Query 046451
Match_columns 719
No_of_seqs 951 out of 3629
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 12:15:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046451.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046451hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0307 Vesicle coat complex C 100.0 5.7E-74 1.2E-78 632.3 52.1 369 2-382 1-379 (1049)
2 KOG0271 Notchless-like WD40 re 100.0 4.5E-45 9.7E-50 358.3 25.5 294 5-344 113-445 (480)
3 KOG0272 U4/U6 small nuclear ri 100.0 3.6E-42 7.7E-47 342.6 23.3 287 4-336 172-458 (459)
4 KOG0271 Notchless-like WD40 re 100.0 6.6E-41 1.4E-45 329.1 26.5 315 60-408 111-466 (480)
5 KOG0272 U4/U6 small nuclear ri 100.0 2.7E-40 5.9E-45 329.2 22.0 272 61-407 172-444 (459)
6 KOG0286 G-protein beta subunit 100.0 1.9E-37 4.1E-42 295.6 29.6 289 5-336 53-343 (343)
7 KOG0284 Polyadenylation factor 100.0 9.2E-37 2E-41 302.6 18.5 284 7-339 96-381 (464)
8 KOG0273 Beta-transducin family 100.0 2E-35 4.3E-40 298.0 28.3 322 5-383 176-515 (524)
9 KOG0315 G-protein beta subunit 100.0 2.5E-34 5.5E-39 268.2 28.2 278 20-344 11-294 (311)
10 KOG0279 G protein beta subunit 100.0 4.6E-34 9.9E-39 271.1 29.2 291 5-339 13-314 (315)
11 KOG0273 Beta-transducin family 100.0 9.4E-34 2E-38 285.9 30.4 282 6-338 234-523 (524)
12 KOG0277 Peroxisomal targeting 100.0 1.2E-34 2.5E-39 271.4 21.8 294 10-337 11-308 (311)
13 KOG0279 G protein beta subunit 100.0 2.9E-33 6.3E-38 265.6 27.6 290 60-379 11-301 (315)
14 KOG0645 WD40 repeat protein [G 100.0 9.6E-33 2.1E-37 261.0 29.6 289 5-338 12-311 (312)
15 KOG0286 G-protein beta subunit 100.0 1.1E-32 2.4E-37 263.0 29.4 257 60-344 51-309 (343)
16 KOG0319 WD40-repeat-containing 100.0 1.5E-33 3.3E-38 298.4 26.0 365 3-406 101-602 (775)
17 KOG0263 Transcription initiati 100.0 8.7E-34 1.9E-38 303.7 23.0 258 61-343 375-654 (707)
18 KOG0265 U5 snRNP-specific prot 100.0 1.8E-32 3.9E-37 262.7 27.6 290 1-337 41-337 (338)
19 KOG0295 WD40 repeat-containing 100.0 1.1E-32 2.4E-37 270.2 23.7 285 6-337 107-405 (406)
20 KOG0284 Polyadenylation factor 100.0 2.8E-33 6E-38 277.9 19.0 292 61-386 93-384 (464)
21 KOG0291 WD40-repeat-containing 100.0 9.4E-32 2E-36 284.8 31.3 329 8-384 266-605 (893)
22 KOG0291 WD40-repeat-containing 100.0 3.1E-31 6.7E-36 280.9 34.8 358 5-407 94-492 (893)
23 KOG0266 WD40 repeat-containing 100.0 1.4E-31 3E-36 294.8 31.2 288 6-338 158-454 (456)
24 KOG0285 Pleiotropic regulator 100.0 3.5E-32 7.5E-37 265.6 23.2 285 5-340 149-441 (460)
25 KOG0318 WD40 repeat stress pro 100.0 2E-30 4.3E-35 265.1 36.3 366 5-407 57-501 (603)
26 KOG0263 Transcription initiati 100.0 3.7E-32 8.1E-37 291.2 24.8 257 7-296 378-650 (707)
27 KOG0293 WD40 repeat-containing 100.0 6.9E-32 1.5E-36 268.0 24.4 289 5-339 222-514 (519)
28 cd00200 WD40 WD40 domain, foun 100.0 1.1E-30 2.3E-35 268.9 34.6 283 5-336 7-289 (289)
29 PLN00181 protein SPA1-RELATED; 100.0 6.6E-31 1.4E-35 310.6 37.6 290 6-337 482-792 (793)
30 KOG0281 Beta-TrCP (transducin 100.0 5.3E-33 1.2E-37 270.0 15.0 278 7-344 197-483 (499)
31 KOG0275 Conserved WD40 repeat- 100.0 2.3E-32 4.9E-37 263.2 18.3 291 3-336 209-507 (508)
32 KOG0319 WD40-repeat-containing 100.0 1.3E-31 2.8E-36 283.9 25.5 297 7-341 323-622 (775)
33 PF07304 SRA1: Steroid recepto 100.0 3.6E-34 7.7E-39 262.5 5.3 111 602-717 32-142 (157)
34 KOG0306 WD40-repeat-containing 100.0 2.2E-31 4.8E-36 281.9 26.9 346 8-407 66-564 (888)
35 KOG0318 WD40 repeat stress pro 100.0 5.7E-30 1.2E-34 261.7 34.0 336 6-379 189-600 (603)
36 KOG0315 G-protein beta subunit 100.0 1.5E-30 3.3E-35 243.1 27.2 263 8-316 41-309 (311)
37 KOG0296 Angio-associated migra 100.0 3.8E-30 8.3E-35 252.7 30.5 285 4-338 61-398 (399)
38 KOG0285 Pleiotropic regulator 100.0 9.3E-31 2E-35 255.7 24.9 253 61-349 148-400 (460)
39 KOG0313 Microtubule binding pr 100.0 8.8E-31 1.9E-35 258.2 25.0 297 3-338 101-418 (423)
40 KOG0295 WD40 repeat-containing 100.0 7.3E-31 1.6E-35 257.5 21.2 253 60-345 104-371 (406)
41 KOG0265 U5 snRNP-specific prot 100.0 4.4E-30 9.5E-35 246.3 25.9 254 58-344 41-302 (338)
42 KOG0276 Vesicle coat complex C 100.0 2.6E-30 5.6E-35 268.6 25.0 282 5-332 11-293 (794)
43 KOG0282 mRNA splicing factor [ 100.0 5.4E-31 1.2E-35 267.2 19.2 286 5-336 212-503 (503)
44 KOG0281 Beta-TrCP (transducin 100.0 1E-31 2.2E-36 261.1 13.4 235 63-343 196-433 (499)
45 KOG0264 Nucleosome remodeling 100.0 3.4E-30 7.3E-35 260.5 24.5 274 55-339 115-405 (422)
46 KOG0266 WD40 repeat-containing 100.0 3.5E-29 7.6E-34 275.8 31.7 287 63-381 158-454 (456)
47 KOG0296 Angio-associated migra 100.0 4.2E-29 9E-34 245.4 26.1 314 57-407 57-382 (399)
48 KOG0276 Vesicle coat complex C 100.0 2.2E-29 4.8E-34 261.6 24.5 251 62-344 11-263 (794)
49 KOG0278 Serine/threonine kinas 100.0 6.9E-30 1.5E-34 238.6 18.1 291 2-344 9-303 (334)
50 KOG0306 WD40-repeat-containing 100.0 4.4E-29 9.5E-34 264.6 25.6 296 4-344 370-670 (888)
51 KOG0310 Conserved WD40 repeat- 100.0 4.9E-29 1.1E-33 253.6 24.8 288 4-341 23-312 (487)
52 KOG0645 WD40 repeat protein [G 100.0 4.9E-28 1.1E-32 229.2 28.7 284 60-379 10-309 (312)
53 PLN00181 protein SPA1-RELATED; 100.0 4.2E-28 9.2E-33 286.7 35.3 255 61-341 480-741 (793)
54 cd00200 WD40 WD40 domain, foun 100.0 1.6E-27 3.4E-32 245.2 33.5 250 61-344 6-255 (289)
55 KOG0292 Vesicle coat complex C 100.0 1.5E-28 3.2E-33 264.1 26.0 288 6-341 8-324 (1202)
56 KOG0772 Uncharacterized conser 100.0 1.1E-28 2.4E-33 251.4 23.3 309 7-342 167-491 (641)
57 KOG0292 Vesicle coat complex C 100.0 1.4E-28 3.1E-33 264.2 24.6 250 62-344 7-286 (1202)
58 KOG0316 Conserved WD40 repeat- 100.0 4.6E-28 1E-32 224.7 24.1 280 6-339 16-300 (307)
59 KOG0316 Conserved WD40 repeat- 100.0 3E-28 6.6E-33 225.9 22.2 250 61-348 14-267 (307)
60 KOG0283 WD40 repeat-containing 100.0 3E-28 6.6E-33 263.6 24.7 300 5-342 265-580 (712)
61 KOG0277 Peroxisomal targeting 100.0 8.7E-29 1.9E-33 232.0 17.5 247 7-294 60-308 (311)
62 KOG0282 mRNA splicing factor [ 100.0 4.4E-29 9.5E-34 253.4 16.5 288 58-379 208-503 (503)
63 KOG0641 WD40 repeat protein [G 100.0 1.2E-26 2.7E-31 213.6 30.2 301 4-338 29-349 (350)
64 KOG0640 mRNA cleavage stimulat 100.0 4E-28 8.7E-33 233.1 20.7 296 5-338 110-426 (430)
65 KOG0973 Histone transcription 100.0 7.6E-28 1.7E-32 266.6 25.9 306 8-342 14-359 (942)
66 PTZ00421 coronin; Provisional 100.0 1.2E-26 2.6E-31 254.8 34.9 309 7-340 20-333 (493)
67 KOG1407 WD40 repeat protein [F 100.0 1.3E-26 2.9E-31 218.2 28.0 285 5-338 18-311 (313)
68 KOG0274 Cdc4 and related F-box 100.0 7.3E-27 1.6E-31 256.7 27.2 281 6-344 207-488 (537)
69 KOG0313 Microtubule binding pr 100.0 1.4E-26 3E-31 228.7 25.9 288 58-381 99-418 (423)
70 KOG0288 WD40 repeat protein Ti 100.0 1.3E-27 2.9E-32 238.0 18.9 280 6-336 174-459 (459)
71 KOG0293 WD40 repeat-containing 100.0 4.9E-27 1.1E-31 233.6 22.8 290 61-382 221-514 (519)
72 KOG0305 Anaphase promoting com 100.0 1.2E-26 2.7E-31 245.5 26.8 280 12-340 182-463 (484)
73 KOG0268 Sof1-like rRNA process 100.0 1.1E-27 2.4E-32 234.8 16.5 286 5-344 64-351 (433)
74 KOG1407 WD40 repeat protein [F 100.0 1.2E-26 2.6E-31 218.6 22.0 282 60-386 16-297 (313)
75 KOG1446 Histone H3 (Lys4) meth 100.0 1.3E-25 2.9E-30 217.9 29.9 283 7-341 14-306 (311)
76 KOG0643 Translation initiation 100.0 3.1E-26 6.7E-31 216.4 24.0 246 60-339 6-318 (327)
77 KOG0264 Nucleosome remodeling 99.9 2.4E-26 5.2E-31 232.7 24.1 265 3-295 120-404 (422)
78 KOG1446 Histone H3 (Lys4) meth 99.9 6.3E-25 1.4E-29 213.3 31.9 280 63-380 13-301 (311)
79 PTZ00421 coronin; Provisional 99.9 6.9E-25 1.5E-29 240.9 33.5 220 117-344 69-296 (493)
80 KOG0289 mRNA splicing factor [ 99.9 1.9E-25 4.1E-30 223.9 25.9 284 7-337 219-505 (506)
81 KOG0275 Conserved WD40 repeat- 99.9 2.8E-26 6.1E-31 221.3 18.9 291 61-379 210-507 (508)
82 KOG0305 Anaphase promoting com 99.9 1.2E-25 2.6E-30 238.1 24.1 245 7-297 217-463 (484)
83 PTZ00420 coronin; Provisional 99.9 8.7E-25 1.9E-29 241.0 31.6 235 90-342 50-297 (568)
84 KOG0299 U3 snoRNP-associated p 99.9 3.7E-25 8E-30 223.8 25.8 299 4-338 139-456 (479)
85 KOG0647 mRNA export protein (c 99.9 7.1E-25 1.5E-29 210.7 25.3 275 7-329 27-315 (347)
86 KOG0639 Transducin-like enhanc 99.9 1.8E-25 3.9E-30 227.1 20.6 291 2-338 414-704 (705)
87 KOG0308 Conserved WD40 repeat- 99.9 1.8E-25 3.9E-30 234.1 20.9 296 12-342 29-331 (735)
88 KOG0310 Conserved WD40 repeat- 99.9 5.5E-25 1.2E-29 224.2 23.7 275 62-383 24-301 (487)
89 KOG0288 WD40 repeat protein Ti 99.9 7.8E-26 1.7E-30 225.5 16.8 267 61-363 172-442 (459)
90 KOG0274 Cdc4 and related F-box 99.9 6E-25 1.3E-29 241.6 25.5 282 63-389 207-490 (537)
91 KOG0294 WD40 repeat-containing 99.9 1.7E-24 3.6E-29 209.3 25.3 245 58-342 37-285 (362)
92 KOG0269 WD40 repeat-containing 99.9 2.7E-25 6E-30 237.0 21.9 318 9-378 41-365 (839)
93 KOG0640 mRNA cleavage stimulat 99.9 1E-24 2.2E-29 209.7 21.3 298 58-380 106-425 (430)
94 KOG0647 mRNA export protein (c 99.9 2.9E-24 6.2E-29 206.6 24.1 274 62-379 25-311 (347)
95 PTZ00420 coronin; Provisional 99.9 1.3E-23 2.7E-28 231.8 32.9 256 38-319 53-318 (568)
96 KOG0308 Conserved WD40 repeat- 99.9 4.3E-25 9.4E-30 231.3 20.1 238 85-339 38-286 (735)
97 KOG0270 WD40 repeat-containing 99.9 5E-24 1.1E-28 214.8 25.5 310 13-344 131-455 (463)
98 KOG1332 Vesicle coat complex C 99.9 1.6E-24 3.4E-29 202.5 19.6 256 61-339 8-287 (299)
99 KOG0643 Translation initiation 99.9 9.8E-24 2.1E-28 199.6 25.1 273 118-409 5-303 (327)
100 KOG0300 WD40 repeat-containing 99.9 2.6E-24 5.6E-29 207.4 21.4 295 5-340 146-478 (481)
101 KOG1036 Mitotic spindle checkp 99.9 1.5E-23 3.3E-28 202.5 26.3 268 7-327 13-293 (323)
102 KOG0269 WD40 repeat-containing 99.9 3.8E-25 8.2E-30 236.0 16.6 252 9-298 89-343 (839)
103 KOG0772 Uncharacterized conser 99.9 2.8E-24 6.1E-29 219.4 21.6 302 60-383 163-490 (641)
104 KOG0301 Phospholipase A2-activ 99.9 9.3E-24 2E-28 223.0 26.1 278 6-341 13-291 (745)
105 KOG0307 Vesicle coat complex C 99.9 9.9E-22 2.1E-26 219.1 43.1 261 4-298 61-330 (1049)
106 KOG1036 Mitotic spindle checkp 99.9 1.6E-23 3.5E-28 202.4 24.6 270 63-382 12-295 (323)
107 KOG0301 Phospholipase A2-activ 99.9 9.6E-24 2.1E-28 222.9 23.8 279 61-383 11-290 (745)
108 KOG0268 Sof1-like rRNA process 99.9 1.2E-24 2.6E-29 213.6 15.9 276 60-384 62-338 (433)
109 KOG0283 WD40 repeat-containing 99.9 1.1E-23 2.4E-28 228.4 24.8 247 118-384 261-569 (712)
110 KOG0641 WD40 repeat protein [G 99.9 7.4E-23 1.6E-27 188.7 26.5 258 6-295 88-349 (350)
111 KOG0294 WD40 repeat-containing 99.9 2.8E-23 6E-28 200.9 24.2 258 6-315 42-305 (362)
112 KOG0973 Histone transcription 99.9 2E-23 4.4E-28 231.7 26.5 302 63-383 12-357 (942)
113 KOG1007 WD repeat protein TSSC 99.9 3.4E-23 7.4E-28 197.7 24.3 296 21-339 28-362 (370)
114 KOG0299 U3 snoRNP-associated p 99.9 2.1E-23 4.5E-28 211.1 24.0 283 60-379 138-443 (479)
115 KOG0300 WD40 repeat-containing 99.9 1.4E-23 3.1E-28 202.2 21.2 296 60-383 144-478 (481)
116 KOG0289 mRNA splicing factor [ 99.9 7.9E-23 1.7E-27 205.2 26.1 246 64-342 219-466 (506)
117 KOG0278 Serine/threonine kinas 99.9 2.2E-24 4.8E-29 201.9 12.6 245 5-299 57-301 (334)
118 KOG4283 Transcription-coupled 99.9 7.5E-23 1.6E-27 195.8 23.0 278 120-404 40-346 (397)
119 KOG0302 Ribosome Assembly prot 99.9 5E-23 1.1E-27 203.3 22.2 260 59-335 146-436 (440)
120 KOG1539 WD repeat protein [Gen 99.9 2.2E-22 4.7E-27 216.6 28.2 335 2-384 238-640 (910)
121 KOG0321 WD40 repeat-containing 99.9 6.3E-23 1.4E-27 214.8 23.4 299 12-344 54-397 (720)
122 KOG0290 Conserved WD40 repeat- 99.9 1.4E-22 3E-27 193.9 23.4 301 10-336 47-363 (364)
123 KOG2048 WD40 repeat protein [G 99.9 7.1E-22 1.5E-26 208.6 30.7 284 8-339 26-320 (691)
124 KOG2096 WD40 repeat protein [G 99.9 1.8E-22 4E-27 195.1 24.0 324 41-397 63-410 (420)
125 KOG2055 WD40 repeat protein [G 99.9 2.2E-22 4.7E-27 203.6 24.6 289 7-338 213-512 (514)
126 KOG4328 WD40 protein [Function 99.9 2.9E-22 6.2E-27 202.6 24.3 299 63-383 185-497 (498)
127 KOG1408 WD40 repeat protein [F 99.9 2.4E-22 5.3E-27 211.8 24.7 252 62-343 457-718 (1080)
128 KOG1273 WD40 repeat protein [G 99.9 1.3E-21 2.7E-26 189.2 26.4 285 10-339 26-323 (405)
129 KOG2919 Guanine nucleotide-bin 99.9 5.8E-22 1.3E-26 192.2 24.0 296 8-331 50-363 (406)
130 KOG1274 WD40 repeat protein [G 99.9 1E-21 2.3E-26 213.7 28.2 278 3-334 9-296 (933)
131 KOG0270 WD40 repeat-containing 99.9 1.5E-22 3.3E-27 204.1 20.0 245 19-300 192-454 (463)
132 KOG2096 WD40 repeat protein [G 99.9 1.6E-21 3.5E-26 188.6 26.0 291 6-336 85-400 (420)
133 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 4E-21 8.7E-26 201.0 30.9 273 20-344 2-285 (300)
134 KOG0639 Transducin-like enhanc 99.9 2.5E-22 5.3E-27 204.4 20.5 280 58-381 413-694 (705)
135 KOG4378 Nuclear protein COP1 [ 99.9 3.9E-22 8.5E-27 202.8 21.3 274 38-344 11-286 (673)
136 KOG0267 Microtubule severing p 99.9 1.8E-23 3.8E-28 221.6 11.9 234 62-329 26-259 (825)
137 KOG2445 Nuclear pore complex c 99.9 2.2E-21 4.8E-26 187.2 24.9 264 61-340 10-320 (361)
138 KOG4328 WD40 protein [Function 99.9 1.4E-21 3.1E-26 197.6 24.4 294 6-339 185-496 (498)
139 KOG0267 Microtubule severing p 99.9 1.5E-23 3.3E-28 222.0 10.6 255 86-383 6-260 (825)
140 KOG0302 Ribosome Assembly prot 99.9 5.8E-22 1.3E-26 195.8 20.7 258 1-292 145-435 (440)
141 KOG0646 WD40 repeat protein [G 99.9 5.7E-22 1.2E-26 201.2 20.1 269 38-337 60-349 (476)
142 KOG4283 Transcription-coupled 99.9 3.5E-21 7.7E-26 184.4 24.2 298 5-344 41-371 (397)
143 KOG1445 Tumor-specific antigen 99.9 3.2E-21 7E-26 200.9 25.9 172 218-403 628-814 (1012)
144 KOG2106 Uncharacterized conser 99.9 1.7E-20 3.7E-25 191.5 29.5 306 8-369 201-543 (626)
145 KOG4378 Nuclear protein COP1 [ 99.9 3.4E-21 7.4E-26 196.0 21.3 269 9-319 36-305 (673)
146 KOG1332 Vesicle coat complex C 99.9 3.1E-21 6.7E-26 180.6 18.8 255 5-295 9-286 (299)
147 KOG1274 WD40 repeat protein [G 99.9 2.8E-20 6.1E-25 202.7 29.0 244 61-339 10-263 (933)
148 KOG1539 WD repeat protein [Gen 99.9 5.3E-20 1.1E-24 198.4 30.6 344 20-407 173-590 (910)
149 KOG0650 WD40 repeat nucleolar 99.9 7.3E-21 1.6E-25 197.8 23.2 294 2-335 395-732 (733)
150 KOG1063 RNA polymerase II elon 99.9 2.9E-20 6.2E-25 196.7 26.6 344 5-383 189-650 (764)
151 KOG1034 Transcriptional repres 99.9 9.3E-21 2E-25 184.4 21.0 296 6-338 37-383 (385)
152 KOG1408 WD40 repeat protein [F 99.9 4.5E-21 9.7E-26 202.4 20.2 254 6-296 458-714 (1080)
153 KOG2106 Uncharacterized conser 99.9 1.6E-19 3.5E-24 184.5 30.3 352 4-407 101-505 (626)
154 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 1.4E-19 3E-24 189.3 30.9 287 85-402 2-299 (300)
155 KOG2445 Nuclear pore complex c 99.9 4.6E-20 9.9E-25 178.2 24.3 287 5-316 11-341 (361)
156 KOG0646 WD40 repeat protein [G 99.9 4.9E-20 1.1E-24 187.3 24.3 233 86-344 53-313 (476)
157 KOG1063 RNA polymerase II elon 99.9 8.4E-20 1.8E-24 193.2 26.5 304 4-341 264-651 (764)
158 KOG2055 WD40 repeat protein [G 99.9 9.3E-20 2E-24 184.7 23.1 285 62-384 211-505 (514)
159 KOG1007 WD repeat protein TSSC 99.9 6.6E-20 1.4E-24 175.4 20.4 275 92-378 38-358 (370)
160 KOG1273 WD40 repeat protein [G 99.8 1.2E-19 2.6E-24 175.6 21.2 286 62-381 22-322 (405)
161 KOG1009 Chromatin assembly com 99.8 1.9E-19 4.2E-24 179.9 22.2 308 6-343 12-377 (434)
162 KOG0321 WD40 repeat-containing 99.8 1.8E-19 3.9E-24 189.1 22.2 268 4-297 97-393 (720)
163 KOG2048 WD40 repeat protein [G 99.8 1.4E-18 3E-23 184.0 28.5 247 63-342 24-279 (691)
164 KOG1538 Uncharacterized conser 99.8 4.6E-19 1E-23 185.9 23.2 283 5-344 10-299 (1081)
165 KOG1587 Cytoplasmic dynein int 99.8 1.6E-18 3.5E-23 189.3 27.8 317 6-344 179-522 (555)
166 KOG0290 Conserved WD40 repeat- 99.8 1.6E-18 3.4E-23 166.2 21.1 264 63-342 43-322 (364)
167 KOG2919 Guanine nucleotide-bin 99.8 3.8E-18 8.1E-23 165.9 23.9 297 65-383 50-371 (406)
168 KOG4227 WD40 repeat protein [G 99.8 3.7E-18 7.9E-23 169.2 22.0 296 4-338 53-387 (609)
169 KOG1188 WD40 repeat protein [G 99.8 3.9E-18 8.4E-23 167.3 20.8 279 20-340 41-348 (376)
170 KOG0303 Actin-binding protein 99.8 3.9E-18 8.4E-23 169.8 20.1 239 92-344 55-300 (472)
171 KOG0303 Actin-binding protein 99.8 1.2E-17 2.6E-22 166.4 23.5 239 61-319 78-321 (472)
172 COG2319 FOG: WD40 repeat [Gene 99.8 3.5E-16 7.6E-21 169.8 37.5 293 4-341 62-362 (466)
173 KOG0649 WD40 repeat protein [G 99.8 2.5E-17 5.3E-22 154.3 23.7 284 6-336 9-314 (325)
174 KOG0642 Cell-cycle nuclear pro 99.8 1.4E-18 3E-23 180.5 16.9 267 60-344 290-567 (577)
175 KOG0322 G-protein beta subunit 99.8 2.2E-18 4.7E-23 163.3 16.4 288 5-337 12-322 (323)
176 KOG0644 Uncharacterized conser 99.8 7.7E-19 1.7E-23 188.8 14.3 288 4-344 187-474 (1113)
177 KOG0650 WD40 repeat nucleolar 99.8 9.8E-18 2.1E-22 174.8 20.5 250 60-337 396-679 (733)
178 KOG1034 Transcriptional repres 99.8 3.4E-17 7.3E-22 159.8 21.3 293 61-385 35-377 (385)
179 KOG1517 Guanine nucleotide bin 99.8 8.4E-17 1.8E-21 177.4 24.7 296 10-342 1067-1385(1387)
180 KOG1334 WD40 repeat protein [G 99.7 1.7E-17 3.8E-22 169.4 15.6 305 5-342 140-470 (559)
181 PRK11028 6-phosphogluconolacto 99.7 1.5E-15 3.4E-20 161.5 30.7 274 37-338 10-304 (330)
182 KOG1587 Cytoplasmic dynein int 99.7 2.1E-16 4.5E-21 172.9 24.4 265 7-296 242-517 (555)
183 KOG1523 Actin-related protein 99.7 3.1E-16 6.8E-21 152.8 22.5 232 7-274 10-259 (361)
184 KOG0642 Cell-cycle nuclear pro 99.7 4.2E-17 9.2E-22 169.6 17.1 273 4-307 291-573 (577)
185 KOG1963 WD40 repeat protein [G 99.7 1E-15 2.2E-20 167.4 28.3 301 6-340 204-540 (792)
186 KOG1188 WD40 repeat protein [G 99.7 3E-16 6.6E-21 154.1 21.5 276 85-380 41-345 (376)
187 KOG2110 Uncharacterized conser 99.7 1.2E-15 2.7E-20 151.4 25.8 241 64-342 5-252 (391)
188 KOG1009 Chromatin assembly com 99.7 2E-16 4.4E-21 158.5 20.1 293 63-383 12-364 (434)
189 KOG1445 Tumor-specific antigen 99.7 1E-16 2.3E-21 167.6 17.4 243 90-344 599-850 (1012)
190 KOG0649 WD40 repeat protein [G 99.7 2.9E-15 6.3E-20 140.5 24.5 250 65-342 11-278 (325)
191 COG2319 FOG: WD40 repeat [Gene 99.7 1.9E-14 4.2E-19 156.1 34.7 285 5-339 153-443 (466)
192 KOG4227 WD40 repeat protein [G 99.7 4E-16 8.7E-21 154.9 18.5 256 60-340 52-324 (609)
193 KOG1538 Uncharacterized conser 99.7 5.8E-16 1.2E-20 163.0 20.6 268 65-384 13-286 (1081)
194 KOG0771 Prolactin regulatory e 99.7 1.3E-15 2.8E-20 154.0 22.1 202 127-342 148-358 (398)
195 KOG1240 Protein kinase contain 99.7 3.3E-15 7.1E-20 167.6 26.0 302 6-336 1047-1431(1431)
196 KOG1517 Guanine nucleotide bin 99.7 3.6E-15 7.9E-20 164.7 25.3 254 68-344 1068-1339(1387)
197 KOG1310 WD40 repeat protein [G 99.7 2.3E-15 5.1E-20 155.6 22.0 222 5-251 48-303 (758)
198 KOG1963 WD40 repeat protein [G 99.7 3E-14 6.4E-19 156.0 31.2 332 10-382 163-539 (792)
199 KOG1524 WD40 repeat-containing 99.7 2.3E-15 5E-20 155.2 21.4 274 5-337 12-285 (737)
200 KOG2111 Uncharacterized conser 99.7 3.7E-14 8E-19 138.4 27.2 241 66-344 7-262 (346)
201 KOG1354 Serine/threonine prote 99.7 1.5E-15 3.2E-20 149.2 17.5 280 4-297 22-361 (433)
202 PRK11028 6-phosphogluconolacto 99.7 2.4E-14 5.2E-19 152.4 28.7 268 86-381 4-293 (330)
203 KOG2110 Uncharacterized conser 99.7 9E-14 1.9E-18 138.3 30.3 238 8-296 6-249 (391)
204 KOG0644 Uncharacterized conser 99.7 1.9E-16 4.1E-21 170.7 12.0 272 60-384 186-461 (1113)
205 KOG1524 WD40 repeat-containing 99.7 3.5E-15 7.5E-20 153.9 19.0 205 136-384 75-279 (737)
206 PRK01742 tolB translocation pr 99.6 2.6E-14 5.6E-19 157.2 25.4 213 93-337 183-400 (429)
207 KOG3881 Uncharacterized conser 99.6 3.3E-14 7.2E-19 142.3 23.4 264 60-344 51-326 (412)
208 KOG1334 WD40 repeat protein [G 99.6 4.5E-15 9.8E-20 151.9 17.0 299 60-384 138-469 (559)
209 KOG2394 WD40 protein DMR-N9 [G 99.6 3.4E-14 7.4E-19 147.1 22.0 243 35-316 140-383 (636)
210 KOG2321 WD40 repeat protein [G 99.6 7.8E-14 1.7E-18 145.4 24.3 283 7-339 51-344 (703)
211 PRK01742 tolB translocation pr 99.6 4.9E-14 1.1E-18 155.0 23.2 236 38-319 183-427 (429)
212 KOG1240 Protein kinase contain 99.6 7.8E-14 1.7E-18 156.7 24.6 270 58-343 1042-1339(1431)
213 KOG1523 Actin-related protein 99.6 7.7E-14 1.7E-18 136.2 19.5 241 63-330 9-270 (361)
214 KOG4497 Uncharacterized conser 99.6 3.9E-13 8.5E-18 131.4 22.9 298 12-363 13-413 (447)
215 KOG3881 Uncharacterized conser 99.6 1.7E-13 3.7E-18 137.3 20.5 221 85-318 116-342 (412)
216 KOG1310 WD40 repeat protein [G 99.6 2E-14 4.3E-19 148.8 14.2 219 114-344 41-309 (758)
217 KOG2315 Predicted translation 99.6 1.2E-12 2.7E-17 136.8 27.1 242 68-344 129-396 (566)
218 PRK03629 tolB translocation pr 99.6 1.5E-12 3.3E-17 143.0 29.5 237 95-362 180-427 (429)
219 KOG2139 WD40 repeat protein [G 99.6 2.1E-12 4.6E-17 128.0 26.8 290 8-339 99-432 (445)
220 PRK05137 tolB translocation pr 99.6 1.2E-12 2.7E-17 144.4 28.0 237 95-362 183-432 (435)
221 KOG1272 WD40-repeat-containing 99.6 1.9E-14 4.1E-19 146.5 12.1 270 10-335 132-406 (545)
222 KOG0771 Prolactin regulatory e 99.6 6.1E-14 1.3E-18 142.0 15.4 198 68-295 148-354 (398)
223 KOG0280 Uncharacterized conser 99.5 1.2E-12 2.5E-17 126.7 21.8 299 19-340 24-335 (339)
224 PRK04922 tolB translocation pr 99.5 2.5E-12 5.5E-17 141.8 27.4 222 94-342 184-415 (433)
225 PRK02889 tolB translocation pr 99.5 2.3E-12 5.1E-17 141.6 26.2 218 95-339 177-404 (427)
226 KOG1272 WD40-repeat-containing 99.5 2.4E-14 5.2E-19 145.8 9.4 231 65-336 130-360 (545)
227 PF02239 Cytochrom_D1: Cytochr 99.5 2.7E-12 5.8E-17 137.0 24.3 286 12-344 41-353 (369)
228 PRK03629 tolB translocation pr 99.5 3.3E-12 7.2E-17 140.3 25.3 239 39-318 179-428 (429)
229 KOG2111 Uncharacterized conser 99.5 1.6E-11 3.6E-16 120.2 26.8 242 6-297 4-258 (346)
230 KOG2139 WD40 repeat protein [G 99.5 3.6E-12 7.9E-17 126.4 22.3 202 123-339 98-312 (445)
231 KOG4497 Uncharacterized conser 99.5 9.5E-12 2.1E-16 121.9 23.9 277 7-331 48-425 (447)
232 KOG2394 WD40 protein DMR-N9 [G 99.5 1.3E-12 2.7E-17 135.6 18.5 190 135-349 184-373 (636)
233 PRK04922 tolB translocation pr 99.5 5.7E-12 1.2E-16 139.0 25.3 238 39-317 184-432 (433)
234 KOG2321 WD40 repeat protein [G 99.5 9.9E-12 2.1E-16 130.0 24.5 281 54-384 41-336 (703)
235 PF08662 eIF2A: Eukaryotic tra 99.5 4.8E-12 1E-16 122.9 19.6 157 176-343 8-184 (194)
236 PRK02889 tolB translocation pr 99.4 1.6E-11 3.4E-16 135.1 24.5 208 146-383 176-392 (427)
237 PRK05137 tolB translocation pr 99.4 3.9E-11 8.4E-16 132.5 27.7 238 39-318 182-433 (435)
238 KOG0974 WD-repeat protein WDR6 99.4 5.4E-12 1.2E-16 140.8 20.3 206 124-344 88-294 (967)
239 KOG0322 G-protein beta subunit 99.4 1.8E-12 3.9E-17 123.5 13.5 249 62-344 12-287 (323)
240 PF10282 Lactonase: Lactonase, 99.4 1.7E-10 3.7E-15 123.2 30.4 288 37-344 11-330 (345)
241 KOG1354 Serine/threonine prote 99.4 5E-12 1.1E-16 124.6 16.4 262 63-344 24-365 (433)
242 KOG0309 Conserved WD40 repeat- 99.4 2E-12 4.4E-17 138.2 13.5 300 4-340 21-341 (1081)
243 PF08662 eIF2A: Eukaryotic tra 99.4 2.9E-11 6.2E-16 117.4 20.4 162 127-304 9-187 (194)
244 PRK04792 tolB translocation pr 99.4 1.5E-10 3.2E-15 127.8 27.8 209 117-342 211-429 (448)
245 KOG0280 Uncharacterized conser 99.4 1.5E-11 3.1E-16 119.2 17.0 233 38-297 94-335 (339)
246 TIGR02800 propeller_TolB tol-p 99.4 1.3E-10 2.9E-15 128.0 26.1 220 95-341 171-400 (417)
247 PF02239 Cytochrom_D1: Cytochr 99.4 6.6E-11 1.4E-15 126.4 22.6 277 37-344 14-308 (369)
248 KOG2315 Predicted translation 99.4 2.5E-10 5.4E-15 119.8 25.3 305 10-379 37-372 (566)
249 PRK00178 tolB translocation pr 99.3 4.6E-10 9.9E-15 124.1 28.1 221 95-342 180-410 (430)
250 PRK01029 tolB translocation pr 99.3 7E-10 1.5E-14 121.5 29.1 231 117-362 178-424 (428)
251 KOG2041 WD40 repeat protein [G 99.3 2.3E-10 4.9E-15 122.3 22.4 290 5-339 12-338 (1189)
252 KOG4547 WD40 repeat-containing 99.3 1.9E-10 4E-15 121.7 20.2 196 135-342 4-224 (541)
253 PRK04792 tolB translocation pr 99.3 7.4E-10 1.6E-14 122.3 26.1 222 62-318 215-447 (448)
254 COG2706 3-carboxymuconate cycl 99.3 1.2E-08 2.5E-13 102.7 31.3 282 37-340 14-323 (346)
255 COG5170 CDC55 Serine/threonine 99.3 2.3E-11 4.9E-16 118.3 11.7 306 4-339 23-368 (460)
256 COG5354 Uncharacterized protei 99.3 1.9E-09 4.2E-14 111.9 25.5 309 9-382 34-380 (561)
257 PF10282 Lactonase: Lactonase, 99.3 7E-09 1.5E-13 110.8 31.2 280 7-315 36-345 (345)
258 TIGR02800 propeller_TolB tol-p 99.3 9.2E-10 2E-14 121.3 25.2 208 146-383 170-386 (417)
259 KOG1409 Uncharacterized conser 99.3 3.5E-10 7.6E-15 111.9 18.9 203 63-296 67-271 (404)
260 KOG1064 RAVE (regulator of V-A 99.2 7.6E-11 1.7E-15 137.2 14.8 201 119-344 2204-2404(2439)
261 COG2706 3-carboxymuconate cycl 99.2 5E-08 1.1E-12 98.2 32.9 281 4-316 36-345 (346)
262 PRK00178 tolB translocation pr 99.2 2.3E-09 4.9E-14 118.5 25.6 209 147-383 180-395 (430)
263 KOG1409 Uncharacterized conser 99.2 6.9E-10 1.5E-14 109.9 18.0 255 59-344 19-276 (404)
264 COG5354 Uncharacterized protei 99.2 8E-09 1.7E-13 107.4 26.5 298 7-344 71-401 (561)
265 KOG2314 Translation initiation 99.2 2.5E-09 5.3E-14 111.9 22.8 317 8-365 250-595 (698)
266 KOG0974 WD-repeat protein WDR6 99.2 6.4E-10 1.4E-14 124.5 19.7 144 85-252 146-289 (967)
267 PRK01029 tolB translocation pr 99.2 1.2E-08 2.7E-13 111.8 28.7 229 63-319 183-426 (428)
268 PF04762 IKI3: IKI3 family; I 99.2 4.2E-08 9.1E-13 116.1 34.1 303 8-340 121-521 (928)
269 KOG2314 Translation initiation 99.2 2.2E-08 4.9E-13 104.9 27.8 307 11-381 214-557 (698)
270 TIGR02658 TTQ_MADH_Hv methylam 99.1 3.3E-08 7.2E-13 103.4 27.7 265 39-345 27-337 (352)
271 KOG4547 WD40 repeat-containing 99.1 4.6E-09 1E-13 111.3 21.3 188 85-295 6-220 (541)
272 KOG1912 WD40 repeat protein [G 99.1 7E-09 1.5E-13 112.4 22.9 296 10-344 18-370 (1062)
273 PLN02919 haloacid dehalogenase 99.1 2.1E-08 4.6E-13 120.8 29.0 250 69-342 572-892 (1057)
274 KOG2041 WD40 repeat protein [G 99.1 3.3E-09 7.1E-14 113.6 18.9 245 62-329 12-279 (1189)
275 COG4946 Uncharacterized protei 99.1 1.8E-07 3.9E-12 96.4 30.6 223 135-381 277-508 (668)
276 KOG1064 RAVE (regulator of V-A 99.1 3.9E-10 8.4E-15 131.5 11.8 200 2-260 2203-2406(2439)
277 KOG0309 Conserved WD40 repeat- 99.1 4.6E-10 9.9E-15 120.6 10.2 252 9-296 69-340 (1081)
278 KOG4714 Nucleoporin [Nuclear s 99.1 2.9E-09 6.4E-14 101.7 13.9 209 67-296 39-255 (319)
279 TIGR03300 assembly_YfgL outer 99.1 1.3E-07 2.9E-12 102.5 29.0 259 85-378 106-376 (377)
280 KOG4532 WD40-like repeat conta 99.0 5.7E-08 1.2E-12 93.4 21.3 234 85-343 85-336 (344)
281 KOG3914 WD repeat protein WDR4 99.0 6E-09 1.3E-13 105.7 15.5 165 10-213 65-232 (390)
282 PRK04043 tolB translocation pr 99.0 2E-07 4.4E-12 101.6 28.3 200 125-343 189-405 (419)
283 PF04762 IKI3: IKI3 family; I 99.0 1.2E-06 2.7E-11 103.7 35.4 254 63-338 74-379 (928)
284 PLN02919 haloacid dehalogenase 99.0 3E-07 6.5E-12 110.9 30.1 208 66-299 625-892 (1057)
285 PF15492 Nbas_N: Neuroblastoma 99.0 3E-07 6.5E-12 90.1 24.1 249 12-305 2-269 (282)
286 COG4946 Uncharacterized protei 99.0 2.3E-07 5E-12 95.7 23.9 148 61-237 356-508 (668)
287 KOG1645 RING-finger-containing 98.9 1.6E-07 3.5E-12 95.2 22.1 302 6-339 134-462 (463)
288 KOG4190 Uncharacterized conser 98.9 6.2E-09 1.4E-13 108.4 12.0 255 55-337 726-987 (1034)
289 KOG1912 WD40 repeat protein [G 98.9 1.6E-07 3.5E-12 102.1 22.4 245 64-339 15-305 (1062)
290 PRK04043 tolB translocation pr 98.9 5.3E-07 1.1E-11 98.3 26.8 186 175-382 189-388 (419)
291 PF08450 SGL: SMP-30/Gluconola 98.9 8.8E-07 1.9E-11 90.0 26.8 225 69-326 4-244 (246)
292 TIGR03300 assembly_YfgL outer 98.9 5.1E-07 1.1E-11 98.0 26.3 220 85-335 146-376 (377)
293 TIGR02658 TTQ_MADH_Hv methylam 98.9 7E-07 1.5E-11 93.5 25.7 261 14-304 52-339 (352)
294 PF15492 Nbas_N: Neuroblastoma 98.8 5E-06 1.1E-10 81.7 26.6 233 87-344 11-265 (282)
295 KOG4190 Uncharacterized conser 98.8 7.7E-09 1.7E-13 107.8 7.2 217 115-342 727-952 (1034)
296 KOG4532 WD40-like repeat conta 98.8 6.1E-07 1.3E-11 86.5 19.4 197 136-344 84-288 (344)
297 KOG3914 WD repeat protein WDR4 98.8 8.2E-08 1.8E-12 97.6 13.5 159 177-344 66-229 (390)
298 KOG2695 WD40 repeat protein [G 98.7 2.9E-08 6.3E-13 98.6 8.7 170 130-316 218-401 (425)
299 KOG1832 HIV-1 Vpr-binding prot 98.7 1.5E-08 3.2E-13 111.1 5.7 223 114-379 1092-1319(1516)
300 KOG0882 Cyclophilin-related pe 98.7 2.5E-07 5.4E-12 95.0 13.6 253 61-344 6-311 (558)
301 KOG1920 IkappaB kinase complex 98.7 8.3E-06 1.8E-10 93.7 27.0 248 64-337 68-364 (1265)
302 KOG4714 Nucleoporin [Nuclear s 98.7 2.4E-07 5.3E-12 88.8 12.0 148 85-252 102-255 (319)
303 KOG2695 WD40 repeat protein [G 98.6 1.5E-07 3.2E-12 93.7 10.3 177 3-213 207-385 (425)
304 KOG1832 HIV-1 Vpr-binding prot 98.6 4.3E-08 9.3E-13 107.6 6.9 275 7-342 1101-1402(1516)
305 PRK11138 outer membrane biogen 98.6 1.9E-05 4.1E-10 86.2 27.0 224 85-337 161-393 (394)
306 PRK11138 outer membrane biogen 98.6 3.1E-05 6.7E-10 84.5 28.5 230 85-344 121-359 (394)
307 COG5170 CDC55 Serine/threonine 98.6 2.2E-07 4.7E-12 91.0 10.0 168 120-295 169-367 (460)
308 KOG1008 Uncharacterized conser 98.6 4E-08 8.7E-13 104.9 4.7 211 62-295 54-275 (783)
309 KOG2114 Vacuolar assembly/sort 98.6 1.4E-05 3E-10 88.8 23.5 206 85-308 36-257 (933)
310 KOG0882 Cyclophilin-related pe 98.5 5.2E-07 1.1E-11 92.7 11.2 218 122-351 8-244 (558)
311 PF00930 DPPIV_N: Dipeptidyl p 98.5 3.1E-05 6.8E-10 83.0 25.4 290 16-329 1-349 (353)
312 PF13360 PQQ_2: PQQ-like domai 98.5 8.4E-05 1.8E-09 74.8 25.5 216 93-343 2-235 (238)
313 KOG3621 WD40 repeat-containing 98.5 2E-05 4.3E-10 85.9 21.2 292 5-341 31-356 (726)
314 KOG3617 WD40 and TPR repeat-co 98.4 1.3E-05 2.8E-10 88.3 19.0 115 11-156 19-133 (1416)
315 COG0823 TolB Periplasmic compo 98.4 4.1E-05 8.9E-10 83.1 23.1 199 114-328 183-390 (425)
316 KOG2066 Vacuolar assembly/sort 98.4 1.1E-05 2.4E-10 89.0 18.2 187 7-252 39-234 (846)
317 KOG2066 Vacuolar assembly/sort 98.4 1E-05 2.2E-10 89.2 16.8 186 123-340 39-235 (846)
318 PF08450 SGL: SMP-30/Gluconola 98.4 0.00019 4E-09 72.9 24.8 218 12-282 4-242 (246)
319 KOG1275 PAB-dependent poly(A) 98.4 7.6E-06 1.6E-10 91.1 15.2 181 85-293 148-340 (1118)
320 PF07433 DUF1513: Protein of u 98.3 0.00037 8E-09 70.8 25.5 238 8-289 5-279 (305)
321 KOG1275 PAB-dependent poly(A) 98.3 7.9E-06 1.7E-10 91.0 13.9 185 135-336 146-340 (1118)
322 PF07433 DUF1513: Protein of u 98.3 0.00019 4.1E-09 72.9 22.3 208 126-344 7-253 (305)
323 PF13360 PQQ_2: PQQ-like domai 98.3 0.00016 3.4E-09 72.8 22.3 190 85-302 37-237 (238)
324 PF00400 WD40: WD domain, G-be 98.3 2.5E-06 5.3E-11 59.1 6.0 39 297-336 1-39 (39)
325 KOG3621 WD40 repeat-containing 98.2 9.9E-05 2.1E-09 80.7 20.0 148 85-251 46-197 (726)
326 KOG2114 Vacuolar assembly/sort 98.2 0.00035 7.5E-09 78.1 24.5 215 13-266 29-258 (933)
327 PF14583 Pectate_lyase22: Olig 98.2 0.00071 1.5E-08 70.9 25.0 286 11-338 39-381 (386)
328 KOG1920 IkappaB kinase complex 98.2 0.00018 4E-09 83.0 22.1 238 123-377 68-361 (1265)
329 PF08596 Lgl_C: Lethal giant l 98.2 8.1E-05 1.7E-09 80.1 18.0 290 9-339 3-336 (395)
330 PF00400 WD40: WD domain, G-be 98.2 4.6E-06 9.9E-11 57.7 5.4 38 255-293 2-39 (39)
331 cd00216 PQQ_DH Dehydrogenases 98.1 0.0025 5.5E-08 71.4 30.1 265 85-385 111-461 (488)
332 KOG1924 RhoA GTPase effector D 98.1 1.3E-05 2.9E-10 87.6 11.2 9 661-669 730-738 (1102)
333 KOG1645 RING-finger-containing 98.1 5.9E-05 1.3E-09 77.1 15.0 215 116-344 186-425 (463)
334 KOG1008 Uncharacterized conser 98.1 9.2E-07 2E-11 94.8 2.4 207 123-341 56-278 (783)
335 PF14583 Pectate_lyase22: Olig 98.1 0.00018 3.8E-09 75.3 19.0 281 63-383 34-372 (386)
336 PF00930 DPPIV_N: Dipeptidyl p 98.1 0.00073 1.6E-08 72.5 24.6 260 93-381 22-347 (353)
337 PF06977 SdiA-regulated: SdiA- 98.1 0.00022 4.7E-09 71.4 18.9 197 174-380 22-240 (248)
338 PRK02888 nitrous-oxide reducta 98.1 0.00035 7.7E-09 77.3 21.1 243 135-388 140-402 (635)
339 COG0823 TolB Periplasmic compo 98.1 0.00021 4.6E-09 77.7 18.7 190 175-383 194-391 (425)
340 PF04841 Vps16_N: Vps16, N-ter 98.0 0.0059 1.3E-07 66.6 29.2 213 95-336 62-285 (410)
341 PF06977 SdiA-regulated: SdiA- 98.0 0.0011 2.3E-08 66.5 21.3 203 118-335 16-247 (248)
342 PF11768 DUF3312: Protein of u 98.0 0.0002 4.4E-09 77.3 16.8 140 40-208 185-333 (545)
343 COG3386 Gluconolactonase [Carb 98.0 0.0032 7E-08 65.3 25.3 230 69-329 29-277 (307)
344 PF11768 DUF3312: Protein of u 98.0 0.0031 6.8E-08 68.4 25.7 77 262-342 257-333 (545)
345 PRK02888 nitrous-oxide reducta 98.0 0.0008 1.7E-08 74.6 21.7 104 183-296 286-405 (635)
346 PF08596 Lgl_C: Lethal giant l 98.0 0.00027 5.8E-09 76.1 17.9 277 66-383 3-328 (395)
347 PF02840 Prp18: Prp18 domain; 98.0 2.7E-05 5.8E-10 69.6 8.0 101 615-715 2-140 (144)
348 KOG4649 PQQ (pyrrolo-quinoline 97.9 0.011 2.5E-07 57.5 25.4 61 85-155 106-166 (354)
349 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.9 0.017 3.7E-07 65.1 31.4 268 85-382 121-524 (527)
350 PF02897 Peptidase_S9_N: Proly 97.9 0.011 2.4E-07 65.0 28.6 251 67-344 126-410 (414)
351 cd00216 PQQ_DH Dehydrogenases 97.9 0.0036 7.7E-08 70.2 24.8 284 85-391 62-434 (488)
352 PF04053 Coatomer_WDAD: Coatom 97.9 0.0044 9.5E-08 67.7 24.3 223 63-342 31-266 (443)
353 KOG1897 Damage-specific DNA bi 97.9 0.024 5.2E-07 64.9 30.2 264 58-344 524-822 (1096)
354 PF14655 RAB3GAP2_N: Rab3 GTPa 97.8 0.0011 2.4E-08 71.1 18.2 85 259-344 302-404 (415)
355 PF06433 Me-amine-dh_H: Methyl 97.8 0.0029 6.3E-08 65.2 20.2 271 10-306 38-331 (342)
356 PF08553 VID27: VID27 cytoplas 97.7 0.0059 1.3E-07 70.4 22.7 147 85-250 494-646 (794)
357 COG3391 Uncharacterized conser 97.7 0.032 7E-07 60.4 27.5 204 126-344 76-289 (381)
358 KOG1924 RhoA GTPase effector D 97.7 0.0003 6.5E-09 77.4 11.3 7 620-626 657-663 (1102)
359 PF06433 Me-amine-dh_H: Methyl 97.7 0.0029 6.3E-08 65.2 17.7 247 69-347 40-329 (342)
360 COG3391 Uncharacterized conser 97.6 0.034 7.3E-07 60.2 26.6 191 175-382 75-273 (381)
361 KOG4649 PQQ (pyrrolo-quinoline 97.6 0.012 2.6E-07 57.3 19.9 150 180-340 17-167 (354)
362 PF02897 Peptidase_S9_N: Proly 97.6 0.018 4E-07 63.3 24.5 254 10-300 126-409 (414)
363 PF00780 CNH: CNH domain; Int 97.5 0.067 1.5E-06 55.1 26.1 226 85-344 8-261 (275)
364 PF04841 Vps16_N: Vps16, N-ter 97.5 0.094 2E-06 57.3 28.2 254 40-344 62-320 (410)
365 PF08553 VID27: VID27 cytoplas 97.5 0.005 1.1E-07 70.9 18.6 146 186-338 493-647 (794)
366 PF00780 CNH: CNH domain; Int 97.5 0.053 1.1E-06 55.8 25.1 243 17-307 5-267 (275)
367 PF04053 Coatomer_WDAD: Coatom 97.5 0.0072 1.6E-07 66.1 18.7 181 119-334 28-219 (443)
368 KOG2395 Protein involved in va 97.4 0.0045 9.6E-08 66.0 15.4 142 188-338 348-500 (644)
369 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.4 0.1 2.2E-06 59.0 27.6 195 85-300 70-338 (527)
370 PF14783 BBS2_Mid: Ciliary BBS 97.4 0.0058 1.3E-07 52.2 12.9 92 85-200 16-110 (111)
371 COG3490 Uncharacterized protei 97.4 0.18 3.8E-06 50.2 24.6 243 65-337 68-347 (366)
372 KOG1897 Damage-specific DNA bi 97.3 0.38 8.3E-06 55.6 30.4 284 15-336 265-564 (1096)
373 PRK10115 protease 2; Provision 97.3 0.29 6.3E-06 57.2 31.1 250 10-298 129-397 (686)
374 KOG3617 WD40 and TPR repeat-co 97.3 0.0072 1.6E-07 67.5 16.0 108 69-204 20-131 (1416)
375 PF05096 Glu_cyclase_2: Glutam 97.3 0.043 9.3E-07 54.8 19.7 182 125-326 46-249 (264)
376 PF03178 CPSF_A: CPSF A subuni 97.3 0.021 4.6E-07 60.4 19.1 186 136-335 42-262 (321)
377 COG5276 Uncharacterized conser 97.2 0.26 5.7E-06 49.3 25.2 283 5-338 84-369 (370)
378 KOG4441 Proteins containing BT 97.2 0.015 3.3E-07 66.0 18.7 232 85-342 286-550 (571)
379 COG3386 Gluconolactonase [Carb 97.2 0.097 2.1E-06 54.4 22.9 244 129-401 30-297 (307)
380 KOG4499 Ca2+-binding protein R 97.2 0.074 1.6E-06 51.3 19.5 220 85-325 28-271 (310)
381 PF14727 PHTB1_N: PTHB1 N-term 97.2 0.3 6.4E-06 52.9 26.8 285 20-341 38-363 (418)
382 KOG4640 Anaphase-promoting com 97.1 0.0016 3.5E-08 70.7 8.9 77 265-344 21-98 (665)
383 PF03178 CPSF_A: CPSF A subuni 97.1 0.013 2.8E-07 62.0 15.7 191 19-240 42-257 (321)
384 PF05694 SBP56: 56kDa selenium 97.1 0.23 4.9E-06 53.0 23.9 228 85-327 89-393 (461)
385 COG3204 Uncharacterized protei 97.0 0.1 2.2E-06 52.3 19.6 172 119-303 81-270 (316)
386 KOG2444 WD40 repeat protein [G 97.0 0.0013 2.8E-08 63.1 6.0 147 188-342 32-181 (238)
387 PF15390 DUF4613: Domain of un 97.0 0.19 4.2E-06 54.9 22.8 129 63-206 55-188 (671)
388 PHA03247 large tegument protei 97.0 0.16 3.5E-06 64.1 24.6 10 244-253 2332-2341(3151)
389 PF14783 BBS2_Mid: Ciliary BBS 97.0 0.029 6.2E-07 48.1 13.3 100 223-334 8-110 (111)
390 KOG2395 Protein involved in va 96.9 0.036 7.7E-07 59.4 16.4 147 86-251 348-500 (644)
391 KOG4441 Proteins containing BT 96.9 0.099 2.1E-06 59.5 21.5 242 17-298 283-549 (571)
392 smart00320 WD40 WD40 repeats. 96.9 0.0027 5.9E-08 42.1 5.6 39 297-336 2-40 (40)
393 COG3204 Uncharacterized protei 96.8 0.2 4.4E-06 50.2 19.6 196 172-380 84-302 (316)
394 KOG4640 Anaphase-promoting com 96.8 0.0046 9.9E-08 67.3 8.9 97 62-183 18-115 (665)
395 COG3490 Uncharacterized protei 96.7 0.22 4.7E-06 49.6 18.7 211 126-344 70-316 (366)
396 smart00320 WD40 WD40 repeats. 96.7 0.0039 8.5E-08 41.3 4.9 37 256-293 4-40 (40)
397 PHA02713 hypothetical protein; 96.7 0.13 2.8E-06 58.6 19.9 192 135-344 303-539 (557)
398 PHA02713 hypothetical protein; 96.7 0.093 2E-06 59.8 18.6 161 135-308 351-546 (557)
399 COG5276 Uncharacterized conser 96.6 0.88 1.9E-05 45.7 31.5 222 39-296 61-286 (370)
400 PF14870 PSII_BNR: Photosynthe 96.6 1.1 2.3E-05 46.6 25.6 151 173-335 144-301 (302)
401 PRK13616 lipoprotein LpqB; Pro 96.4 0.27 5.9E-06 56.0 20.0 183 8-227 350-550 (591)
402 PRK10115 protease 2; Provision 96.4 1.3 2.8E-05 51.9 25.9 197 125-338 128-344 (686)
403 PF05694 SBP56: 56kDa selenium 96.3 0.12 2.5E-06 55.1 15.4 243 135-380 86-392 (461)
404 PRK13616 lipoprotein LpqB; Pro 96.2 0.15 3.2E-06 58.2 16.7 151 175-337 351-524 (591)
405 KOG2444 WD40 repeat protein [G 96.1 0.0083 1.8E-07 57.6 5.2 143 138-295 32-177 (238)
406 TIGR03074 PQQ_membr_DH membran 96.1 0.7 1.5E-05 54.3 21.6 238 85-345 195-484 (764)
407 KOG2079 Vacuolar assembly/sort 96.1 0.021 4.5E-07 65.9 8.7 102 231-339 100-204 (1206)
408 KOG2079 Vacuolar assembly/sort 96.0 0.11 2.4E-06 60.3 14.1 103 85-203 100-202 (1206)
409 PF10168 Nup88: Nuclear pore c 96.0 1.7 3.8E-05 50.6 24.1 75 611-691 534-612 (717)
410 KOG2280 Vacuolar assembly/sort 95.9 0.42 9.1E-06 53.7 17.8 203 93-319 63-271 (829)
411 PF07995 GSDH: Glucose / Sorbo 95.9 1.1 2.4E-05 47.5 20.9 246 125-383 3-327 (331)
412 PF05096 Glu_cyclase_2: Glutam 95.9 0.82 1.8E-05 45.9 18.3 157 175-344 46-209 (264)
413 PRK13684 Ycf48-like protein; P 95.8 3.2 6.9E-05 44.1 30.6 152 173-337 172-330 (334)
414 PF10214 Rrn6: RNA polymerase 95.8 4.4 9.6E-05 48.2 27.3 117 174-296 146-277 (765)
415 KOG3671 Actin regulatory prote 95.8 0.31 6.6E-06 52.0 15.2 8 619-626 496-503 (569)
416 KOG4499 Ca2+-binding protein R 95.7 0.79 1.7E-05 44.5 16.4 112 124-237 158-273 (310)
417 PF15390 DUF4613: Domain of un 95.7 0.22 4.8E-06 54.5 13.9 158 64-251 19-186 (671)
418 PF07995 GSDH: Glucose / Sorbo 95.6 1.9 4E-05 45.8 21.1 76 256-333 245-330 (331)
419 KOG3671 Actin regulatory prote 95.6 1.7 3.7E-05 46.5 19.9 10 148-157 79-88 (569)
420 KOG2247 WD40 repeat-containing 95.6 0.0018 3.9E-08 68.3 -1.7 149 176-336 37-186 (615)
421 TIGR03548 mutarot_permut cycli 95.6 1.9 4.1E-05 45.5 21.1 186 187-389 74-320 (323)
422 KOG3630 Nuclear pore complex, 95.5 0.092 2E-06 61.2 11.1 147 10-185 103-255 (1405)
423 PF10647 Gmad1: Lipoprotein Lp 95.5 1.7 3.8E-05 44.0 19.5 158 175-340 25-199 (253)
424 PF10647 Gmad1: Lipoprotein Lp 95.5 1 2.2E-05 45.8 17.7 161 218-386 24-190 (253)
425 KOG4849 mRNA cleavage factor I 95.2 0.9 2E-05 46.1 15.5 24 666-689 418-441 (498)
426 TIGR03118 PEPCTERM_chp_1 conse 95.2 4.2 9.1E-05 41.4 22.2 218 125-351 24-292 (336)
427 KOG3630 Nuclear pore complex, 95.1 0.29 6.4E-06 57.2 13.1 144 175-325 102-260 (1405)
428 PHA03098 kelch-like protein; P 95.0 0.94 2E-05 51.6 17.6 193 135-343 294-516 (534)
429 PF12234 Rav1p_C: RAVE protein 95.0 0.48 1E-05 53.7 14.5 114 219-339 31-157 (631)
430 COG5167 VID27 Protein involved 94.9 1.3 2.7E-05 47.8 16.4 152 179-339 472-633 (776)
431 COG5290 IkappaB kinase complex 94.9 4.6 9.9E-05 46.0 21.3 115 220-338 249-366 (1243)
432 COG3823 Glutamine cyclotransfe 94.9 0.52 1.1E-05 44.9 12.2 181 128-327 50-248 (262)
433 PF14870 PSII_BNR: Photosynthe 94.8 5.9 0.00013 41.1 30.4 197 125-342 63-264 (302)
434 smart00036 CNH Domain found in 94.8 6.2 0.00013 41.2 28.8 253 16-305 10-280 (302)
435 PF12894 Apc4_WD40: Anaphase-p 94.7 0.07 1.5E-06 38.3 4.8 34 60-101 7-40 (47)
436 PF14761 HPS3_N: Hermansky-Pud 94.7 2 4.3E-05 41.6 15.8 142 188-338 30-214 (215)
437 TIGR02604 Piru_Ver_Nterm putat 94.6 7.8 0.00017 41.7 26.3 153 65-237 14-202 (367)
438 PHA03378 EBNA-3B; Provisional 94.2 2.1 4.7E-05 47.4 16.6 6 617-622 824-829 (991)
439 PF02333 Phytase: Phytase; In 94.2 3.2 7E-05 44.2 17.7 190 136-340 68-292 (381)
440 PF12894 Apc4_WD40: Anaphase-p 94.2 0.16 3.5E-06 36.4 5.6 33 307-340 11-43 (47)
441 PF10168 Nup88: Nuclear pore c 94.1 2.2 4.8E-05 49.8 17.8 82 9-103 86-180 (717)
442 TIGR03118 PEPCTERM_chp_1 conse 94.1 7.7 0.00017 39.6 24.3 235 67-317 25-307 (336)
443 TIGR02604 Piru_Ver_Nterm putat 94.0 3 6.6E-05 44.9 17.9 143 175-329 15-204 (367)
444 PHA03098 kelch-like protein; P 94.0 1.9 4.2E-05 49.0 17.3 151 135-298 342-514 (534)
445 PLN02153 epithiospecifier prot 94.0 9.7 0.00021 40.5 22.7 232 135-384 32-326 (341)
446 TIGR03547 muta_rot_YjhT mutatr 94.0 8 0.00017 41.2 21.0 23 135-157 63-96 (346)
447 PF10395 Utp8: Utp8 family; I 94.0 12 0.00026 42.7 22.4 168 173-347 129-314 (670)
448 PF08728 CRT10: CRT10; InterP 93.9 1.2 2.6E-05 51.0 14.7 128 65-204 101-246 (717)
449 COG5167 VID27 Protein involved 93.7 2.4 5.2E-05 45.7 15.3 142 88-251 484-632 (776)
450 PRK14131 N-acetylneuraminic ac 93.7 6.6 0.00014 42.4 19.7 12 197-208 190-201 (376)
451 KOG1900 Nuclear pore complex, 93.6 1.4 3.1E-05 52.8 14.9 163 32-205 92-273 (1311)
452 KOG2280 Vacuolar assembly/sort 93.6 9.5 0.0002 43.5 20.3 219 145-384 63-290 (829)
453 KOG1898 Splicing factor 3b, su 93.6 14 0.0003 43.8 22.1 81 8-101 583-670 (1205)
454 PF03022 MRJP: Major royal jel 93.6 2.3 5E-05 44.0 15.2 172 147-326 35-253 (287)
455 PHA02790 Kelch-like protein; P 93.4 2.6 5.5E-05 47.3 16.5 189 135-342 271-474 (480)
456 KOG2247 WD40 repeat-containing 93.4 0.03 6.6E-07 59.4 0.9 239 69-344 39-286 (615)
457 PF14727 PHTB1_N: PTHB1 N-term 93.3 15 0.00031 40.1 27.8 152 85-250 38-203 (418)
458 KOG1916 Nuclear protein, conta 93.3 0.21 4.6E-06 56.9 7.2 100 39-154 153-265 (1283)
459 PF12234 Rav1p_C: RAVE protein 93.2 0.8 1.7E-05 51.9 11.7 122 20-154 32-156 (631)
460 PF10433 MMS1_N: Mono-function 92.9 18 0.00039 40.8 22.5 257 16-317 219-503 (504)
461 TIGR03547 muta_rot_YjhT mutatr 92.6 16 0.00035 38.8 22.0 21 366-386 315-335 (346)
462 PF08728 CRT10: CRT10; InterP 92.6 6.2 0.00014 45.4 17.6 114 175-294 102-245 (717)
463 COG1520 FOG: WD40-like repeat 92.5 8.6 0.00019 41.4 18.5 194 188-391 70-278 (370)
464 PRK14131 N-acetylneuraminic ac 92.3 14 0.00031 39.8 20.0 18 367-384 338-355 (376)
465 PF14781 BBS2_N: Ciliary BBSom 92.3 6 0.00013 35.3 13.4 115 180-303 5-133 (136)
466 TIGR03074 PQQ_membr_DH membran 92.3 20 0.00042 42.5 21.9 112 188-304 196-353 (764)
467 PHA03378 EBNA-3B; Provisional 92.2 3.8 8.2E-05 45.6 14.6 11 674-684 957-967 (991)
468 PF02333 Phytase: Phytase; In 92.1 14 0.00031 39.4 18.7 201 85-303 69-299 (381)
469 KOG2377 Uncharacterized conser 91.9 2.9 6.2E-05 44.6 12.9 157 127-297 26-187 (657)
470 KOG1916 Nuclear protein, conta 91.8 0.082 1.8E-06 60.0 1.8 124 62-204 130-255 (1283)
471 KOG1984 Vesicle coat complex C 91.8 19 0.00041 41.9 19.8 13 680-692 302-314 (1007)
472 KOG1898 Splicing factor 3b, su 91.7 12 0.00025 44.4 18.3 190 147-351 854-1061(1205)
473 COG4590 ABC-type uncharacteriz 91.7 2.5 5.4E-05 44.9 12.1 161 173-343 220-391 (733)
474 PF10214 Rrn6: RNA polymerase 91.5 37 0.0008 40.5 26.5 183 62-252 77-277 (765)
475 PF10313 DUF2415: Uncharacteri 91.4 0.75 1.6E-05 32.1 5.5 32 265-296 1-34 (43)
476 TIGR03548 mutarot_permut cycli 91.3 14 0.0003 38.9 18.1 23 135-157 171-197 (323)
477 PF10313 DUF2415: Uncharacteri 91.1 0.63 1.4E-05 32.4 4.8 32 124-155 1-34 (43)
478 KOG2377 Uncharacterized conser 90.8 3.9 8.4E-05 43.6 12.5 134 91-237 40-173 (657)
479 PF13449 Phytase-like: Esteras 90.8 24 0.00053 37.2 21.1 200 124-330 20-310 (326)
480 COG1506 DAP2 Dipeptidyl aminop 90.7 38 0.00083 39.3 25.9 288 5-338 57-384 (620)
481 KOG4849 mRNA cleavage factor I 90.7 22 0.00048 36.5 18.6 35 677-711 385-426 (498)
482 COG3823 Glutamine cyclotransfe 90.5 6.3 0.00014 37.8 12.4 135 86-238 103-249 (262)
483 PF14655 RAB3GAP2_N: Rab3 GTPa 89.8 2.1 4.6E-05 46.3 10.1 92 118-213 302-407 (415)
484 KOG4659 Uncharacterized conser 89.5 57 0.0012 39.9 21.5 25 359-383 659-683 (1899)
485 PHA02790 Kelch-like protein; P 89.5 12 0.00025 42.0 16.3 172 187-382 273-456 (480)
486 PF07569 Hira: TUP1-like enhan 89.3 1.9 4E-05 42.7 8.7 71 135-207 21-98 (219)
487 smart00036 CNH Domain found in 89.1 31 0.00068 35.9 21.3 59 137-204 14-73 (302)
488 KOG1900 Nuclear pore complex, 88.8 5.2 0.00011 48.3 12.9 155 177-341 82-275 (1311)
489 COG1770 PtrB Protease II [Amin 88.5 50 0.0011 37.6 22.5 206 126-344 131-354 (682)
490 COG1520 FOG: WD40-like repeat 88.4 40 0.00086 36.3 20.0 194 136-344 68-274 (370)
491 PF07569 Hira: TUP1-like enhan 88.4 2.7 5.8E-05 41.5 9.0 67 276-344 21-101 (219)
492 PF10433 MMS1_N: Mono-function 87.9 29 0.00064 39.1 18.4 235 8-274 256-503 (504)
493 PF05935 Arylsulfotrans: Aryls 87.7 33 0.00071 38.4 18.2 179 194-384 126-370 (477)
494 KOG0260 RNA polymerase II, lar 87.4 33 0.00071 41.3 17.7 11 331-341 1273-1283(1605)
495 PLN02153 epithiospecifier prot 87.3 39 0.00084 35.8 18.0 12 146-157 217-228 (341)
496 PF11635 Med16: Mediator compl 87.2 34 0.00075 40.6 18.8 194 138-333 64-345 (753)
497 KOG4460 Nuclear pore complex, 87.1 5.2 0.00011 43.5 10.6 106 234-343 55-203 (741)
498 KOG1923 Rac1 GTPase effector F 86.8 13 0.00029 42.4 13.9 11 699-709 510-520 (830)
499 KOG1983 Tomosyn and related SN 86.8 19 0.0004 44.0 16.5 246 48-342 19-268 (993)
500 TIGR03606 non_repeat_PQQ dehyd 86.6 56 0.0012 36.1 18.8 165 116-282 22-246 (454)
No 1
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.7e-74 Score=632.34 Aligned_cols=369 Identities=52% Similarity=0.938 Sum_probs=327.1
Q ss_pred ccccccCccceEEEcCCCC-eEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCC
Q 046451 2 ACIKGINRSASVAFAPDAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSE 80 (719)
Q Consensus 2 ~~l~~~~~V~~vafSpdg~-~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~ 80 (719)
|++|++++...++|||++. +||+|+..|.++..|+.+.+++||.+++......++.+.......++++|+|++.+.+.
T Consensus 1 mklK~~~Rta~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~- 79 (1049)
T KOG0307|consen 1 MKLKELSRTATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHS- 79 (1049)
T ss_pred CccccccccceEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccccccccceeeeecccCCCc-
Confidence 6899999999999999997 99999999999999999999999999998888878888899999999999999988533
Q ss_pred CCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCC
Q 046451 81 DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 81 ~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~ 160 (719)
.++|+.|.+||.|.+||........+. ..+.++..|++.|..|.|+++.+++||+|+.||.|.|||+++.+...
T Consensus 80 ---~GlIaGG~edG~I~ly~p~~~~~~~~~---~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~ 153 (1049)
T KOG0307|consen 80 ---HGLIAGGLEDGNIVLYDPASIIANASE---EVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPF 153 (1049)
T ss_pred ---cceeeccccCCceEEecchhhccCcch---HHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCC
Confidence 268999999999999999765433344 77888999999999999999888899999999999999999877664
Q ss_pred ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCC-CceeEEEECCCCCcEEEEEeCC
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIK-RRCSVLQWNPDVATQLVVASDE 239 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~-~~i~~l~~sp~g~~~l~~~s~d 239 (719)
.+. .....+.|.+++|+...+++|++++.+|++.|||++..+.+..+..... ..+..|+|+|++.+.++++++|
T Consensus 154 ~~~-----~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~d 228 (1049)
T KOG0307|consen 154 TPG-----SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGD 228 (1049)
T ss_pred CCC-----CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCC
Confidence 431 2234669999999999999999999999999999999998888875333 4588999999999999999999
Q ss_pred CCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCC
Q 046451 240 DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKI 319 (719)
Q Consensus 240 ~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg 319 (719)
++...|.+||+|....+++++++|..+|.++.|++.|.++|++++.|++|.+|+.++++.+.++....+|++.+.|+|..
T Consensus 229 d~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~ 308 (1049)
T KOG0307|consen 229 DSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRN 308 (1049)
T ss_pred CCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCC
Confidence 99999999999999899999999999999999999888999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCcccccCCCC-------CCCCCccCcceecCCC-ceeeeeCCcEEEEccCC
Q 046451 320 PGVISASSFDGKIGIYNIEGCSRYGVGDSN-------FSAAPLRAPKWYKRPA-GASFGFGGKLVSFHPKS 382 (719)
Q Consensus 320 ~~~las~s~Dg~I~iwd~~~~~~~~~~~~~-------~~~~~~~~p~w~~~~~-~~s~s~~Gklv~~~~~~ 382 (719)
+.++++++.||+|.||.+.++......... ........|+|+++++ |++|+|+||++.|+...
T Consensus 309 P~~~A~asfdgkI~I~sl~~~~~~~~~~~~k~~~a~~~~~~l~~~PkW~~~P~~Gasf~fggkLvtf~~~~ 379 (1049)
T KOG0307|consen 309 PSVMAAASFDGKISIYSLQGTDTDLVQQAQKIAQAAQPSIPLKKPPKWIRRPLDGASFAFGGKLVTFEPES 379 (1049)
T ss_pred cchhhhheeccceeeeeeecCCccchhhhhhhhhhccccccccCCcceeecccccceeecCceEEEEeccc
Confidence 999999999999999999998755532211 1112236889999998 99999999999999887
No 2
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.5e-45 Score=358.35 Aligned_cols=294 Identities=21% Similarity=0.363 Sum_probs=260.8
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.|.+.|.|++|||+|++||+|+.|.++ ++||+++.... ....+|...|.|++|+|||
T Consensus 113 GH~e~Vl~~~fsp~g~~l~tGsGD~Tv----------R~WD~~TeTp~-----~t~KgH~~WVlcvawsPDg-------- 169 (480)
T KOG0271|consen 113 GHGEAVLSVQFSPTGSRLVTGSGDTTV----------RLWDLDTETPL-----FTCKGHKNWVLCVAWSPDG-------- 169 (480)
T ss_pred CCCCcEEEEEecCCCceEEecCCCceE----------EeeccCCCCcc-----eeecCCccEEEEEEECCCc--------
Confidence 356789999999999999999766555 89999975543 3346799999999999999
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC----CCCEEEEEeCCCcEEEEcCCCCCCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF----TPNLLASGADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~----~~~~lasgs~dg~I~iwdl~~~~~~~ 160 (719)
..||+|+.||+|++||.+ ++ ......|.+|...|++|+|.|. ..++|++++.||.|+|||+..+.++.
T Consensus 170 k~iASG~~dg~I~lwdpk------tg--~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~ 241 (480)
T KOG0271|consen 170 KKIASGSKDGSIRLWDPK------TG--QQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVR 241 (480)
T ss_pred chhhccccCCeEEEecCC------CC--CcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEE
Confidence 799999999999999984 33 2666889999999999999763 35699999999999999999877664
Q ss_pred ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECC-----------CC
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNP-----------DV 229 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp-----------~g 229 (719)
. ..+|...|+|++|--+| ++++++.|++|++|+...|++..++. +|...|+.|+++- .+
T Consensus 242 ~-------lsgHT~~VTCvrwGG~g--liySgS~DrtIkvw~a~dG~~~r~lk-GHahwvN~lalsTdy~LRtgaf~~t~ 311 (480)
T KOG0271|consen 242 T-------LSGHTASVTCVRWGGEG--LIYSGSQDRTIKVWRALDGKLCRELK-GHAHWVNHLALSTDYVLRTGAFDHTG 311 (480)
T ss_pred E-------eccCccceEEEEEcCCc--eEEecCCCceEEEEEccchhHHHhhc-ccchheeeeeccchhhhhcccccccc
Confidence 4 35689999999998764 99999999999999999999999998 8999999998872 22
Q ss_pred C------------------------cEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeC
Q 046451 230 A------------------------TQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAK 285 (719)
Q Consensus 230 ~------------------------~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~ 285 (719)
. ..+++|++|. ++.+|+-....+++..+.+|...|+.+.||| |+++|++++.
T Consensus 312 ~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~---tlflW~p~~~kkpi~rmtgHq~lVn~V~fSP-d~r~IASaSF 387 (480)
T KOG0271|consen 312 RKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDF---TLFLWNPFKSKKPITRMTGHQALVNHVSFSP-DGRYIASASF 387 (480)
T ss_pred ccCCChHHHHHHHHHHHHHhhccCcceeEEecCCc---eEEEecccccccchhhhhchhhheeeEEECC-CccEEEEeec
Confidence 2 3599999998 9999999887789999999999999999999 9999999999
Q ss_pred CCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 286 DNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 286 Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
|..|++||-++|+.+.+|++|-..|+.++|+.|. ++|++|+.|.+++||++.+.++..
T Consensus 388 DkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDs-RLlVS~SkDsTLKvw~V~tkKl~~ 445 (480)
T KOG0271|consen 388 DKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADS-RLLVSGSKDSTLKVWDVRTKKLKQ 445 (480)
T ss_pred ccceeeeeCCCcchhhhhhhccceeEEEEeccCc-cEEEEcCCCceEEEEEeeeeeecc
Confidence 9999999999999999999999999999999998 899999999999999999998866
No 3
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=3.6e-42 Score=342.62 Aligned_cols=287 Identities=18% Similarity=0.331 Sum_probs=260.0
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
+.....|..+.||.|++.||||+.+|.+ +||+....... ....+|...|.++.|+|..++
T Consensus 172 ~gd~rPis~~~fS~ds~~laT~swsG~~----------kvW~~~~~~~~-----~~l~gH~~~v~~~~fhP~~~~----- 231 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDSKHLATGSWSGLV----------KVWSVPQCNLL-----QTLRGHTSRVGAAVFHPVDSD----- 231 (459)
T ss_pred ccCCCcceeeEeecCCCeEEEeecCCce----------eEeecCCccee-----EEEeccccceeeEEEccCCCc-----
Confidence 4455678999999999999999998877 88988755332 334789999999999998311
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
..||+|+.||++++|++ ... ..+..+.+|...|..++|+| +|++|++++.|.+-++||+++......
T Consensus 232 -~~lat~s~Dgtvklw~~------~~e---~~l~~l~gH~~RVs~VafHP-sG~~L~TasfD~tWRlWD~~tk~ElL~-- 298 (459)
T KOG0272|consen 232 -LNLATASADGTVKLWKL------SQE---TPLQDLEGHLARVSRVAFHP-SGKFLGTASFDSTWRLWDLETKSELLL-- 298 (459)
T ss_pred -cceeeeccCCceeeecc------CCC---cchhhhhcchhhheeeeecC-CCceeeecccccchhhcccccchhhHh--
Confidence 58999999999999999 344 77889999999999999999 899999999999999999999876532
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~ 243 (719)
..+|...|.+++|+++|. ++++|+.|..-+|||+++++++..+. +|...|.+++|+|+| +.+++|+.|+
T Consensus 299 -----QEGHs~~v~~iaf~~DGS-L~~tGGlD~~~RvWDlRtgr~im~L~-gH~k~I~~V~fsPNG-y~lATgs~Dn--- 367 (459)
T KOG0272|consen 299 -----QEGHSKGVFSIAFQPDGS-LAATGGLDSLGRVWDLRTGRCIMFLA-GHIKEILSVAFSPNG-YHLATGSSDN--- 367 (459)
T ss_pred -----hcccccccceeEecCCCc-eeeccCccchhheeecccCcEEEEec-ccccceeeEeECCCc-eEEeecCCCC---
Confidence 356888999999999985 99999999999999999999999999 799999999999999 8999999998
Q ss_pred cEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEE
Q 046451 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVI 323 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~l 323 (719)
+++|||+|.. ..+.++.+|..-|+.|+|+|..|.+|+|++.|++++||...++.++..+.+|.+.|.++.+++|+ .+|
T Consensus 368 t~kVWDLR~r-~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~-~~i 445 (459)
T KOG0272|consen 368 TCKVWDLRMR-SELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDS-QAI 445 (459)
T ss_pred cEEEeeeccc-ccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCC-ceE
Confidence 9999999975 56889999999999999999889999999999999999999999999999999999999999999 899
Q ss_pred EEEeCCCcEEEEe
Q 046451 324 SASSFDGKIGIYN 336 (719)
Q Consensus 324 as~s~Dg~I~iwd 336 (719)
+|+++|.+|++|.
T Consensus 446 ~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 446 ATSSFDRTIKLWR 458 (459)
T ss_pred EEeccCceeeecc
Confidence 9999999999995
No 4
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=6.6e-41 Score=329.05 Aligned_cols=315 Identities=17% Similarity=0.259 Sum_probs=272.7
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
..+|.+.|.|++|+|++ ..|++|+.|.++++||+ .+. ...++.++|...|.|++|+| |+..|
T Consensus 111 ~~GH~e~Vl~~~fsp~g--------~~l~tGsGD~TvR~WD~------~Te---Tp~~t~KgH~~WVlcvawsP-Dgk~i 172 (480)
T KOG0271|consen 111 IAGHGEAVLSVQFSPTG--------SRLVTGSGDTTVRLWDL------DTE---TPLFTCKGHKNWVLCVAWSP-DGKKI 172 (480)
T ss_pred cCCCCCcEEEEEecCCC--------ceEEecCCCceEEeecc------CCC---CcceeecCCccEEEEEEECC-Ccchh
Confidence 35799999999999998 79999999999999999 445 78899999999999999999 89999
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCC----CCcEEEEEeCCCcEEEEECCCCceeEEecCC
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK----VQHILASTSYNGTTVVWDLKKQKPVISFSES 215 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~----g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~ 215 (719)
|+|+.||+|++||-.+++.+.. ...+|...|++++|.|- +.++|++++.||.|+|||+..++++..+. +
T Consensus 173 ASG~~dg~I~lwdpktg~~~g~------~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~ls-g 245 (480)
T KOG0271|consen 173 ASGSKDGSIRLWDPKTGQQIGR------ALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLS-G 245 (480)
T ss_pred hccccCCeEEEecCCCCCcccc------cccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEec-c
Confidence 9999999999999998887533 23468889999999753 23589999999999999999999999999 9
Q ss_pred CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCC---------------------
Q 046451 216 IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCP--------------------- 274 (719)
Q Consensus 216 ~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp--------------------- 274 (719)
|...|+|+.|-.+| ++++++.|+ +|++|+... ..+++++.+|..+|+.++++-
T Consensus 246 HT~~VTCvrwGG~g--liySgS~Dr---tIkvw~a~d-G~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se 319 (480)
T KOG0271|consen 246 HTASVTCVRWGGEG--LIYSGSQDR---TIKVWRALD-GKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSE 319 (480)
T ss_pred CccceEEEEEcCCc--eEEecCCCc---eEEEEEccc-hhHHHhhcccchheeeeeccchhhhhccccccccccCCChHH
Confidence 99999999999775 899999998 999999876 478899999999999998872
Q ss_pred --------------CCCCeEEEEeCCCcEEEEECCC-CeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 275 --------------NDSSYLLTCAKDNRTICWDTVS-GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 275 --------------~d~~~l~sgs~Dg~I~iwd~~~-~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
+.++.|++|++|+++.+|+-.. .+.+..+.+|...|+.+.||||+ ++||+++.|+.|++||..+
T Consensus 320 ~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~-r~IASaSFDkSVkLW~g~t 398 (480)
T KOG0271|consen 320 EQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDG-RYIASASFDKSVKLWDGRT 398 (480)
T ss_pred HHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCc-cEEEEeecccceeeeeCCC
Confidence 1234699999999999998764 45888899999999999999999 8999999999999999999
Q ss_pred CcccccCCCCCCCCCccCcceecCC-CceeeeeCCcEEEEccCCCCCccccccccccceeeccCCCCCCC
Q 046451 340 CSRYGVGDSNFSAAPLRAPKWYKRP-AGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGMVD 408 (719)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~p~w~~~~-~~~s~s~~Gklv~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~~ 408 (719)
|+.+....... ..++..+|..+. ..++.|.|..+..|.-....+...|-||...|.+||.||||..-
T Consensus 399 Gk~lasfRGHv--~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV 466 (480)
T KOG0271|consen 399 GKFLASFRGHV--AAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRV 466 (480)
T ss_pred cchhhhhhhcc--ceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCcee
Confidence 99887544332 234566787664 44677778888888888887888899999999999999999873
No 5
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=2.7e-40 Score=329.17 Aligned_cols=272 Identities=19% Similarity=0.339 Sum_probs=246.0
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC-CCCEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF-TPNLL 139 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~-~~~~l 139 (719)
.+....|..+.|+.|+ ..|++|+.+|.++||+. .+. ..+.+|.+|++.|.++.|+|. ++..|
T Consensus 172 ~gd~rPis~~~fS~ds--------~~laT~swsG~~kvW~~------~~~---~~~~~l~gH~~~v~~~~fhP~~~~~~l 234 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDS--------KHLATGSWSGLVKVWSV------PQC---NLLQTLRGHTSRVGAAVFHPVDSDLNL 234 (459)
T ss_pred ccCCCcceeeEeecCC--------CeEEEeecCCceeEeec------CCc---ceeEEEeccccceeeEEEccCCCccce
Confidence 4567889999999998 79999999999999998 555 888999999999999999997 36799
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR 219 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~ 219 (719)
++|+.||++++|++.+...+.. ..+|...|..++|+|+| ++|++++.|.+.++||++++..+.... +|...
T Consensus 235 at~s~Dgtvklw~~~~e~~l~~-------l~gH~~RVs~VafHPsG-~~L~TasfD~tWRlWD~~tk~ElL~QE-GHs~~ 305 (459)
T KOG0272|consen 235 ATASADGTVKLWKLSQETPLQD-------LEGHLARVSRVAFHPSG-KFLGTASFDSTWRLWDLETKSELLLQE-GHSKG 305 (459)
T ss_pred eeeccCCceeeeccCCCcchhh-------hhcchhhheeeeecCCC-ceeeecccccchhhcccccchhhHhhc-ccccc
Confidence 9999999999999998765544 35688899999999998 699999999999999999998887777 99999
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI 299 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~ 299 (719)
|.+|+|++|| .++++|+.|. .-+|||+|++ .++..+.+|...|.+|.|+| +|..|+||+.|++++|||++..+.
T Consensus 306 v~~iaf~~DG-SL~~tGGlD~---~~RvWDlRtg-r~im~L~gH~k~I~~V~fsP-NGy~lATgs~Dnt~kVWDLR~r~~ 379 (459)
T KOG0272|consen 306 VFSIAFQPDG-SLAATGGLDS---LGRVWDLRTG-RCIMFLAGHIKEILSVAFSP-NGYHLATGSSDNTCKVWDLRMRSE 379 (459)
T ss_pred cceeEecCCC-ceeeccCccc---hhheeecccC-cEEEEecccccceeeEeECC-CceEEeecCCCCcEEEeeeccccc
Confidence 9999999999 5899999998 8999999997 67888999999999999999 999999999999999999999999
Q ss_pred EEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEc
Q 046451 300 VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFH 379 (719)
Q Consensus 300 ~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~ 379 (719)
+..+.+|.+.|+.|+|+|+..++|+|++.|++++||.-.+.
T Consensus 380 ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~--------------------------------------- 420 (459)
T KOG0272|consen 380 LYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTW--------------------------------------- 420 (459)
T ss_pred ceecccccchhhheEecccCCeEEEEcccCcceeeecCCCc---------------------------------------
Confidence 99999999999999999966699999999999999986553
Q ss_pred cCCCCCccccccccccceeeccCCCCCC
Q 046451 380 PKSSAGHTSENSQHAPVHGVDQSKYGMV 407 (719)
Q Consensus 380 ~~~~~~~~~~~~~~~~v~~v~~s~~~~~ 407 (719)
...+++.||.+.|++||+|+|+.-
T Consensus 421 ----~~~ksLaGHe~kV~s~Dis~d~~~ 444 (459)
T KOG0272|consen 421 ----SPLKSLAGHEGKVISLDISPDSQA 444 (459)
T ss_pred ----ccchhhcCCccceEEEEeccCCce
Confidence 345668889999999999998754
No 6
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1.9e-37 Score=295.57 Aligned_cols=289 Identities=18% Similarity=0.314 Sum_probs=254.4
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.|.++|.++.|++|.++|++++.||.+ .|||.-+..+.+.+++ ....|..++|+|.+
T Consensus 53 GH~~Ki~~~~ws~Dsr~ivSaSqDGkl----------IvWDs~TtnK~haipl-----~s~WVMtCA~sPSg-------- 109 (343)
T KOG0286|consen 53 GHLNKIYAMDWSTDSRRIVSASQDGKL----------IVWDSFTTNKVHAIPL-----PSSWVMTCAYSPSG-------- 109 (343)
T ss_pred ccccceeeeEecCCcCeEEeeccCCeE----------EEEEcccccceeEEec-----CceeEEEEEECCCC--------
Confidence 377999999999999999999888866 7899888777766654 46789999999999
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
+++|+|+-|+...||++...+... .....+.+.+|++.+.|+.|.. ...|++++.|.++.+||+++++.+..|
T Consensus 110 ~~VAcGGLdN~Csiy~ls~~d~~g---~~~v~r~l~gHtgylScC~f~d--D~~ilT~SGD~TCalWDie~g~~~~~f-- 182 (343)
T KOG0286|consen 110 NFVACGGLDNKCSIYPLSTRDAEG---NVRVSRELAGHTGYLSCCRFLD--DNHILTGSGDMTCALWDIETGQQTQVF-- 182 (343)
T ss_pred CeEEecCcCceeEEEecccccccc---cceeeeeecCccceeEEEEEcC--CCceEecCCCceEEEEEcccceEEEEe--
Confidence 899999999999999996432211 2255677999999999999975 578999999999999999999887664
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
.+|.+.|.+|++.|...+.+++|+.|+..+|||+|.+.++.+|. +|...|++++|.|+| .-|++|++|+ +
T Consensus 183 -----~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~-ghesDINsv~ffP~G-~afatGSDD~---t 252 (343)
T KOG0286|consen 183 -----HGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFE-GHESDINSVRFFPSG-DAFATGSDDA---T 252 (343)
T ss_pred -----cCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeec-ccccccceEEEccCC-CeeeecCCCc---e
Confidence 46899999999999556899999999999999999999999999 999999999999999 5799999998 9
Q ss_pred EEEEecCCCCCceEEee--CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCE
Q 046451 245 LRLWDMRNTMSPVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGV 322 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~--~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~ 322 (719)
.++||+|... .+..+. ....+|++++||- .|++|++|..|.++.+||.-.++.+..+.+|.+.|.++..+||| .-
T Consensus 253 cRlyDlRaD~-~~a~ys~~~~~~gitSv~FS~-SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG-~a 329 (343)
T KOG0286|consen 253 CRLYDLRADQ-ELAVYSHDSIICGITSVAFSK-SGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDG-MA 329 (343)
T ss_pred eEEEeecCCc-EEeeeccCcccCCceeEEEcc-cccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCC-cE
Confidence 9999999863 344443 2345899999999 99999999999999999999999999999999999999999999 89
Q ss_pred EEEEeCCCcEEEEe
Q 046451 323 ISASSFDGKIGIYN 336 (719)
Q Consensus 323 las~s~Dg~I~iwd 336 (719)
+++|++|..|+||.
T Consensus 330 v~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 330 VATGSWDSTLRIWA 343 (343)
T ss_pred EEecchhHheeecC
Confidence 99999999999994
No 7
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=9.2e-37 Score=302.58 Aligned_cols=284 Identities=20% Similarity=0.401 Sum_probs=246.0
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
...|..|.|.|+|+.|++|+..|.+ .+|+...-.-+ .....|+..|.++.|+.++ .+
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEF----------tLWNg~~fnFE-----tilQaHDs~Vr~m~ws~~g--------~w 152 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEF----------TLWNGTSFNFE-----TILQAHDSPVRTMKWSHNG--------TW 152 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccE----------EEecCceeeHH-----HHhhhhcccceeEEEccCC--------CE
Confidence 3568889999999999999998887 66765322111 1125699999999999998 79
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeecccc-CCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHK-GPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+++|+.+|.|++|+..- ..++.+..|. ..|++++|+| +...|++|+.||+|+|||....+..+. +
T Consensus 153 miSgD~gG~iKyWqpnm----------nnVk~~~ahh~eaIRdlafSp-nDskF~t~SdDg~ikiWdf~~~kee~v---L 218 (464)
T KOG0284|consen 153 MISGDKGGMIKYWQPNM----------NNVKIIQAHHAEAIRDLAFSP-NDSKFLTCSDDGTIKIWDFRMPKEERV---L 218 (464)
T ss_pred EEEcCCCceEEecccch----------hhhHHhhHhhhhhhheeccCC-CCceeEEecCCCeEEEEeccCCchhhe---e
Confidence 99999999999999732 4455555555 9999999999 678999999999999999998776555 3
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
.+|.-.|.+++|+|.. .+|++++.|..|++||.+++.++.++. .|+..|..+.|++++ .+|++++.|. .+
T Consensus 219 ----~GHgwdVksvdWHP~k-gLiasgskDnlVKlWDprSg~cl~tlh-~HKntVl~~~f~~n~-N~Llt~skD~---~~ 288 (464)
T KOG0284|consen 219 ----RGHGWDVKSVDWHPTK-GLIASGSKDNLVKLWDPRSGSCLATLH-GHKNTVLAVKFNPNG-NWLLTGSKDQ---SC 288 (464)
T ss_pred ----ccCCCCcceeccCCcc-ceeEEccCCceeEeecCCCcchhhhhh-hccceEEEEEEcCCC-CeeEEccCCc---eE
Confidence 4688899999999996 599999999999999999999999998 899999999999999 7999999998 89
Q ss_pred EEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec-CCCCCeEEeEEcCCCCCEEE
Q 046451 246 RLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP-AGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~-~h~~~v~~l~~spdg~~~la 324 (719)
++||+|+ .+.+..+.+|...|+++.|+|-...+|.+|+.||.|..|.+...+.+..+. +|...|++++|+|-| .+|+
T Consensus 289 kv~DiR~-mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlG-hil~ 366 (464)
T KOG0284|consen 289 KVFDIRT-MKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLG-HILA 366 (464)
T ss_pred EEEehhH-hHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCcccccceeeeeccccc-eeEe
Confidence 9999995 366888999999999999999889999999999999999998666665554 789999999999999 8999
Q ss_pred EEeCCCcEEEEeCCC
Q 046451 325 ASSFDGKIGIYNIEG 339 (719)
Q Consensus 325 s~s~Dg~I~iwd~~~ 339 (719)
+|+.|.++++|.-..
T Consensus 367 tgsnd~t~rfw~r~r 381 (464)
T KOG0284|consen 367 TGSNDRTVRFWTRNR 381 (464)
T ss_pred ecCCCcceeeeccCC
Confidence 999999999998543
No 8
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=2e-35 Score=298.04 Aligned_cols=322 Identities=24% Similarity=0.421 Sum_probs=265.9
Q ss_pred cccCccceEEEcCCCC-eEEEeeccceeecccCCCceEEEEEeeccC--Cccccee-------ecccCCCCCceeeeecC
Q 046451 5 KGINRSASVAFAPDAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQS--EDRDLLL-------VGESPSSERFNRLAWGK 74 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~-~Latgs~dG~v~v~~s~~~~i~iwd~~~~~--~~~~~~~-------~~~~~~~~~V~~l~~sp 74 (719)
+|...|.+++|+|-.. +||+|+.+-.. ++|++.... ....+.+ .........|++|+|+.
T Consensus 176 ~~~~~V~~~~WnP~~~~llasg~~~s~a----------ri~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~ 245 (524)
T KOG0273|consen 176 RHESEVFICAWNPLRDGLLASGSGDSTA----------RIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNN 245 (524)
T ss_pred cCCCceEEEecCchhhhhhhccCCccce----------eeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecC
Confidence 4667899999999776 89998765544 777776311 1111111 12334567899999999
Q ss_pred CCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCC
Q 046451 75 NGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLS 154 (719)
Q Consensus 75 ~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~ 154 (719)
+| .+||+|+.||.++||+. .+ ..+.++..|+++|.+|.|+. ++++|++++.|+++.+||..
T Consensus 246 ~G--------~~LatG~~~G~~riw~~-------~G---~l~~tl~~HkgPI~slKWnk-~G~yilS~~vD~ttilwd~~ 306 (524)
T KOG0273|consen 246 DG--------TLLATGSEDGEARIWNK-------DG---NLISTLGQHKGPIFSLKWNK-KGTYILSGGVDGTTILWDAH 306 (524)
T ss_pred CC--------CeEEEeecCcEEEEEec-------Cc---hhhhhhhccCCceEEEEEcC-CCCEEEeccCCccEEEEecc
Confidence 99 79999999999999996 45 88899999999999999999 89999999999999999998
Q ss_pred CCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEE
Q 046451 155 APAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLV 234 (719)
Q Consensus 155 ~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~ 234 (719)
++.....| ..|...-.++.|-.+. .|++++.||.|+|+.+...+++.++. +|.+.|.+|.|++.| .+|+
T Consensus 307 ~g~~~q~f-------~~~s~~~lDVdW~~~~--~F~ts~td~~i~V~kv~~~~P~~t~~-GH~g~V~alk~n~tg-~LLa 375 (524)
T KOG0273|consen 307 TGTVKQQF-------EFHSAPALDVDWQSND--EFATSSTDGCIHVCKVGEDRPVKTFI-GHHGEVNALKWNPTG-SLLA 375 (524)
T ss_pred CceEEEee-------eeccCCccceEEecCc--eEeecCCCceEEEEEecCCCcceeee-cccCceEEEEECCCC-ceEE
Confidence 88765553 2244455788997774 69999999999999999999999999 799999999999998 5899
Q ss_pred EEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCC--------CCCeEEEEeCCCcEEEEECCCCeEEEEecCC
Q 046451 235 VASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPN--------DSSYLLTCAKDNRTICWDTVSGEIVSELPAG 306 (719)
Q Consensus 235 ~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~--------d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h 306 (719)
++++|+ +++||..... .....+.+|...|..+.|+|. ++..|++++.|++|++||+..+.+++.|..|
T Consensus 376 S~SdD~---TlkiWs~~~~-~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH 451 (524)
T KOG0273|consen 376 SCSDDG---TLKIWSMGQS-NSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKH 451 (524)
T ss_pred EecCCC---eeEeeecCCC-cchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccC
Confidence 999998 9999998664 567889999999999999983 3568999999999999999999999999999
Q ss_pred CCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCC
Q 046451 307 TNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 307 ~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
...|++++|+|+| .++|+|+.||.|.||++.+++++......-. .-.++|+++|..++....++
T Consensus 452 ~~pVysvafS~~g-~ylAsGs~dg~V~iws~~~~~l~~s~~~~~~------------Ifel~Wn~~G~kl~~~~sd~ 515 (524)
T KOG0273|consen 452 QEPVYSVAFSPNG-RYLASGSLDGCVHIWSTKTGKLVKSYQGTGG------------IFELCWNAAGDKLGACASDG 515 (524)
T ss_pred CCceEEEEecCCC-cEEEecCCCCeeEeccccchheeEeecCCCe------------EEEEEEcCCCCEEEEEecCC
Confidence 9999999999999 8999999999999999999998773222111 12368888887666554444
No 9
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=2.5e-34 Score=268.25 Aligned_cols=278 Identities=18% Similarity=0.313 Sum_probs=236.9
Q ss_pred CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEE
Q 046451 20 PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIW 99 (719)
Q Consensus 20 ~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lw 99 (719)
-+||+++.|-+| ++|...++.+..++ ...+..|+.|...+++ +.||+++ .-.|++|
T Consensus 11 viLvsA~YDhTI----------RfWqa~tG~C~rTi-----qh~dsqVNrLeiTpdk--------~~LAaa~-~qhvRly 66 (311)
T KOG0315|consen 11 VILVSAGYDHTI----------RFWQALTGICSRTI-----QHPDSQVNRLEITPDK--------KDLAAAG-NQHVRLY 66 (311)
T ss_pred eEEEeccCccee----------eeeehhcCeEEEEE-----ecCccceeeEEEcCCc--------chhhhcc-CCeeEEE
Confidence 478888877666 88998888776554 2356789999999997 6777765 5679999
Q ss_pred cCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEE
Q 046451 100 NPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179 (719)
Q Consensus 100 d~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l 179 (719)
|+.+. .. ..+.++.+|+..|..+.|.. +++.+++|++||+++|||++.....+.| .|.+.|+++
T Consensus 67 D~~S~----np---~Pv~t~e~h~kNVtaVgF~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~--------~~~spVn~v 130 (311)
T KOG0315|consen 67 DLNSN----NP---NPVATFEGHTKNVTAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNY--------QHNSPVNTV 130 (311)
T ss_pred EccCC----CC---CceeEEeccCCceEEEEEee-cCeEEEecCCCceEEEEeccCcccchhc--------cCCCCcceE
Confidence 99542 22 58899999999999999998 8999999999999999999986655543 356799999
Q ss_pred EecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC-----
Q 046451 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM----- 254 (719)
Q Consensus 180 ~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~----- 254 (719)
..+|+ +..|++|..+|.|++||+.+..+...+.......|.++...+||+ +++.+.+.| ..++|++-+..
T Consensus 131 vlhpn-QteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgs-ml~a~nnkG---~cyvW~l~~~~~~s~l 205 (311)
T KOG0315|consen 131 VLHPN-QTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGS-MLAAANNKG---NCYVWRLLNHQTASEL 205 (311)
T ss_pred EecCC-cceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCc-EEEEecCCc---cEEEEEccCCCccccc
Confidence 99999 468999999999999999998777777656678899999999995 666666666 89999986532
Q ss_pred CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC-eEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEE
Q 046451 255 SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG-EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333 (719)
Q Consensus 255 ~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~-~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~ 333 (719)
+++..+..|.+.+..+.+|| |+++|++++.|.+++||++++. +....+++|..|+++++||-|| .+|+|++.|+.++
T Consensus 206 ~P~~k~~ah~~~il~C~lSP-d~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg-~YlvTassd~~~r 283 (311)
T KOG0315|consen 206 EPVHKFQAHNGHILRCLLSP-DVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADG-EYLVTASSDHTAR 283 (311)
T ss_pred eEhhheecccceEEEEEECC-CCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCc-cEEEecCCCCcee
Confidence 45677899999999999999 9999999999999999999887 6667788999999999999999 7999999999999
Q ss_pred EEeCCCCcccc
Q 046451 334 IYNIEGCSRYG 344 (719)
Q Consensus 334 iwd~~~~~~~~ 344 (719)
+|+++.++.+.
T Consensus 284 lW~~~~~k~v~ 294 (311)
T KOG0315|consen 284 LWDLSAGKEVR 294 (311)
T ss_pred ecccccCceee
Confidence 99999998766
No 10
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-34 Score=271.06 Aligned_cols=291 Identities=16% Similarity=0.280 Sum_probs=242.2
Q ss_pred cccCccceEEEcCCC-CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 5 KGINRSASVAFAPDA-PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 5 ~~~~~V~~vafSpdg-~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
.|.+.|..++..+.+ ..|..+++|..+ .+|++...............+|+..|..+..++||
T Consensus 13 gh~d~Vt~la~~~~~~~~l~sasrDk~i----------i~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg------- 75 (315)
T KOG0279|consen 13 GHTDWVTALAIKIKNSDILVSASRDKTI----------IVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDG------- 75 (315)
T ss_pred CCCceEEEEEeecCCCceEEEcccceEE----------EEEEeccCccccCceeeeeeccceEecceEEccCC-------
Confidence 366889999998875 567777666554 78998877655555556677899999999999999
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
++.++++.|+.+++||+ ..+ +....|.+|...|.+++|++ |.+.|++|+.|.+|++||+.......
T Consensus 76 -~~alS~swD~~lrlWDl------~~g---~~t~~f~GH~~dVlsva~s~-dn~qivSGSrDkTiklwnt~g~ck~t--- 141 (315)
T KOG0279|consen 76 -NFALSASWDGTLRLWDL------ATG---ESTRRFVGHTKDVLSVAFST-DNRQIVSGSRDKTIKLWNTLGVCKYT--- 141 (315)
T ss_pred -ceEEeccccceEEEEEe------cCC---cEEEEEEecCCceEEEEecC-CCceeecCCCcceeeeeeecccEEEE---
Confidence 79999999999999999 666 88899999999999999999 78999999999999999988654321
Q ss_pred CccCCCCCCCCCeEEEEecCCC-CcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKV-QHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSS 242 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g-~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~ 242 (719)
.....+++.|+|++|+|+. ..+|++++.|++|++||+++.+....+. +|.+.++.++++||| .++++|+.|+
T Consensus 142 ---~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~-gh~~~v~t~~vSpDG-slcasGgkdg-- 214 (315)
T KOG0279|consen 142 ---IHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFI-GHSGYVNTVTVSPDG-SLCASGGKDG-- 214 (315)
T ss_pred ---EecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccc-cccccEEEEEECCCC-CEEecCCCCc--
Confidence 1222337799999999984 4689999999999999999999888888 899999999999999 5888888888
Q ss_pred CcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCC---------CCCeEEe
Q 046451 243 PALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAG---------TNWNFDI 313 (719)
Q Consensus 243 ~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h---------~~~v~~l 313 (719)
.+.+||++.+ +.+..+ +|...|.+++|+| + ++.++...+..|+|||+.++.++.+++-. .-...++
T Consensus 215 -~~~LwdL~~~-k~lysl-~a~~~v~sl~fsp-n-rywL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clsl 289 (315)
T KOG0279|consen 215 -EAMLWDLNEG-KNLYSL-EAFDIVNSLCFSP-N-RYWLCAATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSL 289 (315)
T ss_pred -eEEEEEccCC-ceeEec-cCCCeEeeEEecC-C-ceeEeeccCCceEEEeccchhhhhhccccccccccccCCcEEEEE
Confidence 9999999876 445555 4778999999999 5 45555556667999999999888776521 2346789
Q ss_pred EEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 314 HWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 314 ~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
+|+.|| ..|++|-.|+.|++|.+..
T Consensus 290 aws~dG-~tLf~g~td~~irv~qv~~ 314 (315)
T KOG0279|consen 290 AWSADG-QTLFAGYTDNVIRVWQVAK 314 (315)
T ss_pred EEcCCC-cEEEeeecCCcEEEEEeec
Confidence 999999 7999999999999998753
No 11
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=9.4e-34 Score=285.95 Aligned_cols=282 Identities=21% Similarity=0.446 Sum_probs=247.0
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
....|++++|+.||.+||+|+.||.+ +||+.+... +.....|++.|.+|.|+.+| .
T Consensus 234 ~nkdVT~L~Wn~~G~~LatG~~~G~~----------riw~~~G~l------~~tl~~HkgPI~slKWnk~G--------~ 289 (524)
T KOG0273|consen 234 SNKDVTSLDWNNDGTLLATGSEDGEA----------RIWNKDGNL------ISTLGQHKGPIFSLKWNKKG--------T 289 (524)
T ss_pred ccCCcceEEecCCCCeEEEeecCcEE----------EEEecCchh------hhhhhccCCceEEEEEcCCC--------C
Confidence 34779999999999999999988877 788877332 12235699999999999998 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|++++.||++.|||. .++ .....+..|.....++.|-. ...|++++.|+.|+|+.+.....+.++
T Consensus 290 yilS~~vD~ttilwd~------~~g---~~~q~f~~~s~~~lDVdW~~--~~~F~ts~td~~i~V~kv~~~~P~~t~--- 355 (524)
T KOG0273|consen 290 YILSGGVDGTTILWDA------HTG---TVKQQFEFHSAPALDVDWQS--NDEFATSSTDGCIHVCKVGEDRPVKTF--- 355 (524)
T ss_pred EEEeccCCccEEEEec------cCc---eEEEeeeeccCCccceEEec--CceEeecCCCceEEEEEecCCCcceee---
Confidence 9999999999999998 566 77778888888878899964 578999999999999999888776653
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCC--------CcEEEEEe
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDV--------ATQLVVAS 237 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g--------~~~l~~~s 237 (719)
.+|.+.|.++.|++.| .+|+++++|++++||+.........+. .|...|..+.|+|+| ...+++++
T Consensus 356 ----~GH~g~V~alk~n~tg-~LLaS~SdD~TlkiWs~~~~~~~~~l~-~Hskei~t~~wsp~g~v~~n~~~~~~l~sas 429 (524)
T KOG0273|consen 356 ----IGHHGEVNALKWNPTG-SLLASCSDDGTLKIWSMGQSNSVHDLQ-AHSKEIYTIKWSPTGPVTSNPNMNLMLASAS 429 (524)
T ss_pred ----ecccCceEEEEECCCC-ceEEEecCCCeeEeeecCCCcchhhhh-hhccceeeEeecCCCCccCCCcCCceEEEee
Confidence 3588999999999998 599999999999999999998888888 899999999999875 35688888
Q ss_pred CCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcC
Q 046451 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYP 317 (719)
Q Consensus 238 ~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~sp 317 (719)
.|+ +|++||+..+ .++..|..|...|++++|+| ++++|++|+.||.|.||++++++.++.+.+.. .|+.++|+-
T Consensus 430 ~ds---tV~lwdv~~g-v~i~~f~kH~~pVysvafS~-~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~-~Ifel~Wn~ 503 (524)
T KOG0273|consen 430 FDS---TVKLWDVESG-VPIHTLMKHQEPVYSVAFSP-NGRYLASGSLDGCVHIWSTKTGKLVKSYQGTG-GIFELCWNA 503 (524)
T ss_pred cCC---eEEEEEccCC-ceeEeeccCCCceEEEEecC-CCcEEEecCCCCeeEeccccchheeEeecCCC-eEEEEEEcC
Confidence 888 9999999875 78999999999999999999 99999999999999999999999999987654 499999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCC
Q 046451 318 KIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 318 dg~~~las~s~Dg~I~iwd~~ 338 (719)
+| ..|..+-.|+.+++.|+.
T Consensus 504 ~G-~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 504 AG-DKLGACASDGSVCVLDLR 523 (524)
T ss_pred CC-CEEEEEecCCCceEEEec
Confidence 99 677666679999999875
No 12
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-34 Score=271.36 Aligned_cols=294 Identities=20% Similarity=0.377 Sum_probs=251.6
Q ss_pred cceEEEcCCC-CeEE--EeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 10 SASVAFAPDA-PYMA--AGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 10 V~~vafSpdg-~~La--tgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
=+++.|||-- ++|| ++..-|.. .++.+.|.+++. ...+....+....+.+.+++|+++.+ +.
T Consensus 11 GysvqfSPf~~nrLavAt~q~yGl~-----G~G~L~ile~~~---~~gi~e~~s~d~~D~LfdV~Wse~~e-------~~ 75 (311)
T KOG0277|consen 11 GYSVQFSPFVENRLAVATAQHYGLA-----GNGRLFILEVTD---PKGIQECQSYDTEDGLFDVAWSENHE-------NQ 75 (311)
T ss_pred cceeEecccccchhheeehhhcccc-----cCceEEEEecCC---CCCeEEEEeeecccceeEeeecCCCc-------ce
Confidence 4689999942 3444 44444543 677888888762 33444566677889999999999875 78
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCcc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~ 166 (719)
+++++.||+++|||+. ... ..+..++.|...|.++.|+..+++.+++++.|++|++||....+.+.+|
T Consensus 76 ~~~a~GDGSLrl~d~~-----~~s---~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf---- 143 (311)
T KOG0277|consen 76 VIAASGDGSLRLFDLT-----MPS---KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTF---- 143 (311)
T ss_pred EEEEecCceEEEeccC-----CCC---cchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEee----
Confidence 9999999999999963 222 6788999999999999999988889999999999999999988877663
Q ss_pred CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEE
Q 046451 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALR 246 (719)
Q Consensus 167 ~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~ 246 (719)
.+|...|....|+|...+++++++.|+++++||++.......+. .|...|.++.|+....+++++++.|+ .|+
T Consensus 144 ---~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~-ah~~Eil~cdw~ky~~~vl~Tg~vd~---~vr 216 (311)
T KOG0277|consen 144 ---NGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIE-AHNSEILCCDWSKYNHNVLATGGVDN---LVR 216 (311)
T ss_pred ---cCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEE-eccceeEeecccccCCcEEEecCCCc---eEE
Confidence 45888999999999999999999999999999999755444466 78899999999999999999999998 999
Q ss_pred EEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC-eEEEEecCCCCCeEEeEEcCCCCCEEEE
Q 046451 247 LWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG-EIVSELPAGTNWNFDIHWYPKIPGVISA 325 (719)
Q Consensus 247 lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~-~~~~~l~~h~~~v~~l~~spdg~~~las 325 (719)
+||+|+-+.++.++.+|.-.|..++|||....+|++++.|-+++|||...+ ..+.+.+.|+..+..+.|+.-.+.++|+
T Consensus 217 ~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs 296 (311)
T KOG0277|consen 217 GWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVAS 296 (311)
T ss_pred EEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeee
Confidence 999999999999999999999999999988889999999999999999854 4566677899999999999988899999
Q ss_pred EeCCCcEEEEeC
Q 046451 326 SSFDGKIGIYNI 337 (719)
Q Consensus 326 ~s~Dg~I~iwd~ 337 (719)
+++|+.++||+-
T Consensus 297 ~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 297 TGWDELLYVWNP 308 (311)
T ss_pred cccccceeeecc
Confidence 999999999983
No 13
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-33 Score=265.60 Aligned_cols=290 Identities=18% Similarity=0.249 Sum_probs=234.9
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
..+|.+.|+.++..+.+. ++|+++++|..+.+|++..... ..+ ...+.+.+|...|..+..++ |++++
T Consensus 11 l~gh~d~Vt~la~~~~~~-------~~l~sasrDk~ii~W~L~~dd~-~~G---~~~r~~~GHsH~v~dv~~s~-dg~~a 78 (315)
T KOG0279|consen 11 LEGHTDWVTALAIKIKNS-------DILVSASRDKTIIVWKLTSDDI-KYG---VPVRRLTGHSHFVSDVVLSS-DGNFA 78 (315)
T ss_pred ecCCCceEEEEEeecCCC-------ceEEEcccceEEEEEEeccCcc-ccC---ceeeeeeccceEecceEEcc-CCceE
Confidence 357999999999988854 7999999999999999965322 344 67899999999999999999 89999
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR 219 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~ 219 (719)
++++.|+++++||+.+++..+.| .+|...|.+++|+++. ..+++|+.|.+|++||+............+...
T Consensus 79 lS~swD~~lrlWDl~~g~~t~~f-------~GH~~dVlsva~s~dn-~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~W 150 (315)
T KOG0279|consen 79 LSASWDGTLRLWDLATGESTRRF-------VGHTKDVLSVAFSTDN-RQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREW 150 (315)
T ss_pred EeccccceEEEEEecCCcEEEEE-------EecCCceEEEEecCCC-ceeecCCCcceeeeeeecccEEEEEecCCCcCc
Confidence 99999999999999998766553 4588899999999996 699999999999999998554443333234899
Q ss_pred eeEEEECCCC-CcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 220 CSVLQWNPDV-ATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 220 i~~l~~sp~g-~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
|+|+.|+|+. +-+|++++.|+ +|++||+++. +....+.+|.+.++.+.+|| ||.++++|+.||.+.+||++.++
T Consensus 151 VscvrfsP~~~~p~Ivs~s~Dk---tvKvWnl~~~-~l~~~~~gh~~~v~t~~vSp-DGslcasGgkdg~~~LwdL~~~k 225 (315)
T KOG0279|consen 151 VSCVRFSPNESNPIIVSASWDK---TVKVWNLRNC-QLRTTFIGHSGYVNTVTVSP-DGSLCASGGKDGEAMLWDLNEGK 225 (315)
T ss_pred EEEEEEcCCCCCcEEEEccCCc---eEEEEccCCc-chhhccccccccEEEEEECC-CCCEEecCCCCceEEEEEccCCc
Confidence 9999999995 46788999998 9999999875 66788999999999999999 99999999999999999999999
Q ss_pred EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEE
Q 046451 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSF 378 (719)
Q Consensus 299 ~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~ 378 (719)
.++.+ .|...|.+++|+|+. ..|+.+. +..|+|||++++..+....-++.....+.- -..-..++|+.||.-+..
T Consensus 226 ~lysl-~a~~~v~sl~fspnr-ywL~~at-~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~--~~~clslaws~dG~tLf~ 300 (315)
T KOG0279|consen 226 NLYSL-EAFDIVNSLCFSPNR-YWLCAAT-ATSIKIWDLESKAVVEELKLDGIGPSSKAG--DPICLSLAWSADGQTLFA 300 (315)
T ss_pred eeEec-cCCCeEeeEEecCCc-eeEeecc-CCceEEEeccchhhhhhccccccccccccC--CcEEEEEEEcCCCcEEEe
Confidence 98887 566779999999997 5666655 667999999999887744433332200000 000134677777765544
Q ss_pred c
Q 046451 379 H 379 (719)
Q Consensus 379 ~ 379 (719)
+
T Consensus 301 g 301 (315)
T KOG0279|consen 301 G 301 (315)
T ss_pred e
Confidence 3
No 14
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=9.6e-33 Score=260.99 Aligned_cols=289 Identities=19% Similarity=0.341 Sum_probs=236.7
Q ss_pred cccCccceEEEcCC-CCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 5 KGINRSASVAFAPD-APYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 5 ~~~~~V~~vafSpd-g~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
.|.+++..++|+|- |..||+|+.|..| +||++... ..-....+....|+..|.+++|+|.|
T Consensus 12 gh~~r~W~~awhp~~g~ilAscg~Dk~v----------riw~~~~~-~s~~ck~vld~~hkrsVRsvAwsp~g------- 73 (312)
T KOG0645|consen 12 GHKDRVWSVAWHPGKGVILASCGTDKAV----------RIWSTSSG-DSWTCKTVLDDGHKRSVRSVAWSPHG------- 73 (312)
T ss_pred CCCCcEEEEEeccCCceEEEeecCCceE----------EEEecCCC-CcEEEEEeccccchheeeeeeecCCC-------
Confidence 36689999999998 8999999877666 77877641 12222223344799999999999999
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
++|++++.|.++.||.- .+..++++..+.+|...|.|++|+. ++++||+|++|..|.||.+..+.......
T Consensus 74 -~~La~aSFD~t~~Iw~k-------~~~efecv~~lEGHEnEVK~Vaws~-sG~~LATCSRDKSVWiWe~deddEfec~a 144 (312)
T KOG0645|consen 74 -RYLASASFDATVVIWKK-------EDGEFECVATLEGHENEVKCVAWSA-SGNYLATCSRDKSVWIWEIDEDDEFECIA 144 (312)
T ss_pred -cEEEEeeccceEEEeec-------CCCceeEEeeeeccccceeEEEEcC-CCCEEEEeeCCCeEEEEEecCCCcEEEEe
Confidence 89999999999999984 3444588999999999999999999 89999999999999999998666544432
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC---CceeEEecCCCCCceeEEEECCCCCcEEEEEeCCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK---QKPVISFSESIKRRCSVLQWNPDVATQLVVASDED 240 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~---~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~ 240 (719)
....|...|..+.|+|.. .+|++++.|.+|++|+-.. ..+..++. +|...|.+++|++.| ..++++++|+
T Consensus 145 ----VL~~HtqDVK~V~WHPt~-dlL~S~SYDnTIk~~~~~~dddW~c~~tl~-g~~~TVW~~~F~~~G-~rl~s~sdD~ 217 (312)
T KOG0645|consen 145 ----VLQEHTQDVKHVIWHPTE-DLLFSCSYDNTIKVYRDEDDDDWECVQTLD-GHENTVWSLAFDNIG-SRLVSCSDDG 217 (312)
T ss_pred ----eeccccccccEEEEcCCc-ceeEEeccCCeEEEEeecCCCCeeEEEEec-CccceEEEEEecCCC-ceEEEecCCc
Confidence 334588899999999985 5999999999999998772 35778888 788899999999998 5799999998
Q ss_pred CCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC------eEEE-EecCCCCCeEEe
Q 046451 241 SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG------EIVS-ELPAGTNWNFDI 313 (719)
Q Consensus 241 ~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~------~~~~-~l~~h~~~v~~l 313 (719)
+|+||-+...- -..|+..++.+.|. ...|++++.|+.|++|..... +.+. .-..|...|+++
T Consensus 218 ---tv~Iw~~~~~~-----~~~~sr~~Y~v~W~---~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV 286 (312)
T KOG0645|consen 218 ---TVSIWRLYTDL-----SGMHSRALYDVPWD---NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSV 286 (312)
T ss_pred ---ceEeeeeccCc-----chhcccceEeeeec---ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceE
Confidence 99999976431 12377899999997 468999999999999976542 1222 224688899999
Q ss_pred EEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 314 HWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 314 ~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
.|+|....+|++|+.||.|++|.+.
T Consensus 287 ~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 287 QWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred EEcCCCCCceeecCCCceEEEEEec
Confidence 9999766899999999999999875
No 15
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1.1e-32 Score=263.00 Aligned_cols=257 Identities=15% Similarity=0.242 Sum_probs=225.7
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
..+|...|.++.|++|. ++|++++.||.+.|||. -+. .....+.-....|..++|+| .++++
T Consensus 51 LkGH~~Ki~~~~ws~Ds--------r~ivSaSqDGklIvWDs------~Tt---nK~haipl~s~WVMtCA~sP-Sg~~V 112 (343)
T KOG0286|consen 51 LKGHLNKIYAMDWSTDS--------RRIVSASQDGKLIVWDS------FTT---NKVHAIPLPSSWVMTCAYSP-SGNFV 112 (343)
T ss_pred ecccccceeeeEecCCc--------CeEEeeccCCeEEEEEc------ccc---cceeEEecCceeEEEEEECC-CCCeE
Confidence 36799999999999998 89999999999999998 344 55666777788999999999 89999
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR 219 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~ 219 (719)
|+|+-|+...||++.+.+...... ......+|.+.+.|+.|-.++ .|++++.|.++.+||+++++.+..|. +|.+.
T Consensus 113 AcGGLdN~Csiy~ls~~d~~g~~~-v~r~l~gHtgylScC~f~dD~--~ilT~SGD~TCalWDie~g~~~~~f~-GH~gD 188 (343)
T KOG0286|consen 113 ACGGLDNKCSIYPLSTRDAEGNVR-VSRELAGHTGYLSCCRFLDDN--HILTGSGDMTCALWDIETGQQTQVFH-GHTGD 188 (343)
T ss_pred EecCcCceeEEEecccccccccce-eeeeecCccceeEEEEEcCCC--ceEecCCCceEEEEEcccceEEEEec-CCccc
Confidence 999999999999998663221111 333456799999999999874 79999999999999999999999999 99999
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI 299 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~ 299 (719)
|.+++++|...+.|++|+.|+ ..+|||+|.+ .++.+|.+|+..|++|+|.| +|.-|++|++|++.++||++....
T Consensus 189 V~slsl~p~~~ntFvSg~cD~---~aklWD~R~~-~c~qtF~ghesDINsv~ffP-~G~afatGSDD~tcRlyDlRaD~~ 263 (343)
T KOG0286|consen 189 VMSLSLSPSDGNTFVSGGCDK---SAKLWDVRSG-QCVQTFEGHESDINSVRFFP-SGDAFATGSDDATCRLYDLRADQE 263 (343)
T ss_pred EEEEecCCCCCCeEEeccccc---ceeeeeccCc-ceeEeecccccccceEEEcc-CCCeeeecCCCceeEEEeecCCcE
Confidence 999999994447899999998 8999999986 78999999999999999999 999999999999999999999988
Q ss_pred EEEecCC--CCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 300 VSELPAG--TNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 300 ~~~l~~h--~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+..+... ...|++++||-.| ++|.+|..|.++.+||.-.++.+.
T Consensus 264 ~a~ys~~~~~~gitSv~FS~SG-RlLfagy~d~~c~vWDtlk~e~vg 309 (343)
T KOG0286|consen 264 LAVYSHDSIICGITSVAFSKSG-RLLFAGYDDFTCNVWDTLKGERVG 309 (343)
T ss_pred EeeeccCcccCCceeEEEcccc-cEEEeeecCCceeEeeccccceEE
Confidence 8887642 3479999999999 899999999999999988877755
No 16
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.5e-33 Score=298.41 Aligned_cols=365 Identities=18% Similarity=0.221 Sum_probs=290.7
Q ss_pred cccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCC
Q 046451 3 CIKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDF 82 (719)
Q Consensus 3 ~l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~ 82 (719)
+..|...|..++|+|.|.+||+|+.||.| +|||+..+.... ...+|.+.|.++.|+++-.
T Consensus 101 Ka~He~Pvi~ma~~~~g~LlAtggaD~~v----------~VWdi~~~~~th-----~fkG~gGvVssl~F~~~~~----- 160 (775)
T KOG0319|consen 101 KAIHEAPVITMAFDPTGTLLATGGADGRV----------KVWDIKNGYCTH-----SFKGHGGVVSSLLFHPHWN----- 160 (775)
T ss_pred hhccCCCeEEEEEcCCCceEEeccccceE----------EEEEeeCCEEEE-----EecCCCceEEEEEeCCccc-----
Confidence 44577889999999999999999998877 899999765543 3467999999999999862
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCcc
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF 162 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~ 162 (719)
..+|++|..|+.+++||+.+ .. .++..+..|.+.|+++.|++ |+..++++++|..+.|||+.+.+....+
T Consensus 161 -~~lL~sg~~D~~v~vwnl~~-----~~---tcl~~~~~H~S~vtsL~~~~-d~~~~ls~~RDkvi~vwd~~~~~~l~~l 230 (775)
T KOG0319|consen 161 -RWLLASGATDGTVRVWNLND-----KR---TCLHTMILHKSAVTSLAFSE-DSLELLSVGRDKVIIVWDLVQYKKLKTL 230 (775)
T ss_pred -hhheeecCCCceEEEEEccc-----Cc---hHHHHHHhhhhheeeeeecc-CCceEEEeccCcEEEEeehhhhhhhhee
Confidence 25889999999999999942 22 36788899999999999999 6888999999999999987432211111
Q ss_pred CCc-----------------------------------------------------------------------------
Q 046451 163 PPL----------------------------------------------------------------------------- 165 (719)
Q Consensus 163 ~~l----------------------------------------------------------------------------- 165 (719)
+..
T Consensus 231 p~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~ 310 (775)
T KOG0319|consen 231 PLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDE 310 (775)
T ss_pred chhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEc
Confidence 000
Q ss_pred -----c------------------------------------------CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcE
Q 046451 166 -----R------------------------------------------GNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198 (719)
Q Consensus 166 -----~------------------------------------------~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I 198 (719)
. ....+|.+.|.+++...+| .+|++|+.|.++
T Consensus 311 ~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g-~llat~sKD~sv 389 (775)
T KOG0319|consen 311 DELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSG-DLLATGSKDKSV 389 (775)
T ss_pred cccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccC-cEEEEecCCceE
Confidence 0 0112345555566633444 589999999999
Q ss_pred EEEECCCCc----eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC----ceE----EeeCCCCC
Q 046451 199 VVWDLKKQK----PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS----PVK----EFVGHTKG 266 (719)
Q Consensus 199 ~iwd~~~~~----~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~----~~~----~~~~h~~~ 266 (719)
++|.++++. ++.... +|...|.+++++..+..+|++++.|. +|++|++..... .+. +...|...
T Consensus 390 ilWr~~~~~~~~~~~a~~~-gH~~svgava~~~~~asffvsvS~D~---tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKd 465 (775)
T KOG0319|consen 390 ILWRLNNNCSKSLCVAQAN-GHTNSVGAVAGSKLGASFFVSVSQDC---TLKLWDLPKSKETAFPIVLTCRYTERAHDKD 465 (775)
T ss_pred EEEEecCCcchhhhhhhhc-ccccccceeeecccCccEEEEecCCc---eEEEecCCCcccccccceehhhHHHHhhccc
Confidence 999885442 223333 89999999999999999999999998 999999976211 111 33579999
Q ss_pred eeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccC
Q 046451 267 VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVG 346 (719)
Q Consensus 267 V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~ 346 (719)
|++++++| +..+|+|||.|.+.+||++.....+.++.+|...|+++.|++.. ++++|+|.|++|+||.+++.++....
T Consensus 466 IN~Vaia~-ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~d-q~laT~SgD~TvKIW~is~fSClkT~ 543 (775)
T KOG0319|consen 466 INCVAIAP-NDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKND-QLLATCSGDKTVKIWSISTFSCLKTF 543 (775)
T ss_pred ccceEecC-CCceEEecccccceeeecccCceEEEEeeCCccceEEEEecccc-ceeEeccCCceEEEEEeccceeeeee
Confidence 99999999 88999999999999999999999999999999999999999998 89999999999999999999998865
Q ss_pred CCCCCCCCccCcceecC-CCceeeeeCCcEEEEccCCCCCccccccccccceeeccCCCCC
Q 046451 347 DSNFSAAPLRAPKWYKR-PAGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGM 406 (719)
Q Consensus 347 ~~~~~~~~~~~p~w~~~-~~~~s~s~~Gklv~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~ 406 (719)
+..-.. +....++.+ ...++.+.||-+..|.-+...+++++..|+..|-+...+++.-
T Consensus 544 eGH~~a--Vlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~ 602 (775)
T KOG0319|consen 544 EGHTSA--VLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLD 602 (775)
T ss_pred cCccce--eEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccc
Confidence 533221 122334444 3568999999999999999999999999999999988887744
No 17
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=8.7e-34 Score=303.74 Aligned_cols=258 Identities=19% Similarity=0.392 Sum_probs=229.1
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccc--c--------C------------CCCCCCCceee
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLI--S--------S------------GETGGNPLIAH 118 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~--~--------~------------~~~~~~~~~~~ 118 (719)
......++|..|+.|+ .+||.|..|..|++|.+.... . . .+.......++
T Consensus 375 ~nt~~~v~ca~fSdds--------smlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~ 446 (707)
T KOG0263|consen 375 HNTYQGVTCAEFSDDS--------SMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRT 446 (707)
T ss_pred EEcCCcceeEeecCCc--------chhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEE
Confidence 3456788999999998 799999999999999987211 0 0 01112244566
Q ss_pred eccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcE
Q 046451 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198 (719)
Q Consensus 119 l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I 198 (719)
+.+|.++|..+.|+| +.++|++|+.|++|++|.+.+......+ .+|...|+++.|+|.| .+|++++.|++-
T Consensus 447 L~GH~GPVyg~sFsP-d~rfLlScSED~svRLWsl~t~s~~V~y-------~GH~~PVwdV~F~P~G-yYFatas~D~tA 517 (707)
T KOG0263|consen 447 LYGHSGPVYGCSFSP-DRRFLLSCSEDSSVRLWSLDTWSCLVIY-------KGHLAPVWDVQFAPRG-YYFATASHDQTA 517 (707)
T ss_pred eecCCCceeeeeecc-cccceeeccCCcceeeeecccceeEEEe-------cCCCcceeeEEecCCc-eEEEecCCCcee
Confidence 899999999999999 8899999999999999999998876553 4688899999999997 899999999999
Q ss_pred EEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCC
Q 046451 199 VVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS 278 (719)
Q Consensus 199 ~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~ 278 (719)
++|.....++.+.|. +|-..+.|+.|+|+. .++++|+.|. +|++||+.++ ..++.|.||.+.|.+++||| +|+
T Consensus 518 rLWs~d~~~PlRifa-ghlsDV~cv~FHPNs-~Y~aTGSsD~---tVRlWDv~~G-~~VRiF~GH~~~V~al~~Sp-~Gr 590 (707)
T KOG0263|consen 518 RLWSTDHNKPLRIFA-GHLSDVDCVSFHPNS-NYVATGSSDR---TVRLWDVSTG-NSVRIFTGHKGPVTALAFSP-CGR 590 (707)
T ss_pred eeeecccCCchhhhc-ccccccceEEECCcc-cccccCCCCc---eEEEEEcCCC-cEEEEecCCCCceEEEEEcC-CCc
Confidence 999999999999888 899999999999997 6899999998 9999999886 66899999999999999999 999
Q ss_pred eEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 279 YLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 279 ~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
+|++|+.||.|.|||+.+++.+..+.+|.+.|+++.|+.|| .+||+|+.|++|++||+..-...
T Consensus 591 ~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg-~vLasgg~DnsV~lWD~~~~~~~ 654 (707)
T KOG0263|consen 591 YLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDG-NVLASGGADNSVRLWDLTKVIEL 654 (707)
T ss_pred eEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCC-CEEEecCCCCeEEEEEchhhccc
Confidence 99999999999999999999999999999999999999999 89999999999999999875443
No 18
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=1.8e-32 Score=262.67 Aligned_cols=290 Identities=22% Similarity=0.345 Sum_probs=248.8
Q ss_pred CccccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCC
Q 046451 1 MACIKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSE 80 (719)
Q Consensus 1 m~~l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~ 80 (719)
|....|.+.|+.+.|+|||.+||+|+.|..| .+|++....+. ... ..+|++.|..+.|..|+
T Consensus 41 m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I----------~LWnv~gdceN-~~~---lkgHsgAVM~l~~~~d~---- 102 (338)
T KOG0265|consen 41 MLLPGHKGEIYTIKFHPDGSCFASGGSDRAI----------VLWNVYGDCEN-FWV---LKGHSGAVMELHGMRDG---- 102 (338)
T ss_pred hhcCCCcceEEEEEECCCCCeEeecCCcceE----------EEEeccccccc-eee---eccccceeEeeeeccCC----
Confidence 4566788999999999999999999988877 67776533322 222 24799999999999998
Q ss_pred CCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCC
Q 046451 81 DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 81 ~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~ 160 (719)
..|++++.|.+|+.||. .++ +.++.+++|.+.|+.+.-+..+..++.+++.|+++++||+++...++
T Consensus 103 ----s~i~S~gtDk~v~~wD~------~tG---~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~ 169 (338)
T KOG0265|consen 103 ----SHILSCGTDKTVRGWDA------ETG---KRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIK 169 (338)
T ss_pred ----CEEEEecCCceEEEEec------ccc---eeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhh
Confidence 79999999999999999 777 89999999999999998766566789999999999999999887776
Q ss_pred ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCC
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED 240 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~ 240 (719)
++. .+..++++.|...+ ..+.+|+-|+.|++||++.+.....+. +|...|+.+..+++|. .+.+-+.|.
T Consensus 170 t~~--------~kyqltAv~f~d~s-~qv~sggIdn~ikvWd~r~~d~~~~ls-Gh~DtIt~lsls~~gs-~llsnsMd~ 238 (338)
T KOG0265|consen 170 TFE--------NKYQLTAVGFKDTS-DQVISGGIDNDIKVWDLRKNDGLYTLS-GHADTITGLSLSRYGS-FLLSNSMDN 238 (338)
T ss_pred ccc--------cceeEEEEEecccc-cceeeccccCceeeeccccCcceEEee-cccCceeeEEeccCCC-ccccccccc
Confidence 641 23479999999886 588999999999999999999999999 9999999999999995 688888887
Q ss_pred CCCcEEEEecCCC---CCceEEeeCCC----CCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEe
Q 046451 241 SSPALRLWDMRNT---MSPVKEFVGHT----KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDI 313 (719)
Q Consensus 241 ~~~~I~lwDl~~~---~~~~~~~~~h~----~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l 313 (719)
++++||++-. ..++..+.+|. .....++|+| +++.+.+|+.|..+++||..+...+..+.+|...|.++
T Consensus 239 ---tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp-~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~ 314 (338)
T KOG0265|consen 239 ---TVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSP-NGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEV 314 (338)
T ss_pred ---eEEEEEecccCCCCceEEEeecchhhhhhhcceeeccC-CCCccccccccceEEEeecccccEEEEcCCcceeEEEe
Confidence 9999999742 24467777764 3456789999 99999999999999999999999999999999999999
Q ss_pred EEcCCCCCEEEEEeCCCcEEEEeC
Q 046451 314 HWYPKIPGVISASSFDGKIGIYNI 337 (719)
Q Consensus 314 ~~spdg~~~las~s~Dg~I~iwd~ 337 (719)
.|+|.. .+|.+++.|++|++=.+
T Consensus 315 ~Fhp~e-~iils~~sdk~i~lgei 337 (338)
T KOG0265|consen 315 DFHPTE-PIILSCSSDKTIYLGEI 337 (338)
T ss_pred eecCCC-cEEEEeccCceeEeecc
Confidence 999998 69999999999987443
No 19
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.1e-32 Score=270.25 Aligned_cols=285 Identities=18% Similarity=0.326 Sum_probs=255.4
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
+...|+.+-|.|+-.++++++.|++| ++||+.+++....+ .+|.+.|.+|+|+..| .
T Consensus 107 ~r~~vt~v~~hp~~~~v~~as~d~ti----------kv~D~~tg~~e~~L-----rGHt~sv~di~~~a~G--------k 163 (406)
T KOG0295|consen 107 HRSSVTRVIFHPSEALVVSASEDATI----------KVFDTETGELERSL-----RGHTDSVFDISFDASG--------K 163 (406)
T ss_pred cccceeeeeeccCceEEEEecCCceE----------EEEEccchhhhhhh-----hccccceeEEEEecCc--------c
Confidence 44678899999999999999877765 99999988775444 6788899999999988 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|++++.|-.+++||.++. . .+++.+.+|...|.+++|-| .+++|++++.|.+|+.||+.++.++.+|
T Consensus 164 ~l~tcSsDl~~~LWd~~~~-----~---~c~ks~~gh~h~vS~V~f~P-~gd~ilS~srD~tik~We~~tg~cv~t~--- 231 (406)
T KOG0295|consen 164 YLATCSSDLSAKLWDFDTF-----F---RCIKSLIGHEHGVSSVFFLP-LGDHILSCSRDNTIKAWECDTGYCVKTF--- 231 (406)
T ss_pred EEEecCCccchhheeHHHH-----H---HHHHHhcCcccceeeEEEEe-cCCeeeecccccceeEEecccceeEEec---
Confidence 9999999999999998531 2 77888999999999999999 6799999999999999999999988774
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCC--------------CCc
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPD--------------VAT 231 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~--------------g~~ 231 (719)
.+|...|..++.+.|| .++++++.|.+|++|-+.++++...+. .|+..|.+++|.|. +..
T Consensus 232 ----~~h~ewvr~v~v~~DG-ti~As~s~dqtl~vW~~~t~~~k~~lR-~hEh~vEci~wap~~~~~~i~~at~~~~~~~ 305 (406)
T KOG0295|consen 232 ----PGHSEWVRMVRVNQDG-TIIASCSNDQTLRVWVVATKQCKAELR-EHEHPVECIAWAPESSYPSISEATGSTNGGQ 305 (406)
T ss_pred ----cCchHhEEEEEecCCe-eEEEecCCCceEEEEEeccchhhhhhh-ccccceEEEEecccccCcchhhccCCCCCcc
Confidence 3577799999999998 699999999999999999998888888 79999999999764 235
Q ss_pred EEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeE
Q 046451 232 QLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNF 311 (719)
Q Consensus 232 ~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~ 311 (719)
++.+++.|+ +|++||+.++ .++.++.+|..+|..++|+| +|+||+++.+|++++|||++++++...+..|...++
T Consensus 306 ~l~s~SrDk---tIk~wdv~tg-~cL~tL~ghdnwVr~~af~p-~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt 380 (406)
T KOG0295|consen 306 VLGSGSRDK---TIKIWDVSTG-MCLFTLVGHDNWVRGVAFSP-GGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVT 380 (406)
T ss_pred EEEeecccc---eEEEEeccCC-eEEEEEecccceeeeeEEcC-CCeEEEEEecCCcEEEEEeccceeeeccCCCcceeE
Confidence 788888888 9999999886 88999999999999999999 999999999999999999999999999999999999
Q ss_pred EeEEcCCCCCEEEEEeCCCcEEEEeC
Q 046451 312 DIHWYPKIPGVISASSFDGKIGIYNI 337 (719)
Q Consensus 312 ~l~~spdg~~~las~s~Dg~I~iwd~ 337 (719)
++.|+.+. -+++||+-|.++++|..
T Consensus 381 ~lDfh~~~-p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 381 SLDFHKTA-PYVVTGSVDQTVKVWEC 405 (406)
T ss_pred EEecCCCC-ceEEeccccceeeeeec
Confidence 99999998 59999999999999974
No 20
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=2.8e-33 Score=277.91 Aligned_cols=292 Identities=18% Similarity=0.306 Sum_probs=242.3
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
...+..|+.|.|.|+| +.|++|+..|.+.||+.. .. .....+..|...|+++.|+. ++.+++
T Consensus 93 NKvkc~V~~v~WtPeG--------RRLltgs~SGEFtLWNg~------~f---nFEtilQaHDs~Vr~m~ws~-~g~wmi 154 (464)
T KOG0284|consen 93 NKVKCPVNVVRWTPEG--------RRLLTGSQSGEFTLWNGT------SF---NFETILQAHDSPVRTMKWSH-NGTWMI 154 (464)
T ss_pred cccccceeeEEEcCCC--------ceeEeecccccEEEecCc------ee---eHHHHhhhhcccceeEEEcc-CCCEEE
Confidence 3456689999999999 899999999999999972 22 44456778999999999999 899999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
+|+.+|.|++|+.+..... . ....|...|++++|++++ ..|+++++||+|+|||....+....+. +|.-.|
T Consensus 155 SgD~gG~iKyWqpnmnnVk-~------~~ahh~eaIRdlafSpnD-skF~t~SdDg~ikiWdf~~~kee~vL~-GHgwdV 225 (464)
T KOG0284|consen 155 SGDKGGMIKYWQPNMNNVK-I------IQAHHAEAIRDLAFSPND-SKFLTCSDDGTIKIWDFRMPKEERVLR-GHGWDV 225 (464)
T ss_pred EcCCCceEEecccchhhhH-H------hhHhhhhhhheeccCCCC-ceeEEecCCCeEEEEeccCCchhheec-cCCCCc
Confidence 9999999999998755432 1 123455799999999986 589999999999999999988888887 899999
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEE
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV 300 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~ 300 (719)
.+++|+|.. .++++++.|. .|++||.+++ .++.++.+|+..|..+.|++ ++++|+++|.|..+++||+++.+.+
T Consensus 226 ksvdWHP~k-gLiasgskDn---lVKlWDprSg-~cl~tlh~HKntVl~~~f~~-n~N~Llt~skD~~~kv~DiR~mkEl 299 (464)
T KOG0284|consen 226 KSVDWHPTK-GLIASGSKDN---LVKLWDPRSG-SCLATLHGHKNTVLAVKFNP-NGNWLLTGSKDQSCKVFDIRTMKEL 299 (464)
T ss_pred ceeccCCcc-ceeEEccCCc---eeEeecCCCc-chhhhhhhccceEEEEEEcC-CCCeeEEccCCceEEEEehhHhHHH
Confidence 999999996 5899999998 9999999986 78899999999999999999 8899999999999999999999999
Q ss_pred EEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEcc
Q 046451 301 SELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHP 380 (719)
Q Consensus 301 ~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~ 380 (719)
.++++|...|+++.|+|-.+.+|++|+.||.|..|.+...+.+...+... +..+...+|.+-...++-+...+-+.|+.
T Consensus 300 ~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AH-d~~iwsl~~hPlGhil~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 300 FTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAH-DGEIWSLAYHPLGHILATGSNDRTVRFWT 378 (464)
T ss_pred HHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCccc-ccceeeeeccccceeEeecCCCcceeeec
Confidence 99999999999999999988999999999999999999655554333221 22234555655554455555555555555
Q ss_pred CCCCCc
Q 046451 381 KSSAGH 386 (719)
Q Consensus 381 ~~~~~~ 386 (719)
...-++
T Consensus 379 r~rp~d 384 (464)
T KOG0284|consen 379 RNRPGD 384 (464)
T ss_pred cCCCCC
Confidence 554444
No 21
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=9.4e-32 Score=284.84 Aligned_cols=329 Identities=19% Similarity=0.357 Sum_probs=263.3
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceE
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLV 87 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~l 87 (719)
..|++.+|++.-++||+|-.+|.+ .+|++..-...+.+ .-....|..++|+..| ++|
T Consensus 266 ~kvtaa~fH~~t~~lvvgFssG~f----------~LyelP~f~lih~L-----Sis~~~I~t~~~N~tG--------DWi 322 (893)
T KOG0291|consen 266 SKVTAAAFHKGTNLLVVGFSSGEF----------GLYELPDFNLIHSL-----SISDQKILTVSFNSTG--------DWI 322 (893)
T ss_pred cceeeeeccCCceEEEEEecCCee----------EEEecCCceEEEEe-----ecccceeeEEEecccC--------CEE
Confidence 679999999999999999877766 66776532222221 1134789999999998 688
Q ss_pred EEEcCC-CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCcc
Q 046451 88 AGGLVD-GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166 (719)
Q Consensus 88 asgs~d-g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~ 166 (719)
|.|+.. |.+.||+. ... ..+...++|...+.+++++| |++++++|+.||+|+|||...+-+..+|
T Consensus 323 A~g~~klgQLlVweW------qsE---sYVlKQQgH~~~i~~l~YSp-Dgq~iaTG~eDgKVKvWn~~SgfC~vTF---- 388 (893)
T KOG0291|consen 323 AFGCSKLGQLLVWEW------QSE---SYVLKQQGHSDRITSLAYSP-DGQLIATGAEDGKVKVWNTQSGFCFVTF---- 388 (893)
T ss_pred EEcCCccceEEEEEe------ecc---ceeeeccccccceeeEEECC-CCcEEEeccCCCcEEEEeccCceEEEEe----
Confidence 888765 89999999 444 67778889999999999999 8999999999999999999998887664
Q ss_pred CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEE
Q 046451 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALR 246 (719)
Q Consensus 167 ~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~ 246 (719)
..|.+.|+.+.|+..| +.+++.+-||+|+.||+...+..++|.........|++..+.|. +++.|+.|.- .|+
T Consensus 389 ---teHts~Vt~v~f~~~g-~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGe-lV~AG~~d~F--~If 461 (893)
T KOG0291|consen 389 ---TEHTSGVTAVQFTARG-NVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGE-LVCAGAQDSF--EIF 461 (893)
T ss_pred ---ccCCCceEEEEEEecC-CEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCC-EEEeeccceE--EEE
Confidence 4588899999999997 69999999999999999999999999977778889999999984 6666666653 799
Q ss_pred EEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe-EEEEecCCCCCeEEeEEcCCCCCEEEE
Q 046451 247 LWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE-IVSELPAGTNWNFDIHWYPKIPGVISA 325 (719)
Q Consensus 247 lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~-~~~~l~~h~~~v~~l~~spdg~~~las 325 (719)
+|+++++ +.+..+.||.++|.+++|++ ++..|+++++|.+|++||+-... .+.++. +...+..++|+||| .-|++
T Consensus 462 vWS~qTG-qllDiLsGHEgPVs~l~f~~-~~~~LaS~SWDkTVRiW~if~s~~~vEtl~-i~sdvl~vsfrPdG-~elaV 537 (893)
T KOG0291|consen 462 VWSVQTG-QLLDILSGHEGPVSGLSFSP-DGSLLASGSWDKTVRIWDIFSSSGTVETLE-IRSDVLAVSFRPDG-KELAV 537 (893)
T ss_pred EEEeecC-eeeehhcCCCCcceeeEEcc-ccCeEEeccccceEEEEEeeccCceeeeEe-eccceeEEEEcCCC-CeEEE
Confidence 9999986 77889999999999999999 99999999999999999987543 344443 44569999999999 78888
Q ss_pred EeCCCcEEEEeCCCCccccc--CCCCCCCCCc-----cCc--ceecCCCceeeeeCCcEEEEccCCCC
Q 046451 326 SSFDGKIGIYNIEGCSRYGV--GDSNFSAAPL-----RAP--KWYKRPAGASFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 326 ~s~Dg~I~iwd~~~~~~~~~--~~~~~~~~~~-----~~p--~w~~~~~~~s~s~~Gklv~~~~~~~~ 384 (719)
++.||.|.+||++.+..... +......+.. .+- .--+.-+.+++++||+.+.-+.....
T Consensus 538 aTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~ 605 (893)
T KOG0291|consen 538 ATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNS 605 (893)
T ss_pred EEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCccc
Confidence 99999999999998877652 2222222211 111 01112356899999998776655443
No 22
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=3.1e-31 Score=280.92 Aligned_cols=358 Identities=16% Similarity=0.261 Sum_probs=278.9
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCc--cccee-ecccCCCCCceeeeecCCCCCCCC
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSED--RDLLL-VGESPSSERFNRLAWGKNGSGSED 81 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~--~~~~~-~~~~~~~~~V~~l~~sp~g~~~~~ 81 (719)
+-...|.|+.|||||+++|+|. .+.++||..-..... ..+.+ ....+|...|.+|.|+.|.
T Consensus 94 ~fk~~v~~i~fSPng~~fav~~-----------gn~lqiw~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DS----- 157 (893)
T KOG0291|consen 94 NFKRGVGAIKFSPNGKFFAVGC-----------GNLLQIWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDDS----- 157 (893)
T ss_pred eecCccceEEECCCCcEEEEEe-----------cceeEEEecCcchhcccCcceEeeeecCCccceeEEEeccCC-----
Confidence 4457899999999999999983 456789987643331 12222 4456789999999999998
Q ss_pred CccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCC-----
Q 046451 82 FSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAP----- 156 (719)
Q Consensus 82 ~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~----- 156 (719)
++|++|+.|-+++||+++.. ++ -....+.+|++.|..+-|.. +...|++.+.||.|.+|.....
T Consensus 158 ---r~l~~gsrD~s~rl~~v~~~----k~---~~~~~l~gHkd~VvacfF~~-~~~~l~tvskdG~l~~W~~~~~P~~~~ 226 (893)
T KOG0291|consen 158 ---RLLVTGSRDLSARLFGVDGN----KN---LFTYALNGHKDYVVACFFGA-NSLDLYTVSKDGALFVWTCDLRPPELD 226 (893)
T ss_pred ---ceEEeccccceEEEEEeccc----cc---cceEeccCCCcceEEEEecc-CcceEEEEecCceEEEEEecCCCcccc
Confidence 89999999999999998542 22 45678899999999999988 7788999999999999987611
Q ss_pred -------------------CCCCcc--CCc-cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC
Q 046451 157 -------------------AEPSHF--PPL-RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE 214 (719)
Q Consensus 157 -------------------~~~~~~--~~l-~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~ 214 (719)
+....+ ... +.........|++.+|++.- ++|+++-.+|...+|++.....++.+.
T Consensus 227 ~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t-~~lvvgFssG~f~LyelP~f~lih~LS- 304 (893)
T KOG0291|consen 227 KAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGT-NLLVVGFSSGEFGLYELPDFNLIHSLS- 304 (893)
T ss_pred cccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCc-eEEEEEecCCeeEEEecCCceEEEEee-
Confidence 100000 000 00111122578999999874 799999999999999999999999998
Q ss_pred CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEEC
Q 046451 215 SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDT 294 (719)
Q Consensus 215 ~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~ 294 (719)
-....|..++|+..|+ .++.++..- |.+.||+.+.. .-+....+|...+++++++| ||.++++|++||+|+|||.
T Consensus 305 is~~~I~t~~~N~tGD-WiA~g~~kl--gQLlVweWqsE-sYVlKQQgH~~~i~~l~YSp-Dgq~iaTG~eDgKVKvWn~ 379 (893)
T KOG0291|consen 305 ISDQKILTVSFNSTGD-WIAFGCSKL--GQLLVWEWQSE-SYVLKQQGHSDRITSLAYSP-DGQLIATGAEDGKVKVWNT 379 (893)
T ss_pred cccceeeEEEecccCC-EEEEcCCcc--ceEEEEEeecc-ceeeeccccccceeeEEECC-CCcEEEeccCCCcEEEEec
Confidence 5678999999999996 555555542 38999999864 55677889999999999999 9999999999999999999
Q ss_pred CCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCc
Q 046451 295 VSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGK 374 (719)
Q Consensus 295 ~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gk 374 (719)
.+|-++.+|..|++.|+.+.|+..| +.+++.+.||+|+.||+...+........ .+.-+ ..++..+.|.
T Consensus 380 ~SgfC~vTFteHts~Vt~v~f~~~g-~~llssSLDGtVRAwDlkRYrNfRTft~P-------~p~Qf---scvavD~sGe 448 (893)
T KOG0291|consen 380 QSGFCFVTFTEHTSGVTAVQFTARG-NVLLSSSLDGTVRAWDLKRYRNFRTFTSP-------EPIQF---SCVAVDPSGE 448 (893)
T ss_pred cCceEEEEeccCCCceEEEEEEecC-CEEEEeecCCeEEeeeecccceeeeecCC-------Cceee---eEEEEcCCCC
Confidence 9999999999999999999999999 89999999999999999998876522111 11000 0112222244
Q ss_pred E-----------EEEccCCCCCccccccccccceeeccCCCCCC
Q 046451 375 L-----------VSFHPKSSAGHTSENSQHAPVHGVDQSKYGMV 407 (719)
Q Consensus 375 l-----------v~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~ 407 (719)
+ ..|+-..+.++-.++||.++|.+..+++++..
T Consensus 449 lV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~ 492 (893)
T KOG0291|consen 449 LVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSL 492 (893)
T ss_pred EEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCe
Confidence 4 45666666666678999999999999999887
No 23
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=1.4e-31 Score=294.79 Aligned_cols=288 Identities=26% Similarity=0.427 Sum_probs=242.6
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
+...|.++.||+||++|++++.++.+ ++|+...... .. .....+|...|++++|++++ .
T Consensus 158 ~~~sv~~~~fs~~g~~l~~~~~~~~i----------~~~~~~~~~~-~~--~~~l~~h~~~v~~~~fs~d~--------~ 216 (456)
T KOG0266|consen 158 ECPSVTCVDFSPDGRALAAASSDGLI----------RIWKLEGIKS-NL--LRELSGHTRGVSDVAFSPDG--------S 216 (456)
T ss_pred ccCceEEEEEcCCCCeEEEccCCCcE----------EEeecccccc-hh--hccccccccceeeeEECCCC--------c
Confidence 35778999999999999999887766 7888854442 11 12226799999999999998 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|++++.|++|+|||+. ..+ ..++++.+|...|++++|++ +++++++|+.|++|+|||+++++....
T Consensus 217 ~l~s~s~D~tiriwd~~-----~~~---~~~~~l~gH~~~v~~~~f~p-~g~~i~Sgs~D~tvriWd~~~~~~~~~---- 283 (456)
T KOG0266|consen 217 YLLSGSDDKTLRIWDLK-----DDG---RNLKTLKGHSTYVTSVAFSP-DGNLLVSGSDDGTVRIWDVRTGECVRK---- 283 (456)
T ss_pred EEEEecCCceEEEeecc-----CCC---eEEEEecCCCCceEEEEecC-CCCEEEEecCCCcEEEEeccCCeEEEe----
Confidence 99999999999999993 333 77899999999999999999 569999999999999999999776554
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc--eeEEecCCCCC-ceeEEEECCCCCcEEEEEeCCCCC
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK--PVISFSESIKR-RCSVLQWNPDVATQLVVASDEDSS 242 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~~~~~-~i~~l~~sp~g~~~l~~~s~d~~~ 242 (719)
...|.+.|++++|++++ ++|++++.|+.|+|||+.++. ++..+...... .++++.|++++ .+++++..|+
T Consensus 284 ---l~~hs~~is~~~f~~d~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~-~~ll~~~~d~-- 356 (456)
T KOG0266|consen 284 ---LKGHSDGISGLAFSPDG-NLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNG-KYLLSASLDR-- 356 (456)
T ss_pred ---eeccCCceEEEEECCCC-CEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCC-cEEEEecCCC--
Confidence 35688899999999997 689999999999999999998 45666532233 59999999998 4788888887
Q ss_pred CcEEEEecCCCCCceEEeeCCCCCe---eEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCC-CCCeEEeEEcCC
Q 046451 243 PALRLWDMRNTMSPVKEFVGHTKGV---IAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAG-TNWNFDIHWYPK 318 (719)
Q Consensus 243 ~~I~lwDl~~~~~~~~~~~~h~~~V---~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h-~~~v~~l~~spd 318 (719)
.+++||++.. ..+..+.+|...+ .+..+++ ++.++++|+.|+.|++||+.++..+..+.+| ...+..+.|++.
T Consensus 357 -~~~~w~l~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~ 433 (456)
T KOG0266|consen 357 -TLKLWDLRSG-KSVGTYTGHSNLVRCIFSPTLST-GGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPT 433 (456)
T ss_pred -eEEEEEccCC-cceeeecccCCcceeEecccccC-CCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCC
Confidence 8999999875 6677888887753 3444456 8899999999999999999999999999999 888999999999
Q ss_pred CCCEEEEEe--CCCcEEEEeCC
Q 046451 319 IPGVISASS--FDGKIGIYNIE 338 (719)
Q Consensus 319 g~~~las~s--~Dg~I~iwd~~ 338 (719)
. .++++++ .|+.|++|..+
T Consensus 434 ~-~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 434 E-NLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred c-CeeeecCcCCCceEEEecCC
Confidence 8 7898888 68999999865
No 24
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=3.5e-32 Score=265.61 Aligned_cols=285 Identities=19% Similarity=0.291 Sum_probs=247.2
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.|.+.|.|+++.|-..+|++|+.|+++ +|||+.++.... ...+|...|..+++|+..
T Consensus 149 gHlgWVr~vavdP~n~wf~tgs~Drti----------kIwDlatg~Lkl-----tltGhi~~vr~vavS~rH-------- 205 (460)
T KOG0285|consen 149 GHLGWVRSVAVDPGNEWFATGSADRTI----------KIWDLATGQLKL-----TLTGHIETVRGVAVSKRH-------- 205 (460)
T ss_pred hccceEEEEeeCCCceeEEecCCCcee----------EEEEcccCeEEE-----eecchhheeeeeeecccC--------
Confidence 477999999999999999999888776 999999775433 235688999999999876
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
-+|++++.|+.|+.||+ ... +.++.+.+|-..|.|++.+| .-+.|++|+.|.+++|||+++...+..
T Consensus 206 pYlFs~gedk~VKCwDL------e~n---kvIR~YhGHlS~V~~L~lhP-Tldvl~t~grDst~RvWDiRtr~~V~~--- 272 (460)
T KOG0285|consen 206 PYLFSAGEDKQVKCWDL------EYN---KVIRHYHGHLSGVYCLDLHP-TLDVLVTGGRDSTIRVWDIRTRASVHV--- 272 (460)
T ss_pred ceEEEecCCCeeEEEec------hhh---hhHHHhccccceeEEEeccc-cceeEEecCCcceEEEeeecccceEEE---
Confidence 69999999999999999 445 88899999999999999999 678999999999999999999877655
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
+ .+|...|..+.+.+.+. .+++|+.|++|++||++.++...++. .|...+.+++.+|.. +.|++++.|+
T Consensus 273 l----~GH~~~V~~V~~~~~dp-qvit~S~D~tvrlWDl~agkt~~tlt-~hkksvral~lhP~e-~~fASas~dn---- 341 (460)
T KOG0285|consen 273 L----SGHTNPVASVMCQPTDP-QVITGSHDSTVRLWDLRAGKTMITLT-HHKKSVRALCLHPKE-NLFASASPDN---- 341 (460)
T ss_pred e----cCCCCcceeEEeecCCC-ceEEecCCceEEEeeeccCceeEeee-cccceeeEEecCCch-hhhhccCCcc----
Confidence 2 46888999999988764 79999999999999999999999988 899999999999996 6788888885
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec--------CCCCCeEEeEEc
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP--------AGTNWNFDIHWY 316 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~--------~h~~~v~~l~~s 316 (719)
|+.|++-.+ ..+..+.+|..-|++++.+. ..++++|+++|.+.+||.++|...+.+. ..+..|++.+|.
T Consensus 342 ik~w~~p~g-~f~~nlsgh~~iintl~~ns--D~v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fD 418 (460)
T KOG0285|consen 342 IKQWKLPEG-EFLQNLSGHNAIINTLSVNS--DGVLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFD 418 (460)
T ss_pred ceeccCCcc-chhhccccccceeeeeeecc--CceEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeec
Confidence 999999876 55666999999999999886 4688999999999999999987655542 134569999999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCC
Q 046451 317 PKIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 317 pdg~~~las~s~Dg~I~iwd~~~~ 340 (719)
..| ..|++|..|.+|++|.-...
T Consensus 419 ktg-~rlit~eadKtIk~~keDe~ 441 (460)
T KOG0285|consen 419 KTG-SRLITGEADKTIKMYKEDEH 441 (460)
T ss_pred ccC-ceEEeccCCcceEEEecccc
Confidence 998 79999999999999986543
No 25
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=2e-30 Score=265.06 Aligned_cols=366 Identities=16% Similarity=0.226 Sum_probs=271.7
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCce--EE-------------EEEee---------------------c
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSAN--LE-------------IFKLD---------------------F 48 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~--i~-------------iwd~~---------------------~ 48 (719)
.|...++-..|||.|.|+|+|+..|.||||...... ++ -||.+ .
T Consensus 57 EH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DS 136 (603)
T KOG0318|consen 57 EHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDS 136 (603)
T ss_pred cccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEecC
Confidence 455677888999999999999999999887544311 10 12211 1
Q ss_pred cCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEE
Q 046451 49 QSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRG 128 (719)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~ 128 (719)
+.... ...+|...|++++|-+... -++++|++|++|.+|+= . -.+...++..|..-|.|
T Consensus 137 G~SvG-----ei~GhSr~ins~~~KpsRP-------fRi~T~sdDn~v~ffeG------P---PFKFk~s~r~HskFV~~ 195 (603)
T KOG0318|consen 137 GNSVG-----EITGHSRRINSVDFKPSRP-------FRIATGSDDNTVAFFEG------P---PFKFKSSFREHSKFVNC 195 (603)
T ss_pred CCccc-----eeeccceeEeeeeccCCCc-------eEEEeccCCCeEEEeeC------C---Ceeeeecccccccceee
Confidence 11111 1236777888888877654 68999999999999984 1 22666778889999999
Q ss_pred EEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce
Q 046451 129 LEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP 208 (719)
Q Consensus 129 l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~ 208 (719)
+.|+| |+.+|++++.||+|.|||-.+++.+..+ .. ...|++.|.+|+|+||+ ..|++++.|.+++|||+.+.++
T Consensus 196 VRysP-DG~~Fat~gsDgki~iyDGktge~vg~l---~~-~~aHkGsIfalsWsPDs-~~~~T~SaDkt~KIWdVs~~sl 269 (603)
T KOG0318|consen 196 VRYSP-DGSRFATAGSDGKIYIYDGKTGEKVGEL---ED-SDAHKGSIFALSWSPDS-TQFLTVSADKTIKIWDVSTNSL 269 (603)
T ss_pred EEECC-CCCeEEEecCCccEEEEcCCCccEEEEe---cC-CCCccccEEEEEECCCC-ceEEEecCCceEEEEEeeccce
Confidence 99999 7999999999999999999999887764 22 46799999999999997 6899999999999999999999
Q ss_pred eEEecCCCC--CceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCC
Q 046451 209 VISFSESIK--RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD 286 (719)
Q Consensus 209 ~~~~~~~~~--~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~D 286 (719)
+.++..... .....+.|-.+ .|++.+.+| +|.+++..... +++.+.+|...|+++..++ |+++|++|+.|
T Consensus 270 v~t~~~~~~v~dqqvG~lWqkd---~lItVSl~G---~in~ln~~d~~-~~~~i~GHnK~ITaLtv~~-d~~~i~SgsyD 341 (603)
T KOG0318|consen 270 VSTWPMGSTVEDQQVGCLWQKD---HLITVSLSG---TINYLNPSDPS-VLKVISGHNKSITALTVSP-DGKTIYSGSYD 341 (603)
T ss_pred EEEeecCCchhceEEEEEEeCC---eEEEEEcCc---EEEEecccCCC-hhheecccccceeEEEEcC-CCCEEEeeccC
Confidence 998875333 34455667743 577888887 89999998764 8899999999999999999 88999999999
Q ss_pred CcEEEEECCCCeEEEEe-cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCc----------
Q 046451 287 NRTICWDTVSGEIVSEL-PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPL---------- 355 (719)
Q Consensus 287 g~I~iwd~~~~~~~~~l-~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~---------- 355 (719)
|.|.-||..+|..-... +.|.+.|.+++-+..+ .|+++++|.+|++.++............++....
T Consensus 342 G~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~--~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~ 419 (603)
T KOG0318|consen 342 GHINSWDSGSGTSDRLAGKGHTNQIKGMAASESG--ELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGT 419 (603)
T ss_pred ceEEEEecCCccccccccccccceEEEEeecCCC--cEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCE
Confidence 99999999988765443 6799999999988765 6888899999999988654332211111111000
Q ss_pred ------------------cCcceecCCCceeeeeCCcEEEEccCCC----------CCccc--cccccccceeeccCCCC
Q 046451 356 ------------------RAPKWYKRPAGASFGFGGKLVSFHPKSS----------AGHTS--ENSQHAPVHGVDQSKYG 405 (719)
Q Consensus 356 ------------------~~p~w~~~~~~~s~s~~Gklv~~~~~~~----------~~~~~--~~~~~~~v~~v~~s~~~ 405 (719)
....--..+.+++++.+|..++++..++ +++.. +.-|++.+..|++|||+
T Consensus 420 avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~ 499 (603)
T KOG0318|consen 420 AVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDG 499 (603)
T ss_pred EEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCC
Confidence 0000111123455555555555444433 32211 46799999999999998
Q ss_pred CC
Q 046451 406 MV 407 (719)
Q Consensus 406 ~~ 407 (719)
.=
T Consensus 500 ~y 501 (603)
T KOG0318|consen 500 AY 501 (603)
T ss_pred cE
Confidence 75
No 26
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=3.7e-32 Score=291.25 Aligned_cols=257 Identities=19% Similarity=0.331 Sum_probs=217.0
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCce---------EEEEE-------eeccCCcccceeecccCCCCCceee
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSAN---------LEIFK-------LDFQSEDRDLLLVGESPSSERFNRL 70 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~---------i~iwd-------~~~~~~~~~~~~~~~~~~~~~V~~l 70 (719)
...++|+.||.|+++||.|..|..|++|-..... +.--| .+..............+|.+.|..+
T Consensus 378 ~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~ 457 (707)
T KOG0263|consen 378 YQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGC 457 (707)
T ss_pred CCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeee
Confidence 4678999999999999999888877665433211 10000 0000111111223357899999999
Q ss_pred eecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEE
Q 046451 71 AWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICI 150 (719)
Q Consensus 71 ~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~i 150 (719)
.|+|+. ++|+++++|++|++|.+ .+. ..+..+++|..+|+++.|+| .|.+|||++.|++-++
T Consensus 458 sFsPd~--------rfLlScSED~svRLWsl------~t~---s~~V~y~GH~~PVwdV~F~P-~GyYFatas~D~tArL 519 (707)
T KOG0263|consen 458 SFSPDR--------RFLLSCSEDSSVRLWSL------DTW---SCLVIYKGHLAPVWDVQFAP-RGYYFATASHDQTARL 519 (707)
T ss_pred eecccc--------cceeeccCCcceeeeec------ccc---eeEEEecCCCcceeeEEecC-CceEEEecCCCceeee
Confidence 999998 89999999999999999 445 78888899999999999999 7899999999999999
Q ss_pred EcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCC
Q 046451 151 WDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVA 230 (719)
Q Consensus 151 wdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~ 230 (719)
|........+.| .+|-+.|.|+.|+|+. +++++|+.|.+|++||+.+|..++.|. +|.+.|.+++|+|+|
T Consensus 520 Ws~d~~~PlRif-------aghlsDV~cv~FHPNs-~Y~aTGSsD~tVRlWDv~~G~~VRiF~-GH~~~V~al~~Sp~G- 589 (707)
T KOG0263|consen 520 WSTDHNKPLRIF-------AGHLSDVDCVSFHPNS-NYVATGSSDRTVRLWDVSTGNSVRIFT-GHKGPVTALAFSPCG- 589 (707)
T ss_pred eecccCCchhhh-------cccccccceEEECCcc-cccccCCCCceEEEEEcCCCcEEEEec-CCCCceEEEEEcCCC-
Confidence 999887666553 4588899999999995 799999999999999999999999998 899999999999998
Q ss_pred cEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC
Q 046451 231 TQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 231 ~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~ 296 (719)
.+|++|+.|+ .|.+||+.++ +.+..+.+|++.|.++.|+. +|..|++|+.|++|++||+..
T Consensus 590 r~LaSg~ed~---~I~iWDl~~~-~~v~~l~~Ht~ti~SlsFS~-dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 590 RYLASGDEDG---LIKIWDLANG-SLVKQLKGHTGTIYSLSFSR-DGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred ceEeecccCC---cEEEEEcCCC-cchhhhhcccCceeEEEEec-CCCEEEecCCCCeEEEEEchh
Confidence 5899999998 9999999875 77888999999999999999 999999999999999999864
No 27
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=6.9e-32 Score=267.96 Aligned_cols=289 Identities=15% Similarity=0.283 Sum_probs=234.8
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCccccee-ecccCCCCCceeeeecCCCCCCCCCc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLL-VGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~-~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
.|.+.|+-+.||++|+|||+++.|.+. -||++..... +++ ....+|...|..+.||||.
T Consensus 222 ~htdEVWfl~FS~nGkyLAsaSkD~Ta----------iiw~v~~d~~---~kl~~tlvgh~~~V~yi~wSPDd------- 281 (519)
T KOG0293|consen 222 DHTDEVWFLQFSHNGKYLASASKDSTA----------IIWIVVYDVH---FKLKKTLVGHSQPVSYIMWSPDD------- 281 (519)
T ss_pred hCCCcEEEEEEcCCCeeEeeccCCceE----------EEEEEecCcc---eeeeeeeecccCceEEEEECCCC-------
Confidence 477899999999999999999877655 6788775443 222 4456899999999999998
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec-cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCcc
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS-RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF 162 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~ 162 (719)
++|++|+.|..+.+||+. ++ .....+. +|...+.+++|.| |+..+++|+.|+.|..||++.... ..
T Consensus 282 -ryLlaCg~~e~~~lwDv~------tg---d~~~~y~~~~~~S~~sc~W~p-Dg~~~V~Gs~dr~i~~wdlDgn~~-~~- 348 (519)
T KOG0293|consen 282 -RYLLACGFDEVLSLWDVD------TG---DLRHLYPSGLGFSVSSCAWCP-DGFRFVTGSPDRTIIMWDLDGNIL-GN- 348 (519)
T ss_pred -CeEEecCchHheeeccCC------cc---hhhhhcccCcCCCcceeEEcc-CCceeEecCCCCcEEEecCCcchh-hc-
Confidence 799999999999999994 44 3333332 2457899999999 889999999999999999986542 11
Q ss_pred CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCC
Q 046451 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSS 242 (719)
Q Consensus 163 ~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~ 242 (719)
.++. ....|.+++..+||. .+++.+.|..|++++.++...+..+. ....|++++.+.|++ ++++.-.+.
T Consensus 349 --W~gv---r~~~v~dlait~Dgk-~vl~v~~d~~i~l~~~e~~~dr~lis--e~~~its~~iS~d~k-~~LvnL~~q-- 417 (519)
T KOG0293|consen 349 --WEGV---RDPKVHDLAITYDGK-YVLLVTVDKKIRLYNREARVDRGLIS--EEQPITSFSISKDGK-LALVNLQDQ-- 417 (519)
T ss_pred --cccc---ccceeEEEEEcCCCc-EEEEEecccceeeechhhhhhhcccc--ccCceeEEEEcCCCc-EEEEEcccC--
Confidence 2222 124799999999985 77777899999999998876665554 678899999999995 455555554
Q ss_pred CcEEEEecCCCCCceEEeeCCCCC--eeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCC
Q 046451 243 PALRLWDMRNTMSPVKEFVGHTKG--VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIP 320 (719)
Q Consensus 243 ~~I~lwDl~~~~~~~~~~~~h~~~--V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~ 320 (719)
.|++||++. ...++.+.||... |..-||--.+..++++|++|+.|+||+..+|+.+.++.+|...|++++|+|..+
T Consensus 418 -ei~LWDl~e-~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p 495 (519)
T KOG0293|consen 418 -EIHLWDLEE-NKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADP 495 (519)
T ss_pred -eeEEeecch-hhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCH
Confidence 699999984 5777888888753 555567654568999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCcEEEEeCCC
Q 046451 321 GVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 321 ~~las~s~Dg~I~iwd~~~ 339 (719)
..+|++|+||+|+||....
