP+ +
Sbjct: 1009 FHG---VQQPLGQTGMPPSFSKPNIEGAPGAPIGNTFQHVQSLPTKKIT--KKPIPDEHL 1063
Query: 618 -LTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQAL 676
L F + + S +P KR+++D S+++ L+ KL +S L + +++
Sbjct: 1064 ILKTTFEDLIQRCLSSATDPQTKRKLDDASKRLEFLYDKLREQTLSPTITSGLHNIARSI 1123
Query: 677 DNNDFGTALQIQV-LLTTSDWDECNFWLATLKRMIKTRQN 715
+ ++ L + +++TS++ E + ++ LK ++ T+ N
Sbjct: 1124 ETRNYSEGLTMHTHIVSTSNFSETSAFMPVLK-VVLTQAN 1162
Score = 107 (42.7 bits), Expect = 2.2e-87, Sum P(3) = 2.2e-87
Identities = 28/72 (38%), Positives = 35/72 (48%)
Query: 354 PLRAP-KWYKRPAGASFGFGGKLVSFH----PKSSAGHTSENSQHAPVHGVDQSKYGMVD 408
PL+ P KW +RP GASF FGGKLV+F P + H + V K +
Sbjct: 382 PLKKPPKWIRRPVGASFSFGGKLVTFENVRMPSHQGAEQQQQQHHVFISQVVTEKEFLSR 441
Query: 409 SSQQYYQEPVQS 420
S Q Q+ VQS
Sbjct: 442 SDQ--LQQAVQS 451
Score = 69 (29.3 bits), Expect = 4.3e-72, Sum P(2) = 4.3e-72
Identities = 46/185 (24%), Positives = 68/185 (36%)
Query: 316 YPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKL 375
YP P + SASS+ G+ +Y +++ S A P +GASF GG
Sbjct: 868 YPNTPYISSASSYTGQSQLY----AAQHQASSPTSSPATSFPPP---PSSGASFQHGGPG 920
Query: 376 VSFHPKSSAGHTSENSQHAPVHGV-DQSKYGMVDSSQQYYQE-----PVQSPLHQSVPGG 429
P SS+ + P +G D V ++ + P+ SP+ + G
Sbjct: 921 A---PPSSSAYALPPGTTGPQNGWNDPPALNRVPKKKKMPENFMPPVPITSPIMNPL-GD 976
Query: 430 TYGDNYQQ------PLG-------PYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAP 476
QQ PL P+ G G QP Q G+ PP ++PN
Sbjct: 977 PQSQMLQQQPSAPVPLSSQSSFPQPHLPG-GQPFHGVQQPLGQTGM--PPSFSKPNIEGA 1033
Query: 477 APAPV 481
AP+
Sbjct: 1034 PGAPI 1038
Score = 41 (19.5 bits), Expect = 3.0e-78, Sum P(3) = 3.0e-78
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 668 KLVQLCQALDNNDFGTAL 685
K VQL QA+D + G L
Sbjct: 690 KAVQLTQAMDTSTVGVLL 707
Score = 40 (19.1 bits), Expect = 3.9e-78, Sum P(3) = 3.9e-78
Identities = 22/73 (30%), Positives = 29/73 (39%)
Query: 501 AEQYQQPTLGSQ-LYPGVSNPGYP-------VPPVSDARGSLPS-------QIGAVPGPK 545
A +Q P + +Q YP NP P V P +A G LP+ Q+ P P+
Sbjct: 779 AGHHQMPRVQTQQYYPHGENPPPPGFIMHGNVNP--NAAGQLPTSPGHMHTQVPPYPQPQ 836
Query: 546 MPNVVAPTPTPTG 558
P P TG
Sbjct: 837 PYQPAQPYPFGTG 849
Score = 40 (19.1 bits), Expect = 3.2e-71, Sum P(3) = 3.2e-71
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 458 PQPGLFIPPQATQPNFTAPAPAP 480
P P L IP Q Q + P P
Sbjct: 364 PLPPLQIPQQTAQHSIVLPLKKP 386
>MGI|MGI:1916412 [details] [associations]
symbol:Sec31a "Sec31 homolog A (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005768 "endosome" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030134 "ER to Golgi transport vesicle"
evidence=ISO] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0044432 "endoplasmic reticulum part" evidence=ISO] [GO:0048306
"calcium-dependent protein binding" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0051592
"response to calcium ion" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1916412 GO:GO:0048471
GO:GO:0012507 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005789 GO:GO:0051592 GO:GO:0015031
GO:GO:0005768 GO:GO:0030134 CTD:22872 eggNOG:NOG248389
HOGENOM:HOG000230582 HOVERGEN:HBG055626 KO:K14005 OrthoDB:EOG4WDDB3
ChiTaRS:SEC31A EMBL:BC043942 EMBL:BC054358 EMBL:BC071249
EMBL:AK134681 EMBL:AK143455 IPI:IPI00403027 IPI:IPI00853859
IPI:IPI00938457 RefSeq:NP_081245.1 UniGene:Mm.18634
ProteinModelPortal:Q3UPL0 SMR:Q3UPL0 STRING:Q3UPL0
PhosphoSite:Q3UPL0 PaxDb:Q3UPL0 PRIDE:Q3UPL0
Ensembl:ENSMUST00000094578 GeneID:69162 KEGG:mmu:69162
UCSC:uc008yhi.1 UCSC:uc008yhk.2 GeneTree:ENSGT00390000003175
InParanoid:Q3UPL0 OMA:PSASNAY NextBio:328736 Bgee:Q3UPL0
CleanEx:MM_SEC31A Genevestigator:Q3UPL0 Uniprot:Q3UPL0
Length = 1230
Score = 697 (250.4 bits), Expect = 7.3e-85, Sum P(3) = 7.3e-85
Identities = 145/347 (41%), Positives = 220/347 (63%)
Query: 4 IKGINRSASVAFAP--DAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
+K I+R+A A++P + P Y+A GT A +D +FS++A+LEIF+LD D+
Sbjct: 3 LKEIDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTNASLEIFELDLSDPSLDMKSCAT 62
Query: 61 SPSSERFNRLAWGKNGSGSE-DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL 119
SS R+++L WG + S+ D S L+AGG +G+I +++P +I+ + +IA
Sbjct: 63 FSSSHRYHKLIWGPHKMDSKGDVSGVLIAGG-ENGNIILYDPSKIIAGDK---EVVIAQK 118
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
+H GPVR L+ N F NL+ASGA++ EI IWDL+ A P P G + +IS +
Sbjct: 119 DKHTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFATP--MTP--GAKTQPPEDISCI 174
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVASD 238
+WN +VQHILAS S +G VWDL+K +P+I S+ R CS L W+PDVATQ+V+AS+
Sbjct: 175 AWNRQVQHILASASPSGRATVWDLRKNEPIIKVSDHSNRMHCSGLAWHPDVATQMVLASE 234
Query: 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298
+D P +++WD+R SP++ H +G++A++W D LL+C KD + +C + +GE
Sbjct: 235 DDRLPVIQMWDLRFASSPLRVLENHARGILAVAWSMADPELLLSCGKDAKILCSNPNTGE 294
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345
++ ELP T W FDI W P+ P V+SA+SFDG+I +Y+I G S G+
Sbjct: 295 VLYELPTNTQWCFDIQWCPRNPAVLSAASFDGRISVYSIMGGSIDGL 341
Score = 116 (45.9 bits), Expect = 3.7e-77, Sum P(2) = 3.7e-77
Identities = 70/365 (19%), Positives = 130/365 (35%)
Query: 354 PLRAPKWYKRPAGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGMVDSSQQY 413
P P+ Y+ SFG GG ++ P+ + N+ + + Y Q Y
Sbjct: 869 PYPQPQPYQPAQQYSFGTGGA-AAYRPQQPVAPPASNAYPNTPYISPVASYS--GQPQMY 925
Query: 414 YQEPVQSPLHQSV---PGGTYGDNYQQ--PLGPYSNGRGYGASAAYQPAPQPGLFIPPQA 468
+ SP S P + G ++Q P P S+ Y P +P
Sbjct: 926 TAQQASSPTSSSAASFPPPSSGASFQHGGPGAPPSSS-AYALPPGTTGTPPAASELPASQ 984
Query: 469 TQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVPPVS 528
N + A + P + + PP L + ++ + P V + P
Sbjct: 985 RTENQSFQDQASILEGP-QNGW--NDPPALNRVPKKKK--MPENFMPPVPITSPIMNPSG 1039
Query: 529 DARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVVQRP----GMG-SMXXXXXXX 583
D + Q + PGP + P G P G VQ+P GM S
Sbjct: 1040 DPQSQGLQQQPSTPGPLSSHASFPQQHLAGGQPFHG---VQQPLAQTGMPPSFSKPNTEG 1096
Query: 584 XXXXXXXXXXXXXXXXXXXDTSNVPAHQKPVINTLTRLFNETSEALGGSRANPAKKREIE 643
+ P ++ +I L F + + S +P KR+++
Sbjct: 1097 APGAPIGNTIQHVQALPTEKITKKPIPEEHLI--LKTTFEDLIQRCLSSATDPQTKRKLD 1154
Query: 644 DNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDFGTALQIQV-LLTTSDWDECNFW 702
D S+++ L+ KL +S + L + ++++ ++ L + +++TS++ E + +
Sbjct: 1155 DASKRLEFLYDKLREQTLSPTIINGLHSIARSIETRNYSEGLSVHTHIVSTSNFSETSAF 1214
Query: 703 LATLK 707
+ LK
Sbjct: 1215 MPVLK 1219
Score = 112 (44.5 bits), Expect = 7.3e-85, Sum P(3) = 7.3e-85
Identities = 54/176 (30%), Positives = 72/176 (40%)
Query: 409 SSQQYYQEPVQ-SPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQ 467
S Q+ Q P + PL + PG G + Q P +G + P P PG FI
Sbjct: 794 SGQESSQSPYERQPLSKGRPGPVAGHS-QMPRVQTQQYYPHGEN----PPP-PG-FIMQG 846
Query: 468 ATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPV-PP 526
PN AP P P+ P P P + A+QY T G+ Y P PV PP
Sbjct: 847 NVIPNPAAPLPTAPGHMPSQLPPYPQPQPY-QPAQQYSFGTGGAAAY----RPQQPVAPP 901
Query: 527 VSDARGSLP--SQIGAVPG-PKMPNVV-APTPTPTG---FMPMSGSGVVQRPGMGS 575
S+A + P S + + G P+M A +PT + F P S Q G G+
Sbjct: 902 ASNAYPNTPYISPVASYSGQPQMYTAQQASSPTSSSAASFPPPSSGASFQHGGPGA 957
Score = 99 (39.9 bits), Expect = 7.3e-85, Sum P(3) = 7.3e-85
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 354 PLRAP-KWYKRPAGASFGFGGKLVSFHPKS-SAGHTSENSQHAPVHGVDQ--SKYGMVDS 409
PL+ P KW +RP GASF FGGKLV+F + +E + PV + Q ++ ++
Sbjct: 382 PLKKPPKWIRRPVGASFSFGGKLVTFESVAVPLQQGAEQQRRQPVF-ISQVVTEKDFLNR 440
Query: 410 SQQYYQEPVQS 420
S Q Q VQS
Sbjct: 441 SAQL-QHAVQS 450
Score = 58 (25.5 bits), Expect = 3.4e-79, Sum P(3) = 3.4e-79
Identities = 38/129 (29%), Positives = 48/129 (37%)
Query: 448 YGASAAYQPAPQPGL-FIPPQATQPNFTA-----------PAPAPVTSQ-PAMR-PFIPS 493
Y + A Q + L F+P QPN P +SQ P R P
Sbjct: 752 YASLLAAQGSIAAALAFLPDNTNQPNIVQLRDRLCKAQGKPVSGQESSQSPYERQPLSKG 811
Query: 494 TP-PVLRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAP 552
P PV +++ + T Q YP NP PP P I + G +PN AP
Sbjct: 812 RPGPVAGHSQMPRVQT--QQYYPHGENP----PP--------PGFI--MQGNVIPNPAAP 855
Query: 553 TPTPTGFMP 561
PT G MP
Sbjct: 856 LPTAPGHMP 864
Score = 53 (23.7 bits), Expect = 1.6e-70, Sum P(2) = 1.6e-70
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 316 YPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKL 375
YP P + +S+ G+ +Y + S ++ SAA P +GASF GG
Sbjct: 906 YPNTPYISPVASYSGQPQMYTAQQAS----SPTSSSAASFPPPS-----SGASFQHGGP- 955
Query: 376 VSFHPKSSA 384
P SSA
Sbjct: 956 -GAPPSSSA 963
Score = 48 (22.0 bits), Expect = 3.8e-78, Sum P(3) = 3.8e-78
Identities = 11/18 (61%), Positives = 11/18 (61%)
Query: 668 KLVQLCQALDNNDFGTAL 685
K VQL QALD N G L
Sbjct: 728 KAVQLTQALDTNTVGALL 745
Score = 42 (19.8 bits), Expect = 3.6e-72, Sum P(3) = 3.6e-72
Identities = 15/56 (26%), Positives = 22/56 (39%)
Query: 425 SVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAPAPAP 480
S+ GG+ Q+ + S+ G P P L IP Q+ Q + P P
Sbjct: 332 SIMGGSIDGLRQKQVDKLSSSFG-NLDPFGTGQPLPPLQIPQQSAQHSIVLPLKKP 386
>UNIPROTKB|Q9NQW1 [details] [associations]
symbol:SEC31B "Protein transport protein Sec31B"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0044432 "endoplasmic reticulum part"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0012507 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789
GO:GO:0015031 EMBL:AL133352 eggNOG:NOG248389 HOGENOM:HOG000230582
HOVERGEN:HBG055626 KO:K14005 EMBL:AF274863 EMBL:AL080141
EMBL:BX640914 EMBL:BC034946 EMBL:BC044569 EMBL:BC144313
IPI:IPI00023442 IPI:IPI00426029 IPI:IPI00853086 IPI:IPI00923389
IPI:IPI00954279 PIR:T12526 RefSeq:NP_056305.1 UniGene:Hs.18889
ProteinModelPortal:Q9NQW1 SMR:Q9NQW1 IntAct:Q9NQW1 STRING:Q9NQW1
PhosphoSite:Q9NQW1 DMDM:74762753 PaxDb:Q9NQW1 PRIDE:Q9NQW1
DNASU:25956 Ensembl:ENST00000370345 Ensembl:ENST00000451524
GeneID:25956 KEGG:hsa:25956 UCSC:uc001krc.1 UCSC:uc010qpo.1
CTD:25956 GeneCards:GC10M102237 HGNC:HGNC:23197 HPA:HPA035882
HPA:HPA040819 MIM:610258 neXtProt:NX_Q9NQW1 PharmGKB:PA162402792
InParanoid:Q9NQW1 OMA:RLECLYE OrthoDB:EOG470TGM PhylomeDB:Q9NQW1
ChiTaRS:SEC31B GenomeRNAi:25956 NextBio:47564 ArrayExpress:Q9NQW1
Bgee:Q9NQW1 CleanEx:HS_SEC31B Genevestigator:Q9NQW1 Uniprot:Q9NQW1
Length = 1179
Score = 680 (244.4 bits), Expect = 1.0e-84, Sum P(4) = 1.0e-84
Identities = 143/343 (41%), Positives = 213/343 (62%)
Query: 4 IKGINRSASVAFAPDA--P-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
+K + R A A++P + P Y+A GT A +D SFS++ LEIF++DF+ DL G
Sbjct: 3 LKELERPAVQAWSPASQYPLYLATGTSAQQLDSSFSTNGTLEIFEVDFRDPSLDLKHRGV 62
Query: 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS 120
+ RF++L WG GSG + S G++ GG +G + ++N ++SSG+ P+IA
Sbjct: 63 LSALSRFHKLVWGSFGSGLLESS-GVIVGGGDNGMLILYNVTHILSSGK---EPVIAQKQ 118
Query: 121 RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGE-ISFV 179
+H G VR L+ N F NLLASGA D EI IWDL+ + P G+ S E I +
Sbjct: 119 KHTGAVRALDLNPFQGNLLASGASDSEIFIWDLNN----LNVPMTLGSKSQQPPEDIKAL 174
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVASD 238
SWN + QHIL+S +G VVWDL+K +P+I S+ R CS L W+PD+ATQLV+ S+
Sbjct: 175 SWNRQAQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGLAWHPDIATQLVLCSE 234
Query: 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298
+D P ++LWD+R SP+K H++G++++SW D+ LLT AKD++ +C + S E
Sbjct: 235 DDRLPVIQLWDLRFASSPLKVLESHSRGILSVSWSQADAELLLTSAKDSQILCRNLGSSE 294
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341
+V +LP ++W FD+ W P+ P V SA+SF+G I +Y++ G S
Sbjct: 295 VVYKLPTQSSWCFDVQWCPRDPSVFSAASFNGWISLYSVMGRS 337
Score = 99 (39.9 bits), Expect = 1.0e-84, Sum P(4) = 1.0e-84
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 354 PLRAP-KWYKRPAGASFGFGGKLVSFHPKSSAGH 386
PL+ P KW +RP G SF FGGKLV+F S+ H
Sbjct: 376 PLKKPPKWIRRPTGVSFAFGGKLVTFGLPSTPAH 409
Score = 75 (31.5 bits), Expect = 1.0e-84, Sum P(4) = 1.0e-84
Identities = 53/183 (28%), Positives = 74/183 (40%)
Query: 394 APVHGVDQSKYGMVDSSQQYYQEPVQSP-----LHQSVPGGTYGDNYQQPLGPYSNGRGY 448
A +H + S Y + SQ +Q P SP QS P ++ P PY R
Sbjct: 805 ATLHSKETSSYRL--GSQPSHQVPTPSPRPRVFTPQSSPAMPLAPSH--P-SPYQGPRTQ 859
Query: 449 GASAAYQPAPQPGLFIPPQATQPNFTAPAPAPVTSQPAM----RPFIPSTPPVLRNAEQY 504
S Y+ PG PQA QP +P P +SQP + R +P+ PV
Sbjct: 860 NISD-YRA---PG----PQAIQPLPLSPGVRPASSQPQLLGGQRVQVPN--PV---GFPG 906
Query: 505 QQPTLGSQL---YPGVSNPGYP-VPPVSDARGSLPSQ-IGAVPGPKMPNVVAPTPT-PTG 558
P GS L PG+ PG +P LP + +G PG + + AP + P
Sbjct: 907 TWPLPGSPLPMACPGIMRPGSTSLPETPRLFPLLPLRPLG--PGRMVSHTPAPPASFPVP 964
Query: 559 FMP 561
++P
Sbjct: 965 YLP 967
Score = 69 (29.3 bits), Expect = 1.0e-84, Sum P(4) = 1.0e-84
Identities = 19/74 (25%), Positives = 40/74 (54%)
Query: 639 KREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDF--GTALQIQVLLTTSDW 696
KR++E+ ++++ L+ KL G +S + L ++ + +D F G A+ QV S +
Sbjct: 1099 KRKLEEAAQRLEYLYEKLCEGTLSPHVVAGLHEVARCVDAGSFEQGLAVHAQVA-GCSSF 1157
Query: 697 DECNFWLATLKRMI 710
E + ++ LK ++
Sbjct: 1158 SEVSSFMPILKAVL 1171
Score = 68 (29.0 bits), Expect = 5.4e-84, Sum P(4) = 5.4e-84
Identities = 25/92 (27%), Positives = 41/92 (44%)
Query: 449 GASAAYQPAPQPGLFIPPQATQPNFTAPAP--APVTS-QPAMRPFIPSTPPVLRNAEQYQ 505
G +++ AP P + F PAP APV S P ++ +PS PPV ++ +
Sbjct: 989 GPQDSWKEAPAPRGNLQRNKLPETFMPPAPITAPVMSLTPELQGILPSQPPV--SSVSHA 1046
Query: 506 QPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQ 537
P + +L + + +PP R LP +
Sbjct: 1047 PPGVPGELSLQLQH----LPPEKMERKELPPE 1074
Score = 65 (27.9 bits), Expect = 1.1e-83, Sum P(4) = 1.1e-83
Identities = 42/148 (28%), Positives = 52/148 (35%)
Query: 414 YQEPVQSPLHQSVPG-GTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPG--LFIP-PQAT 469
+ P Q P Q++ G QPL P S G A+ QP G + +P P
Sbjct: 849 HPSPYQGPRTQNISDYRAPGPQAIQPL-PLSPGV---RPASSQPQLLGGQRVQVPNPVGF 904
Query: 470 QPNFTAP-APAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVPPVS 528
+ P +P P+ MRP S P R LG PG P PP S
Sbjct: 905 PGTWPLPGSPLPMACPGIMRPGSTSLPETPRLFPLLPLRPLG----PGRMVSHTPAPPAS 960
Query: 529 DARGSLPSQIGAVPGPKMPNVVAPTPTP 556
LP GA +P TP P
Sbjct: 961 FPVPYLPGDPGAPCSSVLPTTGILTPHP 988
Score = 53 (23.7 bits), Expect = 2.0e-82, Sum P(4) = 2.0e-82
Identities = 24/92 (26%), Positives = 42/92 (45%)
Query: 490 FIP---STPPV--LRNAEQYQQPTLGSQLYPGVSNPGYPVPPVS-----DARGSLPSQIG 539
F+P + PPV LR+ + Q GS + G +P +P P + ++ + ++G
Sbjct: 763 FLPRDCAQPPVQQLRDRLFHAQ---GSAVL-GQQSPPFPFPRIVVGATLHSKETSSYRLG 818
Query: 540 AVPGPKMPNVVAPTPTPTGFMPMSGSGVVQRP 571
+ P ++P P+P P F P S + P
Sbjct: 819 SQPSHQVPT---PSPRPRVFTPQSSPAMPLAP 847
Score = 40 (19.1 bits), Expect = 1.1e-74, Sum P(4) = 1.1e-74
Identities = 16/61 (26%), Positives = 26/61 (42%)
Query: 472 NFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPT-----LGSQLYP-GV-SNPGYPV 524
+F+ P P P P PP+ + + ++PT G +L G+ S P + V
Sbjct: 352 SFSKGQPLPPLQVPEQVAQAPLIPPLKKPPKWIRRPTGVSFAFGGKLVTFGLPSTPAHLV 411
Query: 525 P 525
P
Sbjct: 412 P 412
Score = 38 (18.4 bits), Expect = 7.4e-81, Sum P(4) = 7.4e-81
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 608 PAHQKPVINTLTRLFN-ETSEALGGSRANPA 637
P+HQ P + R+F ++S A+ + ++P+
Sbjct: 821 PSHQVPTPSPRPRVFTPQSSPAMPLAPSHPS 851
>UNIPROTKB|Q5R4F4 [details] [associations]
symbol:SEC31A "Protein transport protein Sec31A"
species:9601 "Pongo abelii" [GO:0030134 "ER to Golgi transport
vesicle" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0012507 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
GO:GO:0030134 CTD:22872 HOVERGEN:HBG055626 KO:K14005 EMBL:CR861295
RefSeq:NP_001126980.1 UniGene:Pab.18492 ProteinModelPortal:Q5R4F4
GeneID:100173999 KEGG:pon:100173999 Uniprot:Q5R4F4
Length = 1106
Score = 694 (249.4 bits), Expect = 3.3e-84, Sum P(3) = 3.3e-84
Identities = 144/347 (41%), Positives = 219/347 (63%)
Query: 4 IKGINRSASVAFAP--DAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
+K ++R+A A++P + P Y+A GT A +D +FS++A+LEIF+LD D+
Sbjct: 3 LKEVDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTNASLEIFELDLSDPSLDMKSCAT 62
Query: 61 SPSSERFNRLAWGKNGSGSE-DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL 119
SS R+++L WG S+ D S L+AGG +G+I +++P +I+ + +IA
Sbjct: 63 FSSSHRYHKLIWGPYKMDSKGDVSGVLIAGG-ENGNIILYDPSKIIAGDK---EVVIAQN 118
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
+H GPVR L+ N F NL+ASGA++ EI IWDL+ A P P G + +IS +
Sbjct: 119 DKHTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFATP--MTP--GAKTQPPEDISCI 174
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVASD 238
+WN +VQHILAS S +G VWDL+K +P+I S+ R CS L W+PDVATQ+V+AS+
Sbjct: 175 AWNRQVQHILASASPSGRATVWDLRKNEPIIKVSDHSNRMHCSGLAWHPDVATQMVLASE 234
Query: 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298
+D P +++WD+R SP++ H +G++A++W D LL+C KD + +C + +GE
Sbjct: 235 DDRLPVIQMWDLRFASSPLRVLENHARGILAIAWSMADPELLLSCGKDAKILCSNPNTGE 294
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345
++ ELP T W FDI W P+ P V+SA+SFDG+I +Y+I G S G+
Sbjct: 295 VLYELPTNTQWCFDIQWCPRNPAVLSAASFDGRISVYSIMGGSTDGL 341
Score = 107 (42.7 bits), Expect = 3.3e-84, Sum P(3) = 3.3e-84
Identities = 28/72 (38%), Positives = 35/72 (48%)
Query: 354 PLRAP-KWYKRPAGASFGFGGKLVSFH----PKSSAGHTSENSQHAPVHGVDQSKYGMVD 408
PL+ P KW +RP GASF FGGKLV+F P + H + V K +
Sbjct: 382 PLKKPPKWIRRPVGASFSFGGKLVTFENVRMPSHQGAEQQQQQHHVFISQVVTEKEFLSR 441
Query: 409 SSQQYYQEPVQS 420
S Q Q+ VQS
Sbjct: 442 SDQ--LQQAVQS 451
Score = 94 (38.1 bits), Expect = 3.3e-84, Sum P(3) = 3.3e-84
Identities = 56/274 (20%), Positives = 101/274 (36%)
Query: 458 PQPGLFIPPQATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGV 517
P PG FI PN P TS M +P P R + P +++
Sbjct: 839 PPPG-FIMHGNVNPNAAGQLP---TSPGHMHTQVPPYPQPQRPQNGWNDPPALNRVPKKK 894
Query: 518 SNPGY---PVP-------PVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGV 567
P PVP P+ D + + Q + P P P P G G
Sbjct: 895 KMPENFMPPVPITSPIMNPLGDPQSQMLQQQPSAPVPLSSQSSFPQPHLPGGQHFHG--- 951
Query: 568 VQRP-GMGSMXXXXXXXXXXXXXXX-XXXXXXXXXXXDTSNVPAHQKPVINT---LTRLF 622
+Q+P G M T + +KP+ + L F
Sbjct: 952 IQQPLGQTGMPPSFSKPNIEGAPGAPIGNTFQHVQSLPTKKIT--KKPIPDEHLILKTTF 1009
Query: 623 NETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDFG 682
+ + S +P KR+++D S+++ L+ KL +S L + ++++ ++
Sbjct: 1010 EDLIQRCLSSATDPQTKRKLDDASKRLEFLYDKLREQTLSPTITSGLHNIARSIETRNYS 1069
Query: 683 TALQIQV-LLTTSDWDECNFWLATLKRMIKTRQN 715
L + +++TS++ E + ++ LK ++ T+ N
Sbjct: 1070 EGLTMHTHIVSTSNFSETSAFMPVLK-VVLTQAN 1102
Score = 45 (20.9 bits), Expect = 7.9e-70, Sum P(2) = 7.9e-70
Identities = 15/35 (42%), Positives = 17/35 (48%)
Query: 411 QQYYQEPV----QSPLHQS-VPGGTYGDNYQQPLG 440
QQ PV QS Q +PGG + QQPLG
Sbjct: 923 QQQPSAPVPLSSQSSFPQPHLPGGQHFHGIQQPLG 957
Score = 41 (19.5 bits), Expect = 1.2e-78, Sum P(3) = 1.2e-78
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 668 KLVQLCQALDNNDFGTAL 685
K VQL QA+D + G L
Sbjct: 729 KAVQLTQAMDTSTVGVLL 746
Score = 40 (19.1 bits), Expect = 3.6e-77, Sum P(3) = 3.6e-77
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 458 PQPGLFIPPQATQPNFTAPAPAP 480
P P L IP Q Q + P P
Sbjct: 364 PLPPLQIPQQTAQHSIVLPLKKP 386
Score = 37 (18.1 bits), Expect = 3.2e-78, Sum P(3) = 3.2e-78
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 643 EDNSRKIGALFAKLNSGDISKNAADKLVQ 671
ED +KI K++ +++ +D++ Q
Sbjct: 498 EDLGKKIALALNKVDGANVALKDSDQVAQ 526
>RGD|620233 [details] [associations]
symbol:Sec31a "SEC31 homolog A (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005768 "endosome" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030134 "ER to Golgi transport vesicle"
evidence=IEA;ISO;ISS] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0044432 "endoplasmic reticulum part"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA;ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA;ISO] [GO:0051592 "response to calcium ion"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF034582 RGD:620233 GO:GO:0048471 GO:GO:0012507
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005789 GO:GO:0051592 GO:GO:0015031 GO:GO:0005768
GO:GO:0030134 CTD:22872 eggNOG:NOG248389 HOGENOM:HOG000230582
HOVERGEN:HBG055626 KO:K14005 OrthoDB:EOG4WDDB3
GeneTree:ENSGT00390000003175 EMBL:BC085722 IPI:IPI00210147
IPI:IPI00515833 PIR:T14150 RefSeq:NP_148981.1 UniGene:Rn.6322
ProteinModelPortal:Q9Z2Q1 IntAct:Q9Z2Q1 STRING:Q9Z2Q1
PhosphoSite:Q9Z2Q1 PRIDE:Q9Z2Q1 Ensembl:ENSRNOT00000033489
GeneID:93646 KEGG:rno:93646 InParanoid:Q9Z2Q1 NextBio:617782
ArrayExpress:Q9Z2Q1 Genevestigator:Q9Z2Q1 Uniprot:Q9Z2Q1
Length = 1249
Score = 694 (249.4 bits), Expect = 5.0e-84, Sum P(3) = 5.0e-84
Identities = 145/347 (41%), Positives = 220/347 (63%)
Query: 4 IKGINRSASVAFAP--DAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
+K I+R+A A++P + P Y+A GT A +D +FS++A+LEIF+LD D+
Sbjct: 3 LKEIDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTNASLEIFELDLSDPSLDMKSCAT 62
Query: 61 SPSSERFNRLAWGKNGSGSE-DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL 119
SS R+++L WG + S+ D S L+AGG +G+I +++P +I+ + +IA
Sbjct: 63 FSSSHRYHKLIWGPHKMDSKGDVSGVLIAGG-ENGNIILYDPSKIIAGDK---EVVIAQK 118
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
+H GPVR L+ N F NL+ASGA++ EI IWDL+ A P P G + +IS +
Sbjct: 119 DKHTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFATP--MTP--GAKTQPPEDISCI 174
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVASD 238
+WN +VQHILAS S +G VWDL+K +P+I S+ R CS L W+PDVATQ+V+AS+
Sbjct: 175 AWNRQVQHILASASPSGRATVWDLRKNEPIIKVSDHSNRMHCSGLAWHPDVATQMVLASE 234
Query: 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298
+D P +++WD+R SP++ H +G++A++W D LL+C KD + +C + +GE
Sbjct: 235 DDRLPVVQMWDLRFASSPLRVLENHARGILAIAWSMADPELLLSCGKDAKILCSNPNTGE 294
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345
++ ELP T W FDI W P+ P V+SA+SFDG+I +Y+I G S G+
Sbjct: 295 VLYELPTNTQWCFDIQWCPRNPAVLSAASFDGRIRVYSIMGGSIDGL 341
Score = 107 (42.7 bits), Expect = 5.0e-84, Sum P(3) = 5.0e-84
Identities = 59/302 (19%), Positives = 108/302 (35%)
Query: 413 YYQEPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPN 472
Y +P SP S P P P S+G + P +PP T
Sbjct: 957 YTAQPASSPTSSSAP--------LPP--PPSSGASFQHGGPGAPPSSSAYALPPGTTG-- 1004
Query: 473 FTAPAPAPVTSQPAMRPFIP-STPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDAR 531
T PA + + + P + PP L + ++ L P V + P D +
Sbjct: 1005 -TPPAASELPASQRTGPQNGWNDPPALNRVPKKKK--LPENFMPPVPITSPIMNPGGDPQ 1061
Query: 532 GSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVVQRP--GMGSMXXXXXXXXXXXXX 589
Q + GP+ + P P G P G +Q+P G
Sbjct: 1062 PQGLQQQPSASGPRSSHASFPQPHLAGGQPFHG---IQQPLAQTGMPPSFSKPNTEGAPG 1118
Query: 590 XXXXXXXXXXXXXDTSNVPAHQKPVINT---LTRLFNETSEALGGSRANPAKKREIEDNS 646
T + +KP+ + L F + + S +P KR+++D S
Sbjct: 1119 APIGNTIQHVQALPTEKIT--KKPIPDEHLILKTTFEDLIQRCLSSATDPQTKRKLDDAS 1176
Query: 647 RKIGALFAKLNSGDISKNAADKLVQLCQALDNNDFGTALQIQV-LLTTSDWDECNFWLAT 705
+++ L+ KL +S L + ++++ ++ L + +++TS++ E + ++
Sbjct: 1177 KRLECLYDKLRDQTLSPTIISGLHSIARSIETRNYSEGLTVHTHIVSTSNFSETSAFMPV 1236
Query: 706 LK 707
LK
Sbjct: 1237 LK 1238
Score = 100 (40.3 bits), Expect = 5.0e-84, Sum P(3) = 5.0e-84
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 354 PLRAP-KWYKRPAGASFGFGGKLVSFHPKSSAGHT-SENSQHAPVHGVDQ--SKYGMVDS 409
PL+ P KW +RP GASF FGGKLV+F + +E + PV + Q ++ +
Sbjct: 382 PLKKPPKWIRRPVGASFSFGGKLVTFENVTGQPQQGAEQPRRQPVF-ISQVVTEKDFLSR 440
Query: 410 SQQYYQEPVQS 420
S+Q Q VQS
Sbjct: 441 SEQL-QHVVQS 450
Score = 90 (36.7 bits), Expect = 3.0e-82, Sum P(3) = 3.0e-82
Identities = 53/176 (30%), Positives = 68/176 (38%)
Query: 410 SQQYYQEPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQAT 469
SQQYY + +P +V T+ D L + + P P PG FI
Sbjct: 828 SQQYYPQVRIAP---TVT--TWSDRTPTALPSHPPAACPSDTQGGNPPP-PG-FIMHGNV 880
Query: 470 QPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLY-PG--VSNPG---YP 523
PN AP P + P P P + A+QY T GS +Y P V+ P YP
Sbjct: 881 VPNSPAPLPTSPGHMHSQPPPYPQPQPY-QPAQQYSLGTGGSAVYRPQQPVAPPASKRYP 939
Query: 524 ----VPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVVQRPGMGS 575
V PV+ G P A P + AP P P P SG+ Q G G+
Sbjct: 940 NAPYVSPVASYSGQ-PHMYTAQPASSPTSSSAPLPPP----PSSGASF-QHGGPGA 989
Score = 82 (33.9 bits), Expect = 3.4e-73, Sum P(2) = 3.4e-73
Identities = 54/216 (25%), Positives = 71/216 (32%)
Query: 364 PAGASFGFGGKLVSFHPK---SSAGHTSENS----QHAPVHGVDQSKYGMVDSSQQYYQE 416
P F G +V P +S GH Q P Q G S+ Q+
Sbjct: 869 PPPPGFIMHGNVVPNSPAPLPTSPGHMHSQPPPYPQPQPYQPAQQYSLGTGGSAVYRPQQ 928
Query: 417 PVQSPLHQSVPGGTYGDNYQQPLGPYSNG-RGYGASAAYQPAPQPGLFIPPQATQPNFT- 474
PV P + P Y P+ YS Y A A P PP ++ +F
Sbjct: 929 PVAPPASKRYPNAPY----VSPVASYSGQPHMYTAQPASSPTSSSAPLPPPPSSGASFQH 984
Query: 475 -APAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDARGS 533
P P +S A+ P TPP Q+ G Q G ++P P +
Sbjct: 985 GGPGAPPSSSAYALPPGTTGTPPAASELPASQRT--GPQ--NGWNDP--PALNRVPKKKK 1038
Query: 534 LPSQIGAVPGPKMPNVVAP--TPTPTGFMPM-SGSG 566
LP P P ++ P P P G S SG
Sbjct: 1039 LPENF-MPPVPITSPIMNPGGDPQPQGLQQQPSASG 1073
Score = 74 (31.1 bits), Expect = 2.4e-72, Sum P(2) = 2.4e-72
Identities = 58/240 (24%), Positives = 79/240 (32%)
Query: 346 GDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSS-AGHTSENSQHAPVHGVDQSKY 404
G + P P+ Y+ S G GG V + P+ A S+ +AP S
Sbjct: 893 GHMHSQPPPYPQPQPYQPAQQYSLGTGGSAV-YRPQQPVAPPASKRYPNAPYVSPVASYS 951
Query: 405 GMVDSSQQYYQEPVQSPLHQSVP---GGTYGDNYQQ--PLGPYSNGRGYGASAAYQPAPQ 459
G Y +P SP S P + G ++Q P P S+ Y P
Sbjct: 952 GQ---PHMYTAQPASSPTSSSAPLPPPPSSGASFQHGGPGAPPSSS-AYALPPGTTGTPP 1007
Query: 460 PGLFIPP-QATQPNFTAPAPAPVTSQPAMR-------PFIPSTPPVLRNAEQYQQPTLGS 511
+P Q T P P + P + P +P T P++ N QP G
Sbjct: 1008 AASELPASQRTGPQNGWNDPPALNRVPKKKKLPENFMPPVPITSPIM-NPGGDPQPQ-GL 1065
Query: 512 QLYPGVSNPGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVVQRP 571
Q P S P S A P G P + +A T P F + G P
Sbjct: 1066 QQQPSASGPRS-----SHASFPQPHLAGGQPFHGIQQPLAQTGMPPSFSKPNTEGAPGAP 1120
Score = 59 (25.8 bits), Expect = 9.1e-71, Sum P(2) = 9.1e-71
Identities = 23/69 (33%), Positives = 30/69 (43%)
Query: 316 YPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKL 375
YP P V +S+ G+ +Y + S S+APL P +GASF GG
Sbjct: 938 YPNAPYVSPVASYSGQPHMYTAQPAS-----SPTSSSAPLPPPP----SSGASFQHGGP- 987
Query: 376 VSFHPKSSA 384
P SSA
Sbjct: 988 -GAPPSSSA 995
Score = 48 (22.0 bits), Expect = 7.7e-78, Sum P(3) = 7.7e-78
Identities = 11/18 (61%), Positives = 11/18 (61%)
Query: 668 KLVQLCQALDNNDFGTAL 685
K VQL QALD N G L
Sbjct: 729 KAVQLTQALDTNTVGALL 746
Score = 42 (19.8 bits), Expect = 9.4e-72, Sum P(3) = 9.4e-72
Identities = 15/56 (26%), Positives = 22/56 (39%)
Query: 425 SVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAPAPAP 480
S+ GG+ Q+ + S+ G P P L IP Q +Q + P P
Sbjct: 332 SIMGGSIDGLRQKQVDKLSSSFG-NLDPFGTGQPLPPLQIPQQTSQHSIVLPLKKP 386
>UNIPROTKB|F1RVD4 [details] [associations]
symbol:SEC31A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051592 "response to calcium ion" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0048306 "calcium-dependent protein binding" evidence=IEA]
[GO:0030134 "ER to Golgi transport vesicle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005783 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0051592 GO:GO:0030134 GeneTree:ENSGT00390000003175
OMA:PSASNAY EMBL:FP067341 EMBL:CU928349 Ensembl:ENSSSCT00000010124
Uniprot:F1RVD4
Length = 1220
Score = 695 (249.7 bits), Expect = 4.1e-83, Sum P(3) = 4.1e-83
Identities = 144/347 (41%), Positives = 218/347 (62%)
Query: 4 IKGINRSASVAFAP--DAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
+K ++R+A A++P + P Y+A GT A +D +FS+SA+LEIF+LD D+
Sbjct: 3 LKEVDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTSASLEIFELDLSDPSLDMKSCAT 62
Query: 61 SPSSERFNRLAWGKNGSGSEDFSLG-LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL 119
SS R+++L WG + S+ G L+AGG +G+ +++P +I+ + +IA
Sbjct: 63 FSSSHRYHKLIWGPHKMDSQGNVSGVLIAGG-ENGNTILYDPSKIIAGDK---EVVIAQN 118
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
+H GPVR L+ N F NL+ASGA++ EI IWDL+ A P P G + +IS +
Sbjct: 119 DKHTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFATP--MTP--GAKTQPPEDISCI 174
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVASD 238
+WN +VQHILAS S +G VWDL+K +P+I S+ R CS L W+PDVATQ+V+AS+
Sbjct: 175 AWNRQVQHILASASPSGRATVWDLRKNEPIIKVSDHSNRMHCSGLAWHPDVATQMVLASE 234
Query: 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298
+D P +++WD+R SP++ H +G++A++W D LLTC KD + +C + +GE
Sbjct: 235 DDRLPVVQMWDLRFASSPLRVLENHARGILAIAWSMADPELLLTCGKDAKILCSNPNTGE 294
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345
++ ELP T W FDI W P+ P V+SA+SFDG+I +Y+I G S G+
Sbjct: 295 VLYELPTNTQWCFDIQWCPRNPAVLSAASFDGRISVYSIMGGSADGL 341
Score = 124 (48.7 bits), Expect = 8.2e-78, Sum P(2) = 8.2e-78
Identities = 76/381 (19%), Positives = 144/381 (37%)
Query: 345 VGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKY 404
+G + P P+ Y+ S G GG V + P+ ++ N+ P + Y
Sbjct: 861 LGHVHTQVPPYPQPQPYQPAQQYSLGTGGSAV-YRPQQPVAPSASNTY--P-----NTPY 912
Query: 405 GMVDSSQQYY-QEPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLF 463
+ S+ Y Q + + HQ+ P T PL P S+G + P
Sbjct: 913 --ISSASSYPGQSQLYTAQHQASPP-TSSPTASFPLPP-SSGASFQHGGPGAPPSSSAYA 968
Query: 464 IPPQATQPNFTAPAPAPVTSQPAMRPFIP-STPPVLRNAEQYQQPTLGSQLYPGVSNPGY 522
+PP T T PA + + + P + PP L + ++ + P V
Sbjct: 969 LPPGTTG---TLPAASELPASQRTGPQNGWNDPPALNRVPKKKK--MPENFTPPVPITSP 1023
Query: 523 PVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVVQRPG-MGSMXXXXX 581
+ P+ D + + Q + P P P G P G ++Q G +G
Sbjct: 1024 IMNPLGDPQSQMLQQQPSAPVPLSSQASFLQPHLPGGQPFHG--ILQPLGQVGMPPSFSK 1081
Query: 582 XXXXXXXXXXXXXXXXXXXXXDTSNVPAHQKPVIN---TLTRLFNETSEALGGSRANPAK 638
T + +KP+ + L F + + S +P
Sbjct: 1082 PNVEGAPGAPIGNTIQHVQSLPTEKIT--KKPIPDEHLVLKTTFEDLIQRCLSSATDPQT 1139
Query: 639 KREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDFGTALQIQV-LLTTSDWD 697
KR+++D S+++ L+ KL +S L + ++++ ++ L I +++TS++
Sbjct: 1140 KRKLDDASKRLEFLYDKLREQTLSPTIISGLHNIARSIETRNYSKGLTIHTHVVSTSNFS 1199
Query: 698 ECNFWLATLKRMIKTRQNVRL 718
E + ++ LK ++ T Q ++L
Sbjct: 1200 ETSAFMPVLK-VVLT-QAIKL 1218
Score = 98 (39.6 bits), Expect = 4.1e-83, Sum P(3) = 4.1e-83
Identities = 28/73 (38%), Positives = 35/73 (47%)
Query: 354 PLRAP-KWYKRPAGASFGFGGKLVSF-----HPKSSAGHTSENSQHAPVHGVDQSKYGMV 407
PL+ P KW +RP GASF FGGKLV+F P A H + V + +
Sbjct: 382 PLKKPPKWIRRPVGASFSFGGKLVTFASVRAQPPQGAEPQQPQQHHVLISQVVTEQEFLK 441
Query: 408 DSSQQYYQEPVQS 420
S Q Q+ VQS
Sbjct: 442 RSDQ--LQQVVQS 452
Score = 98 (39.6 bits), Expect = 4.1e-83, Sum P(3) = 4.1e-83
Identities = 47/173 (27%), Positives = 65/173 (37%)
Query: 414 YQEPVQSPLH-QSVPGGTYGD---NYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQAT 469
+QE +SP Q +P G G + Q P P +G + P P F+ +
Sbjct: 798 HQESPKSPYERQQLPKGRPGPVAGHTQMPRVPAQQYYPHGEN------PPPPAFVMHGSG 851
Query: 470 QPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLY-------PGVSNPGY 522
PN A AP P+ P P P + A+QY T GS +Y P SN Y
Sbjct: 852 HPN--AGAPTPLGHVHTQVPPYPQPQPY-QPAQQYSLGTGGSAVYRPQQPVAPSASNT-Y 907
Query: 523 PVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVVQRPGMGS 575
P P + S P Q + +PT + +P S Q G G+
Sbjct: 908 PNTPYISSASSYPGQSQLYTAQHQASPPTSSPTASFPLPPSSGASFQHGGPGA 960
Score = 61 (26.5 bits), Expect = 3.6e-71, Sum P(2) = 3.6e-71
Identities = 42/176 (23%), Positives = 64/176 (36%)
Query: 316 YPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKL 375
YP P + SASS+ G+ +Y + + S ++ PL P +GASF GG
Sbjct: 907 YPNTPYISSASSYPGQSQLYTAQHQASPPTS-SPTASFPL-PPS-----SGASFQHGGPG 959
Query: 376 VSFHPKSSAGHTSENSQHAPVHGVDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGT-YGDN 434
P SS+ + + + Q + +P P VP +N
Sbjct: 960 A---PPSSSAYALPPGTTGTLPAASELPASQRTGPQNGWNDP---PALNRVPKKKKMPEN 1013
Query: 435 YQQPL---GPYSNGRGYGASAAYQPAPQPGLFIPPQAT--QPNFTAPAPAPVTSQP 485
+ P+ P N G S Q P + + QA+ QP+ P QP
Sbjct: 1014 FTPPVPITSPIMNPLGDPQSQMLQQQPSAPVPLSSQASFLQPHLPGGQPFHGILQP 1069
Score = 43 (20.2 bits), Expect = 2.4e-77, Sum P(3) = 2.4e-77
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 643 EDNSRKIGALFAKLNSGDISKNAADKLVQ 671
ED +KI K++ D++ +D+L Q
Sbjct: 499 EDLGKKIALALNKVDGPDVALTDSDQLAQ 527
Score = 41 (19.5 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 668 KLVQLCQALDNNDFGTAL 685
+ VQL QA+D N G L
Sbjct: 730 RAVQLTQAVDTNAVGVLL 747
Score = 39 (18.8 bits), Expect = 3.7e-71, Sum P(3) = 3.7e-71
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 458 PQPGLFIPPQATQPNFTAPAPAP 480
P P L IP Q Q + P P
Sbjct: 364 PLPPLQIPQQTAQHSVVLPLKKP 386
>ASPGD|ASPL0000002981 [details] [associations]
symbol:AN6257 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006998 "nuclear
envelope organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 EMBL:AACD01000107 EMBL:BN001301 eggNOG:NOG248389
KO:K14005 InterPro:IPR009917 Pfam:PF07304 RefSeq:XP_663861.1
STRING:Q5AZM3 GeneID:2871160 KEGG:ani:AN6257.2 HOGENOM:HOG000048339
OMA:NQPPPMM OrthoDB:EOG4RR9RS Uniprot:Q5AZM3
Length = 1282
Score = 606 (218.4 bits), Expect = 1.1e-82, Sum P(3) = 1.1e-82
Identities = 128/345 (37%), Positives = 194/345 (56%)
Query: 1 MACIKGINRSASVAFAPDA--PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDR--DLL 56
M ++ I R+A+ A++P A P +A GT AGAVD FS+ LE++ L +ED +L
Sbjct: 1 MVRLREIPRTATFAWSPGAASPLIATGTRAGAVDADFSNETCLELWDLALGNEDAGAELQ 60
Query: 57 LVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLI 116
V + + FN LAW + SED S G++AGGL GS+ +W+ L+S + ++
Sbjct: 61 PVAKIDTDSGFNDLAW----TDSEDNSRGIIAGGLESGSLGLWDADKLLSGAS---DAVL 113
Query: 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEI 176
+ S+H G ++ L+FN +LLA+G GE+ I DL+ P G+ +A +I
Sbjct: 114 SKSSKHSGAIKALQFNPRHSSLLATGGAKGELYISDLNDLENPYRL----GSSTARADDI 169
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVA 236
+ WN KV HIL + S G VWD+K +K ++ + ++ S + W+P T+LV A
Sbjct: 170 ECLDWNKKVAHILVTGSSAGFVTVWDVKTRKESLTLNNMGRKAVSAVAWDPTKPTKLVTA 229
Query: 237 SDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296
+ +S P + LWD+RN+ +P + GH GV+++SWC D LL+ KDNRTICW+ +
Sbjct: 230 TPHESDPIINLWDLRNSHAPERTLRGHEAGVLSLSWCNQDPDLLLSSGKDNRTICWNPQT 289
Query: 297 GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341
G E P TNW F W P+ P + +SFDG+I I I+ S
Sbjct: 290 GISYGEFPVVTNWTFQTRWNPRNPNFFATASFDGRISIQTIQNTS 334
Score = 194 (73.4 bits), Expect = 1.1e-82, Sum P(3) = 1.1e-82
Identities = 72/290 (24%), Positives = 115/290 (39%)
Query: 440 GPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAPAPA-PVTS--QPAMRPF--IPST 494
GP G G + + P P+ G+ PP+ T P AP P+++ P P+ +P +
Sbjct: 993 GPPPAGAGPQRTPSVPPPPK-GVPPPPRMTSPPSAGQAPPNPLSAVPPPPANPYAAVPQS 1051
Query: 495 PPVLRNAEQYQQPTLGSQLY---PGVSNPGYPVPPVSDARGSLPSQIGAVPGPKMPNVVA 551
P V A P GS Y P + P P A+ + P P P P A
Sbjct: 1052 PSVGSMAPPASIPR-GSSPYNAPPTIPPPSNRYAPSPAAQAASPQLQARAPVPPPPQAAA 1110
Query: 552 -PTPTPTGFMPMSGSGVV------QRPGMGSM---XXXXXXXXXXXXXXXXXXXXXXXXX 601
P P P++ + +P + +
Sbjct: 1111 SPYAPPPPAQPLAANPYAPSTPPPMQPPLQQVPPPQSAGSRPSTASSVKKASPAPPKYPP 1170
Query: 602 XDTSNVPAHQKPVINTLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGDI 661
D S++PA +P+ L+ SRA + K +++D R++ LF LN+ D+
Sbjct: 1171 GDRSHIPAEARPIFEILSEDMQRVK-----SRAPSSFKAQVDDAERRLNFLFDHLNNEDL 1225
Query: 662 SK-NAADKLVQLCQALDNNDFGTALQIQVLLTTSDWDECNFWLATLKRMI 710
K N +VQL +A+ D+ TA I + + T+ DEC W+ +KR+I
Sbjct: 1226 LKPNTVQDMVQLARAIQARDYETARTIHIDIMTNRTDECGNWMVGVKRLI 1275
Score = 93 (37.8 bits), Expect = 1.1e-82, Sum P(3) = 1.1e-82
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 348 SNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSSAGHTSE 389
S+FS P +APKW +RP ++FGFGG++VS + G S+
Sbjct: 364 SSFSL-P-KAPKWLERPCSSTFGFGGRVVSVNLLEKGGRASK 403
Score = 90 (36.7 bits), Expect = 9.2e-72, Sum P(3) = 9.2e-72
Identities = 32/116 (27%), Positives = 43/116 (37%)
Query: 455 QPAPQPGLFIPPQ--------ATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQ 506
+P PQP + PP AT ++ PAPA P P PPV + Y
Sbjct: 819 KPLPQPAAYQPPTTFSAGARAATPTSYAPPAPAANPYAPPAAASNPYAPPVAAS-NPYAP 877
Query: 507 PTLGSQLY-PGVSNPGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMP 561
+ Y P + P P + A GS G P + + AP P+ G P
Sbjct: 878 TAAAANPYAPSAAAPSQSTNPYAPAGGSYAPAAGYQP--RQQSFGAPPPSVGGVPP 931
Score = 90 (36.7 bits), Expect = 9.2e-72, Sum P(3) = 9.2e-72
Identities = 35/127 (27%), Positives = 47/127 (37%)
Query: 435 YQQPLGPYSNGRGYGASAAYQP-APQPGLFIPPQATQPNFTAPAPAPVTSQP---AMRPF 490
YQ P +S G +Y P AP + PP A + P A P A P+
Sbjct: 827 YQPPT-TFSAGARAATPTSYAPPAPAANPYAPPAAASNPYAPPVAASNPYAPTAAAANPY 885
Query: 491 IPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQIGAVPGPKMPNVV 550
PS ++ Y P GS P GY P + G+ P +G VP P +
Sbjct: 886 APSAAAPSQSTNPYA-PAGGSYA-PAA---GYQ--PRQQSFGAPPPSVGGVPPPPRASSQ 938
Query: 551 APTPTPT 557
+P T
Sbjct: 939 SPATVTT 945
Score = 89 (36.4 bits), Expect = 1.2e-71, Sum P(3) = 1.2e-71
Identities = 36/111 (32%), Positives = 47/111 (42%)
Query: 425 SVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPA-PQ----PGLFIPPQATQPNFTAPAPA 479
S+P G+ N + P SN Y S A Q A PQ + PPQA + P PA
Sbjct: 1062 SIPRGSSPYNAPPTIPPPSNR--YAPSPAAQAASPQLQARAPVPPPPQAAASPYAPPPPA 1119
Query: 480 PVTSQP-AMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNP---GYPVPP 526
QP A P+ PSTPP ++ Q P + P ++ P PP
Sbjct: 1120 ----QPLAANPYAPSTPPPMQPPLQQVPPPQSAGSRPSTASSVKKASPAPP 1166
Score = 79 (32.9 bits), Expect = 2.9e-63, Sum P(2) = 2.9e-63
Identities = 56/242 (23%), Positives = 82/242 (33%)
Query: 348 SNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHP--KSSAGHTSENSQHAPVHGVDQSKYG 405
+N A P A Y P AS + + +P S+A + + +AP G G
Sbjct: 852 ANPYAPPAAASNPYAPPVAASNPYAPTAAAANPYAPSAAAPSQSTNPYAPAGGSYAPAAG 911
Query: 406 MVDSSQQYYQEPVQSPLHQSVPGGTYGDNYQQP--LGPYSNGRGYGA------SAAYQPA 457
Q + P P VP + Q P + Y+ + A A QP
Sbjct: 912 YQPRQQSFGAPP---PSVGGVPPPPRASS-QSPATVTTYTTAKNLPAWNDLPEGFAKQPV 967
Query: 458 PQ---PGLFIPPQATQPNFTAPA----PAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLG 510
+ P P + PN +PA P P + P P +P P + + P
Sbjct: 968 SRRGTPASSAPISSPFPN-QSPAVSQGPPPAGAGPQRTPSVPPPPKGVPPPPRMTSPPSA 1026
Query: 511 SQLYPGVSNPGYPVPPVSDARGSLPSQIGAVP-GPKMPNVVAPTPTPTGFMPMSGSGVVQ 569
Q P NP VPP + AVP P + ++ P P G P + +
Sbjct: 1027 GQAPP---NPLSAVPPPP------ANPYAAVPQSPSVGSMAPPASIPRGSSPYNAPPTIP 1077
Query: 570 RP 571
P
Sbjct: 1078 PP 1079
Score = 41 (19.5 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 420 SPLHQSV--PGGTYGDNYQQPLGPYSNGRGYGASAA 453
+P H S+ GG G+ Y L N G+S A
Sbjct: 129 NPRHSSLLATGGAKGELYISDLNDLENPYRLGSSTA 164
Score = 40 (19.1 bits), Expect = 3.8e-59, Sum P(2) = 3.8e-59
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 662 SKNAADKLVQLCQALDNNDFGTALQIQVLLTTSDWDECNFWL 703
S A + QALD DF Q Q +++ + WL
Sbjct: 334 STETAKAVADQNQALDGEDFFAKAQSQPQVSSFSLPKAPKWL 375
>UNIPROTKB|A4RD35 [details] [associations]
symbol:SEC31 "Protein transport protein SEC31"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0012507 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 EMBL:CM001235
GO:GO:0015031 eggNOG:COG2319 KO:K14005 InterPro:IPR009917
Pfam:PF07304 OrthoDB:EOG4RR9RS RefSeq:XP_003717826.1
ProteinModelPortal:A4RD35 STRING:A4RD35 EnsemblFungi:MGG_01108T0
GeneID:2674815 KEGG:mgr:MGG_01108 Uniprot:A4RD35
Length = 1269
Score = 616 (221.9 bits), Expect = 2.0e-82, Sum P(3) = 2.0e-82
Identities = 134/378 (35%), Positives = 208/378 (55%)
Query: 1 MACIKGINRSASVAFAPD--APYMAAGTMAGAVDLSFSSSANLEIF--KLDFQSEDRDLL 56
M ++ I R+A+ A++PD AP + GT AGAVD FS LE++ KLD + + +L
Sbjct: 1 MVRLREIPRTAAFAWSPDTSAPIVVTGTRAGAVDADFSDETKLELWDLKLDDEGQGLELQ 60
Query: 57 LVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLI 116
+ + RF +AWG +ED G++AG L +GS+D+W+ L+S
Sbjct: 61 PIASISADSRFFDIAWGPP---NEDHPRGIIAGALENGSLDLWDAEKLLSGASD------ 111
Query: 117 AHLSR---HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQ 173
AH+SR H G ++ L+FN P +LA+ GE+ I+D++ + P G +A
Sbjct: 112 AHMSRTTKHTGAIKSLQFNPLKPQILATAGTKGELFIYDVNDISNPFRL----GTAAARS 167
Query: 174 GEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQL 233
++ V+WN KV HILA+ G VWDLK +K ++ + S ++ S + W+P+ +T+L
Sbjct: 168 DDLECVAWNRKVPHILATGGSGGFVTVWDLKTRKASLTLNNS-RKAVSAIAWDPNNSTKL 226
Query: 234 VVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
+ A+ +D+ P + LWD+RN+ +P + GH +GV+++SWC DS L++C KDNRTI W+
Sbjct: 227 LTATPDDTMPVIFLWDLRNSNAPERTLQGHEQGVLSVSWCQQDSDLLISCGKDNRTIVWN 286
Query: 294 TVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGC--SRYGVGDSNFS 351
+GE E P TNW F + P P + + +SFDGKI I ++ S N
Sbjct: 287 PQTGERYGEFPEVTNWTFSARFNPTNPNLSATASFDGKITIQTLQNTNPSATQAAAQNSL 346
Query: 352 AAPLRAPKWYKRPAGASF 369
K +P GASF
Sbjct: 347 DGEDFFTKAQTQPQGASF 364
Score = 166 (63.5 bits), Expect = 2.0e-82, Sum P(3) = 2.0e-82
Identities = 71/274 (25%), Positives = 109/274 (39%)
Query: 447 GYGASAAYQPAPQPGLFI--PPQATQPNFTAPAPAPVTSQP-AMRPFIPSTPPVLRNAEQ 503
GYG +A +PA PP A +F AP T+ P ++ P P PP R A
Sbjct: 999 GYGGAAPPRPASAASSTYAPPPPAPGQSFGMNAPPARTASPYSVAPAAP--PPSNRYAPS 1056
Query: 504 --YQQPTLGSQLYPGVSNPGYPV---PPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTG 558
QQ G P S P P PP ++ + P Q A G P+ P G
Sbjct: 1057 PAMQQQQGGPG--PAGSMPPPPAMSRPPPTNPYAAAPQQSPAPGGQYAPSPYG-APPQAG 1113
Query: 559 FMPMSGSGVVQ-RPGMGSMXXXXXXXXXXXXXXXXXXXXXXXXXXDTSNVPAHQKPVINT 617
PM+ Q P G D S++PA + ++
Sbjct: 1114 QPPMAPPPSSQVGPPPGGRGPLSTPTPPPPRAAAAPPAKTKYPPGDRSHIPASAQQLVEI 1173
Query: 618 LTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGDISK-NAADKLVQLCQAL 676
L+R + S A P ++D +++ LF LN+ ++ K + +L L QA+
Sbjct: 1174 LSRDMERVAAKAPASFA-P----HVKDTQKRLNYLFDHLNNEELVKPDTIGQLNTLAQAI 1228
Query: 677 DNNDFGTALQIQVLLTTSDWDECNFWLATLKRMI 710
+ D+ A Q+Q+ + T +EC W+ +KR+I
Sbjct: 1229 EAKDYAGAQQLQIKIQTEKTEECGQWIVGVKRLI 1262
Score = 108 (43.1 bits), Expect = 2.0e-82, Sum P(3) = 2.0e-82
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 356 RAPKWYKRPAGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGMVDSSQQYYQ 415
+AP WY+RP GASFGFGGK+V F +A S+ + H S+ G S+ + ++
Sbjct: 368 KAPLWYQRPVGASFGFGGKVVVFKQTQTAPGQPRASEISISHFSVDSEIG---SATEKFE 424
Query: 416 EPVQS 420
E +++
Sbjct: 425 ESIKA 429
Score = 96 (38.9 bits), Expect = 4.3e-75, Sum P(3) = 4.3e-75
Identities = 42/131 (32%), Positives = 52/131 (39%)
Query: 432 GDNYQQPLGPYSNGRGYGASAAYQPAPQPG-LFIPPQATQPNFTAPAPA-PVTSQPAM-R 488
G ++ P Y + A AP P + P A Q P PA + PAM R
Sbjct: 1024 GQSFGMNAPPARTASPYSVAPA---APPPSNRYAPSPAMQQQQGGPGPAGSMPPPPAMSR 1080
Query: 489 PFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDARGSLP---SQIGAVPGPK 545
P P T P A Q P G Q P +P Y PP + P SQ+G PG +
Sbjct: 1081 P--PPTNPYA--AAPQQSPAPGGQYAP---SP-YGAPPQAGQPPMAPPPSSQVGPPPGGR 1132
Query: 546 MPNVVAPTPTP 556
P + PTP P
Sbjct: 1133 GP-LSTPTPPP 1142
Score = 87 (35.7 bits), Expect = 3.8e-74, Sum P(3) = 3.8e-74
Identities = 50/170 (29%), Positives = 65/170 (38%)
Query: 404 YGMVDSSQQYYQEPVQSPLHQSVPG--GTYGDN-YQQPLGPYSNGRGYGASAAYQPAPQP 460
YGM + Q Q P +P P G YQ Y+ + G + AY P P
Sbjct: 833 YGMPPAPQA--QTPAANPYGPPAPSPYAPAGATPYQPQQTSYAPPQPAGGAGAYGPTPGV 890
Query: 461 GLFIPPQATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQ-PTLGSQLYPGVSN 519
G P Q NF AP P P + P+ P PS +A + P + P S
Sbjct: 891 GYGQPQQ----NFGAPPP-PRNATPSALP--PSRTV---DAGSWNDVPMVTKAPPPRRST 940
Query: 520 PGY-PVP-PVSDARGSLPSQIGAVPGPKMPNV-VAPTPTPTGFMPMSGSG 566
P PVP P ++ Q G P P+ P + T TP P +G G
Sbjct: 941 PSVAPVPSPFAN------QQAGMAPPPQSPYLGQRGTATPPPPPPKAGQG 984
Score = 83 (34.3 bits), Expect = 1.0e-73, Sum P(3) = 1.0e-73
Identities = 37/114 (32%), Positives = 45/114 (39%)
Query: 450 ASAAYQPAPQPGLFIPPQATQPNFT--APAPAPVTSQPAMRPFIPSTP-PVL-RNAEQYQ 505
A+A QP + PPQ QP T PAP PA P+ P P P A YQ
Sbjct: 808 AAARLPTRQQPVGYQPPQQ-QPMSTPYGMPPAPQAQTPAANPYGPPAPSPYAPAGATPYQ 866
Query: 506 -QPTLGSQLYPGVSNPGY-PVPPVSDARGSLPSQIGAVPGPK--MPNVVAPTPT 555
Q T + P Y P P V G GA P P+ P+ + P+ T
Sbjct: 867 PQQTSYAPPQPAGGAGAYGPTPGVG--YGQPQQNFGAPPPPRNATPSALPPSRT 918
Score = 67 (28.6 bits), Expect = 4.8e-72, Sum P(3) = 4.8e-72
Identities = 28/98 (28%), Positives = 40/98 (40%)
Query: 465 PPQATQPNFTAPAPAPVTSQPA-MRPFIPSTPPVLRN---AEQYQQPTLGSQLYPGVSNP 520
PP+ + P+ AP P+P +Q A M P P P L A P Q P +++P
Sbjct: 935 PPRRSTPS-VAPVPSPFANQQAGMAP--PPQSPYLGQRGTATPPPPPPKAGQGPPRMASP 991
Query: 521 GYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTG 558
PP + G+ P + P + AP P G
Sbjct: 992 -LTSPPQAGYGGAAPPR----PASAASSTYAPPPPAPG 1024
Score = 64 (27.6 bits), Expect = 9.8e-72, Sum P(3) = 9.8e-72
Identities = 33/126 (26%), Positives = 41/126 (32%)
Query: 438 PLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQ--PNFTAPAPAPVTSQPAMRPFIPSTP 495
P PY RG A P P PP+A Q P +P +P Q P P
Sbjct: 961 PQSPYLGQRG----TATPPPP------PPKAGQGPPRMASPLTSP--PQAGYGGAAPPRP 1008
Query: 496 PVLRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPT 555
++ P Q + + P P S A + P P P M P
Sbjct: 1009 ASAASSTYAPPPPAPGQSFGMNAPPARTASPYSVAPAAPPPSNRYAPSPAMQQQQGG-PG 1067
Query: 556 PTGFMP 561
P G MP
Sbjct: 1068 PAGSMP 1073
Score = 40 (19.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 156 PAEPSHFPPLRGNGSAAQGEISFVSWNSKVQH 187
P + S+ PP G+ A G V + Q+
Sbjct: 867 PQQTSYAPPQPAGGAGAYGPTPGVGYGQPQQN 898
>ZFIN|ZDB-GENE-020919-2 [details] [associations]
symbol:sec31a "sec31 homolog A (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0001889 "liver development"
evidence=IMP] [GO:0007029 "endoplasmic reticulum organization"
evidence=IMP] [GO:0055123 "digestive system development"
evidence=IMP] [GO:0030134 "ER to Golgi transport vesicle"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-020919-2 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 GO:GO:0001889 GO:GO:0007029 GO:GO:0055123
GO:GO:0030134 CTD:22872 eggNOG:NOG248389 HOGENOM:HOG000230582
HOVERGEN:HBG055626 KO:K14005 OrthoDB:EOG4WDDB3 EMBL:BC054909
IPI:IPI00496799 RefSeq:NP_955824.1 UniGene:Dr.19511
ProteinModelPortal:Q7SYD5 STRING:Q7SYD5 PRIDE:Q7SYD5 GeneID:266638
KEGG:dre:266638 InParanoid:Q7SYD5 NextBio:20804816
ArrayExpress:Q7SYD5 Uniprot:Q7SYD5
Length = 1254
Score = 704 (252.9 bits), Expect = 1.0e-80, Sum P(3) = 1.0e-80
Identities = 147/343 (42%), Positives = 217/343 (63%)
Query: 4 IKGINRSASVAFAP--DAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
+K INR+A A++P P Y+AAGT A +D +FS++A+LEIF+LD + G
Sbjct: 3 LKEINRTAIQAWSPAQQHPIYLAAGTSAQQLDATFSTNASLEIFELDLADSALAMKSCGS 62
Query: 61 SPSSERFNRLAWGKNGSGSEDFSLG-LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL 119
S R+++L WG +G ++ G L+AGG +G+I +++ +I+ G++ +I+
Sbjct: 63 FSSPHRYHKLVWGPHGIENQGLPSGVLIAGG-ENGNIILYDASKIIA-GDS--EVIISQS 118
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
+H G VR L+ NSF NL+ASG ++ EI IWDL+ + P P G + Q +IS V
Sbjct: 119 EKHTGAVRALDVNSFQSNLVASGGNESEIYIWDLNNFSSP--MTP--GPKTQPQEDISCV 174
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVASD 238
+WN +VQHILAS S +G VWDL+K +I S+ R CS L WNP+VATQLV+AS+
Sbjct: 175 AWNKQVQHILASASPSGKASVWDLRKNDLIIKVSDHSNRMHCSGLAWNPEVATQLVLASE 234
Query: 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298
+D P +++WD+R SP+K HT+G++A++W D LL+C KDNR +CW+ + E
Sbjct: 235 DDRMPVIQMWDLRFATSPLKVLENHTRGILAIAWSVADPELLLSCGKDNRILCWNPNTAE 294
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341
++ ELP T W FDI W P+ P V+SA++FDG I IY+I G S
Sbjct: 295 VLYELPTSTQWCFDIQWCPRNPAVLSAAAFDGHISIYSIMGGS 337
Score = 146 (56.5 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 67/277 (24%), Positives = 121/277 (43%)
Query: 131 FNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKV--QHI 188
+N ++LAS + G+ +WDL + ++ + + + S ++WN +V Q +
Sbjct: 176 WNKQVQHILASASPSGKASVWDLR-----KNDLIIKVSDHSNRMHCSGLAWNPEVATQLV 230
Query: 189 LASTSYNGTTV-VWDLKKQKPVISFSESIKRRCSVLQWNPDVAT-QLVVASDEDSSPALR 246
LAS + +WDL+ + E+ R + W+ VA +L+++ +D+ +
Sbjct: 231 LASEDDRMPVIQMWDLRFATSPLKVLENHTRGILAIAWS--VADPELLLSCGKDNR--IL 286
Query: 247 LWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAG 306
W+ NT + E T+ + WCP + + L A D +S + + G
Sbjct: 287 CWNP-NTAEVLYELPTSTQWCFDIQWCPRNPAVLSAAAFDGH------IS---IYSIMGG 336
Query: 307 TNWNFDIHWYPKIPGVISASSFDGKIGIYN----IEGCSRYGVGDSNFSAAPLRAP-KWY 361
+N N + + +SSF G + + + + PL+ P KW
Sbjct: 337 SNDNAN-----NLQADQLSSSF-GNVDPFGTGKTLPPLQLPQQTSPQSTITPLKKPPKWI 390
Query: 362 KRPAGASFGFGGKLVSF-HPKSSAGHTSENSQHAPVH 397
+RP GASF FGGKLV+ + K +A + + H VH
Sbjct: 391 RRPVGASFAFGGKLVTLDNIKPTAQQPQQTAAHV-VH 426
Score = 89 (36.4 bits), Expect = 1.0e-80, Sum P(3) = 1.0e-80
Identities = 51/179 (28%), Positives = 68/179 (37%)
Query: 411 QQYYQ-EPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQAT 469
Q Y Q +P Q P + P YQQ + + P+ P +P
Sbjct: 820 QTYTQPQPPQVPAQPAAPA-VPPQYYQQGRSATTVTSWSNQTPTALPSV-PRQLVPSSDP 877
Query: 470 QPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPG-Y-PVPPV 527
Q + T PA PAM +P++ P + + +QYQ Q P PG Y P+P
Sbjct: 878 QGDSTPPAFG--LQSPAMAS-VPASTPFMYS-QQYQNYPPVQQFTPSAGTPGIYQPLPYA 933
Query: 528 SDARGSLP-----SQIGAVPGPKM---PNVVAPTPTPTGFMP---MSGSGVVQRPGMGS 575
S A LP S AV P+ + A P P F P +S G Q G GS
Sbjct: 934 SSAGAPLPPPPSSSSSAAVYPPQFMLSASSQASAP-PQSFCPPPAVSSGGCFQHGGPGS 991
Score = 77 (32.2 bits), Expect = 1.9e-79, Sum P(3) = 1.9e-79
Identities = 29/93 (31%), Positives = 38/93 (40%)
Query: 465 PPQATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYP- 523
P +T P P V +QPA P +P P + T S P + P P
Sbjct: 814 PAAVPMQTYTQPQPPQVPAQPAA-PAVP--PQYYQQGRSATTVTSWSNQTP-TALPSVPR 869
Query: 524 -VPPVSDARG-SLPSQIGAVPGPKMPNVVAPTP 554
+ P SD +G S P G + P M +V A TP
Sbjct: 870 QLVPSSDPQGDSTPPAFG-LQSPAMASVPASTP 901
Score = 76 (31.8 bits), Expect = 1.0e-80, Sum P(3) = 1.0e-80
Identities = 18/83 (21%), Positives = 44/83 (53%)
Query: 634 ANPAKKREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDFGTALQIQV-LLT 692
++P KR+++D +++ L+ KL +S L + Q+++ + L I +++
Sbjct: 1169 SDPQTKRKLDDAHKRLELLYDKLREQTLSPAIIGGLHNMAQSIECRSYADGLNIHTHIVS 1228
Query: 693 TSDWDECNFWLATLKRMIKTRQN 715
S++ E + ++ LK ++ T+ N
Sbjct: 1229 NSNFSETSAFMPVLK-VVLTQAN 1250
Score = 56 (24.8 bits), Expect = 3.0e-77, Sum P(3) = 3.0e-77
Identities = 19/65 (29%), Positives = 23/65 (35%)
Query: 416 EPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTA 475
+P Q QS T+ QQPLGP + G AP + P QA
Sbjct: 1083 QPQQQVPDQSAGPATFTPIQQQPLGPRNPSMPQGNMEGAPGAPIGDVIKPLQAIPTEKIT 1142
Query: 476 PAPAP 480
P P
Sbjct: 1143 KKPIP 1147
Score = 42 (19.8 bits), Expect = 8.9e-76, Sum P(3) = 8.9e-76
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 527 VSDARGSLPSQIGAVPGPKM 546
V A+G++P+ +GA+ KM
Sbjct: 731 VEKAQGAVPADMGALLAEKM 750
Score = 39 (18.8 bits), Expect = 1.8e-75, Sum P(3) = 1.8e-75
Identities = 34/136 (25%), Positives = 47/136 (34%)
Query: 346 GDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKS----SAGHTS--ENSQHAPVHGV 399
GDS A L++P PA F + + ++ P SAG + +A G
Sbjct: 879 GDSTPPAFGLQSPAMASVPASTPFMYSQQYQNYPPVQQFTPSAGTPGIYQPLPYASSAGA 938
Query: 400 DQSKYGMVDSSQQYYQEPVQSPLHQSVPGGTYGDNYQQPLGPYSNG----RGYGASAAYQ 455
SS Y P Q L S ++ P S G G G+ +Y
Sbjct: 939 PLPPPPSSSSSAAVY--PPQFMLSASSQASAPPQSFCPPPAVSSGGCFQHGGPGSPTSYL 996
Query: 456 PAPQPGLFIPPQATQP 471
P P PG P +P
Sbjct: 997 P-P-PGARAPGTQHEP 1010
>UNIPROTKB|D6RHZ5 [details] [associations]
symbol:SEC31A "Protein transport protein Sec31A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043231 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:AC021105 HOGENOM:HOG000230582 EMBL:AC108469
IPI:IPI00853290 HGNC:HGNC:17052 ChiTaRS:SEC31A
ProteinModelPortal:D6RHZ5 SMR:D6RHZ5 Ensembl:ENST00000508479
UCSC:uc003hnn.2 ArrayExpress:D6RHZ5 Bgee:D6RHZ5 Uniprot:D6RHZ5
Length = 877
Score = 694 (249.4 bits), Expect = 1.0e-80, Sum P(3) = 1.0e-80
Identities = 144/347 (41%), Positives = 219/347 (63%)
Query: 4 IKGINRSASVAFAP--DAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
+K ++R+A A++P + P Y+A GT A +D +FS++A+LEIF+LD D+
Sbjct: 3 LKEVDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTNASLEIFELDLSDPSLDMKSCAT 62
Query: 61 SPSSERFNRLAWGKNGSGSE-DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL 119
SS R+++L WG S+ D S L+AGG +G+I +++P +I+ + +IA
Sbjct: 63 FSSSHRYHKLIWGPYKMDSKGDVSGVLIAGG-ENGNIILYDPSKIIAGDK---EVVIAQN 118
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
+H GPVR L+ N F NL+ASGA++ EI IWDL+ A P P G + +IS +
Sbjct: 119 DKHTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFATP--MTP--GAKTQPPEDISCI 174
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVASD 238
+WN +VQHILAS S +G VWDL+K +P+I S+ R CS L W+PDVATQ+V+AS+
Sbjct: 175 AWNRQVQHILASASPSGRATVWDLRKNEPIIKVSDHSNRMHCSGLAWHPDVATQMVLASE 234
Query: 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298
+D P +++WD+R SP++ H +G++A++W D LL+C KD + +C + +GE
Sbjct: 235 DDRLPVIQMWDLRFASSPLRVLENHARGILAIAWSMADPELLLSCGKDAKILCSNPNTGE 294
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345
++ ELP T W FDI W P+ P V+SA+SFDG+I +Y+I G S G+
Sbjct: 295 VLYELPTNTQWCFDIQWCPRNPAVLSAASFDGRISVYSIMGGSTDGL 341
Score = 107 (42.7 bits), Expect = 1.0e-80, Sum P(3) = 1.0e-80
Identities = 28/72 (38%), Positives = 35/72 (48%)
Query: 354 PLRAP-KWYKRPAGASFGFGGKLVSFH----PKSSAGHTSENSQHAPVHGVDQSKYGMVD 408
PL+ P KW +RP GASF FGGKLV+F P + H + V K +
Sbjct: 382 PLKKPPKWIRRPVGASFSFGGKLVTFENVRMPSHQGAEQQQQQHHVFISQVVTEKEFLSR 441
Query: 409 SSQQYYQEPVQS 420
S Q Q+ VQS
Sbjct: 442 SDQ--LQQAVQS 451
Score = 41 (19.5 bits), Expect = 1.0e-80, Sum P(3) = 1.0e-80
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 668 KLVQLCQALDNNDFGTAL 685
K VQL QA+D + G L
Sbjct: 729 KAVQLTQAMDTSTVGVLL 746
Score = 40 (19.1 bits), Expect = 1.1e-73, Sum P(3) = 1.1e-73
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 458 PQPGLFIPPQATQPNFTAPAPAP 480
P P L IP Q Q + P P
Sbjct: 364 PLPPLQIPQQTAQHSIVLPLKKP 386
Score = 37 (18.1 bits), Expect = 2.8e-80, Sum P(3) = 2.8e-80
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 643 EDNSRKIGALFAKLNSGDISKNAADKLVQ 671
ED +KI K++ +++ +D++ Q
Sbjct: 498 EDLGKKIALALNKVDGANVALKDSDQVAQ 526
>FB|FBgn0033339 [details] [associations]
symbol:sec31 "sec31" species:7227 "Drosophila melanogaster"
[GO:0008021 "synaptic vesicle" evidence=ISS] [GO:0030134 "ER to
Golgi transport vesicle" evidence=TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005795 "Golgi stack" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE013599 GO:GO:0005783 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005795 GO:GO:0030134 eggNOG:NOG248389 KO:K14005
GeneTree:ENSGT00390000003175 OMA:PSASNAY RefSeq:NP_724716.1
UniGene:Dm.30896 ProteinModelPortal:A1Z7J6 SMR:A1Z7J6 STRING:A1Z7J6
PaxDb:A1Z7J6 PRIDE:A1Z7J6 EnsemblMetazoa:FBtr0088643 GeneID:35877
KEGG:dme:Dmel_CG8266 UCSC:CG8266-RB CTD:35877 FlyBase:FBgn0033339
InParanoid:A1Z7J6 OrthoDB:EOG44QRFZ PhylomeDB:A1Z7J6
GenomeRNAi:35877 NextBio:795601 Bgee:A1Z7J6 Uniprot:A1Z7J6
Length = 1241
Score = 575 (207.5 bits), Expect = 2.1e-78, Sum P(4) = 2.1e-78
Identities = 125/353 (35%), Positives = 200/353 (56%)
Query: 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSAN--LEIFKLDFQSEDRDLLLVGES 61
IK + ++ ++A++P A AG F S+AN LE++ +F DL L
Sbjct: 3 IKELQKTVNIAWSP-AQQQQILLAAGTAAQQFDSNANSTLELYSPNFSDATYDLELRASV 61
Query: 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR 121
S +F +L W G GL+ GG G I+I++ L++ E PL+ +
Sbjct: 62 SSQYKFQKLIWSPVGPHPS----GLIVGGCEAGQINIYSADKLLAGKE---EPLLKRQDK 114
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H G V GL+FN F NLLAS A + EI IWDL+ P E S P G + ++ V+W
Sbjct: 115 HTGAVSGLDFNPFQNNLLASCASESEILIWDLNNP-ETSMSP---GTKTQPLEDVKNVAW 170
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVASDED 240
N +VQHILAS ++ V+WDL+K + +I S+S R R ++W+P+ ATQ+ +AS++D
Sbjct: 171 NRQVQHILASV-FSTRCVIWDLRKSQQIIKLSDSQSRVRWHAIEWHPEAATQVWLASEDD 229
Query: 241 SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS---- 296
+P ++LWD+R +P K + H +GV+ MSWC D+ +++C KDNR CW+ +
Sbjct: 230 QAPVVQLWDLRYATAPAKTYQIHERGVLGMSWCLQDNDLMVSCGKDNRIYCWNPNTKIPE 289
Query: 297 GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSN 349
GEI+SE+ +W D+ + P+ P +I+++S +G + IY++ G + + V +N
Sbjct: 290 GEILSEVATTASWYSDVQFCPRNPALIASASLEGAVSIYSLHGGTHHLVQTAN 342
Score = 112 (44.5 bits), Expect = 2.1e-78, Sum P(4) = 2.1e-78
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 357 APKWYKRPAGASFGFGGKLVSFHPKSSAGHTSE-NSQHAPVHGVDQSKYGMVDSSQQYY 414
APKW KRP G +FGFGGKLVSF+ S + ++ A V + + +VD++ Y
Sbjct: 374 APKWMKRPCGVAFGFGGKLVSFNGTSKTVKVQQLTTESALVDRANALERSLVDANYSDY 432
Score = 101 (40.6 bits), Expect = 2.1e-78, Sum P(4) = 2.1e-78
Identities = 45/146 (30%), Positives = 58/146 (39%)
Query: 438 PLGPYSNGRGYGASAAYQP-APQPGLFIPPQATQPNFTAPAPAPVTSQPAMRPFIPSTPP 496
P G Y RG G+ + QP AP P P Q QP++ A P TS P + P PP
Sbjct: 791 PHG-YQPTRGRGSFSQPQPSAPMPYGQPPNQYAQPSWPAQVPPLQTSYPGAQQ--PQAPP 847
Query: 497 VLRNAEQYQQPTLGSQLYP--GVSNPGYPVPPVSDARGSLPSQIG---------AVPGPK 545
+ N + + L P S+ G P PP A S S + +V P
Sbjct: 848 QIFNPQPVKPEPLAQPPRPLSNASSSGGP-PPAGGASSSGGSGLSGRSKYVLDPSVAAPT 906
Query: 546 ----MPNVVAPTPTPTGFMPMSGSGV 567
MP P P P+ +P G GV
Sbjct: 907 SSYGMPYNPVPAPVPSA-VPFGGGGV 931
Score = 84 (34.6 bits), Expect = 2.1e-78, Sum P(4) = 2.1e-78
Identities = 24/116 (20%), Positives = 54/116 (46%)
Query: 608 PAHQKPVINT----LTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGDISK 663
P +KP + L + E G+ +P KR+ D +++ L+ L G ++
Sbjct: 1123 PPKEKPPLPEEYIYLQTVLEELKNRCLGATNDPRTKRKFVDVVKRLENLYDCLRDGKLTP 1182
Query: 664 NAADKLVQLCQALDNNDFGTALQIQVLLTT-SDWDECNFWLATLKRMIKTRQNVRL 718
L Q+ Q + +D+ A++I + +D+ +C ++ LK ++++ ++L
Sbjct: 1183 TTVQYLNQIVQYIQISDYANAMEIHTQIAFGTDFAQCAGFMQGLKVLLQSASELQL 1238
Score = 84 (34.6 bits), Expect = 6.1e-67, Sum P(3) = 6.1e-67
Identities = 42/195 (21%), Positives = 64/195 (32%)
Query: 380 PKSSAGHTSENSQHAPVHGVDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGTYGDNYQQPL 439
P + S + P G S + +Y +P + P +YG Y
Sbjct: 863 PPRPLSNASSSGGPPPAGGASSSGGSGLSGRSKYVLDP-----SVAAPTSSYGMPYNPVP 917
Query: 440 GPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAPAPA--PVTSQPAM----RPFIPS 493
P + +G PAPQP +P + T P A P P M F+P
Sbjct: 918 APVPSAVPFGGGGVPGPAPQPAS-VPTYNSNAFNTNPIAAAQPYNPSPLMPAQQNQFVPG 976
Query: 494 TPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVPP-VSDARGSLPSQI----GAVPGPKMPN 548
P+ P + + PG+ PP + +R P + A+ P P
Sbjct: 977 VNPIETMPPPAVPPVIQNVQRNPTPPPGWNDPPALKSSRAPKPKPVVEPSAAIFHPLFP- 1035
Query: 549 VVAPTPTPTGFMPMS 563
V P G++ S
Sbjct: 1036 -VDPNQNQNGYVDPS 1049
Score = 79 (32.9 bits), Expect = 4.2e-76, Sum P(4) = 4.2e-76
Identities = 39/143 (27%), Positives = 48/143 (33%)
Query: 426 VPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAPAPAPVTSQP 485
+P G + Y QP P + +Y A QP PPQ P P P +P
Sbjct: 812 MPYGQPPNQYAQPSWP---AQVPPLQTSYPGAQQPQA--PPQIFNPQPVKPEPLAQPPRP 866
Query: 486 AMRPFIPSTPPVLRNAEQYQQPTL-GSQLY---PGVSNP----GYPVPPV-SDARGSLPS 536
PP A L G Y P V+ P G P PV + ++P
Sbjct: 867 LSNASSSGGPPPAGGASSSGGSGLSGRSKYVLDPSVAAPTSSYGMPYNPVPAPVPSAVPF 926
Query: 537 QIGAVPGPKMPNVVAPTPTPTGF 559
G VPGP PT F
Sbjct: 927 GGGGVPGPAPQPASVPTYNSNAF 949
Score = 65 (27.9 bits), Expect = 6.0e-65, Sum P(3) = 6.0e-65
Identities = 33/133 (24%), Positives = 45/133 (33%)
Query: 395 PVHGVDQSKYGMVDSSQQYYQEPVQ-SPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAA 453
P + + + ++Q Y P+ + +Q VPG + P P +
Sbjct: 942 PTYNSNAFNTNPIAAAQPYNPSPLMPAQQNQFVPGVNPIETMPPPAVP-----PVIQNVQ 996
Query: 454 YQPAPQPGLFIPPQATQPNFTAPAPAPVTSQPA--MRPFIPSTPPVLRNAEQYQQPTLGS 511
P P PG PP AP P PV A P P P +N Y P+
Sbjct: 997 RNPTPPPGWNDPPALKSSR--APKPKPVVEPSAAIFHPLFPVDPN--QNQNGYVDPSQYQ 1052
Query: 512 QLYP--GVSNPGY 522
P GV N Y
Sbjct: 1053 HAAPLGGVPNTYY 1065
Score = 58 (25.5 bits), Expect = 3.2e-64, Sum P(3) = 3.2e-64
Identities = 33/120 (27%), Positives = 46/120 (38%)
Query: 395 PVHGVD--QSKYGMVDSSQQYYQEPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASA 452
P+ VD Q++ G VD SQ + P+ + + +N QQ + + Y
Sbjct: 1032 PLFPVDPNQNQNGYVDPSQYQHAAPLGGVPNTYYNPAAFNNNPQQQ---QQHQQSY---- 1084
Query: 453 AYQPA-PQPGLFIPP-QATQPNFT-APAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTL 509
QP P PG+ P Q Q PAP+ Q +P P P L Y Q L
Sbjct: 1085 -LQPQQPAPGIQQPNWQGQQQTIGYTEQPAPIQQQ--RQPAPPKEKPPLPEEYIYLQTVL 1141
Score = 37 (18.1 bits), Expect = 1.0e-71, Sum P(4) = 1.0e-71
Identities = 14/45 (31%), Positives = 17/45 (37%)
Query: 528 SDARGSLPSQIG-AVPGPKMPNVVAPTPTPTGFMPMSGSGVVQRP 571
SD SL +I AV A P G+ P G G +P
Sbjct: 762 SDVLQSLRDRINNAVNLDYTQPQAAVAAAPHGYQPTRGRGSFSQP 806
>UNIPROTKB|O94979 [details] [associations]
symbol:SEC31A "Protein transport protein Sec31A"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS;TAS] [GO:0030127 "COPII vesicle coat" evidence=NAS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0048306 "calcium-dependent protein
binding" evidence=IPI] [GO:0051592 "response to calcium ion"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030134 "ER to Golgi transport vesicle" evidence=IDA]
[GO:0044432 "endoplasmic reticulum part" evidence=IDA] [GO:0002474
"antigen processing and presentation of peptide antigen via MHC
class I" evidence=TAS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006987
"activation of signaling protein activity involved in unfolded
protein response" evidence=TAS] [GO:0012507 "ER to Golgi transport
vesicle membrane" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=TAS] [GO:0043687 "post-translational
protein modification" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] [GO:0048208 "COPII vesicle
coating" evidence=TAS] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] Reactome:REACT_11123 Reactome:REACT_17015
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0048471 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0002474 GO:GO:0006987 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0019886 GO:GO:0005789
GO:GO:0051592 GO:GO:0015031 GO:GO:0005768 EMBL:CH471057
GO:GO:0043687 GO:GO:0018279 GO:GO:0030127 GO:GO:0048208
EMBL:AC021105 CTD:22872 eggNOG:NOG248389 HOVERGEN:HBG055626
KO:K14005 OrthoDB:EOG4WDDB3 EMBL:AF139184 EMBL:AB018358
EMBL:AB018359 EMBL:AB020712 EMBL:AK125897 EMBL:AK295810
EMBL:AL049463 EMBL:CR933696 EMBL:AC108469 EMBL:BC047883
EMBL:BC084583 EMBL:BC117221 EMBL:BC143489 EMBL:BC143491
EMBL:AY137583 EMBL:AF161393 EMBL:AF161452 IPI:IPI00305152
IPI:IPI00445429 IPI:IPI00515103 IPI:IPI00746182 IPI:IPI00795507
IPI:IPI00853220 IPI:IPI00853290 IPI:IPI00965105 IPI:IPI00966405
RefSeq:NP_001070674.1 RefSeq:NP_001070675.1 RefSeq:NP_001070676.1
RefSeq:NP_001177978.1 RefSeq:NP_055748.2 RefSeq:NP_057295.2
UniGene:Hs.370024 ProteinModelPortal:O94979 SMR:O94979
DIP:DIP-40438N IntAct:O94979 STRING:O94979 PhosphoSite:O94979
PaxDb:O94979 PRIDE:O94979 Ensembl:ENST00000311785
Ensembl:ENST00000326950 Ensembl:ENST00000348405
Ensembl:ENST00000355196 Ensembl:ENST00000395310
Ensembl:ENST00000432794 Ensembl:ENST00000443462
Ensembl:ENST00000448323 Ensembl:ENST00000500777
Ensembl:ENST00000508502 Ensembl:ENST00000509142
Ensembl:ENST00000513858 GeneID:22872 KEGG:hsa:22872 UCSC:uc003hne.3
UCSC:uc003hnf.3 UCSC:uc003hng.3 UCSC:uc003hni.3 UCSC:uc003hnk.3
UCSC:uc003hnl.3 UCSC:uc003hno.3 GeneCards:GC04M083739
HGNC:HGNC:17052 HPA:HPA005457 MIM:610257 neXtProt:NX_O94979
PharmGKB:PA162402737 InParanoid:O94979 PhylomeDB:O94979
ChiTaRS:SEC31A GenomeRNAi:22872 NextBio:43407 ArrayExpress:O94979
Bgee:O94979 Genevestigator:O94979 Uniprot:O94979
Length = 1220
Score = 694 (249.4 bits), Expect = 5.8e-78, Sum P(3) = 5.8e-78
Identities = 144/347 (41%), Positives = 219/347 (63%)
Query: 4 IKGINRSASVAFAP--DAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
+K ++R+A A++P + P Y+A GT A +D +FS++A+LEIF+LD D+
Sbjct: 3 LKEVDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTNASLEIFELDLSDPSLDMKSCAT 62
Query: 61 SPSSERFNRLAWGKNGSGSE-DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL 119
SS R+++L WG S+ D S L+AGG +G+I +++P +I+ + +IA
Sbjct: 63 FSSSHRYHKLIWGPYKMDSKGDVSGVLIAGG-ENGNIILYDPSKIIAGDK---EVVIAQN 118
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
+H GPVR L+ N F NL+ASGA++ EI IWDL+ A P P G + +IS +
Sbjct: 119 DKHTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFATP--MTP--GAKTQPPEDISCI 174
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVASD 238
+WN +VQHILAS S +G VWDL+K +P+I S+ R CS L W+PDVATQ+V+AS+
Sbjct: 175 AWNRQVQHILASASPSGRATVWDLRKNEPIIKVSDHSNRMHCSGLAWHPDVATQMVLASE 234
Query: 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298
+D P +++WD+R SP++ H +G++A++W D LL+C KD + +C + +GE
Sbjct: 235 DDRLPVIQMWDLRFASSPLRVLENHARGILAIAWSMADPELLLSCGKDAKILCSNPNTGE 294
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345
++ ELP T W FDI W P+ P V+SA+SFDG+I +Y+I G S G+
Sbjct: 295 VLYELPTNTQWCFDIQWCPRNPAVLSAASFDGRISVYSIMGGSTDGL 341
Score = 125 (49.1 bits), Expect = 8.3e-78, Sum P(2) = 8.3e-78
Identities = 76/378 (20%), Positives = 138/378 (36%)
Query: 346 GDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYG 405
G + P P+ Y+ FG GG + + P+ + N+ + S Y
Sbjct: 862 GHMHTQVPPYPQPQPYQPAQPYPFGTGGSAM-YRPQQPVAPPTSNAYPNTPYISSASSY- 919
Query: 406 MVDSSQQYY-QEPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFI 464
SQ Y Q SP S P ++ P P S+G + P +
Sbjct: 920 -TGQSQLYAAQHQASSPT--SSPATSF-----PP--PPSSGASFQHGGPGAPPSSSAYAL 969
Query: 465 PPQATQPNFTAPAPAPVTSQPAMRPFIP-STPPVLRNAEQYQQPTLGSQLYPGVSNPGYP 523
PP T T PA + + + P + PP L + ++ + P V
Sbjct: 970 PPGTTG---TLPAASELPASQRTGPQNGWNDPPALNRVPKKKK--MPENFMPPVPITSPI 1024
Query: 524 VPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVVQRP-GMGSMXXXXXX 582
+ P+ D + + Q + P P P P G P G VQ+P G M
Sbjct: 1025 MNPLGDPQSQMLQQQPSAPVPLSSQSSFPQPHLPGGQPFHG---VQQPLGQTGMPPSFSK 1081
Query: 583 XXXXXXXXX-XXXXXXXXXXXDTSNVPAHQKPVINT---LTRLFNETSEALGGSRANPAK 638
T + +KP+ + L F + + S +P
Sbjct: 1082 PNIEGAPGAPIGNTFQHVQSLPTKKIT--KKPIPDEHLILKTTFEDLIQRCLSSATDPQT 1139
Query: 639 KREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDFGTALQIQV-LLTTSDWD 697
KR+++D S+++ L+ KL +S L + ++++ ++ L + +++TS++