T Consensus 496 ~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 496 EMFASASDDGTIRIWGPSD 514 (519)
T ss_pred HHhhccCCCCeEEEecCCc
Confidence 9999999999999998764
No 28
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=1.1e-30 Score=268.86 Aligned_cols=283 Identities=24% Similarity=0.436 Sum_probs=239.7
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.|.+.|.+++|++++++|++++.+|.| ++|++...... .....|...+.++.|++++
T Consensus 7 ~h~~~i~~~~~~~~~~~l~~~~~~g~i----------~i~~~~~~~~~-----~~~~~~~~~i~~~~~~~~~-------- 63 (289)
T cd00200 7 GHTGGVTCVAFSPDGKLLATGSGDGTI----------KVWDLETGELL-----RTLKGHTGPVRDVAASADG-------- 63 (289)
T ss_pred ccCCCEEEEEEcCCCCEEEEeecCcEE----------EEEEeeCCCcE-----EEEecCCcceeEEEECCCC--------
Confidence 366899999999999999999877766 88998855422 2224577888999999987
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
++|++++.||.|++||+ .++ +.+..+..|...|.++.|++ +++++++++.|+.|++||+.+.+....+
T Consensus 64 ~~l~~~~~~~~i~i~~~------~~~---~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~-- 131 (289)
T cd00200 64 TYLASGSSDKTIRLWDL------ETG---ECVRTLTGHTSYVSSVAFSP-DGRILSSSSRDKTIKVWDVETGKCLTTL-- 131 (289)
T ss_pred CEEEEEcCCCeEEEEEc------Ccc---cceEEEeccCCcEEEEEEcC-CCCEEEEecCCCeEEEEECCCcEEEEEe--
Confidence 69999999999999999 334 56777788999999999999 6788888888999999999876654432
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
..|...|.+++|++++ .++++++.|+.|++||+++++.+..+. .+...+.++.|++++. .+++++.++ .
T Consensus 132 -----~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~l~~~~~~~---~ 200 (289)
T cd00200 132 -----RGHTDWVNSVAFSPDG-TFVASSSQDGTIKLWDLRTGKCVATLT-GHTGEVNSVAFSPDGE-KLLSSSSDG---T 200 (289)
T ss_pred -----ccCCCcEEEEEEcCcC-CEEEEEcCCCcEEEEEccccccceeEe-cCccccceEEECCCcC-EEEEecCCC---c
Confidence 2466789999999985 578887779999999999888888887 6788999999999984 566666676 8
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEE
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~la 324 (719)
|++||++.. ..+..+..|...+.+++|++ ++.++++++.||.|++||+.+++.+..+..|...|.+++|++++ .+|+
T Consensus 201 i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~ 277 (289)
T cd00200 201 IKLWDLSTG-KCLGTLRGHENGVNSVAFSP-DGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDG-KRLA 277 (289)
T ss_pred EEEEECCCC-ceecchhhcCCceEEEEEcC-CCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCC-CEEE
Confidence 999999864 55677778888999999999 78888888889999999999999999999999999999999998 7999
Q ss_pred EEeCCCcEEEEe
Q 046451 325 ASSFDGKIGIYN 336 (719)
Q Consensus 325 s~s~Dg~I~iwd 336 (719)
+++.||.|++|+
T Consensus 278 ~~~~d~~i~iw~ 289 (289)
T cd00200 278 SGSADGTIRIWD 289 (289)
T ss_pred EecCCCeEEecC
Confidence 999999999996
No 29
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=6.6e-31 Score=310.56 Aligned_cols=290 Identities=22% Similarity=0.429 Sum_probs=232.6
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcc-cc-eeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDR-DL-LLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~-~~-~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
|.+.|.+++|++||++||+|+.||.| +||++....... .. .......+...|.+++|++...
T Consensus 482 ~~~~V~~i~fs~dg~~latgg~D~~I----------~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~------ 545 (793)
T PLN00181 482 SSNLVCAIGFDRDGEFFATAGVNKKI----------KIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIK------ 545 (793)
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCEE----------EEEECCcccccccccccceEEecccCceeeEEeccCCC------
Confidence 56789999999999999999988877 778765321110 00 0011223456899999988632
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
.+|++++.||.|+|||+ .++ ..+..+.+|.+.|++++|++.++.+|++|+.||+|++||+.++.....+
T Consensus 546 -~~las~~~Dg~v~lWd~------~~~---~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~- 614 (793)
T PLN00181 546 -SQVASSNFEGVVQVWDV------ARS---QLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI- 614 (793)
T ss_pred -CEEEEEeCCCeEEEEEC------CCC---eEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEE-
Confidence 68999999999999999 445 6778889999999999999767889999999999999999887655442
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc-eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK-PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSS 242 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~-~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~ 242 (719)
. +...|.++.|++..+.+|++|+.||.|++||+++.+ .+..+. +|...|.++.|. ++ ..|++++.|+
T Consensus 615 --~-----~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~-~h~~~V~~v~f~-~~-~~lvs~s~D~-- 682 (793)
T PLN00181 615 --K-----TKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMI-GHSKTVSYVRFV-DS-STLVSSSTDN-- 682 (793)
T ss_pred --e-----cCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEec-CCCCCEEEEEEe-CC-CEEEEEECCC--
Confidence 1 234789999976545799999999999999998865 455555 789999999997 44 4788999988
Q ss_pred CcEEEEecCCC-----CCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEe-------------c
Q 046451 243 PALRLWDMRNT-----MSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSEL-------------P 304 (719)
Q Consensus 243 ~~I~lwDl~~~-----~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l-------------~ 304 (719)
+|+|||++.. ..++..+.+|...+.+++|++ ++.+|++|+.|+.|+||+......+..+ .
T Consensus 683 -~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~-~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~ 760 (793)
T PLN00181 683 -TLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSV-SDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVD 760 (793)
T ss_pred -EEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcC-CCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccC
Confidence 9999999743 256788999999999999999 8899999999999999998765433221 2
Q ss_pred CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeC
Q 046451 305 AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337 (719)
Q Consensus 305 ~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~ 337 (719)
.+...|.+++|++++ ..|++|+.||.|+||++
T Consensus 761 ~~~~~V~~v~ws~~~-~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 761 DASQFISSVCWRGQS-STLVAANSTGNIKILEM 792 (793)
T ss_pred CCCcEEEEEEEcCCC-CeEEEecCCCcEEEEec
Confidence 345679999999999 78999999999999996
No 30
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=5.3e-33 Score=270.01 Aligned_cols=278 Identities=18% Similarity=0.321 Sum_probs=234.8
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
...|+|+.+. ...+++|..|.+ |+|||.+...+... ..+|.+.|.|+.|.. ++
T Consensus 197 skgVYClQYD--D~kiVSGlrDnT----------ikiWD~n~~~c~~~-----L~GHtGSVLCLqyd~----------rv 249 (499)
T KOG0281|consen 197 SKGVYCLQYD--DEKIVSGLRDNT----------IKIWDKNSLECLKI-----LTGHTGSVLCLQYDE----------RV 249 (499)
T ss_pred CCceEEEEec--chhhhcccccCc----------eEEeccccHHHHHh-----hhcCCCcEEeeeccc----------eE
Confidence 3567777764 456778866554 59999886555443 368999999999965 69
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCcc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~ 166 (719)
|++|+.|.+|+|||+ .++ +.+.++..|.+.|..+.|+. .++++++.|.+|.|||+.....+. +.
T Consensus 250 iisGSSDsTvrvWDv------~tg---e~l~tlihHceaVLhlrf~n---g~mvtcSkDrsiaVWdm~sps~it----~r 313 (499)
T KOG0281|consen 250 IVSGSSDSTVRVWDV------NTG---EPLNTLIHHCEAVLHLRFSN---GYMVTCSKDRSIAVWDMASPTDIT----LR 313 (499)
T ss_pred EEecCCCceEEEEec------cCC---chhhHHhhhcceeEEEEEeC---CEEEEecCCceeEEEeccCchHHH----HH
Confidence 999999999999999 677 99999999999999999964 799999999999999998766332 33
Q ss_pred CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEE
Q 046451 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALR 246 (719)
Q Consensus 167 ~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~ 246 (719)
....+|...|+.+.|+.. ++++++.|.+|++|++.+++.+.++. +|...|.|+.+. ..++++|+.|. +|+
T Consensus 314 rVLvGHrAaVNvVdfd~k---yIVsASgDRTikvW~~st~efvRtl~-gHkRGIAClQYr---~rlvVSGSSDn---tIR 383 (499)
T KOG0281|consen 314 RVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWSTSTCEFVRTLN-GHKRGIACLQYR---DRLVVSGSSDN---TIR 383 (499)
T ss_pred HHHhhhhhheeeeccccc---eEEEecCCceEEEEeccceeeehhhh-cccccceehhcc---CeEEEecCCCc---eEE
Confidence 344568889999999754 89999999999999999999999999 899999988876 35899999998 999
Q ss_pred EEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe---------EEEEecCCCCCeEEeEEcC
Q 046451 247 LWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE---------IVSELPAGTNWNFDIHWYP 317 (719)
Q Consensus 247 lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~---------~~~~l~~h~~~v~~l~~sp 317 (719)
+||+..+ .+++.++||+.-|.++.|. .+.|++|+.||+|+|||+..+. ++..+..|.+.|+.+.|..
T Consensus 384 lwdi~~G-~cLRvLeGHEeLvRciRFd---~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~ 459 (499)
T KOG0281|consen 384 LWDIECG-ACLRVLEGHEELVRCIRFD---NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE 459 (499)
T ss_pred EEecccc-HHHHHHhchHHhhhheeec---CceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeecc
Confidence 9999875 7899999999999999994 5889999999999999998764 3455667899999999974
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 318 KIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 318 dg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
..|++++.|.+|.|||+.++-...
T Consensus 460 ---fqIvsssHddtILiWdFl~~~~~~ 483 (499)
T KOG0281|consen 460 ---FQIISSSHDDTILIWDFLNGPPSA 483 (499)
T ss_pred ---eEEEeccCCCeEEEEEcCCCCccc
Confidence 568899999999999999876543
No 31
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=2.3e-32 Score=263.25 Aligned_cols=291 Identities=17% Similarity=0.325 Sum_probs=251.3
Q ss_pred cccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeec---ccCCCCCceeeeecCCCCCC
Q 046451 3 CIKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVG---ESPSSERFNRLAWGKNGSGS 79 (719)
Q Consensus 3 ~l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~---~~~~~~~V~~l~~sp~g~~~ 79 (719)
++...+.+-|..|||||+||++|+.||.| ++|++.++...+.++... ..-++..|.|+.|+.|.
T Consensus 209 KFg~KSh~EcA~FSPDgqyLvsgSvDGFi----------EVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDs--- 275 (508)
T KOG0275|consen 209 KFGQKSHVECARFSPDGQYLVSGSVDGFI----------EVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDS--- 275 (508)
T ss_pred ecccccchhheeeCCCCceEeecccccee----------eeehhccchhhhhhhhhhhcceeecccceEEEeecccH---
Confidence 34456778899999999999999998877 778877766555544421 23478899999999998
Q ss_pred CCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec-cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC
Q 046451 80 EDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS-RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE 158 (719)
Q Consensus 80 ~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~ 158 (719)
..|++|+.||.|++|.+ .++ .+++.+. .|+..|+|+.|+. |+..+++++.|.+++|.-+.+++.
T Consensus 276 -----EMlAsGsqDGkIKvWri------~tG---~ClRrFdrAHtkGvt~l~FSr-D~SqiLS~sfD~tvRiHGlKSGK~ 340 (508)
T KOG0275|consen 276 -----EMLASGSQDGKIKVWRI------ETG---QCLRRFDRAHTKGVTCLSFSR-DNSQILSASFDQTVRIHGLKSGKC 340 (508)
T ss_pred -----HHhhccCcCCcEEEEEE------ecc---hHHHHhhhhhccCeeEEEEcc-CcchhhcccccceEEEeccccchh
Confidence 79999999999999999 677 8888887 7999999999999 788999999999999999999998
Q ss_pred CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-CCCCceeEEEECCCCCcEEEEEe
Q 046451 159 PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-SIKRRCSVLQWNPDVATQLVVAS 237 (719)
Q Consensus 159 ~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-~~~~~i~~l~~sp~g~~~l~~~s 237 (719)
...| .+|.+.|+...|.++| +.+++++.||+|++|+.++.+++.+|.. +....|+++-.-|.+...+++|.
T Consensus 341 LKEf-------rGHsSyvn~a~ft~dG-~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCN 412 (508)
T KOG0275|consen 341 LKEF-------RGHSSYVNEATFTDDG-HHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCN 412 (508)
T ss_pred HHHh-------cCccccccceEEcCCC-CeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEc
Confidence 7663 4588899999999998 6899999999999999999999998875 45567888888888888899998
Q ss_pred CCCCCCcEEEEecCCCCCceEEeeC---CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeE
Q 046451 238 DEDSSPALRLWDMRNTMSPVKEFVG---HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIH 314 (719)
Q Consensus 238 ~d~~~~~I~lwDl~~~~~~~~~~~~---h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~ 314 (719)
..+ +|+|.++.. ..++.+.. ..+...+.+.+| .|.++++.++|+.+++|.+.+|+...++..|...+..++
T Consensus 413 rsn---tv~imn~qG--QvVrsfsSGkREgGdFi~~~lSp-kGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~ 486 (508)
T KOG0275|consen 413 RSN---TVYIMNMQG--QVVRSFSSGKREGGDFINAILSP-KGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLT 486 (508)
T ss_pred CCC---eEEEEeccc--eEEeeeccCCccCCceEEEEecC-CCcEEEEEccCcEEEEEEeecCceeeeeecccccccccc
Confidence 887 899999863 56666643 234566778999 999999999999999999999999999999999999999
Q ss_pred EcCCCCCEEEEEeCCCcEEEEe
Q 046451 315 WYPKIPGVISASSFDGKIGIYN 336 (719)
Q Consensus 315 ~spdg~~~las~s~Dg~I~iwd 336 (719)
-+|.. ++||+-++||.+++|.
T Consensus 487 HHPHq-NllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 487 HHPHQ-NLLASYSEDGLLKLWK 507 (508)
T ss_pred cCccc-chhhhhcccchhhhcC
Confidence 99998 8999999999999995
No 32
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.3e-31 Score=283.91 Aligned_cols=297 Identities=19% Similarity=0.282 Sum_probs=251.3
Q ss_pred cCccceEEEc-CCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 7 INRSASVAFA-PDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 7 ~~~V~~vafS-pdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
.+.|.+|+|- |+.++||++++.+.+ ++|++.+..+. -..+|.+.|.++.-...| .
T Consensus 323 ndEI~Dm~~lG~e~~~laVATNs~~l----------r~y~~~~~~c~------ii~GH~e~vlSL~~~~~g--------~ 378 (775)
T KOG0319|consen 323 NDEILDMKFLGPEESHLAVATNSPEL----------RLYTLPTSYCQ------IIPGHTEAVLSLDVWSSG--------D 378 (775)
T ss_pred chhheeeeecCCccceEEEEeCCCce----------EEEecCCCceE------EEeCchhheeeeeecccC--------c
Confidence 4678888874 567899999877665 88877755443 236799999999944444 5
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC-
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP- 164 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~- 164 (719)
+|++|+.|.++++|.+++. .....++....+|++.|.+++++.....+|++++.|++|++|++...+.......
T Consensus 379 llat~sKD~svilWr~~~~-----~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~ 453 (775)
T KOG0319|consen 379 LLATGSKDKSVILWRLNNN-----CSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVL 453 (775)
T ss_pred EEEEecCCceEEEEEecCC-----cchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCccccccccee
Confidence 9999999999999988321 1112556777899999999999887778999999999999999987333222111
Q ss_pred -ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC
Q 046451 165 -LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 165 -l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~ 243 (719)
.+.....|...|+|+++++++ .+|++|+.|.+.+||+++..+...++. +|...+.++.|++.. .++++++.|.
T Consensus 454 ~~~~t~~aHdKdIN~Vaia~nd-kLiAT~SqDktaKiW~le~~~l~~vLs-GH~RGvw~V~Fs~~d-q~laT~SgD~--- 527 (775)
T KOG0319|consen 454 TCRYTERAHDKDINCVAIAPND-KLIATGSQDKTAKIWDLEQLRLLGVLS-GHTRGVWCVSFSKND-QLLATCSGDK--- 527 (775)
T ss_pred hhhHHHHhhcccccceEecCCC-ceEEecccccceeeecccCceEEEEee-CCccceEEEEecccc-ceeEeccCCc---
Confidence 222345688999999999996 699999999999999999999999999 999999999999986 6899999998
Q ss_pred cEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEE
Q 046451 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVI 323 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~l 323 (719)
+|+||.+.+. .++++|.||+..|..+.|-. ++..|++|+.||.|+||++++++++.+++.|++.|++++.++.. ..+
T Consensus 528 TvKIW~is~f-SClkT~eGH~~aVlra~F~~-~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~-~~~ 604 (775)
T KOG0319|consen 528 TVKIWSISTF-SCLKTFEGHTSAVLRASFIR-NGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLL-DMF 604 (775)
T ss_pred eEEEEEeccc-eeeeeecCccceeEeeeeee-CCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCcc-cee
Confidence 9999999874 89999999999999999998 89999999999999999999999999999999999999999998 699
Q ss_pred EEEeCCCcEEEEeCCCCc
Q 046451 324 SASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 324 as~s~Dg~I~iwd~~~~~ 341 (719)
+||+.||+|.+|.=.+.+
T Consensus 605 ~tgg~Dg~i~~wkD~Te~ 622 (775)
T KOG0319|consen 605 VTGGGDGRIIFWKDVTEE 622 (775)
T ss_pred EecCCCeEEEEeecCcHH
Confidence 999999999999755543
No 33
>PF07304 SRA1: Steroid receptor RNA activator (SRA1); InterPro: IPR009917 This entry consists of several hypothetical mammalian steroid receptor RNA activator proteins. The SRA-RNAs encode stable proteins that are widely expressed and upregulated in breast cancer cell lines. SRA-RNA is a steroid receptor co-activator which acts as a functional RNA. This domain is also found at the C terminus of Sec31, a component of the coat protein complex II (COPII, which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). COPII has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. ; PDB: 2YRU_A.
Probab=100.00 E-value=3.6e-34 Score=262.50 Aligned_cols=111 Identities=35% Similarity=0.549 Sum_probs=83.3
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHHHHhCCCCCCccchhhhhhHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHhcCCh
Q 046451 602 VDTSNVPAHQKPVINTLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDF 681 (719)
Q Consensus 602 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~k~~~~d~~krl~~l~~~l~~~~ls~~~~~~l~~l~~~~~~~~~ 681 (719)
.+.++.++....|.++|.. |+++.+.|. +...||++||++|||++||||||+|+||++|+++|++||+||++|||
T Consensus 32 ~~~~~~p~~~~~i~~~~~~-L~~v~~~~~----~~~~kr~~~D~~KRL~iLfd~ln~g~Ls~~v~~~L~~L~~aL~~~d~ 106 (157)
T PF07304_consen 32 DPSSIPPEDEQPIEEVLRE-LQRVLEACP----PSIKKRVVDDIEKRLNILFDHLNNGKLSKPVVDKLHQLAQALQARDY 106 (157)
T ss_dssp ------------HHHHHHH-HHHHHHHHH----TTS-HHHHHHHHHHHHHHHHHHHHT-S-HHHHHHHHHHHHHHHHT-H
T ss_pred CCCCCCcchhhhHHHHHHH-HHHHHHHcc----cccchhHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCH
Confidence 3444455555555555543 444444432 45578999999999999999999999999999999999999999999
Q ss_pred hHHHhheeeeecCCcccchhHHHHHHHHHhcccccc
Q 046451 682 GTALQIQVLLTTSDWDECNFWLATLKRMIKTRQNVR 717 (719)
Q Consensus 682 ~~a~~i~~~l~~~~~~e~~~w~~g~k~li~~~~~~~ 717 (719)
++|++||++||++||+||++||+||||||.++|++.
T Consensus 107 ~~A~~Ih~~L~t~h~~E~~~WmvGVKRLI~~~r~~~ 142 (157)
T PF07304_consen 107 DAADEIHVDLMTDHVDECGNWMVGVKRLIAMARNLP 142 (157)
T ss_dssp HHHHHHHHHHHHSSHHHHTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHhhhHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999875
No 34
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=2.2e-31 Score=281.88 Aligned_cols=346 Identities=18% Similarity=0.245 Sum_probs=274.0
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceE
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLV 87 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~l 87 (719)
..|+|++-++|.-+||+|..||.| +||++..... .+...+|+..|+++.|...| .+|
T Consensus 66 ~evt~l~~~~d~l~lAVGYaDGsV----------qif~~~s~~~-----~~tfngHK~AVt~l~fd~~G--------~rl 122 (888)
T KOG0306|consen 66 AEVTCLRSSDDILLLAVGYADGSV----------QIFSLESEEI-----LITFNGHKAAVTTLKFDKIG--------TRL 122 (888)
T ss_pred ceEEEeeccCCcceEEEEecCceE----------EeeccCCCce-----eeeecccccceEEEEEcccC--------ceE
Confidence 478899889999999999998877 8898875422 34457899999999999999 799
Q ss_pred EEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccC
Q 046451 88 AGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRG 167 (719)
Q Consensus 88 asgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~ 167 (719)
++|+.|+.|.+||+ ... .-...+.+|++.|+..-|.. +.++|++.+.|+.|++||+.+..+..+
T Consensus 123 aSGskDt~IIvwDl------V~E---~Gl~rL~GHkd~iT~~~F~~-~~~~lvS~sKDs~iK~WdL~tqhCf~T------ 186 (888)
T KOG0306|consen 123 ASGSKDTDIIVWDL------VGE---EGLFRLRGHKDSITQALFLN-GDSFLVSVSKDSMIKFWDLETQHCFET------ 186 (888)
T ss_pred eecCCCccEEEEEe------ccc---eeeEEeecchHHHhHHhccC-CCeEEEEeccCceEEEEecccceeeeE------
Confidence 99999999999999 333 66889999999999999987 789999999999999999999887654
Q ss_pred CCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC------------------------C-----------c-----
Q 046451 168 NGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK------------------------Q-----------K----- 207 (719)
Q Consensus 168 ~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~------------------------~-----------~----- 207 (719)
...|++.|+.++++. +++++++.|+.+++|++.. + +
T Consensus 187 -hvd~r~Eiw~l~~~~---~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~ 262 (888)
T KOG0306|consen 187 -HVDHRGEIWALVLDE---KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQ 262 (888)
T ss_pred -EecccceEEEEEEec---ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEe
Confidence 345888999999987 3788899999999998700 0 0
Q ss_pred ------------------------------------------------------------------------e-------
Q 046451 208 ------------------------------------------------------------------------P------- 208 (719)
Q Consensus 208 ------------------------------------------------------------------------~------- 208 (719)
.
T Consensus 263 g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~ 342 (888)
T KOG0306|consen 263 GADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLA 342 (888)
T ss_pred cchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEee
Confidence 0
Q ss_pred -----e------------------EEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCC
Q 046451 209 -----V------------------ISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTK 265 (719)
Q Consensus 209 -----~------------------~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~ 265 (719)
. .++. +|...|.+++++.+. .++++++.+ .|++|+..+. ++++++...
T Consensus 343 nNtv~~ysl~~s~~~~p~~~~~~~i~~~-GHR~dVRsl~vS~d~-~~~~Sga~~----SikiWn~~t~-kciRTi~~~-- 413 (888)
T KOG0306|consen 343 NNTVEWYSLENSGKTSPEADRTSNIEIG-GHRSDVRSLCVSSDS-ILLASGAGE----SIKIWNRDTL-KCIRTITCG-- 413 (888)
T ss_pred cCceEEEEeccCCCCCccccccceeeec-cchhheeEEEeecCc-eeeeecCCC----cEEEEEccCc-ceeEEeccc--
Confidence 0 0001 456667778888775 344444444 7999998765 778888643
Q ss_pred CeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccccc
Q 046451 266 GVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345 (719)
Q Consensus 266 ~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~ 345 (719)
.+.+..|.| +++++++|...|.+.+||+.+...+.+++.|.+.|++++.+||+ .-+++||.|.+|++||+.--..+..
T Consensus 414 y~l~~~Fvp-gd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~-~g~vT~saDktVkfWdf~l~~~~~g 491 (888)
T KOG0306|consen 414 YILASKFVP-GDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDN-KGFVTGSADKTVKFWDFKLVVSVPG 491 (888)
T ss_pred cEEEEEecC-CCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCC-CceEEecCCcEEEEEeEEEEeccCc
Confidence 889999999 88999999999999999999999999999999999999999999 7899999999999999865333211
Q ss_pred CC-CCCCCCCccCcceecCCCceeeeeCCcEEEEccCCCCCc----------cccccccccceeeccCCCCCC
Q 046451 346 GD-SNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSSAGH----------TSENSQHAPVHGVDQSKYGMV 407 (719)
Q Consensus 346 ~~-~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~~~~----------~~~~~~~~~v~~v~~s~~~~~ 407 (719)
.. ..+..-+.+....-.....+++|+|||+++++.-+..+. .+|+||+.+|.++|||+|+.-
T Consensus 492 t~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSkl 564 (888)
T KOG0306|consen 492 TQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKL 564 (888)
T ss_pred ccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCe
Confidence 11 111212223333444556789999999999997766532 458999999999999999654
No 35
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=5.7e-30 Score=261.68 Aligned_cols=336 Identities=16% Similarity=0.267 Sum_probs=260.6
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
|..-|.|++|||||+++|+.+.||.+ .|||=.+++...++ .....|++.|++|+|+||+ .
T Consensus 189 HskFV~~VRysPDG~~Fat~gsDgki----------~iyDGktge~vg~l--~~~~aHkGsIfalsWsPDs--------~ 248 (603)
T KOG0318|consen 189 HSKFVNCVRYSPDGSRFATAGSDGKI----------YIYDGKTGEKVGEL--EDSDAHKGSIFALSWSPDS--------T 248 (603)
T ss_pred cccceeeEEECCCCCeEEEecCCccE----------EEEcCCCccEEEEe--cCCCCccccEEEEEECCCC--------c
Confidence 45669999999999999999988877 77777666554443 3356799999999999998 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCC------C--C--------------------------CCCCceeeeccccCCEEEEEE
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSG------E--T--------------------------GGNPLIAHLSRHKGPVRGLEF 131 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~------~--~--------------------------~~~~~~~~l~~h~~~V~~l~f 131 (719)
.|++++.|.+++|||+.+..... + . .....++.+.+|...|+++..
T Consensus 249 ~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv 328 (603)
T KOG0318|consen 249 QFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTV 328 (603)
T ss_pred eEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEE
Confidence 99999999999999986432110 0 0 111345667899999999999
Q ss_pred eCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce---
Q 046451 132 NSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP--- 208 (719)
Q Consensus 132 sp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~--- 208 (719)
++ ++.+|++|+.||.|.-||+.++..-+. ....|...|.+++-+..+ .+++++.|.++++.++..+..
T Consensus 329 ~~-d~~~i~SgsyDG~I~~W~~~~g~~~~~------~g~~h~nqI~~~~~~~~~--~~~t~g~Dd~l~~~~~~~~~~t~~ 399 (603)
T KOG0318|consen 329 SP-DGKTIYSGSYDGHINSWDSGSGTSDRL------AGKGHTNQIKGMAASESG--ELFTIGWDDTLRVISLKDNGYTKS 399 (603)
T ss_pred cC-CCCEEEeeccCceEEEEecCCcccccc------ccccccceEEEEeecCCC--cEEEEecCCeEEEEecccCccccc
Confidence 99 779999999999999999998876432 235688899999988765 578889999999997742210
Q ss_pred -----------e-----------------EEec-------CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCC
Q 046451 209 -----------V-----------------ISFS-------ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNT 253 (719)
Q Consensus 209 -----------~-----------------~~~~-------~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~ 253 (719)
+ ..+. ....-...++++++++ ..+++|+.|+ .|+||.+...
T Consensus 400 ~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~-~~vaVGG~Dg---kvhvysl~g~ 475 (603)
T KOG0318|consen 400 EVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDG-SEVAVGGQDG---KVHVYSLSGD 475 (603)
T ss_pred ceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCC-CEEEEecccc---eEEEEEecCC
Confidence 0 0000 0123345678999998 5799999998 8999999764
Q ss_pred C-CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEE-EecCCCCCeEEeEEcCCCCCEEEEEeCCCc
Q 046451 254 M-SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS-ELPAGTNWNFDIHWYPKIPGVISASSFDGK 331 (719)
Q Consensus 254 ~-~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~-~l~~h~~~v~~l~~spdg~~~las~s~Dg~ 331 (719)
. .....+..|...|++++||| |+.+|++|...+.+.+||..+.+... .+.-|...|.+++|+|++ .++|||+.|-.
T Consensus 476 ~l~ee~~~~~h~a~iT~vaySp-d~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n-~~vATGSlDt~ 553 (603)
T KOG0318|consen 476 ELKEEAKLLEHRAAITDVAYSP-DGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNN-KLVATGSLDTN 553 (603)
T ss_pred cccceeeeecccCCceEEEECC-CCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCc-eEEEeccccce
Confidence 3 23335667999999999999 99999999999999999999887633 334599999999999998 79999999999
Q ss_pred EEEEeCCCCccc--ccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEc
Q 046451 332 IGIYNIEGCSRY--GVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFH 379 (719)
Q Consensus 332 I~iwd~~~~~~~--~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~ 379 (719)
|.||+++.-... ....|..+ ++...|+...+.++.+.|--+..|+
T Consensus 554 Viiysv~kP~~~i~iknAH~~g---Vn~v~wlde~tvvSsG~Da~iK~W~ 600 (603)
T KOG0318|consen 554 VIIYSVKKPAKHIIIKNAHLGG---VNSVAWLDESTVVSSGQDANIKVWN 600 (603)
T ss_pred EEEEEccChhhheEeccccccC---ceeEEEecCceEEeccCcceeEEec
Confidence 999999875433 23333333 4677899888888888888877775
No 36
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=1.5e-30 Score=243.07 Aligned_cols=263 Identities=19% Similarity=0.369 Sum_probs=223.0
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceE
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLV 87 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~l 87 (719)
..|+.+...||+++||+++ ...|++||++...... +....+|...|+.+.|..+| +++
T Consensus 41 sqVNrLeiTpdk~~LAaa~-----------~qhvRlyD~~S~np~P---v~t~e~h~kNVtaVgF~~dg--------rWM 98 (311)
T KOG0315|consen 41 SQVNRLEITPDKKDLAAAG-----------NQHVRLYDLNSNNPNP---VATFEGHTKNVTAVGFQCDG--------RWM 98 (311)
T ss_pred cceeeEEEcCCcchhhhcc-----------CCeeEEEEccCCCCCc---eeEEeccCCceEEEEEeecC--------eEE
Confidence 5799999999999999985 4567999999876643 34456788999999999999 899
Q ss_pred EEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccC
Q 046451 88 AGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRG 167 (719)
Q Consensus 88 asgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~ 167 (719)
++|++||+++|||+.. ........|...|+++..+| +...|++|..+|.|+|||+.+......+ ...
T Consensus 99 yTgseDgt~kIWdlR~----------~~~qR~~~~~spVn~vvlhp-nQteLis~dqsg~irvWDl~~~~c~~~l--iPe 165 (311)
T KOG0315|consen 99 YTGSEDGTVKIWDLRS----------LSCQRNYQHNSPVNTVVLHP-NQTELISGDQSGNIRVWDLGENSCTHEL--IPE 165 (311)
T ss_pred EecCCCceEEEEeccC----------cccchhccCCCCcceEEecC-CcceEEeecCCCcEEEEEccCCcccccc--CCC
Confidence 9999999999999953 22333445789999999999 7788999999999999999988766553 111
Q ss_pred CCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc------eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCC
Q 046451 168 NGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK------PVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241 (719)
Q Consensus 168 ~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~------~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~ 241 (719)
....|.++...++| ..++.+...|++++|++-+.. ++..+. .|.+.+..+.+|||+ ++|++++.|.
T Consensus 166 ----~~~~i~sl~v~~dg-sml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~-ah~~~il~C~lSPd~-k~lat~ssdk- 237 (311)
T KOG0315|consen 166 ----DDTSIQSLTVMPDG-SMLAAANNKGNCYVWRLLNHQTASELEPVHKFQ-AHNGHILRCLLSPDV-KYLATCSSDK- 237 (311)
T ss_pred ----CCcceeeEEEcCCC-cEEEEecCCccEEEEEccCCCccccceEhhhee-cccceEEEEEECCCC-cEEEeecCCc-
Confidence 23479999999998 588889999999999997653 445566 789999999999998 5899999998
Q ss_pred CCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEc
Q 046451 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWY 316 (719)
Q Consensus 242 ~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~s 316 (719)
+++||+.++..+....+.+|..++.+++||. |+.||++++.|+.+++||+..++.+..+.+|.....+++.+
T Consensus 238 --tv~iwn~~~~~kle~~l~gh~rWvWdc~FS~-dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 238 --TVKIWNTDDFFKLELVLTGHQRWVWDCAFSA-DGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred --eEEEEecCCceeeEEEeecCCceEEeeeecc-CccEEEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence 9999999876556677899999999999999 99999999999999999999999999999998877777654
No 37
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.98 E-value=3.8e-30 Score=252.66 Aligned_cols=285 Identities=15% Similarity=0.282 Sum_probs=233.4
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
-+|.+.|.+|+.+|+.+++|||+.|..- .||++..++.. ....+|++.|+++.|+.+|
T Consensus 61 ~~H~~svFavsl~P~~~l~aTGGgDD~A----------flW~~~~ge~~-----~eltgHKDSVt~~~Fshdg------- 118 (399)
T KOG0296|consen 61 DKHTDSVFAVSLHPNNNLVATGGGDDLA----------FLWDISTGEFA-----GELTGHKDSVTCCSFSHDG------- 118 (399)
T ss_pred hhcCCceEEEEeCCCCceEEecCCCceE----------EEEEccCCcce-----eEecCCCCceEEEEEccCc-------
Confidence 4688999999999999999999866544 89999877632 3346799999999999999
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
.+||+|..+|.|+||+. .++ .....+...-+.|.=+.|+| ...+|+.|+.||.|.+|.+.+....+.
T Consensus 119 -tlLATGdmsG~v~v~~~------stg---~~~~~~~~e~~dieWl~WHp-~a~illAG~~DGsvWmw~ip~~~~~kv-- 185 (399)
T KOG0296|consen 119 -TLLATGDMSGKVLVFKV------STG---GEQWKLDQEVEDIEWLKWHP-RAHILLAGSTDGSVWMWQIPSQALCKV-- 185 (399)
T ss_pred -eEEEecCCCccEEEEEc------ccC---ceEEEeecccCceEEEEecc-cccEEEeecCCCcEEEEECCCcceeeE--
Confidence 89999999999999998 555 55666665667888899999 889999999999999999998644333
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce-----------------------
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC----------------------- 220 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i----------------------- 220 (719)
..+|...+++=.|.|+| +.++++..||+|++||..++.++..+........
T Consensus 186 -----~~Gh~~~ct~G~f~pdG-Kr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~ 259 (399)
T KOG0296|consen 186 -----MSGHNSPCTCGEFIPDG-KRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACG 259 (399)
T ss_pred -----ecCCCCCcccccccCCC-ceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEE
Confidence 34588899999999997 5899999999999999999887776652111111
Q ss_pred ---------------------------eEEEE---CCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEE
Q 046451 221 ---------------------------SVLQW---NPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAM 270 (719)
Q Consensus 221 ---------------------------~~l~~---sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v 270 (719)
.++.+ +..- .++++|+-|+ +|.|||+... .++..-.|...|+.+
T Consensus 260 ~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~l-pL~A~G~vdG---~i~iyD~a~~--~~R~~c~he~~V~~l 333 (399)
T KOG0296|consen 260 VNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKL-PLAACGSVDG---TIAIYDLAAS--TLRHICEHEDGVTKL 333 (399)
T ss_pred EccccceEEEecCCCCccccccchhhhhhhhhccccccc-chhhcccccc---eEEEEecccc--hhheeccCCCceEEE
Confidence 11111 2121 2455666666 9999999753 355566799999999
Q ss_pred EeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 271 SWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 271 ~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
.|-+ ..+|++++.||.|++||.++|+++.++.+|...|.+++++++. ++++|+|.|++.+||++.
T Consensus 334 ~w~~--t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~-~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 334 KWLN--TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQK-RLVVTVSDDNTALVFEVP 398 (399)
T ss_pred EEcC--cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCC-cEEEEecCCCeEEEEecC
Confidence 9986 5789999999999999999999999999999999999999998 899999999999999875
No 38
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.98 E-value=9.3e-31 Score=255.67 Aligned_cols=253 Identities=20% Similarity=0.346 Sum_probs=229.8
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
.+|.+.|.|+++.|.+ .++++|+.|++|+|||+ .++ ++..++.+|...|..+++++ .--||+
T Consensus 148 ~gHlgWVr~vavdP~n--------~wf~tgs~DrtikIwDl------atg---~LkltltGhi~~vr~vavS~-rHpYlF 209 (460)
T KOG0285|consen 148 SGHLGWVRSVAVDPGN--------EWFATGSADRTIKIWDL------ATG---QLKLTLTGHIETVRGVAVSK-RHPYLF 209 (460)
T ss_pred hhccceEEEEeeCCCc--------eeEEecCCCceeEEEEc------ccC---eEEEeecchhheeeeeeecc-cCceEE
Confidence 4689999999999986 79999999999999999 777 89999999999999999998 678999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
+++.|+.|+.||++..+.++.+ .+|-+.|.|++.+|.. .+|++|+.|.+++|||+++...+..+. +|...|
T Consensus 210 s~gedk~VKCwDLe~nkvIR~Y-------hGHlS~V~~L~lhPTl-dvl~t~grDst~RvWDiRtr~~V~~l~-GH~~~V 280 (460)
T KOG0285|consen 210 SAGEDKQVKCWDLEYNKVIRHY-------HGHLSGVYCLDLHPTL-DVLVTGGRDSTIRVWDIRTRASVHVLS-GHTNPV 280 (460)
T ss_pred EecCCCeeEEEechhhhhHHHh-------ccccceeEEEeccccc-eeEEecCCcceEEEeeecccceEEEec-CCCCcc
Confidence 9999999999999998877663 4678899999999986 599999999999999999999999999 999999
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEE
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV 300 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~ 300 (719)
..+.+.+... .+++|+.|. +|++||++.+ +...++..|...|.+++.+| ....|++++.| .|+.|++-.|+.+
T Consensus 281 ~~V~~~~~dp-qvit~S~D~---tvrlWDl~ag-kt~~tlt~hkksvral~lhP-~e~~fASas~d-nik~w~~p~g~f~ 353 (460)
T KOG0285|consen 281 ASVMCQPTDP-QVITGSHDS---TVRLWDLRAG-KTMITLTHHKKSVRALCLHP-KENLFASASPD-NIKQWKLPEGEFL 353 (460)
T ss_pred eeEEeecCCC-ceEEecCCc---eEEEeeeccC-ceeEeeecccceeeEEecCC-chhhhhccCCc-cceeccCCccchh
Confidence 9999998764 799999998 9999999987 55778888999999999999 88888888877 4899999999999
Q ss_pred EEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCC
Q 046451 301 SELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSN 349 (719)
Q Consensus 301 ~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~ 349 (719)
..+.+|+..|.+++.+.|+ ++++|+++|.|.+||.+++-.+..++..
T Consensus 354 ~nlsgh~~iintl~~nsD~--v~~~G~dng~~~fwdwksg~nyQ~~~t~ 400 (460)
T KOG0285|consen 354 QNLSGHNAIINTLSVNSDG--VLVSGGDNGSIMFWDWKSGHNYQRGQTI 400 (460)
T ss_pred hccccccceeeeeeeccCc--eEEEcCCceEEEEEecCcCccccccccc
Confidence 9999999999999999997 9999999999999999999887755433
No 39
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.98 E-value=8.8e-31 Score=258.17 Aligned_cols=297 Identities=20% Similarity=0.330 Sum_probs=241.8
Q ss_pred cccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCC
Q 046451 3 CIKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDF 82 (719)
Q Consensus 3 ~l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~ 82 (719)
++.|.+.|.+|.-. +++|++|++||.+ +|||...... ....+|.+.|.+++|.-.....
T Consensus 101 ~~~hdDWVSsv~~~--~~~IltgsYDg~~----------riWd~~Gk~~------~~~~Ght~~ik~v~~v~~n~~~--- 159 (423)
T KOG0313|consen 101 CFLHDDWVSSVKGA--SKWILTGSYDGTS----------RIWDLKGKSI------KTIVGHTGPIKSVAWVIKNSSS--- 159 (423)
T ss_pred cccchhhhhhhccc--CceEEEeecCCee----------EEEecCCceE------EEEecCCcceeeeEEEecCCcc---
Confidence 46677888888888 8899999999987 7788763221 2236799999999986554322
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC--CC
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE--PS 160 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~--~~ 160 (719)
..+++++.|.++++|.++.... . .+.++...+|...|.+++... ++..+++|+.|..|+||+..+... ..
T Consensus 160 --~~fvsas~Dqtl~Lw~~~~~~~--~---~~~~~~~~GHk~~V~sVsv~~-sgtr~~SgS~D~~lkiWs~~~~~~~~~E 231 (423)
T KOG0313|consen 160 --CLFVSASMDQTLRLWKWNVGEN--K---VKALKVCRGHKRSVDSVSVDS-SGTRFCSGSWDTMLKIWSVETDEEDELE 231 (423)
T ss_pred --ceEEEecCCceEEEEEecCchh--h---hhHHhHhcccccceeEEEecC-CCCeEEeecccceeeecccCCCcccccc
Confidence 5799999999999999854221 1 134445559999999999999 899999999999999999432110 00
Q ss_pred cc----------------CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEE
Q 046451 161 HF----------------PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQ 224 (719)
Q Consensus 161 ~~----------------~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~ 224 (719)
.+ ........+|.+.|.++.|++. ..+++++.|.+|+.||+.++..+.++. ....+.+++
T Consensus 232 ~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~--~v~yS~SwDHTIk~WDletg~~~~~~~--~~ksl~~i~ 307 (423)
T KOG0313|consen 232 SSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDA--TVIYSVSWDHTIKVWDLETGGLKSTLT--TNKSLNCIS 307 (423)
T ss_pred ccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCC--CceEeecccceEEEEEeecccceeeee--cCcceeEee
Confidence 00 0011234579999999999985 489999999999999999999999887 788899999
Q ss_pred ECCCCCcEEEEEeCCCCCCcEEEEecCCCCC--ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe-EEE
Q 046451 225 WNPDVATQLVVASDEDSSPALRLWDMRNTMS--PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE-IVS 301 (719)
Q Consensus 225 ~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~--~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~-~~~ 301 (719)
+++.. .+|++|+.|. .|++||.|++.. ....|.+|...|.++.|+|.+...|++++.||++++||+++-+ .++
T Consensus 308 ~~~~~-~Ll~~gssdr---~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~ply 383 (423)
T KOG0313|consen 308 YSPLS-KLLASGSSDR---HIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLY 383 (423)
T ss_pred ccccc-ceeeecCCCC---ceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcce
Confidence 99986 6899999998 899999998653 3467889999999999999888899999999999999999877 899
Q ss_pred EecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 302 ~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
.+.+|.+.|.++.|+..+ +|++|+.|++|+|+.-.
T Consensus 384 dI~~h~DKvl~vdW~~~~--~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 384 DIAGHNDKVLSVDWNEGG--LIVSGGADNKLRIFKGS 418 (423)
T ss_pred eeccCCceEEEEeccCCc--eEEeccCcceEEEeccc
Confidence 999999999999999765 89999999999998754
No 40
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=7.3e-31 Score=257.47 Aligned_cols=253 Identities=19% Similarity=0.289 Sum_probs=227.2
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
..+|...|+.+-|+|+- -+++++++|++|++||. .++ ++...+++|.+.+.+|+|+. .+++|
T Consensus 104 l~g~r~~vt~v~~hp~~--------~~v~~as~d~tikv~D~------~tg---~~e~~LrGHt~sv~di~~~a-~Gk~l 165 (406)
T KOG0295|consen 104 LAGHRSSVTRVIFHPSE--------ALVVSASEDATIKVFDT------ETG---ELERSLRGHTDSVFDISFDA-SGKYL 165 (406)
T ss_pred hhccccceeeeeeccCc--------eEEEEecCCceEEEEEc------cch---hhhhhhhccccceeEEEEec-CccEE
Confidence 34688899999999986 68889999999999999 666 78899999999999999998 78999
Q ss_pred EEEeCCCcEEEEcCCCC-CCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCC
Q 046451 140 ASGADDGEICIWDLSAP-AEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR 218 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~-~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~ 218 (719)
++++.|-.+++||+.+. ++.+ ...+|+..|.+++|-|.| .+|++++.|.+|+.||+.++.++.+|. +|..
T Consensus 166 ~tcSsDl~~~LWd~~~~~~c~k-------s~~gh~h~vS~V~f~P~g-d~ilS~srD~tik~We~~tg~cv~t~~-~h~e 236 (406)
T KOG0295|consen 166 ATCSSDLSAKLWDFDTFFRCIK-------SLIGHEHGVSSVFFLPLG-DHILSCSRDNTIKAWECDTGYCVKTFP-GHSE 236 (406)
T ss_pred EecCCccchhheeHHHHHHHHH-------HhcCcccceeeEEEEecC-CeeeecccccceeEEecccceeEEecc-CchH
Confidence 99999999999999874 2221 234577899999999997 699999999999999999999999999 8999
Q ss_pred ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCC--------------CCCCeEEEEe
Q 046451 219 RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCP--------------NDSSYLLTCA 284 (719)
Q Consensus 219 ~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp--------------~d~~~l~sgs 284 (719)
.+..++.+.|| .++++++.|. +|++|-+.+. .+...+.+|...|.+++|.| +.+.++++++
T Consensus 237 wvr~v~v~~DG-ti~As~s~dq---tl~vW~~~t~-~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~S 311 (406)
T KOG0295|consen 237 WVRMVRVNQDG-TIIASCSNDQ---TLRVWVVATK-QCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGS 311 (406)
T ss_pred hEEEEEecCCe-eEEEecCCCc---eEEEEEeccc-hhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeec
Confidence 99999999998 6899999998 9999999774 66778889999999999976 2345999999
Q ss_pred CCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccccc
Q 046451 285 KDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345 (719)
Q Consensus 285 ~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~ 345 (719)
.|++|++||+.++.++.++.+|.+||.+++|+|.| ++|+++.+|+++++||+.+++++..
T Consensus 312 rDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~G-kyi~ScaDDktlrvwdl~~~~cmk~ 371 (406)
T KOG0295|consen 312 RDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGG-KYILSCADDKTLRVWDLKNLQCMKT 371 (406)
T ss_pred ccceEEEEeccCCeEEEEEecccceeeeeEEcCCC-eEEEEEecCCcEEEEEeccceeeec
Confidence 99999999999999999999999999999999999 8999999999999999999998763
No 41
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.97 E-value=4.4e-30 Score=246.32 Aligned_cols=254 Identities=19% Similarity=0.304 Sum_probs=222.6
Q ss_pred ecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCC
Q 046451 58 VGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN 137 (719)
Q Consensus 58 ~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~ 137 (719)
....+|++.|+.+.|+|+| .+|++|+.|..|.||++. .+. +....+++|.++|..+.|.. |++
T Consensus 41 m~l~gh~geI~~~~F~P~g--------s~~aSgG~Dr~I~LWnv~-----gdc---eN~~~lkgHsgAVM~l~~~~-d~s 103 (338)
T KOG0265|consen 41 MLLPGHKGEIYTIKFHPDG--------SCFASGGSDRAIVLWNVY-----GDC---ENFWVLKGHSGAVMELHGMR-DGS 103 (338)
T ss_pred hhcCCCcceEEEEEECCCC--------CeEeecCCcceEEEEecc-----ccc---cceeeeccccceeEeeeecc-CCC
Confidence 4456899999999999998 799999999999999975 333 56677889999999999999 899
Q ss_pred EEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCC
Q 046451 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIK 217 (719)
Q Consensus 138 ~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~ 217 (719)
.|++++.|.+|+.||.++++..+.+ ..|...|+.+.-+.-|..++.+++.||++++||+|+...+.++. ..
T Consensus 104 ~i~S~gtDk~v~~wD~~tG~~~rk~-------k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~--~k 174 (338)
T KOG0265|consen 104 HILSCGTDKTVRGWDAETGKRIRKH-------KGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE--NK 174 (338)
T ss_pred EEEEecCCceEEEEecccceeeehh-------ccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc--cc
Confidence 9999999999999999999987663 45778899998777777889999999999999999999999887 78
Q ss_pred CceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC-
Q 046451 218 RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS- 296 (719)
Q Consensus 218 ~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~- 296 (719)
..++++.|..+++ .+++|+-|+ .|++||+++. ..+.++.||.+.|+.+..++ +|.++++-+.|+++++||++-
T Consensus 175 yqltAv~f~d~s~-qv~sggIdn---~ikvWd~r~~-d~~~~lsGh~DtIt~lsls~-~gs~llsnsMd~tvrvwd~rp~ 248 (338)
T KOG0265|consen 175 YQLTAVGFKDTSD-QVISGGIDN---DIKVWDLRKN-DGLYTLSGHADTITGLSLSR-YGSFLLSNSMDNTVRVWDVRPF 248 (338)
T ss_pred eeEEEEEeccccc-ceeeccccC---ceeeeccccC-cceEEeecccCceeeEEecc-CCCccccccccceEEEEEeccc
Confidence 8899999999885 688888887 8999999875 77899999999999999999 999999999999999999984
Q ss_pred ---CeEEEEecCCCC----CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 297 ---GEIVSELPAGTN----WNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 297 ---~~~~~~l~~h~~----~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
..++..+.+|.. ....++|+|++ ..+.+|+.|..+++||......+.
T Consensus 249 ~p~~R~v~if~g~~hnfeknlL~cswsp~~-~~i~ags~dr~vyvwd~~~r~~ly 302 (338)
T KOG0265|consen 249 APSQRCVKIFQGHIHNFEKNLLKCSWSPNG-TKITAGSADRFVYVWDTTSRRILY 302 (338)
T ss_pred CCCCceEEEeecchhhhhhhcceeeccCCC-CccccccccceEEEeecccccEEE
Confidence 345777776532 45678999999 799999999999999999876654
No 42
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=2.6e-30 Score=268.57 Aligned_cols=282 Identities=19% Similarity=0.317 Sum_probs=244.9
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.+.++|.+|.|+|...+++++-.+|.| .||+.++....+.+.+ .+..|.+..|-...
T Consensus 11 ~rSdRVKsVd~HPtePw~la~LynG~V----------~IWnyetqtmVksfeV-----~~~PvRa~kfiaRk-------- 67 (794)
T KOG0276|consen 11 SRSDRVKSVDFHPTEPWILAALYNGDV----------QIWNYETQTMVKSFEV-----SEVPVRAAKFIARK-------- 67 (794)
T ss_pred ccCCceeeeecCCCCceEEEeeecCee----------EEEecccceeeeeeee-----cccchhhheeeecc--------
Confidence 467899999999999999999888877 8899887655444433 45678888887765
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
+++++|+.|..|+||+. .+. +.++.+..|.+.|++|+.+| ..-+++++++|-+|++||.+..-.
T Consensus 68 nWiv~GsDD~~IrVfny------nt~---ekV~~FeAH~DyIR~iavHP-t~P~vLtsSDDm~iKlW~we~~wa------ 131 (794)
T KOG0276|consen 68 NWIVTGSDDMQIRVFNY------NTG---EKVKTFEAHSDYIRSIAVHP-TLPYVLTSSDDMTIKLWDWENEWA------ 131 (794)
T ss_pred ceEEEecCCceEEEEec------ccc---eeeEEeeccccceeeeeecC-CCCeEEecCCccEEEEeeccCcee------
Confidence 79999999999999999 666 88999999999999999999 678999999999999999986532
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCc-EEEEEeCCCCCC
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT-QLVVASDEDSSP 243 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~-~l~~~s~d~~~~ 243 (719)
......+|...|.+++|+|++.+.+++++-|++|+||.+.+..+..++. +|...|+|++|-+.|++ +|++|++|.
T Consensus 132 ~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~-gHekGVN~Vdyy~~gdkpylIsgaDD~--- 207 (794)
T KOG0276|consen 132 CEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLE-GHEKGVNCVDYYTGGDKPYLISGADDL--- 207 (794)
T ss_pred eeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeee-ccccCcceEEeccCCCcceEEecCCCc---
Confidence 2223356888999999999999999999999999999999999999999 99999999999887643 788888887
Q ss_pred cEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEE
Q 046451 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVI 323 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~l 323 (719)
+|+|||..+. .++.++.||...|..+.|+| .-.+|++|++||+++||+..+.+...++.-....|++++-...+ ..+
T Consensus 208 tiKvWDyQtk-~CV~TLeGHt~Nvs~v~fhp-~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~-~~i 284 (794)
T KOG0276|consen 208 TIKVWDYQTK-SCVQTLEGHTNNVSFVFFHP-ELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGD-GKI 284 (794)
T ss_pred eEEEeecchH-HHHHHhhcccccceEEEecC-CCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCC-CeE
Confidence 9999999874 89999999999999999999 88999999999999999999998888888778889999988877 567
Q ss_pred EEEeCCCcE
Q 046451 324 SASSFDGKI 332 (719)
Q Consensus 324 as~s~Dg~I 332 (719)
+.|.+.|.|
T Consensus 285 ~vG~Deg~i 293 (794)
T KOG0276|consen 285 AVGFDEGSV 293 (794)
T ss_pred EEeccCCcE
Confidence 777755544
No 43
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.97 E-value=5.4e-31 Score=267.23 Aligned_cols=286 Identities=16% Similarity=0.319 Sum_probs=243.4
Q ss_pred cccCccceEEEcC-CCCeEEEeeccceeecccCCCceEEEEEeec-cCCcccceeecccCCCCCceeeeecCCCCCCCCC
Q 046451 5 KGINRSASVAFAP-DAPYMAAGTMAGAVDLSFSSSANLEIFKLDF-QSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDF 82 (719)
Q Consensus 5 ~~~~~V~~vafSp-dg~~Latgs~dG~v~v~~s~~~~i~iwd~~~-~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~ 82 (719)
.|...|+++.|.| .+.+|++++.|+.| +||++-. +.+ +....+|...|.+++|+.+|
T Consensus 212 gH~kgvsai~~fp~~~hLlLS~gmD~~v----------klW~vy~~~~~-----lrtf~gH~k~Vrd~~~s~~g------ 270 (503)
T KOG0282|consen 212 GHTKGVSAIQWFPKKGHLLLSGGMDGLV----------KLWNVYDDRRC-----LRTFKGHRKPVRDASFNNCG------ 270 (503)
T ss_pred CCccccchhhhccceeeEEEecCCCceE----------EEEEEecCcce-----ehhhhcchhhhhhhhccccC------
Confidence 4667899999999 88999999998887 7788764 222 34457899999999999999
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCcc
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF 162 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~ 162 (719)
..+++++.|+.|++||+ ++| +++..+. ....++|+.|+|++.+.|++|+.|+.|+.||+++++.+..+
T Consensus 271 --~~fLS~sfD~~lKlwDt------ETG---~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeY 338 (503)
T KOG0282|consen 271 --TSFLSASFDRFLKLWDT------ETG---QVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEY 338 (503)
T ss_pred --Ceeeeeecceeeeeecc------ccc---eEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHH
Confidence 79999999999999999 667 7776665 34567899999976699999999999999999999876654
Q ss_pred CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCC
Q 046451 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSS 242 (719)
Q Consensus 163 ~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~ 242 (719)
..|-+.|..+.|-++| ..+++.++|+.++||+.+..-.+..+.........+|..+|++. .++.-+.|+
T Consensus 339 -------d~hLg~i~~i~F~~~g-~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~-~~~aQs~dN-- 407 (503)
T KOG0282|consen 339 -------DRHLGAILDITFVDEG-RRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGK-WFAAQSMDN-- 407 (503)
T ss_pred -------HhhhhheeeeEEccCC-ceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCC-eehhhccCc--
Confidence 3467799999999997 58999999999999999998877776656677788999999984 677777777
Q ss_pred CcEEEEecCCCC--CceEEeeCCC--CCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCC
Q 046451 243 PALRLWDMRNTM--SPVKEFVGHT--KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPK 318 (719)
Q Consensus 243 ~~I~lwDl~~~~--~~~~~~~~h~--~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spd 318 (719)
.|.+|.+.... ...+.+.+|. +.-..+.||| ||++|++|+.||.+.+||.++-+++..++.|...+..+.|+|.
T Consensus 408 -~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSp-DG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~ 485 (503)
T KOG0282|consen 408 -YIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSP-DGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPV 485 (503)
T ss_pred -eEEEEecccccccCHhhhhcceeccCceeeEEEcC-CCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCC
Confidence 89999875432 2345677775 3456789999 9999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEe
Q 046451 319 IPGVISASSFDGKIGIYN 336 (719)
Q Consensus 319 g~~~las~s~Dg~I~iwd 336 (719)
....+|||++||.|+||+
T Consensus 486 e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 486 EPSKVATCGWDGLIKIWD 503 (503)
T ss_pred CcceeEecccCceeEecC
Confidence 989999999999999996
No 44
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.97 E-value=1e-31 Score=261.06 Aligned_cols=235 Identities=18% Similarity=0.412 Sum_probs=206.6
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasg 142 (719)
....|+|+.+.. ..+++|..|++|+|||. .+. .+.+.+.+|++.|.|+.| +.+.|++|
T Consensus 196 ~skgVYClQYDD----------~kiVSGlrDnTikiWD~------n~~---~c~~~L~GHtGSVLCLqy---d~rviisG 253 (499)
T KOG0281|consen 196 NSKGVYCLQYDD----------EKIVSGLRDNTIKIWDK------NSL---ECLKILTGHTGSVLCLQY---DERVIVSG 253 (499)
T ss_pred cCCceEEEEecc----------hhhhcccccCceEEecc------ccH---HHHHhhhcCCCcEEeeec---cceEEEec
Confidence 567899999854 58999999999999998 444 788999999999999999 55799999
Q ss_pred eCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCcee---EEecCCCCCc
Q 046451 143 ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPV---ISFSESIKRR 219 (719)
Q Consensus 143 s~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~---~~~~~~~~~~ 219 (719)
+.|.+|+|||+++++.+.++ .+|.+.|..+.|+.. ++++++.|.++.+||+.....+ ..+. +|...
T Consensus 254 SSDsTvrvWDv~tge~l~tl-------ihHceaVLhlrf~ng---~mvtcSkDrsiaVWdm~sps~it~rrVLv-GHrAa 322 (499)
T KOG0281|consen 254 SSDSTVRVWDVNTGEPLNTL-------IHHCEAVLHLRFSNG---YMVTCSKDRSIAVWDMASPTDITLRRVLV-GHRAA 322 (499)
T ss_pred CCCceEEEEeccCCchhhHH-------hhhcceeEEEEEeCC---EEEEecCCceeEEEeccCchHHHHHHHHh-hhhhh
Confidence 99999999999999987663 357889999999753 8999999999999999876432 2233 89999
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI 299 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~ 299 (719)
|+.+.|+.. ++++++.|. +|++|++.+. +.++++.+|..+|.|+.+ .++++++|+.|++|++||+..|.+
T Consensus 323 VNvVdfd~k---yIVsASgDR---TikvW~~st~-efvRtl~gHkRGIAClQY---r~rlvVSGSSDntIRlwdi~~G~c 392 (499)
T KOG0281|consen 323 VNVVDFDDK---YIVSASGDR---TIKVWSTSTC-EFVRTLNGHKRGIACLQY---RDRLVVSGSSDNTIRLWDIECGAC 392 (499)
T ss_pred eeeeccccc---eEEEecCCc---eEEEEeccce-eeehhhhcccccceehhc---cCeEEEecCCCceEEEEeccccHH
Confidence 999999844 899999998 9999999775 789999999999999988 569999999999999999999999
Q ss_pred EEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 300 VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 300 ~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
+..+++|+.-|.++.|.. +.|++|+.||+|+|||+..+..-
T Consensus 393 LRvLeGHEeLvRciRFd~---krIVSGaYDGkikvWdl~aaldp 433 (499)
T KOG0281|consen 393 LRVLEGHEELVRCIRFDN---KRIVSGAYDGKIKVWDLQAALDP 433 (499)
T ss_pred HHHHhchHHhhhheeecC---ceeeeccccceEEEEecccccCC
Confidence 999999999999999985 46999999999999999987654
No 45
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.97 E-value=3.4e-30 Score=260.48 Aligned_cols=274 Identities=22% Similarity=0.388 Sum_probs=231.5
Q ss_pred ceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCC-CCCceeeeccccCCEEEEEEeC
Q 046451 55 LLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETG-GNPLIAHLSRHKGPVRGLEFNS 133 (719)
Q Consensus 55 ~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~-~~~~~~~l~~h~~~V~~l~fsp 133 (719)
+.....+.|.+.|+.+.+.|... .+|++++.++.|.|||..+........ ......++.+|.+.-++|+|++
T Consensus 115 v~i~~~i~h~gEVnRaRymPQnp-------~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~ 187 (422)
T KOG0264|consen 115 VEISQKINHDGEVNRARYMPQNP-------NIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNR 187 (422)
T ss_pred eEEEEeccCCccchhhhhCCCCC-------cEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeeccccccccccc
Confidence 33445567899999999998764 799999999999999986533211110 1134458889999889999999
Q ss_pred CCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC--CceeEE
Q 046451 134 FTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK--QKPVIS 211 (719)
Q Consensus 134 ~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~--~~~~~~ 211 (719)
....+|++++.|+.|++||+............+....+|.+.|..++|++....+|++++.|+.+.|||+|+ .+....
T Consensus 188 ~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~ 267 (422)
T KOG0264|consen 188 QQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHS 267 (422)
T ss_pred ccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCccc
Confidence 888899999999999999998766532222245556789999999999998888999999999999999995 444445
Q ss_pred ecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEE
Q 046451 212 FSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC 291 (719)
Q Consensus 212 ~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~i 291 (719)
.. .|...|.|++|+|.+..+|++++.|+ +|+|||+|+...++.++.+|...|.+|.|+|+....|++++.|+++.|
T Consensus 268 ~~-ah~~~vn~~~fnp~~~~ilAT~S~D~---tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~v 343 (422)
T KOG0264|consen 268 VK-AHSAEVNCVAFNPFNEFILATGSADK---TVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNV 343 (422)
T ss_pred cc-ccCCceeEEEeCCCCCceEEeccCCC---cEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEE
Confidence 54 89999999999999999999999998 999999999999999999999999999999988899999999999999
Q ss_pred EECCCC--------------eEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 292 WDTVSG--------------EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 292 wd~~~~--------------~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
||+..- ++++.-.||...|.++.|+|+.+..|++.++|+.+.||+...
T Consensus 344 WDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 344 WDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred EeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 999641 345666789999999999999999999999999999999874
No 46
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=3.5e-29 Score=275.80 Aligned_cols=287 Identities=23% Similarity=0.333 Sum_probs=233.6
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasg 142 (719)
+...|.++.|+++| +.|++++.|+.+++|+... ... .....+.+|...|.+++|++ ++++++++
T Consensus 158 ~~~sv~~~~fs~~g--------~~l~~~~~~~~i~~~~~~~------~~~-~~~~~l~~h~~~v~~~~fs~-d~~~l~s~ 221 (456)
T KOG0266|consen 158 ECPSVTCVDFSPDG--------RALAAASSDGLIRIWKLEG------IKS-NLLRELSGHTRGVSDVAFSP-DGSYLLSG 221 (456)
T ss_pred ccCceEEEEEcCCC--------CeEEEccCCCcEEEeeccc------ccc-hhhccccccccceeeeEECC-CCcEEEEe
Confidence 47889999999999 6899999999999999832 200 25666789999999999999 88999999
Q ss_pred eCCCcEEEEcCCCC-CCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCcee
Q 046451 143 ADDGEICIWDLSAP-AEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCS 221 (719)
Q Consensus 143 s~dg~I~iwdl~~~-~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~ 221 (719)
+.|++|+|||+... ...+. ..+|...|++++|++++ +++++|+.|++|+|||+++++++..+. .|...|+
T Consensus 222 s~D~tiriwd~~~~~~~~~~-------l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd~~~~~~~~~l~-~hs~~is 292 (456)
T KOG0266|consen 222 SDDKTLRIWDLKDDGRNLKT-------LKGHSTYVTSVAFSPDG-NLLVSGSDDGTVRIWDVRTGECVRKLK-GHSDGIS 292 (456)
T ss_pred cCCceEEEeeccCCCeEEEE-------ecCCCCceEEEEecCCC-CEEEEecCCCcEEEEeccCCeEEEeee-ccCCceE
Confidence 99999999999443 44333 24688999999999998 799999999999999999999999999 8999999
Q ss_pred EEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC-ceEEeeCCCCC--eeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 222 VLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS-PVKEFVGHTKG--VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 222 ~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~-~~~~~~~h~~~--V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
+++|++++ .+|++++.|+ .|+|||+.++.. ++..+.++... +++++|++ ++.+|++++.|+.+++||+..++
T Consensus 293 ~~~f~~d~-~~l~s~s~d~---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp-~~~~ll~~~~d~~~~~w~l~~~~ 367 (456)
T KOG0266|consen 293 GLAFSPDG-NLLVSASYDG---TIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSP-NGKYLLSASLDRTLKLWDLRSGK 367 (456)
T ss_pred EEEECCCC-CEEEEcCCCc---cEEEEECCCCceeeeecccCCCCCCceeEEEECC-CCcEEEEecCCCeEEEEEccCCc
Confidence 99999998 5788888887 999999988643 35677776665 99999999 99999999999999999999999
Q ss_pred EEEEecCCCCC---eEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCc---eeeeeC
Q 046451 299 IVSELPAGTNW---NFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAG---ASFGFG 372 (719)
Q Consensus 299 ~~~~l~~h~~~---v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~---~s~s~~ 372 (719)
.+..+.+|... +++...+..+ .++++|+.|+.|++||+.++..+...+..- ...+....|...... .++..|
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~-~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~-~~~~~~~~~~~~~~~~~s~s~~~d 445 (456)
T KOG0266|consen 368 SVGTYTGHSNLVRCIFSPTLSTGG-KLIYSGSEDGSVYVWDSSSGGILQRLEGHS-KAAVSDLSSHPTENLIASSSFEGD 445 (456)
T ss_pred ceeeecccCCcceeEecccccCCC-CeEEEEeCCceEEEEeCCccchhhhhcCCC-CCceeccccCCCcCeeeecCcCCC
Confidence 99999998874 3444556677 799999999999999999987776554441 222234445444322 233357
Q ss_pred CcEEEEccC
Q 046451 373 GKLVSFHPK 381 (719)
Q Consensus 373 Gklv~~~~~ 381 (719)
+++..|..+
T Consensus 446 ~~~~~w~~~ 454 (456)
T KOG0266|consen 446 GLIRLWKYD 454 (456)
T ss_pred ceEEEecCC
Confidence 777777543
No 47
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.97 E-value=4.2e-29 Score=245.39 Aligned_cols=314 Identities=18% Similarity=0.277 Sum_probs=269.7
Q ss_pred eecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCC
Q 046451 57 LVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTP 136 (719)
Q Consensus 57 ~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~ 136 (719)
+.....|...|++++.+|+. +++++|+.|..-.||++ .++ .....+.+|++.|+++.|+. ++
T Consensus 57 ~~tF~~H~~svFavsl~P~~--------~l~aTGGgDD~AflW~~------~~g---e~~~eltgHKDSVt~~~Fsh-dg 118 (399)
T KOG0296|consen 57 LVTFDKHTDSVFAVSLHPNN--------NLVATGGGDDLAFLWDI------STG---EFAGELTGHKDSVTCCSFSH-DG 118 (399)
T ss_pred eeehhhcCCceEEEEeCCCC--------ceEEecCCCceEEEEEc------cCC---cceeEecCCCCceEEEEEcc-Cc
Confidence 35557799999999999976 79999999999999999 667 78899999999999999999 89
Q ss_pred CEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCC
Q 046451 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESI 216 (719)
Q Consensus 137 ~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~ 216 (719)
.+||+|+.+|.|+||+..++.....+ . ..-+.|.-+.|+|.+ ++|+.|+.||.+.+|.+.++.....+. +|
T Consensus 119 tlLATGdmsG~v~v~~~stg~~~~~~--~-----~e~~dieWl~WHp~a-~illAG~~DGsvWmw~ip~~~~~kv~~-Gh 189 (399)
T KOG0296|consen 119 TLLATGDMSGKVLVFKVSTGGEQWKL--D-----QEVEDIEWLKWHPRA-HILLAGSTDGSVWMWQIPSQALCKVMS-GH 189 (399)
T ss_pred eEEEecCCCccEEEEEcccCceEEEe--e-----cccCceEEEEecccc-cEEEeecCCCcEEEEECCCcceeeEec-CC
Confidence 99999999999999999998866553 1 123478899999986 799999999999999999987777777 89
Q ss_pred CCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC-CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 217 KRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG-HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 217 ~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~-h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
...+++=.|.|+| +.++++..|+ +|++||++++ .++..+.. ......++.++. .+..++.|+.++.+++-+..
T Consensus 190 ~~~ct~G~f~pdG-Kr~~tgy~dg---ti~~Wn~ktg-~p~~~~~~~e~~~~~~~~~~~-~~~~~~~g~~e~~~~~~~~~ 263 (399)
T KOG0296|consen 190 NSPCTCGEFIPDG-KRILTGYDDG---TIIVWNPKTG-QPLHKITQAEGLELPCISLNL-AGSTLTKGNSEGVACGVNNG 263 (399)
T ss_pred CCCcccccccCCC-ceEEEEecCc---eEEEEecCCC-ceeEEecccccCcCCcccccc-ccceeEeccCCccEEEEccc
Confidence 9999999999998 4789999988 9999999886 56665542 234667888888 88999999999999999999
Q ss_pred CCeEEEEecC--------CCC---CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCC
Q 046451 296 SGEIVSELPA--------GTN---WNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRP 364 (719)
Q Consensus 296 ~~~~~~~l~~--------h~~---~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~ 364 (719)
+|+.+..+.+ +.. .|..+.|+..- .+.|+|+-||+|.|||+...++....++...+ ...+|.+..
T Consensus 264 sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~l-pL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V---~~l~w~~t~ 339 (399)
T KOG0296|consen 264 SGKVVNCNNGTVPELKPSQEELDESVESIPSSSKL-PLAACGSVDGTIAIYDLAASTLRHICEHEDGV---TKLKWLNTD 339 (399)
T ss_pred cceEEEecCCCCccccccchhhhhhhhhccccccc-chhhcccccceEEEEecccchhheeccCCCce---EEEEEcCcc
Confidence 9998887762 333 34455556565 58899999999999999999998888888664 466799988
Q ss_pred CceeeeeCCcEEEEccCCCCCccccccccccceeeccCCCCCC
Q 046451 365 AGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGMV 407 (719)
Q Consensus 365 ~~~s~s~~Gklv~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~ 407 (719)
..++...+|++..|+.+.+.++-+..||...|+.+++++|...
T Consensus 340 ~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~ 382 (399)
T KOG0296|consen 340 YLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRL 382 (399)
T ss_pred hheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcE
Confidence 8899999999999999999999999999999999999988654
No 48
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=2.2e-29 Score=261.63 Aligned_cols=251 Identities=21% Similarity=0.379 Sum_probs=227.5
Q ss_pred CCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEE
Q 046451 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLAS 141 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~las 141 (719)
.++.+|.++.|+|.. -+++++-.+|.|.|||. .+. ..++.+.....+|+...|-. ..+.+++
T Consensus 11 ~rSdRVKsVd~HPte--------Pw~la~LynG~V~IWny------etq---tmVksfeV~~~PvRa~kfia-RknWiv~ 72 (794)
T KOG0276|consen 11 SRSDRVKSVDFHPTE--------PWILAALYNGDVQIWNY------ETQ---TMVKSFEVSEVPVRAAKFIA-RKNWIVT 72 (794)
T ss_pred ccCCceeeeecCCCC--------ceEEEeeecCeeEEEec------ccc---eeeeeeeecccchhhheeee-ccceEEE
Confidence 478999999999997 59999999999999999 444 77888888889999999988 7899999
Q ss_pred EeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC-ceeEEecCCCCCce
Q 046451 142 GADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ-KPVISFSESIKRRC 220 (719)
Q Consensus 142 gs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~-~~~~~~~~~~~~~i 220 (719)
|++|..|+||+.++.+.+..| ..|.+.|++++.+|.. .+++++++|-+|++||.+.+ .+..+|. +|..-|
T Consensus 73 GsDD~~IrVfnynt~ekV~~F-------eAH~DyIR~iavHPt~-P~vLtsSDDm~iKlW~we~~wa~~qtfe-GH~HyV 143 (794)
T KOG0276|consen 73 GSDDMQIRVFNYNTGEKVKTF-------EAHSDYIRSIAVHPTL-PYVLTSSDDMTIKLWDWENEWACEQTFE-GHEHYV 143 (794)
T ss_pred ecCCceEEEEecccceeeEEe-------eccccceeeeeecCCC-CeEEecCCccEEEEeeccCceeeeeEEc-CcceEE
Confidence 999999999999999988774 4689999999999996 59999999999999999876 4566676 999999
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCC-CCCeEEEEeCCCcEEEEECCCCeE
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPN-DSSYLLTCAKDNRTICWDTVSGEI 299 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~-d~~~l~sgs~Dg~I~iwd~~~~~~ 299 (719)
.+++|+|.....|++++-|+ +|++|.+... .+..++.+|..+|+|++|-+. |.-+|++|++|..|+|||..+..+
T Consensus 144 Mqv~fnPkD~ntFaS~sLDr---TVKVWslgs~-~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~C 219 (794)
T KOG0276|consen 144 MQVAFNPKDPNTFASASLDR---TVKVWSLGSP-HPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSC 219 (794)
T ss_pred EEEEecCCCccceeeeeccc---cEEEEEcCCC-CCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHH
Confidence 99999999889999999999 9999999764 778999999999999999871 234999999999999999999999
Q ss_pred EEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 300 VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 300 ~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+.++++|...|..+.|+|.- -+|++|++||+++||+-.+-++..
T Consensus 220 V~TLeGHt~Nvs~v~fhp~l-piiisgsEDGTvriWhs~Ty~lE~ 263 (794)
T KOG0276|consen 220 VQTLEGHTNNVSFVFFHPEL-PIIISGSEDGTVRIWNSKTYKLEK 263 (794)
T ss_pred HHHhhcccccceEEEecCCC-cEEEEecCCccEEEecCcceehhh
Confidence 99999999999999999998 699999999999999999887755
No 49
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.97 E-value=6.9e-30 Score=238.58 Aligned_cols=291 Identities=18% Similarity=0.292 Sum_probs=239.5
Q ss_pred ccccccCccceEEEcC---CCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCC
Q 046451 2 ACIKGINRSASVAFAP---DAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSG 78 (719)
Q Consensus 2 ~~l~~~~~V~~vafSp---dg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~ 78 (719)
+|-.|...|-.++||| ||-+|++++.||.-. +-+-+++.-. -...+|++.|++...+.+.
T Consensus 9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pm----------lr~g~tgdwi-----gtfeghkgavw~~~l~~na-- 71 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPM----------LRNGDTGDWI-----GTFEGHKGAVWSATLNKNA-- 71 (334)
T ss_pred EEcCCCcceeEEeccCCCCCceEEEEeccCCCch----------hccCCCCCcE-----EeeeccCcceeeeecCchh--
Confidence 3556778899999986 888999999888652 2222222221 2335799999999998886
Q ss_pred CCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC
Q 046451 79 SEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE 158 (719)
Q Consensus 79 ~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~ 158 (719)
.+.++++.|-+.+|||. .++ ..+..+. |+..|..++|+. |.++|++|+.+..++|||++..+.
T Consensus 72 ------~~aasaaadftakvw~a------~tg---delhsf~-hkhivk~~af~~-ds~~lltgg~ekllrvfdln~p~A 134 (334)
T KOG0278|consen 72 ------TRAASAAADFTAKVWDA------VTG---DELHSFE-HKHIVKAVAFSQ-DSNYLLTGGQEKLLRVFDLNRPKA 134 (334)
T ss_pred ------hhhhhhcccchhhhhhh------hhh---hhhhhhh-hhheeeeEEecc-cchhhhccchHHHhhhhhccCCCC
Confidence 68889999999999998 556 5666665 888999999999 889999999999999999988765
Q ss_pred CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeC
Q 046451 159 PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASD 238 (719)
Q Consensus 159 ~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~ 238 (719)
.- ....+|.+.|..+.|...+ +.|+++.+|++|++||.++++.+.++. ....|+++.++.+|+ +++-..
T Consensus 135 pp------~E~~ghtg~Ir~v~wc~eD-~~iLSSadd~tVRLWD~rTgt~v~sL~--~~s~VtSlEvs~dG~--ilTia~ 203 (334)
T KOG0278|consen 135 PP------KEISGHTGGIRTVLWCHED-KCILSSADDKTVRLWDHRTGTEVQSLE--FNSPVTSLEVSQDGR--ILTIAY 203 (334)
T ss_pred Cc------hhhcCCCCcceeEEEeccC-ceEEeeccCCceEEEEeccCcEEEEEe--cCCCCcceeeccCCC--EEEEec
Confidence 32 2245688899999998885 578888999999999999999999998 888999999999984 444444
Q ss_pred CCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEe-cCCCCCeEEeEEcC
Q 046451 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSEL-PAGTNWNFDIHWYP 317 (719)
Q Consensus 239 d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l-~~h~~~v~~l~~sp 317 (719)
.+ .|.+||..+. ..++.+. -...|.+..++| +..++++|++|..++.||+.+|+.+..+ ++|.+.|.++.|+|
T Consensus 204 gs---sV~Fwdaksf-~~lKs~k-~P~nV~SASL~P-~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSP 277 (334)
T KOG0278|consen 204 GS---SVKFWDAKSF-GLLKSYK-MPCNVESASLHP-KKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSP 277 (334)
T ss_pred Cc---eeEEeccccc-cceeecc-CccccccccccC-CCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECC
Confidence 44 7999999764 5555554 345788999999 7799999999999999999999999886 89999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 318 KIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 318 dg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
|| .+.++||+||+|+||...-++...
T Consensus 278 dG-E~yAsGSEDGTirlWQt~~~~~~~ 303 (334)
T KOG0278|consen 278 DG-ELYASGSEDGTIRLWQTTPGKTYG 303 (334)
T ss_pred CC-ceeeccCCCceEEEEEecCCCchh
Confidence 99 799999999999999998877653
No 50
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=4.4e-29 Score=264.57 Aligned_cols=296 Identities=17% Similarity=0.274 Sum_probs=253.2
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
..|-+.|.+++||.|...+++|+ ++.++||+.++..+.+++ ..+.+.+..|.|.+
T Consensus 370 ~GHR~dVRsl~vS~d~~~~~Sga-----------~~SikiWn~~t~kciRTi-------~~~y~l~~~Fvpgd------- 424 (888)
T KOG0306|consen 370 GGHRSDVRSLCVSSDSILLASGA-----------GESIKIWNRDTLKCIRTI-------TCGYILASKFVPGD------- 424 (888)
T ss_pred ccchhheeEEEeecCceeeeecC-----------CCcEEEEEccCcceeEEe-------ccccEEEEEecCCC-------
Confidence 45678899999999999998884 456699999987776655 23478899999987
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC-----
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE----- 158 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~----- 158 (719)
+++++|...|.+.+||+ .+. ..+.++..|.+.|++++.++ |+..+++|+.|.+|++||+.-...
T Consensus 425 -~~Iv~G~k~Gel~vfdl------aS~---~l~Eti~AHdgaIWsi~~~p-D~~g~vT~saDktVkfWdf~l~~~~~gt~ 493 (888)
T KOG0306|consen 425 -RYIVLGTKNGELQVFDL------ASA---SLVETIRAHDGAIWSISLSP-DNKGFVTGSADKTVKFWDFKLVVSVPGTQ 493 (888)
T ss_pred -ceEEEeccCCceEEEEe------ehh---hhhhhhhccccceeeeeecC-CCCceEEecCCcEEEEEeEEEEeccCccc
Confidence 79999999999999999 555 67777889999999999999 889999999999999999752211
Q ss_pred CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeC
Q 046451 159 PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASD 238 (719)
Q Consensus 159 ~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~ 238 (719)
.+.+.......-...+.|.|+.++|+| .+|+++--|.+|+||-+.+-+...++. +|.-+|.|+..++|+ .++++|+.
T Consensus 494 ~k~lsl~~~rtLel~ddvL~v~~Spdg-k~LaVsLLdnTVkVyflDtlKFflsLY-GHkLPV~smDIS~DS-klivTgSA 570 (888)
T KOG0306|consen 494 KKVLSLKHTRTLELEDDVLCVSVSPDG-KLLAVSLLDNTVKVYFLDTLKFFLSLY-GHKLPVLSMDISPDS-KLIVTGSA 570 (888)
T ss_pred ceeeeeccceEEeccccEEEEEEcCCC-cEEEEEeccCeEEEEEecceeeeeeec-ccccceeEEeccCCc-CeEEeccC
Confidence 111110111112245689999999997 699999999999999999999888888 899999999999998 68999999
Q ss_pred CCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCC
Q 046451 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPK 318 (719)
Q Consensus 239 d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spd 318 (719)
|. +|++|-+.-+ .+-+.+-+|.+.|.++.|.| ...++++||.|+.|+-||-...+.+..+.+|...|++++.+++
T Consensus 571 DK---nVKiWGLdFG-DCHKS~fAHdDSvm~V~F~P-~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~ 645 (888)
T KOG0306|consen 571 DK---NVKIWGLDFG-DCHKSFFAHDDSVMSVQFLP-KTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPN 645 (888)
T ss_pred CC---ceEEeccccc-hhhhhhhcccCceeEEEEcc-cceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCC
Confidence 99 8999998654 78889999999999999999 8899999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 319 IPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 319 g~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
| .+++++|.|.+|++|......++.
T Consensus 646 G-~~vvs~shD~sIRlwE~tde~~~l 670 (888)
T KOG0306|consen 646 G-SFVVSSSHDKSIRLWERTDEILIL 670 (888)
T ss_pred C-CeEEeccCCceeEeeeccCcceee
Confidence 9 899999999999999987755544
No 51
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=4.9e-29 Score=253.56 Aligned_cols=288 Identities=20% Similarity=0.328 Sum_probs=242.2
Q ss_pred ccccCccceEEEcCCCCe-EEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCC
Q 046451 4 IKGINRSASVAFAPDAPY-MAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDF 82 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~-Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~ 82 (719)
.++.+.|++++|||...+ +|+.+ +..+.||+.......+.+ ......|.+++|..||
T Consensus 23 ~ke~~~vssl~fsp~~P~d~aVt~-----------S~rvqly~~~~~~~~k~~-----srFk~~v~s~~fR~DG------ 80 (487)
T KOG0310|consen 23 HKEHNSVSSLCFSPKHPYDFAVTS-----------SVRVQLYSSVTRSVRKTF-----SRFKDVVYSVDFRSDG------ 80 (487)
T ss_pred ccccCcceeEecCCCCCCceEEec-----------ccEEEEEecchhhhhhhH-----HhhccceeEEEeecCC------
Confidence 467899999999997643 44442 234478887755443332 3467889999999999
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCcc
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF 162 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~ 162 (719)
.+||+|...|.|+|||+ .+. ..+..+..|+.+|..+.|++.++..|++|++|+.+++||+.+....
T Consensus 81 --~LlaaGD~sG~V~vfD~------k~r---~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~--- 146 (487)
T KOG0310|consen 81 --RLLAAGDESGHVKVFDM------KSR---VILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQ--- 146 (487)
T ss_pred --eEEEccCCcCcEEEecc------ccH---HHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEE---
Confidence 79999999999999997 333 5778899999999999999988999999999999999999987732
Q ss_pred CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC-ceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCC
Q 046451 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ-KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241 (719)
Q Consensus 163 ~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~ 241 (719)
....+|++.|.|.+|++...+++++|+.||+|++||++.. ..+.++. |..+|..+.+-|.| .+|++++..
T Consensus 147 ----~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln--hg~pVe~vl~lpsg-s~iasAgGn-- 217 (487)
T KOG0310|consen 147 ----AELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN--HGCPVESVLALPSG-SLIASAGGN-- 217 (487)
T ss_pred ----EEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec--CCCceeeEEEcCCC-CEEEEcCCC--
Confidence 1235699999999999988889999999999999999987 6777777 99999999999998 478887776
Q ss_pred CCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCC
Q 046451 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPG 321 (719)
Q Consensus 242 ~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~ 321 (719)
.|++||+-++.+.+..+..|...|+|+++.. ++..|++++-|+.|++||+.+.+.+..+... +.|.+++.++++ .
T Consensus 218 --~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s-~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~-~pvLsiavs~dd-~ 292 (487)
T KOG0310|consen 218 --SVKVWDLTTGGQLLTSMFNHNKTVTCLRLAS-DSTRLLSGSLDRHVKVFDTTNYKVVHSWKYP-GPVLSIAVSPDD-Q 292 (487)
T ss_pred --eEEEEEecCCceehhhhhcccceEEEEEeec-CCceEeecccccceEEEEccceEEEEeeecc-cceeeEEecCCC-c
Confidence 5999999878777777777999999999998 8899999999999999999999999988654 569999999998 7
Q ss_pred EEEEEeCCCcEEEEeCCCCc
Q 046451 322 VISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 322 ~las~s~Dg~I~iwd~~~~~ 341 (719)
.++.|..||.+.+-+....+
T Consensus 293 t~viGmsnGlv~~rr~~~k~ 312 (487)
T KOG0310|consen 293 TVVIGMSNGLVSIRRREVKK 312 (487)
T ss_pred eEEEecccceeeeehhhccc
Confidence 88999999988887554443
No 52
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=4.9e-28 Score=229.20 Aligned_cols=284 Identities=18% Similarity=0.330 Sum_probs=223.0
Q ss_pred ccCCCCCceeeeecCC-CCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeee-ccccCCEEEEEEeCCCCC
Q 046451 60 ESPSSERFNRLAWGKN-GSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL-SRHKGPVRGLEFNSFTPN 137 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~-g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l-~~h~~~V~~l~fsp~~~~ 137 (719)
..+|.+++..++|+|- | .+||+|+.|..|++|+.. ++....+...+ .+|+..|++++|+| .++
T Consensus 10 ~~gh~~r~W~~awhp~~g--------~ilAscg~Dk~vriw~~~------~~~s~~ck~vld~~hkrsVRsvAwsp-~g~ 74 (312)
T KOG0645|consen 10 LSGHKDRVWSVAWHPGKG--------VILASCGTDKAVRIWSTS------SGDSWTCKTVLDDGHKRSVRSVAWSP-HGR 74 (312)
T ss_pred ecCCCCcEEEEEeccCCc--------eEEEeecCCceEEEEecC------CCCcEEEEEeccccchheeeeeeecC-CCc
Confidence 3568889999999997 5 689999999999999983 22223444444 36999999999999 789
Q ss_pred EEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC---ceeEEecC
Q 046451 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSE 214 (719)
Q Consensus 138 ~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~---~~~~~~~~ 214 (719)
+|++++.|.++.||.-..++.. ......+|+.+|.|++|+.+| ++||+|+.|+.|-||.+... +++..+.
T Consensus 75 ~La~aSFD~t~~Iw~k~~~efe-----cv~~lEGHEnEVK~Vaws~sG-~~LATCSRDKSVWiWe~deddEfec~aVL~- 147 (312)
T KOG0645|consen 75 YLASASFDATVVIWKKEDGEFE-----CVATLEGHENEVKCVAWSASG-NYLATCSRDKSVWIWEIDEDDEFECIAVLQ- 147 (312)
T ss_pred EEEEeeccceEEEeecCCCcee-----EEeeeeccccceeEEEEcCCC-CEEEEeeCCCeEEEEEecCCCcEEEEeeec-
Confidence 9999999999999986644322 223345799999999999998 69999999999999999854 4556666
Q ss_pred CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecC--CCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEE
Q 046451 215 SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR--NTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292 (719)
Q Consensus 215 ~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~--~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iw 292 (719)
.|...|..+.|+|.. .+|++++.|+ +|++|+-. ....++.++.+|...|.+++|++ .|..|++++.|++|+||
T Consensus 148 ~HtqDVK~V~WHPt~-dlL~S~SYDn---TIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~-~G~rl~s~sdD~tv~Iw 222 (312)
T KOG0645|consen 148 EHTQDVKHVIWHPTE-DLLFSCSYDN---TIKVYRDEDDDDWECVQTLDGHENTVWSLAFDN-IGSRLVSCSDDGTVSIW 222 (312)
T ss_pred cccccccEEEEcCCc-ceeEEeccCC---eEEEEeecCCCCeeEEEEecCccceEEEEEecC-CCceEEEecCCcceEee
Confidence 899999999999986 5899999998 99999865 23467889999999999999999 88999999999999999
Q ss_pred ECCCCeEEEEe-cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCc------ccccCCCCCCCCCccCcceec--C
Q 046451 293 DTVSGEIVSEL-PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS------RYGVGDSNFSAAPLRAPKWYK--R 363 (719)
Q Consensus 293 d~~~~~~~~~l-~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~------~~~~~~~~~~~~~~~~p~w~~--~ 363 (719)
...+ .+ ..|...++.+.|. ++ +|++++.|+.|++|.....- ++...+.... ..++..+|.+ +
T Consensus 223 ~~~~-----~~~~~~sr~~Y~v~W~-~~--~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe-~dVNsV~w~p~~~ 293 (312)
T KOG0645|consen 223 RLYT-----DLSGMHSRALYDVPWD-NG--VIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHE-VDVNSVQWNPKVS 293 (312)
T ss_pred eecc-----CcchhcccceEeeeec-cc--ceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccc-cccceEEEcCCCC
Confidence 8652 22 2467789999999 54 99999999999999987531 1111111111 1346778887 3
Q ss_pred CCceeeeeCCcEEEEc
Q 046451 364 PAGASFGFGGKLVSFH 379 (719)
Q Consensus 364 ~~~~s~s~~Gklv~~~ 379 (719)
...++.+-||.+..|.
T Consensus 294 ~~L~s~~DDG~v~~W~ 309 (312)
T KOG0645|consen 294 NRLASGGDDGIVNFWE 309 (312)
T ss_pred CceeecCCCceEEEEE
Confidence 4556666677666554
No 53
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=4.2e-28 Score=286.70 Aligned_cols=255 Identities=20% Similarity=0.310 Sum_probs=210.8
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCC-CCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGG-NPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~-~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
..|...|++++|++++ ++|++|+.|+.|+|||+..... ++.. ......+. +...|.+++|++.++++|
T Consensus 480 ~~~~~~V~~i~fs~dg--------~~latgg~D~~I~iwd~~~~~~--~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~l 548 (793)
T PLN00181 480 LNSSNLVCAIGFDRDG--------EFFATAGVNKKIKIFECESIIK--DGRDIHYPVVELA-SRSKLSGICWNSYIKSQV 548 (793)
T ss_pred cCCCCcEEEEEECCCC--------CEEEEEeCCCEEEEEECCcccc--cccccccceEEec-ccCceeeEEeccCCCCEE
Confidence 4588999999999998 7999999999999999753211 1100 01222333 356899999998678899
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR 219 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~ 219 (719)
++++.||+|+|||+.+.+.... ...|.+.|++++|++.+..+|++|+.||+|++||++++..+..+. +...
T Consensus 549 as~~~Dg~v~lWd~~~~~~~~~-------~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~--~~~~ 619 (793)
T PLN00181 549 ASSNFEGVVQVWDVARSQLVTE-------MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK--TKAN 619 (793)
T ss_pred EEEeCCCeEEEEECCCCeEEEE-------ecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEe--cCCC
Confidence 9999999999999988765433 245788999999997545799999999999999999999888887 4467
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC---
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS--- 296 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~--- 296 (719)
+.++.|+++...+|++|+.|+ .|++||+++....+..+.+|...|.++.|. ++.+|++++.|+.|+|||+..
T Consensus 620 v~~v~~~~~~g~~latgs~dg---~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~--~~~~lvs~s~D~~ikiWd~~~~~~ 694 (793)
T PLN00181 620 ICCVQFPSESGRSLAFGSADH---KVYYYDLRNPKLPLCTMIGHSKTVSYVRFV--DSSTLVSSSTDNTLKLWDLSMSIS 694 (793)
T ss_pred eEEEEEeCCCCCEEEEEeCCC---eEEEEECCCCCccceEecCCCCCEEEEEEe--CCCEEEEEECCCEEEEEeCCCCcc
Confidence 899999665447899999998 999999987655677888999999999996 578999999999999999974
Q ss_pred ---CeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 297 ---GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 297 ---~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
.+.+..+.+|...+..++|++++ .+|++|+.|+.|+||+.....
T Consensus 695 ~~~~~~l~~~~gh~~~i~~v~~s~~~-~~lasgs~D~~v~iw~~~~~~ 741 (793)
T PLN00181 695 GINETPLHSFMGHTNVKNFVGLSVSD-GYIATGSETNEVFVYHKAFPM 741 (793)
T ss_pred ccCCcceEEEcCCCCCeeEEEEcCCC-CEEEEEeCCCEEEEEECCCCC
Confidence 35788899999999999999998 799999999999999987654
No 54
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.97 E-value=1.6e-27 Score=245.24 Aligned_cols=250 Identities=26% Similarity=0.453 Sum_probs=215.8
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
.+|...|++++|++++ ++|++++.||.|++|++ .++ .....+..|...+..+.|++ ++++|+
T Consensus 6 ~~h~~~i~~~~~~~~~--------~~l~~~~~~g~i~i~~~------~~~---~~~~~~~~~~~~i~~~~~~~-~~~~l~ 67 (289)
T cd00200 6 KGHTGGVTCVAFSPDG--------KLLATGSGDGTIKVWDL------ETG---ELLRTLKGHTGPVRDVAASA-DGTYLA 67 (289)
T ss_pred cccCCCEEEEEEcCCC--------CEEEEeecCcEEEEEEe------eCC---CcEEEEecCCcceeEEEECC-CCCEEE
Confidence 3588999999999997 79999999999999998 344 56777888999999999999 678999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
+++.||.|++||+.+.+....+ ..|...|.++.|++++ .++++++.||.|++||+++++....+. .+...+
T Consensus 68 ~~~~~~~i~i~~~~~~~~~~~~-------~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~i 138 (289)
T cd00200 68 SGSSDKTIRLWDLETGECVRTL-------TGHTSYVSSVAFSPDG-RILSSSSRDKTIKVWDVETGKCLTTLR-GHTDWV 138 (289)
T ss_pred EEcCCCeEEEEEcCcccceEEE-------eccCCcEEEEEEcCCC-CEEEEecCCCeEEEEECCCcEEEEEec-cCCCcE
Confidence 9999999999999986554432 2466689999999985 588888889999999999888888887 788899
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEE
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV 300 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~ 300 (719)
.+++|++++ .++++++.++ .|++||+++. +.+..+..|...|.+++|++ +++.|++++.|+.|++||+++++.+
T Consensus 139 ~~~~~~~~~-~~l~~~~~~~---~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~i~d~~~~~~~ 212 (289)
T cd00200 139 NSVAFSPDG-TFVASSSQDG---TIKLWDLRTG-KCVATLTGHTGEVNSVAFSP-DGEKLLSSSSDGTIKLWDLSTGKCL 212 (289)
T ss_pred EEEEEcCcC-CEEEEEcCCC---cEEEEEcccc-ccceeEecCccccceEEECC-CcCEEEEecCCCcEEEEECCCCcee
Confidence 999999995 5666666576 8999999864 56777888988999999999 8888999999999999999999999
Q ss_pred EEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 301 SELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 301 ~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
..+..|...+.++.|++++ .++++++.||.|++||+.+++...
T Consensus 213 ~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~i~~~~~~~~~~ 255 (289)
T cd00200 213 GTLRGHENGVNSVAFSPDG-YLLASGSEDGTIRVWDLRTGECVQ 255 (289)
T ss_pred cchhhcCCceEEEEEcCCC-cEEEEEcCCCcEEEEEcCCceeEE
Confidence 9998898899999999996 788888889999999999876654
No 55
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.5e-28 Score=264.11 Aligned_cols=288 Identities=18% Similarity=0.324 Sum_probs=244.9
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
...||..++|+|...+|.++-.+|.| ++||+.-+....+ ..+|++.|..++|++.. -
T Consensus 8 kSsRvKglsFHP~rPwILtslHsG~I----------QlWDYRM~tli~r-----FdeHdGpVRgv~FH~~q--------p 64 (1202)
T KOG0292|consen 8 KSSRVKGLSFHPKRPWILTSLHSGVI----------QLWDYRMGTLIDR-----FDEHDGPVRGVDFHPTQ--------P 64 (1202)
T ss_pred ccccccceecCCCCCEEEEeecCcee----------eeehhhhhhHHhh-----hhccCCccceeeecCCC--------C
Confidence 34789999999999999999777766 8999986554433 36799999999999998 6
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
++++|+.|-.|+||+. .+. +++.++.+|-+.|+.+.|++ .--.|+++|+|.+|+||+..+.+++.. +
T Consensus 65 lFVSGGDDykIkVWnY------k~r---rclftL~GHlDYVRt~~FHh-eyPWIlSASDDQTIrIWNwqsr~~iav---l 131 (1202)
T KOG0292|consen 65 LFVSGGDDYKIKVWNY------KTR---RCLFTLLGHLDYVRTVFFHH-EYPWILSASDDQTIRIWNWQSRKCIAV---L 131 (1202)
T ss_pred eEEecCCccEEEEEec------ccc---eehhhhccccceeEEeeccC-CCceEEEccCCCeEEEEeccCCceEEE---E
Confidence 9999999999999999 555 89999999999999999998 778999999999999999999988766 3
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc----------------------------eeEEecCCCC
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK----------------------------PVISFSESIK 217 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~----------------------------~~~~~~~~~~ 217 (719)
.+|...|.|..|+|.. .+++++|-|.+|+|||+..-+ .+..+..+|.
T Consensus 132 ----tGHnHYVMcAqFhptE-DlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHD 206 (1202)
T KOG0292|consen 132 ----TGHNHYVMCAQFHPTE-DLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHD 206 (1202)
T ss_pred ----ecCceEEEeeccCCcc-ceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccc
Confidence 4578899999999974 599999999999999985311 1222233899
Q ss_pred CceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC-CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC
Q 046451 218 RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM-SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 218 ~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~-~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~ 296 (719)
..|+-++|+|.- -+|++|++|. .|++|.+...+ -.+.+..+|...|.++-|+| ..++|++.|+|+.|+|||+..
T Consensus 207 RGVNwaAfhpTl-pliVSG~DDR---qVKlWrmnetKaWEvDtcrgH~nnVssvlfhp-~q~lIlSnsEDksirVwDm~k 281 (1202)
T KOG0292|consen 207 RGVNWAAFHPTL-PLIVSGADDR---QVKLWRMNETKAWEVDTCRGHYNNVSSVLFHP-HQDLILSNSEDKSIRVWDMTK 281 (1202)
T ss_pred cccceEEecCCc-ceEEecCCcc---eeeEEEeccccceeehhhhcccCCcceEEecC-ccceeEecCCCccEEEEeccc
Confidence 999999999987 4888999888 99999986432 23566789999999999999 889999999999999999999
Q ss_pred CeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 297 GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 297 ~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
.+.+.+++..++..+.++-+|.. +++++|- |+-+.||.++..+
T Consensus 282 Rt~v~tfrrendRFW~laahP~l-NLfAAgH-DsGm~VFkleREr 324 (1202)
T KOG0292|consen 282 RTSVQTFRRENDRFWILAAHPEL-NLFAAGH-DSGMIVFKLERER 324 (1202)
T ss_pred ccceeeeeccCCeEEEEEecCCc-ceeeeec-CCceEEEEEcccC
Confidence 99999998888889999999998 6777665 7777777777443
No 56
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.96 E-value=1.1e-28 Score=251.40 Aligned_cols=309 Identities=16% Similarity=0.262 Sum_probs=235.4
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
...|+++++.|.|-.|++|+.|..| ++||+..........-.-.-.....|+++.|++++ +.
T Consensus 167 tk~Vsal~~Dp~GaR~~sGs~Dy~v----------~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg--------~~ 228 (641)
T KOG0772|consen 167 TKIVSALAVDPSGARFVSGSLDYTV----------KFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTG--------DQ 228 (641)
T ss_pred ceEEEEeeecCCCceeeeccccceE----------EEEecccccccchhhhccCcccccccceeeecCCC--------Ce
Confidence 3568899999999999999887766 88998755433222111112356789999999998 57
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCce---eeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLI---AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~---~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
|++.+....++|+|-+.........+.+.+ ...++|...++|.+|+|++.+.|++++.||+++|||+++.+....+
T Consensus 229 iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qV- 307 (641)
T KOG0772|consen 229 ILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQV- 307 (641)
T ss_pred EEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeE-
Confidence 777777888999996432221111122222 3456899999999999988899999999999999999887654333
Q ss_pred CccCC-CCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc--eeEEecCCCCC--ceeEEEECCCCCcEEEEEeC
Q 046451 164 PLRGN-GSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK--PVISFSESIKR--RCSVLQWNPDVATQLVVASD 238 (719)
Q Consensus 164 ~l~~~-~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~~~~~--~i~~l~~sp~g~~~l~~~s~ 238 (719)
++.. ..+.+-.++.++|+++| .+|++|+.||.|.+||..+.. ....+...|.. .|+||.|+.|| ++|++-+.
T Consensus 308 -ik~k~~~g~Rv~~tsC~~nrdg-~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg-~~LlSRg~ 384 (641)
T KOG0772|consen 308 -IKTKPAGGKRVPVTSCAWNRDG-KLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDG-NYLLSRGF 384 (641)
T ss_pred -EeeccCCCcccCceeeecCCCc-chhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEecccc-chhhhccC
Confidence 2211 12344578999999998 589999999999999986542 33344445666 99999999999 57888888
Q ss_pred CCCCCcEEEEecCCCCCceEEeeCCC--CCeeEEEeCCCCCCeEEEEeC------CCcEEEEECCCCeEEEEecCCCCCe
Q 046451 239 EDSSPALRLWDMRNTMSPVKEFVGHT--KGVIAMSWCPNDSSYLLTCAK------DNRTICWDTVSGEIVSELPAGTNWN 310 (719)
Q Consensus 239 d~~~~~I~lwDl~~~~~~~~~~~~h~--~~V~~v~~sp~d~~~l~sgs~------Dg~I~iwd~~~~~~~~~l~~h~~~v 310 (719)
|+ ++++||+|+.++++....+-. ..-+.++||| +.++|++|+. .|.+.+||..+.+.++++......|
T Consensus 385 D~---tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSP-d~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSv 460 (641)
T KOG0772|consen 385 DD---TLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSP-DDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASV 460 (641)
T ss_pred CC---ceeeeeccccccchhhhcCCCccCCCCccccCC-CceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceE
Confidence 88 899999999988887776543 3557899999 8899999863 4789999999999999998888889
Q ss_pred EEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 311 FDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 311 ~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
..+.|+|.- +.|..|+.||.++||-=.+...
T Consensus 461 v~~~WhpkL-NQi~~gsgdG~~~vyYdp~~S~ 491 (641)
T KOG0772|consen 461 VRCLWHPKL-NQIFAGSGDGTAHVYYDPNESI 491 (641)
T ss_pred EEEeecchh-hheeeecCCCceEEEECccccc
Confidence 999999998 5566666699999986555444
No 57
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.4e-28 Score=264.23 Aligned_cols=250 Identities=22% Similarity=0.364 Sum_probs=222.0
Q ss_pred CCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEE
Q 046451 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLAS 141 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~las 141 (719)
..+.+|..++|+|.. -+|+++-.+|.|++||. ..+ .++..|..|.++|+.++|++ ...+|++
T Consensus 7 skSsRvKglsFHP~r--------PwILtslHsG~IQlWDY------RM~---tli~rFdeHdGpVRgv~FH~-~qplFVS 68 (1202)
T KOG0292|consen 7 SKSSRVKGLSFHPKR--------PWILTSLHSGVIQLWDY------RMG---TLIDRFDEHDGPVRGVDFHP-TQPLFVS 68 (1202)
T ss_pred cccccccceecCCCC--------CEEEEeecCceeeeehh------hhh---hHHhhhhccCCccceeeecC-CCCeEEe
Confidence 356789999999987 59999999999999999 666 88999999999999999999 8899999
Q ss_pred EeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCcee
Q 046451 142 GADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCS 221 (719)
Q Consensus 142 gs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~ 221 (719)
|++|-+|+||+..+.+++.+ + .+|-+.|+.+.|++.- -+|+++|+|.+|+||+..+++++..+. +|...|.
T Consensus 69 GGDDykIkVWnYk~rrclft---L----~GHlDYVRt~~FHhey-PWIlSASDDQTIrIWNwqsr~~iavlt-GHnHYVM 139 (1202)
T KOG0292|consen 69 GGDDYKIKVWNYKTRRCLFT---L----LGHLDYVRTVFFHHEY-PWILSASDDQTIRIWNWQSRKCIAVLT-GHNHYVM 139 (1202)
T ss_pred cCCccEEEEEecccceehhh---h----ccccceeEEeeccCCC-ceEEEccCCCeEEEEeccCCceEEEEe-cCceEEE
Confidence 99999999999999887755 3 4588899999999996 599999999999999999999999999 9999999
Q ss_pred EEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC----------------------------ceEEeeCCCCCeeEEEeC
Q 046451 222 VLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS----------------------------PVKEFVGHTKGVIAMSWC 273 (719)
Q Consensus 222 ~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~----------------------------~~~~~~~h~~~V~~v~~s 273 (719)
|..|+|.. .++++++-|. +|++||+...++ ....++||..+|+-++|+
T Consensus 140 cAqFhptE-DlIVSaSLDQ---TVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfh 215 (1202)
T KOG0292|consen 140 CAQFHPTE-DLIVSASLDQ---TVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFH 215 (1202)
T ss_pred eeccCCcc-ceEEEecccc---eEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEec
Confidence 99999975 5899999998 999999852110 123568999999999999
Q ss_pred CCCCCeEEEEeCCCcEEEEECCCCe--EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 274 PNDSSYLLTCAKDNRTICWDTVSGE--IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 274 p~d~~~l~sgs~Dg~I~iwd~~~~~--~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
| .-.+|++|++|..|++|.+..-+ .+.+..+|.+.|.++-|+|.. .+|++.|+|++|+|||++..+.+.
T Consensus 216 p-TlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q-~lIlSnsEDksirVwDm~kRt~v~ 286 (1202)
T KOG0292|consen 216 P-TLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQ-DLILSNSEDKSIRVWDMTKRTSVQ 286 (1202)
T ss_pred C-CcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCcc-ceeEecCCCccEEEEeccccccee
Confidence 9 88999999999999999886543 456678999999999999987 799999999999999999987766
No 58
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=4.6e-28 Score=224.66 Aligned_cols=280 Identities=17% Similarity=0.235 Sum_probs=229.4
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
+.+.|..+.|+-||+|.++++.|.+| ++|+...+... ....+|..+|.+++.+.|+ .
T Consensus 16 ~qgaV~avryN~dGnY~ltcGsdrtv----------rLWNp~rg~li-----ktYsghG~EVlD~~~s~Dn--------s 72 (307)
T KOG0316|consen 16 AQGAVRAVRYNVDGNYCLTCGSDRTV----------RLWNPLRGALI-----KTYSGHGHEVLDAALSSDN--------S 72 (307)
T ss_pred cccceEEEEEccCCCEEEEcCCCceE----------Eeeccccccee-----eeecCCCceeeeccccccc--------c
Confidence 45789999999999999999877666 78887654433 3346799999999999987 6
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC--CCccC
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE--PSHFP 163 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~--~~~~~ 163 (719)
.|++|+.|..|.+||+ .++ +.++.+.+|.+.|+.+.|+. +...+++|+.|.++++||.+.... ++.
T Consensus 73 kf~s~GgDk~v~vwDV------~TG---kv~Rr~rgH~aqVNtV~fNe-esSVv~SgsfD~s~r~wDCRS~s~ePiQi-- 140 (307)
T KOG0316|consen 73 KFASCGGDKAVQVWDV------NTG---KVDRRFRGHLAQVNTVRFNE-ESSVVASGSFDSSVRLWDCRSRSFEPIQI-- 140 (307)
T ss_pred ccccCCCCceEEEEEc------ccC---eeeeecccccceeeEEEecC-cceEEEeccccceeEEEEcccCCCCccch--
Confidence 8999999999999999 778 99999999999999999998 789999999999999999987543 222
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~ 243 (719)
+ ....+.|.++..+. +.|++|+.||+++.||++.++....+ ...+|++++|++|+. ..++++.++
T Consensus 141 -l----dea~D~V~Si~v~~---heIvaGS~DGtvRtydiR~G~l~sDy---~g~pit~vs~s~d~n-c~La~~l~s--- 205 (307)
T KOG0316|consen 141 -L----DEAKDGVSSIDVAE---HEIVAGSVDGTVRTYDIRKGTLSSDY---FGHPITSVSFSKDGN-CSLASSLDS--- 205 (307)
T ss_pred -h----hhhcCceeEEEecc---cEEEeeccCCcEEEEEeecceeehhh---cCCcceeEEecCCCC-EEEEeeccc---
Confidence 2 22456899998864 57999999999999999999876554 477899999999995 666777776
Q ss_pred cEEEEecCCCCCceEEeeCCCCCee--EEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCC-eEEeEEcCCCC
Q 046451 244 ALRLWDMRNTMSPVKEFVGHTKGVI--AMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNW-NFDIHWYPKIP 320 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~~~V~--~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~-v~~l~~spdg~ 320 (719)
+|++.|-.++ +.+..+.+|...-. .++++. ....+++|++||.|++||+.....+..+..+... |.++.++|...
T Consensus 206 tlrLlDk~tG-klL~sYkGhkn~eykldc~l~q-sdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~ 283 (307)
T KOG0316|consen 206 TLRLLDKETG-KLLKSYKGHKNMEYKLDCCLNQ-SDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMD 283 (307)
T ss_pred eeeecccchh-HHHHHhcccccceeeeeeeecc-cceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCcc
Confidence 8999998765 78888999986544 445665 6678999999999999999999999999888775 89999999885
Q ss_pred CEEEEEeCCCcEEEEeCCC
Q 046451 321 GVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 321 ~~las~s~Dg~I~iwd~~~ 339 (719)
.++.++ ++.+.+|.-+.
T Consensus 284 ~f~~A~--~~~~~~~~~~~ 300 (307)
T KOG0316|consen 284 DFITAT--GHGDLFWYQEN 300 (307)
T ss_pred ceeEec--CCceeceeehh
Confidence 555444 45666665443
No 59
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=3e-28 Score=225.86 Aligned_cols=250 Identities=18% Similarity=0.312 Sum_probs=216.8
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
..+.+.|..+.|+-+| ++.++++.|.+|++|+. ..+ .+++++.+|...|.+++.+. |+..|+
T Consensus 14 ~~~qgaV~avryN~dG--------nY~ltcGsdrtvrLWNp------~rg---~liktYsghG~EVlD~~~s~-Dnskf~ 75 (307)
T KOG0316|consen 14 DCAQGAVRAVRYNVDG--------NYCLTCGSDRTVRLWNP------LRG---ALIKTYSGHGHEVLDAALSS-DNSKFA 75 (307)
T ss_pred cccccceEEEEEccCC--------CEEEEcCCCceEEeecc------ccc---ceeeeecCCCceeeeccccc-cccccc
Confidence 4578899999999999 79999999999999999 667 89999999999999999988 788999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC--ceeEEecCCCCC
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ--KPVISFSESIKR 218 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~--~~~~~~~~~~~~ 218 (719)
+|+.|..|.+||+++++..+.+ .+|.+.|+.+.|+.+. .++++|+.|.++++||.++. +++..+. ....
T Consensus 76 s~GgDk~v~vwDV~TGkv~Rr~-------rgH~aqVNtV~fNees-SVv~SgsfD~s~r~wDCRS~s~ePiQild-ea~D 146 (307)
T KOG0316|consen 76 SCGGDKAVQVWDVNTGKVDRRF-------RGHLAQVNTVRFNEES-SVVASGSFDSSVRLWDCRSRSFEPIQILD-EAKD 146 (307)
T ss_pred cCCCCceEEEEEcccCeeeeec-------ccccceeeEEEecCcc-eEEEeccccceeEEEEcccCCCCccchhh-hhcC
Confidence 9999999999999999988773 3588899999999985 69999999999999999875 5677776 6778
Q ss_pred ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 219 RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 219 ~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
.|.+|..+. +.|++|+.|| +++.||+|.+. ....+. ..+|++++|++ |++.+++++.|++|++.|-.+|+
T Consensus 147 ~V~Si~v~~---heIvaGS~DG---tvRtydiR~G~-l~sDy~--g~pit~vs~s~-d~nc~La~~l~stlrLlDk~tGk 216 (307)
T KOG0316|consen 147 GVSSIDVAE---HEIVAGSVDG---TVRTYDIRKGT-LSSDYF--GHPITSVSFSK-DGNCSLASSLDSTLRLLDKETGK 216 (307)
T ss_pred ceeEEEecc---cEEEeeccCC---cEEEEEeecce-eehhhc--CCcceeEEecC-CCCEEEEeeccceeeecccchhH
Confidence 899999884 4699999998 99999999863 222233 35899999999 99999999999999999999999
Q ss_pred EEEEecCCCCCe--EEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCC
Q 046451 299 IVSELPAGTNWN--FDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDS 348 (719)
Q Consensus 299 ~~~~l~~h~~~v--~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~ 348 (719)
++..+++|.+.- .+++++... ..+++|++||.|++||+....++...+.
T Consensus 217 lL~sYkGhkn~eykldc~l~qsd-thV~sgSEDG~Vy~wdLvd~~~~sk~~~ 267 (307)
T KOG0316|consen 217 LLKSYKGHKNMEYKLDCCLNQSD-THVFSGSEDGKVYFWDLVDETQISKLSV 267 (307)
T ss_pred HHHHhcccccceeeeeeeecccc-eeEEeccCCceEEEEEeccceeeeeecc
Confidence 999999998744 445666665 7999999999999999999988764433
No 60
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=3e-28 Score=263.59 Aligned_cols=300 Identities=15% Similarity=0.208 Sum_probs=216.7
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeec------ccCCCCCceeeeecCCCCC
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVG------ESPSSERFNRLAWGKNGSG 78 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~------~~~~~~~V~~l~~sp~g~~ 78 (719)
.|.+.|+++.||+||+|||+|+.||.| +||.+...+.. .+.... .......+.-+.-+.+..
T Consensus 265 ah~gaIw~mKFS~DGKyLAsaGeD~vi----------rVWkVie~e~~-~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~- 332 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKYLASAGEDGVI----------RVWKVIESERM-RVAEGDSSCMYFEYNANSQIEPSTSSEEKI- 332 (712)
T ss_pred ccCCcEEEEEeCCCCceeeecCCCceE----------EEEEEeccchh-cccccccchhhhhhhhccccCccccccccc-
Confidence 367899999999999999999999887 67777642221 000000 000001111111111000
Q ss_pred CCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC
Q 046451 79 SEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE 158 (719)
Q Consensus 79 ~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~ 158 (719)
.......-.+.....+ +.+.. .-.-..+.+..+.+|.+.|.+|.|+. .++|++++.|.+|++|++...++
T Consensus 333 --~~~~s~~~~~~~s~~~-~~p~~-----~f~f~ekP~~ef~GHt~DILDlSWSK--n~fLLSSSMDKTVRLWh~~~~~C 402 (712)
T KOG0283|consen 333 --SSRTSSSRKGSQSPCV-LLPLK-----AFVFSEKPFCEFKGHTADILDLSWSK--NNFLLSSSMDKTVRLWHPGRKEC 402 (712)
T ss_pred --cccccccccccCCccc-cCCCc-----cccccccchhhhhccchhheeccccc--CCeeEeccccccEEeecCCCcce
Confidence 0000112222222232 22211 00111167888999999999999996 58999999999999999999988
Q ss_pred CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeC
Q 046451 159 PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASD 238 (719)
Q Consensus 159 ~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~ 238 (719)
+..| .|.+.|+||+|+|.+.++|++|+-||.|+||++...+.+.-.. ...-|++++|.||| ...++|+.
T Consensus 403 L~~F--------~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D--l~~lITAvcy~PdG-k~avIGt~ 471 (712)
T KOG0283|consen 403 LKVF--------SHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWND--LRDLITAVCYSPDG-KGAVIGTF 471 (712)
T ss_pred eeEE--------ecCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehh--hhhhheeEEeccCC-ceEEEEEe
Confidence 8775 4888999999999999999999999999999999887776665 56899999999998 57889999
Q ss_pred CCCCCcEEEEecCCCCCceEEee--CC------CCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCC--
Q 046451 239 EDSSPALRLWDMRNTMSPVKEFV--GH------TKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTN-- 308 (719)
Q Consensus 239 d~~~~~I~lwDl~~~~~~~~~~~--~h------~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~-- 308 (719)
+| .+++|+.+.. +....+. .| ...|+.+.|.|.+.+.|++.+.|.+|||||.++.+++..|+++.+
T Consensus 472 ~G---~C~fY~t~~l-k~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~ 547 (712)
T KOG0283|consen 472 NG---YCRFYDTEGL-KLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTS 547 (712)
T ss_pred cc---EEEEEEccCC-eEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCC
Confidence 98 8999998764 2222211 11 227999999986777788899999999999999999999987654
Q ss_pred CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 309 WNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 309 ~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
.-....|+.|| +.|+++++|..|+||++..-..
T Consensus 548 SQ~~Asfs~Dg-k~IVs~seDs~VYiW~~~~~~~ 580 (712)
T KOG0283|consen 548 SQISASFSSDG-KHIVSASEDSWVYIWKNDSFNS 580 (712)
T ss_pred cceeeeEccCC-CEEEEeecCceEEEEeCCCCcc
Confidence 23467899999 7999999999999999866544
No 61
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=8.7e-29 Score=232.05 Aligned_cols=247 Identities=20% Similarity=0.394 Sum_probs=212.2
Q ss_pred cCccceEEEcCCC-CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 7 INRSASVAFAPDA-PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 7 ~~~V~~vafSpdg-~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
.+.+..|+||++. +.+++++.||.+ +|||+.... .++....+|+.+|.++.|+.... +
T Consensus 60 ~D~LfdV~Wse~~e~~~~~a~GDGSL----------rl~d~~~~s----~Pi~~~kEH~~EV~Svdwn~~~r-------~ 118 (311)
T KOG0277|consen 60 EDGLFDVAWSENHENQVIAASGDGSL----------RLFDLTMPS----KPIHKFKEHKREVYSVDWNTVRR-------R 118 (311)
T ss_pred ccceeEeeecCCCcceEEEEecCceE----------EEeccCCCC----cchhHHHhhhhheEEeccccccc-------e
Confidence 3667899999976 567777666655 899955332 24456678999999999998754 6
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
.+++++.|++|+||+. ... .-+.++.+|...|....|+|...++|++++.|+.+++||++.......
T Consensus 119 ~~ltsSWD~TiKLW~~------~r~---~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~---- 185 (311)
T KOG0277|consen 119 IFLTSSWDGTIKLWDP------NRP---NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS---- 185 (311)
T ss_pred eEEeeccCCceEeecC------CCC---cceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeE----
Confidence 7888899999999998 344 778889999999999999999999999999999999999987654433
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC-ceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ-KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
...|..+|.|+.|+.-+.++|++|+.|+.|++||+++- .++..+. +|.-.|..+.|+|....+|++++.|- +
T Consensus 186 ---i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~-gh~~AVRkvk~Sph~~~lLaSasYDm---T 258 (311)
T KOG0277|consen 186 ---IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELN-GHGLAVRKVKFSPHHASLLASASYDM---T 258 (311)
T ss_pred ---EEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeec-CCceEEEEEecCcchhhHhhhccccc---e
Confidence 24577899999999988899999999999999999985 4566675 89999999999999989999999999 9
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEEC
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDT 294 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~ 294 (719)
++|||.......+.+...|++-|..+.||..+..++++++.|+.++||+.
T Consensus 259 ~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 259 VRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred EEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 99999987777788888899999999999988999999999999999984
No 62
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.96 E-value=4.4e-29 Score=253.42 Aligned_cols=288 Identities=16% Similarity=0.299 Sum_probs=235.2
Q ss_pred ecccCCCCCceeeeecC-CCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCC
Q 046451 58 VGESPSSERFNRLAWGK-NGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTP 136 (719)
Q Consensus 58 ~~~~~~~~~V~~l~~sp-~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~ 136 (719)
....+|...|+++.|.+ .+ .+|++++.|+.|+||++. .++ .+++++.+|...|.+++|+. ++
T Consensus 208 ~~~~gH~kgvsai~~fp~~~--------hLlLS~gmD~~vklW~vy-----~~~---~~lrtf~gH~k~Vrd~~~s~-~g 270 (503)
T KOG0282|consen 208 HNLSGHTKGVSAIQWFPKKG--------HLLLSGGMDGLVKLWNVY-----DDR---RCLRTFKGHRKPVRDASFNN-CG 270 (503)
T ss_pred eeccCCccccchhhhcccee--------eEEEecCCCceEEEEEEe-----cCc---ceehhhhcchhhhhhhhccc-cC
Confidence 44568999999999999 44 799999999999999985 345 89999999999999999999 88
Q ss_pred CEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCC
Q 046451 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESI 216 (719)
Q Consensus 137 ~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~ 216 (719)
..|++++.|+.|++||++++++...+. ....++|+.|+|++.++|++|+.|+.|+.||+++++.+.++. .|
T Consensus 271 ~~fLS~sfD~~lKlwDtETG~~~~~f~--------~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd-~h 341 (503)
T KOG0282|consen 271 TSFLSASFDRFLKLWDTETGQVLSRFH--------LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYD-RH 341 (503)
T ss_pred CeeeeeecceeeeeeccccceEEEEEe--------cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHH-hh
Confidence 999999999999999999999886641 233789999999998999999999999999999999999888 89
Q ss_pred CCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC
Q 046451 217 KRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 217 ~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~ 296 (719)
-+.|..|.|-++| ..++++++|+ +++||+.+...........+....-+|..+| ++.++++-+.|+.|.||.+..
T Consensus 342 Lg~i~~i~F~~~g-~rFissSDdk---s~riWe~~~~v~ik~i~~~~~hsmP~~~~~P-~~~~~~aQs~dN~i~ifs~~~ 416 (503)
T KOG0282|consen 342 LGAILDITFVDEG-RRFISSSDDK---SVRIWENRIPVPIKNIADPEMHTMPCLTLHP-NGKWFAAQSMDNYIAIFSTVP 416 (503)
T ss_pred hhheeeeEEccCC-ceEeeeccCc---cEEEEEcCCCccchhhcchhhccCcceecCC-CCCeehhhccCceEEEEeccc
Confidence 9999999999998 5799999998 8999999765322122222334556888999 889999999999999998753
Q ss_pred C---eEEEEecCCC--CCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCC--Cceee
Q 046451 297 G---EIVSELPAGT--NWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRP--AGASF 369 (719)
Q Consensus 297 ~---~~~~~l~~h~--~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~--~~~s~ 369 (719)
. .....+++|. +.-..+.||||| .+|++|+.||.+.+||..+.+++......- .......|.+.. ..++.
T Consensus 417 ~~r~nkkK~feGh~vaGys~~v~fSpDG-~~l~SGdsdG~v~~wdwkt~kl~~~lkah~--~~ci~v~wHP~e~Skvat~ 493 (503)
T KOG0282|consen 417 PFRLNKKKRFEGHSVAGYSCQVDFSPDG-RTLCSGDSDGKVNFWDWKTTKLVSKLKAHD--QPCIGVDWHPVEPSKVATC 493 (503)
T ss_pred ccccCHhhhhcceeccCceeeEEEcCCC-CeEEeecCCccEEEeechhhhhhhccccCC--cceEEEEecCCCcceeEec
Confidence 2 2334566774 355678999999 899999999999999999999887444331 112334476543 45788
Q ss_pred eeCCcEEEEc
Q 046451 370 GFGGKLVSFH 379 (719)
Q Consensus 370 s~~Gklv~~~ 379 (719)
+-||.+..|.
T Consensus 494 ~w~G~Ikiwd 503 (503)
T KOG0282|consen 494 GWDGLIKIWD 503 (503)
T ss_pred ccCceeEecC
Confidence 8899888773
No 63
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=1.2e-26 Score=213.57 Aligned_cols=301 Identities=21% Similarity=0.302 Sum_probs=231.8
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCC----cccceeecccCCCCCceeeeecCCCCCC
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSE----DRDLLLVGESPSSERFNRLAWGKNGSGS 79 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~----~~~~~~~~~~~~~~~V~~l~~sp~g~~~ 79 (719)
|...+.|.+++|+|.|.+.|+|+...+++|... -.+.|+..... ...+.+.....|.+.|+|.+|+++|
T Consensus 29 l~dsqairav~fhp~g~lyavgsnskt~ric~y----p~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~g--- 101 (350)
T KOG0641|consen 29 LEDSQAIRAVAFHPAGGLYAVGSNSKTFRICAY----PALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCG--- 101 (350)
T ss_pred ecchhheeeEEecCCCceEEeccCCceEEEEcc----ccccCcccccccccCCCeEEeeeccccCccEEEEEecCcc---
Confidence 345578999999999999999998888766211 11223322111 1233345566799999999999999
Q ss_pred CCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC---CCCEEEEEe-CCCcEEEEcCCC
Q 046451 80 EDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF---TPNLLASGA-DDGEICIWDLSA 155 (719)
Q Consensus 80 ~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~---~~~~lasgs-~dg~I~iwdl~~ 155 (719)
.+|++|+.|..|++.-+.......+ .....+.-|.+.|.+++|..+ .+.+|++++ .|..|++-|..+
T Consensus 102 -----eliatgsndk~ik~l~fn~dt~~~~----g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~ 172 (350)
T KOG0641|consen 102 -----ELIATGSNDKTIKVLPFNADTCNAT----GHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGR 172 (350)
T ss_pred -----CeEEecCCCceEEEEeccccccccc----CcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCC
Confidence 7999999999999987643211111 233456779999999999642 345777765 467788888877
Q ss_pred CCCCCccCCccCCCCCCCCCeEEE-EecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC------CCCCceeEEEECCC
Q 046451 156 PAEPSHFPPLRGNGSAAQGEISFV-SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE------SIKRRCSVLQWNPD 228 (719)
Q Consensus 156 ~~~~~~~~~l~~~~~~h~~~I~~l-~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~------~~~~~i~~l~~sp~ 228 (719)
+..... ..+|.+.|.++ .|+ + ..+++|+.|.+|++||++-..++.++.. ...+.|.+++..|.
T Consensus 173 g~~~~a-------~sghtghilalyswn--~-~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdps 242 (350)
T KOG0641|consen 173 GQGFHA-------LSGHTGHILALYSWN--G-AMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPS 242 (350)
T ss_pred CCccee-------ecCCcccEEEEEEec--C-cEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCC
Confidence 776544 24678888776 343 3 5899999999999999999888887764 12367899999999
Q ss_pred CCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE-----EEEe
Q 046451 229 VATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI-----VSEL 303 (719)
Q Consensus 229 g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~-----~~~l 303 (719)
| ++|++|..|. +..+||+|.+ ..+..+..|...|.++.|+| +..++++|+.|..|++-|+. |.+ +..+
T Consensus 243 g-rll~sg~~ds---sc~lydirg~-r~iq~f~phsadir~vrfsp-~a~yllt~syd~~ikltdlq-gdla~el~~~vv 315 (350)
T KOG0641|consen 243 G-RLLASGHADS---SCMLYDIRGG-RMIQRFHPHSADIRCVRFSP-GAHYLLTCSYDMKIKLTDLQ-GDLAHELPIMVV 315 (350)
T ss_pred c-ceeeeccCCC---ceEEEEeeCC-ceeeeeCCCccceeEEEeCC-CceEEEEecccceEEEeecc-cchhhcCceEEE
Confidence 9 5899999888 8999999875 78899999999999999999 89999999999999999985 333 3344
Q ss_pred cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 304 PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 304 ~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
..|.+.+..+.|++.. .-+++.+.|.++.+|.+.
T Consensus 316 ~ehkdk~i~~rwh~~d-~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 316 AEHKDKAIQCRWHPQD-FSFISSSADKTATLWALN 349 (350)
T ss_pred EeccCceEEEEecCcc-ceeeeccCcceEEEeccC
Confidence 5788889999999998 788899999999999875
No 64
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.96 E-value=4e-28 Score=233.09 Aligned_cols=296 Identities=15% Similarity=0.249 Sum_probs=232.5
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEee------------ccCCccc-ceeecccCCCCCceeee
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLD------------FQSEDRD-LLLVGESPSSERFNRLA 71 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~------------~~~~~~~-~~~~~~~~~~~~V~~l~ 71 (719)
.|...+.+.+||+||.++|+|+.|-.| +|+|+. .+..... -.+....+|-+.|+++.
T Consensus 110 ~HK~~cR~aafs~DG~lvATGsaD~SI----------Kildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~ 179 (430)
T KOG0640|consen 110 SHKSPCRAAAFSPDGSLVATGSADASI----------KILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLD 179 (430)
T ss_pred ecccceeeeeeCCCCcEEEccCCcceE----------EEeehhhhhhhcchhhhccCCcccCCceEeehhhccCccccee
Confidence 356778899999999999999877766 777765 2222222 22355678999999999
Q ss_pred ecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEE
Q 046451 72 WGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIW 151 (719)
Q Consensus 72 ~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iw 151 (719)
|+|.. .+|++|+.|++|++||+.+... +...........|.+|+|+| .|.+|++|..-.++++|
T Consensus 180 FHPre--------~ILiS~srD~tvKlFDfsK~sa-------KrA~K~~qd~~~vrsiSfHP-sGefllvgTdHp~~rlY 243 (430)
T KOG0640|consen 180 FHPRE--------TILISGSRDNTVKLFDFSKTSA-------KRAFKVFQDTEPVRSISFHP-SGEFLLVGTDHPTLRLY 243 (430)
T ss_pred ecchh--------heEEeccCCCeEEEEecccHHH-------HHHHHHhhccceeeeEeecC-CCceEEEecCCCceeEE
Confidence 99987 7999999999999999954211 22222223567899999999 89999999999999999
Q ss_pred cCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCC-CCceeEEEECCCCC
Q 046451 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESI-KRRCSVLQWNPDVA 230 (719)
Q Consensus 152 dl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~-~~~i~~l~~sp~g~ 230 (719)
|+++.++...-. ....|.+.|+++.+++.+ ++.++++.||.|+|||=-+++++.++...| ...|.+..|..+|+
T Consensus 244 dv~T~Qcfvsan----Pd~qht~ai~~V~Ys~t~-~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~k 318 (430)
T KOG0640|consen 244 DVNTYQCFVSAN----PDDQHTGAITQVRYSSTG-SLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGK 318 (430)
T ss_pred eccceeEeeecC----cccccccceeEEEecCCc-cEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCe
Confidence 999987654321 234588899999999997 699999999999999999999999998755 56789999999984
Q ss_pred cEEEEEeCCCCCCcEEEEecCCCCCceEEeeCC-----CCCeeEEEeCCCCCCeEEEEe-CCCcEEEEECCCCeEEEEe-
Q 046451 231 TQLVVASDEDSSPALRLWDMRNTMSPVKEFVGH-----TKGVIAMSWCPNDSSYLLTCA-KDNRTICWDTVSGEIVSEL- 303 (719)
Q Consensus 231 ~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h-----~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~~~~~~~~l- 303 (719)
++++.+.|. .+++|.+.++ .++.++.|- ...-+...|+. ..++++.-. ..+.+.-||.+++..+..+
T Consensus 319 -yiLsSG~DS---~vkLWEi~t~-R~l~~YtGAg~tgrq~~rtqAvFNh-tEdyVl~pDEas~slcsWdaRtadr~~l~s 392 (430)
T KOG0640|consen 319 -YILSSGKDS---TVKLWEISTG-RMLKEYTGAGTTGRQKHRTQAVFNH-TEDYVLFPDEASNSLCSWDARTADRVALLS 392 (430)
T ss_pred -EEeecCCcc---eeeeeeecCC-ceEEEEecCCcccchhhhhhhhhcC-ccceEEccccccCceeeccccchhhhhhcc
Confidence 677888887 9999999876 566666543 11224456776 556665544 5678999999998776655
Q ss_pred cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 304 PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 304 ~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
.+|++.+..+.-||.+ -.+.+|+.|.++++|--.
T Consensus 393 lgHn~a~R~i~HSP~~-p~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 393 LGHNGAVRWIVHSPVE-PAFMTCSDDFRARFWYRR 426 (430)
T ss_pred cCCCCCceEEEeCCCC-Cceeeecccceeeeeeec
Confidence 3799999999999999 589999999999999754
No 65
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=7.6e-28 Score=266.58 Aligned_cols=306 Identities=19% Similarity=0.257 Sum_probs=243.0
Q ss_pred CccceEEEcCCCCeEEEee--ccceeecccCCCceEEEEEeeccC------Cc-ccceeecccCCCCCceeeeecCCCCC
Q 046451 8 NRSASVAFAPDAPYMAAGT--MAGAVDLSFSSSANLEIFKLDFQS------ED-RDLLLVGESPSSERFNRLAWGKNGSG 78 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs--~dG~v~v~~s~~~~i~iwd~~~~~------~~-~~~~~~~~~~~~~~V~~l~~sp~g~~ 78 (719)
.+|.++..+|||..+|||+ .||.++ ||+.+.-. .. ....+.....|.+.|+|+.|++||
T Consensus 14 ~~IfSIdv~pdg~~~aTgGq~~d~~~~----------iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG-- 81 (942)
T KOG0973|consen 14 KSIFSIDVHPDGVKFATGGQVLDGGIV----------IWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDG-- 81 (942)
T ss_pred eeEEEEEecCCceeEecCCccccccce----------eeccccccchhhhhhcccchhheeeccccCceeEEEECCCC--
Confidence 5689999999999999998 777664 55543211 00 111234456799999999999999
Q ss_pred CCCCccceEEEEcCCCcEEEEcCCccccC---------CCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEE
Q 046451 79 SEDFSLGLVAGGLVDGSIDIWNPLSLISS---------GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEIC 149 (719)
Q Consensus 79 ~~~~~~~~lasgs~dg~I~lwd~~~~~~~---------~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~ 149 (719)
.+||+|++|+.|.||+....... ..-..++.+..+.+|...|.+++|+| ++.+|++++.|++|.
T Consensus 82 ------~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp-~~~~lvS~s~DnsVi 154 (942)
T KOG0973|consen 82 ------SYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP-DDSLLVSVSLDNSVI 154 (942)
T ss_pred ------CeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC-CccEEEEecccceEE
Confidence 79999999999999998631000 11123457788999999999999999 889999999999999
Q ss_pred EEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-----CCCCceeEEE
Q 046451 150 IWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-----SIKRRCSVLQ 224 (719)
Q Consensus 150 iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-----~~~~~i~~l~ 224 (719)
|||..+.+.... ..+|.+.|..+.|+|-| ++|++-+.|++|+||++.+....+.+.. .....+..+.
T Consensus 155 iwn~~tF~~~~v-------l~~H~s~VKGvs~DP~G-ky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlS 226 (942)
T KOG0973|consen 155 IWNAKTFELLKV-------LRGHQSLVKGVSWDPIG-KYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLS 226 (942)
T ss_pred EEccccceeeee-------eecccccccceEECCcc-CeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecc
Confidence 999999865544 34688899999999998 5999999999999999888766666653 2345678899
Q ss_pred ECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCC------C------CC----eEEEEeCCCc
Q 046451 225 WNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPN------D------SS----YLLTCAKDNR 288 (719)
Q Consensus 225 ~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~------d------~~----~l~sgs~Dg~ 288 (719)
|+|||.++....+..+...++.|.+-. ..+.-..|.||..++.+++|+|. + .+ .+++|+.|++
T Consensus 227 WSPDG~~las~nA~n~~~~~~~IieR~-tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrS 305 (942)
T KOG0973|consen 227 WSPDGHHLASPNAVNGGKSTIAIIERG-TWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRS 305 (942)
T ss_pred cCCCcCeecchhhccCCcceeEEEecC-CceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCcc
Confidence 999997665556666666789999964 44666789999999999999971 1 11 6789999999
Q ss_pred EEEEECCCCeEEEEecC-CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 289 TICWDTVSGEIVSELPA-GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 289 I~iwd~~~~~~~~~l~~-h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
|.||.....+.+..+.. ....|.+++|++|| ..|++||.||+|.+..++..++
T Consensus 306 lSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG-~~LfacS~DGtV~~i~Fee~El 359 (942)
T KOG0973|consen 306 LSVWNTALPRPLFVIHNLFNKSIVDMSWSPDG-FSLFACSLDGTVALIHFEEKEL 359 (942)
T ss_pred EEEEecCCCCchhhhhhhhcCceeeeeEcCCC-CeEEEEecCCeEEEEEcchHHh
Confidence 99999988777766543 34579999999999 8999999999999999998765
No 66
>PTZ00421 coronin; Provisional
Probab=99.96 E-value=1.2e-26 Score=254.75 Aligned_cols=309 Identities=14% Similarity=0.119 Sum_probs=222.5
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecC-CCCCCCCCccc
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGK-NGSGSEDFSLG 85 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp-~g~~~~~~~~~ 85 (719)
+..|....+++|+..+++++.+.....|...++...++..+.+...... ....+|.+.|++++|++ ++ +
T Consensus 20 ~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~--~~l~GH~~~V~~v~fsP~d~--------~ 89 (493)
T PTZ00421 20 FLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNP--PILLGQEGPIIDVAFNPFDP--------Q 89 (493)
T ss_pred eeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCC--ceEeCCCCCEEEEEEcCCCC--------C
Confidence 4556677788898777777777776666555555544444433322221 11357899999999999 55 6
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|++|+.||+|+|||+..... .......+..+.+|...|.+++|++.+.++|++++.|++|+|||+.+++.... +
T Consensus 90 ~LaSgS~DgtIkIWdi~~~~~--~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~---l 164 (493)
T PTZ00421 90 KLFTASEDGTIMGWGIPEEGL--TQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEV---I 164 (493)
T ss_pred EEEEEeCCCEEEEEecCCCcc--ccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEE---E
Confidence 999999999999999853210 00011456788999999999999995568999999999999999998765433 2
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCC-ceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR-RCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~-~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
..|...|.+++|++++ .+|++++.|++|+|||+++++.+.++. .|.. .+..+.|.+++..++.++.+...++.
T Consensus 165 ----~~h~~~V~sla~spdG-~lLatgs~Dg~IrIwD~rsg~~v~tl~-~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~ 238 (493)
T PTZ00421 165 ----KCHSDQITSLEWNLDG-SLLCTTSKDKKLNIIDPRDGTIVSSVE-AHASAKSQRCLWAKRKDLIITLGCSKSQQRQ 238 (493)
T ss_pred ----cCCCCceEEEEEECCC-CEEEEecCCCEEEEEECCCCcEEEEEe-cCCCCcceEEEEcCCCCeEEEEecCCCCCCe
Confidence 3477789999999997 599999999999999999999888887 5554 45577899887654444433223348
Q ss_pred EEEEecCCCCCceEEeeCCC-CCeeEEEeCCCCCCeEEEEe-CCCcEEEEECCCCeEEEEecC-CCCCeEEeEEcCCCCC
Q 046451 245 LRLWDMRNTMSPVKEFVGHT-KGVIAMSWCPNDSSYLLTCA-KDNRTICWDTVSGEIVSELPA-GTNWNFDIHWYPKIPG 321 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~-~~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~~~~~~~~l~~-h~~~v~~l~~spdg~~ 321 (719)
|++||+++...++..+..+. ..+....|++ ++++|++++ .|+.|++||+.+++.+..+.. +...+..++|.|..
T Consensus 239 VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~-d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk~-- 315 (493)
T PTZ00421 239 IMLWDTRKMASPYSTVDLDQSSALFIPFFDE-DTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPKW-- 315 (493)
T ss_pred EEEEeCCCCCCceeEeccCCCCceEEEEEcC-CCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEecccc--
Confidence 99999998766666554333 4556667888 888888887 599999999999987776544 34467888898864
Q ss_pred EEEEEeCCCcEEEEeCCCC
Q 046451 322 VISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 322 ~las~s~Dg~I~iwd~~~~ 340 (719)
.+-...--..++|.+...
T Consensus 316 -~~dv~~~Ei~r~~~l~~~ 333 (493)
T PTZ00421 316 -SLDTRKCEIARFYALTYH 333 (493)
T ss_pred -cccccceeeeEEEEecCC
Confidence 111111234466666543
No 67
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.96 E-value=1.3e-26 Score=218.25 Aligned_cols=285 Identities=19% Similarity=0.327 Sum_probs=235.9
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.+...|.+|+|+-||..||.|+.|+.+ .+|+++....... ....+|.+.|..++|++...
T Consensus 18 ~~~~~v~Sv~wn~~g~~lasgs~dktv----------~v~n~e~~r~~~~---~~~~gh~~svdql~w~~~~~------- 77 (313)
T KOG1407|consen 18 GHVQKVHSVAWNCDGTKLASGSFDKTV----------SVWNLERDRFRKE---LVYRGHTDSVDQLCWDPKHP------- 77 (313)
T ss_pred hhhhcceEEEEcccCceeeecccCCce----------EEEEecchhhhhh---hcccCCCcchhhheeCCCCC-------
Confidence 356789999999999999999887766 8898886532222 34467889999999999865
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
.++++++.|..|++||+ ..+ +++..+....+.| -+.|+| ++++++.++.|..|.+.|.++.+....+
T Consensus 78 d~~atas~dk~ir~wd~------r~~---k~~~~i~~~~eni-~i~wsp-~g~~~~~~~kdD~it~id~r~~~~~~~~-- 144 (313)
T KOG1407|consen 78 DLFATASGDKTIRIWDI------RSG---KCTARIETKGENI-NITWSP-DGEYIAVGNKDDRITFIDARTYKIVNEE-- 144 (313)
T ss_pred cceEEecCCceEEEEEe------ccC---cEEEEeeccCcce-EEEEcC-CCCEEEEecCcccEEEEEecccceeehh--
Confidence 78999999999999999 445 6666666555554 578999 8899999999999999999987765442
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
.....+..++|+.++ ++|+.....|+|.|.....-+++.++. .|...+.||.|+|+| ++|++|+.|. .
T Consensus 145 ------~~~~e~ne~~w~~~n-d~Fflt~GlG~v~ILsypsLkpv~si~-AH~snCicI~f~p~G-ryfA~GsADA---l 212 (313)
T KOG1407|consen 145 ------QFKFEVNEISWNNSN-DLFFLTNGLGCVEILSYPSLKPVQSIK-AHPSNCICIEFDPDG-RYFATGSADA---L 212 (313)
T ss_pred ------cccceeeeeeecCCC-CEEEEecCCceEEEEeccccccccccc-cCCcceEEEEECCCC-ceEeeccccc---e
Confidence 123367889998665 577777788999999999999999999 899999999999999 5799999998 8
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEE
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~la 324 (719)
+.|||+... .+++.+..+.-+|..+.||- ||++|+++++|..|-|=++.+|..+.++. +.+..+.++|+|.. .+||
T Consensus 213 vSLWD~~EL-iC~R~isRldwpVRTlSFS~-dg~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~-~LLA 288 (313)
T KOG1407|consen 213 VSLWDVDEL-ICERCISRLDWPVRTLSFSH-DGRMLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKR-PLLA 288 (313)
T ss_pred eeccChhHh-hhheeeccccCceEEEEecc-CcceeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCCC-ceee
Confidence 999999754 67788999999999999999 99999999999999999999999999985 45568999999998 6777
Q ss_pred EEeCC---------CcEEEEeCC
Q 046451 325 ASSFD---------GKIGIYNIE 338 (719)
Q Consensus 325 s~s~D---------g~I~iwd~~ 338 (719)
-++.| |.|+||-+.
T Consensus 289 yA~ddk~~d~~reag~vKiFG~~ 311 (313)
T KOG1407|consen 289 YACDDKDGDSNREAGTVKIFGLS 311 (313)
T ss_pred EEecCCCCccccccceeEEecCC
Confidence 76654 456665543
No 68
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.95 E-value=7.3e-27 Score=256.66 Aligned_cols=281 Identities=21% Similarity=0.339 Sum_probs=240.7
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
+...+.+..|. ..++++++.+..+ ++||...+... .....+|.+.|.+++|...+ +
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl----------~~~~~~~~~~i----~~~l~GH~g~V~~l~~~~~~--------~ 262 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTL----------HLWDLNNGYLI----LTRLVGHFGGVWGLAFPSGG--------D 262 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCcee----------EEeecccceEE----EeeccCCCCCceeEEEecCC--------C
Confidence 35567777787 5677788665554 88988754322 23357899999999998744 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|++|+.|.++++||+ .++ .+...+.+|.+.|.++.. ...++++|+.|.+|++|++.++..+..+
T Consensus 263 ~lvsgS~D~t~rvWd~------~sg---~C~~~l~gh~stv~~~~~---~~~~~~sgs~D~tVkVW~v~n~~~l~l~--- 327 (537)
T KOG0274|consen 263 KLVSGSTDKTERVWDC------STG---ECTHSLQGHTSSVRCLTI---DPFLLVSGSRDNTVKVWDVTNGACLNLL--- 327 (537)
T ss_pred EEEEEecCCcEEeEec------CCC---cEEEEecCCCceEEEEEc---cCceEeeccCCceEEEEeccCcceEEEe---
Confidence 9999999999999998 778 999999999999999988 4478999999999999999988776552
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
.+|.+.|+++..+. .++++|+.||+|++||+.+++++.++. +|...|.++.+... ..+++|+.|+ +|
T Consensus 328 ----~~h~~~V~~v~~~~---~~lvsgs~d~~v~VW~~~~~~cl~sl~-gH~~~V~sl~~~~~--~~~~Sgs~D~---~I 394 (537)
T KOG0274|consen 328 ----RGHTGPVNCVQLDE---PLLVSGSYDGTVKVWDPRTGKCLKSLS-GHTGRVYSLIVDSE--NRLLSGSLDT---TI 394 (537)
T ss_pred ----ccccccEEEEEecC---CEEEEEecCceEEEEEhhhceeeeeec-CCcceEEEEEecCc--ceEEeeeecc---ce
Confidence 23888999999982 489999999999999999999999999 89999999988875 4799999998 99
Q ss_pred EEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC-CCCCeEEeEEcCCCCCEEE
Q 046451 246 RLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA-GTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~-h~~~v~~l~~spdg~~~la 324 (719)
++||+++..+++.++.+|..-+.++.+. +++|++++.|++|++||..+++++.++.+ |...|+.+++. ...++
T Consensus 395 kvWdl~~~~~c~~tl~~h~~~v~~l~~~---~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~---~~~il 468 (537)
T KOG0274|consen 395 KVWDLRTKRKCIHTLQGHTSLVSSLLLR---DNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG---KEEIL 468 (537)
T ss_pred EeecCCchhhhhhhhcCCcccccccccc---cceeEeccccccEEEeecccCceeeeeccCCcccEEEeecC---cceEE
Confidence 9999988657899999999999887774 58999999999999999999999999998 66789988887 25788
Q ss_pred EEeCCCcEEEEeCCCCcccc
Q 046451 325 ASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 325 s~s~Dg~I~iwd~~~~~~~~ 344 (719)
+++.||++++||+.+++...
T Consensus 469 ~s~~~~~~~l~dl~~~~~~~ 488 (537)
T KOG0274|consen 469 CSSDDGSVKLWDLRSGTLIR 488 (537)
T ss_pred EEecCCeeEEEecccCchhh
Confidence 88889999999999998876
No 69
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.95 E-value=1.4e-26 Score=228.68 Aligned_cols=288 Identities=17% Similarity=0.326 Sum_probs=232.4
Q ss_pred ecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC--
Q 046451 58 VGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT-- 135 (719)
Q Consensus 58 ~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~-- 135 (719)
...+.|.+.|.++.-.+ +.|++|+.||.+++||. .| +.+..+.+|.+.|.+++|.-.+
T Consensus 99 l~~~~hdDWVSsv~~~~----------~~IltgsYDg~~riWd~-------~G---k~~~~~~Ght~~ik~v~~v~~n~~ 158 (423)
T KOG0313|consen 99 LQCFLHDDWVSSVKGAS----------KWILTGSYDGTSRIWDL-------KG---KSIKTIVGHTGPIKSVAWVIKNSS 158 (423)
T ss_pred cccccchhhhhhhcccC----------ceEEEeecCCeeEEEec-------CC---ceEEEEecCCcceeeeEEEecCCc
Confidence 34456888888888772 69999999999999996 56 8899999999999998886523
Q ss_pred CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC----------
Q 046451 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK---------- 205 (719)
Q Consensus 136 ~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~---------- 205 (719)
...|++++.|.++++|.++.++.... ......+|+..|.+++...+| ..+++|+.|.+|.||+..+
T Consensus 159 ~~~fvsas~Dqtl~Lw~~~~~~~~~~---~~~~~~GHk~~V~sVsv~~sg-tr~~SgS~D~~lkiWs~~~~~~~~~E~~s 234 (423)
T KOG0313|consen 159 SCLFVSASMDQTLRLWKWNVGENKVK---ALKVCRGHKRSVDSVSVDSSG-TRFCSGSWDTMLKIWSVETDEEDELESSS 234 (423)
T ss_pred cceEEEecCCceEEEEEecCchhhhh---HHhHhcccccceeEEEecCCC-CeEEeecccceeeecccCCCccccccccc
Confidence 23699999999999999988776544 222334899999999999997 6999999999999999321
Q ss_pred ---------------CceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEE
Q 046451 206 ---------------QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAM 270 (719)
Q Consensus 206 ---------------~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v 270 (719)
+.++.++. +|...|.++.|++. ..+++++-|- +|+.||+.++. .+.++. ....++++
T Consensus 235 ~~rrk~~~~~~~~~~r~P~vtl~-GHt~~Vs~V~w~d~--~v~yS~SwDH---TIk~WDletg~-~~~~~~-~~ksl~~i 306 (423)
T KOG0313|consen 235 NRRRKKQKREKEGGTRTPLVTLE-GHTEPVSSVVWSDA--TVIYSVSWDH---TIKVWDLETGG-LKSTLT-TNKSLNCI 306 (423)
T ss_pred hhhhhhhhhhhcccccCceEEec-ccccceeeEEEcCC--CceEeecccc---eEEEEEeeccc-ceeeee-cCcceeEe
Confidence 12345555 89999999999985 4788999888 99999998864 344444 34678999
Q ss_pred EeCCCCCCeEEEEeCCCcEEEEECCCCe---EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCc-ccc-c
Q 046451 271 SWCPNDSSYLLTCAKDNRTICWDTVSGE---IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS-RYG-V 345 (719)
Q Consensus 271 ~~sp~d~~~l~sgs~Dg~I~iwd~~~~~---~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~-~~~-~ 345 (719)
.+++ ..++|++|+.|..|++||.+++. ....|.+|.++|.++.|+|...++|++++.|+++++||+++.+ .+. .
T Consensus 307 ~~~~-~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI 385 (423)
T KOG0313|consen 307 SYSP-LSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDI 385 (423)
T ss_pred eccc-ccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceee
Confidence 9999 89999999999999999998753 4677889999999999999999999999999999999999987 322 2
Q ss_pred CCCCCCCCCccCcceecCCCceeeeeCCcEEEEccC
Q 046451 346 GDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPK 381 (719)
Q Consensus 346 ~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~ 381 (719)
..+ ...+.+..|.+....++.|.|.++.+|...
T Consensus 386 ~~h---~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 386 AGH---NDKVLSVDWNEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred ccC---CceEEEEeccCCceEEeccCcceEEEeccc
Confidence 222 223456678888777888888888877643
No 70
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.95 E-value=1.3e-27 Score=238.04 Aligned_cols=280 Identities=17% Similarity=0.293 Sum_probs=229.3
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
|...|..+.|-++...|++|+.|..| ++|++........ ....+..+.|+++.|..++ .
T Consensus 174 h~gev~~v~~l~~sdtlatgg~Dr~I----------k~W~v~~~k~~~~---~tLaGs~g~it~~d~d~~~--------~ 232 (459)
T KOG0288|consen 174 HEGEVHDVEFLRNSDTLATGGSDRII----------KLWNVLGEKSELI---STLAGSLGNITSIDFDSDN--------K 232 (459)
T ss_pred cccccceeEEccCcchhhhcchhhhh----------hhhhcccchhhhh---hhhhccCCCcceeeecCCC--------c
Confidence 56789999999999999999988776 7888876542221 2224566789999999988 6
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
.+++.+.|+.+++|++ .+. ....+|.+|++.|+++.|.. +...+++|+.|.+|++||+....+..++ +
T Consensus 233 ~~iAas~d~~~r~Wnv------d~~---r~~~TLsGHtdkVt~ak~~~-~~~~vVsgs~DRtiK~WDl~k~~C~kt~--l 300 (459)
T KOG0288|consen 233 HVIAASNDKNLRLWNV------DSL---RLRHTLSGHTDKVTAAKFKL-SHSRVVSGSADRTIKLWDLQKAYCSKTV--L 300 (459)
T ss_pred eEEeecCCCceeeeec------cch---hhhhhhcccccceeeehhhc-cccceeeccccchhhhhhhhhhheeccc--c
Confidence 8888899999999999 455 88899999999999999987 4455999999999999999998877665 2
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
. .+.+.+|+.+. ..+++|-.|++|++||+++..+..... ..+.|+++..+.++. .+++++.|+ ++
T Consensus 301 ~------~S~cnDI~~~~---~~~~SgH~DkkvRfwD~Rs~~~~~sv~--~gg~vtSl~ls~~g~-~lLsssRDd---tl 365 (459)
T KOG0288|consen 301 P------GSQCNDIVCSI---SDVISGHFDKKVRFWDIRSADKTRSVP--LGGRVTSLDLSMDGL-ELLSSSRDD---TL 365 (459)
T ss_pred c------cccccceEecc---eeeeecccccceEEEeccCCceeeEee--cCcceeeEeeccCCe-EEeeecCCC---ce
Confidence 2 22455566552 478899999999999999999999887 566999999999985 566667777 89
Q ss_pred EEEecCCCCCceEEeeC----CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCC--CeEEeEEcCCC
Q 046451 246 RLWDMRNTMSPVKEFVG----HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTN--WNFDIHWYPKI 319 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~~----h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~--~v~~l~~spdg 319 (719)
.++|+++. .....+.. .....+.+.||| ++.|+++|+.||.|+||++.++++...+..... .|+++.|++.|
T Consensus 366 ~viDlRt~-eI~~~~sA~g~k~asDwtrvvfSp-d~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG 443 (459)
T KOG0288|consen 366 KVIDLRTK-EIRQTFSAEGFKCASDWTRVVFSP-DGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSG 443 (459)
T ss_pred eeeecccc-cEEEEeeccccccccccceeEECC-CCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCC
Confidence 99999975 44444432 123478999999 999999999999999999999999888875444 59999999999
Q ss_pred CCEEEEEeCCCcEEEEe
Q 046451 320 PGVISASSFDGKIGIYN 336 (719)
Q Consensus 320 ~~~las~s~Dg~I~iwd 336 (719)
..|++++.++.+.+|.
T Consensus 444 -~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 444 -SGLLSADKQKAVTLWT 459 (459)
T ss_pred -chhhcccCCcceEecC
Confidence 7888899999999994
No 71
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=4.9e-27 Score=233.56 Aligned_cols=290 Identities=17% Similarity=0.214 Sum_probs=233.9
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
..|.++|+-+.||++| ++||+++.|.+..+|++. .....+..+++.+|...|.-+.|+| |.++|+
T Consensus 221 ~~htdEVWfl~FS~nG--------kyLAsaSkD~Taiiw~v~------~d~~~kl~~tlvgh~~~V~yi~wSP-DdryLl 285 (519)
T KOG0293|consen 221 QDHTDEVWFLQFSHNG--------KYLASASKDSTAIIWIVV------YDVHFKLKKTLVGHSQPVSYIMWSP-DDRYLL 285 (519)
T ss_pred hhCCCcEEEEEEcCCC--------eeEeeccCCceEEEEEEe------cCcceeeeeeeecccCceEEEEECC-CCCeEE
Confidence 5699999999999999 899999999999999983 2323477889999999999999999 789999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
+|+.|..+.+||+.++.....+. .++...+.+++|.||| ..+++|+.|+.|..||+.. +.+..........|
T Consensus 286 aCg~~e~~~lwDv~tgd~~~~y~------~~~~~S~~sc~W~pDg-~~~V~Gs~dr~i~~wdlDg-n~~~~W~gvr~~~v 357 (519)
T KOG0293|consen 286 ACGFDEVLSLWDVDTGDLRHLYP------SGLGFSVSSCAWCPDG-FRFVTGSPDRTIIMWDLDG-NILGNWEGVRDPKV 357 (519)
T ss_pred ecCchHheeeccCCcchhhhhcc------cCcCCCcceeEEccCC-ceeEecCCCCcEEEecCCc-chhhccccccccee
Confidence 99999999999999998876541 2245688999999998 5799999999999999984 44455543345679
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEE
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV 300 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~ 300 (719)
.+++.++||+++++++ .|. .|++|+..+.. .+. +......|++++.|. |++++++.-.+..|++||+...+.+
T Consensus 358 ~dlait~Dgk~vl~v~-~d~---~i~l~~~e~~~-dr~-lise~~~its~~iS~-d~k~~LvnL~~qei~LWDl~e~~lv 430 (519)
T KOG0293|consen 358 HDLAITYDGKYVLLVT-VDK---KIRLYNREARV-DRG-LISEEQPITSFSISK-DGKLALVNLQDQEIHLWDLEENKLV 430 (519)
T ss_pred EEEEEcCCCcEEEEEe-ccc---ceeeechhhhh-hhc-cccccCceeEEEEcC-CCcEEEEEcccCeeEEeecchhhHH
Confidence 9999999997666666 444 69999987642 222 333456899999998 9999999999999999999998899
Q ss_pred EEecCCCCC--eEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCC--CceeeeeCCcEE
Q 046451 301 SELPAGTNW--NFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRP--AGASFGFGGKLV 376 (719)
Q Consensus 301 ~~l~~h~~~--v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~--~~~s~s~~Gklv 376 (719)
..+.+|... |-.-+|--.+..++++||+|++|+||+..+++++........ .++...|.+.. ..++.|-||++.
T Consensus 431 ~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~--~vNcVswNP~~p~m~ASasDDgtIR 508 (519)
T KOG0293|consen 431 RKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSK--TVNCVSWNPADPEMFASASDDGTIR 508 (519)
T ss_pred HHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcc--eeeEEecCCCCHHHhhccCCCCeEE
Confidence 999888753 444466655557999999999999999999999874433322 23677787764 457888899999
Q ss_pred EEccCC
Q 046451 377 SFHPKS 382 (719)
Q Consensus 377 ~~~~~~ 382 (719)
+|+...
T Consensus 509 IWg~~~ 514 (519)
T KOG0293|consen 509 IWGPSD 514 (519)
T ss_pred EecCCc
Confidence 998764
No 72
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.2e-26 Score=245.51 Aligned_cols=280 Identities=19% Similarity=0.340 Sum_probs=231.2
Q ss_pred eEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEc
Q 046451 12 SVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGL 91 (719)
Q Consensus 12 ~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs 91 (719)
-+.|| ..+.||+|. +..+++|+...+.... +..++ .+.|+++.|+++| .+|++|.
T Consensus 182 lldWs-s~n~laVal-----------g~~vylW~~~s~~v~~----l~~~~-~~~vtSv~ws~~G--------~~LavG~ 236 (484)
T KOG0305|consen 182 LLDWS-SANVLAVAL-----------GQSVYLWSASSGSVTE----LCSFG-EELVTSVKWSPDG--------SHLAVGT 236 (484)
T ss_pred Hhhcc-cCCeEEEEe-----------cceEEEEecCCCceEE----eEecC-CCceEEEEECCCC--------CEEEEee
Confidence 46677 455777773 4456899887654221 22222 8899999999999 7999999
Q ss_pred CCCcEEEEcCCccccCCCCCCCCceeeecc-ccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCC
Q 046451 92 VDGSIDIWNPLSLISSGETGGNPLIAHLSR-HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGS 170 (719)
Q Consensus 92 ~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~-h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~ 170 (719)
.+|.|.|||. .+. +.+..+.+ |...|-+++|+ ...+.+|+.|+.|.++|++..+.... ...
T Consensus 237 ~~g~v~iwD~------~~~---k~~~~~~~~h~~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~~~~------~~~ 298 (484)
T KOG0305|consen 237 SDGTVQIWDV------KEQ---KKTRTLRGSHASRVGSLAWN---SSVLSSGSRDGKILNHDVRISQHVVS------TLQ 298 (484)
T ss_pred cCCeEEEEeh------hhc---cccccccCCcCceeEEEecc---CceEEEecCCCcEEEEEEecchhhhh------hhh
Confidence 9999999998 444 66777777 99999999995 58899999999999999998776533 245
Q ss_pred CCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEec
Q 046451 171 AAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDM 250 (719)
Q Consensus 171 ~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl 250 (719)
+|...|..+.|++++ .+|++|+.|+.+.|||....+++..+. .|...|..++|+|....+|++|+.. .+++|++||.
T Consensus 299 ~H~qeVCgLkws~d~-~~lASGgnDN~~~Iwd~~~~~p~~~~~-~H~aAVKA~awcP~q~~lLAsGGGs-~D~~i~fwn~ 375 (484)
T KOG0305|consen 299 GHRQEVCGLKWSPDG-NQLASGGNDNVVFIWDGLSPEPKFTFT-EHTAAVKALAWCPWQSGLLATGGGS-ADRCIKFWNT 375 (484)
T ss_pred cccceeeeeEECCCC-CeeccCCCccceEeccCCCccccEEEe-ccceeeeEeeeCCCccCceEEcCCC-cccEEEEEEc
Confidence 688999999999997 699999999999999998888888888 8999999999999988888887754 3459999999
Q ss_pred CCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe-CCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCC
Q 046451 251 RNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA-KDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFD 329 (719)
Q Consensus 251 ~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~D 329 (719)
.++ ..+..+. ....|.+|.|++..++++.+-+ .++.|.||++.+.+.+..+.+|...|..++++||| ..|++|+.|
T Consensus 376 ~~g-~~i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg-~~i~t~a~D 452 (484)
T KOG0305|consen 376 NTG-ARIDSVD-TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDG-ETIVTGAAD 452 (484)
T ss_pred CCC-cEecccc-cCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCC-CEEEEeccc
Confidence 865 4454443 4578999999994444444433 57799999999999999999999999999999999 799999999
Q ss_pred CcEEEEeCCCC
Q 046451 330 GKIGIYNIEGC 340 (719)
Q Consensus 330 g~I~iwd~~~~ 340 (719)
.++++|++-+.
T Consensus 453 ETlrfw~~f~~ 463 (484)
T KOG0305|consen 453 ETLRFWNLFDE 463 (484)
T ss_pred CcEEeccccCC
Confidence 99999999885
No 73
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.95 E-value=1.1e-27 Score=234.84 Aligned_cols=286 Identities=19% Similarity=0.316 Sum_probs=236.1
Q ss_pred cccCccceEEEcCCC-CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 5 KGINRSASVAFAPDA-PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 5 ~~~~~V~~vafSpdg-~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
.|.+.|.|++=+|.. ..+|+|+.||.| +|||+....+...+ ..|.+-|..|++..+
T Consensus 64 gHrdGV~~lakhp~~ls~~aSGs~DG~V----------kiWnlsqR~~~~~f-----~AH~G~V~Gi~v~~~-------- 120 (433)
T KOG0268|consen 64 GHRDGVSCLAKHPNKLSTVASGSCDGEV----------KIWNLSQRECIRTF-----KAHEGLVRGICVTQT-------- 120 (433)
T ss_pred ccccccchhhcCcchhhhhhccccCceE----------EEEehhhhhhhhee-----ecccCceeeEEeccc--------
Confidence 466889999999987 789999999987 89999977665554 458899999999873
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
.+++++.|.+|+.|.++ + ..+.++.+ +..+.+|.-+. .++.+++|+. .|.|||......+..+
T Consensus 121 --~~~tvgdDKtvK~wk~~-------~---~p~~tilg-~s~~~gIdh~~-~~~~FaTcGe--~i~IWD~~R~~Pv~sm- 183 (433)
T KOG0268|consen 121 --SFFTVGDDKTVKQWKID-------G---PPLHTILG-KSVYLGIDHHR-KNSVFATCGE--QIDIWDEQRDNPVSSM- 183 (433)
T ss_pred --ceEEecCCcceeeeecc-------C---Ccceeeec-ccccccccccc-ccccccccCc--eeeecccccCCcccee-
Confidence 58888899999999974 2 34444443 45667777776 5678898886 4999999877766553
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~ 243 (719)
.. ..+.|.++.|+|....+|++|.+|+.|.|||++.+.++..+. ....-+.|+|+|++ ..|+++..|.
T Consensus 184 --sw----G~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi--~~mRTN~IswnPea-fnF~~a~ED~--- 251 (433)
T KOG0268|consen 184 --SW----GADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVI--LTMRTNTICWNPEA-FNFVAANEDH--- 251 (433)
T ss_pred --ec----CCCceeEEecCCCcchheeeeccCCceEEEecccCCccceee--eeccccceecCccc-cceeeccccc---
Confidence 22 234799999999988889999999999999999999988876 67778899999965 6788888887
Q ss_pred cEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC-CCCCeEEeEEcCCCCCE
Q 046451 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA-GTNWNFDIHWYPKIPGV 322 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~-h~~~v~~l~~spdg~~~ 322 (719)
.++.||++....++..+.+|.+.|.++.||| -|.-|++||.|.+|+||..+.+.....+.. .-..|+++.||-|. .+
T Consensus 252 nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsp-tG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Ds-ky 329 (433)
T KOG0268|consen 252 NLYTYDMRNLSRPLNVHKDHVSAVMDVDFSP-TGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDS-KY 329 (433)
T ss_pred cceehhhhhhcccchhhcccceeEEEeccCC-CcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccc-cE
Confidence 8999999999999999999999999999999 899999999999999999987765443321 12359999999998 89
Q ss_pred EEEEeCCCcEEEEeCCCCcccc
Q 046451 323 ISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 323 las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+++||+|+.|++|.....+..+
T Consensus 330 i~SGSdd~nvRlWka~Aseklg 351 (433)
T KOG0268|consen 330 IISGSDDGNVRLWKAKASEKLG 351 (433)
T ss_pred EEecCCCcceeeeecchhhhcC
Confidence 9999999999999988776654
No 74
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.95 E-value=1.2e-26 Score=218.55 Aligned_cols=282 Identities=17% Similarity=0.250 Sum_probs=230.8
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
..+|...|.+++|+-+| ..|++|+.|+++.+|+++.. .........+|.+.|..++|++...++|
T Consensus 16 ~~~~~~~v~Sv~wn~~g--------~~lasgs~dktv~v~n~e~~-------r~~~~~~~~gh~~svdql~w~~~~~d~~ 80 (313)
T KOG1407|consen 16 LQGHVQKVHSVAWNCDG--------TKLASGSFDKTVSVWNLERD-------RFRKELVYRGHTDSVDQLCWDPKHPDLF 80 (313)
T ss_pred hhhhhhcceEEEEcccC--------ceeeecccCCceEEEEecch-------hhhhhhcccCCCcchhhheeCCCCCcce
Confidence 35678899999999999 79999999999999998542 1133445678999999999999889999
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR 219 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~ 219 (719)
++++.|.+|++||++..+....+. .+.+-.-+.|+|+| .++++++.|..|.+.|.++.+.+.... ....
T Consensus 81 atas~dk~ir~wd~r~~k~~~~i~--------~~~eni~i~wsp~g-~~~~~~~kdD~it~id~r~~~~~~~~~--~~~e 149 (313)
T KOG1407|consen 81 ATASGDKTIRIWDIRSGKCTARIE--------TKGENINITWSPDG-EYIAVGNKDDRITFIDARTYKIVNEEQ--FKFE 149 (313)
T ss_pred EEecCCceEEEEEeccCcEEEEee--------ccCcceEEEEcCCC-CEEEEecCcccEEEEEecccceeehhc--ccce
Confidence 999999999999999998775531 12244568899998 488999999999999999998887776 6778
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI 299 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~ 299 (719)
+..++|+.++. +|+.....| +|.|...-.. +++..+..|.....||.|+| +|++|++|+.|-.+.+||+...-+
T Consensus 150 ~ne~~w~~~nd-~Fflt~GlG---~v~ILsypsL-kpv~si~AH~snCicI~f~p-~GryfA~GsADAlvSLWD~~ELiC 223 (313)
T KOG1407|consen 150 VNEISWNNSND-LFFLTNGLG---CVEILSYPSL-KPVQSIKAHPSNCICIEFDP-DGRYFATGSADALVSLWDVDELIC 223 (313)
T ss_pred eeeeeecCCCC-EEEEecCCc---eEEEEecccc-ccccccccCCcceEEEEECC-CCceEeeccccceeeccChhHhhh
Confidence 88999997765 455544444 8999988754 78899999999999999999 999999999999999999998888
Q ss_pred EEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEc
Q 046451 300 VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFH 379 (719)
Q Consensus 300 ~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~ 379 (719)
++.+.-+.=.|..|+||.|| ++||++|+|..|-|=++++|..+...... +.... ++|.+...|++|.
T Consensus 224 ~R~isRldwpVRTlSFS~dg-~~lASaSEDh~IDIA~vetGd~~~eI~~~---~~t~t---------VAWHPk~~LLAyA 290 (313)
T KOG1407|consen 224 ERCISRLDWPVRTLSFSHDG-RMLASASEDHFIDIAEVETGDRVWEIPCE---GPTFT---------VAWHPKRPLLAYA 290 (313)
T ss_pred heeeccccCceEEEEeccCc-ceeeccCccceEEeEecccCCeEEEeecc---CCcee---------EEecCCCceeeEE
Confidence 89998888899999999999 89999999999999999999876533222 11233 4555556666666
Q ss_pred cCCCCCc
Q 046451 380 PKSSAGH 386 (719)
Q Consensus 380 ~~~~~~~ 386 (719)
.++..++
T Consensus 291 ~ddk~~d 297 (313)
T KOG1407|consen 291 CDDKDGD 297 (313)
T ss_pred ecCCCCc
Confidence 6666553
No 75
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.3e-25 Score=217.91 Aligned_cols=283 Identities=14% Similarity=0.254 Sum_probs=222.8
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
.++|.++.|+.+|.+|++++.|.. ++|||...+.....+ ..++..|..++|.... ..
T Consensus 14 ~~~i~sl~fs~~G~~litss~dDs----------l~LYd~~~g~~~~ti-----~skkyG~~~~~Fth~~--------~~ 70 (311)
T KOG1446|consen 14 NGKINSLDFSDDGLLLITSSEDDS----------LRLYDSLSGKQVKTI-----NSKKYGVDLACFTHHS--------NT 70 (311)
T ss_pred CCceeEEEecCCCCEEEEecCCCe----------EEEEEcCCCceeeEe-----ecccccccEEEEecCC--------ce
Confidence 478999999999999999876554 489999876655444 3356788888887765 45
Q ss_pred EEEEcC--CCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 87 VAGGLV--DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 87 lasgs~--dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
++.++. |.+|+..++ .+. +.++.+.+|...|.+|+.+| .++.+++++.|++|++||++..++...+
T Consensus 71 ~i~sStk~d~tIryLsl------~dN---kylRYF~GH~~~V~sL~~sP-~~d~FlS~S~D~tvrLWDlR~~~cqg~l-- 138 (311)
T KOG1446|consen 71 VIHSSTKEDDTIRYLSL------HDN---KYLRYFPGHKKRVNSLSVSP-KDDTFLSSSLDKTVRLWDLRVKKCQGLL-- 138 (311)
T ss_pred EEEccCCCCCceEEEEe------ecC---ceEEEcCCCCceEEEEEecC-CCCeEEecccCCeEEeeEecCCCCceEE--
Confidence 555554 889999999 556 89999999999999999999 5699999999999999999977765443
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC--ceeEEec--CCCCCceeEEEECCCCCcEEEEEeCCC
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ--KPVISFS--ESIKRRCSVLQWNPDVATQLVVASDED 240 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~--~~~~~~~--~~~~~~i~~l~~sp~g~~~l~~~s~d~ 240 (719)
+...-..++|+|.| -++|++...+.|++||+|.- .+..+|. .......+.|.|++||+.+|++. ..+
T Consensus 139 -------~~~~~pi~AfDp~G-LifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT-~~s 209 (311)
T KOG1446|consen 139 -------NLSGRPIAAFDPEG-LIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLST-NAS 209 (311)
T ss_pred -------ecCCCcceeECCCC-cEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEe-CCC
Confidence 11233467899997 58888888789999999974 3444443 24567889999999997555544 444
Q ss_pred CCCcEEEEecCCCCCceEEeeCCCCCe---eEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC-CCCCeEEeEEc
Q 046451 241 SSPALRLWDMRNTMSPVKEFVGHTKGV---IAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA-GTNWNFDIHWY 316 (719)
Q Consensus 241 ~~~~I~lwDl~~~~~~~~~~~~h~~~V---~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~-h~~~v~~l~~s 316 (719)
.+++.|.-++ ..+.++.++...- .+.+|.| |++++++|+.||+|.+|++++|+.+..+.+ +...+.++.|+
T Consensus 210 ---~~~~lDAf~G-~~~~tfs~~~~~~~~~~~a~ftP-ds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fn 284 (311)
T KOG1446|consen 210 ---FIYLLDAFDG-TVKSTFSGYPNAGNLPLSATFTP-DSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFN 284 (311)
T ss_pred ---cEEEEEccCC-cEeeeEeeccCCCCcceeEEECC-CCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccC
Confidence 7999998776 5677777665433 5788999 999999999999999999999999999998 68889999999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 317 PKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 317 pdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
|.- ..++++ +..+.+|-....+
T Consensus 285 P~~-~mf~sa--~s~l~fw~p~~~~ 306 (311)
T KOG1446|consen 285 PRY-AMFVSA--SSNLVFWLPDEDA 306 (311)
T ss_pred Cce-eeeeec--CceEEEEeccccc
Confidence 986 455554 5788888765443
No 76
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.95 E-value=3.1e-26 Score=216.41 Aligned_cols=246 Identities=13% Similarity=0.289 Sum_probs=212.3
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
..+|+..++.|.|+.+| ++|++++.|..+.||-- .++ +.+-++.+|.+.|+|++.+. +.++|
T Consensus 6 l~GHERplTqiKyN~eG--------DLlFscaKD~~~~vw~s------~nG---erlGty~GHtGavW~~Did~-~s~~l 67 (327)
T KOG0643|consen 6 LQGHERPLTQIKYNREG--------DLLFSCAKDSTPTVWYS------LNG---ERLGTYDGHTGAVWCCDIDW-DSKHL 67 (327)
T ss_pred cccCccccceEEecCCC--------cEEEEecCCCCceEEEe------cCC---ceeeeecCCCceEEEEEecC-Cccee
Confidence 35799999999999999 79999999999999986 567 88999999999999999998 78999
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC-----CCcEEEEECC-------CCc
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY-----NGTTVVWDLK-------KQK 207 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~-----dg~I~iwd~~-------~~~ 207 (719)
++|+.|.++++||+.+++.+..+ + ....|..+.|+.+| ++++.+.+ .+.|.++|++ ..+
T Consensus 68 iTGSAD~t~kLWDv~tGk~la~~---k-----~~~~Vk~~~F~~~g-n~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~e 138 (327)
T KOG0643|consen 68 ITGSADQTAKLWDVETGKQLATW---K-----TNSPVKRVDFSFGG-NLILASTDKQMGYTCFVSVFDIRDDSSDIDSEE 138 (327)
T ss_pred eeccccceeEEEEcCCCcEEEEe---e-----cCCeeEEEeeccCC-cEEEEEehhhcCcceEEEEEEccCChhhhcccC
Confidence 99999999999999999987663 2 24489999999997 45555543 3689999998 445
Q ss_pred eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCC
Q 046451 208 PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDN 287 (719)
Q Consensus 208 ~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg 287 (719)
+...+. .+...++.+-|.+-++ .|++|..++ .|.+||++++.+.+.....|...|+++++++ |..++++++.|.
T Consensus 139 p~~kI~-t~~skit~a~Wg~l~~-~ii~Ghe~G---~is~~da~~g~~~v~s~~~h~~~Ind~q~s~-d~T~FiT~s~Dt 212 (327)
T KOG0643|consen 139 PYLKIP-TPDSKITSALWGPLGE-TIIAGHEDG---SISIYDARTGKELVDSDEEHSSKINDLQFSR-DRTYFITGSKDT 212 (327)
T ss_pred ceEEec-CCccceeeeeecccCC-EEEEecCCC---cEEEEEcccCceeeechhhhccccccccccC-CcceEEecccCc
Confidence 566776 6779999999999984 788898888 8999999998777888888999999999999 999999999999
Q ss_pred cEEEEECCCCeEE-------------------------------------------------------EEecCCCCCeEE
Q 046451 288 RTICWDTVSGEIV-------------------------------------------------------SELPAGTNWNFD 312 (719)
Q Consensus 288 ~I~iwd~~~~~~~-------------------------------------------------------~~l~~h~~~v~~ 312 (719)
+-++||..+.+.+ ..+++|-+.|++
T Consensus 213 takl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINs 292 (327)
T KOG0643|consen 213 TAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINS 292 (327)
T ss_pred cceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcce
Confidence 9999998764433 223467889999
Q ss_pred eEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 313 IHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 313 l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
++|+|+| ...++|++||.|+|..++.
T Consensus 293 vAfhPdG-ksYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 293 VAFHPDG-KSYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred eEECCCC-cccccCCCCceEEEEEecc
Confidence 9999999 7999999999999987654
No 77
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.95 E-value=2.4e-26 Score=232.65 Aligned_cols=265 Identities=23% Similarity=0.385 Sum_probs=213.2
Q ss_pred cccccCccceEEEcCCCC-eEEEeeccceeecccCCCceEEEEEeeccCCcccc-----eeecccCCCCCceeeeecCCC
Q 046451 3 CIKGINRSASVAFAPDAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDL-----LLVGESPSSERFNRLAWGKNG 76 (719)
Q Consensus 3 ~l~~~~~V~~vafSpdg~-~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~-----~~~~~~~~~~~V~~l~~sp~g 76 (719)
++.|.+.|+.+++.|... +||+++..+.| .|||+......... .-....+|...-++|+|++..
T Consensus 120 ~i~h~gEVnRaRymPQnp~iVAt~t~~~dv----------~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~ 189 (422)
T KOG0264|consen 120 KINHDGEVNRARYMPQNPNIVATKTSSGDV----------YVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQ 189 (422)
T ss_pred eccCCccchhhhhCCCCCcEEEecCCCCCE----------EEEEeccCCCcccccccCCCceEEEeeccccccccccccc
Confidence 466778899999999764 66667655554 88998754333221 012335577777889999986
Q ss_pred CCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCC
Q 046451 77 SGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAP 156 (719)
Q Consensus 77 ~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~ 156 (719)
. ..|++++.|+.|++||+..... +.........+.+|...|.+++|++.+.++|++++.|+.+.|||+++.
T Consensus 190 ~-------g~Lls~~~d~~i~lwdi~~~~~--~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~ 260 (422)
T KOG0264|consen 190 E-------GTLLSGSDDHTICLWDINAESK--EDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN 260 (422)
T ss_pred c-------eeEeeccCCCcEEEEecccccc--CCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC
Confidence 5 7999999999999999964332 122235667889999999999999999999999999999999999973
Q ss_pred CCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC-ceeEEecCCCCCceeEEEECCCCCcEEEE
Q 046451 157 AEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ-KPVISFSESIKRRCSVLQWNPDVATQLVV 235 (719)
Q Consensus 157 ~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~~l~~ 235 (719)
. .. ......+|.+.|+|++|+|.++.+||+|+.|++|.+||+|+- +++.++. +|...|.+|.|+|+.+.+|++
T Consensus 261 ~--~~---~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e-~H~dev~~V~WSPh~etvLAS 334 (422)
T KOG0264|consen 261 T--SK---PSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFE-GHEDEVFQVEWSPHNETVLAS 334 (422)
T ss_pred C--CC---CcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceecc-CCCcceEEEEeCCCCCceeEe
Confidence 1 11 333456789999999999999999999999999999999985 4667777 899999999999999999999
Q ss_pred EeCCCCCCcEEEEecCCCCC-------------ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 236 ASDEDSSPALRLWDMRNTMS-------------PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 236 ~s~d~~~~~I~lwDl~~~~~-------------~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
++.|+ .+.+||+..-.+ ++....||...|..+.|+|+..-.|++.++|+.+.||+..
T Consensus 335 Sg~D~---rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 335 SGTDR---RLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred cccCC---cEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 99998 899999965322 3456678999999999999777788999999999999874
No 78
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=6.3e-25 Score=213.27 Aligned_cols=280 Identities=18% Similarity=0.274 Sum_probs=225.1
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasg 142 (719)
....|++|.|+.+| .+|++++.|.+++|||. .++ +..+++..++-.|..++|.. ..+.++.+
T Consensus 13 ~~~~i~sl~fs~~G--------~~litss~dDsl~LYd~------~~g---~~~~ti~skkyG~~~~~Fth-~~~~~i~s 74 (311)
T KOG1446|consen 13 TNGKINSLDFSDDG--------LLLITSSEDDSLRLYDS------LSG---KQVKTINSKKYGVDLACFTH-HSNTVIHS 74 (311)
T ss_pred CCCceeEEEecCCC--------CEEEEecCCCeEEEEEc------CCC---ceeeEeecccccccEEEEec-CCceEEEc
Confidence 57889999999999 78999999999999999 667 88888888888899999987 45666666
Q ss_pred eC--CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 143 AD--DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 143 s~--dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
+. |.+|+..++.+.+.++.| .+|...|++|+.+|.+ ..+++++.|++|++||++..++...+. ...-
T Consensus 75 Stk~d~tIryLsl~dNkylRYF-------~GH~~~V~sL~~sP~~-d~FlS~S~D~tvrLWDlR~~~cqg~l~---~~~~ 143 (311)
T KOG1446|consen 75 STKEDDTIRYLSLHDNKYLRYF-------PGHKKRVNSLSVSPKD-DTFLSSSLDKTVRLWDLRVKKCQGLLN---LSGR 143 (311)
T ss_pred cCCCCCceEEEEeecCceEEEc-------CCCCceEEEEEecCCC-CeEEecccCCeEEeeEecCCCCceEEe---cCCC
Confidence 66 889999999999887764 4688999999999997 699999999999999999888877665 2333
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCC-CCceEEee---CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNT-MSPVKEFV---GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~-~~~~~~~~---~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~ 296 (719)
..++|+|+| .+++++...+ .|+|||+|.- +.+..++. ....+.+.|.||+ ||++|+.++..+.+++.|.-+
T Consensus 144 pi~AfDp~G-LifA~~~~~~---~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~-dGK~iLlsT~~s~~~~lDAf~ 218 (311)
T KOG1446|consen 144 PIAAFDPEG-LIFALANGSE---LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSP-DGKSILLSTNASFIYLLDAFD 218 (311)
T ss_pred cceeECCCC-cEEEEecCCC---eEEEEEecccCCCCceeEccCCCCccceeeeEEcC-CCCEEEEEeCCCcEEEEEccC
Confidence 457999998 5777777766 8999999975 34555554 3356889999999 999999999999999999999
Q ss_pred CeEEEEecCCCCCe---EEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCC
Q 046451 297 GEIVSELPAGTNWN---FDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGG 373 (719)
Q Consensus 297 ~~~~~~l~~h~~~v---~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~G 373 (719)
|..+.++..+.+.- .+.+|+||+ +++++|+.||+|++|+++++..+...... ........+|. |....|...+
T Consensus 219 G~~~~tfs~~~~~~~~~~~a~ftPds-~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~-~~~~~~~~~fn--P~~~mf~sa~ 294 (311)
T KOG1446|consen 219 GTVKSTFSGYPNAGNLPLSATFTPDS-KFVLSGSDDGTIHVWNLETGKKVAVLRGP-NGGPVSCVRFN--PRYAMFVSAS 294 (311)
T ss_pred CcEeeeEeeccCCCCcceeEEECCCC-cEEEEecCCCcEEEEEcCCCcEeeEecCC-CCCCccccccC--CceeeeeecC
Confidence 99999988765432 678999999 89999999999999999999988855543 22233445554 4455565555
Q ss_pred cEEEEcc
Q 046451 374 KLVSFHP 380 (719)
Q Consensus 374 klv~~~~ 380 (719)
..+.|+.
T Consensus 295 s~l~fw~ 301 (311)
T KOG1446|consen 295 SNLVFWL 301 (311)
T ss_pred ceEEEEe
Confidence 5555543
No 79
>PTZ00421 coronin; Provisional
Probab=99.94 E-value=6.9e-25 Score=240.87 Aligned_cols=220 Identities=20% Similarity=0.319 Sum_probs=174.5
Q ss_pred eeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC
Q 046451 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG 196 (719)
Q Consensus 117 ~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg 196 (719)
..+.+|.+.|.+++|++.++++|++|+.|++|+|||+.+...............+|...|.+++|++++.++|++++.|+
T Consensus 69 ~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dg 148 (493)
T PTZ00421 69 PILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADM 148 (493)
T ss_pred ceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCC
Confidence 35788999999999999778899999999999999998754221111111223568889999999998767999999999
Q ss_pred cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCC-eeEEEeCCC
Q 046451 197 TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKG-VIAMSWCPN 275 (719)
Q Consensus 197 ~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~-V~~v~~sp~ 275 (719)
+|+|||+++++.+..+. .|...|.+++|+++| .+|++++.|+ .|+|||++++ ..+..+.+|.+. +..+.|.+
T Consensus 149 tVrIWDl~tg~~~~~l~-~h~~~V~sla~spdG-~lLatgs~Dg---~IrIwD~rsg-~~v~tl~~H~~~~~~~~~w~~- 221 (493)
T PTZ00421 149 VVNVWDVERGKAVEVIK-CHSDQITSLEWNLDG-SLLCTTSKDK---KLNIIDPRDG-TIVSSVEAHASAKSQRCLWAK- 221 (493)
T ss_pred EEEEEECCCCeEEEEEc-CCCCceEEEEEECCC-CEEEEecCCC---EEEEEECCCC-cEEEEEecCCCCcceEEEEcC-
Confidence 99999999999888887 788999999999998 5889999998 9999999986 567788888764 45678888
Q ss_pred CCCeEEEEe----CCCcEEEEECCCCe-EEEEecCC-CCCeEEeEEcCCCCCEEEEEe-CCCcEEEEeCCCCcccc
Q 046451 276 DSSYLLTCA----KDNRTICWDTVSGE-IVSELPAG-TNWNFDIHWYPKIPGVISASS-FDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 276 d~~~l~sgs----~Dg~I~iwd~~~~~-~~~~l~~h-~~~v~~l~~spdg~~~las~s-~Dg~I~iwd~~~~~~~~ 344 (719)
++..|++++ .|+.|+|||+++.. .+..+..+ ...+....|++++ .+|++++ .|+.|++||+.+++.+.
T Consensus 222 ~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~-~~L~lggkgDg~Iriwdl~~~~~~~ 296 (493)
T PTZ00421 222 RKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDT-NLLYIGSKGEGNIRCFELMNERLTF 296 (493)
T ss_pred CCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCC-CEEEEEEeCCCeEEEEEeeCCceEE
Confidence 666666654 47899999998754 33333323 3456667899998 6777666 59999999999887654
No 80
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.94 E-value=1.9e-25 Score=223.87 Aligned_cols=284 Identities=18% Similarity=0.281 Sum_probs=235.2
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
...+.++..++....++||+.|..+ .++|...+... ....+|...|+++.|+++. ..
T Consensus 219 ~pgi~ald~~~s~~~ilTGG~d~~a----------v~~d~~s~q~l-----~~~~Gh~kki~~v~~~~~~--------~~ 275 (506)
T KOG0289|consen 219 TPGITALDIIPSSSKILTGGEDKTA----------VLFDKPSNQIL-----ATLKGHTKKITSVKFHKDL--------DT 275 (506)
T ss_pred CCCeeEEeecCCCCcceecCCCCce----------EEEecchhhhh-----hhccCcceEEEEEEeccch--------hh
Confidence 3456777777777889999877554 67887754432 3346799999999999997 78
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCcc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~ 166 (719)
+++++.|..|+||.. ... ........|.+.|+.+..++ .+.||++++.||...+.|++++.......
T Consensus 276 v~~aSad~~i~vws~------~~~---s~~~~~~~h~~~V~~ls~h~-tgeYllsAs~d~~w~Fsd~~~g~~lt~vs--- 342 (506)
T KOG0289|consen 276 VITASADEIIRVWSV------PLS---SEPTSSRPHEEPVTGLSLHP-TGEYLLSASNDGTWAFSDISSGSQLTVVS--- 342 (506)
T ss_pred eeecCCcceEEeecc------ccc---cCccccccccccceeeeecc-CCcEEEEecCCceEEEEEccCCcEEEEEe---
Confidence 999999999999998 333 45566778999999999999 89999999999999999999988764421
Q ss_pred CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEE
Q 046451 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALR 246 (719)
Q Consensus 167 ~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~ 246 (719)
.....-.+++.+|+||| .+|.+|..||.|+|||+.++..+..|. +|.+.|..|+|+.+| ++++++.+|+ .|+
T Consensus 343 --~~~s~v~~ts~~fHpDg-Lifgtgt~d~~vkiwdlks~~~~a~Fp-ght~~vk~i~FsENG-Y~Lat~add~---~V~ 414 (506)
T KOG0289|consen 343 --DETSDVEYTSAAFHPDG-LIFGTGTPDGVVKIWDLKSQTNVAKFP-GHTGPVKAISFSENG-YWLATAADDG---SVK 414 (506)
T ss_pred --eccccceeEEeeEcCCc-eEEeccCCCceEEEEEcCCccccccCC-CCCCceeEEEeccCc-eEEEEEecCC---eEE
Confidence 11223469999999997 799999999999999999999999999 799999999999998 8999999998 899
Q ss_pred EEecCCCCCceEEeeC-CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC--CCeEEEEecCCCCCeEEeEEcCCCCCEE
Q 046451 247 LWDMRNTMSPVKEFVG-HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV--SGEIVSELPAGTNWNFDIHWYPKIPGVI 323 (719)
Q Consensus 247 lwDl~~~~~~~~~~~~-h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~--~~~~~~~l~~h~~~v~~l~~spdg~~~l 323 (719)
+||+|+.. ..+++.. ...+|.+++|.. .|.+|++++.|=+|++++-. ++.++.++..|.+..+++.|..+. .++
T Consensus 415 lwDLRKl~-n~kt~~l~~~~~v~s~~fD~-SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~a-q~l 491 (506)
T KOG0289|consen 415 LWDLRKLK-NFKTIQLDEKKEVNSLSFDQ-SGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHA-QYL 491 (506)
T ss_pred EEEehhhc-ccceeeccccccceeEEEcC-CCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccc-eEE
Confidence 99999863 4444443 334799999998 89999999888777777733 567888888898888999999887 899
Q ss_pred EEEeCCCcEEEEeC
Q 046451 324 SASSFDGKIGIYNI 337 (719)
Q Consensus 324 as~s~Dg~I~iwd~ 337 (719)
+++|.|..++++.+
T Consensus 492 ~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 492 ASTSMDAILRLYAL 505 (506)
T ss_pred eeccchhheEEeec
Confidence 99999999999865
No 81
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.94 E-value=2.8e-26 Score=221.28 Aligned_cols=291 Identities=18% Similarity=0.266 Sum_probs=230.0
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
++.+.-+.|..|+||| ++|++|+.||-|.+||..+.... .+-.++....+.-+...|.|++|+. |..+|+
T Consensus 210 Fg~KSh~EcA~FSPDg--------qyLvsgSvDGFiEVWny~~GKlr-KDLkYQAqd~fMMmd~aVlci~FSR-DsEMlA 279 (508)
T KOG0275|consen 210 FGQKSHVECARFSPDG--------QYLVSGSVDGFIEVWNYTTGKLR-KDLKYQAQDNFMMMDDAVLCISFSR-DSEMLA 279 (508)
T ss_pred cccccchhheeeCCCC--------ceEeeccccceeeeehhccchhh-hhhhhhhhcceeecccceEEEeecc-cHHHhh
Confidence 4567788999999999 89999999999999998443221 1111122234556889999999999 889999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
+|+.||.|+||.+.++.+++.| ...|...|+|+.|+.++. .+++++.|.+++|.-+++|+++..|. +|.+.|
T Consensus 280 sGsqDGkIKvWri~tG~ClRrF------drAHtkGvt~l~FSrD~S-qiLS~sfD~tvRiHGlKSGK~LKEfr-GHsSyv 351 (508)
T KOG0275|consen 280 SGSQDGKIKVWRIETGQCLRRF------DRAHTKGVTCLSFSRDNS-QILSASFDQTVRIHGLKSGKCLKEFR-GHSSYV 351 (508)
T ss_pred ccCcCCcEEEEEEecchHHHHh------hhhhccCeeEEEEccCcc-hhhcccccceEEEeccccchhHHHhc-Cccccc
Confidence 9999999999999999997765 346888999999999975 78899999999999999999999999 999999
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEee--CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~--~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
+...|.+|| ..+++++.|+ +|++|+.++. +++.++. +....|.++..-|.+...++.|...++|.|.++ .|+
T Consensus 352 n~a~ft~dG-~~iisaSsDg---tvkvW~~Ktt-eC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~-qGQ 425 (508)
T KOG0275|consen 352 NEATFTDDG-HHIISASSDG---TVKVWHGKTT-ECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM-QGQ 425 (508)
T ss_pred cceEEcCCC-CeEEEecCCc---cEEEecCcch-hhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec-cce
Confidence 999999999 5789999998 9999999875 6777765 345578888888877789999999999999998 788
Q ss_pred EEEEecCC---CCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCC--CCCCCCCccCcceecCCCceeeeeCC
Q 046451 299 IVSELPAG---TNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGD--SNFSAAPLRAPKWYKRPAGASFGFGG 373 (719)
Q Consensus 299 ~~~~l~~h---~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~--~~~~~~~~~~p~w~~~~~~~s~s~~G 373 (719)
.+..+... .+...+++.+|.| .++.+.++|+.++.|.+.+|++..... +....+....| -....++++-||
T Consensus 426 vVrsfsSGkREgGdFi~~~lSpkG-ewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHP---HqNllAsYsEDg 501 (508)
T KOG0275|consen 426 VVRSFSSGKREGGDFINAILSPKG-EWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHP---HQNLLASYSEDG 501 (508)
T ss_pred EEeeeccCCccCCceEEEEecCCC-cEEEEEccCcEEEEEEeecCceeeeeecccccccccccCc---ccchhhhhcccc
Confidence 88888643 3346677899999 799999999999999999998765211 11111111212 122345677777
Q ss_pred cEEEEc
Q 046451 374 KLVSFH 379 (719)
Q Consensus 374 klv~~~ 379 (719)
.+..|.
T Consensus 502 llKLWk 507 (508)
T KOG0275|consen 502 LLKLWK 507 (508)
T ss_pred hhhhcC
Confidence 766553
No 82
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=1.2e-25 Score=238.09 Aligned_cols=245 Identities=24% Similarity=0.415 Sum_probs=208.0
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
.+.|+++.|+++|.+||+|..+|.| +|||.........+. ..|...|-+++|+. ..
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v----------~iwD~~~~k~~~~~~----~~h~~rvg~laW~~----------~~ 272 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTV----------QIWDVKEQKKTRTLR----GSHASRVGSLAWNS----------SV 272 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeE----------EEEehhhcccccccc----CCcCceeEEEeccC----------ce
Confidence 4889999999999999999988877 899988665554441 22899999999994 58
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCcc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~ 166 (719)
+.+|+.||.|..+|+.... .....+.+|...|+.++|++ |+++||+|+.|+.+.|||.........
T Consensus 273 lssGsr~~~I~~~dvR~~~--------~~~~~~~~H~qeVCgLkws~-d~~~lASGgnDN~~~Iwd~~~~~p~~~----- 338 (484)
T KOG0305|consen 273 LSSGSRDGKILNHDVRISQ--------HVVSTLQGHRQEVCGLKWSP-DGNQLASGGNDNVVFIWDGLSPEPKFT----- 338 (484)
T ss_pred EEEecCCCcEEEEEEecch--------hhhhhhhcccceeeeeEECC-CCCeeccCCCccceEeccCCCccccEE-----
Confidence 9999999999999995321 22234888999999999999 899999999999999999965554433
Q ss_pred CCCCCCCCCeEEEEecCCCCcEEEEEe--CCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 167 GNGSAAQGEISFVSWNSKVQHILASTS--YNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 167 ~~~~~h~~~I~~l~~sp~g~~~l~s~s--~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
...|...|..++|+|.-..+||+|+ .|++|++||..+++.+..+. ....|.+|.|++..+.++.+.+... ..
T Consensus 339 --~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vd--tgsQVcsL~Wsk~~kEi~sthG~s~--n~ 412 (484)
T KOG0305|consen 339 --FTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVD--TGSQVCSLIWSKKYKELLSTHGYSE--NQ 412 (484)
T ss_pred --EeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccc--cCCceeeEEEcCCCCEEEEecCCCC--Cc
Confidence 2458889999999998878999875 49999999999999999887 7899999999999866666655544 28
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~ 297 (719)
|.||+..+ .+.+..+.+|...|..++++| |+..|++|+.|.++++|++...
T Consensus 413 i~lw~~ps-~~~~~~l~gH~~RVl~la~SP-dg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 413 ITLWKYPS-MKLVAELLGHTSRVLYLALSP-DGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred EEEEeccc-cceeeeecCCcceeEEEEECC-CCCEEEEecccCcEEeccccCC
Confidence 99999977 477889999999999999999 9999999999999999998764
No 83
>PTZ00420 coronin; Provisional
Probab=99.94 E-value=8.7e-25 Score=241.04 Aligned_cols=235 Identities=20% Similarity=0.313 Sum_probs=180.4
Q ss_pred EcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC-CCccCCccCC
Q 046451 90 GLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE-PSHFPPLRGN 168 (719)
Q Consensus 90 gs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~-~~~~~~l~~~ 168 (719)
|+.++.|++|+. ... ..+..+.+|.+.|.+++|+++++++|++|+.||+|+|||+.+... ...+......
T Consensus 50 GG~~gvI~L~~~------~r~---~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~ 120 (568)
T PTZ00420 50 GGLIGAIRLENQ------MRK---PPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCI 120 (568)
T ss_pred CCceeEEEeeec------CCC---ceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEE
Confidence 566889999997 333 567888999999999999996688999999999999999986432 1111001112
Q ss_pred CCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEE
Q 046451 169 GSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLW 248 (719)
Q Consensus 169 ~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lw 248 (719)
..+|...|.+++|+|++..+|++++.|++|+|||+++++.+..+. +...|.+++|+++|. +|++++.|+ .|+||
T Consensus 121 L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~--~~~~V~SlswspdG~-lLat~s~D~---~IrIw 194 (568)
T PTZ00420 121 LKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN--MPKKLSSLKWNIKGN-LLSGTCVGK---HMHII 194 (568)
T ss_pred eecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe--cCCcEEEEEECCCCC-EEEEEecCC---EEEEE
Confidence 346788999999999987677899999999999999998877776 567899999999984 778888787 89999
Q ss_pred ecCCCCCceEEeeCCCCCeeEE-----EeCCCCCCeEEEEeCCC----cEEEEECCC-CeEEEEecC--CCCCeEEeEEc
Q 046451 249 DMRNTMSPVKEFVGHTKGVIAM-----SWCPNDSSYLLTCAKDN----RTICWDTVS-GEIVSELPA--GTNWNFDIHWY 316 (719)
Q Consensus 249 Dl~~~~~~~~~~~~h~~~V~~v-----~~sp~d~~~l~sgs~Dg----~I~iwd~~~-~~~~~~l~~--h~~~v~~l~~s 316 (719)
|+++. ..+.++.+|.+.+... .|++ ++.+|++++.|+ +|+|||+++ ++.+..+.. +...+.. .|.
T Consensus 195 D~Rsg-~~i~tl~gH~g~~~s~~v~~~~fs~-d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p-~~D 271 (568)
T PTZ00420 195 DPRKQ-EIASSFHIHDGGKNTKNIWIDGLGG-DDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIP-HYD 271 (568)
T ss_pred ECCCC-cEEEEEecccCCceeEEEEeeeEcC-CCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEE-eee
Confidence 99985 6678889998765432 3457 778888888774 799999985 555555433 3332223 344
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 317 PKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 317 pdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
++...++++|+.|+.|++|++..+..
T Consensus 272 ~~tg~l~lsGkGD~tIr~~e~~~~~~ 297 (568)
T PTZ00420 272 ESTGLIYLIGKGDGNCRYYQHSLGSI 297 (568)
T ss_pred CCCCCEEEEEECCCeEEEEEccCCcE
Confidence 44338899999999999999987653
No 84
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.94 E-value=3.7e-25 Score=223.75 Aligned_cols=299 Identities=16% Similarity=0.211 Sum_probs=228.9
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCce-E-EEEEeeccCCcccceeecc-cCCCCCceeeeecCCCCCCC
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSAN-L-EIFKLDFQSEDRDLLLVGE-SPSSERFNRLAWGKNGSGSE 80 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~-i-~iwd~~~~~~~~~~~~~~~-~~~~~~V~~l~~sp~g~~~~ 80 (719)
.+|.-.|.||++++|++++.+++.+|.|.=|.-..+. + .+|.-+.--......+... ..|...+.+++.++|+
T Consensus 139 ~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg---- 214 (479)
T KOG0299|consen 139 GKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG---- 214 (479)
T ss_pred ccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC----
Confidence 3566779999999999999999999877433222211 1 2333220000011111112 3788999999999999
Q ss_pred CCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCC
Q 046451 81 DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 81 ~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~ 160 (719)
++|++|+.|..|.||+. .+. +.++.+.+|.+.|.+++|-. +.+.|++++.|+.|++|+++....+.
T Consensus 215 ----kylatgg~d~~v~Iw~~------~t~---ehv~~~~ghr~~V~~L~fr~-gt~~lys~s~Drsvkvw~~~~~s~ve 280 (479)
T KOG0299|consen 215 ----KYLATGGRDRHVQIWDC------DTL---EHVKVFKGHRGAVSSLAFRK-GTSELYSASADRSVKVWSIDQLSYVE 280 (479)
T ss_pred ----cEEEecCCCceEEEecC------ccc---chhhcccccccceeeeeeec-CccceeeeecCCceEEEehhHhHHHH
Confidence 89999999999999999 455 77888999999999999987 78899999999999999998876554
Q ss_pred ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCC
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED 240 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~ 240 (719)
+ ..+|.+.|..|...... +.+.+|+.|+++++|++..... ..+. ++.+.+.|++|-.+. .|++|+++|
T Consensus 281 t-------lyGHqd~v~~IdaL~re-R~vtVGgrDrT~rlwKi~eesq-lifr-g~~~sidcv~~In~~--HfvsGSdnG 348 (479)
T KOG0299|consen 281 T-------LYGHQDGVLGIDALSRE-RCVTVGGRDRTVRLWKIPEESQ-LIFR-GGEGSIDCVAFINDE--HFVSGSDNG 348 (479)
T ss_pred H-------HhCCccceeeechhccc-ceEEeccccceeEEEeccccce-eeee-CCCCCeeeEEEeccc--ceeeccCCc
Confidence 4 24688899999988775 5666777999999999954333 3344 688899999999884 699999998
Q ss_pred CCCcEEEEecCCCCCceEEee-CC-----------CCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC----eEEEEec
Q 046451 241 SSPALRLWDMRNTMSPVKEFV-GH-----------TKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG----EIVSELP 304 (719)
Q Consensus 241 ~~~~I~lwDl~~~~~~~~~~~-~h-----------~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~----~~~~~l~ 304 (719)
.|.||++.+. +++.+.. .| ..+|++++..+ +.+++++|+.+|.|++|.+..+ +++..+.
T Consensus 349 ---~IaLWs~~KK-kplf~~~~AHgv~~~~~~~~~~~Witsla~i~-~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls 423 (479)
T KOG0299|consen 349 ---SIALWSLLKK-KPLFTSRLAHGVIPELDPVNGNFWITSLAVIP-GSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS 423 (479)
T ss_pred ---eEEEeeeccc-CceeEeeccccccCCccccccccceeeeEecc-cCceEEecCCCCceEEEEecCCccccceeeecc
Confidence 9999999764 5554432 22 23899999999 9999999999999999998877 4566665
Q ss_pred CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 305 AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 305 ~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
-.+.|++|+|+.+|..+++..+...++--|-..
T Consensus 424 -~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~~~ 456 (479)
T KOG0299|consen 424 -LVGFVNSLAFSNSGKRIVAGIGKEHRLGRWWCL 456 (479)
T ss_pred -cccEEEEEEEccCCCEEEEecccccccceeeEe
Confidence 567899999999996577777766666666543
No 85
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.94 E-value=7.1e-25 Score=210.75 Aligned_cols=275 Identities=15% Similarity=0.228 Sum_probs=212.9
Q ss_pred cCccceEEEcC-CCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 7 INRSASVAFAP-DAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 7 ~~~V~~vafSp-dg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
.+.|.+++||| ...+|++|+.||+| ++|+++..... .-.....|...|.+++|+.|| .
T Consensus 27 ~DsIS~l~FSP~~~~~~~A~SWD~tV----------R~wevq~~g~~---~~ka~~~~~~PvL~v~Wsddg--------s 85 (347)
T KOG0647|consen 27 EDSISALAFSPQADNLLAAGSWDGTV----------RIWEVQNSGQL---VPKAQQSHDGPVLDVCWSDDG--------S 85 (347)
T ss_pred ccchheeEeccccCceEEecccCCce----------EEEEEecCCcc---cchhhhccCCCeEEEEEccCC--------c
Confidence 47799999999 55677788888877 88999864211 113346789999999999999 6
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCC--EEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN--LLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~--~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
.+++|+.|+.+++||+.+ .....+..|.+.|.++.|-+ ... .|++|+.|.+|++||.+....+..+.
T Consensus 86 kVf~g~~Dk~~k~wDL~S----------~Q~~~v~~Hd~pvkt~~wv~-~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~ 154 (347)
T KOG0647|consen 86 KVFSGGCDKQAKLWDLAS----------GQVSQVAAHDAPVKTCHWVP-GMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ 154 (347)
T ss_pred eEEeeccCCceEEEEccC----------CCeeeeeecccceeEEEEec-CCCcceeEecccccceeecccCCCCeeeeee
Confidence 999999999999999943 35667778999999999987 444 89999999999999999877665532
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCcee-EEecCCCCCceeEEEECCCCCcEEEEEeCCCCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPV-ISFSESIKRRCSVLQWNPDVATQLVVASDEDSS 242 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~-~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~ 242 (719)
..+.+.++..-.. +++++..+..|.+|+++++... ..+....+-.++||++..|.+. ++.|+-+|
T Consensus 155 --------LPeRvYa~Dv~~p---m~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~-~alGsiEG-- 220 (347)
T KOG0647|consen 155 --------LPERVYAADVLYP---MAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDG-FALGSIEG-- 220 (347)
T ss_pred --------ccceeeehhccCc---eeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCc-eEeeeecc--
Confidence 2336777766443 7888899999999999876432 2222245667899999998754 58888887
Q ss_pred CcEEEEecCCCC-CceEEeeCCCC---------CeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEE
Q 046451 243 PALRLWDMRNTM-SPVKEFVGHTK---------GVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFD 312 (719)
Q Consensus 243 ~~I~lwDl~~~~-~~~~~~~~h~~---------~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~ 312 (719)
.+.|..+.... +.-.+|+.|.. .|++|+|+| .-..|+|.|.||++.+||-.....+.+.+.|...|++
T Consensus 221 -rv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP-~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItc 298 (347)
T KOG0647|consen 221 -RVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHP-VHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITC 298 (347)
T ss_pred -eEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeec-ccceEEEecCCceEEEecchhhhhhhccCcCCCccce
Confidence 78888876531 22345666652 477899999 6778999999999999999998899999999999999
Q ss_pred eEEcCCCCCEEEEEeCC
Q 046451 313 IHWYPKIPGVISASSFD 329 (719)
Q Consensus 313 l~~spdg~~~las~s~D 329 (719)
++|+.+|..+..+.+.|
T Consensus 299 c~fn~~G~ifaYA~gYD 315 (347)
T KOG0647|consen 299 CSFNRNGSIFAYALGYD 315 (347)
T ss_pred eEecCCCCEEEEEeecc
Confidence 99999994444444533
No 86
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.94 E-value=1.8e-25 Score=227.05 Aligned_cols=291 Identities=14% Similarity=0.199 Sum_probs=238.4
Q ss_pred ccccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCC
Q 046451 2 ACIKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSED 81 (719)
Q Consensus 2 ~~l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~ 81 (719)
..|.|-.-|.++.+|...+++.||+ .++|+|||+.......-+.-+.......-|.++...+||
T Consensus 414 ~tL~HGEvVcAvtIS~~trhVyTgG-----------kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdg----- 477 (705)
T KOG0639|consen 414 NTLAHGEVVCAVTISNPTRHVYTGG-----------KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDG----- 477 (705)
T ss_pred hhhccCcEEEEEEecCCcceeEecC-----------CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCC-----
Confidence 4566777888999999999999995 456699999865443322223344567788999999999
Q ss_pred CccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCc
Q 046451 82 FSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSH 161 (719)
Q Consensus 82 ~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~ 161 (719)
+.|++|+.-.++.|||+... +. .....+....-....++.++ |.+..+++..||.|.|||+.+...++.
T Consensus 478 ---rtLivGGeastlsiWDLAap----Tp---rikaeltssapaCyALa~sp-DakvcFsccsdGnI~vwDLhnq~~Vrq 546 (705)
T KOG0639|consen 478 ---RTLIVGGEASTLSIWDLAAP----TP---RIKAELTSSAPACYALAISP-DAKVCFSCCSDGNIAVWDLHNQTLVRQ 546 (705)
T ss_pred ---ceEEeccccceeeeeeccCC----Cc---chhhhcCCcchhhhhhhcCC-ccceeeeeccCCcEEEEEcccceeeec
Confidence 78999999999999999531 11 33333444445667889999 889999999999999999999887766
Q ss_pred cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCC
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~ 241 (719)
| .+|.+.+.||.++.+| ..|.+|+-|.+|+.||+++++.+.... ..+.|.++.++|.++ ++++|-.++
T Consensus 547 f-------qGhtDGascIdis~dG-tklWTGGlDntvRcWDlregrqlqqhd--F~SQIfSLg~cP~~d-WlavGMens- 614 (705)
T KOG0639|consen 547 F-------QGHTDGASCIDISKDG-TKLWTGGLDNTVRCWDLREGRQLQQHD--FSSQIFSLGYCPTGD-WLAVGMENS- 614 (705)
T ss_pred c-------cCCCCCceeEEecCCC-ceeecCCCccceeehhhhhhhhhhhhh--hhhhheecccCCCcc-ceeeecccC-
Confidence 3 4688899999999998 689999999999999999999888776 788999999999985 788888877
Q ss_pred CCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCC
Q 046451 242 SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPG 321 (719)
Q Consensus 242 ~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~ 321 (719)
.+.|..... .....+.-|...|.++.|.+ .|+++++.+.|+.+..|.+--|..+...+... .|.++.+|-|+ +
T Consensus 615 --~vevlh~sk--p~kyqlhlheScVLSlKFa~-cGkwfvStGkDnlLnawrtPyGasiFqskE~S-sVlsCDIS~dd-k 687 (705)
T KOG0639|consen 615 --NVEVLHTSK--PEKYQLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQSKESS-SVLSCDISFDD-K 687 (705)
T ss_pred --cEEEEecCC--ccceeecccccEEEEEEecc-cCceeeecCchhhhhhccCccccceeeccccC-cceeeeeccCc-e
Confidence 677777654 33466777999999999999 99999999999999999999999888876654 59999999998 8
Q ss_pred EEEEEeCCCcEEEEeCC
Q 046451 322 VISASSFDGKIGIYNIE 338 (719)
Q Consensus 322 ~las~s~Dg~I~iwd~~ 338 (719)
+|+||+.|++..||.+.
T Consensus 688 yIVTGSGdkkATVYeV~ 704 (705)
T KOG0639|consen 688 YIVTGSGDKKATVYEVI 704 (705)
T ss_pred EEEecCCCcceEEEEEe
Confidence 99999999999999763
No 87
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=1.8e-25 Score=234.11 Aligned_cols=296 Identities=19% Similarity=0.302 Sum_probs=235.6
Q ss_pred eEEEcC-CCCeEEEeeccceeecccCCCceEEEEEeeccCCcccce-eecccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 12 SVAFAP-DAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLL-LVGESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 12 ~vafSp-dg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~-~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
.+..+. .++||.+|++||.| ++|++........-. ......|.+.|+++....++ +.|++
T Consensus 29 ~Lq~da~~~ryLfTgGRDg~i----------~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~--------~tlIS 90 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFTGGRDGII----------RLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNG--------KTLIS 90 (735)
T ss_pred hccccCCCCceEEecCCCceE----------EEeccccccCCcccchhhhhhhhHhHHhhHHhhcCC--------CceEE
Confidence 445554 56789999999877 788887655533222 23345689999999999988 68999
Q ss_pred EcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCC--CCCccCCc--
Q 046451 90 GLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPA--EPSHFPPL-- 165 (719)
Q Consensus 90 gs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~--~~~~~~~l-- 165 (719)
++.|-+|++|+... +. .-++.++..|++.|.||++-..+..++|+|+-|+.|++||++++. .+..+...
T Consensus 91 ~SsDtTVK~W~~~~------~~-~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~ 163 (735)
T KOG0308|consen 91 ASSDTTVKVWNAHK------DN-TFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTV 163 (735)
T ss_pred ecCCceEEEeeccc------Cc-chhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhcccccc
Confidence 99999999999843 21 267788999999999999944478899999999999999999773 22222212
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
.....++...|++++.++.| .+|++|+..+.|++||.++++.+..+. +|...|.++..+.|| +.+++++.|+ +|
T Consensus 164 ~sl~sG~k~siYSLA~N~t~-t~ivsGgtek~lr~wDprt~~kimkLr-GHTdNVr~ll~~dDG-t~~ls~sSDg---tI 237 (735)
T KOG0308|consen 164 NSLGSGPKDSIYSLAMNQTG-TIIVSGGTEKDLRLWDPRTCKKIMKLR-GHTDNVRVLLVNDDG-TRLLSASSDG---TI 237 (735)
T ss_pred ccCCCCCccceeeeecCCcc-eEEEecCcccceEEeccccccceeeee-ccccceEEEEEcCCC-CeEeecCCCc---eE
Confidence 12223678899999999997 699999999999999999999999999 999999999999999 5799999998 99
Q ss_pred EEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe-EEEEecCCCCCeEEeEEcCCCCCEEE
Q 046451 246 RLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE-IVSELPAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~-~~~~l~~h~~~v~~l~~spdg~~~la 324 (719)
++||+... .++.++..|...|+++..++ +-.++++|+.||.|..=|+++.. ....+ .....|..+..+.+.. -+-
T Consensus 238 rlWdLgqQ-rCl~T~~vH~e~VWaL~~~~-sf~~vYsG~rd~~i~~Tdl~n~~~~tlic-k~daPv~~l~~~~~~~-~~W 313 (735)
T KOG0308|consen 238 RLWDLGQQ-RCLATYIVHKEGVWALQSSP-SFTHVYSGGRDGNIYRTDLRNPAKSTLIC-KEDAPVLKLHLHEHDN-SVW 313 (735)
T ss_pred Eeeecccc-ceeeeEEeccCceEEEeeCC-CcceEEecCCCCcEEecccCCchhheEee-cCCCchhhhhhccccC-Cce
Confidence 99999764 78999999999999999998 88999999999999999998843 33333 2334466777775542 336
Q ss_pred EEeCCCcEEEEeCCCCcc
Q 046451 325 ASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 325 s~s~Dg~I~iwd~~~~~~ 342 (719)
+++.|+.|+-|..+-...
T Consensus 314 vtTtds~I~rW~~~~~~~ 331 (735)
T KOG0308|consen 314 VTTTDSSIKRWKLEPDIA 331 (735)
T ss_pred eeeccccceecCCccccc
Confidence 667799999998876543
No 88
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=5.5e-25 Score=224.21 Aligned_cols=275 Identities=16% Similarity=0.244 Sum_probs=222.8
Q ss_pred CCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEE
Q 046451 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLAS 141 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~las 141 (719)
...+.|.+|+|+|..+ +++.++++ -.+.||+. .+. ...+++......|++++|.. ||++|++
T Consensus 24 ke~~~vssl~fsp~~P------~d~aVt~S--~rvqly~~------~~~---~~~k~~srFk~~v~s~~fR~-DG~Llaa 85 (487)
T KOG0310|consen 24 KEHNSVSSLCFSPKHP------YDFAVTSS--VRVQLYSS------VTR---SVRKTFSRFKDVVYSVDFRS-DGRLLAA 85 (487)
T ss_pred cccCcceeEecCCCCC------CceEEecc--cEEEEEec------chh---hhhhhHHhhccceeEEEeec-CCeEEEc
Confidence 3467899999999763 34555554 46899987 333 55566677788999999998 8999999
Q ss_pred EeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCcee
Q 046451 142 GADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCS 221 (719)
Q Consensus 142 gs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~ 221 (719)
|+..|.|+|||+.+...++. ..+|...|..+.|++.+...|++|++|+.+++||+.+......+. +|+..|.
T Consensus 86 GD~sG~V~vfD~k~r~iLR~-------~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~-~htDYVR 157 (487)
T KOG0310|consen 86 GDESGHVKVFDMKSRVILRQ-------LYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELS-GHTDYVR 157 (487)
T ss_pred cCCcCcEEEeccccHHHHHH-------HhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEec-CCcceeE
Confidence 99999999999665333222 245888999999999998899999999999999999988766777 8999999
Q ss_pred EEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC-eEE
Q 046451 222 VLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG-EIV 300 (719)
Q Consensus 222 ~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~-~~~ 300 (719)
|.+|++-...++++|+.|+ .|++||+|.....+.++. |..+|.++.|-| .|..|++++. +.|+|||+.+| +.+
T Consensus 158 ~g~~~~~~~hivvtGsYDg---~vrl~DtR~~~~~v~eln-hg~pVe~vl~lp-sgs~iasAgG-n~vkVWDl~~G~qll 231 (487)
T KOG0310|consen 158 CGDISPANDHIVVTGSYDG---KVRLWDTRSLTSRVVELN-HGCPVESVLALP-SGSLIASAGG-NSVKVWDLTTGGQLL 231 (487)
T ss_pred eeccccCCCeEEEecCCCc---eEEEEEeccCCceeEEec-CCCceeeEEEcC-CCCEEEEcCC-CeEEEEEecCCceeh
Confidence 9999999889999999999 999999998765566664 889999999999 8888888874 67999999854 556
Q ss_pred EEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecC--CCceeeeeCCcEEEE
Q 046451 301 SELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKR--PAGASFGFGGKLVSF 378 (719)
Q Consensus 301 ~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~--~~~~s~s~~Gklv~~ 378 (719)
..+..|...|+|+++..++ ..|++++-|+.++|||+.+-+.+.. |... ...++.+.|+..+++
T Consensus 232 ~~~~~H~KtVTcL~l~s~~-~rLlS~sLD~~VKVfd~t~~Kvv~s--------------~~~~~pvLsiavs~dd~t~vi 296 (487)
T KOG0310|consen 232 TSMFNHNKTVTCLRLASDS-TRLLSGSLDRHVKVFDTTNYKVVHS--------------WKYPGPVLSIAVSPDDQTVVI 296 (487)
T ss_pred hhhhcccceEEEEEeecCC-ceEeecccccceEEEEccceEEEEe--------------eecccceeeEEecCCCceEEE
Confidence 6666699999999999998 8999999999999999888777541 3222 244666777777776
Q ss_pred ccCCC
Q 046451 379 HPKSS 383 (719)
Q Consensus 379 ~~~~~ 383 (719)
+-.++
T Consensus 297 GmsnG 301 (487)
T KOG0310|consen 297 GMSNG 301 (487)
T ss_pred ecccc
Confidence 65544
No 89
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.94 E-value=7.8e-26 Score=225.50 Aligned_cols=267 Identities=18% Similarity=0.280 Sum_probs=222.4
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
..|.+.+..+.|-++. ..|++|+.|..|++|++.. .....+.++.+..+.|+.+.|.. ++.+++
T Consensus 172 d~h~gev~~v~~l~~s--------dtlatgg~Dr~Ik~W~v~~-------~k~~~~~tLaGs~g~it~~d~d~-~~~~~i 235 (459)
T KOG0288|consen 172 DAHEGEVHDVEFLRNS--------DTLATGGSDRIIKLWNVLG-------EKSELISTLAGSLGNITSIDFDS-DNKHVI 235 (459)
T ss_pred hccccccceeEEccCc--------chhhhcchhhhhhhhhccc-------chhhhhhhhhccCCCcceeeecC-CCceEE
Confidence 3588999999999986 6999999999999999842 12367888999999999999999 788999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
+++.|+.+++|++.......+ ..+|.+.|+++.|.... ..+++|+.|.+|++||+.+..+..++. ..+.+
T Consensus 236 Aas~d~~~r~Wnvd~~r~~~T-------LsGHtdkVt~ak~~~~~-~~vVsgs~DRtiK~WDl~k~~C~kt~l--~~S~c 305 (459)
T KOG0288|consen 236 AASNDKNLRLWNVDSLRLRHT-------LSGHTDKVTAAKFKLSH-SRVVSGSADRTIKLWDLQKAYCSKTVL--PGSQC 305 (459)
T ss_pred eecCCCceeeeeccchhhhhh-------hcccccceeeehhhccc-cceeeccccchhhhhhhhhhheecccc--ccccc
Confidence 999999999999998875544 35699999999998774 359999999999999999999988877 67778
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEE
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV 300 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~ 300 (719)
..|+.+. ..++++..|+ .|++||.+.. .+..+...+. .|+++..+. ++..|++++.|.++.++|+++.+..
T Consensus 306 nDI~~~~---~~~~SgH~Dk---kvRfwD~Rs~-~~~~sv~~gg-~vtSl~ls~-~g~~lLsssRDdtl~viDlRt~eI~ 376 (459)
T KOG0288|consen 306 NDIVCSI---SDVISGHFDK---KVRFWDIRSA-DKTRSVPLGG-RVTSLDLSM-DGLELLSSSRDDTLKVIDLRTKEIR 376 (459)
T ss_pred cceEecc---eeeeeccccc---ceEEEeccCC-ceeeEeecCc-ceeeEeecc-CCeEEeeecCCCceeeeecccccEE
Confidence 8888872 4688888898 8999999875 5666776664 999999999 8999999999999999999999988
Q ss_pred EEecCC----CCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecC
Q 046451 301 SELPAG----TNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKR 363 (719)
Q Consensus 301 ~~l~~h----~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~ 363 (719)
..+... ....+.+.|||++ .++++||.||.|+||++.++++.......-....+.+..|.+.
T Consensus 377 ~~~sA~g~k~asDwtrvvfSpd~-~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~s 442 (459)
T KOG0288|consen 377 QTFSAEGFKCASDWTRVVFSPDG-SYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPS 442 (459)
T ss_pred EEeeccccccccccceeEECCCC-ceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCC
Confidence 887642 1237889999999 7999999999999999999999876555444333444445443
No 90
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.94 E-value=6e-25 Score=241.55 Aligned_cols=282 Identities=20% Similarity=0.269 Sum_probs=235.8
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceee-eccccCCEEEEEEeCCCCCEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH-LSRHKGPVRGLEFNSFTPNLLAS 141 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~-l~~h~~~V~~l~fsp~~~~~las 141 (719)
+...+.+..|. + +++++++.|+.|++||. .++ ..+.. +.+|.+.|.+++|.. .+++|++
T Consensus 207 ~~~~~~~~q~~-~---------~~~~~~s~~~tl~~~~~------~~~---~~i~~~l~GH~g~V~~l~~~~-~~~~lvs 266 (537)
T KOG0274|consen 207 DDHVVLCLQLH-D---------GFFKSGSDDSTLHLWDL------NNG---YLILTRLVGHFGGVWGLAFPS-GGDKLVS 266 (537)
T ss_pred Ccchhhhheee-c---------CeEEecCCCceeEEeec------ccc---eEEEeeccCCCCCceeEEEec-CCCEEEE
Confidence 56778888888 3 58999999999999998 455 66666 999999999999987 7899999
Q ss_pred EeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCcee
Q 046451 142 GADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCS 221 (719)
Q Consensus 142 gs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~ 221 (719)
|+.|.+++|||+.++.+...+ .+|.+.|.++...+. ++++|+.|.+|++|++.++..+..+. +|...|.
T Consensus 267 gS~D~t~rvWd~~sg~C~~~l-------~gh~stv~~~~~~~~---~~~sgs~D~tVkVW~v~n~~~l~l~~-~h~~~V~ 335 (537)
T KOG0274|consen 267 GSTDKTERVWDCSTGECTHSL-------QGHTSSVRCLTIDPF---LLVSGSRDNTVKVWDVTNGACLNLLR-GHTGPVN 335 (537)
T ss_pred EecCCcEEeEecCCCcEEEEe-------cCCCceEEEEEccCc---eEeeccCCceEEEEeccCcceEEEec-cccccEE
Confidence 999999999999999987763 357889999987654 78889999999999999999999998 6999999
Q ss_pred EEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC-eEE
Q 046451 222 VLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG-EIV 300 (719)
Q Consensus 222 ~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~-~~~ 300 (719)
++.++ + .++++|+.|+ +|++||.++ .++++++.+|...|.++.+.. . .++++|+.|+.|++||+++. +++
T Consensus 336 ~v~~~--~-~~lvsgs~d~---~v~VW~~~~-~~cl~sl~gH~~~V~sl~~~~-~-~~~~Sgs~D~~IkvWdl~~~~~c~ 406 (537)
T KOG0274|consen 336 CVQLD--E-PLLVSGSYDG---TVKVWDPRT-GKCLKSLSGHTGRVYSLIVDS-E-NRLLSGSLDTTIKVWDLRTKRKCI 406 (537)
T ss_pred EEEec--C-CEEEEEecCc---eEEEEEhhh-ceeeeeecCCcceEEEEEecC-c-ceEEeeeeccceEeecCCchhhhh
Confidence 99999 2 4899999998 999999986 489999999999999998865 3 89999999999999999999 999
Q ss_pred EEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEcc
Q 046451 301 SELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHP 380 (719)
Q Consensus 301 ~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~ 380 (719)
.++.+|..-+.++.+.. ++|++++.|++|++||.+++++....+.. ....+.+..+. ....++.+-+|.+..|+.
T Consensus 407 ~tl~~h~~~v~~l~~~~---~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~-~~~~v~~l~~~-~~~il~s~~~~~~~l~dl 481 (537)
T KOG0274|consen 407 HTLQGHTSLVSSLLLRD---NFLVSSSADGTIKLWDAEEGECLRTLEGR-HVGGVSALALG-KEEILCSSDDGSVKLWDL 481 (537)
T ss_pred hhhcCCccccccccccc---ceeEeccccccEEEeecccCceeeeeccC-CcccEEEeecC-cceEEEEecCCeeEEEec
Confidence 99999999887666652 68999999999999999999987755543 11112222222 346677888888888877
Q ss_pred CCCCCcccc
Q 046451 381 KSSAGHTSE 389 (719)
Q Consensus 381 ~~~~~~~~~ 389 (719)
......+.+
T Consensus 482 ~~~~~~~~l 490 (537)
T KOG0274|consen 482 RSGTLIRTL 490 (537)
T ss_pred ccCchhhhh
Confidence 777666544
No 91
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=1.7e-24 Score=209.35 Aligned_cols=245 Identities=23% Similarity=0.364 Sum_probs=200.0
Q ss_pred ecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCC-
Q 046451 58 VGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTP- 136 (719)
Q Consensus 58 ~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~- 136 (719)
.....|...|++++.+. .++|+|+.|-+|+|||+. .. ..+..+-.|.+.|+++.|.+ ..
T Consensus 37 F~~~aH~~sitavAVs~----------~~~aSGssDetI~IYDm~------k~---~qlg~ll~HagsitaL~F~~-~~S 96 (362)
T KOG0294|consen 37 FAFSAHAGSITALAVSG----------PYVASGSSDETIHIYDMR------KR---KQLGILLSHAGSITALKFYP-PLS 96 (362)
T ss_pred ccccccccceeEEEecc----------eeEeccCCCCcEEEEecc------ch---hhhcceeccccceEEEEecC-Ccc
Confidence 44557999999999875 699999999999999994 33 66777888999999999987 33
Q ss_pred -CEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCC
Q 046451 137 -NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSES 215 (719)
Q Consensus 137 -~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~ 215 (719)
+.|++|+.||.|.+|+...-..... ...|.+.|+.++.+|.+ ++.++.+.|+.+++||+-+++.-..+.
T Consensus 97 ~shLlS~sdDG~i~iw~~~~W~~~~s-------lK~H~~~Vt~lsiHPS~-KLALsVg~D~~lr~WNLV~Gr~a~v~~-- 166 (362)
T KOG0294|consen 97 KSHLLSGSDDGHIIIWRVGSWELLKS-------LKAHKGQVTDLSIHPSG-KLALSVGGDQVLRTWNLVRGRVAFVLN-- 166 (362)
T ss_pred hhheeeecCCCcEEEEEcCCeEEeee-------ecccccccceeEecCCC-ceEEEEcCCceeeeehhhcCccceeec--
Confidence 3899999999999999987765444 34578889999999997 688899999999999999998766665
Q ss_pred CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 216 IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 216 ~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
....-+.+.|++.|+ .|++...++ |-+|.+.+. ....++. ....+.++.|- ++..|++|++|+.|++||..
T Consensus 167 L~~~at~v~w~~~Gd-~F~v~~~~~----i~i~q~d~A-~v~~~i~-~~~r~l~~~~l--~~~~L~vG~d~~~i~~~D~d 237 (362)
T KOG0294|consen 167 LKNKATLVSWSPQGD-HFVVSGRNK----IDIYQLDNA-SVFREIE-NPKRILCATFL--DGSELLVGGDNEWISLKDTD 237 (362)
T ss_pred cCCcceeeEEcCCCC-EEEEEeccE----EEEEecccH-hHhhhhh-ccccceeeeec--CCceEEEecCCceEEEeccC
Confidence 344445599999996 566666664 999998764 3333333 23567788876 68899999999999999999
Q ss_pred CCeEEEEecCCCCCeEEeEEc--CCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 296 SGEIVSELPAGTNWNFDIHWY--PKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 296 ~~~~~~~l~~h~~~v~~l~~s--pdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
+..++..+.+|.+.|-++.+. +++ .+|+|+|.||.|+|||++....
T Consensus 238 s~~~~~~~~AH~~RVK~i~~~~~~~~-~~lvTaSSDG~I~vWd~~~~~k 285 (362)
T KOG0294|consen 238 SDTPLTEFLAHENRVKDIASYTNPEH-EYLVTASSDGFIKVWDIDMETK 285 (362)
T ss_pred CCccceeeecchhheeeeEEEecCCc-eEEEEeccCceEEEEEcccccc
Confidence 999999999999999999843 344 7999999999999999987633
No 92
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=2.7e-25 Score=237.02 Aligned_cols=318 Identities=21% Similarity=0.319 Sum_probs=241.1
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceee--cccCCCCCceeeeecCCCCCCCCCccce
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLV--GESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~--~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
...+|+.++|-.-|++++ ...++||.++.......+.+. ........+.++.|+...+ ++
T Consensus 41 ~~nAIs~nr~~~qiv~AG-----------rs~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~-------Nl 102 (839)
T KOG0269|consen 41 KANAISVNRDINQIVVAG-----------RSLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYS-------NL 102 (839)
T ss_pred ccceEeecCCcceeEEec-----------ccceeeEeeCcccCCcceeeecccccceeeehhhcccccchh-------hh
Confidence 445666677766666663 345577777654433332221 1122334567889985433 89
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCcc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~ 166 (719)
||+++..|.|.+||+... ...+.+..|..|+..+.+++|+....++|++|+.||.|++||++..+...++ .
T Consensus 103 IAT~s~nG~i~vWdlnk~------~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~---~ 173 (839)
T KOG0269|consen 103 IATCSTNGVISVWDLNKS------IRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTF---R 173 (839)
T ss_pred heeecCCCcEEEEecCcc------ccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccc---c
Confidence 999999999999999432 2236777899999999999999989999999999999999999998877664 2
Q ss_pred CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC-ceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ-KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 167 ~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
+ ..+.|+++.|++...+.|+++.++|.+.+||+|.. ++...+. .|.+.|.|+.|+|++ .+|++|+.|+ .|
T Consensus 174 ~----nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~-AH~GpV~c~nwhPnr-~~lATGGRDK---~v 244 (839)
T KOG0269|consen 174 S----NSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLT-AHNGPVLCLNWHPNR-EWLATGGRDK---MV 244 (839)
T ss_pred c----cchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhh-cccCceEEEeecCCC-ceeeecCCCc---cE
Confidence 2 45589999999988899999999999999999975 4555565 899999999999976 6899999998 99
Q ss_pred EEEecCCCCC-ceEEeeCCCCCeeEEEeCCCCCCeEEEEe--CCCcEEEEECCCC-eEEEEecCCCCCeEEeEEcCCCCC
Q 046451 246 RLWDMRNTMS-PVKEFVGHTKGVIAMSWCPNDSSYLLTCA--KDNRTICWDTVSG-EIVSELPAGTNWNFDIHWYPKIPG 321 (719)
Q Consensus 246 ~lwDl~~~~~-~~~~~~~h~~~V~~v~~sp~d~~~l~sgs--~Dg~I~iwd~~~~-~~~~~l~~h~~~v~~l~~spdg~~ 321 (719)
+|||+.+... .+.++. ....|.+|+|-|.....|++|+ .|-.|+|||++.- -...++..|.+.++.++|......
T Consensus 245 kiWd~t~~~~~~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~ 323 (839)
T KOG0269|consen 245 KIWDMTDSRAKPKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRI 323 (839)
T ss_pred EEEeccCCCccceeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCce
Confidence 9999975432 233332 3468999999996677888886 5789999999754 456778899999999999886557
Q ss_pred EEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEE
Q 046451 322 VISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSF 378 (719)
Q Consensus 322 ~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~ 378 (719)
.|.+++.||+|....+++...-. -+....+++++..|.+...
T Consensus 324 ~l~s~sKD~tv~qh~~knat~pi---------------d~a~~~~~s~g~~g~l~fa 365 (839)
T KOG0269|consen 324 NLWSCSKDGTVLQHLFKNATTPI---------------DLANNGGLSVGQFGDLYFA 365 (839)
T ss_pred eeEeecCccHHHHhhhhcccChh---------------hhcCcccccccccCceeEE
Confidence 89999999998877776654322 1223456777777776543
No 93
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.93 E-value=1e-24 Score=209.73 Aligned_cols=298 Identities=17% Similarity=0.282 Sum_probs=228.3
Q ss_pred ecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccC---------CCCCCCCceeeeccccCCEEE
Q 046451 58 VGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISS---------GETGGNPLIAHLSRHKGPVRG 128 (719)
Q Consensus 58 ~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~---------~~~~~~~~~~~l~~h~~~V~~ 128 (719)
.....|+..+.+-+|++|| .++++|+.|-+|+|+|++.+... .+......++++..|.+.|++
T Consensus 106 ~ylt~HK~~cR~aafs~DG--------~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~ 177 (430)
T KOG0640|consen 106 KYLTSHKSPCRAAAFSPDG--------SLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVND 177 (430)
T ss_pred EEEeecccceeeeeeCCCC--------cEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccc
Confidence 3345689999999999999 79999999999999999744321 222233578899999999999
Q ss_pred EEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce
Q 046451 129 LEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP 208 (719)
Q Consensus 129 l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~ 208 (719)
+.|+| ...+|++|+.|++|++||+......+.+..+.. ...|.+|.|+|.|+ +|++|...-++++||+++.++
T Consensus 178 l~FHP-re~ILiS~srD~tvKlFDfsK~saKrA~K~~qd-----~~~vrsiSfHPsGe-fllvgTdHp~~rlYdv~T~Qc 250 (430)
T KOG0640|consen 178 LDFHP-RETILISGSRDNTVKLFDFSKTSAKRAFKVFQD-----TEPVRSISFHPSGE-FLLVGTDHPTLRLYDVNTYQC 250 (430)
T ss_pred eeecc-hhheEEeccCCCeEEEEecccHHHHHHHHHhhc-----cceeeeEeecCCCc-eEEEecCCCceeEEeccceeE
Confidence 99999 789999999999999999987655444332332 34799999999985 889999999999999999887
Q ss_pred eEEec--CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEee-CCC-CCeeEEEeCCCCCCeEEEEe
Q 046451 209 VISFS--ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFV-GHT-KGVIAMSWCPNDSSYLLTCA 284 (719)
Q Consensus 209 ~~~~~--~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~-~h~-~~V~~v~~sp~d~~~l~sgs 284 (719)
...-. ..|.+.|+++.+++.+ .++++++.|| .|+|||--.. +++.++. .|. ..|.+..|.. ++++|++.+
T Consensus 251 fvsanPd~qht~ai~~V~Ys~t~-~lYvTaSkDG---~IklwDGVS~-rCv~t~~~AH~gsevcSa~Ftk-n~kyiLsSG 324 (430)
T KOG0640|consen 251 FVSANPDDQHTGAITQVRYSSTG-SLYVTASKDG---AIKLWDGVSN-RCVRTIGNAHGGSEVCSAVFTK-NGKYILSSG 324 (430)
T ss_pred eeecCcccccccceeEEEecCCc-cEEEEeccCC---cEEeeccccH-HHHHHHHhhcCCceeeeEEEcc-CCeEEeecC
Confidence 65433 2688999999999998 5899999998 9999997654 5666663 565 4788899999 999999999
Q ss_pred CCCcEEEEECCCCeEEEEecCC-----CCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcc
Q 046451 285 KDNRTICWDTVSGEIVSELPAG-----TNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPK 359 (719)
Q Consensus 285 ~Dg~I~iwd~~~~~~~~~l~~h-----~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~ 359 (719)
.|..+++|++.+++.+.++.+- ...-+...|+....++|.---..+.+.-||.++........ .++-.++.
T Consensus 325 ~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~s----lgHn~a~R 400 (430)
T KOG0640|consen 325 KDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLS----LGHNGAVR 400 (430)
T ss_pred CcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcc----cCCCCCce
Confidence 9999999999999999998753 12234456777664444444446789999999887655221 12224566
Q ss_pred eecC----CCceeeeeCCcEEEEcc
Q 046451 360 WYKR----PAGASFGFGGKLVSFHP 380 (719)
Q Consensus 360 w~~~----~~~~s~s~~Gklv~~~~ 380 (719)
|+.. +..+++|-|-+...|..
T Consensus 401 ~i~HSP~~p~FmTcsdD~raRFWyr 425 (430)
T KOG0640|consen 401 WIVHSPVEPAFMTCSDDFRARFWYR 425 (430)
T ss_pred EEEeCCCCCceeeecccceeeeeee
Confidence 7653 34566666666655543
No 94
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.93 E-value=2.9e-24 Score=206.60 Aligned_cols=274 Identities=17% Similarity=0.288 Sum_probs=210.6
Q ss_pred CCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEE
Q 046451 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLAS 141 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~las 141 (719)
.-++.|.+|+|||... .+|+.|+.||+||+|+++. ++ ...-+....|.++|.+++|+. ++..+++
T Consensus 25 pP~DsIS~l~FSP~~~-------~~~~A~SWD~tVR~wevq~-----~g--~~~~ka~~~~~~PvL~v~Wsd-dgskVf~ 89 (347)
T KOG0647|consen 25 PPEDSISALAFSPQAD-------NLLAAGSWDGTVRIWEVQN-----SG--QLVPKAQQSHDGPVLDVCWSD-DGSKVFS 89 (347)
T ss_pred CcccchheeEeccccC-------ceEEecccCCceEEEEEec-----CC--cccchhhhccCCCeEEEEEcc-CCceEEe
Confidence 3567899999999432 6888999999999999953 12 122255667999999999998 8899999
Q ss_pred EeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCC-cEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 142 GADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQ-HILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 142 gs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~-~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
|+.|+.+++|||.+++.... ..|.+.|.++.|-+... ..|++|+.|.+|+.||+|...++.++. ..+++
T Consensus 90 g~~Dk~~k~wDL~S~Q~~~v--------~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~--LPeRv 159 (347)
T KOG0647|consen 90 GGCDKQAKLWDLASGQVSQV--------AAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ--LPERV 159 (347)
T ss_pred eccCCceEEEEccCCCeeee--------eecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee--cccee
Confidence 99999999999999854322 35888999999976532 378999999999999999999999988 77888
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC-CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC--
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG-HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG-- 297 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~-h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~-- 297 (719)
++++.-.. +++++..+. .|.+|+|++.....+.... -.-.+.||+... |.+..+.|+-+|++.|..+..+
T Consensus 160 Ya~Dv~~p---m~vVata~r---~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~-d~~~~alGsiEGrv~iq~id~~~~ 232 (347)
T KOG0647|consen 160 YAADVLYP---MAVVATAER---HIAVYNLENPPTEFKRIESPLKWQTRCVACFQ-DKDGFALGSIEGRVAIQYIDDPNP 232 (347)
T ss_pred eehhccCc---eeEEEecCC---cEEEEEcCCCcchhhhhcCcccceeeEEEEEe-cCCceEeeeecceEEEEecCCCCc
Confidence 88776644 566666666 7999999876433333221 233578888888 7777899999999999998876
Q ss_pred eEEEEecCCCC---------CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCcee
Q 046451 298 EIVSELPAGTN---------WNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGAS 368 (719)
Q Consensus 298 ~~~~~l~~h~~---------~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s 368 (719)
+.-..|+.|.. .|.+|+|+|.- ..|+|.+.||++.+||-+....+...+.. -......+
T Consensus 233 ~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~h-gtlvTaGsDGtf~FWDkdar~kLk~s~~~-----------~qpItcc~ 300 (347)
T KOG0647|consen 233 KDNFTFKCHRSTNSVNDDVYAVNSIAFHPVH-GTLVTAGSDGTFSFWDKDARTKLKTSETH-----------PQPITCCS 300 (347)
T ss_pred cCceeEEEeccCCCCCCceEEecceEeeccc-ceEEEecCCceEEEecchhhhhhhccCcC-----------CCccceeE
Confidence 44455666542 47789999987 79999999999999998877665422211 01124578
Q ss_pred eeeCCcEEEEc
Q 046451 369 FGFGGKLVSFH 379 (719)
Q Consensus 369 ~s~~Gklv~~~ 379 (719)
|..+|.+.++.
T Consensus 301 fn~~G~ifaYA 311 (347)
T KOG0647|consen 301 FNRNGSIFAYA 311 (347)
T ss_pred ecCCCCEEEEE
Confidence 99999998765
No 95
>PTZ00420 coronin; Provisional
Probab=99.93 E-value=1.3e-23 Score=231.84 Aligned_cols=256 Identities=16% Similarity=0.192 Sum_probs=182.2
Q ss_pred CceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCcee
Q 046451 38 SANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIA 117 (719)
Q Consensus 38 ~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~ 117 (719)
.+.+++|+..... .+....+|...|.+++|+++.. .+|++|+.||.|+|||+...... .......+.
T Consensus 53 ~gvI~L~~~~r~~-----~v~~L~gH~~~V~~lafsP~~~-------~lLASgS~DgtIrIWDi~t~~~~-~~~i~~p~~ 119 (568)
T PTZ00420 53 IGAIRLENQMRKP-----PVIKLKGHTSSILDLQFNPCFS-------EILASGSEDLTIRVWEIPHNDES-VKEIKDPQC 119 (568)
T ss_pred eeEEEeeecCCCc-----eEEEEcCCCCCEEEEEEcCCCC-------CEEEEEeCCCeEEEEECCCCCcc-ccccccceE
Confidence 3456888765322 1233457999999999999732 79999999999999998531100 000012345
Q ss_pred eeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCc
Q 046451 118 HLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGT 197 (719)
Q Consensus 118 ~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~ 197 (719)
.+.+|...|.+++|+|.+..+|++++.|++|+|||+.++.....+ .+...|.+++|+++| .+|++++.|+.
T Consensus 120 ~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i--------~~~~~V~SlswspdG-~lLat~s~D~~ 190 (568)
T PTZ00420 120 ILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQI--------NMPKKLSSLKWNIKG-NLLSGTCVGKH 190 (568)
T ss_pred EeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEE--------ecCCcEEEEEECCCC-CEEEEEecCCE
Confidence 678899999999999954456789999999999999987654332 134579999999997 58899999999
Q ss_pred EEEEECCCCceeEEecCCCCCceeE-----EEECCCCCcEEEEEeCCC-CCCcEEEEecCCCCCceEEeeCCC--CCeeE
Q 046451 198 TVVWDLKKQKPVISFSESIKRRCSV-----LQWNPDVATQLVVASDED-SSPALRLWDMRNTMSPVKEFVGHT--KGVIA 269 (719)
Q Consensus 198 I~iwd~~~~~~~~~~~~~~~~~i~~-----l~~sp~g~~~l~~~s~d~-~~~~I~lwDl~~~~~~~~~~~~h~--~~V~~ 269 (719)
|+|||+++++.+.++. .|.+.+.+ ..|++++. +|++++.++ ....|+|||+++...++..+..+. +.+..
T Consensus 191 IrIwD~Rsg~~i~tl~-gH~g~~~s~~v~~~~fs~d~~-~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p 268 (568)
T PTZ00420 191 MHIIDPRKQEIASSFH-IHDGGKNTKNIWIDGLGGDDN-YILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIP 268 (568)
T ss_pred EEEEECCCCcEEEEEe-cccCCceeEEEEeeeEcCCCC-EEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEE
Confidence 9999999999988887 66655433 23457775 555555443 334799999997666676554332 22223
Q ss_pred EEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC--CCCCeEEeEEcCCC
Q 046451 270 MSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA--GTNWNFDIHWYPKI 319 (719)
Q Consensus 270 v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~--h~~~v~~l~~spdg 319 (719)
.|.++++.++++|+.|+.|++|++..+.. ..+.. +...+.+++|.|+.
T Consensus 269 -~~D~~tg~l~lsGkGD~tIr~~e~~~~~~-~~l~~~~s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 269 -HYDESTGLIYLIGKGDGNCRYYQHSLGSI-RKVNEYKSCSPFRSFGFLPKQ 318 (568)
T ss_pred -eeeCCCCCEEEEEECCCeEEEEEccCCcE-EeecccccCCCccceEEcccc
Confidence 34443788999999999999999987642 33322 44567788898875
No 96
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=4.3e-25 Score=231.26 Aligned_cols=238 Identities=20% Similarity=0.307 Sum_probs=202.9
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
++|++|++||.|++|++.......+. ..+..+..|.+.|+++.... +++.|++++.|-+|++|+.......
T Consensus 38 ryLfTgGRDg~i~~W~~~~d~~~~s~---~~~asme~HsDWVNDiiL~~-~~~tlIS~SsDtTVK~W~~~~~~~~----- 108 (735)
T KOG0308|consen 38 RYLFTGGRDGIIRLWSVTQDSNEPST---PYIASMEHHSDWVNDIILCG-NGKTLISASSDTTVKVWNAHKDNTF----- 108 (735)
T ss_pred ceEEecCCCceEEEeccccccCCccc---chhhhhhhhHhHHhhHHhhc-CCCceEEecCCceEEEeecccCcch-----
Confidence 68999999999999998643321122 46788899999999999988 7889999999999999999877511
Q ss_pred ccCCCCCCCCCeEEEEe-cCCCCcEEEEEeCCCcEEEEECCCCc--eeEEecC--------CCCCceeEEEECCCCCcEE
Q 046451 165 LRGNGSAAQGEISFVSW-NSKVQHILASTSYNGTTVVWDLKKQK--PVISFSE--------SIKRRCSVLQWNPDVATQL 233 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~-sp~g~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~--------~~~~~i~~l~~sp~g~~~l 233 (719)
.......|.+.|.|+++ ..+ ..++++|+-|+.|.+||++++. .+.++.. ++...|++++.++.| .+|
T Consensus 109 c~stir~H~DYVkcla~~ak~-~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~-t~i 186 (735)
T KOG0308|consen 109 CMSTIRTHKDYVKCLAYIAKN-NELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTG-TII 186 (735)
T ss_pred hHhhhhcccchheeeeecccC-ceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcc-eEE
Confidence 22233458999999999 555 4699999999999999999872 2322221 577889999999998 788
Q ss_pred EEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEe
Q 046451 234 VVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDI 313 (719)
Q Consensus 234 ~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l 313 (719)
+.|+.++ .|++||.++. +.+..+.||...|..+..+. ||..+++++.||+|++||+...+++.++..|...|+++
T Consensus 187 vsGgtek---~lr~wDprt~-~kimkLrGHTdNVr~ll~~d-DGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL 261 (735)
T KOG0308|consen 187 VSGGTEK---DLRLWDPRTC-KKIMKLRGHTDNVRVLLVND-DGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWAL 261 (735)
T ss_pred EecCccc---ceEEeccccc-cceeeeeccccceEEEEEcC-CCCeEeecCCCceEEeeeccccceeeeEEeccCceEEE
Confidence 8888888 8999999986 55677889999999999998 99999999999999999999999999999999999999
Q ss_pred EEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 314 HWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 314 ~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
..+++- ..+.+|+.||.|..=|+.+
T Consensus 262 ~~~~sf-~~vYsG~rd~~i~~Tdl~n 286 (735)
T KOG0308|consen 262 QSSPSF-THVYSGGRDGNIYRTDLRN 286 (735)
T ss_pred eeCCCc-ceEEecCCCCcEEecccCC
Confidence 999988 7999999999999999988
No 97
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=5e-24 Score=214.76 Aligned_cols=310 Identities=19% Similarity=0.271 Sum_probs=228.4
Q ss_pred EEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcC
Q 046451 13 VAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLV 92 (719)
Q Consensus 13 vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~ 92 (719)
+..-|+.++|+++-... ....+++|-++.... .+.+...+-...--.|++|...+.. ..-..+++|.|+.
T Consensus 131 ~~V~psDnlIl~ar~ed-------dvs~LEvYVyn~~e~--nlYvHHD~ilpafPLC~ewld~~~~-~~~~gNyvAiGtm 200 (463)
T KOG0270|consen 131 EQVKPSDNLILCARNED-------DVSYLEVYVYNEEEE--NLYVHHDFILPAFPLCIEWLDHGSK-SGGAGNYVAIGTM 200 (463)
T ss_pred ceeccCCcEEEEeeccC-------CceEEEEEEEcCCCc--ceeEecceeccCcchhhhhhhcCCC-CCCCcceEEEecc
Confidence 34556556666664433 234567776664332 2322222222334468888655211 1122379999999
Q ss_pred CCcEEEEcCCccccC------CCCC------CCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCC
Q 046451 93 DGSIDIWNPLSLISS------GETG------GNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 93 dg~I~lwd~~~~~~~------~~~~------~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~ 160 (719)
|..|.|||++-.... .... ..+.-....+|++.|..|+|+..-.+.||+|+.|.+|++||+.+++...
T Consensus 201 dp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~ 280 (463)
T KOG0270|consen 201 DPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKS 280 (463)
T ss_pred CceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcce
Confidence 999999998532211 0000 0011122346999999999998778899999999999999999999876
Q ss_pred ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC-ceeEEecCCCCCceeEEEECCCCCcEEEEEeCC
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ-KPVISFSESIKRRCSVLQWNPDVATQLVVASDE 239 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d 239 (719)
.+ ..|...|.++.|++....+|++|+.|++|.+.|.|.. ..-..+. ..+.|..++|++.....++++.+|
T Consensus 281 s~-------~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk--~~g~VEkv~w~~~se~~f~~~tdd 351 (463)
T KOG0270|consen 281 SI-------THHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK--FDGEVEKVAWDPHSENSFFVSTDD 351 (463)
T ss_pred eh-------hhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE--eccceEEEEecCCCceeEEEecCC
Confidence 64 3477899999999998889999999999999999952 2223333 678899999999998889999998
Q ss_pred CCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe--EEEEecCCCCCeEEeEEcC
Q 046451 240 DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE--IVSELPAGTNWNFDIHWYP 317 (719)
Q Consensus 240 ~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~--~~~~l~~h~~~v~~l~~sp 317 (719)
| +|+-+|+|+..+++.++..|...|.+|+++.....++++++.|+.|++|++..-. .+..-.-.-+...|+++.+
T Consensus 352 G---~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~ 428 (463)
T KOG0270|consen 352 G---TVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDP 428 (463)
T ss_pred c---eEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCC
Confidence 8 9999999999999999999999999999998778899999999999999986432 2222111123467788889
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 318 KIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 318 dg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+-..+++.|+..+.++|||+.+...+.
T Consensus 429 ~~a~~la~GG~k~~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 429 DVAFTLAFGGEKAVLRVWDIFTNSPVR 455 (463)
T ss_pred CcceEEEecCccceEEEeecccChhHH
Confidence 888899999999999999999877654
No 98
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=1.6e-24 Score=202.45 Aligned_cols=256 Identities=19% Similarity=0.336 Sum_probs=201.6
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEe-CCCCCEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFN-SFTPNLL 139 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fs-p~~~~~l 139 (719)
..|++.|.++...--| .+|++++.|++|+|+.++. ......+.+|.+|.++|..++|. |.-+.+|
T Consensus 8 t~H~D~IHda~lDyyg--------krlATcsSD~tVkIf~v~~------n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iL 73 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYG--------KRLATCSSDGTVKIFEVRN------NGQSKLLAELTGHSGPVWKVAWAHPKFGTIL 73 (299)
T ss_pred hhhhhhhhHhhhhhhc--------ceeeeecCCccEEEEEEcC------CCCceeeeEecCCCCCeeEEeecccccCcEe
Confidence 3477888887776666 7999999999999999843 32237889999999999999994 4458899
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCC-CcEEEEEeCCCcEEEEECCCC--ceeEEecCCC
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKV-QHILASTSYNGTTVVWDLKKQ--KPVISFSESI 216 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g-~~~l~s~s~dg~I~iwd~~~~--~~~~~~~~~~ 216 (719)
|+++.||+|.||.-.++.-.+. .....|...|++++|.|.+ +.+|++++.||.|.|.+.+.. .....+...|
T Consensus 74 AScsYDgkVIiWke~~g~w~k~-----~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH 148 (299)
T KOG1332|consen 74 ASCSYDGKVIIWKEENGRWTKA-----YEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAH 148 (299)
T ss_pred eEeecCceEEEEecCCCchhhh-----hhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhcc
Confidence 9999999999999887743322 2345688899999998864 257889999999999998764 2333444479
Q ss_pred CCceeEEEECCC---C----------CcEEEEEeCCCCCCcEEEEecCCCC-CceEEeeCCCCCeeEEEeCCCCC---Ce
Q 046451 217 KRRCSVLQWNPD---V----------ATQLVVASDEDSSPALRLWDMRNTM-SPVKEFVGHTKGVIAMSWCPNDS---SY 279 (719)
Q Consensus 217 ~~~i~~l~~sp~---g----------~~~l~~~s~d~~~~~I~lwDl~~~~-~~~~~~~~h~~~V~~v~~sp~d~---~~ 279 (719)
...|++++|.|. | -+.|++|+.|+ .|+||+..+.. ..-++|.+|.+.|++++|+|..+ .+
T Consensus 149 ~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn---~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~ 225 (299)
T KOG1332|consen 149 EIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDN---LVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKST 225 (299)
T ss_pred ccccceeeecCcCCCccccccCcccccceeeccCCcc---ceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCcee
Confidence 999999999986 3 24599999998 99999998753 23355899999999999999443 48
Q ss_pred EEEEeCCCcEEEEECCCC--e-EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 280 LLTCAKDNRTICWDTVSG--E-IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 280 l~sgs~Dg~I~iwd~~~~--~-~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
|++|+.||+|.||..+.. + ....++.....++.++||..| ++|+.++.|++|.+|.-..
T Consensus 226 iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sG-n~LaVs~GdNkvtlwke~~ 287 (299)
T KOG1332|consen 226 IASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSG-NILAVSGGDNKVTLWKENV 287 (299)
T ss_pred eEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccc-cEEEEecCCcEEEEEEeCC
Confidence 999999999999976521 1 112233445679999999999 8999999999999998654
No 99
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.93 E-value=9.8e-24 Score=199.56 Aligned_cols=273 Identities=14% Similarity=0.206 Sum_probs=213.0
Q ss_pred eeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCc
Q 046451 118 HLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGT 197 (719)
Q Consensus 118 ~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~ 197 (719)
.+.+|..+++.|.|+. ++++|++|+.|.+..||-..+++.+.+ ..+|.+.|+|++.+.+. ..+++|+.|.+
T Consensus 5 ~l~GHERplTqiKyN~-eGDLlFscaKD~~~~vw~s~nGerlGt-------y~GHtGavW~~Did~~s-~~liTGSAD~t 75 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNR-EGDLLFSCAKDSTPTVWYSLNGERLGT-------YDGHTGAVWCCDIDWDS-KHLITGSADQT 75 (327)
T ss_pred ccccCccccceEEecC-CCcEEEEecCCCCceEEEecCCceeee-------ecCCCceEEEEEecCCc-ceeeeccccce
Confidence 4678999999999999 899999999999999999888887655 36799999999999885 69999999999
Q ss_pred EEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCC--CCCcEEEEecCCC------CCceEEeeCCCCCeeE
Q 046451 198 TVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED--SSPALRLWDMRNT------MSPVKEFVGHTKGVIA 269 (719)
Q Consensus 198 I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~--~~~~I~lwDl~~~------~~~~~~~~~h~~~V~~ 269 (719)
+++||+++|+++..+. ....|..+.|+.+|. +++.+.++. ..+.|.++|++.. ++++..+..+.+.++.
T Consensus 76 ~kLWDv~tGk~la~~k--~~~~Vk~~~F~~~gn-~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~ 152 (327)
T KOG0643|consen 76 AKLWDVETGKQLATWK--TNSPVKRVDFSFGGN-LILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITS 152 (327)
T ss_pred eEEEEcCCCcEEEEee--cCCeeEEEeeccCCc-EEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceee
Confidence 9999999999999998 889999999999985 455444432 3457999999843 3567788888999999
Q ss_pred EEeCCCCCCeEEEEeCCCcEEEEECCCCe-EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccC--
Q 046451 270 MSWCPNDSSYLLTCAKDNRTICWDTVSGE-IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVG-- 346 (719)
Q Consensus 270 v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~-~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~-- 346 (719)
+-|.+ -+++|++|.+||.|.+||+++|+ .+...+.|...|+++++++|. .++++++.|.+-++||+.+-++....
T Consensus 153 a~Wg~-l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~-T~FiT~s~Dttakl~D~~tl~v~Kty~t 230 (327)
T KOG0643|consen 153 ALWGP-LGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDR-TYFITGSKDTTAKLVDVRTLEVLKTYTT 230 (327)
T ss_pred eeecc-cCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCc-ceEEecccCccceeeeccceeeEEEeee
Confidence 99999 89999999999999999999984 556667899999999999999 89999999999999999998876622
Q ss_pred CCCCCCCCccCcceecCCCceeeeeCCcEEEEcc-CCCCCccc--------------cccccccceeeccCCCCCCCc
Q 046451 347 DSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHP-KSSAGHTS--------------ENSQHAPVHGVDQSKYGMVDS 409 (719)
Q Consensus 347 ~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~-~~~~~~~~--------------~~~~~~~v~~v~~s~~~~~~~ 409 (719)
+..+. +.+..+....+-.+.+-.-..+.. ....++.. ..||=+++.+||++|||..=+
T Consensus 231 e~PvN-----~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYs 303 (327)
T KOG0643|consen 231 ERPVN-----TAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYS 303 (327)
T ss_pred ccccc-----ceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccc
Confidence 22222 222222212222222222122211 11122211 388999999999999998733
No 100
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=2.6e-24 Score=207.36 Aligned_cols=295 Identities=16% Similarity=0.254 Sum_probs=236.3
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.|.+.|+.++-......+.+++.|. +.+||.++.+.+. ....+|.+.|++|.|++.+
T Consensus 146 GHkDGiW~Vaa~~tqpi~gtASADh----------TA~iWs~Esg~CL-----~~Y~GH~GSVNsikfh~s~-------- 202 (481)
T KOG0300|consen 146 GHKDGIWHVAADSTQPICGTASADH----------TARIWSLESGACL-----ATYTGHTGSVNSIKFHNSG-------- 202 (481)
T ss_pred ccccceeeehhhcCCcceeeccccc----------ceeEEeeccccce-----eeecccccceeeEEecccc--------
Confidence 4567777777766667777776555 4489999987764 4457899999999999987
Q ss_pred ceEEEEcCCCcEEEEcC------Ccccc-----C-------------------CCC-CCCCceeeeccccCCEEEEEEeC
Q 046451 85 GLVAGGLVDGSIDIWNP------LSLIS-----S-------------------GET-GGNPLIAHLSRHKGPVRGLEFNS 133 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~------~~~~~-----~-------------------~~~-~~~~~~~~l~~h~~~V~~l~fsp 133 (719)
.++++++.|++..||.. ..... . .++ .....+..|.+|.+.|.+..|..
T Consensus 203 ~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~ 282 (481)
T KOG0300|consen 203 LLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLA 282 (481)
T ss_pred ceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhc
Confidence 79999999999999972 11000 0 000 01123457889999999999998
Q ss_pred CCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC-ceeEEe
Q 046451 134 FTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ-KPVISF 212 (719)
Q Consensus 134 ~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~-~~~~~~ 212 (719)
+++.+++++.|.+-.+||+++++.+.. + .+|..+.+.++-+|. ++++++.+.|.+.++||++.. ..+..|
T Consensus 283 -gg~Q~vTaSWDRTAnlwDVEtge~v~~---L----tGHd~ELtHcstHpt-QrLVvTsSrDtTFRLWDFReaI~sV~VF 353 (481)
T KOG0300|consen 283 -GGQQMVTASWDRTANLWDVETGEVVNI---L----TGHDSELTHCSTHPT-QRLVVTSSRDTTFRLWDFREAIQSVAVF 353 (481)
T ss_pred -CcceeeeeeccccceeeeeccCceecc---c----cCcchhccccccCCc-ceEEEEeccCceeEeccchhhcceeeee
Confidence 899999999999999999999987655 2 468889999999998 579999999999999999954 345566
Q ss_pred cCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEE
Q 046451 213 SESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292 (719)
Q Consensus 213 ~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iw 292 (719)
. +|...|+++.|.-+. .++++++|. +|++||+++...++.++.. ...++.++.+. ++.+|+.--++..|++|
T Consensus 354 Q-GHtdtVTS~vF~~dd--~vVSgSDDr---TvKvWdLrNMRsplATIRt-dS~~NRvavs~-g~~iIAiPhDNRqvRlf 425 (481)
T KOG0300|consen 354 Q-GHTDTVTSVVFNTDD--RVVSGSDDR---TVKVWDLRNMRSPLATIRT-DSPANRVAVSK-GHPIIAIPHDNRQVRLF 425 (481)
T ss_pred c-ccccceeEEEEecCC--ceeecCCCc---eEEEeeeccccCcceeeec-CCccceeEeec-CCceEEeccCCceEEEE
Confidence 6 899999999999884 589999998 9999999998888888874 56889999998 77889888899999999
Q ss_pred ECCCCeEEEEe-----cCCCCCeEEeEEcCCCC-CEEEEEeCCCcEEEEeCCCC
Q 046451 293 DTVSGEIVSEL-----PAGTNWNFDIHWYPKIP-GVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 293 d~~~~~~~~~l-----~~h~~~v~~l~~spdg~-~~las~s~Dg~I~iwd~~~~ 340 (719)
|++ |..+..+ .+|...|++++|..+-+ .-|++|+.|..+.-|++..-
T Consensus 426 Dln-G~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p 478 (481)
T KOG0300|consen 426 DLN-GNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTP 478 (481)
T ss_pred ecC-CCccccCCcccccccceeeeeeeccccCcccccccccccceeeeeEeccc
Confidence 994 5555544 37888999999987642 24788999999999998764
No 101
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=1.5e-23 Score=202.54 Aligned_cols=268 Identities=16% Similarity=0.223 Sum_probs=211.9
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
.+.|++|.|++.+.+|++++.||.+ ++||+...+ +...+.|...+.+++|..+ ..
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgsl----------rlYdv~~~~------l~~~~~~~~plL~c~F~d~---------~~ 67 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSL----------RLYDVPANS------LKLKFKHGAPLLDCAFADE---------ST 67 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcE----------EEEeccchh------hhhheecCCceeeeeccCC---------ce
Confidence 3679999999999999999888876 889988552 3445678999999999986 58
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCcc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~ 166 (719)
+++|+.||.|+++|+.. .....+..|.+.|.||.+++ ..+.+++|+.|++|++||.+.......+
T Consensus 68 ~~~G~~dg~vr~~Dln~----------~~~~~igth~~~i~ci~~~~-~~~~vIsgsWD~~ik~wD~R~~~~~~~~---- 132 (323)
T KOG1036|consen 68 IVTGGLDGQVRRYDLNT----------GNEDQIGTHDEGIRCIEYSY-EVGCVISGSWDKTIKFWDPRNKVVVGTF---- 132 (323)
T ss_pred EEEeccCceEEEEEecC----------CcceeeccCCCceEEEEeec-cCCeEEEcccCccEEEEecccccccccc----
Confidence 99999999999999943 33455667999999999998 6789999999999999999874433221
Q ss_pred CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-CCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-SIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 167 ~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
.....|.++.... +.|++|+.|..|.+||+++......... ..+-.+.+|++.|++. -+++++-+| .|
T Consensus 133 ----d~~kkVy~~~v~g---~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~e-Gy~~sSieG---RV 201 (323)
T KOG1036|consen 133 ----DQGKKVYCMDVSG---NRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGE-GYVVSSIEG---RV 201 (323)
T ss_pred ----ccCceEEEEeccC---CEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCC-ceEEEeecc---eE
Confidence 1233788888764 4788999999999999998765443221 4567789999999764 577788887 67
Q ss_pred EEEecCCCC---CceEEeeCCC---------CCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEe
Q 046451 246 RLWDMRNTM---SPVKEFVGHT---------KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDI 313 (719)
Q Consensus 246 ~lwDl~~~~---~~~~~~~~h~---------~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l 313 (719)
.+=.++... +....|+.|. -+|++|+|+| -...|+||+.||.|.+||+.+.+.+..|......|.++
T Consensus 202 avE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp-~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~sl 280 (323)
T KOG1036|consen 202 AVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHP-IHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSL 280 (323)
T ss_pred EEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEecc-ccceEEecCCCceEEEccCcchhhhhhccCCCCceEEE
Confidence 665554331 2234555554 2689999999 67889999999999999999999999998877789999
Q ss_pred EEcCCCCCEEEEEe
Q 046451 314 HWYPKIPGVISASS 327 (719)
Q Consensus 314 ~~spdg~~~las~s 327 (719)
+|+.+| ..||.++
T Consensus 281 sfs~dG-~~LAia~ 293 (323)
T KOG1036|consen 281 SFSMDG-SLLAIAS 293 (323)
T ss_pred EeccCC-CeEEEEe
Confidence 999999 6777765
No 102
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=3.8e-25 Score=235.96 Aligned_cols=252 Identities=19% Similarity=0.382 Sum_probs=205.8
Q ss_pred ccceEEEcC-CCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceE
Q 046451 9 RSASVAFAP-DAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLV 87 (719)
Q Consensus 9 ~V~~vafSp-dg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~l 87 (719)
.+..|+|+. +.++|||++..|.| .+||++.......+ ....+|+..++++.|+.... .+|
T Consensus 89 S~~DVkW~~~~~NlIAT~s~nG~i----------~vWdlnk~~rnk~l--~~f~EH~Rs~~~ldfh~tep-------~il 149 (839)
T KOG0269|consen 89 SAADVKWGQLYSNLIATCSTNGVI----------SVWDLNKSIRNKLL--TVFNEHERSANKLDFHSTEP-------NIL 149 (839)
T ss_pred ehhhcccccchhhhheeecCCCcE----------EEEecCccccchhh--hHhhhhccceeeeeeccCCc-------cEE
Confidence 355678874 45799999877766 89999864333322 33457999999999999865 899
Q ss_pred EEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccC
Q 046451 88 AGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRG 167 (719)
Q Consensus 88 asgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~ 167 (719)
++|+.||.|++||+. .. .-..++.+..+.|+++.|+|..+++|+++.+.|.|.+||++...... .
T Consensus 150 iSGSQDg~vK~~DlR------~~---~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~------~ 214 (839)
T KOG0269|consen 150 ISGSQDGTVKCWDLR------SK---KSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCE------K 214 (839)
T ss_pred EecCCCceEEEEeee------cc---cccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHH------H
Confidence 999999999999994 33 45566677889999999999889999999999999999999766432 2
Q ss_pred CCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce--eEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 168 NGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP--VISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 168 ~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~--~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
....|.+.|.|+.|+|++ .+||+|+.|+.|+|||+.+.+. +.++. ....+.++.|-|+..+.|++++.-+ +..|
T Consensus 215 k~~AH~GpV~c~nwhPnr-~~lATGGRDK~vkiWd~t~~~~~~~~tIn--Tiapv~rVkWRP~~~~hLAtcsmv~-dtsV 290 (839)
T KOG0269|consen 215 KLTAHNGPVLCLNWHPNR-EWLATGGRDKMVKIWDMTDSRAKPKHTIN--TIAPVGRVKWRPARSYHLATCSMVV-DTSV 290 (839)
T ss_pred HhhcccCceEEEeecCCC-ceeeecCCCccEEEEeccCCCccceeEEe--ecceeeeeeeccCccchhhhhhccc-cceE
Confidence 245799999999999975 7999999999999999987643 44444 7789999999999988888887643 3489
Q ss_pred EEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 246 RLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
+|||++...-+..++..|...++.++|...|...|.+++.||.|..-.++++.
T Consensus 291 ~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~knat 343 (839)
T KOG0269|consen 291 HVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLFKNAT 343 (839)
T ss_pred EEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHHHHhhhhccc
Confidence 99999988888999999999999999987677899999999998766555543
No 103
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.93 E-value=2.8e-24 Score=219.43 Aligned_cols=302 Identities=16% Similarity=0.207 Sum_probs=219.6
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec-cccCCEEEEEEeCCCCCE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS-RHKGPVRGLEFNSFTPNL 138 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~fsp~~~~~ 138 (719)
..+|...|.++++.+.| ..|++|+.|..|++||+..+... . ...+.+. .....|+++.|++ .++.
T Consensus 163 l~hgtk~Vsal~~Dp~G--------aR~~sGs~Dy~v~~wDf~gMdas--~---~~fr~l~P~E~h~i~sl~ys~-Tg~~ 228 (641)
T KOG0772|consen 163 LKHGTKIVSALAVDPSG--------ARFVSGSLDYTVKFWDFQGMDAS--M---RSFRQLQPCETHQINSLQYSV-TGDQ 228 (641)
T ss_pred ccCCceEEEEeeecCCC--------ceeeeccccceEEEEeccccccc--c---hhhhccCcccccccceeeecC-CCCe
Confidence 34678889999999999 79999999999999999755421 1 1222222 2345789999999 6777
Q ss_pred EEEEeCCCcEEEEcCCCCCCCCcc-----CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeE-Ee
Q 046451 139 LASGADDGEICIWDLSAPAEPSHF-----PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVI-SF 212 (719)
Q Consensus 139 lasgs~dg~I~iwdl~~~~~~~~~-----~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~-~~ 212 (719)
|++.+.....+|+|-......... ..-....++|...++|.+|+|.....|++++.||+++|||+.+.+... .|
T Consensus 229 iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVi 308 (641)
T KOG0772|consen 229 ILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVI 308 (641)
T ss_pred EEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEE
Confidence 777787889999997654332211 001123467889999999999988899999999999999998754322 22
Q ss_pred c----CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC--ceEEeeCCCC--CeeEEEeCCCCCCeEEEEe
Q 046451 213 S----ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS--PVKEFVGHTK--GVIAMSWCPNDSSYLLTCA 284 (719)
Q Consensus 213 ~----~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~--~~~~~~~h~~--~V~~v~~sp~d~~~l~sgs 284 (719)
. .+....++.++|++||. +|++|..|| +|.+||.++... .+..-.+|.. .|+||.||. ||++|++-+
T Consensus 309 k~k~~~g~Rv~~tsC~~nrdg~-~iAagc~DG---SIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~-dg~~LlSRg 383 (641)
T KOG0772|consen 309 KTKPAGGKRVPVTSCAWNRDGK-LIAAGCLDG---SIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSY-DGNYLLSRG 383 (641)
T ss_pred eeccCCCcccCceeeecCCCcc-hhhhcccCC---ceeeeecCCcccccceEeeeccCCCCceeEEEecc-ccchhhhcc
Confidence 2 14556789999999995 699999998 999999865322 2344467877 999999999 999999999
Q ss_pred CCCcEEEEECCCC-eEEEEecCCC--CCeEEeEEcCCCCCEEEEEeC------CCcEEEEeCCCCcccccCCCCCCCCCc
Q 046451 285 KDNRTICWDTVSG-EIVSELPAGT--NWNFDIHWYPKIPGVISASSF------DGKIGIYNIEGCSRYGVGDSNFSAAPL 355 (719)
Q Consensus 285 ~Dg~I~iwd~~~~-~~~~~l~~h~--~~v~~l~~spdg~~~las~s~------Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 355 (719)
.|+++++||++.. +++.+..+-. -.-+.++|||+. .+|++|+. .|++.+||..+-..+... ++....+
T Consensus 384 ~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~-kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki--~i~~aSv 460 (641)
T KOG0772|consen 384 FDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDD-KLILTGTSAPNGMTAGTLFFFDRMTLDTVYKI--DISTASV 460 (641)
T ss_pred CCCceeeeeccccccchhhhcCCCccCCCCccccCCCc-eEEEecccccCCCCCceEEEEeccceeeEEEe--cCCCceE
Confidence 9999999999875 4555544422 235779999998 79988764 478999998887766532 3334445
Q ss_pred cCcceecCCC-ceeeeeCCc-EEEEccCCC
Q 046451 356 RAPKWYKRPA-GASFGFGGK-LVSFHPKSS 383 (719)
Q Consensus 356 ~~p~w~~~~~-~~s~s~~Gk-lv~~~~~~~ 383 (719)
....|.++.. ...-+.||. .|.|+.+.+
T Consensus 461 v~~~WhpkLNQi~~gsgdG~~~vyYdp~~S 490 (641)
T KOG0772|consen 461 VRCLWHPKLNQIFAGSGDGTAHVYYDPNES 490 (641)
T ss_pred EEEeecchhhheeeecCCCceEEEECcccc
Confidence 5667888752 333344554 566776655
No 104
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.93 E-value=9.3e-24 Score=223.00 Aligned_cols=278 Identities=17% Similarity=0.224 Sum_probs=223.6
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCcee-eeecCCCCCCCCCcc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNR-LAWGKNGSGSEDFSL 84 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~-l~~sp~g~~~~~~~~ 84 (719)
|.+.|..+++..+. .++.+++||++ ++|+-..++-.. .....++.+-|.+ +++-+...
T Consensus 13 H~~DVr~v~~~~~~-~i~s~sRd~t~----------~vw~~~~~~~l~---~~~~~~~~g~i~~~i~y~e~~~------- 71 (745)
T KOG0301|consen 13 HKSDVRAVAVTDGV-CIISGSRDGTV----------KVWAKKGKQYLE---THAFEGPKGFIANSICYAESDK------- 71 (745)
T ss_pred CccchheeEecCCe-EEeecCCCCce----------eeeeccCccccc---ceecccCcceeeccceeccccC-------
Confidence 45667777766544 77888888776 778765333222 1223446666666 77765221
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
..|++|+.|..|.+|.. ... ..+..+++|...|+|++... ++. +++||.|.+++||.+.....
T Consensus 72 ~~l~~g~~D~~i~v~~~------~~~---~P~~~LkgH~snVC~ls~~~-~~~-~iSgSWD~TakvW~~~~l~~------ 134 (745)
T KOG0301|consen 72 GRLVVGGMDTTIIVFKL------SQA---EPLYTLKGHKSNVCSLSIGE-DGT-LISGSWDSTAKVWRIGELVY------ 134 (745)
T ss_pred cceEeecccceEEEEec------CCC---CchhhhhccccceeeeecCC-cCc-eEecccccceEEecchhhhc------
Confidence 57999999999999998 445 78899999999999999765 444 99999999999998765332
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
...+|...|+++.+.+++ .+++|+.|.+|++|.- ++.+.+|. +|...|+.+++-+++ -|++++.|+ .
T Consensus 135 ---~l~gH~asVWAv~~l~e~--~~vTgsaDKtIklWk~--~~~l~tf~-gHtD~VRgL~vl~~~--~flScsNDg---~ 201 (745)
T KOG0301|consen 135 ---SLQGHTASVWAVASLPEN--TYVTGSADKTIKLWKG--GTLLKTFS-GHTDCVRGLAVLDDS--HFLSCSNDG---S 201 (745)
T ss_pred ---ccCCcchheeeeeecCCC--cEEeccCcceeeeccC--Cchhhhhc-cchhheeeeEEecCC--CeEeecCCc---e
Confidence 245689999999999985 7999999999999975 78888998 899999999999995 499999998 9
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEE
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~la 324 (719)
|++||+. .+.+.++.+|+..|++++... ++..++++++|++++||+.. ++++.+.-....|+++.+-.+| -|+
T Consensus 202 Ir~w~~~--ge~l~~~~ghtn~vYsis~~~-~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~Ng--DIv 274 (745)
T KOG0301|consen 202 IRLWDLD--GEVLLEMHGHTNFVYSISMAL-SDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNG--DIV 274 (745)
T ss_pred EEEEecc--CceeeeeeccceEEEEEEecC-CCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCC--CEE
Confidence 9999993 477899999999999999776 77899999999999999986 7888887666679999999888 366
Q ss_pred EEeCCCcEEEEeCCCCc
Q 046451 325 ASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 325 s~s~Dg~I~iwd~~~~~ 341 (719)
+|+.||.|+||..+..+
T Consensus 275 vg~SDG~VrVfT~~k~R 291 (745)
T KOG0301|consen 275 VGGSDGRVRVFTVDKDR 291 (745)
T ss_pred EeccCceEEEEEecccc
Confidence 66679999999988543
No 105
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=9.9e-22 Score=219.15 Aligned_cols=261 Identities=18% Similarity=0.339 Sum_probs=206.6
Q ss_pred ccccCccceEEEcCCCCe----EEEeeccceeecccCCCceEEEEEeeccCCcccce-eecccCCCCCceeeeecCCCCC
Q 046451 4 IKGINRSASVAFAPDAPY----MAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLL-LVGESPSSERFNRLAWGKNGSG 78 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~----Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~-~~~~~~~~~~V~~l~~sp~g~~ 78 (719)
+...++-+.++|++.|.. ||.|..||.| .+||.+.-....... +.....|.+.|..|.|++...
T Consensus 61 ~~s~~rF~kL~W~~~g~~~~GlIaGG~edG~I----------~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~- 129 (1049)
T KOG0307|consen 61 LQSSNRFNKLAWGSYGSHSHGLIAGGLEDGNI----------VLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQG- 129 (1049)
T ss_pred ccccccceeeeecccCCCccceeeccccCCce----------EEecchhhccCcchHHHhhhcccCCceeeeeccccCC-
Confidence 344577889999998875 8888887776 788877531122222 344567999999999999874
Q ss_pred CCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC
Q 046451 79 SEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE 158 (719)
Q Consensus 79 ~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~ 158 (719)
++||+|+.||.|.|||+.+.... ....-....+.|.+|+|+....++|++++.+|.+.|||++..+.
T Consensus 130 ------nlLASGa~~geI~iWDlnn~~tP-------~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~p 196 (1049)
T KOG0307|consen 130 ------NLLASGADDGEILIWDLNKPETP-------FTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKP 196 (1049)
T ss_pred ------ceeeccCCCCcEEEeccCCcCCC-------CCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCc
Confidence 69999999999999999653221 11112235678999999987788999999999999999998876
Q ss_pred CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC---cEEEEECCCC-ceeEEecCCCCCceeEEEECCCCCcEEE
Q 046451 159 PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG---TTVVWDLKKQ-KPVISFSESIKRRCSVLQWNPDVATQLV 234 (719)
Q Consensus 159 ~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg---~I~iwd~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~~l~ 234 (719)
+..+. ....+..+..|.|+|++...|++++.|. .|.+||+|.- ..+..+. +|...|.++.|++.+..+++
T Consensus 197 ii~ls-----~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~-~H~~GilslsWc~~D~~lll 270 (1049)
T KOG0307|consen 197 IIKLS-----DTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILE-GHQRGILSLSWCPQDPRLLL 270 (1049)
T ss_pred ccccc-----cCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhc-ccccceeeeccCCCCchhhh
Confidence 64431 2222346889999999988888888764 6999999875 4555665 89999999999999988999
Q ss_pred EEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 235 VASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 235 ~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
+++.|+ .|.+|+.+++ +.+.++.....++..+.|+|.+..+|++++.||.|.||.+....
T Consensus 271 SsgkD~---~ii~wN~~tg-Evl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 271 SSGKDN---RIICWNPNTG-EVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred cccCCC---CeeEecCCCc-eEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 999998 8999999875 77888888888999999999777899999999999999987543
No 106
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=1.6e-23 Score=202.40 Aligned_cols=270 Identities=16% Similarity=0.246 Sum_probs=211.3
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasg 142 (719)
-.+.|.++.|++.+ +.|++++.||++++||+.. . .++....|..++.+++|.. ...+++|
T Consensus 12 P~d~IS~v~f~~~~--------~~LLvssWDgslrlYdv~~------~----~l~~~~~~~~plL~c~F~d--~~~~~~G 71 (323)
T KOG1036|consen 12 PEDGISSVKFSPSS--------SDLLVSSWDGSLRLYDVPA------N----SLKLKFKHGAPLLDCAFAD--ESTIVTG 71 (323)
T ss_pred ChhceeeEEEcCcC--------CcEEEEeccCcEEEEeccc------h----hhhhheecCCceeeeeccC--CceEEEe
Confidence 46789999999766 6788888999999999843 2 2333345899999999975 5789999
Q ss_pred eCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeE
Q 046451 143 ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSV 222 (719)
Q Consensus 143 s~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~ 222 (719)
+.||.|+.+|+.++..... ..|...|.||.+++.. ..+++|+.|++|++||.+.......+. ....|.+
T Consensus 72 ~~dg~vr~~Dln~~~~~~i--------gth~~~i~ci~~~~~~-~~vIsgsWD~~ik~wD~R~~~~~~~~d--~~kkVy~ 140 (323)
T KOG1036|consen 72 GLDGQVRRYDLNTGNEDQI--------GTHDEGIRCIEYSYEV-GCVISGSWDKTIKFWDPRNKVVVGTFD--QGKKVYC 140 (323)
T ss_pred ccCceEEEEEecCCcceee--------ccCCCceEEEEeeccC-CeEEEcccCccEEEEeccccccccccc--cCceEEE
Confidence 9999999999998875422 3478899999999764 589999999999999999877777766 5558888
Q ss_pred EEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEe-eCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC----
Q 046451 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF-VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG---- 297 (719)
Q Consensus 223 l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~-~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~---- 297 (719)
+....+ .|++|..+. .|.+||+|+........ ..-.-.+.+|++.| ++.=+++++-||+|.+=.++..
T Consensus 141 ~~v~g~---~LvVg~~~r---~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~p-n~eGy~~sSieGRVavE~~d~s~~~~ 213 (323)
T KOG1036|consen 141 MDVSGN---RLVVGTSDR---KVLIYDLRNLDEPFQRRESSLKYQTRCVALVP-NGEGYVVSSIEGRVAVEYFDDSEEAQ 213 (323)
T ss_pred EeccCC---EEEEeecCc---eEEEEEcccccchhhhccccceeEEEEEEEec-CCCceEEEeecceEEEEccCCchHHh
Confidence 887754 577777776 89999999876544221 22345788999999 7778888999999988777655
Q ss_pred eEEEEecCCCC---------CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCcee
Q 046451 298 EIVSELPAGTN---------WNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGAS 368 (719)
Q Consensus 298 ~~~~~l~~h~~---------~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s 368 (719)
+....|+.|.. .|++|+|+|-. ..|+||+.||.|.+||+.+.+.+... .++-.....++
T Consensus 214 skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~-~tfaTgGsDG~V~~Wd~~~rKrl~q~-----------~~~~~SI~sls 281 (323)
T KOG1036|consen 214 SKKYAFKCHRLSEKDTEIIYPVNAIAFHPIH-GTFATGGSDGIVNIWDLFNRKRLKQL-----------AKYETSISSLS 281 (323)
T ss_pred hhceeEEeeecccCCceEEEEeceeEecccc-ceEEecCCCceEEEccCcchhhhhhc-----------cCCCCceEEEE
Confidence 44555666632 68999999996 79999999999999999999887632 22322345689
Q ss_pred eeeCCcEEEEccCC
Q 046451 369 FGFGGKLVSFHPKS 382 (719)
Q Consensus 369 ~s~~Gklv~~~~~~ 382 (719)
|+.||.++++...-
T Consensus 282 fs~dG~~LAia~sy 295 (323)
T KOG1036|consen 282 FSMDGSLLAIASSY 295 (323)
T ss_pred eccCCCeEEEEech
Confidence 99999999887543
No 107
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.92 E-value=9.6e-24 Score=222.89 Aligned_cols=279 Identities=20% Similarity=0.279 Sum_probs=225.8
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEE-EEEeCCCCCEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRG-LEFNSFTPNLL 139 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~-l~fsp~~~~~l 139 (719)
.+|+..|..++...+ ..++++++||++++|+-. +..+.....+.+|.+.|.+ ++|.+.++..|
T Consensus 11 ~gH~~DVr~v~~~~~---------~~i~s~sRd~t~~vw~~~-------~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l 74 (745)
T KOG0301|consen 11 EGHKSDVRAVAVTDG---------VCIISGSRDGTVKVWAKK-------GKQYLETHAFEGPKGFIANSICYAESDKGRL 74 (745)
T ss_pred ccCccchheeEecCC---------eEEeecCCCCceeeeecc-------CcccccceecccCcceeeccceeccccCcce
Confidence 568888988887766 489999999999999952 2222444667788898887 88876566679
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR 219 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~ 219 (719)
++|+.|..|.+|.+.+...... | .+|+..|++++...++ .+++|+.|.++++|... ++...+. +|...
T Consensus 75 ~~g~~D~~i~v~~~~~~~P~~~---L----kgH~snVC~ls~~~~~--~~iSgSWD~TakvW~~~--~l~~~l~-gH~as 142 (745)
T KOG0301|consen 75 VVGGMDTTIIVFKLSQAEPLYT---L----KGHKSNVCSLSIGEDG--TLISGSWDSTAKVWRIG--ELVYSLQ-GHTAS 142 (745)
T ss_pred EeecccceEEEEecCCCCchhh---h----hccccceeeeecCCcC--ceEecccccceEEecch--hhhcccC-Ccchh
Confidence 9999999999999998877655 3 4588999999988875 48999999999999754 5555566 89999
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI 299 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~ 299 (719)
|..+.+-+++ .+++|+.|. +|++|.- .+.+++|.+|.+.|+.+++-+ +..|++|+.||.|++|++ +|++
T Consensus 143 VWAv~~l~e~--~~vTgsaDK---tIklWk~---~~~l~tf~gHtD~VRgL~vl~--~~~flScsNDg~Ir~w~~-~ge~ 211 (745)
T KOG0301|consen 143 VWAVASLPEN--TYVTGSADK---TIKLWKG---GTLLKTFSGHTDCVRGLAVLD--DSHFLSCSNDGSIRLWDL-DGEV 211 (745)
T ss_pred eeeeeecCCC--cEEeccCcc---eeeeccC---CchhhhhccchhheeeeEEec--CCCeEeecCCceEEEEec-cCce
Confidence 9999999996 699999998 9999986 467899999999999999986 457899999999999999 8999
Q ss_pred EEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEc
Q 046451 300 VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFH 379 (719)
Q Consensus 300 ~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~ 379 (719)
+.++.+|++.|++++...++ .+++++++|++++||+... +.......-. .+...+-+.+...++.+.||.+.+|+
T Consensus 212 l~~~~ghtn~vYsis~~~~~-~~Ivs~gEDrtlriW~~~e--~~q~I~lPtt--siWsa~~L~NgDIvvg~SDG~VrVfT 286 (745)
T KOG0301|consen 212 LLEMHGHTNFVYSISMALSD-GLIVSTGEDRTLRIWKKDE--CVQVITLPTT--SIWSAKVLLNGDIVVGGSDGRVRVFT 286 (745)
T ss_pred eeeeeccceEEEEEEecCCC-CeEEEecCCceEEEeecCc--eEEEEecCcc--ceEEEEEeeCCCEEEeccCceEEEEE
Confidence 99999999999999966665 6999999999999999983 3332222211 11233334455678889999999998
Q ss_pred cCCC
Q 046451 380 PKSS 383 (719)
Q Consensus 380 ~~~~ 383 (719)
.+..
T Consensus 287 ~~k~ 290 (745)
T KOG0301|consen 287 VDKD 290 (745)
T ss_pred eccc
Confidence 7643
No 108
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.92 E-value=1.2e-24 Score=213.59 Aligned_cols=276 Identities=19% Similarity=0.306 Sum_probs=218.0
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
..+|.+.|.|++=+|+.. ..+++|+.||.|+|||+ ... .++.++..|.+.|.+|++.. ..+
T Consensus 62 L~gHrdGV~~lakhp~~l-------s~~aSGs~DG~VkiWnl------sqR---~~~~~f~AH~G~V~Gi~v~~---~~~ 122 (433)
T KOG0268|consen 62 LDGHRDGVSCLAKHPNKL-------STVASGSCDGEVKIWNL------SQR---ECIRTFKAHEGLVRGICVTQ---TSF 122 (433)
T ss_pred ccccccccchhhcCcchh-------hhhhccccCceEEEEeh------hhh---hhhheeecccCceeeEEecc---cce
Confidence 357999999999999753 68999999999999999 444 78899999999999999954 778
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR 219 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~ 219 (719)
++++.|.+|+.|.++.. ...++ ..++.+..|.-+..+ ..+++|+. .|.|||.....++..+. -....
T Consensus 123 ~tvgdDKtvK~wk~~~~-p~~ti--------lg~s~~~gIdh~~~~-~~FaTcGe--~i~IWD~~R~~Pv~sms-wG~Dt 189 (433)
T KOG0268|consen 123 FTVGDDKTVKQWKIDGP-PLHTI--------LGKSVYLGIDHHRKN-SVFATCGE--QIDIWDEQRDNPVSSMS-WGADS 189 (433)
T ss_pred EEecCCcceeeeeccCC-cceee--------ecccccccccccccc-ccccccCc--eeeecccccCCccceee-cCCCc
Confidence 99999999999998763 22221 123456666666554 57888876 59999999999999998 56778
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC-e
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG-E 298 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~-~ 298 (719)
|.++.|+|....+|++++.|+ .|.|||+|.. .+++.+.. ...-+.|+|+| ....|+++++|..++.||++.. +
T Consensus 190 i~svkfNpvETsILas~~sDr---sIvLyD~R~~-~Pl~KVi~-~mRTN~IswnP-eafnF~~a~ED~nlY~~DmR~l~~ 263 (433)
T KOG0268|consen 190 ISSVKFNPVETSILASCASDR---SIVLYDLRQA-SPLKKVIL-TMRTNTICWNP-EAFNFVAANEDHNLYTYDMRNLSR 263 (433)
T ss_pred eeEEecCCCcchheeeeccCC---ceEEEecccC-Cccceeee-eccccceecCc-cccceeeccccccceehhhhhhcc
Confidence 999999999888899998998 8999999986 55554432 23457899999 8899999999999999999864 5
Q ss_pred EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEE
Q 046451 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSF 378 (719)
Q Consensus 299 ~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~ 378 (719)
.+....+|.+.|.++.|||.| .-+++||.|.+|+||.+..+...... .-+=+....++.||.|.+++.-
T Consensus 264 p~~v~~dhvsAV~dVdfsptG-~EfvsgsyDksIRIf~~~~~~SRdiY----------htkRMq~V~~Vk~S~Dskyi~S 332 (433)
T KOG0268|consen 264 PLNVHKDHVSAVMDVDFSPTG-QEFVSGSYDKSIRIFPVNHGHSRDIY----------HTKRMQHVFCVKYSMDSKYIIS 332 (433)
T ss_pred cchhhcccceeEEEeccCCCc-chhccccccceEEEeecCCCcchhhh----------hHhhhheeeEEEEeccccEEEe
Confidence 678888999999999999999 79999999999999999887653311 1112223345566666666666
Q ss_pred ccCCCC
Q 046451 379 HPKSSA 384 (719)
Q Consensus 379 ~~~~~~ 384 (719)
+.+++.
T Consensus 333 GSdd~n 338 (433)
T KOG0268|consen 333 GSDDGN 338 (433)
T ss_pred cCCCcc
Confidence 655553
No 109
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=1.1e-23 Score=228.43 Aligned_cols=247 Identities=20% Similarity=0.294 Sum_probs=194.5
Q ss_pred eec-cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCC----------------------------C--C--C----
Q 046451 118 HLS-RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPA----------------------------E--P--S---- 160 (719)
Q Consensus 118 ~l~-~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~----------------------------~--~--~---- 160 (719)
.+. .|.+.|+++.|++ ||+|||+|+.|+.|+||.+...+ . . .
T Consensus 261 e~~~ah~gaIw~mKFS~-DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 261 EISNAHKGAIWAMKFSH-DGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred ccccccCCcEEEEEeCC-CCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 445 7999999999999 89999999999999999876500 0 0 0
Q ss_pred ---------cc--------CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEE
Q 046451 161 ---------HF--------PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVL 223 (719)
Q Consensus 161 ---------~~--------~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l 223 (719)
.+ ...-....+|.+.|.+|.|+.++ +|++++.|.+|+||++...+++..|. |...|+||
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~--fLLSSSMDKTVRLWh~~~~~CL~~F~--HndfVTcV 415 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN--FLLSSSMDKTVRLWHPGRKECLKVFS--HNDFVTCV 415 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheecccccCC--eeEeccccccEEeecCCCcceeeEEe--cCCeeEEE
Confidence 00 00011235788999999999984 99999999999999999999999998 99999999
Q ss_pred EECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEe
Q 046451 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSEL 303 (719)
Q Consensus 224 ~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l 303 (719)
+|+|..+++|++|+-|+ .|+||++... + +.....-..-|++++|+| ||++.++|+.+|.+++|++...+....+
T Consensus 416 aFnPvDDryFiSGSLD~---KvRiWsI~d~-~-Vv~W~Dl~~lITAvcy~P-dGk~avIGt~~G~C~fY~t~~lk~~~~~ 489 (712)
T KOG0283|consen 416 AFNPVDDRYFISGSLDG---KVRLWSISDK-K-VVDWNDLRDLITAVCYSP-DGKGAVIGTFNGYCRFYDTEGLKLVSDF 489 (712)
T ss_pred EecccCCCcEeeccccc---ceEEeecCcC-e-eEeehhhhhhheeEEecc-CCceEEEEEeccEEEEEEccCCeEEEee
Confidence 99999899999999999 8999999653 3 444444458899999999 8999999999999999999887766554
Q ss_pred cC--C------CCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcE
Q 046451 304 PA--G------TNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKL 375 (719)
Q Consensus 304 ~~--h------~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gkl 375 (719)
.- | ...|+++.|.+....-|++.+.|.+|+|||+....++.....+-. ...-..++|+.|||.
T Consensus 490 ~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n---------~~SQ~~Asfs~Dgk~ 560 (712)
T KOG0283|consen 490 HIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRN---------TSSQISASFSSDGKH 560 (712)
T ss_pred eEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhccccc---------CCcceeeeEccCCCE
Confidence 31 1 227999999987766666777799999999988777653322211 112245788889998
Q ss_pred EEEccCCCC
Q 046451 376 VSFHPKSSA 384 (719)
Q Consensus 376 v~~~~~~~~ 384 (719)
+++..++..
T Consensus 561 IVs~seDs~ 569 (712)
T KOG0283|consen 561 IVSASEDSW 569 (712)
T ss_pred EEEeecCce
Confidence 888775554
No 110
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=7.4e-23 Score=188.70 Aligned_cols=258 Identities=17% Similarity=0.258 Sum_probs=196.7
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
|.+.|+|++|||+|++||+|+.|..| ++...+...+...-.-....-|.+.|.+++|..+.+.. ..
T Consensus 88 hkgsiyc~~ws~~geliatgsndk~i----------k~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~----~~ 153 (350)
T KOG0641|consen 88 HKGSIYCTAWSPCGELIATGSNDKTI----------KVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESG----GA 153 (350)
T ss_pred cCccEEEEEecCccCeEEecCCCceE----------EEEecccccccccCcceeeeecCCceeeeEEecCCCcC----ce
Confidence 55889999999999999999888777 44433322222111112223488999999998764322 14
Q ss_pred eEEEEc-CCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 86 LVAGGL-VDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 86 ~lasgs-~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
+|++++ .|..|++-|. ..+ ..+..+.+|++.|..+- +. ++-+|++|+.|.+|++||++-...+..+..
T Consensus 154 il~s~gagdc~iy~tdc------~~g---~~~~a~sghtghilaly-sw-n~~m~~sgsqdktirfwdlrv~~~v~~l~~ 222 (350)
T KOG0641|consen 154 ILASAGAGDCKIYITDC------GRG---QGFHALSGHTGHILALY-SW-NGAMFASGSQDKTIRFWDLRVNSCVNTLDN 222 (350)
T ss_pred EEEecCCCcceEEEeec------CCC---CcceeecCCcccEEEEE-Ee-cCcEEEccCCCceEEEEeeeccceeeeccC
Confidence 566554 3445555565 556 77889999999998763 23 678999999999999999998877666422
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
-.....-..+.|.+++..|.| ++|++|-.|....+||++.++.+..|. .|...|.++.|+|.. +++++++.|. .
T Consensus 223 ~~~~~glessavaav~vdpsg-rll~sg~~dssc~lydirg~r~iq~f~-phsadir~vrfsp~a-~yllt~syd~---~ 296 (350)
T KOG0641|consen 223 DFHDGGLESSAVAAVAVDPSG-RLLASGHADSSCMLYDIRGGRMIQRFH-PHSADIRCVRFSPGA-HYLLTCSYDM---K 296 (350)
T ss_pred cccCCCcccceeEEEEECCCc-ceeeeccCCCceEEEEeeCCceeeeeC-CCccceeEEEeCCCc-eEEEEecccc---e
Confidence 221111123579999999998 699999999999999999999999998 899999999999996 7899999998 8
Q ss_pred EEEEecCCC---CCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 245 LRLWDMRNT---MSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 245 I~lwDl~~~---~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
|++-|+... ..++.....|...+..+.|++ ..--|++.+.|.++.+|-+.
T Consensus 297 ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~-~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 297 IKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHP-QDFSFISSSADKTATLWALN 349 (350)
T ss_pred EEEeecccchhhcCceEEEEeccCceEEEEecC-ccceeeeccCcceEEEeccC
Confidence 999998643 234556677999999999999 55678889999999999763
No 111
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=2.8e-23 Score=200.94 Aligned_cols=258 Identities=21% Similarity=0.318 Sum_probs=203.5
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
|...|++++.+ |.|+|+|+.|-+| +|||+........+ ..|.+.|+++.|.++.. ..
T Consensus 42 H~~sitavAVs--~~~~aSGssDetI----------~IYDm~k~~qlg~l-----l~HagsitaL~F~~~~S------~s 98 (362)
T KOG0294|consen 42 HAGSITALAVS--GPYVASGSSDETI----------HIYDMRKRKQLGIL-----LSHAGSITALKFYPPLS------KS 98 (362)
T ss_pred cccceeEEEec--ceeEeccCCCCcE----------EEEeccchhhhcce-----eccccceEEEEecCCcc------hh
Confidence 56778888876 8999999877665 89999866554433 56899999999998752 24
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
.|++|+.||.|.+|+. ... .++..++.|.+.|+.|+.+| .+++.++.+.|+.++.||+.+++.-.... +
T Consensus 99 hLlS~sdDG~i~iw~~------~~W---~~~~slK~H~~~Vt~lsiHP-S~KLALsVg~D~~lr~WNLV~Gr~a~v~~-L 167 (362)
T KOG0294|consen 99 HLLSGSDDGHIIIWRV------GSW---ELLKSLKAHKGQVTDLSIHP-SGKLALSVGGDQVLRTWNLVRGRVAFVLN-L 167 (362)
T ss_pred heeeecCCCcEEEEEc------CCe---EEeeeecccccccceeEecC-CCceEEEEcCCceeeeehhhcCccceeec-c
Confidence 8999999999999998 445 88999999999999999999 88999999999999999999887654421 2
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
+ ..-+.+.|++.|. .|+.+..+ .|-+|.+.+.+....+. ....+.++.|...+ .+++|++++ .|
T Consensus 168 ~-------~~at~v~w~~~Gd-~F~v~~~~-~i~i~q~d~A~v~~~i~--~~~r~l~~~~l~~~--~L~vG~d~~---~i 231 (362)
T KOG0294|consen 168 K-------NKATLVSWSPQGD-HFVVSGRN-KIDIYQLDNASVFREIE--NPKRILCATFLDGS--ELLVGGDNE---WI 231 (362)
T ss_pred C-------CcceeeEEcCCCC-EEEEEecc-EEEEEecccHhHhhhhh--ccccceeeeecCCc--eEEEecCCc---eE
Confidence 1 1334599999986 55555554 58999999887777666 45678888887664 688999888 89
Q ss_pred EEEecCCCCCceEEeeCCCCCeeEEEeC-CCCCCeEEEEeCCCcEEEEECCCC-----eEEEEecCCCCCeEEeEE
Q 046451 246 RLWDMRNTMSPVKEFVGHTKGVIAMSWC-PNDSSYLLTCAKDNRTICWDTVSG-----EIVSELPAGTNWNFDIHW 315 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~~h~~~V~~v~~s-p~d~~~l~sgs~Dg~I~iwd~~~~-----~~~~~l~~h~~~v~~l~~ 315 (719)
++||... ..+...+.+|...|.++.+- ..++.+|++++.||.|+|||++.. +.+.++.. +..++|+..
T Consensus 232 ~~~D~ds-~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n~-~~RltCl~~ 305 (362)
T KOG0294|consen 232 SLKDTDS-DTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDMETKKRPTLLAELNT-NVRLTCLRV 305 (362)
T ss_pred EEeccCC-CccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEccccccCCcceeEEeec-CCccceeee
Confidence 9999876 57889999999999999843 226789999999999999999865 35555543 333555443
No 112
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.92 E-value=2e-23 Score=231.66 Aligned_cols=302 Identities=17% Similarity=0.274 Sum_probs=232.1
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEc--CCCcEEEEcCCccccCCC---CCCCCceeeeccccCCEEEEEEeCCCCC
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGL--VDGSIDIWNPLSLISSGE---TGGNPLIAHLSRHKGPVRGLEFNSFTPN 137 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs--~dg~I~lwd~~~~~~~~~---~~~~~~~~~l~~h~~~V~~l~fsp~~~~ 137 (719)
+...|.+++.+|++ ..+++|+ .||.++||+.+......+ ..-.+.+.....|.+.|+|+.|++ |+.
T Consensus 12 ~~~~IfSIdv~pdg--------~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~-dG~ 82 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDG--------VKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSP-DGS 82 (942)
T ss_pred CCeeEEEEEecCCc--------eeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECC-CCC
Confidence 44568999999999 7999999 899999999865442211 112356677888999999999999 899
Q ss_pred EEEEEeCCCcEEEEcCCCCCC------------CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC
Q 046451 138 LLASGADDGEICIWDLSAPAE------------PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK 205 (719)
Q Consensus 138 ~lasgs~dg~I~iwdl~~~~~------------~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~ 205 (719)
+||+|++|+.|.||+...... ...+. ......+|...|.+++|+|++ .+|++++.|++|.|||.++
T Consensus 83 ~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk-~~~~l~~H~~DV~Dv~Wsp~~-~~lvS~s~DnsViiwn~~t 160 (942)
T KOG0973|consen 83 YLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWK-VVSILRGHDSDVLDVNWSPDD-SLLVSVSLDNSVIIWNAKT 160 (942)
T ss_pred eEeeccCcceEEEeeecccCCcccccccccccccceee-EEEEEecCCCccceeccCCCc-cEEEEecccceEEEEcccc
Confidence 999999999999999873100 00000 111234589999999999987 6999999999999999999
Q ss_pred CceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCC------CCCeeEEEeCCCCCCe
Q 046451 206 QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGH------TKGVIAMSWCPNDSSY 279 (719)
Q Consensus 206 ~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h------~~~V~~v~~sp~d~~~ 279 (719)
.+.+..+. +|.+.|-.+.|+|-| .+|++-++|+ +|+||++.+ ....+.+.++ ...+..+.||| ||.+
T Consensus 161 F~~~~vl~-~H~s~VKGvs~DP~G-ky~ASqsdDr---tikvwrt~d-w~i~k~It~pf~~~~~~T~f~RlSWSP-DG~~ 233 (942)
T KOG0973|consen 161 FELLKVLR-GHQSLVKGVSWDPIG-KYFASQSDDR---TLKVWRTSD-WGIEKSITKPFEESPLTTFFLRLSWSP-DGHH 233 (942)
T ss_pred ceeeeeee-cccccccceEECCcc-CeeeeecCCc---eEEEEEccc-ceeeEeeccchhhCCCcceeeecccCC-CcCe
Confidence 98888888 899999999999999 5799999998 999999765 2444544443 34678999999 9999
Q ss_pred EEEEe----CCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCC----CCC------------EEEEEeCCCcEEEEeCCC
Q 046451 280 LLTCA----KDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPK----IPG------------VISASSFDGKIGIYNIEG 339 (719)
Q Consensus 280 l~sgs----~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spd----g~~------------~las~s~Dg~I~iwd~~~ 339 (719)
|++.. .-.++.|.+-.+.+.-..|-+|...+..+.|+|. ... ++|+|+.|++|.||....
T Consensus 234 las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~ 313 (942)
T KOG0973|consen 234 LASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTAL 313 (942)
T ss_pred ecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCC
Confidence 99874 2347889999888888889999999999999982 111 789999999999999988
Q ss_pred CcccccCCCCCCCCCccCcceecCCC-ceeeeeCCcEEEEccCCC
Q 046451 340 CSRYGVGDSNFSAAPLRAPKWYKRPA-GASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~p~w~~~~~-~~s~s~~Gklv~~~~~~~ 383 (719)
.+.+....+.|.... ....|..+.. ..++|.||.+..|.-...
T Consensus 314 ~RPl~vi~~lf~~SI-~DmsWspdG~~LfacS~DGtV~~i~Fee~ 357 (942)
T KOG0973|consen 314 PRPLFVIHNLFNKSI-VDMSWSPDGFSLFACSLDGTVALIHFEEK 357 (942)
T ss_pred CCchhhhhhhhcCce-eeeeEcCCCCeEEEEecCCeEEEEEcchH
Confidence 888776666666442 2334655442 345566666655554443
No 113
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.92 E-value=3.4e-23 Score=197.75 Aligned_cols=296 Identities=21% Similarity=0.341 Sum_probs=228.7
Q ss_pred eEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCC-------
Q 046451 21 YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVD------- 93 (719)
Q Consensus 21 ~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~d------- 93 (719)
.+.+|+.+ ...++.+.+.+++.... .+.......+.+.|..|+-+|... ++|+++..+
T Consensus 28 cFlvgTns------lK~dNqVhll~~d~e~s--~l~skvf~h~agEvw~las~P~d~-------~ilaT~yn~~s~s~vl 92 (370)
T KOG1007|consen 28 CFLVGTNS------LKEDNQVHLLRLDSEGS--ELLSKVFFHHAGEVWDLASSPFDQ-------RILATVYNDTSDSGVL 92 (370)
T ss_pred EEEEeccc------cCCcceeEEEEecCccc--hhhhhhhhcCCcceehhhcCCCCC-------ceEEEEEeccCCCcce
Confidence 45566432 24567777777764433 333344566889999999999864 788887653
Q ss_pred CcEEEEcCCccccCCCCCCCCceeeec-cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCC-CccCCccCCCCC
Q 046451 94 GSIDIWNPLSLISSGETGGNPLIAHLS-RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEP-SHFPPLRGNGSA 171 (719)
Q Consensus 94 g~I~lwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~-~~~~~l~~~~~~ 171 (719)
-.+.||.+.+.....+....+++..+. .+-+.|.|+.|.| ++..|++-. |..|.+|++.....+ ..+ +......
T Consensus 93 ~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~P-ns~klasm~-dn~i~l~~l~ess~~vaev--~ss~s~e 168 (370)
T KOG1007|consen 93 TGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEP-NSDKLASMD-DNNIVLWSLDESSKIVAEV--LSSESAE 168 (370)
T ss_pred eeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcC-CCCeeEEec-cCceEEEEcccCcchheee--ccccccc
Confidence 247899996544322222335555555 5677999999999 778887766 789999999987763 332 2222333
Q ss_pred CCCCeEEEEecC-CCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEec
Q 046451 172 AQGEISFVSWNS-KVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDM 250 (719)
Q Consensus 172 h~~~I~~l~~sp-~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl 250 (719)
+....++-+|+| .+.+.+++ ..|+++..||+|+.++...+...|...+..+.|+|+...+|++|++|+ .|+|||.
T Consensus 169 ~~~~ftsg~WspHHdgnqv~t-t~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdg---yvriWD~ 244 (370)
T KOG1007|consen 169 MRHSFTSGAWSPHHDGNQVAT-TSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDG---YVRIWDT 244 (370)
T ss_pred ccceecccccCCCCccceEEE-eCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCc---cEEEEec
Confidence 566788899998 33345554 567899999999999999999899999999999999999999999998 8999999
Q ss_pred CCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC-----------------------------eEEE
Q 046451 251 RNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG-----------------------------EIVS 301 (719)
Q Consensus 251 ~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~-----------------------------~~~~ 301 (719)
|+.+.++.++.+|..+|.++.|++....+|++++.|..|.+|...+- ..+.
T Consensus 245 R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~ 324 (370)
T KOG1007|consen 245 RKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLE 324 (370)
T ss_pred cCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccc
Confidence 99999999999999999999999977889999999999999965320 1244
Q ss_pred EecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 302 ~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
++..|.+.|++++||.-.+.++|+-+.||++.|=++..
T Consensus 325 tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~r 362 (370)
T KOG1007|consen 325 TYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVPR 362 (370)
T ss_pred cccccccceEEEeeccCCCeeEEEeccCceEEeecCCh
Confidence 66789999999999999999999999999999877654
No 114
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.92 E-value=2.1e-23 Score=211.14 Aligned_cols=283 Identities=16% Similarity=0.238 Sum_probs=223.5
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccC----CCC---C-CCCceeee-ccccCCEEEEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISS----GET---G-GNPLIAHL-SRHKGPVRGLE 130 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~----~~~---~-~~~~~~~l-~~h~~~V~~l~ 130 (719)
...|...|.|+++++++ .++++++.||+|.-|++.+.... ... . .....+.- +.|...|.+++
T Consensus 138 ~~~H~~s~~~vals~d~--------~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~a 209 (479)
T KOG0299|consen 138 IGKHQLSVTSVALSPDD--------KRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLA 209 (479)
T ss_pred eccccCcceEEEeeccc--------cceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEE
Confidence 35688999999999998 79999999999999998654421 000 0 00111111 37999999999
Q ss_pred EeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeE
Q 046451 131 FNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVI 210 (719)
Q Consensus 131 fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~ 210 (719)
.++ |+++|++|+.|..|.|||.++.+.+..+ .+|.+.|.+++|-.. .+.|++++.|+.|++|++.....+.
T Consensus 210 vS~-Dgkylatgg~d~~v~Iw~~~t~ehv~~~-------~ghr~~V~~L~fr~g-t~~lys~s~Drsvkvw~~~~~s~ve 280 (479)
T KOG0299|consen 210 VSS-DGKYLATGGRDRHVQIWDCDTLEHVKVF-------KGHRGAVSSLAFRKG-TSELYSASADRSVKVWSIDQLSYVE 280 (479)
T ss_pred EcC-CCcEEEecCCCceEEEecCcccchhhcc-------cccccceeeeeeecC-ccceeeeecCCceEEEehhHhHHHH
Confidence 999 8999999999999999999998876652 468899999999665 5689999999999999999888888
Q ss_pred EecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEE
Q 046451 211 SFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI 290 (719)
Q Consensus 211 ~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~ 290 (719)
++. +|...|..|.-..-+ ..+.+|+.|. ++++|++.. +....+.+|.+.+-|++|- +...|++|+.||.|.
T Consensus 281 tly-GHqd~v~~IdaL~re-R~vtVGgrDr---T~rlwKi~e--esqlifrg~~~sidcv~~I--n~~HfvsGSdnG~Ia 351 (479)
T KOG0299|consen 281 TLY-GHQDGVLGIDALSRE-RCVTVGGRDR---TVRLWKIPE--ESQLIFRGGEGSIDCVAFI--NDEHFVSGSDNGSIA 351 (479)
T ss_pred HHh-CCccceeeechhccc-ceEEeccccc---eeEEEeccc--cceeeeeCCCCCeeeEEEe--cccceeeccCCceEE
Confidence 887 899999999887665 4666777887 999999943 4456688899999999998 568899999999999
Q ss_pred EEECCCCeEEEEecC------------CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc--cCCCCCCCCCcc
Q 046451 291 CWDTVSGEIVSELPA------------GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG--VGDSNFSAAPLR 356 (719)
Q Consensus 291 iwd~~~~~~~~~l~~------------h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~--~~~~~~~~~~~~ 356 (719)
+|++.+.+.+++... +..||++|+..+.. .++++|+++|.|++|.++.+.... ..+- .
T Consensus 352 LWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~s-dL~asGS~~G~vrLW~i~~g~r~i~~l~~l-------s 423 (479)
T KOG0299|consen 352 LWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGS-DLLASGSWSGCVRLWKIEDGLRAINLLYSL-------S 423 (479)
T ss_pred EeeecccCceeEeeccccccCCccccccccceeeeEecccC-ceEEecCCCCceEEEEecCCccccceeeec-------c
Confidence 999998888876542 12399999999987 899999999999999999884311 1111 1
Q ss_pred CcceecCCCceeeeeCCcEEEEc
Q 046451 357 APKWYKRPAGASFGFGGKLVSFH 379 (719)
Q Consensus 357 ~p~w~~~~~~~s~s~~Gklv~~~ 379 (719)
...|. ..++|+.+||.+..+
T Consensus 424 ~~GfV---Nsl~f~~sgk~ivag 443 (479)
T KOG0299|consen 424 LVGFV---NSLAFSNSGKRIVAG 443 (479)
T ss_pred cccEE---EEEEEccCCCEEEEe
Confidence 22243 458899999944433
No 115
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=1.4e-23 Score=202.22 Aligned_cols=296 Identities=15% Similarity=0.268 Sum_probs=234.9
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
..+|++.|+.++-.... .++.+++.|.+.+||.+ +++ .++..+.+|.+.|++|+|++ .+.++
T Consensus 144 ~~GHkDGiW~Vaa~~tq--------pi~gtASADhTA~iWs~------Esg---~CL~~Y~GH~GSVNsikfh~-s~~L~ 205 (481)
T KOG0300|consen 144 LEGHKDGIWHVAADSTQ--------PICGTASADHTARIWSL------ESG---ACLATYTGHTGSVNSIKFHN-SGLLL 205 (481)
T ss_pred hcccccceeeehhhcCC--------cceeecccccceeEEee------ccc---cceeeecccccceeeEEecc-ccceE
Confidence 46799999999876654 58999999999999999 677 99999999999999999999 88999
Q ss_pred EEEeCCCcEEEEcC------CCCC---------CCC------------------ccCCccCCCCCCCCCeEEEEecCCCC
Q 046451 140 ASGADDGEICIWDL------SAPA---------EPS------------------HFPPLRGNGSAAQGEISFVSWNSKVQ 186 (719)
Q Consensus 140 asgs~dg~I~iwdl------~~~~---------~~~------------------~~~~l~~~~~~h~~~I~~l~~sp~g~ 186 (719)
++++.|++-+||.. .... ... .+........+|.+.|.+..|...|
T Consensus 206 lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg- 284 (481)
T KOG0300|consen 206 LTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGG- 284 (481)
T ss_pred EEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCc-
Confidence 99999999999962 1100 000 0000111234577888899998876
Q ss_pred cEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCC
Q 046451 187 HILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKG 266 (719)
Q Consensus 187 ~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~ 266 (719)
..+++++.|.+..+||+++++.+..+. +|....+.++-+|.. .++++++.|. +.++||++..-..+..|.||...
T Consensus 285 ~Q~vTaSWDRTAnlwDVEtge~v~~Lt-GHd~ELtHcstHptQ-rLVvTsSrDt---TFRLWDFReaI~sV~VFQGHtdt 359 (481)
T KOG0300|consen 285 QQMVTASWDRTANLWDVETGEVVNILT-GHDSELTHCSTHPTQ-RLVVTSSRDT---TFRLWDFREAIQSVAVFQGHTDT 359 (481)
T ss_pred ceeeeeeccccceeeeeccCceecccc-CcchhccccccCCcc-eEEEEeccCc---eeEeccchhhcceeeeecccccc
Confidence 589999999999999999999999998 899999999999996 6788888887 99999999766667889999999
Q ss_pred eeEEEeCCCCCCeEEEEeCCCcEEEEECCCC-eEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccccc
Q 046451 267 VIAMSWCPNDSSYLLTCAKDNRTICWDTVSG-EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345 (719)
Q Consensus 267 V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~-~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~ 345 (719)
|+++.|.- +..+++|++|.+|+|||+++. ..+.++... ..++.++.+..+ .+|+.--++..|++||+++.++...
T Consensus 360 VTS~vF~~--dd~vVSgSDDrTvKvWdLrNMRsplATIRtd-S~~NRvavs~g~-~iIAiPhDNRqvRlfDlnG~RlaRl 435 (481)
T KOG0300|consen 360 VTSVVFNT--DDRVVSGSDDRTVKVWDLRNMRSPLATIRTD-SPANRVAVSKGH-PIIAIPHDNRQVRLFDLNGNRLARL 435 (481)
T ss_pred eeEEEEec--CCceeecCCCceEEEeeeccccCcceeeecC-CccceeEeecCC-ceEEeccCCceEEEEecCCCccccC
Confidence 99999986 467999999999999999875 467777654 458889999877 6888888889999999998876542
Q ss_pred CCCC--CCCCCccCcceecCC---CceeeeeCCcEEEEccCCC
Q 046451 346 GDSN--FSAAPLRAPKWYKRP---AGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 346 ~~~~--~~~~~~~~p~w~~~~---~~~s~s~~Gklv~~~~~~~ 383 (719)
.... -.-.-+.+.+|+... ..+++|||..+..|.-+..
T Consensus 436 PrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p 478 (481)
T KOG0300|consen 436 PRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTP 478 (481)
T ss_pred CcccccccceeeeeeeccccCcccccccccccceeeeeEeccc
Confidence 2111 000112466788764 3468899999988876543
No 116
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.92 E-value=7.9e-23 Score=205.16 Aligned_cols=246 Identities=17% Similarity=0.264 Sum_probs=207.7
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEe
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA 143 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs 143 (719)
...+.++...+.. ..+++|+.|..+.++|. ..+ +.+..+.+|...|+.+.|++ +...+++++
T Consensus 219 ~pgi~ald~~~s~--------~~ilTGG~d~~av~~d~------~s~---q~l~~~~Gh~kki~~v~~~~-~~~~v~~aS 280 (506)
T KOG0289|consen 219 TPGITALDIIPSS--------SKILTGGEDKTAVLFDK------PSN---QILATLKGHTKKITSVKFHK-DLDTVITAS 280 (506)
T ss_pred CCCeeEEeecCCC--------CcceecCCCCceEEEec------chh---hhhhhccCcceEEEEEEecc-chhheeecC
Confidence 3456777777763 68999999999999998 555 88999999999999999999 788999999
Q ss_pred CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-CCCCceeE
Q 046451 144 DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-SIKRRCSV 222 (719)
Q Consensus 144 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-~~~~~i~~ 222 (719)
.|..|+||.......... ...|++.|+.+..++.|. +|++++.||++.+.|++++..+..... ...-.+++
T Consensus 281 ad~~i~vws~~~~s~~~~-------~~~h~~~V~~ls~h~tge-YllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts 352 (506)
T KOG0289|consen 281 ADEIIRVWSVPLSSEPTS-------SRPHEEPVTGLSLHPTGE-YLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTS 352 (506)
T ss_pred CcceEEeeccccccCccc-------cccccccceeeeeccCCc-EEEEecCCceEEEEEccCCcEEEEEeeccccceeEE
Confidence 999999999887665433 235888999999999984 999999999999999999998887773 24466899
Q ss_pred EEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEE
Q 046451 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSE 302 (719)
Q Consensus 223 l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~ 302 (719)
.+||||| .+|.+|..|+ .|+|||+.+. ..+..|.+|++.|..|+|+. +|.+|+++++|+.|++||++..+.+.+
T Consensus 353 ~~fHpDg-Lifgtgt~d~---~vkiwdlks~-~~~a~Fpght~~vk~i~FsE-NGY~Lat~add~~V~lwDLRKl~n~kt 426 (506)
T KOG0289|consen 353 AAFHPDG-LIFGTGTPDG---VVKIWDLKSQ-TNVAKFPGHTGPVKAISFSE-NGYWLATAADDGSVKLWDLRKLKNFKT 426 (506)
T ss_pred eeEcCCc-eEEeccCCCc---eEEEEEcCCc-cccccCCCCCCceeEEEecc-CceEEEEEecCCeEEEEEehhhcccce
Confidence 9999998 6888999998 9999999876 46788999999999999998 999999999999999999998887777
Q ss_pred ecCCC-CCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 303 LPAGT-NWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 303 l~~h~-~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
+.... ..+.+++|...| .+|+.++.|=.|++++-.+.+.
T Consensus 427 ~~l~~~~~v~s~~fD~SG-t~L~~~g~~l~Vy~~~k~~k~W 466 (506)
T KOG0289|consen 427 IQLDEKKEVNSLSFDQSG-TYLGIAGSDLQVYICKKKTKSW 466 (506)
T ss_pred eeccccccceeEEEcCCC-CeEEeecceeEEEEEecccccc
Confidence 65432 369999999999 6777777676666666544443
No 117
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.91 E-value=2.2e-24 Score=201.85 Aligned_cols=245 Identities=14% Similarity=0.205 Sum_probs=203.8
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.|.+.|++...+.+....|+++.|=+- +|||.-++... .++.|+..|..++|+.|.
T Consensus 57 ghkgavw~~~l~~na~~aasaaadfta----------kvw~a~tgdel------hsf~hkhivk~~af~~ds-------- 112 (334)
T KOG0278|consen 57 GHKGAVWSATLNKNATRAASAAADFTA----------KVWDAVTGDEL------HSFEHKHIVKAVAFSQDS-------- 112 (334)
T ss_pred ccCcceeeeecCchhhhhhhhcccchh----------hhhhhhhhhhh------hhhhhhheeeeEEecccc--------
Confidence 466778888888777777777655443 88998766543 346799999999999998
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
++|++|+.+..++|||++.. . .....+.+|.+.|..+.|+. ..+.|++++.|++|++||.+++..+..+
T Consensus 113 ~~lltgg~ekllrvfdln~p-----~---App~E~~ghtg~Ir~v~wc~-eD~~iLSSadd~tVRLWD~rTgt~v~sL-- 181 (334)
T KOG0278|consen 113 NYLLTGGQEKLLRVFDLNRP-----K---APPKEISGHTGGIRTVLWCH-EDKCILSSADDKTVRLWDHRTGTEVQSL-- 181 (334)
T ss_pred hhhhccchHHHhhhhhccCC-----C---CCchhhcCCCCcceeEEEec-cCceEEeeccCCceEEEEeccCcEEEEE--
Confidence 79999999999999999642 2 56677889999999999998 6788888899999999999999887664
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
. ....|+++.++++|. +++....+.|.+||..+...+..+. ....|.+..++|+. .++++|+.|. .
T Consensus 182 -~-----~~s~VtSlEvs~dG~--ilTia~gssV~Fwdaksf~~lKs~k--~P~nV~SASL~P~k-~~fVaGged~---~ 247 (334)
T KOG0278|consen 182 -E-----FNSPVTSLEVSQDGR--ILTIAYGSSVKFWDAKSFGLLKSYK--MPCNVESASLHPKK-EFFVAGGEDF---K 247 (334)
T ss_pred -e-----cCCCCcceeeccCCC--EEEEecCceeEEeccccccceeecc--CccccccccccCCC-ceEEecCcce---E
Confidence 2 244899999999974 5566677889999999999998887 67788999999997 6888899888 8
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI 299 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~ 299 (719)
++.||..++.+...-..+|-+.|.|+.|+| ||...++|++||+|+||.+..++.
T Consensus 248 ~~kfDy~TgeEi~~~nkgh~gpVhcVrFSP-dGE~yAsGSEDGTirlWQt~~~~~ 301 (334)
T KOG0278|consen 248 VYKFDYNTGEEIGSYNKGHFGPVHCVRFSP-DGELYASGSEDGTIRLWQTTPGKT 301 (334)
T ss_pred EEEEeccCCceeeecccCCCCceEEEEECC-CCceeeccCCCceEEEEEecCCCc
Confidence 999999887553333489999999999999 999999999999999998876543
No 118
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.91 E-value=7.5e-23 Score=195.81 Aligned_cols=278 Identities=17% Similarity=0.242 Sum_probs=211.2
Q ss_pred ccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCC--cc------CCccCCCCCCCCCeEEEEecCCCCcEEEE
Q 046451 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPS--HF------PPLRGNGSAAQGEISFVSWNSKVQHILAS 191 (719)
Q Consensus 120 ~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~--~~------~~l~~~~~~h~~~I~~l~~sp~g~~~l~s 191 (719)
..|.+.|+.+...+..++++++|+.||.|.+||+++..... -+ ..-+.+..+|+-.|.++.|.|-+.-+|.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 34889999999999889999999999999999998654111 00 01234556788899999999977679999
Q ss_pred EeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCC--CcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeE
Q 046451 192 TSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDV--ATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIA 269 (719)
Q Consensus 192 ~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g--~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~ 269 (719)
++.|.++++||..+.+....|. ..+.|.+-+|+|-. ..++++|..+- .|++.|+..+ ..-+++.||..+|.+
T Consensus 120 sSFDhtlKVWDtnTlQ~a~~F~--me~~VYshamSp~a~sHcLiA~gtr~~---~VrLCDi~SG-s~sH~LsGHr~~vla 193 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQEAVDFK--MEGKVYSHAMSPMAMSHCLIAAGTRDV---QVRLCDIASG-SFSHTLSGHRDGVLA 193 (397)
T ss_pred ccccceEEEeecccceeeEEee--cCceeehhhcChhhhcceEEEEecCCC---cEEEEeccCC-cceeeeccccCceEE
Confidence 9999999999999999988887 78889999998854 24556666665 8999999876 778999999999999
Q ss_pred EEeCCCCCCeEEEEeCCCcEEEEECCCC-eEEEEec--------------CCCCCeEEeEEcCCCCCEEEEEeCCCcEEE
Q 046451 270 MSWCPNDSSYLLTCAKDNRTICWDTVSG-EIVSELP--------------AGTNWNFDIHWYPKIPGVISASSFDGKIGI 334 (719)
Q Consensus 270 v~~sp~d~~~l~sgs~Dg~I~iwd~~~~-~~~~~l~--------------~h~~~v~~l~~spdg~~~las~s~Dg~I~i 334 (719)
+.|+|...-.|++|+.||.|++||++.. -+...++ .|.+.|++++|+.++ ..+++++.|.++++
T Consensus 194 V~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~-~~l~~~gtd~r~r~ 272 (397)
T KOG4283|consen 194 VEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDA-RYLASCGTDDRIRV 272 (397)
T ss_pred EEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccc-hhhhhccCccceEE
Confidence 9999966667899999999999999854 3333332 466789999999999 79999999999999
Q ss_pred EeCCCCcccccCCCCCCCCCccCcceecC----CCceeeeeCCcEEEEccCCCCCccccccccccceeeccCCC
Q 046451 335 YNIEGCSRYGVGDSNFSAAPLRAPKWYKR----PAGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKY 404 (719)
Q Consensus 335 wd~~~~~~~~~~~~~~~~~~~~~p~w~~~----~~~~s~s~~Gklv~~~~~~~~~~~~~~~~~~~v~~v~~s~~ 404 (719)
|+.++|+.....-......+...++...+ ...+-|-.+|.+..+...+++-++-+.+|--.|.++.+-+|
T Consensus 273 wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~ 346 (397)
T KOG4283|consen 273 WNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPD 346 (397)
T ss_pred eecccCcccccccccccccccccceEEEeecccceEEEEecCCeEEEEEccCceEEEeeecccceeeEEeecCc
Confidence 99999987553322222222233333321 23345555667777777777777778999444555554443
No 119
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.91 E-value=5e-23 Score=203.30 Aligned_cols=260 Identities=21% Similarity=0.411 Sum_probs=204.4
Q ss_pred cccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccC-------CCCCCCCceeeeccccCCEEEEEE
Q 046451 59 GESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISS-------GETGGNPLIAHLSRHKGPVRGLEF 131 (719)
Q Consensus 59 ~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~-------~~~~~~~~~~~l~~h~~~V~~l~f 131 (719)
....|.+.++.+.-++-+. ..+.++=+..|.|+||++...... ......+.+.++.+|.+.=+.|+|
T Consensus 146 ~~i~h~g~~NRvr~~~~~~------~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdW 219 (440)
T KOG0302|consen 146 KSIPHYGGINRVRVSRLGN------EVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDW 219 (440)
T ss_pred cccccccccceeeecccCC------cceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeec
Confidence 3456777788887776652 147777788999999998543321 111234778899999999999999
Q ss_pred eCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC---ce
Q 046451 132 NSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KP 208 (719)
Q Consensus 132 sp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~---~~ 208 (719)
||.....|++|..-+.|++|...++.-...- ....+|...|..|+|+|....+|++|+.||+|+|||+|.+ .+
T Consensus 220 Sp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~----~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~ 295 (440)
T KOG0302|consen 220 SPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQ----RPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAA 295 (440)
T ss_pred ccccccccccCccccceEeeeeccCceeecC----ccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccce
Confidence 9977778999999999999999885533221 1223488899999999998889999999999999999998 33
Q ss_pred eEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCC--CCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCC
Q 046451 209 VISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNT--MSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD 286 (719)
Q Consensus 209 ~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~--~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~D 286 (719)
+.+ ..|.+.|+.|.|+.+-. +|++|+++| +++|||+|.. ..++..|.-|...|++|.|+|.+...|++++.|
T Consensus 296 ~~~--kAh~sDVNVISWnr~~~-lLasG~DdG---t~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D 369 (440)
T KOG0302|consen 296 VST--KAHNSDVNVISWNRREP-LLASGGDDG---TLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGED 369 (440)
T ss_pred eEe--eccCCceeeEEccCCcc-eeeecCCCc---eEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCC
Confidence 333 37999999999999875 899999998 9999999864 367889999999999999999888999999999
Q ss_pred CcEEEEECCCCe-------------------EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEE
Q 046451 287 NRTICWDTVSGE-------------------IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIY 335 (719)
Q Consensus 287 g~I~iwd~~~~~-------------------~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iw 335 (719)
++|.|||+.--. +++. ......+..+.|++.-+.+|++.+.||.-.+.
T Consensus 370 ~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFV-HqGQke~KevhWH~QiPG~lvsTa~dGfnVfk 436 (440)
T KOG0302|consen 370 NQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFV-HQGQKEVKEVHWHRQIPGLLVSTAIDGFNVFK 436 (440)
T ss_pred CcEEEEEeeccCChhhhccccccchhcCCceeEEE-ecchhHhhhheeccCCCCeEEEecccceeEEE
Confidence 999999985211 1111 22345688999999988999999988854433
No 120
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.91 E-value=2.2e-22 Score=216.56 Aligned_cols=335 Identities=17% Similarity=0.194 Sum_probs=254.6
Q ss_pred cccccc-CccceEEEcCCCC-eEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCC
Q 046451 2 ACIKGI-NRSASVAFAPDAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGS 79 (719)
Q Consensus 2 ~~l~~~-~~V~~vafSpdg~-~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~ 79 (719)
+.+++. ++|++++|.-||+ +||+|+..|.+ -+||++...... .....|.+.|....|.+..
T Consensus 238 ~sFk~d~g~VtslSFrtDG~p~las~~~~G~m----------~~wDLe~kkl~~----v~~nah~~sv~~~~fl~~e--- 300 (910)
T KOG1539|consen 238 MSFKQDWGRVTSLSFRTDGNPLLASGRSNGDM----------AFWDLEKKKLIN----VTRNAHYGSVTGATFLPGE--- 300 (910)
T ss_pred EEEEccccceeEEEeccCCCeeEEeccCCceE----------EEEEcCCCeeee----eeeccccCCcccceecCCC---
Confidence 345665 8999999999996 66777665655 899998543322 2234578899999999876
Q ss_pred CCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC-
Q 046451 80 EDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE- 158 (719)
Q Consensus 80 ~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~- 158 (719)
-+|++.+.|..+++|-.++. + +..+.++.-.+|..+-.||.|.-..+..+.+++.|++++.+++.....
T Consensus 301 -----pVl~ta~~DnSlk~~vfD~~----d-g~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~ 370 (910)
T KOG1539|consen 301 -----PVLVTAGADNSLKVWVFDSG----D-GVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQS 370 (910)
T ss_pred -----ceEeeccCCCceeEEEeeCC----C-CcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHh
Confidence 69999999999999987531 1 223666677789999999999865788999999998877776432100
Q ss_pred --------------CCcc-------CC-----------------------------------------ccC-CCCCCCCC
Q 046451 159 --------------PSHF-------PP-----------------------------------------LRG-NGSAAQGE 175 (719)
Q Consensus 159 --------------~~~~-------~~-----------------------------------------l~~-~~~~h~~~ 175 (719)
...+ ++ +.. ........
T Consensus 371 ~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~ 450 (910)
T KOG1539|consen 371 QELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDIN 450 (910)
T ss_pred HhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcc
Confidence 0000 00 000 00011246
Q ss_pred eEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec--CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCC
Q 046451 176 ISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS--ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNT 253 (719)
Q Consensus 176 I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~--~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~ 253 (719)
+++++.+..| ++.+.|+..|.|.+|++.+|-...+|. ..|...|+.++.+.-+ ..+++++.+| .+++||..+.
T Consensus 451 ~~av~vs~CG-NF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n-~~~vsa~~~G---ilkfw~f~~k 525 (910)
T KOG1539|consen 451 ATAVCVSFCG-NFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTN-RLLVSAGADG---ILKFWDFKKK 525 (910)
T ss_pred eEEEEEeccC-ceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCC-ceEEEccCcc---eEEEEecCCc
Confidence 7888888887 689999999999999999998888883 2699999999999887 5788888888 8999999764
Q ss_pred CCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEE
Q 046451 254 MSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333 (719)
Q Consensus 254 ~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~ 333 (719)
..+..+. -...+.++..+. ...+++++.+|-.|+++|..+.+.+++|.+|.+.|++++||+|| ++|++++.|++|+
T Consensus 526 -~l~~~l~-l~~~~~~iv~hr-~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~Dg-rWlisasmD~tIr 601 (910)
T KOG1539|consen 526 -VLKKSLR-LGSSITGIVYHR-VSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDG-RWLISASMDSTIR 601 (910)
T ss_pred -ceeeeec-cCCCcceeeeee-hhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCC-cEEEEeecCCcEE
Confidence 3444443 345778888888 78899999999999999999999999999999999999999999 8999999999999
Q ss_pred EEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCCC
Q 046451 334 IYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 334 iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~~ 384 (719)
+||+-++.++....- ..+ .+.++|+++|.+++-.-.+..
T Consensus 602 ~wDlpt~~lID~~~v-------d~~-----~~sls~SPngD~LAT~Hvd~~ 640 (910)
T KOG1539|consen 602 TWDLPTGTLIDGLLV-------DSP-----CTSLSFSPNGDFLATVHVDQN 640 (910)
T ss_pred EEeccCcceeeeEec-------CCc-----ceeeEECCCCCEEEEEEecCc
Confidence 999999988651110 111 245789999998876655543
No 121
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.91 E-value=6.3e-23 Score=214.76 Aligned_cols=299 Identities=21% Similarity=0.326 Sum_probs=212.0
Q ss_pred eEEEcCCC---CeEEEeeccceeecccCCCceEEEEEeeccCCc-ccceeecccCCCCCceeeeecCCCCCCCCCccceE
Q 046451 12 SVAFAPDA---PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSED-RDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLV 87 (719)
Q Consensus 12 ~vafSpdg---~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~-~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~l 87 (719)
++.|++.- ..||.+..+|.| .++|....... .+..+.....|...|.++.|-+ ++ ..|
T Consensus 54 ~~sFs~~~n~eHiLavadE~G~i----------~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wap-ge-------~~l 115 (720)
T KOG0321|consen 54 ADSFSAAPNKEHILAVADEDGGI----------ILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAP-GE-------SLL 115 (720)
T ss_pred cccccCCCCccceEEEecCCCce----------eeecchhhhcchhhhhhcccccccceeEeeccCC-Cc-------eeE
Confidence 35676632 478889888876 56665533222 1222345567999999999999 43 799
Q ss_pred EEEcCCCcEEEEcCCccccCCCCCCCCcee--eeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCC-----
Q 046451 88 AGGLVDGSIDIWNPLSLISSGETGGNPLIA--HLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPS----- 160 (719)
Q Consensus 88 asgs~dg~I~lwd~~~~~~~~~~~~~~~~~--~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~----- 160 (719)
++.+.|.++++||+. .. .++. .+.+|.+.|.+++|.+++...|++|+.||.|.|||++......
T Consensus 116 VsasGDsT~r~Wdvk------~s---~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~ 186 (720)
T KOG0321|consen 116 VSASGDSTIRPWDVK------TS---RLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFD 186 (720)
T ss_pred EEccCCceeeeeeec------cc---eeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHh
Confidence 999999999999994 33 4443 4889999999999999999999999999999999987543100
Q ss_pred ------------ccCCccC---CCCCCCCC----eEEEEecCCCCcEEEEEeC-CCcEEEEECCCCceeEEecC------
Q 046451 161 ------------HFPPLRG---NGSAAQGE----ISFVSWNSKVQHILASTSY-NGTTVVWDLKKQKPVISFSE------ 214 (719)
Q Consensus 161 ------------~~~~l~~---~~~~h~~~----I~~l~~sp~g~~~l~s~s~-dg~I~iwd~~~~~~~~~~~~------ 214 (719)
....+.. ....+... |+.+.| .|. ..|++++. |+.|+|||+++.........
T Consensus 187 ~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~f-kDe-~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~ 264 (720)
T KOG0321|consen 187 NRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLF-KDE-STLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKY 264 (720)
T ss_pred hhhhccccCCCCCCchhhccccccccccCceeeeeEEEEE-ecc-ceeeeccCCCcceEEEeecccccccccCCCcccCc
Confidence 0000110 11122233 444555 443 57888887 99999999998654332211
Q ss_pred -CC---CCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC-CceEEeeCCCCCe--eEEEeCCCCCCeEEEEeCCC
Q 046451 215 -SI---KRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM-SPVKEFVGHTKGV--IAMSWCPNDSSYLLTCAKDN 287 (719)
Q Consensus 215 -~~---~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~-~~~~~~~~h~~~V--~~v~~sp~d~~~l~sgs~Dg 287 (719)
.+ ...+.++..+..|.++++.|. |+ +|++||++... .++..+.++...- ..-..++ |+.+|++|+.|.
T Consensus 265 ~t~skrs~G~~nL~lDssGt~L~AsCt-D~---sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSp-d~~~l~SgSsd~ 339 (720)
T KOG0321|consen 265 PTHSKRSVGQVNLILDSSGTYLFASCT-DN---SIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSP-DDCSLLSGSSDE 339 (720)
T ss_pred cCcccceeeeEEEEecCCCCeEEEEec-CC---cEEEEeccccCcCchhhccCcccceeeeeeecCC-CCceEeccCCCc
Confidence 12 345778888888887777777 54 79999998643 3444454443211 1224578 889999999999
Q ss_pred cEEEEECCCCe-EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 288 RTICWDTVSGE-IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 288 ~I~iwd~~~~~-~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
..++|.+.+-+ ....+.+|...|++++|.+..-.-++++++|.+++||++.++....
T Consensus 340 ~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~l~e~ 397 (720)
T KOG0321|consen 340 QAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNGLEEI 397 (720)
T ss_pred ceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCchhhc
Confidence 99999998754 4566789999999999999765668888999999999997765544
No 122
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.91 E-value=1.4e-22 Score=193.87 Aligned_cols=301 Identities=19% Similarity=0.314 Sum_probs=228.7
Q ss_pred cceEEEcC--CC-CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 10 SASVAFAP--DA-PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 10 V~~vafSp--dg-~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
++++.||- |. .+||.|+... ...+.|.|..++ +...++.....++|...++.+.|.|+..+. ..++
T Consensus 47 lya~~Ws~~~~~~~rla~gS~~E------e~~Nkvqiv~ld--~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~---~pdl 115 (364)
T KOG0290|consen 47 LYAMNWSVRPDKKFRLAVGSFIE------EYNNKVQIVQLD--EDSGELVEDANFDHPYPVTKLMWIPDSKGV---YPDL 115 (364)
T ss_pred eeeeccccCCCcceeEEEeeecc------ccCCeeEEEEEc--cCCCceeccCCCCCCCCccceEecCCcccc---Ccch
Confidence 56788884 33 4899997543 245677777776 333444445568899999999999986422 1267
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceee-----eccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAH-----LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSH 161 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~-----l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~ 161 (719)
||++ +..++||.+..... ...+... -..+..++++..|+..+.++|.+++-|-+..|||++++.. ..
T Consensus 116 LATs--~D~LRlWri~~ee~-----~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~-~~ 187 (364)
T KOG0290|consen 116 LATS--SDFLRLWRIGDEES-----RVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVS-GT 187 (364)
T ss_pred hhcc--cCeEEEEeccCcCC-----ceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccc-cc
Confidence 7776 45799999853211 0011111 2346678999999999999999999999999999998722 11
Q ss_pred cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC--CCCCceeEEEECCCCCcEEEEEeCC
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE--SIKRRCSVLQWNPDVATQLVVASDE 239 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~--~~~~~i~~l~~sp~g~~~l~~~s~d 239 (719)
++.....|..+|.+|+|...+..+|++.+.||.|++||+|..+....+.+ ........++|+....+++++-..|
T Consensus 188 ---vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~d 264 (364)
T KOG0290|consen 188 ---VKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMD 264 (364)
T ss_pred ---eeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcC
Confidence 34445679999999999998888999999999999999998765444432 2256788999999988888888777
Q ss_pred CCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe------EEEEecCCCCCeEEe
Q 046451 240 DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE------IVSELPAGTNWNFDI 313 (719)
Q Consensus 240 ~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~------~~~~l~~h~~~v~~l 313 (719)
.. .|.|.|+|....++.++.+|...|+.|+|.|.....|++|++|..+.|||+.+.- .+..+. ....|..+
T Consensus 265 S~--~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi 341 (364)
T KOG0290|consen 265 SN--KVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQI 341 (364)
T ss_pred Cc--eEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhh-ccceeeee
Confidence 64 7999999999999999999999999999999888999999999999999997532 222233 34569999
Q ss_pred EEcCCCCCEEEEEeCCCcEEEEe
Q 046451 314 HWYPKIPGVISASSFDGKIGIYN 336 (719)
Q Consensus 314 ~~spdg~~~las~s~Dg~I~iwd 336 (719)
.|++..+.+|+.+. ++++.|..
T Consensus 342 ~Ws~~~~Dwiai~~-~kkleiLR 363 (364)
T KOG0290|consen 342 QWSSSQPDWIAICF-GKKLEILR 363 (364)
T ss_pred eecccCCCEEEEEe-cCeeeEEe
Confidence 99988778888887 56666654
No 123
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=7.1e-22 Score=208.60 Aligned_cols=284 Identities=16% Similarity=0.251 Sum_probs=225.6
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceE
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLV 87 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~l 87 (719)
..|.++|||.+.+.||++-.+|.| +||++..+-... . .-..+.+..|.+|+|++. ..|
T Consensus 26 s~I~slA~s~kS~~lAvsRt~g~I----------EiwN~~~~w~~~-~--vi~g~~drsIE~L~W~e~---------~RL 83 (691)
T KOG2048|consen 26 SEIVSLAYSHKSNQLAVSRTDGNI----------EIWNLSNNWFLE-P--VIHGPEDRSIESLAWAEG---------GRL 83 (691)
T ss_pred cceEEEEEeccCCceeeeccCCcE----------EEEccCCCceee-E--EEecCCCCceeeEEEccC---------CeE
Confidence 458899999999999999666655 899988643222 1 223367789999999955 589
Q ss_pred EEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccC
Q 046451 88 AGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRG 167 (719)
Q Consensus 88 asgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~ 167 (719)
++.+.+|.|.-||+ .+. +.+..+....+.|++++.++ .+..++.|+.||.++++++..++... +.
T Consensus 84 FS~g~sg~i~EwDl------~~l---k~~~~~d~~gg~IWsiai~p-~~~~l~IgcddGvl~~~s~~p~~I~~-----~r 148 (691)
T KOG2048|consen 84 FSSGLSGSITEWDL------HTL---KQKYNIDSNGGAIWSIAINP-ENTILAIGCDDGVLYDFSIGPDKITY-----KR 148 (691)
T ss_pred EeecCCceEEEEec------ccC---ceeEEecCCCcceeEEEeCC-ccceEEeecCCceEEEEecCCceEEE-----Ee
Confidence 99999999999999 555 77777888889999999999 77899999999988888877665432 22
Q ss_pred CCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-------CCCCceeEEEECCCCCcEEEEEeCCC
Q 046451 168 NGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-------SIKRRCSVLQWNPDVATQLVVASDED 240 (719)
Q Consensus 168 ~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-------~~~~~i~~l~~sp~g~~~l~~~s~d~ 240 (719)
.....++.|.+++|++++ ..|++|+.||.|++||..++..+..... ....-|.++.|-.++ .|++|...|
T Consensus 149 ~l~rq~sRvLslsw~~~~-~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~--tI~sgDS~G 225 (691)
T KOG2048|consen 149 SLMRQKSRVLSLSWNPTG-TKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS--TIASGDSAG 225 (691)
T ss_pred ecccccceEEEEEecCCc-cEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC--cEEEecCCc
Confidence 223346799999999997 5799999999999999999877662211 234457788888775 588888777
Q ss_pred CCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE----EEEecCCCCCeEEeEEc
Q 046451 241 SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI----VSELPAGTNWNFDIHWY 316 (719)
Q Consensus 241 ~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~----~~~l~~h~~~v~~l~~s 316 (719)
+|.+||...+ ..+..+..|...|.+++... +++++++++.|+.|..|...+++. ......|...|.+++..