Sbjct: 1140 KRKLDDASKRLEFLYDKLREQTLSPTITSGLHNIARSIETRNYSEGLTMHTHIVSTSNFS 1199
Query: 698 ECNFWLATLKRMIKTRQN 715
E + ++ LK ++ T+ N
Sbjct: 1200 ETSAFMPVLK-VVLTQAN 1216
Score = 107 (42.7 bits), Expect = 5.8e-78, Sum P(3) = 5.8e-78
Identities = 28/72 (38%), Positives = 35/72 (48%)
Query: 354 PLRAP-KWYKRPAGASFGFGGKLVSFH----PKSSAGHTSENSQHAPVHGVDQSKYGMVD 408
PL+ P KW +RP GASF FGGKLV+F P + H + V K +
Sbjct: 382 PLKKPPKWIRRPVGASFSFGGKLVTFENVRMPSHQGAEQQQQQHHVFISQVVTEKEFLSR 441
Query: 409 SSQQYYQEPVQS 420
S Q Q+ VQS
Sbjct: 442 SDQ--LQQAVQS 451
Score = 64 (27.6 bits), Expect = 2.2e-71, Sum P(2) = 2.2e-71
Identities = 41/183 (22%), Positives = 65/183 (35%)
Query: 316 YPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKL 375
YP P + SASS+ G+ +Y +++ S A P +GASF GG
Sbjct: 907 YPNTPYISSASSYTGQSQLY----AAQHQASSPTSSPATSFPPP---PSSGASFQHGGPG 959
Query: 376 VSFHPKSSAGHTSENSQHAPVHGVDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGT-YGDN 434
P SS+ + + + Q + +P P VP +N
Sbjct: 960 A---PPSSSAYALPPGTTGTLPAASELPASQRTGPQNGWNDP---PALNRVPKKKKMPEN 1013
Query: 435 YQQPL---GPYSNGRGYGASAAYQPAPQPGLFIPPQAT--QPNFTAPAPAPVTSQPAMRP 489
+ P+ P N G S Q P + + Q++ QP+ P QP +
Sbjct: 1014 FMPPVPITSPIMNPLGDPQSQMLQQQPSAPVPLSSQSSFPQPHLPGGQPFHGVQQPLGQT 1073
Query: 490 FIP 492
+P
Sbjct: 1074 GMP 1076
Score = 41 (19.5 bits), Expect = 5.8e-78, Sum P(3) = 5.8e-78
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 668 KLVQLCQALDNNDFGTAL 685
K VQL QA+D + G L
Sbjct: 729 KAVQLTQAMDTSTVGVLL 746
Score = 40 (19.1 bits), Expect = 6.1e-71, Sum P(3) = 6.1e-71
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 458 PQPGLFIPPQATQPNFTAPAPAP 480
P P L IP Q Q + P P
Sbjct: 364 PLPPLQIPQQTAQHSIVLPLKKP 386
Score = 37 (18.1 bits), Expect = 1.5e-77, Sum P(3) = 1.5e-77
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 643 EDNSRKIGALFAKLNSGDISKNAADKLVQ 671
ED +KI K++ +++ +D++ Q
Sbjct: 498 EDLGKKIALALNKVDGANVALKDSDQVAQ 526
>UNIPROTKB|D6REX3 [details] [associations]
symbol:SEC31A "Protein transport protein Sec31A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043231 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:AC021105 HOGENOM:HOG000230582 EMBL:AC108469
IPI:IPI00965105 HGNC:HGNC:17052 ChiTaRS:SEC31A OMA:PSASNAY
ProteinModelPortal:D6REX3 SMR:D6REX3 Ensembl:ENST00000505472
ArrayExpress:D6REX3 Bgee:D6REX3 Uniprot:D6REX3
Length = 1251
Score = 694 (249.4 bits), Expect = 7.9e-78, Sum P(3) = 7.9e-78
Identities = 144/347 (41%), Positives = 219/347 (63%)
Query: 4 IKGINRSASVAFAP--DAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
+K ++R+A A++P + P Y+A GT A +D +FS++A+LEIF+LD D+
Sbjct: 3 LKEVDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTNASLEIFELDLSDPSLDMKSCAT 62
Query: 61 SPSSERFNRLAWGKNGSGSE-DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL 119
SS R+++L WG S+ D S L+AGG +G+I +++P +I+ + +IA
Sbjct: 63 FSSSHRYHKLIWGPYKMDSKGDVSGVLIAGG-ENGNIILYDPSKIIAGDK---EVVIAQN 118
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
+H GPVR L+ N F NL+ASGA++ EI IWDL+ A P P G + +IS +
Sbjct: 119 DKHTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFATP--MTP--GAKTQPPEDISCI 174
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVASD 238
+WN +VQHILAS S +G VWDL+K +P+I S+ R CS L W+PDVATQ+V+AS+
Sbjct: 175 AWNRQVQHILASASPSGRATVWDLRKNEPIIKVSDHSNRMHCSGLAWHPDVATQMVLASE 234
Query: 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298
+D P +++WD+R SP++ H +G++A++W D LL+C KD + +C + +GE
Sbjct: 235 DDRLPVIQMWDLRFASSPLRVLENHARGILAIAWSMADPELLLSCGKDAKILCSNPNTGE 294
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345
++ ELP T W FDI W P+ P V+SA+SFDG+I +Y+I G S G+
Sbjct: 295 VLYELPTNTQWCFDIQWCPRNPAVLSAASFDGRISVYSIMGGSTDGL 341
Score = 125 (49.1 bits), Expect = 1.0e-77, Sum P(2) = 1.0e-77
Identities = 76/378 (20%), Positives = 138/378 (36%)
Query: 346 GDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYG 405
G + P P+ Y+ FG GG + + P+ + N+ + S Y
Sbjct: 893 GHMHTQVPPYPQPQPYQPAQPYPFGTGGSAM-YRPQQPVAPPTSNAYPNTPYISSASSY- 950
Query: 406 MVDSSQQYY-QEPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFI 464
SQ Y Q SP S P ++ P P S+G + P +
Sbjct: 951 -TGQSQLYAAQHQASSPT--SSPATSF-----PP--PPSSGASFQHGGPGAPPSSSAYAL 1000
Query: 465 PPQATQPNFTAPAPAPVTSQPAMRPFIP-STPPVLRNAEQYQQPTLGSQLYPGVSNPGYP 523
PP T T PA + + + P + PP L + ++ + P V
Sbjct: 1001 PPGTTG---TLPAASELPASQRTGPQNGWNDPPALNRVPKKKK--MPENFMPPVPITSPI 1055
Query: 524 VPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVVQRP-GMGSMXXXXXX 582
+ P+ D + + Q + P P P P G P G VQ+P G M
Sbjct: 1056 MNPLGDPQSQMLQQQPSAPVPLSSQSSFPQPHLPGGQPFHG---VQQPLGQTGMPPSFSK 1112
Query: 583 XXXXXXXXX-XXXXXXXXXXXDTSNVPAHQKPVINT---LTRLFNETSEALGGSRANPAK 638
T + +KP+ + L F + + S +P
Sbjct: 1113 PNIEGAPGAPIGNTFQHVQSLPTKKIT--KKPIPDEHLILKTTFEDLIQRCLSSATDPQT 1170
Query: 639 KREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDFGTALQIQV-LLTTSDWD 697
KR+++D S+++ L+ KL +S L + ++++ ++ L + +++TS++
Sbjct: 1171 KRKLDDASKRLEFLYDKLREQTLSPTITSGLHNIARSIETRNYSEGLTMHTHIVSTSNFS 1230
Query: 698 ECNFWLATLKRMIKTRQN 715
E + ++ LK ++ T+ N
Sbjct: 1231 ETSAFMPVLK-VVLTQAN 1247
Score = 107 (42.7 bits), Expect = 7.9e-78, Sum P(3) = 7.9e-78
Identities = 28/72 (38%), Positives = 35/72 (48%)
Query: 354 PLRAP-KWYKRPAGASFGFGGKLVSFH----PKSSAGHTSENSQHAPVHGVDQSKYGMVD 408
PL+ P KW +RP GASF FGGKLV+F P + H + V K +
Sbjct: 382 PLKKPPKWIRRPVGASFSFGGKLVTFENVRMPSHQGAEQQQQQHHVFISQVVTEKEFLSR 441
Query: 409 SSQQYYQEPVQS 420
S Q Q+ VQS
Sbjct: 442 SDQ--LQQAVQS 451
Score = 64 (27.6 bits), Expect = 2.7e-71, Sum P(2) = 2.7e-71
Identities = 41/183 (22%), Positives = 65/183 (35%)
Query: 316 YPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKL 375
YP P + SASS+ G+ +Y +++ S A P +GASF GG
Sbjct: 938 YPNTPYISSASSYTGQSQLY----AAQHQASSPTSSPATSFPPP---PSSGASFQHGGPG 990
Query: 376 VSFHPKSSAGHTSENSQHAPVHGVDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGT-YGDN 434
P SS+ + + + Q + +P P VP +N
Sbjct: 991 A---PPSSSAYALPPGTTGTLPAASELPASQRTGPQNGWNDP---PALNRVPKKKKMPEN 1044
Query: 435 YQQPL---GPYSNGRGYGASAAYQPAPQPGLFIPPQAT--QPNFTAPAPAPVTSQPAMRP 489
+ P+ P N G S Q P + + Q++ QP+ P QP +
Sbjct: 1045 FMPPVPITSPIMNPLGDPQSQMLQQQPSAPVPLSSQSSFPQPHLPGGQPFHGVQQPLGQT 1104
Query: 490 FIP 492
+P
Sbjct: 1105 GMP 1107
Score = 41 (19.5 bits), Expect = 7.9e-78, Sum P(3) = 7.9e-78
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 668 KLVQLCQALDNNDFGTAL 685
K VQL QA+D + G L
Sbjct: 729 KAVQLTQAMDTSTVGVLL 746
Score = 40 (19.1 bits), Expect = 8.4e-71, Sum P(3) = 8.4e-71
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 458 PQPGLFIPPQATQPNFTAPAPAP 480
P P L IP Q Q + P P
Sbjct: 364 PLPPLQIPQQTAQHSIVLPLKKP 386
Score = 37 (18.1 bits), Expect = 2.1e-77, Sum P(3) = 2.1e-77
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 643 EDNSRKIGALFAKLNSGDISKNAADKLVQ 671
ED +KI K++ +++ +D++ Q
Sbjct: 498 EDLGKKIALALNKVDGANVALKDSDQVAQ 526
>CGD|CAL0000444 [details] [associations]
symbol:PGA63 species:5476 "Candida albicans" [GO:0030127
"COPII vesicle coat" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043332 "mating projection tip" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0090114 "COPII-coated vesicle budding" evidence=IEA]
[GO:0006998 "nuclear envelope organization" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000633 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000444 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0005198 GO:GO:0015629
GO:GO:0015031 GO:GO:0007155 EMBL:AACQ01000038 EMBL:AACQ01000037
eggNOG:NOG248389 KO:K14005 RefSeq:XP_718724.1 RefSeq:XP_718807.1
ProteinModelPortal:Q5AAU3 STRING:Q5AAU3 GeneID:3639524
GeneID:3639607 KEGG:cal:CaO19.13598 KEGG:cal:CaO19.6217
InterPro:IPR009917 Pfam:PF07304 Uniprot:Q5AAU3
Length = 1265
Score = 592 (213.5 bits), Expect = 1.6e-77, Sum P(3) = 1.6e-77
Identities = 126/345 (36%), Positives = 192/345 (55%)
Query: 1 MACIKGINRSASVAFAP-DAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVG 59
M I I R+++ A++ + P +AAGT+AGAVD++FSSSA LE++ D S +
Sbjct: 1 MVKISEIARTSTFAWSSKNLPLLAAGTVAGAVDINFSSSATLELW--DIFSPTNKTEPIF 58
Query: 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL 119
+ RF LAW K G GL+AG +G+++ W+ LI + + +
Sbjct: 59 SATVDNRFYALAWSKPFEGRPQ---GLLAGAFENGTVEFWDADVLIKTKDLA-KASVHKS 114
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
++H G V+ L+FN ++L +G +G+I IWD +EP F P G EI+FV
Sbjct: 115 NKHTGAVKSLQFNPIQNHVLVTGGSNGQIFIWDTKTFSEP--FAP--GQAMTPMDEITFV 170
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESI---KRRCSVLQWNPDVATQLVVA 236
SWN+ V HILAST G T +WDLK ++ V+ S + + S + W+P +T+L+ A
Sbjct: 171 SWNNSVSHILASTGNGGYTSIWDLKTKREVLHLSYTGAGGRANFSYVSWHPSQSTKLITA 230
Query: 237 SDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296
SD DS P + WD+RN+ +P K GH KGV+++ WC D + LL+ KDN T W+ +
Sbjct: 231 SDNDSCPLILTWDLRNSNAPEKILEGHKKGVLSLDWCKQDPTLLLSSGKDNSTFLWNPIE 290
Query: 297 GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341
G + E P NW F+ + P P + + +SFDGK+ + I+ S
Sbjct: 291 GIKLGEYPTTANWAFETKFAPAAPDIFATASFDGKVVVQTIQDTS 335
Score = 164 (62.8 bits), Expect = 1.6e-77, Sum P(3) = 1.6e-77
Identities = 69/279 (24%), Positives = 108/279 (38%)
Query: 452 AAYQPAPQPGLFIPP---QATQPNFTAPAPAPVTSQP--AMRPFIPSTPPVLRNAEQYQQ 506
A+ +P P + P A+QP + A + S P A P+ PS L Y
Sbjct: 987 ASPKPTPVSNKYAPAVTSDASQPPSSGFASPTLNSSPRLAKNPYAPSVTEQLPPKISYAT 1046
Query: 507 PTLGSQLYPGVSNPGYPVP--PVSDARGSLPSQIGAVP---GPKMPNVVAPTPTPTGF-- 559
P G S P Y P P + + S G P PK+ + P P P G
Sbjct: 1047 PPAHHLANNGPSTPSYAPPKNPYAVPPSTSVSHAGIAPPPPAPKLGSAAPPPPQPFGSSM 1106
Query: 560 -MPMSGS--GVVQRP---GMGSMXXXXXXXXXXXXXXXXXXXXXXXXXXDTSNVPAHQKP 613
MP+ + GV P G D +++P + P
Sbjct: 1107 SMPVQPAFNGVPPPPPPVGRAVSTPAAAKIEQPPAREPELPVQSKHPKGDRTHIPENSLP 1166
Query: 614 VINTLTRLFNETSEALGGSRAN-PAK-KREIEDNSRKIGALFAKLNSGDISKNAADKLVQ 671
+ N+LT + EA+ + N P K + D +++ LF LN+ +IS + L++
Sbjct: 1167 IYNSLTNVL----EAI---KPNIPEKYAKHGTDMEQRLNILFDHLNNEEISNGVIELLLK 1219
Query: 672 LCQALDNNDFGTALQIQVLLTTSDWDECNFWLATLKRMI 710
+ +L++ DF A + + + T DE W LKR+I
Sbjct: 1220 VATSLESKDFANATAVNLQIATEHSDEIGNWHTGLKRLI 1258
Score = 88 (36.0 bits), Expect = 1.6e-77, Sum P(3) = 1.6e-77
Identities = 24/79 (30%), Positives = 35/79 (44%)
Query: 356 RAPKWYKRPAGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGMVDSSQQYYQ 415
+AP W K P+ SFGFG KLV + SS T + + G ++++ D Y
Sbjct: 368 QAPNWLKNPSNVSFGFGSKLVIINTDSSGKSTVKVDKFV-AKGQEKTEKLFKDLKNDNYS 426
Query: 416 EPVQSPLHQSVPGGTYGDN 434
+Q L G T +N
Sbjct: 427 SLIQDKLE----GETVNEN 441
Score = 80 (33.2 bits), Expect = 1.0e-68, Sum P(3) = 1.0e-68
Identities = 33/108 (30%), Positives = 37/108 (34%)
Query: 421 PLHQSVPGGTYGDNYQQPLGPY----SNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAP 476
P H G +Y P PY S + A PAP+ G PP QP F +
Sbjct: 1048 PAHHLANNGPSTPSYAPPKNPYAVPPSTSVSHAGIAPPPPAPKLGSAAPPPP-QP-FGSS 1105
Query: 477 APAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPV 524
PV QPA P PPV R P P P PV
Sbjct: 1106 MSMPV--QPAFNGVPPPPPPVGRAVST---PAAAKIEQPPAREPELPV 1148
Score = 71 (30.1 bits), Expect = 6.2e-61, Sum P(2) = 6.2e-61
Identities = 50/201 (24%), Positives = 71/201 (35%)
Query: 382 SSAGHTSENSQHA-PVHGVDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGTYGDNYQQPLG 440
+SA +S N++ A P Q++ + Y PVQ+P Q+ QQ
Sbjct: 762 ASAVKSSANAKIAKPASSSGQTRASINAVPAPAYAPPVQAPPVQAPQPPLVQQQQQQQQQ 821
Query: 441 PYSNGRGYGAS--AAYQPAPQPGLFIPPQATQPNFTAPAPAPVTSQPAMRPFIPSTPPVL 498
N GY A P P P A N PA +PV + ++ PP
Sbjct: 822 QQPNRYGYAQPTYAGAAPKTNPYARTNPYAPSNNIYKPA-SPVATPSSLSGTTSGVPPPP 880
Query: 499 RNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPT--P 556
A Y+ T G +P A+ + P + A P P V PTP P
Sbjct: 881 PKAS-YKHETEGWN----------DLPDTFKAKTAAPRRAAAAATP--P-VSTPTPVSAP 926
Query: 557 TGFMPMSGSGVVQRPG-MGSM 576
P +PG +GS+
Sbjct: 927 AFGSPGQPPSAPSQPGSVGSV 947
Score = 69 (29.3 bits), Expect = 1.5e-67, Sum P(3) = 1.5e-67
Identities = 29/108 (26%), Positives = 39/108 (36%)
Query: 468 ATQPNFT-APAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVPP 526
AT P T P AP P P PS P + + P + + +N P PP
Sbjct: 913 ATPPVSTPTPVSAPAFGSPGQPPSAPSQPGSVGSVSSAGYP---KKTF-SATNV-LPPPP 967
Query: 527 VSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVVQRPGMG 574
S +R + S+ +P PTP + P S Q P G
Sbjct: 968 KSISRST--SRTTVPTSSTVPASPKPTPVSNKYAPAVTSDASQPPSSG 1013
Score = 39 (18.8 bits), Expect = 1.4e-57, Sum P(2) = 1.4e-57
Identities = 8/15 (53%), Positives = 8/15 (53%)
Query: 377 SFHPKSSAGHTSENS 391
S HPK H ENS
Sbjct: 1150 SKHPKGDRTHIPENS 1164
>POMBASE|SPBC8D2.20c [details] [associations]
symbol:sec31 "COPII-coated vesicle component Sec31
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IMP] [GO:0006998
"nuclear envelope organization" evidence=IMP] [GO:0030127 "COPII
vesicle coat" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC8D2.20c GO:GO:0005829 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006998 GO:GO:0006888 GO:GO:0030127
EMBL:AB004537 eggNOG:NOG248389 KO:K14005 InterPro:IPR009917
Pfam:PF07304 OMA:NQPPPMM OrthoDB:EOG4RR9RS PIR:T40765
RefSeq:NP_595582.1 ProteinModelPortal:O13637 STRING:O13637
EnsemblFungi:SPBC8D2.20c.1 GeneID:2541273 KEGG:spo:SPBC8D2.20c
NextBio:20802385 Uniprot:O13637
Length = 1224
Score = 498 (180.4 bits), Expect = 1.5e-69, Sum P(3) = 1.5e-69
Identities = 113/348 (32%), Positives = 185/348 (53%)
Query: 4 IKGINRSASVAFAP-----DAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLV 58
+K I+++A++A++P + +A G G + S +S LE++ + +S+ V
Sbjct: 3 LKDISKTATLAWSPRGVNDNQALLALGGYTGT-EGSKNSDTLLELWNENPESQKP----V 57
Query: 59 GESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH 118
G RF LAW K S D +G++AG L DG I W+P +++ S E + IA
Sbjct: 58 GSIDVKTRFYDLAWEK----SLDKPMGVIAGSLEDGGIGFWDPAAILKSDEASAS--IAT 111
Query: 119 LSRHKGPVRG-LEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEIS 177
G + G L+FN PNLLASG + G++ +WD+ P +P P + N S+ E+
Sbjct: 112 YKSENGSILGPLDFNRLQPNLLASGDNKGDVWVWDIKHPQQPFALP--KQNRSS---EVH 166
Query: 178 FVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS-------ESIKRRCSVLQWNPDVA 230
VSWN+KV HILAS + T VWD+K ++ V++ S + + + W+P+ A
Sbjct: 167 VVSWNNKVSHILASGNATEYTTVWDVKLKRQVLNLSYLGAAGVSAATGAVNSIAWHPNNA 226
Query: 231 TQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI 290
T+L A D++ +P + WD+R P GH K +++SWCP D ++LL+ KD R +
Sbjct: 227 TRLATAIDDNRNPIILTWDLRQPTVPQNILTGHQKAALSLSWCPEDPTFLLSSGKDGRAM 286
Query: 291 CWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
W+ +GE + P NW W P ++ +S +GK+ I++I+
Sbjct: 287 VWNVETGESLGSFPRSGNWYTKSSWCPSNSNRVAVASLEGKVSIFSIQ 334
Score = 204 (76.9 bits), Expect = 1.5e-69, Sum P(3) = 1.5e-69
Identities = 77/314 (24%), Positives = 125/314 (39%)
Query: 420 SPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPA-PQPGLFIPPQATQPNFTAPAP 478
+P S P G+ Y P G QP+ P P + PQ+ P A
Sbjct: 920 APAIASPPPPKVGETYHPP-----TASGTRVPPVQQPSHPNPYTPVAPQS--P---VAAA 969
Query: 479 APVTSQPAMRPFIPSTPPVLR----NAEQYQQPTLGSQLYPGVSNPG---YPVPPVSDAR 531
+ ++S P M P P TP + N +P GSQ+ P P P+PP + R
Sbjct: 970 SRISSSPNMPPSNPYTPIAVASSTVNPAHTYKPHGGSQIVPPPKQPANRVVPLPPTASQR 1029
Query: 532 GSL--PSQIGAVPGPKM--PNVVAPTPTPTGFMP-MSGSG--VVQRPGMGSMXXXXXXXX 584
S P + +VP P P+V P + +P +S + + Q P + +
Sbjct: 1030 ASAYEPPTV-SVPSPSALSPSVTPQLPPVSSRLPPVSATRPQIPQPPPVSTALPSSSAVS 1088
Query: 585 XXXXXXXXXXXXXXXXXX--------DTSNVPAHQKPVINTLTRLFNETSEALGGSRANP 636
D S++P + +P+ L S++L P
Sbjct: 1089 RPPIATSAGRSSTAASTSAPLTYPAGDRSHIPGNLRPIYEMLNAELQRVSQSLP-----P 1143
Query: 637 AKKREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDFGTALQIQVLLTTSDW 696
R + D +++ LF +LNS +SK D+L+ L +L+ +D+ TA IQ + T+
Sbjct: 1144 QMSRVVHDTEKRLNMLFDRLNSNVLSKPLTDELLALATSLNAHDYQTASNIQTNIVTTLG 1203
Query: 697 DECNFWLATLKRMI 710
D+C W+ + R+I
Sbjct: 1204 DQCEHWIVGVTRLI 1217
Score = 107 (42.7 bits), Expect = 2.1e-59, Sum P(3) = 2.1e-59
Identities = 51/165 (30%), Positives = 63/165 (38%)
Query: 421 PLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLF-IPPQA---TQPNFTAP 476
PL T G N LG R + A + +P PG P A T T P
Sbjct: 850 PLPPPSTSTTAGWNDAPMLGQLPMRRAAPSMAPVR-SPFPGASSAQPAAMSRTSSVSTLP 908
Query: 477 APAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVP--PVS-DARGS 533
P P S A P I S PP + E Y PT P V P +P P PV+ + +
Sbjct: 909 PPPPTASMTASAPAIASPPPP-KVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVA 967
Query: 534 LPSQIGAVPG-----PKMPNVVAP-TPTPTG-FMPMSGSGVVQRP 571
S+I + P P P VA T P + P GS +V P
Sbjct: 968 AASRISSSPNMPPSNPYTPIAVASSTVNPAHTYKPHGGSQIVPPP 1012
Score = 103 (41.3 bits), Expect = 1.5e-69, Sum P(3) = 1.5e-69
Identities = 26/58 (44%), Positives = 33/58 (56%)
Query: 325 ASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKS 382
A+S D N+ + G + +FS PL APKW+K P GA FGF K+VSF P S
Sbjct: 349 ATSIDDNEFFNNLPSIA--GSQEPSFSL-PL-APKWFKVPVGARFGFPNKIVSFSPNS 402
>SGD|S000002354 [details] [associations]
symbol:SEC31 "Component of the Sec13p-Sec31p complex of the
COPII vesicle coat" species:4932 "Saccharomyces cerevisiae"
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0012507 "ER to
Golgi transport vesicle membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0090114 "COPII-coated
vesicle budding" evidence=IDA;IMP] [GO:0030127 "COPII vesicle coat"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002354 GO:GO:0043332
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0005198 GO:GO:0015031
EMBL:BK006938 EMBL:X83276 GO:GO:0030127 PDB:2QTV PDBsum:2QTV
eggNOG:NOG248389 KO:K14005 GeneTree:ENSGT00390000003175 PDB:2PM6
PDB:2PM7 PDB:2PM9 PDB:3MZL PDBsum:2PM6 PDBsum:2PM7 PDBsum:2PM9
PDBsum:3MZL GO:GO:0090114 InterPro:IPR009917 Pfam:PF07304
HOGENOM:HOG000048339 OrthoDB:EOG4RR9RS EMBL:U15219 EMBL:Z74243
PIR:S58782 RefSeq:NP_010086.2 ProteinModelPortal:P38968 SMR:P38968
DIP:DIP-4792N IntAct:P38968 MINT:MINT-567140 STRING:P38968
PaxDb:P38968 PeptideAtlas:P38968 EnsemblFungi:YDL195W GeneID:851332
KEGG:sce:YDL195W CYGD:YDL195w OMA:VECWALH EvolutionaryTrace:P38968
NextBio:968393 Genevestigator:P38968 GermOnline:YDL195W
InterPro:IPR021614 Pfam:PF11549 Uniprot:P38968
Length = 1273
Score = 507 (183.5 bits), Expect = 2.1e-56, Sum P(3) = 2.1e-56
Identities = 106/347 (30%), Positives = 192/347 (55%)
Query: 1 MACIKGINRSASVAFAPDA-PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVG 59
M + +R+A+ A++ D P + +GT++G VD +FS+ ++LE++ L ++ +
Sbjct: 1 MVKLAEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKP---IA 57
Query: 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL 119
+FN L W N ++AG L +GS+++++ + N + A
Sbjct: 58 SLQVDSKFNDLDWSHNNK--------IIAGALDNGSLELYST----NEANNAINSM-ARF 104
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE-PSHFPPLR-GNGSAAQGEIS 177
S H V+ ++FN+ N+LASG ++GEI IWD++ E PS++ PL G ++ E+
Sbjct: 105 SNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI 164
Query: 178 FVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS-----ESIKRRCSVLQWNPDVATQ 232
++WN + H+ AS + +WDLK +K VI S IK++ SV++W+P +T+
Sbjct: 165 SLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTR 224
Query: 233 LVVASDEDSSPALRLWDMRNTMSPVKEF-VGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC 291
+ A+ D+ P++ +WD+RN +P++ GH KG++++ WC D LL+ +DN +
Sbjct: 225 VATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLL 284
Query: 292 WDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
W+ S E +S+ PA NW F + P+ P + + +SFD KI + ++
Sbjct: 285 WNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ 331
Score = 88 (36.0 bits), Expect = 2.1e-56, Sum P(3) = 2.1e-56
Identities = 63/273 (23%), Positives = 98/273 (35%)
Query: 463 FIPPQATQ--PNFTAPAPAPVTSQPAM----RPFIPSTPPVLRNAEQYQQPTLGSQLYPG 516
+ PPQ++Q P T + A TS A P+ P PP R A + L P
Sbjct: 1008 YAPPQSSQQFPIGTI-STANQTSNTAQVASSNPYAP--PPQQRVATPLSGGVPPAPL-PK 1063
Query: 517 VSNPGYPVPPVSDARGSLPSQIGAVPGPKMPN--VVAPTPT----PTGFMPMSG------ 564
SNP P S P GP N + +P P PTG P+S
Sbjct: 1064 ASNPYAPTATTQPNGSSYPPT-----GPYTNNHTMTSPPPVFNKPPTGPPPISMKKRSNK 1118
Query: 565 -SGVVQRPGMGSMXXXXXXXXXXXXXXXXXXXXXXXXXXDTSNV----PAHQKPVINTLT 619
+ + Q P G+ NV PA Q+P+++ L
Sbjct: 1119 LASIEQNPSQGATYPPTLSSSASPLQPSQPPTLASQVNTSAENVSHEIPADQQPIVDFLK 1178
Query: 620 RLFNETSEALGGSRANPAK-KREIEDNSRKIGALFAKLNSGDI-SKNAADKLVQLCQALD 677
E + P + ++++D +++ LF L D+ ++ D L L +
Sbjct: 1179 E------ELARVTPLTPKEYSKQLKDCDKRLKILFYHLEKQDLLTQPTIDCLHDLVALMK 1232
Query: 678 NNDFGTALQIQVLLTTSDWDECNFWLATLKRMI 710
+ A+ I + T+ E WL +KR+I
Sbjct: 1233 EKKYKEAMVIHANIATNHAQEGGNWLTGVKRLI 1265
Score = 82 (33.9 bits), Expect = 9.1e-56, Sum P(3) = 9.1e-56
Identities = 52/199 (26%), Positives = 77/199 (38%)
Query: 387 TSENSQHAPVHGVDQSKYGMVDSSQQYYQEPVQS-PLHQSVPGGTYGDNYQQPLG-PYSN 444
TS S AP +G+ + Y S P+H G Y Q + P+ N
Sbjct: 784 TSIPSMQAPFYGMTPGASANALPPKPYVPATTTSAPVHTE---GKYAPPSQPSMASPFVN 840
Query: 445 GRGYGASA-AYQPAPQPGLFIPPQATQPNFTA-PAP--APVT-SQPAMRPF------IPS 493
++ P P P AT + T+ P AP+ P M + IPS
Sbjct: 841 KTNSSTRLNSFAPPPNPYATATVPATNVSTTSIPQNTFAPIQPGMPIMGDYNAQSSSIPS 900
Query: 494 TPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQIGAVP-GPKMPNVVAP 552
PP+ NA Q P L + +N G+ P+ PS+ AV P PN+++
Sbjct: 901 QPPI--NAVSGQTPHLNRK-----ANDGWNDLPLKVKEK--PSRAKAVSVAP--PNILS- 948
Query: 553 TPTPTGFMPMSGSGVVQRP 571
TPTP +P + + + P
Sbjct: 949 TPTPLNGIPANAASTMPPP 967
Score = 77 (32.2 bits), Expect = 3.0e-55, Sum P(3) = 3.0e-55
Identities = 41/153 (26%), Positives = 60/153 (39%)
Query: 389 ENSQHAPVHGVDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGY 448
++SQ P+ G + +++Q P P Q V G PL SN Y
Sbjct: 1012 QSSQQFPI-GTISTANQTSNTAQVASSNPYAPPPQQRVATPLSGGVPPAPLPKASNP--Y 1068
Query: 449 GASAAYQPAPQPGLFIPPQATQPN-FTAPAPAPVTSQPAMRPFIPSTPPVLRN--AEQYQ 505
+A QP G PP N T +P PV ++P P P + N A Q
Sbjct: 1069 APTATTQPN---GSSYPPTGPYTNNHTMTSPPPVFNKPPTGP-PPISMKKRSNKLASIEQ 1124
Query: 506 QPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQI 538
P+ G+ P +S+ P+ P +L SQ+
Sbjct: 1125 NPSQGATYPPTLSSSASPLQPSQPP--TLASQV 1155
Score = 70 (29.7 bits), Expect = 2.1e-56, Sum P(3) = 2.1e-56
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 355 LRAPKWYKRPAGAS-FGFGGKLVSFHP 380
L+AP WY P+ A+ + FGGKLV P
Sbjct: 371 LQAPTWYGEPSPAAHWAFGGKLVQITP 397
Score = 68 (29.0 bits), Expect = 2.6e-54, Sum P(3) = 2.6e-54
Identities = 28/110 (25%), Positives = 39/110 (35%)
Query: 457 APQPGLFIPPQATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQ---- 512
AP + P N P+ + P P PP ++++Q+ T+ +
Sbjct: 972 APSSVSMVSPPPLHKNSRVPSLVATSESPRASISNPYAPP--QSSQQFPIGTISTANQTS 1029
Query: 513 --LYPGVSNPGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPT--PTG 558
SNP Y PP L + P PK N APT T P G
Sbjct: 1030 NTAQVASSNP-YAPPPQQRVATPLSGGVPPAPLPKASNPYAPTATTQPNG 1078
Score = 64 (27.6 bits), Expect = 6.9e-54, Sum P(3) = 6.9e-54
Identities = 34/121 (28%), Positives = 47/121 (38%)
Query: 456 PAPQPGLFIPPQATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYP 515
P P G IP A T P P P++ P+ + S PP+ +N+
Sbjct: 950 PTPLNG--IPANAAS---TMPPP-PLSRAPSSVSMV-SPPPLHKNSRVPSLVATSESPRA 1002
Query: 516 GVSNPGYPVPPVSDAR---GSLPS--QIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVVQR 570
+SNP Y PP S + G++ + Q N AP P P+SG GV
Sbjct: 1003 SISNP-Y-APPQSSQQFPIGTISTANQTSNTAQVASSNPYAPPPQQRVATPLSG-GVPPA 1059
Query: 571 P 571
P
Sbjct: 1060 P 1060
Score = 58 (25.5 bits), Expect = 2.9e-53, Sum P(3) = 2.9e-53
Identities = 30/105 (28%), Positives = 36/105 (34%)
Query: 450 ASAAYQPAPQPGLFIPPQATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTL 509
AS PA P +A N PV P M PST + Q P
Sbjct: 743 ASGKSLPAQNPATATTSKAKYTNAKTNKNVPVLPTPGM----PSTTSI----PSMQAPFY 794
Query: 510 GSQLYPGVS-NPGYPVPPVSDARGSLPSQI-GAVPGPKMPNVVAP 552
G + PG S N P P V S P G P P++ +P
Sbjct: 795 G--MTPGASANALPPKPYVPATTTSAPVHTEGKYAPPSQPSMASP 837
>GENEDB_PFALCIPARUM|PFB0640c [details] [associations]
symbol:PfSec31p "COPII-coated vesicle component,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE001362
GenomeReviews:AE001362_GR RefSeq:XP_001349646.2
ProteinModelPortal:O96221 IntAct:O96221 MINT:MINT-1565319
PRIDE:O96221 EnsemblProtists:PFB0640c:mRNA GeneID:812728
KEGG:pfa:PFB0640c EuPathDB:PlasmoDB:PF3D7_0214100
HOGENOM:HOG000284340 ProtClustDB:CLSZ2514733 Uniprot:O96221
Length = 1471
Score = 464 (168.4 bits), Expect = 3.7e-48, Sum P(3) = 3.7e-48
Identities = 102/305 (33%), Positives = 172/305 (56%)
Query: 77 SGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTP 136
+ +E+ S G++ GGL +G I + N +L + N +++ + H + LE+N
Sbjct: 116 NNNEELSKGIIVGGLTNGDIVLLNAKNLFETNRNYDNFILSKTNIHDNGINCLEYNRHKN 175
Query: 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG 196
NL+A+G +DG++ I D+ P+ + P + + I+ ++WN KV HILA++S NG
Sbjct: 176 NLIATGGNDGQLFITDIENLYSPTSYDPYLDKNNLQK--ITCLNWNKKVSHILATSSNNG 233
Query: 197 TTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
TV+WDLK +K +SF + R + S L W + TQ++++ D+D +P L+LWD+RN+
Sbjct: 234 NTVIWDLKIKKSAVSFRDPHSRTKTSSLSWLSNQPTQVLISYDDDKNPCLQLWDLRNSNY 293
Query: 256 PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW--DTVSGEIVSELPAGTNWNFDI 313
P+KE +GH+KG+ + + P D++ LL+ KD T CW D + +I +E+ N N
Sbjct: 294 PIKEIIGHSKGINNICFSPIDTNLLLSSGKDV-TKCWYLDNNNFDIFNEINNSAN-NIYS 351
Query: 314 HWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGG 373
W P IP + ++S+ I I +I ++ S + P +YK+ AG GFGG
Sbjct: 352 KWSPYIPDLFASSTNMDTIQINSINNGNKM---TSKY------IPTFYKKEAGICIGFGG 402
Query: 374 KLVSF 378
K+ +F
Sbjct: 403 KICTF 407
Score = 107 (42.7 bits), Expect = 3.7e-48, Sum P(3) = 3.7e-48
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 616 NTLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQA 675
N + + S L + + K++ +D S K+ LF KL+ G ++ D L+ L
Sbjct: 1373 NHIENIKKTISNLLNIYTSQESVKKKADDVSSKVYELFEKLDCGAFNEQINDSLLNLVNC 1432
Query: 676 LDNNDFGTALQIQVLLTTSDWDECN-FWLATLKRMI 710
++ NDF T +I V L+ + WD N W+ +K +I
Sbjct: 1433 INANDFKTTNKIIVDLSRNLWDGSNKAWIMGVKHII 1468
Score = 51 (23.0 bits), Expect = 3.7e-48, Sum P(3) = 3.7e-48
Identities = 23/90 (25%), Positives = 31/90 (34%)
Query: 399 VDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAP 458
++Q Y M + S + ++VPGG + DN Q YG P P
Sbjct: 1264 MEQPVYPMTNQSSMFSMNNTMQK--KNVPGG-FQDNTSQ--------MNYGMQPTGSPPP 1312
Query: 459 QPGLFIPPQA----TQPNFTAPAPAPVTSQ 484
P A P P P P T+Q
Sbjct: 1313 SSLSTTSPIAGALTVTPGMPVPWPIPTTTQ 1342
Score = 50 (22.7 bits), Expect = 4.7e-48, Sum P(3) = 4.7e-48
Identities = 23/79 (29%), Positives = 33/79 (41%)
Query: 480 PVTSQPAMRPFIPSTPPVLRNAEQ-YQQPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQI 538
P+T+Q +M F + +N +Q T SQ+ G+ G P P + +
Sbjct: 1270 PMTNQSSM--FSMNNTMQKKNVPGGFQDNT--SQMNYGMQPTGSPPPSSLSTTSPIAGAL 1325
Query: 539 GAVPGPKMPNVVAPTPTPT 557
PG MP V P PT T
Sbjct: 1326 TVTPG--MP-VPWPIPTTT 1341
>UNIPROTKB|O96221 [details] [associations]
symbol:Sec31p "Sec31p putative" species:36329 "Plasmodium
falciparum 3D7" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE001362 GenomeReviews:AE001362_GR
RefSeq:XP_001349646.2 ProteinModelPortal:O96221 IntAct:O96221
MINT:MINT-1565319 PRIDE:O96221 EnsemblProtists:PFB0640c:mRNA
GeneID:812728 KEGG:pfa:PFB0640c EuPathDB:PlasmoDB:PF3D7_0214100
HOGENOM:HOG000284340 ProtClustDB:CLSZ2514733 Uniprot:O96221
Length = 1471
Score = 464 (168.4 bits), Expect = 3.7e-48, Sum P(3) = 3.7e-48
Identities = 102/305 (33%), Positives = 172/305 (56%)
Query: 77 SGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTP 136
+ +E+ S G++ GGL +G I + N +L + N +++ + H + LE+N
Sbjct: 116 NNNEELSKGIIVGGLTNGDIVLLNAKNLFETNRNYDNFILSKTNIHDNGINCLEYNRHKN 175
Query: 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG 196
NL+A+G +DG++ I D+ P+ + P + + I+ ++WN KV HILA++S NG
Sbjct: 176 NLIATGGNDGQLFITDIENLYSPTSYDPYLDKNNLQK--ITCLNWNKKVSHILATSSNNG 233
Query: 197 TTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
TV+WDLK +K +SF + R + S L W + TQ++++ D+D +P L+LWD+RN+
Sbjct: 234 NTVIWDLKIKKSAVSFRDPHSRTKTSSLSWLSNQPTQVLISYDDDKNPCLQLWDLRNSNY 293
Query: 256 PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW--DTVSGEIVSELPAGTNWNFDI 313
P+KE +GH+KG+ + + P D++ LL+ KD T CW D + +I +E+ N N
Sbjct: 294 PIKEIIGHSKGINNICFSPIDTNLLLSSGKDV-TKCWYLDNNNFDIFNEINNSAN-NIYS 351
Query: 314 HWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGG 373
W P IP + ++S+ I I +I ++ S + P +YK+ AG GFGG
Sbjct: 352 KWSPYIPDLFASSTNMDTIQINSINNGNKM---TSKY------IPTFYKKEAGICIGFGG 402
Query: 374 KLVSF 378
K+ +F
Sbjct: 403 KICTF 407
Score = 107 (42.7 bits), Expect = 3.7e-48, Sum P(3) = 3.7e-48
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 616 NTLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQA 675
N + + S L + + K++ +D S K+ LF KL+ G ++ D L+ L
Sbjct: 1373 NHIENIKKTISNLLNIYTSQESVKKKADDVSSKVYELFEKLDCGAFNEQINDSLLNLVNC 1432
Query: 676 LDNNDFGTALQIQVLLTTSDWDECN-FWLATLKRMI 710
++ NDF T +I V L+ + WD N W+ +K +I
Sbjct: 1433 INANDFKTTNKIIVDLSRNLWDGSNKAWIMGVKHII 1468
Score = 51 (23.0 bits), Expect = 3.7e-48, Sum P(3) = 3.7e-48
Identities = 23/90 (25%), Positives = 31/90 (34%)
Query: 399 VDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAP 458
++Q Y M + S + ++VPGG + DN Q YG P P
Sbjct: 1264 MEQPVYPMTNQSSMFSMNNTMQK--KNVPGG-FQDNTSQ--------MNYGMQPTGSPPP 1312
Query: 459 QPGLFIPPQA----TQPNFTAPAPAPVTSQ 484
P A P P P P T+Q
Sbjct: 1313 SSLSTTSPIAGALTVTPGMPVPWPIPTTTQ 1342
Score = 50 (22.7 bits), Expect = 4.7e-48, Sum P(3) = 4.7e-48
Identities = 23/79 (29%), Positives = 33/79 (41%)
Query: 480 PVTSQPAMRPFIPSTPPVLRNAEQ-YQQPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQI 538
P+T+Q +M F + +N +Q T SQ+ G+ G P P + +
Sbjct: 1270 PMTNQSSM--FSMNNTMQKKNVPGGFQDNT--SQMNYGMQPTGSPPPSSLSTTSPIAGAL 1325
Query: 539 GAVPGPKMPNVVAPTPTPT 557
PG MP V P PT T
Sbjct: 1326 TVTPG--MP-VPWPIPTTT 1341
>UNIPROTKB|E1BMP2 [details] [associations]
symbol:E1BMP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051592 "response to calcium ion" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0048306 "calcium-dependent protein binding" evidence=IEA]
[GO:0030134 "ER to Golgi transport vesicle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 SMART:SM00320 GO:GO:0005783 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051592 GO:GO:0030134
GeneTree:ENSGT00390000003175 OMA:PSASNAY EMBL:DAAA02018265
EMBL:DAAA02018266 EMBL:DAAA02018267 EMBL:DAAA02018268
IPI:IPI00690839 Ensembl:ENSBTAT00000027346 Uniprot:E1BMP2
Length = 1160
Score = 341 (125.1 bits), Expect = 1.5e-41, Sum P(3) = 1.5e-41
Identities = 69/208 (33%), Positives = 114/208 (54%)
Query: 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGT 197
+L +G ++G I ++D S + N G + + N +L
Sbjct: 88 VLIAGGENGNIILYDPSKIIAGDKEVVIAQNDKHT-GPVRALDVNIFQVRLLTLGVNESE 146
Query: 198 TVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPV 257
+ ++ K I ++ CS L W+PDVATQ+V+AS++D P +++WD+R SP+
Sbjct: 147 HYLSNINSFKACIFPQNKVEMHCSGLAWHPDVATQMVLASEDDRLPVVQMWDLRFASSPL 206
Query: 258 KEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYP 317
+ H +G++A++W D LL+C KD + +C + +GE++ ELP T W FDI W P
Sbjct: 207 RVLENHARGILAIAWSMADPELLLSCGKDAKILCSNPNTGEVLYELPTTTQWCFDIQWCP 266
Query: 318 KIPGVISASSFDGKIGIYNIEGCSRYGV 345
+ P V+SA+SFDG+I +Y+I G S G+
Sbjct: 267 RNPAVLSAASFDGRISVYSIMGGSTDGL 294
Score = 262 (97.3 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 84/301 (27%), Positives = 148/301 (49%)
Query: 4 IKGINRSASVAFAP--DAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
+K ++R+A A++P + P Y+A GT A +D +FS+SA+LEIF+LD D+
Sbjct: 3 LKEVDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTSASLEIFELDLSDPSLDMKSCAT 62
Query: 61 SPSSERFNRLAWGKNGSGSEDFSLG-LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL 119
SS R+++L WG + S+ G L+AGG +G+I +++P +I+ + +IA
Sbjct: 63 FSSSHRYHKLIWGPHKMDSKGNISGVLIAGG-ENGNIILYDPSKIIAGDK---EVVIAQN 118
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
+H GPVR L+ N F LL G ++ E + ++++ + FP + + S +
Sbjct: 119 DKHTGPVRALDVNIFQVRLLTLGVNESEHYLSNINS-FKACIFPQ-----NKVEMHCSGL 172
Query: 180 SWNSKV--QHILASTSYNGTTV-VWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVA 236
+W+ V Q +LAS V +WDL+ + E+ R + W+ +L+++
Sbjct: 173 AWHPDVATQMVLASEDDRLPVVQMWDLRFASSPLRVLENHARGILAIAWSM-ADPELLLS 231
Query: 237 SDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296
+D A L NT + E T+ + WCP + + L + D R + +
Sbjct: 232 CGKD---AKILCSNPNTGEVLYELPTTTQWCFDIQWCPRNPAVLSAASFDGRISVYSIMG 288
Query: 297 G 297
G
Sbjct: 289 G 289
Score = 133 (51.9 bits), Expect = 1.5e-41, Sum P(3) = 1.5e-41
Identities = 75/341 (21%), Positives = 133/341 (39%)
Query: 392 QHAPVHGVDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGAS 451
Q P Q +G S+ Q+PV + P Y + YS G+
Sbjct: 828 QPQPYQPAQQYSFGTGGSAMYRPQQPVAPSTSNAYPNTPYIPSASS----YS-GQSQLYP 882
Query: 452 AAYQPAPQP-----GLFIPPQATQPNFTAPAP-APVTSQP-AMRPFI--PST----PPVL 498
A +Q AP P F PP ++ +F P AP TS A+ P P PP L
Sbjct: 883 AQHQ-APPPTSCPAASFPPPPSSGASFQHGGPGAPSTSSAYALPPGTTGPQNGWNDPPAL 941
Query: 499 -RNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPT 557
R ++ + P + P +++P + P+ D + + Q + P P P P
Sbjct: 942 NRGPKKKKMPENFTPPVP-ITSP--IMNPLGDPQSQMLQQQPSAPVPLSSQAPFPQPHLA 998
Query: 558 GFMPMSG-SGVVQRPGMG-SMXXXXXXXXXXXXXXXXXXXXXXXXXXDTSNVPAHQKPVI 615
G P G + +PGM S + P + +I
Sbjct: 999 GGQPFRGIQQPLSQPGMPPSFSKPNIEGAPGAPIGNTMQHVQSLPTEKITKKPIPDEHLI 1058
Query: 616 NTLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQA 675
L F + + S +P KR+++D S+++ L+ KL +S + L + ++
Sbjct: 1059 --LKTTFEDLIQRCLSSATDPQTKRKLDDASKRLEFLYDKLREQTLSPTIINGLHNIARS 1116
Query: 676 LDNNDFGTALQIQV-LLTTSDWDECNFWLATLKRMIKTRQN 715
++ ++ L I +++TS++ E + ++ LK ++ T+ N
Sbjct: 1117 IETRNYSEGLTIHTHIVSTSNFSETSAFMPVLK-VVLTQAN 1156
Score = 98 (39.6 bits), Expect = 1.5e-41, Sum P(3) = 1.5e-41
Identities = 28/72 (38%), Positives = 36/72 (50%)
Query: 354 PLRAP-KWYKRPAGASFGFGGKLVSFHPKSSAGHTSENSQ----HAPVHGVDQSKYGMVD 408
PL+ P +W +RP GASF FGGKLV+F + H Q H + V K +
Sbjct: 335 PLKKPPRWIRRPVGASFSFGGKLVTFANVRTQPHPGAEQQPQQHHVFISQVVTEKEFLSR 394
Query: 409 SSQQYYQEPVQS 420
S Q Q+ VQS
Sbjct: 395 SDQ--LQQVVQS 404
Score = 88 (36.0 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 61/224 (27%), Positives = 82/224 (36%)
Query: 354 PLRAPKWYKRPAGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGMVDSSQQY 413
P P+ Y+ SFG GG + + P+ ++ N+ + S Y Q
Sbjct: 825 PYPQPQPYQPAQQYSFGTGGSAM-YRPQQPVAPSTSNAYPNTPYIPSASSYS---GQSQL 880
Query: 414 YQEPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGY-GASAAYQ-P----APQPGLFIPPQ 467
Y Q+P S P ++ G G S+AY P PQ G PP
Sbjct: 881 YPAQHQAPPPTSCPAASFPPPPSSGASFQHGGPGAPSTSSAYALPPGTTGPQNGWNDPPA 940
Query: 468 ATQ-P-------NFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSN 519
+ P NFT P P P+TS P M P +L+ QQP S P S
Sbjct: 941 LNRGPKKKKMPENFT-P-PVPITS-PIMNPLGDPQSQMLQ-----QQP---SAPVPLSSQ 989
Query: 520 PGYPVPPVSDA---RG-SLP-SQIGAVPGPKMPNVVAPTPTPTG 558
+P P ++ RG P SQ G P PN+ P G
Sbjct: 990 APFPQPHLAGGQPFRGIQQPLSQPGMPPSFSKPNIEGAPGAPIG 1033
Score = 75 (31.5 bits), Expect = 6.0e-30, Sum P(2) = 6.0e-30
Identities = 44/181 (24%), Positives = 65/181 (35%)
Query: 316 YPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGG-- 373
YP P + SASS+ G+ +Y + ++ AA P +GASF GG
Sbjct: 862 YPNTPYIPSASSYSGQSQLYPAQ---HQAPPPTSCPAASFPPPP----SSGASFQHGGPG 914
Query: 374 -----KLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGMVDSSQQYYQEPVQSPLH----- 423
+ P ++ N A G + K + P+ +PL
Sbjct: 915 APSTSSAYALPPGTTGPQNGWNDPPALNRGPKKKKMPENFTPPVPITSPIMNPLGDPQSQ 974
Query: 424 --QSVPGGTYGDNYQQPLG-PYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAPAPAP 480
Q P + Q P P+ G G QP QPG+ PP ++PN AP
Sbjct: 975 MLQQQPSAPVPLSSQAPFPQPHLAG-GQPFRGIQQPLSQPGM--PPSFSKPNIEGAPGAP 1031
Query: 481 V 481
+
Sbjct: 1032 I 1032
Score = 69 (29.3 bits), Expect = 6.8e-35, Sum P(3) = 6.8e-35
Identities = 43/158 (27%), Positives = 56/158 (35%)
Query: 422 LHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTA------ 475
L Q++ T G + + Y+N S A A F+P QPN
Sbjct: 686 LTQAMDTNTVGVLLAEKMSQYANLLAAQGSIAAALA-----FLPENTNQPNIVQLRDRLC 740
Query: 476 -----PAPAPVTSQ--PAMRPFIPSTPPVLRNAEQYQQPTL-GSQLYPGVSNPGYPVPPV 527
P P P S P R +P P A Q P + Q YP NP P PP
Sbjct: 741 RAQGDPIPGPQESPKIPYERHQVPKNRPG-PGAGHAQMPRVPAQQYYPHGENP--P-PPG 796
Query: 528 SDARGSLPSQIGAVPGPKMP-NV---VAPTPTPTGFMP 561
G++ + A P P +V V P P P + P
Sbjct: 797 FVMHGNVSPNVAAAQLPTSPAHVHTQVPPYPQPQPYQP 834
Score = 46 (21.3 bits), Expect = 1.6e-32, Sum P(3) = 1.6e-32
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 668 KLVQLCQALDNNDFGTAL 685
K VQL QA+D N G L
Sbjct: 682 KAVQLTQAMDTNTVGVLL 699
Score = 40 (19.1 bits), Expect = 6.9e-32, Sum P(3) = 6.9e-32
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 643 EDNSRKIGALFAKLNSGDISKNAADKLVQ 671
ED +KI K++ D++ +D++ Q
Sbjct: 451 EDLGKKIALALNKVDGPDVALKDSDQVAQ 479
Score = 40 (19.1 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 458 PQPGLFIPPQATQPNFTAPAPAP 480
P P L IP Q T + P P
Sbjct: 317 PLPPLQIPQQTTPQSIVLPLKKP 339
Score = 38 (18.4 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 521 GYPVPPVSDARGSLPSQIGAVPGPKMP 547
G P+PP+ + + P I +P K P
Sbjct: 315 GQPLPPLQIPQQTTPQSI-VLPLKKPP 340
>WB|WBGene00011338 [details] [associations]
symbol:sec-31 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 Gene3D:2.130.10.10 SUPFAM:SSF50978
EMBL:Z92789 GeneTree:ENSGT00390000003175 EMBL:Z92811 PIR:T23031
RefSeq:NP_502144.1 ProteinModelPortal:G5EFY6 SMR:G5EFY6
EnsemblMetazoa:T01G1.3.1 EnsemblMetazoa:T01G1.3.2 GeneID:178060
KEGG:cel:CELE_T01G1.3 CTD:178060 WormBase:T01G1.3 OMA:VIWNHET
NextBio:899548 Uniprot:G5EFY6
Length = 1083
Score = 318 (117.0 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 94/354 (26%), Positives = 164/354 (46%)
Query: 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR--HK 123
RFN LAW S+ G++AGG DG++ ++ I + L LSR H
Sbjct: 69 RFNELAW--TSLCSDAHPNGIIAGGTEDGTVVFFDADKFIKN-----QSLEVLLSRRDHH 121
Query: 124 GPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNS 183
G V ++ S +ASG G+I +WD + P F P G+ + ++ + WN
Sbjct: 122 GHVLTIDV-SRDGRWMASGGGSGQILLWDCANLKTP--FSP--GSPNFPD-QVKLLRWNL 175
Query: 184 KVQHILASTSYNGTTVVWDLKKQ-KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSS 242
K + + AS S + WDL++ PV+ F+E S L WNP A+QL+V+S +
Sbjct: 176 KNESVFASISSRRVSF-WDLRRNGSPVLEFAEIPGCDWSSLSWNPSDASQLIVSSQSQHA 234
Query: 243 PALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSE 302
++ WD R T +PVKE+ H G+ ++ W D +++ D + + W+ + E++
Sbjct: 235 SVIQKWDSRFTSTPVKEYRHHNMGITSVDWNKADDRLVISSGCDGQVVIWNHETSEVLGG 294
Query: 303 LPA-GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSA--APLRAPK 359
+ + +W ++ W + P + F + I ++ G +A + P
Sbjct: 295 VGSLQGDWIRNVKWNEEEPSQFAIQYFQHPVQISSLTSLGSPQPGADVLAARISDQFVPA 354
Query: 360 WYKRPA-GASFGFGGKLVSFHPKSSAGHTSENSQHAPVHG-VDQSKYGMVDSSQ 411
W++ P G+S GG+L +F KS T + + + V ++ G+ D +Q
Sbjct: 355 WHRAPLIGSSIALGGRLATFW-KSYDAMTQQWHHNVEIETIVPENDVGVNDIAQ 407
Score = 60 (26.2 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 24/86 (27%), Positives = 32/86 (37%)
Query: 414 YQEPVQSPLHQSVPG-GTYGDNYQQ-PLGP--YSNGRGYGASAAYQPAPQPGLFIPPQAT 469
YQ+P P V G Y ++ Q P P YSN R ++ P P F +
Sbjct: 796 YQQPAPIPPPNLVNGFNPYNPSHSQCPPPPMDYSNNR---RNSNLTPMPPSSTFYQTPSW 852
Query: 470 QPNFTAPAPAPVTSQPAMRPFIPSTP 495
P P + P +P P TP
Sbjct: 853 DHK---PPPTMPANMPPSKPVAPVTP 875
Score = 52 (23.4 bits), Expect = 8.9e-25, Sum P(3) = 8.9e-25
Identities = 25/97 (25%), Positives = 38/97 (39%)
Query: 422 LHQSVPGGTYGDNYQQPLGPYSNG---RGYGASAAYQPAP--QPGLFIPPQATQPNFTAP 476
LHQ G Y D ++ + ++N +G G S A+ Q G + +
Sbjct: 704 LHQVSKGAKYSDGLEKLIMNFANELLIQGAG-SVAWNLVKWSQNGSAEMQELQWTCYNVA 762
Query: 477 APAPVTS-QPAMRPF---IPST--PPVLRNAEQYQQP 507
T QP PF +P PP+++ YQQP
Sbjct: 763 GGRDCTGDQPPFNPFDVALPRAQQPPIVQPTRTYQQP 799
Score = 49 (22.3 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 25/88 (28%), Positives = 32/88 (36%)
Query: 466 PQATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVP 525
P QP T PAP+ + F P P + Q P + SN P+P
Sbjct: 787 PPIVQPTRTYQQPAPIPPPNLVNGFNPYNP----SHSQCPPPPMDYSNNRRNSNLT-PMP 841
Query: 526 PVSDARGSLPSQIGAVPGPKMPNVVAPT 553
P S PS P P MP + P+
Sbjct: 842 P-SSTFYQTPSW-DHKPPPTMPANMPPS 867
Score = 43 (20.2 bits), Expect = 7.5e-24, Sum P(3) = 7.5e-24
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 450 ASAAYQPAPQPGLFIPPQATQPNFTAPAPAPVT--SQPAMRPFIPSTPPVLRNA 501
+SAA P P + A+ + APAP ++ + + P ++ NA
Sbjct: 945 SSAASSAFPSPNSYQQRPASAASVVAPAPIQLSPEDEKIIEPINTLAQCIIENA 998
Score = 41 (19.5 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 603 DTSNVPAHQKPVINTLTRLFNETSEALGGSRANPAKKREI 642
+ + + A + + TR+ E S L +R +P K+ +
Sbjct: 996 ENARIQARMEKAQDLRTRIQAELSPRLAANRLSPESKQHL 1035
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 188 (71.2 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 61/249 (24%), Positives = 112/249 (44%)
Query: 79 SEDFSLGLVAGGLVDGSIDIWNPLSLISS--GETGGNPLIA--H-LSRHKGPVRGLEFNS 133
S D +VA + S+ IWN + + + ET A H +S H L+++
Sbjct: 201 SMDQQSNIVATWSDNRSVYIWNIANHLKALDNETVAPKQTAPLHTISNHSIEGYALDWSP 260
Query: 134 FTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS 193
LA+G + I + + S + +G+ + + + W+ + + AS S
Sbjct: 261 KIAGRLATGDCNNSIFVTNASESTWKTDTQAFKGHTESVED----IQWSPSEEKVFASCS 316
Query: 194 YNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR-- 251
+ T +WD++K KP I+ ++ +V+ W+ +V LV D+ S R+WD+R
Sbjct: 317 IDQTVRIWDIRKPKPAITV-KAHTADVNVISWSRNVEYLLVSGCDDGS---FRVWDLRAF 372
Query: 252 NTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP-AGTNWN 310
SPV +F HT + ++ W P + S ++ + D++ WD E E A N +
Sbjct: 373 KDNSPVSDFKYHTGPITSIEWNPYEESQVIVSSSDDQVTIWDFSLEEDTEEFTNANANPD 432
Query: 311 FDIHWYPKI 319
D + P++
Sbjct: 433 DDFQYPPQL 441
Score = 62 (26.9 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 312 DIHWYPKIPGVISASSFDG 330
++HW+P+IP V ++S DG
Sbjct: 453 EVHWHPQIPHVAISTSIDG 471
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 197 (74.4 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 53/176 (30%), Positives = 83/176 (47%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H+ GL ++SF L SG+ D IC+WD+SA A P+ Q I
Sbjct: 165 LMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVY-EGHQSIIED 223
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESI-KRRCSVLQWNPDVATQLVVAS 237
V+W+ K ++I S + V+WDL+ + + + +R + L +NP L AS
Sbjct: 224 VAWHMKNENIFGSAGDDCQLVIWDLRTNQ--MQHQVKVHEREINYLSFNPFNEWVLATAS 281
Query: 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
DS+ AL +D+R +P+ H V + W PN + L + +D R + WD
Sbjct: 282 S-DSTVAL--FDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWD 334
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 57/256 (22%), Positives = 106/256 (41%)
Query: 52 DRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETG 111
D DL L+G E + LAW F G + G D I +W+ +S ++ +
Sbjct: 160 DPDLRLMGHE--QEGYG-LAWSS-------FKEGYLLSGSQDQRICLWD-VSATATDKVL 208
Query: 112 GNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSA 171
NP+ + H+ + + ++ N+ S DD ++ IWDL + H +
Sbjct: 209 -NPMHVY-EGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN-QMQHQVKVH----- 260
Query: 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231
+ EI+++S+N + +LA+ S + T ++DL+K + + ++W+P+ T
Sbjct: 261 -EREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHET 319
Query: 232 QLVVASDEDSSPALRLWDMRNTMSPVKEFV---------------GHTKGVIAMSWCPND 276
L +S ED L +WD+ E GH + +W ++
Sbjct: 320 VLA-SSGEDRR--LMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDE 376
Query: 277 SSYLLTCAKDNRTICW 292
+ + A+DN W
Sbjct: 377 PWVISSVAEDNSLQVW 392
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 195 (73.7 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 50/185 (27%), Positives = 91/185 (49%)
Query: 113 NPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAA 172
NP + L H GL ++ F L SG+DD +IC+WD++A + + A
Sbjct: 169 NPDLK-LRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQ-IFKAH 226
Query: 173 QGEISFVSWNSKVQHILASTSYNGTTVVWDLKK---QKPVISF-SESIKRRCSVLQWNPD 228
+G + V+W+ + +++ S + ++WDL+ KPV S + S++ C L +NP
Sbjct: 227 EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNC--LAFNP- 283
Query: 229 VATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ VVA+ + ++L+D+R + + F H + V + W P + + L +C R
Sbjct: 284 -FNEWVVATGS-TDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRR 341
Query: 289 TICWD 293
+ WD
Sbjct: 342 LMVWD 346
Score = 139 (54.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 73/305 (23%), Positives = 125/305 (40%)
Query: 4 IKGINRSASV---AFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE 60
I+ IN V + P P++ A A F S + LD DL L G
Sbjct: 119 IQQINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNP-DLKLRGH 177
Query: 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS 120
S SE + L+W K F G + G D I +W+ + + +
Sbjct: 178 S--SEGYG-LSWSK-------FKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIF---K 224
Query: 121 RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVS 180
H+G V + ++ L S DD + IWDL +P+ P++ + A E++ ++
Sbjct: 225 AHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASK---PVQ-SVVAHSMEVNCLA 280
Query: 181 WNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED 240
+N + ++A+ S + T ++DL+K + +S K + WNP T ++AS
Sbjct: 281 FNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNET--ILASC-C 337
Query: 241 SSPALRLWDM-----RNTMSPVKE------FV--GHTKGVIAMSWCPNDSSYLLTCAKDN 287
L +WD+ T+ ++ F+ GHT + SW P + + + A+DN
Sbjct: 338 LGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDN 397
Query: 288 RTICW 292
W
Sbjct: 398 ILQIW 402
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 171 (65.3 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 55/206 (26%), Positives = 99/206 (48%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H V L + LLA+G DD + +W ++ +P+ L G+ S + V
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSIN---KPNCIMSLTGHTSPVES----VRL 71
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N+ + I+A S +G+ VWDL+ K + + CS L ++P + V + +D+
Sbjct: 72 NTPEELIVAG-SQSGSIRVWDLEAAKILRTLMGHKANICS-LDFHP--YGEFVASGSQDT 127
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301
+ ++LWD+R V + GH++ V + + P D +L + A D+ WD +G+++S
Sbjct: 128 N--IKLWDIRRK-GCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 302 ELPAGTNWNFDIHWYPKIPGVISASS 327
E P T + ++P + S SS
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSS 209
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 170 (64.9 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 51/192 (26%), Positives = 93/192 (48%)
Query: 116 IAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGE 175
+ + H V L + LLA+G DD + +W ++ +P+ L G+ S +
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSIN---KPNCIMSLTGHTSPVES- 72
Query: 176 ISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVV 235
V N+ + I+A S +G+ VWDL+ K + + CS L ++P + V
Sbjct: 73 ---VRLNTPEELIVAG-SQSGSIRVWDLEAAKILRTLMGHKANICS-LDFHP--YGEFVA 125
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295
+ +D++ ++LWD+R V + GH++ V + + P D +L + A D+ WD
Sbjct: 126 SGSQDTN--IKLWDIRRK-GCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLT 181
Query: 296 SGEIVSELPAGT 307
+G+++SE P T
Sbjct: 182 AGKMMSEFPGHT 193
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/168 (28%), Positives = 81/168 (48%)
Query: 116 IAHLSRHKGPVRGLEFNSFTPN-LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQG 174
I L+ H PV + N TP L+ +G+ G I +WDL A L G+ +
Sbjct: 60 IMSLTGHTSPVESVRLN--TPEELIVAGSQSGSIRVWDLEAA---KILRTLMGH----KA 110
Query: 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF-SESIKRRCSVLQWNPDVATQL 233
I + ++ + + AS S + +WD++++ V + S RC L+++PD L
Sbjct: 111 NICSLDFHPYGEFV-ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC--LRFSPD-GKWL 166
Query: 234 VVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLL 281
A+D+ + ++LWD+ + EF GHT V + + PN+ YLL
Sbjct: 167 ASAADDHT---VKLWDL-TAGKMMSEFPGHTGPVNVVEFHPNE--YLL 208
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 189 (71.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 50/170 (29%), Positives = 83/170 (48%)
Query: 128 GLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL---RGNGSAAQGEISFVSWNSK 184
GL ++ F L SG+ D +IC+WD+SA + + G+ SA I+ VSW+ K
Sbjct: 173 GLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESA----IADVSWHMK 228
Query: 185 VQHILASTSYNGTTVVWDLKKQKPVISFSESI-KRRCSVLQWNPDVATQLVVASDEDSSP 243
+++ S +G V+WD + + + + +R + L +NP L AS DS+
Sbjct: 229 NENLFGSAGEDGRLVIWDTRTNQ--MQHQVKVHEREVNYLSFNPFNEWVLATASS-DSTV 285
Query: 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
AL +D+R +P+ H V + W PN + L + +D R + WD
Sbjct: 286 AL--FDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWD 333
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 57/256 (22%), Positives = 104/256 (40%)
Query: 52 DRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETG 111
D DL LVG E + L+W F G + G D I +W+ +S +
Sbjct: 159 DPDLRLVGHD--KEGYG-LSWSP-------FKEGYLLSGSQDQKICLWD-VSATPQDKVL 207
Query: 112 GNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSA 171
N + + H+ + + ++ NL S +DG + IWD + + H +
Sbjct: 208 -NAMFVY-EGHESAIADVSWHMKNENLFGSAGEDGRLVIWD-TRTNQMQHQVKVH----- 259
Query: 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231
+ E++++S+N + +LA+ S + T ++DL+K + S + ++W+P+ T
Sbjct: 260 -EREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHET 318
Query: 232 QLVVASDEDSSPALRLWDMRNTMSPVKEFV---------------GHTKGVIAMSWCPND 276
L +S ED L +WD+ E GH + +W N+
Sbjct: 319 VLA-SSGEDRR--LMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNE 375
Query: 277 SSYLLTCAKDNRTICW 292
+ + A+DN W
Sbjct: 376 PWVIASVAEDNSLQVW 391
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 195 (73.7 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 56/219 (25%), Positives = 108/219 (49%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H G V L T LL +G DD ++ +W + P L G+ S + V++
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMS---LCGHTSP----VDSVAF 66
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
NS+ +LA S +G +WDL++ K V +F+ + CS ++++P + + + D+
Sbjct: 67 NSEEVLVLAGAS-SGVIKLWDLEESKMVRAFTGH-RSNCSAVEFHP--FGEFLASGSSDT 122
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301
+ LR+WD R ++ + GHT+G+ + + P D ++++ DN WD +G+++
Sbjct: 123 N--LRVWDTRKK-GCIQTYKGHTRGISTIEFSP-DGRWVVSGGLDNVVKVWDLTAGKLLH 178
Query: 302 ELPA--GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
E G + D H P + +++ S D + +++E
Sbjct: 179 EFKCHEGPIRSLDFH--P-LEFLLATGSADRTVKFWDLE 214
Score = 126 (49.4 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 60/215 (27%), Positives = 96/215 (44%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD 145
L+ GG D +++W S G+T +P+ L H PV + FNS +LA GA
Sbjct: 31 LLTGG-DDYKVNLW------SIGKTT-SPM--SLCGHTSPVDSVAFNSEEVLVLA-GASS 79
Query: 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK 205
G I +WDL F R N SA + F + LAS S + VWD +K
Sbjct: 80 GVIKLWDLEESKMVRAFTGHRSNCSA----VEFHPFGE----FLASGSSDTNLRVWDTRK 131
Query: 206 QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTK 265
K I + R S ++++PD + VV+ D+ +++WD+ + EF H
Sbjct: 132 -KGCIQTYKGHTRGISTIEFSPD--GRWVVSGGLDN--VVKVWDL-TAGKLLHEFKCHEG 185
Query: 266 GVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV 300
+ ++ + P + L T + D WD + E++
Sbjct: 186 PIRSLDFHPLEF-LLATGSADRTVKFWDLETFELI 219
Score = 49 (22.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 472 NFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQ--YQQPTL 509
N T+ P P+T QPA P P +L A Y +P++
Sbjct: 669 NVTSDEP-PLT-QPARTSSFPVMPVILNQASNVTYDEPSV 706
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 187 (70.9 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 57/223 (25%), Positives = 113/223 (50%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H V L + LLA+G +D + IW +S +P+ L G+ SA G I F
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVS---KPNCIMSLTGHTSAV-GCIQF--- 71
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
NS + ++A S +G+ +WDL+ K ++ K S L ++P + + + DS
Sbjct: 72 NSSEERVVAG-SLSGSLRLWDLEAAK-ILRTLMGHKASISSLDFHP--MGEYLASGSVDS 127
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301
+ ++LWD+R V + GHT+ V +++ P D +L + + D+ WD ++G++++
Sbjct: 128 N--IKLWDVRRK-GCVFRYKGHTQAVRCLAFSP-DGKWLASASDDSTVKLWDLIAGKMIT 183
Query: 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344
E + T+ + ++P ++++ S D + ++++E + G
Sbjct: 184 EFTSHTSAVNVVQFHPN-EYLLASGSADRTVKLWDLEKFNMIG 225
Score = 52 (23.4 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 31/116 (26%), Positives = 41/116 (35%)
Query: 454 YQPAPQPGLFIPPQATQPNFTAPAPAPVT---SQPAMR---PFIPSTPPVLRNAEQYQQP 507
Y+ QP I T P T P PAP+ S+ + P + PV+ A Q + P
Sbjct: 387 YKEIFQPRSVI--SRTPPKTTEPFPAPLEHSFSESVLEKPGPVVKIVTPVIDRAGQLKGP 444
Query: 508 TLGSQLYPGVSNPGYPVPPVSDARGSLPSQI--GAVPGPKMPNVVAPTPTP-TGFM 560
S P V P A P + + P P V P P TG +
Sbjct: 445 ITSS-------TPVQRVEPTVIAAAPRPVAVVTTSASSPSRPVVNTTKPKPSTGII 493
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 178 (67.7 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 56/217 (25%), Positives = 106/217 (48%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H V L + LLA+G DD + +W ++ +P+ L G+ S + V
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSIN---KPNCIMSLTGHTSPVES----VRL 71
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N+ + I+A S +G+ VWDL+ K + + CS L ++P + V + +D+
Sbjct: 72 NTPEELIVAG-SQSGSIRVWDLEAAKILRTLMGHKANICS-LDFHP--YGEFVASGSQDT 127
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301
+ ++LWD+R V + GH++ V + + P D +L + A D+ WD +G+++S
Sbjct: 128 N--IKLWDIRRK-GCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
E P T + ++P ++++ S D I +++E
Sbjct: 184 EFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLE 219
Score = 60 (26.2 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 27/77 (35%), Positives = 34/77 (44%)
Query: 498 LRNAEQYQ---QPTLG-SQLYPGVSNPGYPVPPVSDA----RGSLPS-----QIGAVPG- 543
++NAE Y QP S+ P S P +P PP D S PS Q+ VP
Sbjct: 376 IQNAEDYNEIFQPKNSISRTPPRRSEP-FPAPPEDDIATAKEASKPSPAMDVQL-PVPSQ 433
Query: 544 --PKMPNVVAPTPTPTG 558
P P+V+ TP P G
Sbjct: 434 EVPARPSVMTSTPAPKG 450
Score = 42 (19.8 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 465 PPQ---ATQPNFTAPAPAPVTSQPAMRPFIPSTPPVL 498
PP+ AT + P+PA P +P+ P V+
Sbjct: 406 PPEDDIATAKEASKPSPAMDVQLPVPSQEVPARPSVM 442
Score = 42 (19.8 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 491 IPSTPPVLRNAEQYQQPT---LGSQLYPGVSNPGYPVP-PV-SDARGSLPSQIGAVPGPK 545
I TPP R +E + P + + +P V PV S + PS + + P PK
Sbjct: 392 ISRTPP--RRSEPFPAPPEDDIATAKEASKPSPAMDVQLPVPSQEVPARPSVMTSTPAPK 449
Query: 546 MPNVVAP 552
V+ P
Sbjct: 450 GEPVIIP 456
Score = 38 (18.4 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 465 PPQATQPNFTAPAPAPV-TSQPAMRP 489
PP+ ++P F AP + T++ A +P
Sbjct: 396 PPRRSEP-FPAPPEDDIATAKEASKP 420
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 178 (67.7 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 56/217 (25%), Positives = 106/217 (48%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H V L + LLA+G DD + +W ++ +P+ L G+ S + V
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSIN---KPNCIMSLTGHTSPVES----VRL 71
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N+ + I+A S +G+ VWDL+ K + + CS L ++P + V + +D+
Sbjct: 72 NTPEELIVAG-SQSGSIRVWDLEAAKILRTLMGHKANICS-LDFHP--YGEFVASGSQDT 127
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301
+ ++LWD+R V + GH++ V + + P D +L + A D+ WD +G+++S
Sbjct: 128 N--IKLWDIRRK-GCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
E P T + ++P ++++ S D I +++E
Sbjct: 184 EFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLE 219
Score = 60 (26.2 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 27/74 (36%), Positives = 33/74 (44%)
Query: 498 LRNAEQYQ---QPTLG-SQLYPGVSNPGYPVPPVSDA----RGSLPSQIGAV--PGPKM- 546
++NAE Y QP S+ P S P +P PP DA + PS V P P +
Sbjct: 376 IQNAEDYNEIFQPKNSISRTPPRRSEP-FPAPPEDDAATAKEAAKPSPAMDVQFPVPNLE 434
Query: 547 ----PNVVAPTPTP 556
P VVA TP P
Sbjct: 435 VLPRPPVVASTPAP 448
Score = 47 (21.6 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 17/52 (32%), Positives = 22/52 (42%)
Query: 450 ASAAYQPAPQPGLFIPPQATQPNFTA-PAPAPVTSQPAMRPFIPSTPPVLRN 500
A+A P P + + Q PN P P V S PA + P+ P RN
Sbjct: 412 ATAKEAAKPSPAMDV--QFPVPNLEVLPRPPVVASTPAPKAE-PAIIPATRN 460
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 178 (67.7 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 56/217 (25%), Positives = 106/217 (48%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H V L + LLA+G DD + +W ++ +P+ L G+ S + V
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSIN---KPNCIMSLTGHTSPVES----VRL 71
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N+ + I+A S +G+ VWDL+ K + + CS L ++P + V + +D+
Sbjct: 72 NTPEELIVAG-SQSGSIRVWDLEAAKILRTLMGHKANICS-LDFHP--YGEFVASGSQDT 127
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301
+ ++LWD+R V + GH++ V + + P D +L + A D+ WD +G+++S
Sbjct: 128 N--IKLWDIRRK-GCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
E P T + ++P ++++ S D I +++E
Sbjct: 184 EFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLE 219
Score = 60 (26.2 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 458 PQPGLFIP-PQATQPNFTAPA-PAPVTSQPAMRPFIPSTPPVLRN 500
P P + + PQ PN PA P+ +TS PA + P P RN
Sbjct: 420 PSPAMDVQLPQLPVPNLEVPARPSVMTSTPAPKGE-PDIIPATRN 463
Score = 54 (24.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 23/71 (32%), Positives = 31/71 (43%)
Query: 502 EQYQQPTLGSQLYPGVSNPGYPVPPVSDARG----SLPS-----QIGAVPGPKM-----P 547
E +Q S+ P S P +P PP DA S PS Q+ +P P + P
Sbjct: 384 EIFQPKNSISRTPPRRSEP-FPAPPEDDAATVKEVSKPSPAMDVQLPQLPVPNLEVPARP 442
Query: 548 NVVAPTPTPTG 558
+V+ TP P G
Sbjct: 443 SVMTSTPAPKG 453
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 186 (70.5 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE + HL H+ GL +N + L S +DD IC+WD+SA + +
Sbjct: 164 SGECNSD---LHLRGHQKEGYGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAK 220
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + VSW+ + + S + + ++WD + KP S ++ + L
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAYTAEVNCL 279
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP+ ++ ++AS + LWD+RN + F H + + W P++ + L +
Sbjct: 280 SFNPN--SEFILASGSPDK-TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 337 GTDRRLNVWD 346
Score = 175 (66.7 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 61/230 (26%), Positives = 102/230 (44%)
Query: 93 DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWD 152
D +I +W+ ++ G+ G I + H V + ++ +L S ADD ++ IWD
Sbjct: 199 DHTICLWDISAVPKEGKVVGAKTI--FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWD 256
Query: 153 LSA--PAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVI 210
+ ++PSH + A E++ +S+N + ILAS S + T +WDL+ K +
Sbjct: 257 TRSNNTSKPSH------SVDAYTAEVNCLSFNPNSEFILASGSPDKTVALWDLRNLKLKL 310
Query: 211 SFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNT---MSPVKE-------- 259
ES K +QW+P T ++ +S D L +WD+ SP
Sbjct: 311 HSFESHKDEIFQVQWSPHNET-ILASSGTDRR--LNVWDLSKIGEEQSPEDAEDGPPELL 367
Query: 260 FV--GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT 307
F+ GHT + SW PN+ + + ++DN W E P G+
Sbjct: 368 FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGS 417
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 53/247 (21%), Positives = 105/247 (42%)
Query: 108 GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHFPP-- 164
G G I ++G V + P ++A+ ++ ++D + P++P
Sbjct: 109 GSVSGKIEIEIKINYEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN 168
Query: 165 ----LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIK 217
LRG+ G +SWN + L S S + T +WD+ K+ V+
Sbjct: 169 SDLHLRGHQKEGYG----LSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIFT 224
Query: 218 RRCSVLQWNPDVATQLVVASDEDS---SPALRLWDMR--NTMSPVKEFVGHTKGVIAMSW 272
+V++ DV+ L+ S S L +WD R NT P +T V +S+
Sbjct: 225 GHTAVVE---DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSF 281
Query: 273 CPNDSSYLLTCAKDNRTIC-WDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDG 330
PN S ++L ++T+ WD + ++ + + + F + W P ++++S D
Sbjct: 282 NPN-SEFILASGSPDKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 340
Query: 331 KIGIYNI 337
++ ++++
Sbjct: 341 RLNVWDL 347
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 179 (68.1 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 53/230 (23%), Positives = 99/230 (43%)
Query: 110 TGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNG 169
+GG P I H V +++N T + +G+ D I IW+ P R +
Sbjct: 92 SGGRP-IKSFEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIWN---PRMDRSLKTFREHR 147
Query: 170 SAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDV 229
I W+ + H+ AS S + T +WD + + + + ++ WN
Sbjct: 148 YCIYSAI----WSPRNAHLFASVSGDRTLKIWDSRDNRSLNTI-KAHDHEILTCDWNKYN 202
Query: 230 ATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRT 289
++V S + + +R+WD+R P GHT V + P+ S L +C+ D
Sbjct: 203 DKEVVTGSVDKT---IRIWDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSV 259
Query: 290 ICWDTVSGE--IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
I WD + I++ + T + + W I G +++ S+D ++ ++N+
Sbjct: 260 IVWDRAREQDPIIARMDHHTEFVVGLDWNMFIDGQMASCSWDEQVCVWNL 309
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 39/157 (24%), Positives = 70/157 (44%)
Query: 139 LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198
+AS + DG I IWD AP S P++ + E+ V WN + + S++ +
Sbjct: 74 VASSSGDGSIKIWDTQAP---SGGRPIKSFEEHTK-EVYSVDWNLVTKDTFITGSWDQSI 129
Query: 199 VVWDLKKQKPVISFSESIKRRC--SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSP 256
+W+ + + + +F E R C S + W+P A L + D + L++WD R+ S
Sbjct: 130 KIWNPRMDRSLKTFREH--RYCIYSAI-WSPRNA-HLFASVSGDRT--LKIWDSRDNRS- 182
Query: 257 VKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
+ H ++ W + ++T + D WD
Sbjct: 183 LNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWD 219
Score = 117 (46.2 bits), Expect = 0.00074, P = 0.00074
Identities = 39/162 (24%), Positives = 72/162 (44%)
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVLQWNPDVATQLVVA 236
+W+ + + +AS+S +G+ +WD + +P+ SF E K SV WN V +
Sbjct: 65 TWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSV-DWNL-VTKDTFIT 122
Query: 237 SDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWDTV 295
D S +++W+ R S +K F H + + W P ++ +L +RT+ WD+
Sbjct: 123 GSWDQS--IKIWNPRMDRS-LKTFREHRYCIYSAIWSPRNA-HLFASVSGDRTLKIWDSR 178
Query: 296 SGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
++ + A + W + S D I I++I
Sbjct: 179 DNRSLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDI 220
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 181 (68.8 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 118/500 (23%), Positives = 193/500 (38%)
Query: 113 NPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAA 172
N + + + H+ VR L F T S +DD + +WD + E L G+G
Sbjct: 39 NNVKVNKTAHRESVRDLSFCR-TDLKFCSCSDDTTVKVWDFARCQEERS---LTGHG--- 91
Query: 173 QGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQ 232
++ V W+ + +L S + +WD K + + SF K ++WN +
Sbjct: 92 -WDVKSVDWHP-TKSLLVSGGKDYLVKLWDAKSGRELRSF-HGHKNIVQCVKWNQNGNWV 148
Query: 233 LVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
L + D+ ++L+D+R+ M ++ F GH K V A++W P Y ++ + D W
Sbjct: 149 LTASKDQ----IIKLYDIRS-MKELESFRGHNKDVTALAWHPFHEEYFVSGSYDGAIFHW 203
Query: 293 DTVSGEIVS-ELP-AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNF 350
V E E+ A N +D+ W+P + ++ + D + C R GD
Sbjct: 204 -LVGHETPQIEINNAHDNSVWDLAWHP-VGYLLCSGGNDHATRFW----C-RNRPGDLTR 256
Query: 351 SAAPLRAPKWY--KRPAGASFGFGGKLVSFHPKSSAG--HTSENSQHAPVHGVDQSKYGM 406
+ Y + PA A GG + P ++ G +T + + G+ +
Sbjct: 257 DKYNSGQMQGYGDQHPAFAGRAMGGFQMP-EPSTTPGPFNTGLSRNEGTIPGIGVAM--P 313
Query: 407 VDSSQQYYQEPVQSPLHQSVPGGTYGDNYQQPL--GPYSNGRGYGASAAYQPAPQ--PGL 462
+D S Q P S+PG G Q PL GP+ + G YQ Q P
Sbjct: 314 LDGSDHGEQRP-------SIPGLPPG---QPPLPPGPHPSLLAGGQQQQYQQMQQQHPQF 363
Query: 463 FIPPQATQPNFTAPA---P------APVTSQPAMR---PFIPSTPPV-------LRNAEQ 503
PP P PA P AP+ P+M P P PP+ ++ +
Sbjct: 364 PRPPPPNMPQLQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSN 423
Query: 504 YQQPTLGSQLYPGVSNPGYPVPPVS-DARGSLPSQIGAVPGPKMPNVVAPTPT------P 556
P + L G+ N + PP + G P+ +G + G + + P P
Sbjct: 424 QMMPQMPQHLI-GM-NQTHQGPPSNMPPMGGFPNGMGNIQGGSSASGMQNFPMGGMYNRP 481
Query: 557 TGFMPMSGSG-VVQRPGMGS 575
G MP + PG+ S
Sbjct: 482 QGKMPPQAQAQMTSIPGLSS 501
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 178 (67.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 53/196 (27%), Positives = 84/196 (42%)
Query: 100 NPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEP 159
+PL G+ N L+ HK G+ +N L S +DD IC+WD+SA ++
Sbjct: 154 HPLEPTPDGKCSPN---LKLTGHKKEGYGISWNPRKEGHLLSCSDDQSICMWDISAASKS 210
Query: 160 -SHFPPLR-GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIK 217
S L NG + + V+W+ S + ++WD + I E+
Sbjct: 211 DSTLDALNIYNGHTSI--VEDVAWHYIHDTFFGSVGDDKKLMIWDTRTGTKPIHVVEAHN 268
Query: 218 RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDS 277
+ L +NP LV D + AL WDMRN + + + HT V + + P++
Sbjct: 269 SEVNCLSFNP-FCEFLVATGSTDKTVAL--WDMRNLGNRLHSLISHTDEVFQVQFSPHNE 325
Query: 278 SYLLTCAKDNRTICWD 293
+ L +C D R WD
Sbjct: 326 TVLASCGSDRRVNVWD 341
Score = 122 (48.0 bits), Expect = 0.00035, P = 0.00035
Identities = 52/217 (23%), Positives = 97/217 (44%)
Query: 93 DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWD 152
D SI +W+ +S S ++ + L + + H V + ++ S DD ++ IWD
Sbjct: 196 DQSICMWD-ISAASKSDSTLDALNIY-NGHTSIVEDVAWHYIHDTFFGSVGDDKKLMIWD 253
Query: 153 LSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK----KQKP 208
+P H A E++ +S+N + ++A+ S + T +WD++ +
Sbjct: 254 TRTGTKPIHVV------EAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRNLGNRLHS 307