T Consensus 226 ---~V~FWd~~~g-TLiqS~~~h~adVl~Lav~~-~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~ 300 (691)
T KOG2048|consen 226 ---TVTFWDSIFG-TLIQSHSCHDADVLALAVAD-NEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVI 300 (691)
T ss_pred ---eEEEEcccCc-chhhhhhhhhcceeEEEEcC-CCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeee
Confidence 9999999875 77888899999999999998 889999999999999998765532 22334688889999998
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCC
Q 046451 317 PKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 317 pdg~~~las~s~Dg~I~iwd~~~ 339 (719)
.+ .|++|+.|..+.+-....
T Consensus 301 ~~---~l~sgG~d~~l~i~~s~~ 320 (691)
T KOG2048|consen 301 EN---ALISGGRDFTLAICSSRE 320 (691)
T ss_pred cc---eEEecceeeEEEEccccc
Confidence 65 899999999988876655
No 124
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=1.8e-22 Score=195.10 Aligned_cols=324 Identities=17% Similarity=0.207 Sum_probs=223.0
Q ss_pred EEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec
Q 046451 41 LEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS 120 (719)
Q Consensus 41 i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~ 120 (719)
..-|+-+.......+.+....+|...|++++|+.|| ..|++++.|++|+||++++... .+- ++++.-
T Consensus 63 ~~~~k~~q~~f~Hpl~~~~LKgH~~~vt~~~FsSdG--------K~lat~~~Dr~Ir~w~~~DF~~-~eH---r~~R~n- 129 (420)
T KOG2096|consen 63 NDQWKAKQPTFVHPLNVSVLKGHKKEVTDVAFSSDG--------KKLATISGDRSIRLWDVRDFEN-KEH---RCIRQN- 129 (420)
T ss_pred hhhhcccCCCcccchhhhhhhccCCceeeeEEcCCC--------ceeEEEeCCceEEEEecchhhh-hhh---hHhhcc-
Confidence 345665555555555556667899999999999999 7999999999999999965332 111 222211
Q ss_pred cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC---CCccCCcc--CCCCCCCCCeEEEEecCCCCcEEEEEeCC
Q 046451 121 RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE---PSHFPPLR--GNGSAAQGEISFVSWNSKVQHILASTSYN 195 (719)
Q Consensus 121 ~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~---~~~~~~l~--~~~~~h~~~I~~l~~sp~g~~~l~s~s~d 195 (719)
..-+.-+.+.|.|+...+++++-...+|++|.+...+. ...+.... .....|.-.|..+-....+ .+|++++.|
T Consensus 130 ve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~-k~imsas~d 208 (420)
T KOG2096|consen 130 VEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNA-KYIMSASLD 208 (420)
T ss_pred ccCCCceEEEECCCcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCc-eEEEEecCC
Confidence 12235678999997677788888888999998754332 11111111 0112344556666666554 799999999
Q ss_pred CcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC-------CceEEeeCCCCCee
Q 046451 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM-------SPVKEFVGHTKGVI 268 (719)
Q Consensus 196 g~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~-------~~~~~~~~h~~~V~ 268 (719)
..|.+||++ |+.+..+. ......+..+.+|+|+ ++++++..- -|++|..--.+ ..+..+.||...|.
T Consensus 209 t~i~lw~lk-Gq~L~~id-tnq~~n~~aavSP~GR-Fia~~gFTp---DVkVwE~~f~kdG~fqev~rvf~LkGH~saV~ 282 (420)
T KOG2096|consen 209 TKICLWDLK-GQLLQSID-TNQSSNYDAAVSPDGR-FIAVSGFTP---DVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVL 282 (420)
T ss_pred CcEEEEecC-Cceeeeec-cccccccceeeCCCCc-EEEEecCCC---CceEEEEEeccCcchhhhhhhheeccchhhee
Confidence 999999999 88888887 6777788899999995 555555544 59999863211 23567899999999
Q ss_pred EEEeCCCCCCeEEEEeCCCcEEEEECCCC-------eEEEEe----cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeC
Q 046451 269 AMSWCPNDSSYLLTCAKDNRTICWDTVSG-------EIVSEL----PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337 (719)
Q Consensus 269 ~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~-------~~~~~l----~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~ 337 (719)
.++|++ +...+++.+.||+++|||++-. +.+.+. ......-..+..+|+| ..||.+. ...|++|..
T Consensus 283 ~~aFsn-~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g-~~lA~s~-gs~l~~~~s 359 (420)
T KOG2096|consen 283 AAAFSN-SSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSG-DSLAVSF-GSDLKVFAS 359 (420)
T ss_pred eeeeCC-CcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCC-cEEEeec-CCceEEEEc
Confidence 999999 9999999999999999998621 222222 1222334589999999 6666654 678999999
Q ss_pred CCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEE-EccCCCCCccccccccccce
Q 046451 338 EGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVS-FHPKSSAGHTSENSQHAPVH 397 (719)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~-~~~~~~~~~~~~~~~~~~v~ 397 (719)
++++.+...+.--. .....++|+.+||+++ ++..--.+.+...||++.|+
T Consensus 360 e~g~~~~~~e~~h~----------~~Is~is~~~~g~~~atcGdr~vrv~~ntpg~~~~V~ 410 (420)
T KOG2096|consen 360 EDGKDYPELEDIHS----------TTISSISYSSDGKYIATCGDRYVRVIRNTPGWHSRVV 410 (420)
T ss_pred ccCccchhHHHhhc----------CceeeEEecCCCcEEeeecceeeeeecCCCchhhHHH
Confidence 99877653332211 2235688999998764 44333334455566666654
No 125
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=2.2e-22 Score=203.59 Aligned_cols=289 Identities=16% Similarity=0.262 Sum_probs=230.0
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
...|++|.|+|...+|.+++.||.+ +||.++...... + ....-....|.+.+|.++|. ..
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~l----------rifqvDGk~N~~-l--qS~~l~~fPi~~a~f~p~G~-------~~ 272 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTL----------RIFQVDGKVNPK-L--QSIHLEKFPIQKAEFAPNGH-------SV 272 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcE----------EEEEecCccChh-h--eeeeeccCccceeeecCCCc-------eE
Confidence 4679999999999999999998877 788888544331 1 22223567899999999984 58
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeecccc-CCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHK-GPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+++++....++.||+++.. . ..+..+.++. ..+.....++ ++++|+..+..|.|.+....+++.+..+
T Consensus 273 i~~s~rrky~ysyDle~ak----~---~k~~~~~g~e~~~~e~FeVSh-d~~fia~~G~~G~I~lLhakT~eli~s~--- 341 (514)
T KOG2055|consen 273 IFTSGRRKYLYSYDLETAK----V---TKLKPPYGVEEKSMERFEVSH-DSNFIAIAGNNGHIHLLHAKTKELITSF--- 341 (514)
T ss_pred EEecccceEEEEeeccccc----c---ccccCCCCcccchhheeEecC-CCCeEEEcccCceEEeehhhhhhhhhee---
Confidence 9999999999999995422 1 3444445544 3566777888 7899999999999999999888876553
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
+ ..+.|..++|+.++ ..|++++.+|.|++||++...++.++.+...-.-++++.+.++. +|++|++.| .|
T Consensus 342 K-----ieG~v~~~~fsSds-k~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~-ylA~GS~~G---iV 411 (514)
T KOG2055|consen 342 K-----IEGVVSDFTFSSDS-KELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGS-YLATGSDSG---IV 411 (514)
T ss_pred e-----eccEEeeEEEecCC-cEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCc-eEEeccCcc---eE
Confidence 2 35589999999997 57777888899999999999999999854444556788889985 899999988 99
Q ss_pred EEEecCCC-----CCceEEeeCCCCCeeEEEeCCCCCCeEEEEe--CCCcEEEEECCCCeEEEEecCC---CCCeEEeEE
Q 046451 246 RLWDMRNT-----MSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA--KDNRTICWDTVSGEIVSELPAG---TNWNFDIHW 315 (719)
Q Consensus 246 ~lwDl~~~-----~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs--~Dg~I~iwd~~~~~~~~~l~~h---~~~v~~l~~ 315 (719)
.|||..+. .+++..+..-...|+++.|++ |..+|+.++ .++.+++-.+-+......+... -+.|+|++|
T Consensus 412 NIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~-d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aF 490 (514)
T KOG2055|consen 412 NIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNH-DAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAF 490 (514)
T ss_pred EEeccchhhccCCCCchhhhhhhheeeeeeeeCc-chhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEe
Confidence 99996532 356777777778999999999 999999887 4678999988877766666543 246899999
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCC
Q 046451 316 YPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 316 spdg~~~las~s~Dg~I~iwd~~ 338 (719)
+|.+ .++|.|.++|++.+|.+.
T Consensus 491 SP~s-G~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 491 SPNS-GYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred cCCC-ceEEeecCCCceeeEeec
Confidence 9998 799999999999999874
No 126
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.90 E-value=2.9e-22 Score=202.64 Aligned_cols=299 Identities=21% Similarity=0.312 Sum_probs=223.5
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasg 142 (719)
+.++|++++|+|... ..++++|...|.|-+||+.... .+. ..+..+..|...|.+|.|+|.+...+++.
T Consensus 185 ~~~Rit~l~fHPt~~------~~lva~GdK~G~VG~Wn~~~~~--~d~---d~v~~f~~hs~~Vs~l~F~P~n~s~i~ss 253 (498)
T KOG4328|consen 185 TDRRITSLAFHPTEN------RKLVAVGDKGGQVGLWNFGTQE--KDK---DGVYLFTPHSGPVSGLKFSPANTSQIYSS 253 (498)
T ss_pred cccceEEEEecccCc------ceEEEEccCCCcEEEEecCCCC--Ccc---CceEEeccCCccccceEecCCChhheeee
Confidence 678999999999862 3689999999999999995221 122 55777888999999999999989999999
Q ss_pred eCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeE
Q 046451 143 ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSV 222 (719)
Q Consensus 143 s~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~ 222 (719)
+.||+|+.-|+++......+. +. .....+..+.|+.+.. .++.+..=|.+.+||+++++........|...|.+
T Consensus 254 SyDGtiR~~D~~~~i~e~v~s-~~----~d~~~fs~~d~~~e~~-~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~s 327 (498)
T KOG4328|consen 254 SYDGTIRLQDFEGNISEEVLS-LD----TDNIWFSSLDFSAESR-SVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITS 327 (498)
T ss_pred ccCceeeeeeecchhhHHHhh-cC----ccceeeeeccccCCCc-cEEEeecccceEEEEeecCCccchhhhhhhcccce
Confidence 999999999998765332211 11 1334677888888865 55556666699999999877633333367889999
Q ss_pred EEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC---ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC----
Q 046451 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMS---PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV---- 295 (719)
Q Consensus 223 l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~---~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~---- 295 (719)
++++|-..++|++++.|+ +++|||+|.... ++.....|...|.+..|||.++. |+|.+.|+.|+|||..
T Consensus 328 v~~NP~~p~~laT~s~D~---T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gt-l~TT~~D~~IRv~dss~~sa 403 (498)
T KOG4328|consen 328 VALNPVCPWFLATASLDQ---TAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGT-LLTTCQDNEIRVFDSSCISA 403 (498)
T ss_pred eecCCCCchheeecccCc---ceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCc-eEeeccCCceEEeecccccc
Confidence 999999999999999998 999999986432 33455679999999999995555 9999999999999983
Q ss_pred CCeEEEEecC---CCCC--eEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCC--cee
Q 046451 296 SGEIVSELPA---GTNW--NFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPA--GAS 368 (719)
Q Consensus 296 ~~~~~~~l~~---h~~~--v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~--~~s 368 (719)
..+.+.++.. +..| .+...|.|+. .+|++|..-..|-|+|-++++.+............-.-+|.+... .+.
T Consensus 404 ~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~-~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG 482 (498)
T KOG4328|consen 404 KDEPLGTIPHNNRTGRWLTPFKAAWDPDY-NLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAG 482 (498)
T ss_pred cCCccceeeccCcccccccchhheeCCCc-cEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceecc
Confidence 3333444321 1122 4567999987 899999999999999999999766544443332223334555433 344
Q ss_pred eeeCCcEEEEccCCC
Q 046451 369 FGFGGKLVSFHPKSS 383 (719)
Q Consensus 369 ~s~~Gklv~~~~~~~ 383 (719)
.+..|++.+|..+++
T Consensus 483 ~~s~Gki~vft~k~~ 497 (498)
T KOG4328|consen 483 GNSSGKIYVFTNKKS 497 (498)
T ss_pred CCccceEEEEecCCC
Confidence 566788998887654
No 127
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.90 E-value=2.4e-22 Score=211.83 Aligned_cols=252 Identities=21% Similarity=0.259 Sum_probs=203.6
Q ss_pred CCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC--CCCEE
Q 046451 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF--TPNLL 139 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~--~~~~l 139 (719)
+....|.+|+.+|++ +.||+|..-|+++||++ .+. +....+..|...|.|+.|+.. ..++|
T Consensus 457 d~r~G~R~~~vSp~g--------qhLAsGDr~GnlrVy~L------q~l---~~~~~~eAHesEilcLeyS~p~~~~kLL 519 (1080)
T KOG1408|consen 457 DSRFGFRALAVSPDG--------QHLASGDRGGNLRVYDL------QEL---EYTCFMEAHESEILCLEYSFPVLTNKLL 519 (1080)
T ss_pred CcccceEEEEECCCc--------ceecccCccCceEEEEe------hhh---hhhhheecccceeEEEeecCchhhhHhh
Confidence 446679999999999 89999999999999999 344 667788899999999999852 34689
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCC-CcEEEEEeCCCcEEEEECCCCceeEEecC----
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKV-QHILASTSYNGTTVVWDLKKQKPVISFSE---- 214 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g-~~~l~s~s~dg~I~iwd~~~~~~~~~~~~---- 214 (719)
++++.|..|+|||+..... +.....+|...|+++.|.-.| ....++++.|..|.+--.+.......|..
T Consensus 520 ASasrdRlIHV~Dv~rny~------l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t 593 (1080)
T KOG1408|consen 520 ASASRDRLIHVYDVKRNYD------LVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQT 593 (1080)
T ss_pred hhccCCceEEEEecccccc------hhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccc
Confidence 9999999999999976544 333455688999999997765 34678888888765433332111111211
Q ss_pred CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC---CCCCeeEEEeCCCCCCeEEEEeCCCcEEE
Q 046451 215 SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG---HTKGVIAMSWCPNDSSYLLTCAKDNRTIC 291 (719)
Q Consensus 215 ~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~---h~~~V~~v~~sp~d~~~l~sgs~Dg~I~i 291 (719)
.....++.++..|.. .++++++.|. .|+|||+.++ +..+.|++ |.+....+...| .+.||++...|.++.+
T Consensus 594 ~~ktTlYDm~Vdp~~-k~v~t~cQDr---nirif~i~sg-Kq~k~FKgs~~~eG~lIKv~lDP-SgiY~atScsdktl~~ 667 (1080)
T KOG1408|consen 594 LSKTTLYDMAVDPTS-KLVVTVCQDR---NIRIFDIESG-KQVKSFKGSRDHEGDLIKVILDP-SGIYLATSCSDKTLCF 667 (1080)
T ss_pred cccceEEEeeeCCCc-ceEEEEeccc---ceEEEecccc-ceeeeecccccCCCceEEEEECC-CccEEEEeecCCceEE
Confidence 235678899999997 4778888887 7999999886 55667754 667888999999 9999999999999999
Q ss_pred EECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 292 WDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 292 wd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
+|+.+|+++....+|...|+.+.|.+|- +.|++.+.||.|.||.+.....+
T Consensus 668 ~Df~sgEcvA~m~GHsE~VTG~kF~nDC-kHlISvsgDgCIFvW~lp~~mii 718 (1080)
T KOG1408|consen 668 VDFVSGECVAQMTGHSEAVTGVKFLNDC-KHLISVSGDGCIFVWKLPLTMII 718 (1080)
T ss_pred EEeccchhhhhhcCcchheeeeeecccc-hhheeecCCceEEEEECchhHhH
Confidence 9999999999999999999999999999 68888888999999999875443
No 128
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.90 E-value=1.3e-21 Score=189.17 Aligned_cols=285 Identities=16% Similarity=0.289 Sum_probs=216.1
Q ss_pred cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 10 SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 10 V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
..|+.||+.|.+||+|..||.| .|||+.+....+.+ ..|...|++++||++| +.|++
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~v----------vI~D~~T~~iar~l-----saH~~pi~sl~WS~dg--------r~Llt 82 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRV----------VIYDFDTFRIARML-----SAHVRPITSLCWSRDG--------RKLLT 82 (405)
T ss_pred cceEEeccCcceeeeeccCCcE----------EEEEccccchhhhh-----hccccceeEEEecCCC--------CEeee
Confidence 7899999999999999999887 78999876644433 5689999999999999 89999
Q ss_pred EcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCC
Q 046451 90 GLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNG 169 (719)
Q Consensus 90 gs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~ 169 (719)
++.|..|.+||+ ..+ .+++.+. ....|+.+.|+|.+.+.+++.-.+..-.+.++..... .+ |....
T Consensus 83 sS~D~si~lwDl------~~g---s~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h--~~--Lp~d~ 148 (405)
T KOG1273|consen 83 SSRDWSIKLWDL------LKG---SPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKH--SV--LPKDD 148 (405)
T ss_pred ecCCceeEEEec------cCC---CceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCce--ee--ccCCC
Confidence 999999999999 556 5666665 5789999999997777777776666666666665322 11 11111
Q ss_pred C-CCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEE
Q 046451 170 S-AAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLW 248 (719)
Q Consensus 170 ~-~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lw 248 (719)
. .....-.+..|++.| +++++|...|.+.++|..+.+++..+.......|..|.|+..|+ .|+.-+.|. .|+.|
T Consensus 149 d~dln~sas~~~fdr~g-~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~-~liiNtsDR---vIR~y 223 (405)
T KOG1273|consen 149 DGDLNSSASHGVFDRRG-KYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGR-FLIINTSDR---VIRTY 223 (405)
T ss_pred ccccccccccccccCCC-CEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCc-EEEEecCCc---eEEEE
Confidence 1 111122344678887 69999999999999999999999988854558899999999985 677777777 89999
Q ss_pred ecCCCCCc--------eEEeeC--CCCCeeEEEeCCCCCCeEEEEe-CCCcEEEEECCCCeEEEEecCCC-CCeEEeEEc
Q 046451 249 DMRNTMSP--------VKEFVG--HTKGVIAMSWCPNDSSYLLTCA-KDNRTICWDTVSGEIVSELPAGT-NWNFDIHWY 316 (719)
Q Consensus 249 Dl~~~~~~--------~~~~~~--h~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~~~~~~~~l~~h~-~~v~~l~~s 316 (719)
+++.-..+ ...+.. ....-.+++|+. +|.|++.++ .-..++||....|.++..+.+.. ....++.|+
T Consensus 224 e~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~-dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~wh 302 (405)
T KOG1273|consen 224 EISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSG-DGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWH 302 (405)
T ss_pred ehhhhcccCccCCcChhHHHHHHHhhhhhhheeecC-CccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccc
Confidence 98632111 111110 112335788998 888888776 34679999999999999998877 567889999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCC
Q 046451 317 PKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 317 pdg~~~las~s~Dg~I~iwd~~~ 339 (719)
+-. .+|++- ..|.++||....
T Consensus 303 p~r-p~i~si-~sg~v~iw~~~~ 323 (405)
T KOG1273|consen 303 PVR-PIIASI-ASGVVYIWAVVQ 323 (405)
T ss_pred cce-eeeeec-cCCceEEEEeec
Confidence 997 466666 689999998765
No 129
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.90 E-value=5.8e-22 Score=192.17 Aligned_cols=296 Identities=19% Similarity=0.264 Sum_probs=217.0
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcc--------cceeecccCCCCCceeeeecCCCCCC
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDR--------DLLLVGESPSSERFNRLAWGKNGSGS 79 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~--------~~~~~~~~~~~~~V~~l~~sp~g~~~ 79 (719)
+-...+.|||||..|.+-+.|..+ .+|++-...-.. .+...-.......|.+.+|-+.- ..
T Consensus 50 nf~kgckWSPDGSciL~~sedn~l----------~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M-~s 118 (406)
T KOG2919|consen 50 NFLKGCKWSPDGSCILSLSEDNCL----------NCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRM-KS 118 (406)
T ss_pred hhhccceeCCCCceEEeecccCee----------eEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeecc-cc
Confidence 345578999999999998766554 778765322111 11111122345677788886321 11
Q ss_pred CCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec--cccC---CEEEEEEeCCCCCEEEEEeCCCcEEEEcCC
Q 046451 80 EDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS--RHKG---PVRGLEFNSFTPNLLASGADDGEICIWDLS 154 (719)
Q Consensus 80 ~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~--~h~~---~V~~l~fsp~~~~~lasgs~dg~I~iwdl~ 154 (719)
......++++.+.+.-|++||.. ++ +....+. .|.+ ...+|+|++ |+.+|++|. +..|+|||+.
T Consensus 119 ~qP~t~l~a~ssr~~PIh~wdaf------tG---~lraSy~~ydh~de~taAhsL~Fs~-DGeqlfaGy-krcirvFdt~ 187 (406)
T KOG2919|consen 119 DQPSTNLFAVSSRDQPIHLWDAF------TG---KLRASYRAYDHQDEYTAAHSLQFSP-DGEQLFAGY-KRCIRVFDTS 187 (406)
T ss_pred CCCccceeeeccccCceeeeecc------cc---ccccchhhhhhHHhhhhheeEEecC-CCCeEeecc-cceEEEeecc
Confidence 11233799999999999999984 44 3333333 2443 446899999 788887665 5789999994
Q ss_pred -CCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEE
Q 046451 155 -APAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQL 233 (719)
Q Consensus 155 -~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l 233 (719)
.+..-..+..+.....+..+.|.+++|+|.....+++++...++-||.-..+.++..+. +|.+.|+.+.|.++|++++
T Consensus 188 RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llg-gh~gGvThL~~~edGn~lf 266 (406)
T KOG2919|consen 188 RPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLG-GHGGGVTHLQWCEDGNKLF 266 (406)
T ss_pred CCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeec-ccCCCeeeEEeccCcCeec
Confidence 44433333323333344577899999999988899999999999999988888888887 8999999999999997555
Q ss_pred EEEeCCCCCCcEEEEecCCCCCceEEeeCCCC-CeeEEEe--CCCCCCeEEEEeCCCcEEEEECCC-CeEEEEecCCCCC
Q 046451 234 VVASDEDSSPALRLWDMRNTMSPVKEFVGHTK-GVIAMSW--CPNDSSYLLTCAKDNRTICWDTVS-GEIVSELPAGTNW 309 (719)
Q Consensus 234 ~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~-~V~~v~~--sp~d~~~l~sgs~Dg~I~iwd~~~-~~~~~~l~~h~~~ 309 (719)
.-+..+. .|..||+|....++..+..|.+ .-..|-| .+ ++++|++|+.||.|++||+++ |+.+..+..+...
T Consensus 267 sGaRk~d---kIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~-~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~ 342 (406)
T KOG2919|consen 267 SGARKDD---KILCWDIRYSRDPVYALERHVGDTNQRILFDLDP-KGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDT 342 (406)
T ss_pred ccccCCC---eEEEEeehhccchhhhhhhhccCccceEEEecCC-CCceeeccCCCccEEEEecCCCCCccccccccccc
Confidence 4444455 8999999998888888888866 3334444 57 789999999999999999998 7878888889999
Q ss_pred eEEeEEcCCCCCEEEEEeCCCc
Q 046451 310 NFDIHWYPKIPGVISASSFDGK 331 (719)
Q Consensus 310 v~~l~~spdg~~~las~s~Dg~ 331 (719)
++.++++|-- -++++++....
T Consensus 343 vNgvslnP~m-pilatssGqr~ 363 (406)
T KOG2919|consen 343 VNGVSLNPIM-PILATSSGQRI 363 (406)
T ss_pred ccceecCccc-ceeeeccCcee
Confidence 9999999997 58888885533
No 130
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.90 E-value=1e-21 Score=213.74 Aligned_cols=278 Identities=17% Similarity=0.317 Sum_probs=211.6
Q ss_pred cccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccC-CCCCceeeeecCCCCCCCC
Q 046451 3 CIKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESP-SSERFNRLAWGKNGSGSED 81 (719)
Q Consensus 3 ~l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-~~~~V~~l~~sp~g~~~~~ 81 (719)
|..|.+.-+.|+|.++|++|.+++.||.| ++|+........+. +. +...|.+++-..
T Consensus 9 Ryaht~G~t~i~~d~~gefi~tcgsdg~i----------r~~~~~sd~e~P~t-----i~~~g~~v~~ia~~s------- 66 (933)
T KOG1274|consen 9 RYAHTGGLTLICYDPDGEFICTCGSDGDI----------RKWKTNSDEEEPET-----IDISGELVSSIACYS------- 66 (933)
T ss_pred hhhccCceEEEEEcCCCCEEEEecCCCce----------EEeecCCcccCCch-----hhccCceeEEEeecc-------
Confidence 34677888999999999999999988877 78887766333322 12 566677766543
Q ss_pred CccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCc
Q 046451 82 FSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSH 161 (719)
Q Consensus 82 ~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~ 161 (719)
.+|++|+.+++|.+|.+. ++ ..-..+...+-.+++++|+- +++++|.|+.|-.|++.++.+......
T Consensus 67 ---~~f~~~s~~~tv~~y~fp------s~---~~~~iL~Rftlp~r~~~v~g-~g~~iaagsdD~~vK~~~~~D~s~~~~ 133 (933)
T KOG1274|consen 67 ---NHFLTGSEQNTVLRYKFP------SG---EEDTILARFTLPIRDLAVSG-SGKMIAAGSDDTAVKLLNLDDSSQEKV 133 (933)
T ss_pred ---cceEEeeccceEEEeeCC------CC---CccceeeeeeccceEEEEec-CCcEEEeecCceeEEEEeccccchhee
Confidence 589999999999999994 33 22333444567899999998 899999999999999999988776554
Q ss_pred cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-------CCCCceeEEEECCCCCcEEE
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-------SIKRRCSVLQWNPDVATQLV 234 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-------~~~~~i~~l~~sp~g~~~l~ 234 (719)
+ .+|++.|.+|.|+|++ .+||+.+.||.|++||+.++.+..++.. .....+..++|+|+|..+++
T Consensus 134 ---l----rgh~apVl~l~~~p~~-~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~ 205 (933)
T KOG1274|consen 134 ---L----RGHDAPVLQLSYDPKG-NFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAV 205 (933)
T ss_pred ---e----cccCCceeeeeEcCCC-CEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEe
Confidence 2 4588999999999997 6999999999999999999887666543 12456778999999876666
Q ss_pred EEeCCCCCCcEEEEecCCCCCceEEee--CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEE
Q 046451 235 VASDEDSSPALRLWDMRNTMSPVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFD 312 (719)
Q Consensus 235 ~~s~d~~~~~I~lwDl~~~~~~~~~~~--~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~ 312 (719)
.+.++ .|++|+..+. +....+. .+...+.++.|+| +|.|||+++.||.|.|||.++.+. ......|.+
T Consensus 206 ~~~d~----~Vkvy~r~~w-e~~f~Lr~~~~ss~~~~~~wsP-nG~YiAAs~~~g~I~vWnv~t~~~----~~~~~~Vc~ 275 (933)
T KOG1274|consen 206 PPVDN----TVKVYSRKGW-ELQFKLRDKLSSSKFSDLQWSP-NGKYIAASTLDGQILVWNVDTHER----HEFKRAVCC 275 (933)
T ss_pred eccCC----eEEEEccCCc-eeheeecccccccceEEEEEcC-CCcEEeeeccCCcEEEEecccchh----ccccceeEE
Confidence 66655 7999998664 4444443 2445599999999 899999999999999999987322 233457999
Q ss_pred eEEcCCCCCEEEEEeCCCcEEE
Q 046451 313 IHWYPKIPGVISASSFDGKIGI 334 (719)
Q Consensus 313 l~~spdg~~~las~s~Dg~I~i 334 (719)
++|.++. ..|..-...|...+
T Consensus 276 ~aw~p~~-n~it~~~~~g~~~~ 296 (933)
T KOG1274|consen 276 EAWKPNA-NAITLITALGTLGV 296 (933)
T ss_pred EecCCCC-CeeEEEeecccccc
Confidence 9999998 44433333444333
No 131
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=1.5e-22 Score=204.10 Aligned_cols=245 Identities=23% Similarity=0.400 Sum_probs=195.8
Q ss_pred CCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeec----------------ccCCCCCceeeeecCCCCCCCCC
Q 046451 19 APYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVG----------------ESPSSERFNRLAWGKNGSGSEDF 82 (719)
Q Consensus 19 g~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~----------------~~~~~~~V~~l~~sp~g~~~~~~ 82 (719)
|+|+|+|+.+-.| +|||++..........++ ..+|.+.|.+|+|+.+-.
T Consensus 192 gNyvAiGtmdp~I----------eIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~----- 256 (463)
T KOG0270|consen 192 GNYVAIGTMDPEI----------EIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFR----- 256 (463)
T ss_pred cceEEEeccCcee----------EEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccc-----
Confidence 5799999887765 889987543322111111 235888899999998864
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCcc
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF 162 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~ 162 (719)
++||+|+.|.+|++||+ .++ ++..++..|.+.|.++.|++....+|++|+.|++|.+.|++........
T Consensus 257 --nVLaSgsaD~TV~lWD~------~~g---~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~ 325 (463)
T KOG0270|consen 257 --NVLASGSADKTVKLWDV------DTG---KPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKE 325 (463)
T ss_pred --eeEEecCCCceEEEEEc------CCC---CcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCce
Confidence 89999999999999999 677 8888899999999999999988999999999999999999964332221
Q ss_pred CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC-ceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCC
Q 046451 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ-KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241 (719)
Q Consensus 163 ~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~ 241 (719)
+ ...+.|..++|++...+.++++..||+|+-+|+|+. +++.++. .|...|.+|+++..-..++++++.++
T Consensus 326 --w-----k~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~-AHd~~ISgl~~n~~~p~~l~t~s~d~- 396 (463)
T KOG0270|consen 326 --W-----KFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLK-AHDDEISGLSVNIQTPGLLSTASTDK- 396 (463)
T ss_pred --E-----EeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEE-eccCCcceEEecCCCCcceeeccccc-
Confidence 1 135589999999998889999999999999999985 8889988 89999999999999989999999998
Q ss_pred CCcEEEEecCCCCC-ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEE
Q 046451 242 SPALRLWDMRNTMS-PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV 300 (719)
Q Consensus 242 ~~~I~lwDl~~~~~-~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~ 300 (719)
.|++|++..... .+..-.-.-+...|++++++...+|+.|+..+.++|||+.+...+
T Consensus 397 --~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V 454 (463)
T KOG0270|consen 397 --VVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPV 454 (463)
T ss_pred --eEEEEeecCCCCcccccccccccceeecccCCCcceEEEecCccceEEEeecccChhH
Confidence 999999975422 111111112346677888866678889999999999999876544
No 132
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.90 E-value=1.6e-21 Score=188.60 Aligned_cols=291 Identities=13% Similarity=0.190 Sum_probs=207.5
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
|.+.|++++||.||++||+++.|+.| +||+++.-.......+..... -+--+.+.|.+|.. .
T Consensus 85 H~~~vt~~~FsSdGK~lat~~~Dr~I----------r~w~~~DF~~~eHr~~R~nve-~dhpT~V~FapDc~-------s 146 (420)
T KOG2096|consen 85 HKKEVTDVAFSSDGKKLATISGDRSI----------RLWDVRDFENKEHRCIRQNVE-YDHPTRVVFAPDCK-------S 146 (420)
T ss_pred cCCceeeeEEcCCCceeEEEeCCceE----------EEEecchhhhhhhhHhhcccc-CCCceEEEECCCcc-------e
Confidence 56789999999999999999888776 788876322111111111122 23567899999974 5
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCc------eeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCC
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPL------IAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEP 159 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~------~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~ 159 (719)
+++..-...++++|.+.+..+ +...-. ...-+.|.-.|..+-... ++.+|++++.|..|.+|++. ++.+
T Consensus 147 ~vv~~~~g~~l~vyk~~K~~d---G~~~~~~v~~D~~~f~~kh~v~~i~iGiA~-~~k~imsas~dt~i~lw~lk-Gq~L 221 (420)
T KOG2096|consen 147 VVVSVKRGNKLCVYKLVKKTD---GSGSHHFVHIDNLEFERKHQVDIINIGIAG-NAKYIMSASLDTKICLWDLK-GQLL 221 (420)
T ss_pred EEEEEccCCEEEEEEeeeccc---CCCCcccccccccccchhcccceEEEeecC-CceEEEEecCCCcEEEEecC-Ccee
Confidence 777777778899998754321 211000 111234666676766655 78899999999999999998 5554
Q ss_pred CccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC---C-----ceeEEecCCCCCceeEEEECCCCCc
Q 046451 160 SHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK---Q-----KPVISFSESIKRRCSVLQWNPDVAT 231 (719)
Q Consensus 160 ~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~---~-----~~~~~~~~~~~~~i~~l~~sp~g~~ 231 (719)
..+. .....-+..+.+|+| +++++++..-.|++|.+-- | ..+..+. +|...|..++|+++. .
T Consensus 222 ~~id-------tnq~~n~~aavSP~G-RFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~Lk-GH~saV~~~aFsn~S-~ 291 (420)
T KOG2096|consen 222 QSID-------TNQSSNYDAAVSPDG-RFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLK-GHQSAVLAAAFSNSS-T 291 (420)
T ss_pred eeec-------cccccccceeeCCCC-cEEEEecCCCCceEEEEEeccCcchhhhhhhheec-cchhheeeeeeCCCc-c
Confidence 4431 123345677899998 5899999888999998632 2 2345566 899999999999997 6
Q ss_pred EEEEEeCCCCCCcEEEEecCCCC------CceEEe----eCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEE
Q 046451 232 QLVVASDEDSSPALRLWDMRNTM------SPVKEF----VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301 (719)
Q Consensus 232 ~l~~~s~d~~~~~I~lwDl~~~~------~~~~~~----~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~ 301 (719)
.+++.+.|| +++|||..-.. +.+++. ....+.-..+.++| .++.|+.+ ....|++|..++|+..-
T Consensus 292 r~vtvSkDG---~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP-~g~~lA~s-~gs~l~~~~se~g~~~~ 366 (420)
T KOG2096|consen 292 RAVTVSKDG---KWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSP-SGDSLAVS-FGSDLKVFASEDGKDYP 366 (420)
T ss_pred eeEEEecCC---cEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCC-CCcEEEee-cCCceEEEEcccCccch
Confidence 899999998 99999985211 122222 12223445899999 88877655 45679999999998877
Q ss_pred Eec-CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEe
Q 046451 302 ELP-AGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336 (719)
Q Consensus 302 ~l~-~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd 336 (719)
+++ .|...|.+|+|+++| +++++++ |..++++.
T Consensus 367 ~~e~~h~~~Is~is~~~~g-~~~atcG-dr~vrv~~ 400 (420)
T KOG2096|consen 367 ELEDIHSTTISSISYSSDG-KYIATCG-DRYVRVIR 400 (420)
T ss_pred hHHHhhcCceeeEEecCCC-cEEeeec-ceeeeeec
Confidence 775 588899999999999 8999998 78888876
No 133
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.90 E-value=4e-21 Score=201.00 Aligned_cols=273 Identities=12% Similarity=0.129 Sum_probs=189.5
Q ss_pred CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEE
Q 046451 20 PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIW 99 (719)
Q Consensus 20 ~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lw 99 (719)
+++++++.||.| ++||+..+..... ......+.+++|++++. .++++++.++.|++|
T Consensus 2 ~~~~s~~~d~~v----------~~~d~~t~~~~~~------~~~~~~~~~l~~~~dg~-------~l~~~~~~~~~v~~~ 58 (300)
T TIGR03866 2 KAYVSNEKDNTI----------SVIDTATLEVTRT------FPVGQRPRGITLSKDGK-------LLYVCASDSDTIQVI 58 (300)
T ss_pred cEEEEecCCCEE----------EEEECCCCceEEE------EECCCCCCceEECCCCC-------EEEEEECCCCeEEEE
Confidence 567777666655 8899875543222 22234577899999973 344677889999999
Q ss_pred cCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE-EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEE
Q 046451 100 NPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA-SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178 (719)
Q Consensus 100 d~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la-sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~ 178 (719)
|+ .++ +.+..+..+. .+..++|++ +++.|+ +++.|+.|++||+.+.+.+..+ . +...+.+
T Consensus 59 d~------~~~---~~~~~~~~~~-~~~~~~~~~-~g~~l~~~~~~~~~l~~~d~~~~~~~~~~---~-----~~~~~~~ 119 (300)
T TIGR03866 59 DL------ATG---EVIGTLPSGP-DPELFALHP-NGKILYIANEDDNLVTVIDIETRKVLAEI---P-----VGVEPEG 119 (300)
T ss_pred EC------CCC---cEEEeccCCC-CccEEEECC-CCCEEEEEcCCCCeEEEEECCCCeEEeEe---e-----CCCCcce
Confidence 98 334 4444454443 356789999 566554 5567899999999876544332 1 1224678
Q ss_pred EEecCCCCcEEEEEeCCC-cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCce
Q 046451 179 VSWNSKVQHILASTSYNG-TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPV 257 (719)
Q Consensus 179 l~~sp~g~~~l~s~s~dg-~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~ 257 (719)
++|++++. +++++..++ .+.+||.++++.+..+. .......++|++++..+++++..++ .|++||+++. +.+
T Consensus 120 ~~~~~dg~-~l~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~---~v~i~d~~~~-~~~ 192 (300)
T TIGR03866 120 MAVSPDGK-IVVNTSETTNMAHFIDTKTYEIVDNVL--VDQRPRFAEFTADGKELWVSSEIGG---TVSVIDVATR-KVI 192 (300)
T ss_pred EEECCCCC-EEEEEecCCCeEEEEeCCCCeEEEEEE--cCCCccEEEECCCCCEEEEEcCCCC---EEEEEEcCcc-eee
Confidence 99999974 777776654 57788998887766554 3345678999999865555555565 8999999875 444
Q ss_pred EEeeCCC-----C--CeeEEEeCCCCCCeEEE-EeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEE-EeC
Q 046451 258 KEFVGHT-----K--GVIAMSWCPNDSSYLLT-CAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISA-SSF 328 (719)
Q Consensus 258 ~~~~~h~-----~--~V~~v~~sp~d~~~l~s-gs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las-~s~ 328 (719)
..+..+. . ....++|++ +++++++ .+.++.|.+||.++++.+..+. +...+.+++|+++|. +|++ ++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~i~~s~-dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~-~l~~~~~~ 269 (300)
T TIGR03866 193 KKITFEIPGVHPEAVQPVGIKLTK-DGKTAFVALGPANRVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEK-YLLTTNGV 269 (300)
T ss_pred eeeeecccccccccCCccceEECC-CCCEEEEEcCCCCeEEEEECCCCcEEEEEE-eCCCcceEEECCCCC-EEEEEcCC
Confidence 4443221 1 234688999 7776544 4567789999999988876654 334689999999994 5555 467
Q ss_pred CCcEEEEeCCCCcccc
Q 046451 329 DGKIGIYNIEGCSRYG 344 (719)
Q Consensus 329 Dg~I~iwd~~~~~~~~ 344 (719)
++.|+|||+++++.+.
T Consensus 270 ~~~i~v~d~~~~~~~~ 285 (300)
T TIGR03866 270 SNDVSVIDVAALKVIK 285 (300)
T ss_pred CCeEEEEECCCCcEEE
Confidence 9999999999988755
No 134
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.90 E-value=2.5e-22 Score=204.39 Aligned_cols=280 Identities=15% Similarity=0.253 Sum_probs=220.2
Q ss_pred ecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc--ccCCEEEEEEeCCC
Q 046451 58 VGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR--HKGPVRGLEFNSFT 135 (719)
Q Consensus 58 ~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~--h~~~V~~l~fsp~~ 135 (719)
+....|.+-|..+.+|... +.+++|+ .|.|+|||+... .....+..+.. ....|+++.+.+ |
T Consensus 413 ~~tL~HGEvVcAvtIS~~t--------rhVyTgG-kgcVKVWdis~p------g~k~PvsqLdcl~rdnyiRSckL~p-d 476 (705)
T KOG0639|consen 413 INTLAHGEVVCAVTISNPT--------RHVYTGG-KGCVKVWDISQP------GNKSPVSQLDCLNRDNYIRSCKLLP-D 476 (705)
T ss_pred hhhhccCcEEEEEEecCCc--------ceeEecC-CCeEEEeeccCC------CCCCccccccccCcccceeeeEecC-C
Confidence 3445688889999998876 6888886 578999999532 22234444433 456899999999 8
Q ss_pred CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCC
Q 046451 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSES 215 (719)
Q Consensus 136 ~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~ 215 (719)
++.|++|+.-.+|.|||+...... ++.......-.+..++.++|. +++++|+.||.|.|||+.+...++.|. +
T Consensus 477 grtLivGGeastlsiWDLAapTpr-----ikaeltssapaCyALa~spDa-kvcFsccsdGnI~vwDLhnq~~Vrqfq-G 549 (705)
T KOG0639|consen 477 GRTLIVGGEASTLSIWDLAAPTPR-----IKAELTSSAPACYALAISPDA-KVCFSCCSDGNIAVWDLHNQTLVRQFQ-G 549 (705)
T ss_pred CceEEeccccceeeeeeccCCCcc-----hhhhcCCcchhhhhhhcCCcc-ceeeeeccCCcEEEEEcccceeeeccc-C
Confidence 999999999999999999876543 222222333467789999995 799999999999999999999999999 9
Q ss_pred CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 216 IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 216 ~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
|...+.||.+++|| +.|.+|+-|+ +|+.||+|.+.++.. ......|.++.++| .+++|+.|-+++.+.|...
T Consensus 550 htDGascIdis~dG-tklWTGGlDn---tvRcWDlregrqlqq--hdF~SQIfSLg~cP-~~dWlavGMens~vevlh~- 621 (705)
T KOG0639|consen 550 HTDGASCIDISKDG-TKLWTGGLDN---TVRCWDLREGRQLQQ--HDFSSQIFSLGYCP-TGDWLAVGMENSNVEVLHT- 621 (705)
T ss_pred CCCCceeEEecCCC-ceeecCCCcc---ceeehhhhhhhhhhh--hhhhhhheecccCC-CccceeeecccCcEEEEec-
Confidence 99999999999999 6799999998 999999998643221 12346899999999 8999999999999999987
Q ss_pred CCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcE
Q 046451 296 SGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKL 375 (719)
Q Consensus 296 ~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gkl 375 (719)
++...+.+.-|...|.++.|.+.| +++++.+.|+.+..|..--|..+-...+. .....+-.++|.|+
T Consensus 622 skp~kyqlhlheScVLSlKFa~cG-kwfvStGkDnlLnawrtPyGasiFqskE~------------SsVlsCDIS~ddky 688 (705)
T KOG0639|consen 622 SKPEKYQLHLHESCVLSLKFAYCG-KWFVSTGKDNLLNAWRTPYGASIFQSKES------------SSVLSCDISFDDKY 688 (705)
T ss_pred CCccceeecccccEEEEEEecccC-ceeeecCchhhhhhccCccccceeecccc------------CcceeeeeccCceE
Confidence 455566778899999999999999 89999999999999998877654422211 12234566788888
Q ss_pred EEEccC
Q 046451 376 VSFHPK 381 (719)
Q Consensus 376 v~~~~~ 381 (719)
++-+..
T Consensus 689 IVTGSG 694 (705)
T KOG0639|consen 689 IVTGSG 694 (705)
T ss_pred EEecCC
Confidence 776543
No 135
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.89 E-value=3.9e-22 Score=202.77 Aligned_cols=274 Identities=16% Similarity=0.232 Sum_probs=209.8
Q ss_pred CceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEE--cCCCcEEEEcCCccccCCCCCCCCc
Q 046451 38 SANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGG--LVDGSIDIWNPLSLISSGETGGNPL 115 (719)
Q Consensus 38 ~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasg--s~dg~I~lwd~~~~~~~~~~~~~~~ 115 (719)
...++|||....+....+. .......++++.|+... .|+++ +.|..|++|.-... .+ ....
T Consensus 11 gd~~kl~D~s~~~~~~~~~---~~t~~pg~~s~~w~~~n---------~lvvas~~gdk~~~~~~K~g~----~~-~Vp~ 73 (673)
T KOG4378|consen 11 GDKTKLSDFSDLETKSEYV---HQTAEPGDFSFNWQRRN---------FLVVASMAGDKVMRIKEKDGK----TP-EVPR 73 (673)
T ss_pred CCceEEeecccccCccccc---cCCCCCcceeeeccccc---------eEEEeecCCceeEEEecccCC----CC-ccce
Confidence 4456899998666554432 22334459999999874 35444 45778889974321 11 0022
Q ss_pred eeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC
Q 046451 116 IAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195 (719)
Q Consensus 116 ~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d 195 (719)
+..+.+. .-.|++... -..++++|+..+.|+|||++.....+. ..+|.+.|+++.++..+ .+|++++..
T Consensus 74 ~~k~~gd--~~~Cv~~~s-~S~y~~sgG~~~~Vkiwdl~~kl~hr~-------lkdh~stvt~v~YN~~D-eyiAsvs~g 142 (673)
T KOG4378|consen 74 VRKLTGD--NAFCVACAS-QSLYEISGGQSGCVKIWDLRAKLIHRF-------LKDHQSTVTYVDYNNTD-EYIASVSDG 142 (673)
T ss_pred eeccccc--hHHHHhhhh-cceeeeccCcCceeeehhhHHHHHhhh-------ccCCcceeEEEEecCCc-ceeEEeccC
Confidence 2233322 334555444 347999999999999999995433322 34588899999999887 499999999
Q ss_pred CcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCC
Q 046451 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPN 275 (719)
Q Consensus 196 g~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~ 275 (719)
|.|.|..+.++.....|.......+.-+.|++..+.+|.+++++| .|.+||+............|..+...|+|+|.
T Consensus 143 Gdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G---~VtlwDv~g~sp~~~~~~~HsAP~~gicfsps 219 (673)
T KOG4378|consen 143 GDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKG---AVTLWDVQGMSPIFHASEAHSAPCRGICFSPS 219 (673)
T ss_pred CcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCC---eEEEEeccCCCcccchhhhccCCcCcceecCC
Confidence 999999999999888888666778889999999988888999988 99999997654444556789999999999998
Q ss_pred CCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 276 DSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 276 d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+..+|++.+.|.+|.+||+++.+....+.. ......++|+++| .+|+.|+..|.|..||++..+.-.
T Consensus 220 ne~l~vsVG~Dkki~~yD~~s~~s~~~l~y-~~Plstvaf~~~G-~~L~aG~s~G~~i~YD~R~~k~Pv 286 (673)
T KOG4378|consen 220 NEALLVSVGYDKKINIYDIRSQASTDRLTY-SHPLSTVAFSECG-TYLCAGNSKGELIAYDMRSTKAPV 286 (673)
T ss_pred ccceEEEecccceEEEeecccccccceeee-cCCcceeeecCCc-eEEEeecCCceEEEEecccCCCCc
Confidence 888999999999999999998777666644 3458899999999 899999999999999999876544
No 136
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=1.8e-23 Score=221.61 Aligned_cols=234 Identities=22% Similarity=0.375 Sum_probs=205.1
Q ss_pred CCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEE
Q 046451 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLAS 141 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~las 141 (719)
.|...|.|+..-..+ +.+++|+.|-.+-||.+. .- ..+..+.+|...|.+|.|+. +..+|+.
T Consensus 26 ~hsaav~~lk~~~s~--------r~~~~Gg~~~k~~L~~i~------kp---~~i~S~~~hespIeSl~f~~-~E~Llaa 87 (825)
T KOG0267|consen 26 AHSAAVGCLKIRKSS--------RSLVTGGEDEKVNLWAIG------KP---NAITSLTGHESPIESLTFDT-SERLLAA 87 (825)
T ss_pred hhhhhhceeeeeccc--------eeeccCCCceeecccccc------CC---chhheeeccCCcceeeecCc-chhhhcc
Confidence 377788888874444 789999999999999983 22 44556899999999999998 7899999
Q ss_pred EeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCcee
Q 046451 142 GADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCS 221 (719)
Q Consensus 142 gs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~ 221 (719)
|+.+|+|++||++..+.+++ | .+|...+..+.|+|-+. +++.|+.|+.+.+||++...++..+. +|...+.
T Consensus 88 gsasgtiK~wDleeAk~vrt---L----tgh~~~~~sv~f~P~~~-~~a~gStdtd~~iwD~Rk~Gc~~~~~-s~~~vv~ 158 (825)
T KOG0267|consen 88 GSASGTIKVWDLEEAKIVRT---L----TGHLLNITSVDFHPYGE-FFASGSTDTDLKIWDIRKKGCSHTYK-SHTRVVD 158 (825)
T ss_pred cccCCceeeeehhhhhhhhh---h----hccccCcceeeeccceE-EeccccccccceehhhhccCceeeec-CCcceeE
Confidence 99999999999998887665 2 45778999999999984 78999999999999999999999998 6999999
Q ss_pred EEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEE
Q 046451 222 VLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301 (719)
Q Consensus 222 ~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~ 301 (719)
++.|+|+| .+++.+++|. +++|||+..+ +.+.+|..|...+..+.|+| ..-++++|+.|++|++||+++.+.+.
T Consensus 159 ~l~lsP~G-r~v~~g~ed~---tvki~d~~ag-k~~~ef~~~e~~v~sle~hp-~e~Lla~Gs~d~tv~f~dletfe~I~ 232 (825)
T KOG0267|consen 159 VLRLSPDG-RWVASGGEDN---TVKIWDLTAG-KLSKEFKSHEGKVQSLEFHP-LEVLLAPGSSDRTVRFWDLETFEVIS 232 (825)
T ss_pred EEeecCCC-ceeeccCCcc---eeeeeccccc-ccccccccccccccccccCc-hhhhhccCCCCceeeeeccceeEEee
Confidence 99999999 5788888887 9999999765 77899999999999999999 88899999999999999999999999
Q ss_pred EecCCCCCeEEeEEcCCCCCEEEEEeCC
Q 046451 302 ELPAGTNWNFDIHWYPKIPGVISASSFD 329 (719)
Q Consensus 302 ~l~~h~~~v~~l~~spdg~~~las~s~D 329 (719)
..+.....|.++.|++++ ..+.+|..+
T Consensus 233 s~~~~~~~v~~~~fn~~~-~~~~~G~q~ 259 (825)
T KOG0267|consen 233 SGKPETDGVRSLAFNPDG-KIVLSGEQI 259 (825)
T ss_pred ccCCccCCceeeeecCCc-eeeecCchh
Confidence 888888899999999999 677777644
No 137
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.89 E-value=2.2e-21 Score=187.18 Aligned_cols=264 Identities=19% Similarity=0.318 Sum_probs=199.0
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeC-CCCCEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNS-FTPNLL 139 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp-~~~~~l 139 (719)
.+|.+-|+|+.|...| +.+|+|+.|++|+|||.. ...+.+.+....+.|.+.|..+.|.+ .=|+.+
T Consensus 10 s~h~DlihdVs~D~~G--------RRmAtCSsDq~vkI~d~~-----~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvv 76 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYG--------RRMATCSSDQTVKIWDST-----SDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVV 76 (361)
T ss_pred cCCcceeeeeeecccC--------ceeeeccCCCcEEEEecc-----CCCCceEEeeeEEecCCcEEEEEecCccccceE
Confidence 3577889999999999 899999999999999974 33344577788889999999999954 347899
Q ss_pred EEEeCCCcEEEEcCCCCCCC---CccCCccCCCCCCCCCeEEEEecCCC-CcEEEEEeCCCcEEEEECCCCce------e
Q 046451 140 ASGADDGEICIWDLSAPAEP---SHFPPLRGNGSAAQGEISFVSWNSKV-QHILASTSYNGTTVVWDLKKQKP------V 209 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~---~~~~~l~~~~~~h~~~I~~l~~sp~g-~~~l~s~s~dg~I~iwd~~~~~~------~ 209 (719)
|+++.|+++.||.=...... +... ........++.|+++.|.|.. +-.+++++.||.|+||+.-.--. .
T Consensus 77 A~cS~Drtv~iWEE~~~~~~~~~~~Wv-~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq 155 (361)
T KOG2445|consen 77 ATCSYDRTVSIWEEQEKSEEAHGRRWV-RRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQ 155 (361)
T ss_pred EEEecCCceeeeeecccccccccceeE-EEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhh
Confidence 99999999999975321111 0110 222334457789999998852 24789999999999998754322 1
Q ss_pred EEec------CCCCCceeEEEECCCC--CcEEEEEeCCC--CCCcEEEEecCCCC---CceEEeeCCCCCeeEEEeCCCC
Q 046451 210 ISFS------ESIKRRCSVLQWNPDV--ATQLVVASDED--SSPALRLWDMRNTM---SPVKEFVGHTKGVIAMSWCPND 276 (719)
Q Consensus 210 ~~~~------~~~~~~i~~l~~sp~g--~~~l~~~s~d~--~~~~I~lwDl~~~~---~~~~~~~~h~~~V~~v~~sp~d 276 (719)
..+. ..+.....|+.|++.. +.+|++|+++. ..+.++||...... ..+.++.+|...|++|+|.|+-
T Consensus 156 ~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~ 235 (361)
T KOG2445|consen 156 HEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNI 235 (361)
T ss_pred hhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeecccc
Confidence 1221 1356778899999753 34688888772 12358888765433 2355678999999999999965
Q ss_pred CC---eEEEEeCCCcEEEEECCC--------------------CeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEE
Q 046451 277 SS---YLLTCAKDNRTICWDTVS--------------------GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIG 333 (719)
Q Consensus 277 ~~---~l~sgs~Dg~I~iwd~~~--------------------~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~ 333 (719)
|+ +|++++.|| |+||++.. -+.+.++.+|++.|+.+.|+-.| .+|++.+.||.|+
T Consensus 236 Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtG-tiLsStGdDG~VR 313 (361)
T KOG2445|consen 236 GRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTG-TILSSTGDDGCVR 313 (361)
T ss_pred CCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeee-eEEeecCCCceee
Confidence 54 789999999 99999872 13566788999999999999999 8999999999999
Q ss_pred EEeCCCC
Q 046451 334 IYNIEGC 340 (719)
Q Consensus 334 iwd~~~~ 340 (719)
+|...-.
T Consensus 314 LWkany~ 320 (361)
T KOG2445|consen 314 LWKANYN 320 (361)
T ss_pred ehhhhhh
Confidence 9986543
No 138
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.89 E-value=1.4e-21 Score=197.61 Aligned_cols=294 Identities=20% Similarity=0.305 Sum_probs=218.8
Q ss_pred ccCccceEEEcCCC--CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 6 GINRSASVAFAPDA--PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 6 ~~~~V~~vafSpdg--~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
...+|++++|+|.. +++|+|+..|.| -+||+...+.+..- ......|...|.+|.|+|...
T Consensus 185 ~~~Rit~l~fHPt~~~~lva~GdK~G~V----------G~Wn~~~~~~d~d~-v~~f~~hs~~Vs~l~F~P~n~------ 247 (498)
T KOG4328|consen 185 TDRRITSLAFHPTENRKLVAVGDKGGQV----------GLWNFGTQEKDKDG-VYLFTPHSGPVSGLKFSPANT------ 247 (498)
T ss_pred cccceEEEEecccCcceEEEEccCCCcE----------EEEecCCCCCccCc-eEEeccCCccccceEecCCCh------
Confidence 34789999999976 588999887777 78999644333322 233467999999999999875
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
..|++.+.||+|++-|++.... +.+..+......+.++.|+. +...++.+..=|...+||+++.+.....
T Consensus 248 -s~i~ssSyDGtiR~~D~~~~i~-------e~v~s~~~d~~~fs~~d~~~-e~~~vl~~~~~G~f~~iD~R~~~s~~~~- 317 (498)
T KOG4328|consen 248 -SQIYSSSYDGTIRLQDFEGNIS-------EEVLSLDTDNIWFSSLDFSA-ESRSVLFGDNVGNFNVIDLRTDGSEYEN- 317 (498)
T ss_pred -hheeeeccCceeeeeeecchhh-------HHHhhcCccceeeeeccccC-CCccEEEeecccceEEEEeecCCccchh-
Confidence 7899999999999999954322 44444444556778888988 5556666666679999999987753221
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce-----eEEecCCCCCceeEEEECCCCCcEEEEEeC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP-----VISFSESIKRRCSVLQWNPDVATQLVVASD 238 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~-----~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~ 238 (719)
+ ..|+..|++++++|....+|++++.|++++|||++.-.. +.++ .|...|.+..|||++.. |++.+.
T Consensus 318 -~----~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~--~HrrsV~sAyFSPs~gt-l~TT~~ 389 (498)
T KOG4328|consen 318 -L----RLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTL--PHRRSVNSAYFSPSGGT-LLTTCQ 389 (498)
T ss_pred -h----hhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecc--cccceeeeeEEcCCCCc-eEeecc
Confidence 2 236669999999999889999999999999999986322 3333 59999999999999977 666666
Q ss_pred CCCCCcEEEEecC---CCCCceEEeeCCC----C--CeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCC-
Q 046451 239 EDSSPALRLWDMR---NTMSPVKEFVGHT----K--GVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTN- 308 (719)
Q Consensus 239 d~~~~~I~lwDl~---~~~~~~~~~~~h~----~--~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~- 308 (719)
|+ .|+|||.. ....+..++. |. . ......|.| +..+|++|..-..|-|||-..++.+.++.....
T Consensus 390 D~---~IRv~dss~~sa~~~p~~~I~-Hn~~t~RwlT~fKA~W~P-~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~ 464 (498)
T KOG4328|consen 390 DN---EIRVFDSSCISAKDEPLGTIP-HNNRTGRWLTPFKAAWDP-DYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESS 464 (498)
T ss_pred CC---ceEEeecccccccCCccceee-ccCcccccccchhheeCC-CccEEEEeccCcceeEEcCCCCEEeeeccCcccc
Confidence 66 79999984 2223444443 22 2 234567999 889999999999999999999998888755433
Q ss_pred CeEE-eEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 309 WNFD-IHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 309 ~v~~-l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
.|.+ ..|+|-+..+++.++..|.|+||.-+.
T Consensus 465 tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k~ 496 (498)
T KOG4328|consen 465 TIPSVNEFHPMRDTLAAGGNSSGKIYVFTNKK 496 (498)
T ss_pred ccccceeecccccceeccCCccceEEEEecCC
Confidence 4444 489998833666667778888886544
No 139
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=1.5e-23 Score=222.03 Aligned_cols=255 Identities=19% Similarity=0.372 Sum_probs=215.8
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+++.+..+-.+++||.. .+..|...+.++..-. ..+.+++|+.|..+-+|.+.....+..
T Consensus 6 ~~m~~~~~t~Lr~~~~~---------------~~~~hsaav~~lk~~~-s~r~~~~Gg~~~k~~L~~i~kp~~i~S---- 65 (825)
T KOG0267|consen 6 FLMKTKRATKLRVWDTR---------------EFVAHSAAVGCLKIRK-SSRSLVTGGEDEKVNLWAIGKPNAITS---- 65 (825)
T ss_pred ccceeeeeeccccccch---------------hhhhhhhhhceeeeec-cceeeccCCCceeeccccccCCchhhe----
Confidence 44555556667788873 2345888888888844 778999999999999999887665533
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
..+|...|.+|.|+... .+|++|+.+|+|++||++..+.++++. +|...+.++.|+|.+. +++.++.|. .+
T Consensus 66 ---~~~hespIeSl~f~~~E-~LlaagsasgtiK~wDleeAk~vrtLt-gh~~~~~sv~f~P~~~-~~a~gStdt---d~ 136 (825)
T KOG0267|consen 66 ---LTGHESPIESLTFDTSE-RLLAAGSASGTIKVWDLEEAKIVRTLT-GHLLNITSVDFHPYGE-FFASGSTDT---DL 136 (825)
T ss_pred ---eeccCCcceeeecCcch-hhhcccccCCceeeeehhhhhhhhhhh-ccccCcceeeeccceE-Eeccccccc---cc
Confidence 34688999999999984 699999999999999999999999998 8999999999999984 668888887 89
Q ss_pred EEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEE
Q 046451 246 RLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISA 325 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las 325 (719)
++||.+.. .+.+.+.+|...|..+.|+| +|++++.+++|+.++|||...|+.+.+|..|...+..+.|+|.. .++++
T Consensus 137 ~iwD~Rk~-Gc~~~~~s~~~vv~~l~lsP-~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e-~Lla~ 213 (825)
T KOG0267|consen 137 KIWDIRKK-GCSHTYKSHTRVVDVLRLSP-DGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLE-VLLAP 213 (825)
T ss_pred eehhhhcc-CceeeecCCcceeEEEeecC-CCceeeccCCcceeeeecccccccccccccccccccccccCchh-hhhcc
Confidence 99999864 67888999999999999999 99999999999999999999999999999999999999999998 89999
Q ss_pred EeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCC
Q 046451 326 SSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 326 ~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
|+.|++|++||+++-+.+..++.+ +..+.+..|..+|+.+..+....
T Consensus 214 Gs~d~tv~f~dletfe~I~s~~~~-----------~~~v~~~~fn~~~~~~~~G~q~s 260 (825)
T KOG0267|consen 214 GSSDRTVRFWDLETFEVISSGKPE-----------TDGVRSLAFNPDGKIVLSGEQIS 260 (825)
T ss_pred CCCCceeeeeccceeEEeeccCCc-----------cCCceeeeecCCceeeecCchhh
Confidence 999999999999998887754433 22345678888888877665444
No 140
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.89 E-value=5.8e-22 Score=195.84 Aligned_cols=258 Identities=20% Similarity=0.371 Sum_probs=193.0
Q ss_pred CccccccCccceEEEcCCCC--eEEEeeccceeecccCCCceEEEEEeeccC-----------CcccceeecccCCCCCc
Q 046451 1 MACIKGINRSASVAFAPDAP--YMAAGTMAGAVDLSFSSSANLEIFKLDFQS-----------EDRDLLLVGESPSSERF 67 (719)
Q Consensus 1 m~~l~~~~~V~~vafSpdg~--~Latgs~dG~v~v~~s~~~~i~iwd~~~~~-----------~~~~~~~~~~~~~~~~V 67 (719)
|..+.+.+.|.-+.-++-|+ +.|+-+. .+.++||++...- ....-++....+|...=
T Consensus 145 ~~~i~h~g~~NRvr~~~~~~~~~~aswse----------~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EG 214 (440)
T KOG0302|consen 145 MKSIPHYGGINRVRVSRLGNEVLCASWSE----------NGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEG 214 (440)
T ss_pred ccccccccccceeeecccCCcceeeeecc----------cCcEEEEEchhhhhhhcCccccccccccCceEEecccCccc
Confidence 34566777777777666554 4444444 4455788864210 11122334556788888
Q ss_pred eeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCc
Q 046451 68 NRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGE 147 (719)
Q Consensus 68 ~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~ 147 (719)
+.|+|||-.. +.|++|.--+.|++|.. .++.-..-...+.+|+..|.+|+|+|.....|++|+.||+
T Consensus 215 y~LdWSp~~~-------g~LlsGDc~~~I~lw~~------~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~Dgs 281 (440)
T KOG0302|consen 215 YGLDWSPIKT-------GRLLSGDCVKGIHLWEP------STGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGS 281 (440)
T ss_pred eeeecccccc-------cccccCccccceEeeee------ccCceeecCccccccccchhhhccCCccCceEEeeecCce
Confidence 9999999543 67999988899999998 4442223345577899999999999988899999999999
Q ss_pred EEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC---CceeEEecCCCCCceeEEE
Q 046451 148 ICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK---QKPVISFSESIKRRCSVLQ 224 (719)
Q Consensus 148 I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~---~~~~~~~~~~~~~~i~~l~ 224 (719)
|+|||++.+.....+ +. +.|.+.|+-|.|+.+-. +|++|+.||+++|||+|. ++++..|. .|...|++|.
T Consensus 282 IrIWDiRs~~~~~~~--~~---kAh~sDVNVISWnr~~~-lLasG~DdGt~~iwDLR~~~~~~pVA~fk-~Hk~pItsie 354 (440)
T KOG0302|consen 282 IRIWDIRSGPKKAAV--ST---KAHNSDVNVISWNRREP-LLASGGDDGTLSIWDLRQFKSGQPVATFK-YHKAPITSIE 354 (440)
T ss_pred EEEEEecCCCcccee--Ee---eccCCceeeEEccCCcc-eeeecCCCceEEEEEhhhccCCCcceeEE-eccCCeeEEE
Confidence 999999998655443 22 56888999999999864 999999999999999987 45778888 8999999999
Q ss_pred ECCCCCcEEEEEeCCCCCCcEEEEecCCCCC---------------ceEEeeCC--CCCeeEEEeCCCCCCeEEEEeCCC
Q 046451 225 WNPDVATQLVVASDEDSSPALRLWDMRNTMS---------------PVKEFVGH--TKGVIAMSWCPNDSSYLLTCAKDN 287 (719)
Q Consensus 225 ~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~---------------~~~~~~~h--~~~V~~v~~sp~d~~~l~sgs~Dg 287 (719)
|+|.....|++++.|+ .|.|||+.-... +-..+--| ...|..+.|+++...+|++.+.||
T Consensus 355 W~p~e~s~iaasg~D~---QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG 431 (440)
T KOG0302|consen 355 WHPHEDSVIAASGEDN---QITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG 431 (440)
T ss_pred eccccCceEEeccCCC---cEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc
Confidence 9999888899999998 999999853211 00112223 357889999998888999999988
Q ss_pred cEEEE
Q 046451 288 RTICW 292 (719)
Q Consensus 288 ~I~iw 292 (719)
. .||
T Consensus 432 f-nVf 435 (440)
T KOG0302|consen 432 F-NVF 435 (440)
T ss_pred e-eEE
Confidence 4 344
No 141
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.89 E-value=5.7e-22 Score=201.23 Aligned_cols=269 Identities=16% Similarity=0.235 Sum_probs=210.7
Q ss_pred CceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCcee
Q 046451 38 SANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIA 117 (719)
Q Consensus 38 ~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~ 117 (719)
...|.+|.+....... ...-..+.|.|++-+++| .+|+.|+..|.|++|.+ .+| ..+.
T Consensus 60 rp~l~vw~i~k~~~~~-----q~~v~Pg~v~al~s~n~G--------~~l~ag~i~g~lYlWel------ssG---~LL~ 117 (476)
T KOG0646|consen 60 RPLLHVWEILKKDQVV-----QYIVLPGPVHALASSNLG--------YFLLAGTISGNLYLWEL------SSG---ILLN 117 (476)
T ss_pred CccccccccCchhhhh-----hhcccccceeeeecCCCc--------eEEEeecccCcEEEEEe------ccc---cHHH
Confidence 3456788776433222 223457889999999998 68888889999999999 778 9999
Q ss_pred eeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCC---CCCccCCccCCCCCCCCCeEEEEecCCC-CcEEEEEe
Q 046451 118 HLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPA---EPSHFPPLRGNGSAAQGEISFVSWNSKV-QHILASTS 193 (719)
Q Consensus 118 ~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~---~~~~~~~l~~~~~~h~~~I~~l~~sp~g-~~~l~s~s 193 (719)
.+..|-..|+|+.|+- |+.+|++|+.||.|.+|++..-- ...... .......|.-.|+++.....| ...|++++
T Consensus 118 v~~aHYQ~ITcL~fs~-dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~-p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS 195 (476)
T KOG0646|consen 118 VLSAHYQSITCLKFSD-DGSHIITGSKDGAVLVWLLTDLVSADNDHSVK-PLHIFSDHTLSITDLQIGSGGTNARLYTAS 195 (476)
T ss_pred HHHhhccceeEEEEeC-CCcEEEecCCCccEEEEEEEeecccccCCCcc-ceeeeccCcceeEEEEecCCCccceEEEec
Confidence 9999999999999998 89999999999999999874321 111111 122345688899999887652 24899999
Q ss_pred CCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC---------------CceE
Q 046451 194 YNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM---------------SPVK 258 (719)
Q Consensus 194 ~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~---------------~~~~ 258 (719)
.|.++++||+..+..+.++. ....+.+++.+|-+ +.+++|+.+| .|.+.++.+.. ..+.
T Consensus 196 ~D~t~k~wdlS~g~LLlti~--fp~si~av~lDpae-~~~yiGt~~G---~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~ 269 (476)
T KOG0646|consen 196 EDRTIKLWDLSLGVLLLTIT--FPSSIKAVALDPAE-RVVYIGTEEG---KIFQNLLFKLSGQSAGVNQKGRHEENTQIN 269 (476)
T ss_pred CCceEEEEEeccceeeEEEe--cCCcceeEEEcccc-cEEEecCCcc---eEEeeehhcCCcccccccccccccccceee
Confidence 99999999999999999987 88999999999997 6888999888 78887765322 2356
Q ss_pred EeeCCCC--CeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEe
Q 046451 259 EFVGHTK--GVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336 (719)
Q Consensus 259 ~~~~h~~--~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd 336 (719)
.+.+|.+ .|+|++++- |+.+|++|+.||.|+|||+.+.++++++....+.|+.+.+.+-.+..+..-...-.+-.|+
T Consensus 270 ~~~Gh~~~~~ITcLais~-DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~~~~~~l~~~~~ps~~~~~ 348 (476)
T KOG0646|consen 270 VLVGHENESAITCLAIST-DGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPLERGIILFEHKQPSLPNPH 348 (476)
T ss_pred eeccccCCcceeEEEEec-CccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeeccccceecccccCccCCchH
Confidence 6788988 999999999 9999999999999999999999999998767788999999765433444333333444444
Q ss_pred C
Q 046451 337 I 337 (719)
Q Consensus 337 ~ 337 (719)
+
T Consensus 349 l 349 (476)
T KOG0646|consen 349 L 349 (476)
T ss_pred h
Confidence 4
No 142
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.89 E-value=3.5e-21 Score=184.40 Aligned_cols=298 Identities=17% Similarity=0.310 Sum_probs=222.7
Q ss_pred cccCccceEEEcC-CCCeEEEeeccceeecccCCCceEEEEEeeccCCcc--cce--------eecccCCCCCceeeeec
Q 046451 5 KGINRSASVAFAP-DAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDR--DLL--------LVGESPSSERFNRLAWG 73 (719)
Q Consensus 5 ~~~~~V~~vafSp-dg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~--~~~--------~~~~~~~~~~V~~l~~s 73 (719)
.|-+.|+++...+ .|+|+++|+.||.+ .+||++...... .+. ......|+..|.++.|-
T Consensus 41 ~HgGsvNsL~id~tegrymlSGgadgsi----------~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~Wy 110 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTEGRYMLSGGADGSI----------AVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWY 110 (397)
T ss_pred cCCCccceeeeccccceEEeecCCCccE----------EEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEe
Confidence 3557788888887 47899999988877 778887544111 111 12234688899999999
Q ss_pred CCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCC--CEEEEEeCCCcEEEE
Q 046451 74 KNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTP--NLLASGADDGEICIW 151 (719)
Q Consensus 74 p~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~--~~lasgs~dg~I~iw 151 (719)
|... +++.+++.|.+++|||..+ . +....|+ ..+.|.+-+++|-.. .++|+|..|-.|++.
T Consensus 111 P~Dt-------GmFtssSFDhtlKVWDtnT------l---Q~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLC 173 (397)
T KOG4283|consen 111 PIDT-------GMFTSSSFDHTLKVWDTNT------L---QEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLC 173 (397)
T ss_pred eecC-------ceeecccccceEEEeeccc------c---eeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEE
Confidence 9754 7999999999999999943 2 3333333 456788878877432 478889999999999
Q ss_pred cCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC-ceeEEe-------------cCCCC
Q 046451 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ-KPVISF-------------SESIK 217 (719)
Q Consensus 152 dl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~-~~~~~~-------------~~~~~ 217 (719)
|+..+..... ..+|.+.|.++.|+|..+.+|++|+.||.|++||++.. .+...+ ...|.
T Consensus 174 Di~SGs~sH~-------LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~ 246 (397)
T KOG4283|consen 174 DIASGSFSHT-------LSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHY 246 (397)
T ss_pred eccCCcceee-------eccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCcccccccccc
Confidence 9999986554 35799999999999999889999999999999999864 222222 12578
Q ss_pred CceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEee--CCCC----CeeEEEeCCCCCCeEEEEeCCCcEEE
Q 046451 218 RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFV--GHTK----GVIAMSWCPNDSSYLLTCAKDNRTIC 291 (719)
Q Consensus 218 ~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~--~h~~----~V~~v~~sp~d~~~l~sgs~Dg~I~i 291 (719)
+.+..++|+.++. ++++++.|+ .+++|+..++...++.+. .|.. .+. +. +- +...++---.|+.+.+
T Consensus 247 gkvngla~tSd~~-~l~~~gtd~---r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~-~~-~~-~s~vfv~~p~~~~lal 319 (397)
T KOG4283|consen 247 GKVNGLAWTSDAR-YLASCGTDD---RIRVWNMESGRNTLREFGPIIHNQTTSFAVH-IQ-SM-DSDVFVLFPNDGSLAL 319 (397)
T ss_pred ceeeeeeecccch-hhhhccCcc---ceEEeecccCcccccccccccccccccceEE-Ee-ec-ccceEEEEecCCeEEE
Confidence 8999999999996 566666666 799999988765444331 1111 111 22 32 4455555566799999
Q ss_pred EECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 292 WDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 292 wd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+++-+++.+..+..|...|.+..+.++- ..+.++..|+.|..|-..-.....
T Consensus 320 l~~~sgs~ir~l~~h~k~i~c~~~~~~f-q~~~tg~~d~ni~~w~p~l~~pt~ 371 (397)
T KOG4283|consen 320 LNLLEGSFVRRLSTHLKRINCAAYRPDF-EQCFTGDMNGNIYMWSPALKSPTK 371 (397)
T ss_pred EEccCceEEEeeecccceeeEEeecCch-hhhhccccCCccccccccccCCcc
Confidence 9999999999999998899999999988 688999999999999885444433
No 143
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.89 E-value=3.2e-21 Score=200.92 Aligned_cols=172 Identities=20% Similarity=0.325 Sum_probs=136.8
Q ss_pred CceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC------CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEE
Q 046451 218 RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM------SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC 291 (719)
Q Consensus 218 ~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~------~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~i 291 (719)
..|+.+.|+|-....|+++++|+ .|+||.+..+. .+...+.+|...|+++.|+|--.++|++++.|.+|+|
T Consensus 628 t~vtDl~WdPFD~~rLAVa~ddg---~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~l 704 (1012)
T KOG1445|consen 628 TLVTDLHWDPFDDERLAVATDDG---QINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIEL 704 (1012)
T ss_pred ceeeecccCCCChHHeeecccCc---eEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeee
Confidence 34666788887778899999998 99999986532 4567788999999999999977889999999999999
Q ss_pred EECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc-cCCCCCCCCCccCcceecCCCceeee
Q 046451 292 WDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG-VGDSNFSAAPLRAPKWYKRPAGASFG 370 (719)
Q Consensus 292 wd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~-~~~~~~~~~~~~~p~w~~~~~~~s~s 370 (719)
||+.+++....+.+|.+.|++++||+|| +.+|+.+.||+|+||+-.+++.-. .+....+ .+...+.|.
T Consensus 705 WDl~~~~~~~~l~gHtdqIf~~AWSpdG-r~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvg----------tRgARi~wa 773 (1012)
T KOG1445|consen 705 WDLANAKLYSRLVGHTDQIFGIAWSPDG-RRIATVCKDGTLRVYEPRSREQPVYEGKGPVG----------TRGARILWA 773 (1012)
T ss_pred eehhhhhhhheeccCcCceeEEEECCCC-cceeeeecCceEEEeCCCCCCCccccCCCCcc----------CcceeEEEE
Confidence 9999999999999999999999999999 899999999999999988876533 2222222 123457899
Q ss_pred eCCcEEEEccCCCCCccc--------cccccccceeeccCC
Q 046451 371 FGGKLVSFHPKSSAGHTS--------ENSQHAPVHGVDQSK 403 (719)
Q Consensus 371 ~~Gklv~~~~~~~~~~~~--------~~~~~~~v~~v~~s~ 403 (719)
.||+++++..-++..+|. +.+....+.++|++|
T Consensus 774 cdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvap 814 (1012)
T KOG1445|consen 774 CDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAP 814 (1012)
T ss_pred ecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccC
Confidence 999999888777765544 343444455555543
No 144
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.89 E-value=1.7e-20 Score=191.53 Aligned_cols=306 Identities=16% Similarity=0.223 Sum_probs=221.8
Q ss_pred CccceEEEcCCCC-eEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 8 NRSASVAFAPDAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 8 ~~V~~vafSpdg~-~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
+.|..+.|+|.+. +|++.+ .+.+.+|+...+...++..+.... .+.-|.|++|.++| -
T Consensus 201 e~v~~a~FHPtd~nliit~G-----------k~H~~Fw~~~~~~l~k~~~~fek~-ekk~Vl~v~F~eng---------d 259 (626)
T KOG2106|consen 201 EVVFLATFHPTDPNLIITCG-----------KGHLYFWTLRGGSLVKRQGIFEKR-EKKFVLCVTFLENG---------D 259 (626)
T ss_pred ceEEEEEeccCCCcEEEEeC-----------CceEEEEEccCCceEEEeeccccc-cceEEEEEEEcCCC---------C
Confidence 4467789999775 555553 344588888766554443333322 33789999999996 5
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC---
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP--- 163 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~--- 163 (719)
+++|..+|.|.||+. ... +..+....|.+.|.+++... ++ .|++|+.|..|..||-. -+..+...
T Consensus 260 viTgDS~G~i~Iw~~------~~~---~~~k~~~aH~ggv~~L~~lr-~G-tllSGgKDRki~~Wd~~-y~k~r~~elPe 327 (626)
T KOG2106|consen 260 VITGDSGGNILIWSK------GTN---RISKQVHAHDGGVFSLCMLR-DG-TLLSGGKDRKIILWDDN-YRKLRETELPE 327 (626)
T ss_pred EEeecCCceEEEEeC------CCc---eEEeEeeecCCceEEEEEec-Cc-cEeecCccceEEecccc-ccccccccCch
Confidence 899999999999997 333 55555568999999999987 55 45569999999999932 11111100
Q ss_pred -----------------------Ccc--------CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEe
Q 046451 164 -----------------------PLR--------GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF 212 (719)
Q Consensus 164 -----------------------~l~--------~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~ 212 (719)
.|. ....+|.+..+.++.+++. .++++++.|+.+++|+ ..+.+.+.
T Consensus 328 ~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~-~q~~T~gqdk~v~lW~--~~k~~wt~ 404 (626)
T KOG2106|consen 328 QFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSK-NQLLTCGQDKHVRLWN--DHKLEWTK 404 (626)
T ss_pred hcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCCh-hheeeccCcceEEEcc--CCceeEEE
Confidence 011 1112456678888999985 6899999999999999 55666665
Q ss_pred cCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEE
Q 046451 213 SESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292 (719)
Q Consensus 213 ~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iw 292 (719)
. ....+.++.|+|.| .+++|...+ ...+.|.++. ..+.... ....+++++|+| +|.+||.|+.|+.|+||
T Consensus 405 ~--~~d~~~~~~fhpsg--~va~Gt~~G---~w~V~d~e~~-~lv~~~~-d~~~ls~v~ysp-~G~~lAvgs~d~~iyiy 474 (626)
T KOG2106|consen 405 I--IEDPAECADFHPSG--VVAVGTATG---RWFVLDTETQ-DLVTIHT-DNEQLSVVRYSP-DGAFLAVGSHDNHIYIY 474 (626)
T ss_pred E--ecCceeEeeccCcc--eEEEeeccc---eEEEEecccc-eeEEEEe-cCCceEEEEEcC-CCCEEEEecCCCeEEEE
Confidence 5 67889999999998 688888888 8999999773 3333333 378999999999 99999999999999999
Q ss_pred ECCCC-eEEEEe-cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceee
Q 046451 293 DTVSG-EIVSEL-PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASF 369 (719)
Q Consensus 293 d~~~~-~~~~~l-~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~ 369 (719)
.+..+ ...... +.+...|+.+.|+.|+ ++|.+-+.|-.|..|.-........ .+..+|....+.+.|
T Consensus 475 ~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds-~~~~~~S~d~eiLyW~~~~~~~~ts---------~kDvkW~t~~c~lGF 543 (626)
T KOG2106|consen 475 RVSANGRKYSRVGKCSGSPITHLDWSSDS-QFLVSNSGDYEILYWKPSECKQITS---------VKDVKWATYTCTLGF 543 (626)
T ss_pred EECCCCcEEEEeeeecCceeEEeeecCCC-ceEEeccCceEEEEEccccCcccce---------ecceeeeeeEEEEEE
Confidence 87643 333322 2234789999999999 8999999999999995444443321 355668766554444
No 145
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.88 E-value=3.4e-21 Score=195.97 Aligned_cols=269 Identities=17% Similarity=0.286 Sum_probs=212.0
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEE
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVA 88 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~la 88 (719)
.+.++.|+.... |++++..| ++.+++|.-+.. ..++.++...+. ..-+|++..... .+++
T Consensus 36 g~~s~~w~~~n~-lvvas~~g--------dk~~~~~~K~g~--~~~Vp~~~k~~g-d~~~Cv~~~s~S--------~y~~ 95 (673)
T KOG4378|consen 36 GDFSFNWQRRNF-LVVASMAG--------DKVMRIKEKDGK--TPEVPRVRKLTG-DNAFCVACASQS--------LYEI 95 (673)
T ss_pred cceeeeccccce-EEEeecCC--------ceeEEEecccCC--CCccceeecccc-chHHHHhhhhcc--------eeee
Confidence 477888887665 66666544 455677765533 223333332222 234455444433 6899
Q ss_pred EEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCC
Q 046451 89 GGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGN 168 (719)
Q Consensus 89 sgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~ 168 (719)
+|+..+.|+|||+. .. .+.+.+++|...|+++.++. ...+||+++..|.|.|..+.++.....| ..
T Consensus 96 sgG~~~~Vkiwdl~------~k---l~hr~lkdh~stvt~v~YN~-~DeyiAsvs~gGdiiih~~~t~~~tt~f---~~- 161 (673)
T KOG4378|consen 96 SGGQSGCVKIWDLR------AK---LIHRFLKDHQSTVTYVDYNN-TDEYIASVSDGGDIIIHGTKTKQKTTTF---TI- 161 (673)
T ss_pred ccCcCceeeehhhH------HH---HHhhhccCCcceeEEEEecC-CcceeEEeccCCcEEEEecccCccccce---ec-
Confidence 99999999999993 33 66778899999999999998 6799999999999999999988776554 11
Q ss_pred CCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEE
Q 046451 169 GSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLW 248 (719)
Q Consensus 169 ~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lw 248 (719)
.....|+.+.|++....+|.+++++|.|.+||+....++..+...|......|+|+|..+.+|++.+.|. .|.+|
T Consensus 162 --~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dk---ki~~y 236 (673)
T KOG4378|consen 162 --DSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDK---KINIY 236 (673)
T ss_pred --CCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccc---eEEEe
Confidence 1233677999999988899999999999999999999998888889999999999999999999999998 89999
Q ss_pred ecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC-eEEEEecCCCCCeEEeEEcCCC
Q 046451 249 DMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG-EIVSELPAGTNWNFDIHWYPKI 319 (719)
Q Consensus 249 Dl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~-~~~~~l~~h~~~v~~l~~spdg 319 (719)
|.+.. .....+. ...+...++|++ +|.+|++|...|.|..||++.. ..+..+..|...|++++|-+.-
T Consensus 237 D~~s~-~s~~~l~-y~~Plstvaf~~-~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 237 DIRSQ-ASTDRLT-YSHPLSTVAFSE-CGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP 305 (673)
T ss_pred ecccc-cccceee-ecCCcceeeecC-CceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence 99854 2233332 345788999999 9999999999999999999864 5788889999999999998874
No 146
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.88 E-value=3.1e-21 Score=180.56 Aligned_cols=255 Identities=18% Similarity=0.297 Sum_probs=200.4
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecC--CCCCCCCC
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGK--NGSGSEDF 82 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp--~g~~~~~~ 82 (719)
.|.+-|.++...--|++|||++.|+.| +||.+...... ..+....+|.+.|..++|.. .|
T Consensus 9 ~H~D~IHda~lDyygkrlATcsSD~tV----------kIf~v~~n~~s--~ll~~L~Gh~GPVwqv~wahPk~G------ 70 (299)
T KOG1332|consen 9 QHEDMIHDAQLDYYGKRLATCSSDGTV----------KIFEVRNNGQS--KLLAELTGHSGPVWKVAWAHPKFG------ 70 (299)
T ss_pred hhhhhhhHhhhhhhcceeeeecCCccE----------EEEEEcCCCCc--eeeeEecCCCCCeeEEeecccccC------
Confidence 466778888888899999999888877 88888765442 22345578999999999977 45
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC-CCEEEEEeCCCcEEEEcCCCCCCCCc
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT-PNLLASGADDGEICIWDLSAPAEPSH 161 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~-~~~lasgs~dg~I~iwdl~~~~~~~~ 161 (719)
.+||+++.||.|.||.- ++..+........|...|++++|.|.+ +-.|++++.||.|.|.+.++.....
T Consensus 71 --~iLAScsYDgkVIiWke-------~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~- 140 (299)
T KOG1332|consen 71 --TILASCSYDGKVIIWKE-------ENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWT- 140 (299)
T ss_pred --cEeeEeecCceEEEEec-------CCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCcc-
Confidence 79999999999999995 333557777788899999999999854 4478999999999999988763221
Q ss_pred cCCccCCCCCCCCCeEEEEecCC---C----------CcEEEEEeCCCcEEEEECCCCce--eEEecCCCCCceeEEEEC
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSK---V----------QHILASTSYNGTTVVWDLKKQKP--VISFSESIKRRCSVLQWN 226 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~---g----------~~~l~s~s~dg~I~iwd~~~~~~--~~~~~~~~~~~i~~l~~s 226 (719)
-......|.-.|++++|.|. | -+.|++|+.|..|+||+..+++- ..++. .|.+.|+.++|.
T Consensus 141 ---t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~-~H~dwVRDVAwa 216 (299)
T KOG1332|consen 141 ---TSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLE-GHKDWVRDVAWA 216 (299)
T ss_pred ---chhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhh-hcchhhhhhhhc
Confidence 11223457889999999886 3 14699999999999999988642 23355 899999999999
Q ss_pred CCC---CcEEEEEeCCCCCCcEEEEecCCCCCc--eEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 227 PDV---ATQLVVASDEDSSPALRLWDMRNTMSP--VKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 227 p~g---~~~l~~~s~d~~~~~I~lwDl~~~~~~--~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
|.- ...|++++.|+ +|.||..+...+. ...+......+.++.||. .|++|+.++.|+.|.+|.-.
T Consensus 217 P~~gl~~s~iAS~SqDg---~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~-sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 217 PSVGLPKSTIASCSQDG---TVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSL-SGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred cccCCCceeeEEecCCC---cEEEEEecCccCcccccccccCCcceEEEEEec-cccEEEEecCCcEEEEEEeC
Confidence 964 45799999998 8999988643222 223344557899999999 99999999999999999654
No 147
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=2.8e-20 Score=202.71 Aligned_cols=244 Identities=16% Similarity=0.269 Sum_probs=199.4
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
..|....+.|+|.++| .+|++++.||.|++|+..... ..-..+..+...|.+++. ..++|+
T Consensus 10 yaht~G~t~i~~d~~g--------efi~tcgsdg~ir~~~~~sd~--------e~P~ti~~~g~~v~~ia~---~s~~f~ 70 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDG--------EFICTCGSDGDIRKWKTNSDE--------EEPETIDISGELVSSIAC---YSNHFL 70 (933)
T ss_pred hhccCceEEEEEcCCC--------CEEEEecCCCceEEeecCCcc--------cCCchhhccCceeEEEee---cccceE
Confidence 3577889999999999 699999999999999974321 111222227778888887 456999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
+|+.+++|.+|.+.+++.-..+. ...-.+++++|+.+| .+++.|++|-.|++.++........+. +|...|
T Consensus 71 ~~s~~~tv~~y~fps~~~~~iL~-------Rftlp~r~~~v~g~g-~~iaagsdD~~vK~~~~~D~s~~~~lr-gh~apV 141 (933)
T KOG1274|consen 71 TGSEQNTVLRYKFPSGEEDTILA-------RFTLPIRDLAVSGSG-KMIAAGSDDTAVKLLNLDDSSQEKVLR-GHDAPV 141 (933)
T ss_pred EeeccceEEEeeCCCCCccceee-------eeeccceEEEEecCC-cEEEeecCceeEEEEeccccchheeec-ccCCce
Confidence 99999999999998877543332 234489999999997 599999999999999999998888888 899999
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC-------C-CCCeeEEEeCCCCCCeEEEEeCCCcEEEE
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG-------H-TKGVIAMSWCPNDSSYLLTCAKDNRTICW 292 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~-------h-~~~V~~v~~sp~d~~~l~sgs~Dg~I~iw 292 (719)
.++.|+|.+ .+|++.+.|| .|++||+.++ .+.+++.+ . ...+..++|+| ++..|+..+.|+.|++|
T Consensus 142 l~l~~~p~~-~fLAvss~dG---~v~iw~~~~~-~~~~tl~~v~k~n~~~~s~i~~~~aW~P-k~g~la~~~~d~~Vkvy 215 (933)
T KOG1274|consen 142 LQLSYDPKG-NFLAVSSCDG---KVQIWDLQDG-ILSKTLTGVDKDNEFILSRICTRLAWHP-KGGTLAVPPVDNTVKVY 215 (933)
T ss_pred eeeeEcCCC-CEEEEEecCc---eEEEEEcccc-hhhhhcccCCccccccccceeeeeeecC-CCCeEEeeccCCeEEEE
Confidence 999999998 5899999888 9999999864 33333322 1 34567899999 76777777889999999
Q ss_pred ECCCCeEEEEecC--CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 293 DTVSGEIVSELPA--GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 293 d~~~~~~~~~l~~--h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
+...++....+.. +...+.++.|+|+| .+||+++.||.|.|||+++
T Consensus 216 ~r~~we~~f~Lr~~~~ss~~~~~~wsPnG-~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 216 SRKGWELQFKLRDKLSSSKFSDLQWSPNG-KYIAASTLDGQILVWNVDT 263 (933)
T ss_pred ccCCceeheeecccccccceEEEEEcCCC-cEEeeeccCCcEEEEeccc
Confidence 9999999888764 34458999999999 8999999999999999998
No 148
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.88 E-value=5.3e-20 Score=198.36 Aligned_cols=344 Identities=13% Similarity=0.136 Sum_probs=248.1
Q ss_pred CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEE
Q 046451 20 PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIW 99 (719)
Q Consensus 20 ~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lw 99 (719)
+.|+.|+..|.+ +||++.++....++ .++...|+++.=+|-- +.++.|..+|+|.|+
T Consensus 173 NKIvvGs~~G~l----------ql~Nvrt~K~v~~f-----~~~~s~IT~ieqsPaL--------DVVaiG~~~G~Viif 229 (910)
T KOG1539|consen 173 NKIVVGSSQGRL----------QLWNVRTGKVVYTF-----QEFFSRITAIEQSPAL--------DVVAIGLENGTVIIF 229 (910)
T ss_pred eeEEEeecCCcE----------EEEEeccCcEEEEe-----cccccceeEeccCCcc--------eEEEEeccCceEEEE
Confidence 456777666654 89999977654333 4567999999998875 799999999999999
Q ss_pred cCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEE
Q 046451 100 NPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV 179 (719)
Q Consensus 100 d~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l 179 (719)
|+ ..+ +.+.+++...+.|+.++|..++..++++|+..|.+.+||++..+..... ...|.+.|..+
T Consensus 230 Nl------K~d---kil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~------~nah~~sv~~~ 294 (910)
T KOG1539|consen 230 NL------KFD---KILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVT------RNAHYGSVTGA 294 (910)
T ss_pred Ec------ccC---cEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeee------eccccCCcccc
Confidence 99 556 7788887556999999999866667888888899999999987755432 23577789999
Q ss_pred EecCCCCcEEEEEeCCCcEEEEECCCCc---eeEEecCCCCCceeEEEECCCCCcEEEEEeCCC----------------
Q 046451 180 SWNSKVQHILASTSYNGTTVVWDLKKQK---PVISFSESIKRRCSVLQWNPDVATQLVVASDED---------------- 240 (719)
Q Consensus 180 ~~sp~g~~~l~s~s~dg~I~iwd~~~~~---~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~---------------- 240 (719)
.|.+. +.++++.+.|..+++|=.+++. .+..+..+|..+..+|.|.....+.+.+++.|.
T Consensus 295 ~fl~~-epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l 373 (910)
T KOG1539|consen 295 TFLPG-EPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQEL 373 (910)
T ss_pred eecCC-CceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhh
Confidence 99887 4799999999998888665432 223334478888888887754445666666665
Q ss_pred ----------------------------------------------CCCcEEEEecCCCCCceEEee-----CCCCCeeE
Q 046451 241 ----------------------------------------------SSPALRLWDMRNTMSPVKEFV-----GHTKGVIA 269 (719)
Q Consensus 241 ----------------------------------------------~~~~I~lwDl~~~~~~~~~~~-----~h~~~V~~ 269 (719)
+...++.|++++...-...+. .....+++
T Consensus 374 ~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~a 453 (910)
T KOG1539|consen 374 GQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATA 453 (910)
T ss_pred cccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEE
Confidence 011344455544321112221 12357888
Q ss_pred EEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEe---cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccC
Q 046451 270 MSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSEL---PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVG 346 (719)
Q Consensus 270 v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l---~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~ 346 (719)
++.+. .|++.+.|...|.|-+|++.+|-....+ ..|...|++++...-+ +++++++.||.+++||+.+..+....
T Consensus 454 v~vs~-CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n-~~~vsa~~~Gilkfw~f~~k~l~~~l 531 (910)
T KOG1539|consen 454 VCVSF-CGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTN-RLLVSAGADGILKFWDFKKKVLKKSL 531 (910)
T ss_pred EEEec-cCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCC-ceEEEccCcceEEEEecCCcceeeee
Confidence 99998 8999999999999999999999988888 5899999999999888 79999999999999999998865422
Q ss_pred CCCCCCCCccCcceecCCCceeee-eCCcEEEEccCCCCCccccccccccceeeccCCCCCC
Q 046451 347 DSNFSAAPLRAPKWYKRPAGASFG-FGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGMV 407 (719)
Q Consensus 347 ~~~~~~~~~~~p~w~~~~~~~s~s-~~Gklv~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~ 407 (719)
. ++... ...........++.. -|-.++.++.......|.+.||.+.+..++||+||.=
T Consensus 532 ~--l~~~~-~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrW 590 (910)
T KOG1539|consen 532 R--LGSSI-TGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRW 590 (910)
T ss_pred c--cCCCc-ceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcE
Confidence 2 11111 111111111111222 2334566666555677889999999999999999865
No 149
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.87 E-value=7.3e-21 Score=197.83 Aligned_cols=294 Identities=18% Similarity=0.263 Sum_probs=221.5
Q ss_pred ccccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCC
Q 046451 2 ACIKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSED 81 (719)
Q Consensus 2 ~~l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~ 81 (719)
+...|.+.|.|++..|.|.+||+|+.||+| +||.+.++.+...+ ...+.|.||+|+|.+..
T Consensus 395 vyrGHtg~Vr~iSvdp~G~wlasGsdDGtv----------riWEi~TgRcvr~~------~~d~~I~~vaw~P~~~~--- 455 (733)
T KOG0650|consen 395 VYRGHTGLVRSISVDPSGEWLASGSDDGTV----------RIWEIATGRCVRTV------QFDSEIRSVAWNPLSDL--- 455 (733)
T ss_pred eEeccCCeEEEEEecCCcceeeecCCCCcE----------EEEEeecceEEEEE------eecceeEEEEecCCCCc---
Confidence 445688999999999999999999988877 78888877665443 34568999999998742
Q ss_pred CccceEEEEcCCCcEEEEcCCccccC-----------C---CC--------------CCCCceeeeccccCCEEEEEEeC
Q 046451 82 FSLGLVAGGLVDGSIDIWNPLSLISS-----------G---ET--------------GGNPLIAHLSRHKGPVRGLEFNS 133 (719)
Q Consensus 82 ~~~~~lasgs~dg~I~lwd~~~~~~~-----------~---~~--------------~~~~~~~~l~~h~~~V~~l~fsp 133 (719)
.+||++..+. +.|.+..-.... . +. ....-++....|...|..+.|+.
T Consensus 456 ---~vLAvA~~~~-~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHr 531 (733)
T KOG0650|consen 456 ---CVLAVAVGEC-VLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHR 531 (733)
T ss_pred ---eeEEEEecCc-eEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeec
Confidence 3455443333 444443111000 0 00 00111344556888999999999
Q ss_pred CCCCEEEEEeCC---CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeE
Q 046451 134 FTPNLLASGADD---GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVI 210 (719)
Q Consensus 134 ~~~~~lasgs~d---g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~ 210 (719)
.|+||++...+ ..|.|+++.......-| + ...+.|.++.|+|... +|++++. ..|+|||+.....+.
T Consensus 532 -kGDYlatV~~~~~~~~VliHQLSK~~sQ~PF---~----kskG~vq~v~FHPs~p-~lfVaTq-~~vRiYdL~kqelvK 601 (733)
T KOG0650|consen 532 -KGDYLATVMPDSGNKSVLIHQLSKRKSQSPF---R----KSKGLVQRVKFHPSKP-YLFVATQ-RSVRIYDLSKQELVK 601 (733)
T ss_pred -CCceEEEeccCCCcceEEEEecccccccCch---h----hcCCceeEEEecCCCc-eEEEEec-cceEEEehhHHHHHH
Confidence 89999987654 57899999877655433 2 1355899999999964 5555554 579999999988777
Q ss_pred EecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEE
Q 046451 211 SFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI 290 (719)
Q Consensus 211 ~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~ 290 (719)
.+. .....|..++.++.|.+ |++++.|+ .+..||+.-..++.+++.-|...+++|+|++ .-.+|++|+.||++.
T Consensus 602 kL~-tg~kwiS~msihp~GDn-li~gs~d~---k~~WfDldlsskPyk~lr~H~~avr~Va~H~-ryPLfas~sdDgtv~ 675 (733)
T KOG0650|consen 602 KLL-TGSKWISSMSIHPNGDN-LILGSYDK---KMCWFDLDLSSKPYKTLRLHEKAVRSVAFHK-RYPLFASGSDDGTVI 675 (733)
T ss_pred HHh-cCCeeeeeeeecCCCCe-EEEecCCC---eeEEEEcccCcchhHHhhhhhhhhhhhhhcc-ccceeeeecCCCcEE
Confidence 777 67788999999999975 66677776 7999999888889999999999999999999 788999999999999
Q ss_pred EEECC------CC---eEEEEecCCCCC----eEEeEEcCCCCCEEEEEeCCCcEEEE
Q 046451 291 CWDTV------SG---EIVSELPAGTNW----NFDIHWYPKIPGVISASSFDGKIGIY 335 (719)
Q Consensus 291 iwd~~------~~---~~~~~l~~h~~~----v~~l~~spdg~~~las~s~Dg~I~iw 335 (719)
||.-. .. -.+..+.+|... |.++.|+|.. -+|++++.||+|++|
T Consensus 676 Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~q-pWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 676 VFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQ-PWLFSAGADGTIRLF 732 (733)
T ss_pred EEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCC-ceEEecCCCceEEee
Confidence 98432 22 245677788664 8999999998 588888889999998
No 150
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.87 E-value=2.9e-20 Score=196.68 Aligned_cols=344 Identities=15% Similarity=0.179 Sum_probs=245.4
Q ss_pred cccCccceEEEcCCCC---eEEEeeccceeecccCCCceEEEEEeeccCCcc---------------------cce----
Q 046451 5 KGINRSASVAFAPDAP---YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDR---------------------DLL---- 56 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~---~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~---------------------~~~---- 56 (719)
.|.+.|.+++|..-+. +||+++.|..||| |.+....... ++.
T Consensus 189 GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRi----------W~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is 258 (764)
T KOG1063|consen 189 GHTDWIRSLAFARLGGDDLLLASSSQDRYIRI----------WRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRIS 258 (764)
T ss_pred ccchhhhhhhhhccCCCcEEEEecCCceEEEE----------EEEEecCCccccccccccccccCCceeeeeeeEEEEEe
Confidence 3678999999998665 7888887777654 4443322110 000
Q ss_pred e-ecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCcee---eeccccCCEEEEEEe
Q 046451 57 L-VGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIA---HLSRHKGPVRGLEFN 132 (719)
Q Consensus 57 ~-~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~---~l~~h~~~V~~l~fs 132 (719)
+ .-..+|++.|+++.|++.+ ..|++++.|.++.+|..++ .++ .+.... .+.+..+...+.-|+
T Consensus 259 ~eall~GHeDWV~sv~W~p~~--------~~LLSASaDksmiiW~pd~----~tG-iWv~~vRlGe~gg~a~GF~g~lw~ 325 (764)
T KOG1063|consen 259 FEALLMGHEDWVYSVWWHPEG--------LDLLSASADKSMIIWKPDE----NTG-IWVDVVRLGEVGGSAGGFWGGLWS 325 (764)
T ss_pred hhhhhcCcccceEEEEEccch--------hhheecccCcceEEEecCC----ccc-eEEEEEEeecccccccceeeEEEc
Confidence 0 0123899999999999997 6899999999999999753 222 111111 222344567889999
Q ss_pred CCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC-CceeEE
Q 046451 133 SFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK-QKPVIS 211 (719)
Q Consensus 133 p~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~-~~~~~~ 211 (719)
+ +++.+++-+.-|..++|........ . ......+|.+.|.+++|+|.|+ +|++.+.|-+-++|---. ...-..
T Consensus 326 ~-n~~~ii~~g~~Gg~hlWkt~d~~~w-~---~~~~iSGH~~~V~dv~W~psGe-flLsvs~DQTTRlFa~wg~q~~wHE 399 (764)
T KOG1063|consen 326 P-NSNVIIAHGRTGGFHLWKTKDKTFW-T---QEPVISGHVDGVKDVDWDPSGE-FLLSVSLDQTTRLFARWGRQQEWHE 399 (764)
T ss_pred C-CCCEEEEecccCcEEEEeccCccce-e---eccccccccccceeeeecCCCC-EEEEeccccceeeecccccccceee
Confidence 9 7899999999999999993332221 1 3445678999999999999985 999999999999986541 111222
Q ss_pred ecC--CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC-------------------------------------
Q 046451 212 FSE--SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN------------------------------------- 252 (719)
Q Consensus 212 ~~~--~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~------------------------------------- 252 (719)
+.. -|...+.|++|-+. +..|++|.++. .+|+|+.-.
T Consensus 400 iaRPQiHGyDl~c~~~vn~-~~~FVSgAdEK---VlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~ 475 (764)
T KOG1063|consen 400 IARPQIHGYDLTCLSFVNE-DLQFVSGADEK---VLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFF 475 (764)
T ss_pred ecccccccccceeeehccC-Cceeeecccce---eeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCc
Confidence 221 58889999999985 46888888887 788886530
Q ss_pred ------CCC--------------------------------ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCC-----CcE
Q 046451 253 ------TMS--------------------------------PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD-----NRT 289 (719)
Q Consensus 253 ------~~~--------------------------------~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~D-----g~I 289 (719)
+.. .++.+.||...|++++.++ +++++++++.. ..|
T Consensus 476 ~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~-~gnliASaCKS~~~ehAvI 554 (764)
T KOG1063|consen 476 PGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISP-TGNLIASACKSSLKEHAVI 554 (764)
T ss_pred ccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecC-CCCEEeehhhhCCccceEE
Confidence 000 1223467889999999999 99999999864 369
Q ss_pred EEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCC--CCCCCCCccCcceecCCC-c
Q 046451 290 ICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGD--SNFSAAPLRAPKWYKRPA-G 366 (719)
Q Consensus 290 ~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~--~~~~~~~~~~p~w~~~~~-~ 366 (719)
++|+..+...+..+.+|.-.|+.+.||||| ++|++.+.|.++.+|+..........- ..-....+....|..... .
T Consensus 555 ~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg-~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~F 633 (764)
T KOG1063|consen 555 RLWNTANWLQVQELEGHSLTVTRLAFSPDG-RYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYF 633 (764)
T ss_pred EEEeccchhhhheecccceEEEEEEECCCC-cEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCccccee
Confidence 999999999999999999999999999999 899999999999999985544322110 011112234555666554 5
Q ss_pred eeeeeCCcEEEEccCCC
Q 046451 367 ASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 367 ~s~s~~Gklv~~~~~~~ 383 (719)
++.|.|.+++.|...+.
T Consensus 634 aTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 634 ATASRDKKVKVWEEPDL 650 (764)
T ss_pred EEecCCceEEEEeccCc
Confidence 67777777777776555
No 151
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.87 E-value=9.3e-21 Score=184.39 Aligned_cols=296 Identities=16% Similarity=0.211 Sum_probs=216.7
Q ss_pred ccCccceEEEcCC-----CCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCC
Q 046451 6 GINRSASVAFAPD-----APYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSE 80 (719)
Q Consensus 6 ~~~~V~~vafSpd-----g~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~ 80 (719)
+...|..++|+.- -..+|+.+. +.+.+|+.........+......++.+..+.++|+-+..++
T Consensus 37 ~~~~I~gv~fN~~~~~~e~~vfatvG~-----------~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~- 104 (385)
T KOG1034|consen 37 HNKPIFGVAFNSFLGCDEPQVFATVGG-----------NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTG- 104 (385)
T ss_pred CCCccceeeeehhcCCCCCceEEEeCC-----------cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCC-
Confidence 4457889999852 245666543 34466666544433444444445688889999998876421
Q ss_pred CCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCC
Q 046451 81 DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 81 ~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~ 160 (719)
.-+||.|+.-|.|+|.|+ .++ ++...+.+|...|+.|.|+|.+.++|++++.|..|++||+++..++.
T Consensus 105 ---~p~la~~G~~GvIrVid~------~~~---~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~ 172 (385)
T KOG1034|consen 105 ---NPFLAAGGYLGVIRVIDV------VSG---QCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVA 172 (385)
T ss_pred ---CeeEEeecceeEEEEEec------chh---hhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEE
Confidence 158899999999999999 556 88889999999999999999888999999999999999999998876
Q ss_pred ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce------e---------------------EEec
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP------V---------------------ISFS 213 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~------~---------------------~~~~ 213 (719)
.| +...+|.+.|.++.|+.+|. +|++++.|..|++|++...+. . .+-.
T Consensus 173 Vf----GG~egHrdeVLSvD~~~~gd-~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~ 247 (385)
T KOG1034|consen 173 VF----GGVEGHRDEVLSVDFSLDGD-RIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTT 247 (385)
T ss_pred Ee----cccccccCcEEEEEEcCCCC-eeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCcccccccccccc
Confidence 54 45677999999999999985 999999999999999973221 0 0011
Q ss_pred CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC-------------CceEEeeCCCCCeeEEE--eCCCCCC
Q 046451 214 ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM-------------SPVKEFVGHTKGVIAMS--WCPNDSS 278 (719)
Q Consensus 214 ~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~-------------~~~~~~~~h~~~V~~v~--~sp~d~~ 278 (719)
..|...|.|+.|--+ ++++-+.++ .|..|..-.-. ..+.++.-....|+-+. |.+ -.+
T Consensus 248 diHrnyVDCvrw~gd---~ilSkscen---aI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~-~~~ 320 (385)
T KOG1034|consen 248 DIHRNYVDCVRWFGD---FILSKSCEN---AIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDP-WQK 320 (385)
T ss_pred ccccchHHHHHHHhh---heeecccCc---eEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecH-HHH
Confidence 135666667777643 566666666 89999872111 12233333344555444 456 678
Q ss_pred eEEEEeCCCcEEEEECCCCeEE--EEec--CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 279 YLLTCAKDNRTICWDTVSGEIV--SELP--AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 279 ~l~sgs~Dg~I~iwd~~~~~~~--~~l~--~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
+|+.|...|.|.+||++..+.. .++. .....|...+|+.|+ .+|+..++|++|.-||.-
T Consensus 321 ~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dg-s~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 321 MLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDG-SILVLVCDDGTVWRWDRV 383 (385)
T ss_pred HHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccC-cEEEEEeCCCcEEEEEee
Confidence 9999999999999999876652 1121 223578999999999 788888889999999864
No 152
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.87 E-value=4.5e-21 Score=202.39 Aligned_cols=254 Identities=15% Similarity=0.207 Sum_probs=204.9
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
....+.+++.||||++||+|+.-|++ +||++...+.... ...|+.+|.|+.|+...-+. .
T Consensus 458 ~r~G~R~~~vSp~gqhLAsGDr~Gnl----------rVy~Lq~l~~~~~-----~eAHesEilcLeyS~p~~~~-----k 517 (1080)
T KOG1408|consen 458 SRFGFRALAVSPDGQHLASGDRGGNL----------RVYDLQELEYTCF-----MEAHESEILCLEYSFPVLTN-----K 517 (1080)
T ss_pred cccceEEEEECCCcceecccCccCce----------EEEEehhhhhhhh-----eecccceeEEEeecCchhhh-----H
Confidence 34678999999999999999877765 8899885443322 24599999999998754333 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCC-CEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTP-NLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~-~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
+||+++.|..|.|||+.. + +..+.++.+|...|+++.|...+. ..+++++.|..|.+--.........|
T Consensus 518 LLASasrdRlIHV~Dv~r-----n---y~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f-- 587 (1080)
T KOG1408|consen 518 LLASASRDRLIHVYDVKR-----N---YDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLF-- 587 (1080)
T ss_pred hhhhccCCceEEEEeccc-----c---cchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceec--
Confidence 999999999999999842 2 377889999999999999987332 57889999988775433322222222
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC--CCCCceeEEEECCCCCcEEEEEeCCCCC
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE--SIKRRCSVLQWNPDVATQLVVASDEDSS 242 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~--~~~~~i~~l~~sp~g~~~l~~~s~d~~~ 242 (719)
.+.+....+..+++++..|.- .++++++.|..|+|||+.+++..+.|.. .+.+....+...|.| .++++...|.
T Consensus 588 ~r~t~t~~ktTlYDm~Vdp~~-k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSg-iY~atScsdk-- 663 (1080)
T KOG1408|consen 588 PRHTQTLSKTTLYDMAVDPTS-KLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSG-IYLATSCSDK-- 663 (1080)
T ss_pred cccccccccceEEEeeeCCCc-ceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCc-cEEEEeecCC--
Confidence 333333345689999999985 6999999999999999999999999986 456778889999998 5788888887
Q ss_pred CcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC
Q 046451 243 PALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 243 ~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~ 296 (719)
+|.++|.-++ +++....||...|+.+.|.+ |-+.|++.+.||.|.||.+..
T Consensus 664 -tl~~~Df~sg-EcvA~m~GHsE~VTG~kF~n-DCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 664 -TLCFVDFVSG-ECVAQMTGHSEAVTGVKFLN-DCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred -ceEEEEeccc-hhhhhhcCcchheeeeeecc-cchhheeecCCceEEEEECch
Confidence 8999999875 88899999999999999999 999999999999999999854
No 153
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.87 E-value=1.6e-19 Score=184.49 Aligned_cols=352 Identities=15% Similarity=0.219 Sum_probs=250.2
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
+.|.+.|.|++.+||--.+|+|-..|.- -......++|||...-. ++.+++ .....|.|++|++...+.
T Consensus 101 ~GH~ddikc~~vHPdri~vatGQ~ag~~--g~~~~phvriWdsv~L~---TL~V~g--~f~~GV~~vaFsk~~~G~---- 169 (626)
T KOG2106|consen 101 LGHNDDIKCMAVHPDRIRVATGQGAGTS--GRPLQPHVRIWDSVTLS---TLHVIG--FFDRGVTCVAFSKINGGS---- 169 (626)
T ss_pred cCCCCceEEEeecCCceeeccCcccccC--CCcCCCeeeecccccce---eeeeec--cccccceeeeecccCCCc----
Confidence 4577889999999999999988666631 11234567999965322 333344 456789999999876432
Q ss_pred cceEEEE--cCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCc
Q 046451 84 LGLVAGG--LVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSH 161 (719)
Q Consensus 84 ~~~lasg--s~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~ 161 (719)
+|+.- +.+..+.+||.. .+ ......+..++.|....|+|.+.+++++++. |.+.+|+++.+...+.
T Consensus 170 --~l~~vD~s~~h~lSVWdWq------k~---~~~~~vk~sne~v~~a~FHPtd~nliit~Gk-~H~~Fw~~~~~~l~k~ 237 (626)
T KOG2106|consen 170 --LLCAVDDSNPHMLSVWDWQ------KK---AKLGPVKTSNEVVFLATFHPTDPNLIITCGK-GHLYFWTLRGGSLVKR 237 (626)
T ss_pred --eEEEecCCCccccchhhch------hh---hccCcceeccceEEEEEeccCCCcEEEEeCC-ceEEEEEccCCceEEE
Confidence 44443 345568899983 33 4444455567889999999988888888775 8999999998776554
Q ss_pred cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCC
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~ 241 (719)
...++... +..|.|++|.++|+ +++|.++|.|.||+..+.+...... .|.+.|.+++.-.+| .|++|+.|.
T Consensus 238 ~~~fek~e---kk~Vl~v~F~engd--viTgDS~G~i~Iw~~~~~~~~k~~~-aH~ggv~~L~~lr~G--tllSGgKDR- 308 (626)
T KOG2106|consen 238 QGIFEKRE---KKFVLCVTFLENGD--VITGDSGGNILIWSKGTNRISKQVH-AHDGGVFSLCMLRDG--TLLSGGKDR- 308 (626)
T ss_pred eecccccc---ceEEEEEEEcCCCC--EEeecCCceEEEEeCCCceEEeEee-ecCCceEEEEEecCc--cEeecCccc-
Confidence 33343322 35899999999985 8899999999999998888777777 899999999999998 366688887
Q ss_pred CCcEEEEecCCCC----------Cce-----------------------------EEeeCCCCCeeEEEeCCCCCCeEEE
Q 046451 242 SPALRLWDMRNTM----------SPV-----------------------------KEFVGHTKGVIAMSWCPNDSSYLLT 282 (719)
Q Consensus 242 ~~~I~lwDl~~~~----------~~~-----------------------------~~~~~h~~~V~~v~~sp~d~~~l~s 282 (719)
.|..||-.-.. -.+ .+..+|......++.+| +.+.|++
T Consensus 309 --ki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hp-s~~q~~T 385 (626)
T KOG2106|consen 309 --KIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHP-SKNQLLT 385 (626)
T ss_pred --eEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCC-Chhheee
Confidence 89999832100 000 12245778888999999 8899999
Q ss_pred EeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceec
Q 046451 283 CAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYK 362 (719)
Q Consensus 283 gs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~ 362 (719)
++.|+.+++|+ ..+.+.+... ...+.++.|+|.| .||.|...|...+.|.++...+..-.+ ..++.
T Consensus 386 ~gqdk~v~lW~--~~k~~wt~~~-~d~~~~~~fhpsg--~va~Gt~~G~w~V~d~e~~~lv~~~~d---~~~ls------ 451 (626)
T KOG2106|consen 386 CGQDKHVRLWN--DHKLEWTKII-EDPAECADFHPSG--VVAVGTATGRWFVLDTETQDLVTIHTD---NEQLS------ 451 (626)
T ss_pred ccCcceEEEcc--CCceeEEEEe-cCceeEeeccCcc--eEEEeeccceEEEEecccceeEEEEec---CCceE------
Confidence 99999999999 4444444332 3458899999998 899999999999999999776652221 22222
Q ss_pred CCCceeeeeCCcEEEEccCCCC----------Cc--cccccccccceeeccCCCCCC
Q 046451 363 RPAGASFGFGGKLVSFHPKSSA----------GH--TSENSQHAPVHGVDQSKYGMV 407 (719)
Q Consensus 363 ~~~~~s~s~~Gklv~~~~~~~~----------~~--~~~~~~~~~v~~v~~s~~~~~ 407 (719)
.+.|+.+|..++.+..+.. -+ +--..|-+.++-.|+|.|++=
T Consensus 452 ---~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~ 505 (626)
T KOG2106|consen 452 ---VVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQF 505 (626)
T ss_pred ---EEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCce
Confidence 3455555655555544442 11 111223366777999999665
No 154
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.87 E-value=1.4e-19 Score=189.33 Aligned_cols=287 Identities=10% Similarity=0.077 Sum_probs=189.9
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE-EEEeCCCcEEEEcCCCCCCCCccC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL-ASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l-asgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
.++++++.|+.|++||+ .++ +.+..+..+. .+.+++|++ +++.+ ++++.++.|++||+.+++....+
T Consensus 2 ~~~~s~~~d~~v~~~d~------~t~---~~~~~~~~~~-~~~~l~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~- 69 (300)
T TIGR03866 2 KAYVSNEKDNTISVIDT------ATL---EVTRTFPVGQ-RPRGITLSK-DGKLLYVCASDSDTIQVIDLATGEVIGTL- 69 (300)
T ss_pred cEEEEecCCCEEEEEEC------CCC---ceEEEEECCC-CCCceEECC-CCCEEEEEECCCCeEEEEECCCCcEEEec-
Confidence 58899999999999998 444 5666666554 467899999 66655 67788999999999887654332
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~ 243 (719)
.. + ..+..++|++++..++++++.++.|++||+++.+.+..+. ....+.+++|++++. +++++..++.
T Consensus 70 --~~----~-~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~--~~~~~~~~~~~~dg~-~l~~~~~~~~-- 137 (300)
T TIGR03866 70 --PS----G-PDPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIP--VGVEPEGMAVSPDGK-IVVNTSETTN-- 137 (300)
T ss_pred --cC----C-CCccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEee--CCCCcceEEECCCCC-EEEEEecCCC--
Confidence 11 1 2356789999986455566678999999999988777775 344578899999985 5666555431
Q ss_pred cEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEE-EEeCCCcEEEEECCCCeEEEEecCCC-------CCeEEeEE
Q 046451 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLL-TCAKDNRTICWDTVSGEIVSELPAGT-------NWNFDIHW 315 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~-sgs~Dg~I~iwd~~~~~~~~~l~~h~-------~~v~~l~~ 315 (719)
.+.+||.++. +.+..+. ......+++|++ ++.+|+ ++..++.|++||+.+++.+..+..+. .....++|
T Consensus 138 ~~~~~d~~~~-~~~~~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 214 (300)
T TIGR03866 138 MAHFIDTKTY-EIVDNVL-VDQRPRFAEFTA-DGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKL 214 (300)
T ss_pred eEEEEeCCCC-eEEEEEE-cCCCccEEEECC-CCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEE
Confidence 5778898764 3333332 233567899999 777775 44569999999999998877664321 12356899
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceee--eeCCcEEEEccCCCCCcccccccc
Q 046451 316 YPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASF--GFGGKLVSFHPKSSAGHTSENSQH 393 (719)
Q Consensus 316 spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~--s~~Gklv~~~~~~~~~~~~~~~~~ 393 (719)
++++..++++.+.++.|.+||+++++........ .......|......+.. +.+|++..|+.++....+.+....
T Consensus 215 s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~---~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~~ 291 (300)
T TIGR03866 215 TKDGKTAFVALGPANRVAVVDAKTYEVLDYLLVG---QRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVGR 291 (300)
T ss_pred CCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEeC---CCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEccc
Confidence 9999544555566778999999988765421111 11123334443333222 235566666666555544444332
Q ss_pred ccceeeccC
Q 046451 394 APVHGVDQS 402 (719)
Q Consensus 394 ~~v~~v~~s 402 (719)
+ ..+++++
T Consensus 292 ~-~~~~~~~ 299 (300)
T TIGR03866 292 L-PWGVVVR 299 (300)
T ss_pred c-cceeEeC
Confidence 2 2445444
No 155
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.87 E-value=4.6e-20 Score=178.17 Aligned_cols=287 Identities=17% Similarity=0.234 Sum_probs=203.8
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCccccee-ecccCCCCCceeeeecCCCCCCCCCc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLL-VGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~-~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
.|.+-|.|+.|...|+++|+|+.|+.| +|||.+.... .+.+ ..-..|.+.|..|.|.+-.-+
T Consensus 11 ~h~DlihdVs~D~~GRRmAtCSsDq~v----------kI~d~~~~s~--~W~~Ts~Wrah~~Si~rV~WAhPEfG----- 73 (361)
T KOG2445|consen 11 GHKDLIHDVSFDFYGRRMATCSSDQTV----------KIWDSTSDSG--TWSCTSSWRAHDGSIWRVVWAHPEFG----- 73 (361)
T ss_pred CCcceeeeeeecccCceeeeccCCCcE----------EEEeccCCCC--ceEEeeeEEecCCcEEEEEecCcccc-----
Confidence 356779999999999999999887776 8888643322 2222 222458999999999764311
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC-CCEEEEEeCCCcEEEEcCCCCCCCCcc
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT-PNLLASGADDGEICIWDLSAPAEPSHF 162 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~-~~~lasgs~dg~I~iwdl~~~~~~~~~ 162 (719)
+.+|+++.|+++.||.-........+..+....++......|++++|.|.. +-.||+++.||.|+||+.-........
T Consensus 74 -qvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W 152 (361)
T KOG2445|consen 74 -QVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQW 152 (361)
T ss_pred -ceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccc
Confidence 799999999999999864222223333456667788889999999999843 457999999999999987654433221
Q ss_pred ------CCccCCCCCCCCCeEEEEecCCC--CcEEEEEeCC-----CcEEEEECCCCc----eeEEecCCCCCceeEEEE
Q 046451 163 ------PPLRGNGSAAQGEISFVSWNSKV--QHILASTSYN-----GTTVVWDLKKQK----PVISFSESIKRRCSVLQW 225 (719)
Q Consensus 163 ------~~l~~~~~~h~~~I~~l~~sp~g--~~~l~s~s~d-----g~I~iwd~~~~~----~~~~~~~~~~~~i~~l~~ 225 (719)
..+......+.....|+.|++.. ..+|++|+.+ +.++||....+. .+.++. .+...|+.|+|
T Consensus 153 ~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~-d~~dpI~di~w 231 (361)
T KOG2445|consen 153 TLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELP-DHTDPIRDISW 231 (361)
T ss_pred hhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcC-CCCCcceeeee
Confidence 11111222456678899998642 2467777766 578888765432 344555 79999999999
Q ss_pred CCCC---CcEEEEEeCCCCCCcEEEEecCCCC-------------------CceEEeeCCCCCeeEEEeCCCCCCeEEEE
Q 046451 226 NPDV---ATQLVVASDEDSSPALRLWDMRNTM-------------------SPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283 (719)
Q Consensus 226 sp~g---~~~l~~~s~d~~~~~I~lwDl~~~~-------------------~~~~~~~~h~~~V~~v~~sp~d~~~l~sg 283 (719)
.|+- -++|++++.|| |+||.++... +.+..+.+|.+.|..+.|+- .|..|.+.
T Consensus 232 APn~Gr~y~~lAvA~kDg----v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNm-tGtiLsSt 306 (361)
T KOG2445|consen 232 APNIGRSYHLLAVATKDG----VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNM-TGTILSST 306 (361)
T ss_pred ccccCCceeeEEEeecCc----EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEee-eeeEEeec
Confidence 9974 24688888886 9999987311 12445778999999999998 89999999
Q ss_pred eCCCcEEEEECC---CCeEEEEecCCCCCeEEeEEc
Q 046451 284 AKDNRTICWDTV---SGEIVSELPAGTNWNFDIHWY 316 (719)
Q Consensus 284 s~Dg~I~iwd~~---~~~~~~~l~~h~~~v~~l~~s 316 (719)
|.||+||+|... ..++...++.... +....|+
T Consensus 307 GdDG~VRLWkany~n~~kC~sv~~~e~~-~~~~~~~ 341 (361)
T KOG2445|consen 307 GDDGCVRLWKANYNNLWKCTSVLKAEGS-VTKPDFS 341 (361)
T ss_pred CCCceeeehhhhhhhhheeeeEEeccCC-CCCcccc
Confidence 999999999754 2345555544322 4444444
No 156
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=4.9e-20 Score=187.27 Aligned_cols=233 Identities=18% Similarity=0.262 Sum_probs=188.0
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
++++-.....|.+|.+.+. ........-.+.|.++.-++ ++.+|+.|+..|.|++|.+.++..+..+
T Consensus 53 llsaq~~rp~l~vw~i~k~---------~~~~q~~v~Pg~v~al~s~n-~G~~l~ag~i~g~lYlWelssG~LL~v~--- 119 (476)
T KOG0646|consen 53 LLSAQLKRPLLHVWEILKK---------DQVVQYIVLPGPVHALASSN-LGYFLLAGTISGNLYLWELSSGILLNVL--- 119 (476)
T ss_pred eeeecccCccccccccCch---------hhhhhhcccccceeeeecCC-CceEEEeecccCcEEEEEeccccHHHHH---
Confidence 3444444568999998431 11222233567899999999 8899999989999999999999876542
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC---------CCceeEEecCCCCCceeEEEECCCC-CcEEEE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---------KQKPVISFSESIKRRCSVLQWNPDV-ATQLVV 235 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~---------~~~~~~~~~~~~~~~i~~l~~sp~g-~~~l~~ 235 (719)
.+|-..|+|+.|+.|| .+|++|+.||.|.+|++. +-+++..|. .|.-.|+++.....| ...+++
T Consensus 120 ----~aHYQ~ITcL~fs~dg-s~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~-~HtlsITDl~ig~Gg~~~rl~T 193 (476)
T KOG0646|consen 120 ----SAHYQSITCLKFSDDG-SHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFS-DHTLSITDLQIGSGGTNARLYT 193 (476)
T ss_pred ----HhhccceeEEEEeCCC-cEEEecCCCccEEEEEEEeecccccCCCccceeeec-cCcceeEEEEecCCCccceEEE
Confidence 4577799999999998 599999999999999874 235667777 899999999988764 457899
Q ss_pred EeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC----------------CeE
Q 046451 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS----------------GEI 299 (719)
Q Consensus 236 ~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~----------------~~~ 299 (719)
++.|. ++++||+..+ ..+.++. ....+.+++.+| .++.+++|+.+|.|.+.++.. +..
T Consensus 194 aS~D~---t~k~wdlS~g-~LLlti~-fp~si~av~lDp-ae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~ 267 (476)
T KOG0646|consen 194 ASEDR---TIKLWDLSLG-VLLLTIT-FPSSIKAVALDP-AERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQ 267 (476)
T ss_pred ecCCc---eEEEEEeccc-eeeEEEe-cCCcceeEEEcc-cccEEEecCCcceEEeeehhcCCcccccccccccccccce
Confidence 99998 9999999775 4444443 456899999999 889999999999999887753 234
Q ss_pred EEEecCCCC--CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 300 VSELPAGTN--WNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 300 ~~~l~~h~~--~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+..+.+|.+ .|++++.+-|| .+|++|+.||+|+|||+.+.+++.
T Consensus 268 ~~~~~Gh~~~~~ITcLais~Dg-tlLlSGd~dg~VcvWdi~S~Q~iR 313 (476)
T KOG0646|consen 268 INVLVGHENESAITCLAISTDG-TLLLSGDEDGKVCVWDIYSKQCIR 313 (476)
T ss_pred eeeeccccCCcceeEEEEecCc-cEEEeeCCCCCEEEEecchHHHHH
Confidence 566778888 99999999999 899999999999999999998876
No 157
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.86 E-value=8.4e-20 Score=193.19 Aligned_cols=304 Identities=17% Similarity=0.226 Sum_probs=230.5
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeeccc-CCCCCceeeeecCCCCCCCCC
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGES-PSSERFNRLAWGKNGSGSEDF 82 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~-~~~~~V~~l~~sp~g~~~~~~ 82 (719)
+.|.+.|+++.|+|++..|.+++.|.++.+|-..+++ -||--.. . ++.. +....+.+.-|++++
T Consensus 264 ~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~t-GiWv~~v-------R-lGe~gg~a~GF~g~lw~~n~------ 328 (764)
T KOG1063|consen 264 MGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENT-GIWVDVV-------R-LGEVGGSAGGFWGGLWSPNS------ 328 (764)
T ss_pred cCcccceEEEEEccchhhheecccCcceEEEecCCcc-ceEEEEE-------E-eecccccccceeeEEEcCCC------
Confidence 4688999999999999999999988887665433332 2332221 1 1112 345678999999998
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCC-CCCCc
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAP-AEPSH 161 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~-~~~~~ 161 (719)
+.|++-+..|..++|.. .+...+.....+.+|.+.|.+++|+| .+.+|++.+.|.+-|+|---.. .....
T Consensus 329 --~~ii~~g~~Gg~hlWkt------~d~~~w~~~~~iSGH~~~V~dv~W~p-sGeflLsvs~DQTTRlFa~wg~q~~wHE 399 (764)
T KOG1063|consen 329 --NVIIAHGRTGGFHLWKT------KDKTFWTQEPVISGHVDGVKDVDWDP-SGEFLLSVSLDQTTRLFARWGRQQEWHE 399 (764)
T ss_pred --CEEEEecccCcEEEEec------cCccceeeccccccccccceeeeecC-CCCEEEEeccccceeeecccccccceee
Confidence 78999999999999994 33333355567789999999999999 8899999999999999875521 22222
Q ss_pred cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC------------------------------------
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK------------------------------------ 205 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~------------------------------------ 205 (719)
+ ....-|...++|++|-+. ...|++|.+...+++|+...
T Consensus 400 i----aRPQiHGyDl~c~~~vn~-~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~ 474 (764)
T KOG1063|consen 400 I----ARPQIHGYDLTCLSFVNE-DLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAF 474 (764)
T ss_pred e----cccccccccceeeehccC-CceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCC
Confidence 2 112336668999999875 36889999999999998610
Q ss_pred -------Cce---------------------------------eEEecCCCCCceeEEEECCCCCcEEEEEeCCCC--CC
Q 046451 206 -------QKP---------------------------------VISFSESIKRRCSVLQWNPDVATQLVVASDEDS--SP 243 (719)
Q Consensus 206 -------~~~---------------------------------~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~--~~ 243 (719)
+.. +..+. +|...|++++.++++ ++++++..... ..
T Consensus 475 ~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLY-GHGyEv~~l~~s~~g-nliASaCKS~~~ehA 552 (764)
T KOG1063|consen 475 FPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLY-GHGYEVYALAISPTG-NLIASACKSSLKEHA 552 (764)
T ss_pred cccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhc-cCceeEEEEEecCCC-CEEeehhhhCCccce
Confidence 000 01111 688899999999998 57887765442 23
Q ss_pred cEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe----EEEEecCCCCCeEEeEEcCCC
Q 046451 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE----IVSELPAGTNWNFDIHWYPKI 319 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~----~~~~l~~h~~~v~~l~~spdg 319 (719)
.|+||+..+. ..+..+.+|+-.|+.++||| |+++|++.+.|.++.+|...... ....++.|..-|+++.|+|++
T Consensus 553 vI~lw~t~~W-~~~~~L~~HsLTVT~l~FSp-dg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde 630 (764)
T KOG1063|consen 553 VIRLWNTANW-LQVQELEGHSLTVTRLAFSP-DGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDE 630 (764)
T ss_pred EEEEEeccch-hhhheecccceEEEEEEECC-CCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCccc
Confidence 6999998764 55668999999999999999 99999999999999999875432 233367899999999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCc
Q 046451 320 PGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 320 ~~~las~s~Dg~I~iwd~~~~~ 341 (719)
..++|+|.|++|+||......
T Consensus 631 -~~FaTaSRDK~VkVW~~~~~~ 651 (764)
T KOG1063|consen 631 -KYFATASRDKKVKVWEEPDLR 651 (764)
T ss_pred -ceeEEecCCceEEEEeccCch
Confidence 789999999999999999883
No 158
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.85 E-value=9.3e-20 Score=184.68 Aligned_cols=285 Identities=14% Similarity=0.223 Sum_probs=221.9
Q ss_pred CCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCC-EEE
Q 046451 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN-LLA 140 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~-~la 140 (719)
...+.|++|.|+|.. .+|++++.||.++||.++. +.. ..+..+.-...+|.+.+|.+ ++. .++
T Consensus 211 ps~~~I~sv~FHp~~--------plllvaG~d~~lrifqvDG----k~N---~~lqS~~l~~fPi~~a~f~p-~G~~~i~ 274 (514)
T KOG2055|consen 211 PSHGGITSVQFHPTA--------PLLLVAGLDGTLRIFQVDG----KVN---PKLQSIHLEKFPIQKAEFAP-NGHSVIF 274 (514)
T ss_pred cCcCCceEEEecCCC--------ceEEEecCCCcEEEEEecC----ccC---hhheeeeeccCccceeeecC-CCceEEE
Confidence 356789999999987 7999999999999999853 222 67777777888999999999 555 999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
+++....++.||+.+.+.... ..+.+. ....+.....++++ ++|+..+..|.|.+....+++.+.++. ..+.|
T Consensus 275 ~s~rrky~ysyDle~ak~~k~-~~~~g~---e~~~~e~FeVShd~-~fia~~G~~G~I~lLhakT~eli~s~K--ieG~v 347 (514)
T KOG2055|consen 275 TSGRRKYLYSYDLETAKVTKL-KPPYGV---EEKSMERFEVSHDS-NFIAIAGNNGHIHLLHAKTKELITSFK--IEGVV 347 (514)
T ss_pred ecccceEEEEeeccccccccc-cCCCCc---ccchhheeEecCCC-CeEEEcccCceEEeehhhhhhhhheee--eccEE
Confidence 999999999999988765432 212221 23467788889997 599999999999999999999999998 88999
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCC-CCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC---
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHT-KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS--- 296 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~-~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~--- 296 (719)
..++|+.|++. |++++.+| .|++||++.. .+++.+.... -.-+++|.+. ++.+||+|+..|.|.|||.++
T Consensus 348 ~~~~fsSdsk~-l~~~~~~G---eV~v~nl~~~-~~~~rf~D~G~v~gts~~~S~-ng~ylA~GS~~GiVNIYd~~s~~~ 421 (514)
T KOG2055|consen 348 SDFTFSSDSKE-LLASGGTG---EVYVWNLRQN-SCLHRFVDDGSVHGTSLCISL-NGSYLATGSDSGIVNIYDGNSCFA 421 (514)
T ss_pred eeEEEecCCcE-EEEEcCCc---eEEEEecCCc-ceEEEEeecCccceeeeeecC-CCceEEeccCcceEEEeccchhhc
Confidence 99999999965 55555555 7999999875 6777765432 2335677778 889999999999999999754
Q ss_pred ---CeEEEEecCCCCCeEEeEEcCCCCCEEEEEeC--CCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeee
Q 046451 297 ---GEIVSELPAGTNWNFDIHWYPKIPGVISASSF--DGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGF 371 (719)
Q Consensus 297 ---~~~~~~l~~h~~~v~~l~~spdg~~~las~s~--Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~ 371 (719)
-+.+..+..-...|+++.|++|. .+||.+|. +..+++-.+.+...+...... .. =+...+.+.||+
T Consensus 422 s~~PkPik~~dNLtt~Itsl~Fn~d~-qiLAiaS~~~knalrLVHvPS~TVFsNfP~~------n~--~vg~vtc~aFSP 492 (514)
T KOG2055|consen 422 STNPKPIKTVDNLTTAITSLQFNHDA-QILAIASRVKKNALRLVHVPSCTVFSNFPTS------NT--KVGHVTCMAFSP 492 (514)
T ss_pred cCCCCchhhhhhhheeeeeeeeCcch-hhhhhhhhccccceEEEeccceeeeccCCCC------CC--cccceEEEEecC
Confidence 35667777677789999999999 78877664 678999999998876521111 00 122346789999
Q ss_pred CCcEEEEccCCCC
Q 046451 372 GGKLVSFHPKSSA 384 (719)
Q Consensus 372 ~Gklv~~~~~~~~ 384 (719)
.|-++++++..+.
T Consensus 493 ~sG~lAvGNe~gr 505 (514)
T KOG2055|consen 493 NSGYLAVGNEAGR 505 (514)
T ss_pred CCceEEeecCCCc
Confidence 9999999987764
No 159
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.85 E-value=6.6e-20 Score=175.40 Aligned_cols=275 Identities=23% Similarity=0.412 Sum_probs=198.3
Q ss_pred CCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC-------CcEEEEcCCCCCCCCccCC
Q 046451 92 VDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD-------GEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 92 ~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d-------g~I~iwdl~~~~~~~~~~~ 164 (719)
.|+.|.+.+++. +...-..+.|..|.+.|+.|+-+|.+.++|+++..+ -.+-||.+...........
T Consensus 38 ~dNqVhll~~d~------e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~t 111 (370)
T KOG1007|consen 38 EDNQVHLLRLDS------EGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSST 111 (370)
T ss_pred CcceeEEEEecC------ccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccch
Confidence 367888888842 323344566778899999999999999999998764 2467999876654433222
Q ss_pred ccC---CCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce-eEEecC----CCCCceeEEEECCC-CCcEEEE
Q 046451 165 LRG---NGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP-VISFSE----SIKRRCSVLQWNPD-VATQLVV 235 (719)
Q Consensus 165 l~~---~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~-~~~~~~----~~~~~i~~l~~sp~-g~~~l~~ 235 (719)
+.. ....+-+.|.|+.|.|++. .|++-. |..|.+|++..+.. +..+.. .+....++-+|+|. ..+.+++
T Consensus 112 lE~v~~Ldteavg~i~cvew~Pns~-klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~t 189 (370)
T KOG1007|consen 112 LECVASLDTEAVGKINCVEWEPNSD-KLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVAT 189 (370)
T ss_pred hhHhhcCCHHHhCceeeEEEcCCCC-eeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEE
Confidence 221 1123445899999999864 555544 78899999988765 322221 34567788899983 2245555
Q ss_pred EeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC-CeEEEEecCCCCCeEEeE
Q 046451 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS-GEIVSELPAGTNWNFDIH 314 (719)
Q Consensus 236 ~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~-~~~~~~l~~h~~~v~~l~ 314 (719)
.++. +++.||+|+..+....-..|...|.++.|+|+...+|++|++||.|+|||++. ...+.++.+|..||+++.
T Consensus 190 t~d~----tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VR 265 (370)
T KOG1007|consen 190 TSDS----TLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVR 265 (370)
T ss_pred eCCC----cEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEE
Confidence 5544 79999999876655566789899999999997777899999999999999985 567999999999999999
Q ss_pred EcCCCCCEEEEEeCCCcEEEEeCCCCcccc-----cCCCC------------CCCC----------CccCcceecCC--C
Q 046451 315 WYPKIPGVISASSFDGKIGIYNIEGCSRYG-----VGDSN------------FSAA----------PLRAPKWYKRP--A 365 (719)
Q Consensus 315 ~spdg~~~las~s~Dg~I~iwd~~~~~~~~-----~~~~~------------~~~~----------~~~~p~w~~~~--~ 365 (719)
|++.-..+|.+++.|..|.+|....-.... .-+.. +.++ .+++..|.... .
T Consensus 266 fn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWi 345 (370)
T KOG1007|consen 266 FNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWI 345 (370)
T ss_pred ecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCee
Confidence 999888899999999999999876544211 00000 1111 12566676654 5
Q ss_pred ceeeeeCCcEEEE
Q 046451 366 GASFGFGGKLVSF 378 (719)
Q Consensus 366 ~~s~s~~Gklv~~ 378 (719)
.++.+.||++++-
T Consensus 346 FASLSYDGRviIs 358 (370)
T KOG1007|consen 346 FASLSYDGRVIIS 358 (370)
T ss_pred EEEeccCceEEee
Confidence 6788999998763
No 160
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.85 E-value=1.2e-19 Score=175.55 Aligned_cols=286 Identities=14% Similarity=0.149 Sum_probs=205.5
Q ss_pred CCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEE
Q 046451 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLAS 141 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~las 141 (719)
.+.. .+|+.|++.| .+||+|+.||.|.|||+ .+. ..-+.+.+|..+|.+++|++ +++.|++
T Consensus 22 d~~~-a~~~~Fs~~G--------~~lAvGc~nG~vvI~D~------~T~---~iar~lsaH~~pi~sl~WS~-dgr~Llt 82 (405)
T KOG1273|consen 22 DNPL-AECCQFSRWG--------DYLAVGCANGRVVIYDF------DTF---RIARMLSAHVRPITSLCWSR-DGRKLLT 82 (405)
T ss_pred cCCc-cceEEeccCc--------ceeeeeccCCcEEEEEc------ccc---chhhhhhccccceeEEEecC-CCCEeee
Confidence 3444 7899999999 79999999999999999 444 56677889999999999999 8999999
Q ss_pred EeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeE-EecC--CCCC
Q 046451 142 GADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVI-SFSE--SIKR 218 (719)
Q Consensus 142 gs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~-~~~~--~~~~ 218 (719)
++.|..|.+||+..+.....+ ...+.|+.+.|+|...+.++++-.+..-.+.++...+... .... ....
T Consensus 83 sS~D~si~lwDl~~gs~l~ri--------rf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~ 154 (405)
T KOG1273|consen 83 SSRDWSIKLWDLLKGSPLKRI--------RFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNS 154 (405)
T ss_pred ecCCceeEEEeccCCCceeEE--------EccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCcccccc
Confidence 999999999999999876553 2456899999999888887777766666666666532211 1110 1112
Q ss_pred ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCC-CCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC-
Q 046451 219 RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHT-KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS- 296 (719)
Q Consensus 219 ~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~-~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~- 296 (719)
.-.+..|++.| .++++|...| .+.+||..+. +++..++... ..|..+.|+. .+++|++-+.|..||.|+++.
T Consensus 155 sas~~~fdr~g-~yIitGtsKG---kllv~~a~t~-e~vas~rits~~~IK~I~~s~-~g~~liiNtsDRvIR~ye~~di 228 (405)
T KOG1273|consen 155 SASHGVFDRRG-KYIITGTSKG---KLLVYDAETL-ECVASFRITSVQAIKQIIVSR-KGRFLIINTSDRVIRTYEISDI 228 (405)
T ss_pred ccccccccCCC-CEEEEecCcc---eEEEEecchh-eeeeeeeechheeeeEEEEec-cCcEEEEecCCceEEEEehhhh
Confidence 22334588888 4788888887 8999999875 6677666555 7888999998 999999999999999999862
Q ss_pred ------CeE--EEEecC--CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCc
Q 046451 297 ------GEI--VSELPA--GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAG 366 (719)
Q Consensus 297 ------~~~--~~~l~~--h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~ 366 (719)
++. .+++.. ..-.-.+++|+.+|.+++++......++||.-..|.++...+..-+.. +....|......
T Consensus 229 ~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~-l~DV~whp~rp~ 307 (405)
T KOG1273|consen 229 DDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEE-LLDVNWHPVRPI 307 (405)
T ss_pred cccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhh-eeecccccceee
Confidence 111 122211 111235789999996666666667899999999999987444332211 122347654333
Q ss_pred eeeeeCCcEEEEccC
Q 046451 367 ASFGFGGKLVSFHPK 381 (719)
Q Consensus 367 ~s~s~~Gklv~~~~~ 381 (719)
+..-..|.+..|.-.
T Consensus 308 i~si~sg~v~iw~~~ 322 (405)
T KOG1273|consen 308 IASIASGVVYIWAVV 322 (405)
T ss_pred eeeccCCceEEEEee
Confidence 333356666666543
No 161
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.84 E-value=1.9e-19 Score=179.92 Aligned_cols=308 Identities=18% Similarity=0.218 Sum_probs=222.6
Q ss_pred ccCccceEEEcCCCC-eEEEeeccceeecccCCCceEEEEEeeccCCcc---ccee-ecccCCCCCceeeeecCCCCCCC
Q 046451 6 GINRSASVAFAPDAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDR---DLLL-VGESPSSERFNRLAWGKNGSGSE 80 (719)
Q Consensus 6 ~~~~V~~vafSpdg~-~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~---~~~~-~~~~~~~~~V~~l~~sp~g~~~~ 80 (719)
....|.++.|..+.. .||+|+.|..| +||.++...... .+.. .....|...|+++.|+++|
T Consensus 12 ~~~pv~s~dfq~n~~~~laT~G~D~~i----------riW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~g---- 77 (434)
T KOG1009|consen 12 DHEPVYSVDFQKNSLNKLATAGGDKDI----------RIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDG---- 77 (434)
T ss_pred CCCceEEEEeccCcccceecccCccce----------eeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCc----
Confidence 446788999999876 99999877666 788887665544 2333 3345689999999999999
Q ss_pred CCccceEEEEcCCCcEEEEcCCcccc-------CCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcC
Q 046451 81 DFSLGLVAGGLVDGSIDIWNPLSLIS-------SGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDL 153 (719)
Q Consensus 81 ~~~~~~lasgs~dg~I~lwd~~~~~~-------~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl 153 (719)
.+|++|+.+|.|.+|....... ......+...+.+.+|...|..++|++ +++++++++.|..+++||+
T Consensus 78 ----elLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~-d~~~l~s~s~dns~~l~Dv 152 (434)
T KOG1009|consen 78 ----ELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSP-DSNFLVSGSVDNSVRLWDV 152 (434)
T ss_pred ----CeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccC-CCceeeeeeccceEEEEEe
Confidence 7999999999999998651100 001112355567888999999999999 8899999999999999999
Q ss_pred CCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec--------------------
Q 046451 154 SAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS-------------------- 213 (719)
Q Consensus 154 ~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~-------------------- 213 (719)
..+..... ...|...+..++|.+.+ .++++-+.|...+++.+...+.+....
T Consensus 153 ~~G~l~~~-------~~dh~~yvqgvawDpl~-qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLf 224 (434)
T KOG1009|consen 153 HAGQLLAI-------LDDHEHYVQGVAWDPLN-QYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLF 224 (434)
T ss_pred ccceeEee-------ccccccccceeecchhh-hhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeee
Confidence 99886544 34578899999999987 478887777766666655433222111
Q ss_pred -C-CCCCceeEEEECCCCCcEEEEEeC----CC--CCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCC----------
Q 046451 214 -E-SIKRRCSVLQWNPDVATQLVVASD----ED--SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPN---------- 275 (719)
Q Consensus 214 -~-~~~~~i~~l~~sp~g~~~l~~~s~----d~--~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~---------- 275 (719)
+ ....-...++|+|+|. ++++... ++ .-++.++|+-.....++..+.+-...+..+.|+|-
T Consensus 225 hDeTlksFFrRlsfTPdG~-llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~ 303 (434)
T KOG1009|consen 225 HDETLKSFFRRLSFTPDGS-LLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSE 303 (434)
T ss_pred ecCchhhhhhhcccCCCCc-EEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEecccccc
Confidence 0 1123346688999985 4554321 11 02256778776666677777776677777776651
Q ss_pred -------CCCeEEEEeCCCcEEEEECCCCeEEEEec-CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 276 -------DSSYLLTCAKDNRTICWDTVSGEIVSELP-AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 276 -------d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~-~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
-+..++++ ..+.|+|||.++-+.+.... -|-..|++++|+.|| ..|+..|.||.+.+..++..++-
T Consensus 304 ~~~~~lpyrlvfaiA-t~~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg-~~l~vSS~DGyCS~vtfe~~elg 377 (434)
T KOG1009|consen 304 KFLFVLPYRLVFAIA-TKNSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDG-SVLLVSSTDGFCSLVTFEPWELG 377 (434)
T ss_pred ccccccccceEEEEe-ecceEEEeccccccceEEEeeeeeeeecceeecCCC-cEEEEeccCCceEEEEEcchhcc
Confidence 11234444 45689999999988877664 477889999999999 78888888999999999887774
No 162
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.84 E-value=1.8e-19 Score=189.10 Aligned_cols=268 Identities=16% Similarity=0.259 Sum_probs=187.4
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
+-|.+.|..++|-|....|++++. +.++++||++.......- -.++|...|.+++|.++..
T Consensus 97 ~aH~nAifDl~wapge~~lVsasG----------DsT~r~Wdvk~s~l~G~~---~~~GH~~SvkS~cf~~~n~------ 157 (720)
T KOG0321|consen 97 LAHKNAIFDLKWAPGESLLVSASG----------DSTIRPWDVKTSRLVGGR---LNLGHTGSVKSECFMPTNP------ 157 (720)
T ss_pred ccccceeEeeccCCCceeEEEccC----------Cceeeeeeeccceeecce---eecccccccchhhhccCCC------
Confidence 457899999999995567777754 455699999976654331 2478999999999999875
Q ss_pred cceEEEEcCCCcEEEEcCCccccC------------CCCC------CCCceeeeccccCCEEE---EEEeCCCCCEEEEE
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISS------------GETG------GNPLIAHLSRHKGPVRG---LEFNSFTPNLLASG 142 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~------------~~~~------~~~~~~~l~~h~~~V~~---l~fsp~~~~~lasg 142 (719)
..+++|+.||.|.|||+...... ..+. ..+.+..-..|...|.+ +.+.. |...||++
T Consensus 158 -~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fk-De~tlaSa 235 (720)
T KOG0321|consen 158 -AVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFK-DESTLASA 235 (720)
T ss_pred -cceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEe-ccceeeec
Confidence 79999999999999998532210 0000 00111122234444544 44445 77899998
Q ss_pred eC-CCcEEEEcCCCCCCCCccCCccCC-CCCC---CCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc--eeEEecCC
Q 046451 143 AD-DGEICIWDLSAPAEPSHFPPLRGN-GSAA---QGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK--PVISFSES 215 (719)
Q Consensus 143 s~-dg~I~iwdl~~~~~~~~~~~l~~~-~~~h---~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~~ 215 (719)
+. |+.|+||||++............. ...| .-.+.++..+..|. +|++.+.|+.|++||+.+.. ++..+...
T Consensus 236 ga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt-~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~ 314 (720)
T KOG0321|consen 236 GAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGT-YLFASCTDNSIYFYNMRSLSISPVAEFSGK 314 (720)
T ss_pred cCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCC-eEEEEecCCcEEEEeccccCcCchhhccCc
Confidence 88 999999999987654332111110 0011 23677888888875 45555559999999998753 23333311
Q ss_pred CCCc-eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEEC
Q 046451 216 IKRR-CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDT 294 (719)
Q Consensus 216 ~~~~-i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~ 294 (719)
.... ...-..++|+ ..+++|+.|. ..++|.+.+.......+.+|...|++++|.+..-.-+++|++|.+++||++
T Consensus 315 ~~~sf~vks~lSpd~-~~l~SgSsd~---~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l 390 (720)
T KOG0321|consen 315 LNSSFYVKSELSPDD-CSLLSGSSDE---QAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRL 390 (720)
T ss_pred ccceeeeeeecCCCC-ceEeccCCCc---ceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEec
Confidence 1111 1223467887 5789999998 899999999888888899999999999999977778999999999999999
Q ss_pred CCC
Q 046451 295 VSG 297 (719)
Q Consensus 295 ~~~ 297 (719)
..+
T Consensus 391 ~~~ 393 (720)
T KOG0321|consen 391 SNG 393 (720)
T ss_pred cCc
Confidence 654
No 163
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.84 E-value=1.4e-18 Score=183.98 Aligned_cols=247 Identities=19% Similarity=0.271 Sum_probs=198.8
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccc-cCCEEEEEEeCCCCCEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRH-KGPVRGLEFNSFTPNLLAS 141 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h-~~~V~~l~fsp~~~~~las 141 (719)
....|.+++|+... +.||.+-.||.|.||++.. .+-....+.++ +..|.+|+|++ +..|++
T Consensus 24 ~Ps~I~slA~s~kS--------~~lAvsRt~g~IEiwN~~~--------~w~~~~vi~g~~drsIE~L~W~e--~~RLFS 85 (691)
T KOG2048|consen 24 KPSEIVSLAYSHKS--------NQLAVSRTDGNIEIWNLSN--------NWFLEPVIHGPEDRSIESLAWAE--GGRLFS 85 (691)
T ss_pred eccceEEEEEeccC--------CceeeeccCCcEEEEccCC--------CceeeEEEecCCCCceeeEEEcc--CCeEEe
Confidence 35789999999987 6899999999999999942 22455555554 45899999984 678889
Q ss_pred EeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-CCCCce
Q 046451 142 GADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-SIKRRC 220 (719)
Q Consensus 142 gs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-~~~~~i 220 (719)
.+.+|+|.-||+.+.+....+ ....+.|++++.++.+ ..++.||+||.++.++...++....... ..++++
T Consensus 86 ~g~sg~i~EwDl~~lk~~~~~-------d~~gg~IWsiai~p~~-~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRv 157 (691)
T KOG2048|consen 86 SGLSGSITEWDLHTLKQKYNI-------DSNGGAIWSIAINPEN-TILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRV 157 (691)
T ss_pred ecCCceEEEEecccCceeEEe-------cCCCcceeEEEeCCcc-ceEEeecCCceEEEEecCCceEEEEeecccccceE
Confidence 999999999999998876543 2345689999999996 6899999999888888887766544332 456899
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceE------EeeC-CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEE
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVK------EFVG-HTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~------~~~~-h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd 293 (719)
.+++|++++ ..++.|+.|+ .|++||...+.+... .+.. ...-|+++.|-. + ..|++|...|+|.+||
T Consensus 158 Lslsw~~~~-~~i~~Gs~Dg---~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lr-d-~tI~sgDS~G~V~FWd 231 (691)
T KOG2048|consen 158 LSLSWNPTG-TKIAGGSIDG---VIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLR-D-STIASGDSAGTVTFWD 231 (691)
T ss_pred EEEEecCCc-cEEEecccCc---eEEEEEcCCCceEEEeeecccccccCCceEEEEEEEee-c-CcEEEecCCceEEEEc
Confidence 999999998 5799999998 899999987644321 1111 223467777765 3 6799999999999999
Q ss_pred CCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 294 TVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 294 ~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
...+.++..+..|...|.+++..+++ ..+++++.|++|..|...+.+.
T Consensus 232 ~~~gTLiqS~~~h~adVl~Lav~~~~-d~vfsaGvd~~ii~~~~~~~~~ 279 (691)
T KOG2048|consen 232 SIFGTLIQSHSCHDADVLALAVADNE-DRVFSAGVDPKIIQYSLTTNKS 279 (691)
T ss_pred ccCcchhhhhhhhhcceeEEEEcCCC-CeEEEccCCCceEEEEecCCcc
Confidence 99999999999999999999999998 7889999999999998887644
No 164
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.83 E-value=4.6e-19 Score=185.91 Aligned_cols=283 Identities=19% Similarity=0.316 Sum_probs=211.4
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.....|..++|-|||..|+.+. ++.+.|||.+.+...+.+ .+|++.|+|++|+.||
T Consensus 10 ~~~hci~d~afkPDGsqL~lAA-----------g~rlliyD~ndG~llqtL-----KgHKDtVycVAys~dG-------- 65 (1081)
T KOG1538|consen 10 KAEHCINDIAFKPDGTQLILAA-----------GSRLLVYDTSDGTLLQPL-----KGHKDTVYCVAYAKDG-------- 65 (1081)
T ss_pred ccccchheeEECCCCceEEEec-----------CCEEEEEeCCCccccccc-----ccccceEEEEEEccCC--------
Confidence 3445899999999998776663 344579999877655544 6799999999999999
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeee-ccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL-SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l-~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
.++++|+.|..|.+|+-. ....+ ..|.+.|.|+.|+| -.+.|++++-+ ..-+|........+.
T Consensus 66 krFASG~aDK~VI~W~~k------------lEG~LkYSH~D~IQCMsFNP-~~h~LasCsLs-dFglWS~~qK~V~K~-- 129 (1081)
T KOG1538|consen 66 KRFASGSADKSVIIWTSK------------LEGILKYSHNDAIQCMSFNP-ITHQLASCSLS-DFGLWSPEQKSVSKH-- 129 (1081)
T ss_pred ceeccCCCceeEEEeccc------------ccceeeeccCCeeeEeecCc-hHHHhhhcchh-hccccChhhhhHHhh--
Confidence 799999999999999962 22222 24999999999999 67888888764 466787654432211
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec--CCCCCceeEEEECCCCC----cEEEEEe
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS--ESIKRRCSVLQWNPDVA----TQLVVAS 237 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~--~~~~~~i~~l~~sp~g~----~~l~~~s 237 (719)
.....|.+++|..|| .+|+.|-.||+|.|-+-. ++....+. .+.++.|.+++|+|... ..+++..
T Consensus 130 -------kss~R~~~CsWtnDG-qylalG~~nGTIsiRNk~-gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~D 200 (1081)
T KOG1538|consen 130 -------KSSSRIICCSWTNDG-QYLALGMFNGTISIRNKN-GEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVAD 200 (1081)
T ss_pred -------hhheeEEEeeecCCC-cEEEEeccCceEEeecCC-CCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEe
Confidence 123478999999998 599999999999998654 44333333 26788999999999742 2334443
Q ss_pred CCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcC
Q 046451 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYP 317 (719)
Q Consensus 238 ~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~sp 317 (719)
-.. ++.+|.+.. +.+..-..-.-.-.|+.+.+ +|.+++.|+.|+.+.+|. +.|-.+.++.....||+.+...|
T Consensus 201 W~q---TLSFy~LsG--~~Igk~r~L~FdP~CisYf~-NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~P 273 (1081)
T KOG1538|consen 201 WGQ---TLSFYQLSG--KQIGKDRALNFDPCCISYFT-NGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKP 273 (1081)
T ss_pred ccc---eeEEEEecc--eeecccccCCCCchhheecc-CCcEEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEcc
Confidence 333 566666542 21221122223456889999 999999999999999996 47888888877888999999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 318 KIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 318 dg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
++ ..++.|+.||+|..|++-......
T Consensus 274 Ns-Q~v~~GCqDGTiACyNl~fSTVH~ 299 (1081)
T KOG1538|consen 274 NS-QYVVVGCQDGTIACYNLIFSTVHG 299 (1081)
T ss_pred CC-ceEEEEEccCeeehhhhHHhHhhh
Confidence 99 799999999999999987655433
No 165
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.83 E-value=1.6e-18 Score=189.32 Aligned_cols=317 Identities=16% Similarity=0.208 Sum_probs=224.0
Q ss_pred ccCccceEEEcCCCC--e---EEEeecccee-----ecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCC
Q 046451 6 GINRSASVAFAPDAP--Y---MAAGTMAGAV-----DLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKN 75 (719)
Q Consensus 6 ~~~~V~~vafSpdg~--~---Latgs~dG~v-----~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~ 75 (719)
....+.++.|.+++. . ++.+..+..- .+-...+..+.||++..... .++ .......|.|+.|++.
T Consensus 179 ~~~~~~~~~w~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~vW~~~~p~~-Pe~----~~~~~s~v~~~~f~p~ 253 (555)
T KOG1587|consen 179 PKRQVTDESWHPTGSVLIAVSVAYSELDFDRYAFNKPLLSEPDGVLLVWSLKNPNT-PEL----VLESPSEVTCLKFCPF 253 (555)
T ss_pred hhcceeeeeeccCCCcceEEEEeecccccccccccccccccCCceEEEEecCCCCC-ceE----EEecCCceeEEEeccC
Confidence 345677888988876 1 1111111110 00111223689999986522 222 2446789999999998
Q ss_pred CCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCC--CEEEEEeCCCcEEEEcC
Q 046451 76 GSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTP--NLLASGADDGEICIWDL 153 (719)
Q Consensus 76 g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~--~~lasgs~dg~I~iwdl 153 (719)
.. .+|++|+.+|.|.+||+....... ....-.....|...+..+.|.. +. .-|++++.||.|+.|++
T Consensus 254 ~p-------~ll~gG~y~GqV~lWD~~~~~~~~---~s~ls~~~~sh~~~v~~vvW~~-~~~~~~f~s~ssDG~i~~W~~ 322 (555)
T KOG1587|consen 254 DP-------NLLAGGCYNGQVVLWDLRKGSDTP---PSGLSALEVSHSEPVTAVVWLQ-NEHNTEFFSLSSDGSICSWDT 322 (555)
T ss_pred Cc-------ceEEeeccCceEEEEEccCCCCCC---CcccccccccCCcCeEEEEEec-cCCCCceEEEecCCcEeeeec
Confidence 75 899999999999999995432100 0012233446899999999976 33 34899999999999988
Q ss_pred CCCCCCCccCCccCC-----CCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC---c-----eeEEecCCCCCce
Q 046451 154 SAPAEPSHFPPLRGN-----GSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---K-----PVISFSESIKRRC 220 (719)
Q Consensus 154 ~~~~~~~~~~~l~~~-----~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~---~-----~~~~~~~~~~~~i 220 (719)
+..........+... .......+++++|.+...+.|++|+++|.|..-+-... . ....+. .|.+.|
T Consensus 323 ~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~-~h~g~v 401 (555)
T KOG1587|consen 323 DMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFI-THIGPV 401 (555)
T ss_pred cccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCccccccccccccccc-ccCcce
Confidence 765543222111111 11223478999999888889999999999887443322 2 122333 688999
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC--e
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG--E 298 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~--~ 298 (719)
+++.++|-+..+|++++ |. +|+||.......++..+..+...|++++|||.....|+++..||.|.|||+... +
T Consensus 402 ~~v~~nPF~~k~fls~g-DW---~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~ 477 (555)
T KOG1587|consen 402 YAVSRNPFYPKNFLSVG-DW---TVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEE 477 (555)
T ss_pred EeeecCCCccceeeeec-cc---eeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccC
Confidence 99999999988888887 54 799999874567888888888889999999977789999999999999999754 4
Q ss_pred EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 299 ~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
.+.+...+....+.+.|+++| .+|+.|...|++++|++...-...
T Consensus 478 Pv~s~~~~~~~l~~~~~s~~g-~~lavGd~~G~~~~~~l~~~l~~~ 522 (555)
T KOG1587|consen 478 PVLSQKVCSPALTRVRWSPNG-KLLAVGDANGTTHILKLSESLAVP 522 (555)
T ss_pred CcccccccccccceeecCCCC-cEEEEecCCCcEEEEEcCchhhcc
Confidence 455555556667788899988 899999999999999997654433
No 166
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.82 E-value=1.6e-18 Score=166.23 Aligned_cols=264 Identities=16% Similarity=0.266 Sum_probs=198.3
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcC----CCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC---
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLV----DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT--- 135 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~----dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~--- 135 (719)
..-.++++.|+.... ...+||.|+. .+.|.|..+.. ..+ ......-..|.-+++.+.|.|+.
T Consensus 43 ap~~lya~~Ws~~~~-----~~~rla~gS~~Ee~~Nkvqiv~ld~----~s~--e~~~~a~fd~~YP~tK~~wiPd~~g~ 111 (364)
T KOG0290|consen 43 APWPLYAMNWSVRPD-----KKFRLAVGSFIEEYNNKVQIVQLDE----DSG--ELVEDANFDHPYPVTKLMWIPDSKGV 111 (364)
T ss_pred CCCceeeeccccCCC-----cceeEEEeeeccccCCeeEEEEEcc----CCC--ceeccCCCCCCCCccceEecCCcccc
Confidence 456678899985432 1268888874 46778877642 111 11112224688899999999943
Q ss_pred -CCEEEEEeCCCcEEEEcCCCCCCCCccC-Cc-cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce--eE
Q 046451 136 -PNLLASGADDGEICIWDLSAPAEPSHFP-PL-RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP--VI 210 (719)
Q Consensus 136 -~~~lasgs~dg~I~iwdl~~~~~~~~~~-~l-~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~--~~ 210 (719)
.++||+++ ..+++|.+...+...... .+ ......+...++++.|+.-+.++|.+++-|-++.|||++++.. +.
T Consensus 112 ~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vk 189 (364)
T KOG0290|consen 112 YPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVK 189 (364)
T ss_pred Ccchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeecccccee
Confidence 24676655 479999998543221110 01 1123446679999999988888999999999999999998733 33
Q ss_pred EecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCC--CCCeeEEEeCCCCCCeEEEEeCC-C
Q 046451 211 SFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGH--TKGVIAMSWCPNDSSYLLTCAKD-N 287 (719)
Q Consensus 211 ~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h--~~~V~~v~~sp~d~~~l~sgs~D-g 287 (719)
+....|...|..|+|...+..+|++.+.|| +|++||+|........++.. ......++|+++|-+++++-..| .
T Consensus 190 TQLIAHDKEV~DIaf~~~s~~~FASvgaDG---SvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~ 266 (364)
T KOG0290|consen 190 TQLIAHDKEVYDIAFLKGSRDVFASVGADG---SVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSN 266 (364)
T ss_pred eEEEecCcceeEEEeccCccceEEEecCCC---cEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCc
Confidence 333379999999999999888999999998 99999999865433334332 46788999999899999988765 5
Q ss_pred cEEEEECCC-CeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 288 RTICWDTVS-GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 288 ~I~iwd~~~-~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
.|.|.|++. ...+.++++|...|+.++|.|.....|+++++|..+.|||+..--.
T Consensus 267 ~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~ 322 (364)
T KOG0290|consen 267 KVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPR 322 (364)
T ss_pred eEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccc
Confidence 799999986 5678999999999999999999989999999999999999987544
No 167
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.82 E-value=3.8e-18 Score=165.88 Aligned_cols=297 Identities=16% Similarity=0.281 Sum_probs=199.9
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCC-CCC--CCceeeec-cccCCEEEEEEe-------C
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGE-TGG--NPLIAHLS-RHKGPVRGLEFN-------S 133 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~-~~~--~~~~~~l~-~h~~~V~~l~fs-------p 133 (719)
.-...+.|+||| ..|++-+.|..+.+|++-.....+. +.. ......++ ...+.|...+|- |
T Consensus 50 nf~kgckWSPDG--------SciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP 121 (406)
T KOG2919|consen 50 NFLKGCKWSPDG--------SCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQP 121 (406)
T ss_pred hhhccceeCCCC--------ceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCC
Confidence 334578999999 6899999999999999853322111 100 01111111 123567777775 4
Q ss_pred CCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEEC-CCCceeE--
Q 046451 134 FTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDL-KKQKPVI-- 210 (719)
Q Consensus 134 ~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~-~~~~~~~-- 210 (719)
+.+++++.+.+.-|++||.-+++....+....... .-....+++|++||+ .|+ ++...+|++||+ |.|+...
T Consensus 122 -~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~d--e~taAhsL~Fs~DGe-qlf-aGykrcirvFdt~RpGr~c~vy 196 (406)
T KOG2919|consen 122 -STNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQD--EYTAAHSLQFSPDGE-QLF-AGYKRCIRVFDTSRPGRDCPVY 196 (406)
T ss_pred -ccceeeeccccCceeeeeccccccccchhhhhhHH--hhhhheeEEecCCCC-eEe-ecccceEEEeeccCCCCCCcch
Confidence 56799999999999999999998776653222110 011456899999996 444 456789999999 5554222
Q ss_pred -Eec---CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe-C
Q 046451 211 -SFS---ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA-K 285 (719)
Q Consensus 211 -~~~---~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs-~ 285 (719)
++. .+..+.|.+++|+|.....+++++... .+-||.-.+ ..++..+.+|.++|+.++|++ +|+.|++|. .
T Consensus 197 ~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q---~~giy~~~~-~~pl~llggh~gGvThL~~~e-dGn~lfsGaRk 271 (406)
T KOG2919|consen 197 TTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQ---RVGIYNDDG-RRPLQLLGGHGGGVTHLQWCE-DGNKLFSGARK 271 (406)
T ss_pred hhhhcccccccceeeeeeccCCCCcceeeecccc---eeeeEecCC-CCceeeecccCCCeeeEEecc-CcCeecccccC
Confidence 111 134678999999999888899999887 677777544 477888899999999999999 888888887 5
Q ss_pred CCcEEEEECCC-CeEEEEecCCCC-CeEE--eEEcCCCCCEEEEEeCCCcEEEEeCCC-Ccccc-cCCCCCCCCCccCcc
Q 046451 286 DNRTICWDTVS-GEIVSELPAGTN-WNFD--IHWYPKIPGVISASSFDGKIGIYNIEG-CSRYG-VGDSNFSAAPLRAPK 359 (719)
Q Consensus 286 Dg~I~iwd~~~-~~~~~~l~~h~~-~v~~--l~~spdg~~~las~s~Dg~I~iwd~~~-~~~~~-~~~~~~~~~~~~~p~ 359 (719)
|-.|.+||++. +..+..+..|.. .-.. +...+++ .+|++|+.||.|++||+.+ +..+. .......+ +...
T Consensus 272 ~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~-~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~v---Ngvs 347 (406)
T KOG2919|consen 272 DDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKG-EILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTV---NGVS 347 (406)
T ss_pred CCeEEEEeehhccchhhhhhhhccCccceEEEecCCCC-ceeeccCCCccEEEEecCCCCCcccccccccccc---ccee
Confidence 77999999985 566777776654 2223 4556777 7999999999999999998 44222 11111111 2222
Q ss_pred eecCCCceeeeeCCcEEEEccCCC
Q 046451 360 WYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 360 w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
..+.-..++-+.+-++...-.++.
T Consensus 348 lnP~mpilatssGqr~f~~~~dD~ 371 (406)
T KOG2919|consen 348 LNPIMPILATSSGQRIFKYPKDDN 371 (406)
T ss_pred cCcccceeeeccCceeecCCCccc
Confidence 222223445566666666555533
No 168
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.81 E-value=3.7e-18 Score=169.24 Aligned_cols=296 Identities=13% Similarity=0.134 Sum_probs=213.7
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCccccee--ecccCCCCCceeeeecCCCCCCCC
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLL--VGESPSSERFNRLAWGKNGSGSED 81 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~--~~~~~~~~~V~~l~~sp~g~~~~~ 81 (719)
+.|.+.|.++.||.++++||+|+.|-.+ ++|.++..-..+.-+. +....|...|.|++|.-..
T Consensus 53 ~~H~GCiNAlqFS~N~~~L~SGGDD~~~----------~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N----- 117 (609)
T KOG4227|consen 53 REHTGCINALQFSHNDRFLASGGDDMHG----------RVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLEN----- 117 (609)
T ss_pred hhhccccceeeeccCCeEEeecCCccee----------eeechHHHHhhcCCCCceeccCccccceEEEEEccCC-----
Confidence 4578999999999999999999877766 7888764322222111 3334577899999998876
Q ss_pred CccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec--cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCC
Q 046451 82 FSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS--RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEP 159 (719)
Q Consensus 82 ~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~--~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~ 159 (719)
.+|++|..+++|.+.|+++ . +.+..+. ...+.|+.+..+| ..+.|++.+.++.|.|||++.....
T Consensus 118 ---~~~~SG~~~~~VI~HDiEt------~---qsi~V~~~~~~~~~VY~m~~~P-~DN~~~~~t~~~~V~~~D~Rd~~~~ 184 (609)
T KOG4227|consen 118 ---RFLYSGERWGTVIKHDIET------K---QSIYVANENNNRGDVYHMDQHP-TDNTLIVVTRAKLVSFIDNRDRQNP 184 (609)
T ss_pred ---eeEecCCCcceeEeeeccc------c---eeeeeecccCcccceeecccCC-CCceEEEEecCceEEEEeccCCCCC
Confidence 7999999999999999943 2 3333332 2345999999999 4789999999999999999876633
Q ss_pred CccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce-eEEecC--C---CCCceeEEEECCCCCcEE
Q 046451 160 SHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP-VISFSE--S---IKRRCSVLQWNPDVATQL 233 (719)
Q Consensus 160 ~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~-~~~~~~--~---~~~~i~~l~~sp~g~~~l 233 (719)
.... +.. ........+.|+|....+|++.+..+-+-+||++.... +..... + ....-.++.|+++|. .|
T Consensus 185 ~~~~-~~A---N~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~-Q~ 259 (609)
T KOG4227|consen 185 ISLV-LPA---NSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGN-QF 259 (609)
T ss_pred Ccee-eec---CCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCC-ee
Confidence 2221 111 12346788999999888999999999999999986532 221110 1 122336788999995 45
Q ss_pred EEEeCCCCCCcEEEEecCCCCCceEEeeC------CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC----------C
Q 046451 234 VVASDEDSSPALRLWDMRNTMSPVKEFVG------HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS----------G 297 (719)
Q Consensus 234 ~~~s~d~~~~~I~lwDl~~~~~~~~~~~~------h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~----------~ 297 (719)
++-.... .-.+||+......+..+.. ....+.+++|.- ..-+++|+.+-.|++|.+-. |
T Consensus 260 msiRR~~---~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~--D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG 334 (609)
T KOG4227|consen 260 MSIRRGK---CPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFID--DYTVATGSDHWGIHIWKLPRANDSYGFTQIG 334 (609)
T ss_pred hhhhccC---CCEEeeeecccceeEeccCCCCcceeeeeeeeeeeec--ceeeeccCcccceEEEecCCCccccCccccC
Confidence 5544444 5677888764444444331 123566788874 45599999999999998742 1
Q ss_pred -------------eEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 298 -------------EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 298 -------------~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
+.+..+++|..-+..+.|++.. ++|++.+-.+.++||.-.