Query: 209 VISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDM------RNTMS-----PV 257
+IS ++ + + +Q++P T V+AS S + +WD+ +N P
Sbjct: 308 LISHTDEVFQ----VQFSPHNET--VLASC-GSDRRVNVWDLSRIGEEQNNEDAADGPPE 360
Query: 258 KEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
F+ GHT + SW PND + + A+DN W
Sbjct: 361 LLFIHGGHTSKISDFSWNPNDPWSIASVAEDNILQIW 397
>CGD|CAL0003130 [details] [associations]
symbol:orf19.7185 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 178 (67.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 48/170 (28%), Positives = 83/170 (48%)
Query: 128 GLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQH 187
G+ + N SG++D +I +W + + P +G+ G I+ +S + K +H
Sbjct: 216 GIALDWVDNNGFLSGSNDAQIALWQVDKSSTPLQL--FKGH----HGAINDIS-SIKEKH 268
Query: 188 ILASTSYNGTTVVWDLKKQ----KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243
+ S S + TT D + PVI+ S + C +Q++PD+ T L +D+
Sbjct: 269 LFGSVSDDSTTQFHDTRVNATDINPVITVENSHIQNC--IQFHPDIQT-LYATGGKDN-- 323
Query: 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
+ L+D+RN +P ++F GH V + W N+ L++C D R I WD
Sbjct: 324 VVSLYDIRNYSTPFRKFYGHNDSVRQLQWDWNNPDILVSCGLDKRIIFWD 373
>UNIPROTKB|Q5A0B0 [details] [associations]
symbol:CaO19.7185 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 178 (67.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 48/170 (28%), Positives = 83/170 (48%)
Query: 128 GLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQH 187
G+ + N SG++D +I +W + + P +G+ G I+ +S + K +H
Sbjct: 216 GIALDWVDNNGFLSGSNDAQIALWQVDKSSTPLQL--FKGH----HGAINDIS-SIKEKH 268
Query: 188 ILASTSYNGTTVVWDLKKQ----KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243
+ S S + TT D + PVI+ S + C +Q++PD+ T L +D+
Sbjct: 269 LFGSVSDDSTTQFHDTRVNATDINPVITVENSHIQNC--IQFHPDIQT-LYATGGKDN-- 323
Query: 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
+ L+D+RN +P ++F GH V + W N+ L++C D R I WD
Sbjct: 324 VVSLYDIRNYSTPFRKFYGHNDSVRQLQWDWNNPDILVSCGLDKRIIFWD 373
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 176 (67.0 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 51/194 (26%), Positives = 90/194 (46%)
Query: 103 SLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF 162
S S+ E+ P L++H P + +N + L SG+ D + WDL+A E
Sbjct: 165 SYSSASESPLKPKY-RLTKHTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSA 223
Query: 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSV 222
L+ + S+ + ++S V ++ K Q +LAS SY+ V D+++ + S+
Sbjct: 224 SVLKVHISSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGP 283
Query: 223 LQ---WNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSY 279
+ +NP L S + + + LWD+RN + GH V +S+ P++
Sbjct: 284 IHSVAFNPHNDFILATCSTDKT---IALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPI 340
Query: 280 LLTCAKDNRTICWD 293
L + + D RT+ WD
Sbjct: 341 LASTSADRRTLVWD 354
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 58/223 (26%), Positives = 100/223 (44%)
Query: 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142
S G + G D ++ W+ L+ + ++ + L H+S H+ V + F+ +LLAS
Sbjct: 196 SKGTLVSGSQDATLSCWD-LNAYNESDSA-SVLKVHISSHEKQVSDVRFHYKHQDLLASV 253
Query: 143 ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWD 202
+ D + + D+ P + P R + A G I V++N ILA+ S + T +WD
Sbjct: 254 SYDQYLHVHDIRRPDASTK--PAR-SVHAHSGPIHSVAFNPHNDFILATCSTDKTIALWD 310
Query: 203 LKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS--PVKE- 259
L+ + E + + + ++P + ++AS L +WD+ P +E
Sbjct: 311 LRNLNQRLHTLEGHEDIVTKISFSPH--EEPILASTSADRRTL-VWDLSRIGEDQPAEEA 367
Query: 260 --------FV--GHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
F+ GHT I M WCPN + + T A+DN W
Sbjct: 368 QDGPPELLFMHGGHTSCTIDMDWCPNYNWTMATAAEDNILQIW 410
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 178 (67.7 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 56/217 (25%), Positives = 106/217 (48%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H V L + LLA+G DD + +W ++ +P+ L G+ S + V
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSIN---KPNCIMSLTGHTSPVES----VRL 71
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N+ + I+A S +G+ VWDL+ K + + CS L ++P + V + +D+
Sbjct: 72 NTPEELIVAG-SQSGSIRVWDLEAAKILRTLMGHKANICS-LDFHP--YGEFVASGSQDT 127
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301
+ ++LWD+R V + GH++ V + + P D +L + A D+ WD +G+++S
Sbjct: 128 N--IKLWDIRRK-GCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
E P T + ++P ++++ S D I +++E
Sbjct: 184 EFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLE 219
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 178 (67.7 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 56/217 (25%), Positives = 106/217 (48%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H V L + LLA+G DD + +W ++ +P+ L G+ S + V
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSIN---KPNCIMSLTGHTSPVES----VRL 71
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N+ + I+A S +G+ VWDL+ K + + CS L ++P + V + +D+
Sbjct: 72 NTPEELIVAG-SQSGSIRVWDLEAAKILRTLMGHKANICS-LDFHP--YGEFVASGSQDT 127
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301
+ ++LWD+R V + GH++ V + + P D +L + A D+ WD +G+++S
Sbjct: 128 N--IKLWDIRRK-GCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
E P T + ++P ++++ S D I +++E
Sbjct: 184 EFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLE 219
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 173 (66.0 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 63/266 (23%), Positives = 111/266 (41%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +NS L S +DD +C+WD+SA + +
Sbjct: 162 SGEC--NPDL-RLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAK 218
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + V+W+ + + S + + ++WD + KP S ++ + L
Sbjct: 219 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSV-DAHTAEVNCL 277
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 278 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASS 334
Query: 284 AKDNRTICWDTV------SGEIVSELP-------AGTNWNF-DIHWYPKIPGVISASSFD 329
D R WD S E + P G D W P P VI + S D
Sbjct: 335 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 394
Query: 330 GKIGIYNIEGCSRYGVGDSNFSAAPL 355
+ I+ + + Y + + +AA L
Sbjct: 395 NIMQIWQMAE-NIYNDEEPDIAAAEL 419
Score = 159 (61.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 55/230 (23%), Positives = 102/230 (44%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF----PPLRGNGSAAQGEI 176
H+G V + P ++A+ ++ ++D + P++P P LR G +G
Sbjct: 121 HEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY- 179
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVATQL 233
+SWNS ++ L S S + T +WD+ K+ ++ +V++ DVA L
Sbjct: 180 -GLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVE---DVAWHL 235
Query: 234 VVASDEDS---SPALRLWDMR-NTMS-PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ S S L +WD R NT S P HT V +S+ P L T + D
Sbjct: 236 LHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 295
Query: 289 TICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + ++ + + + F +HW P ++++S D ++ ++++
Sbjct: 296 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 345
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 177 (67.4 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 58/213 (27%), Positives = 97/213 (45%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
HK +RG+ F+ T + SG+DDG + IWD E LRG+G+ ++ V W
Sbjct: 228 HKEAIRGISFSP-TDSKFVSGSDDGTLRIWDFMRCQEER---VLRGHGA----DVKCVHW 279
Query: 182 NSKVQHILASTSYNGTTV-VWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED 240
+ + I++ + N + +WD K ++ + K L+WN D LV AS +
Sbjct: 280 HPQKGMIVSGSKDNQQPIKIWD-PKSGIALATLHAHKSTVMDLKWN-DNGNWLVTASRDH 337
Query: 241 SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDT-VSGEI 299
L+L+D+RN V+ F GH K ++SW P + D + W+ EI
Sbjct: 338 ---LLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEI 394
Query: 300 VSELPAGTNWNFDIHWYPKIPGVISASSFDGKI 332
A + + + W+P + ++ + S D I
Sbjct: 395 GCVETAHDSIVWTLAWHP-LGHILCSGSNDHTI 426
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 173 (66.0 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 60/264 (22%), Positives = 120/264 (45%)
Query: 94 GSIDIWNPLSLIS-----SGE--TGGNPLIAHLSRHKGPVR---GLEFNSFTPNLLASGA 143
G + +WN ++ SGE T + L + G + GL ++S LA+G
Sbjct: 189 GRVQVWNITDALNYTHGMSGESKTEVQKIDRPLFTNNGSGKEGYGLAWSSLKTGDLATGD 248
Query: 144 DDGEICIWDLSAPAEPS-HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWD 202
+I +W + + + PL G+ + + ++W+ +LAS S +G+ +WD
Sbjct: 249 IIKKIYLWQMKEGGQWAVGANPLTGHKKSVED----LAWSPTETGLLASCSADGSIKLWD 304
Query: 203 LK---KQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM--SPV 257
+ K V + ++ + +V+ WN L+V+ +D L++W ++ PV
Sbjct: 305 TRSAPKDACVCTVQKAHESDVNVISWNRH--ENLIVSGGDDGE--LKIWSLKTIQFGQPV 360
Query: 258 KEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS---GEI-VSELPA-------G 306
F H + ++ W P++++ + +D++T WD + G+ + +P G
Sbjct: 361 ALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWDIATEADGQTNIEGVPPQLMFVHMG 420
Query: 307 TNWNFDIHWYPKIPGVISASSFDG 330
N ++HW+ +IPG+ +S DG
Sbjct: 421 QNEVKEVHWHQQIPGLAINTSIDG 444
Score = 156 (60.0 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 58/201 (28%), Positives = 95/201 (47%)
Query: 59 GESPSS-ERFNRLAWGKNGSGSEDFSLG---LVAGGLVDGSIDIWNPLSLISSGETGGNP 114
GES + ++ +R + NGSG E + L L G L G DI + L E G
Sbjct: 208 GESKTEVQKIDRPLFTNNGSGKEGYGLAWSSLKTGDLATG--DIIKKIYLWQMKEGGQWA 265
Query: 115 LIAH-LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDL-SAPAEPSHFPPLRGNGSAA 172
+ A+ L+ HK V L ++ LLAS + DG I +WD SAP + + A
Sbjct: 266 VGANPLTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQK----AH 321
Query: 173 QGEISFVSWNSKVQHILASTSYNGTTVVWDLKK-Q--KPVISFSESIKRRCSVLQWNPDV 229
+ +++ +SWN + ++++ S +G +W LK Q +PV F SV W+P
Sbjct: 322 ESDVNVISWN-RHENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSV-DWHPHE 379
Query: 230 ATQLVVASDEDSSPALRLWDM 250
T + + ++D + +WD+
Sbjct: 380 TTTFMASGEDDQTT---IWDI 397
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 170 (64.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 56/211 (26%), Positives = 104/211 (49%)
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
+ + +RGL F+ T LAS ADD I IWD + E + L G+G ++ V
Sbjct: 206 AHEQSKIRGLSFSP-TDLKLASCADDKIIKIWDFARCTEDNQ---LVGHG----WDVKCV 257
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDE 239
SW+ + + ++ S + +WD K + + + K S ++WN + +V AS
Sbjct: 258 SWHPQ-KSLIVSGGKDNNIKIWDAKSSQNITTL-HGHKSTVSKVEWNQN-GNWIVSAS-- 312
Query: 240 DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI 299
S L+++D+R TM ++ F GH K V A++ P ++ KD + + W + E
Sbjct: 313 -SDQLLKVFDIR-TMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILYWIVGNPEP 370
Query: 300 VSELPAGTNWN-FDIHWYPKIPGVISASSFD 329
+E+ + + + + + W+P I ++++ S D
Sbjct: 371 QAEIHSAHDADVWSLSWHP-IGHILASGSND 400
Score = 124 (48.7 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 59/244 (24%), Positives = 102/244 (41%)
Query: 97 DIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN--LLASGADDGEICIWD-L 153
+I P++L S+ T H S +K + S+TP L +G+ GE +W+ L
Sbjct: 97 EILPPIALESNPITSVCSRFIHTSSNKVKYP-INCVSWTPEGRRLVTGSSSGEFTLWNGL 155
Query: 154 SAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS 213
+ E L+ + SA + I W+ + + S +G W I F
Sbjct: 156 TFNFETI----LQAHDSAVRSII----WSHN-EDWMVSGDDSGNIKYWQPNMNNVKI-FK 205
Query: 214 ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWC 273
+ + L ++P T L +AS D +++WD + VGH V +SW
Sbjct: 206 AHEQSKIRGLSFSP---TDLKLASCADDK-IIKIWDFARCTED-NQLVGHGWDVKCVSWH 260
Query: 274 PNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333
P S +++ KDN WD S + ++ L + + W ++SASS D +
Sbjct: 261 PQ-KSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASS-DQLLK 318
Query: 334 IYNI 337
+++I
Sbjct: 319 VFDI 322
Score = 53 (23.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 28/109 (25%), Positives = 38/109 (34%)
Query: 411 QQYYQEPVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIP--PQA 468
QQ Q+P+Q P Q +P QQP + QP QP F P P
Sbjct: 551 QQPIQQPMQQPQQQQIPQNI-PQQMQQP--QQQQQQQQQQQQQQQPL-QPQQFQPKPPYQ 606
Query: 469 TQPN-FTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQ-QPTLGSQLYP 515
+P F+ + + F P+ N +Q Q P Q P
Sbjct: 607 QRPQQFSQQQQQQQFNPNQQQQFNPNQQQFNPNQQQQQFNPNQQQQFNP 655
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 49/191 (25%), Positives = 88/191 (46%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFN-SFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165
SGE NP + L H+ GL +N + + NLL S +DD IC+WD+SA +
Sbjct: 164 SGEC--NPNL-RLRGHQKEGYGLSWNPNLSGNLL-SASDDHTICLWDISAVPKEGKVVDA 219
Query: 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSV 222
+ + + VSW+ + + S + + ++WD + KP S ++ +
Sbjct: 220 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNC 278
Query: 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLT 282
L +NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 279 LSFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS 335
Query: 283 CAKDNRTICWD 293
D R WD
Sbjct: 336 SGTDRRLNVWD 346
Score = 161 (61.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 62/238 (26%), Positives = 107/238 (44%)
Query: 70 LAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGL 129
L+W N SG+ L++ D +I +W+ ++ G+ I + H V +
Sbjct: 183 LSWNPNLSGN------LLSAS-DDHTICLWDISAVPKEGKVVDAKTI--FTGHTAVVEDV 233
Query: 130 EFNSFTPNLLASGADDGEICIWDLSA--PAEPSHFPPLRGNGSAAQGEISFVSWNSKVQH 187
++ +L S ADD ++ IWD + ++PSH + A E++ +S+N +
Sbjct: 234 SWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSH------SVDAHTAEVNCLSFNPYSEF 287
Query: 188 ILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRL 247
ILA+ S + T +WDL+ K + ES K +QW+P T ++ +S D L +
Sbjct: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET-ILASSGTDRR--LNV 344
Query: 248 WDMRNT---MSPVKE--------FV--GHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
WD+ SP F+ GHT + SW PN+ + + ++DN W
Sbjct: 345 WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 141 (54.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 55/244 (22%), Positives = 100/244 (40%)
Query: 108 GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF---- 162
G G I H G V + P ++A+ ++ ++D + P++P
Sbjct: 109 GSVSGKIEIEIKITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECN 168
Query: 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRR 219
P LR G +G +SWN + L S S + T +WD+ K+ V+
Sbjct: 169 PNLRLRGHQKEGY--GLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 220 CSVLQWNPDVATQLVVASDEDS---SPALRLWDMR--NTMSPVKEFVGHTKGVIAMSWCP 274
+V++ DV+ L+ S S L +WD R NT P HT V +S+ P
Sbjct: 227 TAVVE---DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
Query: 275 NDSSYLLTCAKDNRTICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333
L T + D WD + ++ + + + F + W P ++++S D ++
Sbjct: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 334 IYNI 337
++++
Sbjct: 344 VWDL 347
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 166 (63.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 71/273 (26%), Positives = 121/273 (44%)
Query: 47 DFQSEDRDLLLVGESPSSE-RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWN--P-- 101
D + D +L +S S++ NR+ + + S SL +A G + IW+ P
Sbjct: 164 DNSDVEEDPILEHKSISTKGACNRVRSARRPANSSKESL--LASFHETGKVHIWDIAPHL 221
Query: 102 LSLISSG----ETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPA 157
SL S G +PL ++RHK L+++ F +LL SG + EI + S
Sbjct: 222 RSLDSPGVMVSRKENSPLYT-VNRHKTEGYALDWSPFEYSLL-SGDNANEIFLTKYSNGG 279
Query: 158 EPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK-KQKP-VISFSES 215
+ P + +A + + W+ +++ +S S +GT +WD++ KQK ++ +
Sbjct: 280 WQTDSSPFLSHTAAVED----LQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNAH 335
Query: 216 IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS------PVKEFVGHTKGVIA 269
+VL WN V L +D +WD+R+ S PV F H + +
Sbjct: 336 PGVDVNVLSWNTRVPNLLATGADNG---VWSVWDLRSLKSSSSVATPVASFKWHRAPIYS 392
Query: 270 MSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSE 302
+ W PN+ S + DN+ WD +S E+ E
Sbjct: 393 IEWHPNEDSVIGVVGADNQISLWD-LSVELDEE 424
Score = 51 (23.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 312 DIHWYPKIPGVISASSFDGKIGIY 335
++HW+ +IPG I +++ G I ++
Sbjct: 453 EMHWHRQIPGTIVSTAMTG-INVF 475
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 170 (64.9 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 44/182 (24%), Positives = 80/182 (43%)
Query: 113 NPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAA 172
NPL+ L H GL +N L+ S +DD +C WD++ A + R
Sbjct: 163 NPLLK-LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGH 221
Query: 173 QGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF-SESIKRRCSVLQWNPDVAT 231
+ + V+W+ + S + ++WDL+ P + + S + C L +NP +
Sbjct: 222 ESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLRTNVPGHAIDAHSAEVNC--LAFNP--YS 277
Query: 232 QLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC 291
+ ++A+ + + LWD+RN + F H + + W P++ + L + D R
Sbjct: 278 EFILATGS-ADKTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHV 336
Query: 292 WD 293
WD
Sbjct: 337 WD 338
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 47/227 (20%), Positives = 95/227 (41%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDL----SAPAEPSHFPPLRGNGSAAQGEIS 177
H+G V + P ++A+ + ++ I+D S P + + P L+ G +G
Sbjct: 119 HEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKYPSVPKDNTFNPLLKLKGHTKEGY-- 176
Query: 178 FVSWNSKVQHILASTSYNGTTVVWDLKKQKPV---ISFSESIKRRCSVLQWNPDVATQLV 234
+SWN + ++ S S + T WD+ + E K SV++ DVA ++
Sbjct: 177 GLSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVE---DVAWHVL 233
Query: 235 ---VASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC 291
V L +WD+R + P H+ V +++ P L T + D
Sbjct: 234 HDGVFGSVGDDKKLLIWDLRTNV-PGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVAL 292
Query: 292 WDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + + + + + F + W P ++++S D ++ ++++
Sbjct: 293 WDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDL 339
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 170 (64.9 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 49/191 (25%), Positives = 88/191 (46%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFN-SFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165
SGE NP + L H+ GL +N + + NLL S +DD IC+WD+SA +
Sbjct: 164 SGEC--NPDL-RLRGHQKEGYGLSWNPNLSGNLL-SASDDHTICLWDISAVPKEGKVVDA 219
Query: 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSV 222
+ + + VSW+ + + S + + ++WD + KP S ++ +
Sbjct: 220 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNC 278
Query: 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLT 282
L +NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 279 LSFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS 335
Query: 283 CAKDNRTICWD 293
D R WD
Sbjct: 336 SGTDRRLNVWD 346
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 67/254 (26%), Positives = 113/254 (44%)
Query: 54 DLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGN 113
DL L G E + L+W N SG+ L++ D +I +W+ ++ G+
Sbjct: 170 DLRLRGHQ--KEGYG-LSWNPNLSGN------LLSAS-DDHTICLWDISAVPKEGKVVDA 219
Query: 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA--PAEPSHFPPLRGNGSA 171
I + H V + ++ +L S ADD ++ IWD + ++PSH + A
Sbjct: 220 KTI--FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSH------SVDA 271
Query: 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231
E++ +S+N + ILA+ S + T +WDL+ K + ES K +QW+P T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 232 QLVVASDEDSSPALRLWDMRNT---MSPVKE--------FV--GHTKGVIAMSWCPNDSS 278
++ +S D L +WD+ SP F+ GHT + SW PN+
Sbjct: 332 -ILASSGTDRR--LNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 279 YLLTCAKDNRTICW 292
+ + ++DN W
Sbjct: 389 VICSVSEDNIMQVW 402
Score = 146 (56.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 55/244 (22%), Positives = 101/244 (41%)
Query: 108 GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF---- 162
G G I H+G V + P ++A+ ++ ++D + P++P
Sbjct: 109 GSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN 168
Query: 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRR 219
P LR G +G +SWN + L S S + T +WD+ K+ V+
Sbjct: 169 PDLRLRGHQKEGY--GLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 220 CSVLQWNPDVATQLVVASDEDS---SPALRLWDMR--NTMSPVKEFVGHTKGVIAMSWCP 274
+V++ DV+ L+ S S L +WD R NT P HT V +S+ P
Sbjct: 227 TAVVE---DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
Query: 275 NDSSYLLTCAKDNRTICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333
L T + D WD + ++ + + + F + W P ++++S D ++
Sbjct: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 334 IYNI 337
++++
Sbjct: 344 VWDL 347
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 170 (64.9 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 49/191 (25%), Positives = 88/191 (46%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFN-SFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165
SGE NP + L H+ GL +N + + NLL S +DD IC+WD+SA +
Sbjct: 164 SGEC--NPDL-RLRGHQKEGYGLSWNPNLSGNLL-SASDDHTICLWDISAVPKEGKVVDA 219
Query: 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSV 222
+ + + VSW+ + + S + + ++WD + KP S ++ +
Sbjct: 220 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNC 278
Query: 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLT 282
L +NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 279 LSFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS 335
Query: 283 CAKDNRTICWD 293
D R WD
Sbjct: 336 SGTDRRLNVWD 346
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 67/254 (26%), Positives = 113/254 (44%)
Query: 54 DLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGN 113
DL L G E + L+W N SG+ L++ D +I +W+ ++ G+
Sbjct: 170 DLRLRGHQ--KEGYG-LSWNPNLSGN------LLSAS-DDHTICLWDISAVPKEGKVVDA 219
Query: 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA--PAEPSHFPPLRGNGSA 171
I + H V + ++ +L S ADD ++ IWD + ++PSH + A
Sbjct: 220 KTI--FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSH------SVDA 271
Query: 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231
E++ +S+N + ILA+ S + T +WDL+ K + ES K +QW+P T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 232 QLVVASDEDSSPALRLWDMRNT---MSPVKE--------FV--GHTKGVIAMSWCPNDSS 278
++ +S D L +WD+ SP F+ GHT + SW PN+
Sbjct: 332 -ILASSGTDRR--LNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 279 YLLTCAKDNRTICW 292
+ + ++DN W
Sbjct: 389 VICSVSEDNIMQVW 402
Score = 143 (55.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 55/244 (22%), Positives = 101/244 (41%)
Query: 108 GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF---- 162
G G I H+G V + P ++A+ ++ ++D + P++P
Sbjct: 109 GSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECN 168
Query: 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRR 219
P LR G +G +SWN + L S S + T +WD+ K+ V+
Sbjct: 169 PDLRLRGHQKEGY--GLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 220 CSVLQWNPDVATQLVVASDEDS---SPALRLWDMR--NTMSPVKEFVGHTKGVIAMSWCP 274
+V++ DV+ L+ S S L +WD R NT P HT V +S+ P
Sbjct: 227 TAVVE---DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
Query: 275 NDSSYLLTCAKDNRTICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333
L T + D WD + ++ + + + F + W P ++++S D ++
Sbjct: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 334 IYNI 337
++++
Sbjct: 344 VWDL 347
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 168 (64.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +N L S +DD IC+WD+SA + +
Sbjct: 129 SGEC--NPDL-RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK 185
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + VSW+ + + S + + ++WD + KP S ++ + L
Sbjct: 186 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCL 244
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 245 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 301
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 302 GTDRRLNVWD 311
Score = 166 (63.5 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 70/269 (26%), Positives = 116/269 (43%)
Query: 54 DLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGN 113
DL L G E + L+W N SG L++ D +I +W+ ++ G+
Sbjct: 135 DLRLRGHQ--KEGYG-LSWNPNLSGH------LLSAS-DDHTICLWDISAVPKEGKVVDA 184
Query: 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA--PAEPSHFPPLRGNGSA 171
I + H V + ++ +L S ADD ++ IWD + ++PSH + A
Sbjct: 185 KTI--FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSH------SVDA 236
Query: 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231
E++ +S+N + ILA+ S + T +WDL+ K + ES K +QW+P T
Sbjct: 237 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 296
Query: 232 QLVVASDEDSSPALRLWDMRNT---MSPVKE--------FV--GHTKGVIAMSWCPNDSS 278
++ +S D L +WD+ SP F+ GHT + SW PN+
Sbjct: 297 -ILASSGTDRR--LNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 353
Query: 279 YLLTCAKDNRTICWDTVSGEIVSELPAGT 307
+ + ++DN W E P G+
Sbjct: 354 VICSVSEDNIMQVWQMAENIYNDEDPEGS 382
Score = 146 (56.5 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 55/244 (22%), Positives = 101/244 (41%)
Query: 108 GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF---- 162
G G I H+G V + P ++A+ ++ ++D + P++P
Sbjct: 74 GSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN 133
Query: 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRR 219
P LR G +G +SWN + L S S + T +WD+ K+ V+
Sbjct: 134 PDLRLRGHQKEGY--GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 191
Query: 220 CSVLQWNPDVATQLVVASDEDS---SPALRLWDMR--NTMSPVKEFVGHTKGVIAMSWCP 274
+V++ DV+ L+ S S L +WD R NT P HT V +S+ P
Sbjct: 192 TAVVE---DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 248
Query: 275 NDSSYLLTCAKDNRTICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333
L T + D WD + ++ + + + F + W P ++++S D ++
Sbjct: 249 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 308
Query: 334 IYNI 337
++++
Sbjct: 309 VWDL 312
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 147 (56.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 50/180 (27%), Positives = 81/180 (45%)
Query: 143 ADDGEICIWDLSA--PAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVV 200
ADD ++ IWD + ++PSH + A E++ +S+N + ILA+ S + T +
Sbjct: 2 ADDQKLMIWDTRSNNTSKPSH------SVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 55
Query: 201 WDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNT---MSPV 257
WDL+ K + ES K +QW+P T ++ +S D L +WD+ SP
Sbjct: 56 WDLRNLKLKLHSFESHKDEIFQVQWSPHNET-ILASSGTDRR--LNVWDLSKIGEEQSPE 112
Query: 258 KE--------FV--GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT 307
F+ GHT + SW PN+ + + ++DN W E P G+
Sbjct: 113 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGS 172
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 168 (64.2 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 43/182 (23%), Positives = 79/182 (43%)
Query: 113 NPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAA 172
NPLI L H GL +N L+ S +DD +C WD++A + +
Sbjct: 163 NPLI-RLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGH 221
Query: 173 QGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF-SESIKRRCSVLQWNPDVAT 231
+ + V+W+ + S + ++WD++ P + S + C L +NP +
Sbjct: 222 ESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNC--LAFNP--YS 277
Query: 232 QLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC 291
+ ++A+ + + LWD+RN + F H + + W P++ + L + D R
Sbjct: 278 EFILATGS-ADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHV 336
Query: 292 WD 293
WD
Sbjct: 337 WD 338
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 50/227 (22%), Positives = 98/227 (43%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDL---SAPAEPSHFPPL-RGNGSAAQGEIS 177
H+G V + N++A+ + ++ I+D SA + F PL R G +G
Sbjct: 119 HEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGY-- 176
Query: 178 FVSWNSKVQHILASTSYNGTTVVWDLKKQKPV---ISFSESIKRRCSVLQWNPDVATQLV 234
+SWN + ++ S S + T WD+ + V + + K SV++ DVA ++
Sbjct: 177 GLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVE---DVAWHVL 233
Query: 235 ---VASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC 291
V L +WD+R T +P H+ V +++ P L T + D
Sbjct: 234 HDGVFGSVGDDKKLLIWDVR-TSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVAL 292
Query: 292 WDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + + + + + F + W P ++++S D ++ ++++
Sbjct: 293 WDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDL 339
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 168 (64.2 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 43/182 (23%), Positives = 79/182 (43%)
Query: 113 NPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAA 172
NPLI L H GL +N L+ S +DD +C WD++A + +
Sbjct: 163 NPLI-RLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGH 221
Query: 173 QGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF-SESIKRRCSVLQWNPDVAT 231
+ + V+W+ + S + ++WD++ P + S + C L +NP +
Sbjct: 222 ESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNC--LAFNP--YS 277
Query: 232 QLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC 291
+ ++A+ + + LWD+RN + F H + + W P++ + L + D R
Sbjct: 278 EFILATGS-ADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHV 336
Query: 292 WD 293
WD
Sbjct: 337 WD 338
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 50/227 (22%), Positives = 98/227 (43%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDL---SAPAEPSHFPPL-RGNGSAAQGEIS 177
H+G V + N++A+ + ++ I+D SA + F PL R G +G
Sbjct: 119 HEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGY-- 176
Query: 178 FVSWNSKVQHILASTSYNGTTVVWDLKKQKPV---ISFSESIKRRCSVLQWNPDVATQLV 234
+SWN + ++ S S + T WD+ + V + + K SV++ DVA ++
Sbjct: 177 GLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVE---DVAWHVL 233
Query: 235 ---VASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC 291
V L +WD+R T +P H+ V +++ P L T + D
Sbjct: 234 HDGVFGSVGDDKKLLIWDVR-TSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVAL 292
Query: 292 WDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + + + + + F + W P ++++S D ++ ++++
Sbjct: 293 WDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDL 339
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 168 (64.2 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +N L S +DD IC+WD+SA + +
Sbjct: 164 SGEC--NPDL-RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK 220
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + VSW+ + + S + + ++WD + KP S ++ + L
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCL 279
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 280 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 337 GTDRRLNVWD 346
Score = 166 (63.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 70/269 (26%), Positives = 116/269 (43%)
Query: 54 DLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGN 113
DL L G E + L+W N SG L++ D +I +W+ ++ G+
Sbjct: 170 DLRLRGHQ--KEGYG-LSWNPNLSGH------LLSAS-DDHTICLWDISAVPKEGKVVDA 219
Query: 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA--PAEPSHFPPLRGNGSA 171
I + H V + ++ +L S ADD ++ IWD + ++PSH + A
Sbjct: 220 KTI--FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSH------SVDA 271
Query: 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231
E++ +S+N + ILA+ S + T +WDL+ K + ES K +QW+P T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 232 QLVVASDEDSSPALRLWDMRNT---MSPVKE--------FV--GHTKGVIAMSWCPNDSS 278
++ +S D L +WD+ SP F+ GHT + SW PN+
Sbjct: 332 -ILASSGTDRR--LNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 279 YLLTCAKDNRTICWDTVSGEIVSELPAGT 307
+ + ++DN W E P G+
Sbjct: 389 VICSVSEDNIMQVWQMAENIYNDEDPEGS 417
Score = 146 (56.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 55/244 (22%), Positives = 101/244 (41%)
Query: 108 GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF---- 162
G G I H+G V + P ++A+ ++ ++D + P++P
Sbjct: 109 GSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN 168
Query: 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRR 219
P LR G +G +SWN + L S S + T +WD+ K+ V+
Sbjct: 169 PDLRLRGHQKEGY--GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 220 CSVLQWNPDVATQLVVASDEDS---SPALRLWDMR--NTMSPVKEFVGHTKGVIAMSWCP 274
+V++ DV+ L+ S S L +WD R NT P HT V +S+ P
Sbjct: 227 TAVVE---DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
Query: 275 NDSSYLLTCAKDNRTICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333
L T + D WD + ++ + + + F + W P ++++S D ++
Sbjct: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 334 IYNI 337
++++
Sbjct: 344 VWDL 347
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 168 (64.2 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +N L S +DD IC+WD+SA + +
Sbjct: 164 SGEC--NPDL-RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK 220
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + VSW+ + + S + + ++WD + KP S ++ + L
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCL 279
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 280 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 337 GTDRRLNVWD 346
Score = 166 (63.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 70/269 (26%), Positives = 116/269 (43%)
Query: 54 DLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGN 113
DL L G E + L+W N SG L++ D +I +W+ ++ G+
Sbjct: 170 DLRLRGHQ--KEGYG-LSWNPNLSGH------LLSAS-DDHTICLWDISAVPKEGKVVDA 219
Query: 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA--PAEPSHFPPLRGNGSA 171
I + H V + ++ +L S ADD ++ IWD + ++PSH + A
Sbjct: 220 KTI--FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSH------SVDA 271
Query: 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231
E++ +S+N + ILA+ S + T +WDL+ K + ES K +QW+P T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 232 QLVVASDEDSSPALRLWDMRNT---MSPVKE--------FV--GHTKGVIAMSWCPNDSS 278
++ +S D L +WD+ SP F+ GHT + SW PN+
Sbjct: 332 -ILASSGTDRR--LNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 279 YLLTCAKDNRTICWDTVSGEIVSELPAGT 307
+ + ++DN W E P G+
Sbjct: 389 VICSVSEDNIMQVWQMAENIYNDEDPEGS 417
Score = 146 (56.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 55/244 (22%), Positives = 101/244 (41%)
Query: 108 GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF---- 162
G G I H+G V + P ++A+ ++ ++D + P++P
Sbjct: 109 GSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN 168
Query: 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRR 219
P LR G +G +SWN + L S S + T +WD+ K+ V+
Sbjct: 169 PDLRLRGHQKEGY--GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 220 CSVLQWNPDVATQLVVASDEDS---SPALRLWDMR--NTMSPVKEFVGHTKGVIAMSWCP 274
+V++ DV+ L+ S S L +WD R NT P HT V +S+ P
Sbjct: 227 TAVVE---DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
Query: 275 NDSSYLLTCAKDNRTICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333
L T + D WD + ++ + + + F + W P ++++S D ++
Sbjct: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 334 IYNI 337
++++
Sbjct: 344 VWDL 347
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 168 (64.2 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +N L S +DD IC+WD+SA + +
Sbjct: 164 SGEC--NPDL-RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK 220
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + VSW+ + + S + + ++WD + KP S ++ + L
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCL 279
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 280 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 337 GTDRRLNVWD 346
Score = 166 (63.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 70/269 (26%), Positives = 116/269 (43%)
Query: 54 DLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGN 113
DL L G E + L+W N SG L++ D +I +W+ ++ G+
Sbjct: 170 DLRLRGHQ--KEGYG-LSWNPNLSGH------LLSAS-DDHTICLWDISAVPKEGKVVDA 219
Query: 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA--PAEPSHFPPLRGNGSA 171
I + H V + ++ +L S ADD ++ IWD + ++PSH + A
Sbjct: 220 KTI--FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSH------SVDA 271
Query: 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231
E++ +S+N + ILA+ S + T +WDL+ K + ES K +QW+P T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 232 QLVVASDEDSSPALRLWDMRNT---MSPVKE--------FV--GHTKGVIAMSWCPNDSS 278
++ +S D L +WD+ SP F+ GHT + SW PN+
Sbjct: 332 -ILASSGTDRR--LNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 279 YLLTCAKDNRTICWDTVSGEIVSELPAGT 307
+ + ++DN W E P G+
Sbjct: 389 VICSVSEDNIMQVWQMAENIYNDEDPEGS 417
Score = 146 (56.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 55/244 (22%), Positives = 101/244 (41%)
Query: 108 GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF---- 162
G G I H+G V + P ++A+ ++ ++D + P++P
Sbjct: 109 GSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN 168
Query: 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRR 219
P LR G +G +SWN + L S S + T +WD+ K+ V+
Sbjct: 169 PDLRLRGHQKEGY--GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 220 CSVLQWNPDVATQLVVASDEDS---SPALRLWDMR--NTMSPVKEFVGHTKGVIAMSWCP 274
+V++ DV+ L+ S S L +WD R NT P HT V +S+ P
Sbjct: 227 TAVVE---DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
Query: 275 NDSSYLLTCAKDNRTICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333
L T + D WD + ++ + + + F + W P ++++S D ++
Sbjct: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 334 IYNI 337
++++
Sbjct: 344 VWDL 347
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 168 (64.2 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +N L S +DD IC+WD+SA + +
Sbjct: 164 SGEC--NPDL-RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK 220
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + VSW+ + + S + + ++WD + KP S ++ + L
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCL 279
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 280 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 337 GTDRRLNVWD 346
Score = 166 (63.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 70/269 (26%), Positives = 116/269 (43%)
Query: 54 DLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGN 113
DL L G E + L+W N SG L++ D +I +W+ ++ G+
Sbjct: 170 DLRLRGHQ--KEGYG-LSWNPNLSGH------LLSAS-DDHTICLWDISAVPKEGKVVDA 219
Query: 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA--PAEPSHFPPLRGNGSA 171
I + H V + ++ +L S ADD ++ IWD + ++PSH + A
Sbjct: 220 KTI--FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSH------SVDA 271
Query: 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231
E++ +S+N + ILA+ S + T +WDL+ K + ES K +QW+P T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 232 QLVVASDEDSSPALRLWDMRNT---MSPVKE--------FV--GHTKGVIAMSWCPNDSS 278
++ +S D L +WD+ SP F+ GHT + SW PN+
Sbjct: 332 -ILASSGTDRR--LNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 279 YLLTCAKDNRTICWDTVSGEIVSELPAGT 307
+ + ++DN W E P G+
Sbjct: 389 VICSVSEDNIMQVWQMAENIYNDEDPEGS 417
Score = 146 (56.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 55/244 (22%), Positives = 101/244 (41%)
Query: 108 GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF---- 162
G G I H+G V + P ++A+ ++ ++D + P++P
Sbjct: 109 GSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN 168
Query: 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRR 219
P LR G +G +SWN + L S S + T +WD+ K+ V+
Sbjct: 169 PDLRLRGHQKEGY--GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 220 CSVLQWNPDVATQLVVASDEDS---SPALRLWDMR--NTMSPVKEFVGHTKGVIAMSWCP 274
+V++ DV+ L+ S S L +WD R NT P HT V +S+ P
Sbjct: 227 TAVVE---DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
Query: 275 NDSSYLLTCAKDNRTICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333
L T + D WD + ++ + + + F + W P ++++S D ++
Sbjct: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 334 IYNI 337
++++
Sbjct: 344 VWDL 347
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 168 (64.2 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +N L S +DD IC+WD+SA + +
Sbjct: 164 SGEC--NPDL-RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK 220
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + VSW+ + + S + + ++WD + KP S ++ + L
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCL 279
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 280 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 337 GTDRRLNVWD 346
Score = 166 (63.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 70/269 (26%), Positives = 116/269 (43%)
Query: 54 DLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGN 113
DL L G E + L+W N SG L++ D +I +W+ ++ G+
Sbjct: 170 DLRLRGHQ--KEGYG-LSWNPNLSGH------LLSAS-DDHTICLWDISAVPKEGKVVDA 219
Query: 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA--PAEPSHFPPLRGNGSA 171
I + H V + ++ +L S ADD ++ IWD + ++PSH + A
Sbjct: 220 KTI--FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSH------SVDA 271
Query: 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231
E++ +S+N + ILA+ S + T +WDL+ K + ES K +QW+P T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 232 QLVVASDEDSSPALRLWDMRNT---MSPVKE--------FV--GHTKGVIAMSWCPNDSS 278
++ +S D L +WD+ SP F+ GHT + SW PN+
Sbjct: 332 -ILASSGTDRR--LNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 279 YLLTCAKDNRTICWDTVSGEIVSELPAGT 307
+ + ++DN W E P G+
Sbjct: 389 VICSVSEDNIMQVWQMAENIYNDEDPEGS 417
Score = 146 (56.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 55/244 (22%), Positives = 101/244 (41%)
Query: 108 GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF---- 162
G G I H+G V + P ++A+ ++ ++D + P++P
Sbjct: 109 GSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN 168
Query: 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRR 219
P LR G +G +SWN + L S S + T +WD+ K+ V+
Sbjct: 169 PDLRLRGHQKEGY--GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 220 CSVLQWNPDVATQLVVASDEDS---SPALRLWDMR--NTMSPVKEFVGHTKGVIAMSWCP 274
+V++ DV+ L+ S S L +WD R NT P HT V +S+ P
Sbjct: 227 TAVVE---DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
Query: 275 NDSSYLLTCAKDNRTICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333
L T + D WD + ++ + + + F + W P ++++S D ++
Sbjct: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 334 IYNI 337
++++
Sbjct: 344 VWDL 347
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 168 (64.2 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +N L S +DD IC+WD+SA + +
Sbjct: 164 SGEC--NPDL-RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK 220
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + VSW+ + + S + + ++WD + KP S ++ + L
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCL 279
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 280 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 337 GTDRRLNVWD 346
Score = 166 (63.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 70/269 (26%), Positives = 116/269 (43%)
Query: 54 DLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGN 113
DL L G E + L+W N SG L++ D +I +W+ ++ G+
Sbjct: 170 DLRLRGHQ--KEGYG-LSWNPNLSGH------LLSAS-DDHTICLWDISAVPKEGKVVDA 219
Query: 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA--PAEPSHFPPLRGNGSA 171
I + H V + ++ +L S ADD ++ IWD + ++PSH + A
Sbjct: 220 KTI--FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSH------SVDA 271
Query: 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231
E++ +S+N + ILA+ S + T +WDL+ K + ES K +QW+P T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 232 QLVVASDEDSSPALRLWDMRNT---MSPVKE--------FV--GHTKGVIAMSWCPNDSS 278
++ +S D L +WD+ SP F+ GHT + SW PN+
Sbjct: 332 -ILASSGTDRR--LNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 279 YLLTCAKDNRTICWDTVSGEIVSELPAGT 307
+ + ++DN W E P G+
Sbjct: 389 VICSVSEDNIMQVWQMAENIYNDEDPEGS 417
Score = 146 (56.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 55/244 (22%), Positives = 101/244 (41%)
Query: 108 GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF---- 162
G G I H+G V + P ++A+ ++ ++D + P++P
Sbjct: 109 GSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN 168
Query: 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRR 219
P LR G +G +SWN + L S S + T +WD+ K+ V+
Sbjct: 169 PDLRLRGHQKEGY--GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 220 CSVLQWNPDVATQLVVASDEDS---SPALRLWDMR--NTMSPVKEFVGHTKGVIAMSWCP 274
+V++ DV+ L+ S S L +WD R NT P HT V +S+ P
Sbjct: 227 TAVVE---DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
Query: 275 NDSSYLLTCAKDNRTICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333
L T + D WD + ++ + + + F + W P ++++S D ++
Sbjct: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 334 IYNI 337
++++
Sbjct: 344 VWDL 347
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 168 (64.2 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +N L S +DD IC+WD+SA + +
Sbjct: 164 SGEC--NPDL-RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK 220
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + VSW+ + + S + + ++WD + KP S ++ + L
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCL 279
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 280 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 337 GTDRRLNVWD 346
Score = 166 (63.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 70/269 (26%), Positives = 116/269 (43%)
Query: 54 DLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGN 113
DL L G E + L+W N SG L++ D +I +W+ ++ G+
Sbjct: 170 DLRLRGHQ--KEGYG-LSWNPNLSGH------LLSAS-DDHTICLWDISAVPKEGKVVDA 219
Query: 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA--PAEPSHFPPLRGNGSA 171
I + H V + ++ +L S ADD ++ IWD + ++PSH + A
Sbjct: 220 KTI--FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSH------SVDA 271
Query: 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231
E++ +S+N + ILA+ S + T +WDL+ K + ES K +QW+P T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 232 QLVVASDEDSSPALRLWDMRNT---MSPVKE--------FV--GHTKGVIAMSWCPNDSS 278
++ +S D L +WD+ SP F+ GHT + SW PN+
Sbjct: 332 -ILASSGTDRR--LNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 279 YLLTCAKDNRTICWDTVSGEIVSELPAGT 307
+ + ++DN W E P G+
Sbjct: 389 VICSVSEDNIMQVWQMAENIYNDEDPEGS 417
Score = 146 (56.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 55/244 (22%), Positives = 101/244 (41%)
Query: 108 GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF---- 162
G G I H+G V + P ++A+ ++ ++D + P++P
Sbjct: 109 GSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN 168
Query: 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRR 219
P LR G +G +SWN + L S S + T +WD+ K+ V+
Sbjct: 169 PDLRLRGHQKEGY--GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 220 CSVLQWNPDVATQLVVASDEDS---SPALRLWDMR--NTMSPVKEFVGHTKGVIAMSWCP 274
+V++ DV+ L+ S S L +WD R NT P HT V +S+ P
Sbjct: 227 TAVVE---DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
Query: 275 NDSSYLLTCAKDNRTICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333
L T + D WD + ++ + + + F + W P ++++S D ++
Sbjct: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 334 IYNI 337
++++
Sbjct: 344 VWDL 347
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 168 (64.2 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +N L S +DD IC+WD+SA + +
Sbjct: 164 SGEC--NPDL-RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK 220
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + VSW+ + + S + + ++WD + KP S ++ + L
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCL 279
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 280 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 337 GTDRRLNVWD 346
Score = 164 (62.8 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 70/269 (26%), Positives = 116/269 (43%)
Query: 54 DLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGN 113
DL L G E + L+W N SG L++ D +I +W+ ++ G+
Sbjct: 170 DLRLRGHQ--KEGYG-LSWNPNLSGH------LLSAS-DDHTICLWDISAVPKEGKVVDA 219
Query: 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA--PAEPSHFPPLRGNGSA 171
I + H V + ++ +L S ADD ++ IWD + ++PSH + A
Sbjct: 220 KTI--FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSH------SVDA 271
Query: 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231
E++ +S+N + ILA+ S + T +WDL+ K + ES K +QW+P T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 232 QLVVASDEDSSPALRLWDMRNT---MSPVKE--------FV--GHTKGVIAMSWCPNDSS 278
++ +S D L +WD+ SP F+ GHT + SW PN+
Sbjct: 332 -ILASSGTDRR--LNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 279 YLLTCAKDNRTICWDTVSGEIVSELPAGT 307
+ + ++DN W E P G+
Sbjct: 389 VICSVSEDNIMQVWQMAENINNDEDPEGS 417
Score = 146 (56.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 55/244 (22%), Positives = 101/244 (41%)
Query: 108 GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF---- 162
G G I H+G V + P ++A+ ++ ++D + P++P
Sbjct: 109 GSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN 168
Query: 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRR 219
P LR G +G +SWN + L S S + T +WD+ K+ V+
Sbjct: 169 PDLRLRGHQKEGY--GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 220 CSVLQWNPDVATQLVVASDEDS---SPALRLWDMR--NTMSPVKEFVGHTKGVIAMSWCP 274
+V++ DV+ L+ S S L +WD R NT P HT V +S+ P
Sbjct: 227 TAVVE---DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
Query: 275 NDSSYLLTCAKDNRTICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333
L T + D WD + ++ + + + F + W P ++++S D ++
Sbjct: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 334 IYNI 337
++++
Sbjct: 344 VWDL 347
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 178 (67.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 56/217 (25%), Positives = 106/217 (48%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H V L + LLA+G DD + +W ++ +P+ L G+ S + V
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSIN---KPNCIMSLTGHTSPVES----VRL 71
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N+ + I+A S +G+ VWDL+ K + + CS L ++P + V + +D+
Sbjct: 72 NTPEELIVAG-SQSGSIRVWDLEAAKILRTLMGHKANICS-LDFHP--YGEFVASGSQDT 127
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301
+ ++LWD+R V + GH++ V + + P D +L + A D+ WD +G+++S
Sbjct: 128 N--IKLWDIRRK-GCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
E P T + ++P ++++ S D I +++E
Sbjct: 184 EFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLE 219
Score = 40 (19.1 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 18/70 (25%), Positives = 26/70 (37%)
Query: 491 IPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDARGSLPS----QIGAVPGPKM 546
I TPP R +E + P + P +DA+ +P+ G +
Sbjct: 392 ISRTPP--RRSEPFPAPPEDDM---ATAKEAAKPSPATDAQFPVPNICPGGAGTLEVLSR 446
Query: 547 PNVVAPTPTP 556
P VV TP P
Sbjct: 447 PPVVTSTPAP 456
Score = 38 (18.4 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 465 PPQATQPNFTAPAPAPV-TSQPAMRPFIPST 494
PP+ ++P F AP + T++ A +P P+T
Sbjct: 396 PPRRSEP-FPAPPEDDMATAKEAAKPS-PAT 424
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 167 (63.8 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 61/266 (22%), Positives = 111/266 (41%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +NS L S +DD +C+WD++A + +
Sbjct: 163 SGEC--NPDL-RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAK 219
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + V+W+ + + S + + ++WD + KP ++ + L
Sbjct: 220 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCL 278
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 279 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 335
Query: 284 AKDNRTICWDTV------SGEIVSELP-------AGTNWNF-DIHWYPKIPGVISASSFD 329
D R WD S E + P G D W P P VI + S D
Sbjct: 336 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
Query: 330 GKIGIYNIEGCSRYGVGDSNFSAAPL 355
+ I+ + + Y +S+ +A+ L
Sbjct: 396 NIMQIWQMAE-NIYNDEESDVTASEL 420
Score = 164 (62.8 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 56/230 (24%), Positives = 102/230 (44%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF----PPLRGNGSAAQGEI 176
H+G V + P+++A+ ++ ++D + PA+P P LR G +G
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY- 180
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVATQL 233
+SWNS + L S S + T +WD+ K+ ++ +V++ DVA L
Sbjct: 181 -GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE---DVAWHL 236
Query: 234 VVASDEDS---SPALRLWDMR-NTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ S S L +WD R NT S V HT V +S+ P L T + D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 289 TICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + ++ + + + F +HW P ++++S D ++ ++++
Sbjct: 297 VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
>TAIR|locus:2050388 [details] [associations]
symbol:AT2G19540 "AT2G19540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC005917
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000036730
KO:K14848 OMA:NRLMMLR UniGene:At.24966 EMBL:AF370506 EMBL:AY128814
IPI:IPI00526267 PIR:A84578 RefSeq:NP_179544.1
ProteinModelPortal:Q9ZUN8 SMR:Q9ZUN8 STRING:Q9ZUN8 PaxDb:Q9ZUN8
PRIDE:Q9ZUN8 EnsemblPlants:AT2G19540.1 GeneID:816473
KEGG:ath:AT2G19540 TAIR:At2g19540 InParanoid:Q9ZUN8
PhylomeDB:Q9ZUN8 ProtClustDB:CLSN2683177 ArrayExpress:Q9ZUN8
Genevestigator:Q9ZUN8 Uniprot:Q9ZUN8
Length = 469
Score = 158 (60.7 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 51/214 (23%), Positives = 97/214 (45%)
Query: 94 GSIDIWNP---LSLISSGETGG----NPLI-----AHLSRHKGPVRGLEFNSFTPNLLAS 141
G + +W+ L+ ++ ET G +P++ + S HK ++++ T L S
Sbjct: 182 GHVQVWDMSSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLS 241
Query: 142 GADDGEICIWDLSAPAEPSH-FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVV 200
G I +W+ PA S P+ G A + + W+ +++ AS S +G+ V
Sbjct: 242 GDCKSMIHLWE---PASGSWAVDPIPFAGHTAS--VEDLQWSPAEENVFASCSVDGSVAV 296
Query: 201 WDLKKQK-PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE 259
WD++ K P +SF ++ +V+ WN + L SD+ + L ++ + V
Sbjct: 297 WDIRLGKSPALSF-KAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAH 355
Query: 260 FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
F H + ++ W +++S L + DN+ WD
Sbjct: 356 FEYHKHPITSIEWSAHEASTLAVTSGDNQLTIWD 389
Score = 115 (45.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 45/147 (30%), Positives = 69/147 (46%)
Query: 11 ASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIF---KLDFQSEDRDLLLVGESPSSERF 67
AS ++A D P AG A DL +S A +F +D D+ L G+SP+ F
Sbjct: 254 ASGSWAVD-PIPFAGHTASVEDLQWSP-AEENVFASCSVDGSVAVWDIRL-GKSPALS-F 309
Query: 68 NRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVR 127
N + ++A G DG+ I L LI GG+ ++AH HK P+
Sbjct: 310 KAHNADVNVISWNRLASCMLASGSDDGTFSI-RDLRLIK----GGDAVVAHFEYHKHPIT 364
Query: 128 GLEFNSFTPNLLASGADDGEICIWDLS 154
+E+++ + LA + D ++ IWDLS
Sbjct: 365 SIEWSAHEASTLAVTSGDNQLTIWDLS 391
Score = 58 (25.5 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 312 DIHWYPKIPGVISASSFDG-KIGI-YNIE 338
++HW+ +IPG+I +++ DG I + YNI+
Sbjct: 432 ELHWHNQIPGMIISTAGDGFNILMPYNIQ 460
Score = 37 (18.1 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 6 GINRSASVAFAPDAPYMAAGTMA 28
G+NR+ F P YM AGT A
Sbjct: 75 GLNRTE---F-PHTLYMVAGTQA 93
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 166 (63.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 41/178 (23%), Positives = 79/178 (44%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H+ GL +NS L S +DD +C+WD+SA + + + +
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVED 231
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVLQWNPDVATQLVV 235
V+W+ + + S + + ++WD + KP S ++ + L +NP ++ ++
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSV-DAHTAEVNCLSFNP--YSEFIL 288
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
A+ + + LWD+RN + F H + + W P++ + L + D R WD
Sbjct: 289 ATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Score = 158 (60.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 56/230 (24%), Positives = 101/230 (43%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF----PPLRGNGSAAQGEI 176
H+G V + P ++A+ ++ ++D + P++P P LR G +G
Sbjct: 122 HEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGY- 180
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVATQL 233
+SWNS + L S S + T +WD+ K+ V+ +V++ DVA L
Sbjct: 181 -GLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVE---DVAWHL 236
Query: 234 VVASDEDS---SPALRLWDMR-NTMS-PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ S S L +WD R NT S P HT V +S+ P L T + D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 289 TICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + ++ + + + F +HW P ++++S D ++ ++++
Sbjct: 297 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 166 (63.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 41/178 (23%), Positives = 79/178 (44%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H+ GL +NS L S +DD +C+WD+SA + + + +
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVED 231
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVLQWNPDVATQLVV 235
V+W+ + + S + + ++WD + KP S ++ + L +NP ++ ++
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSV-DAHTAEVNCLSFNP--YSEFIL 288
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
A+ + + LWD+RN + F H + + W P++ + L + D R WD
Sbjct: 289 ATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Score = 158 (60.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 56/230 (24%), Positives = 101/230 (43%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF----PPLRGNGSAAQGEI 176
H+G V + P ++A+ ++ ++D + P++P P LR G +G
Sbjct: 122 HEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGY- 180
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVATQL 233
+SWNS + L S S + T +WD+ K+ V+ +V++ DVA L
Sbjct: 181 -GLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVE---DVAWHL 236
Query: 234 VVASDEDS---SPALRLWDMR-NTMS-PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ S S L +WD R NT S P HT V +S+ P L T + D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 289 TICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + ++ + + + F +HW P ++++S D ++ ++++
Sbjct: 297 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 154 (59.3 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 52/217 (23%), Positives = 101/217 (46%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H V L T LLA+G DD + +W ++ +P+ L G+ + I +
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVN---KPNCVMSLTGHTTP----IESLQI 71
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
++K + I+A S +G+ VWDL+ K + + CS L ++P V + D+
Sbjct: 72 SAKEELIVAG-SQSGSIRVWDLEAAKILRTLLGHKANICS-LDFHP--YGSFVASGSLDT 127
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301
++LWD+R + ++ HT+ V + + P D +L + A D+ WD +G+++
Sbjct: 128 D--IKLWDVRRK-GCIFKYKSHTQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKVMF 183
Query: 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
E + ++P I ++++ S I +++E
Sbjct: 184 EFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLE 220
Score = 130 (50.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 51/189 (26%), Positives = 87/189 (46%)
Query: 116 IAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGE 175
+ L+ H P+ L+ ++ L+ +G+ G I +WDL A L G+ A
Sbjct: 56 VMSLTGHTTPIESLQISA-KEELIVAGSQSGSIRVWDLEAA---KILRTLLGH-KANICS 110
Query: 176 ISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLV 234
+ F + S V AS S + +WD++++ + + + RC L+++PD L
Sbjct: 111 LDFHPYGSFV----ASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRC--LRFSPD-GKWLA 163
Query: 235 VASDEDSSPALRLWDMRNTMSPVK-EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CW 292
A+D+ + ++LWD+ T V EF GH V + + P+ YLL + TI W
Sbjct: 164 SAADDHT---VKLWDL--TAGKVMFEFTGHYGPVNVVEFHPS-IEYLLASGSSSMTIRFW 217
Query: 293 DTVSGEIVS 301
D +VS
Sbjct: 218 DLEKFHVVS 226
Score = 63 (27.2 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 465 PPQATQPNFTAPAPAPVTSQPAMRPFIP---STP-PVLRNAEQYQQPTLGS 511
PP +P P P+T++ A++P P TP P E +Q+P + S
Sbjct: 396 PPHINEPFPAPPEDEPITAKEAVKPNQPVEVQTPLPKQELPETFQRPPIAS 446
Score = 40 (19.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 464 IPPQATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRN 500
+P Q F P P+ S M PS P RN
Sbjct: 430 LPKQELPETFQRP---PIASSTPMPRAEPSVIPAARN 463
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 165 (63.1 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 44/190 (23%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +NS L S +DD +C+WD++A + +
Sbjct: 154 SGEC--NPDL-RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAK 210
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + V+W+ + + S + + ++WD + KP ++ + L
Sbjct: 211 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCL 269
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 270 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 326
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 327 GTDRRLNVWD 336
Score = 165 (63.1 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 59/243 (24%), Positives = 105/243 (43%)
Query: 109 ETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF----P 163
E GG H+G V + P+++A+ ++ ++D + PA+P P
Sbjct: 100 EKGGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNP 159
Query: 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRC 220
LR G +G +SWNS + L S S + T +WD+ K+ ++
Sbjct: 160 DLRLRGHQKEGY--GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 217
Query: 221 SVLQWNPDVATQLVVASDEDS---SPALRLWDMR-NTMSPVKEFV-GHTKGVIAMSWCPN 275
+V++ DVA L+ S S L +WD R NT S V HT V +S+ P
Sbjct: 218 AVVE---DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPY 274
Query: 276 DSSYLLTCAKDNRTICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGI 334
L T + D WD + ++ + + + F +HW P ++++S D ++ +
Sbjct: 275 SEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 334
Query: 335 YNI 337
+++
Sbjct: 335 WDL 337
Score = 155 (59.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 76/304 (25%), Positives = 130/304 (42%)
Query: 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSE-DRDLLLVGESPSSE 65
+NR+ + P P++ A + L F + + K D E + DL L G E
Sbjct: 117 VNRAR---YMPQNPHIIATKTPSSDVLVFDYTKHPA--KPDPSGECNPDLRLRGHQ--KE 169
Query: 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH--LSRHK 123
+ L+W N SG L++ D ++ +W+ I++G G + A + H
Sbjct: 170 GYG-LSWNSNLSGH------LLSAS-DDHTVCLWD----INAGPKEGKIVDAKAIFTGHS 217
Query: 124 GPVRGLEFNSFTPNLLASGADDGEICIWDL--SAPAEPSHFPPLRGNGSAAQGEISFVSW 181
V + ++ +L S ADD ++ IWD + ++PSH A E++ +S+
Sbjct: 218 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLV------DAHTAEVNCLSF 271
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N + ILA+ S + T +WDL+ K + ES K + W+P T ++ +S D
Sbjct: 272 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET-ILASSGTDR 330
Query: 242 SPALRLWDMRNTMS-----------PVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
L +WD+ P F+ GHT + SW PN+ + + ++DN
Sbjct: 331 R--LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 388
Query: 289 TICW 292
W
Sbjct: 389 MQIW 392
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 165 (63.1 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 44/190 (23%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +NS L S +DD +C+WD++A + +
Sbjct: 154 SGEC--NPDL-RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAK 210
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + V+W+ + + S + + ++WD + KP ++ + L
Sbjct: 211 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCL 269
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 270 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 326
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 327 GTDRRLNVWD 336
Score = 164 (62.8 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 56/230 (24%), Positives = 102/230 (44%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF----PPLRGNGSAAQGEI 176
H+G V + P+++A+ ++ ++D + PA+P P LR G +G
Sbjct: 113 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY- 171
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVATQL 233
+SWNS + L S S + T +WD+ K+ ++ +V++ DVA L
Sbjct: 172 -GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE---DVAWHL 227
Query: 234 VVASDEDS---SPALRLWDMR-NTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ S S L +WD R NT S V HT V +S+ P L T + D
Sbjct: 228 LHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 287
Query: 289 TICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + ++ + + + F +HW P ++++S D ++ ++++
Sbjct: 288 VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 337
Score = 155 (59.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 76/304 (25%), Positives = 130/304 (42%)
Query: 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSE-DRDLLLVGESPSSE 65
+NR+ + P P++ A + L F + + K D E + DL L G E
Sbjct: 117 VNRAR---YMPQNPHIIATKTPSSDVLVFDYTKHPA--KPDPSGECNPDLRLRGHQ--KE 169
Query: 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH--LSRHK 123
+ L+W N SG L++ D ++ +W+ I++G G + A + H
Sbjct: 170 GYG-LSWNSNLSGH------LLSAS-DDHTVCLWD----INAGPKEGKIVDAKAIFTGHS 217
Query: 124 GPVRGLEFNSFTPNLLASGADDGEICIWDL--SAPAEPSHFPPLRGNGSAAQGEISFVSW 181
V + ++ +L S ADD ++ IWD + ++PSH A E++ +S+
Sbjct: 218 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLV------DAHTAEVNCLSF 271
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N + ILA+ S + T +WDL+ K + ES K + W+P T ++ +S D
Sbjct: 272 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET-ILASSGTDR 330
Query: 242 SPALRLWDMRNTMS-----------PVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
L +WD+ P F+ GHT + SW PN+ + + ++DN
Sbjct: 331 R--LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 388
Query: 289 TICW 292
W
Sbjct: 389 MQIW 392