T Consensus 335 ~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~-~~l~SSGVE~~~KlWS~~ 387 (609)
T KOG4227|consen 335 HDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHN-NLLVSSGVENSFKLWSDH 387 (609)
T ss_pred cchhhCchhheecceeEEEecccccccceeecCCc-ceEeccchhhheeccccc
Confidence 2356678999999999999998 899999999999999743
No 169
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.80 E-value=3.9e-18 Score=167.26 Aligned_cols=279 Identities=16% Similarity=0.250 Sum_probs=195.1
Q ss_pred CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEE
Q 046451 20 PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIW 99 (719)
Q Consensus 20 ~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lw 99 (719)
..+|++-..|.| ++||..++.....+ ..+...++.++|..+.. ...+.+|+.||+|++|
T Consensus 41 ~~vav~lSngsv----------~lyd~~tg~~l~~f-----k~~~~~~N~vrf~~~ds------~h~v~s~ssDG~Vr~w 99 (376)
T KOG1188|consen 41 TAVAVSLSNGSV----------RLYDKGTGQLLEEF-----KGPPATTNGVRFISCDS------PHGVISCSSDGTVRLW 99 (376)
T ss_pred eeEEEEecCCeE----------EEEeccchhhhhee-----cCCCCcccceEEecCCC------CCeeEEeccCCeEEEE
Confidence 357888666655 89998876554444 45777888999977531 1689999999999999
Q ss_pred cCCccccCCCCCCCCceeeecccc-CCEEEEEEeCCCCCEEEEEe----CCCcEEEEcCCCCCCCCccCCccCCCCCCCC
Q 046451 100 NPLSLISSGETGGNPLIAHLSRHK-GPVRGLEFNSFTPNLLASGA----DDGEICIWDLSAPAEPSHFPPLRGNGSAAQG 174 (719)
Q Consensus 100 d~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~fsp~~~~~lasgs----~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~ 174 (719)
|++.... ........+. ....|++.+. ..+++++|+ .|-.|.+||++..+.. +......|.+
T Consensus 100 D~Rs~~e-------~a~~~~~~~~~~~f~~ld~nc-k~~ii~~GtE~~~s~A~v~lwDvR~~qq~-----l~~~~eSH~D 166 (376)
T KOG1188|consen 100 DIRSQAE-------SARISWTQQSGTPFICLDLNC-KKNIIACGTELTRSDASVVLWDVRSEQQL-----LRQLNESHND 166 (376)
T ss_pred Eeecchh-------hhheeccCCCCCcceEeeccC-cCCeEEeccccccCceEEEEEEeccccch-----hhhhhhhccC
Confidence 9964221 3333444455 4566777665 567788775 3667999999987763 3333457899
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc----eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEec
Q 046451 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQK----PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDM 250 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~----~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl 250 (719)
.|++++|+|.+.++|++|+.||.|.|||++... .+..+. +...|.++.|..++-..|.+-+..+ +..+|++
T Consensus 167 DVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN--~~sSI~~igw~~~~ykrI~clTH~E---tf~~~el 241 (376)
T KOG1188|consen 167 DVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVIN--HGSSIHLIGWLSKKYKRIMCLTHME---TFAIYEL 241 (376)
T ss_pred cceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhc--ccceeeeeeeecCCcceEEEEEccC---ceeEEEc
Confidence 999999999999999999999999999998643 233343 7888999999998855566666666 7999999
Q ss_pred CCCCCceEEeeCC------------CCCeeEEEeCCCCCCeEEEEeC-CCcEEEEEC---CCC---eEEEEecC-CCCCe
Q 046451 251 RNTMSPVKEFVGH------------TKGVIAMSWCPNDSSYLLTCAK-DNRTICWDT---VSG---EIVSELPA-GTNWN 310 (719)
Q Consensus 251 ~~~~~~~~~~~~h------------~~~V~~v~~sp~d~~~l~sgs~-Dg~I~iwd~---~~~---~~~~~l~~-h~~~v 310 (719)
+.+.. ...+... ...+... .++.+...++.++. -|+..++-+ .++ +.+..+.+ |...|
T Consensus 242 e~~~~-~~~~~~~~~~~~d~r~~~~~dY~I~~-~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiV 319 (376)
T KOG1188|consen 242 EDGSE-ETWLENPDVSADDLRKEDNCDYVINE-HSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIV 319 (376)
T ss_pred cCCCh-hhcccCccchhhhHHhhhhhhheeec-ccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHH
Confidence 87642 2222111 1122222 23445666666554 566666533 333 34555665 66678
Q ss_pred EEeEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 046451 311 FDIHWYPKIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 311 ~~l~~spdg~~~las~s~Dg~I~iwd~~~~ 340 (719)
.++.|.-.+ .++.||++||.+.+|..+..
T Consensus 320 R~i~~~~~~-~~l~TGGEDG~l~~Wk~~da 348 (376)
T KOG1188|consen 320 RDILFDVKN-DVLYTGGEDGLLQAWKVEDA 348 (376)
T ss_pred HHHhhhccc-ceeeccCCCceEEEEecCCc
Confidence 899999777 89999999999999997443
No 170
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.80 E-value=3.9e-18 Score=169.80 Aligned_cols=239 Identities=16% Similarity=0.265 Sum_probs=184.3
Q ss_pred CCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCC
Q 046451 92 VDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSA 171 (719)
Q Consensus 92 ~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~ 171 (719)
..|...+.-+. +.|.-....-.+.+|++.|.+++|+|++.+.||+|+.|.+|.||++-.+.....+........+
T Consensus 55 gGgaf~ViPl~-----k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~g 129 (472)
T KOG0303|consen 55 GGGAFLVIPLV-----KTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYG 129 (472)
T ss_pred CCcceeecccc-----cccccCCCCCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEee
Confidence 34455555443 2332224445678999999999999999999999999999999999887766555434445667
Q ss_pred CCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecC
Q 046451 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR 251 (719)
Q Consensus 172 h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~ 251 (719)
|...|..+.|+|.-.++|++++.|.+|.+||+.+++.+.++. |...|.++.|+.|| .+|++++.|. .|+|||.+
T Consensus 130 H~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~--hpd~i~S~sfn~dG-s~l~TtckDK---kvRv~dpr 203 (472)
T KOG0303|consen 130 HQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD--HPDMVYSMSFNRDG-SLLCTTCKDK---KVRVIDPR 203 (472)
T ss_pred cceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC--CCCeEEEEEeccCC-ceeeeecccc---eeEEEcCC
Confidence 899999999999988999999999999999999999999987 99999999999999 5788888888 89999999
Q ss_pred CCCCceEEeeCCCC-CeeEEEeCCCCCCeEEEEe---CCCcEEEEECCCCe---EEEEecCCCCCeEEeEEcCCCCCEEE
Q 046451 252 NTMSPVKEFVGHTK-GVIAMSWCPNDSSYLLTCA---KDNRTICWDTVSGE---IVSELPAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 252 ~~~~~~~~~~~h~~-~V~~v~~sp~d~~~l~sgs---~Dg~I~iwd~~~~~---~~~~l~~h~~~v~~l~~spdg~~~la 324 (719)
++ +.+.+-.+|.+ .-..+.|-. ++.++-||- .+..+-+||..+-+ .+.+++..+ .|.---|.+|...+.+
T Consensus 204 ~~-~~v~e~~~heG~k~~Raifl~-~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSn-Gvl~PFyD~dt~ivYl 280 (472)
T KOG0303|consen 204 RG-TVVSEGVAHEGAKPARAIFLA-SGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSN-GVLLPFYDPDTSIVYL 280 (472)
T ss_pred CC-cEeeecccccCCCcceeEEec-cCceeeeccccccccceeccCcccccCcceeEEeccCC-ceEEeeecCCCCEEEE
Confidence 86 66666667765 334556666 677444443 46789999876543 345555444 4776677888744556
Q ss_pred EEeCCCcEEEEeCCCCcccc
Q 046451 325 ASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 325 s~s~Dg~I~iwd~~~~~~~~ 344 (719)
+|-.|+.|+.|.+.+.....
T Consensus 281 ~GKGD~~IRYyEit~d~P~~ 300 (472)
T KOG0303|consen 281 CGKGDSSIRYFEITNEPPFV 300 (472)
T ss_pred EecCCcceEEEEecCCCcee
Confidence 66679999999999877543
No 171
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.80 E-value=1.2e-17 Score=166.36 Aligned_cols=239 Identities=16% Similarity=0.222 Sum_probs=182.9
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
.+|...|.+++|+|.++ ..||+|++|.+|.||++-..... ..-.+.+..|.+|...|--+.|+|...+.|+
T Consensus 78 ~GHt~~vLDi~w~PfnD-------~vIASgSeD~~v~vW~IPe~~l~--~~ltepvv~L~gH~rrVg~V~wHPtA~NVLl 148 (472)
T KOG0303|consen 78 CGHTAPVLDIDWCPFND-------CVIASGSEDTKVMVWQIPENGLT--RDLTEPVVELYGHQRRVGLVQWHPTAPNVLL 148 (472)
T ss_pred cCccccccccccCccCC-------ceeecCCCCceEEEEECCCcccc--cCcccceEEEeecceeEEEEeecccchhhHh
Confidence 47999999999999865 89999999999999998543221 1112567889999999999999998889999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
+++.|.+|.|||+.+++....+ .|.+.|.+++|+.+| .+|++.+.|..|+|||.++++.+..-..+....-
T Consensus 149 sag~Dn~v~iWnv~tgeali~l--------~hpd~i~S~sfn~dG-s~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~ 219 (472)
T KOG0303|consen 149 SAGSDNTVSIWNVGTGEALITL--------DHPDMVYSMSFNRDG-SLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKP 219 (472)
T ss_pred hccCCceEEEEeccCCceeeec--------CCCCeEEEEEeccCC-ceeeeecccceeEEEcCCCCcEeeecccccCCCc
Confidence 9999999999999999876442 288899999999998 5999999999999999999999888753444556
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEee-CCCCCeeEEEeCCCCCCeEEEE-eCCCcEEEEECCCCe
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTC-AKDNRTICWDTVSGE 298 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~-~h~~~V~~v~~sp~d~~~l~sg-s~Dg~I~iwd~~~~~ 298 (719)
..+.|-.+|. ++.+|...-++..+.|||..+..+++.... ..+.+|.---|.+ |.++|+.+ -.|+.||.|.+....
T Consensus 220 ~Raifl~~g~-i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~-dt~ivYl~GKGD~~IRYyEit~d~ 297 (472)
T KOG0303|consen 220 ARAIFLASGK-IFTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDP-DTSIVYLCGKGDSSIRYFEITNEP 297 (472)
T ss_pred ceeEEeccCc-eeeeccccccccceeccCcccccCcceeEEeccCCceEEeeecC-CCCEEEEEecCCcceEEEEecCCC
Confidence 6677888885 666666666667899999988777654332 2345666666777 66666554 579999999997654
Q ss_pred E-EEEecC--CCCCeEEeEEcCCC
Q 046451 299 I-VSELPA--GTNWNFDIHWYPKI 319 (719)
Q Consensus 299 ~-~~~l~~--h~~~v~~l~~spdg 319 (719)
. ++.+.. ....-..+.|-|..
T Consensus 298 P~~hyln~f~S~epQRG~g~mPKR 321 (472)
T KOG0303|consen 298 PFVHYLNTFSSKEPQRGMGFMPKR 321 (472)
T ss_pred ceeEEecccccCCccccccccccc
Confidence 2 222221 12234556676654
No 172
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.80 E-value=3.5e-16 Score=169.81 Aligned_cols=293 Identities=26% Similarity=0.477 Sum_probs=219.1
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccC-CcccceeecccCCC-CCceeeee-cCCCCCCC
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQS-EDRDLLLVGESPSS-ERFNRLAW-GKNGSGSE 80 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~-~~~~~~~~~~~~~~-~~V~~l~~-sp~g~~~~ 80 (719)
..+.+.+.++.|..++..++.++.++.+ .+|+..... ....+ .... ..+..+.+ ++++.
T Consensus 62 ~~~~~~i~~~~~~~~~~~~~~~~~d~~~----------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~--- 123 (466)
T COG2319 62 RGHEDSITSIAFSPDGELLLSGSSDGTI----------KLWDLDNGEKLIKSL-----EGLHDSSVSKLALSSPDGN--- 123 (466)
T ss_pred eeccceEEEEEECCCCcEEEEecCCCcE----------EEEEcCCCceeEEEE-----eccCCCceeeEEEECCCcc---
Confidence 3566789999999999999999877666 677776543 11111 1111 36667777 55541
Q ss_pred CCccceEEEEc-CCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC-CCcEEEEcCCCCCC
Q 046451 81 DFSLGLVAGGL-VDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD-DGEICIWDLSAPAE 158 (719)
Q Consensus 81 ~~~~~~lasgs-~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~-dg~I~iwdl~~~~~ 158 (719)
.+++..+ .|+.+.+|++.. .. .....+..|...|..++|++ ++.++++++. |+.+++|++.....
T Consensus 124 ----~~~~~~~~~d~~~~~~~~~~-----~~---~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (466)
T COG2319 124 ----SILLASSSLDGTVKLWDLST-----PG---KLIRTLEGHSESVTSLAFSP-DGKLLASGSSLDGTIKLWDLRTGKP 190 (466)
T ss_pred ----eEEeccCCCCccEEEEEecC-----CC---eEEEEEecCcccEEEEEECC-CCCEEEecCCCCCceEEEEcCCCce
Confidence 2455544 499999999832 13 66778889999999999999 6778888885 99999999998554
Q ss_pred CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeE-EecCCCCCceeEEEECCCCCcEEEEEe
Q 046451 159 PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVI-SFSESIKRRCSVLQWNPDVATQLVVAS 237 (719)
Q Consensus 159 ~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~-~~~~~~~~~i~~l~~sp~g~~~l~~~s 237 (719)
...+ ..|...|.+++|++++..++++++.|+.|++||...+..+. .+. .|.... ...|++++ .++++++
T Consensus 191 ~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~-~~~~~~~~-~~~~~~~ 260 (466)
T COG2319 191 LSTL-------AGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLS-GHSDSV-VSSFSPDG-SLLASGS 260 (466)
T ss_pred EEee-------ccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecC-CCCcce-eEeECCCC-CEEEEec
Confidence 4332 23788999999998875355555899999999999777777 455 565554 33899998 5677888
Q ss_pred CCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec--CCCCCeEEeEE
Q 046451 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP--AGTNWNFDIHW 315 (719)
Q Consensus 238 ~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~--~h~~~v~~l~~ 315 (719)
.++ .+++||++.....+..+.+|...|.++.|++ ++..+++++.|+.+.+||..+........ .|...+..+.|
T Consensus 261 ~d~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (466)
T COG2319 261 SDG---TIRLWDLRSSSSLLRTLSGHSSSVLSVAFSP-DGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSF 336 (466)
T ss_pred CCC---cEEEeeecCCCcEEEEEecCCccEEEEEECC-CCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEE
Confidence 887 8999999876543444467889999999999 78888889999999999999888777765 78778999999
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 316 YPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 316 spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
.+++..++..+..|+.+.+|++....
T Consensus 337 ~~~~~~~~~~~~~d~~~~~~~~~~~~ 362 (466)
T COG2319 337 SPDGSLLVSGGSDDGTIRLWDLRTGK 362 (466)
T ss_pred CCCCCEEEEeecCCCcEEeeecCCCc
Confidence 43322344444678999999999887
No 173
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.79 E-value=2.5e-17 Score=154.30 Aligned_cols=284 Identities=20% Similarity=0.273 Sum_probs=200.4
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeec-----cCCcccceeecccCCCCCceeeeecCCCCCCC
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDF-----QSEDRDLLLVGESPSSERFNRLAWGKNGSGSE 80 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~-----~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~ 80 (719)
..+-|.+-+|||.++||++|+.+|.| .++.++. .+.....+++....|+..|+.++|..
T Consensus 9 ~~~tvf~qa~sp~~~~l~agn~~G~i----------av~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d------ 72 (325)
T KOG0649|consen 9 AYNTVFAQAISPSKQYLFAGNLFGDI----------AVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD------ 72 (325)
T ss_pred HHHHHHHHhhCCcceEEEEecCCCeE----------EEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh------
Confidence 34557788999999999999999887 3444432 12223444566688999999999984
Q ss_pred CCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeee--cccc-----CCEEEEEEeCCCCCEEEEEeCCCcEEEEcC
Q 046451 81 DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL--SRHK-----GPVRGLEFNSFTPNLLASGADDGEICIWDL 153 (719)
Q Consensus 81 ~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l--~~h~-----~~V~~l~fsp~~~~~lasgs~dg~I~iwdl 153 (719)
.+|++|+ ||.|+-|...+...+... +.+..+ ..|. -.|+.+...| ..+-++.++.|+.++-||+
T Consensus 73 ----~~Lls~g-dG~V~gw~W~E~~es~~~---K~lwe~~~P~~~~~~evPeINam~ldP-~enSi~~AgGD~~~y~~dl 143 (325)
T KOG0649|consen 73 ----DFLLSGG-DGLVYGWEWNEEEESLAT---KRLWEVKIPMQVDAVEVPEINAMWLDP-SENSILFAGGDGVIYQVDL 143 (325)
T ss_pred ----hheeecc-CceEEEeeehhhhhhccc---hhhhhhcCccccCcccCCccceeEecc-CCCcEEEecCCeEEEEEEe
Confidence 4677765 599999987544321100 111111 1122 3688899988 4455555668999999999
Q ss_pred CCCCCCCccCCccCCCCCCCCCeEEEEe-cCCCCcEEEEEeCCCcEEEEECCCCceeEEecC---------CCCCceeEE
Q 046451 154 SAPAEPSHFPPLRGNGSAAQGEISFVSW-NSKVQHILASTSYNGTTVVWDLKKQKPVISFSE---------SIKRRCSVL 223 (719)
Q Consensus 154 ~~~~~~~~~~~l~~~~~~h~~~I~~l~~-sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~---------~~~~~i~~l 223 (719)
++++..+. ..+|.+.|.++.- +..+ .+++|++||++++||+++++++..+.. .....|.++
T Consensus 144 E~G~i~r~-------~rGHtDYvH~vv~R~~~~--qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigal 214 (325)
T KOG0649|consen 144 EDGRIQRE-------YRGHTDYVHSVVGRNANG--QILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGAL 214 (325)
T ss_pred cCCEEEEE-------EcCCcceeeeeeecccCc--ceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEE
Confidence 99986655 3568999999988 4443 689999999999999999998877653 123456667
Q ss_pred EECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEe
Q 046451 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSEL 303 (719)
Q Consensus 224 ~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l 303 (719)
+.+.| .+++|+.. .+.+|.++.. ++...|. -...+..+.|. .+.++++++.+.|.-|.+ +|.....+
T Consensus 215 a~~ed---WlvCGgGp----~lslwhLrss-e~t~vfp-ipa~v~~v~F~---~d~vl~~G~g~~v~~~~l-~Gvl~a~i 281 (325)
T KOG0649|consen 215 AVNED---WLVCGGGP----KLSLWHLRSS-ESTCVFP-IPARVHLVDFV---DDCVLIGGEGNHVQSYTL-NGVLQANI 281 (325)
T ss_pred eccCc---eEEecCCC----ceeEEeccCC-CceEEEe-cccceeEeeee---cceEEEeccccceeeeee-ccEEEEec
Confidence 66654 56666555 5999999975 4455544 23567778885 468888999999999988 67776666
Q ss_pred cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEe
Q 046451 304 PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336 (719)
Q Consensus 304 ~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd 336 (719)
......+++..|+-.--++|..++..+++.|+.
T Consensus 282 p~~s~~c~s~s~~~~p~k~~s~ag~s~~~~i~~ 314 (325)
T KOG0649|consen 282 PVESTACYSASWQTSPIKFISIAGFSNKLHILK 314 (325)
T ss_pred cCCccceeeecccCCceEEEEecccceeeeeee
Confidence 666666777777765435677777777887764
No 174
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=1.4e-18 Score=180.55 Aligned_cols=267 Identities=18% Similarity=0.231 Sum_probs=197.8
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
...|.+.|..++|.+.. ..|++++.||.|.+|++++... ......+.+.+|++|.++|.|+++.. ++..+
T Consensus 290 l~s~~d~ir~l~~~~se--------p~lit~sed~~lk~WnLqk~~~-s~~~~~epi~tfraH~gPVl~v~v~~-n~~~~ 359 (577)
T KOG0642|consen 290 LRSHDDCIRALAFHPSE--------PVLITASEDGTLKLWNLQKAKK-SAEKDVEPILTFRAHEGPVLCVVVPS-NGEHC 359 (577)
T ss_pred eecchhhhhhhhcCCCC--------CeEEEeccccchhhhhhcccCC-ccccceeeeEEEecccCceEEEEecC-CceEE
Confidence 35578889999998876 6999999999999999954222 34444578899999999999999998 89999
Q ss_pred EEEeCCCcEEEEcCCCCCCC---CccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-C
Q 046451 140 ASGADDGEICIWDLSAPAEP---SHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-S 215 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~---~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-~ 215 (719)
++|+.||+|+.|++...... .....+.+...+|.+.|+.++++... ..|++|+.||++++|+...... .+|.. .
T Consensus 360 ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~-~~Llscs~DgTvr~w~~~~~~~-~~f~~~~ 437 (577)
T KOG0642|consen 360 YSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTK-DRLLSCSSDGTVRLWEPTEESP-CTFGEPK 437 (577)
T ss_pred EeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccc-cceeeecCCceEEeeccCCcCc-cccCCcc
Confidence 99999999999976522211 11112666778899999999999885 5799999999999999887665 33432 2
Q ss_pred CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC-------CCCCeeEEEeCCCCCCeEEEEeCCCc
Q 046451 216 IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG-------HTKGVIAMSWCPNDSSYLLTCAKDNR 288 (719)
Q Consensus 216 ~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~-------h~~~V~~v~~sp~d~~~l~sgs~Dg~ 288 (719)
..+.-.++++........++...-+ .-.++|+... ..+..+.. ....+..+.+++ ...+.+++..|+.
T Consensus 438 e~g~Plsvd~~ss~~a~~~~s~~~~---~~~~~~~ev~-s~~~~~~s~~~~~~~~~~~in~vVs~~-~~~~~~~~hed~~ 512 (577)
T KOG0642|consen 438 EHGYPLSVDRTSSRPAHSLASFRFG---YTSIDDMEVV-SDLLIFESSASPGPRRYPQINKVVSHP-TADITFTAHEDRS 512 (577)
T ss_pred ccCCcceEeeccchhHhhhhhcccc---cccchhhhhh-hheeeccccCCCcccccCccceEEecC-CCCeeEecccCCc
Confidence 2233345555443211222222111 2223333322 11222211 123567788898 7899999999999
Q ss_pred EEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 289 TICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 289 I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
|+++|..+++.+.....|...++++++.++| -+|++++.|+++++|++....++.
T Consensus 513 Ir~~dn~~~~~l~s~~a~~~svtslai~~ng-~~l~s~s~d~sv~l~kld~k~~~~ 567 (577)
T KOG0642|consen 513 IRFFDNKTGKILHSMVAHKDSVTSLAIDPNG-PYLMSGSHDGSVRLWKLDVKTCVL 567 (577)
T ss_pred eecccccccccchheeeccceecceeecCCC-ceEEeecCCceeehhhccchheee
Confidence 9999999999999999999999999999999 699999999999999998877654
No 175
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.79 E-value=2.2e-18 Score=163.28 Aligned_cols=288 Identities=18% Similarity=0.216 Sum_probs=195.0
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.+...|+++.|-.+++ |..|+..|.| ++|++.+......+. ..+...|+.+..-++
T Consensus 12 p~~~~v~s~~fqa~~r-L~sg~~~G~V----------~~w~lqt~r~~~~~r----~~g~~~it~lq~~p~--------- 67 (323)
T KOG0322|consen 12 PHSSSVTSVLFQANER-LMSGLSVGIV----------KMWVLQTERDLPLIR----LFGRLFITNLQSIPN--------- 67 (323)
T ss_pred cccchheehhhccchh-hhcccccceE----------EEEEeecCccchhhh----hhccceeeceeecCC---------
Confidence 4667899999998887 6678777766 899998765544332 135667778877776
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC-------C-CEEEEEeCCC-cEEEEcCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT-------P-NLLASGADDG-EICIWDLSA 155 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~-------~-~~lasgs~dg-~I~iwdl~~ 155 (719)
+.|.+-++|+.+.+|++. .. .....|.-.++++-|++.. . .+++.-++.. .+++-|...
T Consensus 68 d~l~tqgRd~~L~lw~ia------~s------~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~ 135 (323)
T KOG0322|consen 68 DSLDTQGRDPLLILWTIA------YS------AFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGD 135 (323)
T ss_pred cchhhcCCCceEEEEEcc------Cc------ceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCc
Confidence 478889999999999983 22 2223344455566665421 0 1111111100 011122211
Q ss_pred CCCCCccCCccCCCCCCCCCeEEEEecCCC--CcEEEEEeCCCcEEEEECCCCceeEEecC---------CCCCceeEEE
Q 046451 156 PAEPSHFPPLRGNGSAAQGEISFVSWNSKV--QHILASTSYNGTTVVWDLKKQKPVISFSE---------SIKRRCSVLQ 224 (719)
Q Consensus 156 ~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~---------~~~~~i~~l~ 224 (719)
...+.. .........+.+.|..|.-.. ..+|++|.++|.+.+||+.++..+..+.. .|...+.++.
T Consensus 136 ~tqv~i---~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsld 212 (323)
T KOG0322|consen 136 TTQVQI---ADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLD 212 (323)
T ss_pred cceeEc---cCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeee
Confidence 111111 222233445677787764332 23567788899999999999854443321 6888999999
Q ss_pred ECCCCCcEEEEEeCCCCCCcEEEEecCCCC--C-ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEE
Q 046451 225 WNPDVATQLVVASDEDSSPALRLWDMRNTM--S-PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301 (719)
Q Consensus 225 ~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~--~-~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~ 301 (719)
|.+.-.. =++++.++ .+..|++.... . ...++....-+|..+..-+ |++.|+++++|++||||..++...+.
T Consensus 213 yas~~~r-Gisgga~d---kl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRp-D~KIlATAGWD~RiRVyswrtl~pLA 287 (323)
T KOG0322|consen 213 YASSCDR-GISGGADD---KLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRP-DGKILATAGWDHRIRVYSWRTLNPLA 287 (323)
T ss_pred echhhcC-CcCCCccc---cceeeeeccccCcccccceEEecCCCccceEEcc-CCcEEeecccCCcEEEEEeccCCchh
Confidence 9876433 33444444 68889886531 1 1123333446788899999 99999999999999999999999999
Q ss_pred EecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeC
Q 046451 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337 (719)
Q Consensus 302 ~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~ 337 (719)
.++.|...|.+++|+++. .++|+++.|++|.+|++
T Consensus 288 VLkyHsagvn~vAfspd~-~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 288 VLKYHSAGVNAVAFSPDC-ELMAAASKDARISLWKL 322 (323)
T ss_pred hhhhhhcceeEEEeCCCC-chhhhccCCceEEeeec
Confidence 999999999999999997 69999999999999986
No 176
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.79 E-value=7.7e-19 Score=188.81 Aligned_cols=288 Identities=18% Similarity=0.259 Sum_probs=217.4
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
+.|.+.|+|+.|...|.+|++|+.|..| +||.+++..+.. ...+|++.|++++.+.+.
T Consensus 187 lgH~naVyca~fDrtg~~Iitgsdd~lv----------KiwS~et~~~lA-----s~rGhs~ditdlavs~~n------- 244 (1113)
T KOG0644|consen 187 LGHRNAVYCAIFDRTGRYIITGSDDRLV----------KIWSMETARCLA-----SCRGHSGDITDLAVSSNN------- 244 (1113)
T ss_pred HhhhhheeeeeeccccceEeecCcccee----------eeeeccchhhhc-----cCCCCccccchhccchhh-------
Confidence 3577899999999999999999876655 899987665543 347899999999999887
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
.++++++.|..|++|.+ .++ ..+..+.+|++.|++|+|+|. .+.+.||++++||.+-.-....-.
T Consensus 245 -~~iaaaS~D~vIrvWrl------~~~---~pvsvLrghtgavtaiafsP~-----~sss~dgt~~~wd~r~~~~~y~pr 309 (1113)
T KOG0644|consen 245 -TMIAAASNDKVIRVWRL------PDG---APVSVLRGHTGAVTAIAFSPR-----ASSSDDGTCRIWDARLEPRIYVPR 309 (1113)
T ss_pred -hhhhhcccCceEEEEec------CCC---chHHHHhccccceeeeccCcc-----ccCCCCCceEeccccccccccCCC
Confidence 79999999999999999 667 889999999999999999993 378899999999988221111111
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~ 243 (719)
+++. ...+.+.++-|...+ .-+++++.|+.-..|.+..... +...+.-+.++.+-..+.+++-.+-
T Consensus 310 p~~~---~~~~~~~s~~~~~~~-~~f~Tgs~d~ea~n~e~~~l~~-------~~~~lif~t~ssd~~~~~~~ar~~~--- 375 (1113)
T KOG0644|consen 310 PLKF---TEKDLVDSILFENNG-DRFLTGSRDGEARNHEFEQLAW-------RSNLLIFVTRSSDLSSIVVTARNDH--- 375 (1113)
T ss_pred CCCc---ccccceeeeeccccc-cccccccCCcccccchhhHhhh-------hccceEEEeccccccccceeeeeee---
Confidence 1221 123456677777776 5789999999988887653221 1111222222323334566666665
Q ss_pred cEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEE
Q 046451 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVI 323 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~l 323 (719)
.+.+|++.++ ..++.+.+|...+..+.++|-+.....+++.||.+.|||+..|..+..+......+.+..||.|| ..+
T Consensus 376 ~~~vwnl~~g-~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdg-ts~ 453 (1113)
T KOG0644|consen 376 RLCVWNLYTG-QLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDG-TSI 453 (1113)
T ss_pred Eeeeeecccc-hhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecccceeeccccCCCC-ceE
Confidence 7899999775 56788889999999999999777888899999999999999887766554334558889999999 677
Q ss_pred EEEeCCCcEEEEeCCCCcccc
Q 046451 324 SASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 324 as~s~Dg~I~iwd~~~~~~~~ 344 (719)
+....-|.++|.....++...
T Consensus 454 ~lsd~hgql~i~g~gqs~s~k 474 (1113)
T KOG0644|consen 454 ALSDDHGQLYILGTGQSKSQK 474 (1113)
T ss_pred ecCCCCCceEEeccCCCcccc
Confidence 767667899998876665543
No 177
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.78 E-value=9.8e-18 Score=174.77 Aligned_cols=250 Identities=17% Similarity=0.238 Sum_probs=192.5
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
..+|.+.|.||...+.| .+|++|+.||+|+||.+ .++ .+++++. ..+.|.||+|+|....-+
T Consensus 396 yrGHtg~Vr~iSvdp~G--------~wlasGsdDGtvriWEi------~Tg---Rcvr~~~-~d~~I~~vaw~P~~~~~v 457 (733)
T KOG0650|consen 396 YRGHTGLVRSISVDPSG--------EWLASGSDDGTVRIWEI------ATG---RCVRTVQ-FDSEIRSVAWNPLSDLCV 457 (733)
T ss_pred EeccCCeEEEEEecCCc--------ceeeecCCCCcEEEEEe------ecc---eEEEEEe-ecceeEEEEecCCCCcee
Confidence 45799999999999988 79999999999999999 677 8887776 456899999999544444
Q ss_pred EEEeCCCcEEEEcCCCCCCCCc------cC---------------------Ccc---CCCCCCCCCeEEEEecCCCCcEE
Q 046451 140 ASGADDGEICIWDLSAPAEPSH------FP---------------------PLR---GNGSAAQGEISFVSWNSKVQHIL 189 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~------~~---------------------~l~---~~~~~h~~~I~~l~~sp~g~~~l 189 (719)
+..+.++.+.|.+-.-+..+.. |. .+. .....|...|+.+.|+.+|. +|
T Consensus 458 LAvA~~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGD-Yl 536 (733)
T KOG0650|consen 458 LAVAVGECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGD-YL 536 (733)
T ss_pred EEEEecCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCc-eE
Confidence 4444445566665432211000 00 000 01123566899999999985 77
Q ss_pred EEEeC---CCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCC
Q 046451 190 ASTSY---NGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKG 266 (719)
Q Consensus 190 ~s~s~---dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~ 266 (719)
++... ...|.|+++...+...-|. ...+.+.++.|+|... +|++++.. .|+|||+.. ...++.+.....+
T Consensus 537 atV~~~~~~~~VliHQLSK~~sQ~PF~-kskG~vq~v~FHPs~p-~lfVaTq~----~vRiYdL~k-qelvKkL~tg~kw 609 (733)
T KOG0650|consen 537 ATVMPDSGNKSVLIHQLSKRKSQSPFR-KSKGLVQRVKFHPSKP-YLFVATQR----SVRIYDLSK-QELVKKLLTGSKW 609 (733)
T ss_pred EEeccCCCcceEEEEecccccccCchh-hcCCceeEEEecCCCc-eEEEEecc----ceEEEehhH-HHHHHHHhcCCee
Confidence 77654 3579999998877776665 5778899999999975 55566555 599999976 3566677777789
Q ss_pred eeEEEeCCCCCCeEEEEeCCCcEEEEECCCC-eEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeC
Q 046451 267 VIAMSWCPNDSSYLLTCAKDNRTICWDTVSG-EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337 (719)
Q Consensus 267 V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~-~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~ 337 (719)
|..++.++ .|+.|+.|+.|+.+..||+.-+ +...++..|...+++|+|++.- .++++|+.||++.||.-
T Consensus 610 iS~msihp-~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ry-PLfas~sdDgtv~Vfhg 679 (733)
T KOG0650|consen 610 ISSMSIHP-NGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRY-PLFASGSDDGTVIVFHG 679 (733)
T ss_pred eeeeeecC-CCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhcccc-ceeeeecCCCcEEEEee
Confidence 99999999 8999999999999999999754 6778889999999999999998 69999999999998853
No 178
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.77 E-value=3.4e-17 Score=159.77 Aligned_cols=293 Identities=14% Similarity=0.207 Sum_probs=208.4
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec--cccCCEEEEEEeCCC---
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS--RHKGPVRGLEFNSFT--- 135 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~--~h~~~V~~l~fsp~~--- 135 (719)
.+|...|..++|+.-.... ..+.+++.+ ...+.||+... ..+...+.... .|.+....++|+-+.
T Consensus 35 ed~~~~I~gv~fN~~~~~~---e~~vfatvG-~~rvtiy~c~~------d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~ 104 (385)
T KOG1034|consen 35 EDHNKPIFGVAFNSFLGCD---EPQVFATVG-GNRVTIYECPG------DGGIRLLQSYADEDHDESFYTCSWSYDSNTG 104 (385)
T ss_pred ccCCCccceeeeehhcCCC---CCceEEEeC-CcEEEEEEECC------ccceeeeeeccCCCCCcceEEEEEEecCCCC
Confidence 3577889999998532111 115666665 44678887631 21112222222 367788888987632
Q ss_pred CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-
Q 046451 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE- 214 (719)
Q Consensus 136 ~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~- 214 (719)
.-+||.++.-|.|+|.|+.+++.... ..+|...|+.|.++|+..+++++++.|..|++||+++..++..|..
T Consensus 105 ~p~la~~G~~GvIrVid~~~~~~~~~-------~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~ 177 (385)
T KOG1034|consen 105 NPFLAAGGYLGVIRVIDVVSGQCSKN-------YRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGV 177 (385)
T ss_pred CeeEEeecceeEEEEEecchhhhccc-------eeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEeccc
Confidence 34889999999999999998875544 4568889999999999888999999999999999999999988865
Q ss_pred -CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC-----Cc-------------------e---EEeeCCCCC
Q 046451 215 -SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM-----SP-------------------V---KEFVGHTKG 266 (719)
Q Consensus 215 -~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~-----~~-------------------~---~~~~~h~~~ 266 (719)
+|...|.+++|+.+|. .|++++.|- +|++|++.... +. . .+-..|...
T Consensus 178 egHrdeVLSvD~~~~gd-~i~ScGmDh---slk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrny 253 (385)
T KOG1034|consen 178 EGHRDEVLSVDFSLDGD-RIASCGMDH---SLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNY 253 (385)
T ss_pred ccccCcEEEEEEcCCCC-eeeccCCcc---eEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccch
Confidence 7999999999999996 799999998 99999997211 00 0 022347777
Q ss_pred eeEEEeCCCCCCeEEEEeCCCcEEEEECC-CC-------------eEEEEecCCCCCeEEeEE--cCCCCCEEEEEeCCC
Q 046451 267 VIAMSWCPNDSSYLLTCAKDNRTICWDTV-SG-------------EIVSELPAGTNWNFDIHW--YPKIPGVISASSFDG 330 (719)
Q Consensus 267 V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~-~~-------------~~~~~l~~h~~~v~~l~~--spdg~~~las~s~Dg 330 (719)
|-|+.|- |+++++-+.++.|.+|... -+ ..+.+++.....|+-+.| .+-+ .+||.|...|
T Consensus 254 VDCvrw~---gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~-~~la~gnq~g 329 (385)
T KOG1034|consen 254 VDCVRWF---GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQ-KMLALGNQSG 329 (385)
T ss_pred HHHHHHH---hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHH-HHHhhccCCC
Confidence 8888885 5899999999999999872 11 234445555555666655 4555 6899999999
Q ss_pred cEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCCCC
Q 046451 331 KIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSSAG 385 (719)
Q Consensus 331 ~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~~~ 385 (719)
+|.+||+++......... ...+-..+..-.+|+-||.+++.-.++...
T Consensus 330 ~v~vwdL~~~ep~~~ttl-------~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~V 377 (385)
T KOG1034|consen 330 KVYVWDLDNNEPPKCTTL-------THSKSGSTVRQTSFSRDGSILVLVCDDGTV 377 (385)
T ss_pred cEEEEECCCCCCccCceE-------EeccccceeeeeeecccCcEEEEEeCCCcE
Confidence 999999998776421110 111111223446899999988777766643
No 179
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=8.4e-17 Score=177.35 Aligned_cols=296 Identities=17% Similarity=0.205 Sum_probs=208.6
Q ss_pred cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 10 SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 10 V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
-..+.|+|-...|++++..- .|.|||...+.....+.. .......|+.+.+-.+.+. .++++
T Consensus 1067 pk~~~~hpf~p~i~~ad~r~----------~i~vwd~e~~~~l~~F~n--~~~~~t~Vs~l~liNe~D~------aLlLt 1128 (1387)
T KOG1517|consen 1067 PKTLKFHPFEPQIAAADDRE----------RIRVWDWEKGRLLNGFDN--GAFPDTRVSDLELINEQDD------ALLLT 1128 (1387)
T ss_pred CceeeecCCCceeEEcCCcc----------eEEEEecccCceeccccC--CCCCCCccceeeeecccch------hheee
Confidence 45688999999999885433 447888886655444322 2234567889988665422 69999
Q ss_pred EcCCCcEEEEcCCccccCCCCCCCCceeeecc-------ccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCcc
Q 046451 90 GLVDGSIDIWNPLSLISSGETGGNPLIAHLSR-------HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF 162 (719)
Q Consensus 90 gs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~-------h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~ 162 (719)
|+.||.|+||+-..... +..+.+..... -.+.=.-++|....+ +|++++.-..|+|||.........+
T Consensus 1129 as~dGvIRIwk~y~~~~----~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G-~Ll~tGd~r~IRIWDa~~E~~~~di 1203 (1387)
T KOG1517|consen 1129 ASSDGVIRIWKDYADKW----KKPELVTAWSSLSDQLPGARGTGLVVDWQQQSG-HLLVTGDVRSIRIWDAHKEQVVADI 1203 (1387)
T ss_pred eccCceEEEeccccccc----CCceeEEeeccccccCccCCCCCeeeehhhhCC-eEEecCCeeEEEEEecccceeEeec
Confidence 99999999998542210 11123322221 111113466776444 4545555789999999987766553
Q ss_pred CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce---eEEecCCCCCc--eeEEEECCCCCcEEEEEe
Q 046451 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP---VISFSESIKRR--CSVLQWNPDVATQLVVAS 237 (719)
Q Consensus 163 ~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~---~~~~~~~~~~~--i~~l~~sp~g~~~l~~~s 237 (719)
+ .+....|+++.-+-..+++|++|..||.|++||.+.... +.... .|... |..+.+.+.|-..|++++
T Consensus 1204 P------~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R-~h~~~~~Iv~~slq~~G~~elvSgs 1276 (1387)
T KOG1517|consen 1204 P------YGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYR-EHNDVEPIVHLSLQRQGLGELVSGS 1276 (1387)
T ss_pred c------cCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeec-ccCCcccceeEEeecCCCcceeeec
Confidence 2 123457888877666668999999999999999986432 33333 56666 999999998866799999
Q ss_pred CCCCCCcEEEEecCCC-CCceEEeeCCC--C-CeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCC-------
Q 046451 238 DEDSSPALRLWDMRNT-MSPVKEFVGHT--K-GVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAG------- 306 (719)
Q Consensus 238 ~d~~~~~I~lwDl~~~-~~~~~~~~~h~--~-~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h------- 306 (719)
.+| .|++||+|.. .+...++..|. + .++++..+. +...+++|+. +.|+||++ .|+.+..++.+
T Consensus 1277 ~~G---~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~-hapiiAsGs~-q~ikIy~~-~G~~l~~~k~n~~F~~q~ 1350 (1387)
T KOG1517|consen 1277 QDG---DIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHE-HAPIIASGSA-QLIKIYSL-SGEQLNIIKYNPGFMGQR 1350 (1387)
T ss_pred cCC---eEEEEecccCcccccceeeeccccCccceeeeecc-CCCeeeecCc-ceEEEEec-ChhhhcccccCcccccCc
Confidence 998 8999999973 22233344443 3 489999998 8899999988 99999999 56666555432
Q ss_pred CCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 307 TNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 307 ~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
...+.+++|+|.. .+||+|+.|.+|.||..+....
T Consensus 1351 ~gs~scL~FHP~~-~llAaG~~Ds~V~iYs~~k~~~ 1385 (1387)
T KOG1517|consen 1351 IGSVSCLAFHPHR-LLLAAGSADSTVSIYSCEKPRL 1385 (1387)
T ss_pred CCCcceeeecchh-HhhhhccCCceEEEeecCCcCC
Confidence 3467899999997 7899999999999999887654
No 180
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.75 E-value=1.7e-17 Score=169.39 Aligned_cols=305 Identities=19% Similarity=0.238 Sum_probs=231.3
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
+|.+.|..|.|+..|..|++|+.|-.| .+||+...... +....+|...|.--.|-|...+
T Consensus 140 ~H~GcVntV~FN~~Gd~l~SgSDD~~v----------v~WdW~~~~~~----l~f~SGH~~NvfQaKFiP~s~d------ 199 (559)
T KOG1334|consen 140 KHKGCVNTVHFNQRGDVLASGSDDLQV----------VVWDWVSGSPK----LSFESGHCNNVFQAKFIPFSGD------ 199 (559)
T ss_pred CCCCccceeeecccCceeeccCccceE----------EeehhhccCcc----cccccccccchhhhhccCCCCC------
Confidence 467889999999999999999876655 78998865443 2345678888888889887633
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
..|++++.||.|++=.+. ..+..+..+.+..|.+.|..++.-|++..-|.+++.|+.++-+|++.......+.
T Consensus 200 ~ti~~~s~dgqvr~s~i~------~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~- 272 (559)
T KOG1334|consen 200 RTIVTSSRDGQVRVSEIL------ETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFV- 272 (559)
T ss_pred cCceeccccCceeeeeec------cccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceee-
Confidence 689999999999998873 2212233567778999999999999888899999999999999999877655542
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce------eEEec-----CCCCCceeEEEECCCCCcEE
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP------VISFS-----ESIKRRCSVLQWNPDVATQL 233 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~------~~~~~-----~~~~~~i~~l~~sp~g~~~l 233 (719)
.+.......-....++.+|...+.+++++.|-.+++||.+.-.. +..|. ......|++++|+.++..++
T Consensus 273 cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElL 352 (559)
T KOG1334|consen 273 CREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELL 352 (559)
T ss_pred eeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCcccee
Confidence 11111111126788999998888999999999999999876322 12221 13456799999998887666
Q ss_pred EEEeCCCCCCcEEEEecCCCC-----------Cce-EEeeCCCC--CeeEEEeC-CCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 234 VVASDEDSSPALRLWDMRNTM-----------SPV-KEFVGHTK--GVIAMSWC-PNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 234 ~~~s~d~~~~~I~lwDl~~~~-----------~~~-~~~~~h~~--~V~~v~~s-p~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
++-.+. .|+++.-..+. ..+ +.+++|.. .|..+-|- | ...|+++|+..|.|.|||-.+++
T Consensus 353 aSYnDe----~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGP-rsEyVvSGSDCGhIFiW~K~t~e 427 (559)
T KOG1334|consen 353 ASYNDE----DIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGP-RSEYVVSGSDCGHIFIWDKKTGE 427 (559)
T ss_pred eeeccc----ceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccC-ccceEEecCccceEEEEecchhH
Confidence 666655 59999533211 112 23677764 46677665 5 68999999999999999999999
Q ss_pred EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 299 ~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
++..+++...-|+||.=+|-- -+||+++-|..|+||.-.+.+.
T Consensus 428 ii~~MegDr~VVNCLEpHP~~-PvLAsSGid~DVKIWTP~~~er 470 (559)
T KOG1334|consen 428 IIRFMEGDRHVVNCLEPHPHL-PVLASSGIDHDVKIWTPLTAER 470 (559)
T ss_pred HHHHhhcccceEeccCCCCCC-chhhccCCccceeeecCCcccc
Confidence 999998877789999999998 5999999999999998754443
No 181
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.74 E-value=1.5e-15 Score=161.55 Aligned_cols=274 Identities=9% Similarity=0.118 Sum_probs=172.2
Q ss_pred CCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEE-EcCCCcEEEEcCCccccCCCCCCCCc
Q 046451 37 SSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAG-GLVDGSIDIWNPLSLISSGETGGNPL 115 (719)
Q Consensus 37 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~las-gs~dg~I~lwd~~~~~~~~~~~~~~~ 115 (719)
.++.|.+|+++... .+.+.....+......+++++++ ++|++ +..++.|.+|+++. ++ ....
T Consensus 10 ~~~~I~~~~~~~~g---~l~~~~~~~~~~~~~~l~~spd~--------~~lyv~~~~~~~i~~~~~~~-----~g-~l~~ 72 (330)
T PRK11028 10 ESQQIHVWNLNHEG---ALTLLQVVDVPGQVQPMVISPDK--------RHLYVGVRPEFRVLSYRIAD-----DG-ALTF 72 (330)
T ss_pred CCCCEEEEEECCCC---ceeeeeEEecCCCCccEEECCCC--------CEEEEEECCCCcEEEEEECC-----CC-ceEE
Confidence 34556899996332 22233334455678889999998 56654 45688999999841 11 0011
Q ss_pred eeeeccccCCEEEEEEeCCCCCEEEEEe-CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC
Q 046451 116 IAHLSRHKGPVRGLEFNSFTPNLLASGA-DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY 194 (719)
Q Consensus 116 ~~~l~~h~~~V~~l~fsp~~~~~lasgs-~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~ 194 (719)
+.... ..+....+.|++ ++++|++++ .++.|.+||+++....... ... ..+.....+++++++++.++++...
T Consensus 73 ~~~~~-~~~~p~~i~~~~-~g~~l~v~~~~~~~v~v~~~~~~g~~~~~--~~~--~~~~~~~~~~~~~p~g~~l~v~~~~ 146 (330)
T PRK11028 73 AAESP-LPGSPTHISTDH-QGRFLFSASYNANCVSVSPLDKDGIPVAP--IQI--IEGLEGCHSANIDPDNRTLWVPCLK 146 (330)
T ss_pred eeeec-CCCCceEEEECC-CCCEEEEEEcCCCeEEEEEECCCCCCCCc--eee--ccCCCcccEeEeCCCCCEEEEeeCC
Confidence 22222 234567899999 677766665 5899999999754322111 110 0112346778899998656667777
Q ss_pred CCcEEEEECCCCceeEE-----ecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC---CceEEeeCC---
Q 046451 195 NGTTVVWDLKKQKPVIS-----FSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM---SPVKEFVGH--- 263 (719)
Q Consensus 195 dg~I~iwd~~~~~~~~~-----~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~---~~~~~~~~h--- 263 (719)
++.|.+||+++...+.. ...........++|+++|++++++...++ .|.+||++... +.+..+..+
T Consensus 147 ~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~---~v~v~~~~~~~~~~~~~~~~~~~p~~ 223 (330)
T PRK11028 147 EDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNS---SVDVWQLKDPHGEIECVQTLDMMPAD 223 (330)
T ss_pred CCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCC---EEEEEEEeCCCCCEEEEEEEecCCCc
Confidence 89999999987432211 11123455678999999965555544455 89999997421 122233221
Q ss_pred ---CCCeeEEEeCCCCCCeEEEEe-CCCcEEEEECCCCe----EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEE
Q 046451 264 ---TKGVIAMSWCPNDSSYLLTCA-KDNRTICWDTVSGE----IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIY 335 (719)
Q Consensus 264 ---~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~~~~----~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iw 335 (719)
......+.|+| ++++|+++. .++.|.+|++.... .+..+... .....+.|++||+.++++...+++|.+|
T Consensus 224 ~~~~~~~~~i~~~p-dg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~-~~p~~~~~~~dg~~l~va~~~~~~v~v~ 301 (330)
T PRK11028 224 FSDTRWAADIHITP-DGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTE-TQPRGFNIDHSGKYLIAAGQKSHHISVY 301 (330)
T ss_pred CCCCccceeEEECC-CCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEecc-ccCCceEECCCCCEEEEEEccCCcEEEE
Confidence 12334688999 888888875 47899999986432 23333222 2456899999995555555568999999
Q ss_pred eCC
Q 046451 336 NIE 338 (719)
Q Consensus 336 d~~ 338 (719)
+++
T Consensus 302 ~~~ 304 (330)
T PRK11028 302 EID 304 (330)
T ss_pred EEc
Confidence 885
No 182
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.74 E-value=2.1e-16 Score=172.86 Aligned_cols=265 Identities=18% Similarity=0.241 Sum_probs=193.7
Q ss_pred cCccceEEEcCC-CCeEEEeeccceeecccCCCceEEEEEeeccCCc-ccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 7 INRSASVAFAPD-APYMAAGTMAGAVDLSFSSSANLEIFKLDFQSED-RDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 7 ~~~V~~vafSpd-g~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~-~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
...|.|++|+|. ..+||.|..+|.| .+||+...... ..........|...|+.+.|..+.. +
T Consensus 242 ~s~v~~~~f~p~~p~ll~gG~y~GqV----------~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~-----~- 305 (555)
T KOG1587|consen 242 PSEVTCLKFCPFDPNLLAGGCYNGQV----------VLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEH-----N- 305 (555)
T ss_pred CCceeEEEeccCCcceEEeeccCceE----------EEEEccCCCCCCCcccccccccCCcCeEEEEEeccCC-----C-
Confidence 467899999995 4678888888877 78998876653 1222244567899999999988642 1
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec------cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS------RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE 158 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~------~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~ 158 (719)
.-+++++.||.|..|+++......++ ....... .....+++++|.+.+.+.|++|+.+|.|..-+......
T Consensus 306 ~~f~s~ssDG~i~~W~~~~l~~P~e~---~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~ 382 (555)
T KOG1587|consen 306 TEFFSLSSDGSICSWDTDMLSLPVEG---LLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTP 382 (555)
T ss_pred CceEEEecCCcEeeeeccccccchhh---cccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcc
Confidence 35888888999999998644321111 1111111 22346889999998899999999999998743332222
Q ss_pred CC-ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC-CCceeEEecCCCCCceeEEEECCCCCcEEEEE
Q 046451 159 PS-HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK-KQKPVISFSESIKRRCSVLQWNPDVATQLVVA 236 (719)
Q Consensus 159 ~~-~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~-~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~ 236 (719)
.. ...........|.+.|+++.++|-+..+|++++ |-+++||... ...++..+. .+...+++++|||....+|+++
T Consensus 383 ~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~-~~~~~v~~vaWSptrpavF~~~ 460 (555)
T KOG1587|consen 383 APEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLD-SSPDYVTDVAWSPTRPAVFATV 460 (555)
T ss_pred cccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhh-hccceeeeeEEcCcCceEEEEE
Confidence 11 111122234568889999999999876666666 8999999988 667777776 5667799999999998889999
Q ss_pred eCCCCCCcEEEEecCCC-CCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC
Q 046451 237 SDEDSSPALRLWDMRNT-MSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 237 s~d~~~~~I~lwDl~~~-~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~ 296 (719)
..+| .|.|||+... ..++.+..-+......+.|++ .+.+|++|...|.|++|++..
T Consensus 461 d~~G---~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~-~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 461 DGDG---NLDIWDLLQDDEEPVLSQKVCSPALTRVRWSP-NGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred cCCC---ceehhhhhccccCCcccccccccccceeecCC-CCcEEEEecCCCcEEEEEcCc
Confidence 9888 8999999653 345555555566677888888 899999999999999999953
No 183
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.74 E-value=3.1e-16 Score=152.75 Aligned_cols=232 Identities=13% Similarity=0.152 Sum_probs=175.4
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
...|+|.+|+.|+..+|++..+.. +.||.......-.. ......|...|++|+|++.. +.
T Consensus 10 ~~pitchAwn~drt~iAv~~~~~e----------vhiy~~~~~~~w~~--~htls~Hd~~vtgvdWap~s--------nr 69 (361)
T KOG1523|consen 10 LEPITCHAWNSDRTQIAVSPNNHE----------VHIYSMLGADLWEP--AHTLSEHDKIVTGVDWAPKS--------NR 69 (361)
T ss_pred cCceeeeeecCCCceEEeccCCce----------EEEEEecCCCCcee--ceehhhhCcceeEEeecCCC--------Cc
Confidence 467999999999999999965554 47888775442211 23446799999999999997 79
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCcc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~ 166 (719)
|++|+.|..-+||.. .++..++....+..++..++++.|+| .++.||+|+.-..|.||-++..+..-. -+
T Consensus 70 Ivtcs~drnayVw~~------~~~~~WkptlvLlRiNrAAt~V~WsP-~enkFAVgSgar~isVcy~E~ENdWWV---sK 139 (361)
T KOG1523|consen 70 IVTCSHDRNAYVWTQ------PSGGTWKPTLVLLRINRAATCVKWSP-KENKFAVGSGARLISVCYYEQENDWWV---SK 139 (361)
T ss_pred eeEccCCCCcccccc------CCCCeeccceeEEEeccceeeEeecC-cCceEEeccCccEEEEEEEecccceeh---hh
Confidence 999999999999997 45666677788888999999999999 889999999999999999987765533 12
Q ss_pred CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC-----C-------------CceeEEecCCCCCceeEEEECCC
Q 046451 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK-----K-------------QKPVISFSESIKRRCSVLQWNPD 228 (719)
Q Consensus 167 ~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~-----~-------------~~~~~~~~~~~~~~i~~l~~sp~ 228 (719)
...+.+++.|++++|++++ -+|++|+.|+.++||..- . |+.+.++. ...+.+..+.|+++
T Consensus 140 hikkPirStv~sldWhpnn-VLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~-~~ggwvh~v~fs~s 217 (361)
T KOG1523|consen 140 HIKKPIRSTVTSLDWHPNN-VLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEAS-SSGGWVHGVLFSPS 217 (361)
T ss_pred hhCCccccceeeeeccCCc-ceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhc-cCCCceeeeEeCCC
Confidence 2223467799999999996 689999999999998642 1 12233443 46788999999999
Q ss_pred CCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCC
Q 046451 229 VATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCP 274 (719)
Q Consensus 229 g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp 274 (719)
|. .|+-.+.|. ++.+-|.....+.+.......-+..++.|-.
T Consensus 218 G~-~lawv~Hds---~v~~~da~~p~~~v~~~~~~~lP~ls~~~is 259 (361)
T KOG1523|consen 218 GN-RLAWVGHDS---TVSFVDAAGPSERVQSVATAQLPLLSVSWIS 259 (361)
T ss_pred CC-EeeEecCCC---ceEEeecCCCchhccchhhccCCceeeEeec
Confidence 95 566667776 8999998665433333332334556666653
No 184
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=4.2e-17 Score=169.64 Aligned_cols=273 Identities=18% Similarity=0.255 Sum_probs=196.1
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeec---cCCcccceeecccCCCCCceeeeecCCCCCCC
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDF---QSEDRDLLLVGESPSSERFNRLAWGKNGSGSE 80 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~---~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~ 80 (719)
+.|.+.|..++|.+....|++++.||.+ ++|++.. ........+.....|.+.|.|++...++
T Consensus 291 ~s~~d~ir~l~~~~sep~lit~sed~~l----------k~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~---- 356 (577)
T KOG0642|consen 291 RSHDDCIRALAFHPSEPVLITASEDGTL----------KLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNG---- 356 (577)
T ss_pred ecchhhhhhhhcCCCCCeEEEeccccch----------hhhhhcccCCccccceeeeEEEecccCceEEEEecCCc----
Confidence 3467889999999999999999888877 6777722 1111222335567899999999999998
Q ss_pred CCccceEEEEcCCCcEEEEcCCccccCCCC-CCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCC
Q 046451 81 DFSLGLVAGGLVDGSIDIWNPLSLISSGET-GGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEP 159 (719)
Q Consensus 81 ~~~~~~lasgs~dg~I~lwd~~~~~~~~~~-~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~ 159 (719)
..+++|+.||+|+.|++-......+. ........+.+|.+.|+.++++. ....|++|+.||+|++|+......
T Consensus 357 ----~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~-~~~~Llscs~DgTvr~w~~~~~~~- 430 (577)
T KOG0642|consen 357 ----EHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSS-TKDRLLSCSSDGTVRLWEPTEESP- 430 (577)
T ss_pred ----eEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecc-cccceeeecCCceEEeeccCCcCc-
Confidence 79999999999999976422111111 11144567889999999999999 678899999999999999876654
Q ss_pred CccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC------CCCCceeEEEECCCCCcEE
Q 046451 160 SHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE------SIKRRCSVLQWNPDVATQL 233 (719)
Q Consensus 160 ~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~------~~~~~i~~l~~sp~g~~~l 233 (719)
.+|...+ ..+.-.++++-.......++....+.-.++|++....+..+.. .....+..+.+++.+ -+.
T Consensus 431 ~~f~~~~-----e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~-~~~ 504 (577)
T KOG0642|consen 431 CTFGEPK-----EHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTA-DIT 504 (577)
T ss_pred cccCCcc-----ccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCC-Cee
Confidence 2321111 1223345555443212233333334444555555544444432 122457788899988 478
Q ss_pred EEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC
Q 046451 234 VVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT 307 (719)
Q Consensus 234 ~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~ 307 (719)
+++..+. .|+++|..++ +++.....|...++++++.+ ++-+|++++.||.+++|.+....++.....|.
T Consensus 505 ~~~hed~---~Ir~~dn~~~-~~l~s~~a~~~svtslai~~-ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r 573 (577)
T KOG0642|consen 505 FTAHEDR---SIRFFDNKTG-KILHSMVAHKDSVTSLAIDP-NGPYLMSGSHDGSVRLWKLDVKTCVLESTAHR 573 (577)
T ss_pred EecccCC---ceeccccccc-ccchheeeccceecceeecC-CCceEEeecCCceeehhhccchheeecccccc
Confidence 8888887 8999999775 78888899999999999999 99999999999999999998888877766654
No 185
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.74 E-value=1e-15 Score=167.41 Aligned_cols=301 Identities=15% Similarity=0.170 Sum_probs=205.3
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
|.--++|+++||+++++|+|..||.|.+|..... ...........-|...|++++|+.+| .
T Consensus 204 Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~-----------~~~~~t~t~lHWH~~~V~~L~fS~~G--------~ 264 (792)
T KOG1963|consen 204 HTFNITCVALSPNERYLAAGDSDGRILVWRDFGS-----------SDDSETCTLLHWHHDEVNSLSFSSDG--------A 264 (792)
T ss_pred hcccceeEEeccccceEEEeccCCcEEEEecccc-----------ccccccceEEEecccccceeEEecCC--------c
Confidence 3334789999999999999999998855432211 11122222234478899999999999 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|++|+..|.+.+|.++ ++ + .+-|..-.+.|..+.+++ |+++.+....|+.|.+....+......+.-+
T Consensus 265 ~LlSGG~E~VLv~Wq~~------T~---~-kqfLPRLgs~I~~i~vS~-ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi 333 (792)
T KOG1963|consen 265 YLLSGGREGVLVLWQLE------TG---K-KQFLPRLGSPILHIVVSP-DSDLYSLVLEDNQIHLIKASDLEIKSTISGI 333 (792)
T ss_pred eEeecccceEEEEEeec------CC---C-cccccccCCeeEEEEEcC-CCCeEEEEecCceEEEEeccchhhhhhccCc
Confidence 99999999999999984 33 2 334455678999999998 8888888899999999987665544443222
Q ss_pred cCC----CCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC----C------CCCceeEEEECCCCCc
Q 046451 166 RGN----GSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE----S------IKRRCSVLQWNPDVAT 231 (719)
Q Consensus 166 ~~~----~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~----~------~~~~i~~l~~sp~g~~ 231 (719)
... .....+-.+.++++|.- +.++-.+..|.|.+||+-+.+.+..+.. . +...++.++.+-.| .
T Consensus 334 ~~~~~~~k~~~~~l~t~~~idpr~-~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~g-s 411 (792)
T KOG1963|consen 334 KPPTPSTKTRPQSLTTGVSIDPRT-NSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFG-S 411 (792)
T ss_pred cCCCccccccccccceeEEEcCCC-CceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccc-e
Confidence 221 22235567788999953 5788889999999999988776655432 1 12345666666665 3
Q ss_pred EEEEEeCC-------CCCCcEEEEecCCCCC--ce--EEeeCCCCCeeEEEeCCCCC-CeEEEEeCCCcEEEEECCCC--
Q 046451 232 QLVVASDE-------DSSPALRLWDMRNTMS--PV--KEFVGHTKGVIAMSWCPNDS-SYLLTCAKDNRTICWDTVSG-- 297 (719)
Q Consensus 232 ~l~~~s~d-------~~~~~I~lwDl~~~~~--~~--~~~~~h~~~V~~v~~sp~d~-~~l~sgs~Dg~I~iwd~~~~-- 297 (719)
++++.-.. ++...+++|-.....+ .+ +...-|...+...+|.+.-. ..+++++.||.++||-+.+.
T Consensus 412 ~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n 491 (792)
T KOG1963|consen 412 WMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSN 491 (792)
T ss_pred EEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccc
Confidence 45444211 1123688887643321 11 22345777666666554233 38999999999999977322
Q ss_pred --------eEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 046451 298 --------EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 298 --------~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~ 340 (719)
.+...-..|...+..++|+.|| -+++++.|++|.|||..+.
T Consensus 492 ~~k~~s~W~c~~i~sy~k~~i~a~~fs~dG--slla~s~~~~Itiwd~~~~ 540 (792)
T KOG1963|consen 492 IYKKSSNWTCKAIGSYHKTPITALCFSQDG--SLLAVSFDDTITIWDYDTK 540 (792)
T ss_pred cCcCccceEEeeeeccccCcccchhhcCCC--cEEEEecCCEEEEecCCCh
Confidence 2222223477889999999999 4555666999999999994
No 186
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.74 E-value=3e-16 Score=154.06 Aligned_cols=276 Identities=16% Similarity=0.281 Sum_probs=194.2
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC-CCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF-TPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~-~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
..+|++...|.|++||. .++ ..+..++++...++.+.|... ..+.+.+|+.||+|++||++.......+.
T Consensus 41 ~~vav~lSngsv~lyd~------~tg---~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~ 111 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDK------GTG---QLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARIS 111 (376)
T ss_pred eeEEEEecCCeEEEEec------cch---hhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhhee
Confidence 57899999999999999 556 788899999999999999764 46789999999999999999887765531
Q ss_pred CccCCCCCCC-CCeEEEEecCCCCcEEEEEeC----CCcEEEEECCCCce-eEEecCCCCCceeEEEECCCCCcEEEEEe
Q 046451 164 PLRGNGSAAQ-GEISFVSWNSKVQHILASTSY----NGTTVVWDLKKQKP-VISFSESIKRRCSVLQWNPDVATQLVVAS 237 (719)
Q Consensus 164 ~l~~~~~~h~-~~I~~l~~sp~g~~~l~s~s~----dg~I~iwd~~~~~~-~~~~~~~~~~~i~~l~~sp~g~~~l~~~s 237 (719)
. ..+. ....+++.+-++ +++++|++ +-.|.+||+|..+. +..+...|...|+++.|+|....+|++|+
T Consensus 112 --~---~~~~~~~f~~ld~nck~-~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGS 185 (376)
T KOG1188|consen 112 --W---TQQSGTPFICLDLNCKK-NIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGS 185 (376)
T ss_pred --c---cCCCCCcceEeeccCcC-CeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeec
Confidence 1 1122 356677776564 57777754 67899999999876 77777799999999999999999999999
Q ss_pred CCCCCCcEEEEecCCCCC--ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCC---------
Q 046451 238 DEDSSPALRLWDMRNTMS--PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAG--------- 306 (719)
Q Consensus 238 ~d~~~~~I~lwDl~~~~~--~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h--------- 306 (719)
.|| .|.|||++...+ .+.....|...|.++.|....-+.|.+-+..+...+|+++.+.....+...
T Consensus 186 vDG---LvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~ 262 (376)
T KOG1188|consen 186 VDG---LVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRK 262 (376)
T ss_pred ccc---eEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHh
Confidence 999 999999975432 233334577789999999734457889999999999999988765444321
Q ss_pred ---CCCeEEeEEcCCCCCEEEEEeC-CCcEEEEeCC---CCcccccCCCCCCC---CCccCcceec-CCCceeeeeCCcE
Q 046451 307 ---TNWNFDIHWYPKIPGVISASSF-DGKIGIYNIE---GCSRYGVGDSNFSA---APLRAPKWYK-RPAGASFGFGGKL 375 (719)
Q Consensus 307 ---~~~v~~l~~spdg~~~las~s~-Dg~I~iwd~~---~~~~~~~~~~~~~~---~~~~~p~w~~-~~~~~s~s~~Gkl 375 (719)
...+-.. .++.+..+++.++. -++..++-+. ++.... ....+.. ..++...|.. +....+.|-||.+
T Consensus 263 ~~~~dY~I~~-~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~-~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l 340 (376)
T KOG1188|consen 263 EDNCDYVINE-HSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLT-EPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLL 340 (376)
T ss_pred hhhhhheeec-ccCCCcceEEEeccccCceeEEEeeecccccccC-ccccccCCcHHHHHHHhhhcccceeeccCCCceE
Confidence 1112222 22333345555544 4566665554 232222 1111111 1123333332 2355677889999
Q ss_pred EEEcc
Q 046451 376 VSFHP 380 (719)
Q Consensus 376 v~~~~ 380 (719)
.+|..
T Consensus 341 ~~Wk~ 345 (376)
T KOG1188|consen 341 QAWKV 345 (376)
T ss_pred EEEec
Confidence 99984
No 187
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.74 E-value=1.2e-15 Score=151.44 Aligned_cols=241 Identities=18% Similarity=0.226 Sum_probs=177.6
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEe
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA 143 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs 143 (719)
...++.+.|+.+. ..|..|+.|| .++|+.+.. ............|..+-|+. .++|..+
T Consensus 5 ~~ti~~~~~Nqd~--------~~lsvGs~~G-yk~~~~~~~---------~k~~~~~~~~~~IvEmLFSS---SLvaiV~ 63 (391)
T KOG2110|consen 5 KPTINFIGFNQDS--------TLLSVGSKDG-YKIFSCSPF---------EKCFSKDTEGVSIVEMLFSS---SLVAIVS 63 (391)
T ss_pred Ccceeeeeeccce--------eEEEccCCCc-eeEEecCch---------HHhhcccCCCeEEEEeeccc---ceeEEEe
Confidence 3456677788887 6888888887 577776321 11111122233556666754 6776666
Q ss_pred CCC--cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCC--CCCc
Q 046451 144 DDG--EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSES--IKRR 219 (719)
Q Consensus 144 ~dg--~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~--~~~~ 219 (719)
.+. .+++++++....+..+ .....|.++.++.+ .|+++-.+ .|+|||+++.+.+.++... +...
T Consensus 64 ~~qpr~Lkv~~~Kk~~~ICe~--------~fpt~IL~VrmNr~---RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~g 131 (391)
T KOG2110|consen 64 IKQPRKLKVVHFKKKTTICEI--------FFPTSILAVRMNRK---RLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKG 131 (391)
T ss_pred cCCCceEEEEEcccCceEEEE--------ecCCceEEEEEccc---eEEEEEcc-cEEEEecccceeehhhhccCCCccc
Confidence 554 4889988876655442 13447999999876 45555544 4999999999999988853 4455
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCc-EEEEECCCCe
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR-TICWDTVSGE 298 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~-I~iwd~~~~~ 298 (719)
+..++++.++.++.+-++.+ .|.|.|||+.+. ..+..+..|.+.+.+++|++ +|.+|||+++.|+ ||||.+.+|+
T Consensus 132 l~AlS~n~~n~ylAyp~s~t--~GdV~l~d~~nl-~~v~~I~aH~~~lAalafs~-~G~llATASeKGTVIRVf~v~~G~ 207 (391)
T KOG2110|consen 132 LCALSPNNANCYLAYPGSTT--SGDVVLFDTINL-QPVNTINAHKGPLAALAFSP-DGTLLATASEKGTVIRVFSVPEGQ 207 (391)
T ss_pred eEeeccCCCCceEEecCCCC--CceEEEEEcccc-eeeeEEEecCCceeEEEECC-CCCEEEEeccCceEEEEEEcCCcc
Confidence 66666666654433333333 468999999875 67888999999999999999 9999999999997 5899999999
Q ss_pred EEEEecCCC--CCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 299 IVSELPAGT--NWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 299 ~~~~l~~h~--~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
.+.+|+-.. ..|.+++|++++ .+|++.|..++|+||.++....
T Consensus 208 kl~eFRRG~~~~~IySL~Fs~ds-~~L~~sS~TeTVHiFKL~~~~~ 252 (391)
T KOG2110|consen 208 KLYEFRRGTYPVSIYSLSFSPDS-QFLAASSNTETVHIFKLEKVSN 252 (391)
T ss_pred EeeeeeCCceeeEEEEEEECCCC-CeEEEecCCCeEEEEEeccccc
Confidence 999997644 368999999999 7999999999999999998764
No 188
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.73 E-value=2e-16 Score=158.47 Aligned_cols=293 Identities=18% Similarity=0.276 Sum_probs=199.7
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasg 142 (719)
....|..+.|..+.. +.|++|+.|..|+||.+........+..-+....|..|...|+++.|++ ++++|++|
T Consensus 12 ~~~pv~s~dfq~n~~-------~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p-~gelLASg 83 (434)
T KOG1009|consen 12 DHEPVYSVDFQKNSL-------NKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSP-DGELLASG 83 (434)
T ss_pred CCCceEEEEeccCcc-------cceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcC-CcCeeeec
Confidence 457788999998873 5999999999999999865443221112245567889999999999999 89999999
Q ss_pred eCCCcEEEEcCCCCCC------C---CccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec
Q 046451 143 ADDGEICIWDLSAPAE------P---SHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS 213 (719)
Q Consensus 143 s~dg~I~iwdl~~~~~------~---~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~ 213 (719)
+++|.|.+|....-.. . ...-..+....+|...|..++|++++ +++++++.|..+++||+..|+.+..+.
T Consensus 84 ~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~-~~l~s~s~dns~~l~Dv~~G~l~~~~~ 162 (434)
T KOG1009|consen 84 GDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDS-NFLVSGSVDNSVRLWDVHAGQLLAILD 162 (434)
T ss_pred CCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCC-ceeeeeeccceEEEEEeccceeEeecc
Confidence 9999999997662100 0 00000222345588999999999997 699999999999999999999998888
Q ss_pred CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC--------------------ceEEeeCCC----CCeeE
Q 046451 214 ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS--------------------PVKEFVGHT----KGVIA 269 (719)
Q Consensus 214 ~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~--------------------~~~~~~~h~----~~V~~ 269 (719)
.|...+..++|.|.+. ++++-+.|. ..+.+++..... ..+.+ |. .-...
T Consensus 163 -dh~~yvqgvawDpl~q-yv~s~s~dr---~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLf--hDeTlksFFrR 235 (434)
T KOG1009|consen 163 -DHEHYVQGVAWDPLNQ-YVASKSSDR---HPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLF--HDETLKSFFRR 235 (434)
T ss_pred -ccccccceeecchhhh-hhhhhccCc---ccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeee--ecCchhhhhhh
Confidence 8999999999999974 566666665 345554432110 00111 11 12356
Q ss_pred EEeCCCCCCeEEEEeC----C-----CcEEEEECCC-CeEEEEecCCCCCeEEeEEcCC-----------------CCCE
Q 046451 270 MSWCPNDSSYLLTCAK----D-----NRTICWDTVS-GEIVSELPAGTNWNFDIHWYPK-----------------IPGV 322 (719)
Q Consensus 270 v~~sp~d~~~l~sgs~----D-----g~I~iwd~~~-~~~~~~l~~h~~~v~~l~~spd-----------------g~~~ 322 (719)
++|+| +|.+|++... + +..++|+-.. .+....+..-...+..+.|+|- ...+
T Consensus 236 lsfTP-dG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlv 314 (434)
T KOG1009|consen 236 LSFTP-DGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLV 314 (434)
T ss_pred cccCC-CCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceE
Confidence 78999 8888887642 2 2334554332 2344445554444555555441 1134
Q ss_pred EEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCC
Q 046451 323 ISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 323 las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
+|.++ .+.|.|||.+....+.....- .+...+.++|+.||.+++++..++
T Consensus 315 faiAt-~~svyvydtq~~~P~~~v~ni----------hy~~iTDiaws~dg~~l~vSS~DG 364 (434)
T KOG1009|consen 315 FAIAT-KNSVYVYDTQTLEPLAVVDNI----------HYSAITDIAWSDDGSVLLVSSTDG 364 (434)
T ss_pred EEEee-cceEEEeccccccceEEEeee----------eeeeecceeecCCCcEEEEeccCC
Confidence 55555 668999999998776522111 233456788999999888887776
No 189
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.72 E-value=1e-16 Score=167.61 Aligned_cols=243 Identities=19% Similarity=0.256 Sum_probs=185.0
Q ss_pred EcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCC
Q 046451 90 GLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNG 169 (719)
Q Consensus 90 gs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~ 169 (719)
.+..|.|.||++.......++ .+-.+. ....|+++.|+|+|...|++++.||.|++|.+..+........-....
T Consensus 599 ~g~gG~iai~el~~PGrLPDg----v~p~l~-Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~l 673 (1012)
T KOG1445|consen 599 AGSGGVIAIYELNEPGRLPDG----VMPGLF-NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKIL 673 (1012)
T ss_pred cCCCceEEEEEcCCCCCCCcc----cccccc-cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceee
Confidence 455789999999643221222 122222 346799999999999999999999999999998876555443345556
Q ss_pred CCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEe
Q 046451 170 SAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWD 249 (719)
Q Consensus 170 ~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwD 249 (719)
..|.+.|+++.|+|-...+|+++++|.+|++||+++.+....+. +|.+.|..++|+++| .++++.+.|+ +|++|+
T Consensus 674 t~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~-gHtdqIf~~AWSpdG-r~~AtVcKDg---~~rVy~ 748 (1012)
T KOG1445|consen 674 TIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLV-GHTDQIFGIAWSPDG-RRIATVCKDG---TLRVYE 748 (1012)
T ss_pred ecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheec-cCcCceeEEEECCCC-cceeeeecCc---eEEEeC
Confidence 77899999999999877899999999999999999999988888 899999999999999 5788988888 999999
Q ss_pred cCCCCCceEEeeCCCC-CeeEEEeCCCCCCeEEEEeCC----CcEEEEECCCC--eEEEEe--cCCCCCeEEeEEcCCCC
Q 046451 250 MRNTMSPVKEFVGHTK-GVIAMSWCPNDSSYLLTCAKD----NRTICWDTVSG--EIVSEL--PAGTNWNFDIHWYPKIP 320 (719)
Q Consensus 250 l~~~~~~~~~~~~h~~-~V~~v~~sp~d~~~l~sgs~D----g~I~iwd~~~~--~~~~~l--~~h~~~v~~l~~spdg~ 320 (719)
-+....++.+-.+-.+ .-..|.|.- |++++++.+.| ..|.+||..+- ..+.+. +... .+.--.+.+|..
T Consensus 749 Prs~e~pv~Eg~gpvgtRgARi~wac-dgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvap-s~LvP~YD~Ds~ 826 (1012)
T KOG1445|consen 749 PRSREQPVYEGKGPVGTRGARILWAC-DGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAP-SPLVPHYDYDSN 826 (1012)
T ss_pred CCCCCCccccCCCCccCcceeEEEEe-cCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccC-ccccccccCCCc
Confidence 9988777776554322 334577776 88888888766 46889987653 233332 2111 133335666776
Q ss_pred CEEEEEeCCCcEEEEeCCCCcccc
Q 046451 321 GVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 321 ~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
.++++|-.|..|.+|.+-..+.+.
T Consensus 827 ~lfltGKGD~~v~~yEv~~esPy~ 850 (1012)
T KOG1445|consen 827 VLFLTGKGDRFVNMYEVIYESPYL 850 (1012)
T ss_pred eEEEecCCCceEEEEEecCCCcee
Confidence 788999999999999998777654
No 190
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.72 E-value=2.9e-15 Score=140.53 Aligned_cols=250 Identities=17% Similarity=0.230 Sum_probs=181.6
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccC-CCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEe
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISS-GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA 143 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~-~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs 143 (719)
..|.+-+|+|.+ ++|+.|+.+|.|.++.+.+.... ....++..+...+.|.++|+.++|. .++|++|+
T Consensus 11 ~tvf~qa~sp~~--------~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~---d~~Lls~g 79 (325)
T KOG0649|consen 11 NTVFAQAISPSK--------QYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH---DDFLLSGG 79 (325)
T ss_pred HHHHHHhhCCcc--------eEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee---hhheeecc
Confidence 456677899987 89999999999999999766543 2233445666778999999999996 35677766
Q ss_pred CCCcEEEEcCCCCCCCC-------ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCC
Q 046451 144 DDGEICIWDLSAPAEPS-------HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESI 216 (719)
Q Consensus 144 ~dg~I~iwdl~~~~~~~-------~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~ 216 (719)
. |.|+-|..+...... ...+.+. ....--+|+++...|.. +-++.++.|+.++.||+++|+..+++. +|
T Consensus 80 d-G~V~gw~W~E~~es~~~K~lwe~~~P~~~-~~~evPeINam~ldP~e-nSi~~AgGD~~~y~~dlE~G~i~r~~r-GH 155 (325)
T KOG0649|consen 80 D-GLVYGWEWNEEEESLATKRLWEVKIPMQV-DAVEVPEINAMWLDPSE-NSILFAGGDGVIYQVDLEDGRIQREYR-GH 155 (325)
T ss_pred C-ceEEEeeehhhhhhccchhhhhhcCcccc-CcccCCccceeEeccCC-CcEEEecCCeEEEEEEecCCEEEEEEc-CC
Confidence 5 999999876543311 1111111 01122378999999875 455566689999999999999999999 99
Q ss_pred CCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC----------CCCCeeEEEeCCCCCCeEEEEeCC
Q 046451 217 KRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG----------HTKGVIAMSWCPNDSSYLLTCAKD 286 (719)
Q Consensus 217 ~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~----------h~~~V~~v~~sp~d~~~l~sgs~D 286 (719)
...+.++.--... ..+++|+.|| ++++||+++. +.+..+.. ...+|.+++. +.++|++|+ .
T Consensus 156 tDYvH~vv~R~~~-~qilsG~EDG---tvRvWd~kt~-k~v~~ie~yk~~~~lRp~~g~wigala~---~edWlvCGg-G 226 (325)
T KOG0649|consen 156 TDYVHSVVGRNAN-GQILSGAEDG---TVRVWDTKTQ-KHVSMIEPYKNPNLLRPDWGKWIGALAV---NEDWLVCGG-G 226 (325)
T ss_pred cceeeeeeecccC-cceeecCCCc---cEEEEecccc-ceeEEeccccChhhcCcccCceeEEEec---cCceEEecC-C
Confidence 9999999884333 3699999998 9999999986 44444421 1245667765 456777665 4
Q ss_pred CcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 287 NRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 287 g~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
-.+.+|++++.+....|.-. ..+..+.|..| .+++++..+.|.-|.+.+-..
T Consensus 227 p~lslwhLrsse~t~vfpip-a~v~~v~F~~d---~vl~~G~g~~v~~~~l~Gvl~ 278 (325)
T KOG0649|consen 227 PKLSLWHLRSSESTCVFPIP-ARVHLVDFVDD---CVLIGGEGNHVQSYTLNGVLQ 278 (325)
T ss_pred CceeEEeccCCCceEEEecc-cceeEeeeecc---eEEEeccccceeeeeeccEEE
Confidence 57899999999888777543 33778888865 577777788999998876443
No 191
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.72 E-value=1.9e-14 Score=156.14 Aligned_cols=285 Identities=28% Similarity=0.524 Sum_probs=212.0
Q ss_pred cccCccceEEEcCCCCeEEEeec-cceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTM-AGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~-dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
.+...|.+++|++++++++.++. ++.+ ++|++....... ....|...|.+++|++++.
T Consensus 153 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~------ 211 (466)
T COG2319 153 GHSESVTSLAFSPDGKLLASGSSLDGTI----------KLWDLRTGKPLS-----TLAGHTDPVSSLAFSPDGG------ 211 (466)
T ss_pred cCcccEEEEEECCCCCEEEecCCCCCce----------EEEEcCCCceEE-----eeccCCCceEEEEEcCCcc------
Confidence 35577889999999998888864 5554 889887522222 2233889999999998762
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCcee-eeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC-CCc
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIA-HLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE-PSH 161 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~-~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~-~~~ 161 (719)
.++++++.|+.|++||. ..+ ..+. .+..|...+ ...|++ ++.++++++.|+.+++||+..... ...
T Consensus 212 -~~~~~~~~d~~i~~wd~------~~~---~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 279 (466)
T COG2319 212 -LLIASGSSDGTIRLWDL------STG---KLLRSTLSGHSDSV-VSSFSP-DGSLLASGSSDGTIRLWDLRSSSSLLRT 279 (466)
T ss_pred -eEEEEecCCCcEEEEEC------CCC---cEEeeecCCCCcce-eEeECC-CCCEEEEecCCCcEEEeeecCCCcEEEE
Confidence 25556699999999987 323 4555 577888775 448988 558888999999999999987665 111
Q ss_pred cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec-CCCCCceeEEEECCCCCcEEEEE-eCC
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS-ESIKRRCSVLQWNPDVATQLVVA-SDE 239 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~-~~~~~~i~~l~~sp~g~~~l~~~-s~d 239 (719)
+ ..|...|.++.|++++. .+++++.|+.+.+||+++........ ..+...+..+.|.+++ ..++.+ ..+
T Consensus 280 ---~----~~~~~~v~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d 350 (466)
T COG2319 280 ---L----SGHSSSVLSVAFSPDGK-LLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDG-SLLVSGGSDD 350 (466)
T ss_pred ---E----ecCCccEEEEEECCCCC-EEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCC-CEEEEeecCC
Confidence 1 34677999999999764 66668888999999998877655543 2466678999994232 345544 455
Q ss_pred CCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEE-EeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCC
Q 046451 240 DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLT-CAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPK 318 (719)
Q Consensus 240 ~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~s-gs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spd 318 (719)
+ .+.+|++.... ......... .+..+.+++ + ..++. +..++.+.+|+.........+..+...+..+.++++
T Consensus 351 ~---~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (466)
T COG2319 351 G---TIRLWDLRTGK-PLKTLEGHS-NVLSVSFSP-D-GRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPD 423 (466)
T ss_pred C---cEEeeecCCCc-eeEEecCCc-eEEEEEECC-C-CCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCC
Confidence 4 89999998764 223232222 288999998 7 66665 889999999999998888777665366999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCC
Q 046451 319 IPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 319 g~~~las~s~Dg~I~iwd~~~ 339 (719)
+ ..+++++.++.+++|++.+
T Consensus 424 ~-~~~~~~~~~~~~~~~~~~~ 443 (466)
T COG2319 424 G-KSLASGSSDNTIRLWDLKT 443 (466)
T ss_pred C-cEEEEecCCCcEEEEeccC
Confidence 8 7888889999999999998
No 192
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.71 E-value=4e-16 Score=154.89 Aligned_cols=256 Identities=15% Similarity=0.230 Sum_probs=192.9
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec-cccCCEEEEEEeCCCCCE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS-RHKGPVRGLEFNSFTPNL 138 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~fsp~~~~~ 138 (719)
..+|.+.|++|.|+.++ ++|++|+.|..++||+++...-.... +.+.... .|...|.||+|+. ...+
T Consensus 52 ~~~H~GCiNAlqFS~N~--------~~L~SGGDD~~~~~W~~de~~~~k~~---KPI~~~~~~H~SNIF~L~F~~-~N~~ 119 (609)
T KOG4227|consen 52 VREHTGCINALQFSHND--------RFLASGGDDMHGRVWNVDELMVRKTP---KPIGVMEHPHRSNIFSLEFDL-ENRF 119 (609)
T ss_pred hhhhccccceeeeccCC--------eEEeecCCcceeeeechHHHHhhcCC---CCceeccCccccceEEEEEcc-CCee
Confidence 35789999999999997 89999999999999998654332222 3444333 3568999999998 7789
Q ss_pred EEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc-eeEEe-cCCC
Q 046451 139 LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK-PVISF-SESI 216 (719)
Q Consensus 139 lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~-~~~~~-~~~~ 216 (719)
|++|..+++|.+.|+++.+.+..+ ......+.|..+..+|.+ ++|++.+.+|.|.+||++... .+.-+ ....
T Consensus 120 ~~SG~~~~~VI~HDiEt~qsi~V~-----~~~~~~~~VY~m~~~P~D-N~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~ 193 (609)
T KOG4227|consen 120 LYSGERWGTVIKHDIETKQSIYVA-----NENNNRGDVYHMDQHPTD-NTLIVVTRAKLVSFIDNRDRQNPISLVLPANS 193 (609)
T ss_pred EecCCCcceeEeeecccceeeeee-----cccCcccceeecccCCCC-ceEEEEecCceEEEEeccCCCCCCceeeecCC
Confidence 999999999999999998776543 122345689999999995 799999999999999998765 22211 1145
Q ss_pred CCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC------CCCCeeEEEeCCCCCCeEEEEeCCCcEE
Q 046451 217 KRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG------HTKGVIAMSWCPNDSSYLLTCAKDNRTI 290 (719)
Q Consensus 217 ~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~------h~~~V~~v~~sp~d~~~l~sgs~Dg~I~ 290 (719)
......+.|+|....+|++.+..+ -+.+||.+....++....+ ....-.++.|++ +|+.|++--....-.
T Consensus 194 ~~~F~t~~F~P~~P~Li~~~~~~~---G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~-~G~Q~msiRR~~~P~ 269 (609)
T KOG4227|consen 194 GKNFYTAEFHPETPALILVNSETG---GPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSP-SGNQFMSIRRGKCPL 269 (609)
T ss_pred CccceeeeecCCCceeEEeccccC---CCCceeeccccchHHhhhccccCcccchhhhheeeCC-CCCeehhhhccCCCE
Confidence 667889999999988999988887 6999999876554433222 122346788999 778787776666777
Q ss_pred EEECCCCeE-EEEecCCC-------CCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 046451 291 CWDTVSGEI-VSELPAGT-------NWNFDIHWYPKIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 291 iwd~~~~~~-~~~l~~h~-------~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~ 340 (719)
+||+.+..+ +..+. |+ ..+.+++|..|. -+++|+.+-.|+||.+...
T Consensus 270 ~~D~~S~R~~V~k~D-~N~~GY~N~~T~KS~~F~~D~--~v~tGSD~~~i~~WklP~~ 324 (609)
T KOG4227|consen 270 YFDFISQRCFVLKSD-HNPNGYCNIKTIKSMTFIDDY--TVATGSDHWGIHIWKLPRA 324 (609)
T ss_pred EeeeecccceeEecc-CCCCcceeeeeeeeeeeecce--eeeccCcccceEEEecCCC
Confidence 889877443 33333 22 256778888775 6999999999999998653
No 193
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.71 E-value=5.8e-16 Score=162.95 Aligned_cols=268 Identities=17% Similarity=0.256 Sum_probs=198.0
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
..|+.++|-|||. .+++.+ +..+.+||. .++ ..+.++++|++.|.|++|+. |+.++++|+.
T Consensus 13 hci~d~afkPDGs-------qL~lAA--g~rlliyD~------ndG---~llqtLKgHKDtVycVAys~-dGkrFASG~a 73 (1081)
T KOG1538|consen 13 HCINDIAFKPDGT-------QLILAA--GSRLLVYDT------SDG---TLLQPLKGHKDTVYCVAYAK-DGKRFASGSA 73 (1081)
T ss_pred cchheeEECCCCc-------eEEEec--CCEEEEEeC------CCc---ccccccccccceEEEEEEcc-CCceeccCCC
Confidence 3789999999995 455444 457999999 777 89999999999999999999 8999999999
Q ss_pred CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEE
Q 046451 145 DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQ 224 (719)
Q Consensus 145 dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~ 224 (719)
|..|.||+-.-.... + ..|.+.|.|+.|+|-. +.|++|+-+ ..-+|........ ... ...++.+++
T Consensus 74 DK~VI~W~~klEG~L------k---YSH~D~IQCMsFNP~~-h~LasCsLs-dFglWS~~qK~V~-K~k--ss~R~~~Cs 139 (1081)
T KOG1538|consen 74 DKSVIIWTSKLEGIL------K---YSHNDAIQCMSFNPIT-HQLASCSLS-DFGLWSPEQKSVS-KHK--SSSRIICCS 139 (1081)
T ss_pred ceeEEEeccccccee------e---eccCCeeeEeecCchH-HHhhhcchh-hccccChhhhhHH-hhh--hheeEEEee
Confidence 999999986544332 1 2588899999999985 678887764 4678887654333 222 567889999
Q ss_pred ECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEe--eCCCCCeeEEEeCCCCC----CeEEEEeCCCcEEEEECCCCe
Q 046451 225 WNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF--VGHTKGVIAMSWCPNDS----SYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 225 ~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~--~~h~~~V~~v~~sp~d~----~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
|..|| .+++.|-.+| +|.|-+-. +.+.++.- .+..+.|++++|+|+.+ +.+++..+..++.+|.+ +|+
T Consensus 140 WtnDG-qylalG~~nG---TIsiRNk~-gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~L-sG~ 213 (1081)
T KOG1538|consen 140 WTNDG-QYLALGMFNG---TISIRNKN-GEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQL-SGK 213 (1081)
T ss_pred ecCCC-cEEEEeccCc---eEEeecCC-CCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEe-cce
Confidence 99999 5889999888 89888643 22322222 24678999999998433 47888888888888887 677
Q ss_pred EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEE
Q 046451 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSF 378 (719)
Q Consensus 299 ~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~ 378 (719)
.+..-+.-.-...++.+.++| .++..|+.|+.+++|.-++-.+-..++.+.+. |. ++.-++|..++.
T Consensus 214 ~Igk~r~L~FdP~CisYf~NG-Ey~LiGGsdk~L~~fTR~GvrLGTvg~~D~WI-------Wt-----V~~~PNsQ~v~~ 280 (1081)
T KOG1538|consen 214 QIGKDRALNFDPCCISYFTNG-EYILLGGSDKQLSLFTRDGVRLGTVGEQDSWI-------WT-----VQAKPNSQYVVV 280 (1081)
T ss_pred eecccccCCCCchhheeccCC-cEEEEccCCCceEEEeecCeEEeeccccceeE-------EE-----EEEccCCceEEE
Confidence 666444444456789999999 57777888999999988776665544422221 33 445555665555
Q ss_pred ccCCCC
Q 046451 379 HPKSSA 384 (719)
Q Consensus 379 ~~~~~~ 384 (719)
+..++.
T Consensus 281 GCqDGT 286 (1081)
T KOG1538|consen 281 GCQDGT 286 (1081)
T ss_pred EEccCe
Confidence 555543
No 194
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.71 E-value=1.3e-15 Score=153.97 Aligned_cols=202 Identities=16% Similarity=0.228 Sum_probs=156.6
Q ss_pred EEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC
Q 046451 127 RGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ 206 (719)
Q Consensus 127 ~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~ 206 (719)
.+++|+. ++..|++++.||++|||+......+.. ...|..+|.+++|+++| .+|++.+.| ..+||+++++
T Consensus 148 k~vaf~~-~gs~latgg~dg~lRv~~~Ps~~t~l~-------e~~~~~eV~DL~FS~dg-k~lasig~d-~~~VW~~~~g 217 (398)
T KOG0771|consen 148 KVVAFNG-DGSKLATGGTDGTLRVWEWPSMLTILE-------EIAHHAEVKDLDFSPDG-KFLASIGAD-SARVWSVNTG 217 (398)
T ss_pred eEEEEcC-CCCEeeeccccceEEEEecCcchhhhh-------hHhhcCccccceeCCCC-cEEEEecCC-ceEEEEeccC
Confidence 6789998 889999999999999999776654432 23577899999999998 589999999 8999999999
Q ss_pred ceeEEec-CCCCCceeEEEECCCC---CcEEEEEeCCCCCCcEEEEecCCCCC----ceEEeeCCCCCeeEEEeCCCCCC
Q 046451 207 KPVISFS-ESIKRRCSVLQWNPDV---ATQLVVASDEDSSPALRLWDMRNTMS----PVKEFVGHTKGVIAMSWCPNDSS 278 (719)
Q Consensus 207 ~~~~~~~-~~~~~~i~~l~~sp~g---~~~l~~~s~d~~~~~I~lwDl~~~~~----~~~~~~~h~~~V~~v~~sp~d~~ 278 (719)
..+.+.. ......+..+.|+.|+ ..++++....+ +.|++||+..... ..+........|.+++.+. +|+
T Consensus 218 ~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~--~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~-dGk 294 (398)
T KOG0771|consen 218 AALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPG--GGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSD-DGK 294 (398)
T ss_pred chhhhcCCcccchhhhhceecccCCCceEEEEEecCCC--CceeEEEeeeeccccccchhhhhhccCcceeEEEcC-CCc
Confidence 7776655 2455567778888775 22344333333 3677777643322 2222333346899999999 999
Q ss_pred eEEEEeCCCcEEEEECCCCeEEEEec-CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 279 YLLTCAKDNRTICWDTVSGEIVSELP-AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 279 ~l~sgs~Dg~I~iwd~~~~~~~~~l~-~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
+++.|+.||.|.|++..+.+.++.++ .|...|+.+.|+||. +.+++.+.|..+.|..+.-...
T Consensus 295 f~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pds-r~~~svSs~~~~~v~~l~vd~~ 358 (398)
T KOG0771|consen 295 FLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDS-RYLASVSSDNEAAVTKLAVDKT 358 (398)
T ss_pred EEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCc-CcccccccCCceeEEEEeeccc
Confidence 99999999999999999888776654 688999999999998 7888888899999988876433
No 195
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.70 E-value=3.3e-15 Score=167.58 Aligned_cols=302 Identities=19% Similarity=0.269 Sum_probs=203.3
Q ss_pred ccCccceEEEcCC-CCeEEEeeccceeecccCCCceEEEEEeeccCCcc-ccee-ecccCCCCCceeeeecCCCCCCCCC
Q 046451 6 GINRSASVAFAPD-APYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDR-DLLL-VGESPSSERFNRLAWGKNGSGSEDF 82 (719)
Q Consensus 6 ~~~~V~~vafSpd-g~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~-~~~~-~~~~~~~~~V~~l~~sp~g~~~~~~ 82 (719)
|...|..++-+++ +.++++|+.||+| ++|++..-.... .... ........++.++.....+
T Consensus 1047 hs~~v~k~a~s~~~~s~FvsgS~DGtV----------KvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~------ 1110 (1431)
T KOG1240|consen 1047 HSSAVIKLAVSSEHTSLFVSGSDDGTV----------KVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNG------ 1110 (1431)
T ss_pred ccccccceeecCCCCceEEEecCCceE----------EEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCC------
Confidence 3345666776665 4999999988887 788876544331 1111 1112256788899998888
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceee--eccccCCEEEEEEeCCCCC-EEEEEeCCCcEEEEcCCCCCCC
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH--LSRHKGPVRGLEFNSFTPN-LLASGADDGEICIWDLSAPAEP 159 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~--l~~h~~~V~~l~fsp~~~~-~lasgs~dg~I~iwdl~~~~~~ 159 (719)
+.+|+++.||.|++.+++......... ..... +......|...+|...... .|+.+...+.|..||++.....
T Consensus 1111 --~~~Av~t~DG~v~~~~id~~~~~~~~~--~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~ 1186 (1431)
T KOG1240|consen 1111 --DQFAVSTKDGSVRVLRIDHYNVSKRVA--TQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDA 1186 (1431)
T ss_pred --CeEEEEcCCCeEEEEEcccccccccee--eeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhH
Confidence 789999999999999996521110000 11111 2222223444455544445 7888999999999999987665
Q ss_pred CccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCC--cEEEEEe
Q 046451 160 SHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVA--TQLVVAS 237 (719)
Q Consensus 160 ~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~--~~l~~~s 237 (719)
..+ + ..-..+.|++++.++.+ .++++|+..|.+.+||+|=+..+......+...|..+..++-.. ...++++
T Consensus 1187 w~l---k--~~~~hG~vTSi~idp~~-~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~ 1260 (1431)
T KOG1240|consen 1187 WRL---K--NQLRHGLVTSIVIDPWC-NWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAG 1260 (1431)
T ss_pred Hhh---h--cCccccceeEEEecCCc-eEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEec
Confidence 442 2 12235689999999997 59999999999999999999999888877778888888877544 4455555
Q ss_pred CCCCCCcEEEEecCCCCCceEEeeCC-------------------CCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 238 DEDSSPALRLWDMRNTMSPVKEFVGH-------------------TKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 238 ~d~~~~~I~lwDl~~~~~~~~~~~~h-------------------~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
..+ .+.|.+|++.++ .+...+... ........+.. .+.++++|+.|..|+.||...-+
T Consensus 1261 ~~~-~nevs~wn~~~g-~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~-~~~~~ltggsd~kIR~wD~~~p~ 1337 (1431)
T KOG1240|consen 1261 SSS-NNEVSTWNMETG-LRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCE-KNGFLLTGGSDMKIRKWDPTRPE 1337 (1431)
T ss_pred ccC-CCceeeeecccC-cceEEEEcCCCCcchhhhcccccCCCCCcccceeeeccc-CCceeeecCCccceeeccCCCcc
Confidence 421 137999999876 333333211 11122333443 66789999999999999975321
Q ss_pred EE-----------------------------EE-------------------e--------cCCCCCeEEeEEcCCCCCE
Q 046451 299 IV-----------------------------SE-------------------L--------PAGTNWNFDIHWYPKIPGV 322 (719)
Q Consensus 299 ~~-----------------------------~~-------------------l--------~~h~~~v~~l~~spdg~~~ 322 (719)
.. .+ + ..|.+.|+++++......+
T Consensus 1338 ~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~l 1417 (1431)
T KOG1240|consen 1338 ISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPL 1417 (1431)
T ss_pred cccccccCccccccccchhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccE
Confidence 11 00 0 0366778888888776679
Q ss_pred EEEEeCCCcEEEEe
Q 046451 323 ISASSFDGKIGIYN 336 (719)
Q Consensus 323 las~s~Dg~I~iwd 336 (719)
|++++.||.|+||.
T Consensus 1418 lvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1418 LVSSSRDGVIKIWK 1431 (1431)
T ss_pred EEEecCCCeeeecC
Confidence 99999999999994
No 196
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.70 E-value=3.6e-15 Score=164.65 Aligned_cols=254 Identities=18% Similarity=0.186 Sum_probs=184.5
Q ss_pred eeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc---ccCCEEEEEEeC-CCCCEEEEEe
Q 046451 68 NRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR---HKGPVRGLEFNS-FTPNLLASGA 143 (719)
Q Consensus 68 ~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~---h~~~V~~l~fsp-~~~~~lasgs 143 (719)
..+.|++-. ..|+++...-.|+|||.+ ++ +.+..|.. ....|+.+.+.. .|..+|++|+
T Consensus 1068 k~~~~hpf~--------p~i~~ad~r~~i~vwd~e------~~---~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas 1130 (1387)
T KOG1517|consen 1068 KTLKFHPFE--------PQIAAADDRERIRVWDWE------KG---RLLNGFDNGAFPDTRVSDLELINEQDDALLLTAS 1130 (1387)
T ss_pred ceeeecCCC--------ceeEEcCCcceEEEEecc------cC---ceeccccCCCCCCCccceeeeecccchhheeeec
Confidence 345666665 578888777889999993 34 44444433 335788888854 3556899999
Q ss_pred CCCcEEEEcCCCC-----CCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCC
Q 046451 144 DDGEICIWDLSAP-----AEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR 218 (719)
Q Consensus 144 ~dg~I~iwdl~~~-----~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~ 218 (719)
.||.|+||+--.. +.+..+..+.+...+..+.-.-++|....+ .|+++++-..|+|||.....++..+..+...
T Consensus 1131 ~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G-~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t 1209 (1387)
T KOG1517|consen 1131 SDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSG-HLLVTGDVRSIRIWDAHKEQVVADIPYGSST 1209 (1387)
T ss_pred cCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCC-eEEecCCeeEEEEEecccceeEeecccCCCc
Confidence 9999999964322 222222223333333333335678887765 4555555789999999999988888877778
Q ss_pred ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC--CceEEeeCCCCC--eeEEEeCCCCCCeEEEEeCCCcEEEEEC
Q 046451 219 RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM--SPVKEFVGHTKG--VIAMSWCPNDSSYLLTCAKDNRTICWDT 294 (719)
Q Consensus 219 ~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~--~~~~~~~~h~~~--V~~v~~sp~d~~~l~sgs~Dg~I~iwd~ 294 (719)
.++++.-+-.+..++++|..|| .|++||.|... ..+...+.|... |..+.+.+++-..|++|+.||.|++||+
T Consensus 1210 ~vTaLS~~~~~gn~i~AGfaDG---svRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~Dl 1286 (1387)
T KOG1517|consen 1210 LVTALSADLVHGNIIAAGFADG---SVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDL 1286 (1387)
T ss_pred cceeecccccCCceEEEeecCC---ceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEec
Confidence 8888877766667899999998 99999998653 367778888887 9999999844456999999999999999
Q ss_pred CCCeEEE--EecCCC--C-CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 295 VSGEIVS--ELPAGT--N-WNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 295 ~~~~~~~--~l~~h~--~-~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+...... .+..|. + ..+++..+.+. .++|+|+. +.|+||++.+..+-.
T Consensus 1287 R~~~~e~~~~iv~~~~yGs~lTal~VH~ha-piiAsGs~-q~ikIy~~~G~~l~~ 1339 (1387)
T KOG1517|consen 1287 RMSSKETFLTIVAHWEYGSALTALTVHEHA-PIIASGSA-QLIKIYSLSGEQLNI 1339 (1387)
T ss_pred ccCcccccceeeeccccCccceeeeeccCC-CeeeecCc-ceEEEEecChhhhcc
Confidence 8743222 222222 2 48999999998 79999997 999999999877644
No 197
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.69 E-value=2.3e-15 Score=155.56 Aligned_cols=222 Identities=18% Similarity=0.183 Sum_probs=155.2
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.|.+.|.|++|+.||.+||+|+.|-.+ .|||.-.. .+......+|...|.++.|-|... .
T Consensus 48 GH~GCVN~LeWn~dG~lL~SGSDD~r~----------ivWd~~~~----KllhsI~TgHtaNIFsvKFvP~tn------n 107 (758)
T KOG1310|consen 48 GHTGCVNCLEWNADGELLASGSDDTRL----------IVWDPFEY----KLLHSISTGHTANIFSVKFVPYTN------N 107 (758)
T ss_pred cccceecceeecCCCCEEeecCCcceE----------Eeecchhc----ceeeeeecccccceeEEeeeccCC------C
Confidence 467889999999999999999766655 78987632 222344578999999999999763 2
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCC-CCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCcc-
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGET-GGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF- 162 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~-~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~- 162 (719)
+++++|..|..|+|+|+......... +-......+..|...|..|+-.+.+.+.+.+++.||+|+-+|++....-..-
T Consensus 108 riv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~ 187 (758)
T KOG1310|consen 108 RIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDE 187 (758)
T ss_pred eEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccc
Confidence 79999999999999999754322111 1123445567799999999999966699999999999999999874321100
Q ss_pred --C-CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc------------------eeEEecCCCC----
Q 046451 163 --P-PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK------------------PVISFSESIK---- 217 (719)
Q Consensus 163 --~-~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~------------------~~~~~~~~~~---- 217 (719)
. .+. ......-...|+.++|...++|++|+.|-..++||.+... ++..|..+|-
T Consensus 188 ~~~~~l~-ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~ 266 (758)
T KOG1310|consen 188 DCPSILV-NYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQ 266 (758)
T ss_pred cccHHHH-HhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcc
Confidence 0 000 0001112577999999988999999999999999954211 1222221111
Q ss_pred -------CceeEEEECCCCCcEEEEEeCCCCCCcEEEEecC
Q 046451 218 -------RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR 251 (719)
Q Consensus 218 -------~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~ 251 (719)
..++-+.|+|+|..+|+.-+.+ .|+++|+.
T Consensus 267 gn~~~~~~~~t~vtfnpNGtElLvs~~gE----hVYlfdvn 303 (758)
T KOG1310|consen 267 GNLDRYITCCTYVTFNPNGTELLVSWGGE----HVYLFDVN 303 (758)
T ss_pred cccccceeeeEEEEECCCCcEEEEeeCCe----EEEEEeec
Confidence 1256678999997777666655 46666653
No 198
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.69 E-value=3e-14 Score=156.04 Aligned_cols=332 Identities=14% Similarity=0.190 Sum_probs=225.2
Q ss_pred cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 10 SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 10 V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
-.++.+++.|.+.+.....+ +.+|+..... ......-....|...++|.++|+++ +++|+
T Consensus 163 ~~~I~~~~~ge~~~i~~~~~-----------~~~~~v~~~~-~~~~~~~~~~~Htf~~t~~~~spn~--------~~~Aa 222 (792)
T KOG1963|consen 163 PKSIVDNNSGEFKGIVHMCK-----------IHIYFVPKHT-KHTSSRDITVHHTFNITCVALSPNE--------RYLAA 222 (792)
T ss_pred CccEEEcCCceEEEEEEeee-----------EEEEEecccc-eeeccchhhhhhcccceeEEecccc--------ceEEE
Confidence 35677888887776664443 3567666433 1111112234566668999999998 89999
Q ss_pred EcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCC
Q 046451 90 GLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNG 169 (719)
Q Consensus 90 gs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~ 169 (719)
|..||.|.+|.-... .........+.-|...|.+++|+. ++.+|++|+..|.+.+|.+.+++. +| |..
T Consensus 223 ~d~dGrI~vw~d~~~-----~~~~~t~t~lHWH~~~V~~L~fS~-~G~~LlSGG~E~VLv~Wq~~T~~k--qf--LPR-- 290 (792)
T KOG1963|consen 223 GDSDGRILVWRDFGS-----SDDSETCTLLHWHHDEVNSLSFSS-DGAYLLSGGREGVLVLWQLETGKK--QF--LPR-- 290 (792)
T ss_pred eccCCcEEEEecccc-----ccccccceEEEecccccceeEEec-CCceEeecccceEEEEEeecCCCc--cc--ccc--
Confidence 999999999974321 112255667788999999999999 899999999999999999999882 32 221
Q ss_pred CCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC----------CCCCceeEEEECCCCCcEEEEEeCC
Q 046451 170 SAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE----------SIKRRCSVLQWNPDVATQLVVASDE 239 (719)
Q Consensus 170 ~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~----------~~~~~i~~l~~sp~g~~~l~~~s~d 239 (719)
-.+.|..+.+++++ .+.+....|..|.+....+.....++.. ...+-.+.++++|.- ..++..+..
T Consensus 291 --Lgs~I~~i~vS~ds-~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~-~~~vln~~~ 366 (792)
T KOG1963|consen 291 --LGSPILHIVVSPDS-DLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRT-NSLVLNGHP 366 (792)
T ss_pred --cCCeeEEEEEcCCC-CeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCC-CceeecCCC
Confidence 34589999999997 5778888899999998765544333331 124456778899854 356666666
Q ss_pred CCCCcEEEEecCCCCCceEEee-----------CCCCCeeEEEeCCCCCCeEEEEe--------CC--CcEEEEECCCCe
Q 046451 240 DSSPALRLWDMRNTMSPVKEFV-----------GHTKGVIAMSWCPNDSSYLLTCA--------KD--NRTICWDTVSGE 298 (719)
Q Consensus 240 ~~~~~I~lwDl~~~~~~~~~~~-----------~h~~~V~~v~~sp~d~~~l~sgs--------~D--g~I~iwd~~~~~ 298 (719)
+ .|.+||+-+... +..+. .+...++.++.+- .+.+++|.- .| ..+++|-.....
T Consensus 367 g---~vQ~ydl~td~~-i~~~~v~~~n~~~~~~n~~v~itav~~~~-~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~ 441 (792)
T KOG1963|consen 367 G---HVQFYDLYTDST-IYKLQVCDENYSDGDVNIQVGITAVARSR-FGSWMATLEARIDKFNFFDGEVSLKFWQYNPNS 441 (792)
T ss_pred c---eEEEEeccccce-eeeEEEEeecccCCcceeEEeeeeehhhc-cceEEEEeeeeehhhhccCceEEEEEEEEcCCc
Confidence 6 899999977533 23221 1223577788887 688888864 22 357889665433
Q ss_pred E----EEEe-cCCCCCeEEeEEcCCCCC-EEEEEeCCCcEEEEeCCCCcccccCCC--------CCCCCCccCcceecCC
Q 046451 299 I----VSEL-PAGTNWNFDIHWYPKIPG-VISASSFDGKIGIYNIEGCSRYGVGDS--------NFSAAPLRAPKWYKRP 364 (719)
Q Consensus 299 ~----~~~l-~~h~~~v~~l~~spdg~~-~las~s~Dg~I~iwd~~~~~~~~~~~~--------~~~~~~~~~p~w~~~~ 364 (719)
. ...+ .-|...+...+|.+.-.. .+++++.||.++||-+.+.+.....+. .|......++.|....
T Consensus 442 kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dG 521 (792)
T KOG1963|consen 442 KTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDG 521 (792)
T ss_pred ceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCC
Confidence 2 2222 246665555555543323 899999999999999966554432222 2334445666677766
Q ss_pred CceeeeeCCcEEEEccCC
Q 046451 365 AGASFGFGGKLVSFHPKS 382 (719)
Q Consensus 365 ~~~s~s~~Gklv~~~~~~ 382 (719)
..++.++++.+-.|+.+.
T Consensus 522 slla~s~~~~Itiwd~~~ 539 (792)
T KOG1963|consen 522 SLLAVSFDDTITIWDYDT 539 (792)
T ss_pred cEEEEecCCEEEEecCCC
Confidence 777777777777777776
No 199
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.69 E-value=2.3e-15 Score=155.20 Aligned_cols=274 Identities=14% Similarity=0.196 Sum_probs=187.9
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
++...|.||.|+-+...+.+++.+-. +.-|++...+.. .+.+.. ..--+.+-..+.+.+ .....
T Consensus 12 r~~e~vc~v~w~~~eei~~~~dDh~~----------~~~~~~~~~s~~-~~~~p~----df~pt~~h~~~rs~~-~g~~~ 75 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSDDHQI----------FKWSDVSRDSVE-VAKLPD----DFVPTDMHLGGRSSG-GGKGS 75 (737)
T ss_pred ccceeEEeecccccceEEEeccCceE----------EEeecccchhhh-hhhCCc----ccCCccccccccccC-CCCCc
Confidence 45667789999988887777643332 244444432221 111110 000011111111100 00122
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
..++.++.||.+.|.+- .+ +....+..|.+.|.+-.|++ ++.-|++++.||.|+||.-...
T Consensus 76 d~~~i~s~DGkf~il~k-------~~---rVE~sv~AH~~A~~~gRW~~-dGtgLlt~GEDG~iKiWSrsGM-------- 136 (737)
T KOG1524|consen 76 DTLLICSNDGRFVILNK-------SA---RVERSISAHAAAISSGRWSP-DGAGLLTAGEDGVIKIWSRSGM-------- 136 (737)
T ss_pred ceEEEEcCCceEEEecc-------cc---hhhhhhhhhhhhhhhcccCC-CCceeeeecCCceEEEEeccch--------
Confidence 68888899999999884 44 66777889999999999999 8899999999999999985432
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
++.........|.|++|.|+...++++. .+.+.|=-+.....+.... .|.+-|.+++|++.. .++++|+.|- .
T Consensus 137 LRStl~Q~~~~v~c~~W~p~S~~vl~c~--g~h~~IKpL~~n~k~i~Wk-AHDGiiL~~~W~~~s-~lI~sgGED~---k 209 (737)
T KOG1524|consen 137 LRSTVVQNEESIRCARWAPNSNSIVFCQ--GGHISIKPLAANSKIIRWR-AHDGLVLSLSWSTQS-NIIASGGEDF---R 209 (737)
T ss_pred HHHHHhhcCceeEEEEECCCCCceEEec--CCeEEEeecccccceeEEe-ccCcEEEEeecCccc-cceeecCCce---e
Confidence 2222233455899999999976666543 4567777777766677777 799999999999997 5899999998 8
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEE
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~la 324 (719)
.++||-. ...+..-..|...|++++|+| + +.++.++. +++| --+-..+.|+.++||+|| ..++
T Consensus 210 fKvWD~~--G~~Lf~S~~~ey~ITSva~np-d-~~~~v~S~-nt~R-----------~~~p~~GSifnlsWS~DG-TQ~a 272 (737)
T KOG1524|consen 210 FKIWDAQ--GANLFTSAAEEYAITSVAFNP-E-KDYLLWSY-NTAR-----------FSSPRVGSIFNLSWSADG-TQAT 272 (737)
T ss_pred EEeeccc--CcccccCChhccceeeeeecc-c-cceeeeee-eeee-----------ecCCCccceEEEEEcCCC-ceee
Confidence 9999975 355666778999999999999 6 55555543 2333 112234569999999999 7888
Q ss_pred EEeCCCcEEEEeC
Q 046451 325 ASSFDGKIGIYNI 337 (719)
Q Consensus 325 s~s~Dg~I~iwd~ 337 (719)
+|+..|.+.+-.+
T Consensus 273 ~gt~~G~v~~A~~ 285 (737)
T KOG1524|consen 273 CGTSTGQLIVAYA 285 (737)
T ss_pred ccccCceEEEeee
Confidence 8888887665433
No 200
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.68 E-value=3.7e-14 Score=138.45 Aligned_cols=241 Identities=15% Similarity=0.181 Sum_probs=161.5
Q ss_pred CceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecccc--CCEEEEEEeCCCCCEEE-EE
Q 046451 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHK--GPVRGLEFNSFTPNLLA-SG 142 (719)
Q Consensus 66 ~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~--~~V~~l~fsp~~~~~la-sg 142 (719)
...+++|+.|. ..++++.++| .+||+++-... ......+. -.+..+-| ..++|+ +|
T Consensus 7 ~~lsvs~NQD~--------ScFava~~~G-friyn~~P~ke---------~~~r~~~~~G~~~veMLf---R~N~laLVG 65 (346)
T KOG2111|consen 7 KTLSVSFNQDH--------SCFAVATDTG-FRIYNCDPFKE---------SASRQFIDGGFKIVEMLF---RSNYLALVG 65 (346)
T ss_pred ceeEEEEccCC--------ceEEEEecCc-eEEEecCchhh---------hhhhccccCchhhhhHhh---hhceEEEec
Confidence 34459999987 5788887665 89999854221 11111111 22233334 234444 33
Q ss_pred eCC------CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC-CCceeEEecCC
Q 046451 143 ADD------GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK-KQKPVISFSES 215 (719)
Q Consensus 143 s~d------g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~-~~~~~~~~~~~ 215 (719)
+.+ .+|.|||=.....+.++ ....+|.++.+..+ .|++.- .++|+||... +-+.++.+...
T Consensus 66 Gg~~pky~pNkviIWDD~k~~~i~el--------~f~~~I~~V~l~r~---riVvvl-~~~I~VytF~~n~k~l~~~et~ 133 (346)
T KOG2111|consen 66 GGSRPKYPPNKVIIWDDLKERCIIEL--------SFNSEIKAVKLRRD---RIVVVL-ENKIYVYTFPDNPKLLHVIETR 133 (346)
T ss_pred CCCCCCCCCceEEEEecccCcEEEEE--------EeccceeeEEEcCC---eEEEEe-cCeEEEEEcCCChhheeeeecc
Confidence 333 57999994444444332 23558999999887 344443 5689999988 44556655532
Q ss_pred C-CCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC-ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCc-EEEE
Q 046451 216 I-KRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS-PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR-TICW 292 (719)
Q Consensus 216 ~-~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~-~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~-I~iw 292 (719)
. .....+++-+-+ ..+|+.=+... |.|+|-|+..... .-..+.+|...|.|++.+- +|.+|||+|..|+ ||||
T Consensus 134 ~NPkGlC~~~~~~~-k~~LafPg~k~--GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~-~Gt~vATaStkGTLIRIF 209 (346)
T KOG2111|consen 134 SNPKGLCSLCPTSN-KSLLAFPGFKT--GQVQIVDLASTKPNAPSIINAHDSDIACVALNL-QGTLVATASTKGTLIRIF 209 (346)
T ss_pred cCCCceEeecCCCC-ceEEEcCCCcc--ceEEEEEhhhcCcCCceEEEcccCceeEEEEcC-CccEEEEeccCcEEEEEE
Confidence 1 223333322222 23333333322 5999999976533 3467889999999999998 9999999999997 6899
Q ss_pred ECCCCeEEEEecCC--CCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 293 DTVSGEIVSELPAG--TNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 293 d~~~~~~~~~l~~h--~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
|..+|+.+.+++.. ...|++++||++. .+|+++|+.|+|+||.+.......
T Consensus 210 dt~~g~~l~E~RRG~d~A~iy~iaFSp~~-s~LavsSdKgTlHiF~l~~~~~~~ 262 (346)
T KOG2111|consen 210 DTEDGTLLQELRRGVDRADIYCIAFSPNS-SWLAVSSDKGTLHIFSLRDTENTE 262 (346)
T ss_pred EcCCCcEeeeeecCCchheEEEEEeCCCc-cEEEEEcCCCeEEEEEeecCCCCc
Confidence 99999999999753 3469999999999 899999999999999998865433
No 201
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.68 E-value=1.5e-15 Score=149.15 Aligned_cols=280 Identities=19% Similarity=0.274 Sum_probs=188.3
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCce--EEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCC
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSAN--LEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSED 81 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~--i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~ 81 (719)
+.+.+-|.+|.|..+|.+||||+.+|.|.+.-..... ..-+-..+...+.++..+.+..-.+.|+.+.|..++..
T Consensus 22 vteadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~--- 98 (433)
T KOG1354|consen 22 VTEADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNL--- 98 (433)
T ss_pred echhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCc---
Confidence 5667889999999999999999999999772211111 11122222333345555666777889999999998743
Q ss_pred CccceEEEEcCCCcEEEEcCCccccCCCCCC--------------------------CCceee-eccccCCEEEEEEeCC
Q 046451 82 FSLGLVAGGLVDGSIDIWNPLSLISSGETGG--------------------------NPLIAH-LSRHKGPVRGLEFNSF 134 (719)
Q Consensus 82 ~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~--------------------------~~~~~~-l~~h~~~V~~l~fsp~ 134 (719)
..++..+.|.+|++|.+.......++.. ..+.+. -..|.-.|.+|+++.
T Consensus 99 ---a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~Ns- 174 (433)
T KOG1354|consen 99 ---AEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNS- 174 (433)
T ss_pred ---cEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecC-
Confidence 4666677899999999864432211000 000011 134778899999998
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCCCCCccCCccC-CCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce-----
Q 046451 135 TPNLLASGADDGEICIWDLSAPAEPSHFPPLRG-NGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP----- 208 (719)
Q Consensus 135 ~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~-~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~----- 208 (719)
|...++++ .|-.|.+|+++-......+..++. ....-..-|++..|+|...++|+..+..|+|++.|++....
T Consensus 175 D~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hs 253 (433)
T KOG1354|consen 175 DKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHS 253 (433)
T ss_pred ccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchh
Confidence 67777665 567899999875443322211111 11112336888999998888999999999999999984321
Q ss_pred -eE---------EecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCC------------CC
Q 046451 209 -VI---------SFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHT------------KG 266 (719)
Q Consensus 209 -~~---------~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~------------~~ 266 (719)
+. .+...--..|..+.|+.+|+ ++++-..- +|++||+.....++.++.-|. ..
T Consensus 254 KlfEepedp~~rsffseiIsSISDvKFs~sGr-yilsRDyl----tvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~ 328 (433)
T KOG1354|consen 254 KLFEEPEDPSSRSFFSEIISSISDVKFSHSGR-YILSRDYL----TVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDA 328 (433)
T ss_pred hhhccccCCcchhhHHHHhhhhhceEEccCCc-EEEEeccc----eeEEEeccccCCcceEEeehHhHHHHHHHHhhccc
Confidence 11 11102345688999999984 55555444 799999977778888877663 12
Q ss_pred ---eeEEEeCCCCCCeEEEEeCCCcEEEEECCCC
Q 046451 267 ---VIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297 (719)
Q Consensus 267 ---V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~ 297 (719)
-..++|+- ++.+++||+..+.+++|+...|
T Consensus 329 IfdKFec~~sg-~~~~v~TGsy~n~frvf~~~~g 361 (433)
T KOG1354|consen 329 IFDKFECSWSG-NDSYVMTGSYNNVFRVFNLARG 361 (433)
T ss_pred hhheeEEEEcC-CcceEecccccceEEEecCCCC
Confidence 24688987 7889999999999999996544
No 202
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.68 E-value=2.4e-14 Score=152.43 Aligned_cols=268 Identities=18% Similarity=0.257 Sum_probs=166.8
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEE-eCCCcEEEEcCCCCCCCCccCC
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG-ADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasg-s~dg~I~iwdl~~~~~~~~~~~ 164 (719)
++++...++.|.+|++. +......+..+. +.+....+.+++ ++++|+++ ..++.|.+|++.....+...
T Consensus 4 ~y~~~~~~~~I~~~~~~------~~g~l~~~~~~~-~~~~~~~l~~sp-d~~~lyv~~~~~~~i~~~~~~~~g~l~~~-- 73 (330)
T PRK11028 4 VYIASPESQQIHVWNLN------HEGALTLLQVVD-VPGQVQPMVISP-DKRHLYVGVRPEFRVLSYRIADDGALTFA-- 73 (330)
T ss_pred EEEEcCCCCCEEEEEEC------CCCceeeeeEEe-cCCCCccEEECC-CCCEEEEEECCCCcEEEEEECCCCceEEe--
Confidence 45555778999999993 211113444444 346677899999 77877655 45889999999732222111
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc----eeEEecCCCCCceeEEEECCCCCcEEEEEeCCC
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK----PVISFSESIKRRCSVLQWNPDVATQLVVASDED 240 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~----~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~ 240 (719)
... ...+....++|+++++.++++...++.|.+||+++.. .+..+. .......++++|+++.++++...++
T Consensus 74 -~~~--~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~--~~~~~~~~~~~p~g~~l~v~~~~~~ 148 (330)
T PRK11028 74 -AES--PLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE--GLEGCHSANIDPDNRTLWVPCLKED 148 (330)
T ss_pred -eee--cCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc--CCCcccEeEeCCCCCEEEEeeCCCC
Confidence 110 1123567899999986444444558999999997432 222222 3345678899999976666666666
Q ss_pred CCCcEEEEecCCCCCce----EEee-CCCCCeeEEEeCCCCCCeEEEEeC-CCcEEEEECCC--C--eEEEEecCC----
Q 046451 241 SSPALRLWDMRNTMSPV----KEFV-GHTKGVIAMSWCPNDSSYLLTCAK-DNRTICWDTVS--G--EIVSELPAG---- 306 (719)
Q Consensus 241 ~~~~I~lwDl~~~~~~~----~~~~-~h~~~V~~v~~sp~d~~~l~sgs~-Dg~I~iwd~~~--~--~~~~~l~~h---- 306 (719)
.|.+||+++..... .... ........+.|++ ++++|+++.. ++.|.+||+.. + +.+..+..+
T Consensus 149 ---~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~p-dg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~ 224 (330)
T PRK11028 149 ---RIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHP-NQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADF 224 (330)
T ss_pred ---EEEEEEECCCCcccccCCCceecCCCCCCceEEECC-CCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcC
Confidence 89999997633221 0111 1124567899999 8888877765 89999999973 3 334444321
Q ss_pred --CCCeEEeEEcCCCCCEEEEE-eCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccC
Q 046451 307 --TNWNFDIHWYPKIPGVISAS-SFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPK 381 (719)
Q Consensus 307 --~~~v~~l~~spdg~~~las~-s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~ 381 (719)
..+...+.|+|++ ++|+++ ..++.|.+|+++............. .. ..+..+.|+.||+.+.....
T Consensus 225 ~~~~~~~~i~~~pdg-~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~-----~~---~~p~~~~~~~dg~~l~va~~ 293 (330)
T PRK11028 225 SDTRWAADIHITPDG-RHLYACDRTASLISVFSVSEDGSVLSFEGHQP-----TE---TQPRGFNIDHSGKYLIAAGQ 293 (330)
T ss_pred CCCccceeEEECCCC-CEEEEecCCCCeEEEEEEeCCCCeEEEeEEEe-----cc---ccCCceEECCCCCEEEEEEc
Confidence 2234568999999 555555 4578999999965421110000000 00 12445788888887776654
No 203
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.68 E-value=9e-14 Score=138.31 Aligned_cols=238 Identities=17% Similarity=0.256 Sum_probs=173.6
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceE
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLV 87 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~l 87 (719)
..+..+.|+.|...|.+|+.||. ++|+.+...+ +.........|-.+-|+.. ++
T Consensus 6 ~ti~~~~~Nqd~~~lsvGs~~Gy-----------k~~~~~~~~k-----~~~~~~~~~~IvEmLFSSS----------Lv 59 (391)
T KOG2110|consen 6 PTINFIGFNQDSTLLSVGSKDGY-----------KIFSCSPFEK-----CFSKDTEGVSIVEMLFSSS----------LV 59 (391)
T ss_pred cceeeeeeccceeEEEccCCCce-----------eEEecCchHH-----hhcccCCCeEEEEeecccc----------ee
Confidence 34667779999999999999985 6777663222 1111223344555667653 66
Q ss_pred EEEcCC--CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 88 AGGLVD--GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 88 asgs~d--g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
|..+.+ +.++++++. .+ ..+..+. ....|.++.++. ++|+++-.+. |+|||+++.+.+.++...
T Consensus 60 aiV~~~qpr~Lkv~~~K------k~---~~ICe~~-fpt~IL~VrmNr---~RLvV~Lee~-IyIydI~~MklLhTI~t~ 125 (391)
T KOG2110|consen 60 AIVSIKQPRKLKVVHFK------KK---TTICEIF-FPTSILAVRMNR---KRLVVCLEES-IYIYDIKDMKLLHTIETT 125 (391)
T ss_pred EEEecCCCceEEEEEcc------cC---ceEEEEe-cCCceEEEEEcc---ceEEEEEccc-EEEEecccceeehhhhcc
Confidence 655544 358888883 33 4444443 456899999954 6677766654 999999999887775322
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEE-E-eCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILAS-T-SYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s-~-s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~ 243 (719)
. .+...+.+++++..+. +|+. + ...|.|+|||+.+-+.+..+. .|++.+.+++|+++| .+|+++++.|.
T Consensus 126 ~----~n~~gl~AlS~n~~n~-ylAyp~s~t~GdV~l~d~~nl~~v~~I~-aH~~~lAalafs~~G-~llATASeKGT-- 196 (391)
T KOG2110|consen 126 P----PNPKGLCALSPNNANC-YLAYPGSTTSGDVVLFDTINLQPVNTIN-AHKGPLAALAFSPDG-TLLATASEKGT-- 196 (391)
T ss_pred C----CCccceEeeccCCCCc-eEEecCCCCCceEEEEEcccceeeeEEE-ecCCceeEEEECCCC-CEEEEeccCce--
Confidence 1 2344677777777753 5554 2 236899999999999999999 999999999999999 68999999985
Q ss_pred cEEEEecCCCCCceEEeeCCC--CCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC
Q 046451 244 ALRLWDMRNTMSPVKEFVGHT--KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~--~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~ 296 (719)
.||||++.++ ..+.+|+... ..|.+++|++ ++.+|++.+..++|+||.+..
T Consensus 197 VIRVf~v~~G-~kl~eFRRG~~~~~IySL~Fs~-ds~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 197 VIRVFSVPEG-QKLYEFRRGTYPVSIYSLSFSP-DSQFLAASSNTETVHIFKLEK 249 (391)
T ss_pred EEEEEEcCCc-cEeeeeeCCceeeEEEEEEECC-CCCeEEEecCCCeEEEEEecc
Confidence 7999999876 5566665332 4688999999 999999999999999998763
No 204
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.68 E-value=1.9e-16 Score=170.69 Aligned_cols=272 Identities=17% Similarity=0.297 Sum_probs=208.7
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
..+|.+.|+|..|...| .+|++|+.|..|+||.. .+. .++..+.+|.+.|+.++.+. +.-++
T Consensus 186 LlgH~naVyca~fDrtg--------~~Iitgsdd~lvKiwS~------et~---~~lAs~rGhs~ditdlavs~-~n~~i 247 (1113)
T KOG0644|consen 186 LLGHRNAVYCAIFDRTG--------RYIITGSDDRLVKIWSM------ETA---RCLASCRGHSGDITDLAVSS-NNTMI 247 (1113)
T ss_pred HHhhhhheeeeeecccc--------ceEeecCccceeeeeec------cch---hhhccCCCCccccchhccch-hhhhh
Confidence 35789999999999998 89999999999999997 556 88999999999999999988 67889
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEe----cCC
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF----SES 215 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~----~~~ 215 (719)
++++.|..|++|.+.++..+.. + .+|.+.|++|+|+|-- +.+.||++++||.+ ...+... ...
T Consensus 248 aaaS~D~vIrvWrl~~~~pvsv---L----rghtgavtaiafsP~~-----sss~dgt~~~wd~r-~~~~~y~prp~~~~ 314 (1113)
T KOG0644|consen 248 AAASNDKVIRVWRLPDGAPVSV---L----RGHTGAVTAIAFSPRA-----SSSDDGTCRIWDAR-LEPRIYVPRPLKFT 314 (1113)
T ss_pred hhcccCceEEEEecCCCchHHH---H----hccccceeeeccCccc-----cCCCCCceEecccc-ccccccCCCCCCcc
Confidence 9999999999999999887655 3 3588999999999962 67889999999998 2222111 112
Q ss_pred CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 216 IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 216 ~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
....+.++.|...+ ..+.+++.++ .-..|.+.. +..+...+.-+.++.+-..+.+++-.+..+++|++.
T Consensus 315 ~~~~~~s~~~~~~~-~~f~Tgs~d~---ea~n~e~~~-------l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~ 383 (1113)
T KOG0644|consen 315 EKDLVDSILFENNG-DRFLTGSRDG---EARNHEFEQ-------LAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLY 383 (1113)
T ss_pred cccceeeeeccccc-cccccccCCc---ccccchhhH-------hhhhccceEEEeccccccccceeeeeeeEeeeeecc
Confidence 44566677777776 4688888887 566665532 122333333334443233567778888999999999
Q ss_pred CCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcE
Q 046451 296 SGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKL 375 (719)
Q Consensus 296 ~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gkl 375 (719)
+|.+++.+.+|.+.++.+.++|-++.+..+++.||++.|||+-.+..+...... .. ......||.||.-
T Consensus 384 ~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~g--h~---------kl~d~kFSqdgts 452 (1113)
T KOG0644|consen 384 TGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIG--HG---------KLVDGKFSQDGTS 452 (1113)
T ss_pred cchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecc--cc---------eeeccccCCCCce
Confidence 999999999999999999999999888899999999999999998876633211 11 1123467778777
Q ss_pred EEEccCCCC
Q 046451 376 VSFHPKSSA 384 (719)
Q Consensus 376 v~~~~~~~~ 384 (719)
+++..+.+.
T Consensus 453 ~~lsd~hgq 461 (1113)
T KOG0644|consen 453 IALSDDHGQ 461 (1113)
T ss_pred EecCCCCCc
Confidence 777666554
No 205
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.66 E-value=3.5e-15 Score=153.92 Aligned_cols=205 Identities=16% Similarity=0.232 Sum_probs=154.6
Q ss_pred CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCC
Q 046451 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSES 215 (719)
Q Consensus 136 ~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~ 215 (719)
.+.|+.++.||.+.|.+-.. +. ......|.+.|.+-.|+++| .-|+++++||.|++|. ++|-...++. .
T Consensus 75 ~d~~~i~s~DGkf~il~k~~-rV-------E~sv~AH~~A~~~gRW~~dG-tgLlt~GEDG~iKiWS-rsGMLRStl~-Q 143 (737)
T KOG1524|consen 75 SDTLLICSNDGRFVILNKSA-RV-------ERSISAHAAAISSGRWSPDG-AGLLTAGEDGVIKIWS-RSGMLRSTVV-Q 143 (737)
T ss_pred cceEEEEcCCceEEEecccc-hh-------hhhhhhhhhhhhhcccCCCC-ceeeeecCCceEEEEe-ccchHHHHHh-h
Confidence 35788999999999987443 22 12235688899999999998 5899999999999998 4454444444 5
Q ss_pred CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 216 IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 216 ~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
....|.|++|.|+.+.++++.+. .+.|=.+... ..+.....|.+-|.++.|++ ..+++++|++|-+.+|||.
T Consensus 144 ~~~~v~c~~W~p~S~~vl~c~g~-----h~~IKpL~~n-~k~i~WkAHDGiiL~~~W~~-~s~lI~sgGED~kfKvWD~- 215 (737)
T KOG1524|consen 144 NEESIRCARWAPNSNSIVFCQGG-----HISIKPLAAN-SKIIRWRAHDGLVLSLSWST-QSNIIASGGEDFRFKIWDA- 215 (737)
T ss_pred cCceeEEEEECCCCCceEEecCC-----eEEEeecccc-cceeEEeccCcEEEEeecCc-cccceeecCCceeEEeecc-
Confidence 77899999999998765555543 4777777654 44566889999999999999 8899999999999999998
Q ss_pred CCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcE
Q 046451 296 SGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKL 375 (719)
Q Consensus 296 ~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gkl 375 (719)
.|..+..-..|.-.|++++|+|+. +++.+|. +++++=..+.|..+ .++||.||.-
T Consensus 216 ~G~~Lf~S~~~ey~ITSva~npd~--~~~v~S~-nt~R~~~p~~GSif----------------------nlsWS~DGTQ 270 (737)
T KOG1524|consen 216 QGANLFTSAAEEYAITSVAFNPEK--DYLLWSY-NTARFSSPRVGSIF----------------------NLSWSADGTQ 270 (737)
T ss_pred cCcccccCChhccceeeeeecccc--ceeeeee-eeeeecCCCccceE----------------------EEEEcCCCce
Confidence 677888878899999999999993 6777763 45553333333332 2566777766
Q ss_pred EEEccCCCC
Q 046451 376 VSFHPKSSA 384 (719)
Q Consensus 376 v~~~~~~~~ 384 (719)
++++...+.
T Consensus 271 ~a~gt~~G~ 279 (737)
T KOG1524|consen 271 ATCGTSTGQ 279 (737)
T ss_pred eeccccCce
Confidence 666655554
No 206
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.65 E-value=2.6e-14 Score=157.25 Aligned_cols=213 Identities=14% Similarity=0.121 Sum_probs=143.1
Q ss_pred CCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC---CcEEEEcCCCCCCCCccCCccCCC
Q 046451 93 DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD---GEICIWDLSAPAEPSHFPPLRGNG 169 (719)
Q Consensus 93 dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d---g~I~iwdl~~~~~~~~~~~l~~~~ 169 (719)
+..|.+||.+ + .....+..|...+.+.+|+| +++.|+.++.+ ..|++||+.+++... +..+
T Consensus 183 ~~~i~i~d~d-------g---~~~~~lt~~~~~v~~p~wSP-DG~~la~~s~~~~~~~i~i~dl~tg~~~~-l~~~---- 246 (429)
T PRK01742 183 PYEVRVADYD-------G---FNQFIVNRSSQPLMSPAWSP-DGSKLAYVSFENKKSQLVVHDLRSGARKV-VASF---- 246 (429)
T ss_pred eEEEEEECCC-------C---CCceEeccCCCccccceEcC-CCCEEEEEEecCCCcEEEEEeCCCCceEE-EecC----
Confidence 4689999973 2 33455677888899999999 78888877654 369999998765321 1111
Q ss_pred CCCCCCeEEEEecCCCCcEEEEEeCCCcEEE--EECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEE
Q 046451 170 SAAQGEISFVSWNSKVQHILASTSYNGTTVV--WDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRL 247 (719)
Q Consensus 170 ~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~i--wd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~l 247 (719)
.+....++|+|+|..++++.+.+|.+.| ||+.+++. ..+. .+...+....|++||+.+++++..++ ...|
T Consensus 247 ---~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt-~~~~~~~~~~wSpDG~~i~f~s~~~g---~~~I 318 (429)
T PRK01742 247 ---RGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTP-SQLT-SGAGNNTEPSWSPDGQSILFTSDRSG---SPQV 318 (429)
T ss_pred ---CCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCe-Eeec-cCCCCcCCEEECCCCCEEEEEECCCC---CceE
Confidence 1233468999998644445556786555 56665553 4444 45667888999999976555554454 6777
Q ss_pred EecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEe
Q 046451 248 WDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASS 327 (719)
Q Consensus 248 wDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s 327 (719)
|++.........+ .+.. .++.|+| |+++|+..+.++ +.+||+.+++.......+ ...++.|+||| .+|+.++
T Consensus 319 ~~~~~~~~~~~~l-~~~~--~~~~~Sp-DG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG-~~i~~~s 390 (429)
T PRK01742 319 YRMSASGGGASLV-GGRG--YSAQISA-DGKTLVMINGDN-VVKQDLTSGSTEVLSSTF--LDESPSISPNG-IMIIYSS 390 (429)
T ss_pred EEEECCCCCeEEe-cCCC--CCccCCC-CCCEEEEEcCCC-EEEEECCCCCeEEecCCC--CCCCceECCCC-CEEEEEE
Confidence 7765433333333 3433 4678999 888888877754 666999888765333222 24578899999 6888888
Q ss_pred CCCcEEEEeC
Q 046451 328 FDGKIGIYNI 337 (719)
Q Consensus 328 ~Dg~I~iwd~ 337 (719)
.++.+.+|++
T Consensus 391 ~~g~~~~l~~ 400 (429)
T PRK01742 391 TQGLGKVLQL 400 (429)
T ss_pred cCCCceEEEE
Confidence 8888887775
No 207
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.65 E-value=3.3e-14 Score=142.29 Aligned_cols=264 Identities=16% Similarity=0.194 Sum_probs=198.8
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
......+|..++|.-++.. .+|...+.|..+..+.+.+..-.... ..+.......+.|..+... ...|
T Consensus 51 ~~~~~~ris~l~~~~d~~t------evl~~r~~~~~~~~~~~~E~~~~s~~---~~~~~~~l~~~~I~gl~~~---dg~L 118 (412)
T KOG3881|consen 51 GVDELDRISSLLFGVDGET------EVLNARSADDDLPKFVIEEFEISSSL---DDAKTVSLGTKSIKGLKLA---DGTL 118 (412)
T ss_pred ccchhhhhhhheeecCCce------eEeeccccCcccccccccCCcccccc---ccccccccccccccchhhc---CCEE
Confidence 4567788999999977642 46666667777888877432110010 1122344456677777764 3678
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC--CcEEEEECCCCceeEEecC---
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN--GTTVVWDLKKQKPVISFSE--- 214 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d--g~I~iwd~~~~~~~~~~~~--- 214 (719)
++|..+|.+.+|.+..+..-... +.. ......+..+.-++....++++|+.. ..+.|||++..+.+.+-..
T Consensus 119 itc~~sG~l~~~~~k~~d~hss~--l~~--la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpn 194 (412)
T KOG3881|consen 119 ITCVSSGNLQVRHDKSGDLHSSK--LIK--LATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPN 194 (412)
T ss_pred EEEecCCcEEEEeccCCcccccc--cee--eecCCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCC
Confidence 88999999999998854421110 110 01123566777777767788889998 8999999998876665442
Q ss_pred -----CCCCceeEEEECCCC-CcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCc
Q 046451 215 -----SIKRRCSVLQWNPDV-ATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR 288 (719)
Q Consensus 215 -----~~~~~i~~l~~sp~g-~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~ 288 (719)
.-.-.++++.|-+.. .+.|++++.-+ .|++||.+..+.++..+.-....|+++...| ++++|++|..-+.
T Consensus 195 D~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~h---qvR~YDt~~qRRPV~~fd~~E~~is~~~l~p-~gn~Iy~gn~~g~ 270 (412)
T KOG3881|consen 195 DRLGLRVPVWITDIRFLEGSPNYKFATITRYH---QVRLYDTRHQRRPVAQFDFLENPISSTGLTP-SGNFIYTGNTKGQ 270 (412)
T ss_pred ccccceeeeeeccceecCCCCCceEEEEecce---eEEEecCcccCcceeEeccccCcceeeeecC-CCcEEEEecccch
Confidence 123456778887651 36788888887 8999999999999999988889999999999 9999999999999
Q ss_pred EEEEECCCCeEEEE-ecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 289 TICWDTVSGEIVSE-LPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 289 I~iwd~~~~~~~~~-l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+..||++.++.+.. +.+-.+.|.+|..++.+ .+|++|+-|..|+|+|+.+.+++.
T Consensus 271 l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~-~~las~GLDRyvRIhD~ktrkll~ 326 (412)
T KOG3881|consen 271 LAKFDLRGGKLLGCGLKGITGSIRSIHCHPTH-PVLASCGLDRYVRIHDIKTRKLLH 326 (412)
T ss_pred hheecccCceeeccccCCccCCcceEEEcCCC-ceEEeeccceeEEEeecccchhhh
Confidence 99999999998877 88888999999999998 799999999999999999976644
No 208
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.64 E-value=4.5e-15 Score=151.92 Aligned_cols=299 Identities=15% Similarity=0.222 Sum_probs=217.5
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC-CCE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT-PNL 138 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~-~~~ 138 (719)
...|.+.|+.|.|+..| .+|++|+.|..|.+||... + ...+.-..+|...|..-.|-|+. .+.
T Consensus 138 L~~H~GcVntV~FN~~G--------d~l~SgSDD~~vv~WdW~~------~--~~~l~f~SGH~~NvfQaKFiP~s~d~t 201 (559)
T KOG1334|consen 138 LNKHKGCVNTVHFNQRG--------DVLASGSDDLQVVVWDWVS------G--SPKLSFESGHCNNVFQAKFIPFSGDRT 201 (559)
T ss_pred ccCCCCccceeeecccC--------ceeeccCccceEEeehhhc------c--CcccccccccccchhhhhccCCCCCcC
Confidence 34689999999999998 7999999999999999942 2 13344456799999888898754 357
Q ss_pred EEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC--CC
Q 046451 139 LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE--SI 216 (719)
Q Consensus 139 lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~--~~ 216 (719)
|++++.||.|++-.+......... .....|.+.|..++..|+..+.|.+++.|+.+.-+|++.......+.. .+
T Consensus 202 i~~~s~dgqvr~s~i~~t~~~e~t----~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~ 277 (559)
T KOG1334|consen 202 IVTSSRDGQVRVSEILETGYVENT----KRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREAD 277 (559)
T ss_pred ceeccccCceeeeeeccccceecc----eecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccC
Confidence 999999999999877654443221 112347889999999999888999999999999999998765443332 22
Q ss_pred CC---ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCc-----eEEee------CCCCCeeEEEeCCCCCCeEEE
Q 046451 217 KR---RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSP-----VKEFV------GHTKGVIAMSWCPNDSSYLLT 282 (719)
Q Consensus 217 ~~---~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~-----~~~~~------~h~~~V~~v~~sp~d~~~l~s 282 (719)
.. ....|+.+|...+.+++++.|. .+++||.+...+. +..+. .....|++++|+. ++.-|++
T Consensus 278 ~~~~v~L~~Ia~~P~nt~~faVgG~dq---f~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh-~~sElLa 353 (559)
T KOG1334|consen 278 EKERVGLYTIAVDPRNTNEFAVGGSDQ---FARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSH-DGSELLA 353 (559)
T ss_pred CccceeeeeEecCCCCccccccCChhh---hhhhhcccchhhccccchhhhcCCccccccCcccceeEEecC-Cccceee
Confidence 33 6788999999988999999998 8999998753221 22222 2335799999997 5555666
Q ss_pred EeCCCcEEEEECCC--C----------eEEE-EecCCCC--CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCC
Q 046451 283 CAKDNRTICWDTVS--G----------EIVS-ELPAGTN--WNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGD 347 (719)
Q Consensus 283 gs~Dg~I~iwd~~~--~----------~~~~-~l~~h~~--~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~ 347 (719)
+-.|-.|++|.-.. | ..+. .+++|.+ .|..+-|---...++++|++-|.|.||+-.+++++...+
T Consensus 354 SYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~Me 433 (559)
T KOG1334|consen 354 SYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFME 433 (559)
T ss_pred eecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhh
Confidence 66778899995432 2 1222 3778865 466776654223799999999999999999999877333
Q ss_pred CCC-CCCCccCcceecCCCceeeeeCCcEEEEccCCCC
Q 046451 348 SNF-SAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 348 ~~~-~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~~ 384 (719)
..- .++.+....|+ +..++.|-|-.+.+|...+..
T Consensus 434 gDr~VVNCLEpHP~~--PvLAsSGid~DVKIWTP~~~e 469 (559)
T KOG1334|consen 434 GDRHVVNCLEPHPHL--PVLASSGIDHDVKIWTPLTAE 469 (559)
T ss_pred cccceEeccCCCCCC--chhhccCCccceeeecCCccc
Confidence 221 22333333354 567788889999999986654
No 209
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.63 E-value=3.4e-14 Score=147.09 Aligned_cols=243 Identities=13% Similarity=0.200 Sum_probs=155.4
Q ss_pred cCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCC
Q 046451 35 FSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNP 114 (719)
Q Consensus 35 ~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~ 114 (719)
|.....+.+|++....... ..+....-......|-+|+...... ..--|+.|-..|.|.+.|........ .
T Consensus 140 Fnvg~~lyv~~~~g~~~~~-~pi~k~~y~gt~P~cHdfn~~~a~~---~g~dllIGf~tGqvq~idp~~~~~sk-----l 210 (636)
T KOG2394|consen 140 FNVGRELYVYSYRGAADLS-KPIDKREYKGTSPTCHDFNSFTATP---KGLDLLIGFTTGQVQLIDPINFEVSK-----L 210 (636)
T ss_pred EecCCeEEEEEccCcchhc-cchhhhcccCCCCceecccccccCC---CCcceEEeeccCceEEecchhhHHHH-----h
Confidence 3456677888887432221 1111111122333455553322100 11456777788999999874211000 0
Q ss_pred ceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC
Q 046451 115 LIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY 194 (719)
Q Consensus 115 ~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~ 194 (719)
......-.+..|+|+.|-+.+...++++-.+|.+++||........ . .+-...+++. .|...
T Consensus 211 fne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t--------------~-p~~~~~k~~~-~f~i~-- 272 (636)
T KOG2394|consen 211 FNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGAT--------------A-PSYQALKDGD-QFAIL-- 272 (636)
T ss_pred hhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCC--------------C-CcccccCCCC-eeEEe--
Confidence 0011111347899999999778889999999999999973211110 0 0111123332 23221
Q ss_pred CCcEEEEEC-CCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeC
Q 046451 195 NGTTVVWDL-KKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWC 273 (719)
Q Consensus 195 dg~I~iwd~-~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~s 273 (719)
.|.- .+..++..+. ...+.|..++|++|| .+|++.+.|+ .++|||..+. +.+..++..-++..|++||
T Consensus 273 -----t~ksk~~rNPv~~w~-~~~g~in~f~FS~DG-~~LA~VSqDG---fLRvF~fdt~-eLlg~mkSYFGGLLCvcWS 341 (636)
T KOG2394|consen 273 -----TSKSKKTRNPVARWH-IGEGSINEFAFSPDG-KYLATVSQDG---FLRIFDFDTQ-ELLGVMKSYFGGLLCVCWS 341 (636)
T ss_pred -----eeeccccCCccceeE-eccccccceeEcCCC-ceEEEEecCc---eEEEeeccHH-HHHHHHHhhccceEEEEEc
Confidence 1111 1124444444 345589999999998 5799999998 9999999763 4444444555789999999
Q ss_pred CCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEc
Q 046451 274 PNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWY 316 (719)
Q Consensus 274 p~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~s 316 (719)
| |++||++|++|.-|.||.+..++.+..-.+|..||..|+|.
T Consensus 342 P-DGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 342 P-DGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFD 383 (636)
T ss_pred C-CccEEEecCCcceEEEEEeccceEEEeccccccceeeEeec
Confidence 9 99999999999999999999999999999999999999998
No 210
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.63 E-value=7.8e-14 Score=145.42 Aligned_cols=283 Identities=17% Similarity=0.253 Sum_probs=189.6
Q ss_pred cCccceEEEcCCCCeE-EEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 7 INRSASVAFAPDAPYM-AAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 7 ~~~V~~vafSpdg~~L-atgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
....+.|..||||+|| |+|.+.- .|++||+..-. +++ .......+..+....|.- .
T Consensus 51 p~ast~ik~s~DGqY~lAtG~YKP----------~ikvydlanLS----LKF--ERhlDae~V~feiLsDD~-------S 107 (703)
T KOG2321|consen 51 PTASTRIKVSPDGQYLLATGTYKP----------QIKVYDLANLS----LKF--ERHLDAEVVDFEILSDDY-------S 107 (703)
T ss_pred ccccceeEecCCCcEEEEecccCC----------ceEEEEcccce----eee--eecccccceeEEEeccch-------h
Confidence 3556789999999975 5565444 45899988432 211 122233333333322221 2
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
.++.-..|.+|.+..-. | .-..+. -...-.+++++..+..+++.|+ ...|+-++++.+..+..|
T Consensus 108 K~v~L~~DR~IefHak~-------G----~hy~~R-IP~~GRDm~y~~~scDly~~gs-g~evYRlNLEqGrfL~P~--- 171 (703)
T KOG2321|consen 108 KSVFLQNDRTIEFHAKY-------G----RHYRTR-IPKFGRDMKYHKPSCDLYLVGS-GSEVYRLNLEQGRFLNPF--- 171 (703)
T ss_pred hheEeecCceeeehhhc-------C----eeeeee-cCcCCccccccCCCccEEEeec-CcceEEEEcccccccccc---
Confidence 33334456666665421 1 111111 1122346666654445555444 457888899988866553
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCC-----C-----CCceeEEEECCCCCcEEEE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSES-----I-----KRRCSVLQWNPDVATQLVV 235 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~-----~-----~~~i~~l~~sp~g~~~l~~ 235 (719)
.. ..+.++++..++.. .+|++|+.+|.|..||.+....+.++... + ...|+++.|+.+| ..+++
T Consensus 172 ~~----~~~~lN~v~in~~h-gLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~g-L~~aV 245 (703)
T KOG2321|consen 172 ET----DSGELNVVSINEEH-GLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDG-LHVAV 245 (703)
T ss_pred cc----ccccceeeeecCcc-ceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCc-eeEEe
Confidence 22 23589999999986 48999999999999999988776666531 1 2249999999997 67999
Q ss_pred EeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEE
Q 046451 236 ASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHW 315 (719)
Q Consensus 236 ~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~ 315 (719)
|+..| .|.|||+|.....+..-.+....|..+.|.+.+..--+.......++|||-.+|+....+....+ +.++|+
T Consensus 246 Gts~G---~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~~Gk~~asiEpt~~-lND~C~ 321 (703)
T KOG2321|consen 246 GTSTG---SVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDECTGKPMASIEPTSD-LNDFCF 321 (703)
T ss_pred eccCC---cEEEEEcccCCceeecccCCccceeeecccccCCCceEEecchHHhhhcccccCCceeeccccCC-cCceee
Confidence 99988 89999999864444333445568899999874444344444567899999999999888876555 999999
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 316 YPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 316 spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
-+++ .+++++.+++.+..|-+..
T Consensus 322 ~p~s-Gm~f~Ane~~~m~~yyiP~ 344 (703)
T KOG2321|consen 322 VPGS-GMFFTANESSKMHTYYIPS 344 (703)
T ss_pred ecCC-ceEEEecCCCcceeEEccc
Confidence 9998 7999999899888887765
No 211
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.62 E-value=4.9e-14 Score=155.02 Aligned_cols=236 Identities=17% Similarity=0.193 Sum_probs=155.0
Q ss_pred CceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCC---CcEEEEcCCccccCCCCCCCC
Q 046451 38 SANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVD---GSIDIWNPLSLISSGETGGNP 114 (719)
Q Consensus 38 ~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~d---g~I~lwd~~~~~~~~~~~~~~ 114 (719)
+..|.+||.+.... .. ...+...+.+++|+||| +.|+..+.+ ..|++||+.+ + ...
T Consensus 183 ~~~i~i~d~dg~~~-~~-----lt~~~~~v~~p~wSPDG--------~~la~~s~~~~~~~i~i~dl~t------g-~~~ 241 (429)
T PRK01742 183 PYEVRVADYDGFNQ-FI-----VNRSSQPLMSPAWSPDG--------SKLAYVSFENKKSQLVVHDLRS------G-ARK 241 (429)
T ss_pred eEEEEEECCCCCCc-eE-----eccCCCccccceEcCCC--------CEEEEEEecCCCcEEEEEeCCC------C-ceE
Confidence 35678888874431 11 13466789999999998 567766543 3699999842 2 002
Q ss_pred ceeeeccccCCEEEEEEeCCCCCEEEEE-eCCCcEEEE--cCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEE
Q 046451 115 LIAHLSRHKGPVRGLEFNSFTPNLLASG-ADDGEICIW--DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILAS 191 (719)
Q Consensus 115 ~~~~l~~h~~~V~~l~fsp~~~~~lasg-s~dg~I~iw--dl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s 191 (719)
.+..+.+| ...++|+| |++.|+.+ +.+|.+.|| |+.++.. .. + ..+...+....|+++|..++++
T Consensus 242 ~l~~~~g~---~~~~~wSP-DG~~La~~~~~~g~~~Iy~~d~~~~~~-~~---l----t~~~~~~~~~~wSpDG~~i~f~ 309 (429)
T PRK01742 242 VVASFRGH---NGAPAFSP-DGSRLAFASSKDGVLNIYVMGANGGTP-SQ---L----TSGAGNNTEPSWSPDGQSILFT 309 (429)
T ss_pred EEecCCCc---cCceeECC-CCCEEEEEEecCCcEEEEEEECCCCCe-Ee---e----ccCCCCcCCEEECCCCCEEEEE
Confidence 23333333 34689999 77777665 468876655 5554432 11 1 1234467889999998655666
Q ss_pred EeCCCcEEEEECCCCc-eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEE
Q 046451 192 TSYNGTTVVWDLKKQK-PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAM 270 (719)
Q Consensus 192 ~s~dg~I~iwd~~~~~-~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v 270 (719)
+..+|...||++.... ....+. +.. ..+.|+|||+. ++..+.+ .+.+||+.++.. ..+..+ ....++
T Consensus 310 s~~~g~~~I~~~~~~~~~~~~l~--~~~--~~~~~SpDG~~-ia~~~~~----~i~~~Dl~~g~~--~~lt~~-~~~~~~ 377 (429)
T PRK01742 310 SDRSGSPQVYRMSASGGGASLVG--GRG--YSAQISADGKT-LVMINGD----NVVKQDLTSGST--EVLSST-FLDESP 377 (429)
T ss_pred ECCCCCceEEEEECCCCCeEEec--CCC--CCccCCCCCCE-EEEEcCC----CEEEEECCCCCe--EEecCC-CCCCCc
Confidence 6678888888775422 222222 222 45789999964 5445444 477799977532 222222 133568
Q ss_pred EeCCCCCCeEEEEeCCCcEEEEEC--CCCeEEEEecCCCCCeEEeEEcCCC
Q 046451 271 SWCPNDSSYLLTCAKDNRTICWDT--VSGEIVSELPAGTNWNFDIHWYPKI 319 (719)
Q Consensus 271 ~~sp~d~~~l~sgs~Dg~I~iwd~--~~~~~~~~l~~h~~~v~~l~~spdg 319 (719)
.|+| |+++|+.++.++.+.+|++ .+|+.+..+..|.+.+...+|+|-.
T Consensus 378 ~~sP-dG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~~ 427 (429)
T PRK01742 378 SISP-NGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSPYL 427 (429)
T ss_pred eECC-CCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcccCCCC
Confidence 8999 9999999999998888875 3688888898888889999999853
No 212
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.61 E-value=7.8e-14 Score=156.74 Aligned_cols=270 Identities=17% Similarity=0.217 Sum_probs=183.7
Q ss_pred ecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCC
Q 046451 58 VGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN 137 (719)
Q Consensus 58 ~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~ 137 (719)
.....|+..|..++-+++.. .++++|+.||+|++||..+.... +...+...++......+.++.+.. +++
T Consensus 1042 AhL~Ehs~~v~k~a~s~~~~-------s~FvsgS~DGtVKvW~~~k~~~~--~~s~rS~ltys~~~sr~~~vt~~~-~~~ 1111 (1431)
T KOG1240|consen 1042 AHLHEHSSAVIKLAVSSEHT-------SLFVSGSDDGTVKVWNLRKLEGE--GGSARSELTYSPEGSRVEKVTMCG-NGD 1111 (1431)
T ss_pred ehhhhccccccceeecCCCC-------ceEEEecCCceEEEeeehhhhcC--cceeeeeEEEeccCCceEEEEecc-CCC
Confidence 44467888888999887653 69999999999999999765431 111133334444567888999888 789
Q ss_pred EEEEEeCCCcEEEEcCCCCCCCCcc--CCccCCCCCCCCCeEEEEecCCCC-cEEEEEeCCCcEEEEECCCCceeEEecC
Q 046451 138 LLASGADDGEICIWDLSAPAEPSHF--PPLRGNGSAAQGEISFVSWNSKVQ-HILASTSYNGTTVVWDLKKQKPVISFSE 214 (719)
Q Consensus 138 ~lasgs~dg~I~iwdl~~~~~~~~~--~~l~~~~~~h~~~I~~l~~sp~g~-~~l~s~s~dg~I~iwd~~~~~~~~~~~~ 214 (719)
.+|+++.||.|++.+++..+..... .............|...+|....+ +.|+.+...+.|..||++......++..
T Consensus 1112 ~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~ 1191 (1431)
T KOG1240|consen 1112 QFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKN 1191 (1431)
T ss_pred eEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhc
Confidence 9999999999999999863221111 001111111122344444544333 4788889999999999998776665553
Q ss_pred -CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEe-eCCCCCeeEEEeCCCCC--CeEEEEe--CCCc
Q 046451 215 -SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF-VGHTKGVIAMSWCPNDS--SYLLTCA--KDNR 288 (719)
Q Consensus 215 -~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~-~~h~~~V~~v~~sp~d~--~~l~sgs--~Dg~ 288 (719)
...+.|++++.++.+ .++++|+..| .+.+||+|-. .++... ..+...|..+..++..+ ...++++ ..+.
T Consensus 1192 ~~~hG~vTSi~idp~~-~WlviGts~G---~l~lWDLRF~-~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~ne 1266 (1431)
T KOG1240|consen 1192 QLRHGLVTSIVIDPWC-NWLVIGTSRG---QLVLWDLRFR-VPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNE 1266 (1431)
T ss_pred CccccceeEEEecCCc-eEEEEecCCc---eEEEEEeecC-ceeecccCcccCCcceEEeeccCCCCceEEEecccCCCc
Confidence 345789999999998 4899999988 8999999864 444443 24557788888776333 4555544 5788
Q ss_pred EEEEECCCCeEEEEecCCCC-------------------CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 289 TICWDTVSGEIVSELPAGTN-------------------WNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 289 I~iwd~~~~~~~~~l~~h~~-------------------~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
|.+|++.+|.+...+....+ ....+.+. ++..++.+|+.|..|+.||...-+..
T Consensus 1267 vs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~-~~~~~~ltggsd~kIR~wD~~~p~~s 1339 (1431)
T KOG1240|consen 1267 VSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVC-EKNGFLLTGGSDMKIRKWDPTRPEIS 1339 (1431)
T ss_pred eeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecc-cCCceeeecCCccceeeccCCCcccc
Confidence 99999999876665543210 11112222 33368999999999999999876654
No 213
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.60 E-value=7.7e-14 Score=136.23 Aligned_cols=241 Identities=15% Similarity=0.200 Sum_probs=181.7
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasg 142 (719)
....|+|.+|+.|. ..+|++..+..|.||... ...-++...++..|...|++|+|++ ..+.|++|
T Consensus 9 ~~~pitchAwn~dr--------t~iAv~~~~~evhiy~~~------~~~~w~~~htls~Hd~~vtgvdWap-~snrIvtc 73 (361)
T KOG1523|consen 9 LLEPITCHAWNSDR--------TQIAVSPNNHEVHIYSML------GADLWEPAHTLSEHDKIVTGVDWAP-KSNRIVTC 73 (361)
T ss_pred ccCceeeeeecCCC--------ceEEeccCCceEEEEEec------CCCCceeceehhhhCcceeEEeecC-CCCceeEc
Confidence 35789999999998 789999999999999973 2222578899999999999999999 78899999
Q ss_pred eCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCcee---EEecCCCCCc
Q 046451 143 ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPV---ISFSESIKRR 219 (719)
Q Consensus 143 s~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~---~~~~~~~~~~ 219 (719)
+.|..-+||....+....... ....+....+++.|+|.. +.|++|+....|.||-++..+.- +.+...+.+.
T Consensus 74 s~drnayVw~~~~~~~Wkptl----vLlRiNrAAt~V~WsP~e-nkFAVgSgar~isVcy~E~ENdWWVsKhikkPirSt 148 (361)
T KOG1523|consen 74 SHDRNAYVWTQPSGGTWKPTL----VLLRINRAATCVKWSPKE-NKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRST 148 (361)
T ss_pred cCCCCccccccCCCCeeccce----eEEEeccceeeEeecCcC-ceEEeccCccEEEEEEEecccceehhhhhCCccccc
Confidence 999999999985443332211 112356689999999995 79999999999999988765432 2233357788
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecC-----CC------------CCceEEeeCCCCCeeEEEeCCCCCCeEEE
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMR-----NT------------MSPVKEFVGHTKGVIAMSWCPNDSSYLLT 282 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~-----~~------------~~~~~~~~~h~~~V~~v~~sp~d~~~l~s 282 (719)
|.+++|++++ -++++|+.|+ ..++|..- .. +..+.++....++|..+.|++ +|..|+-
T Consensus 149 v~sldWhpnn-VLlaaGs~D~---k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~-sG~~law 223 (361)
T KOG1523|consen 149 VTSLDWHPNN-VLLAAGSTDG---KCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSP-SGNRLAW 223 (361)
T ss_pred eeeeeccCCc-ceecccccCc---ceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCC-CCCEeeE
Confidence 9999999997 6888888888 67777542 10 012334445567999999999 9999999
Q ss_pred EeCCCcEEEEECCCCe-EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCC
Q 046451 283 CAKDNRTICWDTVSGE-IVSELPAGTNWNFDIHWYPKIPGVISASSFDG 330 (719)
Q Consensus 283 gs~Dg~I~iwd~~~~~-~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg 330 (719)
.+.|+.+.+-|..... .+..+....-...++.|-.+. .++.+++|.
T Consensus 224 v~Hds~v~~~da~~p~~~v~~~~~~~lP~ls~~~ise~--~vv~ag~~c 270 (361)
T KOG1523|consen 224 VGHDSTVSFVDAAGPSERVQSVATAQLPLLSVSWISEN--SVVAAGYDC 270 (361)
T ss_pred ecCCCceEEeecCCCchhccchhhccCCceeeEeecCC--ceeecCCCC
Confidence 9999999999986654 344444444567788887765 455555553
No 214
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.58 E-value=3.9e-13 Score=131.43 Aligned_cols=298 Identities=16% Similarity=0.255 Sum_probs=194.2
Q ss_pred eEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEc
Q 046451 12 SVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGL 91 (719)
Q Consensus 12 ~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs 91 (719)
-++|||+|+|||+.+... +.|-|..+-+ +...+..-+.|.-|.|.-|.. .+|+...
T Consensus 13 ~c~fSp~g~yiAs~~~yr-----------lviRd~~tlq------~~qlf~cldki~yieW~ads~-------~ilC~~y 68 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRYR-----------LVIRDSETLQ------LHQLFLCLDKIVYIEWKADSC-------HILCVAY 68 (447)
T ss_pred ceeECCCCCeeeeeeeeE-----------EEEeccchhh------HHHHHHHHHHhhheeeeccce-------eeeeeee
Confidence 578999999999996542 2455544322 222233356777899998753 6777788
Q ss_pred CCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCC
Q 046451 92 VDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSA 171 (719)
Q Consensus 92 ~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~ 171 (719)
.|+.|.+|++. .- +....+......+..++|+|++..+|.+...|-.|.||.+.+.+.... . .
T Consensus 69 k~~~vqvwsl~------Qp---ew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~-----~---~ 131 (447)
T KOG4497|consen 69 KDPKVQVWSLV------QP---EWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLL-----P---H 131 (447)
T ss_pred ccceEEEEEee------cc---eeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEe-----c---c
Confidence 89999999994 23 455667777889999999995557788888999999999998765321 1 1
Q ss_pred CCCCeEEEEecCCCCcEEEEEeC-C-----------------------------------CcEEEEECCCCceeEEecCC
Q 046451 172 AQGEISFVSWNSKVQHILASTSY-N-----------------------------------GTTVVWDLKKQKPVISFSES 215 (719)
Q Consensus 172 h~~~I~~l~~sp~g~~~l~s~s~-d-----------------------------------g~I~iwd~~~~~~~~~~~~~ 215 (719)
.+..+..++|+++|+ +.+.++. | ..+.+||.--.-.+..+.
T Consensus 132 pK~~~kg~~f~~dg~-f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe-- 208 (447)
T KOG4497|consen 132 PKTNVKGYAFHPDGQ-FCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYE-- 208 (447)
T ss_pred cccCceeEEECCCCc-eeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeee--
Confidence 122456778888874 4433332 1 223444432222222222
Q ss_pred CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCC---------------C---------C----------------
Q 046451 216 IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNT---------------M---------S---------------- 255 (719)
Q Consensus 216 ~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~---------------~---------~---------------- 255 (719)
-.-.+..++|+|.+ .++++|+.|+ .+++.+--+- . +
T Consensus 209 ~~lG~k~v~wsP~~-qflavGsyD~---~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~ 284 (447)
T KOG4497|consen 209 RGLGLKFVEWSPCN-QFLAVGSYDQ---MLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDL 284 (447)
T ss_pred eccceeEEEecccc-ceEEeeccch---hhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCcc
Confidence 34568889999987 6899999997 5555332100 0 0
Q ss_pred -----------------c--eEEee------CCCCCeeEEEeCCCCCCeEEEEeCC--CcEEEEECCCCeEEEEecCCCC
Q 046451 256 -----------------P--VKEFV------GHTKGVIAMSWCPNDSSYLLTCAKD--NRTICWDTVSGEIVSELPAGTN 308 (719)
Q Consensus 256 -----------------~--~~~~~------~h~~~V~~v~~sp~d~~~l~sgs~D--g~I~iwd~~~~~~~~~l~~h~~ 308 (719)
+ +..++ ...-++..++|++ |..+++|-.+. +.+-+||++..+....+ ....
T Consensus 285 ~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~-Ds~y~aTrnd~~PnalW~Wdlq~l~l~avL-iQk~ 362 (447)
T KOG4497|consen 285 EAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSC-DSTYAATRNDKYPNALWLWDLQNLKLHAVL-IQKH 362 (447)
T ss_pred ccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecC-CceEEeeecCCCCceEEEEechhhhhhhhh-hhcc
Confidence 0 00000 1123566789999 88888876543 67999999877665554 3445
Q ss_pred CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecC
Q 046451 309 WNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKR 363 (719)
Q Consensus 309 ~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~ 363 (719)
.|....|+|..+++++ +....++++|.......++.....|... ..+|.-.
T Consensus 363 piraf~WdP~~prL~v-ctg~srLY~W~psg~~~V~vP~~GF~i~---~l~W~~~ 413 (447)
T KOG4497|consen 363 PIRAFEWDPGRPRLVV-CTGKSRLYFWAPSGPRVVGVPKKGFNIQ---KLQWLQP 413 (447)
T ss_pred ceeEEEeCCCCceEEE-EcCCceEEEEcCCCceEEecCCCCceee---eEEecCC
Confidence 6999999999865544 4446789999999988888666666653 3446543
No 215
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.58 E-value=1.7e-13 Score=137.26 Aligned_cols=221 Identities=14% Similarity=0.180 Sum_probs=163.6
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC--CcEEEEcCCCCCCCCcc
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD--GEICIWDLSAPAEPSHF 162 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d--g~I~iwdl~~~~~~~~~ 162 (719)
..|++|-.+|.+.+|..+..... . ..+..+..+ ..+..+.-++.+..++++|+.. ..+.|||++..+.+..-
T Consensus 116 g~Litc~~sG~l~~~~~k~~d~h--s---s~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~a 189 (412)
T KOG3881|consen 116 GTLITCVSSGNLQVRHDKSGDLH--S---SKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSA 189 (412)
T ss_pred CEEEEEecCCcEEEEeccCCccc--c---ccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeec
Confidence 58999999999999998542210 1 333334433 4566777777667788889998 89999999987544332
Q ss_pred CCccCCCCC--CCCCeEEEEecCC-CCcEEEEEeCCCcEEEEECCCC-ceeEEecCCCCCceeEEEECCCCCcEEEEEeC
Q 046451 163 PPLRGNGSA--AQGEISFVSWNSK-VQHILASTSYNGTTVVWDLKKQ-KPVISFSESIKRRCSVLQWNPDVATQLVVASD 238 (719)
Q Consensus 163 ~~l~~~~~~--h~~~I~~l~~sp~-g~~~l~s~s~dg~I~iwd~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~ 238 (719)
...+...-+ ..-.++++.|-+. ..+.|++++.-+.|++||.+.+ +++..|. .....++++...+++ ++++++..