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 165 (63.1 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 44/190 (23%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +NS L S +DD +C+WD++A + +
Sbjct: 163 SGEC--NPDL-RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAK 219
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + V+W+ + + S + + ++WD + KP ++ + L
Sbjct: 220 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCL 278
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 279 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 335
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 336 GTDRRLNVWD 345
Score = 164 (62.8 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 56/230 (24%), Positives = 102/230 (44%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF----PPLRGNGSAAQGEI 176
H+G V + P+++A+ ++ ++D + PA+P P LR G +G
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY- 180
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVATQL 233
+SWNS + L S S + T +WD+ K+ ++ +V++ DVA L
Sbjct: 181 -GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE---DVAWHL 236
Query: 234 VVASDEDS---SPALRLWDMR-NTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ S S L +WD R NT S V HT V +S+ P L T + D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 289 TICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + ++ + + + F +HW P ++++S D ++ ++++
Sbjct: 297 VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Score = 155 (59.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 76/304 (25%), Positives = 130/304 (42%)
Query: 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSE-DRDLLLVGESPSSE 65
+NR+ + P P++ A + L F + + K D E + DL L G E
Sbjct: 126 VNRAR---YMPQNPHIIATKTPSSDVLVFDYTKHPA--KPDPSGECNPDLRLRGHQ--KE 178
Query: 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH--LSRHK 123
+ L+W N SG L++ D ++ +W+ I++G G + A + H
Sbjct: 179 GYG-LSWNSNLSGH------LLSAS-DDHTVCLWD----INAGPKEGKIVDAKAIFTGHS 226
Query: 124 GPVRGLEFNSFTPNLLASGADDGEICIWDL--SAPAEPSHFPPLRGNGSAAQGEISFVSW 181
V + ++ +L S ADD ++ IWD + ++PSH A E++ +S+
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLV------DAHTAEVNCLSF 280
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N + ILA+ S + T +WDL+ K + ES K + W+P T ++ +S D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET-ILASSGTDR 339
Query: 242 SPALRLWDMRNTMS-----------PVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
L +WD+ P F+ GHT + SW PN+ + + ++DN
Sbjct: 340 R--LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
Query: 289 TICW 292
W
Sbjct: 398 MQIW 401
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 165 (63.1 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 44/190 (23%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +NS L S +DD +C+WD++A + +
Sbjct: 163 SGEC--NPDL-RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAK 219
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + V+W+ + + S + + ++WD + KP ++ + L
Sbjct: 220 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCL 278
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 279 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 335
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 336 GTDRRLNVWD 345
Score = 164 (62.8 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 56/230 (24%), Positives = 102/230 (44%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF----PPLRGNGSAAQGEI 176
H+G V + P+++A+ ++ ++D + PA+P P LR G +G
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY- 180
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVATQL 233
+SWNS + L S S + T +WD+ K+ ++ +V++ DVA L
Sbjct: 181 -GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE---DVAWHL 236
Query: 234 VVASDEDS---SPALRLWDMR-NTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ S S L +WD R NT S V HT V +S+ P L T + D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 289 TICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + ++ + + + F +HW P ++++S D ++ ++++
Sbjct: 297 VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Score = 155 (59.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 76/304 (25%), Positives = 130/304 (42%)
Query: 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSE-DRDLLLVGESPSSE 65
+NR+ + P P++ A + L F + + K D E + DL L G E
Sbjct: 126 VNRAR---YMPQNPHIIATKTPSSDVLVFDYTKHPA--KPDPSGECNPDLRLRGHQ--KE 178
Query: 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH--LSRHK 123
+ L+W N SG L++ D ++ +W+ I++G G + A + H
Sbjct: 179 GYG-LSWNSNLSGH------LLSAS-DDHTVCLWD----INAGPKEGKIVDAKAIFTGHS 226
Query: 124 GPVRGLEFNSFTPNLLASGADDGEICIWDL--SAPAEPSHFPPLRGNGSAAQGEISFVSW 181
V + ++ +L S ADD ++ IWD + ++PSH A E++ +S+
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLV------DAHTAEVNCLSF 280
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N + ILA+ S + T +WDL+ K + ES K + W+P T ++ +S D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET-ILASSGTDR 339
Query: 242 SPALRLWDMRNTMS-----------PVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
L +WD+ P F+ GHT + SW PN+ + + ++DN
Sbjct: 340 R--LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
Query: 289 TICW 292
W
Sbjct: 398 MQIW 401
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 165 (63.1 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 44/190 (23%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +NS L S +DD +C+WD++A + +
Sbjct: 163 SGEC--NPDL-RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAK 219
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + V+W+ + + S + + ++WD + KP ++ + L
Sbjct: 220 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCL 278
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 279 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 335
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 336 GTDRRLNVWD 345
Score = 164 (62.8 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 56/230 (24%), Positives = 102/230 (44%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF----PPLRGNGSAAQGEI 176
H+G V + P+++A+ ++ ++D + PA+P P LR G +G
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY- 180
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVATQL 233
+SWNS + L S S + T +WD+ K+ ++ +V++ DVA L
Sbjct: 181 -GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE---DVAWHL 236
Query: 234 VVASDEDS---SPALRLWDMR-NTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ S S L +WD R NT S V HT V +S+ P L T + D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 289 TICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + ++ + + + F +HW P ++++S D ++ ++++
Sbjct: 297 VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Score = 155 (59.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 76/304 (25%), Positives = 130/304 (42%)
Query: 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSE-DRDLLLVGESPSSE 65
+NR+ + P P++ A + L F + + K D E + DL L G E
Sbjct: 126 VNRAR---YMPQNPHIIATKTPSSDVLVFDYTKHPA--KPDPSGECNPDLRLRGHQ--KE 178
Query: 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH--LSRHK 123
+ L+W N SG L++ D ++ +W+ I++G G + A + H
Sbjct: 179 GYG-LSWNSNLSGH------LLSAS-DDHTVCLWD----INAGPKEGKIVDAKAIFTGHS 226
Query: 124 GPVRGLEFNSFTPNLLASGADDGEICIWDL--SAPAEPSHFPPLRGNGSAAQGEISFVSW 181
V + ++ +L S ADD ++ IWD + ++PSH A E++ +S+
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLV------DAHTAEVNCLSF 280
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N + ILA+ S + T +WDL+ K + ES K + W+P T ++ +S D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET-ILASSGTDR 339
Query: 242 SPALRLWDMRNTMS-----------PVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
L +WD+ P F+ GHT + SW PN+ + + ++DN
Sbjct: 340 R--LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
Query: 289 TICW 292
W
Sbjct: 398 MQIW 401
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 165 (63.1 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 44/190 (23%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +NS L S +DD +C+WD++A + +
Sbjct: 163 SGEC--NPDL-RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAK 219
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + V+W+ + + S + + ++WD + KP ++ + L
Sbjct: 220 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCL 278
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 279 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 335
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 336 GTDRRLNVWD 345
Score = 164 (62.8 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 56/230 (24%), Positives = 102/230 (44%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF----PPLRGNGSAAQGEI 176
H+G V + P+++A+ ++ ++D + PA+P P LR G +G
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY- 180
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVATQL 233
+SWNS + L S S + T +WD+ K+ ++ +V++ DVA L
Sbjct: 181 -GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE---DVAWHL 236
Query: 234 VVASDEDS---SPALRLWDMR-NTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ S S L +WD R NT S V HT V +S+ P L T + D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 289 TICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + ++ + + + F +HW P ++++S D ++ ++++
Sbjct: 297 VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Score = 155 (59.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 76/304 (25%), Positives = 130/304 (42%)
Query: 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSE-DRDLLLVGESPSSE 65
+NR+ + P P++ A + L F + + K D E + DL L G E
Sbjct: 126 VNRAR---YMPQNPHIIATKTPSSDVLVFDYTKHPA--KPDPSGECNPDLRLRGHQ--KE 178
Query: 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH--LSRHK 123
+ L+W N SG L++ D ++ +W+ I++G G + A + H
Sbjct: 179 GYG-LSWNSNLSGH------LLSAS-DDHTVCLWD----INAGPKEGKIVDAKAIFTGHS 226
Query: 124 GPVRGLEFNSFTPNLLASGADDGEICIWDL--SAPAEPSHFPPLRGNGSAAQGEISFVSW 181
V + ++ +L S ADD ++ IWD + ++PSH A E++ +S+
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLV------DAHTAEVNCLSF 280
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N + ILA+ S + T +WDL+ K + ES K + W+P T ++ +S D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET-ILASSGTDR 339
Query: 242 SPALRLWDMRNTMS-----------PVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
L +WD+ P F+ GHT + SW PN+ + + ++DN
Sbjct: 340 R--LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
Query: 289 TICW 292
W
Sbjct: 398 MQIW 401
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 165 (63.1 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 44/190 (23%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +NS L S +DD +C+WD++A + +
Sbjct: 163 SGEC--NPDL-RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAK 219
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + V+W+ + + S + + ++WD + KP ++ + L
Sbjct: 220 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCL 278
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 279 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 335
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 336 GTDRRLNVWD 345
Score = 164 (62.8 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 56/230 (24%), Positives = 102/230 (44%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF----PPLRGNGSAAQGEI 176
H+G V + P+++A+ ++ ++D + PA+P P LR G +G
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY- 180
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVATQL 233
+SWNS + L S S + T +WD+ K+ ++ +V++ DVA L
Sbjct: 181 -GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE---DVAWHL 236
Query: 234 VVASDEDS---SPALRLWDMR-NTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ S S L +WD R NT S V HT V +S+ P L T + D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 289 TICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + ++ + + + F +HW P ++++S D ++ ++++
Sbjct: 297 VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Score = 155 (59.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 76/304 (25%), Positives = 130/304 (42%)
Query: 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSE-DRDLLLVGESPSSE 65
+NR+ + P P++ A + L F + + K D E + DL L G E
Sbjct: 126 VNRAR---YMPQNPHIIATKTPSSDVLVFDYTKHPA--KPDPSGECNPDLRLRGHQ--KE 178
Query: 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH--LSRHK 123
+ L+W N SG L++ D ++ +W+ I++G G + A + H
Sbjct: 179 GYG-LSWNSNLSGH------LLSAS-DDHTVCLWD----INAGPKEGKIVDAKAIFTGHS 226
Query: 124 GPVRGLEFNSFTPNLLASGADDGEICIWDL--SAPAEPSHFPPLRGNGSAAQGEISFVSW 181
V + ++ +L S ADD ++ IWD + ++PSH A E++ +S+
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLV------DAHTAEVNCLSF 280
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N + ILA+ S + T +WDL+ K + ES K + W+P T ++ +S D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET-ILASSGTDR 339
Query: 242 SPALRLWDMRNTMS-----------PVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
L +WD+ P F+ GHT + SW PN+ + + ++DN
Sbjct: 340 R--LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
Query: 289 TICW 292
W
Sbjct: 398 MQIW 401
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 165 (63.1 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 44/190 (23%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +NS L S +DD +C+WD++A + +
Sbjct: 163 SGEC--NPDL-RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAK 219
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + V+W+ + + S + + ++WD + KP ++ + L
Sbjct: 220 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCL 278
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 279 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 335
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 336 GTDRRLNVWD 345
Score = 164 (62.8 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 56/230 (24%), Positives = 102/230 (44%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF----PPLRGNGSAAQGEI 176
H+G V + P+++A+ ++ ++D + PA+P P LR G +G
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY- 180
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVATQL 233
+SWNS + L S S + T +WD+ K+ ++ +V++ DVA L
Sbjct: 181 -GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE---DVAWHL 236
Query: 234 VVASDEDS---SPALRLWDMR-NTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ S S L +WD R NT S V HT V +S+ P L T + D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 289 TICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + ++ + + + F +HW P ++++S D ++ ++++
Sbjct: 297 VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Score = 155 (59.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 76/304 (25%), Positives = 130/304 (42%)
Query: 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSE-DRDLLLVGESPSSE 65
+NR+ + P P++ A + L F + + K D E + DL L G E
Sbjct: 126 VNRAR---YMPQNPHIIATKTPSSDVLVFDYTKHPA--KPDPSGECNPDLRLRGHQ--KE 178
Query: 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH--LSRHK 123
+ L+W N SG L++ D ++ +W+ I++G G + A + H
Sbjct: 179 GYG-LSWNSNLSGH------LLSAS-DDHTVCLWD----INAGPKEGKIVDAKAIFTGHS 226
Query: 124 GPVRGLEFNSFTPNLLASGADDGEICIWDL--SAPAEPSHFPPLRGNGSAAQGEISFVSW 181
V + ++ +L S ADD ++ IWD + ++PSH A E++ +S+
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLV------DAHTAEVNCLSF 280
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N + ILA+ S + T +WDL+ K + ES K + W+P T ++ +S D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET-ILASSGTDR 339
Query: 242 SPALRLWDMRNTMS-----------PVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
L +WD+ P F+ GHT + SW PN+ + + ++DN
Sbjct: 340 R--LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
Query: 289 TICW 292
W
Sbjct: 398 MQIW 401
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 165 (63.1 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 44/190 (23%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +NS L S +DD +C+WD++A + +
Sbjct: 207 SGEC--NPDL-RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAK 263
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + V+W+ + + S + + ++WD + KP ++ + L
Sbjct: 264 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCL 322
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 323 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 379
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 380 GTDRRLNVWD 389
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 56/230 (24%), Positives = 102/230 (44%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF----PPLRGNGSAAQGEI 176
H+G V + P+++A+ ++ ++D + PA+P P LR G +G
Sbjct: 166 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY- 224
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVATQL 233
+SWNS + L S S + T +WD+ K+ ++ +V++ DVA L
Sbjct: 225 -GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE---DVAWHL 280
Query: 234 VVASDEDS---SPALRLWDMR-NTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ S S L +WD R NT S V HT V +S+ P L T + D
Sbjct: 281 LHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 340
Query: 289 TICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + ++ + + + F +HW P ++++S D ++ ++++
Sbjct: 341 VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 390
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 76/304 (25%), Positives = 130/304 (42%)
Query: 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSE-DRDLLLVGESPSSE 65
+NR+ + P P++ A + L F + + K D E + DL L G E
Sbjct: 170 VNRAR---YMPQNPHIIATKTPSSDVLVFDYTKHPA--KPDPSGECNPDLRLRGHQ--KE 222
Query: 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH--LSRHK 123
+ L+W N SG L++ D ++ +W+ I++G G + A + H
Sbjct: 223 GYG-LSWNSNLSGH------LLSAS-DDHTVCLWD----INAGPKEGKIVDAKAIFTGHS 270
Query: 124 GPVRGLEFNSFTPNLLASGADDGEICIWDL--SAPAEPSHFPPLRGNGSAAQGEISFVSW 181
V + ++ +L S ADD ++ IWD + ++PSH A E++ +S+
Sbjct: 271 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLV------DAHTAEVNCLSF 324
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N + ILA+ S + T +WDL+ K + ES K + W+P T ++ +S D
Sbjct: 325 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET-ILASSGTDR 383
Query: 242 SPALRLWDMRNTMS-----------PVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
L +WD+ P F+ GHT + SW PN+ + + ++DN
Sbjct: 384 R--LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 441
Query: 289 TICW 292
W
Sbjct: 442 MQIW 445
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 165 (63.1 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 44/190 (23%), Positives = 84/190 (44%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +NS L S +DD +C+WD++A + +
Sbjct: 207 SGEC--NPDL-RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAK 263
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + V+W+ + + S + + ++WD + KP ++ + L
Sbjct: 264 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCL 322
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 323 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 379
Query: 284 AKDNRTICWD 293
D R WD
Sbjct: 380 GTDRRLNVWD 389
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 56/230 (24%), Positives = 102/230 (44%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF----PPLRGNGSAAQGEI 176
H+G V + P+++A+ ++ ++D + PA+P P LR G +G
Sbjct: 166 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY- 224
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVATQL 233
+SWNS + L S S + T +WD+ K+ ++ +V++ DVA L
Sbjct: 225 -GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE---DVAWHL 280
Query: 234 VVASDEDS---SPALRLWDMR-NTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ S S L +WD R NT S V HT V +S+ P L T + D
Sbjct: 281 LHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 340
Query: 289 TICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + ++ + + + F +HW P ++++S D ++ ++++
Sbjct: 341 VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 390
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 76/304 (25%), Positives = 130/304 (42%)
Query: 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSE-DRDLLLVGESPSSE 65
+NR+ + P P++ A + L F + + K D E + DL L G E
Sbjct: 170 VNRAR---YMPQNPHIIATKTPSSDVLVFDYTKHPA--KPDPSGECNPDLRLRGHQ--KE 222
Query: 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH--LSRHK 123
+ L+W N SG L++ D ++ +W+ I++G G + A + H
Sbjct: 223 GYG-LSWNSNLSGH------LLSAS-DDHTVCLWD----INAGPKEGKIVDAKAIFTGHS 270
Query: 124 GPVRGLEFNSFTPNLLASGADDGEICIWDL--SAPAEPSHFPPLRGNGSAAQGEISFVSW 181
V + ++ +L S ADD ++ IWD + ++PSH A E++ +S+
Sbjct: 271 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLV------DAHTAEVNCLSF 324
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
N + ILA+ S + T +WDL+ K + ES K + W+P T ++ +S D
Sbjct: 325 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET-ILASSGTDR 383
Query: 242 SPALRLWDMRNTMS-----------PVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
L +WD+ P F+ GHT + SW PN+ + + ++DN
Sbjct: 384 R--LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 441
Query: 289 TICW 292
W
Sbjct: 442 MQIW 445
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 45/178 (25%), Positives = 82/178 (46%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSH--FPPLRGNGSAAQGEI 176
L H+G G+ +++ L + DDG IC WD++A S P + G ++ E
Sbjct: 167 LKGHEGEGYGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAED 226
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS-FSESIKRRCSVLQWNPDVATQLVV 235
VS+++ + S + +WDL++ KP ++ + + C + +NP + ++
Sbjct: 227 --VSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNC--ITFNP-FSEYILA 281
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
D + AL WDMRN + H + +S+ P+ + L + D+R I WD
Sbjct: 282 TGSVDKTVAL--WDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWD 337
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 56/226 (24%), Positives = 99/226 (43%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEP--SHF-PPLRGNGSAAQGEIS 177
H G V + P ++AS ++ I+D + P+EP + F P LR G +GE
Sbjct: 118 HPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPKDTKFRPQLRLKGH--EGEGY 175
Query: 178 FVSW-NSKVQHILASTSYNGTTVVWDLKKQKPV---ISFSESIKRRCSVLQWNPDVATQL 233
+SW N++ H+L + +G WD+ + + I K S + A
Sbjct: 176 GMSWSNTREGHLLTAGD-DGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHN 234
Query: 234 VVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC-W 292
V L LWD+R + P VGHT V +++ P S Y+L ++T+ W
Sbjct: 235 FVFGSVGDDRKLNLWDLRQS-KPQLTAVGHTAEVNCITFNPF-SEYILATGSVDKTVALW 292
Query: 293 DTVS-GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
D + + + L + F + + P V+++S D ++ +++I
Sbjct: 293 DMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDI 338
Score = 121 (47.7 bits), Expect = 0.00043, P = 0.00043
Identities = 55/247 (22%), Positives = 102/247 (41%)
Query: 72 WGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLI--AHLSRHKGPVRGL 129
+G + S + + L L AG DG I W+ I++ +T ++ + H +
Sbjct: 175 YGMSWSNTREGHL-LTAGD--DGMICHWD----INANQTISGQIVPQSKFKGHSSNAEDV 227
Query: 130 EFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHIL 189
F++ + S DD ++ +WDL P L G A E++ +++N ++IL
Sbjct: 228 SFHALHNFVFGSVGDDRKLNLWDLRQSK-----PQLTAVGHTA--EVNCITFNPFSEYIL 280
Query: 190 ASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWD 249
A+ S + T +WD++ + + + + ++P T L + +D + +WD
Sbjct: 281 ATGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDR---VIVWD 337
Query: 250 MRNTMSPVKE-------------FV--GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDT 294
+ P F+ GHT V SW PN + + + N W+
Sbjct: 338 ISKIQDPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNALQVWE- 396
Query: 295 VSGEIVS 301
VS +VS
Sbjct: 397 VSNSLVS 403
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 43/179 (24%), Positives = 81/179 (45%)
Query: 119 LSRHKGPVRGLEFN-SFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEIS 177
L H+ GL +N + + NLL S +DD IC+WD+S + + + +
Sbjct: 173 LRGHQKEGYGLSWNPNLSGNLL-SASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVE 231
Query: 178 FVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVLQWNPDVATQLV 234
VSW+ + + S + + ++WD + KP S ++ + L +NP ++ +
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNP--YSEFI 288
Query: 235 VASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
+A+ + + LWD+RN + F H + + W P++ + L + D R WD
Sbjct: 289 LATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 151 (58.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 52/217 (23%), Positives = 102/217 (47%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H V L T LLA+G DD + +W ++ +P+ L G+ + I +
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVN---KPNCVMSLTGHTTP----IESLQI 71
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
++K + I+A S +G+ VWDL+ K + + CS L ++P V + D+
Sbjct: 72 SAKEELIVAG-SQSGSIRVWDLEAAKILRTLLGHKANICS-LDFHP--YGSFVASGSLDT 127
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301
++LWD+R + ++ HT+ V + + P D +L + A D+ WD +G+++
Sbjct: 128 D--IKLWDVRRK-GCIFKYKSHTQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKVMF 183
Query: 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
E + + ++P ++++ S D I +++E
Sbjct: 184 EFTGHSGPVNVVEFHPS-EYLLASGSSDRTIRFWDLE 219
Score = 63 (27.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 465 PPQATQPNFTAPAPAPVTSQPAMRPFIP---STP-PVLRNAEQYQQPTLGS 511
PP +P P P+T++ A++P P TP P E +Q+P + S
Sbjct: 395 PPHINEPFPAPPEDEPITAKEAVKPNQPVEVQTPLPKQELPETFQRPPIAS 445
Score = 40 (19.1 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 464 IPPQATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRN 500
+P Q F P P+ S M PS P RN
Sbjct: 429 LPKQELPETFQRP---PIASSTPMPRAEPSVIPAARN 462
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 166 (63.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 63/269 (23%), Positives = 120/269 (44%)
Query: 81 DFS--LGLVAGGLVDGSIDIW--------NPLSLISSGETGGNPLIAHLSRHKGPVRGLE 130
DFS + A G D I IW NP +++ + +P L H G V
Sbjct: 473 DFSDDCRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTS 532
Query: 131 FNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILA 190
F+ LL SG++D + +W + + +G+ ++SF S + H A
Sbjct: 533 FSPDNKYLL-SGSEDKTVRLWSMDTHTALVSY---KGHNHPVW-DVSF----SPLGHYFA 583
Query: 191 STSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDM 250
+ S++ T +W P+ F+ + + ++P+ +SD+ R+WD+
Sbjct: 584 TASHDQTARLWSCDHIYPLRIFAGHLND-VDCVSFHPNGCYVFTGSSDK----TCRMWDV 638
Query: 251 RNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA-GTNW 309
+T V+ F+GHT VI+++ CP D +L T ++D WD +G+ + ++ G N
Sbjct: 639 -STGDSVRLFLGHTAPVISIAVCP-DGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNA 696
Query: 310 NFDIHWYPKIPGVISASSFDGKIGIYNIE 338
+ + Y K V+ + D + +++++
Sbjct: 697 IYSLS-YSKEGNVLISGGADHTVRVWDLK 724
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 70/268 (26%), Positives = 114/268 (42%)
Query: 54 DLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGN 113
DL L G E + L+W N SG L++ D +I +W+ ++ G+
Sbjct: 170 DLRLRGHQ--KEGYG-LSWNPNLSGC------LLSAS-DDHTICLWDISTVPKEGKIVDA 219
Query: 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA--PAEPSHFPPLRGNGSA 171
I + H V + ++ +L S ADD ++ IWD + ++PSH A
Sbjct: 220 KTI--FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAV------DA 271
Query: 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231
E++ +S+N + ILA+ S + T +WDL+ K + ES K +QW+P T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 232 QLVVASDEDSSPALRLWDMRNT---MSPVKE--------FV--GHTKGVIAMSWCPNDSS 278
++ +S D L +WD+ SP F+ GHT + SW PN+
Sbjct: 332 -ILASSGTDRR--LNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 279 YLLTCAKDNRTICWDTVSGEIVSELPAG 306
+ + ++DN W E P G
Sbjct: 389 VICSVSEDNIMQVWQMAENIYNDEDPEG 416
Score = 156 (60.0 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 54/236 (22%), Positives = 96/236 (40%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H+ GL +N L S +DD IC+WD+S + + + +
Sbjct: 173 LRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVED 232
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVLQWNPDVATQLVV 235
VSW+ + + S + + ++WD + KP + ++ + L +NP ++ ++
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAV-DAHTAEVNCLSFNP--YSEFIL 289
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295
A+ + + LWD+RN + F H + + W P++ + L + D R WD
Sbjct: 290 ATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
Query: 296 S-GEIVS---------EL---PAGTNWNF-DIHWYPKIPGVISASSFDGKIGIYNI 337
GE S EL G D W P P VI + S D + ++ +
Sbjct: 349 KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/244 (22%), Positives = 101/244 (41%)
Query: 108 GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF---- 162
G G I H+G V + P ++A+ ++ ++D + P++P
Sbjct: 109 GSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECT 168
Query: 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRR 219
P LR G +G +SWN + L S S + T +WD+ K+ ++
Sbjct: 169 PDLRLRGHQKEGY--GLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGH 226
Query: 220 CSVLQWNPDVATQLVVASDEDS---SPALRLWDMR--NTMSPVKEFVGHTKGVIAMSWCP 274
+V++ DV+ L+ S S L +WD R NT P HT V +S+ P
Sbjct: 227 TAVVE---DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNP 283
Query: 275 NDSSYLLTCAKDNRTICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333
L T + D WD + ++ + + + F + W P ++++S D ++
Sbjct: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 334 IYNI 337
++++
Sbjct: 344 VWDL 347
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 165 (63.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 68/271 (25%), Positives = 103/271 (38%)
Query: 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVR---GLEFNSFTPN-- 137
S L+A G D + IW+ +S T N L+ KG + S N
Sbjct: 366 SRDLLASGSGDSTARIWD----MSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNCD 421
Query: 138 --LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195
LLA+G+ DG IW L +G I + WN +IL S +
Sbjct: 422 GSLLATGSYDGYARIWKTDGR--------LASTLGQHKGPIFALKWNKCGNYIL-SAGVD 472
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
TT++WD + F+ V W + A S + RL
Sbjct: 473 KTTIIWDASTGQCTQQFAFHSAPALDV-DWQTNQA--FASCSTDQRIHVCRL----GVNE 525
Query: 256 PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHW 315
P+K F GHT V A+ WCP L +C+ D W +L A + + I W
Sbjct: 526 PIKTFKGHTNEVNAIKWCPQ-GQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKW 584
Query: 316 YPKIPG--------VISASSFDGKIGIYNIE 338
P PG +++++SFD + ++++E
Sbjct: 585 SPTGPGTNNPNTNLILASASFDSTVRLWDVE 615
Score = 136 (52.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 53/223 (23%), Positives = 102/223 (45%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H P +++ T AS + D I + L EP +G+ + E++ + W
Sbjct: 492 HSAPALDVDWQ--TNQAFASCSTDQRIHVCRLGVN-EP--IKTFKGHTN----EVNAIKW 542
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNP------DVATQLVV 235
+ Q +LAS S + T +W + + + ++ + ++W+P + T L++
Sbjct: 543 CPQGQ-LLASCSDDMTLKIWSMNRDRCCHDL-QAHSKEIYTIKWSPTGPGTNNPNTNLIL 600
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295
AS S +RLWD+ S + HT+ V ++++ P D +L + + D W T
Sbjct: 601 ASASFDS-TVRLWDVERG-SCIHTLTKHTEPVYSVAFSP-DGKHLASGSFDKCVHIWSTQ 657
Query: 296 SGEIVSELPAGTNWNFDIHWYPKIPGV-ISASSFDGKIGIYNI 337
+G++V GT F++ W K G + AS+ DG + + ++
Sbjct: 658 TGQLVHSYK-GTGGIFEVCWNSK--GTKVGASASDGSVFVLDL 697
Score = 135 (52.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 73/308 (23%), Positives = 125/308 (40%)
Query: 53 RDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGL-VDGSIDI----WN-PLSLIS 106
RDLL G S+ R ++ S + GG V + D+ WN SL++
Sbjct: 367 RDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNCDGSLLA 426
Query: 107 SGETGG--------NPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE 158
+G G L + L +HKGP+ L++N +L++G D I IWD S
Sbjct: 427 TGSYDGYARIWKTDGRLASTLGQHKGPIFALKWNKCGNYILSAGVDKTTI-IWDASTGQC 485
Query: 159 PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR 218
F SA + V W + AS S + V L +P+ +F +
Sbjct: 486 TQQF----AFHSAPALD---VDWQTN--QAFASCSTDQRIHVCRLGVNEPIKTF-KGHTN 535
Query: 219 RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPN--- 275
+ ++W P QL+ + +D + L++W M N + H+K + + W P
Sbjct: 536 EVNAIKWCPQ--GQLLASCSDDMT--LKIWSM-NRDRCCHDLQAHSKEIYTIKWSPTGPG 590
Query: 276 ----DSSYLLTCAKDNRTI-CWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDG 330
+++ +L A + T+ WD G + L T + + + P + S S FD
Sbjct: 591 TNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGS-FDK 649
Query: 331 KIGIYNIE 338
+ I++ +
Sbjct: 650 CVHIWSTQ 657
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 163 (62.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 75/270 (27%), Positives = 111/270 (41%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIA-HLSRHKG---P----VRGLEFNSFTPN 137
L+A G D + IWN L+ S+G G L+ H R G P V L++NS
Sbjct: 193 LLASGSGDSTARIWN-LNENSNG--GSTQLVLRHCIREGGHDVPSNKDVTSLDWNS-DGT 248
Query: 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGT 197
LLA G+ DG IW E + G +G I + WN K ++L S + T
Sbjct: 249 LLAMGSYDGFARIW-----TENGNLASTLGQH---KGPIFALKWNKKGNYVL-SAGVDKT 299
Query: 198 TVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPV 257
T++WD + F V W ++ S + RL PV
Sbjct: 300 TIIWDAHTGEAKQQFPFHSAPALDV-DWQNNMT--FASCSTDMCIHVCRL----GCDHPV 352
Query: 258 KEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWDTVSGEIVSELPAGTNWNFDIHWY 316
K F GHT V A+ W P S LL D+ T+ W V +L A + + I W
Sbjct: 353 KTFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWS 410
Query: 317 PKIPG--------VISASSFDGKIGIYNIE 338
P P +++++SFD + ++++E
Sbjct: 411 PTGPATSNPNSSIMLASASFDSTVRLWDVE 440
Score = 147 (56.8 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 67/264 (25%), Positives = 110/264 (41%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD 145
L+A G DG IW GN L + L +HKGP+ L++N +L++G D
Sbjct: 249 LLAMGSYDGFARIWTE---------NGN-LASTLGQHKGPIFALKWNKKGNYVLSAGVDK 298
Query: 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK 205
I IWD FP SA + V W + + AS S + V L
Sbjct: 299 TTI-IWDAHTGEAKQQFP----FHSAPALD---VDWQNNMT--FASCSTDMCIHVCRLGC 348
Query: 206 QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTK 265
PV +F + + ++W+P + +++AS D L++W M+ V + H+K
Sbjct: 349 DHPVKTF-QGHTNEVNAIKWDP---SGMLLASCSDDM-TLKIWSMKQDAC-VHDLQAHSK 402
Query: 266 GVIAMSWCPN-------DSSYLLTCAKDNRTI-CWDTVSGEIVSELPAGTNWNFDIHWYP 317
+ + W P +SS +L A + T+ WD G L + + + P
Sbjct: 403 EIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSP 462
Query: 318 KIPGVISASSFDGKIGIYNIEGCS 341
+++ SFD + I+N + S
Sbjct: 463 D-GKYLASGSFDKYVHIWNTQSGS 485
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 76/317 (23%), Positives = 143/317 (45%)
Query: 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDI 98
+N ++ LD+ S D LL +G S + F R+ W +NG+ + +LG G + ++
Sbjct: 234 SNKDVTSLDWNS-DGTLLAMG---SYDGFARI-WTENGNLAS--TLGQHKGPIF--ALK- 283
Query: 99 WNPLS--LISSGETGGNPLI--AHLSR-------HKGPVRGLEF-NSFTPNLLASGADDG 146
WN ++S+G +I AH H P +++ N+ T AS + D
Sbjct: 284 WNKKGNYVLSAG-VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMT---FASCSTD- 338
Query: 147 EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ 206
+CI + H P++ E++ + W+ +LAS S + T +W +K Q
Sbjct: 339 -MCIHVCRLGCD--H--PVK-TFQGHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMK-Q 390
Query: 207 KPVISFSESIKRRCSVLQWNPD-VATQ-----LVVASDEDSSPALRLWDMRNTMSPVKEF 260
+ ++ + ++W+P AT +++AS S +RLWD+ +
Sbjct: 391 DACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDS-TVRLWDVEQGVC-THTL 448
Query: 261 VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIP 320
+ H + V ++++ P D YL + + D W+T SG +V GT F++ W +
Sbjct: 449 MKHQEPVYSVAFSP-DGKYLASGSFDKYVHIWNTQSGSLVHSYQ-GTGGIFEVCWNAR-G 505
Query: 321 GVISASSFDGKIGIYNI 337
+ AS+ DG + + ++
Sbjct: 506 DKVGASASDGSVCVLDL 522
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 58/227 (25%), Positives = 96/227 (42%)
Query: 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS 211
D+ P P+ LRG+ S E+ +WN V +LAS S + T +W+L + S
Sbjct: 164 DVEIP--PNKATVLRGHES----EVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGS 216
Query: 212 FSESIKRRCSVLQWNPDVATQLVVAS-DEDSSPAL----------RLWDMRNTMSPVKEF 260
++ + R C + + DV + V S D +S L R+W ++
Sbjct: 217 -TQLVLRHC-IREGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLAST--- 271
Query: 261 VGHTKG-VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKI 319
+G KG + A+ W +Y+L+ D TI WD +GE + P + D+ W +
Sbjct: 272 LGQHKGPIFALKW-NKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNM 330
Query: 320 PGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAG 366
++ S D I + + GC + V + A KW P+G
Sbjct: 331 --TFASCSTDMCIHVCRL-GCD-HPVKTFQGHTNEVNAIKW--DPSG 371
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 162 (62.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 73/268 (27%), Positives = 108/268 (40%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGP--VRGLEFNSFTPN----LL 139
L+A G D + IWN +SG T ++ H R G + S N LL
Sbjct: 192 LLASGSGDSTARIWNLNENSNSGST--QLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLL 249
Query: 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTV 199
A+G+ DG IW E + G +G I + WN K +IL S + TT+
Sbjct: 250 ATGSYDGFARIW-----TEDGNLASTLGQH---KGPIFALKWNKKGNYIL-SAGVDKTTI 300
Query: 200 VWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE 259
+WD + F V W + T S + RL R PVK
Sbjct: 301 IWDAHTGEAKQQFPFHSAPALDV-DWQNN--TTFASCSTDMCIHVCRLGCDR----PVKT 353
Query: 260 FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWDTVSGEIVSELPAGTNWNFDIHWYPK 318
F GHT V A+ W P S LL D+ T+ W V +L A + + I W P
Sbjct: 354 FQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPT 411
Query: 319 IPG--------VISASSFDGKIGIYNIE 338
PG +++++SFD + +++++
Sbjct: 412 GPGTSNPNSNIMLASASFDSTVRLWDVD 439
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 39/169 (23%), Positives = 81/169 (47%)
Query: 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNP------D 228
E++ + W+ +LAS S + T +W +K Q + ++ + ++W+P +
Sbjct: 360 EVNAIKWDPSGM-LLASCSDDMTLKIWSMK-QDTCVHDLQAHSKEIYTIKWSPTGPGTSN 417
Query: 229 VATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ +++AS S +RLWD+ + + H + V ++++ P D YL + + D
Sbjct: 418 PNSNIMLASASFDS-TVRLWDVDRGVC-IHTLTKHQEPVYSVAFSP-DGKYLASGSFDKC 474
Query: 289 TICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
W+T SG +V GT F++ W + + AS+ DG + + ++
Sbjct: 475 VHIWNTQSGTLVHSY-RGTGGIFEVCWNAR-GDKVGASASDGSVCVLDL 521
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 53/203 (26%), Positives = 87/203 (42%)
Query: 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS 211
D+ P P+ LRG+ S E+ +WN V +LAS S + T +W+L + S
Sbjct: 163 DVEIP--PNKATVLRGHES----EVFICAWNP-VSDLLASGSGDSTARIWNLNENSNSGS 215
Query: 212 FSESIKRRCSVLQWNPDVATQLVVAS-DEDSSPAL----------RLWDMRNTMSPVKEF 260
++ + R C + + DV + V S D +S L R+W ++
Sbjct: 216 -TQLVLRHC-IREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLAST--- 270
Query: 261 VGHTKG-VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKI 319
+G KG + A+ W +Y+L+ D TI WD +GE + P + D+ W
Sbjct: 271 LGQHKGPIFALKW-NKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNT 329
Query: 320 PGVISASSFDGKIGIYNIEGCSR 342
++ S D I + + GC R
Sbjct: 330 --TFASCSTDMCIHVCRL-GCDR 349
>DICTYBASE|DDB_G0275073 [details] [associations]
symbol:pwp1 "periodic tryptophan protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0275073 GO:GO:0005829 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0006364 KO:K14791
OMA:ICARNED RefSeq:XP_643788.1 ProteinModelPortal:Q869X0
STRING:Q869X0 EnsemblProtists:DDB0235359 GeneID:8619833
KEGG:ddi:DDB_G0275073 InParanoid:Q869X0 ProtClustDB:CLSZ2455247
Uniprot:Q869X0
Length = 569
Score = 162 (62.1 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 49/178 (27%), Positives = 83/178 (46%)
Query: 169 GSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPD 228
GS G +S +SWNS +++LAS S + T VWD+ Q+ + +F+ K + S L WN
Sbjct: 260 GSHRDGVMS-LSWNSHQRNVLASGSSDNTVKVWDITTQQCLNTFTHH-KDKVSCLHWNSH 317
Query: 229 VATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVI-AMSWCPNDSSYLLTCAKDN 287
T L++ S + L D+R +P + KG + ++SW P++ + D
Sbjct: 318 EKTALLIGSHDKHVSIL---DVR---APDSAYKWSVKGEVESLSWNPHNPKEFIVGTDDG 371
Query: 288 RTICWDTVSGEIVS---ELPAGTNWNFDIHWY-PKIPGVISASSFDGKIGIYNIEGCS 341
R +C+D G + + A + Y P G + S D + ++N+E S
Sbjct: 372 RLLCYDATLGTAAAPVWSVQASQKGSVSCFSYCPGQVGFFATGSSDHTVKLWNLETSS 429
Score = 158 (60.7 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 50/211 (23%), Positives = 93/211 (44%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD 145
++ GG + S D P+ S+ + GG H+ V L +NS N+LASG+ D
Sbjct: 229 VILGGKEEDSAD---PMKKPSAKKRGGKHNKFKEGSHRDGVMSLSWNSHQRNVLASGSSD 285
Query: 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK 205
+ +WD++ + F + + ++S + WNS + L S++ + D++
Sbjct: 286 NTVKVWDITTQQCLNTF-------THHKDKVSCLHWNSHEKTALLIGSHDKHVSILDVRA 338
Query: 206 QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWD--MRNTMSPVKEFVGH 263
P ++ S+K L WNP + +V +D+ L +D + +PV
Sbjct: 339 --PDSAYKWSVKGEVESLSWNPHNPKEFIVGTDDGR---LLCYDATLGTAAAPVWSVQAS 393
Query: 264 TKGVIA-MSWCPNDSSYLLTCAKDNRTICWD 293
KG ++ S+CP + T + D+ W+
Sbjct: 394 QKGSVSCFSYCPGQVGFFATGSSDHTVKLWN 424
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 148 (57.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 53/217 (24%), Positives = 100/217 (46%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H V L T LLA+G DD + +W + A+ H L G+ + I +
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSV---AQLRH-DLLTGHTTP----IESLQI 70
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
++K + I+A S +G+ VWDL+ K + + CS L ++P V + D+
Sbjct: 71 SAKEELIVAG-SQSGSIRVWDLEAAKILRTLLGHKANICS-LDFHP--YGSFVASGSLDT 126
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301
++LWD+R + ++ HT+ V + + P D +L + A D+ WD +G+++
Sbjct: 127 D--IKLWDVRRK-GCIFKYKSHTQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKVMF 182
Query: 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
E + ++P I ++++ S I +++E
Sbjct: 183 EFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLE 219
Score = 129 (50.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 51/186 (27%), Positives = 86/186 (46%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L+ H P+ L+ ++ L+ +G+ G I +WDL A L G+ A + F
Sbjct: 58 LTGHTTPIESLQISA-KEELIVAGSQSGSIRVWDLEAA---KILRTLLGH-KANICSLDF 112
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVAS 237
+ S V AS S + +WD++++ + + + RC L+++PD L A+
Sbjct: 113 HPYGSFV----ASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRC--LRFSPD-GKWLASAA 165
Query: 238 DEDSSPALRLWDMRNTMSPVK-EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWDTV 295
D+ + ++LWD+ T V EF GH V + + P+ YLL + TI WD
Sbjct: 166 DDHT---VKLWDL--TAGKVMFEFTGHYGPVNVVEFHPS-IEYLLASGSSSMTIRFWDLE 219
Query: 296 SGEIVS 301
+VS
Sbjct: 220 KFHVVS 225
Score = 63 (27.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 465 PPQATQPNFTAPAPAPVTSQPAMRPFIP---STP-PVLRNAEQYQQPTLGS 511
PP +P P P+T++ A++P P TP P E +Q+P + S
Sbjct: 395 PPHINEPFPAPPEDEPITAKEAVKPNQPVEVQTPLPKQELPETFQRPPIAS 445
Score = 40 (19.1 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 464 IPPQATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRN 500
+P Q F P P+ S M PS P RN
Sbjct: 429 LPKQELPETFQRP---PIASSTPMPRAEPSVIPAARN 462
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 160 (61.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 52/204 (25%), Positives = 93/204 (45%)
Query: 139 LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198
LA+GA D +C+W S P LR G A+ + V+++ + L S S++ T
Sbjct: 238 LATGAADNTVCLWKASQST-----PLLRLEGHLAR--VGRVAFHPSGDY-LVSASFDTTW 289
Query: 199 VVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVK 258
+WD+ ++ E + PD + LV + D+ R+WD+R+ S +
Sbjct: 290 RLWDVHTGVELL-MQEGHSEGIFSIACQPDGS--LVSSGGNDAIG--RIWDLRSGKS-IM 343
Query: 259 EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPK 318
H + ++AM+W PN L T + D+ WD + +PA ++ D+ +
Sbjct: 344 VLDEHIRQIVAMAWSPNGYQ-LATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIES 402
Query: 319 -IPGVISASSFDGKIGIYNIEGCS 341
+ I+ S +DG + ++N CS
Sbjct: 403 GVNRFIATSGYDGCVKLWNPLNCS 426
Score = 120 (47.3 bits), Expect = 0.00067, P = 0.00067
Identities = 50/222 (22%), Positives = 100/222 (45%)
Query: 125 PVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV---SW 181
P+ + F++ N ASG+ G++ +W+ +E F RG+ G + +W
Sbjct: 174 PIAIVRFSN-NGNHFASGSWGGQVKVWNSDNLSEVQLF---RGHTDRVSGLDWYPLCQAW 229
Query: 182 NSKVQHI-LASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED 240
++ + + LA+ + + T +W + P++ E R + ++P LV AS +
Sbjct: 230 DADSEQLTLATGAADNTVCLWKASQSTPLLRL-EGHLARVGRVAFHPS-GDYLVSASFDT 287
Query: 241 SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV 300
+ RLWD+ + + + GH++G+ +++ C D S + + D WD SG+ +
Sbjct: 288 T---WRLWDVHTGVELLMQ-EGHSEGIFSIA-CQPDGSLVSSGGNDAIGRIWDLRSGKSI 342
Query: 301 SELPAGTNWNFDIHWYPKIPGV-ISASSFDGKIGIYNIEGCS 341
L + W P G ++ SS D + I+++ S
Sbjct: 343 MVLDEHIRQIVAMAWSPN--GYQLATSSADDTVKIWDLRKVS 382
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 59/239 (24%), Positives = 104/239 (43%)
Query: 102 LSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN-LLASGADDGEICIWDLSAPAEPS 160
L L + + G PL + H V ++++ L+ SG+ D + +WD P +
Sbjct: 87 LQLWDTAKATG-PLQVY-KEHTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWD---PTVGN 141
Query: 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ--KPVISFSESIKR 218
RG+ S I W+ + AS S + T +WD+K + VI ++
Sbjct: 142 SLCTFRGHESVIYSTI----WSPHIPGCFASASGDQTLRIWDVKTTGVRIVIPAHQAEIL 197
Query: 219 RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS 278
C ++N + L+V D S LR WD+RN PV E +GHT + + + P +S
Sbjct: 198 SCDWCKYNEN----LLVTGAVDCS--LRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHAS 251
Query: 279 YLLTCAKDNRTICWDTVSGE-IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336
L +C+ D W+ + ++ + T + + + P ++ S+D + IYN
Sbjct: 252 VLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTEVADCSWDETVKIYN 310
Score = 127 (49.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 48/202 (23%), Positives = 92/202 (45%)
Query: 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWN-SKVQHILASTSYN 195
++L + + DG + +WD +A A PL+ Q E+ V W+ ++ + ++ S S++
Sbjct: 76 HVLVTCSGDGSLQLWD-TAKATG----PLQVYKEHTQ-EVYSVDWSQTRDEQLVVSGSWD 129
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
T VWD + +F S + W+P + AS + + LR+WD++ T
Sbjct: 130 QTVKVWDPTVGNSLCTFRGHESVIYSTI-WSPHIPGCFASASGDQT---LRIWDVKTTGV 185
Query: 256 PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS-GEIVSELPAGTNWNFDIH 314
+ H +++ WC + + L+T A D WD + + V EL T +
Sbjct: 186 RIV-IPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVK 244
Query: 315 WYPKIPGVISASSFDGKIGIYN 336
+ P V+++ S+D + +N
Sbjct: 245 FSPFHASVLASCSYDFTVRFWN 266
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
Q++P +++LV S + ++ RLWD +T +P+ GHT V ++W P D+S + T
Sbjct: 141 QFSPSTSSRLVTGSGDFTA---RLWDC-DTQTPIATMKGHTNWVSCVAWAP-DASIIATG 195
Query: 284 AKDNRTICWDTVSGEIVSE-LPAGTNWNFDIHWYP------KIPGVISASSFDGKIGIYN 336
+ DN WD G + + L T + W P P ++++ S D + I+N
Sbjct: 196 SMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWN 255
Query: 337 IEGCSRYGVGDSNFSAAPLRAPKW 360
++ R + + AP+ +W
Sbjct: 256 VK--LRTLLFTLSGHTAPITCVRW 277
Score = 120 (47.3 bits), Expect = 0.00076, P = 0.00076
Identities = 40/187 (21%), Positives = 80/187 (42%)
Query: 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEI 176
A ++ H G + +F+ T + L +G+ D +WD P ++G+ + +
Sbjct: 128 ASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQT-P--IATMKGHTNW----V 180
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNP-----DVAT 231
S V+W I+A+ S + T WD KK P+ + L W P D
Sbjct: 181 SCVAWAPDAS-IIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGP 239
Query: 232 QLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC 291
L+ + +D++ +R+W+++ + + GHT + + W +++ + + D
Sbjct: 240 YLLASGSKDNT--VRIWNVK-LRTLLFTLSGHTAPITCVRW--GGQNWIYSSSYDKTIRI 294
Query: 292 WDTVSGE 298
WD G+
Sbjct: 295 WDAKDGK 301
Score = 113 (44.8 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 37/156 (23%), Positives = 74/156 (47%)
Query: 139 LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198
L S +DD ++ +WD +P + G+ Q ++ S+ S +A+ S++ +
Sbjct: 361 LVSASDDLQLILWDPQKSTKP--ITKMHGH----QKVVNHASF-SPDGRCIATASFDSSV 413
Query: 199 VVWDLKKQKPVISFSESIKR--RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSP 256
+WD K K + + + +C+ W+ D ++L+V+S +D++ L++WD+R+
Sbjct: 414 RLWDGKTGKFLATLRGHVAAVYQCA---WSTD--SRLLVSSSQDTT--LKVWDVRSKKMK 466
Query: 257 VKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
+ GH V A+ W P D + + D W
Sbjct: 467 F-DLPGHEDQVFAVDWSP-DGQRVASGGADKAVRIW 500
Score = 110 (43.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 189 LASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLW 248
L S S + ++WD +K I+ ++ + ++PD + + + DSS +RLW
Sbjct: 361 LVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPD--GRCIATASFDSS--VRLW 416
Query: 249 DMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTN 308
D + T + GH V +W DS L++ ++D WD S ++ +LP +
Sbjct: 417 DGK-TGKFLATLRGHVAAVYQCAWS-TDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHED 474
Query: 309 WNFDIHWYPKIPGVISASSFDGKIGIYN 336
F + W P V S + D + I++
Sbjct: 475 QVFAVDWSPDGQRVASGGA-DKAVRIWS 501
Score = 98 (39.6 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 50/189 (26%), Positives = 78/189 (41%)
Query: 25 GTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84
GT+ A S S+S+ L DF + D ++P + W + + D S+
Sbjct: 135 GTIISA-QFSPSTSSRLVTGSGDFTARLWDCDT--QTPIATMKGHTNWVSCVAWAPDASI 191
Query: 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT------PNL 138
+A G +D +I W+P G+P+ L RH P+ L + P L
Sbjct: 192 --IATGSMDNTIRFWDPKK--------GSPIGDALRRHTKPIMALCWQPLHLAPDSGPYL 241
Query: 139 LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198
LASG+ D + IW++ L S I+ V W Q+ + S+SY+ T
Sbjct: 242 LASGSKDNTVRIWNVKLRT-------LLFTLSGHTAPITCVRWGG--QNWIYSSSYDKTI 292
Query: 199 VVWDLKKQK 207
+WD K K
Sbjct: 293 RIWDAKDGK 301
Score = 53 (23.7 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 1 MACIKG-INRSASVAFAPDAPYMAAGTMAGAV 31
+A +KG N + VA+APDA +A G+M +
Sbjct: 170 IATMKGHTNWVSCVAWAPDASIIATGSMDNTI 201
>CGD|CAL0001341 [details] [associations]
symbol:orf19.6355 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 149 (57.5 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 61/232 (26%), Positives = 110/232 (47%)
Query: 33 LSFSSSANLEIFKLDFQSEDRDLLLVGES-P-SSER-FNRLAWGKNGSG-SEDFSLGLVA 88
L+ S S N E++ D ++ + G P SS+R + + N G D+S +
Sbjct: 235 LTASMSENGEVYIFDLSAQYKAFDTPGYMIPKSSKRPIHTIRAHGNVEGYGLDWSPLVNT 294
Query: 89 GGLVDGSID--IWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDG 146
G L+ G + I+ SS T P A S + +++++ + A+G DG
Sbjct: 295 GALLSGDMSGRIYLTNRTTSSWTTDKTPFFASQSS----IEDIQWSTGETTVFATGGCDG 350
Query: 147 EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK- 205
I IWD + H P L + A++ +++ +SW+SK+ H+LAS +G+ VWDL+
Sbjct: 351 YIRIWDTRSK---KHKPAL--SVIASKSDVNVISWSSKINHLLASGHDDGSWGVWDLRNF 405
Query: 206 -------QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDM 250
PV ++ + K + + +NP + ++ S ED++ + LWD+
Sbjct: 406 TNNTTSNPSPVANY-DFHKSPITSISFNP-LDESIIAVSSEDNT--VTLWDL 453
Score = 144 (55.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 64/266 (24%), Positives = 112/266 (42%)
Query: 47 DFQSEDRDLLLVGES-PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLI 105
D D D +L ES P NR+ + + ++ L A +G + I++ +
Sbjct: 198 DDDDVDSDPILDSESIPLRHTTNRIRVSPHAQQTGEY---LTASMSENGEVYIFDLSAQY 254
Query: 106 SSGETGGN--PLIA----HLSRHKGPVRG--LEFNSFT-PNLLASGADDGEICIWDLSAP 156
+ +T G P + H R G V G L+++ L SG G I + + +
Sbjct: 255 KAFDTPGYMIPKSSKRPIHTIRAHGNVEGYGLDWSPLVNTGALLSGDMSGRIYLTNRTTS 314
Query: 157 AEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDL--KKQKPVISFSE 214
+ + P A+Q I + W++ + A+ +G +WD KK KP +S
Sbjct: 315 SWTTDKTPF----FASQSSIEDIQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVIA 370
Query: 215 SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN-------TMSPVKEFVGHTKGV 267
S K +V+ W+ + L+ + +D S + WD+RN SPV + H +
Sbjct: 371 S-KSDVNVISWSSKI-NHLLASGHDDGSWGV--WDLRNFTNNTTSNPSPVANYDFHKSPI 426
Query: 268 IAMSWCPNDSSYLLTCAKDNRTICWD 293
++S+ P D S + ++DN WD
Sbjct: 427 TSISFNPLDESIIAVSSEDNTVTLWD 452
Score = 120 (47.3 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 25/106 (23%), Positives = 50/106 (47%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD 145
L+A G DGS +W+ + ++ + +P +A+ HK P+ + FN +++A ++D
Sbjct: 387 LLASGHDDGSWGVWDLRNFTNNTTSNPSP-VANYDFHKSPITSISFNPLDESIIAVSSED 445
Query: 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQG---EISFVSWNSKVQHI 188
+ +WDL+ A+ R ++ FV W V+ +
Sbjct: 446 NTVTLWDLAVEADDEEISQQRKEAQELHDIPPQLLFVHWQRDVKDV 491
Score = 57 (25.1 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 312 DIHWYPKIPGVISASSFDG 330
D+ W+P+IPG + ++ DG
Sbjct: 490 DVRWHPQIPGCLVSTGGDG 508
>UNIPROTKB|Q59PD8 [details] [associations]
symbol:RRB1 "Likely nucleolar ribosome biogenesis factor
Rrb1p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 149 (57.5 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 61/232 (26%), Positives = 110/232 (47%)
Query: 33 LSFSSSANLEIFKLDFQSEDRDLLLVGES-P-SSER-FNRLAWGKNGSG-SEDFSLGLVA 88
L+ S S N E++ D ++ + G P SS+R + + N G D+S +
Sbjct: 235 LTASMSENGEVYIFDLSAQYKAFDTPGYMIPKSSKRPIHTIRAHGNVEGYGLDWSPLVNT 294
Query: 89 GGLVDGSID--IWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDG 146
G L+ G + I+ SS T P A S + +++++ + A+G DG
Sbjct: 295 GALLSGDMSGRIYLTNRTTSSWTTDKTPFFASQSS----IEDIQWSTGETTVFATGGCDG 350
Query: 147 EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK- 205
I IWD + H P L + A++ +++ +SW+SK+ H+LAS +G+ VWDL+
Sbjct: 351 YIRIWDTRSK---KHKPAL--SVIASKSDVNVISWSSKINHLLASGHDDGSWGVWDLRNF 405
Query: 206 -------QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDM 250
PV ++ + K + + +NP + ++ S ED++ + LWD+
Sbjct: 406 TNNTTSNPSPVANY-DFHKSPITSISFNP-LDESIIAVSSEDNT--VTLWDL 453
Score = 144 (55.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 64/266 (24%), Positives = 112/266 (42%)
Query: 47 DFQSEDRDLLLVGES-PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLI 105
D D D +L ES P NR+ + + ++ L A +G + I++ +
Sbjct: 198 DDDDVDSDPILDSESIPLRHTTNRIRVSPHAQQTGEY---LTASMSENGEVYIFDLSAQY 254
Query: 106 SSGETGGN--PLIA----HLSRHKGPVRG--LEFNSFT-PNLLASGADDGEICIWDLSAP 156
+ +T G P + H R G V G L+++ L SG G I + + +
Sbjct: 255 KAFDTPGYMIPKSSKRPIHTIRAHGNVEGYGLDWSPLVNTGALLSGDMSGRIYLTNRTTS 314
Query: 157 AEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDL--KKQKPVISFSE 214
+ + P A+Q I + W++ + A+ +G +WD KK KP +S
Sbjct: 315 SWTTDKTPF----FASQSSIEDIQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVIA 370
Query: 215 SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN-------TMSPVKEFVGHTKGV 267
S K +V+ W+ + L+ + +D S + WD+RN SPV + H +
Sbjct: 371 S-KSDVNVISWSSKI-NHLLASGHDDGSWGV--WDLRNFTNNTTSNPSPVANYDFHKSPI 426
Query: 268 IAMSWCPNDSSYLLTCAKDNRTICWD 293
++S+ P D S + ++DN WD
Sbjct: 427 TSISFNPLDESIIAVSSEDNTVTLWD 452
Score = 120 (47.3 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 25/106 (23%), Positives = 50/106 (47%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD 145
L+A G DGS +W+ + ++ + +P +A+ HK P+ + FN +++A ++D
Sbjct: 387 LLASGHDDGSWGVWDLRNFTNNTTSNPSP-VANYDFHKSPITSISFNPLDESIIAVSSED 445
Query: 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQG---EISFVSWNSKVQHI 188
+ +WDL+ A+ R ++ FV W V+ +
Sbjct: 446 NTVTLWDLAVEADDEEISQQRKEAQELHDIPPQLLFVHWQRDVKDV 491
Score = 57 (25.1 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 312 DIHWYPKIPGVISASSFDG 330
D+ W+P+IPG + ++ DG
Sbjct: 490 DVRWHPQIPGCLVSTGGDG 508
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 125 (49.1 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 50/211 (23%), Positives = 91/211 (43%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
HK +R F+ T N A+ +DDG + IWD E LRG+G+ ++ V W
Sbjct: 201 HKEAIREASFSP-TDNKFATCSDDGTVRIWDFLRCHEERI---LRGHGA----DVKCVDW 252
Query: 182 NSKVQHILASTSYNGTTVV--WDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDE 239
+ + ++ S S + + WD K + + + + K ++ N + L+ AS +
Sbjct: 253 HP-TKGLVVSGSKDSQQPIKFWDPKTGQSLATL-HAHKNTVMEVKLNLN-GNWLLTASRD 309
Query: 240 DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDT-VSGE 298
+L+D+RN ++ F GH K A++W P + D + W V E
Sbjct: 310 H---LCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKE 366
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFD 329
+ A + + W+P + ++ + S D
Sbjct: 367 VGGMEMAHEGMIWSLAWHP-LGHILCSGSND 396
Score = 101 (40.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 46/221 (20%), Positives = 94/221 (42%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H PVR + + S + + G + W + ++ + + A + E SF
Sbjct: 157 LQAHDSPVRAMTW-SHNDMWMLTADHGGYVKYWQ----SNMNNVKMFQAHKEAIR-EASF 210
Query: 179 VSWNSKVQHILASTSYNGTTVVWD-LKKQKPVISFSESIKRRCSVLQWNPDVATQLVVAS 237
++K A+ S +GT +WD L+ + I +C + W+P LVV+
Sbjct: 211 SPTDNK----FATCSDDGTVRIWDFLRCHEERILRGHGADVKC--VDWHPTKG--LVVSG 262
Query: 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297
+DS ++ WD + S + H V+ + N ++LLT ++D+ +D +
Sbjct: 263 SKDSQQPIKFWDPKTGQS-LATLHAHKNTVMEVKLNLN-GNWLLTASRDHLCKLFDIRNL 320
Query: 298 EIVSELPAGTNWNFD-IHWYPKIPGVISASSFDGKIGIYNI 337
+ ++ G + W+P G+ ++ DG + +++
Sbjct: 321 KEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 361
Score = 92 (37.4 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 55/203 (27%), Positives = 78/203 (38%)
Query: 367 ASFGFGGKLVSFHPKSSAGHTS--ENSQHAPV-----HGVDQSK-----YGMVDSSQQYY 414
AS G G L+ +P+ G EN AP H + + G++ Q
Sbjct: 762 ASQGIQGPLMGLNPRGMQGPPGPRENQGPAPQGLMIGHPPQEMRGPHPPSGLLGHGPQEM 821
Query: 415 QEPVQSPLHQSVP--GGTYGDNYQQPLGPY-SNGRGYGASAAYQPAPQPGLFIPP--QAT 469
+ P + Q P G G Q+ GP S G+ + P PQ G+ PP Q
Sbjct: 822 RGPQEMRGMQGPPPQGSMLGPP-QELRGPSGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQ 880
Query: 470 QPNFTAPAPA--PVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYP--VP 525
Q P P+ P+ Q P + P N E Q T L PG+ G +P
Sbjct: 881 QNPARGPHPSQGPIPFQQQKAPLLGDGPRAPFNQEG--QSTGPPPLIPGLGQQGAQGRIP 938
Query: 526 PVSDARGSLPSQIGAVPGPKMPN 548
P++ +G P++ G GP PN
Sbjct: 939 PLNPGQGPGPNK-GDTRGP--PN 958
Score = 82 (33.9 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 55/200 (27%), Positives = 71/200 (35%)
Query: 391 SQHAPVHGVDQ-SKYGMVDSSQQYYQEP---VQSPL-HQSVPGGTYGDNYQQPLGPYSNG 445
S P+ G S G + Q +Q+P Q PL Q P G G ++ P GP
Sbjct: 577 SSGTPLLGPQPFSGQGPISQIPQGFQQPHPSQQMPLVPQMGPPGPQGQ-FRAP-GPQGQ- 633
Query: 446 RGYGASAAYQPAPQPGLFIPPQATQ-PNFTAPAPAPVTSQPAMR-------PFIPSTPPV 497
G +Q P F+ PQ Q P P P + M+ P P PP
Sbjct: 634 MGPQGPPMHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPG 693
Query: 498 LRNAEQYQQPTLGSQLYPGVSNP-GYPVPPVSDAR-GSL-PSQIGAVPGPKMPNVVAPTP 554
+ + Q +G Q PG G PP S G P + GP P + P
Sbjct: 694 PQGSSG-PQGHMGPQGPPGPQGHIGPQGPPASQGHMGPQGPPGTQGMQGPPGPRGMQGPP 752
Query: 555 TPTGFMPMSGSGVVQRPGMG 574
P G S +Q P MG
Sbjct: 753 HPHGIQGGPASQGIQGPLMG 772
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 155 (59.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 60/239 (25%), Positives = 104/239 (43%)
Query: 102 LSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT-PNLLASGADDGEICIWDLSAPAEPS 160
L L + + G PL + H V ++++ L+ SG+ D + +WD P +
Sbjct: 87 LQLWDTAKATG-PLQVY-KEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWD---PTVGN 141
Query: 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ--KPVISFSESIKR 218
RG+ S I W+ + AS S + T +WD+K + VI ++
Sbjct: 142 SLCTFRGHESVIYSTI----WSPHIPGCFASASGDQTLRIWDVKTAGVRIVIPAHQTEIL 197
Query: 219 RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS 278
C ++N + LVV D S LR WD+RN PV E +GHT + + + P +S
Sbjct: 198 SCDWCKYNEN----LVVTGAVDCS--LRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHAS 251
Query: 279 YLLTCAKDNRTICWDTVSGE-IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336
L +C+ D W+ + ++ + T + + + P ++ S+D I IY+
Sbjct: 252 VLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTEVADCSWDETIKIYD 310
Score = 120 (47.3 bits), Expect = 0.00035, P = 0.00035
Identities = 47/203 (23%), Positives = 94/203 (46%)
Query: 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWN-SKVQHILASTSYN 195
++L + + DG + +WD +A A PL+ Q E+ V W+ ++ + ++ S S++
Sbjct: 76 HVLVTCSGDGSLQLWD-TAKATG----PLQVYKEHTQ-EVYSVDWSQTRGEQLVVSGSWD 129
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
T VWD + +F S + W+P + AS + + LR+WD++ +
Sbjct: 130 QTVKVWDPTVGNSLCTFRGHESVIYSTI-WSPHIPGCFASASGDQT---LRIWDVKT--A 183
Query: 256 PVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS-GEIVSELPAGTNWNFDI 313
V+ + H +++ WC + + ++T A D WD + + V EL T +
Sbjct: 184 GVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRV 243
Query: 314 HWYPKIPGVISASSFDGKIGIYN 336
+ P V+++ S+D + +N
Sbjct: 244 KFSPFHASVLASCSYDFTVRFWN 266
Score = 119 (46.9 bits), Expect = 0.00045, P = 0.00045
Identities = 28/115 (24%), Positives = 52/115 (45%)
Query: 225 WNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA 284
W+ D LV S + S L+LWD P++ + HT+ V ++ W L+
Sbjct: 70 WSEDNEHVLVTCSGDGS---LQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSG 126
Query: 285 KDNRTI-CWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
++T+ WD G + + + W P IPG +++S D + I++++
Sbjct: 127 SWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVK 181
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 31/128 (24%), Positives = 58/128 (45%)
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQK-PVISFSESIKRRCSVLQWNPDVATQLVVAS 237
V+W+ +H+L + S +G+ +WD K P+ + E + SV W+ QLVV+
Sbjct: 68 VTWSEDNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSV-DWSQTRGEQLVVSG 126
Query: 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297
D + +++WD + + F GH + + W P+ + + D WD +
Sbjct: 127 SWDQT--VKVWDP-TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTA 183
Query: 298 EIVSELPA 305
+ +PA
Sbjct: 184 GVRIVIPA 191
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 155 (59.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 60/239 (25%), Positives = 104/239 (43%)
Query: 102 LSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT-PNLLASGADDGEICIWDLSAPAEPS 160
L L + + G PL + H V ++++ L+ SG+ D + +WD P +
Sbjct: 87 LQLWDTAKATG-PLQVY-KEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWD---PTVGN 141
Query: 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ--KPVISFSESIKR 218
RG+ S I W+ + AS S + T +WD+K + VI ++
Sbjct: 142 SLCTFRGHESVIYSTI----WSPHIPGCFASASGDQTLRIWDVKTTGVRIVIPAHQTEIL 197
Query: 219 RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS 278
C ++N + LVV D S LR WD+RN PV E +GHT + + + P +S
Sbjct: 198 SCDWCKYNEN----LVVTGAVDCS--LRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHAS 251
Query: 279 YLLTCAKDNRTICWDTVSGE-IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336
L +C+ D W+ + ++ + T + + + P ++ S+D I IY+
Sbjct: 252 VLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCSWDETIKIYD 310
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 47/202 (23%), Positives = 92/202 (45%)
Query: 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWN-SKVQHILASTSYN 195
++L + + DG + +WD +A A PL+ Q E+ V W+ ++ + ++ S S++
Sbjct: 76 HVLVTCSGDGSLQLWD-TAKATG----PLQVYKEHTQ-EVYSVDWSQTRGEQLVVSGSWD 129
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
T VWD + +F S + W+P + AS + + LR+WD++ T
Sbjct: 130 QTVKVWDPTVGNSLCTFRGHESVIYSTI-WSPHIPGCFASASGDQT---LRIWDVKTTGV 185
Query: 256 PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS-GEIVSELPAGTNWNFDIH 314
+ H +++ WC + + ++T A D WD + + V EL T +
Sbjct: 186 RIV-IPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVK 244
Query: 315 WYPKIPGVISASSFDGKIGIYN 336
+ P V+++ S+D + +N
Sbjct: 245 FSPFHASVLASCSYDFTVRFWN 266
Score = 117 (46.2 bits), Expect = 0.00075, P = 0.00075
Identities = 31/128 (24%), Positives = 58/128 (45%)
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQK-PVISFSESIKRRCSVLQWNPDVATQLVVAS 237
V+W+ +H+L + S +G+ +WD K P+ + E + SV W+ QLVV+
Sbjct: 68 VTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSV-DWSQTRGEQLVVSG 126
Query: 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297
D + +++WD + + F GH + + W P+ + + D WD +
Sbjct: 127 SWDQT--VKVWDP-TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTT 183
Query: 298 EIVSELPA 305
+ +PA
Sbjct: 184 GVRIVIPA 191
>UNIPROTKB|G4MXK2 [details] [associations]
symbol:MGG_01236 "WD repeat-containing protein slp1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001232 KO:K03363 RefSeq:XP_003714140.1
ProteinModelPortal:G4MXK2 EnsemblFungi:MGG_01236T0 GeneID:2679415
KEGG:mgr:MGG_01236 Uniprot:G4MXK2
Length = 593
Score = 160 (61.4 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 49/199 (24%), Positives = 90/199 (45%)
Query: 142 GADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVW 201
G GE+ IWD+ AE + + G+ + +S + WN +H+L++ + +G
Sbjct: 341 GMGTGEVQIWDV---AEGAKVRSMHGHDT----RVSVMGWN---KHLLSTGARSGLVFNH 390
Query: 202 DLK-KQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF 260
D++ + V C L+W D A QL +++ + +WD R+ P
Sbjct: 391 DVRIAEHKVAELVSHTSEVCG-LEWRSDGA-QLATGGNDN---LVSIWDARSLAVPKFTK 445
Query: 261 VGHTKGVIAMSWCPNDSSYLLTC--AKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPK 318
H V A++WCP + + L T + D W++ SG V+ + G+ + W P
Sbjct: 446 TNHKAAVKALAWCPWNMNLLATGGGSYDRHIHFWNSTSGARVNSIDTGSQVT-SLRWSPH 504
Query: 319 IPGVISASSF-DGKIGIYN 336
++S+S F D + I++
Sbjct: 505 YREIVSSSGFPDNSLSIWS 523
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 155 (59.6 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 59/239 (24%), Positives = 104/239 (43%)
Query: 102 LSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT-PNLLASGADDGEICIWDLSAPAEPS 160
L L + + G PL + H V ++++ L+ SG+ D + +WD P
Sbjct: 92 LQLWDTAKAAG-PLQVY-KEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD---PTVGK 146
Query: 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ--KPVISFSESIKR 218
RG+ S I W+ + AS S + T +WD+K + VI ++
Sbjct: 147 SLCTFRGHESIIYSTI----WSPHIPGCFASASGDQTLRIWDVKAAGVRIVIPAHQAEIL 202
Query: 219 RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS 278
C ++N + L+V D S LR WD+RN PV E +GHT + + + P +S
Sbjct: 203 SCDWCKYNEN----LLVTGAVDCS--LRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHAS 256
Query: 279 YLLTCAKDNRTICWD-TVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336
L +C+ D W+ + ++ + T + + + + P ++ S+D I IY+
Sbjct: 257 VLASCSYDFTVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 315
Score = 129 (50.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 48/203 (23%), Positives = 95/203 (46%)
Query: 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWN-SKVQHILASTSYN 195
++L + + DG + +WD + A P L+ AQ E+ V W+ ++ + ++ S S++
Sbjct: 81 HVLITCSGDGSLQLWDTAKAAGP-----LQVYKEHAQ-EVYSVDWSQTRGEQLVVSGSWD 134
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
T +WD K + +F S + W+P + AS + + LR+WD++ +
Sbjct: 135 QTVKLWDPTVGKSLCTFRGHESIIYSTI-WSPHIPGCFASASGDQT---LRIWDVK--AA 188
Query: 256 PVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS-GEIVSELPAGTNWNFDI 313
V+ + H +++ WC + + L+T A D WD + + V EL T +
Sbjct: 189 GVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRV 248
Query: 314 HWYPKIPGVISASSFDGKIGIYN 336
+ P V+++ S+D + +N
Sbjct: 249 KFSPFHASVLASCSYDFTVRFWN 271
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 33/128 (25%), Positives = 58/128 (45%)
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQK-PVISFSESIKRRCSVLQWNPDVATQLVVAS 237
V+W+ +H+L + S +G+ +WD K P+ + E + SV W+ QLVV+
Sbjct: 73 VTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSV-DWSQTRGEQLVVSG 131
Query: 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297
D + ++LWD S + F GH + + W P+ + + D WD +
Sbjct: 132 SWDQT--VKLWDPTVGKS-LCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAA 188
Query: 298 EIVSELPA 305
+ +PA
Sbjct: 189 GVRIVIPA 196
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 144 (55.7 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 48/219 (21%), Positives = 97/219 (44%)
Query: 94 GSIDIWN---PLSLISSGETG-------GNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA 143
G ++IW+ PL + + + P+ H+ ++++ +LA+G
Sbjct: 184 GRVNIWDLTQPLQAVENAQLAKQYEQSEARPVFT-FGGHQQEGFAIDWSPSADGVLATGD 242
Query: 144 DDGEICIWDLSAPAEPSHFP----PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTV 199
+I +W P E + PL G+ + + + W+ + +LAS S + T
Sbjct: 243 CRRDIHVW---TPVEDGTWKVDQRPLAGHSQSVED----LQWSPNERSVLASCSVDKTIR 295
Query: 200 VWDLKK--QKP-VISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS- 255
+WD + QK +++ ++ + +V+ WN + + +AS D L +WD+R S
Sbjct: 296 IWDCRASPQKACMLTCEDAHQSDVNVISWNRN---EPFIASGGDDG-YLHIWDLRQFQSK 351
Query: 256 -PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
P+ F HT + + W P +++ L + D++ WD
Sbjct: 352 KPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWD 390
Score = 60 (26.2 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 7/19 (36%), Positives = 16/19 (84%)
Query: 312 DIHWYPKIPGVISASSFDG 330
++HW+P++PGV+ +++ G
Sbjct: 429 ELHWHPQLPGVLLSTAHSG 447
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 157 (60.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 39/178 (21%), Positives = 78/178 (43%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H+ GL +N L S +DD IC+WD++A + + + +
Sbjct: 177 LRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVED 236
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVLQWNPDVATQLVV 235
V+W+ + + S + + ++WD + KP + ++ + L +NP ++ ++
Sbjct: 237 VAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV-DAHTAEVNCLSFNP--YSEFIL 293
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
A+ + + LWD+RN + F H + + W P++ + L + D R WD
Sbjct: 294 ATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 350
Score = 155 (59.6 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 55/202 (27%), Positives = 93/202 (46%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDL--SAPAEPSHFPPLRGNGSAAQGEISFV 179
H V + ++ +L S ADD ++ IWD + ++PSH A E++ +
Sbjct: 230 HTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSH------TVDAHTAEVNCL 283
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDE 239
S+N + ILA+ S + T +WDL+ K + ES K +QW+P T ++ +S
Sbjct: 284 SFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET-ILASSGT 342
Query: 240 DSSPALRLWDM------RNTMS-----PVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKD 286
D L +WD+ ++T P F+ GHT + SW PN+ + + ++D
Sbjct: 343 DRR--LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSED 400
Query: 287 NRTICW---DTVSGEIVSELPA 305
N W + V + E+PA
Sbjct: 401 NIMQVWQMAENVYNDEEPEIPA 422
Score = 139 (54.0 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 53/230 (23%), Positives = 97/230 (42%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF----PPLRGNGSAAQGEI 176
H+G V + ++A+ ++ ++D + P++P P LR G +G
Sbjct: 127 HEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGY- 185
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVATQL 233
+SWN + L S S + T +WD+ K+ VI +V++ DVA L
Sbjct: 186 -GLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVE---DVAWHL 241
Query: 234 VVASDEDS---SPALRLWDMRN--TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ S S L +WD RN T P HT V +S+ P L T + D
Sbjct: 242 LHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKT 301
Query: 289 TICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
WD + ++ + + + F + W P ++++S D ++ ++++
Sbjct: 302 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 351
>CGD|CAL0003029 [details] [associations]
symbol:CDC20 species:5476 "Candida albicans" [GO:0000089
"mitotic metaphase" evidence=IMP] [GO:0000093 "mitotic telophase"
evidence=IMP] [GO:0097027 "ubiquitin-protein ligase activator
activity" evidence=IEA] [GO:0010997 "anaphase-promoting complex
binding" evidence=IEA] [GO:0033597 "mitotic checkpoint complex"
evidence=IEA] [GO:0000778 "condensed nuclear chromosome
kinetochore" evidence=IEA] [GO:0005816 "spindle pole body"
evidence=IEA] [GO:0032153 "cell division site" evidence=IEA]
[GO:0005680 "anaphase-promoting complex" evidence=IEA] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=IEA] [GO:0051487
"activation of anaphase-promoting complex activity involved in
meiotic cell cycle" evidence=IEA] [GO:0007133 "meiotic anaphase I"
evidence=IEA] [GO:0033314 "mitotic DNA replication checkpoint"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0007092 "activation of mitotic anaphase-promoting
complex activity" evidence=IEA] [GO:0008054 "cyclin catabolic
process" evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003029 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000089 KO:K03363
EMBL:AACQ01000106 GO:GO:0000093 RefSeq:XP_714328.1
ProteinModelPortal:Q59XN4 STRING:Q59XN4 GeneID:3644057
KEGG:cal:CaO19.122 Uniprot:Q59XN4
Length = 699
Score = 160 (61.4 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 74/279 (26%), Positives = 121/279 (43%)
Query: 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142
S L+A GL D ++ +WN S+G G L+ L+ K V L ++ + ++ G
Sbjct: 350 STNLLAIGLED-AVYVWNA----STGSVG---LLCELA-DKTLVTSLRWSQ-DGSYISIG 399
Query: 143 ADDGEICIWDLSAPAEPSHFPPLRG-NGSAAQGEISFVSWNSKVQHILASTSYNGTTVVW 201
DDG I IWD+ + + LR N I+ SWN QH+L S S G
Sbjct: 400 KDDGLIEIWDIESNTK------LRTLNCDNHLTRIASQSWN---QHVLTSGSRMGHIYFS 450
Query: 202 DLKKQKPVISFSESIKRR--CSVLQWNPDVATQLVVASDEDS--------SPALRLWDMR 251
D++ +++ ++ C + ++ P S DS + +WD R
Sbjct: 451 DVRVANHLVNKNQEAHSAEVCGI-EYRPVGNGTSSTTSINDSLQFATGGNDNLVCIWDAR 509
Query: 252 NTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA-KDNRTI-CWDTVSGEIVSELPAGTNW 309
N +PV H V A+SWCP SS L T ++TI W+T +G V+ + G+
Sbjct: 510 NVTTPVFSKSNHKAAVKALSWCPYQSSLLATGGGSTDKTINFWNTTTGAKVNTIETGSQI 569
Query: 310 NFDIHW-YPKIPG--VISASSF-DGKIGIYNIEGCSRYG 344
+ ++W Y G +++ F I ++N + G
Sbjct: 570 S-SLNWGYAHGTGLEIVATHGFPSNSISLFNYPTLQKTG 607
>UNIPROTKB|Q59XN4 [details] [associations]
symbol:CDC20 "Potential activator of anaphase promoting
complex" species:237561 "Candida albicans SC5314" [GO:0000089
"mitotic metaphase" evidence=IMP] [GO:0000093 "mitotic telophase"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003029 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000089 KO:K03363
EMBL:AACQ01000106 GO:GO:0000093 RefSeq:XP_714328.1
ProteinModelPortal:Q59XN4 STRING:Q59XN4 GeneID:3644057
KEGG:cal:CaO19.122 Uniprot:Q59XN4
Length = 699
Score = 160 (61.4 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 74/279 (26%), Positives = 121/279 (43%)
Query: 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142
S L+A GL D ++ +WN S+G G L+ L+ K V L ++ + ++ G
Sbjct: 350 STNLLAIGLED-AVYVWNA----STGSVG---LLCELA-DKTLVTSLRWSQ-DGSYISIG 399
Query: 143 ADDGEICIWDLSAPAEPSHFPPLRG-NGSAAQGEISFVSWNSKVQHILASTSYNGTTVVW 201
DDG I IWD+ + + LR N I+ SWN QH+L S S G
Sbjct: 400 KDDGLIEIWDIESNTK------LRTLNCDNHLTRIASQSWN---QHVLTSGSRMGHIYFS 450
Query: 202 DLKKQKPVISFSESIKRR--CSVLQWNPDVATQLVVASDEDS--------SPALRLWDMR 251
D++ +++ ++ C + ++ P S DS + +WD R
Sbjct: 451 DVRVANHLVNKNQEAHSAEVCGI-EYRPVGNGTSSTTSINDSLQFATGGNDNLVCIWDAR 509
Query: 252 NTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA-KDNRTI-CWDTVSGEIVSELPAGTNW 309
N +PV H V A+SWCP SS L T ++TI W+T +G V+ + G+
Sbjct: 510 NVTTPVFSKSNHKAAVKALSWCPYQSSLLATGGGSTDKTINFWNTTTGAKVNTIETGSQI 569
Query: 310 NFDIHW-YPKIPG--VISASSF-DGKIGIYNIEGCSRYG 344
+ ++W Y G +++ F I ++N + G
Sbjct: 570 S-SLNWGYAHGTGLEIVATHGFPSNSISLFNYPTLQKTG 607
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 158 (60.7 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 75/269 (27%), Positives = 109/269 (40%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIA-HLSRHKGP--VRGLEFNSFTPN----L 138
L+A G D + IWN L+ S+G G L+ H R G + S N L
Sbjct: 196 LLASGSGDSTARIWN-LNENSNG--GSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTL 252
Query: 139 LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198
LA+G+ DG IW E + G +G I + WN K +IL S + TT
Sbjct: 253 LATGSYDGFARIW-----TEDGNLASTLGQH---KGPIFALKWNKKGNYIL-SAGVDKTT 303
Query: 199 VVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVK 258
++WD + F V W + T S + RL R PVK
Sbjct: 304 IIWDAHTGEAKQQFPFHSAPALDV-DWQNN--TTFASCSTDMCIHVCRLGCDR----PVK 356
Query: 259 EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWDTVSGEIVSELPAGTNWNFDIHWYP 317
F GHT V A+ W P S LL D+ T+ W V +L A + + I W P
Sbjct: 357 TFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 414
Query: 318 KIPG--------VISASSFDGKIGIYNIE 338
P +++++SFD + ++++E
Sbjct: 415 TGPATSNPNSNIMLASASFDSTVRLWDVE 443
Score = 130 (50.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 41/169 (24%), Positives = 81/169 (47%)
Query: 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPD-VATQ- 232
E++ + W+ +LAS S + T +W +K Q + ++ + ++W+P AT
Sbjct: 364 EVNAIKWDPSGM-LLASCSDDMTLKIWSMK-QDACVHDLQAHSKEIYTIKWSPTGPATSN 421
Query: 233 ----LVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+++AS S +RLWD+ + + H + V ++++ P D YL + + D
Sbjct: 422 PNSNIMLASASFDS-TVRLWDVERGVC-IHTLTKHQEPVYSVAFSP-DGKYLASGSFDKC 478
Query: 289 TICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
W+T SG +V GT F++ W + + AS+ DG + + ++
Sbjct: 479 VHIWNTQSGSLVHSY-RGTGGIFEVCWNAR-GDKVGASASDGSVCVLDL 525
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 54/203 (26%), Positives = 87/203 (42%)
Query: 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS 211
D+ P PS LRG+ S E+ +WN V +LAS S + T +W+L + S
Sbjct: 167 DVEIP--PSKATVLRGHES----EVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGS 219
Query: 212 FSESIKRRCSVLQWNPDVATQLVVAS-DEDSSPAL----------RLWDMRNTMSPVKEF 260
++ + R C + + DV + V S D +S L R+W ++
Sbjct: 220 -TQLVLRHC-IREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLAST--- 274
Query: 261 VGHTKG-VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKI 319
+G KG + A+ W +Y+L+ D TI WD +GE + P + D+ W
Sbjct: 275 LGQHKGPIFALKW-NKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNT 333
Query: 320 PGVISASSFDGKIGIYNIEGCSR 342
++ S D I + + GC R
Sbjct: 334 --TFASCSTDMCIHVCRL-GCDR 353
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 158 (60.7 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 75/269 (27%), Positives = 109/269 (40%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIA-HLSRHKGP--VRGLEFNSFTPN----L 138
L+A G D + IWN L+ S+G G L+ H R G + S N L
Sbjct: 196 LLASGSGDSTARIWN-LNENSNG--GSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTL 252
Query: 139 LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198
LA+G+ DG IW E + G +G I + WN K +IL S + TT
Sbjct: 253 LATGSYDGFARIW-----TEDGNLASTLGQH---KGPIFALKWNKKGNYIL-SAGVDKTT 303
Query: 199 VVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVK 258
++WD + F V W + T S + RL R PVK
Sbjct: 304 IIWDAHTGEAKQQFPFHSAPALDV-DWQNN--TTFASCSTDMCIHVCRLGCDR----PVK 356
Query: 259 EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWDTVSGEIVSELPAGTNWNFDIHWYP 317
F GHT V A+ W P S LL D+ T+ W V +L A + + I W P
Sbjct: 357 TFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 414
Query: 318 KIPG--------VISASSFDGKIGIYNIE 338
P +++++SFD + ++++E
Sbjct: 415 TGPATSNPNSNIMLASASFDSTVRLWDVE 443
Score = 130 (50.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 41/169 (24%), Positives = 81/169 (47%)
Query: 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPD-VATQ- 232
E++ + W+ +LAS S + T +W +K Q + ++ + ++W+P AT
Sbjct: 364 EVNAIKWDPSGM-LLASCSDDMTLKIWSMK-QDACVHDLQAHSKEIYTIKWSPTGPATSN 421
Query: 233 ----LVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+++AS S +RLWD+ + + H + V ++++ P D YL + + D
Sbjct: 422 PNSNIMLASASFDS-TVRLWDVERGVC-IHTLTKHQEPVYSVAFSP-DGKYLASGSFDKC 478
Query: 289 TICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
W+T SG +V GT F++ W + + AS+ DG + + ++
Sbjct: 479 VHIWNTQSGSLVHSY-RGTGGIFEVCWNAR-GDKVGASASDGSVCVLDL 525
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 54/203 (26%), Positives = 87/203 (42%)
Query: 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS 211
D+ P PS LRG+ S E+ +WN V +LAS S + T +W+L + S
Sbjct: 167 DVEIP--PSKATVLRGHES----EVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGS 219
Query: 212 FSESIKRRCSVLQWNPDVATQLVVAS-DEDSSPAL----------RLWDMRNTMSPVKEF 260
++ + R C + + DV + V S D +S L R+W ++
Sbjct: 220 -TQLVLRHC-IREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLAST--- 274
Query: 261 VGHTKG-VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKI 319
+G KG + A+ W +Y+L+ D TI WD +GE + P + D+ W
Sbjct: 275 LGQHKGPIFALKW-NKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNT 333
Query: 320 PGVISASSFDGKIGIYNIEGCSR 342
++ S D I + + GC R
Sbjct: 334 --TFASCSTDMCIHVCRL-GCDR 353
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 158 (60.7 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 75/269 (27%), Positives = 109/269 (40%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIA-HLSRHKGP--VRGLEFNSFTPN----L 138
L+A G D + IWN L+ S+G G L+ H R G + S N L
Sbjct: 197 LLASGSGDSTARIWN-LNENSNG--GSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTL 253
Query: 139 LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198
LA+G+ DG IW E + G +G I + WN K +IL S + TT
Sbjct: 254 LATGSYDGFARIW-----TEDGNLASTLGQH---KGPIFALKWNKKGNYIL-SAGVDKTT 304
Query: 199 VVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVK 258
++WD + F V W + T S + RL R PVK
Sbjct: 305 IIWDAHTGEAKQQFPFHSAPALDV-DWQNN--TTFASCSTDMCIHVCRLGCDR----PVK 357
Query: 259 EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWDTVSGEIVSELPAGTNWNFDIHWYP 317
F GHT V A+ W P S LL D+ T+ W V +L A + + I W P
Sbjct: 358 TFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSP 415
Query: 318 KIPG--------VISASSFDGKIGIYNIE 338
P +++++SFD + ++++E
Sbjct: 416 TGPATSNPNSSIMLASASFDSTVRLWDVE 444
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 41/169 (24%), Positives = 81/169 (47%)
Query: 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPD-VATQ- 232
E++ + W+ +LAS S + T +W +K Q + ++ + ++W+P AT
Sbjct: 365 EVNAIKWDPSGM-LLASCSDDMTLKIWSMK-QDTCVHDLQAHSKEIYTIKWSPTGPATSN 422
Query: 233 ----LVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+++AS S +RLWD+ + + H + V ++++ P D YL + + D
Sbjct: 423 PNSSIMLASASFDS-TVRLWDVERGVC-LHTLTKHQEPVYSVAFSP-DGKYLASGSFDKC 479
Query: 289 TICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
W+T SG +V GT F++ W + + AS+ DG + + ++
Sbjct: 480 VHIWNTQSGSLVHSY-RGTGGIFEVCWNAR-GDKVGASASDGSVCVLDL 526
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 54/203 (26%), Positives = 87/203 (42%)
Query: 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS 211
D+ P PS LRG+ S E+ +WN V +LAS S + T +W+L + S
Sbjct: 168 DVEIP--PSKATVLRGHES----EVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGS 220
Query: 212 FSESIKRRCSVLQWNPDVATQLVVAS-DEDSSPAL----------RLWDMRNTMSPVKEF 260
++ + R C + + DV + V S D +S L R+W ++
Sbjct: 221 -TQLVLRHC-IREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLAST--- 275
Query: 261 VGHTKG-VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKI 319
+G KG + A+ W +Y+L+ D TI WD +GE + P + D+ W
Sbjct: 276 LGQHKGPIFALKW-NKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNT 334
Query: 320 PGVISASSFDGKIGIYNIEGCSR 342
++ S D I + + GC R
Sbjct: 335 --TFASCSTDMCIHVCRL-GCDR 354
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 56/196 (28%), Positives = 84/196 (42%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H V + F+ T LASG+ D + WDLS E HF +G+ + +
Sbjct: 61 LEGHSEAVISVAFSP-TGKYLASGSGDTTVRFWDLST--ETPHFT-CQGH----RHWVLS 112
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT---QLVV 235
+SW+ + LAS NG ++WD K V + + L W P A + +
Sbjct: 113 ISWSPDGK-TLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMA 171
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWD 293
+S +D S +R+WD T + + GHT+ V + W D LL A +RTI W
Sbjct: 172 SSSKDGS--VRVWD--TTAGRCERILTGHTQSVTCLRW-GGDG--LLYSASQDRTIKVWR 224
Query: 294 TVSGEIVSELPAGTNW 309
G + L +W
Sbjct: 225 AHDGVLCRTLQGHGHW 240
Score = 127 (49.8 bits), Expect = 6.6e-08, Sum P(3) = 6.6e-08
Identities = 44/157 (28%), Positives = 73/157 (46%)
Query: 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195
P L SG+DD + +W +PAE P R G Q I+ V + S I+AS S++
Sbjct: 292 PERLVSGSDDFTLFMW---SPAEDKK-PLARMTGH--QALINQVLF-SPDSRIIASASFD 344
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
+ +WD + K + S + + W+ D ++L+V+ DS+ L++WD++
Sbjct: 345 KSIKLWDGRTGKYLASLRGHVAAVYQIA-WSAD--SRLLVSGSSDST--LKVWDVK-AQK 398
Query: 256 PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
+ GH V A+ W P D + + KD W
Sbjct: 399 LAADLPGHADEVYAVDWSP-DGQRVASGGKDKCLRIW 434
Score = 105 (42.0 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 29/129 (22%), Positives = 62/129 (48%)
Query: 189 LASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLW 248
L S S + T +W + K ++ + + + ++PD ++++ ++ D S ++LW
Sbjct: 295 LVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPD--SRIIASASFDKS--IKLW 350
Query: 249 DMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTN 308
D R T + GH V ++W DS L++ + D+ WD + ++ ++LP +
Sbjct: 351 DGR-TGKYLASLRGHVAAVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQKLAADLPGHAD 408
Query: 309 WNFDIHWYP 317
+ + W P
Sbjct: 409 EVYAVDWSP 417
Score = 71 (30.1 bits), Expect = 6.6e-08, Sum P(3) = 6.6e-08
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN----LLASG 142
+A G +G I +W+P S+G+ G L H S+ + GL + N +AS
Sbjct: 122 LASGCKNGQILLWDP----STGKQVGRVLAGH-SKW---ITGLSWEPLHANPECRYMASS 173
Query: 143 ADDGEICIWDLSA 155
+ DG + +WD +A
Sbjct: 174 SKDGSVRVWDTTA 186
Score = 45 (20.9 bits), Expect = 6.6e-08, Sum P(3) = 6.6e-08
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 12 SVAFAPDAPYMAAGT 26
SVAF+P Y+A+G+
Sbjct: 70 SVAFSPTGKYLASGS 84
Score = 37 (18.1 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 12 SVAFAPDAPYMAAGTMAGAV 31
S++++PD +A+G G +
Sbjct: 112 SISWSPDGKTLASGCKNGQI 131
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 158 (60.7 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 60/236 (25%), Positives = 109/236 (46%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H GPV F + + LL S ++D I WDL + F N QG ++
Sbjct: 334 LRGHCGPVYSTRFLADSSGLL-SCSEDMSIRYWDLGS------FT----NTVLYQGH-AY 381
Query: 179 VSWNSKVQ-HIL--ASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVV 235
W+ + H L AS S++ T +W + P+ ++ + ++++P+ + L
Sbjct: 382 PVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLAD-VDCVKFHPN-SNYLAT 439
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295
S + + +RLW + S V+ F GH V+++++ PN YL + +D R WD
Sbjct: 440 GSTDKT---VRLWSTQQGNS-VRLFTGHRGPVLSLAFSPN-GKYLASAGEDQRLKLWDLA 494
Query: 296 SGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG--CSRYGVGDSN 349
SG + EL T+ + + P +++++S D + +++I CS G S+
Sbjct: 495 SGTLYKELRGHTDNITSLTFSPD-SSLVASASMDNSVRVWDIRSSHCSTPADGSSS 549
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 158 (60.7 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 61/236 (25%), Positives = 108/236 (45%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H GPV F + + LL S ++D I WDL + F N QG ++
Sbjct: 338 LRGHCGPVYSTRFLADSSGLL-SCSEDMSIRYWDLGS------FT----NTVLYQGH-AY 385
Query: 179 VSWN---SKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVV 235
W+ S AS S++ T +W + P+ ++ + ++++P+ + L
Sbjct: 386 PVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLAD-VDCVKFHPN-SNYLAT 443
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295
S + + +RLW + S V+ F GH V+++++ PN YL + +D R WD
Sbjct: 444 GSTDKT---VRLWSAQQGNS-VRLFTGHRGPVLSLAFSPN-GKYLASAGEDQRLKLWDLA 498
Query: 296 SGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG--CSRYGVGDSN 349
SG + EL T+ + + P G+I+++S D + +++I CS G S+
Sbjct: 499 SGTLYKELRGHTDNITSLTFSPD-SGLIASASMDNSVRVWDIRNTYCSAPADGSSS 553
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 158 (60.7 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 60/235 (25%), Positives = 107/235 (45%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H GPV F + + LL S ++D I WDL + F N QG ++
Sbjct: 338 LRGHCGPVYSTRFLADSSGLL-SCSEDMSIRYWDLGS------FT----NTVLYQGH-AY 385
Query: 179 VSWNSKVQHI---LASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVV 235
W+ + AS S++ T +W + P+ ++ + ++++P+ + L
Sbjct: 386 PVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLAD-VDCVKFHPN-SNYLAT 443
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295
S + + +RLW + S V+ F GH V+++S+ PN YL + +D R WD
Sbjct: 444 GSTDKT---VRLWSAQQGNS-VRLFTGHRGPVLSLSFSPN-GKYLASAGEDQRLKLWDLA 498
Query: 296 SGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG--CSRYGVGDS 348
SG + EL T+ + + P G+I+++S D + +++I C+ G S
Sbjct: 499 SGTLFKELRGHTDSITSLAFSPD-SGLIASASMDNSVRVWDIRSTCCNTPADGSS 552
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 139 (54.0 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 57/196 (29%), Positives = 84/196 (42%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H V + F+ T LASG+ D + WDLS E HF +G+ + +
Sbjct: 110 LEGHSEAVISVAFSP-TGKYLASGSGDTTVRFWDLST--ETPHFT-CKGH----RHWVLS 161
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT---QLVV 235
+SW+ + LAS NG ++WD K V + + L W P A + V
Sbjct: 162 ISWSPDGRK-LASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVA 220
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWD 293
+S +D S +R+WD T + + GHT+ V + W D LL A +RTI W
Sbjct: 221 SSSKDGS--VRIWD--TTAGRCERILTGHTQSVTCLRW-GGDG--LLYSASQDRTIKVWR 273
Query: 294 TVSGEIVSELPAGTNW 309
G + L +W
Sbjct: 274 AHDGVLCRTLQGHGHW 289
Score = 127 (49.8 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 44/157 (28%), Positives = 73/157 (46%)
Query: 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195
P L SG+DD + +W +PAE P R G Q I+ V + S I+AS S++
Sbjct: 341 PERLVSGSDDFTLFLW---SPAEDKK-PLTRMTGH--QALINQVLF-SPDSRIVASASFD 393
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
+ +WD + K + S + + W+ D ++L+V+ DS+ L++WD++
Sbjct: 394 KSIKLWDGRTGKYLASLRGHVAAVYQIA-WSAD--SRLLVSGSSDST--LKVWDVK-AQK 447
Query: 256 PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
+ GH V A+ W P D + + KD W
Sbjct: 448 LAMDLPGHADEVYAVDWSP-DGQRVASGGKDKCLRIW 483
Score = 104 (41.7 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 30/129 (23%), Positives = 61/129 (47%)
Query: 189 LASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLW 248
L S S + T +W + K ++ + + + ++PD +++V ++ D S ++LW
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPD--SRIVASASFDKS--IKLW 399
Query: 249 DMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTN 308
D R T + GH V ++W DS L++ + D+ WD + ++ +LP +
Sbjct: 400 DGR-TGKYLASLRGHVAAVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHAD 457
Query: 309 WNFDIHWYP 317
+ + W P
Sbjct: 458 EVYAVDWSP 466
Score = 72 (30.4 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN----LLASG 142
+A G +G I +W+P S+G+ G L H S+ + GL + N +AS
Sbjct: 171 LASGCKNGQILLWDP----STGKQVGRTLAGH-SKW---ITGLSWEPLHANPECRYVASS 222
Query: 143 ADDGEICIWDLSA 155
+ DG + IWD +A
Sbjct: 223 SKDGSVRIWDTTA 235
Score = 45 (20.9 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 12 SVAFAPDAPYMAAGT 26
SVAF+P Y+A+G+
Sbjct: 119 SVAFSPTGKYLASGS 133
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 155 (59.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 44/191 (23%), Positives = 84/191 (43%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE NP + L H+ GL +NS L S +DD +C+WD++A + +
Sbjct: 163 SGEC--NPDL-RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAK 219
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSVL 223
+ + V+W+ + + S + + ++WD + KP ++ + L
Sbjct: 220 AVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPS-HLVDAHTAEVNCL 278
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVI-AMSWCPNDSSYLLT 282
+NP ++ ++A+ + + LWD+RN + F H + + W P++ + L +
Sbjct: 279 SFNP--YSEFILATGS-ADKTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILAS 335
Query: 283 CAKDNRTICWD 293
D R WD
Sbjct: 336 SGTDRRLNVWD 346
Score = 151 (58.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 56/231 (24%), Positives = 101/231 (43%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHF----PPLRGNGSAAQGEI 176
H+G V + P+++A+ + ++D + PA+P P LR G +G
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY- 180
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVATQL 233
+SWNS + L S S + T +WD+ K+ ++ +V++ DVA L
Sbjct: 181 -GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVE---DVAWHL 236
Query: 234 VVASDEDS---SPALRLWDMR-NTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+ S S L +WD R NT S V HT V +S+ P L T + D
Sbjct: 237 LHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 289 TICWDTVSGEI-VSELPAGTNWNFDI-HWYPKIPGVISASSFDGKIGIYNI 337
WD + ++ + + + F + HW P ++++S D ++ ++++
Sbjct: 297 VALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDL 347
Score = 151 (58.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 76/305 (24%), Positives = 131/305 (42%)
Query: 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSE-DRDLLLVGESPSSE 65
+NR+ + P P++ A + L F + + K D E + DL L G E
Sbjct: 126 VNRAR---YMPQNPHIIATKTPSSGVLVFDYTKHPA--KPDPSGECNPDLRLRGHQ--KE 178
Query: 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH--LSRHK 123
+ L+W N SG L++ D ++ +W+ I++G G + A + H
Sbjct: 179 GYG-LSWNSNLSGH------LLSAS-DDHTVCLWD----INAGPKEGKIVDAKAVFTGHS 226
Query: 124 GPVRGLEFNSFTPNLLASGADDGEICIWDL--SAPAEPSHFPPLRGNGSAAQGEISFVSW 181
V + ++ +L S ADD ++ +WD + ++PSH A E++ +S+
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLV------DAHTAEVNCLSF 280
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC-SVLQWNPDVATQLVVASDED 240
N + ILA+ S + T +WDL+ K + ES K V+ W+P T ++ +S D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNET-ILASSGTD 339
Query: 241 SSPALRLWDMRNTMS-----------PVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDN 287
L +WD+ P F+ GHT + SW PN+ + + ++DN
Sbjct: 340 RR--LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 397
Query: 288 RTICW 292
W
Sbjct: 398 IMQIW 402
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 156 (60.0 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 61/255 (23%), Positives = 113/255 (44%)
Query: 110 TGGNPLIAHLSRHKGPVRGLEFNSFTP-NLLASGADDGEICIWDLSAPAE-PSHFPPLRG 167
+ PL + L HK L+++ P L +G +DG I + + + RG
Sbjct: 243 SASKPL-STLRMHKSEGYALDWSPLHPLGKLLTGDNDGLIYVTTRTEGGGWVTDTRAFRG 301
Query: 168 NGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDL--KKQKPVISFSESIKRRCSVLQW 225
+ S+ + E+ W+ +++ AS S +GT VWD+ K + P ++ S +V+ W
Sbjct: 302 HASSVE-ELQ---WSPNEKNVFASASSDGTVKVWDVRSKSRSPAVNVKIS-NTDVNVMTW 356
Query: 226 NPDVATQLVVASDEDSSPALRLWDMRN-----------TMSPVKEFVGHTKGVIAMSWCP 274
+ + L +D D A+ WD+R+ T SPV F H + + ++ W P
Sbjct: 357 SKQTSHLLATGAD-DGQWAV--WDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHP 413
Query: 275 NDSSYLLTCAKDNRTICWDTV-------SGEI-VSELPAGTNW-NF-----DIHWYPKIP 320
D S + + DN WD S E ++++P + ++ ++HW ++P
Sbjct: 414 TDDSVIAVGSADNTVTLWDLAVELDEEESREAGLADVPPQLLFVHYMESVKEVHWQAQMP 473
Query: 321 GVISASSFDGKIGIY 335
G + A+ G G++
Sbjct: 474 GTLMATG-SGGFGVF 487
Score = 131 (51.2 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 49/202 (24%), Positives = 93/202 (46%)
Query: 62 PSSER-FNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS 120
PS+ + + L K+ + D+S G L+ G D + + + E GG
Sbjct: 242 PSASKPLSTLRMHKSEGYALDWSPLHPLGKLLTGDND--GLIYVTTRTEGGGWVTDTRAF 299
Query: 121 R-HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
R H V L+++ N+ AS + DG + +WD+ + S P + N + +++ +
Sbjct: 300 RGHASSVEELQWSPNEKNVFASASSDGTVKVWDVRSK---SRSPAV--NVKISNTDVNVM 354
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESI-----------KRRCSVLQWNPD 228
+W+ + H+LA+ + +G VWDL+ KP S S I K + ++W+P
Sbjct: 355 TWSKQTSHLLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHPT 414
Query: 229 VATQLVVASDEDSSPALRLWDM 250
+ + V S +++ + LWD+
Sbjct: 415 DDSVIAVGSADNT---VTLWDL 433
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 159 (61.0 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 49/225 (21%), Positives = 111/225 (49%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H V L+ + +L +G +D ++ +W A +P+ L G+ S ++F +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLW---AIGKPNAILSLYGHSSGIDS-VTFDA- 69
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
S+V ++A+ + +GT +WDL++ K V + + + C + ++P + + D+
Sbjct: 70 -SEV--LVAAGAASGTIKLWDLEEAKIVRTLTGH-RSNCISVDFHP--FGEFFASGSLDT 123
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301
+ L++WD+R + + GHT+GV + + P D ++++ +DN WD +G++++
Sbjct: 124 N--LKIWDIRKK-GCIHTYKGHTRGVNVLRFTP-DGRWVVSGGEDNIVKVWDLTAGKLLT 179
Query: 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVG 346
E + + ++P +++ S D + +++E G G
Sbjct: 180 EFKSHEGQIQSLDFHPH-EFLLATGSADRTVKFWDLETFELIGSG 223
Score = 125 (49.1 bits), Expect = 0.00044, P = 0.00044
Identities = 55/216 (25%), Positives = 102/216 (47%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD 145
LV GG D +++W + G+ N +++ L H + + F++ + L+A+GA
Sbjct: 32 LVTGG-EDHKVNLW------AIGKP--NAILS-LYGHSSGIDSVTFDA-SEVLVAAGAAS 80
Query: 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK 205
G I +WDL E L G+ S + F + AS S + +WD++K
Sbjct: 81 GTIKLWDLE---EAKIVRTLTGHRSNCIS-VDFHPFGE----FFASGSLDTNLKIWDIRK 132
Query: 206 QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTK 265
K I + R +VL++ PD + VV+ ED+ +++WD+ + EF H
Sbjct: 133 -KGCIHTYKGHTRGVNVLRFTPD--GRWVVSGGEDN--IVKVWDL-TAGKLLTEFKSHEG 186
Query: 266 GVIAMSWCPNDSSYLLTCAKDNRTI-CWDTVSGEIV 300
+ ++ + P++ +LL +RT+ WD + E++
Sbjct: 187 QIQSLDFHPHE--FLLATGSADRTVKFWDLETFELI 220
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 157 (60.3 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 67/263 (25%), Positives = 117/263 (44%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD 145
L+A G DG IW +GE LI+ LS+HKGP+ L++N LL +G+ D
Sbjct: 338 LLATGSCDGQARIWT-----LNGE-----LISTLSKHKGPIFSLKWNKKGDYLL-TGSVD 386
Query: 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK 205
+WD+ A F G V W + V A++S + + + +
Sbjct: 387 RTAVVWDVKAEEWKQQF-------EFHSGPTLDVDWRNNVS--FATSSTDSMIYLCKIGE 437
Query: 206 QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTK 265
+P +F+ + + ++W+P T ++AS D S A ++W+++ + V + HTK
Sbjct: 438 TRPAKTFTGH-QGEVNCVKWDP---TGSLLASCSDDSTA-KIWNIKQSTF-VHDLREHTK 491
Query: 266 GVIAMSWCP-----NDSSYLLTCAK---DNRTICWDTVSGEIVSELPAGTNWNFDIHWYP 317
+ + W P N+ + LT A D+ WD G+++ + + + P
Sbjct: 492 EIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSP 551
Query: 318 KIPGVISASSFDGKIGIYNI-EG 339
I++ S D I I++I EG
Sbjct: 552 N-GEYIASGSLDKSIHIWSIKEG 573
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 155 (59.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 61/236 (25%), Positives = 107/236 (45%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H GPV F S + LL S ++D I WDL + F N QG ++
Sbjct: 338 LRGHCGPVYSTRFLSDSSGLL-SCSEDMSIRYWDLRS------FT----NTVLYQGH-AY 385
Query: 179 VSWN---SKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVV 235
W+ S AS S++ T +W + P+ ++ + ++++P+ + L
Sbjct: 386 PVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLD-VDCVKFHPN-SNYLAT 443
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295
S + + +RLW + S V+ F GH V+A+++ PN YL + +D R WD
Sbjct: 444 GSTDKT---VRLWSTQQGNS-VRLFTGHRGPVLALAFSPN-GKYLASAGEDQRLKLWDLA 498
Query: 296 SGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG--CSRYGVGDSN 349
SG + EL T+ + + P +I+++S D + +++I C+ G S+
Sbjct: 499 SGTLYKELRGHTDNITSLTFSPD-SSLIASASMDNSVRVWDIRNTYCNAPADGSSS 553
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 155 (59.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 75/269 (27%), Positives = 110/269 (40%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIA-HLSRHKG---PV-RGLEFNSFTPN--L 138
L+A G D + IWN L+ S+G G L+ H R G P + + + N L
Sbjct: 246 LLASGSGDSTARIWN-LNENSNG--GSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTL 302
Query: 139 LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198
LA+G+ DG IW E + G +G I + WN K +IL S + TT
Sbjct: 303 LATGSYDGFARIW-----TEDGNLASTLGQH---KGPIFALKWNRKGNYIL-SAGVDKTT 353
Query: 199 VVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVK 258
++WD + F V W + T S + RL R PVK
Sbjct: 354 IIWDAHTGEAKQQFPFHSAPALDV-DWQNN--TTFASCSTDMCIHVCRLGCDR----PVK 406
Query: 259 EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWDTVSGEIVSELPAGTNWNFDIHWYP 317
F GHT V A+ W P S LL D+ T+ W + +L A + I W P
Sbjct: 407 TFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSP 464
Query: 318 KIPG--------VISASSFDGKIGIYNIE 338
P +++++SFD + +++IE
Sbjct: 465 TGPATSNPNSNIMLASASFDSTVRLWDIE 493
Score = 129 (50.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 42/169 (24%), Positives = 81/169 (47%)
Query: 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPD-VATQ- 232
E++ + W+ +LAS S + T +W +K Q+ I ++ + ++W+P AT
Sbjct: 414 EVNAIKWDPSGM-LLASCSDDMTLKIWSMK-QEVCIHDLQAHNKEIYTIKWSPTGPATSN 471
Query: 233 ----LVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+++AS S +RLWD+ + H + V ++++ P D YL + + D
Sbjct: 472 PNSNIMLASASFDS-TVRLWDIERGVC-THTLTKHQEPVYSVAFSP-DGKYLASGSFDKC 528
Query: 289 TICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
W+T SG +V GT F++ W + + AS+ DG + + ++
Sbjct: 529 VHIWNTQSGNLVHSY-RGTGGIFEVCWNAR-GDKVGASASDGSVCVLDL 575
Score = 121 (47.7 bits), Expect = 0.00072, P = 0.00072
Identities = 64/250 (25%), Positives = 106/250 (42%)
Query: 106 SSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD-DGEICIWDLSAPAEPSHFPP 164
S+G + NP + V G E + + N A + DGE+ I P+ S
Sbjct: 179 SAGVSHQNPS----KNREATVNGEENRAHSVNNHAKPMEIDGEVEI-----PS--SKATV 227
Query: 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQ 224
LRG+ S E+ +WN V +LAS S + T +W+L + S ++ + R C + +
Sbjct: 228 LRGHES----EVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGS-TQLVLRHC-IRE 280
Query: 225 WNPDVATQLVVAS-DEDSSPAL----------RLWDMRNTMSPVKEFVGHTKG-VIAMSW 272
DV + V S D +++ L R+W ++ +G KG + A+ W
Sbjct: 281 GGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLAST---LGQHKGPIFALKW 337
Query: 273 CPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKI 332
+Y+L+ D TI WD +GE + P + D+ W ++ S D I
Sbjct: 338 -NRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNT--TFASCSTDMCI 394
Query: 333 GIYNIEGCSR 342
+ + GC R
Sbjct: 395 HVCRL-GCDR 403
Score = 48 (22.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 20/65 (30%), Positives = 28/65 (43%)
Query: 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISS--GETGGNPLIAHL 119
PS++ L W NG+ L+A G DG IW ++S G+ G P+ A
Sbjct: 286 PSNKDVTSLDWNTNGT--------LLATGSYDGFARIWTEDGNLASTLGQHKG-PIFALK 336
Query: 120 SRHKG 124
KG
Sbjct: 337 WNRKG 341
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 131 (51.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 47/173 (27%), Positives = 76/173 (43%)
Query: 150 IWDLSA--PAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK 207
IWD + ++PSH + A E++ +S+N + ILA+ S + T +WDL+ K
Sbjct: 2 IWDTRSNNTSKPSH------SVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 55
Query: 208 PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNT---MSPVKE----- 259
+ ES K +QW+P T ++ +S D L +WD+ SP
Sbjct: 56 LKLHSFESHKDEIFQVQWSPHNET-ILASSGTDRR--LNVWDLSKIGEEQSPEDAEDGPP 112
Query: 260 ---FV--GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT 307
F+ GHT + SW PN+ + + ++DN W E P G+
Sbjct: 113 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGS 165
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 51/202 (25%), Positives = 90/202 (44%)
Query: 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGT 197
L+ SG+ D + +WD P RG+ S I W+ + AS+S + T
Sbjct: 127 LVVSGSWDQTVKLWD---PTVGKSLCTFRGHESVIYSTI----WSPHIPGCFASSSGDQT 179
Query: 198 TVVWDLKKQ--KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
+WD+K + V+ ++ C ++N + LVV D S LR WD+RN
Sbjct: 180 LRIWDVKTTGVRIVVPAHQAEILSCDWCKYNEN----LVVTGAVDCS--LRGWDLRNVQQ 233
Query: 256 PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE-IVSELPAGTNWNFDIH 314
PV E +GHT + + + P +S L +C+ D W+ + ++ + T + +
Sbjct: 234 PVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGLD 293
Query: 315 WYPKIPGVISASSFDGKIGIYN 336
+ P ++ ++D I IY+
Sbjct: 294 LSLQSPTQVADCAWDETIKIYD 315
Score = 122 (48.0 bits), Expect = 0.00022, P = 0.00022
Identities = 48/203 (23%), Positives = 95/203 (46%)
Query: 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWN-SKVQHILASTSYN 195
++L + + DG + +WD +A A PL+ Q E+ V W+ ++ + ++ S S++
Sbjct: 81 HVLVTCSGDGSLQLWD-TARATG----PLQVFKEHTQ-EVYSVDWSQTRGEQLVVSGSWD 134
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
T +WD K + +F S + W+P + +S + + LR+WD++ T
Sbjct: 135 QTVKLWDPTVGKSLCTFRGHESVIYSTI-WSPHIPGCFASSSGDQT---LRIWDVKTT-- 188
Query: 256 PVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS-GEIVSELPAGTNWNFDI 313
V+ V H +++ WC + + ++T A D WD + + V EL T +
Sbjct: 189 GVRIVVPAHQAEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVQQPVFELLGHTYAIRRV 248
Query: 314 HWYPKIPGVISASSFDGKIGIYN 336
+ P V+++ S+D + +N
Sbjct: 249 KFSPFHASVLASCSYDFTVRFWN 271
Score = 121 (47.7 bits), Expect = 0.00028, P = 0.00028
Identities = 29/115 (25%), Positives = 53/115 (46%)
Query: 225 WNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA 284
W+ + LV S + S L+LWD P++ F HT+ V ++ W L+
Sbjct: 75 WSENNEHVLVTCSGDGS---LQLWDTARATGPLQVFKEHTQEVYSVDWSQTRGEQLVVSG 131
Query: 285 KDNRTI-CWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
++T+ WD G+ + + + W P IPG ++SS D + I++++
Sbjct: 132 SWDQTVKLWDPTVGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDVK 186
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 33/128 (25%), Positives = 58/128 (45%)
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQK-PVISFSESIKRRCSVLQWNPDVATQLVVAS 237
V+W+ +H+L + S +G+ +WD + P+ F E + SV W+ QLVV+
Sbjct: 73 VTWSENNEHVLVTCSGDGSLQLWDTARATGPLQVFKEHTQEVYSV-DWSQTRGEQLVVSG 131
Query: 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297
D + ++LWD S + F GH + + W P+ + + D WD +
Sbjct: 132 SWDQT--VKLWDPTVGKS-LCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDVKTT 188
Query: 298 EIVSELPA 305
+ +PA
Sbjct: 189 GVRIVVPA 196
>FB|FBgn0263510 [details] [associations]
symbol:nclb "no child left behind" species:7227 "Drosophila
melanogaster" [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0030723 "ovarian fusome
organization" evidence=IMP] [GO:0008584 "male gonad development"
evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IMP]
[GO:0036098 "male germ-line stem cell maintenance" evidence=IMP]
[GO:0036099 "female germ-line stem cell maintenance" evidence=IMP]
[GO:0010468 "regulation of gene expression" evidence=IMP]
[GO:0035327 "transcriptionally active chromatin" evidence=IDA]
[GO:0030707 "ovarian follicle cell development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE013599 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030707 eggNOG:COG2319
GO:GO:0008584 GO:GO:0007281 GO:GO:0010468 GO:GO:0031490
GO:GO:0030723 GeneTree:ENSGT00390000017324 KO:K14791 OMA:RGVAKET
RefSeq:NP_610623.1 UniGene:Dm.30901 ProteinModelPortal:A1Z8D0
SMR:A1Z8D0 STRING:A1Z8D0 PaxDb:A1Z8D0 PRIDE:A1Z8D0
EnsemblMetazoa:FBtr0088228 GeneID:36150 KEGG:dme:Dmel_CG6751
UCSC:CG6751-RA CTD:36150 FlyBase:FBgn0263510 InParanoid:A1Z8D0
OrthoDB:EOG4K98TT PhylomeDB:A1Z8D0 GenomeRNAi:36150 NextBio:797092
Bgee:A1Z8D0 GO:GO:0036098 Uniprot:A1Z8D0
Length = 459
Score = 153 (58.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 59/254 (23%), Positives = 114/254 (44%)
Query: 137 NLLASGADDGEICIWDLSAP--AEPSHFPPLRGNGSAAQGEISF--------VSWNSKVQ 186
N+ A G D I +WDL EP+ L GS Q + + +SWN+ +
Sbjct: 190 NMCAIGCMDPIITVWDLDIQDAIEPTF--KLGSKGSRKQNKEQYGHKDAVLDLSWNTNFE 247
Query: 187 HILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALR 246
HILAS S + T ++WD+ + +P + + + ++ L+++P A Q ++ D +R
Sbjct: 248 HILASGSVDQTVILWDMDEGQPHTTIT-AFGKQIQSLEFHPQEA-QSILTGCADGY--VR 303
Query: 247 LWDMR-----NTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS-GEIV 300
L+D R N+ S + G + V+ W P + Y + D D S G+++
Sbjct: 304 LFDCRDAEGVNSSSIEWKVDGEVEKVL---WHPTQTDYFIVGTNDGTLHYADKRSPGQLL 360
Query: 301 SELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKW 360
+ A + + + P +++++S +G + ++N +G V + F+ L+ +
Sbjct: 361 WSVKAHNEEISGVCFNNQKPNLLTSTSTEGTLKVWNFDGTEAKHVYEHEFNMGRLQCMRQ 420
Query: 361 YKRPAGASFGFGGK 374
+ FGG+
Sbjct: 421 CPEDP-YTLAFGGE 433
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 125 (49.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 50/211 (23%), Positives = 91/211 (43%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
HK +R F+ T N A+ +DDG + IWD E LRG+G+ ++ V W
Sbjct: 197 HKEAIREASFSP-TDNKFATCSDDGTVRIWDFLRCHEERI---LRGHGA----DVKCVDW 248
Query: 182 NSKVQHILASTSYNGTTVV--WDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDE 239
+ + ++ S S + + WD K + + + + K ++ N + L+ AS +
Sbjct: 249 HP-TKGLVVSGSKDSQQPIKFWDPKTGQSLATL-HAHKNTVMEVKLNLN-GNWLLTASRD 305
Query: 240 DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDT-VSGE 298
+L+D+RN ++ F GH K A++W P + D + W V E
Sbjct: 306 H---LCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKE 362
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFD 329
+ A + + W+P + ++ + S D
Sbjct: 363 VGGMEMAHEGMIWSLAWHP-LGHILCSGSND 392
Score = 101 (40.6 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 46/221 (20%), Positives = 94/221 (42%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H PVR + + S + + G + W + ++ + + A + E SF
Sbjct: 153 LQAHDSPVRAMTW-SHNDMWMLTADHGGYVKYWQ----SNMNNVKMFQAHKEAIR-EASF 206
Query: 179 VSWNSKVQHILASTSYNGTTVVWD-LKKQKPVISFSESIKRRCSVLQWNPDVATQLVVAS 237
++K A+ S +GT +WD L+ + I +C + W+P LVV+
Sbjct: 207 SPTDNK----FATCSDDGTVRIWDFLRCHEERILRGHGADVKC--VDWHPTKG--LVVSG 258
Query: 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297
+DS ++ WD + S + H V+ + N ++LLT ++D+ +D +
Sbjct: 259 SKDSQQPIKFWDPKTGQS-LATLHAHKNTVMEVKLNLN-GNWLLTASRDHLCKLFDIRNL 316
Query: 298 EIVSELPAGTNWNFD-IHWYPKIPGVISASSFDGKIGIYNI 337
+ ++ G + W+P G+ ++ DG + +++
Sbjct: 317 KEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 357
Score = 86 (35.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 54/202 (26%), Positives = 77/202 (38%)
Query: 368 SFGFGGKLVSFHPKSSAGHTS--ENSQHAPV-----HGVDQSK-----YGMVDSSQQYYQ 415
S G G L+ +P+ G EN AP H + + G++ Q +
Sbjct: 759 SQGIQGPLMGLNPRGMQGPPGPRENQGPAPQGIMIGHPPQEMRGPHPPSGLLGHGPQEMR 818
Query: 416 EPVQSPLHQSVP--GGTYGDNYQQPLGPY-SNGRGYGASAAYQPAPQPGLFIPP--QATQ 470
P + Q P G G Q+ GP S G+ + P PQ G+ PP Q Q
Sbjct: 819 GPQEMRGMQGPPPQGSMLGPP-QELRGPSGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQ 877
Query: 471 PNFTAPAPA--PVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYP--VPP 526
P P+ P+ Q P + P N E Q T L PG+ G +PP
Sbjct: 878 NPARGPHPSQGPIPFQQQKAPLLGDGPRAPFNQEG--QSTGPPPLIPGLGQQGAQGRIPP 935
Query: 527 VSDARGSLPSQIGAVPGPKMPN 548
++ +G P++ G GP PN
Sbjct: 936 LNPGQGPGPNK-GDSRGP--PN 954
Score = 75 (31.5 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 53/200 (26%), Positives = 69/200 (34%)
Query: 391 SQHAPVHGVDQ-SKYGMVDSSQQYYQEP---VQSPL-HQSVPGGTYGDNYQQPLGPYSNG 445
S P+ G S G + Q +Q+P Q PL Q P G G ++ P GP
Sbjct: 573 SSGTPLLGPQPFSGQGPMSQIPQGFQQPHPSQQMPLVAQMGPPGPQGQ-FRAP-GPQGQ- 629
Query: 446 RGYGASAAYQPAPQPGLFIPPQATQ-PNFTAPAPAPVTSQPAMR-------PFIPSTPPV 497
G +Q P F+ PQ Q P P P + M+ P P PP
Sbjct: 630 MGPQGPPLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPG 689
Query: 498 LRNAEQYQQPTLGSQLYPGVSN---PGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTP 554
+ + Q +G Q PG P P P P + GP P + P
Sbjct: 690 PQGSSG-PQGHMGPQGPPGPQGHIGPQGPPAPQGHMGPQGPPGTQGMQGPPGPRGMQGPP 748
Query: 555 TPTGFMPMSGSGVVQRPGMG 574
P G S +Q P MG
Sbjct: 749 HPHGIQGGPTSQGIQGPLMG 768
Score = 61 (26.5 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 44/166 (26%), Positives = 56/166 (33%)
Query: 419 QSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAPAP 478
Q P+ Q +P G + Q + + G ++ AP P + PQ P
Sbjct: 587 QGPMSQ-IPQGFQQPHPSQQMPLVAQMGPPGPQGQFR-APGPQGQMGPQG--PPLHQGGG 642
Query: 479 APVTSQPAMRPFIPSTPPV-LRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQ 537
P Q M P P PP L + P G Q +PG P P P S P
Sbjct: 643 GP---QGFMGPQGPQGPPQGLPRPQDMHGPQ-GMQRHPGPHGPLGPQGPPGPQGSSGPQG 698
Query: 538 IGAVPGPKMPNV-VAPT--PTPTGFM----PMSGSGVVQRPGMGSM 576
GP P + P P P G M P G+ PG M
Sbjct: 699 HMGPQGPPGPQGHIGPQGPPAPQGHMGPQGPPGTQGMQGPPGPRGM 744
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 132 (51.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 55/196 (28%), Positives = 83/196 (42%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H V + F+ T LASG+ D + WDLS E HF +G+ + +
Sbjct: 112 LEGHSEAVISVAFSP-TGKYLASGSGDTTVRFWDLST--ETPHFT-CKGH----RHWVLS 163
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNP---DVATQLVV 235
+SW+ + LAS NG ++WD V + + L W P + + V
Sbjct: 164 ISWSPDGKK-LASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVA 222
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWD 293
+S +D S +R+WD T + + GHT+ V + W D LL A +RTI W
Sbjct: 223 SSSKDGS--VRVWD--TTAGRCERILTGHTQSVTCLRW-GGDG--LLYSASQDRTIKVWR 275
Query: 294 TVSGEIVSELPAGTNW 309
G + L +W
Sbjct: 276 AHDGVLCRTLQGHGHW 291
Score = 127 (49.8 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 44/157 (28%), Positives = 73/157 (46%)
Query: 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195
P L SG+DD + +W +PAE P R G Q I+ V + S I+AS S++
Sbjct: 343 PERLVSGSDDFTLFLW---SPAEDKK-PLARMTGH--QALINQVLF-SPDSRIVASASFD 395
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
+ +WD + K + S + + W+ D ++L+V+ DS+ L++WD++
Sbjct: 396 KSIKLWDGRTGKYLASLRGHVAAVYQIA-WSAD--SRLLVSGSSDST--LKVWDVK-AQK 449
Query: 256 PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
+ GH V A+ W P D + + KD W
Sbjct: 450 LTTDLPGHADEVYAVDWSP-DGQRVASGGKDKCLRIW 485
Score = 106 (42.4 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 30/129 (23%), Positives = 62/129 (48%)
Query: 189 LASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLW 248
L S S + T +W + K ++ + + + ++PD +++V ++ D S ++LW
Sbjct: 346 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPD--SRIVASASFDKS--IKLW 401
Query: 249 DMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTN 308
D R T + GH V ++W DS L++ + D+ WD + ++ ++LP +
Sbjct: 402 DGR-TGKYLASLRGHVAAVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHAD 459
Query: 309 WNFDIHWYP 317
+ + W P
Sbjct: 460 EVYAVDWSP 468
Score = 68 (29.0 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN----LLASG 142
+A G +G I +W+P S+G G L H S+ + GL + N +AS
Sbjct: 173 LASGCKNGQILLWDP----STGTQVGRTLTGH-SKW---ITGLSWEPLHMNPECRYVASS 224
Query: 143 ADDGEICIWDLSA 155
+ DG + +WD +A
Sbjct: 225 SKDGSVRVWDTTA 237
Score = 45 (20.9 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 12 SVAFAPDAPYMAAGT 26
SVAF+P Y+A+G+
Sbjct: 121 SVAFSPTGKYLASGS 135
Score = 38 (18.4 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 26 TMAGAVDLSFSSSANLEIFKLDFQSED-RDLLLVGESPSSERFNRLAWGKNG----SGSE 80
TMA + D + + A E + ++D + L + +S R+N L G+ SGS+
Sbjct: 294 TMALSTDYALRTGA-FEPAEATVNAQDLQGSLKELKERASSRYN-LVRGQGPERLVSGSD 351
Query: 81 DFSLGL 86
DF+L L
Sbjct: 352 DFTLFL 357
Score = 38 (18.4 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 12 SVAFAPDAPYMAAGTMAGAVDLSFSSSANLEI 43
S++++PD +A+G G + L + S ++
Sbjct: 163 SISWSPDGKKLASGCKNGQI-LLWDPSTGTQV 193
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 151 (58.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 47/183 (25%), Positives = 79/183 (43%)
Query: 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPA----EPSHFPPLRGNGSAA 172
A L H GL +N P LA+GA+D IC+WD+ + E P+
Sbjct: 176 AVLKGHTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPI-AKYHRH 234
Query: 173 QGEISFVSWNSKVQHILASTSYNGTTVVWD--LKKQKPVISFSESIKRRCSVLQWNPDVA 230
++ V ++ + + +LAS S + T + D L ++ ++ + + + NP
Sbjct: 235 TDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINP-FN 293
Query: 231 TQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI 290
L+ + D + AL WD+RN + GH V + W P+D L + + D R
Sbjct: 294 DYLLATASADKTVAL--WDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVC 351
Query: 291 CWD 293
WD
Sbjct: 352 IWD 354
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 66/260 (25%), Positives = 107/260 (41%)
Query: 48 FQSEDRDLLLVGES-PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWN-PLSLI 105
F + D L GE+ P + A G + + G +A G D I +W+
Sbjct: 159 FDTTCHDALTTGEALPQAVLKGHTAEGFGLCWNPNLP-GNLATGAEDQVICLWDVQTQSF 217
Query: 106 SSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165
+S ET IA RH V ++F+ LLAS +DD + I D E +
Sbjct: 218 TSSETKVISPIAKYHRHTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVI 277
Query: 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQW 225
+ + A I+ V+ N ++LA+ S + T +WDL+ + E + L+W
Sbjct: 278 QAHSKA----INAVAINPFNDYLLATASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEW 333
Query: 226 NPDVATQLVVASDEDSSPALRLWDMRNTM-----------SPVKEFV--GHTKGVIAMSW 272
+P + ++AS + + +WD+ SP F+ GHT + SW
Sbjct: 334 SPH--DEPILASSS-TDRRVCIWDLEKIGEEQTPEDAEDGSPELLFMHGGHTNRISEFSW 390
Query: 273 CPNDSSYLLTCAKDNRTICW 292
CPN+ + + A DN W
Sbjct: 391 CPNERWVVGSLADDNILQIW 410
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 82/338 (24%), Positives = 135/338 (39%)
Query: 6 GINRSASVAFAPDAPYMA-AGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSS 64
G NR++S+ +AP M +G + + F+ + L + S DR++ L
Sbjct: 35 GKNRTSSL----EAPIMLLSGHPSAVYTMKFNPAGTL----IASGSHDREIFLWRVHGDC 86
Query: 65 ERFNRLAWGKNGSGSEDFSL--GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRH 122
+ F L KN ++ + D ++ W+ ETG I ++ H
Sbjct: 87 KNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDV-------ETGKQ--IKKMAEH 137
Query: 123 KGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWN 182
V P L+ SG+DDG +WD+ FP + +I+ VS++
Sbjct: 138 SSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPD--------KYQITAVSFS 189
Query: 183 SKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSS 242
I N V WDL+K + ++ E + + + +PD + L D
Sbjct: 190 DAADKIFTGGVDNDVKV-WDLRKGEATMTL-EGHQDTITGMSLSPDGSYLLTNGMDNK-- 245
Query: 243 PALRLWDMRNTMSP----VKEFVGHT----KGVIAMSWCPNDSSYLLTCAKDNRTICWDT 294
L +WDMR +P VK F GH K ++ SW P D + + + D WDT
Sbjct: 246 --LCVWDMR-PYAPQNRCVKIFEGHQHNFEKNLLKCSWSP-DGTKVTAGSSDRMVHIWDT 301
Query: 295 VSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKI 332
S + +LP T + ++P P +I + S D I
Sbjct: 302 TSRRTIYKLPGHTGSVNECVFHPTEP-IIGSCSSDKNI 338
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 152 (58.6 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 67/267 (25%), Positives = 104/267 (38%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGP--VRGLEFNSFTPN----LL 139
L+A G D + IWN +SG T ++ H R G + S N LL
Sbjct: 183 LLASGSGDSTARIWNLSENSTSGST--QLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL 240
Query: 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTV 199
A+G+ DG IW + + G +G I + WN K IL S + TT+
Sbjct: 241 ATGSYDGFARIW-----TKDGNLASTLGQH---KGPIFALKWNKKGNFIL-SAGVDKTTI 291
Query: 200 VWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE 259
+WD + F V W + S + +L R P+K
Sbjct: 292 IWDAHTGEAKQQFPFHSAPALDV-DWQSN--NTFASCSTDMCIHVCKLGQDR----PIKT 344
Query: 260 FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKI 319
F GHT V A+ W P + L +C+ D W V +L A + I W P
Sbjct: 345 FQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 320 PG--------VISASSFDGKIGIYNIE 338
PG +++++SFD + +++++
Sbjct: 404 PGTNNPNANLMLASASFDSTVRLWDVD 430
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 73/315 (23%), Positives = 139/315 (44%)
Query: 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDI 98
+N ++ LD+ SE LL G S + F R+ W K+G+ + +LG G + ++
Sbjct: 224 SNKDVTSLDWNSEGT-LLATG---SYDGFARI-WTKDGNLAS--TLGQHKGPIF--ALK- 273
Query: 99 WNPL-SLISSGETGGNPLI--AHLSR-------HKGPVRGLEFNSFTPNLLASGADDGEI 148
WN + I S +I AH H P +++ S N AS + D +
Sbjct: 274 WNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQS--NNTFASCSTD--M 329
Query: 149 CIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP 208
CI + + +G+ + E++ + W+ ++LAS S + T +W +K+
Sbjct: 330 CI-HVCKLGQDRPIKTFQGHTN----EVNAIKWDP-TGNLLASCSDDMTLKIWSMKQDNC 383
Query: 209 VISFSESIKRRCSVLQWNP------DVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG 262
V ++ + ++W+P + L++AS S +RLWD+ + +
Sbjct: 384 VHDL-QAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDS-TVRLWDVDRGIC-IHTLTK 440
Query: 263 HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGV 322
H + V ++++ P D YL + + D W+T +G +V GT F++ W
Sbjct: 441 HQEPVYSVAFSP-DGRYLASGSFDKCVHIWNTQTGALVHSY-RGTGGIFEVCWNAA-GDK 497
Query: 323 ISASSFDGKIGIYNI 337
+ AS+ DG + + ++
Sbjct: 498 VGASASDGSVCVLDL 512
Score = 120 (47.3 bits), Expect = 0.00079, P = 0.00079
Identities = 46/176 (26%), Positives = 77/176 (43%)
Query: 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS 211
D+ P P+ LRG+ S E+ +WN V +LAS S + T +W+L + S
Sbjct: 154 DVEIP--PNKAVVLRGHES----EVFICAWNP-VSDLLASGSGDSTARIWNLSENSTSGS 206
Query: 212 FSESIKRRCSVLQWNPDVATQLVVAS-DEDSSPAL----------RLWDMRNTMSPVKEF 260
++ + R C + + DV + V S D +S L R+W ++
Sbjct: 207 -TQLVLRHC-IREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLAST--- 261
Query: 261 VGHTKG-VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHW 315
+G KG + A+ W +++L+ D TI WD +GE + P + D+ W
Sbjct: 262 LGQHKGPIFALKW-NKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 316
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 152 (58.6 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 67/267 (25%), Positives = 104/267 (38%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGP--VRGLEFNSFTPN----LL 139
L+A G D + IWN +SG T ++ H R G + S N LL
Sbjct: 183 LLASGSGDSTARIWNLSENSTSGST--QLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL 240
Query: 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTV 199
A+G+ DG IW + + G +G I + WN K IL S + TT+
Sbjct: 241 ATGSYDGFARIW-----TKDGNLASTLGQH---KGPIFALKWNKKGNFIL-SAGVDKTTI 291
Query: 200 VWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE 259
+WD + F V W + S + +L R P+K
Sbjct: 292 IWDAHTGEAKQQFPFHSAPALDV-DWQSN--NTFASCSTDMCIHVCKLGQDR----PIKT 344
Query: 260 FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKI 319
F GHT V A+ W P + L +C+ D W V +L A + I W P
Sbjct: 345 FQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 320 PG--------VISASSFDGKIGIYNIE 338
PG +++++SFD + +++++
Sbjct: 404 PGTNNPNANLMLASASFDSTVRLWDVD 430
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 73/315 (23%), Positives = 139/315 (44%)
Query: 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDI 98
+N ++ LD+ SE LL G S + F R+ W K+G+ + +LG G + ++
Sbjct: 224 SNKDVTSLDWNSEGT-LLATG---SYDGFARI-WTKDGNLAS--TLGQHKGPIF--ALK- 273
Query: 99 WNPL-SLISSGETGGNPLI--AHLSR-------HKGPVRGLEFNSFTPNLLASGADDGEI 148
WN + I S +I AH H P +++ S N AS + D +
Sbjct: 274 WNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQS--NNTFASCSTD--M 329
Query: 149 CIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP 208
CI + + +G+ + E++ + W+ ++LAS S + T +W +K+
Sbjct: 330 CI-HVCKLGQDRPIKTFQGHTN----EVNAIKWDP-TGNLLASCSDDMTLKIWSMKQDNC 383
Query: 209 VISFSESIKRRCSVLQWNP------DVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG 262
V ++ + ++W+P + L++AS S +RLWD+ + +
Sbjct: 384 VHDL-QAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDS-TVRLWDVDRGIC-IHTLTK 440
Query: 263 HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGV 322
H + V ++++ P D YL + + D W+T +G +V GT F++ W
Sbjct: 441 HQEPVYSVAFSP-DGRYLASGSFDKCVHIWNTQTGALVHSY-RGTGGIFEVCWNAA-GDK 497
Query: 323 ISASSFDGKIGIYNI 337
+ AS+ DG + + ++
Sbjct: 498 VGASASDGSVCVLDL 512
Score = 120 (47.3 bits), Expect = 0.00079, P = 0.00079
Identities = 46/176 (26%), Positives = 77/176 (43%)
Query: 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS 211
D+ P P+ LRG+ S E+ +WN V +LAS S + T +W+L + S
Sbjct: 154 DVEIP--PNKAVVLRGHES----EVFICAWNP-VSDLLASGSGDSTARIWNLSENSTSGS 206
Query: 212 FSESIKRRCSVLQWNPDVATQLVVAS-DEDSSPAL----------RLWDMRNTMSPVKEF 260
++ + R C + + DV + V S D +S L R+W ++
Sbjct: 207 -TQLVLRHC-IREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLAST--- 261
Query: 261 VGHTKG-VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHW 315
+G KG + A+ W +++L+ D TI WD +GE + P + D+ W
Sbjct: 262 LGQHKGPIFALKW-NKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 316
>POMBASE|SPAC23C4.02 [details] [associations]
symbol:crn1 "actin binding protein, coronin Crn1"
species:4896 "Schizosaccharomyces pombe" [GO:0003779 "actin
binding" evidence=ISS] [GO:0005826 "actomyosin contractile ring"
evidence=IDA] [GO:0030036 "actin cytoskeleton organization"
evidence=ISS] [GO:0030041 "actin filament polymerization"
evidence=NAS] [GO:0030139 "endocytic vesicle" evidence=IDA]
[GO:0030479 "actin cortical patch" evidence=IDA] [GO:0035838
"growing cell tip" evidence=IDA] [GO:0043234 "protein complex"
evidence=NAS] [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0051017 "actin filament bundle assembly" evidence=NAS]
[GO:0051286 "cell tip" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC23C4.02 GO:GO:0003779
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030479 GO:GO:0051017 GO:GO:0030041 GO:GO:0030139
GO:GO:0005826 GO:GO:0035838 HOGENOM:HOG000166356 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 PIR:T38258 RefSeq:NP_593175.1
ProteinModelPortal:O13923 STRING:O13923 PRIDE:O13923
EnsemblFungi:SPAC23C4.02.1 GeneID:2541961 KEGG:spo:SPAC23C4.02
OMA:LQDRRIA OrthoDB:EOG4TJ02B NextBio:20803045 Uniprot:O13923
Length = 601
Score = 153 (58.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 52/170 (30%), Positives = 80/170 (47%)
Query: 102 LSLISSGETGGNPLIAHLSR-HKGPVRGLEFNSFTPNLLASGADDGEICIW----DLSA- 155
L++I E G P +L R H V ++N F +LASG DD +I IW D +
Sbjct: 59 LAVIPLNERGKLPDQVNLFRGHTAAVLDTDWNPFHDQVLASGGDDSKIMIWKVPEDYTVM 118
Query: 156 -PAEPSH-FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS 213
P E H L+G+ ++ V ++ ++LAS+S + T +WD +K +S
Sbjct: 119 EPYEDVHPIAELKGHSR----KVGLVQYHPTAANVLASSSADNTIKLWDCEKGVAHVSLK 174
Query: 214 ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGH 263
+ C + +N D T+LV S + +R+WD R T PV GH
Sbjct: 175 MDVM--CQSMSFNAD-GTRLVTTSRDKK---VRVWDPR-TDKPVSVGNGH 217
>RGD|1309751 [details] [associations]
symbol:Tfg "Trk-fused gene" species:10116 "Rattus norvegicus"
[GO:0004871 "signal transducer activity" evidence=IEA;ISO]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0042802
"identical protein binding" evidence=IEA;ISO] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO]
InterPro:IPR000270 Pfam:PF00564 SMART:SM00666 RGD:1309751
GO:GO:0043123 GO:GO:0004871 EMBL:CH473967 CTD:10342
HOGENOM:HOG000132915 HOVERGEN:HBG009087 KO:K09292 OMA:YTTQTSQ
OrthoDB:EOG40K80D GeneTree:ENSGT00510000047809 EMBL:BC078947
IPI:IPI00464776 RefSeq:NP_001012144.1 RefSeq:XP_003751088.1
UniGene:Rn.24822 STRING:Q6AYR1 Ensembl:ENSRNOT00000048417
GeneID:360709 KEGG:rno:360709 UCSC:RGD:1309751 InParanoid:Q6AYR1
NextBio:673825 Genevestigator:Q6AYR1 Uniprot:Q6AYR1
Length = 398
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 66/203 (32%), Positives = 84/203 (41%)
Query: 377 SFHPKSSAGHTSENSQHAPVHGVDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGTYGDNYQ 436
S SSA H + P + Q++ G ++ Q YQ+ +Q G Y + Q
Sbjct: 210 SIASSSSAAHPAAGQPQQPPYAGAQTQAGQIEG--QMYQQ------YQQQAG--Y--SAQ 257
Query: 437 QPLGPYSN-GRGYGASAAYQPAPQPGLFIPPQATQPNFTAPAPAPVTSQPAMRPFIPSTP 495
QP P G Y AS + Q PQ QP APAPA + QP +P+ P
Sbjct: 258 QPQAPPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPA-FSGQPQQ---LPAQP 313
Query: 496 PVLRNAEQYQQPTLGSQLYPG-VSNPG-YPVPPVSDARGSLPSQIGAVPGPKMPNVVAPT 553
P +QYQ T Q Y S P Y VPP S G PSQ GA P+ P P+
Sbjct: 314 P-----QQYQASTYPPQTYTTQTSQPANYTVPPGSQP-GMAPSQPGAYQ-PR-PGFT-PS 364
Query: 554 PTPTGFMPMSGSGVV--QRPGMG 574
P T P +G+ RP G
Sbjct: 365 PASTMAPPSTGANPYARNRPPFG 387
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 152 (58.6 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 74/269 (27%), Positives = 110/269 (40%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIA-HLSRHKG---PV-RGLEFNSFTPN--L 138
L+A G D + IWN L+ S+G G L+ H R G P + + + N L
Sbjct: 238 LLASGSGDSTARIWN-LNENSNG--GSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTL 294
Query: 139 LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198
LA+G+ DG IW E + G +G I + WN K +IL S + TT
Sbjct: 295 LATGSYDGFARIW-----TEDGNLASTLGQH---KGPIFALKWNRKGNYIL-SAGVDKTT 345
Query: 199 VVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVK 258
++WD + F V W ++ S + RL R PVK
Sbjct: 346 IIWDAHTGEAKQQFPFHSAPALDV-DWQNNMT--FASCSTDMCIHVCRLGCDR----PVK 398
Query: 259 EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWDTVSGEIVSELPAGTNWNFDIHWYP 317
F GHT V A+ W P S LL D+ T+ W + +L A + I W P
Sbjct: 399 TFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSP 456
Query: 318 KIPG--------VISASSFDGKIGIYNIE 338
P +++++SFD + +++IE
Sbjct: 457 TGPATSNPNSNIMLASASFDSTVRLWDIE 485
Score = 128 (50.1 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 42/169 (24%), Positives = 81/169 (47%)
Query: 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPD-VATQ- 232
E++ + W+ +LAS S + T +W +K Q+ I ++ + ++W+P AT
Sbjct: 406 EVNAIKWDPSGM-LLASCSDDMTLKIWSMK-QEVCIHDLQAHNKEIYTIKWSPTGPATSN 463
Query: 233 ----LVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+++AS S +RLWD+ + H + V ++++ P D YL + + D
Sbjct: 464 PNSNIMLASASFDS-TVRLWDIERGVC-THTLTKHQEPVYSVAFSP-DGRYLASGSFDKC 520
Query: 289 TICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
W+T SG +V GT F++ W + + AS+ DG + + ++
Sbjct: 521 VHIWNTQSGNLVHSY-RGTGGIFEVCWNAR-GDKVGASASDGSVCVLDL 567
Score = 122 (48.0 bits), Expect = 0.00055, P = 0.00055
Identities = 60/230 (26%), Positives = 100/230 (43%)
Query: 126 VRGLEFNSFTPNLLASGAD-DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK 184
V G E + + N A + DGE+ I P+ S LRG+ S E+ +WN
Sbjct: 187 VNGEENRAHSVNNHAKPMEIDGEVDI-----PS--SKATVLRGHES----EVFICAWNP- 234
Query: 185 VQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVAS-DEDSSP 243
V +LAS S + T +W+L + S ++ + R C + + DV + V S D +++
Sbjct: 235 VSDLLASGSGDSTARIWNLNENSNGGS-TQLVLRHC-IREGGHDVPSNKDVTSLDWNTNG 292
Query: 244 AL----------RLWDMRNTMSPVKEFVGHTKG-VIAMSWCPNDSSYLLTCAKDNRTICW 292
L R+W ++ +G KG + A+ W +Y+L+ D TI W
Sbjct: 293 TLLATGSYDGFARIWTEDGNLAST---LGQHKGPIFALKW-NRKGNYILSAGVDKTTIIW 348
Query: 293 DTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342
D +GE + P + D+ W + ++ S D I + + GC R
Sbjct: 349 DAHTGEAKQQFPFHSAPALDVDWQNNM--TFASCSTDMCIHVCRL-GCDR 395
Score = 48 (22.0 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 20/65 (30%), Positives = 28/65 (43%)
Query: 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISS--GETGGNPLIAHL 119
PS++ L W NG+ L+A G DG IW ++S G+ G P+ A
Sbjct: 278 PSNKDVTSLDWNTNGT--------LLATGSYDGFARIWTEDGNLASTLGQHKG-PIFALK 328
Query: 120 SRHKG 124
KG
Sbjct: 329 WNRKG 333
>UNIPROTKB|Q5AZD9 [details] [associations]
symbol:AN6341.2 "Coronin" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0005826 "actomyosin contractile ring"
evidence=ISS] [GO:0005885 "Arp2/3 protein complex" evidence=ISS]