T Consensus 190 KNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd-~~E~~is~~~l~p~g-n~Iy~gn~ 267 (412)
T KOG3881|consen 190 KNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFD-FLENPISSTGLTPSG-NFIYTGNT 267 (412)
T ss_pred cCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEec-cccCcceeeeecCCC-cEEEEecc
Confidence 212211111 1225677888665 1368999999999999999976 5677777 678899999999998 57888887
Q ss_pred CCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCC
Q 046451 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPK 318 (719)
Q Consensus 239 d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spd 318 (719)
.+ .+..||++........+.+-.+.|.+|..+| ...+|++||-|..|||+|+.+.+++...-. ...+++|.+.++
T Consensus 268 ~g---~l~~FD~r~~kl~g~~~kg~tGsirsih~hp-~~~~las~GLDRyvRIhD~ktrkll~kvYv-Ks~lt~il~~~~ 342 (412)
T KOG3881|consen 268 KG---QLAKFDLRGGKLLGCGLKGITGSIRSIHCHP-THPVLASCGLDRYVRIHDIKTRKLLHKVYV-KSRLTFILLRDD 342 (412)
T ss_pred cc---hhheecccCceeeccccCCccCCcceEEEcC-CCceEEeeccceeEEEeecccchhhhhhhh-hccccEEEecCC
Confidence 77 8999999987665666888999999999999 889999999999999999999777655432 233666666554
No 216
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.58 E-value=2e-14 Score=148.78 Aligned_cols=219 Identities=19% Similarity=0.261 Sum_probs=166.8
Q ss_pred CceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCC-CcEEEEE
Q 046451 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKV-QHILAST 192 (719)
Q Consensus 114 ~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g-~~~l~s~ 192 (719)
.....+.+|++.|+|++|+. +|.+|++|++|-.|.|||.-..+.... ...+|...|.++.|-|.. ..++++|
T Consensus 41 ~lE~eL~GH~GCVN~LeWn~-dG~lL~SGSDD~r~ivWd~~~~Kllhs------I~TgHtaNIFsvKFvP~tnnriv~sg 113 (758)
T KOG1310|consen 41 DLEAELTGHTGCVNCLEWNA-DGELLASGSDDTRLIVWDPFEYKLLHS------ISTGHTANIFSVKFVPYTNNRIVLSG 113 (758)
T ss_pred chhhhhccccceecceeecC-CCCEEeecCCcceEEeecchhcceeee------eecccccceeEEeeeccCCCeEEEec
Confidence 33456889999999999999 899999999999999999986555433 346789999999998753 3588899
Q ss_pred eCCCcEEEEECCCC----------ceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEE---
Q 046451 193 SYNGTTVVWDLKKQ----------KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE--- 259 (719)
Q Consensus 193 s~dg~I~iwd~~~~----------~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~--- 259 (719)
..|..|+++|+... .....+. .|...|..|+..+++.+.+.+++.|| +|+-||+|....+-..
T Consensus 114 AgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~-cht~rVKria~~p~~PhtfwsasEDG---tirQyDiREph~c~p~~~~ 189 (758)
T KOG1310|consen 114 AGDKLIKLFDLDSSKEGGMDHGMEETTRCWS-CHTDRVKRIATAPNGPHTFWSASEDG---TIRQYDIREPHVCNPDEDC 189 (758)
T ss_pred cCcceEEEEecccccccccccCccchhhhhh-hhhhhhhheecCCCCCceEEEecCCc---ceeeecccCCccCCccccc
Confidence 99999999999852 2223333 68889999999999989999999998 9999999864322211
Q ss_pred ------eeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC--------Ce----------EEEEe-cCCC-------
Q 046451 260 ------FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS--------GE----------IVSEL-PAGT------- 307 (719)
Q Consensus 260 ------~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~--------~~----------~~~~l-~~h~------- 307 (719)
+....-...++..+|.+..+|++|+.|-..++||.+. +. ++..+ .+|.
T Consensus 190 ~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~ 269 (758)
T KOG1310|consen 190 PSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNL 269 (758)
T ss_pred cHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCccccc
Confidence 1122245678999998889999999999999999431 11 12222 1221
Q ss_pred ----CCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 308 ----NWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 308 ----~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
..++-+.|+|+|..+|++-+ ...|+++|+..++...
T Consensus 270 ~~~~~~~t~vtfnpNGtElLvs~~-gEhVYlfdvn~~~~~~ 309 (758)
T KOG1310|consen 270 DRYITCCTYVTFNPNGTELLVSWG-GEHVYLFDVNEDKSPT 309 (758)
T ss_pred ccceeeeEEEEECCCCcEEEEeeC-CeEEEEEeecCCCCce
Confidence 12567899999987888877 4589999999877644
No 217
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.57 E-value=1.2e-12 Score=136.79 Aligned_cols=242 Identities=14% Similarity=0.206 Sum_probs=167.6
Q ss_pred eeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC-CCCEEEE-----
Q 046451 68 NRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF-TPNLLAS----- 141 (719)
Q Consensus 68 ~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~-~~~~las----- 141 (719)
+++.|+.|. .|++--..+.+.+|++.. . ...... -|...|..+.+++. ....+|+
T Consensus 129 W~~qfs~dE---------sl~arlv~nev~f~~~~~------f--~~~~~k--l~~~~i~~f~lSpgp~~~~vAvyvPe~ 189 (566)
T KOG2315|consen 129 WVPQFSIDE---------SLAARLVSNEVQFYDLGS------F--KTIQHK--LSVSGITMLSLSPGPEPPFVAVYVPEK 189 (566)
T ss_pred cccccccch---------hhhhhhhcceEEEEecCC------c--cceeee--eeccceeeEEecCCCCCceEEEEccCC
Confidence 578888884 566666678899999842 1 022222 35788999999993 2234443
Q ss_pred EeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC-----------CcEEEEECCCCceeE
Q 046451 142 GADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN-----------GTTVVWDLKKQKPVI 210 (719)
Q Consensus 142 gs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d-----------g~I~iwd~~~~~~~~ 210 (719)
.+.-+.|+||.+........+. .+ .-....-..+.|+..|..+|+..+.| .+++++++....+..
T Consensus 190 kGaPa~vri~~~~~~~~~~~~a-~k---sFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V 265 (566)
T KOG2315|consen 190 KGAPASVRIYKYPEEGQHQPVA-NK---SFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSV 265 (566)
T ss_pred CCCCcEEEEeccccccccchhh-hc---cccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEE
Confidence 3455689999887333221110 11 11233445788998877666655432 468888888556666
Q ss_pred EecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCC---C
Q 046451 211 SFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD---N 287 (719)
Q Consensus 211 ~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~D---g 287 (719)
.+. ..+.|.++.|++++..+.++-+.-- ..+.|||++. .++..+ ..+.-+++-|+| .|++|+.+|.+ |
T Consensus 266 ~L~--k~GPVhdv~W~~s~~EF~VvyGfMP--Akvtifnlr~--~~v~df--~egpRN~~~fnp-~g~ii~lAGFGNL~G 336 (566)
T KOG2315|consen 266 PLL--KEGPVHDVTWSPSGREFAVVYGFMP--AKVTIFNLRG--KPVFDF--PEGPRNTAFFNP-HGNIILLAGFGNLPG 336 (566)
T ss_pred ecC--CCCCceEEEECCCCCEEEEEEeccc--ceEEEEcCCC--CEeEeC--CCCCccceEECC-CCCEEEEeecCCCCC
Confidence 665 7899999999999976655555443 2899999974 444444 456778899999 89999888865 7
Q ss_pred cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeC------CCcEEEEeCCCCcccc
Q 046451 288 RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSF------DGKIGIYNIEGCSRYG 344 (719)
Q Consensus 288 ~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~------Dg~I~iwd~~~~~~~~ 344 (719)
.|-|||+.+.+++..+.... .+-+.|+|||+ +|+|++. |+.++||++.+..+..
T Consensus 337 ~mEvwDv~n~K~i~~~~a~~--tt~~eW~PdGe-~flTATTaPRlrvdNg~KiwhytG~~l~~ 396 (566)
T KOG2315|consen 337 DMEVWDVPNRKLIAKFKAAN--TTVFEWSPDGE-YFLTATTAPRLRVDNGIKIWHYTGSLLHE 396 (566)
T ss_pred ceEEEeccchhhccccccCC--ceEEEEcCCCc-EEEEEeccccEEecCCeEEEEecCceeeh
Confidence 89999999999998887654 45678999995 5555443 7899999998876644
No 218
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.57 E-value=1.5e-12 Score=142.98 Aligned_cols=237 Identities=12% Similarity=0.115 Sum_probs=149.2
Q ss_pred cEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEe---CCCcEEEEcCCCCCCCCccCCccCCCCC
Q 046451 95 SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA---DDGEICIWDLSAPAEPSHFPPLRGNGSA 171 (719)
Q Consensus 95 ~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs---~dg~I~iwdl~~~~~~~~~~~l~~~~~~ 171 (719)
.|.+||.+ + .....+..+...+.+.+|+| |++.|+..+ .+..|++||+.+++.... ..
T Consensus 180 ~l~~~d~d-------g---~~~~~lt~~~~~~~~p~wSP-DG~~la~~s~~~g~~~i~i~dl~~G~~~~l-~~------- 240 (429)
T PRK03629 180 ELRVSDYD-------G---YNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQV-AS------- 240 (429)
T ss_pred eEEEEcCC-------C---CCCEEeecCCCceeeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCCeEEc-cC-------
Confidence 68888873 2 33344555677899999999 778777654 245799999987653221 11
Q ss_pred CCCCeEEEEecCCCCcEEEEEeCCC--cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEe
Q 046451 172 AQGEISFVSWNSKVQHILASTSYNG--TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWD 249 (719)
Q Consensus 172 h~~~I~~l~~sp~g~~~l~s~s~dg--~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwD 249 (719)
..+.+..+.|+|+|..++++.+.+| .|++||+++++...... +...+....|+|||+.++++ +++++...|+++|
T Consensus 241 ~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~--~~~~~~~~~wSPDG~~I~f~-s~~~g~~~Iy~~d 317 (429)
T PRK03629 241 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTD--GRSNNTEPTWFPDSQNLAYT-SDQAGRPQVYKVN 317 (429)
T ss_pred CCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccC--CCCCcCceEECCCCCEEEEE-eCCCCCceEEEEE
Confidence 1223456899999875555555555 58999998876544333 44567889999999654444 4433222455567
Q ss_pred cCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCC---CcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEE
Q 046451 250 MRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD---NRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISAS 326 (719)
Q Consensus 250 l~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~D---g~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~ 326 (719)
+.++ ....+..+........|+| |+++|+..+.+ ..|.+||+.+++.. .+... .......|+||| ..|+.+
T Consensus 318 ~~~g--~~~~lt~~~~~~~~~~~Sp-DG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~~SpDG-~~i~~~ 391 (429)
T PRK03629 318 INGG--APQRITWEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT-FLDETPSIAPNG-TMVIYS 391 (429)
T ss_pred CCCC--CeEEeecCCCCccCEEECC-CCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC-CCCCCceECCCC-CEEEEE
Confidence 6543 2344444444566789999 88888776543 35888999887644 33322 224578899999 566666
Q ss_pred eCCC---cEEEEeCCCCcccccCCCCCCCCCccCcceec
Q 046451 327 SFDG---KIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYK 362 (719)
Q Consensus 327 s~Dg---~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~ 362 (719)
+.++ .+.+++++++.......+. .....|.|.+
T Consensus 392 s~~~~~~~l~~~~~~G~~~~~l~~~~---~~~~~p~Wsp 427 (429)
T PRK03629 392 SSQGMGSVLNLVSTDGRFKARLPATD---GQVKFPAWSP 427 (429)
T ss_pred EcCCCceEEEEEECCCCCeEECccCC---CCcCCcccCC
Confidence 6565 3778888665543322211 2235666753
No 219
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.57 E-value=2.1e-12 Score=128.00 Aligned_cols=290 Identities=19% Similarity=0.267 Sum_probs=185.8
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceE
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLV 87 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~l 87 (719)
..+..++|++.-..+|++..|-.| +||+-+. .... .-.......|+|++|-|.+. ..|
T Consensus 99 ~dlr~~aWhqH~~~fava~nddvV----------riy~kss-t~pt----~Lks~sQrnvtclawRPlsa-------sel 156 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVATNDDVV----------RIYDKSS-TCPT----KLKSVSQRNVTCLAWRPLSA-------SEL 156 (445)
T ss_pred cceeeEeechhhhhhhhhccCcEE----------EEeccCC-CCCc----eecchhhcceeEEEeccCCc-------cee
Confidence 456778999977778888776655 7777654 1111 11234567899999999874 578
Q ss_pred EEEcCCCcEEEEcCCccccCCC-----CCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC-CCcEEEEcCCCCCCCCc
Q 046451 88 AGGLVDGSIDIWNPLSLISSGE-----TGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD-DGEICIWDLSAPAEPSH 161 (719)
Q Consensus 88 asgs~dg~I~lwd~~~~~~~~~-----~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~-dg~I~iwdl~~~~~~~~ 161 (719)
+.|+..| |.||..+....... ......+....+| ..|+++.|++ |+..|++++. |..|.|||..++..+..
T Consensus 157 avgCr~g-IciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~-dgt~l~tAS~gsssi~iWdpdtg~~~pL 233 (445)
T KOG2139|consen 157 AVGCRAG-ICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNE-DGTILVTASFGSSSIMIWDPDTGQKIPL 233 (445)
T ss_pred eeeecce-eEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcC-CCCEEeecccCcceEEEEcCCCCCcccc
Confidence 8887654 99998754322110 1011122233344 6899999999 6777877764 67899999999877644
Q ss_pred cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC-CceeEEecCCCCCceeEEEECCCCCcEEEEEeCCC
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK-QKPVISFSESIKRRCSVLQWNPDVATQLVVASDED 240 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~-~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~ 240 (719)
. . ..-+.++-+.|+|+| .+|++++-|+..++|+... .....-.. ..+.|...+|+|+|+.+|++++..-
T Consensus 234 ~----~---~glgg~slLkwSPdg-d~lfaAt~davfrlw~e~q~wt~erw~l--gsgrvqtacWspcGsfLLf~~sgsp 303 (445)
T KOG2139|consen 234 I----P---KGLGGFSLLKWSPDG-DVLFAATCDAVFRLWQENQSWTKERWIL--GSGRVQTACWSPCGSFLLFACSGSP 303 (445)
T ss_pred c----c---cCCCceeeEEEcCCC-CEEEEecccceeeeehhcccceecceec--cCCceeeeeecCCCCEEEEEEcCCc
Confidence 2 1 123478899999998 5888889999999996544 33333333 4559999999999988888777654
Q ss_pred CCCcEEEEecCCCCCc--------------eEEe------eC---CCCCeeEEEeCCCCCCeEEEEeCCC--------cE
Q 046451 241 SSPALRLWDMRNTMSP--------------VKEF------VG---HTKGVIAMSWCPNDSSYLLTCAKDN--------RT 289 (719)
Q Consensus 241 ~~~~I~lwDl~~~~~~--------------~~~~------~~---h~~~V~~v~~sp~d~~~l~sgs~Dg--------~I 289 (719)
++|.+.-..+. +..+ .+ -.+++.+++|.| .|.+|++.-+.+ .|
T Consensus 304 -----~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDp-sGeyLav~fKg~~~v~~~k~~i 377 (445)
T KOG2139|consen 304 -----RLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDP-SGEYLAVIFKGQSFVLLCKLHI 377 (445)
T ss_pred -----eEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECC-CCCEEEEEEcCCchhhhhhhhh
Confidence 44444211110 0111 01 135788999999 889988875443 46
Q ss_pred EEEECCCCeEEEEe----cCCCCCeEEeEEcC--CCCCEEEEEeCCCcEEEEeCCC
Q 046451 290 ICWDTVSGEIVSEL----PAGTNWNFDIHWYP--KIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 290 ~iwd~~~~~~~~~l----~~h~~~v~~l~~sp--dg~~~las~s~Dg~I~iwd~~~ 339 (719)
.+||.+..-.+.-. .+.. .-..++|++ +...+|..+-..|.|.-|++.-
T Consensus 378 ~~fdtr~sp~vels~cg~i~ge-~P~~IsF~pl~n~g~lLsiaWsTGriq~ypl~f 432 (445)
T KOG2139|consen 378 SRFDTRKSPPVELSYCGMIGGE-YPAYISFGPLKNEGRLLSIAWSTGRIQRYPLTF 432 (445)
T ss_pred hhhcccccCceEEEecccccCC-CCceEEeeecccCCcEEEEEeccCceEeeeeEE
Confidence 77887654332222 1111 133445544 3335777777788888887754
No 220
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.56 E-value=1.2e-12 Score=144.40 Aligned_cols=237 Identities=12% Similarity=0.116 Sum_probs=155.5
Q ss_pred cEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC---CCcEEEEcCCCCCCCCccCCccCCCCC
Q 046451 95 SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD---DGEICIWDLSAPAEPSHFPPLRGNGSA 171 (719)
Q Consensus 95 ~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~---dg~I~iwdl~~~~~~~~~~~l~~~~~~ 171 (719)
.|.+||.+ + .....+..|...+.+.+|+| |++.|+..+. +..|++||+.+++.. .+ ..
T Consensus 183 ~l~~~d~d-------g---~~~~~lt~~~~~v~~p~wSp-DG~~lay~s~~~g~~~i~~~dl~~g~~~-~l-------~~ 243 (435)
T PRK05137 183 RLAIMDQD-------G---ANVRYLTDGSSLVLTPRFSP-NRQEITYMSYANGRPRVYLLDLETGQRE-LV-------GN 243 (435)
T ss_pred EEEEECCC-------C---CCcEEEecCCCCeEeeEECC-CCCEEEEEEecCCCCEEEEEECCCCcEE-Ee-------ec
Confidence 68888863 2 44556677888999999999 7787777653 468999999876542 11 12
Q ss_pred CCCCeEEEEecCCCCcEEEEEeCCCc--EEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEe
Q 046451 172 AQGEISFVSWNSKVQHILASTSYNGT--TVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWD 249 (719)
Q Consensus 172 h~~~I~~l~~sp~g~~~l~s~s~dg~--I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwD 249 (719)
+.+.+...+|+++|..++++.+.++. |++||+.+++.. .+. .+........|+|||+.++ ..++.++...|++||
T Consensus 244 ~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~Lt-~~~~~~~~~~~spDG~~i~-f~s~~~g~~~Iy~~d 320 (435)
T PRK05137 244 FPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTT-RLT-DSPAIDTSPSYSPDGSQIV-FESDRSGSPQLYVMN 320 (435)
T ss_pred CCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceE-Ecc-CCCCccCceeEcCCCCEEE-EEECCCCCCeEEEEE
Confidence 33466788999999766667776665 778898877653 344 3455567789999996544 444433334788889
Q ss_pred cCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCC---CcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEE
Q 046451 250 MRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD---NRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISAS 326 (719)
Q Consensus 250 l~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~D---g~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~ 326 (719)
+... . .+.+..+...+....|+| |+++|+..+.+ ..|.+||+..+.. ..+.. ...+..+.|+|||..++++.
T Consensus 321 ~~g~-~-~~~lt~~~~~~~~~~~Sp-dG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~-~~~~~~p~~spDG~~i~~~~ 395 (435)
T PRK05137 321 ADGS-N-PRRISFGGGRYSTPVWSP-RGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTS-GFLVEGPTWAPNGRVIMFFR 395 (435)
T ss_pred CCCC-C-eEEeecCCCcccCeEECC-CCCEEEEEEcCCCceEEEEEECCCCce-EeccC-CCCCCCCeECCCCCEEEEEE
Confidence 8653 2 344444455677789999 88888776543 3688889865543 33332 22467899999995444544
Q ss_pred eCC-----CcEEEEeCCCCcccccCCCCCCCCCccCcceec
Q 046451 327 SFD-----GKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYK 362 (719)
Q Consensus 327 s~D-----g~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~ 362 (719)
... ..|.++|+.++....... . .....|.|..
T Consensus 396 ~~~~~~~~~~L~~~dl~g~~~~~l~~-~---~~~~~p~Wsp 432 (435)
T PRK05137 396 QTPGSGGAPKLYTVDLTGRNEREVPT-P---GDASDPAWSP 432 (435)
T ss_pred ccCCCCCcceEEEEECCCCceEEccC-C---CCccCcccCC
Confidence 433 358888887765543221 1 1235677764
No 221
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.56 E-value=1.9e-14 Score=146.54 Aligned_cols=270 Identities=16% Similarity=0.217 Sum_probs=201.7
Q ss_pred cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 10 SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 10 V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
-+.+.|+.+|++|+.|+..|.| -.+|+.+... ...+.-.+.|.++.|..+. +++|+
T Consensus 132 PY~~~ytrnGrhlllgGrKGHl----------Aa~Dw~t~~L------~~Ei~v~Etv~Dv~~LHne--------q~~AV 187 (545)
T KOG1272|consen 132 PYHLDYTRNGRHLLLGGRKGHL----------AAFDWVTKKL------HFEINVMETVRDVTFLHNE--------QFFAV 187 (545)
T ss_pred CeeeeecCCccEEEecCCccce----------eeeeccccee------eeeeehhhhhhhhhhhcch--------HHHHh
Confidence 4578999999999999988876 6677775443 3344567789999999886 67776
Q ss_pred EcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCC
Q 046451 90 GLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNG 169 (719)
Q Consensus 90 gs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~ 169 (719)
+ ....++||| ..| ..+..++.| ..|..+.|.| .--+|++++..|.++--|+.+++.+..+.
T Consensus 188 A-QK~y~yvYD-------~~G---tElHClk~~-~~v~rLeFLP-yHfLL~~~~~~G~L~Y~DVS~GklVa~~~------ 248 (545)
T KOG1272|consen 188 A-QKKYVYVYD-------NNG---TELHCLKRH-IRVARLEFLP-YHFLLVAASEAGFLKYQDVSTGKLVASIR------ 248 (545)
T ss_pred h-hhceEEEec-------CCC---cEEeehhhc-Cchhhhcccc-hhheeeecccCCceEEEeechhhhhHHHH------
Confidence 6 467899999 455 667777655 5688999999 55678889999999999999999877642
Q ss_pred CCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEe
Q 046451 170 SAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWD 249 (719)
Q Consensus 170 ~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwD 249 (719)
...+.+..++-+|-+ .++-+|..+|+|.+|.-...+++..+. .|.+.|.+|+++++| +++++++.|. .|+|||
T Consensus 249 -t~~G~~~vm~qNP~N-aVih~GhsnGtVSlWSP~skePLvKiL-cH~g~V~siAv~~~G-~YMaTtG~Dr---~~kIWD 321 (545)
T KOG1272|consen 249 -TGAGRTDVMKQNPYN-AVIHLGHSNGTVSLWSPNSKEPLVKIL-CHRGPVSSIAVDRGG-RYMATTGLDR---KVKIWD 321 (545)
T ss_pred -ccCCccchhhcCCcc-ceEEEcCCCceEEecCCCCcchHHHHH-hcCCCcceEEECCCC-cEEeeccccc---ceeEee
Confidence 124477788888886 488899999999999999999888888 799999999999999 5788888887 899999
Q ss_pred cCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEE-ECCCCe--EEEEecCC--CCCeEEeEEcCCCCCEEE
Q 046451 250 MRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW-DTVSGE--IVSELPAG--TNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 250 l~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iw-d~~~~~--~~~~l~~h--~~~v~~l~~spdg~~~la 324 (719)
+|+..+ +.++.. ......++||. +-+++++....|.|| |.-.+. ...-+-.| ...|.++.|.|-. .+|-
T Consensus 322 lR~~~q-l~t~~t-p~~a~~ls~Sq---kglLA~~~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~E-DvLG 395 (545)
T KOG1272|consen 322 LRNFYQ-LHTYRT-PHPASNLSLSQ---KGLLALSYGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYE-DVLG 395 (545)
T ss_pred eccccc-cceeec-CCCcccccccc---ccceeeecCCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHH-Heee
Confidence 998753 344433 34667788885 334455666789999 333321 11111122 2379999999986 6777
Q ss_pred EEeCCCcEEEE
Q 046451 325 ASSFDGKIGIY 335 (719)
Q Consensus 325 s~s~Dg~I~iw 335 (719)
.|-..|.-.|.
T Consensus 396 IGH~~G~tsil 406 (545)
T KOG1272|consen 396 IGHAGGITSIL 406 (545)
T ss_pred ccccCCceeEe
Confidence 77666644443
No 222
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.56 E-value=6.1e-14 Score=141.99 Aligned_cols=198 Identities=20% Similarity=0.249 Sum_probs=149.6
Q ss_pred eeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCc
Q 046451 68 NRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGE 147 (719)
Q Consensus 68 ~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~ 147 (719)
.+++|+.+| ..|++|+.||.+|||+... . ..+.....|.+.|.++.|++ |+++|++.+.| .
T Consensus 148 k~vaf~~~g--------s~latgg~dg~lRv~~~Ps------~---~t~l~e~~~~~eV~DL~FS~-dgk~lasig~d-~ 208 (398)
T KOG0771|consen 148 KVVAFNGDG--------SKLATGGTDGTLRVWEWPS------M---LTILEEIAHHAEVKDLDFSP-DGKFLASIGAD-S 208 (398)
T ss_pred eEEEEcCCC--------CEeeeccccceEEEEecCc------c---hhhhhhHhhcCccccceeCC-CCcEEEEecCC-c
Confidence 578899988 7999999999999999732 2 45566677999999999999 89999999999 9
Q ss_pred EEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCC---CcEEE-EEeCCCcEEEEECCCCce-----eEEecCCCCC
Q 046451 148 ICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKV---QHILA-STSYNGTTVVWDLKKQKP-----VISFSESIKR 218 (719)
Q Consensus 148 I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g---~~~l~-s~s~dg~I~iwd~~~~~~-----~~~~~~~~~~ 218 (719)
.+||+++++..+....+ ......+..+.|+.++ ..+++ .....+.|+.||+...+. ..+.. ....
T Consensus 209 ~~VW~~~~g~~~a~~t~-----~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~-~~~~ 282 (398)
T KOG0771|consen 209 ARVWSVNTGAALARKTP-----FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKI-KRFK 282 (398)
T ss_pred eEEEEeccCchhhhcCC-----cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhh-hccC
Confidence 99999999866544321 2234456677787664 11233 233456677777654322 11111 2345
Q ss_pred ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 219 RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 219 ~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
.|++++.+.+| ++++.|+.++ .|.|++..+.......-+.|..-|+.+.|+| |.+++++.+.|.++.|..+.
T Consensus 283 siSsl~VS~dG-kf~AlGT~dG---sVai~~~~~lq~~~~vk~aH~~~VT~ltF~P-dsr~~~svSs~~~~~v~~l~ 354 (398)
T KOG0771|consen 283 SISSLAVSDDG-KFLALGTMDG---SVAIYDAKSLQRLQYVKEAHLGFVTGLTFSP-DSRYLASVSSDNEAAVTKLA 354 (398)
T ss_pred cceeEEEcCCC-cEEEEeccCC---cEEEEEeceeeeeEeehhhheeeeeeEEEcC-CcCcccccccCCceeEEEEe
Confidence 89999999999 5899999988 8999999765444444567999999999999 99999999999998888764
No 223
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.54 E-value=1.2e-12 Score=126.70 Aligned_cols=299 Identities=16% Similarity=0.156 Sum_probs=197.7
Q ss_pred CCeEEEeeccceee-c-ccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcE
Q 046451 19 APYMAAGTMAGAVD-L-SFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSI 96 (719)
Q Consensus 19 g~~Latgs~dG~v~-v-~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I 96 (719)
-+.||+|++.=.=- . ..-..+.+.+|++...+... +..+... ....++.+.|...+.+.. -.++-+..+|.|
T Consensus 24 ~~vLa~GTY~Lde~d~~smvR~Gkl~Lys~~d~~~~~-l~~~q~~-dts~~~dm~w~~~~~~g~----~~l~~a~a~G~i 97 (339)
T KOG0280|consen 24 RNVLAAGTYLLDEGDYPSMVRSGKLHLYSLEDMKLSP-LDTLQCT-DTSTEFDMLWRIRETDGD----FNLLDAHARGQI 97 (339)
T ss_pred cceEEEeeEEecCCCCchheeccceEEEeecccccCc-cceeeee-cccccceeeeeeccCCcc----ceeeeccccceE
Confidence 35888886531100 0 00145778889887655444 3233322 345678889986543321 267777788999
Q ss_pred EEEcCCccccCCCCCCCCceeeecc---ccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCC
Q 046451 97 DIWNPLSLISSGETGGNPLIAHLSR---HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQ 173 (719)
Q Consensus 97 ~lwd~~~~~~~~~~~~~~~~~~l~~---h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~ 173 (719)
.++........ ..+..+.. ......++.|+. .+..++++..+|.+.+-+....... ... ..+.|+
T Consensus 98 ~~~r~~~~~ss------~~L~~ls~~ki~~~~~lslD~~~-~~~~i~vs~s~G~~~~v~~t~~~le-~vq----~wk~He 165 (339)
T KOG0280|consen 98 QLYRNDEDESS------VHLRGLSSKKISVVEALSLDIST-SGTKIFVSDSRGSISGVYETEMVLE-KVQ----TWKVHE 165 (339)
T ss_pred EEEeeccceee------eeecccchhhhhheeeeEEEeec-cCceEEEEcCCCcEEEEecceeeee-ecc----cccccc
Confidence 99987432211 11111111 111345788888 6778999999999986554433221 111 234578
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEEECC-CCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC
Q 046451 174 GEISFVSWNSKVQHILASTSYNGTTVVWDLK-KQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN 252 (719)
Q Consensus 174 ~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~-~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~ 252 (719)
-+++...|+....+++.+|++|+.+..||+| .++.+..-...|...|.+|.-++.....+++|+.|+ .|++||.|+
T Consensus 166 ~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe---~i~~~DtRn 242 (339)
T KOG0280|consen 166 FEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDE---CIRVLDTRN 242 (339)
T ss_pred eeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEecccc---ceeeeehhc
Confidence 8999999998877899999999999999999 445555533368889999999998889999999999 999999998
Q ss_pred CCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC--e---EEEEecCCCCCeEEeEEcCCCCCEEEEEe
Q 046451 253 TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG--E---IVSELPAGTNWNFDIHWYPKIPGVISASS 327 (719)
Q Consensus 253 ~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~--~---~~~~l~~h~~~v~~l~~spdg~~~las~s 327 (719)
-.+++..-. -.++|+.+.++|.....|+.++.-+-.+|-+...+ + .+...+.|.+-++.-.|.... .+|+||+
T Consensus 243 m~kPl~~~~-v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~-~~lATCs 320 (339)
T KOG0280|consen 243 MGKPLFKAK-VGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKD-SFLATCS 320 (339)
T ss_pred ccCccccCc-cccceEEEEecchhhhHHHHHHHhcCceEEEecccccchheeeeccccccceeecccccccc-ceeeeee
Confidence 777765443 33899999999955544455555555677776543 3 344456777777888885553 5788876
Q ss_pred -CCCcEE-EEeCCCC
Q 046451 328 -FDGKIG-IYNIEGC 340 (719)
Q Consensus 328 -~Dg~I~-iwd~~~~ 340 (719)
.|+.|+ +|-.-++
T Consensus 321 FYDk~~~~~Wl~~t~ 335 (339)
T KOG0280|consen 321 FYDKKIRQLWLHITG 335 (339)
T ss_pred ccccceeeeeeeccC
Confidence 366644 6755443
No 224
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.54 E-value=2.5e-12 Score=141.76 Aligned_cols=222 Identities=15% Similarity=0.136 Sum_probs=145.0
Q ss_pred CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC---CcEEEEcCCCCCCCCccCCccCCCC
Q 046451 94 GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD---GEICIWDLSAPAEPSHFPPLRGNGS 170 (719)
Q Consensus 94 g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d---g~I~iwdl~~~~~~~~~~~l~~~~~ 170 (719)
..|.+||.+ + .....+..+...+.+.+|+| |++.|+..+.+ ..|++||+.+++.... .
T Consensus 184 ~~l~i~D~~-------g---~~~~~lt~~~~~v~~p~wSp-Dg~~la~~s~~~~~~~l~~~dl~~g~~~~l----~---- 244 (433)
T PRK04922 184 YALQVADSD-------G---YNPQTILRSAEPILSPAWSP-DGKKLAYVSFERGRSAIYVQDLATGQRELV----A---- 244 (433)
T ss_pred EEEEEECCC-------C---CCceEeecCCCccccccCCC-CCCEEEEEecCCCCcEEEEEECCCCCEEEe----c----
Confidence 358888873 2 33455666778899999999 78888877643 4699999987654211 1
Q ss_pred CCCCCeEEEEecCCCCcEEEEEeCCC--cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEE
Q 046451 171 AAQGEISFVSWNSKVQHILASTSYNG--TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLW 248 (719)
Q Consensus 171 ~h~~~I~~l~~sp~g~~~l~s~s~dg--~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lw 248 (719)
...+...++.|+++|..++++.+.+| .|++||+.+++.. .+. .+.......+|++||+.++++ ++.++...|+++
T Consensus 245 ~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~-~lt-~~~~~~~~~~~spDG~~l~f~-sd~~g~~~iy~~ 321 (433)
T PRK04922 245 SFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLT-RLT-NHFGIDTEPTWAPDGKSIYFT-SDRGGRPQIYRV 321 (433)
T ss_pred cCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeE-ECc-cCCCCccceEECCCCCEEEEE-ECCCCCceEEEE
Confidence 12234457899999976666666666 5999999887643 343 344455678999999654444 443322357777
Q ss_pred ecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCC---cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEE
Q 046451 249 DMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDN---RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISA 325 (719)
Q Consensus 249 Dl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg---~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las 325 (719)
|+.++. ...+..+......++|+| |+++|+..+.++ .|.+||+.+++.. .+. +........|++||..++++
T Consensus 322 dl~~g~--~~~lt~~g~~~~~~~~Sp-DG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~ 396 (433)
T PRK04922 322 AASGGS--AERLTFQGNYNARASVSP-DGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYA 396 (433)
T ss_pred ECCCCC--eEEeecCCCCccCEEECC-CCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEE
Confidence 876543 233333334455789999 888887765433 6999999887755 343 22345678999999544444
Q ss_pred EeCC--CcEEEEeCCCCcc
Q 046451 326 SSFD--GKIGIYNIEGCSR 342 (719)
Q Consensus 326 ~s~D--g~I~iwd~~~~~~ 342 (719)
.... +.|.++++.++..
T Consensus 397 s~~~g~~~L~~~~~~g~~~ 415 (433)
T PRK04922 397 TREGGRGVLAAVSTDGRVR 415 (433)
T ss_pred EecCCceEEEEEECCCCce
Confidence 4433 4677888866543
No 225
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.53 E-value=2.3e-12 Score=141.58 Aligned_cols=218 Identities=11% Similarity=0.129 Sum_probs=136.2
Q ss_pred cEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC---CcEEEEcCCCCCCCCccCCccCCCCC
Q 046451 95 SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD---GEICIWDLSAPAEPSHFPPLRGNGSA 171 (719)
Q Consensus 95 ~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d---g~I~iwdl~~~~~~~~~~~l~~~~~~ 171 (719)
.|.+||.+ + .....+..+...+.+.+|+| |++.|+..+.+ ..|++||+.+++.... . .
T Consensus 177 ~L~~~D~d-------G---~~~~~l~~~~~~v~~p~wSP-DG~~la~~s~~~~~~~I~~~dl~~g~~~~l----~----~ 237 (427)
T PRK02889 177 QLQISDAD-------G---QNAQSALSSPEPIISPAWSP-DGTKLAYVSFESKKPVVYVHDLATGRRRVV----A----N 237 (427)
T ss_pred EEEEECCC-------C---CCceEeccCCCCcccceEcC-CCCEEEEEEccCCCcEEEEEECCCCCEEEe----e----c
Confidence 56666652 2 33445556778899999999 77877776643 3599999987754221 1 1
Q ss_pred CCCCeEEEEecCCCCcEEEEEeCCCcEEEEE--CCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEe
Q 046451 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWD--LKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWD 249 (719)
Q Consensus 172 h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd--~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwD 249 (719)
..+.+.+..|+++|..++++.+.+|...||. +.++. ...+. .+........|++||+.+++++..++ ...|+++|
T Consensus 238 ~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt-~~~~~~~~~~wSpDG~~l~f~s~~~g-~~~Iy~~~ 314 (427)
T PRK02889 238 FKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLT-QSSGIDTEPFFSPDGRSIYFTSDRGG-APQIYRMP 314 (427)
T ss_pred CCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECC-CCCCCCcCeEEcCCCCEEEEEecCCC-CcEEEEEE
Confidence 2235568999999876666777788766654 44443 44444 34445667899999976555443333 22344444
Q ss_pred cCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCC---cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEE
Q 046451 250 MRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDN---RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISAS 326 (719)
Q Consensus 250 l~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg---~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~ 326 (719)
+.++ ....+..+.......+|+| |+++|+..+.++ .|.+||+.+++... +..+ .......|+|||..++++.
T Consensus 315 ~~~g--~~~~lt~~g~~~~~~~~Sp-DG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~-~~~~~p~~spdg~~l~~~~ 389 (427)
T PRK02889 315 ASGG--AAQRVTFTGSYNTSPRISP-DGKLLAYISRVGGAFKLYVQDLATGQVTA-LTDT-TRDESPSFAPNGRYILYAT 389 (427)
T ss_pred CCCC--ceEEEecCCCCcCceEECC-CCCEEEEEEccCCcEEEEEEECCCCCeEE-ccCC-CCccCceECCCCCEEEEEE
Confidence 4433 2233322333445688999 888888776554 69999998887543 3322 2356789999995555555
Q ss_pred eCCCc--EEEEeCCC
Q 046451 327 SFDGK--IGIYNIEG 339 (719)
Q Consensus 327 s~Dg~--I~iwd~~~ 339 (719)
..+|. +.+.++.+
T Consensus 390 ~~~g~~~l~~~~~~g 404 (427)
T PRK02889 390 QQGGRSVLAAVSSDG 404 (427)
T ss_pred ecCCCEEEEEEECCC
Confidence 54444 55556643
No 226
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.53 E-value=2.4e-14 Score=145.82 Aligned_cols=231 Identities=16% Similarity=0.213 Sum_probs=183.1
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
..-..+.++.+| +.|+.|+..|.|..+|. .+. .+...+. -...|.++.|.. +.++||++ .
T Consensus 130 FGPY~~~ytrnG--------rhlllgGrKGHlAa~Dw------~t~---~L~~Ei~-v~Etv~Dv~~LH-neq~~AVA-Q 189 (545)
T KOG1272|consen 130 FGPYHLDYTRNG--------RHLLLGGRKGHLAAFDW------VTK---KLHFEIN-VMETVRDVTFLH-NEQFFAVA-Q 189 (545)
T ss_pred cCCeeeeecCCc--------cEEEecCCccceeeeec------ccc---eeeeeee-hhhhhhhhhhhc-chHHHHhh-h
Confidence 345678889888 79999999999999998 344 4444444 356788999987 66666665 4
Q ss_pred CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEE
Q 046451 145 DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQ 224 (719)
Q Consensus 145 dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~ 224 (719)
...++|||-..- .+.. ++ ....|..+.|-|.. .+|++++..|.++.-|+.+|+.+..+. ...+.+..++
T Consensus 190 K~y~yvYD~~Gt-ElHC---lk-----~~~~v~rLeFLPyH-fLL~~~~~~G~L~Y~DVS~GklVa~~~-t~~G~~~vm~ 258 (545)
T KOG1272|consen 190 KKYVYVYDNNGT-ELHC---LK-----RHIRVARLEFLPYH-FLLVAASEAGFLKYQDVSTGKLVASIR-TGAGRTDVMK 258 (545)
T ss_pred hceEEEecCCCc-EEee---hh-----hcCchhhhcccchh-heeeecccCCceEEEeechhhhhHHHH-ccCCccchhh
Confidence 578999996543 2222 22 23378899999984 688889999999999999999999988 6778888899
Q ss_pred ECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec
Q 046451 225 WNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP 304 (719)
Q Consensus 225 ~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~ 304 (719)
-+|-+ .++-+|...| +|.+|.... .+++..+..|.+.|.+|++.+ +|.|++|.+.|..++|||++....+.++.
T Consensus 259 qNP~N-aVih~GhsnG---tVSlWSP~s-kePLvKiLcH~g~V~siAv~~-~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~ 332 (545)
T KOG1272|consen 259 QNPYN-AVIHLGHSNG---TVSLWSPNS-KEPLVKILCHRGPVSSIAVDR-GGRYMATTGLDRKVKIWDLRNFYQLHTYR 332 (545)
T ss_pred cCCcc-ceEEEcCCCc---eEEecCCCC-cchHHHHHhcCCCcceEEECC-CCcEEeecccccceeEeeeccccccceee
Confidence 99986 4777777777 999999865 477777888999999999999 99999999999999999999988777766
Q ss_pred CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEe
Q 046451 305 AGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336 (719)
Q Consensus 305 ~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd 336 (719)
. ......++||..| +||.+ ....|.||.
T Consensus 333 t-p~~a~~ls~Sqkg--lLA~~-~G~~v~iw~ 360 (545)
T KOG1272|consen 333 T-PHPASNLSLSQKG--LLALS-YGDHVQIWK 360 (545)
T ss_pred c-CCCcccccccccc--ceeee-cCCeeeeeh
Confidence 5 3346788999887 45544 456899995
No 227
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.51 E-value=2.7e-12 Score=137.02 Aligned_cols=286 Identities=14% Similarity=0.151 Sum_probs=175.9
Q ss_pred eEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEE-
Q 046451 12 SVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGG- 90 (719)
Q Consensus 12 ~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasg- 90 (719)
.+.|++||+++.+.+.||.| .++|+...+...+ ........++++++|| ++++++
T Consensus 41 ~~~~s~Dgr~~yv~~rdg~v----------sviD~~~~~~v~~------i~~G~~~~~i~~s~DG--------~~~~v~n 96 (369)
T PF02239_consen 41 GLKFSPDGRYLYVANRDGTV----------SVIDLATGKVVAT------IKVGGNPRGIAVSPDG--------KYVYVAN 96 (369)
T ss_dssp EEE-TT-SSEEEEEETTSEE----------EEEETTSSSEEEE------EE-SSEEEEEEE--TT--------TEEEEEE
T ss_pred EEEecCCCCEEEEEcCCCeE----------EEEECCcccEEEE------EecCCCcceEEEcCCC--------CEEEEEe
Confidence 46899999999999887766 7899886654333 3345567899999998 555554
Q ss_pred cCCCcEEEEcCCccccCCCCCCCCceeeecc-------ccCCEEEEEEeCCCCC-EEEEEeCCCcEEEEcCCCCCCCCcc
Q 046451 91 LVDGSIDIWNPLSLISSGETGGNPLIAHLSR-------HKGPVRGLEFNSFTPN-LLASGADDGEICIWDLSAPAEPSHF 162 (719)
Q Consensus 91 s~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~-------h~~~V~~l~fsp~~~~-~lasgs~dg~I~iwdl~~~~~~~~~ 162 (719)
..++.+.++|.+ +. +.++.+.. ....+..|..++ ... ++++.-+.+.|.+.|....+....
T Consensus 97 ~~~~~v~v~D~~------tl---e~v~~I~~~~~~~~~~~~Rv~aIv~s~-~~~~fVv~lkd~~~I~vVdy~d~~~~~~- 165 (369)
T PF02239_consen 97 YEPGTVSVIDAE------TL---EPVKTIPTGGMPVDGPESRVAAIVASP-GRPEFVVNLKDTGEIWVVDYSDPKNLKV- 165 (369)
T ss_dssp EETTEEEEEETT------T-----EEEEEE--EE-TTTS---EEEEEE-S-SSSEEEEEETTTTEEEEEETTTSSCEEE-
T ss_pred cCCCceeEeccc------cc---cceeecccccccccccCCCceeEEecC-CCCEEEEEEccCCeEEEEEeccccccce-
Confidence 578999999984 33 55555432 234677888788 455 445555558888888776543211
Q ss_pred CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC---CCCCceeEE-------EEC--CCCC
Q 046451 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE---SIKRRCSVL-------QWN--PDVA 230 (719)
Q Consensus 163 ~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~---~~~~~i~~l-------~~s--p~g~ 230 (719)
.............|+++++.++++...+..|.++|.++++.+..+.. .|......+ .|. ..+.
T Consensus 166 -----~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~ 240 (369)
T PF02239_consen 166 -----TTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGY 240 (369)
T ss_dssp -----EEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSS
T ss_pred -----eeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccc
Confidence 01112335678999999866666667788999999999887766543 122233222 121 1222
Q ss_pred cEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEE----eCCCcEEEEECCCCeEEEEecCC
Q 046451 231 TQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC----AKDNRTICWDTVSGEIVSELPAG 306 (719)
Q Consensus 231 ~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sg----s~Dg~I~iwd~~~~~~~~~l~~h 306 (719)
..+..-+.+ .+.+||..+ .+.++++.....+ .-+..+| ++++|.+. ..++.|.++|.++.+.+..+...
T Consensus 241 ~~~~~ig~~----~v~v~d~~~-wkvv~~I~~~G~g-lFi~thP-~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~ 313 (369)
T PF02239_consen 241 FAIPLIGTD----PVSVHDDYA-WKVVKTIPTQGGG-LFIKTHP-DSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPG 313 (369)
T ss_dssp SEEEEEE------TTT-STTTB-TSEEEEEE-SSSS---EE--T-T-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHH
T ss_pred eecccccCC----ccccchhhc-CeEEEEEECCCCc-ceeecCC-CCccEEeeccCCCCCceEEEEECcCcceeEEEecc
Confidence 222223333 466788766 4778888876666 7788899 88999888 45589999999999888887532
Q ss_pred -CCCeEEeEEcCCCCCEEEEEeCCC-cEEEEeCCCCcccc
Q 046451 307 -TNWNFDIHWYPKIPGVISASSFDG-KIGIYNIEGCSRYG 344 (719)
Q Consensus 307 -~~~v~~l~~spdg~~~las~s~Dg-~I~iwd~~~~~~~~ 344 (719)
...+..+.|++||..+.+|...++ .|.|||..+.+...
T Consensus 314 ~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~ 353 (369)
T PF02239_consen 314 PGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKK 353 (369)
T ss_dssp HT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEE
T ss_pred CCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEEE
Confidence 235899999999976666666555 89999999998876
No 228
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.51 E-value=3.3e-12 Score=140.28 Aligned_cols=239 Identities=13% Similarity=0.124 Sum_probs=150.6
Q ss_pred ceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEc---CCCcEEEEcCCccccCCCCCCCCc
Q 046451 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGL---VDGSIDIWNPLSLISSGETGGNPL 115 (719)
Q Consensus 39 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs---~dg~I~lwd~~~~~~~~~~~~~~~ 115 (719)
..|.+||.+.... ..+ ..+...+.+.+|+||| +.|+..+ .+..|++|++.. + +
T Consensus 179 ~~l~~~d~dg~~~-~~l-----t~~~~~~~~p~wSPDG--------~~la~~s~~~g~~~i~i~dl~~------G---~- 234 (429)
T PRK03629 179 YELRVSDYDGYNQ-FVV-----HRSPQPLMSPAWSPDG--------SKLAYVTFESGRSALVIQTLAN------G---A- 234 (429)
T ss_pred eeEEEEcCCCCCC-EEe-----ecCCCceeeeEEcCCC--------CEEEEEEecCCCcEEEEEECCC------C---C-
Confidence 4567777664332 111 2355678999999998 5666543 245789999832 2 1
Q ss_pred eeeeccccCCEEEEEEeCCCCCEEEEE-eCCC--cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEE
Q 046451 116 IAHLSRHKGPVRGLEFNSFTPNLLASG-ADDG--EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILAST 192 (719)
Q Consensus 116 ~~~l~~h~~~V~~l~fsp~~~~~lasg-s~dg--~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~ 192 (719)
...+....+.+..+.|+| |++.|+.. +.+| .|++||+.+++.... . .+...+....|+++|..++++.
T Consensus 235 ~~~l~~~~~~~~~~~~SP-DG~~La~~~~~~g~~~I~~~d~~tg~~~~l----t----~~~~~~~~~~wSPDG~~I~f~s 305 (429)
T PRK03629 235 VRQVASFPRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQIRQV----T----DGRSNNTEPTWFPDSQNLAYTS 305 (429)
T ss_pred eEEccCCCCCcCCeEECC-CCCEEEEEEcCCCCcEEEEEECCCCCEEEc----c----CCCCCcCceEECCCCCEEEEEe
Confidence 122222333455789999 67766644 4455 588999987653221 1 1233567899999986444444
Q ss_pred eCCCc--EEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEE
Q 046451 193 SYNGT--TVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAM 270 (719)
Q Consensus 193 s~dg~--I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v 270 (719)
..++. |+++|+.+++.. .+. ..........|+|||+.+++++..+ ....|++||+.++. ...+... ......
T Consensus 306 ~~~g~~~Iy~~d~~~g~~~-~lt-~~~~~~~~~~~SpDG~~Ia~~~~~~-g~~~I~~~dl~~g~--~~~Lt~~-~~~~~p 379 (429)
T PRK03629 306 DQAGRPQVYKVNINGGAPQ-RIT-WEGSQNQDADVSSDGKFMVMVSSNG-GQQHIAKQDLATGG--VQVLTDT-FLDETP 379 (429)
T ss_pred CCCCCceEEEEECCCCCeE-Eee-cCCCCccCEEECCCCCEEEEEEccC-CCceEEEEECCCCC--eEEeCCC-CCCCCc
Confidence 44454 555577666543 333 2344566789999997554444433 33468999997653 3333322 234568
Q ss_pred EeCCCCCCeEEEEeCCCc---EEEEECCCCeEEEEecCCCCCeEEeEEcCC
Q 046451 271 SWCPNDSSYLLTCAKDNR---TICWDTVSGEIVSELPAGTNWNFDIHWYPK 318 (719)
Q Consensus 271 ~~sp~d~~~l~sgs~Dg~---I~iwd~~~~~~~~~l~~h~~~v~~l~~spd 318 (719)
.|+| |+++|+.++.++. +.++++ +|+....+..|...+...+|+|-
T Consensus 380 ~~Sp-DG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~~~~~~p~Wsp~ 428 (429)
T PRK03629 380 SIAP-NGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVKFPAWSPY 428 (429)
T ss_pred eECC-CCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCCCCcCCcccCCC
Confidence 8999 9999988887764 677787 56667778888888999999973
No 229
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.51 E-value=1.6e-11 Score=120.16 Aligned_cols=242 Identities=15% Similarity=0.213 Sum_probs=160.5
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
+.....+++|+.|...+++|..+|- +||+++--.+.... ......-.+..+-|-. +
T Consensus 4 ~~~~~lsvs~NQD~ScFava~~~Gf-----------riyn~~P~ke~~~r---~~~~~G~~~veMLfR~----------N 59 (346)
T KOG2111|consen 4 EEPKTLSVSFNQDHSCFAVATDTGF-----------RIYNCDPFKESASR---QFIDGGFKIVEMLFRS----------N 59 (346)
T ss_pred ccCceeEEEEccCCceEEEEecCce-----------EEEecCchhhhhhh---ccccCchhhhhHhhhh----------c
Confidence 3445567999999999999987773 88988742221111 1111112233333332 3
Q ss_pred eEE-EEcCC------CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCC-C
Q 046451 86 LVA-GGLVD------GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAP-A 157 (719)
Q Consensus 86 ~la-sgs~d------g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~-~ 157 (719)
+|+ +|+.+ ..|.|||= ... .++..+. ....|.++.+.. +.|++.- ++.|+||...+. +
T Consensus 60 ~laLVGGg~~pky~pNkviIWDD------~k~---~~i~el~-f~~~I~~V~l~r---~riVvvl-~~~I~VytF~~n~k 125 (346)
T KOG2111|consen 60 YLALVGGGSRPKYPPNKVIIWDD------LKE---RCIIELS-FNSEIKAVKLRR---DRIVVVL-ENKIYVYTFPDNPK 125 (346)
T ss_pred eEEEecCCCCCCCCCceEEEEec------ccC---cEEEEEE-eccceeeEEEcC---CeEEEEe-cCeEEEEEcCCChh
Confidence 444 34333 57999993 223 5555555 568899999965 4565554 478999998743 3
Q ss_pred CCCccCCccCCCCCCCCCeEEEEecCCCCcEEEE-EeCCCcEEEEECCCCce--eEEecCCCCCceeEEEECCCCCcEEE
Q 046451 158 EPSHFPPLRGNGSAAQGEISFVSWNSKVQHILAS-TSYNGTTVVWDLKKQKP--VISFSESIKRRCSVLQWNPDVATQLV 234 (719)
Q Consensus 158 ~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s-~s~dg~I~iwd~~~~~~--~~~~~~~~~~~i~~l~~sp~g~~~l~ 234 (719)
....+ ... .....+.+++-+.+. .+|+. |-.-|.|.|-|+...+. ...+. .|...|.|++.+-+| .+++
T Consensus 126 ~l~~~---et~--~NPkGlC~~~~~~~k-~~LafPg~k~GqvQi~dL~~~~~~~p~~I~-AH~s~Iacv~Ln~~G-t~vA 197 (346)
T KOG2111|consen 126 LLHVI---ETR--SNPKGLCSLCPTSNK-SLLAFPGFKTGQVQIVDLASTKPNAPSIIN-AHDSDIACVALNLQG-TLVA 197 (346)
T ss_pred heeee---ecc--cCCCceEeecCCCCc-eEEEcCCCccceEEEEEhhhcCcCCceEEE-cccCceeEEEEcCCc-cEEE
Confidence 33322 111 112234444443332 24443 44569999999987665 24444 799999999999999 6899
Q ss_pred EEeCCCCCCcEEEEecCCCCCceEEeeC--CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC
Q 046451 235 VASDEDSSPALRLWDMRNTMSPVKEFVG--HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297 (719)
Q Consensus 235 ~~s~d~~~~~I~lwDl~~~~~~~~~~~~--h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~ 297 (719)
+++..|. .|||||.+++ +.+.++.. ....|.+|+||| +..+|+++|+.|+|+||.++..
T Consensus 198 TaStkGT--LIRIFdt~~g-~~l~E~RRG~d~A~iy~iaFSp-~~s~LavsSdKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 198 TASTKGT--LIRIFDTEDG-TLLQELRRGVDRADIYCIAFSP-NSSWLAVSSDKGTLHIFSLRDT 258 (346)
T ss_pred EeccCcE--EEEEEEcCCC-cEeeeeecCCchheEEEEEeCC-CccEEEEEcCCCeEEEEEeecC
Confidence 9999985 7999999886 55666643 235799999999 9999999999999999988653
No 230
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.50 E-value=3.6e-12 Score=126.37 Aligned_cols=202 Identities=20% Similarity=0.319 Sum_probs=145.3
Q ss_pred cCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEE
Q 046451 123 KGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWD 202 (719)
Q Consensus 123 ~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd 202 (719)
+..+..++|++ .-..++++..|-.|+|||-.. +.... ++. .....|+|++|-|.+...|++|+..| |.||.
T Consensus 98 ~~dlr~~aWhq-H~~~fava~nddvVriy~kss-t~pt~---Lks---~sQrnvtclawRPlsaselavgCr~g-IciW~ 168 (445)
T KOG2139|consen 98 EIDLRGVAWHQ-HIIAFAVATNDDVVRIYDKSS-TCPTK---LKS---VSQRNVTCLAWRPLSASELAVGCRAG-ICIWS 168 (445)
T ss_pred hcceeeEeech-hhhhhhhhccCcEEEEeccCC-CCCce---ecc---hhhcceeEEEeccCCcceeeeeecce-eEEEE
Confidence 44678899988 566788999999999999776 33322 222 23458999999999888899998866 88997
Q ss_pred CCCC----ce--------eEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEE
Q 046451 203 LKKQ----KP--------VISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAM 270 (719)
Q Consensus 203 ~~~~----~~--------~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v 270 (719)
.... +. ...+.......|+++.|++|| ..+++++.++. .|.|||..++.. +.......+++.-+
T Consensus 169 ~s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dg-t~l~tAS~gss--si~iWdpdtg~~-~pL~~~glgg~slL 244 (445)
T KOG2139|consen 169 DSRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDG-TILVTASFGSS--SIMIWDPDTGQK-IPLIPKGLGGFSLL 244 (445)
T ss_pred cCcccccccccccccccchhheeCCCCceeeEEEEcCCC-CEEeecccCcc--eEEEEcCCCCCc-ccccccCCCceeeE
Confidence 6531 11 112222334789999999998 57787777663 899999987633 22223345788899
Q ss_pred EeCCCCCCeEEEEeCCCcEEEEEC-CCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 271 SWCPNDSSYLLTCAKDNRTICWDT-VSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 271 ~~sp~d~~~l~sgs~Dg~I~iwd~-~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
.||| |+++|++++-|+..++|+. ++.....-..+ .+.|...+|+|+|..+|++++..-.|+-..+..
T Consensus 245 kwSP-dgd~lfaAt~davfrlw~e~q~wt~erw~lg-sgrvqtacWspcGsfLLf~~sgsp~lysl~f~~ 312 (445)
T KOG2139|consen 245 KWSP-DGDVLFAATCDAVFRLWQENQSWTKERWILG-SGRVQTACWSPCGSFLLFACSGSPRLYSLTFDG 312 (445)
T ss_pred EEcC-CCCEEEEecccceeeeehhcccceecceecc-CCceeeeeecCCCCEEEEEEcCCceEEEEeecC
Confidence 9999 9999999999999999954 34443333333 347999999999988888887655554444333
No 231
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.49 E-value=9.5e-12 Score=121.86 Aligned_cols=277 Identities=17% Similarity=0.285 Sum_probs=182.2
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
.+.|.-+.|+.|.-++.++-. .+..+.+|++...+-...+ ......+..++|||||. .+
T Consensus 48 ldki~yieW~ads~~ilC~~y---------k~~~vqvwsl~Qpew~ckI-----deg~agls~~~WSPdgr-------hi 106 (447)
T KOG4497|consen 48 LDKIVYIEWKADSCHILCVAY---------KDPKVQVWSLVQPEWYCKI-----DEGQAGLSSISWSPDGR-------HI 106 (447)
T ss_pred HHHhhheeeeccceeeeeeee---------ccceEEEEEeecceeEEEe-----ccCCCcceeeeECCCcc-------eE
Confidence 366778899999988776632 3345599999854332222 34567899999999985 67
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC---------------------
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD--------------------- 145 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d--------------------- 145 (719)
|.+...|-.|.||.+.+ +....+..-+..+..++|++ |+++.+.+++.
T Consensus 107 L~tseF~lriTVWSL~t----------~~~~~~~~pK~~~kg~~f~~-dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~ 175 (447)
T KOG4497|consen 107 LLTSEFDLRITVWSLNT----------QKGYLLPHPKTNVKGYAFHP-DGQFCAILSRRDCKDYVQISSCKAWILLKEFK 175 (447)
T ss_pred eeeecceeEEEEEEecc----------ceeEEecccccCceeEEECC-CCceeeeeecccHHHHHHHHhhHHHHHHHhcC
Confidence 88888999999999843 22333343445667888888 77777766532
Q ss_pred ---------------CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCcee-
Q 046451 146 ---------------GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPV- 209 (719)
Q Consensus 146 ---------------g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~- 209 (719)
..+.|||---...+..+ .-.-.+..++|+|.+ .+|++|+.|+.++|.+--+.+..
T Consensus 176 ~dT~DltgieWsPdg~~laVwd~~Leykv~aY--------e~~lG~k~v~wsP~~-qflavGsyD~~lrvlnh~tWk~f~ 246 (447)
T KOG4497|consen 176 LDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAY--------ERGLGLKFVEWSPCN-QFLAVGSYDQMLRVLNHFTWKPFG 246 (447)
T ss_pred CCcccccCceECCCCcEEEEecchhhheeeee--------eeccceeEEEecccc-ceEEeeccchhhhhhceeeeeehh
Confidence 12334432221111110 011368899999987 59999999999988653211110
Q ss_pred -----------------------------------------------------------EEecC-----CCCCceeEEEE
Q 046451 210 -----------------------------------------------------------ISFSE-----SIKRRCSVLQW 225 (719)
Q Consensus 210 -----------------------------------------------------------~~~~~-----~~~~~i~~l~~ 225 (719)
..+.. .....+..++|
T Consensus 247 eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~laf 326 (447)
T KOG4497|consen 247 EFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAF 326 (447)
T ss_pred hhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeee
Confidence 00000 12344667899
Q ss_pred CCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC
Q 046451 226 NPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA 305 (719)
Q Consensus 226 sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~ 305 (719)
++|. .++...+|+--..+.+||+++.+ +..+-.....|....|.| ....|+.+....++++|...-...+.. ..
T Consensus 327 s~Ds--~y~aTrnd~~PnalW~Wdlq~l~--l~avLiQk~piraf~WdP-~~prL~vctg~srLY~W~psg~~~V~v-P~ 400 (447)
T KOG4497|consen 327 SCDS--TYAATRNDKYPNALWLWDLQNLK--LHAVLIQKHPIRAFEWDP-GRPRLVVCTGKSRLYFWAPSGPRVVGV-PK 400 (447)
T ss_pred cCCc--eEEeeecCCCCceEEEEechhhh--hhhhhhhccceeEEEeCC-CCceEEEEcCCceEEEEcCCCceEEec-CC
Confidence 9995 35555555545589999998642 333334567899999999 777788887788899998855444444 33
Q ss_pred CCCCeEEeEEcCCCCCEEEEEeCCCc
Q 046451 306 GTNWNFDIHWYPKIPGVISASSFDGK 331 (719)
Q Consensus 306 h~~~v~~l~~spdg~~~las~s~Dg~ 331 (719)
..-.|.++.|+-+| ..++-++.|.-
T Consensus 401 ~GF~i~~l~W~~~g-~~i~l~~kDaf 425 (447)
T KOG4497|consen 401 KGFNIQKLQWLQPG-EFIVLCGKDAF 425 (447)
T ss_pred CCceeeeEEecCCC-cEEEEEcCCce
Confidence 33569999999999 67888887753
No 232
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.49 E-value=1.3e-12 Score=135.64 Aligned_cols=190 Identities=14% Similarity=0.183 Sum_probs=138.0
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC
Q 046451 135 TPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE 214 (719)
Q Consensus 135 ~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~ 214 (719)
++--|+.|-.-|.|.+.|....+..+.| .....-.+..|+|+.|-+.+..+++++-.+|.+++||... ..
T Consensus 184 ~g~dllIGf~tGqvq~idp~~~~~sklf---ne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~-------~~ 253 (636)
T KOG2394|consen 184 KGLDLLIGFTTGQVQLIDPINFEVSKLF---NEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEI-------VC 253 (636)
T ss_pred CCcceEEeeccCceEEecchhhHHHHhh---hhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccc-------cc
Confidence 3456777888899999988764333222 1212223468999999998888999999999999999721 10
Q ss_pred CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEEC
Q 046451 215 SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDT 294 (719)
Q Consensus 215 ~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~ 294 (719)
.... .+....+++.. |. |..|--.....++..+....+.|..++|++ |+++||+.+.||.+||||+
T Consensus 254 ~~t~--p~~~~~k~~~~-f~----------i~t~ksk~~rNPv~~w~~~~g~in~f~FS~-DG~~LA~VSqDGfLRvF~f 319 (636)
T KOG2394|consen 254 GATA--PSYQALKDGDQ-FA----------ILTSKSKKTRNPVARWHIGEGSINEFAFSP-DGKYLATVSQDGFLRIFDF 319 (636)
T ss_pred cCCC--CcccccCCCCe-eE----------EeeeeccccCCccceeEeccccccceeEcC-CCceEEEEecCceEEEeec
Confidence 1111 11122234322 22 222222222244555544556899999999 9999999999999999999
Q ss_pred CCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCC
Q 046451 295 VSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSN 349 (719)
Q Consensus 295 ~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~ 349 (719)
.+.+++..++.--+...|++||||| ++|++|++|..|.||.+..+++++.++..
T Consensus 320 dt~eLlg~mkSYFGGLLCvcWSPDG-KyIvtGGEDDLVtVwSf~erRVVARGqGH 373 (636)
T KOG2394|consen 320 DTQELLGVMKSYFGGLLCVCWSPDG-KYIVTGGEDDLVTVWSFEERRVVARGQGH 373 (636)
T ss_pred cHHHHHHHHHhhccceEEEEEcCCc-cEEEecCCcceEEEEEeccceEEEecccc
Confidence 9999998888888889999999999 89999999999999999999999876644
No 233
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.49 E-value=5.7e-12 Score=138.97 Aligned_cols=238 Identities=16% Similarity=0.140 Sum_probs=148.4
Q ss_pred ceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcC---CCcEEEEcCCccccCCCCCCCCc
Q 046451 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLV---DGSIDIWNPLSLISSGETGGNPL 115 (719)
Q Consensus 39 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~---dg~I~lwd~~~~~~~~~~~~~~~ 115 (719)
..|.+||.+.... ..+ ..+...+.+.+|++|+ +.|+..+. +..|++||+. .+ .
T Consensus 184 ~~l~i~D~~g~~~-~~l-----t~~~~~v~~p~wSpDg--------~~la~~s~~~~~~~l~~~dl~------~g---~- 239 (433)
T PRK04922 184 YALQVADSDGYNP-QTI-----LRSAEPILSPAWSPDG--------KKLAYVSFERGRSAIYVQDLA------TG---Q- 239 (433)
T ss_pred EEEEEECCCCCCc-eEe-----ecCCCccccccCCCCC--------CEEEEEecCCCCcEEEEEECC------CC---C-
Confidence 3567777753321 111 2356678999999998 56666653 3469999983 22 2
Q ss_pred eeeeccccCCEEEEEEeCCCCCEE-EEEeCCC--cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEE
Q 046451 116 IAHLSRHKGPVRGLEFNSFTPNLL-ASGADDG--EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILAST 192 (719)
Q Consensus 116 ~~~l~~h~~~V~~l~fsp~~~~~l-asgs~dg--~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~ 192 (719)
...+..+.+...+++|++ +++.| ++.+.+| .|++||+.+++... +. .+.......+|+++|..++++.
T Consensus 240 ~~~l~~~~g~~~~~~~Sp-DG~~l~~~~s~~g~~~Iy~~d~~~g~~~~----lt----~~~~~~~~~~~spDG~~l~f~s 310 (433)
T PRK04922 240 RELVASFRGINGAPSFSP-DGRRLALTLSRDGNPEIYVMDLGSRQLTR----LT----NHFGIDTEPTWAPDGKSIYFTS 310 (433)
T ss_pred EEEeccCCCCccCceECC-CCCEEEEEEeCCCCceEEEEECCCCCeEE----Cc----cCCCCccceEECCCCCEEEEEE
Confidence 223333445556889999 66655 4556665 59999998765322 11 1233456789999986444444
Q ss_pred eCCCc--EEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEE
Q 046451 193 SYNGT--TVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAM 270 (719)
Q Consensus 193 s~dg~--I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v 270 (719)
..+|. |+++|+.+++...... .......++|++||+.++++.. +++...|.+||+.++. ...+. +.......
T Consensus 311 d~~g~~~iy~~dl~~g~~~~lt~--~g~~~~~~~~SpDG~~Ia~~~~-~~~~~~I~v~d~~~g~--~~~Lt-~~~~~~~p 384 (433)
T PRK04922 311 DRGGRPQIYRVAASGGSAERLTF--QGNYNARASVSPDGKKIAMVHG-SGGQYRIAVMDLSTGS--VRTLT-PGSLDESP 384 (433)
T ss_pred CCCCCceEEEEECCCCCeEEeec--CCCCccCEEECCCCCEEEEEEC-CCCceeEEEEECCCCC--eEECC-CCCCCCCc
Confidence 45554 7777877665433222 2334557899999975545443 3323369999997653 23333 33345677
Q ss_pred EeCCCCCCeEEEEeCC---CcEEEEECCCCeEEEEecCCCCCeEEeEEcC
Q 046451 271 SWCPNDSSYLLTCAKD---NRTICWDTVSGEIVSELPAGTNWNFDIHWYP 317 (719)
Q Consensus 271 ~~sp~d~~~l~sgs~D---g~I~iwd~~~~~~~~~l~~h~~~v~~l~~sp 317 (719)
.|++ |+++|+..+.+ +.|.++|+. +.....+..+...+...+|+|
T Consensus 385 ~~sp-dG~~i~~~s~~~g~~~L~~~~~~-g~~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 385 SFAP-NGSMVLYATREGGRGVLAAVSTD-GRVRQRLVSADGEVREPAWSP 432 (433)
T ss_pred eECC-CCCEEEEEEecCCceEEEEEECC-CCceEEcccCCCCCCCCccCC
Confidence 9999 88877766643 457888884 555666666666678888886
No 234
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.48 E-value=9.9e-12 Score=129.97 Aligned_cols=281 Identities=12% Similarity=0.104 Sum_probs=192.4
Q ss_pred cceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccC-CEEEEEEe
Q 046451 54 DLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKG-PVRGLEFN 132 (719)
Q Consensus 54 ~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~-~V~~l~fs 132 (719)
.+.++..+++....+.|..++||. .+|++|..--.|++||+.. +-..+..|.+ .+..+...
T Consensus 41 rieLiQdfe~p~ast~ik~s~DGq-------Y~lAtG~YKP~ikvydlan-----------LSLKFERhlDae~V~feiL 102 (703)
T KOG2321|consen 41 RIELIQDFEMPTASTRIKVSPDGQ-------YLLATGTYKPQIKVYDLAN-----------LSLKFERHLDAEVVDFEIL 102 (703)
T ss_pred HHHHHHhcCCccccceeEecCCCc-------EEEEecccCCceEEEEccc-----------ceeeeeecccccceeEEEe
Confidence 344566778899999999999995 7888999999999999943 2233333432 33333333
Q ss_pred CCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEe
Q 046451 133 SFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF 212 (719)
Q Consensus 133 p~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~ 212 (719)
.+|-..++.-..|.+|.+..--.......+ ...-.+++++.-...++ +++....|+-++++.|+.+..|
T Consensus 103 sDD~SK~v~L~~DR~IefHak~G~hy~~RI----------P~~GRDm~y~~~scDly-~~gsg~evYRlNLEqGrfL~P~ 171 (703)
T KOG2321|consen 103 SDDYSKSVFLQNDRTIEFHAKYGRHYRTRI----------PKFGRDMKYHKPSCDLY-LVGSGSEVYRLNLEQGRFLNPF 171 (703)
T ss_pred ccchhhheEeecCceeeehhhcCeeeeeec----------CcCCccccccCCCccEE-EeecCcceEEEEcccccccccc
Confidence 335555666677777776543322111111 11234555554433344 4444557999999999999888
Q ss_pred cCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEee------CCCC-----CeeEEEeCCCCCCeEE
Q 046451 213 SESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFV------GHTK-----GVIAMSWCPNDSSYLL 281 (719)
Q Consensus 213 ~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~------~h~~-----~V~~v~~sp~d~~~l~ 281 (719)
. .....+++|..++.. .+|++|+.++ .|.+||.|+.. .+.++. .|.+ .|+++.|+. +|-.++
T Consensus 172 ~-~~~~~lN~v~in~~h-gLla~Gt~~g---~VEfwDpR~ks-rv~~l~~~~~v~s~pg~~~~~svTal~F~d-~gL~~a 244 (703)
T KOG2321|consen 172 E-TDSGELNVVSINEEH-GLLACGTEDG---VVEFWDPRDKS-RVGTLDAASSVNSHPGGDAAPSVTALKFRD-DGLHVA 244 (703)
T ss_pred c-cccccceeeeecCcc-ceEEecccCc---eEEEecchhhh-hheeeecccccCCCccccccCcceEEEecC-CceeEE
Confidence 8 566899999999986 5788888887 99999998753 333332 2333 499999997 799999
Q ss_pred EEeCCCcEEEEECCCCeEEEEecCC--CCCeEEeEEcCCCC-CEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCc
Q 046451 282 TCAKDNRTICWDTVSGEIVSELPAG--TNWNFDIHWYPKIP-GVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAP 358 (719)
Q Consensus 282 sgs~Dg~I~iwd~~~~~~~~~l~~h--~~~v~~l~~spdg~-~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p 358 (719)
+|+.+|.|.|||+++.+.+..- .| .-.|..+.|.+.+. ..|++.. ...++|||-.+++.....|....
T Consensus 245 VGts~G~v~iyDLRa~~pl~~k-dh~~e~pi~~l~~~~~~~q~~v~S~D-k~~~kiWd~~~Gk~~asiEpt~~------- 315 (703)
T KOG2321|consen 245 VGTSTGSVLIYDLRASKPLLVK-DHGYELPIKKLDWQDTDQQNKVVSMD-KRILKIWDECTGKPMASIEPTSD------- 315 (703)
T ss_pred eeccCCcEEEEEcccCCceeec-ccCCccceeeecccccCCCceEEecc-hHHhhhcccccCCceeeccccCC-------
Confidence 9999999999999998877653 34 34788999977632 3555554 67999999999999875554322
Q ss_pred ceecCCCceeeeeCCcEEEEccCCCC
Q 046451 359 KWYKRPAGASFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 359 ~w~~~~~~~s~s~~Gklv~~~~~~~~ 384 (719)
...+|+-+|+-++.+..++..
T Consensus 316 -----lND~C~~p~sGm~f~Ane~~~ 336 (703)
T KOG2321|consen 316 -----LNDFCFVPGSGMFFTANESSK 336 (703)
T ss_pred -----cCceeeecCCceEEEecCCCc
Confidence 123566677777666655543
No 235
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.46 E-value=4.8e-12 Score=122.87 Aligned_cols=157 Identities=18% Similarity=0.338 Sum_probs=111.7
Q ss_pred eEEEEecCCCCcEEEEEeC---------CCcEEEEECCC-CceeEEecCCCCCceeEEEECCCCCcEEEEEe-CCCCCCc
Q 046451 176 ISFVSWNSKVQHILASTSY---------NGTTVVWDLKK-QKPVISFSESIKRRCSVLQWNPDVATQLVVAS-DEDSSPA 244 (719)
Q Consensus 176 I~~l~~sp~g~~~l~s~s~---------dg~I~iwd~~~-~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s-~d~~~~~ 244 (719)
=..+.|+++|..+++.... -|...||.++. +..+..+.....+.|.+++|+|+|+.++++.+ .+. .
T Consensus 8 ~~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~---~ 84 (194)
T PF08662_consen 8 DAKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPA---K 84 (194)
T ss_pred eEEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCc---c
Confidence 3478899998766666552 13455555533 23344444234567999999999976655544 333 8
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCC---CcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCC
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD---NRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPG 321 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~D---g~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~ 321 (719)
|.+||++ .+.+..+ +...+..|.|+| +|++|++++.+ |.|.+||+++.+.+.++. |. .++.++|+||| +
T Consensus 85 v~lyd~~--~~~i~~~--~~~~~n~i~wsP-~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~~-~~t~~~WsPdG-r 156 (194)
T PF08662_consen 85 VTLYDVK--GKKIFSF--GTQPRNTISWSP-DGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-HS-DATDVEWSPDG-R 156 (194)
T ss_pred cEEEcCc--ccEeEee--cCCCceEEEECC-CCCEEEEEEccCCCcEEEEEECCCCEEeeccc-cC-cEEEEEEcCCC-C
Confidence 9999996 3445555 356778999999 99999998754 669999999999888764 33 37899999999 5
Q ss_pred EEEEEeC------CCcEEEEeCCCCccc
Q 046451 322 VISASSF------DGKIGIYNIEGCSRY 343 (719)
Q Consensus 322 ~las~s~------Dg~I~iwd~~~~~~~ 343 (719)
+|++++. |+.++||++.+..+.
T Consensus 157 ~~~ta~t~~r~~~dng~~Iw~~~G~~l~ 184 (194)
T PF08662_consen 157 YLATATTSPRLRVDNGFKIWSFQGRLLY 184 (194)
T ss_pred EEEEEEeccceeccccEEEEEecCeEeE
Confidence 6655543 889999999766553
No 236
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.44 E-value=1.6e-11 Score=135.05 Aligned_cols=208 Identities=15% Similarity=0.181 Sum_probs=128.4
Q ss_pred CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC-C--CcEEEEECCCCceeEEecCCCCCceeE
Q 046451 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY-N--GTTVVWDLKKQKPVISFSESIKRRCSV 222 (719)
Q Consensus 146 g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~-d--g~I~iwd~~~~~~~~~~~~~~~~~i~~ 222 (719)
..|.++|..... ...+ ..+...+.+.+|+|+|. .|+..+. + ..|++||+.+++..... .....+..
T Consensus 176 ~~L~~~D~dG~~-~~~l-------~~~~~~v~~p~wSPDG~-~la~~s~~~~~~~I~~~dl~~g~~~~l~--~~~g~~~~ 244 (427)
T PRK02889 176 YQLQISDADGQN-AQSA-------LSSPEPIISPAWSPDGT-KLAYVSFESKKPVVYVHDLATGRRRVVA--NFKGSNSA 244 (427)
T ss_pred cEEEEECCCCCC-ceEe-------ccCCCCcccceEcCCCC-EEEEEEccCCCcEEEEEECCCCCEEEee--cCCCCccc
Confidence 467777774332 2221 12445788999999985 5555443 3 35999999988754332 23455678
Q ss_pred EEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeC-CCcEEEEE--CCCCeE
Q 046451 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAK-DNRTICWD--TVSGEI 299 (719)
Q Consensus 223 l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~-Dg~I~iwd--~~~~~~ 299 (719)
.+|+|||+.++++.+.++ ...|+++|+.. ..+..+..+...+....|++ |++.|+..+. +|...||. +.+++.
T Consensus 245 ~~~SPDG~~la~~~~~~g-~~~Iy~~d~~~--~~~~~lt~~~~~~~~~~wSp-DG~~l~f~s~~~g~~~Iy~~~~~~g~~ 320 (427)
T PRK02889 245 PAWSPDGRTLAVALSRDG-NSQIYTVNADG--SGLRRLTQSSGIDTEPFFSP-DGRSIYFTSDRGGAPQIYRMPASGGAA 320 (427)
T ss_pred eEECCCCCEEEEEEccCC-CceEEEEECCC--CCcEECCCCCCCCcCeEEcC-CCCEEEEEecCCCCcEEEEEECCCCce
Confidence 999999976666666665 12344455543 33455655655667789999 8887775553 45666664 444443
Q ss_pred EEEecCCCCCeEEeEEcCCCCCEEEEEeCCC---cEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEE
Q 046451 300 VSELPAGTNWNFDIHWYPKIPGVISASSFDG---KIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLV 376 (719)
Q Consensus 300 ~~~l~~h~~~v~~l~~spdg~~~las~s~Dg---~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv 376 (719)
. .+..+........|+||| +.|+..+.++ .|.+||+.+++.....+.. + ....+|++||+.+
T Consensus 321 ~-~lt~~g~~~~~~~~SpDG-~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~~~----------~---~~~p~~spdg~~l 385 (427)
T PRK02889 321 Q-RVTFTGSYNTSPRISPDG-KLLAYISRVGGAFKLYVQDLATGQVTALTDTT----------R---DESPSFAPNGRYI 385 (427)
T ss_pred E-EEecCCCCcCceEECCCC-CEEEEEEccCCcEEEEEEECCCCCeEEccCCC----------C---ccCceECCCCCEE
Confidence 2 222222334568999999 5665555443 6999999887654432211 1 1235788888888
Q ss_pred EEccCCC
Q 046451 377 SFHPKSS 383 (719)
Q Consensus 377 ~~~~~~~ 383 (719)
+|..+..
T Consensus 386 ~~~~~~~ 392 (427)
T PRK02889 386 LYATQQG 392 (427)
T ss_pred EEEEecC
Confidence 8876644
No 237
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.44 E-value=3.9e-11 Score=132.53 Aligned_cols=238 Identities=14% Similarity=0.114 Sum_probs=147.8
Q ss_pred ceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcC---CCcEEEEcCCccccCCCCCCCCc
Q 046451 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLV---DGSIDIWNPLSLISSGETGGNPL 115 (719)
Q Consensus 39 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~---dg~I~lwd~~~~~~~~~~~~~~~ 115 (719)
..|.++|.+.... .. ...+...+.+.+|++|| +.|+..+. +..|++||+. ++ .
T Consensus 182 ~~l~~~d~dg~~~-~~-----lt~~~~~v~~p~wSpDG--------~~lay~s~~~g~~~i~~~dl~------~g----~ 237 (435)
T PRK05137 182 KRLAIMDQDGANV-RY-----LTDGSSLVLTPRFSPNR--------QEITYMSYANGRPRVYLLDLE------TG----Q 237 (435)
T ss_pred eEEEEECCCCCCc-EE-----EecCCCCeEeeEECCCC--------CEEEEEEecCCCCEEEEEECC------CC----c
Confidence 3556666653221 11 13466789999999998 56665543 4689999983 33 2
Q ss_pred eeeeccccCCEEEEEEeCCCCCEE-EEEeCCCc--EEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEE
Q 046451 116 IAHLSRHKGPVRGLEFNSFTPNLL-ASGADDGE--ICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILAST 192 (719)
Q Consensus 116 ~~~l~~h~~~V~~l~fsp~~~~~l-asgs~dg~--I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~ 192 (719)
...+..+.+.+...+|+| |++.| ++.+.++. |++||+.++.... +. .+........|+++|..++++.
T Consensus 238 ~~~l~~~~g~~~~~~~SP-DG~~la~~~~~~g~~~Iy~~d~~~~~~~~----Lt----~~~~~~~~~~~spDG~~i~f~s 308 (435)
T PRK05137 238 RELVGNFPGMTFAPRFSP-DGRKVVMSLSQGGNTDIYTMDLRSGTTTR----LT----DSPAIDTSPSYSPDGSQIVFES 308 (435)
T ss_pred EEEeecCCCcccCcEECC-CCCEEEEEEecCCCceEEEEECCCCceEE----cc----CCCCccCceeEcCCCCEEEEEE
Confidence 234455667778899999 66655 56666655 7777887765322 11 1333566789999986444444
Q ss_pred eCCC--cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEE
Q 046451 193 SYNG--TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAM 270 (719)
Q Consensus 193 s~dg--~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v 270 (719)
..+| .|++||+.+++.. .+. .....+....|+|||+.++++. .++....|.+||+.... .+.+. ....+..+
T Consensus 309 ~~~g~~~Iy~~d~~g~~~~-~lt-~~~~~~~~~~~SpdG~~ia~~~-~~~~~~~i~~~d~~~~~--~~~lt-~~~~~~~p 382 (435)
T PRK05137 309 DRSGSPQLYVMNADGSNPR-RIS-FGGGRYSTPVWSPRGDLIAFTK-QGGGQFSIGVMKPDGSG--ERILT-SGFLVEGP 382 (435)
T ss_pred CCCCCCeEEEEECCCCCeE-Eee-cCCCcccCeEECCCCCEEEEEE-cCCCceEEEEEECCCCc--eEecc-CCCCCCCC
Confidence 3444 6888898766543 333 2345567789999997554444 33323368889985432 23332 22356788
Q ss_pred EeCCCCCCeEEEEeCC------CcEEEEECCCCeEEEEecCCCCCeEEeEEcCC
Q 046451 271 SWCPNDSSYLLTCAKD------NRTICWDTVSGEIVSELPAGTNWNFDIHWYPK 318 (719)
Q Consensus 271 ~~sp~d~~~l~sgs~D------g~I~iwd~~~~~~~~~l~~h~~~v~~l~~spd 318 (719)
.|+| |+++|+..+.+ ..|.++|+..++. ..+.. ...+...+|+|-
T Consensus 383 ~~sp-DG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-~~l~~-~~~~~~p~Wsp~ 433 (435)
T PRK05137 383 TWAP-NGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-REVPT-PGDASDPAWSPL 433 (435)
T ss_pred eECC-CCCEEEEEEccCCCCCcceEEEEECCCCce-EEccC-CCCccCcccCCC
Confidence 9999 88877665432 2578888865544 44543 334677788763
No 238
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.44 E-value=5.4e-12 Score=140.78 Aligned_cols=206 Identities=15% Similarity=0.199 Sum_probs=156.2
Q ss_pred CCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEEC
Q 046451 124 GPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDL 203 (719)
Q Consensus 124 ~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~ 203 (719)
+.|....+.. +...++..+.+..+.|||.........+ ......--....-+-++.+ .-++++|+.-+.|.+|+.
T Consensus 88 ~wi~g~~l~~-e~k~i~l~~~~ns~~i~d~~~~~~~~~i---~~~er~~l~~~~~~g~s~~-~~~i~~gsv~~~iivW~~ 162 (967)
T KOG0974|consen 88 DWIFGAKLFE-ENKKIALVTSRNSLLIRDSKNSSVLSKI---QSDERCTLYSSLIIGDSAE-ELYIASGSVFGEIIVWKP 162 (967)
T ss_pred ccccccchhh-hcceEEEEEcCceEEEEecccCceehhc---CCCceEEEEeEEEEeccCc-EEEEEeccccccEEEEec
Confidence 3444444444 5678888888999999999877655442 1100000001111222333 357888999999999999
Q ss_pred CCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEE
Q 046451 204 KKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283 (719)
Q Consensus 204 ~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sg 283 (719)
...+.-..+. +|.+.|..+.|+-|| .++++.++|. ++++|++.+........-+|+..|..++|.+ + .++++
T Consensus 163 ~~dn~p~~l~-GHeG~iF~i~~s~dg-~~i~s~SdDR---siRlW~i~s~~~~~~~~fgHsaRvw~~~~~~-n--~i~t~ 234 (967)
T KOG0974|consen 163 HEDNKPIRLK-GHEGSIFSIVTSLDG-RYIASVSDDR---SIRLWPIDSREVLGCTGFGHSARVWACCFLP-N--RIITV 234 (967)
T ss_pred cccCCcceec-ccCCceEEEEEccCC-cEEEEEecCc---ceeeeecccccccCcccccccceeEEEEecc-c--eeEEe
Confidence 8444333455 899999999999998 5899999998 9999999987655557778999999999998 4 99999
Q ss_pred eCCCcEEEEECCCCeEEEEecCCCC-CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 284 AKDNRTICWDTVSGEIVSELPAGTN-WNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 284 s~Dg~I~iwd~~~~~~~~~l~~h~~-~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+.|.+.++|+. .++.+.+++.|.. .|+.+....+. .+++|++.|+.+++|++.+.....
T Consensus 235 gedctcrvW~~-~~~~l~~y~~h~g~~iw~~~~~~~~-~~~vT~g~Ds~lk~~~l~~r~~e~ 294 (967)
T KOG0974|consen 235 GEDCTCRVWGV-NGTQLEVYDEHSGKGIWKIAVPIGV-IIKVTGGNDSTLKLWDLNGRGLEG 294 (967)
T ss_pred ccceEEEEEec-ccceehhhhhhhhcceeEEEEcCCc-eEEEeeccCcchhhhhhhcccccc
Confidence 99999999976 5666778888754 68999999887 799999999999999998876655
No 239
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.43 E-value=1.8e-12 Score=123.50 Aligned_cols=249 Identities=14% Similarity=0.170 Sum_probs=162.4
Q ss_pred CCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec-cccCCEEEEEEeCCCCCEEE
Q 046451 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS-RHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~fsp~~~~~la 140 (719)
.|...|+++.|-.++ +|.+|...|.|++|++.+ . .....++ .|...|+.+.-.+ + +.|.
T Consensus 12 p~~~~v~s~~fqa~~---------rL~sg~~~G~V~~w~lqt------~---r~~~~~r~~g~~~it~lq~~p-~-d~l~ 71 (323)
T KOG0322|consen 12 PHSSSVTSVLFQANE---------RLMSGLSVGIVKMWVLQT------E---RDLPLIRLFGRLFITNLQSIP-N-DSLD 71 (323)
T ss_pred cccchheehhhccch---------hhhcccccceEEEEEeec------C---ccchhhhhhccceeeceeecC-C-cchh
Confidence 688899999998874 799999999999999943 3 4444555 4677888888877 3 7788
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCC-----CC---cEEEEEeCCC-cEEEEECCCCceeEE
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK-----VQ---HILASTSYNG-TTVVWDLKKQKPVIS 211 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~-----g~---~~l~s~s~dg-~I~iwd~~~~~~~~~ 211 (719)
+-+.|+.+.+|++.....+.. |.-.++++.|++. ++ .+++.-++.. .+++-|......+..
T Consensus 72 tqgRd~~L~lw~ia~s~~i~i----------~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i 141 (323)
T KOG0322|consen 72 TQGRDPLLILWTIAYSAFISI----------HSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQI 141 (323)
T ss_pred hcCCCceEEEEEccCcceEEE----------eeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEc
Confidence 999999999999987543321 2223444444432 11 1111111110 122222222222222
Q ss_pred ecC---CCCCceeEEEECC-CCCcEEEEEeCCCCCCcEEEEecCCCCC---------ceEEeeCCCCCeeEEEeCCCCCC
Q 046451 212 FSE---SIKRRCSVLQWNP-DVATQLVVASDEDSSPALRLWDMRNTMS---------PVKEFVGHTKGVIAMSWCPNDSS 278 (719)
Q Consensus 212 ~~~---~~~~~i~~l~~sp-~g~~~l~~~s~d~~~~~I~lwDl~~~~~---------~~~~~~~h~~~V~~v~~sp~d~~ 278 (719)
... ...+.+.+..|.. ++.++++.++.+. |.+.+||+..+.+ .+.....|...|.++.|.+ -.+
T Consensus 142 ~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEs--ghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas-~~~ 218 (323)
T KOG0322|consen 142 ADDSERSKLGSVMCQDKDHACGSTFLLLAGYES--GHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYAS-SCD 218 (323)
T ss_pred cCchhccccCceeeeeccccccceEEEEEeccC--CeEEEEEccCCceeeccccccccccchhhccCcceeeeech-hhc
Confidence 221 3445666766543 3445555555443 3899999987522 2223446889999999987 555
Q ss_pred eEEEEeCCCcEEEEECCCC--e--EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 279 YLLTCAKDNRTICWDTVSG--E--IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 279 ~l~sgs~Dg~I~iwd~~~~--~--~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
.=++|+.+..+..|.++.. . ...++.-.+-.|..+.+-+|+ +++||+++|++|+||+.++....+
T Consensus 219 rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~-KIlATAGWD~RiRVyswrtl~pLA 287 (323)
T KOG0322|consen 219 RGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDG-KILATAGWDHRIRVYSWRTLNPLA 287 (323)
T ss_pred CCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCC-cEEeecccCCcEEEEEeccCCchh
Confidence 5677888888999987632 2 222233334458899999999 899999999999999999988876
No 240
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.43 E-value=1.7e-10 Score=123.17 Aligned_cols=288 Identities=14% Similarity=0.189 Sum_probs=180.3
Q ss_pred CCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcC----CCcEEEEcCCccccCCCCCC
Q 046451 37 SSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLV----DGSIDIWNPLSLISSGETGG 112 (719)
Q Consensus 37 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~----dg~I~lwd~~~~~~~~~~~~ 112 (719)
..+.|.+|+++.... .+..............|++++++ ++|.+... +|.|..|++... ++ .
T Consensus 11 ~~~gI~~~~~d~~~g--~l~~~~~~~~~~~Ps~l~~~~~~--------~~LY~~~e~~~~~g~v~~~~i~~~----~g-~ 75 (345)
T PF10282_consen 11 KGGGIYVFRFDEETG--TLTLVQTVAEGENPSWLAVSPDG--------RRLYVVNEGSGDSGGVSSYRIDPD----TG-T 75 (345)
T ss_dssp SSTEEEEEEEETTTT--EEEEEEEEEESSSECCEEE-TTS--------SEEEEEETTSSTTTEEEEEEEETT----TT-E
T ss_pred CCCcEEEEEEcCCCC--CceEeeeecCCCCCceEEEEeCC--------CEEEEEEccccCCCCEEEEEECCC----cc-e
Confidence 345678888854433 34334444456667789999987 57776655 578999998431 11 1
Q ss_pred CCceeeeccccCCEEEEEEeCCCCCEEEEEe-CCCcEEEEcCCCCCCCCccCC-cc--C----CCCCCCCCeEEEEecCC
Q 046451 113 NPLIAHLSRHKGPVRGLEFNSFTPNLLASGA-DDGEICIWDLSAPAEPSHFPP-LR--G----NGSAAQGEISFVSWNSK 184 (719)
Q Consensus 113 ~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs-~dg~I~iwdl~~~~~~~~~~~-l~--~----~~~~h~~~I~~l~~sp~ 184 (719)
...+............+++++ ++++|+++. .+|.|.++++.....+..... +. + ..........++.|+|+
T Consensus 76 L~~~~~~~~~g~~p~~i~~~~-~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pd 154 (345)
T PF10282_consen 76 LTLLNSVPSGGSSPCHIAVDP-DGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPD 154 (345)
T ss_dssp EEEEEEEEESSSCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TT
T ss_pred eEEeeeeccCCCCcEEEEEec-CCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCC
Confidence 123333332344567899999 677776665 589999999987533222100 10 0 00112346789999999
Q ss_pred CCcEEEEEeCCCcEEEEECCCCc--e--eEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCce---
Q 046451 185 VQHILASTSYNGTTVVWDLKKQK--P--VISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPV--- 257 (719)
Q Consensus 185 g~~~l~s~s~dg~I~iwd~~~~~--~--~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~--- 257 (719)
++.++++.-....|++|++.... . ...+.......-+.+.|+++++.++++...++ .|.+|++......+
T Consensus 155 g~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~---~v~v~~~~~~~g~~~~~ 231 (345)
T PF10282_consen 155 GRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSN---TVSVFDYDPSDGSLTEI 231 (345)
T ss_dssp SSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTT---EEEEEEEETTTTEEEEE
T ss_pred CCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCC---cEEEEeecccCCceeEE
Confidence 86555555556789999998765 2 22333346677899999999976666666555 89999987322212
Q ss_pred EEeeC------CCCCeeEEEeCCCCCCeEEEEe-CCCcEEEEECC--CC--eEEEEecCCCCCeEEeEEcCCCCCEEEEE
Q 046451 258 KEFVG------HTKGVIAMSWCPNDSSYLLTCA-KDNRTICWDTV--SG--EIVSELPAGTNWNFDIHWYPKIPGVISAS 326 (719)
Q Consensus 258 ~~~~~------h~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~--~~--~~~~~l~~h~~~v~~l~~spdg~~~las~ 326 (719)
..+.. .......|+++| |+++|+++. .++.|.+|++. ++ +.+..+.........+.++++|..+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~i~isp-dg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~ 310 (345)
T PF10282_consen 232 QTISTLPEGFTGENAPAEIAISP-DGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVAN 310 (345)
T ss_dssp EEEESCETTSCSSSSEEEEEE-T-TSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEE
T ss_pred EEeeeccccccccCCceeEEEec-CCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEe
Confidence 12211 112577899999 888777665 56789999983 33 34455555556689999999995555555
Q ss_pred eCCCcEEEEeCC--CCcccc
Q 046451 327 SFDGKIGIYNIE--GCSRYG 344 (719)
Q Consensus 327 s~Dg~I~iwd~~--~~~~~~ 344 (719)
..++.|.+|+++ ++.+..
T Consensus 311 ~~s~~v~vf~~d~~tG~l~~ 330 (345)
T PF10282_consen 311 QDSNTVSVFDIDPDTGKLTP 330 (345)
T ss_dssp TTTTEEEEEEEETTTTEEEE
T ss_pred cCCCeEEEEEEeCCCCcEEE
Confidence 677899999874 555543
No 241
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.42 E-value=5e-12 Score=124.58 Aligned_cols=262 Identities=15% Similarity=0.259 Sum_probs=180.6
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecccc------------CCEEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHK------------GPVRGLE 130 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~------------~~V~~l~ 130 (719)
..+.|.++.|...| .+|++|..+|.|.++.-+.... + .......+..|. ..|..+.
T Consensus 24 eadiis~vef~~~G--------e~LatGdkgGRVv~f~r~~~~~---~-ey~~~t~fqshepEFDYLkSleieEKinkIr 91 (433)
T KOG1354|consen 24 EADIISAVEFDHYG--------ERLATGDKGGRVVLFEREKLYK---G-EYNFQTEFQSHEPEFDYLKSLEIEEKINKIR 91 (433)
T ss_pred hhcceeeEEeeccc--------ceEeecCCCCeEEEeecccccc---c-ceeeeeeeeccCcccchhhhhhhhhhhhhce
Confidence 45678899999999 7999999999999998643221 1 112333343443 4678889
Q ss_pred EeCCC-CCEEEEEeCCCcEEEEcCCCCCCCC------------c-----c------------CCccCCCCCCCCCeEEEE
Q 046451 131 FNSFT-PNLLASGADDGEICIWDLSAPAEPS------------H-----F------------PPLRGNGSAAQGEISFVS 180 (719)
Q Consensus 131 fsp~~-~~~lasgs~dg~I~iwdl~~~~~~~------------~-----~------------~~l~~~~~~h~~~I~~l~ 180 (719)
|.... ...++..+.|.+|++|.+....... . + .+.+.....|.-.|++|.
T Consensus 92 w~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS 171 (433)
T KOG1354|consen 92 WLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSIS 171 (433)
T ss_pred ecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeee
Confidence 98732 3467788899999999886543222 0 0 011122345777899999
Q ss_pred ecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-------CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCC
Q 046451 181 WNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-------SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNT 253 (719)
Q Consensus 181 ~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-------~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~ 253 (719)
++.|.+ .++ ...|-+|.+|+++--.....+-+ .....|++..|+|..-.+|+.++..| +|+|.|+|..
T Consensus 172 ~NsD~E-t~l-SADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKG---tIrLcDmR~~ 246 (433)
T KOG1354|consen 172 VNSDKE-TFL-SADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKG---TIRLCDMRQS 246 (433)
T ss_pred ecCccc-eEe-eccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCC---cEEEeechhh
Confidence 999975 444 45678899999875433222221 23456888999999878888888887 9999999843
Q ss_pred CCc-----eE----------EeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC-CCeEEEEecCCC----------
Q 046451 254 MSP-----VK----------EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV-SGEIVSELPAGT---------- 307 (719)
Q Consensus 254 ~~~-----~~----------~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~-~~~~~~~l~~h~---------- 307 (719)
..+ +. .+.+--..|.++.|+. +|+++++-+. -+|+|||+. ..+.+.++..|.
T Consensus 247 aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~-sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lY 324 (433)
T KOG1354|consen 247 ALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSH-SGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLY 324 (433)
T ss_pred hhhcchhhhhccccCCcchhhHHHHhhhhhceEEcc-CCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHh
Confidence 211 11 1112234688999998 8899886543 689999994 556666665542
Q ss_pred --CCe---EEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 308 --NWN---FDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 308 --~~v---~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+.| +.++|+.++ ..++||+....+++|++..+....
T Consensus 325 EnD~IfdKFec~~sg~~-~~v~TGsy~n~frvf~~~~gsk~d 365 (433)
T KOG1354|consen 325 ENDAIFDKFECSWSGND-SYVMTGSYNNVFRVFNLARGSKED 365 (433)
T ss_pred hccchhheeEEEEcCCc-ceEecccccceEEEecCCCCccee
Confidence 223 568999998 799999999999999977765543
No 242
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.40 E-value=2e-12 Score=138.22 Aligned_cols=300 Identities=18% Similarity=0.294 Sum_probs=207.5
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
|+-.+.+.++..+|.|+-+|+++.-|. .+.|++..-....+. . .-..-.|-++.|++....
T Consensus 21 l~v~~~~~a~si~p~grdi~lAsr~gl-----------~i~dld~p~~ppr~l--~-h~tpw~vad~qws~h~a~----- 81 (1081)
T KOG0309|consen 21 LKVDGGFNAVSINPSGRDIVLASRQGL-----------YIIDLDDPFTPPRWL--H-HITPWQVADVQWSPHPAK----- 81 (1081)
T ss_pred EEecCcccceeeccccchhhhhhhcCe-----------EEEeccCCCCCceee--e-ccCcchhcceecccCCCC-----
Confidence 455677889999999999999987775 456666443333221 1 123456778899987642
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
.+-++......-.+|++.. .........+.+|...|+++.|++.....|++++.|-.+..||++........
T Consensus 82 -~~wiVsts~qkaiiwnlA~------ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys- 153 (1081)
T KOG0309|consen 82 -PYWIVSTSNQKAIIWNLAK------SSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYS- 153 (1081)
T ss_pred -ceeEEecCcchhhhhhhhc------CCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceee-
Confidence 3444444566678899843 22336667888999999999999988999999999999999999986643221
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc-eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK-PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSS 242 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~-~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~ 242 (719)
. ..-......+.|+-...+.++ .+....|++||++.+. ++..+. +|...|+.++|+..-...+.+++.|+
T Consensus 154 -~----~~w~s~asqVkwnyk~p~vla-sshg~~i~vwd~r~gs~pl~s~K-~~vs~vn~~~fnr~~~s~~~s~~~d~-- 224 (1081)
T KOG0309|consen 154 -T----SSWRSAASQVKWNYKDPNVLA-SSHGNDIFVWDLRKGSTPLCSLK-GHVSSVNSIDFNRFKYSEIMSSSNDG-- 224 (1081)
T ss_pred -e----ecccccCceeeecccCcchhh-hccCCceEEEeccCCCcceEEec-ccceeeehHHHhhhhhhhhcccCCCC--
Confidence 1 112335678999988765555 4556789999999864 566666 68899999999887667788999998
Q ss_pred CcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCC----------CeEEEEeCCCcEEEEECCC-CeEEEEecCCCCCeE
Q 046451 243 PALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDS----------SYLLTCAKDNRTICWDTVS-GEIVSELPAGTNWNF 311 (719)
Q Consensus 243 ~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~----------~~l~sgs~Dg~I~iwd~~~-~~~~~~l~~h~~~v~ 311 (719)
+|++||..+..+.-.........|..-+|-|-+. +.+..--.++....|+..+ .+.+++|.+|.+.|.
T Consensus 225 -tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~ 303 (1081)
T KOG0309|consen 225 -TVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVL 303 (1081)
T ss_pred -ceeeecccccccccceeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHH
Confidence 9999998765433333333344555555555222 2211122223333344333 357899999999888
Q ss_pred EeEEcCCC---------CCEEEEEeCCCcEEEEeCCCC
Q 046451 312 DIHWYPKI---------PGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 312 ~l~~spdg---------~~~las~s~Dg~I~iwd~~~~ 340 (719)
.+.|-..+ ...|+|-+.|..+++|-+.+.
T Consensus 304 eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~~ 341 (1081)
T KOG0309|consen 304 EFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDSQ 341 (1081)
T ss_pred HHhhhhcccccCCCCccceeEEEeecCCceEeeeccHH
Confidence 87775433 247999999999999999864
No 243
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.40 E-value=2.9e-11 Score=117.42 Aligned_cols=162 Identities=23% Similarity=0.457 Sum_probs=109.1
Q ss_pred EEEEEeCCCCCEEEEEeC----------CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEE-EeCC
Q 046451 127 RGLEFNSFTPNLLASGAD----------DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILAS-TSYN 195 (719)
Q Consensus 127 ~~l~fsp~~~~~lasgs~----------dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s-~s~d 195 (719)
..+.|++ +|++|+.-.. -+...||.++........ +.. ...+.|.+++|+|+|..++++ |..+
T Consensus 9 ~~~~W~~-~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~--i~l---~~~~~I~~~~WsP~g~~favi~g~~~ 82 (194)
T PF08662_consen 9 AKLHWQP-SGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVES--IEL---KKEGPIHDVAWSPNGNEFAVIYGSMP 82 (194)
T ss_pred EEEEecc-cCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccce--eec---cCCCceEEEEECcCCCEEEEEEccCC
Confidence 4677887 5555544322 134556666443322111 111 123469999999998654433 4457
Q ss_pred CcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCC
Q 046451 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPN 275 (719)
Q Consensus 196 g~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~ 275 (719)
+.|.+||++ ++.+..+. ...+..|.|+|+|+ ++++++.++..|.|.+||+++. +.+.++. ...++.++|+|
T Consensus 83 ~~v~lyd~~-~~~i~~~~---~~~~n~i~wsP~G~-~l~~~g~~n~~G~l~~wd~~~~-~~i~~~~--~~~~t~~~WsP- 153 (194)
T PF08662_consen 83 AKVTLYDVK-GKKIFSFG---TQPRNTISWSPDGR-FLVLAGFGNLNGDLEFWDVRKK-KKISTFE--HSDATDVEWSP- 153 (194)
T ss_pred cccEEEcCc-ccEeEeec---CCCceEEEECCCCC-EEEEEEccCCCcEEEEEECCCC-EEeeccc--cCcEEEEEEcC-
Confidence 899999997 66666664 46678899999995 6666665554468999999853 4444433 34578999999
Q ss_pred CCCeEEEEeC------CCcEEEEECCCCeEEEEec
Q 046451 276 DSSYLLTCAK------DNRTICWDTVSGEIVSELP 304 (719)
Q Consensus 276 d~~~l~sgs~------Dg~I~iwd~~~~~~~~~l~ 304 (719)
||++|++++. |+.++||++ +|+.+.+..
T Consensus 154 dGr~~~ta~t~~r~~~dng~~Iw~~-~G~~l~~~~ 187 (194)
T PF08662_consen 154 DGRYLATATTSPRLRVDNGFKIWSF-QGRLLYKKP 187 (194)
T ss_pred CCCEEEEEEeccceeccccEEEEEe-cCeEeEecc
Confidence 9999998874 789999998 677776643
No 244
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.39 E-value=1.5e-10 Score=127.84 Aligned_cols=209 Identities=15% Similarity=0.197 Sum_probs=131.2
Q ss_pred eeeccccCCEEEEEEeCCCCCEEEEEeC-CC--cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe
Q 046451 117 AHLSRHKGPVRGLEFNSFTPNLLASGAD-DG--EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS 193 (719)
Q Consensus 117 ~~l~~h~~~V~~l~fsp~~~~~lasgs~-dg--~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s 193 (719)
..+..+...+.+..|+| |++.|+..+. ++ .|++||+.+++... +..+ .+......|+++|..++++.+
T Consensus 211 ~~l~~~~~~~~~p~wSP-DG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~-------~g~~~~~~wSPDG~~La~~~~ 281 (448)
T PRK04792 211 QMLLRSPEPLMSPAWSP-DGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSF-------PGINGAPRFSPDGKKLALVLS 281 (448)
T ss_pred eEeecCCCcccCceECC-CCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCC-------CCCcCCeeECCCCCEEEEEEe
Confidence 44555677889999999 7777776543 33 58899998765321 1111 123346899999876666677
Q ss_pred CCCc--EEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEE
Q 046451 194 YNGT--TVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMS 271 (719)
Q Consensus 194 ~dg~--I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~ 271 (719)
.+|. |++||+.+++.. .+. .+.......+|++||+.++++...++ ...|+++|+.++. ...+..+.......+
T Consensus 282 ~~g~~~Iy~~dl~tg~~~-~lt-~~~~~~~~p~wSpDG~~I~f~s~~~g-~~~Iy~~dl~~g~--~~~Lt~~g~~~~~~~ 356 (448)
T PRK04792 282 KDGQPEIYVVDIATKALT-RIT-RHRAIDTEPSWHPDGKSLIFTSERGG-KPQIYRVNLASGK--VSRLTFEGEQNLGGS 356 (448)
T ss_pred CCCCeEEEEEECCCCCeE-ECc-cCCCCccceEECCCCCEEEEEECCCC-CceEEEEECCCCC--EEEEecCCCCCcCee
Confidence 7775 888898877643 333 24455677899999976555544333 3467888886543 233322223345678
Q ss_pred eCCCCCCeEEEEeC-CC--cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCc--EEEEeCCCCcc
Q 046451 272 WCPNDSSYLLTCAK-DN--RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGK--IGIYNIEGCSR 342 (719)
Q Consensus 272 ~sp~d~~~l~sgs~-Dg--~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~--I~iwd~~~~~~ 342 (719)
|+| |+++|+..+. ++ .|.++|+.+++... +... .......|+|||..++++...++. |.++++++...
T Consensus 357 ~Sp-DG~~l~~~~~~~g~~~I~~~dl~~g~~~~-lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~G~~~ 429 (448)
T PRK04792 357 ITP-DGRSMIMVNRTNGKFNIARQDLETGAMQV-LTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSIDGRFK 429 (448)
T ss_pred ECC-CCCEEEEEEecCCceEEEEEECCCCCeEE-ccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEECCCCce
Confidence 999 7777776654 34 45567887776533 3322 123356899999666666665554 67777755433
No 245
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.39 E-value=1.5e-11 Score=119.20 Aligned_cols=233 Identities=17% Similarity=0.248 Sum_probs=161.4
Q ss_pred CceEEEEEeeccCCcccceeecccCCCC-CceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCce
Q 046451 38 SANLEIFKLDFQSEDRDLLLVGESPSSE-RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLI 116 (719)
Q Consensus 38 ~~~i~iwd~~~~~~~~~~~~~~~~~~~~-~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~ 116 (719)
.+.|.++..+.......+.-+....... ...++.|+..+ .-++++..+|.+.+-+... . ..+..
T Consensus 94 ~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~--------~~i~vs~s~G~~~~v~~t~------~-~le~v 158 (339)
T KOG0280|consen 94 RGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSG--------TKIFVSDSRGSISGVYETE------M-VLEKV 158 (339)
T ss_pred cceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccC--------ceEEEEcCCCcEEEEecce------e-eeeec
Confidence 4455777776554443332222222222 24577888877 5688999999999665422 1 11344
Q ss_pred eeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC
Q 046451 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG 196 (719)
Q Consensus 117 ~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg 196 (719)
...+.|.-.++...|+..+.+++.+|+.|+.+..||++..+.. +..+...|...|.+|.-++....+|++|+.|.
T Consensus 159 q~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~-----i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe 233 (339)
T KOG0280|consen 159 QTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTF-----IWHNSKVHTSGVVSIYSSPPKPTYIATGSYDE 233 (339)
T ss_pred ccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcce-----eeecceeeecceEEEecCCCCCceEEEecccc
Confidence 5788899999999999888899999999999999999944321 22334568889999999988788999999999
Q ss_pred cEEEEECCC-CceeEEecCCCCCceeEEEECCCCCc-EEEEEeCCCCCCcEEEEecCCCCCc----eEEeeCCCCCeeEE
Q 046451 197 TTVVWDLKK-QKPVISFSESIKRRCSVLQWNPDVAT-QLVVASDEDSSPALRLWDMRNTMSP----VKEFVGHTKGVIAM 270 (719)
Q Consensus 197 ~I~iwd~~~-~~~~~~~~~~~~~~i~~l~~sp~g~~-~l~~~s~d~~~~~I~lwDl~~~~~~----~~~~~~h~~~V~~v 270 (719)
.|++||.|+ ++++..-. ..+.|..+.++|.-.. +|+++-.+| .+|.+..+.... ....+.|.+-+..-
T Consensus 234 ~i~~~DtRnm~kPl~~~~--v~GGVWRi~~~p~~~~~lL~~CMh~G----~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~ 307 (339)
T KOG0280|consen 234 CIRVLDTRNMGKPLFKAK--VGGGVWRIKHHPEIFHRLLAACMHNG----AKILDSSDKVLEFQIVLPSDKIHDSLCYGG 307 (339)
T ss_pred ceeeeehhcccCccccCc--cccceEEEEecchhhhHHHHHHHhcC----ceEEEecccccchheeeeccccccceeecc
Confidence 999999995 66666554 6689999999997543 344555554 777777654332 33456677777777
Q ss_pred EeCCCCCCeEEEEe-CCCcEE-EEECCCC
Q 046451 271 SWCPNDSSYLLTCA-KDNRTI-CWDTVSG 297 (719)
Q Consensus 271 ~~sp~d~~~l~sgs-~Dg~I~-iwd~~~~ 297 (719)
.|.. ...+|+||+ .|+.++ +|---++
T Consensus 308 DWd~-~~~~lATCsFYDk~~~~~Wl~~t~ 335 (339)
T KOG0280|consen 308 DWDS-KDSFLATCSFYDKKIRQLWLHITG 335 (339)
T ss_pred cccc-ccceeeeeeccccceeeeeeeccC
Confidence 7755 446788876 566644 6644333
No 246
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.37 E-value=1.3e-10 Score=127.97 Aligned_cols=220 Identities=16% Similarity=0.199 Sum_probs=142.9
Q ss_pred cEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC---CcEEEEcCCCCCCCCccCCccCCCCC
Q 046451 95 SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD---GEICIWDLSAPAEPSHFPPLRGNGSA 171 (719)
Q Consensus 95 ~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d---g~I~iwdl~~~~~~~~~~~l~~~~~~ 171 (719)
.|.++|.. + .....+..+...+...+|++ ++++|+.++.+ ..|++||+.+++.... . .
T Consensus 171 ~l~~~d~~-------g---~~~~~l~~~~~~~~~p~~Sp-dg~~la~~~~~~~~~~i~v~d~~~g~~~~~----~----~ 231 (417)
T TIGR02800 171 ELQVADYD-------G---ANPQTITRSREPILSPAWSP-DGQKLAYVSFESGKPEIYVQDLATGQREKV----A----S 231 (417)
T ss_pred eEEEEcCC-------C---CCCEEeecCCCceecccCCC-CCCEEEEEEcCCCCcEEEEEECCCCCEEEe----e----c
Confidence 57777762 2 33455556677789999999 78888777644 4799999987653211 1 1
Q ss_pred CCCCeEEEEecCCCCcEEEEEeCCC--cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEe
Q 046451 172 AQGEISFVSWNSKVQHILASTSYNG--TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWD 249 (719)
Q Consensus 172 h~~~I~~l~~sp~g~~~l~s~s~dg--~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwD 249 (719)
+.+.+.+++|+++|..++++.+.++ .|++||+.+++.. .+. .+........|++||+.++++ +..+....|+++|
T Consensus 232 ~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~-~l~-~~~~~~~~~~~s~dg~~l~~~-s~~~g~~~iy~~d 308 (417)
T TIGR02800 232 FPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLT-RLT-NGPGIDTEPSWSPDGKSIAFT-SDRGGSPQIYMMD 308 (417)
T ss_pred CCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEE-ECC-CCCCCCCCEEECCCCCEEEEE-ECCCCCceEEEEE
Confidence 2335667899999865656665554 5889999876543 333 234445577999999654444 4433334688888
Q ss_pred cCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCC---cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEE
Q 046451 250 MRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDN---RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISAS 326 (719)
Q Consensus 250 l~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg---~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~ 326 (719)
+.+.. ...+..+...+..+.|++ ++++|+.++.++ .|.+||+.++... .+... .......|++|+..++++.
T Consensus 309 ~~~~~--~~~l~~~~~~~~~~~~sp-dg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~-~~~~~p~~spdg~~l~~~~ 383 (417)
T TIGR02800 309 ADGGE--VRRLTFRGGYNASPSWSP-DGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDT-GLDESPSFAPNGRMILYAT 383 (417)
T ss_pred CCCCC--EEEeecCCCCccCeEECC-CCCEEEEEEccCCceEEEEEeCCCCCeE-EccCC-CCCCCceECCCCCEEEEEE
Confidence 86542 344554556778889999 888888887776 7899999876543 23322 2245678999995455544
Q ss_pred eCCC--cEEEEeCCCCc
Q 046451 327 SFDG--KIGIYNIEGCS 341 (719)
Q Consensus 327 s~Dg--~I~iwd~~~~~ 341 (719)
..++ .+.+.+.....
T Consensus 384 ~~~~~~~l~~~~~~g~~ 400 (417)
T TIGR02800 384 TRGGRGVLGLVSTDGRF 400 (417)
T ss_pred eCCCcEEEEEEECCCce
Confidence 4443 45666655433
No 247
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.37 E-value=6.6e-11 Score=126.37 Aligned_cols=277 Identities=12% Similarity=0.129 Sum_probs=162.5
Q ss_pred CCceEEEEEeeccCCcccceeecccCCCCCc-eeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCc
Q 046451 37 SSANLEIFKLDFQSEDRDLLLVGESPSSERF-NRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPL 115 (719)
Q Consensus 37 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V-~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~ 115 (719)
.++.+.|.|..+.+...++ .....+ ..+.|++|+ +++++++.||.|.++|+ .+. +.
T Consensus 14 ~~~~v~viD~~t~~~~~~i------~~~~~~h~~~~~s~Dg--------r~~yv~~rdg~vsviD~------~~~---~~ 70 (369)
T PF02239_consen 14 GSGSVAVIDGATNKVVARI------PTGGAPHAGLKFSPDG--------RYLYVANRDGTVSVIDL------ATG---KV 70 (369)
T ss_dssp GGTEEEEEETTT-SEEEEE------E-STTEEEEEE-TT-S--------SEEEEEETTSEEEEEET------TSS---SE
T ss_pred CCCEEEEEECCCCeEEEEE------cCCCCceeEEEecCCC--------CEEEEEcCCCeEEEEEC------Ccc---cE
Confidence 3445578777654433322 222233 457799998 78888889999999999 455 67
Q ss_pred eeeeccccCCEEEEEEeCCCCCEEEEE-eCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC
Q 046451 116 IAHLSRHKGPVRGLEFNSFTPNLLASG-ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY 194 (719)
Q Consensus 116 ~~~l~~h~~~V~~l~fsp~~~~~lasg-s~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~ 194 (719)
+.++... ....++++++ |+++++++ ..++.|.|+|.++.+.+..+.............+..|..++....++++.-+
T Consensus 71 v~~i~~G-~~~~~i~~s~-DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd 148 (369)
T PF02239_consen 71 VATIKVG-GNPRGIAVSP-DGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKD 148 (369)
T ss_dssp EEEEE-S-SEEEEEEE---TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETT
T ss_pred EEEEecC-CCcceEEEcC-CCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEcc
Confidence 7777643 3467899999 77877765 4789999999999887666432221111234577788887776434555555
Q ss_pred CCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEee----CCCCCeeEE
Q 046451 195 NGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFV----GHTKGVIAM 270 (719)
Q Consensus 195 dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~----~h~~~V~~v 270 (719)
.+.|.+.|....+.+...............|+++++++++.....+ .|-++|.++. +.+..+. .|...+..+
T Consensus 149 ~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn---~i~viD~~~~-k~v~~i~~g~~p~~~~~~~~ 224 (369)
T PF02239_consen 149 TGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSN---KIAVIDTKTG-KLVALIDTGKKPHPGPGANF 224 (369)
T ss_dssp TTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGT---EEEEEETTTT-EEEEEEE-SSSBEETTEEEE
T ss_pred CCeEEEEEeccccccceeeecccccccccccCcccceeeecccccc---eeEEEeeccc-eEEEEeeccccccccccccc
Confidence 6889888987765443222135667788999999976666555555 8999998764 3333222 132233222
Q ss_pred -------EeCC-CCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEE----eCCCcEEEEeCC
Q 046451 271 -------SWCP-NDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISAS----SFDGKIGIYNIE 338 (719)
Q Consensus 271 -------~~sp-~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~----s~Dg~I~iwd~~ 338 (719)
.|.- ..+...++.-....+.+||..+.+.+.++...... ..+..+|+++ +|.+. ..++.|.|+|.+
T Consensus 225 php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~s~-~vwvd~~~~~~~~~v~viD~~ 302 (369)
T PF02239_consen 225 PHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHPDSR-YVWVDTFLNPDADTVQVIDKK 302 (369)
T ss_dssp EETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT-S-EEEEE-TT-SSHT-EEEEECC
T ss_pred cCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCc-ceeecCCCCc-cEEeeccCCCCCceEEEEECc
Confidence 1221 12333333333446778999999999999887666 7788999995 55554 556899999999
Q ss_pred CCcccc
Q 046451 339 GCSRYG 344 (719)
Q Consensus 339 ~~~~~~ 344 (719)
+.+...
T Consensus 303 tl~~~~ 308 (369)
T PF02239_consen 303 TLKVVK 308 (369)
T ss_dssp GTEEEE
T ss_pred CcceeE
Confidence 986654
No 248
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.36 E-value=2.5e-10 Score=119.80 Aligned_cols=305 Identities=12% Similarity=0.161 Sum_probs=190.3
Q ss_pred cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 10 SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 10 V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
+...++|++|+++|.++. ..++|++..... . ++. .... .++++.|+|.+ .+|.+
T Consensus 37 ~~v~~~S~~G~lfA~~~~-----------~~v~i~~~~~~~----~-~lt-~~~~-~~~~L~fSP~g--------~yL~T 90 (566)
T KOG2315|consen 37 CNVFAYSNNGRLFAYSDN-----------QVVKVFEIATLK----V-VLC-VELK-KTYDLLFSPKG--------NYLLT 90 (566)
T ss_pred ceeEEEcCCCcEEEEEcC-----------CeEEEEEccCCc----E-EEE-eccc-eeeeeeecccc--------ccccc
Confidence 567899999999998843 334677766443 1 111 1122 78899999987 45554
Q ss_pred E-----cC-----CCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCC
Q 046451 90 G-----LV-----DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEP 159 (719)
Q Consensus 90 g-----s~-----dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~ 159 (719)
= .. .-.+.+|+++ ++ .....+......-+++.|+. |. .|+.--..+.+++||+.+.+.+
T Consensus 91 ~e~~~i~~~~~~~~pn~~v~~ve------t~---~~~s~~q~k~Q~~W~~qfs~-dE-sl~arlv~nev~f~~~~~f~~~ 159 (566)
T KOG2315|consen 91 WEPWAIYGPKNASNPNVLVYNVE------TG---VQRSQIQKKMQNGWVPQFSI-DE-SLAARLVSNEVQFYDLGSFKTI 159 (566)
T ss_pred ccccccccCCCCCCCceeeeeec------cc---eehhheehhhhcCccccccc-ch-hhhhhhhcceEEEEecCCccce
Confidence 1 11 2357799984 33 33333332222226899988 43 3444444578999999885443
Q ss_pred CccCCccCCCCCCCCCeEEEEecCCCCc-EEEE-----EeCCCcEEEEECCCCceeEEec--CCCCCceeEEEECCCCCc
Q 046451 160 SHFPPLRGNGSAAQGEISFVSWNSKVQH-ILAS-----TSYNGTTVVWDLKKQKPVISFS--ESIKRRCSVLQWNPDVAT 231 (719)
Q Consensus 160 ~~~~~l~~~~~~h~~~I~~l~~sp~g~~-~l~s-----~s~dg~I~iwd~~~~~~~~~~~--~~~~~~i~~l~~sp~g~~ 231 (719)
.. .-|...|+.+.+++.... .+++ .+.-+.|+||.+........+. .-....-..+.|+.-|..
T Consensus 160 ~~--------kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~ 231 (566)
T KOG2315|consen 160 QH--------KLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTA 231 (566)
T ss_pred ee--------eeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCce
Confidence 22 224568999999987443 3333 3445689999887322111111 012333345789988877
Q ss_pred EEEEEeCCC--------CCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEE--EeCCCcEEEEECCCCeEEE
Q 046451 232 QLVVASDED--------SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLT--CAKDNRTICWDTVSGEIVS 301 (719)
Q Consensus 232 ~l~~~s~d~--------~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~s--gs~Dg~I~iwd~~~~~~~~ 301 (719)
+|+.++.|- ++.+++++++. +......+. ..+.|.++.|++ +++-|++ |-.--++.|||+ .++.+.
T Consensus 232 LLvLastdVDktn~SYYGEq~Lyll~t~-g~s~~V~L~-k~GPVhdv~W~~-s~~EF~VvyGfMPAkvtifnl-r~~~v~ 307 (566)
T KOG2315|consen 232 LLVLASTDVDKTNASYYGEQTLYLLATQ-GESVSVPLL-KEGPVHDVTWSP-SGREFAVVYGFMPAKVTIFNL-RGKPVF 307 (566)
T ss_pred EEEEEEEeecCCCccccccceEEEEEec-CceEEEecC-CCCCceEEEECC-CCCEEEEEEecccceEEEEcC-CCCEeE
Confidence 776665432 23478888886 333333333 468999999999 6654444 335678999999 567777
Q ss_pred EecCCCCCeEEeEEcCCCCCEEEEEeCC---CcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEE
Q 046451 302 ELPAGTNWNFDIHWYPKIPGVISASSFD---GKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSF 378 (719)
Q Consensus 302 ~l~~h~~~v~~l~~spdg~~~las~s~D---g~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~ 378 (719)
.+.. +.-+++-|+|.| ++|+.++.+ |.|.|||+.+.+++...+.. | .+.+.|++||.++.-
T Consensus 308 df~e--gpRN~~~fnp~g-~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~----------~---tt~~eW~PdGe~flT 371 (566)
T KOG2315|consen 308 DFPE--GPRNTAFFNPHG-NIILLAGFGNLPGDMEVWDVPNRKLIAKFKAA----------N---TTVFEWSPDGEYFLT 371 (566)
T ss_pred eCCC--CCccceEECCCC-CEEEEeecCCCCCceEEEeccchhhccccccC----------C---ceEEEEcCCCcEEEE
Confidence 6643 445688999999 677776665 79999999998887632211 1 134677777776543
Q ss_pred c
Q 046451 379 H 379 (719)
Q Consensus 379 ~ 379 (719)
.
T Consensus 372 A 372 (566)
T KOG2315|consen 372 A 372 (566)
T ss_pred E
Confidence 3
No 249
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.34 E-value=4.6e-10 Score=124.07 Aligned_cols=221 Identities=14% Similarity=0.116 Sum_probs=138.9
Q ss_pred cEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC---CcEEEEcCCCCCCCCccCCccCCCCC
Q 046451 95 SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD---GEICIWDLSAPAEPSHFPPLRGNGSA 171 (719)
Q Consensus 95 ~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d---g~I~iwdl~~~~~~~~~~~l~~~~~~ 171 (719)
.|.++|.+ + .....+..+...+....|+| |++.|+..+.+ ..|++||+.+++.... . .
T Consensus 180 ~l~~~d~~-------g---~~~~~l~~~~~~~~~p~wSp-DG~~la~~s~~~~~~~l~~~~l~~g~~~~l----~----~ 240 (430)
T PRK00178 180 TLQRSDYD-------G---ARAVTLLQSREPILSPRWSP-DGKRIAYVSFEQKRPRIFVQNLDTGRREQI----T----N 240 (430)
T ss_pred EEEEECCC-------C---CCceEEecCCCceeeeeECC-CCCEEEEEEcCCCCCEEEEEECCCCCEEEc----c----C
Confidence 36677762 2 33455556777889999999 77877665543 3699999987654221 1 1
Q ss_pred CCCCeEEEEecCCCCcEEEEEeCCC--cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEe
Q 046451 172 AQGEISFVSWNSKVQHILASTSYNG--TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWD 249 (719)
Q Consensus 172 h~~~I~~l~~sp~g~~~l~s~s~dg--~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwD 249 (719)
..+.+....|+++|..++++.+.+| .|++||+.+++.. .+. .+........|++||+.++++. +.++...|+++|
T Consensus 241 ~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt-~~~~~~~~~~~spDg~~i~f~s-~~~g~~~iy~~d 317 (430)
T PRK00178 241 FEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-RVT-NHPAIDTEPFWGKDGRTLYFTS-DRGGKPQIYKVN 317 (430)
T ss_pred CCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE-Ecc-cCCCCcCCeEECCCCCEEEEEE-CCCCCceEEEEE
Confidence 1224456899999875555666555 6888899887643 343 3445566789999997555554 333334688888
Q ss_pred cCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCC-C--cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEE
Q 046451 250 MRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD-N--RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISAS 326 (719)
Q Consensus 250 l~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~D-g--~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~ 326 (719)
+.++. ...+...........|+| |+++|+..+.+ + .|.+||+.+++... +.. ........|++||..++++.
T Consensus 318 ~~~g~--~~~lt~~~~~~~~~~~Sp-dg~~i~~~~~~~~~~~l~~~dl~tg~~~~-lt~-~~~~~~p~~spdg~~i~~~~ 392 (430)
T PRK00178 318 VNGGR--AERVTFVGNYNARPRLSA-DGKTLVMVHRQDGNFHVAAQDLQRGSVRI-LTD-TSLDESPSVAPNGTMLIYAT 392 (430)
T ss_pred CCCCC--EEEeecCCCCccceEECC-CCCEEEEEEccCCceEEEEEECCCCCEEE-ccC-CCCCCCceECCCCCEEEEEE
Confidence 86643 222322223344678999 78887766643 3 58889998876533 322 22234678999995555555
Q ss_pred eCCC--cEEEEeCCCCcc
Q 046451 327 SFDG--KIGIYNIEGCSR 342 (719)
Q Consensus 327 s~Dg--~I~iwd~~~~~~ 342 (719)
..++ .|.++++.+...
T Consensus 393 ~~~g~~~l~~~~~~g~~~ 410 (430)
T PRK00178 393 RQQGRGVLMLVSINGRVR 410 (430)
T ss_pred ecCCceEEEEEECCCCce
Confidence 4444 467777765443
No 250
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.34 E-value=7e-10 Score=121.52 Aligned_cols=231 Identities=11% Similarity=0.144 Sum_probs=137.9
Q ss_pred eeeccccCCEEEEEEeCCCCCE---EEEEeCCC--cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEE
Q 046451 117 AHLSRHKGPVRGLEFNSFTPNL---LASGADDG--EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILAS 191 (719)
Q Consensus 117 ~~l~~h~~~V~~l~fsp~~~~~---lasgs~dg--~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s 191 (719)
..+......+..-+|+| |++. +++...+| .|++.++.+++.... .. ..+......|+|||..++++
T Consensus 178 ~~lt~~~~~~~sP~wSP-DG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~l-t~-------~~g~~~~p~wSPDG~~Laf~ 248 (428)
T PRK01029 178 RPLTQEHSLSITPTWMH-IGSGFPYLYVSYKLGVPKIFLGSLENPAGKKI-LA-------LQGNQLMPTFSPRKKLLAFI 248 (428)
T ss_pred eEcccCCCCcccceEcc-CCCceEEEEEEccCCCceEEEEECCCCCceEe-ec-------CCCCccceEECCCCCEEEEE
Confidence 34444556667889999 5553 23444443 588888887654322 11 22244568999999755555
Q ss_pred EeCCC----cEEEEECCCC--ceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCC
Q 046451 192 TSYNG----TTVVWDLKKQ--KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTK 265 (719)
Q Consensus 192 ~s~dg----~I~iwd~~~~--~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~ 265 (719)
...+| .+.+||+..+ .....+...........+|+|||+.++++...++ ...|+++++.......+.+..+..
T Consensus 249 s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g-~~~ly~~~~~~~g~~~~~lt~~~~ 327 (428)
T PRK01029 249 SDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDG-RPRIYIMQIDPEGQSPRLLTKKYR 327 (428)
T ss_pred ECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCC-CceEEEEECcccccceEEeccCCC
Confidence 54333 3444777653 1222333122234567899999975555544443 224555565432233444555556
Q ss_pred CeeEEEeCCCCCCeEEEEeCC---CcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeC--CCcEEEEeCCCC
Q 046451 266 GVIAMSWCPNDSSYLLTCAKD---NRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSF--DGKIGIYNIEGC 340 (719)
Q Consensus 266 ~V~~v~~sp~d~~~l~sgs~D---g~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~--Dg~I~iwd~~~~ 340 (719)
.+....|+| |+++|+..+.+ ..|.+||+.+++... +......+....|++||..++++... +..|.+||+.++
T Consensus 328 ~~~~p~wSP-DG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g 405 (428)
T PRK01029 328 NSSCPAWSP-DGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITK 405 (428)
T ss_pred CccceeECC-CCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 778899999 88877766543 469999998887644 33333456789999999555555543 357888999887
Q ss_pred cccccCCCCCCCCCccCcceec
Q 046451 341 SRYGVGDSNFSAAPLRAPKWYK 362 (719)
Q Consensus 341 ~~~~~~~~~~~~~~~~~p~w~~ 362 (719)
+........ .....|.|..
T Consensus 406 ~~~~Lt~~~---g~~~~p~Ws~ 424 (428)
T PRK01029 406 KTRKIVIGS---GEKRFPSWGA 424 (428)
T ss_pred CEEEeecCC---CcccCceecC
Confidence 765433222 2235666754
No 251
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.32 E-value=2.3e-10 Score=122.30 Aligned_cols=290 Identities=18% Similarity=0.262 Sum_probs=200.6
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccc---------ee-ecccCCCCCceeeeecC
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDL---------LL-VGESPSSERFNRLAWGK 74 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~---------~~-~~~~~~~~~V~~l~~sp 74 (719)
.+.-...|++|+....|||+|+.||.+ +|.++.+...+... .. ....+|+..|.-+.|+.
T Consensus 12 PnnvkL~c~~WNke~gyIAcgG~dGlL----------KVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe 81 (1189)
T KOG2041|consen 12 PNNVKLHCAEWNKESGYIACGGADGLL----------KVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNE 81 (1189)
T ss_pred CCCceEEEEEEcccCCeEEecccccee----------EEEEccccCCcccccccccccccchhhhhccCcceEEEEEecc
Confidence 344567899999999999999999977 55555443322111 11 22357999999999998
Q ss_pred CCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCC
Q 046451 75 NGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLS 154 (719)
Q Consensus 75 ~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~ 154 (719)
+. +.|-+...+|.|.||-+.+... -..-.-...++-|.+++|+. +|..++....||.|.|=.++
T Consensus 82 ~~--------QKLTtSDt~GlIiVWmlykgsW-------~EEMiNnRnKSvV~SmsWn~-dG~kIcIvYeDGavIVGsvd 145 (1189)
T KOG2041|consen 82 NN--------QKLTTSDTSGLIIVWMLYKGSW-------CEEMINNRNKSVVVSMSWNL-DGTKICIVYEDGAVIVGSVD 145 (1189)
T ss_pred cc--------ccccccCCCceEEEEeeecccH-------HHHHhhCcCccEEEEEEEcC-CCcEEEEEEccCCEEEEeec
Confidence 86 7899999999999999843110 11111223566789999998 89999999999999988877
Q ss_pred CCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC-------ceeEEecC---CCCCceeEEE
Q 046451 155 APAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ-------KPVISFSE---SIKRRCSVLQ 224 (719)
Q Consensus 155 ~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~-------~~~~~~~~---~~~~~i~~l~ 224 (719)
..+....- +++. ....+.|++|. ..++.+-.+|.++++|.... .+...... .....|..+.
T Consensus 146 GNRIwgKe--Lkg~------~l~hv~ws~D~-~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~ 216 (1189)
T KOG2041|consen 146 GNRIWGKE--LKGQ------LLAHVLWSEDL-EQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIE 216 (1189)
T ss_pred cceecchh--cchh------eccceeecccH-HHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCcccccee
Confidence 66543321 3322 34578899996 46777788899999998643 11111110 2334466777
Q ss_pred EC--------CCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCC---------C
Q 046451 225 WN--------PDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD---------N 287 (719)
Q Consensus 225 ~s--------p~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~D---------g 287 (719)
|. ||. -.|+++...| .+.|..-.+...++..-.+ -.|..+.|++ +|.+|+.|+.| +
T Consensus 217 w~~g~~~~v~pdr-P~lavcy~nG---r~QiMR~eND~~Pvv~dtg--m~~vgakWnh-~G~vLAvcG~~~da~~~~d~n 289 (1189)
T KOG2041|consen 217 WNTGPYQPVPPDR-PRLAVCYANG---RMQIMRSENDPEPVVVDTG--MKIVGAKWNH-NGAVLAVCGNDSDADEPTDSN 289 (1189)
T ss_pred eccCccccCCCCC-CEEEEEEcCc---eehhhhhcCCCCCeEEecc--cEeecceecC-CCcEEEEccCcccccCccccc
Confidence 74 344 4688888887 7777766555555543333 6788999999 99999999865 3
Q ss_pred cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 288 RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 288 ~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
.|.+|.. -|+.+.+++.....|++++|-..| ..++.+- |+.|.+=+++-
T Consensus 290 ~v~Fysp-~G~i~gtlkvpg~~It~lsWEg~g-LriA~Av-dsfiyfanIRP 338 (1189)
T KOG2041|consen 290 KVHFYSP-YGHIVGTLKVPGSCITGLSWEGTG-LRIAIAV-DSFIYFANIRP 338 (1189)
T ss_pred eEEEecc-chhheEEEecCCceeeeeEEcCCc-eEEEEEe-cceEEEEeecc
Confidence 5666654 688899998888889999999887 4444443 66666655543
No 252
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.30 E-value=1.9e-10 Score=121.69 Aligned_cols=196 Identities=13% Similarity=0.207 Sum_probs=159.7
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEec------C-------------CCCcEEEEEeCC
Q 046451 135 TPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWN------S-------------KVQHILASTSYN 195 (719)
Q Consensus 135 ~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~s------p-------------~g~~~l~s~s~d 195 (719)
...++|....||.++|||..+++....|.+... -.+...+..|. + .+...++-|...
T Consensus 4 ~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~----~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~ 79 (541)
T KOG4547|consen 4 ALDYFALSTGDGRLRIWDTAKNQLQQEFAPIAS----LSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQ 79 (541)
T ss_pred hhheEeecCCCCeEEEEEccCceeeeeeccchh----ccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCC
Confidence 567899999999999999998887666533221 22344455552 1 123467888899
Q ss_pred CcEEEEECCCCceeEEec-CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCC
Q 046451 196 GTTVVWDLKKQKPVISFS-ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCP 274 (719)
Q Consensus 196 g~I~iwd~~~~~~~~~~~-~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp 274 (719)
|.|.+|++..++....+. ..|.+.|.++.++.+- ..|.+++.|. .+..|+.... ..++.+.+....+.+++.++
T Consensus 80 g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~-~ciyS~~ad~---~v~~~~~~~~-~~~~~~~~~~~~~~sl~is~ 154 (541)
T KOG4547|consen 80 GSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRL-GCIYSVGADL---KVVYILEKEK-VIIRIWKEQKPLVSSLCISP 154 (541)
T ss_pred ccEEEEEecCCeEEEEEecCCCCCcceeeeccccc-CceEecCCce---eEEEEecccc-eeeeeeccCCCccceEEEcC
Confidence 999999999999888887 4799999999999886 5788888887 8999998764 66777888888999999999
Q ss_pred CCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCC-----CCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 275 NDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPK-----IPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 275 ~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spd-----g~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
|+..|++++ +.|++||+++++.+..|.+|.+.|.++.|.-+ |.++|.+...+..|.+|-++....
T Consensus 155 -D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~~k 224 (541)
T KOG4547|consen 155 -DGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKEDK 224 (541)
T ss_pred -CCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEcccc
Confidence 899999886 68999999999999999999999999999887 667788888888999998887443
No 253
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.29 E-value=7.4e-10 Score=122.28 Aligned_cols=222 Identities=15% Similarity=0.157 Sum_probs=133.8
Q ss_pred CCCCCceeeeecCCCCCCCCCccceEEEEc-CCC--cEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCE
Q 046451 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGL-VDG--SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNL 138 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~~~~~~~lasgs-~dg--~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~ 138 (719)
.....+.+..|+||| +.|+..+ .++ .|++||+. ++ +. ..+....+......|+| |++.
T Consensus 215 ~~~~~~~~p~wSPDG--------~~La~~s~~~g~~~L~~~dl~------tg---~~-~~lt~~~g~~~~~~wSP-DG~~ 275 (448)
T PRK04792 215 RSPEPLMSPAWSPDG--------RKLAYVSFENRKAEIFVQDIY------TQ---VR-EKVTSFPGINGAPRFSP-DGKK 275 (448)
T ss_pred cCCCcccCceECCCC--------CEEEEEEecCCCcEEEEEECC------CC---Ce-EEecCCCCCcCCeeECC-CCCE
Confidence 356678899999998 5565543 333 57888873 22 21 22222233345789999 6665
Q ss_pred EE-EEeCCCc--EEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC--cEEEEECCCCceeEEec
Q 046451 139 LA-SGADDGE--ICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG--TTVVWDLKKQKPVISFS 213 (719)
Q Consensus 139 la-sgs~dg~--I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg--~I~iwd~~~~~~~~~~~ 213 (719)
|+ +.+.+|. |++||+.+++.. . +. .+.......+|+++|..++++...++ .|+++|+.+++......
T Consensus 276 La~~~~~~g~~~Iy~~dl~tg~~~-~---lt----~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~ 347 (448)
T PRK04792 276 LALVLSKDGQPEIYVVDIATKALT-R---IT----RHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTF 347 (448)
T ss_pred EEEEEeCCCCeEEEEEECCCCCeE-E---Cc----cCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEec
Confidence 55 5566665 777788765432 1 11 12335567899999865555554444 46777887776433222
Q ss_pred CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe-CCCc--EE
Q 046451 214 ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA-KDNR--TI 290 (719)
Q Consensus 214 ~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs-~Dg~--I~ 290 (719)
........+|++||+.++++...++ ...|.++|+.++. ...+... .......|+| |+++|+..+ .++. +.
T Consensus 348 --~g~~~~~~~~SpDG~~l~~~~~~~g-~~~I~~~dl~~g~--~~~lt~~-~~d~~ps~sp-dG~~I~~~~~~~g~~~l~ 420 (448)
T PRK04792 348 --EGEQNLGGSITPDGRSMIMVNRTNG-KFNIARQDLETGA--MQVLTST-RLDESPSVAP-NGTMVIYSTTYQGKQVLA 420 (448)
T ss_pred --CCCCCcCeeECCCCCEEEEEEecCC-ceEEEEEECCCCC--eEEccCC-CCCCCceECC-CCCEEEEEEecCCceEEE
Confidence 2223345799999976555544433 2356667876643 2333322 1223458999 777665544 4443 67
Q ss_pred EEECCCCeEEEEecCCCCCeEEeEEcCC
Q 046451 291 CWDTVSGEIVSELPAGTNWNFDIHWYPK 318 (719)
Q Consensus 291 iwd~~~~~~~~~l~~h~~~v~~l~~spd 318 (719)
++|. +|+....+..+.+.+...+|+|-
T Consensus 421 ~~~~-~G~~~~~l~~~~g~~~~p~Wsp~ 447 (448)
T PRK04792 421 AVSI-DGRFKARLPAGQGEVKSPAWSPF 447 (448)
T ss_pred EEEC-CCCceEECcCCCCCcCCCccCCC
Confidence 7787 66667777766666788889873
No 254
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.29 E-value=1.2e-08 Score=102.68 Aligned_cols=282 Identities=12% Similarity=0.169 Sum_probs=179.9
Q ss_pred CCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcC---CCcEEEEcCCccccCCCCCCC
Q 046451 37 SSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLV---DGSIDIWNPLSLISSGETGGN 113 (719)
Q Consensus 37 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~---dg~I~lwd~~~~~~~~~~~~~ 113 (719)
.+.-|++|++++.... +............+-|+|+++. ++|.++.. +|.|..|.++. .++ ..
T Consensus 14 ~s~gI~v~~ld~~~g~--l~~~~~v~~~~nptyl~~~~~~--------~~LY~v~~~~~~ggvaay~iD~----~~G-~L 78 (346)
T COG2706 14 ESQGIYVFNLDTKTGE--LSLLQLVAELGNPTYLAVNPDQ--------RHLYVVNEPGEEGGVAAYRIDP----DDG-RL 78 (346)
T ss_pred CCCceEEEEEeCcccc--cchhhhccccCCCceEEECCCC--------CEEEEEEecCCcCcEEEEEEcC----CCC-eE
Confidence 3667899999955443 3334456678889999999997 57777654 47788888753 112 11
Q ss_pred CceeeeccccCCEEEEEEeCCCCCEEEEEe-CCCcEEEEcCCCCCCCCcc-CCccCCCC-CC----CCCeEEEEecCCCC
Q 046451 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGA-DDGEICIWDLSAPAEPSHF-PPLRGNGS-AA----QGEISFVSWNSKVQ 186 (719)
Q Consensus 114 ~~~~~l~~h~~~V~~l~fsp~~~~~lasgs-~dg~I~iwdl~~~~~~~~~-~~l~~~~~-~h----~~~I~~l~~sp~g~ 186 (719)
..+.........-+.+++++ ++++|+++. ..|.|.++-++....+... ..+..... .| ...+.+..+.|++.
T Consensus 79 t~ln~~~~~g~~p~yvsvd~-~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~ 157 (346)
T COG2706 79 TFLNRQTLPGSPPCYVSVDE-DGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGR 157 (346)
T ss_pred EEeeccccCCCCCeEEEECC-CCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCC
Confidence 22222222223337889998 778877765 4689999999775443322 11111111 01 12378889999985
Q ss_pred cEEEEEe-CCCcEEEEECCCCceeEE--ecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC-
Q 046451 187 HILASTS-YNGTTVVWDLKKQKPVIS--FSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG- 262 (719)
Q Consensus 187 ~~l~s~s-~dg~I~iwd~~~~~~~~~--~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~- 262 (719)
+|++.+ .--+|.+|++..++.... ........-+.|.|+|+++..++++--++ +|.+|+.......+..+..
T Consensus 158 -~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~s---tV~v~~y~~~~g~~~~lQ~i 233 (346)
T COG2706 158 -YLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNS---TVDVLEYNPAVGKFEELQTI 233 (346)
T ss_pred -EEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCC---EEEEEEEcCCCceEEEeeee
Confidence 555544 345799999997654321 11135667789999999976666666666 8999998764333333322
Q ss_pred --------CCCCeeEEEeCCCCCCeEEEEeC-CCcEEEEECC--CCeE--EEEecCCCCCeEEeEEcCCCCCEEEEEe-C
Q 046451 263 --------HTKGVIAMSWCPNDSSYLLTCAK-DNRTICWDTV--SGEI--VSELPAGTNWNFDIHWYPKIPGVISASS-F 328 (719)
Q Consensus 263 --------h~~~V~~v~~sp~d~~~l~sgs~-Dg~I~iwd~~--~~~~--~~~l~~h~~~v~~l~~spdg~~~las~s-~ 328 (719)
...+...|..++ ||++|+++.. ...|-+|.+. ++++ +.....+...-.++.|++.+ ++|++++ +
T Consensus 234 ~tlP~dF~g~~~~aaIhis~-dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g-~~Liaa~q~ 311 (346)
T COG2706 234 DTLPEDFTGTNWAAAIHISP-DGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSG-RFLIAANQK 311 (346)
T ss_pred ccCccccCCCCceeEEEECC-CCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCC-CEEEEEccC
Confidence 234677899999 9999988863 3467788665 3432 23334455567899999999 4555554 4
Q ss_pred CCcEEEEeCCCC
Q 046451 329 DGKIGIYNIEGC 340 (719)
Q Consensus 329 Dg~I~iwd~~~~ 340 (719)
+..|.+|.++..
T Consensus 312 sd~i~vf~~d~~ 323 (346)
T COG2706 312 SDNITVFERDKE 323 (346)
T ss_pred CCcEEEEEEcCC
Confidence 568999987653
No 255
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.29 E-value=2.3e-11 Score=118.34 Aligned_cols=306 Identities=17% Similarity=0.254 Sum_probs=181.7
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCC--ceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCC
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSS--ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSED 81 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~--~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~ 81 (719)
+.+.+.|++|.|...|.|||+|+..|.|.+.-... ++-.-|-.++...+.++..+.+.+-.+.|+.|.|..++..
T Consensus 23 ~tead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r--- 99 (460)
T COG5170 23 STEADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGR--- 99 (460)
T ss_pred ccccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCc---
Confidence 45678899999999999999999989886522111 1111122233333444555666677889999999988743
Q ss_pred CccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCc
Q 046451 82 FSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSH 161 (719)
Q Consensus 82 ~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~ 161 (719)
..++..+.|.+|++|.+..... +.+.. .....---++..|. |.+- ..+++=.+.....+..
T Consensus 100 ---~hFLlstNdktiKlWKiyeknl-------k~va~-----nnls~~~~~~~~g~-~~s~---~~l~lprls~hd~iia 160 (460)
T COG5170 100 ---NHFLLSTNDKTIKLWKIYEKNL-------KVVAE-----NNLSDSFHSPMGGP-LTST---KELLLPRLSEHDEIIA 160 (460)
T ss_pred ---ceEEEecCCceeeeeeeecccc-------hhhhc-----cccccccccccCCC-cCCH---HHhhcccccccceEEE
Confidence 4566666899999999853210 11100 00000000110110 0000 0111111111110000
Q ss_pred cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-------CCCCceeEEEECCCCCcEEE
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-------SIKRRCSVLQWNPDVATQLV 234 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-------~~~~~i~~l~~sp~g~~~l~ 234 (719)
..+.+.....|...|+++.|+.+.+ .++ ...|-+|.+|+++.-.....+-+ .....|++..|+|.....+.
T Consensus 161 a~p~rvyaNaH~yhiNSiS~NsD~e-t~l-SaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fm 238 (460)
T COG5170 161 AKPCRVYANAHPYHINSISFNSDKE-TLL-SADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFM 238 (460)
T ss_pred eccceeccccceeEeeeeeecCchh-eee-eccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEE
Confidence 0001112245777899999999854 444 45677899999875432222211 12356888999999877888
Q ss_pred EEeCCCCCCcEEEEecCCCCCc-----eE----------EeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC-e
Q 046451 235 VASDEDSSPALRLWDMRNTMSP-----VK----------EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG-E 298 (719)
Q Consensus 235 ~~s~d~~~~~I~lwDl~~~~~~-----~~----------~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~-~ 298 (719)
.++..| .|++-|+|....+ +. .+.+-...|..+.|++ +|++|++-+ -.+|+|||.+.. .
T Consensus 239 YSsSkG---~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~-ngryIlsRd-yltvkiwDvnm~k~ 313 (460)
T COG5170 239 YSSSKG---EIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSD-NGRYILSRD-YLTVKIWDVNMAKN 313 (460)
T ss_pred EecCCC---cEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcC-CCcEEEEec-cceEEEEecccccC
Confidence 888877 8999999843211 11 1122335788999999 888887654 468999999854 4
Q ss_pred EEEEecCC------------CCCe---EEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 299 IVSELPAG------------TNWN---FDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 299 ~~~~l~~h------------~~~v---~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
++.++.-| .+.| +.+.|+.|. ..+.+|+..+...||-..+
T Consensus 314 pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~-~~v~sgsy~NNfgiyp~~s 368 (460)
T COG5170 314 PIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDD-KHVLSGSYSNNFGIYPTDS 368 (460)
T ss_pred CceeechHHHHHHHHHhhhhccceeeeEEEEecCCc-ccccccccccceeeecccc
Confidence 56665433 2333 458899888 7888999888888887544
No 256
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.27 E-value=1.9e-09 Score=111.91 Aligned_cols=309 Identities=16% Similarity=0.166 Sum_probs=198.6
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEE
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVA 88 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~la 88 (719)
.+..++|||.|.+|++....| |++|.......... . ....|..+.|+|++ .+|.
T Consensus 34 p~~~~~~SP~G~~l~~~~~~~-----------V~~~~g~~~~~l~~------~-~~~~V~~~~fSP~~--------kYL~ 87 (561)
T COG5354 34 PVAYVSESPLGTYLFSEHAAG-----------VECWGGPSKAKLVR------F-RHPDVKYLDFSPNE--------KYLV 87 (561)
T ss_pred chhheeecCcchheehhhccc-----------eEEccccchhheee------e-ecCCceecccCccc--------ceee
Confidence 467899999999999987665 35676553331111 1 23567889999988 6777
Q ss_pred EEcCC---------------CcEEEEcCCccccCCCCCCCCceeeeccccCC--EE-EEEEeCCCCCEEEEEeCCCcEEE
Q 046451 89 GGLVD---------------GSIDIWNPLSLISSGETGGNPLIAHLSRHKGP--VR-GLEFNSFTPNLLASGADDGEICI 150 (719)
Q Consensus 89 sgs~d---------------g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~--V~-~l~fsp~~~~~lasgs~dg~I~i 150 (719)
+=+.. ..+.+||+ .++ ..+..+...... .+ -+.|+- +..++|-. ....++|
T Consensus 88 tw~~~pi~~pe~e~sp~~~~n~~~vwd~------~sg---~iv~sf~~~~q~~~~Wp~~k~s~-~D~y~ARv-v~~sl~i 156 (561)
T COG5354 88 TWSREPIIEPEIEISPFTSKNNVFVWDI------ASG---MIVFSFNGISQPYLGWPVLKFSI-DDKYVARV-VGSSLYI 156 (561)
T ss_pred eeccCCccChhhccCCccccCceeEEec------cCc---eeEeeccccCCcccccceeeeee-cchhhhhh-ccCeEEE
Confidence 75433 35999999 566 777777765555 44 678887 55555544 3457999
Q ss_pred EcCCCCCC-CCccCCccCCCCCCCCCeEEEEecCCCCc-EEEE-----EeCCCcEEEEECCCCceeEEecCCCCCceeEE
Q 046451 151 WDLSAPAE-PSHFPPLRGNGSAAQGEISFVSWNSKVQH-ILAS-----TSYNGTTVVWDLKKQKPVISFSESIKRRCSVL 223 (719)
Q Consensus 151 wdl~~~~~-~~~~~~l~~~~~~h~~~I~~l~~sp~g~~-~l~s-----~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l 223 (719)
+++ +... ...+..++ ...|....|+|.+.+ .|+. .+..+++++|.+..++.+.+.. -....-..+
T Consensus 157 ~e~-t~n~~~~p~~~lr------~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~-lfk~~~~qL 228 (561)
T COG5354 157 HEI-TDNIEEHPFKNLR------PVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKN-LFKVSGVQL 228 (561)
T ss_pred Eec-CCccccCchhhcc------ccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeee-eEeecccEE
Confidence 997 3322 21211121 247888999987432 3343 4567899999999777766554 334445568
Q ss_pred EECCCCCcEEEEEeCCC-------CCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe--CCCcEEEEEC
Q 046451 224 QWNPDVATQLVVASDED-------SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA--KDNRTICWDT 294 (719)
Q Consensus 224 ~~sp~g~~~l~~~s~d~-------~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs--~Dg~I~iwd~ 294 (719)
.|+..|+++++..-.+- ++..++|++++... +....+..+.|.+++|.| .++.+++++ .+-.+.++|+
T Consensus 229 kW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~--i~V~~~~~~pVhdf~W~p-~S~~F~vi~g~~pa~~s~~~l 305 (561)
T COG5354 229 KWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS--IPVEKDLKDPVHDFTWEP-LSSRFAVISGYMPASVSVFDL 305 (561)
T ss_pred EEecCCceEEEEEEEeeecccceeccceEEEEeecccc--cceeccccccceeeeecc-cCCceeEEecccccceeeccc
Confidence 99999987665443221 12468999987432 333335678999999999 666555444 7788999999
Q ss_pred CCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCC---CcEEEEeCCCCcccc-cCCCCCCCCCccCcceecCCCceeee
Q 046451 295 VSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFD---GKIGIYNIEGCSRYG-VGDSNFSAAPLRAPKWYKRPAGASFG 370 (719)
Q Consensus 295 ~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~D---g~I~iwd~~~~~~~~-~~~~~~~~~~~~~p~w~~~~~~~s~s 370 (719)
+.. +...+.. ..-..+.|+|.+ ++++.++.| |.|.|||..+...+. ..+.. +-..+-|+
T Consensus 306 r~N-l~~~~Pe--~~rNT~~fsp~~-r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~-------------n~s~~~ws 368 (561)
T COG5354 306 RGN-LRFYFPE--QKRNTIFFSPHE-RYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGL-------------NTSYCDWS 368 (561)
T ss_pred ccc-eEEecCC--cccccccccCcc-cEEEEecCCccccceEEeccCCceEEEEEeecC-------------CceEeecc
Confidence 765 5544433 223567899999 666666665 689999988876544 11100 01224578
Q ss_pred eCCcEEEEccCC
Q 046451 371 FGGKLVSFHPKS 382 (719)
Q Consensus 371 ~~Gklv~~~~~~ 382 (719)
+||..+..+..+
T Consensus 369 pd~qF~~~~~ts 380 (561)
T COG5354 369 PDGQFYDTDTTS 380 (561)
T ss_pred CCceEEEecCCC
Confidence 888876655443
No 257
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.27 E-value=7e-09 Score=110.78 Aligned_cols=280 Identities=11% Similarity=0.182 Sum_probs=168.5
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccC-CCCCceeeeecCCCCCCCCCccc
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESP-SSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
......+++++++++|.+....+ ...+.|..|+++... ..+..+.... .......+++++++ +
T Consensus 36 ~~~Ps~l~~~~~~~~LY~~~e~~------~~~g~v~~~~i~~~~--g~L~~~~~~~~~g~~p~~i~~~~~g--------~ 99 (345)
T PF10282_consen 36 GENPSWLAVSPDGRRLYVVNEGS------GDSGGVSSYRIDPDT--GTLTLLNSVPSGGSSPCHIAVDPDG--------R 99 (345)
T ss_dssp SSSECCEEE-TTSSEEEEEETTS------STTTEEEEEEEETTT--TEEEEEEEEEESSSCEEEEEECTTS--------S
T ss_pred CCCCceEEEEeCCCEEEEEEccc------cCCCCEEEEEECCCc--ceeEEeeeeccCCCCcEEEEEecCC--------C
Confidence 34456789999999888886643 145566788877542 2233333333 34455678999998 4
Q ss_pred eEEEE-cCCCcEEEEcCCccccCCCCCCCCceeeec----------cccCCEEEEEEeCCCCCEEEEEe-CCCcEEEEcC
Q 046451 86 LVAGG-LVDGSIDIWNPLSLISSGETGGNPLIAHLS----------RHKGPVRGLEFNSFTPNLLASGA-DDGEICIWDL 153 (719)
Q Consensus 86 ~lasg-s~dg~I~lwd~~~~~~~~~~~~~~~~~~l~----------~h~~~V~~l~fsp~~~~~lasgs-~dg~I~iwdl 153 (719)
+|+++ ..+|.|.++++.. ++.-......+. .......++.|+| ++++|++.. ....|++|++
T Consensus 100 ~l~vany~~g~v~v~~l~~-----~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~p-dg~~v~v~dlG~D~v~~~~~ 173 (345)
T PF10282_consen 100 FLYVANYGGGSVSVFPLDD-----DGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSP-DGRFVYVPDLGADRVYVYDI 173 (345)
T ss_dssp EEEEEETTTTEEEEEEECT-----TSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-T-TSSEEEEEETTTTEEEEEEE
T ss_pred EEEEEEccCCeEEEEEccC-----CcccceeeeecccCCCCCcccccccccceeEEECC-CCCEEEEEecCCCEEEEEEE
Confidence 55555 5689999999953 120001111111 1234578999999 777766654 3458999999
Q ss_pred CCCCCC-CccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC--CCc--eeEEecC-----CCCCceeEE
Q 046451 154 SAPAEP-SHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK--KQK--PVISFSE-----SIKRRCSVL 223 (719)
Q Consensus 154 ~~~~~~-~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~--~~~--~~~~~~~-----~~~~~i~~l 223 (719)
...... .....+. ......-+.+.|++++..++++...+++|.++++. +++ .+..+.. ........|
T Consensus 174 ~~~~~~l~~~~~~~---~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 250 (345)
T PF10282_consen 174 DDDTGKLTPVDSIK---VPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEI 250 (345)
T ss_dssp -TTS-TEEEEEEEE---CSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEE
T ss_pred eCCCceEEEeeccc---cccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeE
Confidence 876522 1100011 12344678999999987666777778999999998 332 2222221 112267889
Q ss_pred EECCCCCcEEEEEeCCCCCCcEEEEecCCCCCce---EEeeCCCCCeeEEEeCCCCCCeEEEEe-CCCcEEEEEC--CCC
Q 046451 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPV---KEFVGHTKGVIAMSWCPNDSSYLLTCA-KDNRTICWDT--VSG 297 (719)
Q Consensus 224 ~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~---~~~~~h~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~--~~~ 297 (719)
++++||++++++....+ +|.+|++......+ ..+......-..+.+++ ++++|+++. .++.|.+|++ .+|
T Consensus 251 ~ispdg~~lyvsnr~~~---sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~-~g~~l~Va~~~s~~v~vf~~d~~tG 326 (345)
T PF10282_consen 251 AISPDGRFLYVSNRGSN---SISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSP-DGRYLYVANQDSNTVSVFDIDPDTG 326 (345)
T ss_dssp EE-TTSSEEEEEECTTT---EEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-T-TSSEEEEEETTTTEEEEEEEETTTT
T ss_pred EEecCCCEEEEEeccCC---EEEEEEEecCCCceEEEEEEeCCCCCccEEEEeC-CCCEEEEEecCCCeEEEEEEeCCCC
Confidence 99999976666666665 89999994332222 23333344578999999 888888776 6678999965 577
Q ss_pred eEEEEec-CCCCCeEEeEE
Q 046451 298 EIVSELP-AGTNWNFDIHW 315 (719)
Q Consensus 298 ~~~~~l~-~h~~~v~~l~~ 315 (719)
.+...-. ..-....||.|
T Consensus 327 ~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 327 KLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp EEEEEEEEEESSSEEEEEE
T ss_pred cEEEecccccCCCCEEEeC
Confidence 6544432 22234566665
No 258
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.27 E-value=9.2e-10 Score=121.26 Aligned_cols=208 Identities=18% Similarity=0.274 Sum_probs=134.6
Q ss_pred CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC---CcEEEEECCCCceeEEecCCCCCceeE
Q 046451 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN---GTTVVWDLKKQKPVISFSESIKRRCSV 222 (719)
Q Consensus 146 g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d---g~I~iwd~~~~~~~~~~~~~~~~~i~~ 222 (719)
..|.++|...... ..+ ..+...+...+|+++|. .|+.++.+ ..|++||+.+++...... +...+.+
T Consensus 170 ~~l~~~d~~g~~~-~~l-------~~~~~~~~~p~~Spdg~-~la~~~~~~~~~~i~v~d~~~g~~~~~~~--~~~~~~~ 238 (417)
T TIGR02800 170 YELQVADYDGANP-QTI-------TRSREPILSPAWSPDGQ-KLAYVSFESGKPEIYVQDLATGQREKVAS--FPGMNGA 238 (417)
T ss_pred ceEEEEcCCCCCC-EEe-------ecCCCceecccCCCCCC-EEEEEEcCCCCcEEEEEECCCCCEEEeec--CCCCccc
Confidence 3688888764332 221 12344688899999986 55554433 479999999876543332 4455677
Q ss_pred EEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeC-CC--cEEEEECCCCeE
Q 046451 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAK-DN--RTICWDTVSGEI 299 (719)
Q Consensus 223 l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~-Dg--~I~iwd~~~~~~ 299 (719)
++|++||+.++++...++ ...|++||+.+. ....+..+........|++ |++.|+..+. ++ .|++||+.+++.
T Consensus 239 ~~~spDg~~l~~~~~~~~-~~~i~~~d~~~~--~~~~l~~~~~~~~~~~~s~-dg~~l~~~s~~~g~~~iy~~d~~~~~~ 314 (417)
T TIGR02800 239 PAFSPDGSKLAVSLSKDG-NPDIYVMDLDGK--QLTRLTNGPGIDTEPSWSP-DGKSIAFTSDRGGSPQIYMMDADGGEV 314 (417)
T ss_pred eEECCCCCEEEEEECCCC-CccEEEEECCCC--CEEECCCCCCCCCCEEECC-CCCEEEEEECCCCCceEEEEECCCCCE
Confidence 899999976655554443 236999998764 2344555555556789999 8887776654 33 588888877664
Q ss_pred EEEecCCCCCeEEeEEcCCCCCEEEEEeCCC---cEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEE
Q 046451 300 VSELPAGTNWNFDIHWYPKIPGVISASSFDG---KIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLV 376 (719)
Q Consensus 300 ~~~l~~h~~~v~~l~~spdg~~~las~s~Dg---~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv 376 (719)
. .+..+...+..+.|+++| .+|+.++.++ .|.+||+.++......+.. .....+|++||+.+
T Consensus 315 ~-~l~~~~~~~~~~~~spdg-~~i~~~~~~~~~~~i~~~d~~~~~~~~l~~~~-------------~~~~p~~spdg~~l 379 (417)
T TIGR02800 315 R-RLTFRGGYNASPSWSPDG-DLIAFVHREGGGFNIAVMDLDGGGERVLTDTG-------------LDESPSFAPNGRMI 379 (417)
T ss_pred E-EeecCCCCccCeEECCCC-CEEEEEEccCCceEEEEEeCCCCCeEEccCCC-------------CCCCceECCCCCEE
Confidence 3 344455567889999999 5666666554 7888998876543322111 01234788888888
Q ss_pred EEccCCC
Q 046451 377 SFHPKSS 383 (719)
Q Consensus 377 ~~~~~~~ 383 (719)
+|.....
T Consensus 380 ~~~~~~~ 386 (417)
T TIGR02800 380 LYATTRG 386 (417)
T ss_pred EEEEeCC
Confidence 7776544
No 259
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.27 E-value=3.5e-10 Score=111.89 Aligned_cols=203 Identities=14% Similarity=0.289 Sum_probs=145.8
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasg 142 (719)
....++++.+..+. ..|++|-.+|++.-+.+.. +.......+....|...|..+-|+. ....+++.
T Consensus 67 mP~~~~~~~y~~e~--------~~L~vg~~ngtvtefs~se-----dfnkm~~~r~~~~h~~~v~~~if~~-~~e~V~s~ 132 (404)
T KOG1409|consen 67 MPSPCSAMEYVSES--------RRLYVGQDNGTVTEFALSE-----DFNKMTFLKDYLAHQARVSAIVFSL-THEWVLST 132 (404)
T ss_pred CCCCceEeeeeccc--------eEEEEEEecceEEEEEhhh-----hhhhcchhhhhhhhhcceeeEEecC-CceeEEEe
Confidence 46778899999887 7999999999999888742 1111134455667999999999987 67889999
Q ss_pred eCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC--CCceeEEecCCCCCce
Q 046451 143 ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK--KQKPVISFSESIKRRC 220 (719)
Q Consensus 143 s~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~--~~~~~~~~~~~~~~~i 220 (719)
+.|..+.-.-.+.+..+..+. +. ...+++.+.- .+...|...|.|.+..+. .-..+.++. +|...+
T Consensus 133 ~~dk~~~~hc~e~~~~lg~Y~-~~-------~~~t~~~~d~---~~~fvGd~~gqvt~lr~~~~~~~~i~~~~-~h~~~~ 200 (404)
T KOG1409|consen 133 GKDKQFAWHCTESGNRLGGYN-FE-------TPASALQFDA---LYAFVGDHSGQITMLKLEQNGCQLITTFN-GHTGEV 200 (404)
T ss_pred ccccceEEEeeccCCcccceE-ee-------ccCCCCceee---EEEEecccccceEEEEEeecCCceEEEEc-Ccccce
Confidence 988776544444444332220 00 0111111111 133445556666665544 345667777 899999
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~ 296 (719)
.+++|.+.. .+++++..|. .+.+||+-.......++.+|...|..++.-. --+.|++++.||.|.+||.+.
T Consensus 201 ~~l~Wd~~~-~~LfSg~~d~---~vi~wdigg~~g~~~el~gh~~kV~~l~~~~-~t~~l~S~~edg~i~~w~mn~ 271 (404)
T KOG1409|consen 201 TCLKWDPGQ-RLLFSGASDH---SVIMWDIGGRKGTAYELQGHNDKVQALSYAQ-HTRQLISCGEDGGIVVWNMNV 271 (404)
T ss_pred EEEEEcCCC-cEEEeccccC---ceEEEeccCCcceeeeeccchhhhhhhhhhh-hheeeeeccCCCeEEEEeccc
Confidence 999999986 6889999888 8999999766666788899999999998887 778899999999999999863
No 260
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.24 E-value=7.6e-11 Score=137.19 Aligned_cols=201 Identities=14% Similarity=0.267 Sum_probs=157.6
Q ss_pred eccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcE
Q 046451 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198 (719)
Q Consensus 119 l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I 198 (719)
++.+-..|.++.-+| ...+.++|+.||.|++|....+..+..+ +. . ....|+.+.|+.+| +.+..+..||.+
T Consensus 2204 ~k~~v~~v~r~~sHp-~~~~Yltgs~dgsv~~~~w~~~~~v~~~---rt--~-g~s~vtr~~f~~qG-nk~~i~d~dg~l 2275 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHP-SDPYYLTGSQDGSVRMFEWGHGQQVVCF---RT--A-GNSRVTRSRFNHQG-NKFGIVDGDGDL 2275 (2439)
T ss_pred eecccCceeeecCCC-CCceEEecCCCceEEEEeccCCCeEEEe---ec--c-CcchhhhhhhcccC-CceeeeccCCce
Confidence 344556788888888 5678889999999999999888776553 22 1 23689999999998 588889999999
Q ss_pred EEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCC
Q 046451 199 VVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS 278 (719)
Q Consensus 199 ~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~ 278 (719)
.+|.+. .++..... .|......+.|-. .++++++....++.+.+||.......-..-..|.++++++++.| ...
T Consensus 2276 ~l~q~~-pk~~~s~q-chnk~~~Df~Fi~---s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P-~~q 2349 (2439)
T KOG1064|consen 2276 SLWQAS-PKPYTSWQ-CHNKALSDFRFIG---SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAP-KHQ 2349 (2439)
T ss_pred eecccC-Ccceeccc-cCCccccceeeee---hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcC-cce
Confidence 999987 56666666 6888888888876 35666665544568999997543222222378999999999999 889
Q ss_pred eEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 279 YLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 279 ~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+|++||.+|.|++||++..+.++.+.. +. . +.++++++..|.|+||++..-.++.
T Consensus 2350 llisggr~G~v~l~D~rqrql~h~~~~---------~~-~-~~~f~~~ss~g~ikIw~~s~~~ll~ 2404 (2439)
T KOG1064|consen 2350 LLISGGRKGEVCLFDIRQRQLRHTFQA---------LD-T-REYFVTGSSEGNIKIWRLSEFGLLH 2404 (2439)
T ss_pred EEEecCCcCcEEEeehHHHHHHHHhhh---------hh-h-hheeeccCcccceEEEEccccchhh
Confidence 999999999999999998888777765 44 2 3699999999999999999876655
No 261
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.24 E-value=5e-08 Score=98.21 Aligned_cols=281 Identities=11% Similarity=0.156 Sum_probs=175.3
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCC-CCCceeeeecCCCCCCCCC
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPS-SERFNRLAWGKNGSGSEDF 82 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~-~~~V~~l~~sp~g~~~~~~ 82 (719)
+.+....+=++|++++++|.++..+|. .+.+..|.++.... .+.++..... ...-+.+++++++
T Consensus 36 v~~~~nptyl~~~~~~~~LY~v~~~~~-------~ggvaay~iD~~~G--~Lt~ln~~~~~g~~p~yvsvd~~g------ 100 (346)
T COG2706 36 VAELGNPTYLAVNPDQRHLYVVNEPGE-------EGGVAAYRIDPDDG--RLTFLNRQTLPGSPPCYVSVDEDG------ 100 (346)
T ss_pred ccccCCCceEEECCCCCEEEEEEecCC-------cCcEEEEEEcCCCC--eEEEeeccccCCCCCeEEEECCCC------
Confidence 445677788999999999999877652 45556666664322 2223322222 2233789999998
Q ss_pred ccceEEEEc-CCCcEEEEcCCccccCCCCCCCCceeeeccccCC----------EEEEEEeCCCCCEEEEEeC-CCcEEE
Q 046451 83 SLGLVAGGL-VDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGP----------VRGLEFNSFTPNLLASGAD-DGEICI 150 (719)
Q Consensus 83 ~~~~lasgs-~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~----------V~~l~fsp~~~~~lasgs~-dg~I~i 150 (719)
++|+++. ..|.|.++-+.. ++ .......+..|.+. +....|.| ++++|++.+- --+|.+
T Consensus 101 --~~vf~AnY~~g~v~v~p~~~-----dG-~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP-~~~~l~v~DLG~Dri~~ 171 (346)
T COG2706 101 --RFVFVANYHSGSVSVYPLQA-----DG-SLQPVVQVVKHTGSGPHERQESPHVHSANFTP-DGRYLVVPDLGTDRIFL 171 (346)
T ss_pred --CEEEEEEccCceEEEEEccc-----CC-ccccceeeeecCCCCCCccccCCccceeeeCC-CCCEEEEeecCCceEEE
Confidence 5777665 458899998842 12 22233333445555 88899999 7888887753 247999
Q ss_pred EcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC-ceeEEec------C--CCCCcee
Q 046451 151 WDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ-KPVISFS------E--SIKRRCS 221 (719)
Q Consensus 151 wdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~-~~~~~~~------~--~~~~~i~ 221 (719)
|++..+....... . .......-+.|.|+|+++...+++--+++|.+|..... ..+..+. . .......
T Consensus 172 y~~~dg~L~~~~~-~---~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~a 247 (346)
T COG2706 172 YDLDDGKLTPADP-A---EVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAA 247 (346)
T ss_pred EEcccCccccccc-c---ccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCcee
Confidence 9999655432211 1 11234467899999998644455556999999999873 2222221 1 3456778
Q ss_pred EEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEe---eCCCCCeeEEEeCCCCCCeEEEEeCC-CcEEEEECC--
Q 046451 222 VLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF---VGHTKGVIAMSWCPNDSSYLLTCAKD-NRTICWDTV-- 295 (719)
Q Consensus 222 ~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~---~~h~~~V~~v~~sp~d~~~l~sgs~D-g~I~iwd~~-- 295 (719)
.|.+++||+.++++-...+ .|.+|.+......+..+ ..+...-..+.|++ ++++|+++.+| ..|.+|.+.
T Consensus 248 aIhis~dGrFLYasNRg~d---sI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~-~g~~Liaa~q~sd~i~vf~~d~~ 323 (346)
T COG2706 248 AIHISPDGRFLYASNRGHD---SIAVFSVDPDGGKLELVGITPTEGQFPRDFNINP-SGRFLIAANQKSDNITVFERDKE 323 (346)
T ss_pred EEEECCCCCEEEEecCCCC---eEEEEEEcCCCCEEEEEEEeccCCcCCccceeCC-CCCEEEEEccCCCcEEEEEEcCC
Confidence 8999999964444444444 89999886543333322 22333467889999 88888887754 468888554
Q ss_pred CCeEEEEec-CCCCCeEEeEEc
Q 046451 296 SGEIVSELP-AGTNWNFDIHWY 316 (719)
Q Consensus 296 ~~~~~~~l~-~h~~~v~~l~~s 316 (719)
+|++-.... .......||.|.