[GO:0030479 "actin cortical patch" evidence=ISS] [GO:0034316
"negative regulation of Arp2/3 complex-mediated actin nucleation"
evidence=ISS] [GO:0051015 "actin filament binding" evidence=ISS]
[GO:0051666 "actin cortical patch localization" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051015 GO:GO:0030479 EMBL:AACD01000107 GO:GO:0005826
GO:GO:0051666 GO:GO:0034316 GO:GO:0005885 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OrthoDB:EOG4TJ02B RefSeq:XP_663945.1
ProteinModelPortal:Q5AZD9 STRING:Q5AZD9 GeneID:2871240
KEGG:ani:AN6341.2 Uniprot:Q5AZD9
Length = 595
Score = 152 (58.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 123/541 (22%), Positives = 208/541 (38%)
Query: 66 RFNRLAWGKN--GSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR-H 122
R +R AW N + + S+ AGG G+ + PL E G P L R H
Sbjct: 13 RVSRNAWDTNLVKANPKYLSVNWEAGG--GGAFAVI-PLE-----ERGKLPERIPLFRGH 64
Query: 123 KGPVRGLEFNSFTPNLLASGADDGEICIW------DLSAPAEPSHFPPLR--GNGSAAQG 174
V ++N F +L+ASG+DDG + +W LS + + G S
Sbjct: 65 TAVVLDTDWNPFNDDLIASGSDDGRVFLWRVPEGFTLSPDVDADDIQDVAPVGKLSGHPK 124
Query: 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKK--QKPVISFSESIKRRCSVLQWNPDVATQ 232
++ V +N ++ILA+ S + T +WD++ K ++ + ++ + W+ + +
Sbjct: 125 KVGHVLFNPAAENILATASGDYTVKIWDIEAGASKLTLNVGDIVQSQ----SWSANGS-- 178
Query: 233 LVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMS-WCPNDSSYLLT-CAK--DNR 288
L+V + D LR+WD+R P E GHT + S W + T +K D +
Sbjct: 179 LLVTTSRDKK--LRVWDVRQER-PAHEGQGHTGAKNSRSVWLGERDRFATTGFSKMSDRQ 235
Query: 289 TICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDS 348
WD S +LP D I GV DG +Y G GD
Sbjct: 236 LALWDIRS----PQLPIDGFKTLD-----SISGVCMPFWDDGTQCLYLA------GRGDG 280
Query: 349 NFSAAPLRAPKW-YKRPAGASFGFGGKLVSFHPKSSAG-HTSENSQ-HAPVHG--VDQSK 403
N L K+ Y ++ G ++F PK H +E ++ V+ ++
Sbjct: 281 NIRYFELENDKFEYLSEYKSADPQRG--IAFMPKRGVNMHENEVTRAFKTVNDTYIEPIS 338
Query: 404 YGMVDSSQQYYQEPVQSPLHQSVPGGT----YGDNYQQP----LGPYSNGRGYGASAAYQ 455
+ +V + +Q+ + P P + +G P +G +G+G Q
Sbjct: 339 F-IVPRRAETFQDDIYPPTVGLKPAMSASEWFGGKEAIPPKISMGSLYDGQGLKEVTGIQ 397
Query: 456 PAPQPGLFI---PPQATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQ 512
P L P ++P PAP T++ A P T PV++ A ++ G+
Sbjct: 398 DKPTSNLGTESKPEPKSEPE-AKPAPQVKTTESA-----PETTPVVKPAPSMKEQ--GAS 449
Query: 513 LYPGVSN--PGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVVQR 570
+ V+ P ++ PS+ + P +PT + F+ S +
Sbjct: 450 MAAMVNKFADDEEAEPAEESSFDEPSK-PIERATRSPGTSSPTVKDSPFLQKENSAKISS 508
Query: 571 P 571
P
Sbjct: 509 P 509
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 151 (58.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 67/269 (24%), Positives = 107/269 (39%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGP--VRGLEFNSFTPN----LL 139
L+A G D + IWN +SG T ++ H R G + S N LL
Sbjct: 183 LLASGSGDSTARIWNLSENSTSGST--QLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL 240
Query: 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTV 199
A+G+ DG IW + + G +G I + WN K IL S + TT+
Sbjct: 241 ATGSYDGFARIW-----TKDGNLASTLGQH---KGPIFALKWNKKGNFIL-SAGVDKTTI 291
Query: 200 VWDLK--KQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPV 257
+WD + K + F + + W + S + +L R P+
Sbjct: 292 IWDAHTGEAKQLFPFHSA---PALDVDWQSN--NTFASCSTDMCIHVCKLGQDR----PI 342
Query: 258 KEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYP 317
K F GHT V A+ W P + L +C+ D W V +L A + I W P
Sbjct: 343 KTFQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 318 KIPG--------VISASSFDGKIGIYNIE 338
PG +++++SFD + +++++
Sbjct: 402 TGPGTSNPNANLMLASASFDSTVRLWDVD 430
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 73/315 (23%), Positives = 139/315 (44%)
Query: 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDI 98
+N ++ LD+ SE LL G S + F R+ W K+G+ + +LG G + ++
Sbjct: 224 SNKDVTSLDWNSEGT-LLATG---SYDGFARI-WTKDGNLAS--TLGQHKGPIF--ALK- 273
Query: 99 WNPL-SLISSGETGGNPLI--AHLSR-------HKGPVRGLEFNSFTPNLLASGADDGEI 148
WN + I S +I AH H P +++ S N AS + D +
Sbjct: 274 WNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQS--NNTFASCSTD--M 329
Query: 149 CIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP 208
CI + + +G+ + E++ + W+ ++LAS S + T +W +K+
Sbjct: 330 CI-HVCKLGQDRPIKTFQGHTN----EVNAIKWDP-TGNLLASCSDDMTLKIWSMKQDNC 383
Query: 209 VISFSESIKRRCSVLQWNP------DVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG 262
V ++ + ++W+P + L++AS S +RLWD+ + +
Sbjct: 384 VHDL-QAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDS-TVRLWDVDRGIC-IHTLTK 440
Query: 263 HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGV 322
H + V ++++ P D YL + + D W+T +G +V GT F++ W
Sbjct: 441 HQEPVYSVAFSP-DGRYLASGSFDKCVHIWNTQTGALVHSY-RGTGGIFEVCWNAA-GDK 497
Query: 323 ISASSFDGKIGIYNI 337
+ AS+ DG + + ++
Sbjct: 498 VGASASDGSVCVLDL 512
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 151 (58.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 67/267 (25%), Positives = 104/267 (38%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGP--VRGLEFNSFTPN----LL 139
L+A G D + IWN +SG T ++ H R G + S N LL
Sbjct: 183 LLASGSGDSTARIWNLSENSTSGPT--QLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL 240
Query: 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTV 199
A+G+ DG IW + + G +G I + WN K IL S + TT+
Sbjct: 241 ATGSYDGFARIW-----TKDGNLASTLGQH---KGPIFALKWNKKGNFIL-SAGVDKTTI 291
Query: 200 VWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE 259
+WD + F V W + S + +L R P+K
Sbjct: 292 IWDAHTGEAKQQFPFHSAPALDV-DWQSN--NTFASCSTDMCIHVCKLGQDR----PIKT 344
Query: 260 FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKI 319
F GHT V A+ W P + L +C+ D W V +L A + I W P
Sbjct: 345 FQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 320 PG--------VISASSFDGKIGIYNIE 338
PG +++++SFD + +++++
Sbjct: 404 PGTNNPNANLMLASASFDSTVRLWDVD 430
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 73/315 (23%), Positives = 139/315 (44%)
Query: 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDI 98
+N ++ LD+ SE LL G S + F R+ W K+G+ + +LG G + ++
Sbjct: 224 SNKDVTSLDWNSEGT-LLATG---SYDGFARI-WTKDGNLAS--TLGQHKGPIF--ALK- 273
Query: 99 WNPL-SLISSGETGGNPLI--AHLSR-------HKGPVRGLEFNSFTPNLLASGADDGEI 148
WN + I S +I AH H P +++ S N AS + D +
Sbjct: 274 WNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQS--NNTFASCSTD--M 329
Query: 149 CIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP 208
CI + + +G+ + E++ + W+ ++LAS S + T +W +K+
Sbjct: 330 CI-HVCKLGQDRPIKTFQGHTN----EVNAIKWDP-TGNLLASCSDDMTLKIWSMKQDNC 383
Query: 209 VISFSESIKRRCSVLQWNP------DVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG 262
V ++ + ++W+P + L++AS S +RLWD+ + +
Sbjct: 384 VHDL-QAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDS-TVRLWDVDRGIC-IHTLTK 440
Query: 263 HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGV 322
H + V ++++ P D YL + + D W+T +G +V GT F++ W
Sbjct: 441 HQEPVYSVAFSP-DGRYLASGSFDKCVHIWNTQTGALVHSY-RGTGGIFEVCWNAA-GDK 497
Query: 323 ISASSFDGKIGIYNI 337
+ AS+ DG + + ++
Sbjct: 498 VGASASDGSVCVLDL 512
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 151 (58.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 67/267 (25%), Positives = 104/267 (38%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGP--VRGLEFNSFTPN----LL 139
L+A G D + IWN +SG T ++ H R G + S N LL
Sbjct: 183 LLASGSGDSTARIWNLSENSTSGPT--QLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL 240
Query: 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTV 199
A+G+ DG IW + + G +G I + WN K IL S + TT+
Sbjct: 241 ATGSYDGFARIW-----TKDGNLASTLGQH---KGPIFALKWNKKGNFIL-SAGVDKTTI 291
Query: 200 VWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE 259
+WD + F V W + S + +L R P+K
Sbjct: 292 IWDAHTGEAKQQFPFHSAPALDV-DWQSN--NTFASCSTDMCIHVCKLGQDR----PIKT 344
Query: 260 FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKI 319
F GHT V A+ W P + L +C+ D W V +L A + I W P
Sbjct: 345 FQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 320 PG--------VISASSFDGKIGIYNIE 338
PG +++++SFD + +++++
Sbjct: 404 PGTNNPNANLMLASASFDSTVRLWDVD 430
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 73/315 (23%), Positives = 139/315 (44%)
Query: 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDI 98
+N ++ LD+ SE LL G S + F R+ W K+G+ + +LG G + ++
Sbjct: 224 SNKDVTSLDWNSEGT-LLATG---SYDGFARI-WTKDGNLAS--TLGQHKGPIF--ALK- 273
Query: 99 WNPL-SLISSGETGGNPLI--AHLSR-------HKGPVRGLEFNSFTPNLLASGADDGEI 148
WN + I S +I AH H P +++ S N AS + D +
Sbjct: 274 WNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQS--NNTFASCSTD--M 329
Query: 149 CIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP 208
CI + + +G+ + E++ + W+ ++LAS S + T +W +K+
Sbjct: 330 CI-HVCKLGQDRPIKTFQGHTN----EVNAIKWDP-TGNLLASCSDDMTLKIWSMKQDNC 383
Query: 209 VISFSESIKRRCSVLQWNP------DVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG 262
V ++ + ++W+P + L++AS S +RLWD+ + +
Sbjct: 384 VHDL-QAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDS-TVRLWDVDRGIC-IHTLTK 440
Query: 263 HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGV 322
H + V ++++ P D YL + + D W+T +G +V GT F++ W
Sbjct: 441 HQEPVYSVAFSP-DGRYLASGSFDKCVHIWNTQTGALVHSY-RGTGGIFEVCWNAA-GDK 497
Query: 323 ISASSFDGKIGIYNI 337
+ AS+ DG + + ++
Sbjct: 498 VGASASDGSVCVLDL 512
>ASPGD|ASPL0000000923 [details] [associations]
symbol:AN6341 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0030479 "actin
cortical patch" evidence=IEA] [GO:0030139 "endocytic vesicle"
evidence=IEA] [GO:0035838 "growing cell tip" evidence=IEA]
[GO:0005826 "actomyosin contractile ring" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000166356
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 OMA:LQDRRIA
ProteinModelPortal:C8V0Z9 EnsemblFungi:CADANIAT00006644
Uniprot:C8V0Z9
Length = 611
Score = 152 (58.6 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 123/541 (22%), Positives = 208/541 (38%)
Query: 66 RFNRLAWGKN--GSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR-H 122
R +R AW N + + S+ AGG G+ + PL E G P L R H
Sbjct: 29 RVSRNAWDTNLVKANPKYLSVNWEAGG--GGAFAVI-PLE-----ERGKLPERIPLFRGH 80
Query: 123 KGPVRGLEFNSFTPNLLASGADDGEICIW------DLSAPAEPSHFPPLR--GNGSAAQG 174
V ++N F +L+ASG+DDG + +W LS + + G S
Sbjct: 81 TAVVLDTDWNPFNDDLIASGSDDGRVFLWRVPEGFTLSPDVDADDIQDVAPVGKLSGHPK 140
Query: 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKK--QKPVISFSESIKRRCSVLQWNPDVATQ 232
++ V +N ++ILA+ S + T +WD++ K ++ + ++ + W+ + +
Sbjct: 141 KVGHVLFNPAAENILATASGDYTVKIWDIEAGASKLTLNVGDIVQSQ----SWSANGS-- 194
Query: 233 LVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMS-WCPNDSSYLLT-CAK--DNR 288
L+V + D LR+WD+R P E GHT + S W + T +K D +
Sbjct: 195 LLVTTSRDKK--LRVWDVRQER-PAHEGQGHTGAKNSRSVWLGERDRFATTGFSKMSDRQ 251
Query: 289 TICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDS 348
WD S +LP D I GV DG +Y G GD
Sbjct: 252 LALWDIRS----PQLPIDGFKTLD-----SISGVCMPFWDDGTQCLYLA------GRGDG 296
Query: 349 NFSAAPLRAPKW-YKRPAGASFGFGGKLVSFHPKSSAG-HTSENSQ-HAPVHG--VDQSK 403
N L K+ Y ++ G ++F PK H +E ++ V+ ++
Sbjct: 297 NIRYFELENDKFEYLSEYKSADPQRG--IAFMPKRGVNMHENEVTRAFKTVNDTYIEPIS 354
Query: 404 YGMVDSSQQYYQEPVQSPLHQSVPGGT----YGDNYQQP----LGPYSNGRGYGASAAYQ 455
+ +V + +Q+ + P P + +G P +G +G+G Q
Sbjct: 355 F-IVPRRAETFQDDIYPPTVGLKPAMSASEWFGGKEAIPPKISMGSLYDGQGLKEVTGIQ 413
Query: 456 PAPQPGLFI---PPQATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQ 512
P L P ++P PAP T++ A P T PV++ A ++ G+
Sbjct: 414 DKPTSNLGTESKPEPKSEPE-AKPAPQVKTTESA-----PETTPVVKPAPSMKEQ--GAS 465
Query: 513 LYPGVSN--PGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVVQR 570
+ V+ P ++ PS+ + P +PT + F+ S +
Sbjct: 466 MAAMVNKFADDEEAEPAEESSFDEPSK-PIERATRSPGTSSPTVKDSPFLQKENSAKISS 524
Query: 571 P 571
P
Sbjct: 525 P 525
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 151 (58.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 53/201 (26%), Positives = 86/201 (42%)
Query: 116 IAH-LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQG 174
+AH + H P+ +F+ + LA+G+ D IWD P H L+G+ G
Sbjct: 144 LAHRIPGHGEPILCAQFSPASSARLATGSGDNTARIWDAET-GTPKH--TLKGHAGWVLG 200
Query: 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNP-----DV 229
VSW+ LA+ S + T +WD + K V S + + + W P D
Sbjct: 201 ----VSWSPDGTR-LATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDG 255
Query: 230 ATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSW-CPNDSSYLLTCAKDNR 288
+LV AS + ++ R+W + NT GH V + W N + + T + D
Sbjct: 256 TPRLVSASKDFTA---RIWTV-NTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKT 311
Query: 289 TICWDTVSGEIVSELPAGTNW 309
WD V G ++ +L + +W
Sbjct: 312 VKVWDAVKGTLLHDLKSHAHW 332
Score = 131 (51.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 48/167 (28%), Positives = 74/167 (44%)
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
Q++P + +L S ++++ R+WD T +P GH V+ +SW P D + L TC
Sbjct: 159 QFSPASSARLATGSGDNTA---RIWDAE-TGTPKHTLKGHAGWVLGVSWSP-DGTRLATC 213
Query: 284 AKDNRTICWDTVSGEIV-SELPAGTNWNFDIHWYPK------IPGVISASS-FDGKIGIY 335
+ D WD +G+ V SEL W I W P P ++SAS F +I
Sbjct: 214 SMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTV 273
Query: 336 NIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKS 382
N G + + + S + +R W GA G G + H K+
Sbjct: 274 NT-GRTEHVLSGHKGSVSCVR---W-----GAGNGTGVVYTASHDKT 311
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 147 (56.8 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 72/287 (25%), Positives = 131/287 (45%)
Query: 58 VGESPSSERFNRLAWGKNGSGSEDFSLGL--VAGGLVDGSIDIWNPLSLISSGETGGNPL 115
V E PS ER R ++ S DFSL +A G +D + IW+ + L
Sbjct: 6 VEEDPSLERHFR--GHRDAITSVDFSLNKKQLASGSMDSCLKIWS-----MKPQMRAYCL 58
Query: 116 IAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGE 175
+ H K V ++F+ + +L+ASG+ D +C+W S E + F A
Sbjct: 59 VGH----KDAVMCVQFSP-SGHLVASGSRDKTVCLWVPSVKGESTVF-------KAHTAT 106
Query: 176 ISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLV 234
+ V ++S Q L + S + T VW + +QK + S S+ I RC+ +++PD +L+
Sbjct: 107 VRSVHFSSDGQS-LVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCA--RFSPD--GRLI 161
Query: 235 VASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWD 293
++ +D + ++LWD + + + F H + + P S + A ++T+ WD
Sbjct: 162 ASASDDKT--VKLWD-KTSRECIHSFCEHGGFANHVEFHP--SGTCIAAAGTDKTVKVWD 216
Query: 294 TVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI-EG 339
++ T + ++P +I+AS+ D + I ++ EG
Sbjct: 217 VRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASN-DSTLKILDLLEG 262
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 147 (56.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 57/239 (23%), Positives = 103/239 (43%)
Query: 102 LSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT-PNLLASGADDGEICIWDLSAPAEPS 160
L L + + G PL + H V ++++ L+ SG+ D + +WD P
Sbjct: 92 LQLWDTAKATG-PLQVY-KEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD---PTVGK 146
Query: 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ--KPVISFSESIKR 218
RG+ S I W+ + AS S + T +WD+K + V+ ++
Sbjct: 147 SLCTFRGHESVIYSTI----WSPHIPGCFASASGDQTLRIWDVKSTGVRIVVPAHQAEIL 202
Query: 219 RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS 278
C ++N + L+V D S LR WD+RN PV E +GHT + + + P +S
Sbjct: 203 SCDWCKYNEN----LLVTGAVDCS--LRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHAS 256
Query: 279 YLLTCAKDNRTICWDTVSGE-IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336
L +C+ D W+ + ++ + T + + + P ++ ++D I IY+
Sbjct: 257 VLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCAWDETIKIYD 315
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 50/203 (24%), Positives = 96/203 (47%)
Query: 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWN-SKVQHILASTSYN 195
++L + + DG + +WD +A A PL+ Q E+ V W+ ++ + ++ S S++
Sbjct: 81 HILVTCSGDGSLQLWD-TAKATG----PLQVYKEHTQ-EVYSVDWSQTRGEQLVVSGSWD 134
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
T +WD K + +F S + W+P + AS + + LR+WD+++T
Sbjct: 135 QTVKLWDPTVGKSLCTFRGHESVIYSTI-WSPHIPGCFASASGDQT---LRIWDVKST-- 188
Query: 256 PVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS-GEIVSELPAGTNWNFDI 313
V+ V H +++ WC + + L+T A D WD + + V EL T +
Sbjct: 189 GVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRV 248
Query: 314 HWYPKIPGVISASSFDGKIGIYN 336
+ P V+++ S+D + +N
Sbjct: 249 KFSPFHASVLASCSYDFTVRFWN 271
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 35/128 (27%), Positives = 58/128 (45%)
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQK-PVISFSESIKRRCSVLQWNPDVATQLVVAS 237
V+W+ +HIL + S +G+ +WD K P+ + E + SV W+ QLVV+
Sbjct: 73 VTWSENNEHILVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSV-DWSQTRGEQLVVSG 131
Query: 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297
D + ++LWD S + F GH + + W P+ + + D WD S
Sbjct: 132 SWDQT--VKLWDPTVGKS-LCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKST 188
Query: 298 EIVSELPA 305
+ +PA
Sbjct: 189 GVRIVVPA 196
>SGD|S000000399 [details] [associations]
symbol:MSI1 "Subunit of chromatin assembly factor I (CAF-1)"
species:4932 "Saccharomyces cerevisiae" [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000399 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936 EMBL:Z21487
GO:GO:0006335 GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 EMBL:M27300 EMBL:Z36064 EMBL:AY692834
PIR:S07865 RefSeq:NP_009754.1 ProteinModelPortal:P13712 SMR:P13712
DIP:DIP-338N IntAct:P13712 MINT:MINT-386252 STRING:P13712
PaxDb:P13712 PeptideAtlas:P13712 EnsemblFungi:YBR195C GeneID:852494
KEGG:sce:YBR195C CYGD:YBR195c OMA:MPDVTKT OrthoDB:EOG44TSHP
NextBio:971486 Genevestigator:P13712 GermOnline:YBR195C
Uniprot:P13712
Length = 422
Score = 149 (57.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 49/210 (23%), Positives = 87/210 (41%)
Query: 93 DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWD 152
+G + +W+ PL++ ++ V + + +L A+ + + + D
Sbjct: 222 NGQVQVWDIKQYSHENPIIDLPLVS-INSDGTAVNDVTWMPTHDSLFAACTEGNAVSLLD 280
Query: 153 LSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK--QKPVI 210
L E L+ N G ++ +N K ILAS NG +WD++ + P+
Sbjct: 281 LRTKKEK-----LQSNREKHDGGVNSCRFNYKNSLILASADSNGRLNLWDIRNMNKSPIA 335
Query: 211 SFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAM 270
+ S L+W+P+ T L A ED ++LWD + + GH GV +
Sbjct: 336 TMEHGTS--VSTLEWSPNFDTVLATAGQEDG--LVKLWDT-SCEETIFTHGGHMLGVNDI 390
Query: 271 SWCPNDSSYLLTCAKDNRTICWDTVSGEIV 300
SW +D + + A DN W +G +V
Sbjct: 391 SWDAHDPWLMCSVANDNSVHIWKP-AGNLV 419
Score = 139 (54.0 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 52/215 (24%), Positives = 89/215 (41%)
Query: 129 LEFNSFTPNLLASGADDGEICIWDLS--APAEPSHFPPLRGNGSAAQGEISFVSWNSKVQ 186
L +N LL S +G++ +WD+ + P PL S ++ V+W
Sbjct: 206 LAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTA-VNDVTWMPTHD 264
Query: 187 HILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALR 246
+ A+ + + DL+ +K + S K V + L++AS DS+ L
Sbjct: 265 SLFAACTEGNAVSLLDLRTKKEKLQ-SNREKHDGGVNSCRFNYKNSLILAS-ADSNGRLN 322
Query: 247 LWDMRN-TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWDTVSGEIVSELP 304
LWD+RN SP+ + H V + W PN + L T +++ + WDT E +
Sbjct: 323 LWDIRNMNKSPIAT-MEHGTSVSTLEWSPNFDTVLATAGQEDGLVKLWDTSCEETIFTHG 381
Query: 305 AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339
DI W P ++ + + D + I+ G
Sbjct: 382 GHMLGVNDISWDAHDPWLMCSVANDNSVHIWKPAG 416
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 150 (57.9 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 69/270 (25%), Positives = 104/270 (38%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNP--LIAHLSRHKGP--VRGLEFNSFTPN---- 137
L+A G D + IWN +S TGG+ ++ H R G + S N
Sbjct: 179 LLASGSGDSTARIWN----LSESSTGGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGT 234
Query: 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGT 197
LLA+G+ DG IW + + G +G I + WN K IL S + T
Sbjct: 235 LLATGSYDGFARIW-----TKDGNLASTLGQH---KGPIFALKWNKKGNFIL-SAGVDKT 285
Query: 198 TVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPV 257
T++WD + F V W + S + +L R P+
Sbjct: 286 TIIWDAHTGEAKQQFPFHSAPALDV-DWQSN--NTFASCSTDMCIHVCKLGQER----PI 338
Query: 258 KEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYP 317
K F GHT V A+ W P + L +C+ D W V +L A + + I W P
Sbjct: 339 KTFQGHTNEVNAIKWDPT-GNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSP 397
Query: 318 KIPG---------VISASSFDGKIGIYNIE 338
PG + ++SFD + +++ E
Sbjct: 398 TGPGTNNPNANLMLARSASFDSTVRLWDAE 427
Score = 132 (51.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 72/315 (22%), Positives = 134/315 (42%)
Query: 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDI 98
+N ++ LD+ SE LL G S + F R+ W K+G+ + +LG G + ++
Sbjct: 220 SNKDVTSLDWNSEGT-LLATG---SYDGFARI-WTKDGNLAS--TLGQHKGPIF--ALK- 269
Query: 99 WNPL-SLISSGETGGNPLI--AHLSR-------HKGPVRGLEFNSFTPNLLASGADDGEI 148
WN + I S +I AH H P +++ S N AS + D +
Sbjct: 270 WNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQS--NNTFASCSTD--M 325
Query: 149 CIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP 208
CI E P++ E++ + W+ ++LAS S + T +W +K Q
Sbjct: 326 CIHVCKLGQER----PIK-TFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKLWSMK-QDT 378
Query: 209 VISFSESIKRRCSVLQWNP------DVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG 262
+ ++ + ++W+P + L++A +RLWD +
Sbjct: 379 CVHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGAC-IHTLTK 437
Query: 263 HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGV 322
H + V ++++ P D +L + + D W+T SG +V+ GT F++ W
Sbjct: 438 HQEPVYSVAFSP-DGRHLASGSFDKCVHIWNTQSGALVNSY-RGTGGIFEVCWN-STGDK 494
Query: 323 ISASSFDGKIGIYNI 337
+ AS+ DG + + ++
Sbjct: 495 VGASASDGSVCVLDL 509
>UNIPROTKB|Q9NZJ0 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0009411 "response to UV" evidence=IDA]
[GO:0019985 "translesion synthesis" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IDA] [GO:0006513
"protein monoubiquitination" evidence=IDA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IDA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0031572 "G2 DNA damage checkpoint"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IDA;TAS] [GO:0000209 "protein polyubiquitination"
evidence=IDA;TAS] [GO:0031465 "Cul4B-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0009411 EMBL:CH471100 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
GO:GO:0031965 eggNOG:COG2319 GO:GO:0006511 GO:GO:0000209
GO:GO:0031572 GO:GO:0006513 GO:GO:0031464 GO:GO:0031465
GO:GO:0019985 HOVERGEN:HBG057737 KO:K11790 CTD:51514 OMA:ICTYFHR
OrthoDB:EOG4N5VWH EMBL:AF345896 EMBL:DQ641253 EMBL:AF195765
EMBL:AK000742 EMBL:AK001206 EMBL:AK001261 EMBL:AK027651
EMBL:AK292343 EMBL:AL606468 EMBL:AC092814 EMBL:AL592297
EMBL:BC033540 EMBL:BC033297 IPI:IPI00643808 IPI:IPI00827740
RefSeq:NP_057532.2 UniGene:Hs.656473 ProteinModelPortal:Q9NZJ0
SMR:Q9NZJ0 IntAct:Q9NZJ0 STRING:Q9NZJ0 PhosphoSite:Q9NZJ0
DMDM:302393825 PaxDb:Q9NZJ0 PRIDE:Q9NZJ0 DNASU:51514
Ensembl:ENST00000366991 GeneID:51514 KEGG:hsa:51514 UCSC:uc001hiz.4
GeneCards:GC01P212208 H-InvDB:HIX0020157 HGNC:HGNC:30288
HPA:HPA028016 MIM:610617 neXtProt:NX_Q9NZJ0 PharmGKB:PA142671941
InParanoid:Q9NZJ0 GenomeRNAi:51514 NextBio:55210
ArrayExpress:Q9NZJ0 Bgee:Q9NZJ0 CleanEx:HS_DTL
Genevestigator:Q9NZJ0 Uniprot:Q9NZJ0
Length = 730
Score = 128 (50.1 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 48/203 (23%), Positives = 86/203 (42%)
Query: 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF-VSWNSKVQHILASTSYNG 196
L+++GA DG I +WDL P+ G + + ++S + ST +
Sbjct: 230 LVSAGAVDGIIKVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFAN 289
Query: 197 TT----VVWDLK--KQKPVISFSESIKRRCSVLQ-WNPDVATQLVVASDEDSSPALRLWD 249
T ++++ K PV F+ V +PD Q +V+ D A +W
Sbjct: 290 CTDDNIYMFNMTGLKTSPVAIFNGHQNSTFYVKSSLSPD--DQFLVSGSSDE--AAYIWK 345
Query: 250 MRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNW 309
+ P +GH++ V ++ WCP+D + + TC+ DN W G + E P G
Sbjct: 346 VSTPWQPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRG--LEEKPGGDKL 403
Query: 310 NFDIHWYPKI-----PGVISASS 327
+ + W + PG+++ +S
Sbjct: 404 S-TVGWASQKKKESRPGLVTVTS 425
Score = 65 (27.9 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 34/135 (25%), Positives = 54/135 (40%)
Query: 21 YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVG-ESPSSERFNRLAWGKNGSGS 79
Y G +FSS+ N+E L +E+ + L ES S + W + +
Sbjct: 43 YGETGVPVPPFGCTFSSAPNME-HVLAVANEEGFVRLYNTESQSFRKKCFKEWMAHWNAV 101
Query: 80 EDFSLGLVAGGL--VDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN 137
F L V G L V + D + +GE LI H+ ++ + F+ F
Sbjct: 102 --FDLAWVPGELKLVTAAGDQTAKFWDVKAGE-----LIGTCKGHQCSLKSVAFSKFEKA 154
Query: 138 LLASGADDGEICIWD 152
+ +G DG I +WD
Sbjct: 155 VFCTGGRDGNIMVWD 169
Score = 51 (23.0 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 429 GTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAPAP 478
G D + LGP + + GA + P P I P A++ T P P
Sbjct: 593 GNQEDLSKDSLGPTKSSKIEGAGTSISEPPSP---ISPYASESCGTLPLP 639
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 151 (58.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 60/235 (25%), Positives = 106/235 (45%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H GPV F + + LL S ++D I WDL + F N QG ++
Sbjct: 356 LRGHCGPVYSTRFLADSSGLL-SCSEDMSIRYWDLGS------FT----NTVLYQGH-AY 403
Query: 179 VSWN---SKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVV 235
W+ S AS S++ T +W + P+ ++ + ++++P+ + L
Sbjct: 404 PVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLAD-VDCVKFHPN-SNYLAT 461
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295
S + + +RLW + S V+ F GH V+++++ PN YL + +D R WD
Sbjct: 462 GSTDKT---VRLWSAQQGNS-VRLFTGHRGPVLSLAFSPN-GKYLASAGEDQRLKLWDLA 516
Query: 296 SGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG--CSRYGVGDS 348
SG + EL T+ + + P +I+++S D + +++I CS G S
Sbjct: 517 SGTLYKELRGHTDNITSLTFSPD-SSLIASASMDNSVRVWDIRNTYCSTPADGSS 570
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 155 (59.6 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 79/338 (23%), Positives = 155/338 (45%)
Query: 12 SVAFAPDAPYMAAGTMAGAVDLSFSSSANL---------EIFKLDFQSEDRDLLLVGESP 62
S+AF+PD +A+G+ +DL S++ L I+ + F + ++L +
Sbjct: 797 SLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDS 856
Query: 63 SSERFNRLAWGK--NGSGSEDFSLGLVAGGLVDGSIDIWNPL-SLISSGETGGNPLIAHL 119
+ + ++ LA G+ S S+ VA DG + + L S I L L
Sbjct: 857 TIKIWD-LATGELQQTLDSHSQSVRSVAFS-PDGKLLASSSLDSTIKVWNPATGELQQSL 914
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
G V+ + F+ LASG++ + +W+ PA L G+ + + ++F
Sbjct: 915 EGRSGWVKSVAFSP-DGKKLASGSEKNTVKLWN---PATGELLQTLEGHSQSVRS-VAF- 968
Query: 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS-ESIKRRCSVLQWNPDVATQLVVASD 238
S + K LAS+S + T +W+ + +F + R + ++PD LV SD
Sbjct: 969 SPDGKQ---LASSSSDTTIKLWNSTTGELQQTFKGHDLWIRA--VAFSPD-GKHLVSGSD 1022
Query: 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298
+++ ++LWD+ T + H++ V A+++ P+D L + + D+ WD+ +GE
Sbjct: 1023 DNT---IKLWDLA-TSELQQSLEDHSRSVHAVAFSPDDKQ-LASSSLDSTIKLWDSATGE 1077
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336
+ L + + + P +++++S+DG I ++N
Sbjct: 1078 LQRTLEGHSQGVRSVTFSPD-GKLLASNSYDGTIKLWN 1114
Score = 144 (55.7 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 88/341 (25%), Positives = 147/341 (43%)
Query: 4 IKGINRSA-SVAFAPDAPYMAAGTMAGAVDLSFSSSANLE-IFK---LDFQ----SEDRD 54
++G ++S SVAF+PD +A+ + + L S++ L+ FK L + S D
Sbjct: 956 LEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGK 1015
Query: 55 LLLVGESPSSERFNRLAWGKNGSGSEDFSLGL--VAGGLVDGSIDIWNPLSLISSGETGG 112
L+ G ++ + LA + ED S + VA D + + S I ++
Sbjct: 1016 HLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSAT 1075
Query: 113 NPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAA 172
L L H VR + F+ LLAS + DG I +W+ P L G
Sbjct: 1076 GELQRTLEGHSQGVRSVTFSP-DGKLLASNSYDGTIKLWN---PLTGELQQTLTGRSDWV 1131
Query: 173 QGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQ 232
++F S + K LAS Y+ T +WD + ++ E R + ++PD +
Sbjct: 1132 DS-VAF-SPDGKQ---LASGYYDSTIKLWDSATGE-LLQTLEGHSDRIQSVVFSPD--GK 1183
Query: 233 LVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-C 291
L+ + D + +LWD T ++ F GH+K V ++++ P+ LL + TI
Sbjct: 1184 LLASGSYDQTA--KLWDPA-TGELLQIFEGHSKWVESVAFSPDGK--LLASSSYGETIKL 1238
Query: 292 WDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKI 332
WD V+GE++ L + + P + S FD KI
Sbjct: 1239 WDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDTKI 1279
Score = 142 (55.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 54/199 (27%), Positives = 93/199 (46%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H GPV + F+ L+ SG+ D + IWD PA L G+ + ++F
Sbjct: 746 LENHLGPVESVVFSPDGKQLV-SGSYDDTVKIWD---PATGELLQTLDGHSGTVES-LAF 800
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASD 238
S + K +LAS SY+ T +WD + + +F SV + PD +L ASD
Sbjct: 801 -SPDGK---LLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVA-FAPD-GKELASASD 854
Query: 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298
DS+ +++WD+ T + H++ V ++++ P D L + + D+ W+ +GE
Sbjct: 855 -DST--IKIWDLA-TGELQQTLDSHSQSVRSVAFSP-DGKLLASSSLDSTIKVWNPATGE 909
Query: 299 IVSELPAGTNWNFDIHWYP 317
+ L + W + + P
Sbjct: 910 LQQSLEGRSGWVKSVAFSP 928
Score = 40 (19.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 7/34 (20%), Positives = 20/34 (58%)
Query: 639 KREIEDNSRKIGALFAKLNSGDISKNAADKLVQL 672
++ +ED+SR + A+ + ++ ++ D ++L
Sbjct: 1037 QQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKL 1070
>CGD|CAL0005164 [details] [associations]
symbol:SOF1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005164 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000210082 KO:K11806
InterPro:IPR007287 Pfam:PF04158 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717685.1 RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9
STRING:Q5A7Q9 GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 135 (52.6 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 45/202 (22%), Positives = 84/202 (41%)
Query: 148 ICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK 207
I +WD++ H L G+ G + F N +I+AS+ + + V++D++
Sbjct: 201 IQLWDVN---RSKHISDLSW-GADNVGTVKF---NQTETNIIASSGSDNSIVLYDIRTNT 253
Query: 208 PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGV 267
PV S++ C + WNP A +++ + L+DMRN +K + GH +
Sbjct: 254 PVHKVVTSLRNNC--ITWNPMEAFNFATGNEDHNG---YLYDMRNLQKTLKVYKGHVGAI 308
Query: 268 IAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWN-FDIHWYPKIPGVISAS 326
+ + + P L+T + D W T+ G F + + +IS S
Sbjct: 309 MDVDFAPTGQE-LVTGSYDKTIRLWKTLDGRSKDVYHTKRMQKVFSVKYSTDSKYIISGS 367
Query: 327 SFDGKIGIYNIEGCSRYGVGDS 348
D + ++ + SR + S
Sbjct: 368 D-DTNLRVWRSDASSRSNIKSS 388
Score = 59 (25.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 114 PLIAHLSR-HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF 162
P I L H+ V + N N +ASG+ DG I W+L+ E + F
Sbjct: 57 PFIGQLGDGHRDGVYFIAKNYQATNQIASGSGDGIIKYWNLTDRLETASF 106
>UNIPROTKB|Q5A7Q9 [details] [associations]
symbol:SOF1 "Putative uncharacterized protein SOF1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005164 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000210082 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:AACQ01000051 EMBL:AACQ01000050 RefSeq:XP_717685.1
RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9 STRING:Q5A7Q9
GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 135 (52.6 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 45/202 (22%), Positives = 84/202 (41%)
Query: 148 ICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK 207
I +WD++ H L G+ G + F N +I+AS+ + + V++D++
Sbjct: 201 IQLWDVN---RSKHISDLSW-GADNVGTVKF---NQTETNIIASSGSDNSIVLYDIRTNT 253
Query: 208 PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGV 267
PV S++ C + WNP A +++ + L+DMRN +K + GH +
Sbjct: 254 PVHKVVTSLRNNC--ITWNPMEAFNFATGNEDHNG---YLYDMRNLQKTLKVYKGHVGAI 308
Query: 268 IAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWN-FDIHWYPKIPGVISAS 326
+ + + P L+T + D W T+ G F + + +IS S
Sbjct: 309 MDVDFAPTGQE-LVTGSYDKTIRLWKTLDGRSKDVYHTKRMQKVFSVKYSTDSKYIISGS 367
Query: 327 SFDGKIGIYNIEGCSRYGVGDS 348
D + ++ + SR + S
Sbjct: 368 D-DTNLRVWRSDASSRSNIKSS 388
Score = 59 (25.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 114 PLIAHLSR-HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF 162
P I L H+ V + N N +ASG+ DG I W+L+ E + F
Sbjct: 57 PFIGQLGDGHRDGVYFIAKNYQATNQIASGSGDGIIKYWNLTDRLETASF 106
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 151 (58.2 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 68/292 (23%), Positives = 126/292 (43%)
Query: 73 GKNGSG-SEDFSLGLVAGGLVDGSIDIWNPLSLISSGE-------------TGGNPLIAH 118
G N S S D SL VAGG D SI +W+ + +G G N ++
Sbjct: 354 GLNCSSISHDGSL--VAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGRRSY 411
Query: 119 --LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEI 176
L H GPV F+ +L+S AD I +W L N +G
Sbjct: 412 TLLLGHSGPVYSATFSPPGDFVLSSSADT-TIRLWSTK----------LNANLVCYKGH- 459
Query: 177 SFVSWNSKVQ---HILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQL 233
++ W+++ H AS S++ T +W + + +P+ + + +QW+P+
Sbjct: 460 NYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSD-VDCVQWHPNC--NY 516
Query: 234 VVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
+ D + +RLWD++ T V+ F+GH V++++ P D Y+ + +D + WD
Sbjct: 517 IATGSSDKT--VRLWDVQ-TGECVRIFIGHRSMVLSLAMSP-DGRYMASGDEDGTIMMWD 572
Query: 294 TVSGEIVSELPAGTN---WNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342
+ ++ L G N W+ Y ++++ S D + ++++ ++
Sbjct: 573 LSTARCITPL-MGHNSCVWSLS---YSGEGSLLASGSADCTVKLWDVTSSTK 620
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 126 (49.4 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 32/106 (30%), Positives = 54/106 (50%)
Query: 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP 304
+RLW + S V+ F GH V+++S+ PN YL + +D R WD SG + EL
Sbjct: 4 VRLWSAQQGNS-VRLFTGHRGPVLSLSFSPN-GKYLASAGEDQRLKLWDLASGTLFKELR 61
Query: 305 AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG--CSRYGVGDS 348
T+ + + P G+I+++S D + +++I C+ G S
Sbjct: 62 GHTDSITSLAFSPD-SGLIASASMDNSVRVWDIRSTCCNTPADGSS 106
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 150 (57.9 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 60/236 (25%), Positives = 107/236 (45%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H GPV F + + LL S ++D I WDL + F N QG ++
Sbjct: 338 LRGHCGPVYSTRFLADSSGLL-SCSEDMSIRYWDLGS------FT----NTVLYQGH-AY 385
Query: 179 VSWN---SKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVV 235
W+ S AS S++ T +W + P+ ++ + ++++P+ + L
Sbjct: 386 PVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLAD-VDCVKFHPN-SNYLAT 443
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295
S + + +RLW + S V+ F GH V+++++ PN YL + +D R WD
Sbjct: 444 GSTDKT---VRLWSAQQGNS-VRLFTGHRGPVLSLAFSPN-GKYLASAGEDQRLKLWDLA 498
Query: 296 SGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG--CSRYGVGDSN 349
SG + EL T+ + + P +I+++S D + +++I CS G S+
Sbjct: 499 SGTLFKELRGHTDNITSLTFSPD-SSLIASASMDNSVRVWDIRNTHCSAPTDGSSS 553
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 147 (56.8 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 52/218 (23%), Positives = 103/218 (47%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H GPV G F+ + LL S ++D +W + S+ +G+ ++SF
Sbjct: 678 HSGPVYGCSFSPDSQYLL-SCSEDTTARLWSMETM---SNLVCYKGHNFPVW-DVSF--- 729
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
S A+ S++ T +W P+ F+ + C+ ++++P++ L S++ S
Sbjct: 730 -SPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSD-CNTVRFHPNI-NYLATGSNDKS 786
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301
+ RLW+++ T V+ F+GH + +++ P D L T +D I WD +G+ V
Sbjct: 787 A---RLWEIQ-TGKCVRIFMGHRAPIYTVAFSP-DGRLLATAGEDTSVILWDLSTGKKVK 841
Query: 302 ELPAGTNWNFDIHWYPKIPGVISAS-SFDGKIGIYNIE 338
++ T + + + G I AS S D + +++++
Sbjct: 842 KMDGHTKCVYSLDF--SCDGSILASGSSDCTVRLWDVK 877
Score = 55 (24.4 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 86 LVAGGLVDGSIDIWN 100
LVAGG D S+ IWN
Sbjct: 572 LVAGGFSDSSVKIWN 586
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 149 (57.5 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 75/271 (27%), Positives = 109/271 (40%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIA-HLSR---HKGPVRGLEFNSFTPN---- 137
L+A G D + IWN L+ S+G G L+ H R H P + S N
Sbjct: 193 LLASGSGDSTARIWN-LNENSNG--GSTQLVLRHCIREGWHDVP-SNKDVTSLDWNSDGT 248
Query: 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGT 197
LLA G+ DG IW E + G +G I + WN K +IL S + T
Sbjct: 249 LLAMGSYDGFARIW-----TENGNLASTLGQH---KGPIFALKWNKKGNYIL-SAGVDKT 299
Query: 198 TVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLW-DMRNTMSP 256
T++WD + F V W + T + RL D+ P
Sbjct: 300 TIIWDAHTGEAKQQFPFHSAPALDV-DWQNN--TTFASCGTDMCIHVCRLGCDL-----P 351
Query: 257 VKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWDTVSGEIVSELPAGTNWNFDIHW 315
VK F GHT V A+ W P S LL D+ T+ W V +L A + + I W
Sbjct: 352 VKTFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKW 409
Query: 316 YPKIPG--------VISASSFDGKIGIYNIE 338
P P +++++SFD + ++++E
Sbjct: 410 SPTGPATSNPNSSIMLASASFDSTVRLWDVE 440
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 74/316 (23%), Positives = 138/316 (43%)
Query: 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDI 98
+N ++ LD+ S D LL +G S + F R+ W +NG+ + +LG G + ++
Sbjct: 234 SNKDVTSLDWNS-DGTLLAMG---SYDGFARI-WTENGNLAS--TLGQHKGPIF--ALK- 283
Query: 99 WNPLS--LISSGETGGNPLI--AHLSR-------HKGPVRGLEFNSFTPNLLASGADDGE 147
WN ++S+G +I AH H P +++ + T + G D
Sbjct: 284 WNKKGNYILSAG-VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNT-TFASCGTD--- 338
Query: 148 ICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK 207
+CI + P G E++ + W+ +LAS S + T +W +K Q
Sbjct: 339 MCIHVCRLGCD---LPVKTFQGHT--NEVNAIKWDPSGM-LLASCSDDMTLKIWSMK-QD 391
Query: 208 PVISFSESIKRRCSVLQWNPD-VATQ-----LVVASDEDSSPALRLWDMRNTMSPVKEFV 261
+ ++ + ++W+P AT +++AS S +RLWD+ +
Sbjct: 392 ACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDS-TVRLWDVEQGVC-THTLT 449
Query: 262 GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPG 321
H + V ++++ P D YL + + D W+T SG +V GT F++ W +
Sbjct: 450 KHQEPVYSIAFSP-DGKYLASGSFDKCVHIWNTQSGSLVHSYQ-GTGGIFEVCWNAR-GD 506
Query: 322 VISASSFDGKIGIYNI 337
+ AS+ DG + + ++
Sbjct: 507 KVGASASDGSVCVLDL 522
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 45/175 (25%), Positives = 76/175 (43%)
Query: 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS 211
D+ P P+ LRG+ S E+ +WN V +LAS S + T +W+L + S
Sbjct: 164 DVEIP--PNKATVLRGHES----EVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGS 216
Query: 212 FSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL----------RLWDMRNTMSPVKEFV 261
++ + R C W+ + + V + D +S L R+W ++ +
Sbjct: 217 -TQLVLRHCIREGWHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLAST---L 272
Query: 262 GHTKG-VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHW 315
G KG + A+ W +Y+L+ D TI WD +GE + P + D+ W
Sbjct: 273 GQHKGPIFALKW-NKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 326
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 145 (56.1 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 52/194 (26%), Positives = 95/194 (48%)
Query: 115 LIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQG 174
++ L HK V G+ FN + NL+ SG+ D + IWD++ E + SA
Sbjct: 122 MVKTLKGHKEYVFGVSFNPQS-NLIVSGSFDENVRIWDVNT-GECTKMI------SAHSD 173
Query: 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLV 234
++ V +N + ++ S SY+GT +WD + + + S + S ++++P+ + V
Sbjct: 174 PVTGVHFN-RDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPN--GKFV 230
Query: 235 VASDEDSSPALRLWDMRNTMSPVKEFVGHT--KGVIAMSWCPNDSSYLLTCAKDNRTICW 292
+A D++ LRLW N +K + GH K I ++ +++T ++DN +
Sbjct: 231 LAGTLDNT--LRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIY 288
Query: 293 DTVSGEIVSELPAG 306
+ + EIV L AG
Sbjct: 289 NLQTREIVQTL-AG 301
>UNIPROTKB|Q92734 [details] [associations]
symbol:TFG "Protein TFG" species:9606 "Homo sapiens"
[GO:0008219 "cell death" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IMP] [GO:0004871 "signal
transducer activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007165 "signal transduction" evidence=IMP]
InterPro:IPR000270 Pfam:PF00564 SMART:SM00666 GO:GO:0005737
GO:GO:0008219 GO:GO:0043123 EMBL:CH471052 GO:GO:0004871 MIM:188550
Orphanet:146 EMBL:X85960 EMBL:Y07968 EMBL:AK093456 EMBL:BT007428
EMBL:CR456781 EMBL:AC068763 EMBL:BC001483 EMBL:BC009241
EMBL:BC023599 IPI:IPI00294619 RefSeq:NP_001007566.1
RefSeq:NP_001182407.1 RefSeq:NP_001182408.1 RefSeq:NP_006061.2
UniGene:Hs.518123 ProteinModelPortal:Q92734 SMR:Q92734
IntAct:Q92734 MINT:MINT-1156489 STRING:Q92734 PhosphoSite:Q92734
DMDM:223634676 PaxDb:Q92734 PRIDE:Q92734 DNASU:10342
Ensembl:ENST00000240851 Ensembl:ENST00000490574 GeneID:10342
KEGG:hsa:10342 UCSC:uc003due.3 CTD:10342 GeneCards:GC03P100428
H-InvDB:HIX0003505 HGNC:HGNC:11758 HPA:HPA019473 MIM:602498
MIM:604484 neXtProt:NX_Q92734 PharmGKB:PA36473 eggNOG:NOG85275
HOGENOM:HOG000132915 HOVERGEN:HBG009087 InParanoid:Q92734 KO:K09292
OMA:YTTQTSQ OrthoDB:EOG40K80D PhylomeDB:Q92734 ChiTaRS:TFG
GenomeRNAi:10342 NextBio:39217 ArrayExpress:Q92734 Bgee:Q92734
CleanEx:HS_TFG Genevestigator:Q92734 GermOnline:ENSG00000114354
Uniprot:Q92734
Length = 400
Score = 146 (56.5 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 69/212 (32%), Positives = 85/212 (40%)
Query: 377 SFHPKSSAGHT-SENSQHAPVHGVDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGTYGDNY 435
S SSA H Q P G Q++ G ++ Q YQ+ +Q G YG
Sbjct: 209 SIASSSSAAHPPGVQPQQPPYTGA-QTQAGQIEG--QMYQQ------YQQQAG--YGAQQ 257
Query: 436 QQ--PLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAPAPAPVTSQPAMRPFIPS 493
Q P P G Y AS + Q PQ QP APAPA + QP +P+
Sbjct: 258 PQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPA-FSGQPQQ---LPA 313
Query: 494 TPPVLRNAEQYQQPTLGSQLYPG-VSNP-GYPVPPVSDARGSLPSQIGAV-PGPKMPNVV 550
PP +QYQ +Q Y S P Y V P S G PSQ GA P P ++
Sbjct: 314 QPP-----QQYQASNYPAQTYTAQTSQPTNYTVAPASQP-GMAPSQPGAYQPRPGFTSLP 367
Query: 551 APT--PTPTGFMPMS------GSGVVQRPGMG 574
T P P+G P + G G Q PG G
Sbjct: 368 GSTMTPPPSGPNPYARNRPPFGQGYTQ-PGPG 398
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 144 (55.7 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 46/186 (24%), Positives = 93/186 (50%)
Query: 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQ 224
L+G A ++ ++ ++ ++S + + ++W L K+ S+ + +R
Sbjct: 7 LKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDK--SYGVAQRRMTGHSH 64
Query: 225 WNPDVAT----QLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYL 280
+ DV Q ++ D LRLWD+ T + FVGHTK V+++++ D+ +
Sbjct: 65 FVQDVVLSSDGQFALSGSWDGE--LRLWDLA-TGESTRRFVGHTKDVLSVAFS-TDNRQI 120
Query: 281 LTCAKDNRTI-CWDTVSGEI---VSELPAGTNWNFDIHWYPK--IPGVISASSFDGKIGI 334
++ ++D RTI W+T+ GE +SE W + + P +P ++SAS +D + +
Sbjct: 121 VSASRD-RTIKLWNTL-GECKYTISEADGHKEWVSCVRFSPNTLVPTIVSAS-WDKTVKV 177
Query: 335 YNIEGC 340
+N++ C
Sbjct: 178 WNLQNC 183
Score = 117 (46.2 bits), Expect = 0.00079, P = 0.00079
Identities = 40/168 (23%), Positives = 83/168 (49%)
Query: 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVV 200
SG+ DGE+ +WDL+ F G+ ++ V++++ + I+ S S + T +
Sbjct: 80 SGSWDGELRLWDLATGESTRRFV---GHTK----DVLSVAFSTDNRQIV-SASRDRTIKL 131
Query: 201 WD-LKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE 259
W+ L + K IS ++ K S ++++P+ +V++ D + +++W+++N
Sbjct: 132 WNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKT--VKVWNLQNCKLR-NT 188
Query: 260 FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT 307
GH+ + ++ P D S + KD + WD G+ + L AG+
Sbjct: 189 LAGHSGYLNTVAVSP-DGSLCASGGKDGVILLWDLAEGKKLYSLEAGS 235
>TAIR|locus:2143636 [details] [associations]
symbol:CDC20.5 "AT5G27570" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:AC007478 KO:K03363
HOGENOM:HOG000195514 GO:GO:0080008 IPI:IPI00534046
RefSeq:NP_198109.1 UniGene:At.65557 ProteinModelPortal:Q3E906
SMR:Q3E906 IntAct:Q3E906 STRING:Q3E906 PRIDE:Q3E906
EnsemblPlants:AT5G27570.1 GeneID:832817 KEGG:ath:AT5G27570
TAIR:At5g27570 InParanoid:Q3E906 OMA:ANESHSA PhylomeDB:Q3E906
ProtClustDB:CLSN2686954 Genevestigator:Q3E906 Uniprot:Q3E906
Length = 411
Score = 146 (56.5 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 55/239 (23%), Positives = 112/239 (46%)
Query: 79 SEDFSLGLVAGGLVDG-SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN 137
++DF L L+ G + +I + + + L + +G + + +GPV + + +
Sbjct: 90 ADDFYLNLLDWGSSNVLAIALGDTVYLWDAS-SGSTYKLVTIDEEEGPVTSINWTQDGLD 148
Query: 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGT 197
L A G D+ E+ +WD + + LRG + G ++ WN+ HIL + +G
Sbjct: 149 L-AIGLDNSEVQLWDCVSNRQVR---TLRGGHESRVGSLA---WNN---HILTTGGMDGK 198
Query: 198 TVVWDLKKQKPVI-SFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS- 255
V D++ + ++ ++ + C L+W+ + +L +++ + +WD R+ S
Sbjct: 199 IVNNDVRIRSSIVETYLGHTEEVCG-LKWS-ESGKKLASGGNDN---VVHIWDHRSVASS 253
Query: 256 -PVKE----FVGHTKGVIAMSWCPNDSSYLLTCAK--DNRTICWDTVSGEIVSELPAGT 307
P ++ F HT V A++WCP +S L T D + W+T +G ++ + G+
Sbjct: 254 NPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGS 312
>UNIPROTKB|Q7RXM4 [details] [associations]
symbol:NCU00202 "Coronin" species:367110 "Neurospora crassa
OR74A" [GO:0005826 "actomyosin contractile ring" evidence=ISS]
[GO:0005885 "Arp2/3 protein complex" evidence=ISS] [GO:0030479
"actin cortical patch" evidence=ISS] [GO:0034316 "negative
regulation of Arp2/3 complex-mediated actin nucleation"
evidence=ISS] [GO:0051015 "actin filament binding" evidence=ISS]
[GO:0051666 "actin cortical patch localization" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051015 GO:GO:0030479 GO:GO:0005826 GO:GO:0051666
GO:GO:0034316 GO:GO:0005885 HOGENOM:HOG000166356 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OrthoDB:EOG4TJ02B EMBL:AABX02000001
RefSeq:XP_956587.1 UniGene:Ncr.4234 ProteinModelPortal:Q7RXM4
STRING:Q7RXM4 EnsemblFungi:EFNCRT00000000015 GeneID:3872734
KEGG:ncr:NCU00202 Uniprot:Q7RXM4
Length = 683
Score = 149 (57.5 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 51/170 (30%), Positives = 80/170 (47%)
Query: 103 SLISSGETGGNPLIAHLSR-HKGPVRGLEFNSFTPNLLASGADDGEICIWDL-------S 154
++I E G P L R H V ++N F L+AS +DDG++ +W + +
Sbjct: 137 AVIPLNERGKLPDQIPLFRGHTAAVLDTDWNPFNDRLIASASDDGKVFVWQVPENFTLYT 196
Query: 155 APAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK-QKPVISFS 213
EP+ PL S ++ V +N ++ILAS+S + T WD++ Q P+
Sbjct: 197 DAEEPADVSPL-SKLSGHTRKVGHVLFNPAAENILASSSGDLTVKFWDVETGQAPIAIKH 255
Query: 214 ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGH 263
I + L W+ + T LV S + LR+WD+R S V E+ GH
Sbjct: 256 PDIVQS---LSWSAN-GTMLVTTSRDKK---LRVWDVRQ-QSAVHEYQGH 297
>UNIPROTKB|F5GZ90 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AL606468 EMBL:AC092814 EMBL:AL592297
HGNC:HGNC:30288 IPI:IPI01011401 ProteinModelPortal:F5GZ90
SMR:F5GZ90 Ensembl:ENST00000542077 UCSC:uc010ptb.2
ArrayExpress:F5GZ90 Bgee:F5GZ90 Uniprot:F5GZ90
Length = 688
Score = 128 (50.1 bits), Expect = 8.7e-07, Sum P(3) = 8.7e-07
Identities = 48/203 (23%), Positives = 86/203 (42%)
Query: 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF-VSWNSKVQHILASTSYNG 196
L+++GA DG I +WDL P+ G + + ++S + ST +
Sbjct: 188 LVSAGAVDGIIKVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFAN 247
Query: 197 TT----VVWDLK--KQKPVISFSESIKRRCSVLQ-WNPDVATQLVVASDEDSSPALRLWD 249
T ++++ K PV F+ V +PD Q +V+ D A +W
Sbjct: 248 CTDDNIYMFNMTGLKTSPVAIFNGHQNSTFYVKSSLSPD--DQFLVSGSSDE--AAYIWK 303
Query: 250 MRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNW 309
+ P +GH++ V ++ WCP+D + + TC+ DN W G + E P G
Sbjct: 304 VSTPWQPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRG--LEEKPGGDKL 361
Query: 310 NFDIHWYPKI-----PGVISASS 327
+ + W + PG+++ +S
Sbjct: 362 S-TVGWASQKKKESRPGLVTVTS 383
Score = 61 (26.5 bits), Expect = 8.7e-07, Sum P(3) = 8.7e-07
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 115 LIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWD 152
LI H+ ++ + F+ F + +G DG I +WD
Sbjct: 90 LIGTCKGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWD 127
Score = 51 (23.0 bits), Expect = 8.7e-07, Sum P(3) = 8.7e-07
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 429 GTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAPAP 478
G D + LGP + + GA + P P I P A++ T P P
Sbjct: 551 GNQEDLSKDSLGPTKSSKIEGAGTSISEPPSP---ISPYASESCGTLPLP 597
>TAIR|locus:2148518 [details] [associations]
symbol:CDC20.4 "AT5G26900" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 KO:K03363 HOGENOM:HOG000195514
ProtClustDB:CLSN2686954 EMBL:DQ056692 IPI:IPI00547954
RefSeq:NP_198042.1 UniGene:At.55028 ProteinModelPortal:Q4PSE4
SMR:Q4PSE4 IntAct:Q4PSE4 STRING:Q4PSE4 EnsemblPlants:AT5G26900.1
GeneID:832748 KEGG:ath:AT5G26900 TAIR:At5g26900 InParanoid:Q4PSE4
PhylomeDB:Q4PSE4 ArrayExpress:Q4PSE4 Genevestigator:Q4PSE4
Uniprot:Q4PSE4
Length = 444
Score = 146 (56.5 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 59/239 (24%), Positives = 109/239 (45%)
Query: 80 EDFSLGLVAGGLVDG-SIDIWNPLSL--ISSGETGGNPLIAHLSRHKGPVRGLEFNSFTP 136
+DFSL L+ G + +I + + + L SSG T + L+ + KGPV + +
Sbjct: 125 DDFSLNLLDWGSANVLAIALGDTVYLWDASSGST--SELVT-IDEDKGPVTSINWTQDGL 181
Query: 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG 196
+L A G D+ E+ +WD + + LRG + G ++ W++ HIL + +G
Sbjct: 182 DL-AVGLDNSEVQLWDCVSNRQVR---TLRGGHESRVGSLA---WDN---HILTTGGMDG 231
Query: 197 TTVVWDLKKQKPVI-SFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDM----- 250
V D++ + ++ ++ + C L+W+ Q +D + +WD
Sbjct: 232 KIVNNDVRIRSSIVETYLGHTEEVCG-LKWSESGNKQASGGNDN----VVHIWDRSLASS 286
Query: 251 RNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAK--DNRTICWDTVSGEIVSELPAGT 307
+ T + F HT V A++WCP +S L T D + W+T +G ++ + G+
Sbjct: 287 KQTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGS 345
>ASPGD|ASPL0000009210 [details] [associations]
symbol:AN4226 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 GO:GO:0030529
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158
ProteinModelPortal:C8V4A4 EnsemblFungi:CADANIAT00004434
Uniprot:C8V4A4
Length = 447
Score = 146 (56.5 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 63/255 (24%), Positives = 111/255 (43%)
Query: 93 DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWD 152
D +I +++P + SS E+ PL +L + G L + P AS + +I I+D
Sbjct: 129 DKTIKLFDPYN--SSSESP--PLATYLGQ--GAFTSLTHHRDQPFFAASSS---QISIYD 179
Query: 153 LSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF 212
LS PS P + + I+ V++N +LAST + + +++DL+ P+
Sbjct: 180 LS---RPSSTPSQTLHWPTSVDTITSVAFNQTETSVLASTGIDRSIILYDLRTSSPLSKL 236
Query: 213 SESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSW 272
+K + + WNP A VA+++ + + ++DMR + H V+ + +
Sbjct: 237 V--LKLASNAVSWNPMEAFNFAVANEDHN---VYMFDMRKMNRALNVLKDHVAAVMDVDF 291
Query: 273 CPNDSSYLLTCAKDNRTI-CWDTVSGEIVSELPAGTNWN-FDIHWYPKIPGVISASSFDG 330
P L+T + D RTI W+ +G F + P V+S S DG
Sbjct: 292 SPTGEE-LVTASYD-RTIRLWNRATGHSRDIYHTQRMQRVFSAKFTPDNKYVLSGSD-DG 348
Query: 331 KIGIYNIEGCSRYGV 345
I ++ R G+
Sbjct: 349 NIRLWRANASDRSGI 363
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 147 (56.8 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 73/269 (27%), Positives = 104/269 (38%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIA-HLSRHKGP--VRGLEFNSFTPN----L 138
L+A G D + IWN L +G L+ H R G + S N L
Sbjct: 189 LLASGSGDSTARIWN---LNENGSRASTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTL 245
Query: 139 LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198
LA+G+ DG IW E + G +G I + WN K +IL S + TT
Sbjct: 246 LATGSYDGFARIW-----TENGNLASTLGQH---KGPIFALKWNKKGNYIL-SAGVDKTT 296
Query: 199 VVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVK 258
++WD + F V W + T S + RL R PVK
Sbjct: 297 IIWDAHTGEAKQQFPFHSAPALDV-DWQNN--TTFASCSTDMCIHVCRLGCDR----PVK 349
Query: 259 EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWDTVSGEIVSELPAGTNWNFDIHWYP 317
F GHT V A+ W P S LL D+ T+ W V L A + I W P
Sbjct: 350 TFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSP 407
Query: 318 KIPG--------VISASSFDGKIGIYNIE 338
P +++++SFD + ++++E
Sbjct: 408 TGPTTSNPNSSIMLASASFDSTVRLWDME 436
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 75/316 (23%), Positives = 141/316 (44%)
Query: 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDI 98
+N ++ LD+ S D LL G S + F R+ W +NG+ + +LG G + ++
Sbjct: 230 SNKDVTSLDWNS-DGTLLATG---SYDGFARI-WTENGNLAS--TLGQHKGPIF--ALK- 279
Query: 99 WNPLS--LISSGETGGNPLI--AHLSR-------HKGPVRGLEFNSFTPNLLASGADDGE 147
WN ++S+G +I AH H P +++ + T AS + D
Sbjct: 280 WNKKGNYILSAG-VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTT--FASCSTDMC 336
Query: 148 ICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK 207
I + L F +G+ + E++ + W+ +LAS S + T +W +K+
Sbjct: 337 IHVCRLGCDRPVKTF---QGHTN----EVNAIKWDPSGM-LLASCSDDMTLKIWSMKQDA 388
Query: 208 PVISFSESIKRRCSVLQWNPDVAT------QLVVASDEDSSPALRLWDMRNTMSPVKEFV 261
V + ++ ++ ++W+P T +++AS S +RLWDM +
Sbjct: 389 CVHNL-QAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDS-TVRLWDMEQGVC-THTLR 445
Query: 262 GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPG 321
H + V ++++ P D YL + + D W+T SG +V GT F++ W +
Sbjct: 446 KHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNTQSGSLVHSYQ-GTGGIFEVCWNAQ-GD 502
Query: 322 VISASSFDGKIGIYNI 337
+ AS+ DG + + ++
Sbjct: 503 KVGASASDGSVCVLDL 518
Score = 129 (50.5 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 53/203 (26%), Positives = 87/203 (42%)
Query: 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS 211
D+ P P+ LRG+ S E+ +WN V +LAS S + T +W+L + S
Sbjct: 160 DVEIP--PNKATVLRGHES----EVFICAWNP-VSDLLASGSGDSTARIWNLNENGSRAS 212
Query: 212 FSESIKRRCSVLQWNPDVATQLVVAS-DEDSSPAL----------RLWDMRNTMSPVKEF 260
++ + R C + + DV + V S D +S L R+W ++
Sbjct: 213 -TQLVLRHC-IREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTENGNLAST--- 267
Query: 261 VGHTKG-VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKI 319
+G KG + A+ W +Y+L+ D TI WD +GE + P + D+ W
Sbjct: 268 LGQHKGPIFALKW-NKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNT 326
Query: 320 PGVISASSFDGKIGIYNIEGCSR 342
++ S D I + + GC R
Sbjct: 327 --TFASCSTDMCIHVCRL-GCDR 346
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 143 (55.4 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 52/205 (25%), Positives = 100/205 (48%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H G V ++FN ++ SG+ D + WD + +P P++ A G IS V
Sbjct: 108 HAGKVNTVQFNE-EATVILSGSIDSSVRCWDCRS-RKPE---PVQTLDEARDG-ISSVKV 161
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
+ H + + S +G +DL+ + +S S+ + + ++ D Q + S DS
Sbjct: 162 SD---HEILAGSVDGRVRRYDLRMGQ--VS-SDYVGSPITCTCFSRD--GQCTLISSLDS 213
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPND-SSYLLTCAKDNRTICWDTVSGEIV 300
+ LRL D ++T + E+VGH + C ++ +++++C++D + WD V G +
Sbjct: 214 T--LRLLD-KDTGELLGEYVGHKNQQYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALA 270
Query: 301 SELPAGTNWNFDIHWYPKIPGVISA 325
LP G+N + ++P P +++A
Sbjct: 271 LALPVGSNVVQSLAYHPTEPCLLTA 295
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 143 (55.4 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 52/205 (25%), Positives = 98/205 (47%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H G V ++FN ++ SG+ D + WD + +P P++ A G IS V
Sbjct: 108 HAGKVNTVQFNE-EATVILSGSIDSSVRCWDCRS-RKPE---PVQTLDEARDG-ISSVKV 161
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
+ H + + S +G +DL+ + + S C+ ++ D Q + S DS
Sbjct: 162 SD---HEILAGSVDGRVRRYDLRMGQVTSDYVGS-PITCTC--FSRD--GQCTLISSLDS 213
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPND-SSYLLTCAKDNRTICWDTVSGEIV 300
+ LRL D ++T + E+VGH + C ++ +++++C++D + WD V G +
Sbjct: 214 T--LRLLD-KDTGELLGEYVGHKNQKYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGSLA 270
Query: 301 SELPAGTNWNFDIHWYPKIPGVISA 325
LP G+N + ++P P +++A
Sbjct: 271 LALPVGSNVVQSLAYHPADPCLLTA 295
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 143 (55.4 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 52/221 (23%), Positives = 104/221 (47%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H G V ++FN ++ SG+ DG + WD + P++ + G IS
Sbjct: 105 LRGHAGKVNCVQFNE-EATVMLSGSIDGTVRCWDTRS----RRMEPIQILDESQDG-ISS 158
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASD 238
+ + +H L + S +G +DL+ + + + I + + ++ D Q ++S
Sbjct: 159 LKVS---EHELLTGSVDGRVRRYDLRMGQLQVDY---IGSPITCVCFSRD--GQCTLSSS 210
Query: 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDS-SYLLTCAKDNRTICWDTVSG 297
DS+ +RL D ++T + E+ GH + C D +++L+C++D WD V G
Sbjct: 211 LDST--VRLLD-KSTGEMLGEYSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYWDLVEG 267
Query: 298 EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
+ +LP G + ++P P +++ S +G++ ++ E
Sbjct: 268 SLTLKLPVGKAVVQSLSFHPTEPRLLT--SMEGRVQVWGAE 306
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 132 (51.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 55/196 (28%), Positives = 83/196 (42%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H V + F+ T LASG+ D + WDLS E HF +G+ + +
Sbjct: 110 LEGHSEAVISVAFSP-TGKYLASGSGDTTVRFWDLST--ETPHFT-CKGH----RHWVLS 161
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNP---DVATQLVV 235
+SW+ + LAS NG ++WD V + + L W P + + V
Sbjct: 162 ISWSPDGKK-LASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVA 220
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWD 293
+S +D S +R+WD T + + GHT+ V + W D LL A +RTI W
Sbjct: 221 SSSKDGS--VRVWD--TTAGRCERILTGHTQSVTCLRW-GGDG--LLYSASQDRTIKVWR 273
Query: 294 TVSGEIVSELPAGTNW 309
G + L +W
Sbjct: 274 AHDGVLCRTLQGHGHW 289
Score = 127 (49.8 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 44/157 (28%), Positives = 73/157 (46%)
Query: 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195
P L SG+DD + +W +PAE P R G Q I+ V + S I+AS S++
Sbjct: 341 PERLVSGSDDFTLFLW---SPAEDKK-PLARMTGH--QALINQVLF-SPDSRIVASASFD 393
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
+ +WD + K + S + + W+ D ++L+V+ DS+ L++WD++
Sbjct: 394 KSIKLWDGRTGKYLASLRGHVAAVYQIA-WSAD--SRLLVSGSSDST--LKVWDVK-AQK 447
Query: 256 PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
+ GH V A+ W P D + + KD W
Sbjct: 448 LATDLPGHADEVYAVDWSP-DGQRVASGGKDKCLRIW 483
Score = 106 (42.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 30/129 (23%), Positives = 62/129 (48%)
Query: 189 LASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLW 248
L S S + T +W + K ++ + + + ++PD +++V ++ D S ++LW
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPD--SRIVASASFDKS--IKLW 399
Query: 249 DMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTN 308
D R T + GH V ++W DS L++ + D+ WD + ++ ++LP +
Sbjct: 400 DGR-TGKYLASLRGHVAAVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQKLATDLPGHAD 457
Query: 309 WNFDIHWYP 317
+ + W P
Sbjct: 458 EVYAVDWSP 466
Score = 66 (28.3 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 19/73 (26%), Positives = 34/73 (46%)
Query: 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN----LLASG 142
+A G +G + +W+P + + G T L+ H + GL + N +AS
Sbjct: 171 LASGCKNGQVLLWDPSTGLQVGRT--------LTGHSKWITGLSWEPLHMNPECRYVASS 222
Query: 143 ADDGEICIWDLSA 155
+ DG + +WD +A
Sbjct: 223 SKDGSVRVWDTTA 235
Score = 49 (22.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 26/85 (30%), Positives = 38/85 (44%)
Query: 12 SVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLA 71
SVAF+P Y+A+G+ G + F + E + +L + SP ++ LA
Sbjct: 119 SVAFSPTGKYLASGS--GDTTVRFWDLST-ETPHFTCKGHRHWVLSISWSPDGKK---LA 172
Query: 72 WG-KNGSGSE-DFSLGLVAGGLVDG 94
G KNG D S GL G + G
Sbjct: 173 SGCKNGQVLLWDPSTGLQVGRTLTG 197
Score = 38 (18.4 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 26 TMAGAVDLSFSSSANLEIFKLDFQSED-RDLLLVGESPSSERFNRLAWGKNG----SGSE 80
TMA + D + + A E + ++D + L + +S R+N L G+ SGS+
Sbjct: 292 TMALSTDYALRTGA-FEPAEATVNAQDLQGSLKELKERASSRYN-LVRGQGPERLVSGSD 349
Query: 81 DFSLGL 86
DF+L L
Sbjct: 350 DFTLFL 355
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 136 (52.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 67/259 (25%), Positives = 113/259 (43%)
Query: 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSE 65
GINR V++ + P + G V++ F+ L++ + + + L E +
Sbjct: 151 GINR-VRVSWLGEEPVAGVWSEKGQVEV-FALRRLLQVVE---EPQALAAFLRDEQAQMK 205
Query: 66 RFNRLAWGKNGSG-SEDFSLGLVAGGLVDG----SIDIWNPLSLISSGETGGNPLIAHLS 120
A G G G + D+S V G L+ G +I +W P S P + H +
Sbjct: 206 PIFSFA-GHMGEGFALDWS-PRVTGRLLTGDCQKNIHLWTPTDG-GSWHVDQRPFVGH-T 261
Query: 121 RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVS 180
R V L+++ + AS + D I IWD+ A PS L +A G+++ +S
Sbjct: 262 RS---VEDLQWSPTENTVFASCSADASIRIWDIRAA--PSKACMLT-TATAHDGDVNVIS 315
Query: 181 WNSKVQHILASTSYNGTTVVWDLKKQK---PVISFSESIKRRCSVLQWNPDVATQLVVAS 237
W S+ + L S +G +WDL++ K PV +F + + SV +W+P + + AS
Sbjct: 316 W-SRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSV-EWHPQ-DSGVFAAS 372
Query: 238 DEDSSPALRLWDMRNTMSP 256
D + WD+ P
Sbjct: 373 GADHQ--ITQWDLAVERDP 389
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 42/178 (23%), Positives = 79/178 (44%)
Query: 205 KQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS---PVKEFV 261
+ KP+ SF+ + + L W+P V +L+ D + LW + S + FV
Sbjct: 203 QMKPIFSFAGHMGEGFA-LDWSPRVTGRLLTG---DCQKNIHLWTPTDGGSWHVDQRPFV 258
Query: 262 GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDT-VSGEIVSELPAGTNWNFDIH---WYP 317
GHT+ V + W P +++ +C+ D WD + L T + D++ W
Sbjct: 259 GHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSR 318
Query: 318 KIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFS--AAPLRAPKWYKRPAGASFGFGG 373
+ P ++S DG + I+++ + G + F AP+ + +W+ + +G F G
Sbjct: 319 REPFLLSGGD-DGALKIWDLRQF-KSGSPVATFKQHVAPVTSVEWHPQDSGV-FAASG 373
Score = 110 (43.8 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 27/120 (22%), Positives = 56/120 (46%)
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVATQLVV 235
+ W+ + AS S + + +WD++ + +++ + + +V+ W+ ++
Sbjct: 267 LQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSR--REPFLL 324
Query: 236 ASDEDSSPALRLWDMRN--TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
+ +D AL++WD+R + SPV F H V ++ W P DS D++ WD
Sbjct: 325 SGGDDG--ALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQITQWD 382
Score = 55 (24.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 6/19 (31%), Positives = 15/19 (78%)
Query: 312 DIHWYPKIPGVISASSFDG 330
++HW+P+ PG++ +++ G
Sbjct: 419 ELHWHPQCPGLLVSTALSG 437
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 133 (51.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 63/243 (25%), Positives = 107/243 (44%)
Query: 73 GKNGSG-SEDFSLGLVAGGLVDG----SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVR 127
G G G + D+S V+G L+ G +I +W P S P + H +R V
Sbjct: 206 GHMGEGFALDWS-PRVSGRLLTGDCQKNIHLWTPTDG-GSWHVDQRPFMGH-TRS---VE 259
Query: 128 GLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQH 187
L+++ + AS + D I IWD+ A PS L SA G+++ ++W S+ +
Sbjct: 260 DLQWSPTEDTVFASCSADASIRIWDIRAA--PSKACMLTTT-SAHDGDVNVINW-SRREP 315
Query: 188 ILASTSYNGTTVVWDLKKQK---PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244
L S +G +WDL++ K PV +F + + SV +W+P + + AS D+
Sbjct: 316 FLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPITSV-EWHPQ-DSGVFAASGADNQ-- 371
Query: 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDT-VSGEIVSEL 303
+ WD+ P G T+ ++ P ++ D + + W G +VS
Sbjct: 372 ITQWDLAVERDPE---AGDTETDPGLADLPQQLLFVHQGETDLKELHWHPQCPGVLVSTA 428
Query: 304 PAG 306
+G
Sbjct: 429 LSG 431
Score = 58 (25.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 312 DIHWYPKIPGVISASSFDG 330
++HW+P+ PGV+ +++ G
Sbjct: 413 ELHWHPQCPGVLVSTALSG 431
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 160 (61.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 50/227 (22%), Positives = 111/227 (48%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H V L+ + +L +G +D ++ +W A +P+ L G+ S I V++
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLW---AIGKPNAILSLYGHSSG----IDSVTF 67
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
++ + ++A+ + +GT +WDL++ K V + + + C + ++P + + D+
Sbjct: 68 DAS-EGLVAAGAASGTIKLWDLEEAKVVRTLTGH-RSNCVSVNFHP--FGEFFASGSLDT 123
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301
+ L++WD+R + + GHT+GV + + P D ++++ +DN WD +G+++
Sbjct: 124 N--LKIWDIRKK-GCIHTYKGHTRGVNVLRFTP-DGRWIVSGGEDNVVKVWDLTAGKLLH 179
Query: 302 ELPA--GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVG 346
E + G + D H + + ++ S D + +++E G G
Sbjct: 180 EFKSHEGKIQSLDFHPHEFL---LATGSADKTVKFWDLETFELIGSG 223
Score = 42 (19.8 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 12/47 (25%), Positives = 19/47 (40%)
Query: 529 DARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVVQRPGMGS 575
+ RG + G V N+ AP P+ + G+ V G+ S
Sbjct: 618 ERRGRFSNFEGPVSSSSGGNMTAPNSRPSNMLKQRGNHVPVDQGITS 664
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 468 ATQPNFTAPAPA---PVTSQPAMRPFI-PSTPPVLRNAEQ 503
A++ NF P PV ++ P I P T P++ A +
Sbjct: 446 ASKRNFGKANPKANPPVVNKEDYFPVIVPRTEPIIEQASE 485
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 55/211 (26%), Positives = 95/211 (45%)
Query: 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195
P L +G+DDG + +WD+ A F ++ V++N I+ S +
Sbjct: 154 PQLACTGSDDGTVKLWDIRKKASVHTFQNTY--------QVLSVTFNDTSDQII-SGGID 204
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
VWDL++ K + S SV + ++++ D+S +R+WD+R +
Sbjct: 205 NDIKVWDLRQNKLIYSMQG---HGDSVTGLSLSADGSYLLSNSMDNS--VRVWDIR-PFA 258
Query: 256 P----VKEFVGHT----KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT 307
P VK F G+ K ++ SW D S + + D WDT + IV +LP
Sbjct: 259 PKERCVKIFQGNVHNFEKNLLRCSWSA-DGSKIAAGSADRFVYIWDTTTRRIVYKLPGHA 317
Query: 308 NWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
++ ++P+ P V+S SS D ++ I I+
Sbjct: 318 GSVNEVAFHPEEPIVLSGSS-DKRLYIGEIQ 347
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 51/178 (28%), Positives = 83/178 (46%)
Query: 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEI 176
A L H G V L +N+ +LL S + D +C+WD S E L+G+ S
Sbjct: 93 ATLKGHSGAVMELHYNT-DGSLLFSASTDKTVCVWD-SETGE--RVKRLKGHTSFVNS-- 146
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVA 236
F + + + + S +GT +WD++K+ V +F + + SV +N D + Q++
Sbjct: 147 CFPA--RRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQV-LSVT-FN-DTSDQIISG 201
Query: 237 S-DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
D D +++WD+R + GH V +S D SYLL+ + DN WD
Sbjct: 202 GIDND----IKVWDLRQNKL-IYSMQGHGDSVTGLSLSA-DGSYLLSNSMDNSVRVWD 253
>TAIR|locus:2030387 [details] [associations]
symbol:AT1G20540 "AT1G20540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0080008 eggNOG:NOG314403 ProtClustDB:CLSN2682746
EMBL:AY093157 EMBL:BT000290 IPI:IPI00532337 RefSeq:NP_173478.2
UniGene:At.25733 UniGene:At.70424 ProteinModelPortal:Q8RWD8
SMR:Q8RWD8 STRING:Q8RWD8 PaxDb:Q8RWD8 PRIDE:Q8RWD8
EnsemblPlants:AT1G20540.1 GeneID:838642 KEGG:ath:AT1G20540
TAIR:At1g20540 InParanoid:Q8RWD8 OMA:GMDCEAR PhylomeDB:Q8RWD8
ArrayExpress:Q8RWD8 Genevestigator:Q8RWD8 Uniprot:Q8RWD8
Length = 351
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 66/270 (24%), Positives = 110/270 (40%)
Query: 110 TGGNPLIAH-LSRHKGPVRGLEFNSFTPNLLASGADDGE---ICIWDLSAPAEPSHFPPL 165
+GG+ LI L H + L F + ++ GE IW + + P L
Sbjct: 51 SGGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGESFGAAIWQIPELYGQLNSPQL 110
Query: 166 RGNGS--AAQGEISFVSW--NSKVQHILASTSYNGTTVVWDL---KKQKPVISF-SESIK 217
S A G+I+ V W + + +++ N +W L KK V+S S +
Sbjct: 111 ERVASLDAHVGKINCVLWWPSGRCDKLISIDEQN--IFLWSLDCSKKSAEVLSKDSAGML 168
Query: 218 RRCSVLQWNP-DVATQLVVASDEDSSPALRLWDMRNTMSPVKEFV-GHTKGVIAMSWCPN 275
S W+P DV V A+ E S ++ WD+R TM V H +GV + P
Sbjct: 169 HSLSGGAWDPHDV--NAVAATGESS---VQFWDLR-TMKKVNSIEHAHVRGV---DYNPK 219
Query: 276 DSSYLLTCAKDNRTICWDTVSGEI-VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGI 334
L+T ++ WD ++ V ELP T+W + + P+ G+I ++ D + +
Sbjct: 220 REHILVTAEDESGIHVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVVNL 279
Query: 335 YNIEGCSRYGVGDSNFSAAPLRAPKWYKRP 364
+ S D S +P+ + + P
Sbjct: 280 WYASATS----SDDKTSESPVESTRQRVNP 305
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 125 (49.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 50/211 (23%), Positives = 91/211 (43%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
HK +R F+ T N A+ +DDG + IWD E LRG+G+ ++ V W
Sbjct: 201 HKEAIREASFSP-TDNKFATCSDDGTVRIWDFLRCHEERI---LRGHGA----DVKCVDW 252
Query: 182 NSKVQHILASTSYNGTTVV--WDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDE 239
+ + ++ S S + + WD K + + + + K ++ N + L+ AS +
Sbjct: 253 HP-TKGLVVSGSKDSQQPIKFWDPKTGQSLATL-HAHKNTVMEVKLNLN-GNWLLTASRD 309
Query: 240 DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDT-VSGE 298
+L+D+RN ++ F GH K A++W P + D + W V E
Sbjct: 310 H---LCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKE 366
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFD 329
+ A + + W+P + ++ + S D
Sbjct: 367 VGGMEMAHEGMIWSLAWHP-LGHILCSGSND 396
Score = 101 (40.6 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 46/221 (20%), Positives = 94/221 (42%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H PVR + + S + + G + W + ++ + + A + E SF
Sbjct: 157 LQAHDSPVRAMTW-SHNDMWMLTADHGGYVKYWQ----SNMNNVKMFQAHKEAIR-EASF 210
Query: 179 VSWNSKVQHILASTSYNGTTVVWD-LKKQKPVISFSESIKRRCSVLQWNPDVATQLVVAS 237
++K A+ S +GT +WD L+ + I +C + W+P LVV+
Sbjct: 211 SPTDNK----FATCSDDGTVRIWDFLRCHEERILRGHGADVKC--VDWHPTKG--LVVSG 262
Query: 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297
+DS ++ WD + S + H V+ + N ++LLT ++D+ +D +
Sbjct: 263 SKDSQQPIKFWDPKTGQS-LATLHAHKNTVMEVKLNLN-GNWLLTASRDHLCKLFDIRNL 320
Query: 298 EIVSELPAGTNWNFD-IHWYPKIPGVISASSFDGKIGIYNI 337
+ ++ G + W+P G+ ++ DG + +++
Sbjct: 321 KEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 361
Score = 77 (32.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 46/168 (27%), Positives = 60/168 (35%)
Query: 417 PVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAP 476
P Q P+ Q +P G +QQPL P P PQ G F PP Q
Sbjct: 589 PGQGPMSQ-MPQG-----FQQPLPPQQIPMNMPQMGP--PGPQ-GQFRPP-GPQGQMGPQ 638
Query: 477 APAPVTSQPAMRPFI-PSTPPVLRNAEQYQQPT-----LGSQLYPGVSNPGYPVPPVSDA 530
P + F+ P PP + +P G Q +PG P P P +A
Sbjct: 639 GPPLHQGGGGPQGFMGPQGPPGPHGPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGNA 698
Query: 531 --RGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVVQRPGMGSM 576
+G L Q +PG + P P G + G G+ PG M
Sbjct: 699 GPQGHLGPQ--GLPGSQTHLGPQGPPGPQGNLGPQGQGMQGPPGPRGM 744
Score = 56 (24.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 23/83 (27%), Positives = 35/83 (42%)
Query: 379 HPKSSAGHTSENSQHAP-VHGVDQSKYGMVDSSQQYYQEPVQS-PLHQSVPGGTYGDNYQ 436
HP GH+ N + + + G+D + + + ++ P S P PGG
Sbjct: 1190 HPPHD-GHSPANRERSSSLQGMDMAS--LPPRKRPWHDGPGTSDPREMDAPGG------- 1239
Query: 437 QPLGPYSNGRGYGASAAYQPAPQ 459
P P G+G G S A Q AP+
Sbjct: 1240 -P--PEERGKGRGNSGASQRAPK 1259
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 146 (56.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 50/222 (22%), Positives = 104/222 (46%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H GPV G+ F+ N L S ++DG I +W L F L G +G ++
Sbjct: 495 LHGHSGPVYGVSFSP-DRNYLLSSSEDGTIRLWSLQT------FTCLVGY----KGH-NY 542
Query: 179 VSWNSKVQ---HILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVV 235
W+++ + S ++ +W +P+ F+ + + +++P+ + V
Sbjct: 543 PVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLAD-VTCTRFHPN--SNYVA 599
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295
D + +RLWD+ N + V+ F GH + ++++ PN +L + + D R + WD
Sbjct: 600 TGSSDRT--VRLWDVLNG-NCVRIFTGHKGPIHSLAFSPN-GKFLASGSTDGRVLLWDIG 655
Query: 296 SGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
G +++EL T + + + + +I++ S D + ++++
Sbjct: 656 HGLMIAELKGHTGTIYALK-FSRDGEIIASGSIDNTVRLWDV 696
Score = 49 (22.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 45 KLDFQSEDRDLLLVG-ESPSSERFNRLAWGKNGSGSEDFS--LGLVAGGLVDGSIDIWN 100
K+ + E + +G E+ S F G + DF+ L+AGG D ++ +W+
Sbjct: 396 KIMYMKESTKRIRLGPETLPSICFYTFLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWS 454
>UNIPROTKB|Q6PJI9 [details] [associations]
symbol:WDR59 "WD repeat-containing protein 59" species:9606
"Homo sapiens" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006575 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50908
SMART:SM00320 SMART:SM00591 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Gene3D:3.10.110.10 InterPro:IPR016135 OMA:TGGWNIA EMBL:AK022332
EMBL:AK091316 EMBL:AF370390 EMBL:BC004519 EMBL:BC014887
EMBL:AB067510 IPI:IPI00012257 IPI:IPI00242841 IPI:IPI00644331
IPI:IPI00646489 RefSeq:NP_085058.3 UniGene:Hs.280951
ProteinModelPortal:Q6PJI9 SMR:Q6PJI9 IntAct:Q6PJI9 STRING:Q6PJI9
PhosphoSite:Q6PJI9 DMDM:134035358 PaxDb:Q6PJI9 PRIDE:Q6PJI9
Ensembl:ENST00000262144 GeneID:79726 KEGG:hsa:79726 UCSC:uc002fdf.1
UCSC:uc002fdg.1 CTD:79726 GeneCards:GC16M074908 H-InvDB:HIX0013239
HGNC:HGNC:25706 HPA:HPA041084 neXtProt:NX_Q6PJI9
PharmGKB:PA142670593 HOGENOM:HOG000004834 HOVERGEN:HBG092820
InParanoid:Q6PJI9 OrthoDB:EOG4CNQQ9 GenomeRNAi:79726 NextBio:69094
Bgee:Q6PJI9 CleanEx:HS_WDR59 Genevestigator:Q6PJI9 Uniprot:Q6PJI9
Length = 974
Score = 148 (57.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 42/145 (28%), Positives = 69/145 (47%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE G L H + L++ F P+LL + + D I IWD+ +P+ L
Sbjct: 94 SGEVGTT-----LQGHTRVISDLDWAVFEPDLLVTSSVDTYIYIWDIKDTRKPT--VALS 146
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWN 226
A+Q V WN K + LA TS++G +WD +K + + + + L W+
Sbjct: 147 AVAGASQ-----VKWNKKNANCLA-TSHDGDVRIWDKRKPSTAVEYLAAHLSKIHGLDWH 200
Query: 227 PDVATQLVVASDEDSSPALRLWDMR 251
PD + ++ S +D+S ++ WD R
Sbjct: 201 PD-SEHILATSSQDNS--VKFWDYR 222
Score = 136 (52.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 35/129 (27%), Positives = 58/129 (44%)
Query: 169 GSAAQGE---ISFVSWNSKVQHILASTSYNGTTVVWDLKK-QKPVISFSESIKRRCSVLQ 224
G+ QG IS + W +L ++S + +WD+K +KP ++ S S ++
Sbjct: 98 GTTLQGHTRVISDLDWAVFEPDLLVTSSVDTYIYIWDIKDTRKPTVALSAVAG--ASQVK 155
Query: 225 WNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA 284
WN A L + D D +R+WD R + V+ H + + W P+ L T +
Sbjct: 156 WNKKNANCLATSHDGD----VRIWDKRKPSTAVEYLAAHLSKIHGLDWHPDSEHILATSS 211
Query: 285 KDNRTICWD 293
+DN WD
Sbjct: 212 QDNSVKFWD 220
>UNIPROTKB|E1BJV8 [details] [associations]
symbol:LOC539953 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0031572 "G2 DNA damage checkpoint" evidence=IEA] [GO:0031465
"Cul4B-RING ubiquitin ligase complex" evidence=IEA] [GO:0031464
"Cul4A-RING ubiquitin ligase complex" evidence=IEA] [GO:0019985
"translesion synthesis" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005813 GO:GO:0009411
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0004842 GO:GO:0031572 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 KO:K11790
GeneTree:ENSGT00530000064210 OMA:ICTYFHR EMBL:DAAA02043770
IPI:IPI00695259 RefSeq:XP_003587156.1 Ensembl:ENSBTAT00000024147
GeneID:539953 KEGG:bta:539953 Uniprot:E1BJV8
Length = 730
Score = 122 (48.0 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 42/163 (25%), Positives = 70/163 (42%)
Query: 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF-VSWNSKVQHILASTSYNG 196
L+++GA DG I IWDL P+ G + + ++S + ST +
Sbjct: 230 LVSAGAVDGIIKIWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFAN 289
Query: 197 TT----VVWDLK--KQKPVISFSESIKRRCSVLQW-NPDVATQLVVASDEDSSPALRLWD 249
T ++++ K PV FS V +PD Q +V+ D A +W
Sbjct: 290 CTDDNIYMFNMTGLKTSPVAVFSGHQNSTFYVKSSISPD--DQFLVSGSSDE--AAYIWK 345
Query: 250 MRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
+ P +GH++ V ++ WCP+D + + TC+ DN W
Sbjct: 346 VSMPWHPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTLKVW 388
Score = 68 (29.0 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 34/135 (25%), Positives = 57/135 (42%)
Query: 21 YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVG-ESPSSERFNRLAWGKNGSGS 79
Y GT +FSS+ ++E L +E+ + L ES +S + W + +
Sbjct: 43 YGETGTPVPPFGCTFSSAPSMEHI-LAVANEEGFVRLYNTESHTSRKKCIKEWMAHWNAV 101
Query: 80 EDFSLGLVAGG--LVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN 137
F L V G LV + D +++GE LI H+ ++ + F+ F
Sbjct: 102 --FDLAWVPGEFKLVTAAGDQTAKFWDVNAGE-----LIGTCKGHQCSLKSVAFSKFEKA 154
Query: 138 LLASGADDGEICIWD 152
+ +G DG I +WD
Sbjct: 155 VFCTGGRDGNIMVWD 169
Score = 48 (22.0 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 19/65 (29%), Positives = 27/65 (41%)
Query: 416 EPVQSPLHQSVP--GGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNF 473
+PV+ LH + G D + LGP + GAS + P P P A++
Sbjct: 579 DPVEK-LHLDLCCLAGAQEDLGKDSLGPTKPSKIEGASMSVSEPPSPA---SPYASEGCG 634
Query: 474 TAPAP 478
T P P
Sbjct: 635 TLPLP 639
>UNIPROTKB|Q6DIF4 [details] [associations]
symbol:wdr1 "WD repeat-containing protein 1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0003779 "actin binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005884 "actin filament"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0030043 "actin filament fragmentation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0003779
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011045 SUPFAM:SSF50974
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005884
GO:GO:0030043 HSSP:Q02793 HOVERGEN:HBG000780 CTD:9948 EMBL:BC075588
RefSeq:NP_001006781.1 UniGene:Str.22875 ProteinModelPortal:Q6DIF4
STRING:Q6DIF4 GeneID:448473 KEGG:xtr:448473 Xenbase:XB-GENE-489897
Uniprot:Q6DIF4
Length = 607
Score = 145 (56.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 69/304 (22%), Positives = 128/304 (42%)
Query: 15 FAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGK 74
+AP Y+A+G +G + + + ++ + K ++Q + + + S+R + G+
Sbjct: 66 YAPSGFYIASGDTSGKLRI-WDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 124
Query: 75 NGSGS-----EDFSLGLVAGGL-VDGSIDI--WNPLSLISSGETG------GNPLIAH-- 118
GS S+G ++G + V S+DI P L++ + G P
Sbjct: 125 EKFGSVFLWDTGSSVGEISGNIKVINSVDIKQTRPYRLVTGSDDNCCAFFEGPPFKFKFT 184
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
++ H V + F+ L ++GAD G+I ++D + + G A G I
Sbjct: 185 MADHSRFVNCVRFSPDGSRLASAGAD-GQIFLYDGKTGEKVGNL----GGSKAHDGGIYA 239
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF---SESIKRRCSVLQWNPDVATQLVV 235
VSW++ +L S S + T +WD+ V +F +E + ++ L W D + +
Sbjct: 240 VSWSADSTQLL-SASGDKTAKIWDVAANSAVTTFHLGTEVLDQQLGCL-WQKDYLLSVSL 297
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDS-SYLLTCAKDNRTICWDT 294
S + D N P++ GH K + M+ +D S + T + D WD
Sbjct: 298 ------SGYINYLDKNNPSRPLRVIKGHNKSIQCMTVHNSDGRSTIYTGSHDGHINYWDA 351
Query: 295 VSGE 298
+GE
Sbjct: 352 ETGE 355
Score = 47 (21.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 321 GVISASSFDGKIGIYNIEGCSRYGVGDS 348
G ++ DG + +Y+I+G S G S
Sbjct: 458 GTVAVGGVDGNVHLYSIQGNSLKDEGKS 485
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 67/270 (24%), Positives = 102/270 (37%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGP--VRGLEFNSFTPN----LL 139
L+A G D + IWN +SG T ++ H R G + S N LL
Sbjct: 183 LLASGSGDSTARIWNLSENSTSGST--QLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL 240
Query: 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTV 199
A+G+ DG IW + + G +G I + WN K IL S + TT+
Sbjct: 241 ATGSYDGFARIW-----TKDGNLASTLGQH---KGPIFALKWNKKGNFIL-SAGVDKTTI 291
Query: 200 VWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE 259
+WD + F V W + S + +L R P+K
Sbjct: 292 IWDAHTGEAKQQFPFHSAPALDV-DWQSN--NTFASCSTDMCIHVCKLGQDR----PIKT 344
Query: 260 FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKI 319
F GHT V A+ W P + L +C+ D W V +L A + I W P
Sbjct: 345 FQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTG 403
Query: 320 PGV-----------ISASSFDGKIGIYNIE 338
PG + ++SFD + +++++
Sbjct: 404 PGTNNPNANLMLASLDSASFDSTVRLWDVD 433
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 73/317 (23%), Positives = 141/317 (44%)
Query: 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDI 98
+N ++ LD+ SE LL G S + F R+ W K+G+ + +LG G + ++
Sbjct: 224 SNKDVTSLDWNSEGT-LLATG---SYDGFARI-WTKDGNLAS--TLGQHKGPIF--ALK- 273
Query: 99 WNPL-SLISSGETGGNPLI--AHLSR-------HKGPVRGLEFNSFTPNLLASGADDGEI 148
WN + I S +I AH H P +++ S N AS + D +
Sbjct: 274 WNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQS--NNTFASCSTD--M 329
Query: 149 CIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP 208
CI + + +G+ + E++ + W+ ++LAS S + T +W +K+
Sbjct: 330 CI-HVCKLGQDRPIKTFQGHTN----EVNAIKWDP-TGNLLASCSDDMTLKIWSMKQDSC 383
Query: 209 VISFSESIKRRCSVLQWNP------DVATQLVVASDEDSS--PALRLWDMRNTMSPVKEF 260
V ++ + ++W+P + L++AS + +S +RLWD+ + +
Sbjct: 384 VHDL-QAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGIC-IHTL 441
Query: 261 VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIP 320
H + V ++++ P D YL + + D W+T +G +V GT F++ W
Sbjct: 442 TKHQEPVYSVAFSP-DGRYLASGSFDKCVHIWNTQTGALVHSY-RGTGGIFEVCWNAA-G 498
Query: 321 GVISASSFDGKIGIYNI 337
+ AS+ DG + + ++
Sbjct: 499 DKVGASASDGSVCVLDL 515
Score = 120 (47.3 bits), Expect = 0.00080, P = 0.00080
Identities = 46/176 (26%), Positives = 77/176 (43%)
Query: 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS 211
D+ P P+ LRG+ S E+ +WN V +LAS S + T +W+L + S
Sbjct: 154 DVEIP--PNKAVVLRGHES----EVFICAWNP-VSDLLASGSGDSTARIWNLSENSTSGS 206
Query: 212 FSESIKRRCSVLQWNPDVATQLVVAS-DEDSSPAL----------RLWDMRNTMSPVKEF 260
++ + R C + + DV + V S D +S L R+W ++
Sbjct: 207 -TQLVLRHC-IREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLAST--- 261
Query: 261 VGHTKG-VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHW 315
+G KG + A+ W +++L+ D TI WD +GE + P + D+ W
Sbjct: 262 LGQHKGPIFALKW-NKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 316
>TAIR|locus:2010356 [details] [associations]
symbol:ATAN11 "AT1G12910" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=NAS] [GO:0043153 "entrainment of circadian clock by
photoperiod" evidence=IEP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009718 GO:GO:0048511 GO:GO:0044212
EMBL:AC012187 GO:GO:0048573 GO:GO:0043153 eggNOG:NOG314410
OMA:NKVQIVS HOGENOM:HOG000260968 KO:K11805 UniGene:At.23958
EMBL:U94746 EMBL:AY093101 EMBL:AY128776 EMBL:AY087676
IPI:IPI00520024 PIR:G86262 RefSeq:NP_172751.1 UniGene:At.62609
ProteinModelPortal:Q9LPV9 SMR:Q9LPV9 STRING:Q9LPV9 PaxDb:Q9LPV9
PRIDE:Q9LPV9 EnsemblPlants:AT1G12910.1 GeneID:837849
KEGG:ath:AT1G12910 GeneFarm:2811 TAIR:At1g12910 InParanoid:Q9LPV9
PhylomeDB:Q9LPV9 ProtClustDB:CLSN2682478 Genevestigator:Q9LPV9
Uniprot:Q9LPV9
Length = 346
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 45/175 (25%), Positives = 75/175 (42%)
Query: 124 GPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNS 183
GP+ ++N P + + + D IWD+ A + A E+ ++W
Sbjct: 136 GPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQL-------IAHDKEVFDIAWGG 188
Query: 184 KVQHILASTSYNGTTVVWDLK-KQKPVISFSESIKRRCSV-LQWNPDVATQLVVASDEDS 241
+ AS S +G+ V+DL+ K+ I + S V L WN + DS
Sbjct: 189 V--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATII-MDS 245
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296
+ + L D+R PV E H V A++W P+ S ++ T D++ + WD S
Sbjct: 246 AKVVVL-DIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISS 299
>TAIR|locus:2119141 [details] [associations]
symbol:CDC20.2 "AT4G33260" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0033597 "mitotic checkpoint complex" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:AL035678 EMBL:AL161583
HSSP:P16649 GO:GO:0033597 KO:K03363 HOGENOM:HOG000195514
EMBL:AF029263 IPI:IPI00519553 PIR:T05977 RefSeq:NP_195052.1
UniGene:At.48930 ProteinModelPortal:Q9S7I8 SMR:Q9S7I8 STRING:Q9S7I8
EnsemblPlants:AT4G33260.1 GeneID:829462 KEGG:ath:AT4G33260
TAIR:At4g33260 InParanoid:Q9S7I8 OMA:AVALDNC PhylomeDB:Q9S7I8
ProtClustDB:CLSN2915879 ArrayExpress:Q9S7I8 Genevestigator:Q9S7I8
Uniprot:Q9S7I8
Length = 447
Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 51/235 (21%), Positives = 100/235 (42%)
Query: 80 EDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139
+DF L L+ G + + + TG + + KGPV + + ++
Sbjct: 129 DDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHV- 187
Query: 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTV 199
A G ++ E+ +WD A L+G Q + ++WN+ HIL + +G +
Sbjct: 188 AVGLNNSEVQLWD---SASNRQLRTLKGGH---QSRVGSLAWNN---HILTTGGMDGLII 238
Query: 200 VWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDM-----RNTM 254
D++ + P++ + L+W+ QL +++ + +WD +T
Sbjct: 239 NNDVRIRSPIVETYRGHTQEVCGLKWSGS-GQQLASGGNDN---VVHIWDRSVASSNSTT 294
Query: 255 SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD-NRTI-CWDTVSGEIVSELPAGT 307
+ HT V A++WCP ++ L T +RTI W+T +G ++ + G+
Sbjct: 295 QWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGS 349
>TAIR|locus:2119151 [details] [associations]
symbol:CDC20.1 "AT4G33270" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0033597 "mitotic checkpoint complex" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AL035678 EMBL:AL161583
HSSP:P16649 GO:GO:0033597 KO:K03363 OMA:DAGTYSI
ProtClustDB:CLSN2915879 EMBL:BT026138 IPI:IPI00524152 PIR:T05978
RefSeq:NP_195053.1 UniGene:At.368 SMR:Q9SZA4 IntAct:Q9SZA4
STRING:Q9SZA4 EnsemblPlants:AT4G33270.1 GeneID:829463
KEGG:ath:AT4G33270 TAIR:At4g33270 InParanoid:Q9SZA4
Genevestigator:Q9SZA4 Uniprot:Q9SZA4
Length = 457
Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 51/235 (21%), Positives = 100/235 (42%)
Query: 80 EDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139
+DF L L+ G + + + TG + + KGPV + + ++
Sbjct: 139 DDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHV- 197
Query: 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTV 199
A G ++ E+ +WD A L+G Q + ++WN+ HIL + +G +
Sbjct: 198 AVGLNNSEVQLWD---SASNRQLRTLKGGH---QSRVGSLAWNN---HILTTGGMDGLII 248
Query: 200 VWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDM-----RNTM 254
D++ + P++ + L+W+ QL +++ + +WD +T
Sbjct: 249 NNDVRIRSPIVETYRGHTQEVCGLKWSGS-GQQLASGGNDN---VVHIWDRSVASSNSTT 304
Query: 255 SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD-NRTI-CWDTVSGEIVSELPAGT 307
+ HT V A++WCP ++ L T +RTI W+T +G ++ + G+
Sbjct: 305 QWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGS 359
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 52/200 (26%), Positives = 90/200 (45%)
Query: 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195
P L+ +G+DDG + +WD+ A F ++ V++N I+ S +
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTY--------QVLAVTFNDTSDQII-SGGID 214
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
VWDL++ K + SV + ++++ D++ +R+WD+R +
Sbjct: 215 NDIKVWDLRQNKLTYTMRGHAD---SVTGLSLSSEGSYLLSNAMDNT--VRVWDVR-PFA 268
Query: 256 P----VKEFVGHT----KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT 307
P VK F G+ K ++ SW P D S + + D WDT S I+ +LP
Sbjct: 269 PKERCVKIFQGNVHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRILYKLPGHA 327
Query: 308 NWNFDIHWYPKIPGVISASS 327
++ ++P P +ISASS
Sbjct: 328 GSINEVAFHPDEPIIISASS 347
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 46/179 (25%), Positives = 85/179 (47%)
Query: 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEI 176
A L H G V L +N+ ++L S + D + +WD S E L+G+ S
Sbjct: 103 ATLKGHSGAVMELHYNT-DGSMLFSASTDKTVAVWD-SETGE--RVKRLKGHTSFVNS-- 156
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVA 236
+ + + ++ + S +GT +WD++K+ + +F + + + +N D + Q++
Sbjct: 157 CYPA--RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFN-DTSDQIISG 211
Query: 237 S-DEDSSPALRLWDMR-NTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
D D +++WD+R N ++ GH V +S ++ SYLL+ A DN WD
Sbjct: 212 GIDND----IKVWDLRQNKLTYTMR--GHADSVTGLS-LSSEGSYLLSNAMDNTVRVWD 263
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 146 (56.5 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 57/219 (26%), Positives = 109/219 (49%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H + L+++S ++ +GADDG+I +WD+++ F + SA G + F
Sbjct: 338 HYDALSTLQYSSDGQRII-TGADDGKIKVWDMNSGFCIVTFTQ---HTSAVSG-LCF--- 389
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
SK ++L S+S +G+ WDL + + +F+ + + S + +P + ++V A +DS
Sbjct: 390 -SKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDP--SGEIVCAGSQDS 446
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWDTVSGE-I 299
+W ++ T ++ GH V ++S+ N S LL ++T+ WD S I
Sbjct: 447 FEIF-MWSVQ-TGQLLETLAGHEGPVSSLSF--NSSGSLLASGSWDKTVRIWDIFSRSGI 502
Query: 300 VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
V LP ++ + ++P V AS DG++ +N++
Sbjct: 503 VEPLPIPSDV-LSLAFHPDGKEVCVAS-LDGQLTFWNVQ 539
>ASPGD|ASPL0000054968 [details] [associations]
symbol:AN1387 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319
EMBL:AACD01000019 HOGENOM:HOG000208957 KO:K12601 OMA:RNCVATH
OrthoDB:EOG4SJ8PN RefSeq:XP_658991.1 ProteinModelPortal:Q5BDJ3
EnsemblFungi:CADANIAT00001220 GeneID:2877164 KEGG:ani:AN1387.2
Uniprot:Q5BDJ3
Length = 306
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 64/277 (23%), Positives = 119/277 (42%)
Query: 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQ 173
PL+ L HK + ++ ++ G GE+ IW+ SH
Sbjct: 50 PLVQTLEAHKAGCHHVVTDAKGSRAVSVGFG-GEVVIWE-------SHEGTWSKTKDVVL 101
Query: 174 GEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQL 233
+I V+ ++ Q+ LA T+ +G VWD+ + I E+ + + +PD +
Sbjct: 102 ADIWAVALSADGQY-LAGTTQDGHVKVWDMNANEEEIRDHETKGSFGTCIDLSPD--GRF 158
Query: 234 VVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC-W 292
+ + E+ S + ++ P G K V ++++ P L A D+R I +
Sbjct: 159 IASGHENGS--VYIFSTETGRMPFS-LSGLVKPVRSVAFSPGGK--FLAAAGDSRVIVLY 213
Query: 293 DTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSA 352
DT SGE V+ L W + W ++S S FDGK+ +++I+ +R V + +
Sbjct: 214 DTTSGEQVASLTGHAAWILSLSWSNTGEYLLSGS-FDGKVKVWSID--TRNCVATHSETE 270
Query: 353 APLRAPKWYKRPAGASFGFG----GKLVSFHPKSSAG 385
+ + W + G S GF + +SF+ +++ G
Sbjct: 271 RAIWSVIWLPK-IGKSEGFATAGANRSISFYREATGG 306
>UNIPROTKB|Q6PAX7 [details] [associations]
symbol:wdr1-b "WD repeat-containing protein 1-B"
species:8355 "Xenopus laevis" [GO:0003779 "actin binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005884 "actin filament"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0030043 "actin filament fragmentation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0003779
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005884
GO:GO:0030043 HSSP:Q02793 HOVERGEN:HBG000780 EMBL:BC060007
RefSeq:NP_001083198.1 UniGene:Xl.4586 ProteinModelPortal:Q6PAX7
GeneID:398797 KEGG:xla:398797 CTD:398797 Xenbase:XB-GENE-865912
Uniprot:Q6PAX7
Length = 607
Score = 139 (54.0 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 70/304 (23%), Positives = 124/304 (40%)
Query: 15 FAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGK 74
+AP Y+A+G +G + + + ++ + K ++Q + + + S+R + G+
Sbjct: 66 YAPSGFYIASGDTSGKLRI-WDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 124
Query: 75 NGSGS-----EDFSLGLVAGGL-VDGSIDI--WNPLSLISSGETG------GNPLIAH-- 118
GS S+G + G + V S+DI P L++ + G P
Sbjct: 125 EKFGSVFLWDTGSSVGEIIGNIKVINSVDIKQTRPYRLVTGSDDNCCAFFEGPPFKFKFT 184
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
+S H V + F+ L ++GAD G+I ++D + G A G I
Sbjct: 185 MSDHSRFVNCVRFSPDGSRLASAGAD-GQIFLYDGKTGEKVCSL----GGSKAHDGGIYA 239
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF---SESIKRRCSVLQWNPDVATQLVV 235
VSW+ +L S S + T +WD+ V +F S+ + ++ L W D + +
Sbjct: 240 VSWSPDGTQLL-SASGDKTAKIWDVAANSAVTTFNLGSDVLDQQLGCL-WQKDYLLSVSL 297
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDS-SYLLTCAKDNRTICWDT 294
S + D N P + GH K + M+ +D S + T + D WD
Sbjct: 298 ------SGYINYLDKNNPAKPFRIIKGHNKSIQCMTVDKSDGRSTIYTGSHDGHINYWDA 351
Query: 295 VSGE 298
+GE
Sbjct: 352 ETGE 355
Score = 52 (23.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 321 GVISASSFDGKIGIYNIEGCS 341
G +S DGK+ +Y+I+G S
Sbjct: 458 GTVSVGGADGKVHLYSIQGNS 478
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 139 (54.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 51/205 (24%), Positives = 98/205 (47%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H G V ++FN ++ SG+ D + WD + +P P++ A G IS V
Sbjct: 108 HAGKVNTVQFNE-EATVILSGSIDSSVRCWDCRS-RKPE---PVQTLDEARDG-ISSVKV 161
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
+ H + + S +G +DL+ + FS+ + + ++ D Q + S DS
Sbjct: 162 SD---HEVLAGSVDGRVRRYDLRMGQ---LFSDYVGSPITCTCFSRD--GQCTLVSSLDS 213
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPND-SSYLLTCAKDNRTICWDTVSGEIV 300
+ LRL D ++T + E+ GH + C ++ +++++C++D + WD V G +V
Sbjct: 214 T--LRLLD-KDTGELLGEYTGHKNQEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGVLV 270
Query: 301 SELPAGTNWNFDIHWYPKIPGVISA 325
LP G + + ++P P +++A
Sbjct: 271 LALPVGPSVVQSLAYHPTEPCLLTA 295
>SGD|S000006168 [details] [associations]
symbol:YPL247C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000006168 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BK006949 EMBL:Z67751 eggNOG:NOG314410
HOGENOM:HOG000260968 KO:K11805 GeneTree:ENSGT00390000006939
OrthoDB:EOG48PQTZ EMBL:Z73603 PIR:S61017 RefSeq:NP_015077.1
ProteinModelPortal:Q12523 SMR:Q12523 DIP:DIP-6366N IntAct:Q12523
MINT:MINT-685692 STRING:Q12523 PaxDb:Q12523 PeptideAtlas:Q12523
PRIDE:Q12523 EnsemblFungi:YPL247C GeneID:855829 KEGG:sce:YPL247C
CYGD:YPL247c OMA:NTFPPVT NextBio:980386 Genevestigator:Q12523
GermOnline:YPL247C Uniprot:Q12523
Length = 523
Score = 143 (55.4 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 53/206 (25%), Positives = 90/206 (43%)
Query: 125 PVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK 184
P+ ++N+ NL+ S + D +WDL + SH+ ++ A E+ V + +K
Sbjct: 245 PITSFDWNTVDTNLIISSSIDTTCIVWDLQS----SHY--VKTQLIAHDSEVFDVRFLTK 298
Query: 185 VQHILASTSYNGTTVVWDLKK--------QKPVISFS--------ESIKRRCSVLQWNPD 228
+ AS +G+ V+DL+ + P S S S K ++L+ P
Sbjct: 299 STQLFASCGGDGSVRVFDLRSLAHSTIIYEPPSSSVSGATAGTITPSSKGSDALLRLEPS 358
Query: 229 VATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR 288
V+A+ S + + DMRN SP+ GH V + W P + LL+C D +
Sbjct: 359 PYDPNVLATFAADSNKIIILDMRNPESPILNLQGHGSSVNGIKWHPTKRNVLLSCGDDCQ 418
Query: 289 TICWDTVSGEIVSELPAGTNWNFDIH 314
+ WD S + E+ A + + IH
Sbjct: 419 VLYWDLNSSFM--EINAAGSKSPSIH 442
>MGI|MGI:2442115 [details] [associations]
symbol:Wdr59 "WD repeat domain 59" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006575 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50908 SMART:SM00320 SMART:SM00591
MGI:MGI:2442115 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GeneTree:ENSGT00650000093352
OMA:TGGWNIA CTD:79726 HOVERGEN:HBG092820 EMBL:EF011622
EMBL:AK173301 EMBL:AK030644 EMBL:AK040807 EMBL:AK052262
EMBL:AK136303 EMBL:AK170910 EMBL:BC066082 IPI:IPI00263940
IPI:IPI00469939 IPI:IPI00955111 RefSeq:NP_001164213.1
RefSeq:NP_001164214.1 RefSeq:NP_795897.2 UniGene:Mm.247294
ProteinModelPortal:Q8C0M0 SMR:Q8C0M0 PhosphoSite:Q8C0M0
PRIDE:Q8C0M0 Ensembl:ENSMUST00000038193 GeneID:319481
KEGG:mmu:319481 UCSC:uc009nmi.2 UCSC:uc009nmj.2 NextBio:394820
Bgee:Q8C0M0 CleanEx:MM_WDR59 Genevestigator:Q8C0M0 Uniprot:Q8C0M0
Length = 992
Score = 146 (56.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 107 SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166
SGE G L H + L++ F P+LL + + D I IWD+ +P+ L
Sbjct: 94 SGEVGTT-----LQGHTRVISDLDWAVFEPDLLVTSSVDTYIYIWDIKDTRKPT--VALS 146
Query: 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWN 226
A+Q V WN K + LA TS++G +WD +K + + + + L W+
Sbjct: 147 AVAGASQ-----VKWNKKNANYLA-TSHDGDVRIWDKRKPSTAVEYLAAHLSKIHGLDWH 200
Query: 227 PDVATQLVVASDEDSSPALRLWDMR 251
PD + + S +D+S ++ WD R
Sbjct: 201 PD-SEHIFATSSQDNS--VKFWDYR 222
Score = 134 (52.2 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 34/129 (26%), Positives = 57/129 (44%)
Query: 169 GSAAQGE---ISFVSWNSKVQHILASTSYNGTTVVWDLKK-QKPVISFSESIKRRCSVLQ 224
G+ QG IS + W +L ++S + +WD+K +KP ++ S S ++
Sbjct: 98 GTTLQGHTRVISDLDWAVFEPDLLVTSSVDTYIYIWDIKDTRKPTVALSAVAG--ASQVK 155
Query: 225 WNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA 284
WN A L + D D +R+WD R + V+ H + + W P+ T +
Sbjct: 156 WNKKNANYLATSHDGD----VRIWDKRKPSTAVEYLAAHLSKIHGLDWHPDSEHIFATSS 211
Query: 285 KDNRTICWD 293
+DN WD
Sbjct: 212 QDNSVKFWD 220
>TAIR|locus:505006640 [details] [associations]
symbol:AT5G27945 "AT5G27945" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005680 "anaphase-promoting complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 KO:K03363
IPI:IPI00534669 RefSeq:NP_568505.1 UniGene:At.55046
ProteinModelPortal:F4K5R6 SMR:F4K5R6 EnsemblPlants:AT5G27945.1
GeneID:832862 KEGG:ath:AT5G27945 PhylomeDB:F4K5R6 Uniprot:F4K5R6
Length = 428
Score = 141 (54.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 52/213 (24%), Positives = 95/213 (44%)
Query: 124 GPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNS 183
GPV + + +L A G D+ E+ +WD H LRG + G ++ WN+
Sbjct: 153 GPVTSINWTQDGLDL-AVGLDNSEVQVWDC---VSNRHVRTLRGGHESRVGSLA---WNN 205
Query: 184 KVQHILASTSYNGTTVVWDLKKQKPVI-SFSESIKRRCSVLQWNPDVATQLVVASDEDSS 242
HIL + +G V D++ + +I ++ + C L+W+ + +L +++
Sbjct: 206 ---HILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCG-LKWS-ESGKKLASGGNDN-- 258
Query: 243 PALRLWDMRNTMS-PVKE----FVGHTKGVIAMSWCPNDSSYLLTCAK--DNRTICWDTV 295
+ +WD S P ++ F HT V A++WCP +S L T D + W+T
Sbjct: 259 -VVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTH 317
Query: 296 SGEIVSELPAGTNWNFDIHWYPKIPGVISASSF 328
+G ++ + G+ + W ++SA F
Sbjct: 318 TGACLNSVETGSQV-CSLLWSKSERELLSAHGF 349
>UNIPROTKB|Q9W7F2 [details] [associations]
symbol:wdr1-a "WD repeat-containing protein 1-A"
species:8355 "Xenopus laevis" [GO:0003779 "actin binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005884 "actin filament"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030043 "actin filament fragmentation" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0003779
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011045 SUPFAM:SSF50974
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005884 GO:GO:0030043
EMBL:AF124140 EMBL:BC041232 EMBL:BC077202 RefSeq:NP_001081923.1
UniGene:Xl.524 ProteinModelPortal:Q9W7F2 GeneID:398123
KEGG:xla:398123 CTD:398123 Xenbase:XB-GENE-6251934
HOVERGEN:HBG000780 Uniprot:Q9W7F2
Length = 607
Score = 141 (54.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 73/309 (23%), Positives = 128/309 (41%)
Query: 11 ASVA-FAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNR 69
A VA +AP Y+A+G +G + + + ++ + K ++Q + + + S+R
Sbjct: 61 AVVARYAPSGFYIASGDTSGKLRI-WDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAV 119
Query: 70 LAWGKNGSGS-----EDFSLGLVAGGL-VDGSIDI--WNPLSLISSGETG------GNPL 115
+ G+ S S+G + G + V S+DI P L++ + G P
Sbjct: 120 VGEGREKFASVFLWDTGSSVGEITGNIKVINSVDIKQTRPYRLVTGSDDNCCAFLEGPPF 179
Query: 116 IAH--LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQ 173
+S H V + F+ L ++GAD G+I ++D + G A
Sbjct: 180 KFKFTMSDHSRFVNCVRFSPDGSKLASAGAD-GQIFLYDGKTGEKVCSL----GGSKAHD 234
Query: 174 GEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF---SESIKRRCSVLQWNPDVA 230
G I VSW+ +L S S + TT +WD+ V +F S+ + ++ L W D
Sbjct: 235 GGIYAVSWSPDGTQLL-SASGDKTTKIWDVAANSAVTTFNLGSDVLDQQLGCL-WQKDYL 292
Query: 231 TQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDS-SYLLTCAKDNRT 289
+ + S + D N P++ GH K + M+ +D S + T + D
Sbjct: 293 LSVSL------SGYINYLDKNNPARPLRVIKGHNKSIQCMTVNNSDGRSTIYTGSHDGHI 346
Query: 290 ICWDTVSGE 298
WD +GE
Sbjct: 347 NYWDAETGE 355
Score = 49 (22.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 321 GVISASSFDGKIGIYNIEGCS 341
G ++ DGK+ +Y+I+G S
Sbjct: 458 GTVAVGGADGKVHLYSIQGNS 478
>CGD|CAL0005349 [details] [associations]
symbol:HAT2 species:5476 "Candida albicans" [GO:0000123
"histone acetyltransferase complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA;IDA] [GO:0016573 "histone acetylation"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000221
"negative regulation of pseudohyphal growth" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:0006333 "chromatin assembly or disassembly"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 eggNOG:COG2319 GO:GO:0016568
KO:K10752 InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000162
EMBL:AACQ01000158 RefSeq:XP_712278.1 RefSeq:XP_712421.1
ProteinModelPortal:Q59RH5 STRING:Q59RH5 GeneID:3645973
GeneID:3646093 KEGG:cal:CaO19.2146 KEGG:cal:CaO19.9693
Uniprot:Q59RH5
Length = 382
Score = 140 (54.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 46/181 (25%), Positives = 80/181 (44%)
Query: 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEI 176
+H + H GL +N LL +GADD +C+ D + + F S Q +I
Sbjct: 137 SHFAPHTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTT--NKTTFK------SDIQKDI 188
Query: 177 -SFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVV 235
+ V W+ ++ AS S + ++D + K V + + L ++P A LV
Sbjct: 189 VNDVKWHQFNGNLFASVSEDSHVYLFDARDNKVVSQYYAESSNGINSLAFSP-FAENLVA 247
Query: 236 ASDEDSSPALRLWDMRN---TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
+ S+ + L D+R + +GH++G+ M + P+ L T ++D R I W
Sbjct: 248 IGNTSSN--INLLDLRKLGENSGLLHTMMGHSEGITCMEFSPHHDGILATGSQDRRIIIW 305
Query: 293 D 293
D
Sbjct: 306 D 306
>UNIPROTKB|Q59RH5 [details] [associations]
symbol:HAT2 "Histone acetyltransferase type B subunit 2"
species:237561 "Candida albicans SC5314" [GO:0005634 "nucleus"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:2000221 "negative regulation of pseudohyphal
growth" evidence=IMP] [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016568 KO:K10752 InterPro:IPR022052
Pfam:PF12265 EMBL:AACQ01000162 EMBL:AACQ01000158 RefSeq:XP_712278.1
RefSeq:XP_712421.1 ProteinModelPortal:Q59RH5 STRING:Q59RH5
GeneID:3645973 GeneID:3646093 KEGG:cal:CaO19.2146
KEGG:cal:CaO19.9693 Uniprot:Q59RH5
Length = 382
Score = 140 (54.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 46/181 (25%), Positives = 80/181 (44%)
Query: 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEI 176
+H + H GL +N LL +GADD +C+ D + + F S Q +I
Sbjct: 137 SHFAPHTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTT--NKTTFK------SDIQKDI 188
Query: 177 -SFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVV 235
+ V W+ ++ AS S + ++D + K V + + L ++P A LV
Sbjct: 189 VNDVKWHQFNGNLFASVSEDSHVYLFDARDNKVVSQYYAESSNGINSLAFSP-FAENLVA 247
Query: 236 ASDEDSSPALRLWDMRN---TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
+ S+ + L D+R + +GH++G+ M + P+ L T ++D R I W
Sbjct: 248 IGNTSSN--INLLDLRKLGENSGLLHTMMGHSEGITCMEFSPHHDGILATGSQDRRIIIW 305
Query: 293 D 293
D
Sbjct: 306 D 306
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 51/200 (25%), Positives = 91/200 (45%)
Query: 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195
P L+ +G+DDG + +WD+ A F ++ V++N I+ S +
Sbjct: 191 PQLVCTGSDDGTVKLWDIRKKAAVQTFQNTY--------QVLAVTFNDTSDQII-SGGID 241
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
VWDL++ K + SV + ++++ D++ +R+WD+R +
Sbjct: 242 NDIKVWDLRQNKLTYTMRGHAD---SVTGLSLSSEGSYLLSNAMDNT--VRIWDVR-PFA 295
Query: 256 P----VKEFVGHT----KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT 307
P VK F G+ K ++ SW P D S + + D WDT S I+ +LP
Sbjct: 296 PKERCVKIFQGNVHNFEKNLLRCSWSP-DGSKIAGGSADRFVYVWDTTSRRILYKLPGHA 354
Query: 308 NWNFDIHWYPKIPGVISASS 327
++ ++P+ P ++SASS
Sbjct: 355 GSVNELAFHPEEPIILSASS 374
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 145 (56.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 70/286 (24%), Positives = 126/286 (44%)
Query: 50 SEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGE 109
S DR +LL E + L+ G G+ D + + S D ++L S
Sbjct: 85 SMDRSILLWNTYGQCENYGILS-GHKGA-ILDLQWSRDSKTIFSASAD----MTLASWDI 138
Query: 110 TGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNG 169
G + ++ H+ + +E + +L S +DDG + IWD P + L
Sbjct: 139 ESGQRIRRYIG-HEEVINSVEISKRGQEMLVSASDDGTMGIWD---PRQKEAIDYLE--- 191
Query: 170 SAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDV 229
+ I+ V+ S+ + + S + VWD++K+ V S + + S L+ +PD
Sbjct: 192 --TELPITAVA-QSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITS-LEVSPD- 246
Query: 230 ATQLVVASDEDSSPALRLWDMRN---TMSPVKEF----VGHTKGVIAMSWCPNDSSYLLT 282
+Q ++++ DS+ +R WD+R T ++ + VG K +I SW P +
Sbjct: 247 -SQTLLSNSFDST--VRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDK-IAA 302
Query: 283 CAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKI-PGVISASS 327
+ D + WD +G+I+ +LP D+ + P P ++SASS
Sbjct: 303 GSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASS 348
Score = 37 (18.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 12 SVAFAPDAPYMAAGTM 27
+V F P A ++A+G+M
Sbjct: 71 AVRFDPTAQHIASGSM 86
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 51/205 (24%), Positives = 97/205 (47%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H G V ++FN ++ SG+ D I WD + +P P++ A G IS V
Sbjct: 108 HAGKVNTVQFNE-EATVILSGSIDSTIRCWDCRS-RKPE---PVQTLDEARDG-ISSVKV 161
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
+ H + + S +G +DL+ + FS+ + + + ++ D Q + S DS
Sbjct: 162 SD---HEVLAGSVDGRVRRYDLRMGQ---LFSDYVGSPITCICFSRD--GQCTLVSSLDS 213
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPND-SSYLLTCAKDNRTICWDTVSGEIV 300
+ LRL D ++T + E+ GH + C ++ +++++C++D + WD V G +
Sbjct: 214 T--LRLLD-KDTGELLGEYTGHKNKEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALA 270
Query: 301 SELPAGTNWNFDIHWYPKIPGVISA 325
LP G + ++P P +++A
Sbjct: 271 LALPVGPGVVQSLTYHPTEPCLLTA 295
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 142 (55.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 51/219 (23%), Positives = 101/219 (46%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H GPV G F+ N L S ++DG + +W L F L G +G ++ W
Sbjct: 302 HSGPVYGASFSP-DRNYLLSSSEDGTVRLWSLQT------FTCLVGY----KGH-NYPVW 349
Query: 182 NSKVQ---HILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVAS 237
+++ + S ++ +W +P+ F+ + C+ +++P+ + V
Sbjct: 350 DTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT--RFHPN--SNYVATG 405
Query: 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297
D + +RLWD+ N + V+ F GH + ++++ PN +L T A D R + WD G
Sbjct: 406 SADRT--VRLWDVLNG-NCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWDIGHG 461
Query: 298 EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336
+V EL T+ + + + ++++ S D + +++
Sbjct: 462 LMVGELKGHTDTVCSLR-FSRDGEILASGSMDNTVRLWD 499
>POMBASE|SPBC577.09 [details] [associations]
symbol:ckn1 "ERCC-8 DNA repair homolog" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP] [GO:0070912 "Ddb1-Ckn1
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC577.09 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006283
PIR:T40553 RefSeq:NP_595307.1 ProteinModelPortal:Q9USR0
STRING:Q9USR0 EnsemblFungi:SPBC577.09.1 GeneID:2540861
KEGG:spo:SPBC577.09 HOGENOM:HOG000248233 KO:K10570 OMA:KIWDTNE
OrthoDB:EOG4BS0W2 NextBio:20801977 GO:GO:0070912 Uniprot:Q9USR0
Length = 404
Score = 140 (54.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 48/191 (25%), Positives = 82/191 (42%)
Query: 113 NPLIAHLSRHK----GPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGN 168
NP + RH G V L ++ L+ SG + I +WDL + +
Sbjct: 33 NPDVKIKRRHGAGILGSVNALSIDNTIHQLMVSGGANSSINVWDLQNIDQKEDEDLILDT 92
Query: 169 GSAAQGEISF------VSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSV 222
+A S + W I S+S++ T VWD+ + +F+ ++
Sbjct: 93 LNAVPARTSHKFGITDLHWFPFDNGIFTSSSFDHTLKVWDVSTLQEAYTFT--MEDMIYS 150
Query: 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLT 282
W+P +A+ ++A+ SS ++RL DM++ S GHT V+A+ WCP + L +
Sbjct: 151 HAWSP-IASHCLIATAYRSS-SIRLCDMQSG-SYTHSLSGHTGNVLAVDWCPKNEFVLAS 207
Query: 283 CAKDNRTICWD 293
+ D WD
Sbjct: 208 GSADGTCRLWD 218
Score = 121 (47.7 bits), Expect = 0.00042, P = 0.00042
Identities = 57/232 (24%), Positives = 96/232 (41%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGG------NPLIAHLSRHKGPVRGLEFNSFTPNLL 139
+V+GG + SI++W+ L I E N + A S HK + L + F +
Sbjct: 63 MVSGG-ANSSINVWD-LQNIDQKEDEDLILDTLNAVPARTS-HKFGITDLHWFPFDNGIF 119
Query: 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTV 199
S + D + +WD+S E F + I +W+ H L +T+Y +++
Sbjct: 120 TSSSFDHTLKVWDVSTLQEAYTF--------TMEDMIYSHAWSPIASHCLIATAYRSSSI 171
Query: 200 -VWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS--- 255
+ D++ S S +V W P + V+AS + RLWD+R S
Sbjct: 172 RLCDMQSGSYTHSLSGHTGNVLAV-DWCPK--NEFVLASGS-ADGTCRLWDIRKVSSSFA 227
Query: 256 ---------PVKEF-VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297
P + + H V ++W +D+ YL +C D+R W+ SG
Sbjct: 228 CMDLHNKYLPSNQTNISHYGTVNGLAWT-SDARYLASCGTDDRIRVWNMESG 278
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 139 (54.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 50/200 (25%), Positives = 90/200 (45%)
Query: 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195
P L+ +G+DDG + +WD+ A F ++ V++N I+ S +
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAVQTFQNTY--------QVLAVTFNDTSDQII-SGGID 215
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
VWDL++ K + SV + ++++ D++ +R+WD+R +
Sbjct: 216 NDIKVWDLRQNKLTYTMRGHAD---SVTGLSLSSEGSYLLSNAMDNT--VRVWDVR-PFA 269
Query: 256 P----VKEFVGHT----KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT 307
P VK F G+ K ++ SW P D S + + D WDT S ++ +LP
Sbjct: 270 PKERCVKIFQGNVHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRVLYKLPGHA 328
Query: 308 NWNFDIHWYPKIPGVISASS 327
++ ++P P ++SASS
Sbjct: 329 GSINEVAFHPDEPIILSASS 348
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 47/179 (26%), Positives = 85/179 (47%)
Query: 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEI 176
A L H G V L +N+ ++L S + D + +WD S E L+G+ S
Sbjct: 104 ATLKGHSGAVMELHYNT-DGSMLFSASTDKTVAVWD-SETGE--RVKRLKGHTSFVNS-- 157
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVA 236
+ + + ++ + S +GT +WD++K+ V +F + + + +N D + Q++
Sbjct: 158 CYPA--RRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQ--VLAVTFN-DTSDQIISG 212
Query: 237 S-DEDSSPALRLWDMR-NTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
D D +++WD+R N ++ GH V +S ++ SYLL+ A DN WD
Sbjct: 213 GIDND----IKVWDLRQNKLTYTMR--GHADSVTGLS-LSSEGSYLLSNAMDNTVRVWD 264
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 139 (54.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 51/200 (25%), Positives = 90/200 (45%)
Query: 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195
P L+ +G+DDG + +WD+ A F ++ V++N I+ S +
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTY--------QVLAVTFNDTSDQII-SGGID 215
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
VWDL++ K + SV + ++++ D++ +R+WD+R +
Sbjct: 216 NDIKVWDLRQNKLTYTMRGHAD---SVTGLSLSSEGSYLLSNAMDNT--VRVWDVR-PFA 269
Query: 256 P----VKEFVGHT----KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT 307
P VK F G+ K ++ SW P D S + + D WDT S I+ +LP
Sbjct: 270 PKERCVKIFQGNVHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRILYKLPGHA 328
Query: 308 NWNFDIHWYPKIPGVISASS 327
++ ++P P ++SASS
Sbjct: 329 GSINEVAFHPDEPIILSASS 348
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 46/179 (25%), Positives = 85/179 (47%)
Query: 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEI 176
A L H G V L +N+ ++L S + D + +WD S E L+G+ S
Sbjct: 104 ATLKGHSGAVMELHYNT-DGSMLFSASTDKTVAVWD-SETGE--RVKRLKGHTSFVNS-- 157
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVA 236
+ + + ++ + S +GT +WD++K+ + +F + + + +N D + Q++
Sbjct: 158 CYPA--RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFN-DTSDQIISG 212
Query: 237 S-DEDSSPALRLWDMR-NTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
D D +++WD+R N ++ GH V +S ++ SYLL+ A DN WD
Sbjct: 213 GIDND----IKVWDLRQNKLTYTMR--GHADSVTGLS-LSSEGSYLLSNAMDNTVRVWD 264
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 139 (54.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 51/200 (25%), Positives = 90/200 (45%)
Query: 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195
P L+ +G+DDG + +WD+ A F ++ V++N I+ S +
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTY--------QVLAVTFNDTSDQII-SGGID 215
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
VWDL++ K + SV + ++++ D++ +R+WD+R +
Sbjct: 216 NDIKVWDLRQNKLTYTMRGHAD---SVTGLSLSSEGSYLLSNAMDNT--VRVWDVR-PFA 269
Query: 256 P----VKEFVGHT----KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT 307
P VK F G+ K ++ SW P D S + + D WDT S I+ +LP
Sbjct: 270 PKERCVKIFQGNVHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRILYKLPGHA 328
Query: 308 NWNFDIHWYPKIPGVISASS 327
++ ++P P ++SASS
Sbjct: 329 GSINEVAFHPDEPIILSASS 348
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 46/179 (25%), Positives = 85/179 (47%)
Query: 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEI 176
A L H G V L +N+ ++L S + D + +WD S E L+G+ S
Sbjct: 104 ATLKGHSGAVMELHYNT-DGSMLFSASTDKTVAVWD-SETGE--RVKRLKGHTSFVNS-- 157
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVA 236
+ + + ++ + S +GT +WD++K+ + +F + + + +N D + Q++
Sbjct: 158 CYPA--RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFN-DTSDQIISG 212
Query: 237 S-DEDSSPALRLWDMR-NTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
D D +++WD+R N ++ GH V +S ++ SYLL+ A DN WD
Sbjct: 213 GIDND----IKVWDLRQNKLTYTMR--GHADSVTGLS-LSSEGSYLLSNAMDNTVRVWD 264
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 138 (53.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 47/175 (26%), Positives = 87/175 (49%)
Query: 188 ILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT----QLVVASDEDSSP 243
I+ + S + + ++W L K S+ + +R + DV Q ++ D
Sbjct: 30 IIVTASRDKSIILWKLTKDDK--SYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE- 86
Query: 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWDTVSGEI--- 299
LRLWD+ T + FVGHTK V+++++ D+ +++ ++D RTI W+T+ GE
Sbjct: 87 -LRLWDLA-TGETTRRFVGHTKDVLSVAFS-TDNRQIVSASRD-RTIKLWNTL-GECKYT 141
Query: 300 VSELPAGTNWNFDIHWYPK--IPGVISASSFDGKIGIYNIEGCSRYG--VGDSNF 350
+SE W + + P +P ++SAS +D + ++N++ C VG S +
Sbjct: 142 ISEGDGHKEWVSCVRFSPNTLVPTIVSAS-WDKTVKVWNLQNCKLRNSLVGHSGY 195
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 41/168 (24%), Positives = 83/168 (49%)
Query: 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVV 200
SG+ DGE+ +WDL+ F G+ ++ V++++ + I+ S S + T +
Sbjct: 80 SGSWDGELRLWDLATGETTRRFV---GHTK----DVLSVAFSTDNRQIV-SASRDRTIKL 131
Query: 201 WD-LKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE 259
W+ L + K IS + K S ++++P+ +V++ D + +++W+++N
Sbjct: 132 WNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKT--VKVWNLQNCKLR-NS 188
Query: 260 FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT 307
VGH+ + ++ P D S + KD + WD G+ + L AG+
Sbjct: 189 LVGHSGYLNTVAVSP-DGSLCASGGKDGVILLWDLAEGKKLYSLEAGS 235
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 126 (49.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 53/221 (23%), Positives = 98/221 (44%)
Query: 117 AHL-SRHKGP-VRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQG 174
AH+ S HK +RGL F T A+ +DDG +WD + E LRG+G+
Sbjct: 209 AHMFSAHKDEAIRGLAFAP-TDVKFATASDDGTARVWDFARYTEER---VLRGHGA---- 260
Query: 175 EISFVSWNSKVQHILASTSYNGTTVV--WDLKKQKPVISFSESIKRRCSVLQWNPDVATQ 232
E+ + W+ + ++A+ S + V WD K + + E K +++N +
Sbjct: 261 EVRCIDWHP-TKGLIATGSRDTQQPVKIWDPKSGSCLATLQEH-KSSVMAVEFNKNGNWL 318
Query: 233 LVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
L D ++++D+R M ++ + H K VI+++W P ++ D + W
Sbjct: 319 LTGGRDH----LVKMYDIR-MMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYW 373
Query: 293 DTVSGE----IVSELPAGTNWNFDIHWYPKIPGVISASSFD 329
V GE ++ W+ + W+P + +++ S D
Sbjct: 374 -MVDGEKEIGLLEHAHDQAIWS--MKWHP-LGHILATGSND 410
Score = 121 (47.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 59/276 (21%), Positives = 113/276 (40%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H +R L++ S L S G + W + +H + A +G ++F
Sbjct: 171 LQAHDSAIRALKWAS-NEQWLLSADQGGYVKYWQPNM--NNAHMFSAHKD-EAIRG-LAF 225
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKK--QKPVISFSESIKRRCSVLQWNPDVATQLVVA 236
+ K A+ S +GT VWD + ++ V+ + RC + W+P L+
Sbjct: 226 APTDVK----FATASDDGTARVWDFARYTEERVLR-GHGAEVRC--IDWHPTKG--LIAT 276
Query: 237 SDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296
D+ +++WD ++ S + H V+A+ + N ++LLT +D+ +D
Sbjct: 277 GSRDTQQPVKIWDPKSG-SCLATLQEHKSSVMAVEFNKN-GNWLLTGGRDHLVKMYDIRM 334
Query: 297 GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLR 356
+ + A + W+P G+ + DG I + ++G G+ + A +
Sbjct: 335 MKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQA-IW 393
Query: 357 APKWYKRPAG--ASFGFGGKLVSFHPKSSAGHTSEN 390
+ KW+ P G + G F ++ G T E+
Sbjct: 394 SMKWH--PLGHILATGSNDNNTKFWARNRPGDTVED 427
Score = 67 (28.6 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 41/150 (27%), Positives = 63/150 (42%)
Query: 427 PGGTYGDNYQQPLGPYSNGRG--YGASAAYQ-PAPQPGLFIPPQATQPNFTAPAPAP-VT 482
P G+YG P G Y G+G G+ A+ Q P P+ IP TAP+ + T
Sbjct: 636 PQGSYGGQ-GPPQGSYG-GQGTLQGSYASQQGPPPRQIQHIPSDIDYR--TAPSSSNGST 691
Query: 483 SQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDARGSLPSQIGAVP 542
MR +P+ PP E ++ P S + S +P PP++ R P +
Sbjct: 692 GDVDMRTMVPNQPPS-GEPEHWRGPPPVS--HQQQSQQQHP-PPINMQRMD-PRR----- 741
Query: 543 GPKMPNVVAPTPTPTGFMPMSGSGVVQRPG 572
P+M + + +P+G P Q+ G
Sbjct: 742 DPRMLSGRSDQLSPSGPPPQQQQSSAQQGG 771
Score = 54 (24.1 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 41/148 (27%), Positives = 54/148 (36%)
Query: 424 QSVPGGTYGDNYQQPLGPYSNGRGY-GASAAYQPAPQPGLFIPPQATQPNFTAPAPAPVT 482
+ G +G + + LGP + G G S QP PQ +PP Q P P
Sbjct: 554 EDAEGAQFGPS-KSFLGPPTTGGSLLGPS---QPRPQEFRSVPPPQQQQG---PPPNWRH 606
Query: 483 SQPAMR-PFIPSTPPVLRNAEQ--YQQPT-LGSQLYPGVSNPGYPVPPVSDARGSLPSQI 538
P M P PP Q +Q+P GS Y G P +GS SQ
Sbjct: 607 QGPPMSGPGQGYGPPGRMGGNQGGWQRPPPQGS--YGGQGPPQGSYGGQGTLQGSYASQQ 664
Query: 539 GAVPGPKMPNVVAPTPTPTGFMPMSGSG 566
G P P+ + P+ P S +G
Sbjct: 665 G--PPPRQIQHI-PSDIDYRTAPSSSNG 689
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 141 (54.7 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 51/213 (23%), Positives = 94/213 (44%)
Query: 125 PVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK 184
PV EF++ + +++ +G G + +W A+ F A+ + N
Sbjct: 206 PVAFCEFSADSEHIVTAGWS-GSVAVWKREQCAQEIKFIGHSSQAGCARFHPGAFTQNDY 264
Query: 185 VQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244
+ S SY+GT ++W L ++ P+ E +R S + ++P+ L A DS+
Sbjct: 265 SSLNVVSCSYDGTVLLWSLSQESPIGEL-EQHPQRVSKVAFHPN-GHHLATACF-DST-- 319
Query: 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP 304
R++D+ T + GH+K V +++ P D S LT D WD +G + L
Sbjct: 320 WRMYDL-TTKKELLYQEGHSKSVADVAFHP-DGSVALTGGHDCYGRVWDMRTGRCIMFLD 377
Query: 305 AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
T + W P +I+ SS D + ++++
Sbjct: 378 GHTKEIHSVEWMPNGYEMITGSS-DNSMKVWDL 409
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 44/177 (24%), Positives = 81/177 (45%)
Query: 132 NSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILAS 191
N ++ + S + DG + +W LS + P+ G +S V+++ H LA+
Sbjct: 262 NDYSSLNVVSCSYDGTVLLWSLSQES------PI-GELEQHPQRVSKVAFHPNGHH-LAT 313
Query: 192 TSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR 251
++ T ++DL +K ++ + E + + + ++PD + L D R+WDMR
Sbjct: 314 ACFDSTWRMYDLTTKKELL-YQEGHSKSVADVAFHPDGSVALTGGHDCYG----RVWDMR 368
Query: 252 NTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTN 308
T + GHTK + ++ W PN ++T + DN WD +PA T+
Sbjct: 369 -TGRCIMFLDGHTKEIHSVEWMPNGYE-MITGSSDNSMKVWDLRMRRNTYTMPAHTS 423
>TAIR|locus:2122133 [details] [associations]
symbol:AT4G35370 "AT4G35370" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00522472
RefSeq:NP_195263.4 UniGene:At.54614 ProteinModelPortal:F4JN04
SMR:F4JN04 PRIDE:F4JN04 EnsemblPlants:AT4G35370.1 GeneID:829690
KEGG:ath:AT4G35370 OMA:FRNIVAS Uniprot:F4JN04
Length = 433
Score = 140 (54.3 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 75/311 (24%), Positives = 140/311 (45%)
Query: 41 LEIFKLDFQSED---RDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSID 97
LE++ + +SE+ R+ +++ E P + L G G +F VA G ++ SI+
Sbjct: 141 LEVYVYE-ESENIYLRNDMIISELPLCTAW--LDCPLKGGGKGNF----VAIGTMESSIE 193
Query: 98 IWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPA 157
IW+ L L+ + T + H GPV L +N N++ASG++D ++ +WD++
Sbjct: 194 IWD-LDLVCTCATLCTT--GTDNSHTGPVIDLAWNKEFRNIVASGSEDKKVKVWDVATGK 250
Query: 158 EPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS-FSESI 216
+ + ++ V+WN+ +L S S + T V+ D + P S S
Sbjct: 251 -------CKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKD--GRDPSNSGLKWST 301
Query: 217 KRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR-NTMSPVKEFVGHTKGVIAMSWCPN 275
+ + L W+P VV S +D + ++ +D R + +SP H V ++S+ +
Sbjct: 302 EAKVEKLAWDPHSEHSFVV-SLKDGT--VKGFDTRASDLSPSFIIHAHDSEVSSISYNIH 358
Query: 276 DSSYLLTCAKDNRTICWDTVSGE---IVSELP-AGTNWNFDIHWYPKIPGVISASSFDG- 330
+ L T + D WD + + I + P AG F + + P +++ +G
Sbjct: 359 APNLLATGSADESVKLWDLSNNQPSWIATNKPNAGEV--FSVSFSADCPFLLAVGGSEGL 416
Query: 331 KIGI-YNIEGC 340
+ + Y I C
Sbjct: 417 NVSVGYLIRHC 427
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 140 (54.3 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 52/245 (21%), Positives = 100/245 (40%)
Query: 102 LSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSH 161
+S E PL + + H ++++ P + SG I +W+ P E
Sbjct: 205 MSAFIKQEKEATPLFS-FAGHMSEGFAIDWSPKVPGRMVSGDCKKNIHVWE---PQEGGT 260
Query: 162 FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ-KPVISFSESIKRRC 220
+ + S+ + + W+ + AS S + + +WD++ ++S +E+
Sbjct: 261 WKIDQRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSMLSANEAHSSDV 320
Query: 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYL 280
+V+ WN +++ +D + + PV F H+ V ++ W P DSS
Sbjct: 321 NVISWNR--TEPFILSGGDDGLLKVWDLRQFQSGRPVASFKQHSAPVTSVQWSPVDSSVF 378
Query: 281 LTCAKDNRTICWDT------VSG--EIVSELPA-------GTNWNFDIHWYPKIPGVISA 325
D+ WD + G E V +LP G ++HW+P+IPGV+ +
Sbjct: 379 AASGADDVISQWDLSVESCDMGGQAEDVKQLPPQLLFLHQGQKEVKELHWHPQIPGVLIS 438
Query: 326 SSFDG 330
++ G
Sbjct: 439 TALSG 443
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 137 (53.3 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 52/205 (25%), Positives = 95/205 (46%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H G V ++FN ++ SG+ D I WD + P P++ A G IS V
Sbjct: 108 HAGKVNTVQFNE-EATVILSGSIDSSIRCWDCRS-RRPE---PVQTLDEARDG-ISSVKV 161
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
+ H + S S +G +DL+ + FS+ + + ++ D Q + S DS
Sbjct: 162 SD---HEVLSGSVDGRVRRYDLRMGQ---LFSDYVGSPITCTCFSRD--GQCTLVSSLDS 213
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPND-SSYLLTCAKDNRTICWDTVSGEIV 300
+ LRL D ++T + E+ GH + C ++ +++++C++D + WD V G +
Sbjct: 214 T--LRLLD-KDTGELLGEYTGHKNQEYKLDCCLSERDTHVVSCSEDGKVYFWDLVEGALA 270
Query: 301 SELPAGTNWNFDIHWYPKIPGVISA 325
LP G + ++P P +++A
Sbjct: 271 LALPVGPGVVQSLAYHPTEPCLLTA 295
>TAIR|locus:2144372 [details] [associations]
symbol:CDC20.3 "AT5G27080" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 KO:K03363 IPI:IPI00540613 RefSeq:NP_198060.1
UniGene:At.51416 ProteinModelPortal:F4K2T7 SMR:F4K2T7 PRIDE:F4K2T7
EnsemblPlants:AT5G27080.1 GeneID:832766 KEGG:ath:AT5G27080
OMA:IREEVHE ArrayExpress:F4K2T7 Uniprot:F4K2T7
Length = 466
Score = 140 (54.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 61/261 (23%), Positives = 120/261 (45%)
Query: 80 EDFSLGLVAGGLVDG-SIDIWNPLSL--ISSGETGGNPLIAHLSRHKGPVRGLEFNSFTP 136
+DF L L+ G + +I + + + L SSG T + L+ + KGPV + +
Sbjct: 122 DDFYLNLLDWGSANVLAIALGDTVYLWDASSGST--SELVT-IDEDKGPVTSINWTQDGL 178
Query: 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG 196
+L A G D+ E+ +WD + + L G + G ++ WN+ HIL + +G
Sbjct: 179 DL-AVGLDNSEVQLWDFVSNRQVR---TLIGGHESRVGSLA---WNN---HILTTGGMDG 228
Query: 197 TTVVWDLKKQKPVI-SFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
V D++ + ++ ++ + C L+W+ + +L + + + +WD R+ S
Sbjct: 229 KIVNNDVRIRSSIVGTYLGHTEEVCG-LKWS-ESGKKLASGGNYN---VVHIWDHRSVAS 283
Query: 256 --PVKE----FVGHTKGVIAMSWCPNDSSYLLTCAK--DNRTICWDTVSGEIVSELPAGT 307
P ++ F HT V A++WCP ++ L T D + W+T +G ++ + G+
Sbjct: 284 SKPTRQWLHRFEEHTAAVRALAWCPFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGS 343
Query: 308 NWNFDIHWYPKIPGVISASSF 328
+ W + ++S+ F
Sbjct: 344 QV-CSLLWSQRERELLSSHGF 363
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 137 (53.3 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 37/129 (28%), Positives = 64/129 (49%)
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQK-PVISFSESIKRRCSVLQWNPDVATQLVVAS 237
V+W+ +H+L ++S +G+ +WD+ K K P+ + E + SV W+ QLVV+
Sbjct: 71 VTWSENNEHVLITSSGDGSLQIWDIAKPKGPLQVYKEHTQEAYSV-DWSQTRGEQLVVSG 129
Query: 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMS-WCPNDSSYLLTCAKDNRTICWDTVS 296
D + +LWD S ++ F GH +GVI + W P+ + + D WD +
Sbjct: 130 SWDQTA--KLWDPAVGKS-LRTFKGH-EGVIYSTIWSPHIPGCFASASGDQTLRIWDVKA 185
Query: 297 GEIVSELPA 305
+ +PA
Sbjct: 186 PGVRLVIPA 194
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 93 DGSIDI-W---NPLSLI-SSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGE 147
DG D+ W N LI SSG+ G+ I +++ KGP++ + ++ + GE
Sbjct: 66 DGLFDVTWSENNEHVLITSSGD--GSLQIWDIAKPKGPLQVYKEHTQEAYSVDWSQTRGE 123
Query: 148 ICI----WDLSAPA-EPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWD 202
+ WD +A +P+ LR +G I W+ + AS S + T +WD
Sbjct: 124 QLVVSGSWDQTAKLWDPAVGKSLR-TFKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWD 182
Query: 203 LKKQ--KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF 260
+K + VI ++ C +++ + L+V D S L+ WD+RN PV
Sbjct: 183 VKAPGVRLVIPAHQAEILSCDWCKYDEN----LLVTGAVDCS--LKGWDLRNVRQPVFIL 236
Query: 261 VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
+GHT V + + P ++ L +C+ D WD
Sbjct: 237 LGHTYAVRRVKFSPFHATLLASCSYDFTVRFWD 269
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 125 (49.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 50/211 (23%), Positives = 91/211 (43%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
HK +R F+ T N A+ +DDG + IWD E LRG+G+ ++ V W
Sbjct: 201 HKEAIREASFSP-TDNKFATCSDDGTVRIWDFLRCHEERI---LRGHGA----DVKCVDW 252
Query: 182 NSKVQHILASTSYNGTTVV--WDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDE 239
+ + ++ S S + + WD K + + + + K ++ N + L+ AS +
Sbjct: 253 HP-TKGLVVSGSKDSQQPIKFWDPKTGQSLATL-HAHKNTVMEVKLNLN-GNWLLTASRD 309
Query: 240 DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDT-VSGE 298
+L+D+RN ++ F GH K A++W P + D + W V E
Sbjct: 310 H---LCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKE 366
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFD 329
+ A + + W+P + ++ + S D
Sbjct: 367 VGGMEMAHEGMIWSLAWHP-LGHILCSGSND 396
Score = 72 (30.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 47/183 (25%), Positives = 64/183 (34%)
Query: 405 GMVDSSQQYYQEP---VQSPLH--QSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQ 459
G + Q +Q+P Q P++ Q P G G ++ P GP G +Q
Sbjct: 592 GPMSQIPQGFQQPHPSQQMPMNMAQMGPPGPQGQ-FRPP-GPQGQ-MGPQGPPLHQGGGG 648
Query: 460 PGLFIPPQATQ-PNFTAPAPAPVTSQPAMR-------PFIPSTPPVLRNAEQYQQPTLGS 511
P F+ PQ Q P P P + M+ P P PP + + Q +G
Sbjct: 649 PQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSG-PQGHMGP 707
Query: 512 QLYPGVSN---PGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVV 568
Q PG P P P P + GP P + P P G GS +
Sbjct: 708 QGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGI 767
Query: 569 QRP 571
Q P
Sbjct: 768 QGP 770
Score = 68 (29.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 50/173 (28%), Positives = 60/173 (34%)
Query: 417 PVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAP 476
P Q P+ Q +P G +QQP P S + P PQ G F PP Q
Sbjct: 589 PGQGPMSQ-IPQG-----FQQP-HP-SQQMPMNMAQMGPPGPQ-GQFRPP-GPQGQMGPQ 638
Query: 477 APAPVTS-----QPAMRPFIPSTPPV-LRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDA 530
P P+ Q M P P PP L + P G Q +PG P P P
Sbjct: 639 GP-PLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQ-GMQRHPGPHGPLGPQGPPGPQ 696
Query: 531 RGSLPSQIGAVPGPKMPNV-VAPT--PTPTGFM----PMSGSGVVQRPGMGSM 576
S P GP P + P P P G + P G+ PG M
Sbjct: 697 GSSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGM 749
Score = 67 (28.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 39/140 (27%), Positives = 50/140 (35%)
Query: 412 QYYQEPV-QSPLHQSVPGGTYGD-NYQQPLGPYSNGR--GYGASAAYQPAPQPGLFI--P 465
Q Q PV Q PL P G G ++ GP G G+ P P GL P
Sbjct: 765 QGIQGPVSQGPLMGLNPRGMQGPPGPRENQGPAPQGMMMGHPPQEMRGPHPPSGLLGHGP 824
Query: 466 PQATQPNFTAPAPAPVTSQPAMRPFIPST---PPVLRNAEQYQQPTLGSQLYPGVSNPGY 522
+ P P + P P PP + + Q +LG G+ P
Sbjct: 825 QEMRGPQEMRGMQGPPAQGSMLGP--PQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPG 882
Query: 523 PVPPVSDARGSLPSQIGAVP 542
P + ARG PSQ G +P
Sbjct: 883 PQGQQNPARGPHPSQ-GPIP 901
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 125 (49.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 50/211 (23%), Positives = 91/211 (43%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
HK +R F+ T N A+ +DDG + IWD E LRG+G+ ++ V W
Sbjct: 201 HKEAIREASFSP-TDNKFATCSDDGTVRIWDFLRCHEERI---LRGHGA----DVKCVDW 252
Query: 182 NSKVQHILASTSYNGTTVV--WDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDE 239
+ + ++ S S + + WD K + + + + K ++ N + L+ AS +
Sbjct: 253 HP-TKGLVVSGSKDSQQPIKFWDPKTGQSLATL-HAHKNTVMEVKLNLN-GNWLLTASRD 309
Query: 240 DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDT-VSGE 298
+L+D+RN ++ F GH K A++W P + D + W V E
Sbjct: 310 H---LCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKE 366
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFD 329
+ A + + W+P + ++ + S D
Sbjct: 367 VGGMEMAHEGMIWSLAWHP-LGHILCSGSND 396
Score = 72 (30.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 47/183 (25%), Positives = 64/183 (34%)
Query: 405 GMVDSSQQYYQEP---VQSPLH--QSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQ 459
G + Q +Q+P Q P++ Q P G G ++ P GP G +Q
Sbjct: 592 GPMSQIPQGFQQPHPSQQMPMNMAQMGPPGPQGQ-FRPP-GPQGQ-MGPQGPPLHQGGGG 648
Query: 460 PGLFIPPQATQ-PNFTAPAPAPVTSQPAMR-------PFIPSTPPVLRNAEQYQQPTLGS 511
P F+ PQ Q P P P + M+ P P PP + + Q +G
Sbjct: 649 PQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSG-PQGHMGP 707
Query: 512 QLYPGVSN---PGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVV 568
Q PG P P P P + GP P + P P G GS +
Sbjct: 708 QGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGI 767
Query: 569 QRP 571
Q P
Sbjct: 768 QGP 770
Score = 68 (29.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 50/173 (28%), Positives = 60/173 (34%)
Query: 417 PVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAP 476
P Q P+ Q +P G +QQP P S + P PQ G F PP Q
Sbjct: 589 PGQGPMSQ-IPQG-----FQQP-HP-SQQMPMNMAQMGPPGPQ-GQFRPP-GPQGQMGPQ 638
Query: 477 APAPVTS-----QPAMRPFIPSTPPV-LRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDA 530
P P+ Q M P P PP L + P G Q +PG P P P
Sbjct: 639 GP-PLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQ-GMQRHPGPHGPLGPQGPPGPQ 696
Query: 531 RGSLPSQIGAVPGPKMPNV-VAPT--PTPTGFM----PMSGSGVVQRPGMGSM 576
S P GP P + P P P G + P G+ PG M
Sbjct: 697 GSSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGM 749
Score = 66 (28.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 39/140 (27%), Positives = 51/140 (36%)