T Consensus 324 TG~L~~~~~~~~~p~Pvcv~f~ 345 (346)
T COG2706 324 TGRLTLLGRYAVVPEPVCVKFL 345 (346)
T ss_pred CceEEecccccCCCCcEEEEEc
Confidence 565543332 233345566654
No 262
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.23 E-value=2.3e-09 Score=118.55 Aligned_cols=209 Identities=12% Similarity=0.153 Sum_probs=131.0
Q ss_pred cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC--CcEEEEECCCCceeEEecCCCCCceeEEE
Q 046451 147 EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN--GTTVVWDLKKQKPVISFSESIKRRCSVLQ 224 (719)
Q Consensus 147 ~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d--g~I~iwd~~~~~~~~~~~~~~~~~i~~l~ 224 (719)
.|.++|.+.... ..+ ..+...+....|+++|..++++...+ ..|++||+.+++.... . ...+.+....
T Consensus 180 ~l~~~d~~g~~~-~~l-------~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l-~-~~~g~~~~~~ 249 (430)
T PRK00178 180 TLQRSDYDGARA-VTL-------LQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQI-T-NFEGLNGAPA 249 (430)
T ss_pred EEEEECCCCCCc-eEE-------ecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEc-c-CCCCCcCCeE
Confidence 477888875442 221 12345788999999986444444333 3699999998765432 2 2334456789
Q ss_pred ECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeC-CC--cEEEEECCCCeEEE
Q 046451 225 WNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAK-DN--RTICWDTVSGEIVS 301 (719)
Q Consensus 225 ~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~-Dg--~I~iwd~~~~~~~~ 301 (719)
|+|||+.++++...++ ...|++||+.++. ...+..+........|++ |++.|+..+. +| .|+++|+.+++...
T Consensus 250 ~SpDG~~la~~~~~~g-~~~Iy~~d~~~~~--~~~lt~~~~~~~~~~~sp-Dg~~i~f~s~~~g~~~iy~~d~~~g~~~~ 325 (430)
T PRK00178 250 WSPDGSKLAFVLSKDG-NPEIYVMDLASRQ--LSRVTNHPAIDTEPFWGK-DGRTLYFTSDRGGKPQIYKVNVNGGRAER 325 (430)
T ss_pred ECCCCCEEEEEEccCC-CceEEEEECCCCC--eEEcccCCCCcCCeEECC-CCCEEEEEECCCCCceEEEEECCCCCEEE
Confidence 9999976655555443 2468899997642 344555655667789999 7776665553 33 57778887776433
Q ss_pred EecCCCCCeEEeEEcCCCCCEEEEEeCCC--cEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEc
Q 046451 302 ELPAGTNWNFDIHWYPKIPGVISASSFDG--KIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFH 379 (719)
Q Consensus 302 ~l~~h~~~v~~l~~spdg~~~las~s~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~ 379 (719)
+...........|++||..++++...++ .|.+||+.+++.....+.. + ....+|++||+.++|.
T Consensus 326 -lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~lt~~~----------~---~~~p~~spdg~~i~~~ 391 (430)
T PRK00178 326 -VTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRILTDTS----------L---DESPSVAPNGTMLIYA 391 (430)
T ss_pred -eecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEccCCC----------C---CCCceECCCCCEEEEE
Confidence 2222233456789999954444443344 5888999887654322111 1 1234788999988887
Q ss_pred cCCC
Q 046451 380 PKSS 383 (719)
Q Consensus 380 ~~~~ 383 (719)
....
T Consensus 392 ~~~~ 395 (430)
T PRK00178 392 TRQQ 395 (430)
T ss_pred EecC
Confidence 6543
No 263
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.21 E-value=6.9e-10 Score=109.86 Aligned_cols=255 Identities=17% Similarity=0.210 Sum_probs=176.4
Q ss_pred cccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCcee-eeccccCCEEEEEEeCCCCC
Q 046451 59 GESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIA-HLSRHKGPVRGLEFNSFTPN 137 (719)
Q Consensus 59 ~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~-~l~~h~~~V~~l~fsp~~~~ 137 (719)
...++.+.|++...-+.. .-+++.+.|.+++||--. ..+ +... ........++++.+.. +..
T Consensus 19 ~~eG~~d~vn~~~l~~~e--------~gv~~~s~drtvrv~lkr-----ds~---q~wpsI~~~mP~~~~~~~y~~-e~~ 81 (404)
T KOG1409|consen 19 KIEGSQDDVNAAILIPKE--------EGVISVSEDRTVRVWLKR-----DSG---QYWPSIYHYMPSPCSAMEYVS-ESR 81 (404)
T ss_pred hhcCchhhhhhheeccCC--------CCeEEccccceeeeEEec-----ccc---ccCchhhhhCCCCceEeeeec-cce
Confidence 334566777776666654 468899999999999642 222 2222 2222456788999988 788
Q ss_pred EEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCC
Q 046451 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIK 217 (719)
Q Consensus 138 ~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~ 217 (719)
.|++|-.+|++.-+.+...-....+ ......|...+..+-|+-.- .++++.+.|..+.---.+.+..+..+. ..
T Consensus 82 ~L~vg~~ngtvtefs~sedfnkm~~---~r~~~~h~~~v~~~if~~~~-e~V~s~~~dk~~~~hc~e~~~~lg~Y~--~~ 155 (404)
T KOG1409|consen 82 RLYVGQDNGTVTEFALSEDFNKMTF---LKDYLAHQARVSAIVFSLTH-EWVLSTGKDKQFAWHCTESGNRLGGYN--FE 155 (404)
T ss_pred EEEEEEecceEEEEEhhhhhhhcch---hhhhhhhhcceeeEEecCCc-eeEEEeccccceEEEeeccCCcccceE--ee
Confidence 9999999999999987665444332 22234678899999998774 588888888776655555555443322 11
Q ss_pred CceeEEEECCCCCcEEEEEeCCCCCCcEEEEecC-CCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC
Q 046451 218 RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR-NTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 218 ~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~-~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~ 296 (719)
...+++.|.-. ....|... +.|.+..+. +.-.++.++.+|.+.+.+++|.+ ...+|++|..|..|.+||+.-
T Consensus 156 ~~~t~~~~d~~---~~fvGd~~---gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~-~~~~LfSg~~d~~vi~wdigg 228 (404)
T KOG1409|consen 156 TPASALQFDAL---YAFVGDHS---GQITMLKLEQNGCQLITTFNGHTGEVTCLKWDP-GQRLLFSGASDHSVIMWDIGG 228 (404)
T ss_pred ccCCCCceeeE---EEEecccc---cceEEEEEeecCCceEEEEcCcccceEEEEEcC-CCcEEEeccccCceEEEeccC
Confidence 11111111111 12222222 355554443 22356788999999999999999 889999999999999999965
Q ss_pred Ce-EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 297 GE-IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 297 ~~-~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
++ ...++.+|.+.|..+..-..- +.|.+++.||.|.+||++..+.+.
T Consensus 229 ~~g~~~el~gh~~kV~~l~~~~~t-~~l~S~~edg~i~~w~mn~~r~et 276 (404)
T KOG1409|consen 229 RKGTAYELQGHNDKVQALSYAQHT-RQLISCGEDGGIVVWNMNVKRVET 276 (404)
T ss_pred Ccceeeeeccchhhhhhhhhhhhh-eeeeeccCCCeEEEEeccceeecC
Confidence 43 456778899989888877776 789999999999999999877654
No 264
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.21 E-value=8e-09 Score=107.40 Aligned_cols=298 Identities=13% Similarity=0.145 Sum_probs=190.0
Q ss_pred cCccceEEEcCCCCeEEEeeccceeec-----ccCCCceEEEEEeeccCCcccceeecccCCCCCce-eeeecCCCCCCC
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDL-----SFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFN-RLAWGKNGSGSE 80 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v-----~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~-~l~~sp~g~~~~ 80 (719)
...|..+.|||.++||.+-+..+.+.= -+...+.+.+||+..+.....+.... .....+ -+.|+-+.
T Consensus 71 ~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~---q~~~~Wp~~k~s~~D---- 143 (561)
T COG5354 71 HPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGIS---QPYLGWPVLKFSIDD---- 143 (561)
T ss_pred cCCceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccC---Ccccccceeeeeecc----
Confidence 356889999999999999887775311 22344578999998765443332211 111133 67788875
Q ss_pred CCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC-CCCEEEE-----EeCCCcEEEEcCC
Q 046451 81 DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF-TPNLLAS-----GADDGEICIWDLS 154 (719)
Q Consensus 81 ~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~-~~~~las-----gs~dg~I~iwdl~ 154 (719)
.++|-- ....++|+++.... +. ...+.++ ...|....|+|. +...||. ...++.++||.+.
T Consensus 144 ----~y~ARv-v~~sl~i~e~t~n~---~~---~p~~~lr--~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp 210 (561)
T COG5354 144 ----KYVARV-VGSSLYIHEITDNI---EE---HPFKNLR--PVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIP 210 (561)
T ss_pred ----hhhhhh-ccCeEEEEecCCcc---cc---Cchhhcc--ccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEcc
Confidence 333322 45679999962211 11 2222232 356888899984 2334443 3567889999998
Q ss_pred CCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe----------CCCcEEEEECCCCceeEEecCCCCCceeEEE
Q 046451 155 APAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS----------YNGTTVVWDLKKQKPVISFSESIKRRCSVLQ 224 (719)
Q Consensus 155 ~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s----------~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~ 224 (719)
....+.....++ ..-..+.|+..|..+|+-.- ....++|++++...+.... ...+.|...+
T Consensus 211 ~~s~l~tk~lfk-------~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~--~~~~pVhdf~ 281 (561)
T COG5354 211 KNSVLVTKNLFK-------VSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEK--DLKDPVHDFT 281 (561)
T ss_pred CCCeeeeeeeEe-------ecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceec--cccccceeee
Confidence 655443321111 12346888888764443221 1256889998854443333 3688999999
Q ss_pred ECCCCCcEEEEE-eCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCC---CcEEEEECCCCeEE
Q 046451 225 WNPDVATQLVVA-SDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD---NRTICWDTVSGEIV 300 (719)
Q Consensus 225 ~sp~g~~~l~~~-s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~D---g~I~iwd~~~~~~~ 300 (719)
|.|.++.+.++. ..+. .+.++|++.. ..+......-..+.|+| .+++++.++.| |.|.+||......+
T Consensus 282 W~p~S~~F~vi~g~~pa---~~s~~~lr~N----l~~~~Pe~~rNT~~fsp-~~r~il~agF~nl~gni~i~~~~~rf~~ 353 (561)
T COG5354 282 WEPLSSRFAVISGYMPA---SVSVFDLRGN----LRFYFPEQKRNTIFFSP-HERYILFAGFDNLQGNIEIFDPAGRFKV 353 (561)
T ss_pred ecccCCceeEEeccccc---ceeecccccc----eEEecCCcccccccccC-cccEEEEecCCccccceEEeccCCceEE
Confidence 999987655555 3444 8999999864 22333444556788999 88999988766 67999998766544
Q ss_pred E-EecCCCCCeEEeEEcCCCCCEEEEEe------CCCcEEEEeCCCCcccc
Q 046451 301 S-ELPAGTNWNFDIHWYPKIPGVISASS------FDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 301 ~-~l~~h~~~v~~l~~spdg~~~las~s------~Dg~I~iwd~~~~~~~~ 344 (719)
. .+.+.+ ..-+.|+||+ .++.+.. .|..|+|||+.+.....
T Consensus 354 ~~~~~~~n--~s~~~wspd~-qF~~~~~ts~k~~~Dn~i~l~~v~g~~~fe 401 (561)
T COG5354 354 AGAFNGLN--TSYCDWSPDG-QFYDTDTTSEKLRVDNSIKLWDVYGAKVFE 401 (561)
T ss_pred EEEeecCC--ceEeeccCCc-eEEEecCCCcccccCcceEEEEecCchhhh
Confidence 4 665543 4567899999 4554432 37899999999877753
No 265
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=99.21 E-value=2.5e-09 Score=111.91 Aligned_cols=317 Identities=15% Similarity=0.245 Sum_probs=192.5
Q ss_pred CccceEEEcCCCCeEEEeeccceeeccc-CCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSF-SSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~-s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
..|.-+.|||..+||+|-+..-...-|. .....+.|||+.++...+.+.+... ....---+.||.|+ .+
T Consensus 250 p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~--~~~~WP~frWS~Dd--------Ky 319 (698)
T KOG2314|consen 250 PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKS--PYLKWPIFRWSHDD--------KY 319 (698)
T ss_pred CCceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCC--CccccceEEeccCC--------ce
Confidence 4577889999999999876544332222 2457889999999988777755321 11222346899997 57
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC-----CcEEEEcCCCCCCCCc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD-----GEICIWDLSAPAEPSH 161 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d-----g~I~iwdl~~~~~~~~ 161 (719)
+|.-.. .+|.||+..+. .++..-.-.-..|....|+| .+++||-=... ..+.+..+.+.+.++.
T Consensus 320 ~Arm~~-~sisIyEtpsf---------~lld~Kslki~gIr~FswsP-~~~llAYwtpe~~~~parvtL~evPs~~~iRt 388 (698)
T KOG2314|consen 320 FARMTG-NSISIYETPSF---------MLLDKKSLKISGIRDFSWSP-TSNLLAYWTPETNNIPARVTLMEVPSKREIRT 388 (698)
T ss_pred eEEecc-ceEEEEecCce---------eeecccccCCccccCcccCC-CcceEEEEcccccCCcceEEEEecCccceeee
Confidence 776655 57999987321 11111122346788899999 66776643221 2345555555544433
Q ss_pred cCCccCCCCCCCCCeEEEEecCCCCcEEEEE----------eCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCc
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKVQHILAST----------SYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~----------s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~ 231 (719)
...+ .-.=..+.|-.+|. +|+.- +.-..+.|+.++....-...- .....|...+|.|.|+.
T Consensus 389 ~nlf-------nVsDckLhWQk~gd-yLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~v-elke~vi~FaWEP~gdk 459 (698)
T KOG2314|consen 389 KNLF-------NVSDCKLHWQKSGD-YLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVV-ELKESVIAFAWEPHGDK 459 (698)
T ss_pred ccce-------eeeccEEEeccCCc-EEEEEEEeeccccccceEeeEEEEEeeccCCCceee-ecchheeeeeeccCCCe
Confidence 2111 11112456666664 44431 111235566666554322222 36778899999999976
Q ss_pred EEEEEeCCCCCCcEEEEecCC-CCC--ceEEeeCCCCCeeEEEeCCCCCCeEEEEe---CCCcEEEEECCCCeEEEE-ec
Q 046451 232 QLVVASDEDSSPALRLWDMRN-TMS--PVKEFVGHTKGVIAMSWCPNDSSYLLTCA---KDNRTICWDTVSGEIVSE-LP 304 (719)
Q Consensus 232 ~l~~~s~d~~~~~I~lwDl~~-~~~--~~~~~~~h~~~V~~v~~sp~d~~~l~sgs---~Dg~I~iwd~~~~~~~~~-l~ 304 (719)
+.+..+.+. ..++.+|.+++ ..+ .+..+. ....+.+.|+| .|++++.+. ..|.+.++|+.-...... ..
T Consensus 460 F~vi~g~~~-k~tvsfY~~e~~~~~~~lVk~~d--k~~~N~vfwsP-kG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~ 535 (698)
T KOG2314|consen 460 FAVISGNTV-KNTVSFYAVETNIKKPSLVKELD--KKFANTVFWSP-KGRFVVVAALVSRRGDLEFYDTDYADLKDTASP 535 (698)
T ss_pred EEEEEcccc-ccceeEEEeecCCCchhhhhhhc--ccccceEEEcC-CCcEEEEEEecccccceEEEecchhhhhhccCc
Confidence 655555543 34899999873 222 233333 35678899999 888887664 578899999974333222 22
Q ss_pred CCCCCeEEeEEcCCCCCEEEEEeC------CCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCC
Q 046451 305 AGTNWNFDIHWYPKIPGVISASSF------DGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPA 365 (719)
Q Consensus 305 ~h~~~v~~l~~spdg~~~las~s~------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~ 365 (719)
.|. ..+.+.|.|.| +++++++. |.--+||++.+..+....-..|. -..|-+++.
T Consensus 536 eh~-~at~veWDPtG-RYvvT~ss~wrhk~d~GYri~tfqGrll~~~~i~~f~-----qF~WRPRPp 595 (698)
T KOG2314|consen 536 EHF-AATEVEWDPTG-RYVVTSSSSWRHKVDNGYRIFTFQGRLLKEDIIDRFK-----QFLWRPRPP 595 (698)
T ss_pred ccc-ccccceECCCC-CEEEEeeehhhhccccceEEEEeecHHHHHHHHHHHH-----hhccCCCCC
Confidence 343 37889999999 78777764 56678999888766443322332 234776654
No 266
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.21 E-value=6.4e-10 Score=124.49 Aligned_cols=144 Identities=19% Similarity=0.321 Sum_probs=121.3
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
-++++|+.-+.|.+|+.. .. ..-..+.+|.+.|..+.|+. |++++++.++|.++++|++++.+...
T Consensus 146 ~~i~~gsv~~~iivW~~~------~d---n~p~~l~GHeG~iF~i~~s~-dg~~i~s~SdDRsiRlW~i~s~~~~~---- 211 (967)
T KOG0974|consen 146 LYIASGSVFGEIIVWKPH------ED---NKPIRLKGHEGSIFSIVTSL-DGRYIASVSDDRSIRLWPIDSREVLG---- 211 (967)
T ss_pred EEEEeccccccEEEEecc------cc---CCcceecccCCceEEEEEcc-CCcEEEEEecCcceeeeecccccccC----
Confidence 689999999999999984 22 22237899999999999998 89999999999999999999987643
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
...-+|...|+.++|++. .+++++.|-++++|+.+ ++.+..+..+....|..++.+.+. .+++++++|+ .
T Consensus 212 --~~~fgHsaRvw~~~~~~n---~i~t~gedctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~~-~~~vT~g~Ds---~ 281 (967)
T KOG0974|consen 212 --CTGFGHSARVWACCFLPN---RIITVGEDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIGV-IIKVTGGNDS---T 281 (967)
T ss_pred --cccccccceeEEEEeccc---eeEEeccceEEEEEecc-cceehhhhhhhhcceeEEEEcCCc-eEEEeeccCc---c
Confidence 345579999999999987 79999999999999766 444556665667789999999886 6889999998 8
Q ss_pred EEEEecCC
Q 046451 245 LRLWDMRN 252 (719)
Q Consensus 245 I~lwDl~~ 252 (719)
+++||+..
T Consensus 282 lk~~~l~~ 289 (967)
T KOG0974|consen 282 LKLWDLNG 289 (967)
T ss_pred hhhhhhhc
Confidence 99999864
No 267
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.19 E-value=1.2e-08 Score=111.75 Aligned_cols=229 Identities=16% Similarity=0.146 Sum_probs=132.5
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCC--cEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDG--SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg--~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
....+.+-+|+|||... .++++...+| .|.+.++. .+ ....+....+.....+|+| |++.|+
T Consensus 183 ~~~~~~sP~wSPDG~~~-----~~~y~S~~~g~~~I~~~~l~------~g----~~~~lt~~~g~~~~p~wSP-DG~~La 246 (428)
T PRK01029 183 EHSLSITPTWMHIGSGF-----PYLYVSYKLGVPKIFLGSLE------NP----AGKKILALQGNQLMPTFSP-RKKLLA 246 (428)
T ss_pred CCCCcccceEccCCCce-----EEEEEEccCCCceEEEEECC------CC----CceEeecCCCCccceEECC-CCCEEE
Confidence 34456778999998411 1333555554 46666763 22 1222233344456789999 677666
Q ss_pred EEeC-CC----cEEEEcCCCCC--CCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEE--ECCC-CceeE
Q 046451 141 SGAD-DG----EICIWDLSAPA--EPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVW--DLKK-QKPVI 210 (719)
Q Consensus 141 sgs~-dg----~I~iwdl~~~~--~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iw--d~~~-~~~~~ 210 (719)
..+. +| .+.+||+..+. ....+ .. .........+|+|+|..++++...+|...|| ++.. +....
T Consensus 247 f~s~~~g~~di~~~~~~~~~g~~g~~~~l--t~----~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~ 320 (428)
T PRK01029 247 FISDRYGNPDLFIQSFSLETGAIGKPRRL--LN----EAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPR 320 (428)
T ss_pred EEECCCCCcceeEEEeecccCCCCcceEe--ec----CCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceE
Confidence 5442 33 33446766531 11111 11 1122345689999986555555556754555 5442 23333
Q ss_pred EecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeC---CC
Q 046451 211 SFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAK---DN 287 (719)
Q Consensus 211 ~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~---Dg 287 (719)
.+. .....+....|+|||+.++++...+ +...|++||+.++. .+.+......+....|+| |+++|+..+. +.
T Consensus 321 ~lt-~~~~~~~~p~wSPDG~~Laf~~~~~-g~~~I~v~dl~~g~--~~~Lt~~~~~~~~p~wSp-DG~~L~f~~~~~g~~ 395 (428)
T PRK01029 321 LLT-KKYRNSSCPAWSPDGKKIAFCSVIK-GVRQICVYDLATGR--DYQLTTSPENKESPSWAI-DSLHLVYSAGNSNES 395 (428)
T ss_pred Eec-cCCCCccceeECCCCCEEEEEEcCC-CCcEEEEEECCCCC--eEEccCCCCCccceEECC-CCCEEEEEECCCCCc
Confidence 343 3345667899999997555554433 33479999997653 234443344667899999 7777765432 35
Q ss_pred cEEEEECCCCeEEEEecCCCCCeEEeEEcCCC
Q 046451 288 RTICWDTVSGEIVSELPAGTNWNFDIHWYPKI 319 (719)
Q Consensus 288 ~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg 319 (719)
.|.+||+..++..... .....+...+|+|..
T Consensus 396 ~L~~vdl~~g~~~~Lt-~~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 396 ELYLISLITKKTRKIV-IGSGEKRFPSWGAFP 426 (428)
T ss_pred eEEEEECCCCCEEEee-cCCCcccCceecCCC
Confidence 6888899877654443 334446778888754
No 268
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.18 E-value=4.2e-08 Score=116.06 Aligned_cols=303 Identities=16% Similarity=0.235 Sum_probs=179.9
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCC---C----------ceEEEEEeeccCCccccee-----------------
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSS---S----------ANLEIFKLDFQSEDRDLLL----------------- 57 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~---~----------~~i~iwd~~~~~~~~~~~~----------------- 57 (719)
..|.+++||||+.+||..+.+|.|.+-... - +.-+.-++--++++..+.-
T Consensus 121 ~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~ 200 (928)
T PF04762_consen 121 SGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPK 200 (928)
T ss_pred CcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCc
Confidence 578999999999999999999888651100 0 0001111111111111100
Q ss_pred --ecccCCCCCceeeeecCCCCCCCCCccceEEEEcC---C---CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEE
Q 046451 58 --VGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLV---D---GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGL 129 (719)
Q Consensus 58 --~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~---d---g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l 129 (719)
.+.....+.-..|+|-.|| .++|+.+. + ..|+||+-+ | ....+...-.+--.++
T Consensus 201 ~d~~~~s~dd~~~~ISWRGDG--------~yFAVss~~~~~~~~R~iRVy~Re-------G---~L~stSE~v~gLe~~l 262 (928)
T PF04762_consen 201 VDEGKLSWDDGRVRISWRGDG--------EYFAVSSVEPETGSRRVIRVYSRE-------G---ELQSTSEPVDGLEGAL 262 (928)
T ss_pred cccCccccCCCceEEEECCCC--------cEEEEEEEEcCCCceeEEEEECCC-------c---eEEeccccCCCccCCc
Confidence 0001133455678999998 68888764 2 579999953 3 3333333333334578
Q ss_pred EEeCCCCCEEEEEeC---CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC
Q 046451 130 EFNSFTPNLLASGAD---DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ 206 (719)
Q Consensus 130 ~fsp~~~~~lasgs~---dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~ 206 (719)
+|.| .|++||+... ...|.+|.-+..+ -..|. ++. ......|..+.|+.++ .+|+....|. |.+|-..+.
T Consensus 263 ~WrP-sG~lIA~~q~~~~~~~VvFfErNGLr-hgeF~-l~~--~~~~~~v~~l~Wn~ds-~iLAv~~~~~-vqLWt~~NY 335 (928)
T PF04762_consen 263 SWRP-SGNLIASSQRLPDRHDVVFFERNGLR-HGEFT-LRF--DPEEEKVIELAWNSDS-EILAVWLEDR-VQLWTRSNY 335 (928)
T ss_pred cCCC-CCCEEEEEEEcCCCcEEEEEecCCcE-eeeEe-cCC--CCCCceeeEEEECCCC-CEEEEEecCC-ceEEEeeCC
Confidence 9999 8899998765 3556777644322 22221 221 2235579999999997 5888877655 999998875
Q ss_pred ce--eEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecC----CCC-------CceEEee------------
Q 046451 207 KP--VISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR----NTM-------SPVKEFV------------ 261 (719)
Q Consensus 207 ~~--~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~----~~~-------~~~~~~~------------ 261 (719)
.- ...+.......+..+.|++.....|.+...++ .+..+++. ... ..+..+.
T Consensus 336 HWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g---~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a 412 (928)
T PF04762_consen 336 HWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNG---QYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRA 412 (928)
T ss_pred EEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCC---cEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEeccccc
Confidence 42 22222224445566999998877777777754 45443331 110 0011111
Q ss_pred -----------CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE--------EEEe----------cCCCCCeEE
Q 046451 262 -----------GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI--------VSEL----------PAGTNWNFD 312 (719)
Q Consensus 262 -----------~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~--------~~~l----------~~h~~~v~~ 312 (719)
.....|.+++|++ ++..+++-..||.|.+|+...... ...+ ......+..
T Consensus 413 ~VPPPMs~~~l~~~~~v~~vaf~~-~~~~~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (928)
T PF04762_consen 413 VVPPPMSSYELELPSPVNDVAFSP-SNSRFAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQ 491 (928)
T ss_pred CCCchHhceEEcCCCCcEEEEEeC-CCCeEEEEECCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEE
Confidence 1246789999999 666799999999999998543211 1111 112345788
Q ss_pred eEEcCCCCCEEEEEeCC---CcEEEEeCCCC
Q 046451 313 IHWYPKIPGVISASSFD---GKIGIYNIEGC 340 (719)
Q Consensus 313 l~~spdg~~~las~s~D---g~I~iwd~~~~ 340 (719)
++|..+. .+++....+ ..+.++++...
T Consensus 492 ~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ 521 (928)
T PF04762_consen 492 LAWLNDD-TLLVLSDSDSNQSKIVLVDIDDS 521 (928)
T ss_pred EEEeCCC-EEEEEEecCcccceEEEEEeccC
Confidence 8998887 555555543 68888888544
No 269
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=99.18 E-value=2.2e-08 Score=104.89 Aligned_cols=307 Identities=13% Similarity=0.185 Sum_probs=191.5
Q ss_pred ceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEE
Q 046451 11 ASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGG 90 (719)
Q Consensus 11 ~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasg 90 (719)
+-+.|||.|.||++-...|. .+|--..-. .+..+.| -.|.-+.|||+. ++|++-
T Consensus 214 tyv~wSP~GTYL~t~Hk~GI-----------~lWGG~~f~------r~~RF~H-p~Vq~idfSP~E--------kYLVT~ 267 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQGI-----------ALWGGESFD------RIQRFYH-PGVQFIDFSPNE--------KYLVTY 267 (698)
T ss_pred eeEEecCCceEEEEEeccce-----------eeecCccHH------HHHhccC-CCceeeecCCcc--------ceEEEe
Confidence 45899999999999877764 466432111 1222334 457789999987 788885
Q ss_pred cC-----------CCcEEEEcCCccccCCCCCCCCceeeecc---ccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCC
Q 046451 91 LV-----------DGSIDIWNPLSLISSGETGGNPLIAHLSR---HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAP 156 (719)
Q Consensus 91 s~-----------dg~I~lwd~~~~~~~~~~~~~~~~~~l~~---h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~ 156 (719)
+. ...++|||+ .+| ...+.+.. ....---+.||. |++++|.-.. ..|.||+....
T Consensus 268 s~~p~~~~~~d~e~~~l~IWDI------~tG---~lkrsF~~~~~~~~~WP~frWS~-DdKy~Arm~~-~sisIyEtpsf 336 (698)
T KOG2314|consen 268 SPEPIIVEEDDNEGQQLIIWDI------ATG---LLKRSFPVIKSPYLKWPIFRWSH-DDKYFARMTG-NSISIYETPSF 336 (698)
T ss_pred cCCccccCcccCCCceEEEEEc------ccc---chhcceeccCCCccccceEEecc-CCceeEEecc-ceEEEEecCce
Confidence 42 257999999 556 44444443 122223467888 7788887776 57999987664
Q ss_pred CCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC-----CCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCc
Q 046451 157 AEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY-----NGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231 (719)
Q Consensus 157 ~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~-----dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~ 231 (719)
.... . ..-.-+.|....|+|.+ ++||.-.. -.++.+..+.+++.+++.. -+.-.=..+-|-.+|++
T Consensus 337 ~lld------~-Kslki~gIr~FswsP~~-~llAYwtpe~~~~parvtL~evPs~~~iRt~n-lfnVsDckLhWQk~gdy 407 (698)
T KOG2314|consen 337 MLLD------K-KSLKISGIRDFSWSPTS-NLLAYWTPETNNIPARVTLMEVPSKREIRTKN-LFNVSDCKLHWQKSGDY 407 (698)
T ss_pred eeec------c-cccCCccccCcccCCCc-ceEEEEcccccCCcceEEEEecCccceeeecc-ceeeeccEEEeccCCcE
Confidence 3221 1 11234478999999995 57765332 2467788888887777655 34433445677777764
Q ss_pred EEEEEeCC------CCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe-C--CCcEEEEECCC----Ce
Q 046451 232 QLVVASDE------DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA-K--DNRTICWDTVS----GE 298 (719)
Q Consensus 232 ~l~~~s~d------~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs-~--Dg~I~iwd~~~----~~ 298 (719)
+.+-...- +....+.|+.++...-++..+. -...|..++|-| .|+.+++-+ . ..++.+|.+++ .+
T Consensus 408 LcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~ve-lke~vi~FaWEP-~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~ 485 (698)
T KOG2314|consen 408 LCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVE-LKESVIAFAWEP-HGDKFAVISGNTVKNTVSFYAVETNIKKPS 485 (698)
T ss_pred EEEEEEeeccccccceEeeEEEEEeeccCCCceeee-cchheeeeeecc-CCCeEEEEEccccccceeEEEeecCCCchh
Confidence 43322111 1112467777776555555443 456889999999 666555443 3 35788998763 23
Q ss_pred EEEEecCCCCCeEEeEEcCCCCCEEEEE---eCCCcEEEEeCCC--CcccccCCCCCCCCCccCcceecCCCceeeeeCC
Q 046451 299 IVSELPAGTNWNFDIHWYPKIPGVISAS---SFDGKIGIYNIEG--CSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGG 373 (719)
Q Consensus 299 ~~~~l~~h~~~v~~l~~spdg~~~las~---s~Dg~I~iwd~~~--~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~G 373 (719)
++..+.. ...+.+.|+|.| ++++.+ |..|.+.++|+.. .+.++..++... .-+.|.+.|
T Consensus 486 lVk~~dk--~~~N~vfwsPkG-~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~~a-------------t~veWDPtG 549 (698)
T KOG2314|consen 486 LVKELDK--KFANTVFWSPKG-RFVVVAALVSRRGDLEFYDTDYADLKDTASPEHFAA-------------TEVEWDPTG 549 (698)
T ss_pred hhhhhcc--cccceEEEcCCC-cEEEEEEecccccceEEEecchhhhhhccCcccccc-------------ccceECCCC
Confidence 3444433 457789999999 566554 4578999999984 444444444322 235677778
Q ss_pred cEEEEccC
Q 046451 374 KLVSFHPK 381 (719)
Q Consensus 374 klv~~~~~ 381 (719)
+++.-+..
T Consensus 550 RYvvT~ss 557 (698)
T KOG2314|consen 550 RYVVTSSS 557 (698)
T ss_pred CEEEEeee
Confidence 87654443
No 270
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.14 E-value=3.3e-08 Score=103.40 Aligned_cols=265 Identities=9% Similarity=0.007 Sum_probs=153.3
Q ss_pred ceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEc---------CCCcEEEEcCCccccCCC
Q 046451 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGL---------VDGSIDIWNPLSLISSGE 109 (719)
Q Consensus 39 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs---------~dg~I~lwd~~~~~~~~~ 109 (719)
+.+.+.|.+..+....+ .....-..+ +++|++ .+.++.+ .+..|.+||. .+
T Consensus 27 ~~v~ViD~~~~~v~g~i------~~G~~P~~~-~spDg~-------~lyva~~~~~R~~~G~~~d~V~v~D~------~t 86 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMT------DGGFLPNPV-VASDGS-------FFAHASTVYSRIARGKRTDYVEVIDP------QT 86 (352)
T ss_pred ceEEEEECCCCEEEEEE------EccCCCcee-ECCCCC-------EEEEEeccccccccCCCCCEEEEEEC------cc
Confidence 66788888754432222 222233344 999984 4444555 6889999999 44
Q ss_pred CCCCCceeeeccc-------cCCEEEEEEeCCCCCEEEEEe-C-CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEE
Q 046451 110 TGGNPLIAHLSRH-------KGPVRGLEFNSFTPNLLASGA-D-DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVS 180 (719)
Q Consensus 110 ~~~~~~~~~l~~h-------~~~V~~l~fsp~~~~~lasgs-~-dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~ 180 (719)
. +.+..+..- ...-..+++++ |+++|++.. . +..|.|+|+.+.+.+..+.. .+...-..
T Consensus 87 ~---~~~~~i~~p~~p~~~~~~~~~~~~ls~-dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~v--------p~~~~vy~ 154 (352)
T TIGR02658 87 H---LPIADIELPEGPRFLVGTYPWMTSLTP-DNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDV--------PDCYHIFP 154 (352)
T ss_pred C---cEEeEEccCCCchhhccCccceEEECC-CCCEEEEecCCCCCEEEEEECCCCcEEEEEeC--------CCCcEEEE
Confidence 4 555554421 12234788999 788777665 3 78999999999887665421 11111112
Q ss_pred ecCCCCcEEEEEeCCCcEEEEECCC-Ccee-EEecC--CCCCce-eEEEECC-CCCcEEEEEeCCCCCCcEEEEecCCCC
Q 046451 181 WNSKVQHILASTSYNGTTVVWDLKK-QKPV-ISFSE--SIKRRC-SVLQWNP-DVATQLVVASDEDSSPALRLWDMRNTM 254 (719)
Q Consensus 181 ~sp~g~~~l~s~s~dg~I~iwd~~~-~~~~-~~~~~--~~~~~i-~~l~~sp-~g~~~l~~~s~d~~~~~I~lwDl~~~~ 254 (719)
.+.. . +.+-+.||......+.. ++.. .+... .....+ ..-.|.+ +| .++++... + +|.+.|+....
T Consensus 155 t~e~-~--~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg-~~~~vs~e-G---~V~~id~~~~~ 226 (352)
T TIGR02658 155 TAND-T--FFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSG-RLVWPTYT-G---KIFQIDLSSGD 226 (352)
T ss_pred ecCC-c--cEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCC-cEEEEecC-C---eEEEEecCCCc
Confidence 2222 1 11223444444433332 1111 11000 000000 0003455 66 45555555 5 89999974432
Q ss_pred ----CceEEeeC-------CCCCeeEEEeCCCCCCeEEEEe----------CCCcEEEEECCCCeEEEEecCCCCCeEEe
Q 046451 255 ----SPVKEFVG-------HTKGVIAMSWCPNDSSYLLTCA----------KDNRTICWDTVSGEIVSELPAGTNWNFDI 313 (719)
Q Consensus 255 ----~~~~~~~~-------h~~~V~~v~~sp~d~~~l~sgs----------~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l 313 (719)
..+..+.. ..+.+.-+++++ +++.++... ..+.|.++|..+++.+..+... ..+..+
T Consensus 227 ~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~-dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG-~~~~~i 304 (352)
T TIGR02658 227 AKFLPAIEAFTEAEKADGWRPGGWQQVAYHR-ARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELG-HEIDSI 304 (352)
T ss_pred ceecceeeeccccccccccCCCcceeEEEcC-CCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCC-CceeeE
Confidence 12222211 223444599999 767666632 2258999999999999998764 359999
Q ss_pred EEcCCCCCEEE-EEeCCCcEEEEeCCCCccccc
Q 046451 314 HWYPKIPGVIS-ASSFDGKIGIYNIEGCSRYGV 345 (719)
Q Consensus 314 ~~spdg~~~la-s~s~Dg~I~iwd~~~~~~~~~ 345 (719)
+|++|+..+|+ +...++.|.|+|+.+++.+..
T Consensus 305 avS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~ 337 (352)
T TIGR02658 305 NVSQDAKPLLYALSTGDKTLYIFDAETGKELSS 337 (352)
T ss_pred EECCCCCeEEEEeCCCCCcEEEEECcCCeEEee
Confidence 99999952555 554688999999999988763
No 271
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.14 E-value=4.6e-09 Score=111.31 Aligned_cols=188 Identities=18% Similarity=0.273 Sum_probs=142.9
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeee---ccccCCEEEEEEe-------------------CCCCCEEEEE
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL---SRHKGPVRGLEFN-------------------SFTPNLLASG 142 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l---~~h~~~V~~l~fs-------------------p~~~~~lasg 142 (719)
.++|....||.+++||... + +....+ ..-.+...++.|. ..+...|+-|
T Consensus 6 ~~~A~~~~~g~l~iw~t~~------~---~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlg 76 (541)
T KOG4547|consen 6 DYFALSTGDGRLRIWDTAK------N---QLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLG 76 (541)
T ss_pred heEeecCCCCeEEEEEccC------c---eeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEee
Confidence 6899999999999999843 2 222222 1123344444442 1144578889
Q ss_pred eCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeE
Q 046451 143 ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSV 222 (719)
Q Consensus 143 s~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~ 222 (719)
...|.|.+|++..++....+ ....|.+.|.++.|+.+- ..|.+++.|+.+..|+....+.++.+. .....+.+
T Consensus 77 t~~g~v~~ys~~~g~it~~~-----st~~h~~~v~~~~~~~~~-~ciyS~~ad~~v~~~~~~~~~~~~~~~-~~~~~~~s 149 (541)
T KOG4547|consen 77 TPQGSVLLYSVAGGEITAKL-----STDKHYGNVNEILDAQRL-GCIYSVGADLKVVYILEKEKVIIRIWK-EQKPLVSS 149 (541)
T ss_pred cCCccEEEEEecCCeEEEEE-----ecCCCCCcceeeeccccc-CceEecCCceeEEEEecccceeeeeec-cCCCccce
Confidence 99999999999988876543 234688899999998885 589999999999999999999988888 77888999
Q ss_pred EEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCC----CCCeEEE-EeCCCcEEEEECC
Q 046451 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPN----DSSYLLT-CAKDNRTICWDTV 295 (719)
Q Consensus 223 l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~----d~~~l~s-gs~Dg~I~iwd~~ 295 (719)
+++++|| .++++++. .|++||+++. +.+..|.+|.+.|.++.|--. .|.++++ ...+..+.+|-++
T Consensus 150 l~is~D~-~~l~~as~-----~ik~~~~~~k-evv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~ 220 (541)
T KOG4547|consen 150 LCISPDG-KILLTASR-----QIKVLDIETK-EVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVE 220 (541)
T ss_pred EEEcCCC-CEEEeccc-----eEEEEEccCc-eEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEE
Confidence 9999998 46777765 6999999875 789999999999999999762 1455554 4456667788554
No 272
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=99.14 E-value=7e-09 Score=112.38 Aligned_cols=296 Identities=12% Similarity=0.116 Sum_probs=189.7
Q ss_pred cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCC----ccc
Q 046451 10 SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDF----SLG 85 (719)
Q Consensus 10 V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~----~~~ 85 (719)
-.++.|++.| +||.|+.+ .+.+.|...-+..+.+ ..|...|+.+.|.|...-...+ ..-
T Consensus 18 ~~A~Dw~~~G-LiAygshs-----------lV~VVDs~s~q~iqsi-----e~h~s~V~~VrWap~~~p~~llS~~~~~l 80 (1062)
T KOG1912|consen 18 RNAADWSPSG-LIAYGSHS-----------LVSVVDSRSLQLIQSI-----ELHQSAVTSVRWAPAPSPRDLLSPSSSQL 80 (1062)
T ss_pred ccccccCccc-eEEEecCc-----------eEEEEehhhhhhhhcc-----ccCccceeEEEeccCCCchhccCccccce
Confidence 4567888877 78888543 3345555433333332 2377899999999865322221 234
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeC--CCC-CEEEEEeCCCcEEEEcCCCCCCCCcc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNS--FTP-NLLASGADDGEICIWDLSAPAEPSHF 162 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp--~~~-~~lasgs~dg~I~iwdl~~~~~~~~~ 162 (719)
+||++...|.|.+||. ..+ ..+..+..|.+.+.+++|-+ ++. ..|+.-.....|.+|+..+++....+
T Consensus 81 liAsaD~~GrIil~d~------~~~---s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~ 151 (1062)
T KOG1912|consen 81 LIASADISGRIILVDF------VLA---SVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKY 151 (1062)
T ss_pred eEEeccccCcEEEEEe------hhh---hhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeecc
Confidence 7888889999999998 455 66778888999999999965 233 57777788889999999999876442
Q ss_pred CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC-------ceeEEecCCCCC-----------------
Q 046451 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ-------KPVISFSESIKR----------------- 218 (719)
Q Consensus 163 ~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~-------~~~~~~~~~~~~----------------- 218 (719)
........|+.++|-+.+.+..-+..|.+.+.+.-.. +...... .|..
T Consensus 152 -------~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~s-d~Sdl~~lere~at~ns~ts~ 223 (1062)
T KOG1912|consen 152 -------DYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITS-DHSDLAHLERETATGNSTTST 223 (1062)
T ss_pred -------ccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEec-CccchhhhhhhhhccccccCC
Confidence 1123366779998876666766677777777765321 1111111 1111
Q ss_pred --------ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCC-CCCeEEEEeCCCcE
Q 046451 219 --------RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPN-DSSYLLTCAKDNRT 289 (719)
Q Consensus 219 --------~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~-d~~~l~sgs~Dg~I 289 (719)
.+..++|+|.-++.++.....+ +.++|++-. .++....-..+.+.-+.|-|+ ..+.|++.-.||.+
T Consensus 224 ~~sa~fity~a~faf~p~~rn~lfi~~pre----llv~dle~~-~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~l 298 (1062)
T KOG1912|consen 224 PASAYFITYCAQFAFSPHWRNILFITFPRE----LLVFDLEYE-CCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRL 298 (1062)
T ss_pred CcchhHHHHHHhhhcChhhhceEEEEeccc----eEEEcchhh-ceeEEEEeccCCcceeEeccCCCcceEEEEecCCeE
Confidence 0223567888777777777764 999999753 555555555566666777762 23578899999999
Q ss_pred EEEECCCC----------------eEEEEecC-CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 290 ICWDTVSG----------------EIVSELPA-GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 290 ~iwd~~~~----------------~~~~~l~~-h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
.||-.+.. +.+..+.. .+-.+......|..+..++.--.+|.+.+|.+.+++...
T Consensus 299 tirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~ 370 (1062)
T KOG1912|consen 299 TIRVRKEEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHL 370 (1062)
T ss_pred EEEEeeccCccccccchhhccccccceEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCc
Confidence 99966541 11111111 111233334445544455555558899999999876644
No 273
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.13 E-value=2.1e-08 Score=120.79 Aligned_cols=250 Identities=11% Similarity=0.109 Sum_probs=160.3
Q ss_pred eeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc--------------ccCCEEEEEEeCC
Q 046451 69 RLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR--------------HKGPVRGLEFNSF 134 (719)
Q Consensus 69 ~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~--------------h~~~V~~l~fsp~ 134 (719)
.++++.++. .++++-+.++.|++||... ..+..+.. +-.....|++++
T Consensus 572 gvavd~~~g-------~lyVaDs~n~rI~v~d~~G----------~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~- 633 (1057)
T PLN02919 572 KLAIDLLNN-------RLFISDSNHNRIVVTDLDG----------NFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNA- 633 (1057)
T ss_pred eEEEECCCC-------eEEEEECCCCeEEEEeCCC----------CEEEEEccCCCcCCCCCchhccccCCCcEEEEeC-
Confidence 567766431 5777777888999999732 22222111 112357889988
Q ss_pred CCCEEEEE-eCCCcEEEEcCCCCCCCCccCC-------ccCCCC---CCCCCeEEEEecCCCCcEEEEEeCCCcEEEEEC
Q 046451 135 TPNLLASG-ADDGEICIWDLSAPAEPSHFPP-------LRGNGS---AAQGEISFVSWNSKVQHILASTSYNGTTVVWDL 203 (719)
Q Consensus 135 ~~~~lasg-s~dg~I~iwdl~~~~~~~~~~~-------l~~~~~---~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~ 203 (719)
+++.|+++ ..++.|+++|+.++.. ..+.. ..+... ..-..-..++|++++..++++.+.++.|++||.
T Consensus 634 ~gn~LYVaDt~n~~Ir~id~~~~~V-~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~ 712 (1057)
T PLN02919 634 KKNLLYVADTENHALREIDFVNETV-RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNI 712 (1057)
T ss_pred CCCEEEEEeCCCceEEEEecCCCEE-EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEEC
Confidence 55655444 4567899999876432 11100 000000 001134579999965567888888999999999
Q ss_pred CCCceeEEecC-------C------CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEE-----------
Q 046451 204 KKQKPVISFSE-------S------IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE----------- 259 (719)
Q Consensus 204 ~~~~~~~~~~~-------~------~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~----------- 259 (719)
.++........ . .-.....|+|++++..++++...++ .|++||+.++...+..
T Consensus 713 ~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~---~Irv~D~~tg~~~~~~gg~~~~~~~l~ 789 (1057)
T PLN02919 713 SDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESS---SIRALDLKTGGSRLLAGGDPTFSDNLF 789 (1057)
T ss_pred CCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCC---eEEEEECCCCcEEEEEecccccCcccc
Confidence 87654321100 0 1123567999999876666666665 8999999764321110
Q ss_pred -eeCC--------CCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec-------------CCCCCeEEeEEcC
Q 046451 260 -FVGH--------TKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP-------------AGTNWNFDIHWYP 317 (719)
Q Consensus 260 -~~~h--------~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~-------------~h~~~v~~l~~sp 317 (719)
+..+ ...-..++|++ +++++++-..+++|++||..++....... +.......|++++
T Consensus 790 ~fG~~dG~g~~~~l~~P~Gvavd~-dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~ 868 (1057)
T PLN02919 790 KFGDHDGVGSEVLLQHPLGVLCAK-DGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGE 868 (1057)
T ss_pred cccCCCCchhhhhccCCceeeEeC-CCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeC
Confidence 0000 11235788998 88888888899999999998876653321 1123578899999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 318 KIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 318 dg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
+| +++++-+.+++|++||+.+++.
T Consensus 869 dG-~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 869 NG-RLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred CC-CEEEEECCCCEEEEEECCCCcc
Confidence 99 7899989999999999998865
No 274
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.12 E-value=3.3e-09 Score=113.62 Aligned_cols=245 Identities=15% Similarity=0.240 Sum_probs=168.5
Q ss_pred CCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCC------CCCCceeeeccccCCEEEEEEeCCC
Q 046451 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGET------GGNPLIAHLSRHKGPVRGLEFNSFT 135 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~------~~~~~~~~l~~h~~~V~~l~fsp~~ 135 (719)
.......|++|+.+. ++|++|+.||.++|..+.+....... .....-.++.+|++.|.-+.|+. +
T Consensus 12 PnnvkL~c~~WNke~--------gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe-~ 82 (1189)
T KOG2041|consen 12 PNNVKLHCAEWNKES--------GYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNE-N 82 (1189)
T ss_pred CCCceEEEEEEcccC--------CeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecc-c
Confidence 345667899999987 89999999999999988653321111 11233467889999999999998 7
Q ss_pred CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCC
Q 046451 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSES 215 (719)
Q Consensus 136 ~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~ 215 (719)
.+.|-+...+|.|.||-+-.+...... .....++.|.+++|+.+|. .++....||.|.+=.++..+.... . -
T Consensus 83 ~QKLTtSDt~GlIiVWmlykgsW~EEM-----iNnRnKSvV~SmsWn~dG~-kIcIvYeDGavIVGsvdGNRIwgK-e-L 154 (1189)
T KOG2041|consen 83 NQKLTTSDTSGLIIVWMLYKGSWCEEM-----INNRNKSVVVSMSWNLDGT-KICIVYEDGAVIVGSVDGNRIWGK-E-L 154 (1189)
T ss_pred cccccccCCCceEEEEeeecccHHHHH-----hhCcCccEEEEEEEcCCCc-EEEEEEccCCEEEEeeccceecch-h-c
Confidence 788999999999999998877654332 1223466899999999985 788889999998887775443221 1 1
Q ss_pred CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC------ceEE----eeCCCCCeeEEEeCC-------CCCC
Q 046451 216 IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS------PVKE----FVGHTKGVIAMSWCP-------NDSS 278 (719)
Q Consensus 216 ~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~------~~~~----~~~h~~~V~~v~~sp-------~d~~ 278 (719)
.......+.|++|.+ +++.+-..+ .+.+||...... +... +......|-.+.|.. -|.-
T Consensus 155 kg~~l~hv~ws~D~~-~~Lf~~ang---e~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP 230 (1189)
T KOG2041|consen 155 KGQLLAHVLWSEDLE-QALFKKANG---ETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRP 230 (1189)
T ss_pred chheccceeecccHH-HHHhhhcCC---cEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCC
Confidence 233455789999975 444454454 799999764321 1111 111222466677752 1566
Q ss_pred eEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCC
Q 046451 279 YLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFD 329 (719)
Q Consensus 279 ~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~D 329 (719)
.|+.|-.+|++.|..-.+...-..+... -.|.+..|+++| .+|+.++.|
T Consensus 231 ~lavcy~nGr~QiMR~eND~~Pvv~dtg-m~~vgakWnh~G-~vLAvcG~~ 279 (1189)
T KOG2041|consen 231 RLAVCYANGRMQIMRSENDPEPVVVDTG-MKIVGAKWNHNG-AVLAVCGND 279 (1189)
T ss_pred EEEEEEcCceehhhhhcCCCCCeEEecc-cEeecceecCCC-cEEEEccCc
Confidence 8999999999988755443322223322 458899999999 788888765
No 275
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.12 E-value=1.8e-07 Score=96.45 Aligned_cols=223 Identities=14% Similarity=0.174 Sum_probs=150.9
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCC-C---CCeEEEE-ecCCCCcEEEEEeCCCcEEEEECCCCcee
Q 046451 135 TPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAA-Q---GEISFVS-WNSKVQHILASTSYNGTTVVWDLKKQKPV 209 (719)
Q Consensus 135 ~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h-~---~~I~~l~-~sp~g~~~l~s~s~dg~I~iwd~~~~~~~ 209 (719)
|++.++- +..|.|++||-.+.+....-..+....... . ....-+. |+.-.+.+++..+. |...|.+...+-.+
T Consensus 277 DGkrIvF-q~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~~~~i 354 (668)
T COG4946 277 DGKRIVF-QNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWDGYSI 354 (668)
T ss_pred CCcEEEE-ecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCCCeeE
Confidence 5555543 345789999988765432211111110000 0 0111111 33333457777665 56777776555433
Q ss_pred EEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcE
Q 046451 210 ISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRT 289 (719)
Q Consensus 210 ~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I 289 (719)
. + ++...|.-..+.-+++ -++.|..|+. .|-|||.+++ .++.+...-+.|.++..++ +|++++.+.....|
T Consensus 355 q-v--~~~~~VrY~r~~~~~e-~~vigt~dgD--~l~iyd~~~~--e~kr~e~~lg~I~av~vs~-dGK~~vvaNdr~el 425 (668)
T COG4946 355 Q-V--GKKGGVRYRRIQVDPE-GDVIGTNDGD--KLGIYDKDGG--EVKRIEKDLGNIEAVKVSP-DGKKVVVANDRFEL 425 (668)
T ss_pred E-c--CCCCceEEEEEccCCc-ceEEeccCCc--eEEEEecCCc--eEEEeeCCccceEEEEEcC-CCcEEEEEcCceEE
Confidence 3 2 4677788888888876 5666766653 7999999864 3566777788999999999 99999999999999
Q ss_pred EEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCC----cEEEEeCCCCcccccCCCCCCCCCccCcceecCCC
Q 046451 290 ICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDG----KIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPA 365 (719)
Q Consensus 290 ~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg----~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~ 365 (719)
.++|+.+|+....-+...+-|+.+.||+++ ++||-+--+| .|++||+.+++........-.+ .+
T Consensus 426 ~vididngnv~~idkS~~~lItdf~~~~ns-r~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~D---fs-------- 493 (668)
T COG4946 426 WVIDIDNGNVRLIDKSEYGLITDFDWHPNS-RWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYD---FS-------- 493 (668)
T ss_pred EEEEecCCCeeEecccccceeEEEEEcCCc-eeEEEecCcceeeeeEEEEecCCCeEEEecCCcccc---cC--------
Confidence 999999998766666677889999999999 7888765554 7999999999987633222111 22
Q ss_pred ceeeeeCCcEEEEccC
Q 046451 366 GASFGFGGKLVSFHPK 381 (719)
Q Consensus 366 ~~s~s~~Gklv~~~~~ 381 (719)
-+|.+||+++.|-..
T Consensus 494 -PaFD~d~ryLYfLs~ 508 (668)
T COG4946 494 -PAFDPDGRYLYFLSA 508 (668)
T ss_pred -cccCCCCcEEEEEec
Confidence 378999998877654
No 276
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.10 E-value=3.9e-10 Score=131.51 Aligned_cols=200 Identities=18% Similarity=0.395 Sum_probs=154.1
Q ss_pred ccccccCccceEEEcCCCCeEEEeeccceeeccc-CCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCC
Q 046451 2 ACIKGINRSASVAFAPDAPYMAAGTMAGAVDLSF-SSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSE 80 (719)
Q Consensus 2 ~~l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~-s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~ 80 (719)
+-.++++.|.++.=+|...+-+||+.||.|++|. +....+.+|+.. ...+|+.+.|+..|
T Consensus 2203 ~~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~---------------g~s~vtr~~f~~qG---- 2263 (2439)
T KOG1064|consen 2203 MIKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTA---------------GNSRVTRSRFNHQG---- 2263 (2439)
T ss_pred EeecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeecc---------------CcchhhhhhhcccC----
Confidence 3456778899999999999999999999886643 333444455433 23788899999998
Q ss_pred CCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEe---CCCcEEEEcCCCCC
Q 046451 81 DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA---DDGEICIWDLSAPA 157 (719)
Q Consensus 81 ~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs---~dg~I~iwdl~~~~ 157 (719)
+.+..+..||.+.+|.+. . +.....+.|+....++.|.. ..+++++ .++.+.+||..-..
T Consensus 2264 ----nk~~i~d~dg~l~l~q~~-------p---k~~~s~qchnk~~~Df~Fi~---s~~~tag~s~d~~n~~lwDtl~~~ 2326 (2439)
T KOG1064|consen 2264 ----NKFGIVDGDGDLSLWQAS-------P---KPYTSWQCHNKALSDFRFIG---SLLATAGRSSDNRNVCLWDTLLPP 2326 (2439)
T ss_pred ----CceeeeccCCceeecccC-------C---cceeccccCCccccceeeee---hhhhccccCCCCCcccchhcccCc
Confidence 688888899999999983 2 66677788999999999964 5677664 57899999976554
Q ss_pred CCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEe
Q 046451 158 EPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVAS 237 (719)
Q Consensus 158 ~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s 237 (719)
....+ ...|.+.++++++-|+. .+|++|+.+|.|++||++..+.+.++.. ++ .+.+|++++
T Consensus 2327 ~~s~v------~~~H~~gaT~l~~~P~~-qllisggr~G~v~l~D~rqrql~h~~~~----------~~--~~~~f~~~s 2387 (2439)
T KOG1064|consen 2327 MNSLV------HTCHDGGATVLAYAPKH-QLLISGGRKGEVCLFDIRQRQLRHTFQA----------LD--TREYFVTGS 2387 (2439)
T ss_pred cccee------eeecCCCceEEEEcCcc-eEEEecCCcCcEEEeehHHHHHHHHhhh----------hh--hhheeeccC
Confidence 43332 25688999999999995 5999999999999999999888887771 44 345789999
Q ss_pred CCCCCCcEEEEecCCCCCceEEe
Q 046451 238 DEDSSPALRLWDMRNTMSPVKEF 260 (719)
Q Consensus 238 ~d~~~~~I~lwDl~~~~~~~~~~ 260 (719)
..| .|+||++... ..++++
T Consensus 2388 s~g---~ikIw~~s~~-~ll~~~ 2406 (2439)
T KOG1064|consen 2388 SEG---NIKIWRLSEF-GLLHTF 2406 (2439)
T ss_pred ccc---ceEEEEcccc-chhhcC
Confidence 888 8999999754 344444
No 277
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.07 E-value=4.6e-10 Score=120.58 Aligned_cols=252 Identities=21% Similarity=0.306 Sum_probs=173.0
Q ss_pred ccceEEEcCCC--CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 9 RSASVAFAPDA--PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 9 ~V~~vafSpdg--~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
.|..+.||+.. .+-++.+.. ..-.||++....... +.+ -..+|...|+++.|++... .+
T Consensus 69 ~vad~qws~h~a~~~wiVsts~----------qkaiiwnlA~ss~~a-Ief-~lhghsraitd~n~~~q~p-------dV 129 (1081)
T KOG0309|consen 69 QVADVQWSPHPAKPYWIVSTSN----------QKAIIWNLAKSSSNA-IEF-VLHGHSRAITDINFNPQHP-------DV 129 (1081)
T ss_pred hhcceecccCCCCceeEEecCc----------chhhhhhhhcCCccc-eEE-EEecCccceeccccCCCCC-------cc
Confidence 36778888865 344444322 222478877544332 222 2367999999999999865 79
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCcc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~ 166 (719)
|++++.|-.+..||+.+.. ..+..+..-......++|+-.+++.||+ +....|+|||++.+...... ++
T Consensus 130 latcsvdt~vh~wd~rSp~--------~p~ys~~~w~s~asqVkwnyk~p~vlas-shg~~i~vwd~r~gs~pl~s--~K 198 (1081)
T KOG0309|consen 130 LATCSVDTYVHAWDMRSPH--------RPFYSTSSWRSAASQVKWNYKDPNVLAS-SHGNDIFVWDLRKGSTPLCS--LK 198 (1081)
T ss_pred eeeccccccceeeeccCCC--------cceeeeecccccCceeeecccCcchhhh-ccCCceEEEeccCCCcceEE--ec
Confidence 9999999999999995321 4444444444566789999877776665 45578999999988765432 33
Q ss_pred CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEE
Q 046451 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALR 246 (719)
Q Consensus 167 ~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~ 246 (719)
+|...|+.++|+..-...+.+++.||+|+.||..+..............|..-.+.|-|+.+++.-...++ .+.
T Consensus 199 ----~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n--~v~ 272 (1081)
T KOG0309|consen 199 ----GHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGN--MVP 272 (1081)
T ss_pred ----ccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCceeEeccccCCe--eee
Confidence 36778899999876556789999999999999986543333222356667777777766554443333321 333
Q ss_pred ---------EEecCCCCCceEEeeCCCCCeeEEEeCCC---------CCCeEEEEeCCCcEEEEECCC
Q 046451 247 ---------LWDMRNTMSPVKEFVGHTKGVIAMSWCPN---------DSSYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 247 ---------lwDl~~~~~~~~~~~~h~~~V~~v~~sp~---------d~~~l~sgs~Dg~I~iwd~~~ 296 (719)
.|+..+...++++|.||.+.|..+.|-.. ....|+|-+.|..+++|-+.+
T Consensus 273 ~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 273 QLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS 340 (1081)
T ss_pred eccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence 35555566789999999999988777531 123699999999999998753
No 278
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=99.06 E-value=2.9e-09 Score=101.69 Aligned_cols=209 Identities=15% Similarity=0.181 Sum_probs=128.2
Q ss_pred ceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccC---CCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEe
Q 046451 67 FNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISS---GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA 143 (719)
Q Consensus 67 V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~---~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs 143 (719)
|..+.++-+ ..|+++..++.+..+........ +...+....+.+..|.+.-.+-..+- -++.++++.
T Consensus 39 ~~~~~~v~~---------~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~-~~t~V~~~~ 108 (319)
T KOG4714|consen 39 LSKVSLSAE---------YILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTM-TDNRVCIGY 108 (319)
T ss_pred EEEeechhh---------heeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccc-cCCceEecC
Confidence 555666554 46777666655544443110000 01111133444444554333333332 457899999
Q ss_pred CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe-----CCCcEEEEECCCCceeEEecCCCCC
Q 046451 144 DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS-----YNGTTVVWDLKKQKPVISFSESIKR 218 (719)
Q Consensus 144 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s-----~dg~I~iwd~~~~~~~~~~~~~~~~ 218 (719)
.||.+.+++.+....... .....|. ...+.++...+ +++.++. .-+..++|+++..+....-. ....
T Consensus 109 ~dg~~~v~s~~~~~~~~~-----~i~~~~~-~~as~~~~~~~-~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~-~~~~ 180 (319)
T KOG4714|consen 109 ADGSLAVFSTDKDLALMS-----RIPSIHS-GSASRKICRHG-NSILSGGCGNWNAQDNFYANTLDPIKTLIPSK-KALD 180 (319)
T ss_pred CCceEEEEechHHHhhhh-----hcccccc-cccccceeecc-cEEecCCcceEeeccceeeecccccccccccc-cccc
Confidence 999999999876222111 0001111 11222333333 2333321 22345667666443322222 2334
Q ss_pred ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC
Q 046451 219 RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 219 ~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~ 296 (719)
.+.+++-+|...+++++|++++ .+.+||.|+...+...+..|+..|+.+-|+|.++..|+++++||.+..||..+
T Consensus 181 ~v~~l~~hp~qq~~v~cgt~dg---~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 181 AVTALCSHPAQQHLVCCGTDDG---IVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred cchhhhCCcccccEEEEecCCC---eEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 4999999999888888888887 99999999987778888999999999999999999999999999999999864
No 279
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.05 E-value=1.3e-07 Score=102.53 Aligned_cols=259 Identities=14% Similarity=0.065 Sum_probs=148.5
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEE-EEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRG-LEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~-l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
+.++.++.+|.|..+|. .++ +.+...... +.+.+ ... .++.++.++.+|.|+.||.++++....+.
T Consensus 106 ~~v~v~~~~g~l~ald~------~tG---~~~W~~~~~-~~~~~~p~v---~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 172 (377)
T TIGR03300 106 GLVFVGTEKGEVIALDA------EDG---KELWRAKLS-SEVLSPPLV---ANGLVVVRTNDGRLTALDAATGERLWTYS 172 (377)
T ss_pred CEEEEEcCCCEEEEEEC------CCC---cEeeeeccC-ceeecCCEE---ECCEEEEECCCCeEEEEEcCCCceeeEEc
Confidence 57888888999999998 445 444443322 22222 122 23567778889999999999888654431
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCC---c------e-eEEEECCCCCcEE
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR---R------C-SVLQWNPDVATQL 233 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~---~------i-~~l~~sp~g~~~l 233 (719)
.... ....... .+.... + ..++.+..+|.+..+|.++++.+.+....... . + ....+. + ..+
T Consensus 173 ~~~~-~~~~~~~-~sp~~~-~--~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~--~-~~v 244 (377)
T TIGR03300 173 RVTP-ALTLRGS-ASPVIA-D--GGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVD--G-GQV 244 (377)
T ss_pred cCCC-ceeecCC-CCCEEE-C--CEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEE--C-CEE
Confidence 1000 0000000 111111 2 26777888899999999999877654321110 0 0 111122 2 245
Q ss_pred EEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCC-CCCeEE
Q 046451 234 VVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAG-TNWNFD 312 (719)
Q Consensus 234 ~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h-~~~v~~ 312 (719)
++++.++ .++.||.+++ +.+-.... ........ ++..|++++.||.|..+|..+|+.+.+.... ......
T Consensus 245 y~~~~~g---~l~a~d~~tG-~~~W~~~~--~~~~~p~~---~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ss 315 (377)
T TIGR03300 245 YAVSYQG---RVAALDLRSG-RVLWKRDA--SSYQGPAV---DDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTA 315 (377)
T ss_pred EEEEcCC---EEEEEECCCC-cEEEeecc--CCccCceE---eCCEEEEECCCCeEEEEECCCCcEEEccccccCCcccc
Confidence 6666666 7999999876 33332221 11222222 4567888889999999999999988766322 122222
Q ss_pred eEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEE
Q 046451 313 IHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSF 378 (719)
Q Consensus 313 l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~ 378 (719)
... .+ ..|++++.||.|+++|..+++........-. .....|..... ..+..+.||++++|
T Consensus 316 p~i--~g-~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~-~~~~sp~~~~~-~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 316 PAV--VG-GYLVVGDFEGYLHWLSREDGSFVARLKTDGS-GIASPPVVVGD-GLLVQTRDGDLYAF 376 (377)
T ss_pred CEE--EC-CEEEEEeCCCEEEEEECCCCCEEEEEEcCCC-ccccCCEEECC-EEEEEeCCceEEEe
Confidence 223 23 4788888999999999999888653221100 01123322222 33455667777766
No 280
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=99.03 E-value=5.7e-08 Score=93.38 Aligned_cols=234 Identities=12% Similarity=0.058 Sum_probs=157.0
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
.+|+.|+..|.+.+|...+ .. ...+....|...|.-+.=..+....+..++.|.++++.+++.+.....+
T Consensus 85 ~~la~gG~~g~fd~~~~~t-----n~---~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~-- 154 (344)
T KOG4532|consen 85 VTLADGGASGQFDLFACNT-----ND---GHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAV-- 154 (344)
T ss_pred cEEEeccccceeeeecccC-----cc---cceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCccccee--
Confidence 6899999999999999842 11 3334444454444322222212345677888999999888765543221
Q ss_pred ccCCCCCCCC--CeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc--eeEEecCCCCCceeEEEECCCCCcEEEEEeCCC
Q 046451 165 LRGNGSAAQG--EISFVSWNSKVQHILASTSYNGTTVVWDLKKQK--PVISFSESIKRRCSVLQWNPDVATQLVVASDED 240 (719)
Q Consensus 165 l~~~~~~h~~--~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~ 240 (719)
|.. .+.++++++++ .++++.+....|..|.+.... .+..........-.+..|+... ..++++..|+
T Consensus 155 -------h~~~~~~ns~~~snd~-~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~-~~FAv~~Qdg 225 (344)
T KOG4532|consen 155 -------HNQNLTQNSLHYSNDP-SWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSEND-LQFAVVFQDG 225 (344)
T ss_pred -------eccccceeeeEEcCCC-ceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCc-ceEEEEecCC
Confidence 222 37889999997 588888888999999987642 2222222455566778899886 6899999998
Q ss_pred CCCcEEEEecCCCCCceEEe----eCCCCCeeEEEeCCCCC--CeEEEEeCCCcEEEEECCCCeEEEEecC-------CC
Q 046451 241 SSPALRLWDMRNTMSPVKEF----VGHTKGVIAMSWCPNDS--SYLLTCAKDNRTICWDTVSGEIVSELPA-------GT 307 (719)
Q Consensus 241 ~~~~I~lwDl~~~~~~~~~~----~~h~~~V~~v~~sp~d~--~~l~sgs~Dg~I~iwd~~~~~~~~~l~~-------h~ 307 (719)
++.|||+|....+..+. ..|.+.+..+.|++ .| ++|+..-.-+.+.+.|+++++....+.- |.
T Consensus 226 ---~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl-~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~ 301 (344)
T KOG4532|consen 226 ---TCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSL-YGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHN 301 (344)
T ss_pred ---cEEEEEecccccchhhhcccCCCCCCceEEEEecC-CCcceEEEEecCcceEEEEEcccCceeeEEecCcccccccc
Confidence 99999999876665443 35889999999997 44 4666666678999999999875544432 22
Q ss_pred -CCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 308 -NWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 308 -~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
..|+.-.|+.+++ -+.+.+++ .+.=|++.+.+..
T Consensus 302 tq~ifgt~f~~~n~-s~~v~~e~-~~ae~ni~srsR~ 336 (344)
T KOG4532|consen 302 TQHIFGTNFNNENE-SNDVKNEL-QGAEYNILSRSRF 336 (344)
T ss_pred ccccccccccCCCc-ccccccch-hhheeecccccee
Confidence 3478888888874 33333322 4555666665543
No 281
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=99.03 E-value=6e-09 Score=105.68 Aligned_cols=165 Identities=16% Similarity=0.140 Sum_probs=114.5
Q ss_pred cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 10 SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 10 V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
...+.+++++++||++..+... .++++..... ..++.....-...-+.+.|..+. ..+..
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~----------~~f~~~~~~~--~~kl~~~~~v~~~~~ai~~~~~~--------~sv~v 124 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQR----------AVFDYRENPK--GAKLLDVSCVPKRPTAISFIRED--------TSVLV 124 (390)
T ss_pred ccccccCCCceEEEEEeCCCce----------EEEEEecCCC--cceeeeEeecccCcceeeeeecc--------ceEEE
Confidence 4567789999999999755543 4555554433 22222222334445566666554 23444
Q ss_pred EcCCC---cEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCcc
Q 046451 90 GLVDG---SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166 (719)
Q Consensus 90 gs~dg---~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~ 166 (719)
+..-| .+.+|+.. + .....+-+|-..+++++|++ |+++|+++..|+.|+|-.......+..|
T Consensus 125 ~dkagD~~~~di~s~~------~----~~~~~~lGhvSml~dVavS~-D~~~IitaDRDEkIRvs~ypa~f~Iesf---- 189 (390)
T KOG3914|consen 125 ADKAGDVYSFDILSAD------S----GRCEPILGHVSMLLDVAVSP-DDQFIITADRDEKIRVSRYPATFVIESF---- 189 (390)
T ss_pred EeecCCceeeeeeccc------c----cCcchhhhhhhhhheeeecC-CCCEEEEecCCceEEEEecCcccchhhh----
Confidence 43344 44555542 1 23344567999999999999 7799999999999999887765554443
Q ss_pred CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec
Q 046451 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS 213 (719)
Q Consensus 167 ~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~ 213 (719)
..+|+..|..++.-++ ..|++++.|++|++||+++++.+.++.
T Consensus 190 --clGH~eFVS~isl~~~--~~LlS~sGD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 190 --CLGHKEFVSTISLTDN--YLLLSGSGDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred --ccccHhheeeeeeccC--ceeeecCCCCcEEEEecccCCcccccc
Confidence 3468889999999887 479999999999999999999887665
No 282
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.02 E-value=2e-07 Score=101.57 Aligned_cols=200 Identities=10% Similarity=0.050 Sum_probs=124.1
Q ss_pred CEEEEEEeCCCCC-EEEEEeC---CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC--CcE
Q 046451 125 PVRGLEFNSFTPN-LLASGAD---DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN--GTT 198 (719)
Q Consensus 125 ~V~~l~fsp~~~~-~lasgs~---dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d--g~I 198 (719)
.+....|+| +++ .++..+. +..|+++|+.+++..... ...+......|+|+|..++++.+.+ ..|
T Consensus 189 ~~~~p~wSp-DG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt--------~~~g~~~~~~~SPDG~~la~~~~~~g~~~I 259 (419)
T PRK04043 189 LNIFPKWAN-KEQTAFYYTSYGERKPTLYKYNLYTGKKEKIA--------SSQGMLVVSDVSKDGSKLLLTMAPKGQPDI 259 (419)
T ss_pred CeEeEEECC-CCCcEEEEEEccCCCCEEEEEECCCCcEEEEe--------cCCCcEEeeEECCCCCEEEEEEccCCCcEE
Confidence 778899999 566 3554433 356999999877543221 1233556788999997666666544 468
Q ss_pred EEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCC
Q 046451 199 VVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS 278 (719)
Q Consensus 199 ~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~ 278 (719)
+++|+.+++. ..+. .+........|+|||+.++++....+ ...|+++|+.++.....++.+. ....|+| |++
T Consensus 260 y~~dl~~g~~-~~LT-~~~~~d~~p~~SPDG~~I~F~Sdr~g-~~~Iy~~dl~~g~~~rlt~~g~----~~~~~SP-DG~ 331 (419)
T PRK04043 260 YLYDTNTKTL-TQIT-NYPGIDVNGNFVEDDKRIVFVSDRLG-YPNIFMKKLNSGSVEQVVFHGK----NNSSVST-YKN 331 (419)
T ss_pred EEEECCCCcE-EEcc-cCCCccCccEECCCCCEEEEEECCCC-CceEEEEECCCCCeEeCccCCC----cCceECC-CCC
Confidence 8889887763 3343 23333445689999976666554433 3478888987653212222221 2348999 888
Q ss_pred eEEEEeCC---------CcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCC--cEEEEeCCCCccc
Q 046451 279 YLLTCAKD---------NRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDG--KIGIYNIEGCSRY 343 (719)
Q Consensus 279 ~l~sgs~D---------g~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg--~I~iwd~~~~~~~ 343 (719)
+|+..+.. ..|.+.|+.+++.. .+.... ......|+|||..++++....+ .|.+.+++.....
T Consensus 332 ~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~-~LT~~~-~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~~~~ 405 (419)
T PRK04043 332 YIVYSSRETNNEFGKNTFNLYLISTNSDYIR-RLTANG-VNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYNKSF 405 (419)
T ss_pred EEEEEEcCCCcccCCCCcEEEEEECCCCCeE-ECCCCC-CcCCeEECCCCCEEEEEEccCCcEEEEEEecCCCeeE
Confidence 77666543 36888899887653 343332 2346899999955555544333 4677777765443
No 283
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.99 E-value=1.2e-06 Score=103.74 Aligned_cols=254 Identities=13% Similarity=0.207 Sum_probs=163.9
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasg 142 (719)
....|.++.|..+. ..|+.+..+|.|.++..+.. ... ..+.....-...|.+++||| |..+|+..
T Consensus 74 ~~~~ivs~~yl~d~--------~~l~~~~~~Gdi~~~~~~~~---~~~---~~~E~VG~vd~GI~a~~WSP-D~Ella~v 138 (928)
T PF04762_consen 74 PNDKIVSFQYLADS--------ESLCIALASGDIILVREDPD---PDE---DEIEIVGSVDSGILAASWSP-DEELLALV 138 (928)
T ss_pred CCCcEEEEEeccCC--------CcEEEEECCceEEEEEccCC---CCC---ceeEEEEEEcCcEEEEEECC-CcCEEEEE
Confidence 45789999999987 68899999999999932110 111 33344444567899999999 88999999
Q ss_pred eCCCcEEEEcCC---------------C--------CCCCCccC--------------Cc----cCCCCCCCCCeEEEEe
Q 046451 143 ADDGEICIWDLS---------------A--------PAEPSHFP--------------PL----RGNGSAAQGEISFVSW 181 (719)
Q Consensus 143 s~dg~I~iwdl~---------------~--------~~~~~~~~--------------~l----~~~~~~h~~~I~~l~~ 181 (719)
+.+++|.+.+.. . ++....|. .. .+... ..+.-..|+|
T Consensus 139 T~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISW 217 (928)
T PF04762_consen 139 TGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISW 217 (928)
T ss_pred eCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEE
Confidence 999988876421 0 00111110 00 01111 3345668999
Q ss_pred cCCCCcEEEEEeC---C---CcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC
Q 046451 182 NSKVQHILASTSY---N---GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255 (719)
Q Consensus 182 sp~g~~~l~s~s~---d---g~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~ 255 (719)
-.||. +|++.+. + ..++||+-+ |....+-. ...+--.+++|-|.| .+|++.....+...|.+|.-+..+.
T Consensus 218 RGDG~-yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE-~v~gLe~~l~WrPsG-~lIA~~q~~~~~~~VvFfErNGLrh 293 (928)
T PF04762_consen 218 RGDGE-YFAVSSVEPETGSRRVIRVYSRE-GELQSTSE-PVDGLEGALSWRPSG-NLIASSQRLPDRHDVVFFERNGLRH 293 (928)
T ss_pred CCCCc-EEEEEEEEcCCCceeEEEEECCC-ceEEeccc-cCCCccCCccCCCCC-CEEEEEEEcCCCcEEEEEecCCcEe
Confidence 99985 7776654 2 478999865 55433333 444555678999999 4677766543334678887432211
Q ss_pred ceEEee--CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe--EEEEecCC-CCCeEEeEEcCCCCCEEEEEeCCC
Q 046451 256 PVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE--IVSELPAG-TNWNFDIHWYPKIPGVISASSFDG 330 (719)
Q Consensus 256 ~~~~~~--~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~--~~~~l~~h-~~~v~~l~~spdg~~~las~s~Dg 330 (719)
--..+. .....|..+.|+. |+.+|+..-.|. |.+|-..+.. +.+++... ...+..+.|++..+..|...+.+|
T Consensus 294 geF~l~~~~~~~~v~~l~Wn~-ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g 371 (928)
T PF04762_consen 294 GEFTLRFDPEEEKVIELAWNS-DSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNG 371 (928)
T ss_pred eeEecCCCCCCceeeEEEECC-CCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCC
Confidence 111222 3456899999999 999999977665 9999887754 23333322 223555999999888888888778
Q ss_pred cEEEEeCC
Q 046451 331 KIGIYNIE 338 (719)
Q Consensus 331 ~I~iwd~~ 338 (719)
.+.++++.
T Consensus 372 ~~~~~~~~ 379 (928)
T PF04762_consen 372 QYEIYDFA 379 (928)
T ss_pred cEEEEEEE
Confidence 77665543
No 284
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.97 E-value=3e-07 Score=110.95 Aligned_cols=208 Identities=13% Similarity=0.139 Sum_probs=133.3
Q ss_pred CceeeeecCCCCCCCCCccceE-EEEcCCCcEEEEcCCccccCCCCCCCCceeeecc-----------------ccCCEE
Q 046451 66 RFNRLAWGKNGSGSEDFSLGLV-AGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR-----------------HKGPVR 127 (719)
Q Consensus 66 ~V~~l~~sp~g~~~~~~~~~~l-asgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~-----------------h~~~V~ 127 (719)
....|++.+++ +.| ++-..++.|+++|+.+ ..+.++.+ .-..-.
T Consensus 625 ~P~GIavd~~g--------n~LYVaDt~n~~Ir~id~~~----------~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~ 686 (1057)
T PLN02919 625 RPQGLAYNAKK--------NLLYVADTENHALREIDFVN----------ETVRTLAGNGTKGSDYQGGKKGTSQVLNSPW 686 (1057)
T ss_pred CCcEEEEeCCC--------CEEEEEeCCCceEEEEecCC----------CEEEEEeccCcccCCCCCChhhhHhhcCCCe
Confidence 35788898876 444 4444567899998743 12222211 011235
Q ss_pred EEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC------CccCCC--CCCCCCeEEEEecCCCCcEEEEEeCCCcEE
Q 046451 128 GLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP------PLRGNG--SAAQGEISFVSWNSKVQHILASTSYNGTTV 199 (719)
Q Consensus 128 ~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~------~l~~~~--~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~ 199 (719)
+++|+++++.++++.+.++.|++||..++... .+. ...+.. ...-.....|+|++++..++++-+.++.|+
T Consensus 687 gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Ir 765 (1057)
T PLN02919 687 DVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIR 765 (1057)
T ss_pred EEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEE
Confidence 79999866677788888899999998765321 100 000000 001124567999999866777777889999
Q ss_pred EEECCCCceeEEec-----------CC---------CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEE
Q 046451 200 VWDLKKQKPVISFS-----------ES---------IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE 259 (719)
Q Consensus 200 iwd~~~~~~~~~~~-----------~~---------~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~ 259 (719)
+||+.++....... .+ .-.....++|+++|. ++++...++ .|++||..+. . +.+
T Consensus 766 v~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~-LYVADs~N~---rIrviD~~tg-~-v~t 839 (1057)
T PLN02919 766 ALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ-IYVADSYNH---KIKKLDPATK-R-VTT 839 (1057)
T ss_pred EEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc-EEEEECCCC---EEEEEECCCC-e-EEE
Confidence 99998765321110 00 011346889999984 666666665 8999998754 2 222
Q ss_pred eeC--------------CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE
Q 046451 260 FVG--------------HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI 299 (719)
Q Consensus 260 ~~~--------------h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~ 299 (719)
+.+ .-.....|++++ +++++++.+.+++|++||+.+++.
T Consensus 840 iaG~G~~G~~dG~~~~a~l~~P~GIavd~-dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 840 LAGTGKAGFKDGKALKAQLSEPAGLALGE-NGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred EeccCCcCCCCCcccccccCCceEEEEeC-CCCEEEEECCCCEEEEEECCCCcc
Confidence 222 123567899999 888888889999999999998765
No 285
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.97 E-value=3e-07 Score=90.08 Aligned_cols=249 Identities=14% Similarity=0.116 Sum_probs=136.0
Q ss_pred eEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEc
Q 046451 12 SVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGL 91 (719)
Q Consensus 12 ~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs 91 (719)
.++.+.||++||+- .+..|+|-....+-....-++.-..+..-.-..++||+|+ .+||.+.
T Consensus 2 ~~~~~~~Gk~lAi~-----------qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~--------tlLa~a~ 62 (282)
T PF15492_consen 2 HLALSSDGKLLAIL-----------QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDC--------TLLAYAE 62 (282)
T ss_pred ceeecCCCcEEEEE-----------eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCC--------cEEEEEc
Confidence 46788999999987 3444555443321111111111122334456789999998 7999999
Q ss_pred CCCcEEEEcCCccccCCCCCCCCceeeec-------cccCCEEEEEEeCCC-----CCEEEEEeCCCcEEEEcCCCC--C
Q 046451 92 VDGSIDIWNPLSLISSGETGGNPLIAHLS-------RHKGPVRGLEFNSFT-----PNLLASGADDGEICIWDLSAP--A 157 (719)
Q Consensus 92 ~dg~I~lwd~~~~~~~~~~~~~~~~~~l~-------~h~~~V~~l~fsp~~-----~~~lasgs~dg~I~iwdl~~~--~ 157 (719)
..|+|+++|+.. ..+..+. .-...|.++.|.... ...|++-..+|.++=|-+..+ +
T Consensus 63 S~G~i~vfdl~g----------~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q 132 (282)
T PF15492_consen 63 STGTIRVFDLMG----------SELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQ 132 (282)
T ss_pred CCCeEEEEeccc----------ceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCC
Confidence 999999999852 1111111 134577777776522 225666777788877765322 2
Q ss_pred CCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC-CCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEE-E
Q 046451 158 EPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY-NGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLV-V 235 (719)
Q Consensus 158 ~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~-dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~-~ 235 (719)
.-.....+.. ...+...|.++.|++..+ +|++|+. ...-..+. .....+++-..-.+..++.. +
T Consensus 133 ~y~e~hsfsf-~~~yp~Gi~~~vy~p~h~-LLlVgG~~~~~~~~s~------------a~~~GLtaWRiL~~~Pyyk~v~ 198 (282)
T PF15492_consen 133 GYQENHSFSF-SSHYPHGINSAVYHPKHR-LLLVGGCEQNQDGMSK------------ASSCGLTAWRILSDSPYYKQVT 198 (282)
T ss_pred cceeeEEEEe-cccCCCceeEEEEcCCCC-EEEEeccCCCCCcccc------------ccccCceEEEEcCCCCcEEEcc
Confidence 1111100111 122355899999999864 5555543 32100000 12222333332222222222 2
Q ss_pred EeCCCCC---CcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC
Q 046451 236 ASDEDSS---PALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA 305 (719)
Q Consensus 236 ~s~d~~~---~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~ 305 (719)
...++-. .+..+|.+-+. ............|..|..|| |+.+|++...+|.|.+|++-+-+...+..-
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~-~~fs~~~~~~d~i~kmSlSP-dg~~La~ih~sG~lsLW~iPsL~~~~~W~~ 269 (282)
T PF15492_consen 199 SSEDDITASSKRRGLLRIPSF-KFFSRQGQEQDGIFKMSLSP-DGSLLACIHFSGSLSLWEIPSLRLQRSWKQ 269 (282)
T ss_pred ccCccccccccccceeeccce-eeeeccccCCCceEEEEECC-CCCEEEEEEcCCeEEEEecCcchhhcccch
Confidence 2222200 01223332211 00111122457899999999 999999999999999999988777666543
No 286
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.96 E-value=2.3e-07 Score=95.66 Aligned_cols=148 Identities=11% Similarity=0.112 Sum_probs=112.6
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCC-cEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDG-SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg-~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
.++..+|.-..+..++ .-++.|..|| .+-|+|.+. ...+.+...-+.|..+..++ +++++
T Consensus 356 v~~~~~VrY~r~~~~~--------e~~vigt~dgD~l~iyd~~~----------~e~kr~e~~lg~I~av~vs~-dGK~~ 416 (668)
T COG4946 356 VGKKGGVRYRRIQVDP--------EGDVIGTNDGDKLGIYDKDG----------GEVKRIEKDLGNIEAVKVSP-DGKKV 416 (668)
T ss_pred cCCCCceEEEEEccCC--------cceEEeccCCceEEEEecCC----------ceEEEeeCCccceEEEEEcC-CCcEE
Confidence 4567778888887776 4688888888 899999732 55677777888999999999 89999
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC----cEEEEECCCCceeEEecCC
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG----TTVVWDLKKQKPVISFSES 215 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg----~I~iwd~~~~~~~~~~~~~ 215 (719)
+.+.....|.++|++++..... .....+-|+.+.|++++ ++|+-+--+| .|+++|+.+++......
T Consensus 417 vvaNdr~el~vididngnv~~i-------dkS~~~lItdf~~~~ns-r~iAYafP~gy~tq~Iklydm~~~Kiy~vTT-- 486 (668)
T COG4946 417 VVANDRFELWVIDIDNGNVRLI-------DKSEYGLITDFDWHPNS-RWIAYAFPEGYYTQSIKLYDMDGGKIYDVTT-- 486 (668)
T ss_pred EEEcCceEEEEEEecCCCeeEe-------cccccceeEEEEEcCCc-eeEEEecCcceeeeeEEEEecCCCeEEEecC--
Confidence 9999999999999999875322 22345689999999996 5888766554 68999999887655443
Q ss_pred CCCceeEEEECCCCCcEEEEEe
Q 046451 216 IKRRCSVLQWNPDVATQLVVAS 237 (719)
Q Consensus 216 ~~~~i~~l~~sp~g~~~l~~~s 237 (719)
....=.+-+|.+|++++...+.
T Consensus 487 ~ta~DfsPaFD~d~ryLYfLs~ 508 (668)
T COG4946 487 PTAYDFSPAFDPDGRYLYFLSA 508 (668)
T ss_pred CcccccCcccCCCCcEEEEEec
Confidence 3444456788999876655443
No 287
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.95 E-value=1.6e-07 Score=95.24 Aligned_cols=302 Identities=13% Similarity=0.121 Sum_probs=176.8
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecc-------cCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCC
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLS-------FSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSG 78 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~-------~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~ 78 (719)
|...-.++.+++..++|+.+.....+.+. +..-+ +++.+...-.... -...+...|.+++||+...
T Consensus 134 h~qk~f~v~r~~gcrli~y~~~~s~lv~sQks~qa~lpGvG-v~~l~~~~fkssq-----~lp~~g~~IrdlafSp~~~- 206 (463)
T KOG1645|consen 134 HKQKSFSVGRNAGCRLIGYDESSSTLVVSQKSGQALLPGVG-VQKLESHDFKSSQ-----ILPGEGSFIRDLAFSPFNE- 206 (463)
T ss_pred hcccceeeeecCCceEEecccccceeeeeccchhhcCCccc-eEEeccCCcchhh-----cccccchhhhhhccCcccc-
Confidence 55666677777777777666443333321 11112 3333322222211 1235677899999999864
Q ss_pred CCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC
Q 046451 79 SEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE 158 (719)
Q Consensus 79 ~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~ 158 (719)
++|..++.+..|+|.|++ +. .....+..| ..+++++|+-++.++|..|..+|.|.|||++..+.
T Consensus 207 ------GLl~~asl~nkiki~dle------t~---~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~~ 270 (463)
T KOG1645|consen 207 ------GLLGLASLGNKIKIMDLE------TS---CVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPEG 270 (463)
T ss_pred ------ceeeeeccCceEEEEecc------cc---eeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCCCc
Confidence 689999999999999994 33 455566666 78999999998888999999999999999987664
Q ss_pred CCccCCccCCCCCCCCCeEEEEe------cCCCCcEEEEEeCCCcEEEEECCCC--ceeEEecCCCCCceeEEEECCCCC
Q 046451 159 PSHFPPLRGNGSAAQGEISFVSW------NSKVQHILASTSYNGTTVVWDLKKQ--KPVISFSESIKRRCSVLQWNPDVA 230 (719)
Q Consensus 159 ~~~~~~l~~~~~~h~~~I~~l~~------sp~g~~~l~s~s~dg~I~iwd~~~~--~~~~~~~~~~~~~i~~l~~sp~g~ 230 (719)
.... +... .....|..++. .+.|+ +|+....+ +..|++.-. .....+.....+.+.++.+++..+
T Consensus 271 ~~~e--~~a~--~t~~pv~~i~~~~~n~~f~~gg-lLv~~lt~--l~f~ei~~s~~~~p~vlele~pG~cismqy~~~sn 343 (463)
T KOG1645|consen 271 PLME--LVAN--VTINPVHKIAPVQPNKIFTSGG-LLVFALTV--LQFYEIVFSAECLPCVLELEPPGICISMQYHGVSN 343 (463)
T ss_pred hHhh--hhhh--hccCcceeecccCccccccccc-eEEeeehh--hhhhhhhccccCCCcccccCCCcceeeeeecCccc
Confidence 3221 1110 01123333332 23332 45544443 455655432 222222223566777778887767
Q ss_pred cEEEEEeCCCCCCcEEEE----ecCCCCCceEEeeCCCC-C---e--eEEEeCCCCCCeEE-EEeCCCcEEEEECCCCeE
Q 046451 231 TQLVVASDEDSSPALRLW----DMRNTMSPVKEFVGHTK-G---V--IAMSWCPNDSSYLL-TCAKDNRTICWDTVSGEI 299 (719)
Q Consensus 231 ~~l~~~s~d~~~~~I~lw----Dl~~~~~~~~~~~~h~~-~---V--~~v~~sp~d~~~l~-sgs~Dg~I~iwd~~~~~~ 299 (719)
+++++...+.+..+++.. |.+++......-.++.+ . + +...+.+-+.++|+ +++..+.+.+||..+++.
T Consensus 344 h~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~D~~s~ev 423 (463)
T KOG1645|consen 344 HLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQDPHSFEV 423 (463)
T ss_pred eEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecCCcceeEEeccchhhe
Confidence 788887775543333332 11222111111111210 0 0 11112221445444 455668899999999999
Q ss_pred EEEecCCCCCeEEeEEcC-CCCCEEEEEeCCCcEEEEeCCC
Q 046451 300 VSELPAGTNWNFDIHWYP-KIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 300 ~~~l~~h~~~v~~l~~sp-dg~~~las~s~Dg~I~iwd~~~ 339 (719)
+.++... ..|.+++... ++..+|++-. |..++||..+.
T Consensus 424 vQ~l~~~-epv~Dicp~~~n~~syLa~LT-d~~v~Iyk~es 462 (463)
T KOG1645|consen 424 VQTLALS-EPVLDICPNDTNGSSYLALLT-DDRVHIYKNES 462 (463)
T ss_pred eeecccC-cceeecceeecCCcchhhhee-cceEEEEecCC
Confidence 9998665 5587776654 4445777766 77899998664
No 288
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.94 E-value=6.2e-09 Score=108.43 Aligned_cols=255 Identities=16% Similarity=0.217 Sum_probs=166.5
Q ss_pred ceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC
Q 046451 55 LLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF 134 (719)
Q Consensus 55 ~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~ 134 (719)
+.+....+|.+.|..++--.+. +-+++++.|.+|++|.+....+ +.+...+..++..|+..|.++.|..
T Consensus 726 irL~nf~GH~~~iRai~AidNE--------NSFiSASkDKTVKLWSik~EgD--~~~tsaCQfTY~aHkk~i~~igfL~- 794 (1034)
T KOG4190|consen 726 IRLCNFTGHQEKIRAIAAIDNE--------NSFISASKDKTVKLWSIKPEGD--EIGTSACQFTYQAHKKPIHDIGFLA- 794 (1034)
T ss_pred eeeecccCcHHHhHHHHhcccc--------cceeeccCCceEEEEEeccccC--ccccceeeeEhhhccCcccceeeee-
Confidence 3345566788888887655444 6899999999999999964321 1112247788899999999999988
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEE-EeCCCcEEEEECCCCceeEEec
Q 046451 135 TPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILAS-TSYNGTTVVWDLKKQKPVISFS 213 (719)
Q Consensus 135 ~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s-~s~dg~I~iwd~~~~~~~~~~~ 213 (719)
+.+++++ .||.|++||---+.....+ ......+..+.|.|+.-- + .++++. ++...+|+++|.+..+....+.
T Consensus 795 ~lr~i~S--cD~giHlWDPFigr~Laq~--~dapk~~a~~~ikcl~nv-~-~~iliAgcsaeSTVKl~DaRsce~~~E~k 868 (1034)
T KOG4190|consen 795 DLRSIAS--CDGGIHLWDPFIGRLLAQM--EDAPKEGAGGNIKCLENV-D-RHILIAGCSAESTVKLFDARSCEWTCELK 868 (1034)
T ss_pred ccceeee--ccCcceeecccccchhHhh--hcCcccCCCceeEecccC-c-chheeeeccchhhheeeecccccceeeEE
Confidence 6667764 5789999998766655432 222222223345554321 2 344444 4778999999999887665554
Q ss_pred C----CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcE
Q 046451 214 E----SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRT 289 (719)
Q Consensus 214 ~----~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I 289 (719)
. ....-+.+++..+.|. .++++-..| +|.+.|.|++ +.+............++ .| ....|+....|..+
T Consensus 869 Vcna~~Pna~~R~iaVa~~GN-~lAa~LSnG---ci~~LDaR~G-~vINswrpmecdllqla-ap-sdq~L~~saldHsl 941 (1034)
T KOG4190|consen 869 VCNAPGPNALTRAIAVADKGN-KLAAALSNG---CIAILDARNG-KVINSWRPMECDLLQLA-AP-SDQALAQSALDHSL 941 (1034)
T ss_pred eccCCCCchheeEEEeccCcc-hhhHHhcCC---cEEEEecCCC-ceeccCCcccchhhhhc-Cc-hhHHHHhhccccee
Confidence 3 3456788999999984 677777777 8999999986 44554443333333343 24 44677777888899
Q ss_pred EE-EECCCCeEEEEecCCCCCeEEeEEc-CCCCCEEEEEeCCCcEEEEeC
Q 046451 290 IC-WDTVSGEIVSELPAGTNWNFDIHWY-PKIPGVISASSFDGKIGIYNI 337 (719)
Q Consensus 290 ~i-wd~~~~~~~~~l~~h~~~v~~l~~s-pdg~~~las~s~Dg~I~iwd~ 337 (719)
.+ |..-+|......+...... .|- .-| --|++......+.+|.-
T Consensus 942 aVnWhaldgimh~q~kpppepa---hflqsvg-pSLV~a~~Gn~lgVYad 987 (1034)
T KOG4190|consen 942 AVNWHALDGIMHLQDKPPPEPA---HFLQSVG-PSLVTAQNGNILGVYAD 987 (1034)
T ss_pred EeeehhcCCeeeeccCCCCcch---hhhhccC-ceeEEeccCcEEEEEec
Confidence 88 9887776665554322211 111 123 34666665667777753
No 289
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=98.92 E-value=1.6e-07 Score=102.08 Aligned_cols=245 Identities=15% Similarity=0.213 Sum_probs=174.0
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC--------
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT-------- 135 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~-------- 135 (719)
...-.++.|++.| +||.|+. ..|.+.|. .+- +.+..+..|...|+.+.|.|..
T Consensus 15 ~sN~~A~Dw~~~G---------LiAygsh-slV~VVDs------~s~---q~iqsie~h~s~V~~VrWap~~~p~~llS~ 75 (1062)
T KOG1912|consen 15 RSNRNAADWSPSG---------LIAYGSH-SLVSVVDS------RSL---QLIQSIELHQSAVTSVRWAPAPSPRDLLSP 75 (1062)
T ss_pred cccccccccCccc---------eEEEecC-ceEEEEeh------hhh---hhhhccccCccceeEEEeccCCCchhccCc
Confidence 3446789999985 8888874 46778886 333 7888899999999999997631
Q ss_pred ---CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecC---CCCcEEEEEeCCCcEEEEECCCCcee
Q 046451 136 ---PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNS---KVQHILASTSYNGTTVVWDLKKQKPV 209 (719)
Q Consensus 136 ---~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp---~g~~~l~s~s~dg~I~iwd~~~~~~~ 209 (719)
.-+||++...|.|.+||.........+ ..+.+.+..++|-+ +...+|++-....+|.+|+..+|+..
T Consensus 76 ~~~~lliAsaD~~GrIil~d~~~~s~~~~l-------~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~ 148 (1062)
T KOG1912|consen 76 SSSQLLIASADISGRIILVDFVLASVINWL-------SHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKF 148 (1062)
T ss_pred cccceeEEeccccCcEEEEEehhhhhhhhh-------cCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCcee
Confidence 126788889999999999887765442 23556777888743 33367777788889999999999999
Q ss_pred EEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC---ceEEe---eCCCC------------------
Q 046451 210 ISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS---PVKEF---VGHTK------------------ 265 (719)
Q Consensus 210 ~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~---~~~~~---~~h~~------------------ 265 (719)
.... .......|+.++|-....++.-+..| .|.+-+.-...+ +.+.+ ..|.+
T Consensus 149 Wk~~-ys~~iLs~f~~DPfd~rh~~~l~s~g---~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~ 224 (1062)
T KOG1912|consen 149 WKYD-YSHEILSCFRVDPFDSRHFCVLGSKG---FVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTP 224 (1062)
T ss_pred eccc-cCCcceeeeeeCCCCcceEEEEccCc---eEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCC
Confidence 8887 45556677999997666666666666 565555432111 11111 12211
Q ss_pred -------CeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCC-CEEEEEeCCCcEEEEeC
Q 046451 266 -------GVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIP-GVISASSFDGKIGIYNI 337 (719)
Q Consensus 266 -------~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~-~~las~s~Dg~I~iwd~ 337 (719)
....++|+| .-+.++.......+.|+|++-..++..+.-..+.+.-+.|-|+.. ..|.+.-.||.+.||..
T Consensus 225 ~sa~fity~a~faf~p-~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvr 303 (1062)
T KOG1912|consen 225 ASAYFITYCAQFAFSP-HWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVR 303 (1062)
T ss_pred cchhHHHHHHhhhcCh-hhhceEEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEe
Confidence 012356788 444444455678899999988888888877777677788888763 47888888999999987
Q ss_pred CC
Q 046451 338 EG 339 (719)
Q Consensus 338 ~~ 339 (719)
..
T Consensus 304 k~ 305 (1062)
T KOG1912|consen 304 KE 305 (1062)
T ss_pred ec
Confidence 65
No 290
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.92 E-value=5.3e-07 Score=98.31 Aligned_cols=186 Identities=13% Similarity=0.058 Sum_probs=119.8
Q ss_pred CeEEEEecCCCCcEEEEEeC---CCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecC
Q 046451 175 EISFVSWNSKVQHILASTSY---NGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR 251 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~---dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~ 251 (719)
.+....|+++|+++++..+. +..|+++|+.+++...... ..+......|+|||+.++++...++ ...|+++|+.
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~--~~g~~~~~~~SPDG~~la~~~~~~g-~~~Iy~~dl~ 265 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS--SQGMLVVSDVSKDGSKLLLTMAPKG-QPDIYLYDTN 265 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec--CCCcEEeeEECCCCCEEEEEEccCC-CcEEEEEECC
Confidence 56789999998654554333 3579999998886554433 4555667889999977666665443 4578899986
Q ss_pred CCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe-CCC--cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeC
Q 046451 252 NTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA-KDN--RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSF 328 (719)
Q Consensus 252 ~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs-~Dg--~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~ 328 (719)
.+. .+.+..+........|+| ||+.|+..+ ..+ .|.++|+.+++....... ... ...|+|||..++++...
T Consensus 266 ~g~--~~~LT~~~~~d~~p~~SP-DG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~~--~~~~SPDG~~Ia~~~~~ 339 (419)
T PRK04043 266 TKT--LTQITNYPGIDVNGNFVE-DDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GKN--NSSVSTYKNYIVYSSRE 339 (419)
T ss_pred CCc--EEEcccCCCccCccEECC-CCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CCc--CceECCCCCEEEEEEcC
Confidence 642 344544443345668999 777666554 333 578889987776433322 111 24899999655555544
Q ss_pred C--------CcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCC
Q 046451 329 D--------GKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKS 382 (719)
Q Consensus 329 D--------g~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~ 382 (719)
+ ..|.+.|++++......... .....+|++||+.++|..+.
T Consensus 340 ~~~~~~~~~~~I~v~d~~~g~~~~LT~~~-------------~~~~p~~SPDG~~I~f~~~~ 388 (419)
T PRK04043 340 TNNEFGKNTFNLYLISTNSDYIRRLTANG-------------VNQFPRFSSDGGSIMFIKYL 388 (419)
T ss_pred CCcccCCCCcEEEEEECCCCCeEECCCCC-------------CcCCeEECCCCCEEEEEEcc
Confidence 3 36888898887654432211 11235789999999888654
No 291
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.91 E-value=8.8e-07 Score=89.96 Aligned_cols=225 Identities=14% Similarity=0.123 Sum_probs=144.4
Q ss_pred eeeecC-CCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCc
Q 046451 69 RLAWGK-NGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGE 147 (719)
Q Consensus 69 ~l~~sp-~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~ 147 (719)
++.|.+ ++ .++++-...+.|..|+... .....+... ....+.+...+ ..|+.+..+ .
T Consensus 4 gp~~d~~~g--------~l~~~D~~~~~i~~~~~~~----------~~~~~~~~~--~~~G~~~~~~~-g~l~v~~~~-~ 61 (246)
T PF08450_consen 4 GPVWDPRDG--------RLYWVDIPGGRIYRVDPDT----------GEVEVIDLP--GPNGMAFDRPD-GRLYVADSG-G 61 (246)
T ss_dssp EEEEETTTT--------EEEEEETTTTEEEEEETTT----------TEEEEEESS--SEEEEEEECTT-SEEEEEETT-C
T ss_pred ceEEECCCC--------EEEEEEcCCCEEEEEECCC----------CeEEEEecC--CCceEEEEccC-CEEEEEEcC-c
Confidence 577887 44 6777777889999999832 222222222 27788888425 555555554 4
Q ss_pred EEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC--------CcEEEEECCCCceeEEecCCCCCc
Q 046451 148 ICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN--------GTTVVWDLKKQKPVISFSESIKRR 219 (719)
Q Consensus 148 I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d--------g~I~iwd~~~~~~~~~~~~~~~~~ 219 (719)
+.++|+.+++....+. ... ........+++++.++|. ++++.... |.|+.++.. ++...... .-..
T Consensus 62 ~~~~d~~~g~~~~~~~-~~~-~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~--~~~~ 135 (246)
T PF08450_consen 62 IAVVDPDTGKVTVLAD-LPD-GGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD--GLGF 135 (246)
T ss_dssp EEEEETTTTEEEEEEE-EET-TCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE--EESS
T ss_pred eEEEecCCCcEEEEee-ccC-CCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-CeEEEEec--Cccc
Confidence 5666888765432221 100 111344788999999984 66665543 567778877 55444433 4566
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCce---EEe---eCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEE
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPV---KEF---VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~---~~~---~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd 293 (719)
.+.|+|+++++.++++-+..+ .|..||+......+ +.+ ....+..-.+++.. ++++.++.-..+.|.++|
T Consensus 136 pNGi~~s~dg~~lyv~ds~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~-~G~l~va~~~~~~I~~~~ 211 (246)
T PF08450_consen 136 PNGIAFSPDGKTLYVADSFNG---RIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDS-DGNLWVADWGGGRIVVFD 211 (246)
T ss_dssp EEEEEEETTSSEEEEEETTTT---EEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBT-TS-EEEEEETTTEEEEEE
T ss_pred ccceEECCcchheeecccccc---eeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcC-CCCEEEEEcCCCEEEEEC
Confidence 789999999976666666666 89999986543311 222 22222367899998 888888888899999999
Q ss_pred CCCCeEEEEecCCCCCeEEeEEc-CCCCCEEEEE
Q 046451 294 TVSGEIVSELPAGTNWNFDIHWY-PKIPGVISAS 326 (719)
Q Consensus 294 ~~~~~~~~~l~~h~~~v~~l~~s-pdg~~~las~ 326 (719)
.+ |+.+..+......+++++|. ++...+++|.
T Consensus 212 p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 212 PD-GKLLREIELPVPRPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp TT-SCEEEEEE-SSSSEEEEEEESTTSSEEEEEE
T ss_pred CC-ccEEEEEcCCCCCEEEEEEECCCCCEEEEEe
Confidence 86 99888887765689999994 5554555554
No 292
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.90 E-value=5.1e-07 Score=98.00 Aligned_cols=220 Identities=14% Similarity=0.072 Sum_probs=130.2
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCE-----EEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPV-----RGLEFNSFTPNLLASGADDGEICIWDLSAPAEP 159 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V-----~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~ 159 (719)
+.++.++.+|.|+.||. .++ +.+..+......+ .+..+. + ..++.+..+|.|..+|+.+++..
T Consensus 146 ~~v~v~~~~g~l~a~d~------~tG---~~~W~~~~~~~~~~~~~~~sp~~~--~-~~v~~~~~~g~v~ald~~tG~~~ 213 (377)
T TIGR03300 146 GLVVVRTNDGRLTALDA------ATG---ERLWTYSRVTPALTLRGSASPVIA--D-GGVLVGFAGGKLVALDLQTGQPL 213 (377)
T ss_pred CEEEEECCCCeEEEEEc------CCC---ceeeEEccCCCceeecCCCCCEEE--C-CEEEEECCCCEEEEEEccCCCEe
Confidence 46777788999999998 445 4444443322111 111221 2 46778888899999999888754
Q ss_pred CccCCccCCCCCCCC---Ce-EEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEE
Q 046451 160 SHFPPLRGNGSAAQG---EI-SFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVV 235 (719)
Q Consensus 160 ~~~~~l~~~~~~h~~---~I-~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~ 235 (719)
.....-......... .+ ....+. + ..+++++.+|.++.||.++++.+..... . ....... ++. .+++
T Consensus 214 W~~~~~~~~g~~~~~~~~~~~~~p~~~--~-~~vy~~~~~g~l~a~d~~tG~~~W~~~~--~-~~~~p~~--~~~-~vyv 284 (377)
T TIGR03300 214 WEQRVALPKGRTELERLVDVDGDPVVD--G-GQVYAVSYQGRVAALDLRSGRVLWKRDA--S-SYQGPAV--DDN-RLYV 284 (377)
T ss_pred eeeccccCCCCCchhhhhccCCccEEE--C-CEEEEEEcCCEEEEEECCCCcEEEeecc--C-CccCceE--eCC-EEEE
Confidence 332100000000000 00 111121 2 3677788899999999999988776651 1 1222222 232 4566
Q ss_pred EeCCCCCCcEEEEecCCCCCceEEeeCC-CCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeE-Ee
Q 046451 236 ASDEDSSPALRLWDMRNTMSPVKEFVGH-TKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNF-DI 313 (719)
Q Consensus 236 ~s~d~~~~~I~lwDl~~~~~~~~~~~~h-~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~-~l 313 (719)
++.++ .|+.+|..++. .+-..... .....+... .+.+|++++.||.|+++|..+|+.+.+++.+...+. +.
T Consensus 285 ~~~~G---~l~~~d~~tG~-~~W~~~~~~~~~~ssp~i---~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp 357 (377)
T TIGR03300 285 TDADG---VVVALDRRSGS-ELWKNDELKYRQLTAPAV---VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPP 357 (377)
T ss_pred ECCCC---eEEEEECCCCc-EEEccccccCCccccCEE---ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCC
Confidence 66666 89999997763 33222111 111222222 346888999999999999999999999887664333 33
Q ss_pred EEcCCCCCEEEEEeCCCcEEEE
Q 046451 314 HWYPKIPGVISASSFDGKIGIY 335 (719)
Q Consensus 314 ~~spdg~~~las~s~Dg~I~iw 335 (719)
.+. ++ .|+.++.||.|+.|
T Consensus 358 ~~~-~~--~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 358 VVV-GD--GLLVQTRDGDLYAF 376 (377)
T ss_pred EEE-CC--EEEEEeCCceEEEe
Confidence 333 33 46677779998876
No 293
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.90 E-value=7e-07 Score=93.52 Aligned_cols=261 Identities=10% Similarity=0.065 Sum_probs=145.0
Q ss_pred EEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecc--cCCCCCceeeeecCCCCCCCCCccceEEEEc
Q 046451 14 AFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE--SPSSERFNRLAWGKNGSGSEDFSLGLVAGGL 91 (719)
Q Consensus 14 afSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~--~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs 91 (719)
.+||||+.|.++..--.=..+-..+..|.+||..+.+...++.+-.. ......-..+++++|| ++|+...
T Consensus 52 ~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dg--------k~l~V~n 123 (352)
T TIGR02658 52 VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDN--------KTLLFYQ 123 (352)
T ss_pred eECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCC--------CEEEEec
Confidence 39999998888754000000011345679999997776655543111 0012233478999998 5677655
Q ss_pred -C-CCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCcc--CCccC
Q 046451 92 -V-DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF--PPLRG 167 (719)
Q Consensus 92 -~-dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~--~~l~~ 167 (719)
. +..|.++|+ .++ +.+..+..- +...-+..+. + . +.+-+.||......+.+......- ..+..
T Consensus 124 ~~p~~~V~VvD~------~~~---kvv~ei~vp-~~~~vy~t~e-~-~-~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~ 190 (352)
T TIGR02658 124 FSPSPAVGVVDL------EGK---AFVRMMDVP-DCYHIFPTAN-D-T-FFMHCRDGSLAKVGYGTKGNPKIKPTEVFHP 190 (352)
T ss_pred CCCCCEEEEEEC------CCC---cEEEEEeCC-CCcEEEEecC-C-c-cEEEeecCceEEEEecCCCceEEeeeeeecC
Confidence 4 689999999 444 555555431 1222222222 1 1 122334555544444332221100 00000
Q ss_pred CC-CCCCCCeEEEEecC-CCCcEEEEEeCCCcEEEEECCCC-----ceeEEecCC------CCCceeEEEECCCCCcEEE
Q 046451 168 NG-SAAQGEISFVSWNS-KVQHILASTSYNGTTVVWDLKKQ-----KPVISFSES------IKRRCSVLQWNPDVATQLV 234 (719)
Q Consensus 168 ~~-~~h~~~I~~l~~sp-~g~~~l~s~s~dg~I~iwd~~~~-----~~~~~~~~~------~~~~i~~l~~sp~g~~~l~ 234 (719)
.. --.... .|.+ +| .++.+..+ |+|++.|+... +.+..+... ....+.-++++++++++++
T Consensus 191 ~~~~v~~rP----~~~~~dg-~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV 264 (352)
T TIGR02658 191 EDEYLINHP----AYSNKSG-RLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYL 264 (352)
T ss_pred CccccccCC----ceEcCCC-cEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEE
Confidence 00 000011 3345 55 45555555 99999996443 333322211 1233344999999977666
Q ss_pred EEeC-C-----CCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCC-eEEEEe-CCCcEEEEECCCCeEEEEec
Q 046451 235 VASD-E-----DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS-YLLTCA-KDNRTICWDTVSGEIVSELP 304 (719)
Q Consensus 235 ~~s~-d-----~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~-~l~sgs-~Dg~I~iwd~~~~~~~~~l~ 304 (719)
.... . .....|.++|..+. +.+..+.. ...+..|++++ |++ +|++.. .++.|.++|..+++.+.++.
T Consensus 265 ~~~~~~~~thk~~~~~V~ViD~~t~-kvi~~i~v-G~~~~~iavS~-Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~ 339 (352)
T TIGR02658 265 LADQRAKWTHKTASRFLFVVDAKTG-KRLRKIEL-GHEIDSINVSQ-DAKPLLYALSTGDKTLYIFDAETGKELSSVN 339 (352)
T ss_pred EecCCccccccCCCCEEEEEECCCC-eEEEEEeC-CCceeeEEECC-CCCeEEEEeCCCCCcEEEEECcCCeEEeeec
Confidence 4321 1 11237999999875 44555442 34889999999 777 777665 67889999999999998883
No 294
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.82 E-value=5e-06 Score=81.68 Aligned_cols=233 Identities=18% Similarity=0.183 Sum_probs=131.9
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccc---cCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRH---KGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h---~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
++..-.|..|.|-...+.-. ..+.+.... .-.-+.++|++ |+.+||.+...|+|++||+..... ..+.
T Consensus 11 ~lAi~qd~~iEiRsa~Ddf~-------si~~kcqVpkD~~PQWRkl~WSp-D~tlLa~a~S~G~i~vfdl~g~~l-f~I~ 81 (282)
T PF15492_consen 11 LLAILQDQCIEIRSAKDDFS-------SIIGKCQVPKDPNPQWRKLAWSP-DCTLLAYAESTGTIRVFDLMGSEL-FVIP 81 (282)
T ss_pred EEEEEeccEEEEEeccCCch-------heeEEEecCCCCCchheEEEECC-CCcEEEEEcCCCeEEEEeccccee-EEcC
Confidence 44444677777766532111 222332222 23457899999 899999999999999999986432 2222
Q ss_pred CccCCCCCCCCCeEEEEecCCC-----CcEEEEEeCCCcEEEEECCC-----CceeEE--ecCCCCCceeEEEECCCCCc
Q 046451 164 PLRGNGSAAQGEISFVSWNSKV-----QHILASTSYNGTTVVWDLKK-----QKPVIS--FSESIKRRCSVLQWNPDVAT 231 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g-----~~~l~s~s~dg~I~iwd~~~-----~~~~~~--~~~~~~~~i~~l~~sp~g~~ 231 (719)
.-..........|..+.|.... ...|++-..+|.++-|-+.. .+...+ |.......|.++.|++.. +
T Consensus 82 p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h-~ 160 (282)
T PF15492_consen 82 PAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKH-R 160 (282)
T ss_pred cccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCC-C
Confidence 1111111233467777775432 23566777888887776532 223333 333457789999999997 4
Q ss_pred EEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeE-EEEeCCC------cEEEEECCCCeEEEEec
Q 046451 232 QLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYL-LTCAKDN------RTICWDTVSGEIVSELP 304 (719)
Q Consensus 232 ~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l-~sgs~Dg------~I~iwd~~~~~~~~~l~ 304 (719)
+|++|+..... -..+ .+...++++-..-.+...+. ++...|+ +..+|.+-+.+......
T Consensus 161 LLlVgG~~~~~--~~~s------------~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~ 226 (282)
T PF15492_consen 161 LLLVGGCEQNQ--DGMS------------KASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQG 226 (282)
T ss_pred EEEEeccCCCC--Cccc------------cccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccc
Confidence 66666554310 0000 01112222222211011111 1111111 12344443333333333
Q ss_pred CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 305 AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 305 ~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
...+.|..|..|||| .+||+...+|.|.+|++-+-++..
T Consensus 227 ~~~d~i~kmSlSPdg-~~La~ih~sG~lsLW~iPsL~~~~ 265 (282)
T PF15492_consen 227 QEQDGIFKMSLSPDG-SLLACIHFSGSLSLWEIPSLRLQR 265 (282)
T ss_pred cCCCceEEEEECCCC-CEEEEEEcCCeEEEEecCcchhhc
Confidence 456789999999999 899999999999999999987755
No 295
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.81 E-value=7.7e-09 Score=107.75 Aligned_cols=217 Identities=12% Similarity=0.178 Sum_probs=152.1
Q ss_pred ceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC
Q 046451 115 LIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY 194 (719)
Q Consensus 115 ~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~ 194 (719)
.+..+.+|...|..+.-.. +.+-+++++.|.+|++|.++.......-...+.....|+..|.++.|-.+. +.++ +.
T Consensus 727 rL~nf~GH~~~iRai~Aid-NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~l-r~i~--Sc 802 (1034)
T KOG4190|consen 727 RLCNFTGHQEKIRAIAAID-NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADL-RSIA--SC 802 (1034)
T ss_pred eeecccCcHHHhHHHHhcc-cccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeecc-ceee--ec
Confidence 4566788999998887655 678899999999999999976443222222344556788899999998874 3444 55
Q ss_pred CCcEEEEECCCCceeEEecC-CCCCceeEEEECCC-CCcEEEEE-eCCCCCCcEEEEecCCCCCceEEe-----eCCCCC
Q 046451 195 NGTTVVWDLKKQKPVISFSE-SIKRRCSVLQWNPD-VATQLVVA-SDEDSSPALRLWDMRNTMSPVKEF-----VGHTKG 266 (719)
Q Consensus 195 dg~I~iwd~~~~~~~~~~~~-~~~~~i~~l~~sp~-g~~~l~~~-s~d~~~~~I~lwDl~~~~~~~~~~-----~~h~~~ 266 (719)
||.|++||--.++.+..... ...+.+..+..-++ .+.+++.+ +... +|+++|.|... -..++ .+...-
T Consensus 803 D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeS---TVKl~DaRsce-~~~E~kVcna~~Pna~ 878 (1034)
T KOG4190|consen 803 DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAES---TVKLFDARSCE-WTCELKVCNAPGPNAL 878 (1034)
T ss_pred cCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchh---hheeeeccccc-ceeeEEeccCCCCchh
Confidence 88899999988877664443 22333334444343 22344444 4554 89999998753 22232 234456
Q ss_pred eeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEE-EeCCCCcc
Q 046451 267 VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGI-YNIEGCSR 342 (719)
Q Consensus 267 V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~i-wd~~~~~~ 342 (719)
+.+++..+ .|++++.+-.+|+|.+.|.++|+.+..++........++--.| ..|+....|.++.+ |....+..
T Consensus 879 ~R~iaVa~-~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaapsd--q~L~~saldHslaVnWhaldgim 952 (1034)
T KOG4190|consen 879 TRAIAVAD-KGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAAPSD--QALAQSALDHSLAVNWHALDGIM 952 (1034)
T ss_pred eeEEEecc-CcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcCchh--HHHHhhcccceeEeeehhcCCee
Confidence 88999998 8999999999999999999999998887765554555543333 57777777999998 88766654
No 296
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=98.80 E-value=6.1e-07 Score=86.45 Aligned_cols=197 Identities=8% Similarity=0.016 Sum_probs=128.9
Q ss_pred CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCC
Q 046451 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSES 215 (719)
Q Consensus 136 ~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~ 215 (719)
..+|+.|+..|...+|...+.+....+ . ..+...|+-+.=.-+....+..++.|.++++++++.+....... .
T Consensus 84 c~~la~gG~~g~fd~~~~~tn~~h~~~--c----d~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h-~ 156 (344)
T KOG4532|consen 84 CVTLADGGASGQFDLFACNTNDGHLYQ--C----DVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVH-N 156 (344)
T ss_pred ccEEEeccccceeeeecccCcccceee--e----cccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceee-c
Confidence 468999999999999999876543221 1 11222222111111112346667888888888877543322222 1
Q ss_pred CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEE--eeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEE
Q 046451 216 IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE--FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293 (719)
Q Consensus 216 ~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~--~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd 293 (719)
..-...++.+++|++ ++++.++.. .|.+|.+.+..+-+.. +...++.-.+..|+. ....+|++..||++.|||
T Consensus 157 ~~~~~ns~~~snd~~-~~~~Vgds~---~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~-~~~~FAv~~Qdg~~~I~D 231 (344)
T KOG4532|consen 157 QNLTQNSLHYSNDPS-WGSSVGDSR---RVFRYAIDDESEYIENIYEAPTSDHGFYNSFSE-NDLQFAVVFQDGTCAIYD 231 (344)
T ss_pred cccceeeeEEcCCCc-eEEEecCCC---cceEEEeCCccceeeeeEecccCCCceeeeecc-CcceEEEEecCCcEEEEE
Confidence 113488999999985 555555554 7999998765543322 223445567889998 778999999999999999
Q ss_pred CCCCeEEE-----EecCCCCCeEEeEEcCCCCC-EEEEEeCCCcEEEEeCCCCcccc
Q 046451 294 TVSGEIVS-----ELPAGTNWNFDIHWYPKIPG-VISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 294 ~~~~~~~~-----~l~~h~~~v~~l~~spdg~~-~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
++...... +-..|.+.+..+.|++.|.. +|.-.-.-+.+++.|+++.+...
T Consensus 232 VR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q 288 (344)
T KOG4532|consen 232 VRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQ 288 (344)
T ss_pred ecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceee
Confidence 98653322 22358889999999986632 44444446799999999887644
No 297
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=98.78 E-value=8.2e-08 Score=97.57 Aligned_cols=159 Identities=11% Similarity=0.212 Sum_probs=110.6
Q ss_pred EEEEecCCCCcEEEEEeCCCcEEEEECCCCce----eEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC
Q 046451 177 SFVSWNSKVQHILASTSYNGTTVVWDLKKQKP----VISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN 252 (719)
Q Consensus 177 ~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~----~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~ 252 (719)
..+..++.+ .+|+++..+....+++++.... +..+. ....-+.+.|..+....+++-..++ ...+.+|....
T Consensus 66 ~~~~~s~~~-~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~--v~~~~~ai~~~~~~~sv~v~dkagD-~~~~di~s~~~ 141 (390)
T KOG3914|consen 66 ALVLTSDSG-RLVAVATSSKQRAVFDYRENPKGAKLLDVSC--VPKRPTAISFIREDTSVLVADKAGD-VYSFDILSADS 141 (390)
T ss_pred cccccCCCc-eEEEEEeCCCceEEEEEecCCCcceeeeEee--cccCcceeeeeeccceEEEEeecCC-ceeeeeecccc
Confidence 334455554 5888888888877777765432 22221 3333445555555443333333322 12455555543
Q ss_pred CCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEe-cCCCCCeEEeEEcCCCCCEEEEEeCCCc
Q 046451 253 TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSEL-PAGTNWNFDIHWYPKIPGVISASSFDGK 331 (719)
Q Consensus 253 ~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l-~~h~~~v~~l~~spdg~~~las~s~Dg~ 331 (719)
.+...+-||...++.|+|++ |+++|+++..|..|+|-.+..-..+..| -+|...|..++..++. .|+++|.|++
T Consensus 142 --~~~~~~lGhvSml~dVavS~-D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~--~LlS~sGD~t 216 (390)
T KOG3914|consen 142 --GRCEPILGHVSMLLDVAVSP-DDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY--LLLSGSGDKT 216 (390)
T ss_pred --cCcchhhhhhhhhheeeecC-CCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc--eeeecCCCCc
Confidence 33455678999999999999 8899999999999999887655555544 4799999999999875 7999999999
Q ss_pred EEEEeCCCCcccc
Q 046451 332 IGIYNIEGCSRYG 344 (719)
Q Consensus 332 I~iwd~~~~~~~~ 344 (719)
|++||+.+++...
T Consensus 217 lr~Wd~~sgk~L~ 229 (390)
T KOG3914|consen 217 LRLWDITSGKLLD 229 (390)
T ss_pred EEEEecccCCccc
Confidence 9999999999875
No 298
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.74 E-value=2.9e-08 Score=98.57 Aligned_cols=170 Identities=14% Similarity=0.160 Sum_probs=123.7
Q ss_pred EEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC---
Q 046451 130 EFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ--- 206 (719)
Q Consensus 130 ~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~--- 206 (719)
+|+-.-..+-++.+.+..|-+-|++++..... ..++.|.++.|...+ +++..|+.+|.|..+|++.+
T Consensus 218 awSlni~gyhfs~G~sqqv~L~nvetg~~qsf---------~sksDVfAlQf~~s~-nLv~~GcRngeI~~iDLR~rnqG 287 (425)
T KOG2695|consen 218 AWSLNIMGYHFSVGLSQQVLLTNVETGHQQSF---------QSKSDVFALQFAGSD-NLVFNGCRNGEIFVIDLRCRNQG 287 (425)
T ss_pred hhhhccceeeecccccceeEEEEeeccccccc---------ccchhHHHHHhcccC-CeeEecccCCcEEEEEeeecccC
Confidence 56532222335666677888999988754321 135589999998875 69999999999999999864
Q ss_pred --ceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCc---eEEeeCCCCCeeEEEe--CCCCCCe
Q 046451 207 --KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSP---VKEFVGHTKGVIAMSW--CPNDSSY 279 (719)
Q Consensus 207 --~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~---~~~~~~h~~~V~~v~~--sp~d~~~ 279 (719)
.+...+. |.+.|+++..-......|++.+.++ .|++||+|.. ++ +..++||...-.-+-+ .+ ....
T Consensus 288 ~~~~a~rly--h~Ssvtslq~Lq~s~q~LmaS~M~g---kikLyD~R~~-K~~~~V~qYeGHvN~~a~l~~~v~~-eeg~ 360 (425)
T KOG2695|consen 288 NGWCAQRLY--HDSSVTSLQILQFSQQKLMASDMTG---KIKLYDLRAT-KCKKSVMQYEGHVNLSAYLPAHVKE-EEGS 360 (425)
T ss_pred CCcceEEEE--cCcchhhhhhhccccceEeeccCcC---ceeEeeehhh-hcccceeeeeccccccccccccccc-ccce
Confidence 4556665 8999999887663345677777777 8999999865 33 7888888765444433 34 5668
Q ss_pred EEEEeCCCcEEEEECCCCeEEEEecCCCC----CeEEeEEc
Q 046451 280 LLTCAKDNRTICWDTVSGEIVSELPAGTN----WNFDIHWY 316 (719)
Q Consensus 280 l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~----~v~~l~~s 316 (719)
++++++|...|||.+++|.++.++..... .+.+++|.
T Consensus 361 I~s~GdDcytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~ 401 (425)
T KOG2695|consen 361 IFSVGDDCYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFD 401 (425)
T ss_pred EEEccCeeEEEEEecccCceeeccCCCCccccccccceehh
Confidence 88899999999999999999998875433 34444444
No 299
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.70 E-value=1.5e-08 Score=111.11 Aligned_cols=223 Identities=16% Similarity=0.248 Sum_probs=154.5
Q ss_pred CceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe
Q 046451 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS 193 (719)
Q Consensus 114 ~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s 193 (719)
+.++.+..|+...+|++|+- +.++|+.|+..|.|++|++.++..... ...|.+.|+.+.-+.+|...|.+++
T Consensus 1092 r~w~~frd~~~~fTc~afs~-~~~hL~vG~~~Geik~~nv~sG~~e~s-------~ncH~SavT~vePs~dgs~~Ltsss 1163 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSG-GTNHLAVGSHAGEIKIFNVSSGSMEES-------VNCHQSAVTLVEPSVDGSTQLTSSS 1163 (1516)
T ss_pred ccchhhhccccceeeEEeec-CCceEEeeeccceEEEEEccCcccccc-------ccccccccccccccCCcceeeeecc
Confidence 55667788999999999998 789999999999999999999875433 4678999999999999876666655
Q ss_pred CCC-cEEEEECCC-CceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC---CCCCee
Q 046451 194 YNG-TTVVWDLKK-QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG---HTKGVI 268 (719)
Q Consensus 194 ~dg-~I~iwd~~~-~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~---h~~~V~ 268 (719)
... -..+|++.. +...++|. .-.++.|+..... -+.|...+ ...|||+.+...+..-+.+ ....-+
T Consensus 1164 ~S~PlsaLW~~~s~~~~~Hsf~-----ed~~vkFsn~~q~-r~~gt~~d---~a~~YDvqT~~~l~tylt~~~~~~y~~n 1234 (1516)
T KOG1832|consen 1164 SSSPLSALWDASSTGGPRHSFD-----EDKAVKFSNSLQF-RALGTEAD---DALLYDVQTCSPLQTYLTDTVTSSYSNN 1234 (1516)
T ss_pred ccCchHHHhccccccCcccccc-----ccceeehhhhHHH-HHhccccc---ceEEEecccCcHHHHhcCcchhhhhhcc
Confidence 554 577999875 34444444 4457788876433 33333333 5999999986443332332 222336
Q ss_pred EEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCC
Q 046451 269 AMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDS 348 (719)
Q Consensus 269 ~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~ 348 (719)
+..|+| +..+++ .|| .+||.+..+.++.|...+..+ .-.|+|.|. -++..+ .|||+.+-++...
T Consensus 1235 ~a~FsP-~D~LIl---ndG--vLWDvR~~~aIh~FD~ft~~~-~G~FHP~g~-eVIINS-----EIwD~RTF~lLh~--- 1298 (1516)
T KOG1832|consen 1235 LAHFSP-CDTLIL---NDG--VLWDVRIPEAIHRFDQFTDYG-GGGFHPSGN-EVIINS-----EIWDMRTFKLLHS--- 1298 (1516)
T ss_pred ccccCC-CcceEe---eCc--eeeeeccHHHHhhhhhheecc-cccccCCCc-eEEeec-----hhhhhHHHHHHhc---
Confidence 788999 666665 455 489999988888887655333 346999994 444444 5899999877551
Q ss_pred CCCCCCccCcceecCCCceeeeeCCcEEEEc
Q 046451 349 NFSAAPLRAPKWYKRPAGASFGFGGKLVSFH 379 (719)
Q Consensus 349 ~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~ 379 (719)
.| -+ +-+.++|...|.++.-.
T Consensus 1299 --------VP-~L-dqc~VtFNstG~VmYa~ 1319 (1516)
T KOG1832|consen 1299 --------VP-SL-DQCAVTFNSTGDVMYAM 1319 (1516)
T ss_pred --------Cc-cc-cceEEEeccCccchhhh
Confidence 11 11 12567888888776433
No 300
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.69 E-value=2.5e-07 Score=94.97 Aligned_cols=253 Identities=15% Similarity=0.171 Sum_probs=173.4
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
.-|.+.|+.+.-... +++.+++.||.++.|.-. ...+.+.++.+..|.+.|.+++.+- ++.+++
T Consensus 6 ymhrd~i~hv~~tka---------~fiiqASlDGh~KFWkKs------~isGvEfVKhFraHL~~I~sl~~S~-dg~L~~ 69 (558)
T KOG0882|consen 6 YMHRDVITHVFPTKA---------KFIIQASLDGHKKFWKKS------RISGVEFVKHFRAHLGVILSLAVSY-DGWLFR 69 (558)
T ss_pred hcccceeeeEeeehh---------heEEeeecchhhhhcCCC------CccceeehhhhHHHHHHHHhhhccc-cceeEe
Confidence 346677776665544 699999999999999862 2233466777888999999999988 788899
Q ss_pred EEeC-CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecC-CC-C--cEEEEEeCCCcEEEEECCCCc-eeEEecC
Q 046451 141 SGAD-DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNS-KV-Q--HILASTSYNGTTVVWDLKKQK-PVISFSE 214 (719)
Q Consensus 141 sgs~-dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp-~g-~--~~l~s~s~dg~I~iwd~~~~~-~~~~~~~ 214 (719)
+.+. |..++++|+++......+. .. ...+ .++|.. .| . .+.++.-.+|.+.++|-.... ....+..
T Consensus 70 Sv~d~Dhs~KvfDvEn~DminmiK---L~--~lPg---~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkk 141 (558)
T KOG0882|consen 70 SVEDPDHSVKVFDVENFDMINMIK---LV--DLPG---FAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKK 141 (558)
T ss_pred eccCcccceeEEEeeccchhhhcc---cc--cCCC---ceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecc
Confidence 9777 9999999998876553321 10 0111 223322 22 1 233334457899999987654 4444555
Q ss_pred CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC----C----------ceEEeeCCCCCeeEEEeCCCCCCeE
Q 046451 215 SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM----S----------PVKEFVGHTKGVIAMSWCPNDSSYL 280 (719)
Q Consensus 215 ~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~----~----------~~~~~~~h~~~V~~v~~sp~d~~~l 280 (719)
.|..+|.++.+++.++ .+++....| .|.-|...... . -+..+........++.|++ ++..+
T Consensus 142 lH~sPV~~i~y~qa~D-s~vSiD~~g---mVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp-~g~qi 216 (558)
T KOG0882|consen 142 LHFSPVKKIRYNQAGD-SAVSIDISG---MVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSP-DGAQI 216 (558)
T ss_pred cccCceEEEEeecccc-ceeeccccc---eeEeecCCCcccCccccccccccccchhhcccccccCccceEEcc-ccCcc
Confidence 7999999999999985 455555454 89999886210 1 0111222345678999999 99999
Q ss_pred EEEeCCCcEEEEECCCCeEEEEecC--------------------------------CCC-CeEEeEEcCCCCCEEEEEe
Q 046451 281 LTCAKDNRTICWDTVSGEIVSELPA--------------------------------GTN-WNFDIHWYPKIPGVISASS 327 (719)
Q Consensus 281 ~sgs~Dg~I~iwd~~~~~~~~~l~~--------------------------------h~~-~v~~l~~spdg~~~las~s 327 (719)
.+-+.|..|+++++++|+.+++++. |.. .-+.+.|...+ ++|+-++
T Consensus 217 stl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~-~flly~t 295 (558)
T KOG0882|consen 217 STLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESG-NFLLYGT 295 (558)
T ss_pred cccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCC-CEEEeec
Confidence 9999999999999999887665532 111 22456777777 6777776
Q ss_pred CCCcEEEEeCCCCcccc
Q 046451 328 FDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 328 ~Dg~I~iwd~~~~~~~~ 344 (719)
.= -|+|.++.++++..
T Consensus 296 ~~-gikvin~~tn~v~r 311 (558)
T KOG0882|consen 296 IL-GIKVINLDTNTVVR 311 (558)
T ss_pred ce-eEEEEEeecCeEEE
Confidence 43 48888888877654
No 301
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.68 E-value=8.3e-06 Score=93.71 Aligned_cols=248 Identities=15% Similarity=0.184 Sum_probs=152.8
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEe
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA 143 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs 143 (719)
++.|.++.|.-+. .-|+.+..+|.|.+-|.++ ..+.....-.+.|.+++|++ |...++..+
T Consensus 68 d~~i~s~~fl~d~--------~~i~v~~~~G~iilvd~et----------~~~eivg~vd~GI~aaswS~-Dee~l~liT 128 (1265)
T KOG1920|consen 68 DDEIVSVQFLADT--------NSICVITALGDIILVDPET----------LELEIVGNVDNGISAASWSP-DEELLALIT 128 (1265)
T ss_pred CcceEEEEEeccc--------ceEEEEecCCcEEEEcccc----------cceeeeeeccCceEEEeecC-CCcEEEEEe
Confidence 4689999999887 6888888999999998743 23333344567899999999 889999998
Q ss_pred CCCcEEEEcC----CCCCCC-------Ccc---------CCccCCCC-----------------CCCCCeEEEEecCCCC
Q 046451 144 DDGEICIWDL----SAPAEP-------SHF---------PPLRGNGS-----------------AAQGEISFVSWNSKVQ 186 (719)
Q Consensus 144 ~dg~I~iwdl----~~~~~~-------~~~---------~~l~~~~~-----------------~h~~~I~~l~~sp~g~ 186 (719)
.+++|.+-+- -..+.. ..+ ..+++... ...+.=..|+|--+|+
T Consensus 129 ~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~ 208 (1265)
T KOG1920|consen 129 GRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGE 208 (1265)
T ss_pred CCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCc
Confidence 8888776532 111110 000 00110000 0111223589998985
Q ss_pred cEEEEEe----CC-CcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC--ceEE
Q 046451 187 HILASTS----YN-GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS--PVKE 259 (719)
Q Consensus 187 ~~l~s~s----~d-g~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~--~~~~ 259 (719)
++++.. .+ ..|+|||-+ +.. ........+.-.+++|-|.| .++++-..+.++..|.+|.-+.... -...
T Consensus 209 -~fAVs~~~~~~~~RkirV~drE-g~L-ns~se~~~~l~~~LsWkPsg-s~iA~iq~~~sd~~IvffErNGL~hg~f~l~ 284 (1265)
T KOG1920|consen 209 -YFAVSFVESETGTRKIRVYDRE-GAL-NSTSEPVEGLQHSLSWKPSG-SLIAAIQCKTSDSDIVFFERNGLRHGEFVLP 284 (1265)
T ss_pred -EEEEEEEeccCCceeEEEeccc-chh-hcccCcccccccceeecCCC-CeEeeeeecCCCCcEEEEecCCccccccccC
Confidence 666622 23 789999977 332 22222345556789999988 4677766666666799998532211 1111
Q ss_pred eeCCCCCeeEEEeCCCCCCeEEE---EeCCCcEEEEECCCCeE--EEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEE
Q 046451 260 FVGHTKGVIAMSWCPNDSSYLLT---CAKDNRTICWDTVSGEI--VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGI 334 (719)
Q Consensus 260 ~~~h~~~V~~v~~sp~d~~~l~s---gs~Dg~I~iwd~~~~~~--~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~i 334 (719)
+......|..++|+. ++..|++ +.....|++|-+.+..- ...+....... +.|+|.....|..-..+|.+.+
T Consensus 285 ~p~de~~ve~L~Wns-~sdiLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~~--~~W~p~~~~~L~v~~~sG~~~v 361 (1265)
T KOG1920|consen 285 FPLDEKEVEELAWNS-NSDILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKAL--LMWDPVTEKTLHVLRESGQRLV 361 (1265)
T ss_pred CcccccchheeeecC-CCCceeeeecccccceEEEEEecCeEEEEEEEEecccccc--ccccCCCceeEEEEecCCcEEE
Confidence 222334589999998 8898887 55556699999876542 23333322222 7788865555555445666555
Q ss_pred EeC
Q 046451 335 YNI 337 (719)
Q Consensus 335 wd~ 337 (719)
+++
T Consensus 362 ~~~ 364 (1265)
T KOG1920|consen 362 RDF 364 (1265)
T ss_pred EEE
Confidence 554
No 302
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.66 E-value=2.4e-07 Score=88.82 Aligned_cols=148 Identities=18% Similarity=0.300 Sum_probs=98.7
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc-ccCCEEEEEEeCCCCCEEEEEeC-----CCcEEEEcCCCCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR-HKGPVRGLEFNSFTPNLLASGAD-----DGEICIWDLSAPAE 158 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~-h~~~V~~l~fsp~~~~~lasgs~-----dg~I~iwdl~~~~~ 158 (719)
..++++..||.+.+++.+... .....+.. |.+. .+.+... .+++|.++.. -+..++|+++-.+.
T Consensus 102 t~V~~~~~dg~~~v~s~~~~~--------~~~~~i~~~~~~~-as~~~~~-~~~~i~s~~~g~~n~~d~~~a~~~~p~~t 171 (319)
T KOG4714|consen 102 NRVCIGYADGSLAVFSTDKDL--------ALMSRIPSIHSGS-ASRKICR-HGNSILSGGCGNWNAQDNFYANTLDPIKT 171 (319)
T ss_pred CceEecCCCceEEEEechHHH--------hhhhhcccccccc-cccceee-cccEEecCCcceEeeccceeeeccccccc
Confidence 579999999999999985311 11111111 2111 1222222 2344443321 23456666654333
Q ss_pred CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeC
Q 046451 159 PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASD 238 (719)
Q Consensus 159 ~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~ 238 (719)
... -+ . ....|.+++-+|.-++++++|+.||.+.+||.++......+...|+..|..+-|+|.....|+++++
T Consensus 172 ~~~---~~---~-~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~se 244 (319)
T KOG4714|consen 172 LIP---SK---K-ALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSE 244 (319)
T ss_pred ccc---cc---c-ccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecC
Confidence 211 11 1 1224999999998888999999999999999998865555544899999999999998889999999
Q ss_pred CCCCCcEEEEecCC
Q 046451 239 EDSSPALRLWDMRN 252 (719)
Q Consensus 239 d~~~~~I~lwDl~~ 252 (719)
|| .+..||..+
T Consensus 245 dG---slw~wdas~ 255 (319)
T KOG4714|consen 245 DG---SLWHWDAST 255 (319)
T ss_pred CC---cEEEEcCCC
Confidence 98 899999863
No 303
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.64 E-value=1.5e-07 Score=93.67 Aligned_cols=177 Identities=16% Similarity=0.179 Sum_probs=119.0
Q ss_pred cccccCccceEEEcCC--CCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCC
Q 046451 3 CIKGINRSASVAFAPD--APYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSE 80 (719)
Q Consensus 3 ~l~~~~~V~~vafSpd--g~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~ 80 (719)
+--.+...+.|+||-+ |-.+++|.. ..+-+-++.++.. ..+..+..|.++.|...+
T Consensus 207 ~SlQi~~a~~CawSlni~gyhfs~G~s-----------qqv~L~nvetg~~-------qsf~sksDVfAlQf~~s~---- 264 (425)
T KOG2695|consen 207 CSLQIPKAWSCAWSLNIMGYHFSVGLS-----------QQVLLTNVETGHQ-------QSFQSKSDVFALQFAGSD---- 264 (425)
T ss_pred eeecCCcchhhhhhhccceeeeccccc-----------ceeEEEEeecccc-------cccccchhHHHHHhcccC----
Confidence 3334455566677743 334445533 3335667765532 234578899999998866
Q ss_pred CCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCC
Q 046451 81 DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 81 ~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~ 160 (719)
.++..|+.+|.|..+|+..... ..+ .+... ..|...|+++.....++.+|.+.+.+|+|++||++.-+...
T Consensus 265 ----nLv~~GcRngeI~~iDLR~rnq-G~~---~~a~r-lyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~ 335 (425)
T KOG2695|consen 265 ----NLVFNGCRNGEIFVIDLRCRNQ-GNG---WCAQR-LYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKK 335 (425)
T ss_pred ----CeeEecccCCcEEEEEeeeccc-CCC---cceEE-EEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhccc
Confidence 7999999999999999965422 111 23333 34889999988776678999999999999999998777633
Q ss_pred ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS 213 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~ 213 (719)
.+....++...+. -.-+..++.. ..+++++.|...+||.++.+..+.++.
T Consensus 336 ~V~qYeGHvN~~a--~l~~~v~~ee-g~I~s~GdDcytRiWsl~~ghLl~tip 385 (425)
T KOG2695|consen 336 SVMQYEGHVNLSA--YLPAHVKEEE-GSIFSVGDDCYTRIWSLDSGHLLCTIP 385 (425)
T ss_pred ceeeeeccccccc--cccccccccc-ceEEEccCeeEEEEEecccCceeeccC
Confidence 3322333222211 1122334443 478889999999999999999888876
No 304
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.64 E-value=4.3e-08 Score=107.60 Aligned_cols=275 Identities=13% Similarity=0.266 Sum_probs=176.1
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
....+|++||-+.++|++|+..|.| ++|++..+...... ..|...|+-+.=+.+|. -.
T Consensus 1101 ~~~fTc~afs~~~~hL~vG~~~Gei----------k~~nv~sG~~e~s~-----ncH~SavT~vePs~dgs-------~~ 1158 (1516)
T KOG1832|consen 1101 TALFTCIAFSGGTNHLAVGSHAGEI----------KIFNVSSGSMEESV-----NCHQSAVTLVEPSVDGS-------TQ 1158 (1516)
T ss_pred ccceeeEEeecCCceEEeeeccceE----------EEEEccCccccccc-----cccccccccccccCCcc-------ee
Confidence 3557899999999999999988877 89999988766554 44889999999998884 34
Q ss_pred EEEEcCCC-cEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 87 VAGGLVDG-SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 87 lasgs~dg-~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
|.+++... ...+|+..+ .+ ...+.+. .-.++.|+. ....-+.|+......|||+.+.....++ +
T Consensus 1159 Ltsss~S~PlsaLW~~~s-----~~---~~~Hsf~----ed~~vkFsn-~~q~r~~gt~~d~a~~YDvqT~~~l~ty--l 1223 (1516)
T KOG1832|consen 1159 LTSSSSSSPLSALWDASS-----TG---GPRHSFD----EDKAVKFSN-SLQFRALGTEADDALLYDVQTCSPLQTY--L 1223 (1516)
T ss_pred eeeccccCchHHHhcccc-----cc---Ccccccc----ccceeehhh-hHHHHHhcccccceEEEecccCcHHHHh--c
Confidence 44444444 678999842 22 3444443 335788987 3444455555567899999999877664 3
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
..... ....-++..|+|++. +++ .|| .+||++..+.++.|. ... ....-.|+|.|. .++.-+
T Consensus 1224 t~~~~-~~y~~n~a~FsP~D~-LIl---ndG--vLWDvR~~~aIh~FD-~ft-~~~~G~FHP~g~-eVIINS-------- 1285 (1516)
T KOG1832|consen 1224 TDTVT-SSYSNNLAHFSPCDT-LIL---NDG--VLWDVRIPEAIHRFD-QFT-DYGGGGFHPSGN-EVIINS-------- 1285 (1516)
T ss_pred Ccchh-hhhhccccccCCCcc-eEe---eCc--eeeeeccHHHHhhhh-hhe-ecccccccCCCc-eEEeec--------
Confidence 32221 222337889999963 443 455 589999998888887 333 233446999985 444433
Q ss_pred EEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe--C----C-----------CcEEEEECCCCeEEEEecCCCC
Q 046451 246 RLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA--K----D-----------NRTICWDTVSGEIVSELPAGTN 308 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs--~----D-----------g~I~iwd~~~~~~~~~l~~h~~ 308 (719)
.|||+|+. +.++....- .-..|.|+. .|+.++..- . | ...+-||..+...+.++.....
T Consensus 1286 EIwD~RTF-~lLh~VP~L--dqc~VtFNs-tG~VmYa~~~~~d~~sdvh~~r~k~p~fSSFRTf~a~dYs~iaTi~v~R~ 1361 (1516)
T KOG1832|consen 1286 EIWDMRTF-KLLHSVPSL--DQCAVTFNS-TGDVMYAMLNIEDVMSDVHTRRVKHPLFSSFRTFDAIDYSDIATIPVDRC 1361 (1516)
T ss_pred hhhhhHHH-HHHhcCccc--cceEEEecc-Cccchhhhhhhhhhhhhhcccccccchhhhhccccccccccceeeecccc
Confidence 48999874 333332211 223566766 555444322 0 0 2345556666667777766544
Q ss_pred CeEEeEEcCCCCCEEEEEeC---------CCcEEEEeCCCCcc
Q 046451 309 WNFDIHWYPKIPGVISASSF---------DGKIGIYNIEGCSR 342 (719)
Q Consensus 309 ~v~~l~~spdg~~~las~s~---------Dg~I~iwd~~~~~~ 342 (719)
|.+++-++.. .++..... +-..++|.+...+.
T Consensus 1362 -~~Dlct~~~D-~~l~vIe~~~~~d~dq~sT~~r~yEIGR~r~ 1402 (1516)
T KOG1832|consen 1362 -LLDLCTEPTD-SFLGVIEMEDQEDMDQFSTSARMYEIGRRRP 1402 (1516)
T ss_pred -hhhhhcCCcc-ceEEEEeccChhhhhhhhhhhhhhhhcccCC
Confidence 7788888876 45554432 23677887776655
No 305
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.61 E-value=1.9e-05 Score=86.23 Aligned_cols=224 Identities=13% Similarity=0.078 Sum_probs=128.0
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCE-----EEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPV-----RGLEFNSFTPNLLASGADDGEICIWDLSAPAEP 159 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V-----~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~ 159 (719)
+.++.++.+|.|..+|. .++ +.+..+......+ ..-.. .+..++.++.+|.+..+|..+++..
T Consensus 161 ~~v~v~~~~g~l~ald~------~tG---~~~W~~~~~~~~~~~~~~~sP~v---~~~~v~~~~~~g~v~a~d~~~G~~~ 228 (394)
T PRK11138 161 GLVLVHTSNGMLQALNE------SDG---AVKWTVNLDVPSLTLRGESAPAT---AFGGAIVGGDNGRVSAVLMEQGQLI 228 (394)
T ss_pred CEEEEECCCCEEEEEEc------cCC---CEeeeecCCCCcccccCCCCCEE---ECCEEEEEcCCCEEEEEEccCChhh
Confidence 46777888999999998 555 5555544221110 11111 1245677788899999999888765
Q ss_pred CccCCccCCCCCCCCCeEEEEecC--CCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEe
Q 046451 160 SHFPPLRGNGSAAQGEISFVSWNS--KVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVAS 237 (719)
Q Consensus 160 ~~~~~l~~~~~~h~~~I~~l~~sp--~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s 237 (719)
..+................+.-+| .+ ..++.++.+|.++.+|..+++.+.+..... ...+.. ++. .+++++
T Consensus 229 W~~~~~~~~~~~~~~~~~~~~~sP~v~~-~~vy~~~~~g~l~ald~~tG~~~W~~~~~~---~~~~~~--~~~-~vy~~~ 301 (394)
T PRK11138 229 WQQRISQPTGATEIDRLVDVDTTPVVVG-GVVYALAYNGNLVALDLRSGQIVWKREYGS---VNDFAV--DGG-RIYLVD 301 (394)
T ss_pred heeccccCCCccchhcccccCCCcEEEC-CEEEEEEcCCeEEEEECCCCCEEEeecCCC---ccCcEE--ECC-EEEEEc
Confidence 432110000000000001111111 12 256677789999999999998877655211 112222 232 455566
Q ss_pred CCCCCCcEEEEecCCCCCceEEeeCC-CCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEE-eEE
Q 046451 238 DEDSSPALRLWDMRNTMSPVKEFVGH-TKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFD-IHW 315 (719)
Q Consensus 238 ~d~~~~~I~lwDl~~~~~~~~~~~~h-~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~-l~~ 315 (719)
.++ .|..+|..++.. +-....- .....+... .+.+|+.++.||.|+++|..+|+.+.+.+.....+.+ ..+
T Consensus 302 ~~g---~l~ald~~tG~~-~W~~~~~~~~~~~sp~v---~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~ 374 (394)
T PRK11138 302 QND---RVYALDTRGGVE-LWSQSDLLHRLLTAPVL---YNGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVV 374 (394)
T ss_pred CCC---eEEEEECCCCcE-EEcccccCCCcccCCEE---ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEE
Confidence 666 799999977632 2111110 111222222 2457788999999999999999998887654332332 223
Q ss_pred cCCCCCEEEEEeCCCcEEEEeC
Q 046451 316 YPKIPGVISASSFDGKIGIYNI 337 (719)
Q Consensus 316 spdg~~~las~s~Dg~I~iwd~ 337 (719)
. + ..|+.++.||.|+.+++
T Consensus 375 ~-~--~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 375 A-D--DKLLIQARDGTVYAITR 393 (394)
T ss_pred E-C--CEEEEEeCCceEEEEeC
Confidence 2 3 36777788999988764
No 306
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.61 E-value=3.1e-05 Score=84.52 Aligned_cols=230 Identities=14% Similarity=0.022 Sum_probs=133.4
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
+.|+.++.+|.++.+|. .++ +.+.+............. .+..++.++.++.|..+|..+++....+..
T Consensus 121 ~~v~v~~~~g~l~ald~------~tG---~~~W~~~~~~~~~ssP~v---~~~~v~v~~~~g~l~ald~~tG~~~W~~~~ 188 (394)
T PRK11138 121 GKVYIGSEKGQVYALNA------EDG---EVAWQTKVAGEALSRPVV---SDGLVLVHTSNGMLQALNESDGAVKWTVNL 188 (394)
T ss_pred CEEEEEcCCCEEEEEEC------CCC---CCcccccCCCceecCCEE---ECCEEEEECCCCEEEEEEccCCCEeeeecC
Confidence 46777888999999998 455 555544432221111222 235677788899999999999887654321
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCC------ceeEEEECC--CCCcEEEEE
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR------RCSVLQWNP--DVATQLVVA 236 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~------~i~~l~~sp--~g~~~l~~~ 236 (719)
-..... .... ..-... + ..++.++.+|.+..+|..+++.+..+...... ....+..+| .+. .++++
T Consensus 189 ~~~~~~-~~~~-~sP~v~-~--~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~-~vy~~ 262 (394)
T PRK11138 189 DVPSLT-LRGE-SAPATA-F--GGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGG-VVYAL 262 (394)
T ss_pred CCCccc-ccCC-CCCEEE-C--CEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECC-EEEEE
Confidence 000000 0000 011111 2 24666788999999999999877665421110 011111112 122 35555
Q ss_pred eCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCC-CeEEeEE
Q 046451 237 SDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTN-WNFDIHW 315 (719)
Q Consensus 237 s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~-~v~~l~~ 315 (719)
+.++ .+..+|..++.. +-... ......+.. ++..|+.++.||.|..+|..+|+.+........ ...+..+
T Consensus 263 ~~~g---~l~ald~~tG~~-~W~~~--~~~~~~~~~---~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v 333 (394)
T PRK11138 263 AYNG---NLVALDLRSGQI-VWKRE--YGSVNDFAV---DGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL 333 (394)
T ss_pred EcCC---eEEEEECCCCCE-EEeec--CCCccCcEE---ECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE
Confidence 5565 799999987643 22211 111122222 456777888999999999999988765432111 1222223
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 316 YPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 316 spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
. + ..|+.++.||.|.++|..+++.+.
T Consensus 334 ~-~--g~l~v~~~~G~l~~ld~~tG~~~~ 359 (394)
T PRK11138 334 Y-N--GYLVVGDSEGYLHWINREDGRFVA 359 (394)
T ss_pred E-C--CEEEEEeCCCEEEEEECCCCCEEE
Confidence 2 3 367788889999999999998765
No 307
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.60 E-value=2.2e-07 Score=91.04 Aligned_cols=168 Identities=18% Similarity=0.296 Sum_probs=115.8
Q ss_pred ccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCC-CCCCCCCeEEEEecCCCCcEEEEEeCCCcE
Q 046451 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGN-GSAAQGEISFVSWNSKVQHILASTSYNGTT 198 (719)
Q Consensus 120 ~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~-~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I 198 (719)
..|.-.|.+++|+. |...++++ .|-.|.+|++.-......+..++.+ ...-..-|++..|+|...+++...+..|.|
T Consensus 169 NaH~yhiNSiS~Ns-D~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~I 246 (460)
T COG5170 169 NAHPYHINSISFNS-DKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEI 246 (460)
T ss_pred ccceeEeeeeeecC-chheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcE
Confidence 45888899999998 66666654 5678999998765433222111111 111123688889999877888889999999
Q ss_pred EEEECCCCce------eE---------EecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCC
Q 046451 199 VVWDLKKQKP------VI---------SFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGH 263 (719)
Q Consensus 199 ~iwd~~~~~~------~~---------~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h 263 (719)
++.|++.... +. .+.......|..+.|+++|+ ++++-..- +|+|||++..+.+++++.-|
T Consensus 247 kl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngr-yIlsRdyl----tvkiwDvnm~k~pikTi~~h 321 (460)
T COG5170 247 KLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGR-YILSRDYL----TVKIWDVNMAKNPIKTIPMH 321 (460)
T ss_pred EehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCc-EEEEeccc----eEEEEecccccCCceeechH
Confidence 9999984321 11 01112346788999999984 45544444 79999999988888888655
Q ss_pred C------------CCe---eEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 264 T------------KGV---IAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 264 ~------------~~V---~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
. ..| ..+.||- |...+++|+..+..-||-+.
T Consensus 322 ~~l~~~l~d~YEnDaifdkFeisfSg-d~~~v~sgsy~NNfgiyp~~ 367 (460)
T COG5170 322 CDLMDELNDVYENDAIFDKFEISFSG-DDKHVLSGSYSNNFGIYPTD 367 (460)
T ss_pred HHHHHHHHhhhhccceeeeEEEEecC-Ccccccccccccceeeeccc
Confidence 3 222 3578887 77889999998888888643
No 308
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=98.58 E-value=4e-08 Score=104.90 Aligned_cols=211 Identities=17% Similarity=0.296 Sum_probs=142.1
Q ss_pred CCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEE
Q 046451 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLAS 141 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~las 141 (719)
.....+.|++|+-+.. ..+++.|..+|.|.+-.+.... . .-.....+|....++++|++.|.+.||.
T Consensus 54 sdtqy~kcva~~y~~d------~cIlavG~atG~I~l~s~r~~h----d---Ss~E~tp~~ar~Ct~lAwneLDtn~LAa 120 (783)
T KOG1008|consen 54 SDTQYVKCVASFYGND------RCILAVGSATGNISLLSVRHPH----D---SSAEVTPGYARPCTSLAWNELDTNHLAA 120 (783)
T ss_pred ccCCCceeehhhcCCc------hhhhhhccccCceEEeecCCcc----c---ccceecccccccccccccccccHHHHHh
Confidence 4456678888877652 1589999999999999875321 1 2233455678889999999988888888
Q ss_pred Ee----CCCcEEEEcCCCCCCCC-ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCC
Q 046451 142 GA----DDGEICIWDLSAPAEPS-HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESI 216 (719)
Q Consensus 142 gs----~dg~I~iwdl~~~~~~~-~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~ 216 (719)
|- .|..+.|||+.+.-..- .-..+.. +......+++|..+ .+++++|.....++++|++......... .
T Consensus 121 gldkhrnds~~~Iwdi~s~ltvPke~~~fs~---~~l~gqns~cwlrd-~klvlaGm~sr~~~ifdlRqs~~~~~sv--n 194 (783)
T KOG1008|consen 121 GLDKHRNDSSLKIWDINSLLTVPKESPLFSS---STLDGQNSVCWLRD-TKLVLAGMTSRSVHIFDLRQSLDSVSSV--N 194 (783)
T ss_pred hhhhhcccCCccceecccccCCCcccccccc---ccccCccccccccC-cchhhcccccchhhhhhhhhhhhhhhhh--h
Confidence 74 36779999998762211 0000111 13345668999855 5788889888899999998432222111 3
Q ss_pred CCceeEEEECCCCCcEEEEEeCCCCCCcEEEEe-cCCCCCceEEeeCCCC----CeeEEEeCCCCCCeEEEEeCC-CcEE
Q 046451 217 KRRCSVLQWNPDVATQLVVASDEDSSPALRLWD-MRNTMSPVKEFVGHTK----GVIAMSWCPNDSSYLLTCAKD-NRTI 290 (719)
Q Consensus 217 ~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwD-l~~~~~~~~~~~~h~~----~V~~v~~sp~d~~~l~sgs~D-g~I~ 290 (719)
...+..+..+|-...+++... |+ .|.+|| .++.+.++..+..... .+..++|+|....+++++..| ++|+
T Consensus 195 Tk~vqG~tVdp~~~nY~cs~~-dg---~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIr 270 (783)
T KOG1008|consen 195 TKYVQGITVDPFSPNYFCSNS-DG---DIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIR 270 (783)
T ss_pred hhhcccceecCCCCCceeccc-cC---ceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEE
Confidence 445667777885444565555 55 799999 6665555544432222 489999999666677777755 6899
Q ss_pred EEECC
Q 046451 291 CWDTV 295 (719)
Q Consensus 291 iwd~~ 295 (719)
+||+.
T Consensus 271 lydi~ 275 (783)
T KOG1008|consen 271 LYDIC 275 (783)
T ss_pred Eeccc
Confidence 99986
No 309
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.56 E-value=1.4e-05 Score=88.79 Aligned_cols=206 Identities=17% Similarity=0.187 Sum_probs=136.7
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCC-EEEEEEeCCCCCEEEEEeCCCc-----EEEEcCCCCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGP-VRGLEFNSFTPNLLASGADDGE-----ICIWDLSAPAE 158 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~-V~~l~fsp~~~~~lasgs~dg~-----I~iwdl~~~~~ 158 (719)
..++.|+.+|.|.+++-. . +.+..+..+... |..+-... +.++|++.+.|+. |+|||++..+.
T Consensus 36 ~~vvigt~~G~V~~Ln~s-------~---~~~~~fqa~~~siv~~L~~~~-~~~~L~sv~Ed~~~np~llkiw~lek~~~ 104 (933)
T KOG2114|consen 36 GSVVIGTADGRVVILNSS-------F---QLIRGFQAYEQSIVQFLYILN-KQNFLFSVGEDEQGNPVLLKIWDLEKVDK 104 (933)
T ss_pred ceEEEeeccccEEEeccc-------c---eeeehheecchhhhhHhhccc-CceEEEEEeecCCCCceEEEEecccccCC
Confidence 699999999999999842 2 455667777766 44443333 4568888777654 89999976532
Q ss_pred CC---cc---CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC---CCceeEEecCCCCCceeEEEECCCC
Q 046451 159 PS---HF---PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSESIKRRCSVLQWNPDV 229 (719)
Q Consensus 159 ~~---~~---~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~---~~~~~~~~~~~~~~~i~~l~~sp~g 229 (719)
.. .+ .............+.+++.+.+- ..+|+|-.||.|.++.=+ .......+....+..|+.+.+..++
T Consensus 105 n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l-~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~ 183 (933)
T KOG2114|consen 105 NNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDL-KTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDG 183 (933)
T ss_pred CCCcceeeeeeeeccCCCCCCCcceEEEEEccc-cEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCC
Confidence 21 11 00110111234578889998885 689999999999988421 1111223333578899999999999
Q ss_pred CcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec-CCCC
Q 046451 230 ATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP-AGTN 308 (719)
Q Consensus 230 ~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~-~h~~ 308 (719)
...+++++.. .|.+|.+.+..-....+..|...+.|..|++ ...-|+++ .+..|.+||......-..+. +|..
T Consensus 184 ~s~lFv~Tt~----~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~-~t~qfIca-~~e~l~fY~sd~~~~cfaf~~g~kk 257 (933)
T KOG2114|consen 184 KSVLFVATTE----QVMLYSLSGRTPSLKVLDNNGISLNCSSFSD-GTYQFICA-GSEFLYFYDSDGRGPCFAFEVGEKK 257 (933)
T ss_pred ceeEEEEecc----eeEEEEecCCCcceeeeccCCccceeeecCC-CCccEEEe-cCceEEEEcCCCcceeeeecCCCeE
Confidence 7756666665 5999999854312445777888899999987 33324444 35679999998766666676 6654
No 310
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.54 E-value=5.2e-07 Score=92.73 Aligned_cols=218 Identities=11% Similarity=0.036 Sum_probs=150.7
Q ss_pred ccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC-CCcEEE
Q 046451 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY-NGTTVV 200 (719)
Q Consensus 122 h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~-dg~I~i 200 (719)
|.+.|+.+.... .+++.+++.||.++.|.-.....+. +-.+...|...|.+++.+-++ .++.+.+. |..+++
T Consensus 8 hrd~i~hv~~tk--a~fiiqASlDGh~KFWkKs~isGvE----fVKhFraHL~~I~sl~~S~dg-~L~~Sv~d~Dhs~Kv 80 (558)
T KOG0882|consen 8 HRDVITHVFPTK--AKFIIQASLDGHKKFWKKSRISGVE----FVKHFRAHLGVILSLAVSYDG-WLFRSVEDPDHSVKV 80 (558)
T ss_pred ccceeeeEeeeh--hheEEeeecchhhhhcCCCCcccee----ehhhhHHHHHHHHhhhccccc-eeEeeccCcccceeE
Confidence 777787776654 6899999999999999755422222 222334567788899999886 57788677 999999
Q ss_pred EECCCCceeEEecCC-CCCceeEEEECCC-CCcEEEEEeCCCCCCcEEEEecCCCCCc-eEEeeCCCCCeeEEEeCCCCC
Q 046451 201 WDLKKQKPVISFSES-IKRRCSVLQWNPD-VATQLVVASDEDSSPALRLWDMRNTMSP-VKEFVGHTKGVIAMSWCPNDS 277 (719)
Q Consensus 201 wd~~~~~~~~~~~~~-~~~~i~~l~~sp~-g~~~l~~~s~d~~~~~I~lwDl~~~~~~-~~~~~~h~~~V~~v~~sp~d~ 277 (719)
+|+++-..+..+... ..+.+ ++..++. -...++++..+. +.+.++|-+..... ...-.-|..+|.++.+++ -+
T Consensus 81 fDvEn~DminmiKL~~lPg~a-~wv~skGd~~s~IAVs~~~s--g~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~q-a~ 156 (558)
T KOG0882|consen 81 FDVENFDMINMIKLVDLPGFA-EWVTSKGDKISLIAVSLFKS--GKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQ-AG 156 (558)
T ss_pred EEeeccchhhhcccccCCCce-EEecCCCCeeeeEEeecccC--CCcEEECCcCCcCccceecccccCceEEEEeec-cc
Confidence 999886655333311 11222 2222222 112344444443 48999998765533 344456999999999999 88
Q ss_pred CeEEEEeCCCcEEEEECCC------CeEEEEec---------CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 278 SYLLTCAKDNRTICWDTVS------GEIVSELP---------AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 278 ~~l~sgs~Dg~I~iwd~~~------~~~~~~l~---------~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
+.+++....|.|..|.... .+....++ -......++.|++++ ..+.+-+.|.+|+++++.++++
T Consensus 157 Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g-~qistl~~DrkVR~F~~KtGkl 235 (558)
T KOG0882|consen 157 DSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDG-AQISTLNPDRKVRGFVFKTGKL 235 (558)
T ss_pred cceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEcccc-CcccccCcccEEEEEEeccchh
Confidence 9999999999999998762 22222222 234567899999999 7888888999999999999999
Q ss_pred cccCCCCCC
Q 046451 343 YGVGDSNFS 351 (719)
Q Consensus 343 ~~~~~~~~~ 351 (719)
+...++...
T Consensus 236 vqeiDE~~t 244 (558)
T KOG0882|consen 236 VQEIDEVLT 244 (558)
T ss_pred hhhhhccch
Confidence 885554433
No 311
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.53 E-value=3.1e-05 Score=83.03 Aligned_cols=290 Identities=14% Similarity=0.146 Sum_probs=153.5
Q ss_pred cCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCc
Q 046451 16 APDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGS 95 (719)
Q Consensus 16 Spdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~ 95 (719)
|||+++++.......+. -.+..+.+.|||++.+..... ......+....|||+| +.|+... ++.
T Consensus 1 S~d~~~~l~~~~~~~~~-r~s~~~~y~i~d~~~~~~~~l------~~~~~~~~~~~~sP~g--------~~~~~v~-~~n 64 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQW-RHSFKGDYYIYDIETGEITPL------TPPPPKLQDAKWSPDG--------KYIAFVR-DNN 64 (353)
T ss_dssp -TTSSEEEEEEEEEEES-SSEEEEEEEEEETTTTEEEES------S-EETTBSEEEE-SSS--------TEEEEEE-TTE
T ss_pred CCCCCeEEEEECcEEee-eeccceeEEEEecCCCceEEC------cCCccccccceeecCC--------CeeEEEe-cCc
Confidence 79999988865533221 113345667888775432211 1125678899999998 5666664 678
Q ss_pred EEEEcCCccccC-CCCCCCCceeeeccc---------cCCEEEEEEeCCCCCEEEEEeCC-C------------------
Q 046451 96 IDIWNPLSLISS-GETGGNPLIAHLSRH---------KGPVRGLEFNSFTPNLLASGADD-G------------------ 146 (719)
Q Consensus 96 I~lwd~~~~~~~-~~~~~~~~~~~l~~h---------~~~V~~l~fsp~~~~~lasgs~d-g------------------ 146 (719)
|.+++....... -+..+...+ +.+- -+.-..+-||| |+++|+....| .
T Consensus 65 ly~~~~~~~~~~~lT~dg~~~i--~nG~~dwvyeEEv~~~~~~~~WSp-d~~~la~~~~d~~~v~~~~~~~~~~~~~~yp 141 (353)
T PF00930_consen 65 LYLRDLATGQETQLTTDGEPGI--YNGVPDWVYEEEVFDRRSAVWWSP-DSKYLAFLRFDEREVPEYPLPDYSPPDSQYP 141 (353)
T ss_dssp EEEESSTTSEEEESES--TTTE--EESB--HHHHHHTSSSSBSEEE-T-TSSEEEEEEEE-TTS-EEEEEEESSSTESS-
T ss_pred eEEEECCCCCeEEeccccceeE--EcCccceeccccccccccceEECC-CCCEEEEEEECCcCCceEEeeccCCccccCC
Confidence 999987322100 000000000 0000 11235688999 77777765322 1
Q ss_pred -----------------cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEE-EeCC---CcEEEEECCC
Q 046451 147 -----------------EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILAS-TSYN---GTTVVWDLKK 205 (719)
Q Consensus 147 -----------------~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s-~s~d---g~I~iwd~~~ 205 (719)
.+.|+|+.+++....- ...........+..+.|.+++..+++. .+.+ ..+.++|..+
T Consensus 142 ~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~--~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~t 219 (353)
T PF00930_consen 142 EVESIRYPKAGDPNPRVSLFVVDLASGKTTELD--PPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDAST 219 (353)
T ss_dssp EEEEEE--BTTS---EEEEEEEESSSTCCCEE-----HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECT
T ss_pred cccccccCCCCCcCCceEEEEEECCCCcEEEee--eccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCC
Confidence 2445666555442110 010001124478899999987423332 3333 3577788877
Q ss_pred CceeEEecCCCCCce---eEEEEC-CCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeE-EEeCCCCCCeE
Q 046451 206 QKPVISFSESIKRRC---SVLQWN-PDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIA-MSWCPNDSSYL 280 (719)
Q Consensus 206 ~~~~~~~~~~~~~~i---~~l~~s-p~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~-v~~sp~d~~~l 280 (719)
++....+.......| ..+.|. +++..++.....+| ...|.++|... ...+.+....-.|.. +.|+..++.++
T Consensus 220 g~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G-~~hly~~~~~~--~~~~~lT~G~~~V~~i~~~d~~~~~iy 296 (353)
T PF00930_consen 220 GETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDG-YRHLYLYDLDG--GKPRQLTSGDWEVTSILGWDEDNNRIY 296 (353)
T ss_dssp TTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTS-SEEEEEEETTS--SEEEESS-SSS-EEEEEEEECTSSEEE
T ss_pred CceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCC-CcEEEEEcccc--cceeccccCceeecccceEcCCCCEEE
Confidence 765444433233333 355554 77766666666555 34566666654 334556555566755 66777344555
Q ss_pred EEEeCCC----cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCC
Q 046451 281 LTCAKDN----RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFD 329 (719)
Q Consensus 281 ~sgs~Dg----~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~D 329 (719)
+++..++ .|..-++..+..+..+.........+.|||++..++.+++.-
T Consensus 297 f~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~s~~ 349 (353)
T PF00930_consen 297 FTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDTYSGP 349 (353)
T ss_dssp EEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEEEESS
T ss_pred EEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEEEcCC
Confidence 5666533 555667762344455555444336999999997777777643
No 312
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.47 E-value=8.4e-05 Score=74.82 Aligned_cols=216 Identities=16% Similarity=0.123 Sum_probs=128.6
Q ss_pred CCcEEEEcCCccccCCCCCCCCceeeeccc--cCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCC
Q 046451 93 DGSIDIWNPLSLISSGETGGNPLIAHLSRH--KGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGS 170 (719)
Q Consensus 93 dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h--~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~ 170 (719)
+|.|..||. .++ +.+.....- .....+..+ . ++.++++++.++.|+.||..+++....+.. ..
T Consensus 2 ~g~l~~~d~------~tG---~~~W~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~--- 66 (238)
T PF13360_consen 2 DGTLSALDP------RTG---KELWSYDLGPGIGGPVATAV-P-DGGRVYVASGDGNLYALDAKTGKVLWRFDL-PG--- 66 (238)
T ss_dssp TSEEEEEET------TTT---EEEEEEECSSSCSSEEETEE-E-ETTEEEEEETTSEEEEEETTTSEEEEEEEC-SS---
T ss_pred CCEEEEEEC------CCC---CEEEEEECCCCCCCccceEE-E-eCCEEEEEcCCCEEEEEECCCCCEEEEeec-cc---
Confidence 678888887 455 555555321 122222122 2 456777788999999999998876544321 11
Q ss_pred CCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEe-cCCC---C-CceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 171 AAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF-SESI---K-RRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 171 ~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~-~~~~---~-~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
.+.......+ ..+++++.++.|+.+|.++++.+..+ .... . .......+. + ..++++..++ .|
T Consensus 67 ----~~~~~~~~~~--~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~g---~l 134 (238)
T PF13360_consen 67 ----PISGAPVVDG--GRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVD--G-DRLYVGTSSG---KL 134 (238)
T ss_dssp ----CGGSGEEEET--TEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEE--T-TEEEEEETCS---EE
T ss_pred ----cccceeeecc--cccccccceeeeEecccCCcceeeeeccccccccccccccCceEe--c-CEEEEEeccC---cE
Confidence 1111012222 25666778889999999999998884 3111 1 111223333 4 3566666565 79
Q ss_pred EEEecCCCCCceEEeeCCCCC----------e-eEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeE
Q 046451 246 RLWDMRNTMSPVKEFVGHTKG----------V-IAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIH 314 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~~h~~~----------V-~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~ 314 (719)
..+|++++ +.+-........ + ..+.+. ++ .++.++.++.+..+|+.+++.+.+.. ...+..+
T Consensus 135 ~~~d~~tG-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~v~~~~~~g~~~~~d~~tg~~~w~~~--~~~~~~~- 207 (238)
T PF13360_consen 135 VALDPKTG-KLLWKYPVGEPRGSSPISSFSDINGSPVIS--DG-RVYVSSGDGRVVAVDLATGEKLWSKP--ISGIYSL- 207 (238)
T ss_dssp EEEETTTT-EEEEEEESSTT-SS--EEEETTEEEEEECC--TT-EEEEECCTSSEEEEETTTTEEEEEEC--SS-ECEC-
T ss_pred EEEecCCC-cEEEEeecCCCCCCcceeeecccccceEEE--CC-EEEEEcCCCeEEEEECCCCCEEEEec--CCCccCC-
Confidence 99999886 444444433311 1 233333 33 77778778864444999999775444 2223332
Q ss_pred EcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 315 WYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 315 ~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
...++ ..|+.++.++.|..||+.+++..