Query: 412 QYYQEPV-QSPLHQSVPGGTYGD-NYQQPLGPYSNGR--GYGASAAYQPAPQPGLFI--P 465
Q Q PV Q PL P G G ++ GP G G+ P P GL P
Sbjct: 765 QGIQGPVSQGPLMGLNPRGMQGPPGPRENQGPAPQGMIMGHPPQEMRGPHPPGGLLGHGP 824
Query: 466 PQATQPNFTAPAPAPVTSQPAMRPFIPST---PPVLRNAEQYQQPTLGSQLYPGVSNPGY 522
+ P P + P P PP ++ + Q +LG G+ P
Sbjct: 825 QEMRGPQEIRGMQGPPPQGSMLGP--PQELRGPPGSQSQQGPPQGSLGPPPQGGMQGPPG 882
Query: 523 PVPPVSDARGSLPSQIGAVP 542
P + ARG PSQ G +P
Sbjct: 883 PQGQQNPARGPHPSQ-GPIP 901
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 140 (54.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 57/196 (29%), Positives = 84/196 (42%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
L H V + F+ T LASG+ D + WDLS E HF +G+ + +
Sbjct: 110 LEGHSEAVISVAFSP-TGKYLASGSGDTTVRFWDLST--ETPHFT-CQGH----RHWVLS 161
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT---QLVV 235
+SW+ + LAS NG ++WD K V + + L W P A + V
Sbjct: 162 ISWSPDGKK-LASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVA 220
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWD 293
+S +D S +R+WD T + + GHT+ V + W D LL A +RTI W
Sbjct: 221 SSSKDGS--VRVWD--TTAGRCERILTGHTQSVTCLRW-GGDG--LLYSASQDRTIKVWR 273
Query: 294 TVSGEIVSELPAGTNW 309
G + L +W
Sbjct: 274 AHDGVLCRTLQGHGHW 289
Score = 105 (42.0 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 29/129 (22%), Positives = 62/129 (48%)
Query: 189 LASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLW 248
L S S + T +W + K ++ + + + ++PD ++++ ++ D S ++LW
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPD--SRIIASASFDKS--IKLW 399
Query: 249 DMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTN 308
D R T + GH V ++W DS L++ + D+ WD + ++ ++LP +
Sbjct: 400 DGR-TGKYLASLRGHVAAVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQKLAADLPGHAD 457
Query: 309 WNFDIHWYP 317
+ + W P
Sbjct: 458 EVYAVDWSP 466
Score = 65 (27.9 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN----LLASG 142
+A G +G I +W+P S+G+ G L H S+ + L + N +AS
Sbjct: 171 LASGCKNGQILLWDP----STGKQVGRALAGH-SKW---ITALSWEPLHANPECRYVASS 222
Query: 143 ADDGEICIWDLSA 155
+ DG + +WD +A
Sbjct: 223 SKDGSVRVWDTTA 235
Score = 48 (22.0 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 12 SVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLA 71
SVAF+P Y+A+G+ G + F + E Q +L + SP ++ LA
Sbjct: 119 SVAFSPTGKYLASGS--GDTTVRFWDLST-ETPHFTCQGHRHWVLSISWSPDGKK---LA 172
Query: 72 WG-KNG 76
G KNG
Sbjct: 173 SGCKNG 178
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 137 (53.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 51/211 (24%), Positives = 98/211 (46%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD 145
L+ G D S+ IW + +G+ + LS H P+ + FN +L+ SG+ D
Sbjct: 137 LIVSGSFDESVKIWE----VKTGKC-----LKTLSAHSDPISAVNFNC-NGSLIVSGSYD 186
Query: 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK 205
G IWD +A + LR +SFV ++ ++IL +T N T +WD +
Sbjct: 187 GLCRIWD-AASGQC-----LRTLADEGNPPVSFVKFSPNGKYILTATLDN-TLKLWDYSR 239
Query: 206 QKPVISFS-ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHT 264
+ + +++ ++ C ++ + VV+ ED+ + +W+++ T V+ GHT
Sbjct: 240 GRCLKTYTGHKNEKYCLFASFSV-TGRKWVVSGSEDNM--VYIWNLQ-TKEIVQRLQGHT 295
Query: 265 KGVIAMSWCPNDSSYLLTCAKDNRTI-CWDT 294
VI+ + P + ++++TI W +
Sbjct: 296 DVVISAACHPTKNIIASAALENDKTIKVWSS 326
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 127 (49.8 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 41/190 (21%), Positives = 80/190 (42%)
Query: 109 ETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGN 168
+T P+ A S H G L+++ P L +G I +W P + + +
Sbjct: 201 QTRMKPIFA-FSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLW---TPTDGGSWHVDQRP 256
Query: 169 GSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQW 225
+ + W+ + AS S + + +WD++ + +++ + + +V+ W
Sbjct: 257 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINW 316
Query: 226 NPDVATQLVVASDEDSSPALRLWDMRN--TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
+ +++ +D AL++WD+R + SPV F H V ++ W P DS
Sbjct: 317 SH--REPFLLSGGDDG--ALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAAS 372
Query: 284 AKDNRTICWD 293
DN+ WD
Sbjct: 373 GADNQITQWD 382
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 42/178 (23%), Positives = 78/178 (43%)
Query: 205 KQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS---PVKEFV 261
+ KP+ +FS + + L W+P V +L+ D + LW + S + FV
Sbjct: 203 RMKPIFAFSGHMGEGFA-LDWSPRVPGRLLTG---DCQKNIHLWTPTDGGSWHVDQRPFV 258
Query: 262 GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDT-VSGEIVSELPAGTNWNFD---IHWYP 317
GHT+ V + W P + + +C+ D WD + L T + D I+W
Sbjct: 259 GHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWSH 318
Query: 318 KIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFS--AAPLRAPKWYKRPAGASFGFGG 373
+ P ++S DG + ++++ + G + F AP+ + +W+ + +G F G
Sbjct: 319 REPFLLSGGD-DGALKVWDLRQF-KSGSPVATFKQHVAPVTSVEWHPQDSGV-FAASG 373
Score = 58 (25.5 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 312 DIHWYPKIPGVISASSFDG 330
++HW+P+ PGV+ +++ G
Sbjct: 419 ELHWHPQCPGVLVSTALSG 437
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 140 (54.3 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 50/203 (24%), Positives = 91/203 (44%)
Query: 139 LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198
+AS A DG + +W L + EP + G+ ++ V+W+ + L +T Y+ +
Sbjct: 281 MASCAADGSVKLWSLDSD-EP--IADIEGHSM----RVARVTWHPSGR-FLGTTCYDHSW 332
Query: 199 VVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVK 258
+WDL+ Q+ ++ E + L ++PD + L DS R+WD+R T V
Sbjct: 333 RLWDLEVQEEILH-QEGHSKGVHDLHFHPDGS--LAGTGGLDSFA--RVWDLR-TGRCVM 386
Query: 259 EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPK 318
GH K + ++++ PN ++ T + DN WD + +PA N + + P
Sbjct: 387 FLEGHIKEIYSINFSPN-GFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPN 445
Query: 319 IPGVISASSFDGKIGIYNIEGCS 341
+ ++D I+ G S
Sbjct: 446 DGHYLLTGAYDNTAKIWTHPGWS 468
>UNIPROTKB|Q13216 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9606 "Homo sapiens" [GO:0010165 "response to X-ray"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IMP;TAS] [GO:0006979 "response to oxidative stress"
evidence=IDA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0009411 "response to UV"
evidence=IMP;IDA] [GO:0045739 "positive regulation of DNA repair"
evidence=IMP] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IDA;IMP;TAS] [GO:0003678 "DNA
helicase activity" evidence=IDA] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000109 "nucleotide-excision
repair complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0016363 "nuclear matrix" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
Reactome:REACT_216 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0009411 GO:GO:0005654
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471123 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464 PDB:4A11
PDBsum:4A11 GO:GO:0000109 Orphanet:90321 Orphanet:90322
Orphanet:90324 Orphanet:178338 CTD:1161 HOVERGEN:HBG005409
OMA:TMLRGHY EMBL:U28413 EMBL:CR536563 EMBL:BT020021 EMBL:AY213194
EMBL:AK314511 EMBL:BC009793 IPI:IPI00012284 IPI:IPI00386696
PIR:A57090 RefSeq:NP_000073.1 UniGene:Hs.435237
ProteinModelPortal:Q13216 SMR:Q13216 DIP:DIP-291N IntAct:Q13216
MINT:MINT-1417899 STRING:Q13216 PhosphoSite:Q13216 DMDM:3121917
PRIDE:Q13216 DNASU:1161 Ensembl:ENST00000265038 GeneID:1161
KEGG:hsa:1161 UCSC:uc003jsl.3 UCSC:uc003jsn.3 GeneCards:GC05M060169
H-InvDB:HIX0004887 HGNC:HGNC:3439 MIM:216400 MIM:609412 MIM:614621
neXtProt:NX_Q13216 PharmGKB:PA27853 InParanoid:Q13216
OrthoDB:EOG4SN1NR PhylomeDB:Q13216 GenomeRNAi:1161 NextBio:4822
ArrayExpress:Q13216 Bgee:Q13216 CleanEx:HS_ERCC8
Genevestigator:Q13216 GermOnline:ENSG00000049167 Uniprot:Q13216
Length = 396
Score = 138 (53.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 56/240 (23%), Positives = 102/240 (42%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL------RGNGSAAQGE 175
H G + L+ + SG DG I ++DL + S++ R + +
Sbjct: 42 HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101
Query: 176 ISFVSWNSKVQHILASTSYNGTTVVWDLK--KQKPVISFSESIKRRCSVLQWNPDVATQL 233
+ V W + S+S++ T VWD + V +F E++ +P V+T+
Sbjct: 102 VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSH----HMSP-VSTKH 156
Query: 234 VVASDEDSSPALRLWDMRN-TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
+ + P ++L D+++ + S + + GH + ++A+SW P L T + D+R W
Sbjct: 157 CLVAVGTRGPKVQLCDLKSGSCSHILQ--GHRQEILAVSWSPRYDYILATASADSRVKLW 214
Query: 293 DTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASS-FDGKI-GI-YNIEGCSRYGVGDSN 349
D +G D H K V SA++ +GK+ G+ + +G VG N
Sbjct: 215 DV-------RRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN 267
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 142 (55.0 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 51/219 (23%), Positives = 101/219 (46%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H GPV G F+ N L S ++DG + +W L F L G +G ++ W
Sbjct: 540 HSGPVYGASFSP-DRNYLLSSSEDGTVRLWSLQT------FTCLVGY----KGH-NYPVW 587
Query: 182 NSKVQ---HILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVAS 237
+++ + S ++ +W +P+ F+ + C+ +++P+ + V
Sbjct: 588 DTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT--RFHPN--SNYVATG 643
Query: 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297
D + +RLWD+ N + V+ F GH + ++++ PN +L T A D R + WD G
Sbjct: 644 SADRT--VRLWDVLNG-NCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWDIGHG 699
Query: 298 EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336
+V EL T+ + + + ++++ S D + +++
Sbjct: 700 LMVGELKGHTDTVCSLR-FSRDGEILASGSMDNTVRLWD 737
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 142 (55.0 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 51/219 (23%), Positives = 101/219 (46%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H GPV G F+ N L S ++DG + +W L F L G +G ++ W
Sbjct: 542 HSGPVYGASFSP-DRNYLLSSSEDGTVRLWSLQT------FTCLVGY----KGH-NYPVW 589
Query: 182 NSKVQ---HILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVAS 237
+++ + S ++ +W +P+ F+ + C+ +++P+ + V
Sbjct: 590 DTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT--RFHPN--SNYVATG 645
Query: 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297
D + +RLWD+ N + V+ F GH + ++++ PN +L T A D R + WD G
Sbjct: 646 SADRT--VRLWDVLNG-NCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWDIGHG 701
Query: 298 EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336
+V EL T+ + + + ++++ S D + +++
Sbjct: 702 LMVGELKGHTDTVCSLR-FSRDGEILASGSMDNTVRLWD 739
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 142 (55.0 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 51/219 (23%), Positives = 101/219 (46%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H GPV G F+ N L S ++DG + +W L F L G +G ++ W
Sbjct: 543 HSGPVYGASFSP-DRNYLLSSSEDGTVRLWSLQT------FTCLVGY----KGH-NYPVW 590
Query: 182 NSKVQ---HILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVAS 237
+++ + S ++ +W +P+ F+ + C+ +++P+ + V
Sbjct: 591 DTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT--RFHPN--SNYVATG 646
Query: 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297
D + +RLWD+ N + V+ F GH + ++++ PN +L T A D R + WD G
Sbjct: 647 SADRT--VRLWDVLNG-NCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWDIGHG 702
Query: 298 EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336
+V EL T+ + + + ++++ S D + +++
Sbjct: 703 LMVGELKGHTDTVCSLR-FSRDGEILASGSMDNTVRLWD 740
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 136 (52.9 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 70/284 (24%), Positives = 128/284 (45%)
Query: 60 ESPSSERFNRLAWGKNGSGSEDFSLGL--VAGGLVDGSIDIWNPLSLISSGETGGNPLIA 117
E PS ER ++ DFSL +A G +D ++ IW+ + G
Sbjct: 7 EDPSLER--HFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTG----- 59
Query: 118 HLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEIS 177
HK V + F+ + +LLASG+ D + IW + E + F R + +A +
Sbjct: 60 ----HKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNVKGESTVF---RAH-TATVRSVH 110
Query: 178 FVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVA 236
F S +L + S + T VW +Q+ + S ++ I RC+ +++PD +L+V+
Sbjct: 111 FCSDGQ----LLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCA--KFSPD--GRLIVS 162
Query: 237 SDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296
+ +D + ++LWD + + V + H V + + P+ + + DN WDT +
Sbjct: 163 ASDDKT--VKLWD-KTSRECVHSYCEHGGFVTYVDFHPSGTC-IAAAGMDNTVKVWDTRT 218
Query: 297 GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI-EG 339
+V + + ++P +I+ASS D + I ++ EG
Sbjct: 219 HRLVQHYQLHSAAVNALSFHPSGNYLITASS-DSTLKILDLMEG 261
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 132 (51.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 43/176 (24%), Positives = 79/176 (44%)
Query: 207 KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS---PVKEFVGH 263
KP+ +FS + + L W+P V +L+ D + LW ++ S + FVGH
Sbjct: 204 KPIFAFSGHMGEGFA-LDWSPRVPGRLLTG---DCQKNIHLWTPTDSGSWHVDQRPFVGH 259
Query: 264 TKGVIAMSWCPNDSSYLLTCAKDNRTICWD---TVSGEIVSELPAGTNWNFD-IHWYPKI 319
T+ V + W P + + +C+ D WD S + PA N + + I W +
Sbjct: 260 TRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWSRQE 319
Query: 320 PGVISASSFDGKIGIYNIEGCSRYGVGDSNFS--AAPLRAPKWYKRPAGASFGFGG 373
P ++S DG + ++++ + G + F AP+ + +W+ + +G F G
Sbjct: 320 PFLLSGGD-DGALKVWDLRQF-KSGSPVATFKQHVAPVTSVEWHPQDSGV-FAASG 372
Score = 126 (49.4 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 40/185 (21%), Positives = 77/185 (41%)
Query: 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQ 173
P+ A S H G L+++ P L +G I +W P + + +
Sbjct: 205 PIFA-FSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLW---TPTDSGSWHVDQRPFVGHT 260
Query: 174 GEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDVA 230
+ + W+ + AS S + + +WD++ + +++ + +V+ W+
Sbjct: 261 RSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWSRQ-- 318
Query: 231 TQLVVASDEDSSPALRLWDMRN--TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR 288
+++ +D AL++WD+R + SPV F H V ++ W P DS DN+
Sbjct: 319 EPFLLSGGDDG--ALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQ 376
Query: 289 TICWD 293
WD
Sbjct: 377 ITQWD 381
Score = 58 (25.5 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 312 DIHWYPKIPGVISASSFDG 330
++HW+P+ PGV+ +++ G
Sbjct: 418 ELHWHPQCPGVLVSTALSG 436
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 143 (55.4 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 46/205 (22%), Positives = 94/205 (45%)
Query: 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGT 197
L+A+ A +G + IW+ S + A ++ ++W+ + + + S + T
Sbjct: 85 LIATAATNGAVVIWNTVREGSKSVERVFTDHSRA----VNKLAWHPEKLDCILTGSQDNT 140
Query: 198 TVVWDLKKQKPV--ISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
+WD++ I+FS + V Q+NP A Q A D + ++LWD+R
Sbjct: 141 LRMWDIRDSANASKITFSPKSESIRDV-QFNPSQANQFAAAFDNGT---IQLWDIRKPTI 196
Query: 256 PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHW 315
V++ H V+ + W P + + + + +D WD +G+ ++ + ++ + I W
Sbjct: 197 AVEKITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFSNGKSLNNVSTISSVS-RIKW 255
Query: 316 YPKIPG-VISASSF-DGKIGIYNIE 338
P + S SS D +I I++++
Sbjct: 256 RPGNKWHIASCSSIVDFQIHIWDVK 280
Score = 136 (52.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 48/229 (20%), Positives = 92/229 (40%)
Query: 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHK 123
S N+LAW L + G D ++ +W+ ++ + +P
Sbjct: 116 SRAVNKLAWHPE-------KLDCILTGSQDNTLRMWDIRDSANASKITFSP-------KS 161
Query: 124 GPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNS 183
+R ++FN N A+ D+G I +WD+ P ++ QG + + W+
Sbjct: 162 ESIRDVQFNPSQANQFAAAFDNGTIQLWDIRKPTIAVE------KITSHQGLVLTIDWHP 215
Query: 184 KVQHILASTSYNGTTVVWDLKKQKPV--ISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
+ ++I+AS + VWD K + +S S+ R ++W P + S
Sbjct: 216 EEKNIIASGGRDRAIRVWDFSNGKSLNNVSTISSVSR----IKWRPGNKWHIASCSSIVD 271
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI 290
+ +WD++ P+ F H + W S L++C+KD+ +
Sbjct: 272 FQ-IHIWDVKKPYIPLFSFTDHRDVPTGLIW--KSPSSLISCSKDSHLL 317
Score = 134 (52.2 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 48/212 (22%), Positives = 87/212 (41%)
Query: 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD 145
L+A +G++ IWN + G + + H V L ++ + + +G+ D
Sbjct: 85 LIATAATNGAVVIWNTV------REGSKSVERVFTDHSRAVNKLAWHPEKLDCILTGSQD 138
Query: 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK 205
+ +WD+ A S S I V +N + A+ NGT +WD++K
Sbjct: 139 NTLRMWDIRDSANASKI-----TFSPKSESIRDVQFNPSQANQFAAAFDNGTIQLWDIRK 193
Query: 206 QKPVISFSESIKRRCSVL--QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGH 263
P I+ + + VL W+P+ ++ + D A+R+WD N S V
Sbjct: 194 --PTIAVEKITSHQGLVLTIDWHPE-EKNIIASGGRDR--AIRVWDFSNGKS--LNNVST 246
Query: 264 TKGVIAMSWCPNDSSYLLTCAK--DNRTICWD 293
V + W P + ++ +C+ D + WD
Sbjct: 247 ISSVSRIKWRPGNKWHIASCSSIVDFQIHIWD 278
>DICTYBASE|DDB_G0285601 [details] [associations]
symbol:cdc20 "cdc20/fizzy domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143
dictyBase:DDB_G0285601 GO:GO:0005634 GO:GO:0045335 GO:GO:0051301
GO:GO:0007067 GenomeReviews:CM000153_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000079 eggNOG:COG2319 GO:GO:0016567 RefSeq:XP_638150.1
ProteinModelPortal:Q54MZ3 STRING:Q54MZ3 EnsemblProtists:DDB0237885
GeneID:8625198 KEGG:ddi:DDB_G0285601 KO:K03363 OMA:DAGTYSI
ProtClustDB:CLSZ2430186 Uniprot:Q54MZ3
Length = 499
Score = 139 (54.0 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 46/165 (27%), Positives = 76/165 (46%)
Query: 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG 196
N LA G + I +WD+ A LRG+ G + ++WN +IL+S S +
Sbjct: 236 NYLAVGTNSCTIQLWDV---AHTKKVRELRGHA----GRVGALAWND---YILSSGSSDT 285
Query: 197 TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR--NTM 254
D++ Q +S + L+W+ D QL +++ + +WD+ N
Sbjct: 286 NIFNHDVRVQNHHVSTLSGHSQEVCGLKWSHD-GGQLASGGNDN---IINIWDINSENFE 341
Query: 255 SPVKEFVGHTKGVIAMSWCPNDSSYLLTCA-KDNRTI-CWDTVSG 297
+P F HT V A++WCP + L T +RTI W+T++G
Sbjct: 342 TPAHTFEQHTAAVRALAWCPFQPNLLATGGGAADRTIRFWNTITG 386
>ASPGD|ASPL0000062179 [details] [associations]
symbol:AN0814 species:162425 "Emericella nidulans"
[GO:0033314 "mitotic DNA replication checkpoint" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0007094 "mitotic spindle assembly
checkpoint" evidence=IEA] [GO:0010997 "anaphase-promoting complex
binding" evidence=IEA] [GO:0033597 "mitotic checkpoint complex"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0032153 "cell division site" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 EMBL:AACD01000013
KO:K03363 HOGENOM:HOG000195514 OrthoDB:EOG4KD9V8 RefSeq:XP_658418.1
ProteinModelPortal:Q5BF66 STRING:Q5BF66
EnsemblFungi:CADANIAT00001846 GeneID:2876591 KEGG:ani:AN0814.2
OMA:QVAIGLE Uniprot:Q5BF66
Length = 618
Score = 140 (54.3 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 47/199 (23%), Positives = 85/199 (42%)
Query: 142 GADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVW 201
G GE+ IWD+ E + + G+ S + + W+ +H L++ + +G
Sbjct: 363 GLGTGEVQIWDVE---EGTKLRSMFGHES----RVGVMGWS---KHTLSTGARSGLVFNH 412
Query: 202 DLK-KQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF 260
D++ Q V C L+W D A QL +++ + +WD R+ +P
Sbjct: 413 DVRIAQHKVAELVSHTSEVCG-LEWRSDGA-QLATGGNDN---LVNIWDARSLSAPKFTK 467
Query: 261 VGHTKGVIAMSWCPNDSSYLLTC--AKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPK 318
H V A+SWCP + L T + D W+T +G + + G+ + W
Sbjct: 468 TNHRAAVKALSWCPWQLNLLATGGGSYDRHIHFWNTTTGARTNSIDTGSQVT-SLRWSNH 526
Query: 319 IPGVISASSF-DGKIGIYN 336
++S+S F D + I++
Sbjct: 527 YREIVSSSGFPDNSLSIWS 545
>TAIR|locus:2090792 [details] [associations]
symbol:LWD2 "AT3G26640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0043153 "entrainment of
circadian clock by photoperiod" evidence=IEP] [GO:0048573
"photoperiodism, flowering" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0048511 GO:GO:0048573
GO:GO:0043153 eggNOG:NOG314410 HOGENOM:HOG000260968 EMBL:X98130
EMBL:AB026648 ProtClustDB:CLSN2682478 EMBL:X97488 EMBL:BT004214
EMBL:AY086141 EMBL:BT020361 IPI:IPI00540911 RefSeq:NP_189298.1
UniGene:At.19781 ProteinModelPortal:Q38960 SMR:Q38960 STRING:Q38960
PaxDb:Q38960 PRIDE:Q38960 EnsemblPlants:AT3G26640.1 GeneID:822276
KEGG:ath:AT3G26640 GeneFarm:2845 TAIR:At3g26640 InParanoid:Q38960
OMA:HSSSHIC PhylomeDB:Q38960 Genevestigator:Q38960 Uniprot:Q38960
Length = 346
Score = 136 (52.9 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 43/179 (24%), Positives = 75/179 (41%)
Query: 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179
S GP+ ++N P + + + D IWD+ + A E+ +
Sbjct: 132 SEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQL-------IAHDKEVYDI 184
Query: 180 SWNSKVQHILASTSYNGTTVVWDLK-KQKPVISFSESIKRRCSV-LQWNPDVATQLVVAS 237
+W + AS S +G+ V+DL+ K+ I + V L WN + A+
Sbjct: 185 AWGGV--GVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYM--AT 240
Query: 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296
S + + D+R PV E H V A++W P+ SS++ + D++ + WD S
Sbjct: 241 VIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISS 299
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 135 (52.6 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 49/190 (25%), Positives = 83/190 (43%)
Query: 109 ETGG--NPLIAHLSRHKGPVRGLEFNSFT-PNLLASGADDGEICIWDLSAPAEPSHFPPL 165
+T G PL + H V ++++ L+ SG+ D + +WD P
Sbjct: 96 DTAGAAGPLQVY-KEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD---PTVGRSLCTF 151
Query: 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ--KPVISFSESIKRRCSVL 223
+G+ S I W+ + AS S + T +WD+K + V+ ++ C
Sbjct: 152 KGHESIIYSTI----WSPHIPGCFASASGDQTLRIWDVKTTGVRIVVPAHQAEILSCDWC 207
Query: 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283
++N + L+V D S LR WD+RN PV E +GHT + + + P +S L +C
Sbjct: 208 KYNEN----LLVTGAVDCS--LRGWDLRNVRQPVFELLGHTYAIRRVKFSPFYASVLASC 261
Query: 284 AKDNRTICWD 293
+ D W+
Sbjct: 262 SYDFTVRFWN 271
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 48/203 (23%), Positives = 94/203 (46%)
Query: 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWN-SKVQHILASTSYN 195
++L + + DG + +WD + A P L+ Q E+ V W+ ++ + ++ S S++
Sbjct: 81 HVLVTCSGDGSLQLWDTAGAAGP-----LQVYKEHTQ-EVYSVDWSQTRGEQLVVSGSWD 134
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
T +WD + + +F S + W+P + AS + + LR+WD++ T
Sbjct: 135 QTVKLWDPTVGRSLCTFKGHESIIYSTI-WSPHIPGCFASASGDQT---LRIWDVKTT-- 188
Query: 256 PVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS-GEIVSELPAGTNWNFDI 313
V+ V H +++ WC + + L+T A D WD + + V EL T +
Sbjct: 189 GVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRV 248
Query: 314 HWYPKIPGVISASSFDGKIGIYN 336
+ P V+++ S+D + +N
Sbjct: 249 KFSPFYASVLASCSYDFTVRFWN 271
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 135 (52.6 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 50/205 (24%), Positives = 96/205 (46%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
H G V ++FN ++ SG+ D I WD + P P++ A G +S V
Sbjct: 108 HAGKVNTVQFNE-EATVILSGSIDSSIRCWDCRS-RRPE---PVQTLDEARDG-VSSVKV 161
Query: 182 NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241
+ H + + S +G +DL+ + FS+ + + ++ D Q + S DS
Sbjct: 162 SD---HEILAGSVDGRVRRYDLRMGQ---LFSDYVGSPITCTCFSRD--GQCTLVSSLDS 213
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPND-SSYLLTCAKDNRTICWDTVSGEIV 300
+ LRL D ++T + E+ GH + C ++ +++++C++D + WD V G +
Sbjct: 214 T--LRLLD-KDTGELLGEYKGHKNQEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALA 270
Query: 301 SELPAGTNWNFDIHWYPKIPGVISA 325
LP G+ + ++P P +++A
Sbjct: 271 LALPVGSGVVQSLAYHPTEPCLLTA 295
>GENEDB_PFALCIPARUM|PFL1975c [details] [associations]
symbol:PFL1975c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014188 HSSP:P46680 OMA:TALCTQW
RefSeq:XP_001350799.1 ProteinModelPortal:Q8I518 IntAct:Q8I518
MINT:MINT-1581047 EnsemblProtists:PFL1975c:mRNA GeneID:811447
KEGG:pfa:PFL1975c EuPathDB:PlasmoDB:PF3D7_1241100
HOGENOM:HOG000283504 ProtClustDB:CLSZ2432595 Uniprot:Q8I518
Length = 468
Score = 138 (53.6 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 74/286 (25%), Positives = 120/286 (41%)
Query: 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS-ESIK-RRCSVLQWNPDVATQ 232
+IS N+K LA + ++WD+K +K + ++I S L WNP
Sbjct: 177 DISLSCCNTK----LAGCADTCNPIIWDIKTRKVIKDLKCKNIDTNNISCLAWNP---IN 229
Query: 233 LVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
+VAS + + + WD+R P+ H V + W N+ YLL+C+KD+ W
Sbjct: 230 DIVASG-NRTHTISFWDIRMN-KPIISLNSHKANVNKIKW-NNNGIYLLSCSKDSLIKLW 286
Query: 293 DTVSGEIV----SELPAGTNW--NFD---IHWYPKIPGVISASSFDGKIGIY--NIEGC- 340
D + +++ ++ + N++ I W P + S++ G I Y N C
Sbjct: 287 DIRNFKLLYSYKNDQIQNNKFTSNYEPTYIAWNPIQNHIFSSADNKGNIKFYSTNDNKCI 346
Query: 341 ----SRYGVGDSNFSAAPLRAPKWYKRPAG---ASFGFGGKLVSFHPKSSAG--HTSENS 391
S +G+ D+ S+ L W P G SFG KL+ F SS+G ++ E
Sbjct: 347 QTIVSAHGI-DNKISSISLL--DW--NPLGHILTSFG-DDKLLKFWSTSSSGSIYSKEID 400
Query: 392 QHAPVHGVDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGTYGDNYQQ 437
+ VH + + Y V S +QS+ D YQQ
Sbjct: 401 AKSLVHVTNSGVFPNSRYINDEYMLDVNS--NQSISDSDEND-YQQ 443
>UNIPROTKB|Q8I518 [details] [associations]
symbol:PFL1975c "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014188 HSSP:P46680 OMA:TALCTQW
RefSeq:XP_001350799.1 ProteinModelPortal:Q8I518 IntAct:Q8I518
MINT:MINT-1581047 EnsemblProtists:PFL1975c:mRNA GeneID:811447
KEGG:pfa:PFL1975c EuPathDB:PlasmoDB:PF3D7_1241100
HOGENOM:HOG000283504 ProtClustDB:CLSZ2432595 Uniprot:Q8I518
Length = 468
Score = 138 (53.6 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 74/286 (25%), Positives = 120/286 (41%)
Query: 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS-ESIK-RRCSVLQWNPDVATQ 232
+IS N+K LA + ++WD+K +K + ++I S L WNP
Sbjct: 177 DISLSCCNTK----LAGCADTCNPIIWDIKTRKVIKDLKCKNIDTNNISCLAWNP---IN 229
Query: 233 LVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
+VAS + + + WD+R P+ H V + W N+ YLL+C+KD+ W
Sbjct: 230 DIVASG-NRTHTISFWDIRMN-KPIISLNSHKANVNKIKW-NNNGIYLLSCSKDSLIKLW 286
Query: 293 DTVSGEIV----SELPAGTNW--NFD---IHWYPKIPGVISASSFDGKIGIY--NIEGC- 340
D + +++ ++ + N++ I W P + S++ G I Y N C
Sbjct: 287 DIRNFKLLYSYKNDQIQNNKFTSNYEPTYIAWNPIQNHIFSSADNKGNIKFYSTNDNKCI 346
Query: 341 ----SRYGVGDSNFSAAPLRAPKWYKRPAG---ASFGFGGKLVSFHPKSSAG--HTSENS 391
S +G+ D+ S+ L W P G SFG KL+ F SS+G ++ E
Sbjct: 347 QTIVSAHGI-DNKISSISLL--DW--NPLGHILTSFG-DDKLLKFWSTSSSGSIYSKEID 400
Query: 392 QHAPVHGVDQSKYGMVDSSQQYYQEPVQSPLHQSVPGGTYGDNYQQ 437
+ VH + + Y V S +QS+ D YQQ
Sbjct: 401 AKSLVHVTNSGVFPNSRYINDEYMLDVNS--NQSISDSDEND-YQQ 443
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 136 (52.9 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 50/200 (25%), Positives = 90/200 (45%)
Query: 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195
P L+ +G+DDG + +WD+ A F ++ V++N I+ S +
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTY--------QVLAVTFNDTSDQII-SGGID 215
Query: 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255
VWDL++ K + SV + ++++ D++ +R+WD+R +
Sbjct: 216 NDIKVWDLRQNKLTYTMRGHAD---SVTGLSLSSEGSYLLSNAMDNT--VRVWDVR-PFA 269
Query: 256 P----VKEFVGHT----KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT 307
P V+ F G+ K ++ SW P D S + + D WDT S I+ +LP
Sbjct: 270 PKERCVRIFQGNVHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRILYKLPGHA 328
Query: 308 NWNFDIHWYPKIPGVISASS 327
++ ++P P ++SASS
Sbjct: 329 GSINEVAFHPDEPIILSASS 348
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 46/179 (25%), Positives = 85/179 (47%)
Query: 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEI 176
A L H G V L +N+ ++L S + D + +WD S E L+G+ S
Sbjct: 104 ATLKGHSGAVMELHYNT-DGSMLFSASTDKTVAVWD-SETGE--RVKRLKGHTSFVNS-- 157
Query: 177 SFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVA 236
+ + + ++ + S +GT +WD++K+ + +F + + + +N D + Q++
Sbjct: 158 CYPA--RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFN-DTSDQIISG 212
Query: 237 S-DEDSSPALRLWDMR-NTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293
D D +++WD+R N ++ GH V +S ++ SYLL+ A DN WD
Sbjct: 213 GIDND----IKVWDLRQNKLTYTMR--GHADSVTGLS-LSSEGSYLLSNAMDNTVRVWD 264
>TAIR|locus:2136133 [details] [associations]
symbol:SPA2 "SPA1-related 2" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR017986 InterPro:IPR000719 InterPro:IPR001680
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400
PROSITE:PS50011 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161531 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004672 GO:GO:0009585
GO:GO:0080008 EMBL:AF080120 EMBL:AL049876 HOGENOM:HOG000029775
EMBL:AK229182 IPI:IPI00538672 PIR:T01922 PIR:T01923 PIR:T08190
RefSeq:NP_192849.4 UniGene:At.46392 ProteinModelPortal:Q9T014
SMR:Q9T014 IntAct:Q9T014 STRING:Q9T014 PRIDE:Q9T014
EnsemblPlants:AT4G11110.1 GeneID:826712 KEGG:ath:AT4G11110
GeneFarm:3132 TAIR:At4g11110 InParanoid:Q0WP97 OMA:FGGHTNE
PhylomeDB:Q9T014 ProtClustDB:CLSN2920287 Genevestigator:Q9T014
Uniprot:Q9T014
Length = 1036
Score = 142 (55.0 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 61/247 (24%), Positives = 106/247 (42%)
Query: 52 DRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETG 111
DRDLL ++ +E N W S D +G GL + S ET
Sbjct: 666 DRDLLRNSDNTVAEVENSETW------SSDDRVGAFFDGLCK--------YARYSKFETR 711
Query: 112 GNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPS---HFPPLRGN 168
G + L+ + L F+ +G +I I++ ++ S H+P +
Sbjct: 712 GVLRTSELNNTSNVICSLGFDRDEDYFATAGVSK-KIKIYEFNSLFNESVDIHYPAIE-- 768
Query: 169 GSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPD 228
+ ++S V WN+ +++ LAS+ Y+G +WD+ + + F E KR SV ++
Sbjct: 769 -MPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSV-DFSEA 826
Query: 229 VATQLVVASDEDSSPALRLWDM--RNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD 286
T+L SD+ S ++LW++ RN + ++ V + + P S L + D
Sbjct: 827 CPTKLASGSDDCS---VKLWNINERNCLGTIRNIAN----VCCVQFSPQSSHLLAFGSSD 879
Query: 287 NRTICWD 293
RT C+D
Sbjct: 880 FRTYCYD 886
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 134 (52.2 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 57/221 (25%), Positives = 103/221 (46%)
Query: 93 DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWD 152
DG + +W G G L+ L+ H+GPV+ F+ L+AS + D I +WD
Sbjct: 47 DGCVYVW--------GTKSGR-LLWRLAGHRGPVKSCCFSP-DGRLIASSSSDHSIRLWD 96
Query: 153 LSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF 212
+ A ++ H L+G+ + + +SF S +SK LAS ++ +VW+++ + V
Sbjct: 97 V-ARSKCLHV--LKGHQRSVE-TVSF-SPDSKQ---LASGGWDKRAIVWEVQSGRRV--- 145
Query: 213 SESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF---VGHTKGVIA 269
+ C +Q + T +A+ S + +WD+R + +PV + GHT +
Sbjct: 146 -HLLVGHCDSIQSSDFSPTSDSLATGSWDS-TVHIWDLRAS-TPVVSYHNLEGHTGNISC 202
Query: 270 MSWCPNDSSYLLTCAKDNRTIC-WDTVSGEIVSELPAGTNW 309
+ + +S LL ++TIC W + + +L T W
Sbjct: 203 LCY---SASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIW 240
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 50/186 (26%), Positives = 88/186 (47%)
Query: 123 KGPVRGLEFNSFTPNL--LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVS 180
KG R +E SF+P+ LASG D +W++ + H L G+ + Q F
Sbjct: 107 KGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQS-GRRVHL--LVGHCDSIQSS-DF-- 160
Query: 181 WNSKVQHILASTSYNGTTVVWDLKKQKPVISFS--ESIKRRCSVLQWNPDVATQLVVASD 238
S LA+ S++ T +WDL+ PV+S+ E S L ++ A+ L+ +
Sbjct: 161 --SPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYS---ASGLLASGS 215
Query: 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWDTVSG 297
D + + +W P+ + GHT V ++++ P++ L A +RT+ WD ++G
Sbjct: 216 WDKT--ICVWKPTTNNLPL-QLKGHTIWVNSLAFSPDELK--LASAGYSRTVKVWDCLTG 270
Query: 298 EIVSEL 303
+ + L
Sbjct: 271 KCLETL 276
>UNIPROTKB|Q2KJH4 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9913
"Bos taurus" [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 InterPro:IPR011045 SUPFAM:SSF50974
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000162559 HOVERGEN:HBG000780 EMBL:BC105341
IPI:IPI00716638 RefSeq:NP_001039811.1 UniGene:Bt.59546
ProteinModelPortal:Q2KJH4 STRING:Q2KJH4 PRIDE:Q2KJH4 GeneID:533223
KEGG:bta:533223 CTD:9948 OrthoDB:EOG4WH8KB NextBio:20875962
Uniprot:Q2KJH4
Length = 606
Score = 139 (54.0 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 70/304 (23%), Positives = 128/304 (42%)
Query: 15 FAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGK 74
+AP Y+A+G ++G + + + ++ + K ++Q + + + S+R + G+
Sbjct: 66 YAPSGFYIASGDVSGKLRI-WDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 124
Query: 75 NGSGS-----EDFSLGLVAG-GLVDGSIDIWN--PLSLISSGETG------GNPLIAH-- 118
G+ S+G + G V S+DI P L++ + G P
Sbjct: 125 EKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLVTGSDDNCAAFFEGPPFKFKFT 184
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178
+S H V + F+ N A+ + DG+I I+D + G A G I
Sbjct: 185 ISDHGRFVNCVRFSP-DGNRFATASADGQIFIYDGKTGEKVCAL----GGSKAHDGGIYA 239
Query: 179 VSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF---SESIKRRCSVLQWNPDVATQLVV 235
+SW+ H+L S S + T+ +WD+ V +F S + ++ L W D L+
Sbjct: 240 ISWSPDSTHLL-SASGDKTSKIWDVNVNSVVNTFTMGSNVLDQQLGCL-WQKD---HLLS 294
Query: 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDS-SYLLTCAKDNRTICWDT 294
S S + D N P++ GH+K + ++ N SY+ + + D WD+
Sbjct: 295 IS---LSGYINYLDKNNPSKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWDS 351
Query: 295 VSGE 298
+GE
Sbjct: 352 ETGE 355
>ZFIN|ZDB-GENE-040426-703 [details] [associations]
symbol:dcaf13 "ddb1 and cul4 associated factor 13"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143
ZFIN:ZDB-GENE-040426-703 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016567 GO:GO:0030529 GO:GO:0006364 GO:GO:0080008 CTD:25879
HOGENOM:HOG000210082 HOVERGEN:HBG056998 KO:K11806 OrthoDB:EOG4T4CVF
InterPro:IPR007287 Pfam:PF04158 EMBL:BC044155 IPI:IPI00618021
RefSeq:NP_956423.1 UniGene:Dr.79195 ProteinModelPortal:Q803X4
STRING:Q803X4 GeneID:393097 KEGG:dre:393097 InParanoid:Q803X4
NextBio:20814171 ArrayExpress:Q803X4 Uniprot:Q803X4
Length = 445
Score = 137 (53.3 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 69/265 (26%), Positives = 117/265 (44%)
Query: 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142
SL V G DG + +WN L T + H+G VRG+ + F +
Sbjct: 78 SLSTVISGACDGEVKVWN-LPKRECTRT--------VQAHEGFVRGI-CSRFCGTSFFTV 127
Query: 143 ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN-GTTV-V 200
DD I W++ AP P+ + G+ F + H T G TV +
Sbjct: 128 GDDKTIKQWNMEAPGYGVREEPI----NTILGKAVFTGID---HHQREGTFVTCGQTVDI 180
Query: 201 WDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF 260
WD ++ PV+SFS + SV ++NP V L+ + D S + L+D R + +P+++
Sbjct: 181 WDEQRSSPVLSFSWGVDSFSSV-RYNP-VEPDLLASCASDRS--IVLYDTRES-APLRKV 235
Query: 261 VGHTKGVIAMSWCPNDSSYLLTCAKDNRTI-CWDTVSGEI-VSELPAGTNWNFDIHWYPK 318
+ + + W P ++ Y TCA ++ + +D + ++ V+ + D+ + P
Sbjct: 236 IMQLRSN-TLCWNPMEA-YYFTCANEDYNLYTYDIRNLDVPVTVHMDHVSAVLDVDYSPT 293
Query: 319 IPGVISASSFDGKIGIY-NIEGCSR 342
+SAS FD I I+ +G SR
Sbjct: 294 GREFVSAS-FDKTIRIFPKDKGHSR 317
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 125 (49.1 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 50/211 (23%), Positives = 91/211 (43%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
HK +R F+ T N A+ +DDG + IWD E LRG+G+ ++ V W
Sbjct: 202 HKEAIREASFSP-TDNKFATCSDDGTVRIWDFLRCHEERI---LRGHGA----DVKCVDW 253
Query: 182 NSKVQHILASTSYNGTTVV--WDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDE 239
+ + ++ S S + + WD K + + + + K ++ N + L+ AS +
Sbjct: 254 HP-TKGLVVSGSKDSQQPIKFWDPKTGQSLATL-HAHKNTVMEVKLNLN-GNWLLTASRD 310
Query: 240 DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDT-VSGE 298
+L+D+RN ++ F GH K A++W P + D + W V E
Sbjct: 311 H---LCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKE 367
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFD 329
+ A + + W+P + ++ + S D
Sbjct: 368 VGGMEMAHEGMIWSLAWHP-LGHILCSGSND 397
Score = 70 (29.7 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 47/183 (25%), Positives = 63/183 (34%)
Query: 405 GMVDSSQQYYQEP---VQSPLH--QSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQ 459
G + Q +Q+P Q P++ Q P G G ++ P GP G +Q
Sbjct: 593 GPMSQIPQGFQQPHPSQQMPMNMAQMGPPGPQGQ-FRPP-GPQGQ-MGPQGPPLHQGGGG 649
Query: 460 PGLFIPPQATQ-PNFTAPAPAPVTSQPAMR-------PFIPSTPPVLRNAEQYQQPTLGS 511
P F+ PQ Q P P P + M+ P P PP + Q +G
Sbjct: 650 PQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQG-NSGPQGHMGP 708
Query: 512 QLYPGVSN---PGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMPMSGSGVV 568
Q PG P P P P + GP P + P P G GS +
Sbjct: 709 QGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGI 768
Query: 569 QRP 571
Q P
Sbjct: 769 QGP 771
Score = 68 (29.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 50/173 (28%), Positives = 60/173 (34%)
Query: 417 PVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAP 476
P Q P+ Q +P G +QQP P S + P PQ G F PP Q
Sbjct: 590 PGQGPMSQ-IPQG-----FQQP-HP-SQQMPMNMAQMGPPGPQ-GQFRPP-GPQGQMGPQ 639
Query: 477 APAPVTS-----QPAMRPFIPSTPPV-LRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDA 530
P P+ Q M P P PP L + P G Q +PG P P P
Sbjct: 640 GP-PLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQ-GMQRHPGPHGPLGPQGPPGPQ 697
Query: 531 RGSLPSQIGAVPGPKMPNV-VAPT--PTPTGFM----PMSGSGVVQRPGMGSM 576
S P GP P + P P P G + P G+ PG M
Sbjct: 698 GNSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGM 750
Score = 67 (28.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 39/140 (27%), Positives = 50/140 (35%)
Query: 412 QYYQEPV-QSPLHQSVPGGTYGD-NYQQPLGPYSNGR--GYGASAAYQPAPQPGLFI--P 465
Q Q PV Q PL P G G ++ GP G G+ P P GL P
Sbjct: 766 QGIQGPVSQGPLMGLNPRGMQGPPGPRETQGPAPQGMMLGHPPQEMRGPHPPSGLLGHGP 825
Query: 466 PQATQPNFTAPAPAPVTSQPAMRPFIPST---PPVLRNAEQYQQPTLGSQLYPGVSNPGY 522
+ P P + P P PP + + Q +LG G+ P
Sbjct: 826 QEMRGPQEMRGMQGPPPQGSMLGP--PQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPG 883
Query: 523 PVPPVSDARGSLPSQIGAVP 542
P + ARG PSQ G +P
Sbjct: 884 PQGQQNPARGPHPSQ-GPIP 902
Score = 55 (24.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 487 MRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYP--VPPVSDARGSLPSQIGAVPGP 544
+ PF P L+ + Q Q L PG+ G +PP++ +G P+++ A P
Sbjct: 1051 VEPFPQFKTPALKTSFQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKVIAKTLP 1110
Query: 545 K 545
+
Sbjct: 1111 R 1111
>FB|FBgn0027518 [details] [associations]
symbol:CG7609 species:7227 "Drosophila melanogaster"
[GO:0007031 "peroxisome organization" evidence=ISS] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
UniGene:Dm.3193 FlyBase:FBgn0027518 NextBio:834288 EMBL:AF132181
RefSeq:NP_651720.3 SMR:Q9XZ25 EnsemblMetazoa:FBtr0085543
GeneID:43505 KEGG:dme:Dmel_CG7609 UCSC:CG7609-RB InParanoid:Q9XZ25
GenomeRNAi:43505 Uniprot:Q9XZ25
Length = 776
Score = 140 (54.3 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 53/229 (23%), Positives = 98/229 (42%)
Query: 70 LAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGL 129
L++ N L+A +G + +W+ L G L+ + + H+ +
Sbjct: 64 LSYSANDVAWSTLDSNLLATAATNGVVSVWD---LSKFGRQ--KQLLVY-NEHERTAHTV 117
Query: 130 EFNSFTPNLLASGADDGEICIWDL-SAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHI 188
F+S PN+L SG+ DG I +D+ S + ++F N + + V ++ Q+I
Sbjct: 118 TFHSSEPNILISGSQDGTIKCFDIRSDKSINTYFC----NSESVRD----VKFSPHTQNI 169
Query: 189 LASTSYNGTTVVWDLKK-QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRL 247
++ S NGT +WD++K K ++ F+ W+P + D +++
Sbjct: 170 FSAVSENGTVQLWDMRKWDKCMVQFTAHYGP-VYTCDWHP--TRNWLATGSRDKQ--IKV 224
Query: 248 WDMRNTMSPVKEFVGHTKGVIA-MSWCPNDSSYLLTCAK--DNRTICWD 293
W+M P E HT V+ + W P + ++ +CA D WD
Sbjct: 225 WNMDGR--PGLEHTIHTIAVVGRVKWRPERTYHIASCALVVDYSVHVWD 271
Score = 122 (48.0 bits), Expect = 0.00084, P = 0.00084
Identities = 42/205 (20%), Positives = 99/205 (48%)
Query: 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK---QKPVISFSESIKRRCS 221
+RG + V+W++ ++LA+ + NG VWDL K QK ++ ++E +R
Sbjct: 57 MRGKNQNLSYSANDVAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEH-ERTAH 115
Query: 222 VLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLL 281
+ ++ ++++ +D + ++ +D+R+ S + + +++ V + + P+ + +
Sbjct: 116 TVTFHSS-EPNILISGSQDGT--IKCFDIRSDKS-INTYFCNSESVRDVKFSPHTQN-IF 170
Query: 282 TCAKDNRTI-CWDTVSGE-IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339
+ +N T+ WD + + + A + W+P ++ S D +I ++N++G
Sbjct: 171 SAVSENGTVQLWDMRKWDKCMVQFTAHYGPVYTCDWHPT-RNWLATGSRDKQIKVWNMDG 229
Query: 340 CSRYGVGDSNFSAAPLRAPKWYKRP 364
R G+ + + A + KW RP
Sbjct: 230 --RPGLEHTIHTIAVVGRVKW--RP 250
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 125 (49.1 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 50/211 (23%), Positives = 91/211 (43%)
Query: 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW 181
HK +R F+ T N A+ +DDG + IWD E LRG+G+ ++ V W
Sbjct: 201 HKEAIREASFSP-TDNKFATCSDDGTVRIWDFLRCHEERI---LRGHGA----DVKCVDW 252
Query: 182 NSKVQHILASTSYNGTTVV--WDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDE 239
+ + ++ S S + + WD K + + + + K ++ N + L+ AS +
Sbjct: 253 HP-TKGLVVSGSKDSQQPIKFWDPKTGQSLATL-HAHKNTVMEVKLNLN-GNWLLTASRD 309
Query: 240 DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDT-VSGE 298
+L+D+RN ++ F GH K A++W P + D + W V E
Sbjct: 310 H---LCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKE 366
Query: 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFD 329
+ A + + W+P + ++ + S D
Sbjct: 367 VGGMEMAHEGMIWSLAWHP-LGHILCSGSND 396
Score = 69 (29.3 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 54/204 (26%), Positives = 63/204 (30%)
Query: 380 PKSSAGHTSENSQHAPVHG-VDQSKYGMVDS--SQQYYQEPVQ----SPLHQSVPGGTYG 432
P S+G Q P G + Q G SQQ Q P Q P G G
Sbjct: 574 PPPSSGTPLLGPQPFPGQGPMSQIPQGFQQPHPSQQLSMNMAQMGPPGPQGQFRPPGPQG 633
Query: 433 DNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQATQPNFTAPAPAPVTSQPAMR-PFI 491
P GP + G G P G PPQ P + P P
Sbjct: 634 Q--MGPQGPPLHQGGGGPQGFMGPQGPQG---PPQGLPRPQDMHGPQGIQRHPGPHGPLG 688
Query: 492 PSTPPVLR-NAEQYQQPTLGSQLYPGVSN---PGYPVPPVSDARGSLPSQIGAVPGPKMP 547
P PP + NA Q +G Q PG P P P P + GP P
Sbjct: 689 PQGPPGPQGNAGP--QGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGP 746
Query: 548 NVVAPTPTPTGFMPMSGSGVVQRP 571
+ P P G GS +Q P
Sbjct: 747 RGMQGPPHPHGIQGGPGSQGIQGP 770
Score = 66 (28.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 39/140 (27%), Positives = 50/140 (35%)
Query: 412 QYYQEPV-QSPLHQSVPGGTYGD-NYQQPLGPYSNGR--GYGASAAYQPAPQPGLFI--P 465
Q Q PV Q PL P G G ++ GP G G+ P P GL P
Sbjct: 765 QGIQGPVSQGPLMGLNPRGMQGPPGPRENQGPAPQGMMLGHPPQEMRGPHPPSGLLGHGP 824
Query: 466 PQATQPNFTAPAPAPVTSQPAMRPFIPST---PPVLRNAEQYQQPTLGSQLYPGVSNPGY 522
+ P P + P P PP + + Q +LG G+ P
Sbjct: 825 QEMRGPQEMRGMQGPPPQGSMLGP--PQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPG 882
Query: 523 PVPPVSDARGSLPSQIGAVP 542
P + ARG PSQ G +P
Sbjct: 883 PQGQQNPARGPHPSQ-GPIP 901
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 52/231 (22%), Positives = 103/231 (44%)
Query: 109 ETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSH-FPPLRG 167
+T + L H+ V + FN+ + +A+G+ D +W AE + RG
Sbjct: 120 DTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWS----AETGKCYHTFRG 175
Query: 168 NGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNP 227
+ + EI +S+N + ++A+ S + T +WD++ + V++ + + ++ +
Sbjct: 176 HTA----EIVCLSFNPQ-STVVATGSMDTTAKLWDIQSGEEVVTLTGHL---AEIISLSF 227
Query: 228 DVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIA--MSWCPNDSSYLLTCAK 285
D + ++ D + + WD +T V +GH + + SW D S +LT +
Sbjct: 228 DTSGDRIITGSFDHTVVV--WDA-STGRKVHTLIGHCAEISSALFSW---DCSLILTGSM 281
Query: 286 DNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336
D + WD SG+ V+ L + D + +I+ +S DG +YN
Sbjct: 282 DKTCMLWDATSGKCVATLTGHDDEILD-SCFDYTGKLIATASADGTARVYN 331
>TAIR|locus:2124142 [details] [associations]
symbol:AT4G18670 "AT4G18670" species:3702 "Arabidopsis
thaliana" [GO:0005199 "structural constituent of cell wall"
evidence=ISS] [GO:0009506 "plasmodesma" evidence=IDA]
PROSITE:PS51450 GO:GO:0009506 GO:GO:0005618 GO:GO:0005576
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161549
eggNOG:NOG12793 GO:GO:0005199 InterPro:IPR013210 Pfam:PF08263
EMBL:AL035526 ProtClustDB:CLSN2916045 EMBL:AK228621 IPI:IPI00520564
IPI:IPI00968855 PIR:T04859 RefSeq:NP_193602.4 UniGene:At.46566
UniGene:At.71561 ProteinModelPortal:Q9SN46 SMR:Q9SN46 PaxDb:Q9SN46
PRIDE:Q9SN46 EnsemblPlants:AT4G18670.1 GeneID:827601
KEGG:ath:AT4G18670 TAIR:At4g18670 InParanoid:Q9SN46 OMA:NSVHEEY
Genevestigator:Q9SN46 Uniprot:Q9SN46
Length = 857
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/151 (33%), Positives = 66/151 (43%)
Query: 417 PVQSPLHQSVPGGTYGDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFIPPQA-TQPNFTA 475
P SP + PGG+ + P P S G G S + P+P + PP T P +
Sbjct: 494 PPSSPTTPT-PGGSPPSS---PTTP-SPG-GSPPSPSISPSPPITVPSPPSTPTSPG-SP 546
Query: 476 PAPA-PVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVPPVSDARGSL 534
P+P+ P S P P PSTPP + Q P + S + G S P P PP+ S
Sbjct: 547 PSPSSPTPSSPIPSPPTPSTPPTPISPGQNSPPIIPSPPFTGPSPPSSPSPPLPPVIPS- 605
Query: 535 PSQIGAVPG---PKMPN-VVAPTPTPTGFMP 561
P +G P P P V +P P TG+ P
Sbjct: 606 PPIVGPTPSSPPPSTPTPVYSPPPPSTGYPP 636
Score = 127 (49.8 bits), Expect = 0.00027, P = 0.00027
Identities = 36/108 (33%), Positives = 47/108 (43%)
Query: 456 PAP-QPGLFIPPQATQPNFTAPAPAPVTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLY 514
P P PG PP P FT P+P P + P + P IPS PP++ P+ + +Y
Sbjct: 568 PTPISPGQNSPPIIPSPPFTGPSP-PSSPSPPLPPVIPS-PPIVGPTPSSPPPSTPTPVY 625
Query: 515 -PGVSNPGYPVPPVSDARGSLPSQIGAVPGPKMPNVVAPTPTPTGFMP 561
P + GYP PP S PS P P+ P P P + P
Sbjct: 626 SPPPPSTGYPPPPPFTGY-SPPSPPPPPPPTFSPSPSIPPPPPQTYSP 672
>UNIPROTKB|E1BR57 [details] [associations]
symbol:PAM16 "Coronin" species:9031 "Gallus gallus"
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005794 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08954 EMBL:AADN02049338 EMBL:AADN02049339
EMBL:AADN02049340 EMBL:AADN02049341 EMBL:AADN02049342
EMBL:AADN02049343 EMBL:AADN02049344 IPI:IPI00819431
Ensembl:ENSGALT00000039544 ArrayExpress:E1BR57 Uniprot:E1BR57
Length = 895
Score = 142 (55.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 60/239 (25%), Positives = 100/239 (41%)
Query: 108 GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRG 167
G GG ++ L H V +F+ F P LLA+G+ D + +W L P E P G
Sbjct: 62 GRDGGKRTVSQLCCHSDAVTDFDFSPFDPFLLATGSADEMVKVWRL--PEEGQELPSSAG 119
Query: 168 NG-SAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWN 226
G + + ++ IL S TV WD+ +Q+P+ + E+ + L W
Sbjct: 120 LMLGPGGGTVDMLQFHPTADGILTSGVGKRVTV-WDVGQQQPLAAL-EAHGDQLQSLSWK 177
Query: 227 PDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIA-MSWCPNDSSYLLTCA- 284
D +L+ S +D LR++D R + + + GH + + W S L++
Sbjct: 178 HD--GRLLGTSCKDKK--LRIFDPRASPAASQSVPGHENNKDSRLLWM-GASDCLISVGF 232
Query: 285 ---KDNRTICWDT--VSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338
++ WDT SG + L T+ + P GV S + G+ +Y +E
Sbjct: 233 SQMREREVKLWDTRKFSGATFT-LALDTSSGCHLLLVPSSEGVTSMGAKQGENLLYCLE 290
Score = 47 (21.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 432 GDNYQQPLGPYSNGRGYGASAAYQPAPQPGLFI--PPQATQPNFTAPA 477
G Y P G ++ GAS + P G F+ P Q + + P+
Sbjct: 423 GSGYSSPSGSLTSPSSAGASLSTSTGPSSG-FVSSPSQKSLQSILGPS 469
Score = 44 (20.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 19/74 (25%), Positives = 27/74 (36%)
Query: 481 VTSQPAMRPFIPSTPPVLRNAEQYQQPTLGSQLYPGVSNPGYPVPPVS-DARGSLPSQIG 539
V+ PA RP P++ A Q P G GY P S + S + +
Sbjct: 385 VSLHPARRPTETFCSPLITAAPSTQLPDDGPVDSDRSEGSGYSSPSGSLTSPSSAGASLS 444
Query: 540 AVPGPKMPNVVAPT 553
GP V +P+
Sbjct: 445 TSTGPSSGFVSSPS 458
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 51/225 (22%), Positives = 101/225 (44%)
Query: 116 IAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGE 175
I L H GPV F + LL S ++D + WDL + + RG+
Sbjct: 347 IKTLRGHSGPVYRTAFLTDASGLL-SCSEDSTVRYWDLKSFTNTVLY---RGH------- 395
Query: 176 ISFVSWNSKVQ--HILAST-SYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQ 232
++ W+ V + ST S++ T +W + P+ ++ + ++++P+ +
Sbjct: 396 -AYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSD-VDCVKFHPN--SN 451
Query: 233 LVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
+ D + +RLW R S V+ F GH V+ +++ PN YL + +D R W
Sbjct: 452 YIATGSTDKT--VRLWSTRQGAS-VRLFTGHRGPVLTLAFSPN-GKYLASAGEDQRLKLW 507
Query: 293 DTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
D SG + +L T+ + + + +++++S D + +++I
Sbjct: 508 DLASGGLFKDLRGHTDTISSLS-FSQDSSLVASASMDNTVRVWDI 551
>UNIPROTKB|Q9NRL3 [details] [associations]
symbol:STRN4 "Striatin-4" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0051721 "protein phosphatase 2A
binding" evidence=IDA] [GO:0000159 "protein phosphatase type 2A
complex" evidence=IDA] [GO:0070016 "armadillo repeat domain
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005516 GO:GO:0051721
InterPro:IPR013258 Pfam:PF08232 HOGENOM:HOG000236343
HOVERGEN:HBG007117 EMBL:AF212940 EMBL:BC004910 EMBL:BC034604
IPI:IPI00003016 RefSeq:NP_001034966.1 RefSeq:NP_037535.2
UniGene:Hs.631590 ProteinModelPortal:Q9NRL3 SMR:Q9NRL3
IntAct:Q9NRL3 MINT:MINT-1371553 STRING:Q9NRL3 PhosphoSite:Q9NRL3
DMDM:152031693 PaxDb:Q9NRL3 PRIDE:Q9NRL3 Ensembl:ENST00000263280
GeneID:29888 KEGG:hsa:29888 UCSC:uc002pfl.3 CTD:29888
GeneCards:GC19M047222 H-InvDB:HIX0096898 HGNC:HGNC:15721
HPA:HPA043527 MIM:614767 neXtProt:NX_Q9NRL3 PharmGKB:PA134863218
PhylomeDB:Q9NRL3 ChiTaRS:STRN4 GenomeRNAi:29888 NextBio:52431
PMAP-CutDB:Q9NRL3 ArrayExpress:Q9NRL3 Bgee:Q9NRL3 CleanEx:HS_STRN4
Genevestigator:Q9NRL3 GermOnline:ENSG00000090372 Uniprot:Q9NRL3
Length = 753
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 64/225 (28%), Positives = 102/225 (45%)
Query: 88 AGGLVDGSIDIWNPLSLISSGETGGNP-LIAH-LSRHKGPVRGLEFNSFTPNLLASGADD 145
+GG D I W L G +P +++H L H V GL F+ T LAS + D
Sbjct: 508 SGG-ADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSP-TSQRLASCSAD 565
Query: 146 GEICIWD--LSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDL 203
G + IWD S+PA FP +G ++F S ++ HI+AS +G TV++D+
Sbjct: 566 GTVRIWDPSSSSPACLCTFPTASEHGVPTS--VAFTS--TEPAHIVASFR-SGDTVLYDM 620
Query: 204 KKQKPVISFSESIKRRCSVLQWNPDVA---TQLVVASDEDSSPALRLWDMRNTMSPVKEF 260
+ +++ ES + Q N V+ L + + +D +R D R T PV
Sbjct: 621 EVGSALLTL-ES-RGSSGPTQINQVVSHPNQPLTITAHDDRG--IRFLDNR-TGKPVHSM 675
Query: 261 VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA 305
V H V ++ PN ++L++ + D W + V E+ A
Sbjct: 676 VAHLDAVTCLAVDPN-GAFLMSGSHDCSLRLWSLDNKTCVQEITA 719
>UNIPROTKB|F8VYA6 [details] [associations]
symbol:STRN4 "Striatin-4" species:9606 "Homo sapiens"
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0043197
"dendritic spine" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043197 InterPro:IPR013258 Pfam:PF08232
EMBL:AC008622 EMBL:AC008635 RefSeq:NP_001034966.1 UniGene:Hs.631590
GeneID:29888 KEGG:hsa:29888 CTD:29888 HGNC:HGNC:15721 ChiTaRS:STRN4
GenomeRNAi:29888 NextBio:52431 OMA:RPHEGSF IPI:IPI00741970
ProteinModelPortal:F8VYA6 SMR:F8VYA6 PRIDE:F8VYA6
Ensembl:ENST00000391910 UCSC:uc002pfm.3 ArrayExpress:F8VYA6
Bgee:F8VYA6 Uniprot:F8VYA6
Length = 760
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 64/225 (28%), Positives = 102/225 (45%)
Query: 88 AGGLVDGSIDIWNPLSLISSGETGGNP-LIAH-LSRHKGPVRGLEFNSFTPNLLASGADD 145
+GG D I W L G +P +++H L H V GL F+ T LAS + D
Sbjct: 515 SGG-ADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSP-TSQRLASCSAD 572
Query: 146 GEICIWD--LSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDL 203
G + IWD S+PA FP +G ++F S ++ HI+AS +G TV++D+
Sbjct: 573 GTVRIWDPSSSSPACLCTFPTASEHGVPTS--VAFTS--TEPAHIVASFR-SGDTVLYDM 627
Query: 204 KKQKPVISFSESIKRRCSVLQWNPDVA---TQLVVASDEDSSPALRLWDMRNTMSPVKEF 260
+ +++ ES + Q N V+ L + + +D +R D R T PV
Sbjct: 628 EVGSALLTL-ES-RGSSGPTQINQVVSHPNQPLTITAHDDRG--IRFLDNR-TGKPVHSM 682
Query: 261 VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA 305
V H V ++ PN ++L++ + D W + V E+ A
Sbjct: 683 VAHLDAVTCLAVDPN-GAFLMSGSHDCSLRLWSLDNKTCVQEITA 726
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 50/222 (22%), Positives = 89/222 (40%)
Query: 95 SIDIWNPLSLISSGET--GGNPLIAHLSRHKGPVRGLEFNSFTPN--LLASGADDGEICI 150
S+D N + ++ + P+ S G + +F+P+ LASG+ D + +
Sbjct: 86 SVDTENVIDIVYQPQAVFKVRPVTRCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRL 145
Query: 151 WDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVI 210
WDL+ E HF G+ + + VSW + LAS G+ ++WD + +
Sbjct: 146 WDLNT--ETPHFT-CTGH----KQWVLCVSWAPDGKR-LASGCKAGSIIIWDPETGQQKG 197
Query: 211 SFSESIKRRCSVLQWNP---DVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGV 267
K+ + L W P D + + ++ D R+WD++ + GHT V
Sbjct: 198 RPLSGHKKHINCLAWEPYHRDPECRKLASASGDGD--CRIWDVKLGQC-LMNIAGHTNAV 254
Query: 268 IAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNW 309
A+ W + + T +KD W G + +W
Sbjct: 255 TAVRW--GGAGLIYTSSKDRTVKMWRAADGILCRTFSGHAHW 294
Score = 109 (43.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 32/129 (24%), Positives = 62/129 (48%)
Query: 189 LASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLW 248
L S S + T +W + K V + + + ++++PDV +L+ ++ D S +RLW
Sbjct: 348 LVSCSDDNTLYLWRNNQNKCVERMTGH-QNVVNDVKYSPDV--KLIASASFDKS--VRLW 402
Query: 249 DMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTN 308
+ + F GH + V ++W DS +++ +KD+ W + ++ ELP +
Sbjct: 403 RASDGQY-MATFRGHVQAVYTVAWSA-DSRLIVSGSKDSTLKVWSVQTKKLAQELPGHAD 460
Query: 309 WNFDIHWYP 317
F + W P
Sbjct: 461 EVFGVDWAP 469
Score = 103 (41.3 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 29/120 (24%), Positives = 61/120 (50%)
Query: 173 QGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQ 232
Q ++ V ++ V+ ++AS S++ + +W + + +F ++ +V W+ D ++
Sbjct: 375 QNVVNDVKYSPDVK-LIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVA-WSAD--SR 430
Query: 233 LVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292
L+V+ +DS+ L++W ++ T +E GH V + W P D S + + KD W
Sbjct: 431 LIVSGSKDST--LKVWSVQ-TKKLAQELPGHADEVFGVDWAP-DGSRVASGGKDKVIKLW 486
Score = 77 (32.2 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 25/71 (35%), Positives = 35/71 (49%)
Query: 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF--TPNL--LASG 142
+A G GSI IW+P +G+ G PL S HK + L + + P LAS
Sbjct: 176 LASGCKAGSIIIWDP----ETGQQKGRPL----SGHKKHINCLAWEPYHRDPECRKLASA 227
Query: 143 ADDGEICIWDL 153
+ DG+ IWD+
Sbjct: 228 SGDGDCRIWDV 238
Score = 38 (18.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 12 SVAFAPDAPYMAAGT 26
S+ F+PD ++A+G+
Sbjct: 124 SLNFSPDGAHLASGS 138
>DICTYBASE|DDB_G0274279 [details] [associations]
symbol:tssc1 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0274279 GO:GO:0045335 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000151_GR EMBL:AAFI02000012 eggNOG:NOG314403
RefSeq:XP_643981.1 ProteinModelPortal:Q86A97 STRING:Q86A97
PRIDE:Q86A97 EnsemblProtists:DDB0234267 GeneID:8619407
KEGG:ddi:DDB_G0274279 OMA:RINESMD ProtClustDB:CLSZ2729203
Uniprot:Q86A97
Length = 400
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 44/180 (24%), Positives = 75/180 (41%)
Query: 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWD-LSAPAEPSHFPPLRGNGSAAQGEIS 177
L H G ++ + + N DD I +W + EP+ GN S ++S
Sbjct: 136 LKGHTGIIKPILCDPSGSNNFIISLDDSNIRLWSKIDDQNEPTVIKQF-GNLS----KLS 190
Query: 178 FVSWNSKVQHILASTSYNGTTVV-WDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVA 236
S N + + LA+ N + WD + K S ++ + + +NP+ L+ A
Sbjct: 191 VGSINPNISNQLATA--NDVNIKGWDFRNAKETFSMDKAHSEQIRDIDFNPNKPYYLLSA 248
Query: 237 SDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296
D+ L++WD R T PVK F GH + + + ++T + DN W+ S
Sbjct: 249 GDDCK---LKIWDTRQTRDPVKIFSGHNHWIWSAKFNRYHDQLIITSSSDNTVKLWNLYS 305
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 69/284 (24%), Positives = 127/284 (44%)
Query: 60 ESPSSERFNRLAWGKNGSGSEDFSLGL--VAGGLVDGSIDIWNPLSLISSGETGGNPLIA 117
E PS ER ++ S DFSL +A G +D + +W+ + G
Sbjct: 7 EDPSLER--HFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAG----- 59
Query: 118 HLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEIS 177
HK V + F+ + +LLASG+ D + IW + E + F R + +A +
Sbjct: 60 ----HKDAVTCVNFSP-SGHLLASGSRDKTVRIWIPNVKGESTVF---RAH-TATVRSVH 110
Query: 178 FVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVA 236
F S L + S + T VW +QK + S S+ I RC+ +++PD +L+V+
Sbjct: 111 FCSDGQS----LVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCA--RFSPD--GRLIVS 162
Query: 237 SDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296
+ +D + ++LWD + + V + H V + + P+ + + + DN WD +
Sbjct: 163 ASDDKT--VKLWD-KTSRECVHSYCEHGGFVTYVDFHPSGTC-IAAASMDNTVKVWDVRT 218
Query: 297 GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI-EG 339
++ + + ++P +++ASS D + I ++ EG
Sbjct: 219 HRLLQHYQLHSAAVNALSFHPSGNYLLTASS-DSTLKILDLMEG 261
>POMBASE|SPAC821.08c [details] [associations]
symbol:slp1 "sleepy homolog Slp1" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IGI] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0007092 "activation of mitotic
anaphase-promoting complex activity" evidence=TAS] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=IGI] [GO:0010997
"anaphase-promoting complex binding" evidence=IPI] [GO:0031577
"spindle checkpoint" evidence=IPI] [GO:0032153 "cell division site"
evidence=IDA] [GO:0033314 "mitotic DNA replication checkpoint"
evidence=IGI] [GO:0033597 "mitotic checkpoint complex"
evidence=IDA] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC821.08c EMBL:CU329670 GO:GO:0034613
GO:GO:0051301 GenomeReviews:CU329670_GR GO:GO:0007094
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0032153 GO:GO:0044732 eggNOG:COG2319
GO:GO:0000070 GO:GO:0000778 GO:GO:0007092 GO:GO:0033314
GO:GO:0033597 KO:K03363 HOGENOM:HOG000195514 OrthoDB:EOG4KD9V8
PDB:4AEZ PDBsum:4AEZ EMBL:U77983 PIR:T41719 RefSeq:NP_593161.1
ProteinModelPortal:P78972 DIP:DIP-38036N IntAct:P78972
STRING:P78972 EnsemblFungi:SPAC821.08c.1 GeneID:2543222
KEGG:spo:SPAC821.08c OMA:GINTSSH NextBio:20804244 Uniprot:P78972
Length = 488
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 48/203 (23%), Positives = 90/203 (44%)
Query: 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG 196
+ L+ G +G + I+D+ + + LR + Q + +SWN +H+L+S S +G
Sbjct: 234 SFLSVGLGNGLVDIYDVESQTK------LR-TMAGHQARVGCLSWN---RHVLSSGSRSG 283
Query: 197 TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSP 256
D++ I + L W D QL +++ +++WD R+++ P
Sbjct: 284 AIHHHDVRIANHQIGTLQGHSSEVCGLAWRSD-GLQLASGGNDN---VVQIWDARSSI-P 338
Query: 257 VKEFVGHTKGVIAMSWCPNDSSYLLTCA--KDNRTICWDTVSGEIVSELPAGTNWNFDIH 314
H V A++WCP S+ L T D + W+ +G V+ + AG+ +
Sbjct: 339 KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVT-SLI 397
Query: 315 WYPKIPGVISASSF-DGKIGIYN 336
W P ++S F D + I++
Sbjct: 398 WSPHSKEIMSTHGFPDNNLSIWS 420
>POMBASE|SPBC32F12.02 [details] [associations]
symbol:rec14 "Ski complex subunit Rec14" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0055087 "Ski complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC32F12.02 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0006402 GO:GO:0007131 EMBL:U39144
PIR:T40226 RefSeq:NP_596145.1 ProteinModelPortal:Q09150
STRING:Q09150 EnsemblFungi:SPBC32F12.02.1 GeneID:2540221
KEGG:spo:SPBC32F12.02 HOGENOM:HOG000208957 KO:K12601 OMA:RNCVATH
OrthoDB:EOG4SJ8PN NextBio:20801353 GO:GO:0055087 Uniprot:Q09150
Length = 302
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 68/294 (23%), Positives = 128/294 (43%)
Query: 74 KNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR-HKGPVRGLEFN 132
+N ++ +SL +VAG L S D + + S G+ + L+ + HK V L
Sbjct: 12 ENAHQADIYSLNVVAGNLWSASGD--SKIKKWSIGDAE-HSLVEEIDTPHKLGVHHLA-T 67
Query: 133 SFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQ---HIL 189
S N++ S ++ +W+ P E + F L GN + E W+S + +
Sbjct: 68 SLDENVVVSCGFGQDVYVWN---P-ETNEFRDL-GNNAQHPSEC----WSSCISPDGQTI 118
Query: 190 ASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWD 249
A TS +G VWD + K + ++P+ + +V+ + L +
Sbjct: 119 AFTSVDGRIAVWDNPSDCKISELDTKGKFGLCI-DYSPN--GRFIVSGHQTGQLFLISTE 175
Query: 250 MRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC-WDTVSGEIVSELPAGTN 308
+ GHT V ++++ P S LL A D++ I +D +SG+ V +L
Sbjct: 176 TGRLFHVLS---GHTSPVRSVAFSPG--STLLAAAGDSKMITIYDVLSGDQVGQLRGHAA 230
Query: 309 WNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYK 362
W F + + P + ++ ++ +GKI I++I+ + + + + + A WYK
Sbjct: 231 WIFAVAFNP-VGDLLLSADVEGKIKIWDID--TMECISTQSETDGAIWAVAWYK 281
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 60/260 (23%), Positives = 104/260 (40%)
Query: 82 FSLGLVAGGLVDGSIDIWNPLSLISSGE--TGGNPLIAHLSRHKGPVRGLEFNS-FTPNL 138
++ + A DGS+ IW L S+ T PLI L HK V L++ + +
Sbjct: 81 YAADIAATASGDGSLQIWCGLDGESASNQLTPKQPLIC-LQEHKNEVYSLDWGEKWNYHT 139
Query: 139 LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198
L SG+ D + +WD + + F G+ G ++ + ++ AS S +G
Sbjct: 140 LLSGSWDCTLKLWDCNRQNSITTFV---GHNDLIYG----AKFSPLIANLFASVSTDGHL 192
Query: 199 VVWDLKK--QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSP 256
+W+ KP++S E+ W+ LV S +R WD+R +
Sbjct: 193 NLWNSLDFAGKPLMSI-EAHASEALCCDWSHFDRNVLVTGG---SDGLIRGWDLRKMRTH 248
Query: 257 VKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAG-TNWNFDIHW 315
V E V ++ P+ ++ L + D T W+ GE E+ A T + + W
Sbjct: 249 VFELYSGEFAVRRLACSPHSAAVLASANYDFTTRIWNLERGESAQEVNARHTEFVCGLDW 308
Query: 316 YPKIPGVISASSFDGKIGIY 335
P ++ +D +Y
Sbjct: 309 NPHRTHQLADCGWDSLANVY 328
>TAIR|locus:2153914 [details] [associations]
symbol:TTG1 "AT5G24520" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0010026 "trichome
differentiation" evidence=IMP] [GO:0045165 "cell fate commitment"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032880 "regulation of protein localization"
evidence=RCA;IMP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0009957
"epidermal cell fate specification" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009733 GO:GO:0009723 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0032880
EMBL:AB010068 eggNOG:NOG314410 HOGENOM:HOG000260968 GO:GO:0009957
GO:GO:0010026 ProtClustDB:CLSN2682478 EMBL:AJ133743 EMBL:AJ251522
EMBL:AJ251523 EMBL:BT020231 EMBL:BT020513 EMBL:AK227211
IPI:IPI00520475 RefSeq:NP_197840.1 RefSeq:NP_851069.1
RefSeq:NP_851070.1 UniGene:At.28124 ProteinModelPortal:Q9XGN1
SMR:Q9XGN1 IntAct:Q9XGN1 STRING:Q9XGN1 PaxDb:Q9XGN1 PRIDE:Q9XGN1
EnsemblPlants:AT5G24520.1 EnsemblPlants:AT5G24520.2
EnsemblPlants:AT5G24520.3 GeneID:832523 KEGG:ath:AT5G24520
GeneFarm:3759 TAIR:At5g24520 InParanoid:Q9XGN1 OMA:RACANAV
PhylomeDB:Q9XGN1 Genevestigator:Q9XGN1 GermOnline:AT5G24520
Uniprot:Q9XGN1
Length = 341
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 49/222 (22%), Positives = 92/222 (41%)
Query: 125 PVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK 184
P+ ++N P L + + D IWD+ + A E+ ++W
Sbjct: 134 PLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQL-------IAHDKEVHDIAWGEA 186
Query: 185 VQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQ--WNP-DVATQLVVASDEDS 241
+ AS S +G+ ++DL+ ++ ES + +L+ WN D+ + D +
Sbjct: 187 --RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK 244
Query: 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD--TVSG-- 297
L D+R+ PV E H V A++W P ++ + D + + W+ TV+G
Sbjct: 245 VVIL---DIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPN 301
Query: 298 --EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337
+ +S AG+ N + W P I + F K+ + +
Sbjct: 302 GIDPMSVYSAGSEIN-QLQWSSSQPDWIGIA-FANKMQLLRV 341
>GENEDB_PFALCIPARUM|PFL2460w [details] [associations]
symbol:PFL2460w "coronin" species:5833
"Plasmodium falciparum" [GO:0006928 "cellular component movement"
evidence=ISS] [GO:0000910 "cytokinesis" evidence=ISS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0003779 "actin
binding" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0003779 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006928 GO:GO:0000910
EMBL:AE014188 GO:GO:0007017 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
RefSeq:XP_001350896.1 ProteinModelPortal:Q8I4S2 PRIDE:Q8I4S2
EnsemblProtists:PFL2460w:mRNA GeneID:811544 KEGG:pfa:PFL2460w
EuPathDB:PlasmoDB:PF3D7_1251200 OMA:CEDVEIC ProtClustDB:PTZ00420
Uniprot:Q8I4S2
Length = 602
Score = 143 (55.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 35/117 (29%), Positives = 62/117 (52%)
Query: 113 NPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF---PPLRGNG 169
NP + L H P+ L FN +LAS ++D I IW++ E + P NG
Sbjct: 64 NPPVIKLKSHTSPILDLSFNPCYSEILASCSEDMSIRIWEIRHEDENVNEVKDPLCILNG 123
Query: 170 SAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWN 226
+ +++ +SWN IL+STS++ + +WD++ +K +F ++ ++ S LQW+
Sbjct: 124 H--KKKVNILSWNPMNYFILSSTSFDSSVNIWDIENEKK--AFEINMPKKLSSLQWD 176
Score = 40 (19.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 9/43 (20%), Positives = 23/43 (53%)
Query: 635 NPAKKREIEDNSRKIGALFAKLNSGDISKNAADKLV--QLCQA 675
N + E E++ + I ++ + N + KN D ++ ++C++
Sbjct: 555 NTLQSEENEEHLKHISSIHEENNFKNFFKNVLDNILDMKMCKS 597
WARNING: HSPs involving 248 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 719 693 0.00081 121 3 11 23 0.45 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 498
No. of states in DFA: 628 (67 KB)
Total size of DFA: 392 KB (2189 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 73.61u 0.11s 73.72t Elapsed: 00:00:04
Total cpu time: 73.70u 0.11s 73.81t Elapsed: 00:00:04
Start: Sat May 11 12:31:03 2013 End: Sat May 11 12:31:07 2013
WARNINGS ISSUED: 2