T Consensus 208 ~~~~~-~~l~~~~~~~~l~~~d~~tG~~~ 235 (238)
T PF13360_consen 208 PSVDG-GTLYVTSSDGRLYALDLKTGKVV 235 (238)
T ss_dssp EECCC-TEEEEEETTTEEEEEETTTTEEE
T ss_pred ceeeC-CEEEEEeCCCEEEEEECCCCCEE
Confidence 34455 46666668999999999998863
No 313
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.46 E-value=2e-05 Score=85.93 Aligned_cols=292 Identities=15% Similarity=0.159 Sum_probs=159.7
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.+..+|.=-+++-.++||+.|+..|.| .+|+-..+... .....+....+..+..+.+.
T Consensus 31 ~~~~~v~lTc~dst~~~l~~GsS~G~l----------yl~~R~~~~~~----~~~~~~~~~~~~~~~vs~~e-------- 88 (726)
T KOG3621|consen 31 FFPARVKLTCVDATEEYLAMGSSAGSV----------YLYNRHTGEMR----KLKNEGATGITCVRSVSSVE-------- 88 (726)
T ss_pred cCcceEEEEEeecCCceEEEecccceE----------EEEecCchhhh----cccccCccceEEEEEecchh--------
Confidence 344566666788889999999888876 55654432211 11111233444556667765
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec-cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCC-CCCCcc
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS-RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAP-AEPSHF 162 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~-~~~~~~ 162 (719)
.++|.|+..|.|.++-+..... .+. ..+..+. .|...|++++|++ ++..|++|...|+|....++.. ......
T Consensus 89 ~lvAagt~~g~V~v~ql~~~~p-~~~---~~~t~~d~~~~~rVTal~Ws~-~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~ 163 (726)
T KOG3621|consen 89 YLVAAGTASGRVSVFQLNKELP-RDL---DYVTPCDKSHKCRVTALEWSK-NGMKLYSGDSQGKVVLTELDSRQAFLSKS 163 (726)
T ss_pred HhhhhhcCCceEEeehhhccCC-Ccc---eeeccccccCCceEEEEEecc-cccEEeecCCCceEEEEEechhhhhcccc
Confidence 7899999999999999854221 111 2222222 3788999999999 8999999999999999888872 111110
Q ss_pred CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc--eeEEEECCC---CCcEEEEEe
Q 046451 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR--CSVLQWNPD---VATQLVVAS 237 (719)
Q Consensus 163 ~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~--i~~l~~sp~---g~~~l~~~s 237 (719)
.......+.|..|+.... .+|++... ...+++++.++ +..+-...... -...+|-+. +....+.++
T Consensus 164 ----q~il~~ds~IVQlD~~q~--~LLVStl~--r~~Lc~tE~et-i~QIG~k~R~~~~~~GACF~~g~~~~q~~~Iyca 234 (726)
T KOG3621|consen 164 ----QEILSEDSEIVQLDYLQS--YLLVSTLT--RCILCQTEAET-ITQIGKKPRKSLIDFGACFFPGQCKAQKPQIYCA 234 (726)
T ss_pred ----ceeeccCcceEEeecccc--eehHhhhh--hhheeecchhH-HHHhcCCCcCCccccceEEeeccccCCCceEEEe
Confidence 011123457777777654 35554433 34566666543 22221111111 233444443 234566666
Q ss_pred CCCCCCcEEEEecCCCCCceEEeeC-------------CCC-----------CeeEEEeCC---CCCCeEEEEeCCCcEE
Q 046451 238 DEDSSPALRLWDMRNTMSPVKEFVG-------------HTK-----------GVIAMSWCP---NDSSYLLTCAKDNRTI 290 (719)
Q Consensus 238 ~d~~~~~I~lwDl~~~~~~~~~~~~-------------h~~-----------~V~~v~~sp---~d~~~l~sgs~Dg~I~ 290 (719)
.-| .|+|..+-.++.+++..- +.. .-..+.|.. ..+..+++-++-| |+
T Consensus 235 RPG----~RlWead~~G~V~~Thqfk~ala~~p~p~i~~~s~esp~~~~~~~~~q~ls~~k~~~l~~~~vLa~te~G-iy 309 (726)
T KOG3621|consen 235 RPG----LRLWEADFAGEVIKTHQFKDALARPPAPEIPIRSLESPNQRSLPSGTQHLSLSKSSTLHSDRVLAWTEVG-IY 309 (726)
T ss_pred cCC----CceEEeecceeEEEeeehhhhhccCCCCcccCCCcCCccccCCCCCccccccceeEEeecceEEEeecce-EE
Confidence 665 788877543333333211 000 000111110 0223444444444 88
Q ss_pred EEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 291 CWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 291 iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
|+|.++...+.-..+.. .|.+++-+.+. |+.-..|+.+++..+.+..
T Consensus 310 v~d~~~~~v~l~se~~~-DI~dVs~~~ne---iFvL~~d~~l~~~sv~s~q 356 (726)
T KOG3621|consen 310 VFDSNNSQVYLWSEGGH-DILDVSHCGNE---IFVLNLDRGLKVESVASRQ 356 (726)
T ss_pred EEEeccceEEEeecCCC-ceeEEeecCce---EEEEecCCceeEEEeehhH
Confidence 88887666554443332 36666555432 3333446677777766654
No 314
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=98.43 E-value=1.3e-05 Score=88.30 Aligned_cols=115 Identities=19% Similarity=0.380 Sum_probs=85.9
Q ss_pred ceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEE
Q 046451 11 ASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGG 90 (719)
Q Consensus 11 ~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasg 90 (719)
+-.+|+|...++|+++..- ...+.+.||- ++++.... ....-.+++++|+|.. -+|+.|
T Consensus 19 ti~SWHPsePlfAVA~fS~------er~GSVtIfa-dtGEPqr~------Vt~P~hatSLCWHpe~--------~vLa~g 77 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSP------ERGGSVTIFA-DTGEPQRD------VTYPVHATSLCWHPEE--------FVLAQG 77 (1416)
T ss_pred cccccCCCCceeEEEEecC------CCCceEEEEe-cCCCCCcc------cccceehhhhccChHH--------HHHhhc
Confidence 3457999999999997543 3466777773 44443332 2234456789999986 688889
Q ss_pred cCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCC
Q 046451 91 LVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAP 156 (719)
Q Consensus 91 s~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~ 156 (719)
-.-|.+.+|...+ . +.-.....|...|..+.|++ +|..|+++..-|.|.+|.....
T Consensus 78 we~g~~~v~~~~~------~---e~htv~~th~a~i~~l~wS~-~G~~l~t~d~~g~v~lwr~d~~ 133 (1416)
T KOG3617|consen 78 WEMGVSDVQKTNT------T---ETHTVVETHPAPIQGLDWSH-DGTVLMTLDNPGSVHLWRYDVI 133 (1416)
T ss_pred cccceeEEEecCC------c---eeeeeccCCCCCceeEEecC-CCCeEEEcCCCceeEEEEeeec
Confidence 8999999999732 2 33334456999999999999 8999999999999999987643
No 315
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.43 E-value=4.1e-05 Score=83.10 Aligned_cols=199 Identities=17% Similarity=0.203 Sum_probs=122.7
Q ss_pred CceeeeccccCCEEEEEEeCCCCCEEEEE---eCC-CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEE
Q 046451 114 PLIAHLSRHKGPVRGLEFNSFTPNLLASG---ADD-GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHIL 189 (719)
Q Consensus 114 ~~~~~l~~h~~~V~~l~fsp~~~~~lasg---s~d-g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l 189 (719)
.....+..-...+..-+|++ ++..++.. ... ..++++|+++++...... ..+.-..-.|+|+|.+++
T Consensus 183 ~~~~~l~~~~~~~~~p~ws~-~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~--------~~g~~~~P~fspDG~~l~ 253 (425)
T COG0823 183 YNQQKLTDSGSLILTPAWSP-DGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN--------FNGNNGAPAFSPDGSKLA 253 (425)
T ss_pred cceeEecccCcceeccccCc-CCCceEEEEEecCCCceEEEEeccCCccceeec--------cCCccCCccCCCCCCEEE
Confidence 44444554556677788988 55544333 222 359999999887665431 222445678999998888
Q ss_pred EEEeCCCc--EEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCe
Q 046451 190 ASTSYNGT--TVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGV 267 (719)
Q Consensus 190 ~s~s~dg~--I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V 267 (719)
++...||. |+++|+.++. ...+. ...+.-..-.|+|||++++++ ++.++...|.++|+..... ..+......-
T Consensus 254 f~~~rdg~~~iy~~dl~~~~-~~~Lt-~~~gi~~~Ps~spdG~~ivf~-Sdr~G~p~I~~~~~~g~~~--~riT~~~~~~ 328 (425)
T COG0823 254 FSSSRDGSPDIYLMDLDGKN-LPRLT-NGFGINTSPSWSPDGSKIVFT-SDRGGRPQIYLYDLEGSQV--TRLTFSGGGN 328 (425)
T ss_pred EEECCCCCccEEEEcCCCCc-ceecc-cCCccccCccCCCCCCEEEEE-eCCCCCcceEEECCCCCce--eEeeccCCCC
Confidence 88888875 6666777666 33344 233333467899999765555 4444455788888865433 3333333333
Q ss_pred eEEEeCCCCCCeEEEEeC-CCc--EEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeC
Q 046451 268 IAMSWCPNDSSYLLTCAK-DNR--TICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSF 328 (719)
Q Consensus 268 ~~v~~sp~d~~~l~sgs~-Dg~--I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~ 328 (719)
..-.|+| ||++|+..+. +|. |.+.|+.++..+..+. +......-+|.+++..++.+.+.
T Consensus 329 ~~p~~Sp-dG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt-~~~~~e~ps~~~ng~~i~~~s~~ 390 (425)
T COG0823 329 SNPVWSP-DGDKIVFESSSGGQWDIDKNDLASGGKIRILT-STYLNESPSWAPNGRMIMFSSGQ 390 (425)
T ss_pred cCccCCC-CCCEEEEEeccCCceeeEEeccCCCCcEEEcc-ccccCCCCCcCCCCceEEEeccC
Confidence 3778999 8888877764 344 6777777666544443 33334566788888545444443
No 316
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.42 E-value=1.1e-05 Score=89.02 Aligned_cols=187 Identities=17% Similarity=0.269 Sum_probs=125.9
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
.+.++|++++ +++||.|+.+|.| .+++.+... ... +.|+.. ..+| .+
T Consensus 39 ~D~is~~av~--~~~~~~GtH~g~v----------~~~~~~~~~--~~~-----~~~s~~------~~~G--------ey 85 (846)
T KOG2066|consen 39 NDAISCCAVH--DKFFALGTHRGAV----------YLTTCQGNP--KTN-----FDHSSS------ILEG--------EY 85 (846)
T ss_pred hhHHHHHHhh--cceeeeccccceE----------EEEecCCcc--ccc-----cccccc------ccCC--------ce
Confidence 3556777776 6899999998877 566655332 111 122222 3344 69
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC----CCCEEEEEeCCCcEEEEcCCCCCCCCcc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF----TPNLLASGADDGEICIWDLSAPAEPSHF 162 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~----~~~~lasgs~dg~I~iwdl~~~~~~~~~ 162 (719)
+++|+.||.|.|-.+.+ . .....+. ....+.+++++|+ ..+.+++|+..| +.++.-+-......+
T Consensus 86 ~asCS~DGkv~I~sl~~------~---~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v 154 (846)
T KOG2066|consen 86 VASCSDDGKVVIGSLFT------D---DEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV 154 (846)
T ss_pred EEEecCCCcEEEeeccC------C---ccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce
Confidence 99999999999998843 2 2333232 4568899999984 256899999988 777754332222221
Q ss_pred CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCC-----CCceeEEEECCCCCcEEEEEe
Q 046451 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESI-----KRRCSVLQWNPDVATQLVVAS 237 (719)
Q Consensus 163 ~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~-----~~~i~~l~~sp~g~~~l~~~s 237 (719)
......+.|.++.|.. ++++-++.+| |++||+.+++.+..+...+ ...-..+.|.++. .++.|-
T Consensus 155 -----~l~~~eG~I~~i~W~g---~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~--~LVIGW 223 (846)
T KOG2066|consen 155 -----VLSEGEGPIHSIKWRG---NLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDED--RLVIGW 223 (846)
T ss_pred -----eeecCccceEEEEecC---cEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCC--eEEEec
Confidence 1233567999999974 4788888777 8999999988887776422 1223457788774 688888
Q ss_pred CCCCCCcEEEEecCC
Q 046451 238 DEDSSPALRLWDMRN 252 (719)
Q Consensus 238 ~d~~~~~I~lwDl~~ 252 (719)
.| +|+|..++.
T Consensus 224 ~d----~v~i~~I~~ 234 (846)
T KOG2066|consen 224 GD----SVKICSIKK 234 (846)
T ss_pred CC----eEEEEEEec
Confidence 88 599999873
No 317
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.38 E-value=1e-05 Score=89.25 Aligned_cols=186 Identities=15% Similarity=0.246 Sum_probs=134.1
Q ss_pred cCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEE
Q 046451 123 KGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWD 202 (719)
Q Consensus 123 ~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd 202 (719)
.+.+.|++++ .++|+-|+.+|.|++++....- ...+ .|... +.+| .++++|+.||+|.|..
T Consensus 39 ~D~is~~av~---~~~~~~GtH~g~v~~~~~~~~~-~~~~--------~~s~~------~~~G-ey~asCS~DGkv~I~s 99 (846)
T KOG2066|consen 39 NDAISCCAVH---DKFFALGTHRGAVYLTTCQGNP-KTNF--------DHSSS------ILEG-EYVASCSDDGKVVIGS 99 (846)
T ss_pred hhHHHHHHhh---cceeeeccccceEEEEecCCcc-cccc--------ccccc------ccCC-ceEEEecCCCcEEEee
Confidence 4567777774 5899999999999999977543 1111 12211 4555 5999999999999999
Q ss_pred CCCCceeEEecCCCCCceeEEEECCC----CCcEEEEEeCCCCCCcEEEEecCCCCCc-eEEeeCCCCCeeEEEeCCCCC
Q 046451 203 LKKQKPVISFSESIKRRCSVLQWNPD----VATQLVVASDEDSSPALRLWDMRNTMSP-VKEFVGHTKGVIAMSWCPNDS 277 (719)
Q Consensus 203 ~~~~~~~~~~~~~~~~~i~~l~~sp~----g~~~l~~~s~d~~~~~I~lwDl~~~~~~-~~~~~~h~~~V~~v~~sp~d~ 277 (719)
+-+.+...++. ....+.+|+++|+ ....+++|+..| +.++.-+-.+.. -..+....+.|.+++|. |
T Consensus 100 l~~~~~~~~~d--f~rpiksial~Pd~~~~~sk~fv~GG~ag----lvL~er~wlgnk~~v~l~~~eG~I~~i~W~---g 170 (846)
T KOG2066|consen 100 LFTDDEITQYD--FKRPIKSIALHPDFSRQQSKQFVSGGMAG----LVLSERNWLGNKDSVVLSEGEGPIHSIKWR---G 170 (846)
T ss_pred ccCCccceeEe--cCCcceeEEeccchhhhhhhheeecCcce----EEEehhhhhcCccceeeecCccceEEEEec---C
Confidence 99998888887 7889999999998 245688888775 777764321111 12355567899999994 6
Q ss_pred CeEEEEeCCCcEEEEECCCCeEEEEecCCCC------CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 046451 278 SYLLTCAKDNRTICWDTVSGEIVSELPAGTN------WNFDIHWYPKIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 278 ~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~------~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~ 340 (719)
++||-++.+| |+|||+.+++.+..+.-... .-..+.|.++. .|+-| +..+|+|..+..+
T Consensus 171 ~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~--~LVIG-W~d~v~i~~I~~~ 235 (846)
T KOG2066|consen 171 NLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDED--RLVIG-WGDSVKICSIKKR 235 (846)
T ss_pred cEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCC--eEEEe-cCCeEEEEEEecc
Confidence 8888887776 89999999988877754322 23467898876 44444 4568999988843
No 318
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.36 E-value=0.00019 Score=72.88 Aligned_cols=218 Identities=14% Similarity=0.133 Sum_probs=126.4
Q ss_pred eEEEcC-CCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeec-CCCCCCCCCccceEEE
Q 046451 12 SVAFAP-DAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWG-KNGSGSEDFSLGLVAG 89 (719)
Q Consensus 12 ~vafSp-dg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~s-p~g~~~~~~~~~~las 89 (719)
++.|.+ +|.++++-...+.| ..|+...+.. .. ..... ...+++. +++ .|+.
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i----------~~~~~~~~~~--~~-----~~~~~-~~G~~~~~~~g---------~l~v 56 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRI----------YRVDPDTGEV--EV-----IDLPG-PNGMAFDRPDG---------RLYV 56 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEE----------EEEETTTTEE--EE-----EESSS-EEEEEEECTTS---------EEEE
T ss_pred ceEEECCCCEEEEEEcCCCEE----------EEEECCCCeE--EE-----EecCC-CceEEEEccCC---------EEEE
Confidence 568888 66666665444433 4455443221 11 11112 6677777 554 4555
Q ss_pred EcCCCcEEEEcCCccccCCCCCCCCceeeec--c-ccCCEEEEEEeCCCCCEEEEEeCC--------CcEEEEcCCCCCC
Q 046451 90 GLVDGSIDIWNPLSLISSGETGGNPLIAHLS--R-HKGPVRGLEFNSFTPNLLASGADD--------GEICIWDLSAPAE 158 (719)
Q Consensus 90 gs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~--~-h~~~V~~l~fsp~~~~~lasgs~d--------g~I~iwdl~~~~~ 158 (719)
+..+ .+.++|+. ++ ....+.... . .....+++++.+ ++++.++.... |.|..++.. ++.
T Consensus 57 ~~~~-~~~~~d~~------~g-~~~~~~~~~~~~~~~~~~ND~~vd~-~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~ 126 (246)
T PF08450_consen 57 ADSG-GIAVVDPD------TG-KVTVLADLPDGGVPFNRPNDVAVDP-DGNLYVTDSGGGGASGIDPGSVYRIDPD-GKV 126 (246)
T ss_dssp EETT-CEEEEETT------TT-EEEEEEEEETTCSCTEEEEEEEE-T-TS-EEEEEECCBCTTCGGSEEEEEEETT-SEE
T ss_pred EEcC-ceEEEecC------CC-cEEEEeeccCCCcccCCCceEEEcC-CCCEEEEecCCCccccccccceEEECCC-CeE
Confidence 5544 45556873 22 002222221 1 345678999999 77877776544 457777766 332
Q ss_pred CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce-------eEEecCCCCCceeEEEECCCCCc
Q 046451 159 PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP-------VISFSESIKRRCSVLQWNPDVAT 231 (719)
Q Consensus 159 ~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~-------~~~~~~~~~~~i~~l~~sp~g~~ 231 (719)
... .. .-...+.|+|++++..++++-+..+.|..+++..... ...+. ........++++.+| +
T Consensus 127 ~~~---~~-----~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~g~pDG~~vD~~G-~ 196 (246)
T PF08450_consen 127 TVV---AD-----GLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFP-GGPGYPDGLAVDSDG-N 196 (246)
T ss_dssp EEE---EE-----EESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-S-SSSCEEEEEEEBTTS--
T ss_pred EEE---ec-----CcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcC-CCCcCCCcceEcCCC-C
Confidence 111 11 1225789999999866666778889999999864322 11222 222357889999998 4
Q ss_pred EEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeC-CCCCCeEEE
Q 046451 232 QLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWC-PNDSSYLLT 282 (719)
Q Consensus 232 ~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~s-p~d~~~l~s 282 (719)
++++....+ .|.++|.+ .+.+..+......+++++|. + +.+.|+.
T Consensus 197 l~va~~~~~---~I~~~~p~--G~~~~~i~~p~~~~t~~~fgg~-~~~~L~v 242 (246)
T PF08450_consen 197 LWVADWGGG---RIVVFDPD--GKLLREIELPVPRPTNCAFGGP-DGKTLYV 242 (246)
T ss_dssp EEEEEETTT---EEEEEETT--SCEEEEEE-SSSSEEEEEEEST-TSSEEEE
T ss_pred EEEEEcCCC---EEEEECCC--ccEEEEEcCCCCCEEEEEEECC-CCCEEEE
Confidence 666665555 89999986 35666666555689999995 4 5444443
No 319
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.35 E-value=7.6e-06 Score=91.12 Aligned_cols=181 Identities=17% Similarity=0.218 Sum_probs=130.3
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
..++.|+.-..+..+|+. +. +..+......+.|.-++. ++++|++|...|+|.+-|.++.+.+.++
T Consensus 148 ~~~i~Gg~Q~~li~~Dl~------~~---~e~r~~~v~a~~v~imR~---Nnr~lf~G~t~G~V~LrD~~s~~~iht~-- 213 (1118)
T KOG1275|consen 148 STLIMGGLQEKLIHIDLN------TE---KETRTTNVSASGVTIMRY---NNRNLFCGDTRGTVFLRDPNSFETIHTF-- 213 (1118)
T ss_pred cceeecchhhheeeeecc------cc---eeeeeeeccCCceEEEEe---cCcEEEeecccceEEeecCCcCceeeee--
Confidence 345555555567777773 23 334444434445666665 5689999999999999999998877664
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeC---------CCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEE
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSY---------NGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVV 235 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~---------dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~ 235 (719)
..|.+.|.+++.. | ++|++|+. |..|+|||+|.-+.+.-+. ....-.-+.|+|.-...+++
T Consensus 214 -----~aHs~siSDfDv~--G-NlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~--~~~~P~flrf~Psl~t~~~V 283 (1118)
T KOG1275|consen 214 -----DAHSGSISDFDVQ--G-NLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQ--FPYGPQFLRFHPSLTTRLAV 283 (1118)
T ss_pred -----eccccceeeeecc--C-CeEEEeecccccccccccchhhhhhhhhhhccCCcc--cccCchhhhhcccccceEEE
Confidence 4577888877765 3 57888775 4568999999887776655 22233567899988788888
Q ss_pred EeCCCCCCcEEEEe---cCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEE
Q 046451 236 ASDEDSSPALRLWD---MRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293 (719)
Q Consensus 236 ~s~d~~~~~I~lwD---l~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd 293 (719)
++..| ...+-| +.+...-+..+......+..+++++ +++.++.|..+|.|.+|.
T Consensus 284 ~S~sG---q~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSs-n~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 284 TSQSG---QFQFVDTATLSNPPAGVKMVNPNGSGISAFDISS-NGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred Eeccc---ceeeccccccCCCccceeEEccCCCcceeEEecC-CCceEEEecccCcEeeec
Confidence 88887 899999 4333222333444456799999999 999999999999999996
No 320
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.33 E-value=0.00037 Score=70.83 Aligned_cols=238 Identities=13% Similarity=0.141 Sum_probs=141.1
Q ss_pred CccceEEEcC-CCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 8 NRSASVAFAP-DAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 8 ~~V~~vafSp-dg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
.+...++.+| ++..+|.+-.-|.. +.+||...+.....+.. .....-.-.-.||+|| ++
T Consensus 5 ~RgH~~a~~p~~~~avafaRRPG~~---------~~v~D~~~g~~~~~~~a---~~gRHFyGHg~fs~dG--------~~ 64 (305)
T PF07433_consen 5 ARGHGVAAHPTRPEAVAFARRPGTF---------ALVFDCRTGQLLQRLWA---PPGRHFYGHGVFSPDG--------RL 64 (305)
T ss_pred ccccceeeCCCCCeEEEEEeCCCcE---------EEEEEcCCCceeeEEcC---CCCCEEecCEEEcCCC--------CE
Confidence 4667889999 56777888776654 46888876654443311 1111111246799998 67
Q ss_pred EEEEcC-----CCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEe------------------
Q 046451 87 VAGGLV-----DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA------------------ 143 (719)
Q Consensus 87 lasgs~-----dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs------------------ 143 (719)
|++.-. .|.|-|||.. .+...+..+..|--.-..+.+.+ |++.|+++-
T Consensus 65 LytTEnd~~~g~G~IgVyd~~--------~~~~ri~E~~s~GIGPHel~l~p-DG~tLvVANGGI~Thpd~GR~kLNl~t 135 (305)
T PF07433_consen 65 LYTTENDYETGRGVIGVYDAA--------RGYRRIGEFPSHGIGPHELLLMP-DGETLVVANGGIETHPDSGRAKLNLDT 135 (305)
T ss_pred EEEeccccCCCcEEEEEEECc--------CCcEEEeEecCCCcChhhEEEcC-CCCEEEEEcCCCccCcccCceecChhh
Confidence 777543 4889999984 12266677777766667888999 777777652
Q ss_pred CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCc-------EEEEECCCCceeEEecC--
Q 046451 144 DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGT-------TVVWDLKKQKPVISFSE-- 214 (719)
Q Consensus 144 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~-------I~iwd~~~~~~~~~~~~-- 214 (719)
.+-.|...|..+++.+... ......|.-.|..+++..+|. .++..-..|. |.+++ .++.+..+..
T Consensus 136 M~psL~~ld~~sG~ll~q~---~Lp~~~~~lSiRHLa~~~~G~-V~~a~Q~qg~~~~~~PLva~~~--~g~~~~~~~~p~ 209 (305)
T PF07433_consen 136 MQPSLVYLDARSGALLEQV---ELPPDLHQLSIRHLAVDGDGT-VAFAMQYQGDPGDAPPLVALHR--RGGALRLLPAPE 209 (305)
T ss_pred cCCceEEEecCCCceeeee---ecCccccccceeeEEecCCCc-EEEEEecCCCCCccCCeEEEEc--CCCcceeccCCh
Confidence 1223444555565544331 111133566899999999973 4444333332 33333 2332222221
Q ss_pred ----CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcE
Q 046451 215 ----SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRT 289 (719)
Q Consensus 215 ----~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I 289 (719)
.....+-+|+++.++..+.+++-..+ .+.+||..++ ..+... .-..+..++-.. ++ ++++.+ .|.+
T Consensus 210 ~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg---~~~~~d~~tg-~~~~~~--~l~D~cGva~~~-~~-f~~ssG-~G~~ 279 (305)
T PF07433_consen 210 EQWRRLNGYIGSIAADRDGRLIAVTSPRGG---RVAVWDAATG-RLLGSV--PLPDACGVAPTD-DG-FLVSSG-QGQL 279 (305)
T ss_pred HHHHhhCCceEEEEEeCCCCEEEEECCCCC---EEEEEECCCC-CEeecc--ccCceeeeeecC-Cc-eEEeCC-CccE
Confidence 34578899999999865445555444 9999999875 333322 223455666655 43 555544 4443
No 321
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.31 E-value=7.9e-06 Score=90.99 Aligned_cols=185 Identities=12% Similarity=0.148 Sum_probs=133.8
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC
Q 046451 135 TPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE 214 (719)
Q Consensus 135 ~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~ 214 (719)
++..++.|+....+..+|+++.+..+... -..+.|.-++.+ .+++.+|...|+|.+-|.++.+.+.++.
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~-------v~a~~v~imR~N---nr~lf~G~t~G~V~LrD~~s~~~iht~~- 214 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTN-------VSASGVTIMRYN---NRNLFCGDTRGTVFLRDPNSFETIHTFD- 214 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeee-------ccCCceEEEEec---CcEEEeecccceEEeecCCcCceeeeee-
Confidence 45677888888888899999877654421 112245555543 3589999999999999999999999999
Q ss_pred CCCCceeEEEECCCCCcEEEEEeCCCC------CCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCc
Q 046451 215 SIKRRCSVLQWNPDVATQLVVASDEDS------SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR 288 (719)
Q Consensus 215 ~~~~~i~~l~~sp~g~~~l~~~s~d~~------~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~ 288 (719)
.|.+.|..++.. | ++|++++...+ +..|+|||+|+-+. +.-+.-+.+. .-+.|.|.-...+++++..|.
T Consensus 215 aHs~siSDfDv~--G-NlLitCG~S~R~~~l~~D~FvkVYDLRmmra-l~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq 289 (1118)
T KOG1275|consen 215 AHSGSISDFDVQ--G-NLLITCGYSMRRYNLAMDPFVKVYDLRMMRA-LSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQ 289 (1118)
T ss_pred ccccceeeeecc--C-CeEEEeecccccccccccchhhhhhhhhhhc-cCCcccccCc-hhhhhcccccceEEEEecccc
Confidence 899999877666 4 36777776553 34789999987532 2222223222 456788866678999999999
Q ss_pred EEEEECCCC-e---EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEe
Q 046451 289 TICWDTVSG-E---IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336 (719)
Q Consensus 289 I~iwd~~~~-~---~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd 336 (719)
..+-|..+. + -+.-+.-....+..+++++++ ..++.|..+|.|.+|.
T Consensus 290 ~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~-~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 290 FQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNG-DALAFGDHEGHVNLWA 340 (1118)
T ss_pred eeeccccccCCCccceeEEccCCCcceeEEecCCC-ceEEEecccCcEeeec
Confidence 999994321 1 122233334459999999999 8999999999999998
No 322
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.29 E-value=0.00019 Score=72.92 Aligned_cols=208 Identities=15% Similarity=0.126 Sum_probs=138.1
Q ss_pred EEEEEEeCCCCCEEEEEeCCCc-EEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe-----CCCcEE
Q 046451 126 VRGLEFNSFTPNLLASGADDGE-ICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS-----YNGTTV 199 (719)
Q Consensus 126 V~~l~fsp~~~~~lasgs~dg~-I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s-----~dg~I~ 199 (719)
...++.+|.+...++.+-.-|+ ..+||..+++....+..-.. .| ..-.-.|+++|. +|++.- ..|.|-
T Consensus 7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~g---RH--FyGHg~fs~dG~-~LytTEnd~~~g~G~Ig 80 (305)
T PF07433_consen 7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPG---RH--FYGHGVFSPDGR-LLYTTENDYETGRGVIG 80 (305)
T ss_pred ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCC---CE--EecCEEEcCCCC-EEEEeccccCCCcEEEE
Confidence 3467777866667777777664 67899998887665422111 11 222567999985 555543 358999
Q ss_pred EEECC-CCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCC--------------CCCcEEEEecCCCCCceEE--e--
Q 046451 200 VWDLK-KQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED--------------SSPALRLWDMRNTMSPVKE--F-- 260 (719)
Q Consensus 200 iwd~~-~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~--------------~~~~I~lwDl~~~~~~~~~--~-- 260 (719)
|||.. +.+.+.++. .+.-.-..+.+.+||+++++.-+.-. -..+|.+.|.+++ +.+.. +
T Consensus 81 Vyd~~~~~~ri~E~~-s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG-~ll~q~~Lp~ 158 (305)
T PF07433_consen 81 VYDAARGYRRIGEFP-SHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSG-ALLEQVELPP 158 (305)
T ss_pred EEECcCCcEEEeEec-CCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCC-ceeeeeecCc
Confidence 99999 667788887 67777788999999965444332211 0235666666665 33433 4
Q ss_pred eCCCCCeeEEEeCCCCCCeEEEEeCCCc-------EEEEECCCCeEEEEec-------CCCCCeEEeEEcCCCCCEEEEE
Q 046451 261 VGHTKGVIAMSWCPNDSSYLLTCAKDNR-------TICWDTVSGEIVSELP-------AGTNWNFDIHWYPKIPGVISAS 326 (719)
Q Consensus 261 ~~h~~~V~~v~~sp~d~~~l~sgs~Dg~-------I~iwd~~~~~~~~~l~-------~h~~~v~~l~~spdg~~~las~ 326 (719)
..|...|..+++.. ++..++..-..|. |-+++. ++.+..+. .-.+.|-+|+++.++..+++|+
T Consensus 159 ~~~~lSiRHLa~~~-~G~V~~a~Q~qg~~~~~~PLva~~~~--g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~ts 235 (305)
T PF07433_consen 159 DLHQLSIRHLAVDG-DGTVAFAMQYQGDPGDAPPLVALHRR--GGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTS 235 (305)
T ss_pred cccccceeeEEecC-CCcEEEEEecCCCCCccCCeEEEEcC--CCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEEC
Confidence 34777899999998 7777666654442 334433 33233232 2346799999999995566777
Q ss_pred eCCCcEEEEeCCCCcccc
Q 046451 327 SFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 327 s~Dg~I~iwd~~~~~~~~ 344 (719)
=..+.+.+||..+++.+.
T Consensus 236 PrGg~~~~~d~~tg~~~~ 253 (305)
T PF07433_consen 236 PRGGRVAVWDAATGRLLG 253 (305)
T ss_pred CCCCEEEEEECCCCCEee
Confidence 778999999999999876
No 323
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.29 E-value=0.00016 Score=72.82 Aligned_cols=190 Identities=17% Similarity=0.155 Sum_probs=113.7
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
+.+++++.++.|..||. .++ +.+..+.. .+.+...... .+..+++++.++.|+.+|..+++....+..
T Consensus 37 ~~v~~~~~~~~l~~~d~------~tG---~~~W~~~~-~~~~~~~~~~--~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~ 104 (238)
T PF13360_consen 37 GRVYVASGDGNLYALDA------KTG---KVLWRFDL-PGPISGAPVV--DGGRVYVGTSDGSLYALDAKTGKVLWSIYL 104 (238)
T ss_dssp TEEEEEETTSEEEEEET------TTS---EEEEEEEC-SSCGGSGEEE--ETTEEEEEETTSEEEEEETTTSCEEEEEEE
T ss_pred CEEEEEcCCCEEEEEEC------CCC---CEEEEeec-cccccceeee--cccccccccceeeeEecccCCcceeeeecc
Confidence 47777789999999998 556 66655554 2222222222 346677777888999999998887654200
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc----------e-eEEEECCCCCcEE
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR----------C-SVLQWNPDVATQL 233 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~----------i-~~l~~sp~g~~~l 233 (719)
... ............+. + ..++++..++.|+.+|+++|+.+..... .... + ..+.+. ++ .+
T Consensus 105 ~~~-~~~~~~~~~~~~~~--~-~~~~~~~~~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~--~v 176 (238)
T PF13360_consen 105 TSS-PPAGVRSSSSPAVD--G-DRLYVGTSSGKLVALDPKTGKLLWKYPV-GEPRGSSPISSFSDINGSPVIS-DG--RV 176 (238)
T ss_dssp -SS-CTCSTB--SEEEEE--T-TEEEEEETCSEEEEEETTTTEEEEEEES-STT-SS--EEEETTEEEEEECC-TT--EE
T ss_pred ccc-cccccccccCceEe--c-CEEEEEeccCcEEEEecCCCcEEEEeec-CCCCCCcceeeecccccceEEE-CC--EE
Confidence 000 00000111223333 3 4778888899999999999999888763 2211 1 223333 33 45
Q ss_pred EEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEE
Q 046451 234 VVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSE 302 (719)
Q Consensus 234 ~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~ 302 (719)
+.+..++. .+.+ |++++.. +-... ...+..+ ... ++..|++++.++.|.+||+++|+.+..
T Consensus 177 ~~~~~~g~--~~~~-d~~tg~~-~w~~~--~~~~~~~-~~~-~~~~l~~~~~~~~l~~~d~~tG~~~W~ 237 (238)
T PF13360_consen 177 YVSSGDGR--VVAV-DLATGEK-LWSKP--ISGIYSL-PSV-DGGTLYVTSSDGRLYALDLKTGKVVWQ 237 (238)
T ss_dssp EEECCTSS--EEEE-ETTTTEE-EEEEC--SS-ECEC-EEC-CCTEEEEEETTTEEEEEETTTTEEEEE
T ss_pred EEEcCCCe--EEEE-ECCCCCE-EEEec--CCCccCC-cee-eCCEEEEEeCCCEEEEEECCCCCEEeE
Confidence 55555541 3555 9987642 22222 2333332 233 567777777999999999999998754
No 324
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.27 E-value=2.5e-06 Score=59.12 Aligned_cols=39 Identities=23% Similarity=0.445 Sum_probs=36.7
Q ss_pred CeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEe
Q 046451 297 GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336 (719)
Q Consensus 297 ~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd 336 (719)
|+++.++.+|.+.|++|+|++++ .+|++++.|+.|+|||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~-~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDG-NFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTS-SEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEeccc-ccceeeCCCCEEEEEC
Confidence 46789999999999999999998 8999999999999997
No 325
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.23 E-value=9.9e-05 Score=80.68 Aligned_cols=148 Identities=16% Similarity=0.171 Sum_probs=97.9
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
.+|+.|+..|.+++|+-.. + ........+..+.+..+..+. +..++|.|+..|.|.|+-++..... ....
T Consensus 46 ~~l~~GsS~G~lyl~~R~~------~--~~~~~~~~~~~~~~~~~~vs~-~e~lvAagt~~g~V~v~ql~~~~p~-~~~~ 115 (726)
T KOG3621|consen 46 EYLAMGSSAGSVYLYNRHT------G--EMRKLKNEGATGITCVRSVSS-VEYLVAAGTASGRVSVFQLNKELPR-DLDY 115 (726)
T ss_pred ceEEEecccceEEEEecCc------h--hhhcccccCccceEEEEEecc-hhHhhhhhcCCceEEeehhhccCCC-ccee
Confidence 6999999999999999632 2 122222233455666667777 6788999999999999988874332 2211
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc----eeEEecCCCCCceeEEEECCCCCcEEEEEeCCC
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK----PVISFSESIKRRCSVLQWNPDVATQLVVASDED 240 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~----~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~ 240 (719)
+......|...|++++|+.++ ..|++|...|+|.+-.+.... ....+. ...+.|..|++... ++|++....
T Consensus 116 ~t~~d~~~~~rVTal~Ws~~~-~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il-~~ds~IVQlD~~q~--~LLVStl~r- 190 (726)
T KOG3621|consen 116 VTPCDKSHKCRVTALEWSKNG-MKLYSGDSQGKVVLTELDSRQAFLSKSQEIL-SEDSEIVQLDYLQS--YLLVSTLTR- 190 (726)
T ss_pred eccccccCCceEEEEEecccc-cEEeecCCCceEEEEEechhhhhccccceee-ccCcceEEeecccc--eehHhhhhh-
Confidence 333444578899999999997 689999999999998887721 111222 35566777766633 344444332
Q ss_pred CCCcEEEEecC
Q 046451 241 SSPALRLWDMR 251 (719)
Q Consensus 241 ~~~~I~lwDl~ 251 (719)
..+++.+
T Consensus 191 ----~~Lc~tE 197 (726)
T KOG3621|consen 191 ----CILCQTE 197 (726)
T ss_pred ----hheeecc
Confidence 4455554
No 326
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.23 E-value=0.00035 Score=78.06 Aligned_cols=215 Identities=13% Similarity=0.188 Sum_probs=130.0
Q ss_pred EEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcC
Q 046451 13 VAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLV 92 (719)
Q Consensus 13 vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~ 92 (719)
-+|++.+..+|.|+.+|.| |-++..-.. ......+...|-..-|.-++. .+|++.+.
T Consensus 29 sc~~s~~~~vvigt~~G~V------------~~Ln~s~~~----~~~fqa~~~siv~~L~~~~~~-------~~L~sv~E 85 (933)
T KOG2114|consen 29 SCCSSSTGSVVIGTADGRV------------VILNSSFQL----IRGFQAYEQSIVQFLYILNKQ-------NFLFSVGE 85 (933)
T ss_pred eEEcCCCceEEEeeccccE------------EEeccccee----eehheecchhhhhHhhcccCc-------eEEEEEee
Confidence 3588899999999999966 333321111 011122333333333444432 57777666
Q ss_pred CC-----cEEEEcCCccccCCCCCCCCce--eeecc-----ccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCC--CCCC
Q 046451 93 DG-----SIDIWNPLSLISSGETGGNPLI--AHLSR-----HKGPVRGLEFNSFTPNLLASGADDGEICIWDLS--APAE 158 (719)
Q Consensus 93 dg-----~I~lwd~~~~~~~~~~~~~~~~--~~l~~-----h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~--~~~~ 158 (719)
|+ .|+||+++....+.. ..++ ..+.. ....+.+++.+. +-+.+|+|-.||.|..+.-+ ..+.
T Consensus 86 d~~~np~llkiw~lek~~~n~s---P~c~~~~ri~~~~np~~~~p~s~l~Vs~-~l~~Iv~Gf~nG~V~~~~GDi~RDrg 161 (933)
T KOG2114|consen 86 DEQGNPVLLKIWDLEKVDKNNS---PQCLYEHRIFTIKNPTNPSPASSLAVSE-DLKTIVCGFTNGLVICYKGDILRDRG 161 (933)
T ss_pred cCCCCceEEEEecccccCCCCC---cceeeeeeeeccCCCCCCCcceEEEEEc-cccEEEEEecCcEEEEEcCcchhccc
Confidence 64 489999976432111 2444 12222 245688899988 67899999999999988432 2222
Q ss_pred CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeC
Q 046451 159 PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASD 238 (719)
Q Consensus 159 ~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~ 238 (719)
.+.. . ....++.|+.+.+..++...+.+++ -..|.+|.+....+.......++..+.|..+++.. ..+++++.
T Consensus 162 sr~~--~---~~~~~~pITgL~~~~d~~s~lFv~T-t~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t-~qfIca~~ 234 (933)
T KOG2114|consen 162 SRQD--Y---SHRGKEPITGLALRSDGKSVLFVAT-TEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGT-YQFICAGS 234 (933)
T ss_pred ccee--e---eccCCCCceeeEEecCCceeEEEEe-cceeEEEEecCCCcceeeeccCCccceeeecCCCC-ccEEEecC
Confidence 1111 1 1123568999999998865333333 34689999985553444233788889999998775 45777776
Q ss_pred CCCCCcEEEEecCCCCCceEEee-CCCCC
Q 046451 239 EDSSPALRLWDMRNTMSPVKEFV-GHTKG 266 (719)
Q Consensus 239 d~~~~~I~lwDl~~~~~~~~~~~-~h~~~ 266 (719)
. .|.+||.... .+...+. +|...
T Consensus 235 e----~l~fY~sd~~-~~cfaf~~g~kk~ 258 (933)
T KOG2114|consen 235 E----FLYFYDSDGR-GPCFAFEVGEKKE 258 (933)
T ss_pred c----eEEEEcCCCc-ceeeeecCCCeEE
Confidence 6 4999998643 3344444 55443
No 327
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.21 E-value=0.00071 Score=70.89 Aligned_cols=286 Identities=11% Similarity=0.038 Sum_probs=131.3
Q ss_pred ceEEEcCCCCeEEEe-eccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 11 ASVAFAPDAPYMAAG-TMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 11 ~~vafSpdg~~Latg-s~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
+.=+|..||+.|+.+ ..+| ...+.+.|+++++..+ +.... ........+++++ +.|+-
T Consensus 39 ~~~~ft~dG~kllF~s~~dg--------~~nly~lDL~t~~i~Q----LTdg~-g~~~~g~~~s~~~--------~~~~Y 97 (386)
T PF14583_consen 39 YQNCFTDDGRKLLFASDFDG--------NRNLYLLDLATGEITQ----LTDGP-GDNTFGGFLSPDD--------RALYY 97 (386)
T ss_dssp TS--B-TTS-EEEEEE-TTS--------S-EEEEEETTT-EEEE-------SS--B-TTT-EE-TTS--------SEEEE
T ss_pred cCCCcCCCCCEEEEEeccCC--------CcceEEEEcccCEEEE----CccCC-CCCccceEEecCC--------CeEEE
Confidence 344789999765554 4344 3344555555332211 11111 1223356667765 45544
Q ss_pred EcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEe-CCCCCEEEEEeC----------------------CC
Q 046451 90 GLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFN-SFTPNLLASGAD----------------------DG 146 (719)
Q Consensus 90 gs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fs-p~~~~~lasgs~----------------------dg 146 (719)
...+..|+..|+.+ . +....+....+.+-...|. ..++..++..-. ..
T Consensus 98 v~~~~~l~~vdL~T------~---e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~ 168 (386)
T PF14583_consen 98 VKNGRSLRRVDLDT------L---EERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHC 168 (386)
T ss_dssp EETTTEEEEEETTT-----------EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---E
T ss_pred EECCCeEEEEECCc------C---cEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCc
Confidence 44456788888843 2 3333333344445445554 224444433211 12
Q ss_pred cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC---CC-cEEEEECCC-CceeEEec-CCCCCce
Q 046451 147 EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY---NG-TTVVWDLKK-QKPVISFS-ESIKRRC 220 (719)
Q Consensus 147 ~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~---dg-~I~iwd~~~-~~~~~~~~-~~~~~~i 220 (719)
.|...|+.+++.... +. ....+..+.|+|....+|.-|-+ +. .-+||-+++ +.....+. ......+
T Consensus 169 ~i~~idl~tG~~~~v---~~-----~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~ 240 (386)
T PF14583_consen 169 RIFTIDLKTGERKVV---FE-----DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESV 240 (386)
T ss_dssp EEEEEETTT--EEEE---EE-----ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEE
T ss_pred eEEEEECCCCceeEE---Ee-----cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCccc
Confidence 355556666553322 11 23477889999987766666554 22 125555443 22222222 1234556
Q ss_pred eEEEECCCCCcEEEEEeCCCC-CCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCC------------
Q 046451 221 SVLQWNPDVATQLVVASDEDS-SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDN------------ 287 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~-~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg------------ 287 (719)
..--|.+||..++..+...+. ...|.-+|+.+... +.+ ........+-.++ |+++++-=+.|.
T Consensus 241 gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~--~~~-~~~p~~~H~~ss~-Dg~L~vGDG~d~p~~v~~~~~~~~ 316 (386)
T PF14583_consen 241 GHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGER--RRL-MEMPWCSHFMSSP-DGKLFVGDGGDAPVDVADAGGYKI 316 (386)
T ss_dssp EEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--E--EEE-EEE-SEEEEEE-T-TSSEEEEEE---------------
T ss_pred ccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCc--eEE-EeCCceeeeEEcC-CCCEEEecCCCCCcccccccccee
Confidence 666799999888776664332 33577778876532 112 1112344455566 777776544432
Q ss_pred ----cEEEEECCCCeEEEEe---------cCCCC-CeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 288 ----RTICWDTVSGEIVSEL---------PAGTN-WNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 288 ----~I~iwd~~~~~~~~~l---------~~h~~-~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
.|+++++..++..... .++.. .=-...|+|||+.+|.++...|...||-++
T Consensus 317 ~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v~ 381 (386)
T PF14583_consen 317 ENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLVE 381 (386)
T ss_dssp ----EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEEEE
T ss_pred cCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEEEe
Confidence 4667888776543211 11111 123579999998899999999988888654
No 328
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.19 E-value=0.00018 Score=83.03 Aligned_cols=238 Identities=15% Similarity=0.237 Sum_probs=145.0
Q ss_pred cCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEE
Q 046451 123 KGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWD 202 (719)
Q Consensus 123 ~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd 202 (719)
.+.|.++.|.- +.+-++.+..+|.|.+.|..+.... +-+ .....|.+++|+++. .+++..+..+++.+-+
T Consensus 68 d~~i~s~~fl~-d~~~i~v~~~~G~iilvd~et~~~e-----ivg---~vd~GI~aaswS~De-e~l~liT~~~tll~mT 137 (1265)
T KOG1920|consen 68 DDEIVSVQFLA-DTNSICVITALGDIILVDPETLELE-----IVG---NVDNGISAASWSPDE-ELLALITGRQTLLFMT 137 (1265)
T ss_pred CcceEEEEEec-ccceEEEEecCCcEEEEccccccee-----eee---eccCceEEEeecCCC-cEEEEEeCCcEEEEEe
Confidence 36899999988 7788888999999999988775432 111 234589999999997 4777777777776643
Q ss_pred C----CCC-------------------ceeEEecCC--------------------CCCceeEEEECCCCCcEEEEEe-C
Q 046451 203 L----KKQ-------------------KPVISFSES--------------------IKRRCSVLQWNPDVATQLVVAS-D 238 (719)
Q Consensus 203 ~----~~~-------------------~~~~~~~~~--------------------~~~~i~~l~~sp~g~~~l~~~s-~ 238 (719)
- -.. +....|... ..+.-..|.|-.||+ ++++.. .
T Consensus 138 ~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~-~fAVs~~~ 216 (1265)
T KOG1920|consen 138 KDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGE-YFAVSFVE 216 (1265)
T ss_pred ccccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCc-EEEEEEEe
Confidence 2 000 111112100 011123589999996 455422 2
Q ss_pred CCCC-CcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe---CCCcEEEEECCC---CeEEEEecCCCCCeE
Q 046451 239 EDSS-PALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA---KDNRTICWDTVS---GEIVSELPAGTNWNF 311 (719)
Q Consensus 239 d~~~-~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs---~Dg~I~iwd~~~---~~~~~~l~~h~~~v~ 311 (719)
...+ ..|++||-+ + ..-.+-....+.-.+++|-| .|.++++-. .|+.|.+|.-+. |+....+......|.
T Consensus 217 ~~~~~RkirV~drE-g-~Lns~se~~~~l~~~LsWkP-sgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve 293 (1265)
T KOG1920|consen 217 SETGTRKIRVYDRE-G-ALNSTSEPVEGLQHSLSWKP-SGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVE 293 (1265)
T ss_pred ccCCceeEEEeccc-c-hhhcccCcccccccceeecC-CCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchh
Confidence 2111 389999975 2 11111111222335799999 888888754 466799997632 333333333444589
Q ss_pred EeEEcCCCCCEEEE---EeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCC--CceeeeeCCcEEE
Q 046451 312 DIHWYPKIPGVISA---SSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRP--AGASFGFGGKLVS 377 (719)
Q Consensus 312 ~l~~spdg~~~las---~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~--~~~s~s~~Gklv~ 377 (719)
.++|+.++ .+||+ ......|++|-+.+-..+...+..|..... .+|.... ....+.-+|++++
T Consensus 294 ~L~Wns~s-diLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~~--~~W~p~~~~~L~v~~~sG~~~v 361 (1265)
T KOG1920|consen 294 ELAWNSNS-DILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKAL--LMWDPVTEKTLHVLRESGQRLV 361 (1265)
T ss_pred eeeecCCC-CceeeeecccccceEEEEEecCeEEEEEEEEecccccc--ccccCCCceeEEEEecCCcEEE
Confidence 99999998 78877 555556999999998876655544443322 3465432 2234444555443
No 329
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=98.17 E-value=8.1e-05 Score=80.05 Aligned_cols=290 Identities=14% Similarity=0.179 Sum_probs=142.0
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEE
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVA 88 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~la 88 (719)
.|++++|+++..-||+|...|.| .||.+........ .....-..+.+.+-.
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeV----------v~~k~~~n~~~~~-------~~~~~~~~~~~~~~~------------ 53 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEV----------VLFKFGKNQNYGN-------REQPPDLDYNFRRFS------------ 53 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-E----------EEEEEEE-------------------------S--------------
T ss_pred eEEEEEecCCCceEEEEccCCcE----------EEEEcccCCCCCc-------cCCCcccCccccccc------------
Confidence 47899999999999999998888 4555553322110 000001111111110
Q ss_pred EEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccC-
Q 046451 89 GGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRG- 167 (719)
Q Consensus 89 sgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~- 167 (719)
..++.-.|-|+.......-..+......+....+.|++++.+ |-.+++.|..+|.+.|.|++....+..- .+..
T Consensus 54 --~~~~~~~l~di~~r~~~~~~~gf~P~~l~~~~~g~vtal~~S--~iGFvaigy~~G~l~viD~RGPavI~~~-~i~~~ 128 (395)
T PF08596_consen 54 --LNNSPGKLTDISDRAPPSLKEGFLPLTLLDAKQGPVTALKNS--DIGFVAIGYESGSLVVIDLRGPAVIYNE-NIRES 128 (395)
T ss_dssp --GGGSS-SEEE-GGG--TT-SEEEEEEEEE---S-SEEEEEE---BTSEEEEEETTSEEEEEETTTTEEEEEE-EGGG-
T ss_pred --ccCCCcceEEehhhCCcccccccCchhheeccCCcEeEEecC--CCcEEEEEecCCcEEEEECCCCeEEeec-ccccc
Confidence 011122333433221111011123444555668999999997 4579999999999999999876544321 1222
Q ss_pred -CCCCCCCCeEEEEec-----CCC--CcEEEEEeCCCcEEEEECCC---CceeEEec---CCCCCceeEEE-ECCC----
Q 046451 168 -NGSAAQGEISFVSWN-----SKV--QHILASTSYNGTTVVWDLKK---QKPVISFS---ESIKRRCSVLQ-WNPD---- 228 (719)
Q Consensus 168 -~~~~h~~~I~~l~~s-----p~g--~~~l~s~s~dg~I~iwd~~~---~~~~~~~~---~~~~~~i~~l~-~sp~---- 228 (719)
........|+++.|. .|+ .-.|++|+..|.+.+|.+.- +.....+. ..+.+.|..|. |+.+
T Consensus 129 ~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~ 208 (395)
T PF08596_consen 129 FLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGES 208 (395)
T ss_dssp -T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B
T ss_pred ccccccccCeeEEEEEEEecCCCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCc
Confidence 122345578888885 111 14688899999999998751 21111111 12445555444 3221
Q ss_pred ----------------CCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeC----CCCCCeEEEEeCCCc
Q 046451 229 ----------------VATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWC----PNDSSYLLTCAKDNR 288 (719)
Q Consensus 229 ----------------g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~s----p~d~~~l~sgs~Dg~ 288 (719)
-..++++++.. .++++..-+.+...+.+ ........+++- ...+..|++-..+|.
T Consensus 209 a~At~~~~~~l~~g~~i~g~vVvvSe~----~irv~~~~~~k~~~K~~-~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~ 283 (395)
T PF08596_consen 209 ALATISAMQGLSKGISIPGYVVVVSES----DIRVFKPPKSKGAHKSF-DDPFLCSSASVVPTISRNGGYCLVCLFNNGS 283 (395)
T ss_dssp -B-BHHHHHGGGGT----EEEEEE-SS----EEEEE-TT---EEEEE--SS-EEEEEEEEEEEE-EEEEEEEEEEETTSE
T ss_pred ccCchhHhhccccCCCcCcEEEEEccc----ceEEEeCCCCcccceee-ccccccceEEEEeecccCCceEEEEEECCCc
Confidence 11255556655 59999987653333333 222223334442 115667888899999
Q ss_pred EEEEECCCCeEEEEecCCC----CCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 289 TICWDTVSGEIVSELPAGT----NWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 289 I~iwd~~~~~~~~~l~~h~----~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
|++|.+-.-+.+..+.-.. ..+...+|+.+| .+++-.+ ...+.++.+-.
T Consensus 284 i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~~G-di~~~~g-psE~~l~sv~~ 336 (395)
T PF08596_consen 284 IRIYSLPSLKEIKSVSLPPPLDSRRLSSSSISRNG-DIFYWTG-PSEIQLFSVWG 336 (395)
T ss_dssp EEEEETTT--EEEEEE-SS---HHHHTT-EE-TTS--EEEE-S-SSEEEEEEEES
T ss_pred EEEEECCCchHhhcccCCCccccccccccEECCCC-CEEEEeC-cccEEEEEEEc
Confidence 9999999888887776532 245567888998 5665555 44455444433
No 330
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.16 E-value=4.6e-06 Score=57.73 Aligned_cols=38 Identities=29% Similarity=0.745 Sum_probs=35.5
Q ss_pred CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEE
Q 046451 255 SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293 (719)
Q Consensus 255 ~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd 293 (719)
+++.++.+|...|++|+|++ ++.+|++++.|+.|+|||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~-~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSP-DGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEET-TSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEec-ccccceeeCCCCEEEEEC
Confidence 35788999999999999999 899999999999999997
No 331
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.15 E-value=0.0025 Score=71.40 Aligned_cols=265 Identities=14% Similarity=0.105 Sum_probs=145.7
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCC-----E-EEEEEeCCCCCEEEEEe---------CCCcEE
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGP-----V-RGLEFNSFTPNLLASGA---------DDGEIC 149 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~-----V-~~l~fsp~~~~~lasgs---------~dg~I~ 149 (719)
+.++.++.+|.|+.+|. .++ +.+..+...... + ....+. +.+++.++ .+|.|.
T Consensus 111 ~~V~v~~~~g~v~AlD~------~TG---~~~W~~~~~~~~~~~~~i~ssP~v~---~~~v~vg~~~~~~~~~~~~g~v~ 178 (488)
T cd00216 111 RKVFFGTFDGRLVALDA------ETG---KQVWKFGNNDQVPPGYTMTGAPTIV---KKLVIIGSSGAEFFACGVRGALR 178 (488)
T ss_pred CeEEEecCCCeEEEEEC------CCC---CEeeeecCCCCcCcceEecCCCEEE---CCEEEEeccccccccCCCCcEEE
Confidence 47778888999999998 455 555554432211 1 112221 24454543 367899
Q ss_pred EEcCCCCCCCCccCCccCCCCC------------CC-CCe-EEEEecCCCCcEEEEEeCCC------------------c
Q 046451 150 IWDLSAPAEPSHFPPLRGNGSA------------AQ-GEI-SFVSWNSKVQHILASTSYNG------------------T 197 (719)
Q Consensus 150 iwdl~~~~~~~~~~~l~~~~~~------------h~-~~I-~~l~~sp~g~~~l~s~s~dg------------------~ 197 (719)
.+|..+++..-.+......... +. ..+ ....++..+ .+++.++.++ .
T Consensus 179 alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~-g~V~vg~~~g~~~~~~~~~~~~~~~~~~~ 257 (488)
T cd00216 179 AYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKT-NLVYVGTGNGSPWNWGGRRTPGDNLYTDS 257 (488)
T ss_pred EEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCC-CEEEEECCCCCCCccCCccCCCCCCceee
Confidence 9999988866543211100000 00 011 123344343 3666676554 7
Q ss_pred EEEEECCCCceeEEecCCCCC-----ceeEEEEC----CCCC--cEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCC
Q 046451 198 TVVWDLKKQKPVISFSESIKR-----RCSVLQWN----PDVA--TQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKG 266 (719)
Q Consensus 198 I~iwd~~~~~~~~~~~~~~~~-----~i~~l~~s----p~g~--~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~ 266 (719)
|.-+|+++++.+..+...... ......+. -++. ..+++++.++ .+..+|.+++. .+-.....
T Consensus 258 l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G---~l~ald~~tG~-~~W~~~~~--- 330 (488)
T cd00216 258 IVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNG---FFYVLDRTTGK-LISARPEV--- 330 (488)
T ss_pred EEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCc---eEEEEECCCCc-EeeEeEee---
Confidence 999999999999887632111 00000111 1222 2466666666 89999998874 33222111
Q ss_pred eeEEEeCCCCCCeEEEE------------------eCCCcEEEEECCCCeEEEEecCCC--------CCe--EEeEEcCC
Q 046451 267 VIAMSWCPNDSSYLLTC------------------AKDNRTICWDTVSGEIVSELPAGT--------NWN--FDIHWYPK 318 (719)
Q Consensus 267 V~~v~~sp~d~~~l~sg------------------s~Dg~I~iwd~~~~~~~~~l~~h~--------~~v--~~l~~spd 318 (719)
...+..++ ..++.+ ..+|.|..+|+.+|+.+.+..... ... ..+.. .
T Consensus 331 ~~~~~~~~---~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~ 405 (488)
T cd00216 331 EQPMAYDP---GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLAT--A 405 (488)
T ss_pred ccccccCC---ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEe--c
Confidence 11223333 223222 246789999999999887765431 011 11222 3
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCCCC
Q 046451 319 IPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSSAG 385 (719)
Q Consensus 319 g~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~~~ 385 (719)
+ .+|+.++.||.|+.+|.++++.+-..+. .......| +.+..+|++++....++..
T Consensus 406 g-~~v~~g~~dG~l~ald~~tG~~lW~~~~--~~~~~a~P--------~~~~~~g~~yv~~~~g~~~ 461 (488)
T cd00216 406 G-NLVFAGAADGYFRAFDATTGKELWKFRT--PSGIQATP--------MTYEVNGKQYVGVMVGGGG 461 (488)
T ss_pred C-CeEEEECCCCeEEEEECCCCceeeEEEC--CCCceEcC--------EEEEeCCEEEEEEEecCCc
Confidence 3 5788888999999999999988653321 11111111 3456688887777666543
No 332
>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]
Probab=98.14 E-value=1.3e-05 Score=87.57 Aligned_cols=9 Identities=22% Similarity=0.420 Sum_probs=4.7
Q ss_pred CCHHHHHHH
Q 046451 661 ISKNAADKL 669 (719)
Q Consensus 661 ls~~~~~~l 669 (719)
||.+.++.|
T Consensus 730 Lse~~iqnL 738 (1102)
T KOG1924|consen 730 LSESMIQNL 738 (1102)
T ss_pred HHHHHHHHH
Confidence 555555443
No 333
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.14 E-value=5.9e-05 Score=77.06 Aligned_cols=215 Identities=15% Similarity=0.119 Sum_probs=127.4
Q ss_pred eeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC
Q 046451 116 IAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195 (719)
Q Consensus 116 ~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d 195 (719)
...+..|...|.+++|++.+..+|..++.+.+|+|.|+++......+. .+ ..+++++|+-+..++|..|..+
T Consensus 186 sq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~-------a~-~~~wSC~wDlde~h~IYaGl~n 257 (463)
T KOG1645|consen 186 SQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYI-------AY-NQIWSCCWDLDERHVIYAGLQN 257 (463)
T ss_pred hhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeehee-------cc-CCceeeeeccCCcceeEEeccC
Confidence 345667888999999999766689999999999999999987766542 12 4899999999989999999999
Q ss_pred CcEEEEECCCCcee-EEecC-CCCCceeEEEE------CCCCCcEEEEEeCCCCCCcEEEEecCCCCCc-eEEee-CCCC
Q 046451 196 GTTVVWDLKKQKPV-ISFSE-SIKRRCSVLQW------NPDVATQLVVASDEDSSPALRLWDMRNTMSP-VKEFV-GHTK 265 (719)
Q Consensus 196 g~I~iwd~~~~~~~-~~~~~-~~~~~i~~l~~------sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~-~~~~~-~h~~ 265 (719)
|.|.|||++..+-. ..+.. .....|..|+. .+.| . ++++...+ +..|++...... ...++ +..+
T Consensus 258 G~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~g-g-lLv~~lt~----l~f~ei~~s~~~~p~vlele~pG 331 (463)
T KOG1645|consen 258 GMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSG-G-LLVFALTV----LQFYEIVFSAECLPCVLELEPPG 331 (463)
T ss_pred ceEEEEEccCCCchHhhhhhhhccCcceeecccCcccccccc-c-eEEeeehh----hhhhhhhccccCCCcccccCCCc
Confidence 99999999975422 22211 12223333322 2223 2 33444332 677876533221 11111 2345
Q ss_pred CeeEEEeCCCCCCeEEEEeCCC------cEEE-EECCCCeEEEEec-CCCC-------CeEEeEEcCCCCCEEEEEeCCC
Q 046451 266 GVIAMSWCPNDSSYLLTCAKDN------RTIC-WDTVSGEIVSELP-AGTN-------WNFDIHWYPKIPGVISASSFDG 330 (719)
Q Consensus 266 ~V~~v~~sp~d~~~l~sgs~Dg------~I~i-wd~~~~~~~~~l~-~h~~-------~v~~l~~spdg~~~las~s~Dg 330 (719)
.+.++++++.....|++.-.+- .|.. -|..+|..+...+ ++.+ .-..+.=.++...++.+++..+
T Consensus 332 ~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn 411 (463)
T KOG1645|consen 332 ICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTN 411 (463)
T ss_pred ceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecCCcc
Confidence 5667777763344455443321 1111 1333444333222 1100 0011112334434556666678
Q ss_pred cEEEEeCCCCcccc
Q 046451 331 KIGIYNIEGCSRYG 344 (719)
Q Consensus 331 ~I~iwd~~~~~~~~ 344 (719)
.+.+||..+.+.+.
T Consensus 412 ~lil~D~~s~evvQ 425 (463)
T KOG1645|consen 412 ELILQDPHSFEVVQ 425 (463)
T ss_pred eeEEeccchhheee
Confidence 99999999988876
No 334
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=98.14 E-value=9.2e-07 Score=94.76 Aligned_cols=207 Identities=19% Similarity=0.287 Sum_probs=136.4
Q ss_pred cCCEEEEEEeCCC-CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC----CCc
Q 046451 123 KGPVRGLEFNSFT-PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY----NGT 197 (719)
Q Consensus 123 ~~~V~~l~fsp~~-~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~----dg~ 197 (719)
...+.|++++-+. ..++++|..+|.|-+-.++...... ......+...+++++|++-+.+.|++|-. |..
T Consensus 56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs-----~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~ 130 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSS-----AEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSS 130 (783)
T ss_pred CCCceeehhhcCCchhhhhhccccCceEEeecCCccccc-----ceecccccccccccccccccHHHHHhhhhhhcccCC
Confidence 4466777776533 3588999999999998887654331 11123456689999999876667777643 567
Q ss_pred EEEEECCCC--c--eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeC
Q 046451 198 TVVWDLKKQ--K--PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWC 273 (719)
Q Consensus 198 I~iwd~~~~--~--~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~s 273 (719)
+.|||+.++ . ....|.........+++|..+. .++++|.... .+.++|+|........+ .+..+..+...
T Consensus 131 ~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~-klvlaGm~sr---~~~ifdlRqs~~~~~sv--nTk~vqG~tVd 204 (783)
T KOG1008|consen 131 LKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDT-KLVLAGMTSR---SVHIFDLRQSLDSVSSV--NTKYVQGITVD 204 (783)
T ss_pred ccceecccccCCCccccccccccccCccccccccCc-chhhcccccc---hhhhhhhhhhhhhhhhh--hhhhcccceec
Confidence 999999876 2 2222331244556689999664 5677777776 79999998432222222 23355566666
Q ss_pred CCCCCeEEEEeCCCcEEEEE-CCCCeE-EEEecCCCC----CeEEeEEcCCCCCEEEEEeCC-CcEEEEeCCCCc
Q 046451 274 PNDSSYLLTCAKDNRTICWD-TVSGEI-VSELPAGTN----WNFDIHWYPKIPGVISASSFD-GKIGIYNIEGCS 341 (719)
Q Consensus 274 p~d~~~l~sgs~Dg~I~iwd-~~~~~~-~~~l~~h~~----~v~~l~~spdg~~~las~s~D-g~I~iwd~~~~~ 341 (719)
|-..+++++.. ||.|-+|| .++-+. +..+....+ .+..++|+|....++++...| ++|++|++..--
T Consensus 205 p~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~v~ 278 (783)
T KOG1008|consen 205 PFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICVVG 278 (783)
T ss_pred CCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccccC
Confidence 65557777665 99999999 433332 222222222 489999999887788888776 689999986543
No 335
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.14 E-value=0.00018 Score=75.32 Aligned_cols=281 Identities=17% Similarity=0.205 Sum_probs=136.0
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCc--EEEEcCCccccCCCCCCCCceeeecccc-CCEEEEEEeCCCCCEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGS--IDIWNPLSLISSGETGGNPLIAHLSRHK-GPVRGLEFNSFTPNLL 139 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~--I~lwd~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~fsp~~~~~l 139 (719)
|..-++.=+|..+|. ++|+.+..||. +.+.|+. + ..+..|.... .......+++ +.+.|
T Consensus 34 h~~YF~~~~ft~dG~-------kllF~s~~dg~~nly~lDL~------t----~~i~QLTdg~g~~~~g~~~s~-~~~~~ 95 (386)
T PF14583_consen 34 HRLYFYQNCFTDDGR-------KLLFASDFDGNRNLYLLDLA------T----GEITQLTDGPGDNTFGGFLSP-DDRAL 95 (386)
T ss_dssp E---TTS--B-TTS--------EEEEEE-TTSS-EEEEEETT------T-----EEEE---SS-B-TTT-EE-T-TSSEE
T ss_pred cceeecCCCcCCCCC-------EEEEEeccCCCcceEEEEcc------c----CEEEECccCCCCCccceEEec-CCCeE
Confidence 334455567888874 67777777775 4455552 2 4445555433 2233566777 55766
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEec--CCCCcEEEEEeC----------------------C
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWN--SKVQHILASTSY----------------------N 195 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~s--p~g~~~l~s~s~----------------------d 195 (719)
+-...+..|+-.|+.+.+....+. .....+-...|. .++ .+++..-. .
T Consensus 96 ~Yv~~~~~l~~vdL~T~e~~~vy~-------~p~~~~g~gt~v~n~d~-t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~ 167 (386)
T PF14583_consen 96 YYVKNGRSLRRVDLDTLEERVVYE-------VPDDWKGYGTWVANSDC-TKLVGIEISREDWKPLTKWKGFREFYEARPH 167 (386)
T ss_dssp EEEETTTEEEEEETTT--EEEEEE---------TTEEEEEEEEE-TTS-SEEEEEEEEGGG-----SHHHHHHHHHC---
T ss_pred EEEECCCeEEEEECCcCcEEEEEE-------CCcccccccceeeCCCc-cEEEEEEEeehhccCccccHHHHHHHhhCCC
Confidence 656566788989999876533321 122233334553 333 33332211 1
Q ss_pred CcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc-EEEEecCCCCCceEEeeCCCC--CeeEEEe
Q 046451 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA-LRLWDMRNTMSPVKEFVGHTK--GVIAMSW 272 (719)
Q Consensus 196 g~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~-I~lwDl~~~~~~~~~~~~h~~--~V~~v~~ 272 (719)
..|...|+.+++....+. ....+..+.|+|....+|+.|.....+.. -+||-++......+.+..+.. .+..=-|
T Consensus 168 ~~i~~idl~tG~~~~v~~--~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw 245 (386)
T PF14583_consen 168 CRIFTIDLKTGERKVVFE--DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFW 245 (386)
T ss_dssp EEEEEEETTT--EEEEEE--ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE
T ss_pred ceEEEEECCCCceeEEEe--cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccc
Confidence 356677888887766665 67788899999988888888776543321 366766654444444443332 2333458
Q ss_pred CCCCCCeEEE-Ee----CCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCC----------------c
Q 046451 273 CPNDSSYLLT-CA----KDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDG----------------K 331 (719)
Q Consensus 273 sp~d~~~l~s-gs----~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg----------------~ 331 (719)
.+ ||..|.- +. .+..|.-+|..+++....... .+...+.-++|| .+++-=+.|. .
T Consensus 246 ~~-DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~--p~~~H~~ss~Dg-~L~vGDG~d~p~~v~~~~~~~~~~~p~ 321 (386)
T PF14583_consen 246 VP-DGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEM--PWCSHFMSSPDG-KLFVGDGGDAPVDVADAGGYKIENDPW 321 (386)
T ss_dssp -T-TSS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE---SEEEEEE-TTS-SEEEEEE-------------------E
T ss_pred cC-CCCEEEEEeecCCCCceEEEeeCCCCCCceEEEeC--CceeeeEEcCCC-CEEEecCCCCCccccccccceecCCcE
Confidence 88 6665443 22 244567778888765432222 245566677888 5665533332 5
Q ss_pred EEEEeCCCCcccccCCCCCCCCCccCccee-------cCCCceeeeeCCcEEEEccCCC
Q 046451 332 IGIYNIEGCSRYGVGDSNFSAAPLRAPKWY-------KRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 332 I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~-------~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
|++++++.+.......+.. .|. ..-.-.+|++|||.|+|..+-.
T Consensus 322 i~~~~~~~~~~~~l~~h~~--------sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~ 372 (386)
T PF14583_consen 322 IYLFDVEAGRFRKLARHDT--------SWKVLDGDRQVTHPHPSFSPDGKWVLFRSDME 372 (386)
T ss_dssp EEEEETTTTEEEEEEE---------------BTTBSSTT----EE-TTSSEEEEEE-TT
T ss_pred EEEeccccCceeeeeeccC--------cceeecCCCccCCCCCccCCCCCEEEEECCCC
Confidence 6678888776654333321 121 1235579999999999998754
No 336
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.14 E-value=0.00073 Score=72.47 Aligned_cols=260 Identities=16% Similarity=0.134 Sum_probs=141.5
Q ss_pred CCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCC
Q 046451 93 DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAA 172 (719)
Q Consensus 93 dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h 172 (719)
.+.+.|||+.+ ..+..+......+....|+| +++.|+... ++.|+++++.++...+.- ..+ ...
T Consensus 22 ~~~y~i~d~~~----------~~~~~l~~~~~~~~~~~~sP-~g~~~~~v~-~~nly~~~~~~~~~~~lT--~dg--~~~ 85 (353)
T PF00930_consen 22 KGDYYIYDIET----------GEITPLTPPPPKLQDAKWSP-DGKYIAFVR-DNNLYLRDLATGQETQLT--TDG--EPG 85 (353)
T ss_dssp EEEEEEEETTT----------TEEEESS-EETTBSEEEE-S-SSTEEEEEE-TTEEEEESSTTSEEEESE--S----TTT
T ss_pred ceeEEEEecCC----------CceEECcCCccccccceeec-CCCeeEEEe-cCceEEEECCCCCeEEec--ccc--cee
Confidence 46789999843 33334433367888999999 788887775 578999998766332111 011 000
Q ss_pred --------------CCCeEEEEecCCCCcEEEEEeCCCc-----------------------------------EEEEEC
Q 046451 173 --------------QGEISFVSWNSKVQHILASTSYNGT-----------------------------------TVVWDL 203 (719)
Q Consensus 173 --------------~~~I~~l~~sp~g~~~l~s~s~dg~-----------------------------------I~iwd~ 203 (719)
-+.-..+.|+|+++++++.-..+.. +.|+|+
T Consensus 86 i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~ 165 (353)
T PF00930_consen 86 IYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDL 165 (353)
T ss_dssp EEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEES
T ss_pred EEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEEC
Confidence 1123568899998644333222222 344555
Q ss_pred CCCceeE-Eec---CCCCCceeEEEECCCCCcEEE-EEeCCCCCCcEEEEecCCCCCceEEeeCCCCCe---eEEEeC-C
Q 046451 204 KKQKPVI-SFS---ESIKRRCSVLQWNPDVATQLV-VASDEDSSPALRLWDMRNTMSPVKEFVGHTKGV---IAMSWC-P 274 (719)
Q Consensus 204 ~~~~~~~-~~~---~~~~~~i~~l~~sp~g~~~l~-~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V---~~v~~s-p 274 (719)
.+++... ... ......+..+.|.+++..+++ ....+.+...+.++|..++...+.........| ..+.|. +
T Consensus 166 ~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~ 245 (353)
T PF00930_consen 166 ASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGP 245 (353)
T ss_dssp SSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TT
T ss_pred CCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccC
Confidence 5554321 111 134556788999999863333 333443333567778766543332222233333 355554 6
Q ss_pred CCCCeEEEEeCCCcEE--EEECCCCeEEEEecCCCCCeEE-eEEcCCCCCEEEEEeCCC----cEEEEeCC-CCcccccC
Q 046451 275 NDSSYLLTCAKDNRTI--CWDTVSGEIVSELPAGTNWNFD-IHWYPKIPGVISASSFDG----KIGIYNIE-GCSRYGVG 346 (719)
Q Consensus 275 ~d~~~l~sgs~Dg~I~--iwd~~~~~~~~~l~~h~~~v~~-l~~spdg~~~las~s~Dg----~I~iwd~~-~~~~~~~~ 346 (719)
++..+|.....||.-+ +++...+.. ..+....-.|.. +.|+.++..+++++..++ .|..-++. +++.....
T Consensus 246 ~~~~~l~~s~~~G~~hly~~~~~~~~~-~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT 324 (353)
T PF00930_consen 246 DGNEFLWISERDGYRHLYLYDLDGGKP-RQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLT 324 (353)
T ss_dssp TSSEEEEEEETTSSEEEEEEETTSSEE-EESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESS
T ss_pred CCCEEEEEEEcCCCcEEEEEcccccce-eccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEecc
Confidence 4666777777887654 556655553 455555555644 788888866777777643 55555666 55554422
Q ss_pred CCCCCCCCccCcceecCCCceeeeeCCcEEEEccC
Q 046451 347 DSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPK 381 (719)
Q Consensus 347 ~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~ 381 (719)
...... ..++||+||+.++....
T Consensus 325 ~~~~~~------------~~~~~Spdg~y~v~~~s 347 (353)
T PF00930_consen 325 CEDGDH------------YSASFSPDGKYYVDTYS 347 (353)
T ss_dssp TTSSTT------------EEEEE-TTSSEEEEEEE
T ss_pred CCCCCc------------eEEEECCCCCEEEEEEc
Confidence 211110 25799999998765543
No 337
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=98.13 E-value=0.00022 Score=71.39 Aligned_cols=197 Identities=12% Similarity=0.123 Sum_probs=113.6
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeC-CCCCCcEEEEecCC
Q 046451 174 GEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASD-EDSSPALRLWDMRN 252 (719)
Q Consensus 174 ~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~-d~~~~~I~lwDl~~ 252 (719)
..+..|+|+++...++++....+.|..++.+ ++.+.++..........|++..++ .++.... ++ .+.++++..
T Consensus 22 ~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~--~~vl~~Er~~---~L~~~~~~~ 95 (248)
T PF06977_consen 22 DELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNG--RYVLSEERDQ---RLYIFTIDD 95 (248)
T ss_dssp S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-STT--EEEEEETTTT---EEEEEEE--
T ss_pred CCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCC--EEEEEEcCCC---cEEEEEEec
Confidence 3699999999877788889999999999974 788888775556778899998776 4454443 43 798888844
Q ss_pred CCCce-----EEee-----CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC---CeEEEEe--------cCCCCCeE
Q 046451 253 TMSPV-----KEFV-----GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS---GEIVSEL--------PAGTNWNF 311 (719)
Q Consensus 253 ~~~~~-----~~~~-----~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~---~~~~~~l--------~~h~~~v~ 311 (719)
....+ ..+. .+..++-.++|++ .++.|+.+-+..-..||.+.. ...+... ......+.
T Consensus 96 ~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~-~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S 174 (248)
T PF06977_consen 96 DTTSLDRADVQKISLGFPNKGNKGFEGLAYDP-KTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLS 174 (248)
T ss_dssp --TT--EEEEEEEE---S---SS--EEEEEET-TTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---
T ss_pred cccccchhhceEEecccccCCCcceEEEEEcC-CCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecccc
Confidence 32211 1111 2456789999999 556666666666666776643 2221111 12334588
Q ss_pred EeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEcc
Q 046451 312 DIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHP 380 (719)
Q Consensus 312 ~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~ 380 (719)
++++++....+++.+..+..|.++|.+. +...... +....-...+....+.|++|..+|++++.+.
T Consensus 175 ~l~~~p~t~~lliLS~es~~l~~~d~~G-~~~~~~~--L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsE 240 (248)
T PF06977_consen 175 GLSYDPRTGHLLILSDESRLLLELDRQG-RVVSSLS--LDRGFHGLSKDIPQPEGIAFDPDGNLYIVSE 240 (248)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEE-TT---EEEEEE---STTGGG-SS---SEEEEEE-TT--EEEEET
T ss_pred ceEEcCCCCeEEEEECCCCeEEEECCCC-CEEEEEE--eCCcccCcccccCCccEEEECCCCCEEEEcC
Confidence 9999998778888888899999999444 4332110 1100001224566789999999999988764
No 338
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.09 E-value=0.00035 Score=77.30 Aligned_cols=243 Identities=9% Similarity=0.025 Sum_probs=135.8
Q ss_pred CCCEEEEEeC-CCcEEEEcCCCCCCCCccC--CccCCC------CCCCCCeEE-----EEecCCCCcEEEEEeCCCcEEE
Q 046451 135 TPNLLASGAD-DGEICIWDLSAPAEPSHFP--PLRGNG------SAAQGEISF-----VSWNSKVQHILASTSYNGTTVV 200 (719)
Q Consensus 135 ~~~~lasgs~-dg~I~iwdl~~~~~~~~~~--~l~~~~------~~h~~~I~~-----l~~sp~g~~~l~s~s~dg~I~i 200 (719)
|+++|+.-.. +..|-..+++..++.+.+. .....+ ..+.+.|.+ +=+.++|..+..+.-..+.+.+
T Consensus 140 dGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSv 219 (635)
T PRK02888 140 DGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTA 219 (635)
T ss_pred ceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEE
Confidence 4567776653 5566666666555433221 111100 001122222 2234565433334445678888
Q ss_pred EECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeE
Q 046451 201 WDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYL 280 (719)
Q Consensus 201 wd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l 280 (719)
+|.++.+...++. -......++++++|++.++++.+.....++...+.... ..+..+.- ..+. .+.. +|++.
T Consensus 220 ID~etmeV~~qV~--Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~-d~~vvfni--~~ie--a~vk-dGK~~ 291 (635)
T PRK02888 220 VDAETMEVAWQVM--VDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAER-DWVVVFNI--ARIE--EAVK-AGKFK 291 (635)
T ss_pred EECccceEEEEEE--eCCCcccceECCCCCEEEEeccCcccCcceeeeccccC-ceEEEEch--HHHH--Hhhh-CCCEE
Confidence 9999888877776 44466788999999766666533222225555554321 11111110 1111 3344 66666
Q ss_pred EEEeCCCcEEEEECCC-----CeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCc
Q 046451 281 LTCAKDNRTICWDTVS-----GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPL 355 (719)
Q Consensus 281 ~sgs~Dg~I~iwd~~~-----~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 355 (719)
.. .+++|.++|..+ .+.+..+.... ....+.++|||.++++++..+.+|.|+|+++.+..-.....+.....
T Consensus 292 ~V--~gn~V~VID~~t~~~~~~~v~~yIPVGK-sPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vv 368 (635)
T PRK02888 292 TI--GGSKVPVVDGRKAANAGSALTRYVPVPK-NPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVV 368 (635)
T ss_pred EE--CCCEEEEEECCccccCCcceEEEEECCC-CccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEE
Confidence 65 367899999998 45666665544 48899999999878888888999999999986642211111111111
Q ss_pred cCcceecCCCceeeeeCCc-EEEEccCCCCCccc
Q 046451 356 RAPKWYKRPAGASFGFGGK-LVSFHPKSSAGHTS 388 (719)
Q Consensus 356 ~~p~w~~~~~~~s~s~~Gk-lv~~~~~~~~~~~~ 388 (719)
..+.--..+...+|..+|+ +..+..++...+|+
T Consensus 369 aevevGlGPLHTaFDg~G~aytslf~dsqv~kwn 402 (635)
T PRK02888 369 AEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWN 402 (635)
T ss_pred EeeccCCCcceEEECCCCCEEEeEeecceeEEEe
Confidence 1122222345567777665 34455566656655
No 339
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.07 E-value=0.00021 Score=77.65 Aligned_cols=190 Identities=16% Similarity=0.247 Sum_probs=116.0
Q ss_pred CeEEEEecCCCCcEEEEEeCC---CcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecC
Q 046451 175 EISFVSWNSKVQHILASTSYN---GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR 251 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~d---g~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~ 251 (719)
.+..-+|++++..+....-.. ..++++|+.+++...... ..+.-...+|+|||++++++...++ ...|+++|+.
T Consensus 194 ~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~--~~g~~~~P~fspDG~~l~f~~~rdg-~~~iy~~dl~ 270 (425)
T COG0823 194 LILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN--FNGNNGAPAFSPDGSKLAFSSSRDG-SPDIYLMDLD 270 (425)
T ss_pred ceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec--cCCccCCccCCCCCCEEEEEECCCC-CccEEEEcCC
Confidence 566778999986554443333 349999999987666555 4555566799999977666666664 4578888987
Q ss_pred CCCCceEEeeCCCCCeeEEEeCCCCCCeEEEE-eCCCc--EEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeC
Q 046451 252 NTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC-AKDNR--TICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSF 328 (719)
Q Consensus 252 ~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sg-s~Dg~--I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~ 328 (719)
... +..+....+.-..=.|+| ||++|+-. +..|. |.++|.+.+.. ..+......-..-.|+|||..+++....
T Consensus 271 ~~~--~~~Lt~~~gi~~~Ps~sp-dG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~~p~~SpdG~~i~~~~~~ 346 (425)
T COG0823 271 GKN--LPRLTNGFGINTSPSWSP-DGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNSNPVWSPDGDKIVFESSS 346 (425)
T ss_pred CCc--ceecccCCccccCccCCC-CCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCCCcCccCCCCCCEEEEEecc
Confidence 654 333443333334678999 67666554 45554 55557655543 3333222222377899999555555543
Q ss_pred CCc--EEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCC
Q 046451 329 DGK--IGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 329 Dg~--I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
+|. |.+.|+.++.-.......+. ...-+|+.+|+.+.|.....
T Consensus 347 ~g~~~i~~~~~~~~~~~~~lt~~~~------------~e~ps~~~ng~~i~~~s~~~ 391 (425)
T COG0823 347 GGQWDIDKNDLASGGKIRILTSTYL------------NESPSWAPNGRMIMFSSGQG 391 (425)
T ss_pred CCceeeEEeccCCCCcEEEcccccc------------CCCCCcCCCCceEEEeccCC
Confidence 455 66666666553222222211 12346778888887776555
No 340
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=98.03 E-value=0.0059 Score=66.64 Aligned_cols=213 Identities=12% Similarity=0.164 Sum_probs=113.0
Q ss_pred cEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCC
Q 046451 95 SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQG 174 (719)
Q Consensus 95 ~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~ 174 (719)
.|+||+. .| ..+..+.-..+.|.++.|+. ...|++...||.+++||+.... ...+............
T Consensus 62 ~I~iys~-------sG---~ll~~i~w~~~~iv~~~wt~--~e~LvvV~~dG~v~vy~~~G~~-~fsl~~~i~~~~v~e~ 128 (410)
T PF04841_consen 62 SIQIYSS-------SG---KLLSSIPWDSGRIVGMGWTD--DEELVVVQSDGTVRVYDLFGEF-QFSLGEEIEEEKVLEC 128 (410)
T ss_pred EEEEECC-------CC---CEeEEEEECCCCEEEEEECC--CCeEEEEEcCCEEEEEeCCCce-eechhhhccccCcccc
Confidence 4888885 45 66666555558999999976 4567778899999999987443 1110000000011112
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc-eeEEecC--CC------CCceeE-EEECCCCCcEEEEEeCCCCCCc
Q 046451 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQK-PVISFSE--SI------KRRCSV-LQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~-~~~~~~~--~~------~~~i~~-l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
.+....+...| ++.-..++.+++.+-.... ....+.. .. ...... ..++.+.. ..+....++ .
T Consensus 129 ~i~~~~~~~~G---ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~-~~i~~~~g~---~ 201 (410)
T PF04841_consen 129 RIFAIWFYKNG---IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRV-VEILLANGE---T 201 (410)
T ss_pred cccccccCCCC---EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcc-eEEEEecCC---E
Confidence 23333333344 2333345555544322211 1111110 00 000000 22344432 223333333 4
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCC-CCCeEEeEEcCCCCCEE
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAG-TNWNFDIHWYPKIPGVI 323 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h-~~~v~~l~~spdg~~~l 323 (719)
+.+.+-... ..+. ..+.+..|++|| ++++|+.-..+|.+.|.+..-.+.+.++... ......+.|.-++ .++
T Consensus 202 i~~i~~~~~----~~i~-~~~~i~~iavSp-ng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~d-av~ 274 (410)
T PF04841_consen 202 IYIIDENSF----KQID-SDGPIIKIAVSP-NGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGND-AVV 274 (410)
T ss_pred EEEEEcccc----cccc-CCCCeEEEEECC-CCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCC-cEE
Confidence 554443221 1121 235899999999 9999999999999999987766777777654 3456778887765 233
Q ss_pred EEEeCCCcEEEEe
Q 046451 324 SASSFDGKIGIYN 336 (719)
Q Consensus 324 as~s~Dg~I~iwd 336 (719)
+.- +..|.++.
T Consensus 275 l~~--~~~l~lvg 285 (410)
T PF04841_consen 275 LSW--EDELLLVG 285 (410)
T ss_pred EEe--CCEEEEEC
Confidence 322 34555554
No 341
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=98.02 E-value=0.0011 Score=66.49 Aligned_cols=203 Identities=17% Similarity=0.199 Sum_probs=115.1
Q ss_pred eeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCc
Q 046451 118 HLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGT 197 (719)
Q Consensus 118 ~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~ 197 (719)
.+.+-...+.+|+|+++++.++++....+.|..+++. ++.++.+. +.+ .+....|++..++ .++++.-.++.
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~-l~g-----~~D~EgI~y~g~~-~~vl~~Er~~~ 87 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIP-LDG-----FGDYEGITYLGNG-RYVLSEERDQR 87 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE--SS------SSEEEEEE-STT-EEEEEETTTTE
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEe-CCC-----CCCceeEEEECCC-EEEEEEcCCCc
Confidence 4445566799999999666678888888999888874 45444432 221 3478889998775 45555545899
Q ss_pred EEEEECCCCc------eeEEec--C--CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC--CCCceEEe-----
Q 046451 198 TVVWDLKKQK------PVISFS--E--SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN--TMSPVKEF----- 260 (719)
Q Consensus 198 I~iwd~~~~~------~~~~~~--~--~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~--~~~~~~~~----- 260 (719)
+.++++.... ....+. . .++..+..++|++.+..++++ -... -..||.++. ....+...
T Consensus 88 L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~-kE~~---P~~l~~~~~~~~~~~~~~~~~~~~ 163 (248)
T PF06977_consen 88 LYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVA-KERK---PKRLYEVNGFPGGFDLFVSDDQDL 163 (248)
T ss_dssp EEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEE-EESS---SEEEEEEESTT-SS--EEEE-HHH
T ss_pred EEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEE-eCCC---ChhhEEEccccCccceeecccccc
Confidence 9999984321 111121 1 255678999999998666655 4443 466766653 11111111
Q ss_pred ---eCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC---------CCeEEeEEcCCCCCEEEEEeC
Q 046451 261 ---VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT---------NWNFDIHWYPKIPGVISASSF 328 (719)
Q Consensus 261 ---~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~---------~~v~~l~~spdg~~~las~s~ 328 (719)
......+.++++++..+.+++.+..+..|.++| .+|+.+..+.-.. .....|+|.++| .+.++ ++
T Consensus 164 ~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G-~LYIv-sE 240 (248)
T PF06977_consen 164 DDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDG-NLYIV-SE 240 (248)
T ss_dssp H-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT---EEEE-ET
T ss_pred ccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCC-CEEEE-cC
Confidence 123456789999997778888888999999999 5787766554222 246889999998 44444 45
Q ss_pred CCcEEEE
Q 046451 329 DGKIGIY 335 (719)
Q Consensus 329 Dg~I~iw 335 (719)
-+..++|
T Consensus 241 pNlfy~f 247 (248)
T PF06977_consen 241 PNLFYRF 247 (248)
T ss_dssp TTEEEEE
T ss_pred CceEEEe
Confidence 6666655
No 342
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.01 E-value=0.0002 Score=77.33 Aligned_cols=140 Identities=14% Similarity=0.123 Sum_probs=92.4
Q ss_pred eEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEE----cCCCcE----EEEcCCccccCCCCC
Q 046451 40 NLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGG----LVDGSI----DIWNPLSLISSGETG 111 (719)
Q Consensus 40 ~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasg----s~dg~I----~lwd~~~~~~~~~~~ 111 (719)
++.++.+... .+.+......+....++.||...+ ..|.+. +.+|.+ .+|++.. ..
T Consensus 185 Nl~L~~~~~~----klEvL~yirTE~dPl~~~Fs~~~~-------~qi~tVE~s~s~~g~~~~d~ciYE~~r------~k 247 (545)
T PF11768_consen 185 NLHLLSCSGG----KLEVLSYIRTENDPLDVEFSLNQP-------YQIHTVEQSISVKGEPSADSCIYECSR------NK 247 (545)
T ss_pred cEEEEEecCC----cEEEEEEEEecCCcEEEEccCCCC-------cEEEEEEEecCCCCCceeEEEEEEeec------Cc
Confidence 4555555533 344455556667778888987542 344432 334543 4555521 10
Q ss_pred CCCce-eeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEE
Q 046451 112 GNPLI-AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILA 190 (719)
Q Consensus 112 ~~~~~-~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~ 190 (719)
.+.+ .+.......|.|+++++ +.+.|+.|+.||.|.+||...+..... ...-..+.++|+|+| .+++
T Consensus 248 -lqrvsvtsipL~s~v~~ca~sp-~E~kLvlGC~DgSiiLyD~~~~~t~~~---------ka~~~P~~iaWHp~g-ai~~ 315 (545)
T PF11768_consen 248 -LQRVSVTSIPLPSQVICCARSP-SEDKLVLGCEDGSIILYDTTRGVTLLA---------KAEFIPTLIAWHPDG-AIFV 315 (545)
T ss_pred -eeEEEEEEEecCCcceEEecCc-ccceEEEEecCCeEEEEEcCCCeeeee---------eecccceEEEEcCCC-cEEE
Confidence 0111 12224677899999999 789999999999999999876643211 122357899999998 5999
Q ss_pred EEeCCCcEEEEECCCCce
Q 046451 191 STSYNGTTVVWDLKKQKP 208 (719)
Q Consensus 191 s~s~dg~I~iwd~~~~~~ 208 (719)
+|+..|.+.+||+.-...
T Consensus 316 V~s~qGelQ~FD~ALspi 333 (545)
T PF11768_consen 316 VGSEQGELQCFDMALSPI 333 (545)
T ss_pred EEcCCceEEEEEeecCcc
Confidence 999999999999875443
No 343
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=98.01 E-value=0.0032 Score=65.32 Aligned_cols=230 Identities=11% Similarity=0.076 Sum_probs=132.0
Q ss_pred eeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcE
Q 046451 69 RLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEI 148 (719)
Q Consensus 69 ~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I 148 (719)
+..|.++.. .++.+--..+.|.-|+..+ .....+. +.+.+.++.... .+..|+++.. .+
T Consensus 29 gP~w~~~~~-------~L~w~DI~~~~i~r~~~~~----------g~~~~~~-~p~~~~~~~~~d-~~g~Lv~~~~--g~ 87 (307)
T COG3386 29 GPVWDPDRG-------ALLWVDILGGRIHRLDPET----------GKKRVFP-SPGGFSSGALID-AGGRLIACEH--GV 87 (307)
T ss_pred CccCcCCCC-------EEEEEeCCCCeEEEecCCc----------CceEEEE-CCCCcccceeec-CCCeEEEEcc--cc
Confidence 345666652 4666666788899998732 2222333 233334444433 3455555543 35
Q ss_pred EEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC-----------CCcEEEEECCCCceeEEecCCCC
Q 046451 149 CIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY-----------NGTTVVWDLKKQKPVISFSESIK 217 (719)
Q Consensus 149 ~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~-----------dg~I~iwd~~~~~~~~~~~~~~~ 217 (719)
++++.+++..+..+..... .......+.+...++|. +.++... -|.|+.+|. .+..+..+. .+-
T Consensus 88 ~~~~~~~~~~~t~~~~~~~--~~~~~r~ND~~v~pdG~-~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~-~~~ 162 (307)
T COG3386 88 RLLDPDTGGKITLLAEPED--GLPLNRPNDGVVDPDGR-IWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLD-DDL 162 (307)
T ss_pred EEEeccCCceeEEeccccC--CCCcCCCCceeEcCCCC-EEEeCCCccccCccccCCcceEEEEcC-CCCEEEeec-CcE
Confidence 6667655544222211111 11224667888889974 3333222 133444443 344444444 445
Q ss_pred CceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC-C----CCc-eEEeeCCCCCeeEEEeCCCCCCeEEEEeCCC-cEE
Q 046451 218 RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN-T----MSP-VKEFVGHTKGVIAMSWCPNDSSYLLTCAKDN-RTI 290 (719)
Q Consensus 218 ~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~-~----~~~-~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg-~I~ 290 (719)
..-+.|+||||++.++++-+..+ .|+-|++.. . ... ...+..+.+..-.++... ++.+.+++..+| .|.
T Consensus 163 ~~~NGla~SpDg~tly~aDT~~~---~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDa-dG~lw~~a~~~g~~v~ 238 (307)
T COG3386 163 TIPNGLAFSPDGKTLYVADTPAN---RIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDA-DGNLWVAAVWGGGRVV 238 (307)
T ss_pred EecCceEECCCCCEEEEEeCCCC---eEEEEecCcccCccCCcceEEEccCCCCCCCceEEeC-CCCEEEecccCCceEE
Confidence 66788999999986666666655 788887752 1 111 111222334445566666 777665555554 999
Q ss_pred EEECCCCeEEEEecCCCCCeEEeEEcCC-CCCEEEEEeCC
Q 046451 291 CWDTVSGEIVSELPAGTNWNFDIHWYPK-IPGVISASSFD 329 (719)
Q Consensus 291 iwd~~~~~~~~~l~~h~~~v~~l~~spd-g~~~las~s~D 329 (719)
+|+.. |+++.++......+++++|--. ...+++|+...
T Consensus 239 ~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs~~~ 277 (307)
T COG3386 239 RFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYITSARS 277 (307)
T ss_pred EECCC-CcEEEEEECCCCCCccceEeCCCcCEEEEEecCC
Confidence 99997 9999999888777999999753 33455555543
No 344
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.01 E-value=0.0031 Score=68.39 Aligned_cols=77 Identities=18% Similarity=0.248 Sum_probs=64.0
Q ss_pred CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 262 GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 262 ~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
.....|.++++++ +.+.|+.|+.||.|.+||...+..... ...-..+.++|+|+| .++++|+..|.|.+||+.-.-
T Consensus 257 pL~s~v~~ca~sp-~E~kLvlGC~DgSiiLyD~~~~~t~~~--ka~~~P~~iaWHp~g-ai~~V~s~qGelQ~FD~ALsp 332 (545)
T PF11768_consen 257 PLPSQVICCARSP-SEDKLVLGCEDGSIILYDTTRGVTLLA--KAEFIPTLIAWHPDG-AIFVVGSEQGELQCFDMALSP 332 (545)
T ss_pred ecCCcceEEecCc-ccceEEEEecCCeEEEEEcCCCeeeee--eecccceEEEEcCCC-cEEEEEcCCceEEEEEeecCc
Confidence 3667899999999 899999999999999999977643322 333457899999999 799999999999999997654
Q ss_pred c
Q 046451 342 R 342 (719)
Q Consensus 342 ~ 342 (719)
+
T Consensus 333 i 333 (545)
T PF11768_consen 333 I 333 (545)
T ss_pred c
Confidence 4
No 345
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.00 E-value=0.0008 Score=74.59 Aligned_cols=104 Identities=13% Similarity=0.050 Sum_probs=74.3
Q ss_pred CCCCcEEEEEeCCCcEEEEECCC-----CceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC--
Q 046451 183 SKVQHILASTSYNGTTVVWDLKK-----QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS-- 255 (719)
Q Consensus 183 p~g~~~l~s~s~dg~I~iwd~~~-----~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~-- 255 (719)
.+|. +... .++.|.++|.++ .+.+..+. -......++++|||+++++++..+. +|.|+|+.+...
T Consensus 286 kdGK-~~~V--~gn~V~VID~~t~~~~~~~v~~yIP--VGKsPHGV~vSPDGkylyVanklS~---tVSVIDv~k~k~~~ 357 (635)
T PRK02888 286 KAGK-FKTI--GGSKVPVVDGRKAANAGSALTRYVP--VPKNPHGVNTSPDGKYFIANGKLSP---TVTVIDVRKLDDLF 357 (635)
T ss_pred hCCC-EEEE--CCCEEEEEECCccccCCcceEEEEE--CCCCccceEECCCCCEEEEeCCCCC---cEEEEEChhhhhhh
Confidence 4554 3333 367899999998 34555555 6778899999999987777777776 999999986432
Q ss_pred ---------ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC
Q 046451 256 ---------PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 256 ---------~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~ 296 (719)
.+.+..- ...-...+|.. +|+.+.+..-|..|..||+..
T Consensus 358 ~~~~~~~~~vvaevev-GlGPLHTaFDg-~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 358 DGKIKPRDAVVAEPEL-GLGPLHTAFDG-RGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred hccCCccceEEEeecc-CCCcceEEECC-CCCEEEeEeecceeEEEehHH
Confidence 1122221 22334678888 788888888999999999876
No 346
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=98.00 E-value=0.00027 Score=76.05 Aligned_cols=277 Identities=13% Similarity=0.120 Sum_probs=134.8
Q ss_pred CceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec-cccCCEEEEEEeCCCCCEEEEEeC
Q 046451 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS-RHKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 66 ~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
.|+.+.|..+. .-|++|..+|.|.||....... .. .....-....|.+. ...
T Consensus 3 ~v~~vs~a~~t--------~Elav~~~~GeVv~~k~~~n~~------------~~~~~~~~~~~~~~~~~-------~~~ 55 (395)
T PF08596_consen 3 SVTHVSFAPET--------LELAVGLESGEVVLFKFGKNQN------------YGNREQPPDLDYNFRRF-------SLN 55 (395)
T ss_dssp -EEEEEEETTT--------TEEEEEETTS-EEEEEEEE------------------------------S---------GG
T ss_pred eEEEEEecCCC--------ceEEEEccCCcEEEEEcccCCC------------CCccCCCcccCcccccc-------ccc
Confidence 47788998886 6899999999999998743111 10 00011111111110 001
Q ss_pred CCcEEEEcCCC---CCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-------
Q 046451 145 DGEICIWDLSA---PAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE------- 214 (719)
Q Consensus 145 dg~I~iwdl~~---~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~------- 214 (719)
++.-.+-|+.. .....-|.++... ....+.|++++.+.-| +++.|..+|.+.|.|+|....+..-..
T Consensus 56 ~~~~~l~di~~r~~~~~~~gf~P~~l~-~~~~g~vtal~~S~iG--Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~ 132 (395)
T PF08596_consen 56 NSPGKLTDISDRAPPSLKEGFLPLTLL-DAKQGPVTALKNSDIG--FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSK 132 (395)
T ss_dssp GSS-SEEE-GGG--TT-SEEEEEEEEE----S-SEEEEEE-BTS--EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-S
T ss_pred CCCcceEEehhhCCcccccccCchhhe-eccCCcEeEEecCCCc--EEEEEecCCcEEEEECCCCeEEeecccccccccc
Confidence 11112223322 2211112111111 1236689999998775 999999999999999998877765321
Q ss_pred CCCCceeEEEEC-----CCC--CcEEEEEeCCCCCCcEEEEecC-CC-CCc----eEEeeCCCCCeeEEE-eCCCCC---
Q 046451 215 SIKRRCSVLQWN-----PDV--ATQLVVASDEDSSPALRLWDMR-NT-MSP----VKEFVGHTKGVIAMS-WCPNDS--- 277 (719)
Q Consensus 215 ~~~~~i~~l~~s-----p~g--~~~l~~~s~d~~~~~I~lwDl~-~~-~~~----~~~~~~h~~~V~~v~-~sp~d~--- 277 (719)
.....++++.|. .|+ .-.+++|.+.| .+.+|.+. .. ..- ......+.+.|..|. |+.+++
T Consensus 133 ~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~G---~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a 209 (395)
T PF08596_consen 133 SSSSYVTSIEFSVMTLGGDGYSSICLLVGTNSG---NVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESA 209 (395)
T ss_dssp S----EEEEEEEEEE-TTSSSEEEEEEEEETTS---EEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-
T ss_pred ccccCeeEEEEEEEecCCCcccceEEEEEeCCC---CEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcc
Confidence 233456777775 222 23566777776 88888774 11 111 111123555655554 321110
Q ss_pred ----------------CeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEc-----CCCCCEEEEEeCCCcEEEEe
Q 046451 278 ----------------SYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWY-----PKIPGVISASSFDGKIGIYN 336 (719)
Q Consensus 278 ----------------~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~s-----pdg~~~las~s~Dg~I~iwd 336 (719)
.-++....+..++|+...+.+..+........+..+.+- ..+ ..|++-..||.|++|.
T Consensus 210 ~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~-~~Lv~l~~~G~i~i~S 288 (395)
T PF08596_consen 210 LATISAMQGLSKGISIPGYVVVVSESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGG-YCLVCLFNNGSIRIYS 288 (395)
T ss_dssp B-BHHHHHGGGGT----EEEEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEE-EEEEEEETTSEEEEEE
T ss_pred cCchhHhhccccCCCcCcEEEEEcccceEEEeCCCCcccceeeccccccceEEEEeecccCCc-eEEEEEECCCcEEEEE
Confidence 123444457789999998877766554332234445553 233 6888888999999999
Q ss_pred CCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCC
Q 046451 337 IEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
+-.-+.+....-.... . .......++..+|.++.|.....
T Consensus 289 LP~Lkei~~~~l~~~~----d---~~~~~~ssis~~Gdi~~~~gpsE 328 (395)
T PF08596_consen 289 LPSLKEIKSVSLPPPL----D---SRRLSSSSISRNGDIFYWTGPSE 328 (395)
T ss_dssp TTT--EEEEEE-SS----------HHHHTT-EE-TTS-EEEE-SSSE
T ss_pred CCCchHhhcccCCCcc----c---cccccccEECCCCCEEEEeCccc
Confidence 9998776633222110 0 11123468899999888875544
No 347
>PF02840 Prp18: Prp18 domain; InterPro: IPR004098 The splicing factor Prp18 is required for the second step of pre-mRNA splicing. PRP18 appears to be primarily associated with the U5 snRNP. The structure of a large fragment of the Saccharomyces cerevisiae Prp18 is known []. This fragment is fully active in yeast splicing in vitro and includes the sequences of Prp18 that have been evolutionarily conserved. The core structure consists of five alpha-helices that adopt a novel fold. The most highly conserved region of Prp18, a nearly invariant stretch of 19 aa, forms part of a loop between two alpha-helices and may interact with the U5 small nuclear ribonucleoprotein particles [].; GO: 0008380 RNA splicing, 0005681 spliceosomal complex; PDB: 1DVK_A.
Probab=97.98 E-value=2.7e-05 Score=69.58 Aligned_cols=101 Identities=20% Similarity=0.298 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCC-------ccchhhhhhHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHhcCChhHHHhh
Q 046451 615 INTLTRLFNETSEALGGSRAN-------PAKKREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDFGTALQI 687 (719)
Q Consensus 615 ~~~l~~~~~~~~~~~~~~~~~-------~~~k~~~~d~~krl~~l~~~l~~~~ls~~~~~~l~~l~~~~~~~~~~~a~~i 687 (719)
...|+..|.+-.+.+...... ......+.++.+.|.-||.+|++++|++++++.|.+++.+++.++|.+|++.
T Consensus 2 ~~~~k~lL~eW~~~l~~r~~~~k~s~~gk~~~~~~~qtk~~l~PL~~~Lk~~~l~~dil~~L~~Iv~~~q~r~y~~And~ 81 (144)
T PF02840_consen 2 RSYIKFLLKEWEEELNSRPEEEKRSAQGKQASATYKQTKRYLKPLFKKLKKRTLPEDILDSLATIVYHLQQREYVKANDA 81 (144)
T ss_dssp HHHHHHHHHHHHHCCCCS-CC------------CHHHHHHHHHHHHHHHHCT-S-HHHHHHHHHHHHHHCCCGHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCChhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 445666666655444321111 1224467899999999999999999999999999999999999999999875
Q ss_pred eeeeec-------------------------CCc-----c-cchhHHHHHHHHHhcccc
Q 046451 688 QVLLTT-------------------------SDW-----D-ECNFWLATLKRMIKTRQN 715 (719)
Q Consensus 688 ~~~l~~-------------------------~~~-----~-e~~~w~~g~k~li~~~~~ 715 (719)
.+.|+. ++. | ....|+.+|||||+.++.
T Consensus 82 Yl~LsIGna~WPIGVt~vGIHeRsareki~~~~vAhimnDE~tRk~iq~iKRLitf~q~ 140 (144)
T PF02840_consen 82 YLKLSIGNAAWPIGVTMVGIHERSAREKIFSSNVAHIMNDETTRKYIQSIKRLITFAQR 140 (144)
T ss_dssp HHHHHTTB----SS---------------------B----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCcceeeeechhhhhHHHHHhccchhHHhccHHHHHHHHHHHHHHHHHHH
Confidence 553321 121 2 345699999999998764
No 348
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.94 E-value=0.011 Score=57.46 Aligned_cols=61 Identities=15% Similarity=0.128 Sum_probs=36.7
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA 155 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~ 155 (719)
++|..|+.|+..+..|.. +. ..+...+.-.+...+-+..+ ....|..+...|.|.--..+.
T Consensus 106 glIycgshd~~~yalD~~------~~---~cVykskcgG~~f~sP~i~~-g~~sly~a~t~G~vlavt~~~ 166 (354)
T KOG4649|consen 106 GLIYCGSHDGNFYALDPK------TY---GCVYKSKCGGGTFVSPVIAP-GDGSLYAAITAGAVLAVTKNP 166 (354)
T ss_pred ceEEEecCCCcEEEeccc------cc---ceEEecccCCceeccceecC-CCceEEEEeccceEEEEccCC
Confidence 799999999999999983 33 55555543333333444455 333444455556655544443
No 349
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.93 E-value=0.017 Score=65.10 Aligned_cols=268 Identities=13% Similarity=0.099 Sum_probs=144.7
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc--ccC--CEEE-EEEeCCCCCEEEEEe------CCCcEEEEcC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR--HKG--PVRG-LEFNSFTPNLLASGA------DDGEICIWDL 153 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~--h~~--~V~~-l~fsp~~~~~lasgs------~dg~I~iwdl 153 (719)
+.|+.++.|+.|.-+|. .++ +.+..... +.. .+.+ -... ++ .|+++. .+|.|..+|.
T Consensus 121 ~~v~v~t~dg~l~ALDa------~TG---k~~W~~~~~~~~~~~~~tssP~v~--~g-~Vivg~~~~~~~~~G~v~AlD~ 188 (527)
T TIGR03075 121 GKVFFGTLDARLVALDA------KTG---KVVWSKKNGDYKAGYTITAAPLVV--KG-KVITGISGGEFGVRGYVTAYDA 188 (527)
T ss_pred CEEEEEcCCCEEEEEEC------CCC---CEEeecccccccccccccCCcEEE--CC-EEEEeecccccCCCcEEEEEEC
Confidence 46777888999999998 455 55544332 110 1111 1111 33 444443 2688999999
Q ss_pred CCCCCCCccCCccCCCC-----------------------CC-CCCeE-EEEecCCCCcEEEEEeCC-----C-------
Q 046451 154 SAPAEPSHFPPLRGNGS-----------------------AA-QGEIS-FVSWNSKVQHILASTSYN-----G------- 196 (719)
Q Consensus 154 ~~~~~~~~~~~l~~~~~-----------------------~h-~~~I~-~l~~sp~g~~~l~s~s~d-----g------- 196 (719)
++++.+-.+........ .+ ...++ .+++.++. .+++.+..+ +
T Consensus 189 ~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~-~lvy~~tGnp~p~~~~~r~gdn 267 (527)
T TIGR03075 189 KTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPET-NLIYFGTGNPSPWNSHLRPGDN 267 (527)
T ss_pred CCCceeEeccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCC-CeEEEeCCCCCCCCCCCCCCCC
Confidence 99887655432221100 00 11121 33566654 355554422 2
Q ss_pred ----cEEEEECCCCceeEEecCCCC--------CceeEEEECCCCC--cEEEEEeCCCCCCcEEEEecCCCCCceEE---
Q 046451 197 ----TTVVWDLKKQKPVISFSESIK--------RRCSVLQWNPDVA--TQLVVASDEDSSPALRLWDMRNTMSPVKE--- 259 (719)
Q Consensus 197 ----~I~iwd~~~~~~~~~~~~~~~--------~~i~~l~~sp~g~--~~l~~~s~d~~~~~I~lwDl~~~~~~~~~--- 259 (719)
.|.-.|+++++....++..+. ....-+.+..+|+ ..++.+..++ .+++.|.++++ .+..
T Consensus 268 l~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G---~~~vlDr~tG~-~i~~~~~ 343 (527)
T TIGR03075 268 LYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNG---FFYVLDRTNGK-LLSAEPF 343 (527)
T ss_pred ccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCc---eEEEEECCCCc-eeccccc
Confidence 677889999998887774111 1112233334554 4566777776 89999987763 3210
Q ss_pred -----e----eCCC------------------CCe-----------eEEEeCCCCCCeEEEEeC----------------
Q 046451 260 -----F----VGHT------------------KGV-----------IAMSWCPNDSSYLLTCAK---------------- 285 (719)
Q Consensus 260 -----~----~~h~------------------~~V-----------~~v~~sp~d~~~l~sgs~---------------- 285 (719)
. .... ..+ ..++++| +..+++....
T Consensus 344 ~~~~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp-~~g~~yvp~~~~~~~~~~~~~~~~~g 422 (527)
T TIGR03075 344 VDTVNWATGVDLKTGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSP-KTGLFYVPANEVCMDYEPEKVSYKKG 422 (527)
T ss_pred cCCcccccccCCCCCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECC-CCCEEEEecccccccccccccccCCC
Confidence 0 0000 000 1144555 3333333222
Q ss_pred -----------------CCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCC
Q 046451 286 -----------------DNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDS 348 (719)
Q Consensus 286 -----------------Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~ 348 (719)
-|.|.-+|+.+|+.+.+.........+... -.+ .+++.++.||.++.+|.++++.+-..+.
T Consensus 423 ~~~~~~~~~~~p~~~~~~g~l~AiD~~tGk~~W~~~~~~p~~~~~l~-t~g-~lvf~g~~~G~l~a~D~~TGe~lw~~~~ 500 (527)
T TIGR03075 423 AAYLGAGLTIKPPPDDHMGSLIAWDPITGKIVWEHKEDFPLWGGVLA-TAG-DLVFYGTLEGYFKAFDAKTGEELWKFKT 500 (527)
T ss_pred CceeccccccCCCCCCCceeEEEEeCCCCceeeEecCCCCCCCcceE-ECC-cEEEEECCCCeEEEEECCCCCEeEEEeC
Confidence 246888888899888776543322222222 234 4777788899999999999988653322
Q ss_pred CCCCCCccCcceecCCCceeeeeCCcEEEEccCC
Q 046451 349 NFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKS 382 (719)
Q Consensus 349 ~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~ 382 (719)
.....- .-+++..|||..++...+
T Consensus 501 --g~~~~a--------~P~ty~~~G~qYv~~~~G 524 (527)
T TIGR03075 501 --GSGIVG--------PPVTYEQDGKQYVAVLSG 524 (527)
T ss_pred --CCCcee--------cCEEEEeCCEEEEEEEec
Confidence 111001 125667899987665443
No 350
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.88 E-value=0.011 Score=65.00 Aligned_cols=251 Identities=10% Similarity=0.066 Sum_probs=132.6
Q ss_pred ceeeeecCCCCCCCCCccceEEEE-cCCC----cEEEEcCCccccCCCCCCCCceee-eccccCCEEEEEEeCCCCCEEE
Q 046451 67 FNRLAWGKNGSGSEDFSLGLVAGG-LVDG----SIDIWNPLSLISSGETGGNPLIAH-LSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 67 V~~l~~sp~g~~~~~~~~~~lasg-s~dg----~I~lwd~~~~~~~~~~~~~~~~~~-l~~h~~~V~~l~fsp~~~~~la 140 (719)
+..+.+++++ ++||.+ +..| .|+++|+ .++ +.+.. +... ....+.|.. +++.|+
T Consensus 126 ~~~~~~Spdg--------~~la~~~s~~G~e~~~l~v~Dl------~tg---~~l~d~i~~~--~~~~~~W~~-d~~~~~ 185 (414)
T PF02897_consen 126 LGGFSVSPDG--------KRLAYSLSDGGSEWYTLRVFDL------ETG---KFLPDGIENP--KFSSVSWSD-DGKGFF 185 (414)
T ss_dssp EEEEEETTTS--------SEEEEEEEETTSSEEEEEEEET------TTT---EEEEEEEEEE--ESEEEEECT-TSSEEE
T ss_pred eeeeeECCCC--------CEEEEEecCCCCceEEEEEEEC------CCC---cCcCCccccc--ccceEEEeC-CCCEEE
Confidence 3467889998 455543 4444 4999999 344 33322 2211 112399998 555554
Q ss_pred EEeCCC-----------cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC---CcEEEEECCCC
Q 046451 141 SGADDG-----------EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN---GTTVVWDLKKQ 206 (719)
Q Consensus 141 sgs~dg-----------~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d---g~I~iwd~~~~ 206 (719)
....+. .|+.|++.+......+. +.... .......+..+.++..+++..... ..+++.|+..+
T Consensus 186 y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lv-fe~~~--~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 186 YTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELV-FEEPD--EPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp EEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEE-EC-TT--CTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred EEEeCcccccccCCCCcEEEEEECCCChHhCeeE-EeecC--CCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence 443322 37888887765431110 22211 111367888899986555555443 34888888874
Q ss_pred ----ceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC--ceEEeeCCCCC--eeEEEeCCCCCC
Q 046451 207 ----KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS--PVKEFVGHTKG--VIAMSWCPNDSS 278 (719)
Q Consensus 207 ----~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~--~~~~~~~h~~~--V~~v~~sp~d~~ 278 (719)
.....+..........+... +..+++....+...+.|...++.+... ....+..+... +..+... ++.
T Consensus 263 ~~~~~~~~~l~~~~~~~~~~v~~~--~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~ 338 (414)
T PF02897_consen 263 GSPDAKPKLLSPREDGVEYYVDHH--GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLF--KDY 338 (414)
T ss_dssp TTSS-SEEEEEESSSS-EEEEEEE--TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEE--TTE
T ss_pred CCCcCCcEEEeCCCCceEEEEEcc--CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEE--CCE
Confidence 22333331233333444444 335666665555556787788876532 12355556553 4555543 334
Q ss_pred eEEEEeCCC--cEEEEECCCCeEEEEecC-CCCCeEEeEEcCCCCCEEEEEeC---CCcEEEEeCCCCcccc
Q 046451 279 YLLTCAKDN--RTICWDTVSGEIVSELPA-GTNWNFDIHWYPKIPGVISASSF---DGKIGIYNIEGCSRYG 344 (719)
Q Consensus 279 ~l~sgs~Dg--~I~iwd~~~~~~~~~l~~-h~~~v~~l~~spdg~~~las~s~---Dg~I~iwd~~~~~~~~ 344 (719)
+++....++ .|++||+..+.....+.. ..+.|..+....++..+.++.+. -++|..||+.+++...
T Consensus 339 Lvl~~~~~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~~ 410 (414)
T PF02897_consen 339 LVLSYRENGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELTL 410 (414)
T ss_dssp EEEEEEETTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEEE
T ss_pred EEEEEEECCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEEE
Confidence 555555554 588999983454444433 33346666666666555555443 2688999999887643
No 351
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=97.87 E-value=0.0036 Score=70.23 Aligned_cols=284 Identities=11% Similarity=0.058 Sum_probs=148.5
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccC------CE--EEEEEeCCCCCEEEEEeCCCcEEEEcCCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKG------PV--RGLEFNSFTPNLLASGADDGEICIWDLSAP 156 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~------~V--~~l~fsp~~~~~lasgs~dg~I~iwdl~~~ 156 (719)
+.|+.++.++.|.-+|. .++ +.+..+..... .+ ..+.+. ++..++.++.++.|+.+|.+++
T Consensus 62 g~vy~~~~~g~l~AlD~------~tG---~~~W~~~~~~~~~~~~~~~~~~g~~~~--~~~~V~v~~~~g~v~AlD~~TG 130 (488)
T cd00216 62 GDMYFTTSHSALFALDA------ATG---KVLWRYDPKLPADRGCCDVVNRGVAYW--DPRKVFFGTFDGRLVALDAETG 130 (488)
T ss_pred CEEEEeCCCCcEEEEEC------CCC---hhhceeCCCCCccccccccccCCcEEc--cCCeEEEecCCCeEEEEECCCC
Confidence 46777888899999998 444 44444332221 01 111221 2267888889999999999998
Q ss_pred CCCCccCCccCCCCCCCCCe-EEEEecCCCCcEEEEEe---------CCCcEEEEECCCCceeEEecCCCCCc-------
Q 046451 157 AEPSHFPPLRGNGSAAQGEI-SFVSWNSKVQHILASTS---------YNGTTVVWDLKKQKPVISFSESIKRR------- 219 (719)
Q Consensus 157 ~~~~~~~~l~~~~~~h~~~I-~~l~~sp~g~~~l~s~s---------~dg~I~iwd~~~~~~~~~~~~~~~~~------- 219 (719)
+....+..... .. ....+ ....+.. + +++.++ .+|.|+.+|..+++.+..+.......
T Consensus 131 ~~~W~~~~~~~-~~-~~~~i~ssP~v~~-~--~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~ 205 (488)
T cd00216 131 KQVWKFGNNDQ-VP-PGYTMTGAPTIVK-K--LVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWG 205 (488)
T ss_pred CEeeeecCCCC-cC-cceEecCCCEEEC-C--EEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCC
Confidence 87654321100 00 00001 1112221 2 444443 36889999999999888776321100
Q ss_pred ------------e-eEEEECCCCCcEEEEEeCCC---------------CCCcEEEEecCCCCCceEEee--CCCCC---
Q 046451 220 ------------C-SVLQWNPDVATQLVVASDED---------------SSPALRLWDMRNTMSPVKEFV--GHTKG--- 266 (719)
Q Consensus 220 ------------i-~~l~~sp~g~~~l~~~s~d~---------------~~~~I~lwDl~~~~~~~~~~~--~h~~~--- 266 (719)
+ ...++++.+. ++++++.++ ..+.|.-+|+++++. +-.+. .|...
T Consensus 206 ~~~~~~~~~g~~vw~~pa~d~~~g-~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~-~W~~~~~~~~~~~~~ 283 (488)
T cd00216 206 PDRQMWGPGGGTSWASPTYDPKTN-LVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKV-KWFYQTTPHDLWDYD 283 (488)
T ss_pred CCcceecCCCCCccCCeeEeCCCC-EEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCE-EEEeeCCCCCCcccc
Confidence 0 1233443333 455554332 122688889887643 32222 12110
Q ss_pred -eeEEEeC---CCCCC---eEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEE--------------
Q 046451 267 -VIAMSWC---PNDSS---YLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISA-------------- 325 (719)
Q Consensus 267 -V~~v~~s---p~d~~---~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las-------------- 325 (719)
.....+. ..++. +++.++.+|.+..+|.++|+.+....... ..+..++ + .+++.
T Consensus 284 ~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~---~~~~~~~-~-~vyv~~~~~~~~~~~~~~~ 358 (488)
T cd00216 284 GPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE---QPMAYDP-G-LVYLGAFHIPLGLPPQKKK 358 (488)
T ss_pred cCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeec---cccccCC-c-eEEEccccccccCcccccC
Confidence 0000111 01333 67888899999999999999987764321 1123333 2 22221
Q ss_pred ---EeCCCcEEEEeCCCCcccccCCCCC-------CCCCccCcceecCCCceeeeeCCcEEEEccCCCCCcccccc
Q 046451 326 ---SSFDGKIGIYNIEGCSRYGVGDSNF-------SAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSSAGHTSENS 391 (719)
Q Consensus 326 ---~s~Dg~I~iwd~~~~~~~~~~~~~~-------~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~~~~~~~~~ 391 (719)
...+|.|.-.|+.+++.+=..+... .......+...........+.+|++.+|+.++++.+|+...
T Consensus 359 ~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 359 RCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKELWKFRT 434 (488)
T ss_pred CCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence 1235677777887777644222110 00000011111112223346789999999999988877543
No 352
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.86 E-value=0.0044 Score=67.73 Aligned_cols=223 Identities=14% Similarity=0.192 Sum_probs=115.4
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasg 142 (719)
.......+.++|++ +++++ +.||...|+... ..... ..+.-....|.. .+.+|+-
T Consensus 31 ~~~~p~~ls~npng--------r~v~V-~g~geY~iyt~~-----------~~r~k---~~G~g~~~vw~~--~n~yAv~ 85 (443)
T PF04053_consen 31 CEIYPQSLSHNPNG--------RFVLV-CGDGEYEIYTAL-----------AWRNK---AFGSGLSFVWSS--RNRYAVL 85 (443)
T ss_dssp -SS--SEEEE-TTS--------SEEEE-EETTEEEEEETT-----------TTEEE---EEEE-SEEEE-T--SSEEEEE
T ss_pred CCcCCeeEEECCCC--------CEEEE-EcCCEEEEEEcc-----------CCccc---ccCceeEEEEec--CccEEEE
Confidence 34456789999998 56666 558888888742 11111 123445778877 4557777
Q ss_pred eCCCcEEEE-cCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCcee
Q 046451 143 ADDGEICIW-DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCS 221 (719)
Q Consensus 143 s~dg~I~iw-dl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~ 221 (719)
..+++|.|+ ++.. .....+ +. ...+..|-. | .+|+..+.+ .|.+||+.+++.+.++. .. .|.
T Consensus 86 ~~~~~I~I~kn~~~-~~~k~i---~~-----~~~~~~If~---G-~LL~~~~~~-~i~~yDw~~~~~i~~i~--v~-~vk 148 (443)
T PF04053_consen 86 ESSSTIKIYKNFKN-EVVKSI---KL-----PFSVEKIFG---G-NLLGVKSSD-FICFYDWETGKLIRRID--VS-AVK 148 (443)
T ss_dssp -TTS-EEEEETTEE--TT-------------SS-EEEEE----S-SSEEEEETT-EEEEE-TTT--EEEEES--S--E-E
T ss_pred ECCCeEEEEEcCcc-ccceEE---cC-----CcccceEEc---C-cEEEEECCC-CEEEEEhhHcceeeEEe--cC-CCc
Confidence 778999996 4433 222221 11 112333332 5 456555544 89999999999999987 22 389
Q ss_pred EEEECCCCCcEEEEEeCCCCCCcEEEEecCCC---------C-CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEE
Q 046451 222 VLQWNPDVATQLVVASDEDSSPALRLWDMRNT---------M-SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC 291 (719)
Q Consensus 222 ~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~---------~-~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~i 291 (719)
.+.|+++|+ +++..+.+ .+.|++.... . ..+..+..-...|.+.+|.- + .|+-.+.. +|+.
T Consensus 149 ~V~Ws~~g~-~val~t~~----~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~-d--~fiYtT~~-~lkY 219 (443)
T PF04053_consen 149 YVIWSDDGE-LVALVTKD----SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVE-D--CFIYTTSN-HLKY 219 (443)
T ss_dssp EEEE-TTSS-EEEEE-S-----SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEET-T--EEEEE-TT-EEEE
T ss_pred EEEEECCCC-EEEEEeCC----eEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEc-C--EEEEEcCC-eEEE
Confidence 999999985 56666666 4888775421 0 02333333256888889964 3 44433333 6766
Q ss_pred EECCCCeE--EEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 292 WDTVSGEI--VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 292 wd~~~~~~--~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
+..|+. +..+ ...++=+...++. +.+.....|+.|..+.+.....
T Consensus 220 --l~~Ge~~~i~~l---d~~~yllgy~~~~-~~ly~~Dr~~~v~~~~ld~~~~ 266 (443)
T PF04053_consen 220 --LVNGETGIIAHL---DKPLYLLGYLPKE-NRLYLIDRDGNVISYELDLSEL 266 (443)
T ss_dssp --EETTEEEEEEE----SS--EEEEEETTT-TEEEEE-TT--EEEEE--HHHH
T ss_pred --EEcCCcceEEEc---CCceEEEEEEccC-CEEEEEECCCCEEEEEECHHHH
Confidence 334442 3333 3446667777765 5788888888888888776543
No 353
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=97.86 E-value=0.024 Score=64.89 Aligned_cols=264 Identities=16% Similarity=0.089 Sum_probs=139.6
Q ss_pred ecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceee--ecc--ccCCEEEEEEeC
Q 046451 58 VGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH--LSR--HKGPVRGLEFNS 133 (719)
Q Consensus 58 ~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~--l~~--h~~~V~~l~fsp 133 (719)
......+..|.|+.++|.+++. +..++++.|..+..+.+.-.. .+. ..+.. +.+ -...|.-..|--
T Consensus 524 ~~~~~~e~evaCLDisp~~d~~--~~s~~~aVG~Ws~~~~~l~~~-----pd~---~~~~~~~l~~~~iPRSIl~~~~e~ 593 (1096)
T KOG1897|consen 524 VSHKEFEYEVACLDISPLGDAP--NKSRLLAVGLWSDISMILTFL-----PDL---ILITHEQLSGEIIPRSILLTTFEG 593 (1096)
T ss_pred eeeheecceeEEEecccCCCCC--CcceEEEEEeecceEEEEEEC-----CCc---ceeeeeccCCCccchheeeEEeec
Confidence 3445567889999999886533 122589999988877665442 111 11111 111 123444445544
Q ss_pred CCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec
Q 046451 134 FTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS 213 (719)
Q Consensus 134 ~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~ 213 (719)
|..+|.++..||.+.-|.+........- .+... -....+.--.|+..+...++ +..|.-..+|..+..-+...+.
T Consensus 594 -d~~yLlvalgdG~l~~fv~d~~tg~lsd--~Kk~~-lGt~P~~Lr~f~sk~~t~vf-a~sdrP~viY~~n~kLv~spls 668 (1096)
T KOG1897|consen 594 -DIHYLLVALGDGALLYFVLDINTGQLSD--RKKVT-LGTQPISLRTFSSKSRTAVF-ALSDRPTVIYSSNGKLVYSPLS 668 (1096)
T ss_pred -cceEEEEEcCCceEEEEEEEcccceEcc--ccccc-cCCCCcEEEEEeeCCceEEE-EeCCCCEEEEecCCcEEEeccc
Confidence 5789999999999987655543322110 11111 11335666677766544443 4455556666544332222222
Q ss_pred CCCCCceeEEEECCCC-CcEEEEEeCCCCCCcEEEEecCCCCC-ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCC-----
Q 046451 214 ESIKRRCSVLQWNPDV-ATQLVVASDEDSSPALRLWDMRNTMS-PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD----- 286 (719)
Q Consensus 214 ~~~~~~i~~l~~sp~g-~~~l~~~s~d~~~~~I~lwDl~~~~~-~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~D----- 286 (719)
....-..+.|+.+. ...++.+..+ .+++.-+..-.+ -++++.- ......+++.+ ....+.+.+..
T Consensus 669 --~kev~~~c~f~s~a~~d~l~~~~~~----~l~i~tid~iqkl~irtvpl-~~~prrI~~q~-~sl~~~v~s~r~e~~~ 740 (1096)
T KOG1897|consen 669 --LKEVNHMCPFNSDAYPDSLASANGG----ALTIGTIDEIQKLHIRTVPL-GESPRRICYQE-SSLTFGVLSNRIESSA 740 (1096)
T ss_pred --hHHhhhhcccccccCCceEEEecCC----ceEEEEecchhhcceeeecC-CCChhheEecc-cceEEEEEecccccch
Confidence 11111222343332 2235555554 477776643322 2333332 23456677765 33444443321
Q ss_pred ---------CcEEEEECCCCeEEEEecCCC----CCeEEeEEcCCCCCEEEEEeC----------CCcEEEEeCCC-Ccc
Q 046451 287 ---------NRTICWDTVSGEIVSELPAGT----NWNFDIHWYPKIPGVISASSF----------DGKIGIYNIEG-CSR 342 (719)
Q Consensus 287 ---------g~I~iwd~~~~~~~~~l~~h~----~~v~~l~~spdg~~~las~s~----------Dg~I~iwd~~~-~~~ 342 (719)
..++++|-++.+.+...+-.. -.|.++.|..|...+++.|.. .|+|.||.++. +++
T Consensus 741 ~~~~ee~~~s~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L 820 (1096)
T KOG1897|consen 741 EYYGEEYEVSFLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSL 820 (1096)
T ss_pred hhcCCcceEEEEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCce
Confidence 247788887777655443211 135556699885467777653 58999999988 444
Q ss_pred cc
Q 046451 343 YG 344 (719)
Q Consensus 343 ~~ 344 (719)
..
T Consensus 821 ~~ 822 (1096)
T KOG1897|consen 821 EL 822 (1096)
T ss_pred ee
Confidence 33
No 354
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.81 E-value=0.0011 Score=71.14 Aligned_cols=85 Identities=8% Similarity=0.011 Sum_probs=58.8
Q ss_pred EeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCC----eEEeEEcCC--------------CC
Q 046451 259 EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNW----NFDIHWYPK--------------IP 320 (719)
Q Consensus 259 ~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~----v~~l~~spd--------------g~ 320 (719)
.+......+.+|+.+| ++.+.++...-|+|.++|+.++..++.+++-.+. +....-... .-
T Consensus 302 ~l~D~~R~~~~i~~sP-~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l 380 (415)
T PF14655_consen 302 GLPDSKREGESICLSP-SGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFAL 380 (415)
T ss_pred eeccCCceEEEEEECC-CCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceE
Confidence 3444556788999999 7888888878899999999999888887765431 111111110 11
Q ss_pred CEEEEEeCCCcEEEEeCCCCcccc
Q 046451 321 GVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 321 ~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
.+++-.-.-|.|.||++..+..+.
T Consensus 381 ~LvIyaprRg~lEvW~~~~g~Rv~ 404 (415)
T PF14655_consen 381 FLVIYAPRRGILEVWSMRQGPRVA 404 (415)
T ss_pred EEEEEeccCCeEEEEecCCCCEEE
Confidence 134445667899999999987765
No 355
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.80 E-value=0.0029 Score=65.16 Aligned_cols=271 Identities=12% Similarity=0.127 Sum_probs=137.7
Q ss_pred cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecc--cCCCCCceeeeecCCCCCCCCCccceE
Q 046451 10 SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE--SPSSERFNRLAWGKNGSGSEDFSLGLV 87 (719)
Q Consensus 10 V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~--~~~~~~V~~l~~sp~g~~~~~~~~~~l 87 (719)
...+..||||+.+.+.+.--.=...-.....|.+||..+-....++.+-.. .......+.++++.|+ +++
T Consensus 38 ~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dg--------k~~ 109 (342)
T PF06433_consen 38 LGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADG--------KFL 109 (342)
T ss_dssp SEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTS--------SEE
T ss_pred CCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCC--------cEE
Confidence 345778999998876532100000012234578999886554444433211 1111233445666666 444
Q ss_pred EEEc--CCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 88 AGGL--VDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 88 asgs--~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+... -.-+|.|.|+ ... +.+..+. -.++ .-.-|...+.|.+-|.||.+.-..+........-. -
T Consensus 110 ~V~N~TPa~SVtVVDl------~~~---kvv~ei~-~PGC---~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~-t 175 (342)
T PF06433_consen 110 YVQNFTPATSVTVVDL------AAK---KVVGEID-TPGC---WLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKS-T 175 (342)
T ss_dssp EEEEESSSEEEEEEET------TTT---EEEEEEE-GTSE---EEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEE-E
T ss_pred EEEccCCCCeEEEEEC------CCC---ceeeeec-CCCE---EEEEecCCCceEEEecCCceEEEEECCCCCEeEee-c
Confidence 4432 2356777777 223 3333332 1221 12223345678889999999998888543322110 0
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeE--EecCC---------CCCceeEEEECCCCCcEEE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVI--SFSES---------IKRRCSVLQWNPDVATQLV 234 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~--~~~~~---------~~~~i~~l~~sp~g~~~l~ 234 (719)
.......+..+..-.+...+. .++--+.+|.|+-.|+....... .+... -.+.-.-+++++....+++
T Consensus 176 ~~F~~~~dp~f~~~~~~~~~~-~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyv 254 (342)
T PF06433_consen 176 KVFDPDDDPLFEHPAYSRDGG-RLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYV 254 (342)
T ss_dssp EESSTTTS-B-S--EEETTTT-EEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEE
T ss_pred cccCCCCcccccccceECCCC-eEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEE
Confidence 111111111222333444433 45557889999999987664322 11100 0122344778776555544
Q ss_pred EEeCCCC-------CCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe-CCCcEEEEECCCCeEEEEecCC
Q 046451 235 VASDEDS-------SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA-KDNRTICWDTVSGEIVSELPAG 306 (719)
Q Consensus 235 ~~s~d~~-------~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~~~~~~~~l~~h 306 (719)
.-. .+. .-.|.+||+.+. +.+..+.. ...+.+|..+.++.-+|++.+ .++.|.+||..+|+.+.+++.-
T Consensus 255 LMh-~g~~gsHKdpgteVWv~D~~t~-krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~l 331 (342)
T PF06433_consen 255 LMH-QGGEGSHKDPGTEVWVYDLKTH-KRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQL 331 (342)
T ss_dssp EEE-E--TT-TTS-EEEEEEEETTTT-EEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---
T ss_pred Eec-CCCCCCccCCceEEEEEECCCC-eEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhcc
Confidence 332 221 125888888765 44555542 235779999985555776554 5799999999999999988753
No 356
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.69 E-value=0.0059 Score=70.38 Aligned_cols=147 Identities=12% Similarity=0.037 Sum_probs=96.2
Q ss_pred ceEEEE-cCCCcEEEEcCCccccCCCCCCCCceeeeccccCC-EEEEEEeC----CCCCEEEEEeCCCcEEEEcCCCCCC
Q 046451 85 GLVAGG-LVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGP-VRGLEFNS----FTPNLLASGADDGEICIWDLSAPAE 158 (719)
Q Consensus 85 ~~lasg-s~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~-V~~l~fsp----~~~~~lasgs~dg~I~iwdl~~~~~ 158 (719)
.+|+.. .....|+-.|+ ..| +.+.....|... |..++=.. .+....+.|-.+..|+.||.+-...
T Consensus 494 ~mil~~~~~~~~ly~mDL------e~G---KVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~ 564 (794)
T PF08553_consen 494 NMILLDPNNPNKLYKMDL------ERG---KVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGN 564 (794)
T ss_pred ceEeecCCCCCceEEEec------CCC---cEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCC
Confidence 344443 34567888888 566 777777766654 55543321 1234556678888999999986542
Q ss_pred CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeC
Q 046451 159 PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASD 238 (719)
Q Consensus 159 ~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~ 238 (719)
.... -............|++-+.+| .||+|+.+|.|++||-- ++...+...+.+..|..|+.+.||+++|++|-.
T Consensus 565 k~v~--~~~k~Y~~~~~Fs~~aTt~~G--~iavgs~~G~IRLyd~~-g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~t 639 (794)
T PF08553_consen 565 KLVD--SQSKQYSSKNNFSCFATTEDG--YIAVGSNKGDIRLYDRL-GKRAKTALPGLGDPIIGIDVTADGKWILATCKT 639 (794)
T ss_pred ceee--ccccccccCCCceEEEecCCc--eEEEEeCCCcEEeeccc-chhhhhcCCCCCCCeeEEEecCCCcEEEEeecc
Confidence 1110 111112334578888888887 79999999999999954 433333333678999999999999766655544
Q ss_pred CCCCCcEEEEec
Q 046451 239 EDSSPALRLWDM 250 (719)
Q Consensus 239 d~~~~~I~lwDl 250 (719)
.|.|+|.
T Consensus 640 -----yLlLi~t 646 (794)
T PF08553_consen 640 -----YLLLIDT 646 (794)
T ss_pred -----eEEEEEE
Confidence 5778775
No 357
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.68 E-value=0.032 Score=60.39 Aligned_cols=204 Identities=17% Similarity=0.193 Sum_probs=137.7
Q ss_pred EEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe--CCCcEEEEEC
Q 046451 126 VRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS--YNGTTVVWDL 203 (719)
Q Consensus 126 V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s--~dg~I~iwd~ 203 (719)
-.++.+++.+.+.++....++.|.+.|..+....... ..+ ..-..+++++++..+.++-. .++++.+.|.
T Consensus 76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~--~vG------~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~ 147 (381)
T COG3391 76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSI--PVG------LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDA 147 (381)
T ss_pred ccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEe--eec------cCCceEEECCCCCEEEEEecccCCceEEEEeC
Confidence 3567787745556677767799999997766654432 111 15568899999876666655 4789999999
Q ss_pred CCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEE----eeCCCCCeeEEEeCCCCCCe
Q 046451 204 KKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE----FVGHTKGVIAMSWCPNDSSY 279 (719)
Q Consensus 204 ~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~----~~~h~~~V~~v~~sp~d~~~ 279 (719)
.+++.+.+... .... ..++++++|...+++-..++ .|.+.|.... ...+. ...-...-..+.+++ ++.+
T Consensus 148 ~t~~~~~~~~v-G~~P-~~~a~~p~g~~vyv~~~~~~---~v~vi~~~~~-~v~~~~~~~~~~~~~~P~~i~v~~-~g~~ 220 (381)
T COG3391 148 ATNKVTATIPV-GNTP-TGVAVDPDGNKVYVTNSDDN---TVSVIDTSGN-SVVRGSVGSLVGVGTGPAGIAVDP-DGNR 220 (381)
T ss_pred CCCeEEEEEec-CCCc-ceEEECCCCCeEEEEecCCC---eEEEEeCCCc-ceeccccccccccCCCCceEEECC-CCCE
Confidence 99988888552 2233 88999999976666665555 8999997653 22210 111223346788999 6765
Q ss_pred EEEEeC-C--CcEEEEECCCCeEEEE-ecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 280 LLTCAK-D--NRTICWDTVSGEIVSE-LPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 280 l~sgs~-D--g~I~iwd~~~~~~~~~-l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+..... + +.+.+.|..++..... +.........+.++|+|..+.+.-+..+.+.+-|..+.....
T Consensus 221 ~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~ 289 (381)
T COG3391 221 VYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVK 289 (381)
T ss_pred EEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceee
Confidence 554433 3 5999999988877665 222221567889999995444444556899999998877766
No 358
>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]
Probab=97.67 E-value=0.0003 Score=77.38 Aligned_cols=7 Identities=29% Similarity=0.543 Sum_probs=3.3
Q ss_pred HHHHHHH
Q 046451 620 RLFNETS 626 (719)
Q Consensus 620 ~~~~~~~ 626 (719)
+.|.+|.
T Consensus 657 dlfakL~ 663 (1102)
T KOG1924|consen 657 DLFAKLA 663 (1102)
T ss_pred HHHHHHH
Confidence 3445544
No 359
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.66 E-value=0.0029 Score=65.17 Aligned_cols=247 Identities=13% Similarity=0.086 Sum_probs=132.8
Q ss_pred eeeecCCCCCCCCCccceEEEE----------cCCCcEEEEcCCccccCCCCCCCCceeeecccc----CCEEEEEEeCC
Q 046451 69 RLAWGKNGSGSEDFSLGLVAGG----------LVDGSIDIWNPLSLISSGETGGNPLIAHLSRHK----GPVRGLEFNSF 134 (719)
Q Consensus 69 ~l~~sp~g~~~~~~~~~~lasg----------s~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~----~~V~~l~fsp~ 134 (719)
.+..++++ +.+++. -+...|.+||..++.... .+..-.+|. .....+.++.
T Consensus 40 ~~~~spdg--------k~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~------EI~iP~k~R~~~~~~~~~~~ls~- 104 (342)
T PF06433_consen 40 NVALSPDG--------KTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTG------EIEIPPKPRAQVVPYKNMFALSA- 104 (342)
T ss_dssp EEEE-TTS--------SEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEE------EEEETTS-B--BS--GGGEEE-T-
T ss_pred ceeECCCC--------CEEEEEEEEEeccccccceeEEEEEecCcCcccc------eEecCCcchheecccccceEEcc-
Confidence 46678887 455542 345579999996543210 011101101 1223456666
Q ss_pred CCCEEEEEe--CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC-CCceeEE
Q 046451 135 TPNLLASGA--DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK-KQKPVIS 211 (719)
Q Consensus 135 ~~~~lasgs--~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~-~~~~~~~ 211 (719)
|++++++.. ---.|.|.|+...+...++. .. . |....|.+..-|.+-|.||.+....+. .|+...+
T Consensus 105 dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~-~P--------G--C~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~ 173 (342)
T PF06433_consen 105 DGKFLYVQNFTPATSVTVVDLAAKKVVGEID-TP--------G--CWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQK 173 (342)
T ss_dssp TSSEEEEEEESSSEEEEEEETTTTEEEEEEE-GT--------S--EEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEE
T ss_pred CCcEEEEEccCCCCeEEEEECCCCceeeeec-CC--------C--EEEEEecCCCceEEEecCCceEEEEECCCCCEeEe
Confidence 667666543 34568888888877654431 11 1 222334444568889999999999988 4554322
Q ss_pred ec---CCCCC-ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC-ceEEeeCC----------CCCeeEEEeCCCC
Q 046451 212 FS---ESIKR-RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS-PVKEFVGH----------TKGVIAMSWCPND 276 (719)
Q Consensus 212 ~~---~~~~~-~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~-~~~~~~~h----------~~~V~~v~~sp~d 276 (719)
.. ..... .+..-++...+.. ++--+.+| .|+-.|+..... ....+..- .++-.-+++++ .
T Consensus 174 ~t~~F~~~~dp~f~~~~~~~~~~~-~~F~Sy~G---~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~-~ 248 (342)
T PF06433_consen 174 STKVFDPDDDPLFEHPAYSRDGGR-LYFVSYEG---NVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHA-A 248 (342)
T ss_dssp EEEESSTTTS-B-S--EEETTTTE-EEEEBTTS---EEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEET-T
T ss_pred eccccCCCCcccccccceECCCCe-EEEEecCC---EEEEEeccCCcccccCcccccCccccccCcCCcceeeeeecc-c
Confidence 11 11122 2223334444433 44355555 688777764321 11111110 12334467776 4
Q ss_pred CCeEEEEe---C-----CC--cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEE-eCCCcEEEEeCCCCccccc
Q 046451 277 SSYLLTCA---K-----DN--RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISAS-SFDGKIGIYNIEGCSRYGV 345 (719)
Q Consensus 277 ~~~l~sgs---~-----Dg--~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~-s~Dg~I~iwd~~~~~~~~~ 345 (719)
.+.|++.- . |+ .|-+||+.+++.+.++... ..+.+|..+.+..-+|++. ..++.|.|||..+++.+..
T Consensus 249 ~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~-~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~ 327 (342)
T PF06433_consen 249 SGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLE-HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRS 327 (342)
T ss_dssp TTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEE-EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEE
T ss_pred cCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCC-CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEee
Confidence 44444322 1 22 4777799999999998753 3477999999885566554 4589999999999998774
Q ss_pred CC
Q 046451 346 GD 347 (719)
Q Consensus 346 ~~ 347 (719)
.+
T Consensus 328 ~~ 329 (342)
T PF06433_consen 328 IE 329 (342)
T ss_dssp E-
T ss_pred hh
Confidence 43
No 360
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.62 E-value=0.034 Score=60.25 Aligned_cols=191 Identities=15% Similarity=0.072 Sum_probs=129.2
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC
Q 046451 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM 254 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~ 254 (719)
.-..++.++.+.+.++....++.|.+.|..+.+...... .......++++++++.++++-... ..+++.+.|-.+.
T Consensus 75 ~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~--vG~~P~~~~~~~~~~~vYV~n~~~-~~~~vsvid~~t~- 150 (381)
T COG3391 75 YPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIP--VGLGPVGLAVDPDGKYVYVANAGN-GNNTVSVIDAATN- 150 (381)
T ss_pred cccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEee--eccCCceEEECCCCCEEEEEeccc-CCceEEEEeCCCC-
Confidence 345778888887677777778999999988888877776 333778899999997666666632 1238999998765
Q ss_pred CceEEeeCCCCCeeEEEeCCCCCCeEEEE-eCCCcEEEEECCCCeEEE-E----ecCCCCCeEEeEEcCCCCCEEEEEeC
Q 046451 255 SPVKEFVGHTKGVIAMSWCPNDSSYLLTC-AKDNRTICWDTVSGEIVS-E----LPAGTNWNFDIHWYPKIPGVISASSF 328 (719)
Q Consensus 255 ~~~~~~~~h~~~V~~v~~sp~d~~~l~sg-s~Dg~I~iwd~~~~~~~~-~----l~~h~~~v~~l~~spdg~~~las~s~ 328 (719)
+.+.+...-..+ ..+++.+ ++..++.+ ..++.|.++|........ . +..+ ..-..+.++++|.++.++...
T Consensus 151 ~~~~~~~vG~~P-~~~a~~p-~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~-~~P~~i~v~~~g~~~yV~~~~ 227 (381)
T COG3391 151 KVTATIPVGNTP-TGVAVDP-DGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVG-TGPAGIAVDPDGNRVYVANDG 227 (381)
T ss_pred eEEEEEecCCCc-ceEEECC-CCCeEEEEecCCCeEEEEeCCCcceeccccccccccC-CCCceEEECCCCCEEEEEecc
Confidence 334443332234 8899999 77755544 588999999987665553 1 2222 235778999999656666555
Q ss_pred C--CcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCC
Q 046451 329 D--GKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKS 382 (719)
Q Consensus 329 D--g~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~ 382 (719)
+ +.+.+.|..++....... ....+ .+.++.+.++|+.+......
T Consensus 228 ~~~~~v~~id~~~~~v~~~~~--------~~~~~--~~~~v~~~p~g~~~yv~~~~ 273 (381)
T COG3391 228 SGSNNVLKIDTATGNVTATDL--------PVGSG--APRGVAVDPAGKAAYVANSQ 273 (381)
T ss_pred CCCceEEEEeCCCceEEEecc--------ccccC--CCCceeECCCCCEEEEEecC
Confidence 4 689999998887765210 11112 34567788888876666444
No 361
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.61 E-value=0.012 Score=57.35 Aligned_cols=150 Identities=10% Similarity=-0.001 Sum_probs=98.1
Q ss_pred EecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEE
Q 046451 180 SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE 259 (719)
Q Consensus 180 ~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~ 259 (719)
...++...+++.|+..+.+.-.|..+++.+.+.. ...+|.+-+.- -| .+++.|...+ .+++.+.+++.. +..
T Consensus 17 VV~~dskT~v~igSHs~~~~avd~~sG~~~We~i--lg~RiE~sa~v-vg-dfVV~GCy~g---~lYfl~~~tGs~-~w~ 88 (354)
T KOG4649|consen 17 VVCNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAI--LGVRIECSAIV-VG-DFVVLGCYSG---GLYFLCVKTGSQ-IWN 88 (354)
T ss_pred EEecCCceEEEEecCCceEEEecCCCCcEEeehh--hCceeeeeeEE-EC-CEEEEEEccC---cEEEEEecchhh-eee
Confidence 3345546789999999999999999999887765 44555444433 23 3578888877 799999988743 333
Q ss_pred eeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcC-CCCCEEEEEeCCCcEEEEeCC
Q 046451 260 FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYP-KIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 260 ~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~sp-dg~~~las~s~Dg~I~iwd~~ 338 (719)
+.....--......+ ++.++.+++.|+..+..|.++..++...+.......+-+..+ ++ .+.+ +...|.+.--+..
T Consensus 89 f~~~~~vk~~a~~d~-~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~-sly~-a~t~G~vlavt~~ 165 (354)
T KOG4649|consen 89 FVILETVKVRAQCDF-DGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDG-SLYA-AITAGAVLAVTKN 165 (354)
T ss_pred eeehhhhccceEEcC-CCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCc-eEEE-EeccceEEEEccC
Confidence 332211111223445 789999999999999999999999988776555344445555 43 3333 3334555444444
Q ss_pred CC
Q 046451 339 GC 340 (719)
Q Consensus 339 ~~ 340 (719)
..
T Consensus 166 ~~ 167 (354)
T KOG4649|consen 166 PY 167 (354)
T ss_pred CC
Confidence 43
No 362
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.58 E-value=0.018 Score=63.25 Aligned_cols=254 Identities=15% Similarity=0.160 Sum_probs=128.7
Q ss_pred cceEEEcCCCCeEEEee-ccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEE
Q 046451 10 SASVAFAPDAPYMAAGT-MAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVA 88 (719)
Q Consensus 10 V~~vafSpdg~~Latgs-~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~la 88 (719)
+..+++||||++||.+- ..| +....++++|+.++...... +. ......+.|..++. .++.
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G------~e~~~l~v~Dl~tg~~l~d~-----i~-~~~~~~~~W~~d~~-------~~~y 186 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGG------SEWYTLRVFDLETGKFLPDG-----IE-NPKFSSVSWSDDGK-------GFFY 186 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETT------SSEEEEEEEETTTTEEEEEE-----EE-EEESEEEEECTTSS-------EEEE
T ss_pred eeeeeECCCCCEEEEEecCCC------CceEEEEEEECCCCcCcCCc-----cc-ccccceEEEeCCCC-------EEEE
Confidence 34678999999999873 334 34456789998866322111 11 11223499999973 4555
Q ss_pred EEcCC----------CcEEEEcCCccccCCCCCCCCceeeeccccC--CEEEEEEeCCCCCEEEEEe-CC---CcEEEEc
Q 046451 89 GGLVD----------GSIDIWNPLSLISSGETGGNPLIAHLSRHKG--PVRGLEFNSFTPNLLASGA-DD---GEICIWD 152 (719)
Q Consensus 89 sgs~d----------g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~--~V~~l~fsp~~~~~lasgs-~d---g~I~iwd 152 (719)
+...+ ..|++|++.+... .....+..... ....+..+. ++++|+..+ .. ..|++.|
T Consensus 187 ~~~~~~~~~~~~~~~~~v~~~~~gt~~~-------~d~lvfe~~~~~~~~~~~~~s~-d~~~l~i~~~~~~~~s~v~~~d 258 (414)
T PF02897_consen 187 TRFDEDQRTSDSGYPRQVYRHKLGTPQS-------EDELVFEEPDEPFWFVSVSRSK-DGRYLFISSSSGTSESEVYLLD 258 (414)
T ss_dssp EECSTTTSS-CCGCCEEEEEEETTS-GG-------G-EEEEC-TTCTTSEEEEEE-T-TSSEEEEEEESSSSEEEEEEEE
T ss_pred EEeCcccccccCCCCcEEEEEECCCChH-------hCeeEEeecCCCcEEEEEEecC-cccEEEEEEEccccCCeEEEEe
Confidence 54333 2378888743221 21233333222 256788888 677766543 22 3477888
Q ss_pred CCCCC-CCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC---CCcEEEEECCCCce---eEEecCCCCC--ceeEE
Q 046451 153 LSAPA-EPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY---NGTTVVWDLKKQKP---VISFSESIKR--RCSVL 223 (719)
Q Consensus 153 l~~~~-~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~---dg~I~iwd~~~~~~---~~~~~~~~~~--~i~~l 223 (719)
+.... ....+..+.. ...+....+... . ..+++.... ++.|...++..... ...+. .+.. .+..+
T Consensus 259 ~~~~~~~~~~~~~l~~---~~~~~~~~v~~~-~-~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~-~~~~~~~l~~~ 332 (414)
T PF02897_consen 259 LDDGGSPDAKPKLLSP---REDGVEYYVDHH-G-DRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLI-PEDEDVSLEDV 332 (414)
T ss_dssp CCCTTTSS-SEEEEEE---SSSS-EEEEEEE-T-TEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE---SSSEEEEEE
T ss_pred ccccCCCcCCcEEEeC---CCCceEEEEEcc-C-CEEEEeeCCCCCCcEEEEecccccccccceeEEc-CCCCceeEEEE
Confidence 87641 0111110111 112233334443 3 345544433 46788888887652 21232 3444 45555
Q ss_pred EECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC-CCCCeeEEEeCCCCCCeEEEEeC---CCcEEEEECCCCeE
Q 046451 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG-HTKGVIAMSWCPNDSSYLLTCAK---DNRTICWDTVSGEI 299 (719)
Q Consensus 224 ~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~-h~~~V~~v~~sp~d~~~l~sgs~---Dg~I~iwd~~~~~~ 299 (719)
... +.++++....++ ...|+++|+..+ .....+.. -.+.|..+........++++.+. -++|..||+.+++.
T Consensus 333 ~~~--~~~Lvl~~~~~~-~~~l~v~~~~~~-~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~ 408 (414)
T PF02897_consen 333 SLF--KDYLVLSYRENG-SSRLRVYDLDDG-KESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGEL 408 (414)
T ss_dssp EEE--TTEEEEEEEETT-EEEEEEEETT-T-EEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCE
T ss_pred EEE--CCEEEEEEEECC-ccEEEEEECCCC-cEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCE
Confidence 554 335555555544 457999999722 22333322 23345666655533334444332 35788889988875
Q ss_pred E
Q 046451 300 V 300 (719)
Q Consensus 300 ~ 300 (719)
.
T Consensus 409 ~ 409 (414)
T PF02897_consen 409 T 409 (414)
T ss_dssp E
T ss_pred E
Confidence 3
No 363
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.51 E-value=0.067 Score=55.07 Aligned_cols=226 Identities=17% Similarity=0.228 Sum_probs=124.7
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
+.|+.|+.+| |.++++.. .. ...... +...|..+...+ +-+.|++-+ |+.|+++++...........
T Consensus 8 ~~L~vGt~~G-l~~~~~~~-----~~---~~~~i~--~~~~I~ql~vl~-~~~~llvLs-d~~l~~~~L~~l~~~~~~~~ 74 (275)
T PF00780_consen 8 DRLLVGTEDG-LYVYDLSD-----PS---KPTRIL--KLSSITQLSVLP-ELNLLLVLS-DGQLYVYDLDSLEPVSTSAP 74 (275)
T ss_pred CEEEEEECCC-EEEEEecC-----Cc---cceeEe--ecceEEEEEEec-ccCEEEEEc-CCccEEEEchhhcccccccc
Confidence 6888898888 88988721 11 122222 222399999988 556555554 49999999987654432100
Q ss_pred cc-------CCCCCCCCCeEEEE--ecCCCCcEEEEEeCCCcEEEEECCCC-----ceeEEecCCCCCceeEEEECCCCC
Q 046451 165 LR-------GNGSAAQGEISFVS--WNSKVQHILASTSYNGTTVVWDLKKQ-----KPVISFSESIKRRCSVLQWNPDVA 230 (719)
Q Consensus 165 l~-------~~~~~h~~~I~~l~--~sp~g~~~l~s~s~dg~I~iwd~~~~-----~~~~~~~~~~~~~i~~l~~sp~g~ 230 (719)
.. .........+..++ -...+...|+++. ..+|.+|..... +...++. ....+..++|..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~-kk~i~i~~~~~~~~~f~~~~ke~~--lp~~~~~i~~~~~-- 149 (275)
T PF00780_consen 75 LAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAV-KKKILIYEWNDPRNSFSKLLKEIS--LPDPPSSIAFLGN-- 149 (275)
T ss_pred ccccccccccccccccCCeeEEeeccccccceEEEEEE-CCEEEEEEEECCcccccceeEEEE--cCCCcEEEEEeCC--
Confidence 00 00111122344444 1223333444444 458888877653 4555655 6688999999943
Q ss_pred cEEEEEeCCCCCCcEEEEecCCCCCceEEe--eC----------CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 231 TQLVVASDEDSSPALRLWDMRNTMSPVKEF--VG----------HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 231 ~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~--~~----------h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
.++.+..++ ..+.|+.+.. ....+ .. ....+..+... ++.+|++. |..-.+.|. .|+
T Consensus 150 -~i~v~~~~~----f~~idl~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~e~Ll~~--~~~g~fv~~-~G~ 218 (275)
T PF00780_consen 150 -KICVGTSKG----FYLIDLNTGS-PSELLDPSDSSSSFKSRNSSSKPLGIFQLS--DNEFLLCY--DNIGVFVNK-NGE 218 (275)
T ss_pred -EEEEEeCCc----eEEEecCCCC-ceEEeCccCCcchhhhcccCCCceEEEEeC--CceEEEEe--cceEEEEcC-CCC
Confidence 577777664 8999998542 22111 11 11233344443 34566543 333334444 454
Q ss_pred EEE--EecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 299 IVS--ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 299 ~~~--~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
... .+.-.. ...++.+.. + +|++.+ ++.|.||++.+++++.
T Consensus 219 ~~r~~~i~W~~-~p~~~~~~~--p-yli~~~-~~~iEV~~~~~~~lvQ 261 (275)
T PF00780_consen 219 PSRKSTIQWSS-APQSVAYSS--P-YLIAFS-SNSIEVRSLETGELVQ 261 (275)
T ss_pred cCcccEEEcCC-chhEEEEEC--C-EEEEEC-CCEEEEEECcCCcEEE
Confidence 333 232222 355666643 2 444444 3569999999998866
No 364
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.51 E-value=0.094 Score=57.27 Aligned_cols=254 Identities=12% Similarity=0.130 Sum_probs=115.7
Q ss_pred eEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeee
Q 046451 40 NLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL 119 (719)
Q Consensus 40 ~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l 119 (719)
.|+||+.....- ..+ .... +.|.++.|+.+. .|++-..||.+++||+.....-..+ ..+...
T Consensus 62 ~I~iys~sG~ll-~~i----~w~~-~~iv~~~wt~~e---------~LvvV~~dG~v~vy~~~G~~~fsl~---~~i~~~ 123 (410)
T PF04841_consen 62 SIQIYSSSGKLL-SSI----PWDS-GRIVGMGWTDDE---------ELVVVQSDGTVRVYDLFGEFQFSLG---EEIEEE 123 (410)
T ss_pred EEEEECCCCCEe-EEE----EECC-CCEEEEEECCCC---------eEEEEEcCCEEEEEeCCCceeechh---hhcccc
Confidence 478887763321 111 1223 789999998864 5667778999999998321100000 111111
Q ss_pred ccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCC-CCCccCCccCCCC-CCCC-CeEE-EEecCCCCcEEEEEeCC
Q 046451 120 SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPA-EPSHFPPLRGNGS-AAQG-EISF-VSWNSKVQHILASTSYN 195 (719)
Q Consensus 120 ~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~-~~~~~~~l~~~~~-~h~~-~I~~-l~~sp~g~~~l~s~s~d 195 (719)
......+....+.. +| ++.-..++.|.+.+-.... ..+.+..+..... .+.. .... ..++.+. ...+....+
T Consensus 124 ~v~e~~i~~~~~~~-~G--ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~-~~~i~~~~g 199 (410)
T PF04841_consen 124 KVLECRIFAIWFYK-NG--IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDR-VVEILLANG 199 (410)
T ss_pred CcccccccccccCC-CC--EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCc-ceEEEEecC
Confidence 11222233333322 23 3333444555444322211 1111111111000 0000 1111 2233332 233444445
Q ss_pred CcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCC-CCCeeEEEeCC
Q 046451 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGH-TKGVIAMSWCP 274 (719)
Q Consensus 196 g~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h-~~~V~~v~~sp 274 (719)
+.+.+.+-...+. +. ..+.+..|++||+|+ +++.-..++ .+.+.+..- .+.+.++... ......+.|+-
T Consensus 200 ~~i~~i~~~~~~~---i~--~~~~i~~iavSpng~-~iAl~t~~g---~l~v~ssDf-~~~~~e~~~~~~~~p~~~~WCG 269 (410)
T PF04841_consen 200 ETIYIIDENSFKQ---ID--SDGPIIKIAVSPNGK-FIALFTDSG---NLWVVSSDF-SEKLCEFDTDSKSPPKQMAWCG 269 (410)
T ss_pred CEEEEEEcccccc---cc--CCCCeEEEEECCCCC-EEEEEECCC---CEEEEECcc-cceeEEeecCcCCCCcEEEEEC
Confidence 5555444332211 22 356899999999995 566666666 788887543 2344444433 33455666664
Q ss_pred CCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 275 NDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 275 ~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
.|..+..|+ +.+.-+.....+ +.|.-++ ..++..-.|| |+|..-+..+.+.
T Consensus 270 ----------~dav~l~~~----~~l~lvg~~~~~---~~~~~~~-~~~l~~E~DG-~riit~~~~~~l~ 320 (410)
T PF04841_consen 270 ----------NDAVVLSWE----DELLLVGPDGDS---ISFWYDG-PVILVSEIDG-VRIITSTSHEFLQ 320 (410)
T ss_pred ----------CCcEEEEeC----CEEEEECCCCCc---eEEeccC-ceEEeccCCc-eEEEeCCceEEEE
Confidence 333333441 112222122222 3444454 2444444455 7777666555544
No 365
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.49 E-value=0.005 Score=70.94 Aligned_cols=146 Identities=9% Similarity=0.059 Sum_probs=95.0
Q ss_pred CcEEEEE-eCCCcEEEEECCCCceeEEecCCCCCceeEEEECCC----CCcEEEEEeCCCCCCcEEEEecCCCCCceEEe
Q 046451 186 QHILAST-SYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPD----VATQLVVASDEDSSPALRLWDMRNTMSPVKEF 260 (719)
Q Consensus 186 ~~~l~s~-s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~----g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~ 260 (719)
.++|+.. .....|+-.|++.|+.+..+.......|..++-... .....++|-+++ .|..||.|-....+..-
T Consensus 493 ~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n---~lfriDpR~~~~k~v~~ 569 (794)
T PF08553_consen 493 RNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDN---SLFRIDPRLSGNKLVDS 569 (794)
T ss_pred cceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCC---ceEEeccCCCCCceeec
Confidence 3444443 456789999999999999998433333544432211 112355666665 79999998654322221
Q ss_pred eC----CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEe
Q 046451 261 VG----HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336 (719)
Q Consensus 261 ~~----h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd 336 (719)
.. ......|++-. ...+||+|+.+|.||+||--..+....|.+-...|.+|..+.||.++|+|| +..|.+++
T Consensus 570 ~~k~Y~~~~~Fs~~aTt--~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc--~tyLlLi~ 645 (794)
T PF08553_consen 570 QSKQYSSKNNFSCFATT--EDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC--KTYLLLID 645 (794)
T ss_pred cccccccCCCceEEEec--CCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee--cceEEEEE
Confidence 12 23345666655 456899999999999999533333344567678999999999996555555 56777777
Q ss_pred CC
Q 046451 337 IE 338 (719)
Q Consensus 337 ~~ 338 (719)
..
T Consensus 646 t~ 647 (794)
T PF08553_consen 646 TL 647 (794)
T ss_pred Ee
Confidence 64
No 366
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.49 E-value=0.053 Score=55.83 Aligned_cols=243 Identities=13% Similarity=0.116 Sum_probs=125.7
Q ss_pred CCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcE
Q 046451 17 PDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSI 96 (719)
Q Consensus 17 pdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I 96 (719)
..++.|+.|+.+| + .++++........ ..+...|..+...++- +.|++- .|+.+
T Consensus 5 ~~~~~L~vGt~~G-l----------~~~~~~~~~~~~~------i~~~~~I~ql~vl~~~--------~~llvL-sd~~l 58 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-L----------YVYDLSDPSKPTR------ILKLSSITQLSVLPEL--------NLLLVL-SDGQL 58 (275)
T ss_pred cCCCEEEEEECCC-E----------EEEEecCCcccee------EeecceEEEEEEeccc--------CEEEEE-cCCcc
Confidence 3578899998877 3 5666621111111 1123338888888875 344443 35999
Q ss_pred EEEcCCccccCCCCCCCC--c---eeeeccccCCEEEEE-EeCCCCCEEEEEeCCCcEEEEcCCCCCCC--CccCCccCC
Q 046451 97 DIWNPLSLISSGETGGNP--L---IAHLSRHKGPVRGLE-FNSFTPNLLASGADDGEICIWDLSAPAEP--SHFPPLRGN 168 (719)
Q Consensus 97 ~lwd~~~~~~~~~~~~~~--~---~~~l~~h~~~V~~l~-fsp~~~~~lasgs~dg~I~iwdl~~~~~~--~~~~~l~~~ 168 (719)
+++++............. . ..........+..++ -....+...+......+|.||........ ..+..+.
T Consensus 59 ~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-- 136 (275)
T PF00780_consen 59 YVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-- 136 (275)
T ss_pred EEEEchhhccccccccccccccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE--
Confidence 999986554321110000 0 000111222333333 11223333344444558999888764221 1211111
Q ss_pred CCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCC-----------CCceeEEEECCCCCcEEEEEe
Q 046451 169 GSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESI-----------KRRCSVLQWNPDVATQLVVAS 237 (719)
Q Consensus 169 ~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~-----------~~~i~~l~~sp~g~~~l~~~s 237 (719)
..+.+.+++|..+ .|+.|..+ ...+.|+.++.....+.... ...+..+....+ .+|+ +.
T Consensus 137 ---lp~~~~~i~~~~~---~i~v~~~~-~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--e~Ll-~~ 206 (275)
T PF00780_consen 137 ---LPDPPSSIAFLGN---KICVGTSK-GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSDN--EFLL-CY 206 (275)
T ss_pred ---cCCCcEEEEEeCC---EEEEEeCC-ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeCCc--eEEE-Ee
Confidence 2458899999843 56666655 47889999766544332111 122333344432 2333 33
Q ss_pred CCCCCCcEEEEecCCCCCce-EEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC
Q 046451 238 DEDSSPALRLWDMRNTMSPV-KEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT 307 (719)
Q Consensus 238 ~d~~~~~I~lwDl~~~~~~~-~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~ 307 (719)
++ .-.+.|.. +.... ..+. -.....++++.. .+|+..+. +.|.||++.+++.++++...+
T Consensus 207 ~~----~g~fv~~~-G~~~r~~~i~-W~~~p~~~~~~~---pyli~~~~-~~iEV~~~~~~~lvQ~i~~~~ 267 (275)
T PF00780_consen 207 DN----IGVFVNKN-GEPSRKSTIQ-WSSAPQSVAYSS---PYLIAFSS-NSIEVRSLETGELVQTIPLPN 267 (275)
T ss_pred cc----eEEEEcCC-CCcCcccEEE-cCCchhEEEEEC---CEEEEECC-CEEEEEECcCCcEEEEEECCC
Confidence 32 23444443 22111 1222 233556666643 46666555 559999999999999887543
No 367
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.46 E-value=0.0072 Score=66.07 Aligned_cols=181 Identities=16% Similarity=0.129 Sum_probs=96.0
Q ss_pred eccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcE
Q 046451 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198 (719)
Q Consensus 119 l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I 198 (719)
+....-....+.++| +++++++ +.||...||........ ..+.-..++|...+ .+++-..+++|
T Consensus 28 lg~~~~~p~~ls~np-ngr~v~V-~g~geY~iyt~~~~r~k------------~~G~g~~~vw~~~n--~yAv~~~~~~I 91 (443)
T PF04053_consen 28 LGSCEIYPQSLSHNP-NGRFVLV-CGDGEYEIYTALAWRNK------------AFGSGLSFVWSSRN--RYAVLESSSTI 91 (443)
T ss_dssp EEE-SS--SEEEE-T-TSSEEEE-EETTEEEEEETTTTEEE------------EEEE-SEEEE-TSS--EEEEE-TTS-E
T ss_pred CCCCCcCCeeEEECC-CCCEEEE-EcCCEEEEEEccCCccc------------ccCceeEEEEecCc--cEEEEECCCeE
Confidence 333444578999999 7888887 55678888873222111 12245578898854 57777778899
Q ss_pred EEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCC
Q 046451 199 VVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS 278 (719)
Q Consensus 199 ~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~ 278 (719)
.|+.--+.+....+. ....+..|-. | .+|...+.+ .|.+||..+. +.++.+... .|..+.|++ +++
T Consensus 92 ~I~kn~~~~~~k~i~--~~~~~~~If~---G-~LL~~~~~~----~i~~yDw~~~-~~i~~i~v~--~vk~V~Ws~-~g~ 157 (443)
T PF04053_consen 92 KIYKNFKNEVVKSIK--LPFSVEKIFG---G-NLLGVKSSD----FICFYDWETG-KLIRRIDVS--AVKYVIWSD-DGE 157 (443)
T ss_dssp EEEETTEE-TT-------SS-EEEEE----S-SSEEEEETT----EEEEE-TTT---EEEEESS---E-EEEEE-T-TSS
T ss_pred EEEEcCccccceEEc--CCcccceEEc---C-cEEEEECCC----CEEEEEhhHc-ceeeEEecC--CCcEEEEEC-CCC
Confidence 997433333333443 2223444433 5 466666665 5999999875 666666533 489999999 889
Q ss_pred eEEEEeCCCcEEEEECCCC-----------eEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEE
Q 046451 279 YLLTCAKDNRTICWDTVSG-----------EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGI 334 (719)
Q Consensus 279 ~l~sgs~Dg~I~iwd~~~~-----------~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~i 334 (719)
+++..+.+ .+.|++.+.. +.+..+..-...|.+..|..| -+|.|.. . +|+.
T Consensus 158 ~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~-~-~lkY 219 (443)
T PF04053_consen 158 LVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTS-N-HLKY 219 (443)
T ss_dssp EEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-T-T-EEEE
T ss_pred EEEEEeCC-eEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcC-C-eEEE
Confidence 88888755 6777765432 022222221456888899876 3444443 3 6666
No 368
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.40 E-value=0.0045 Score=65.99 Aligned_cols=142 Identities=11% Similarity=0.121 Sum_probs=95.8
Q ss_pred EEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCc------EEEEEeCCCCCCcEEEEecCCCCC-ceEEe
Q 046451 188 ILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVAT------QLVVASDEDSSPALRLWDMRNTMS-PVKEF 260 (719)
Q Consensus 188 ~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~------~l~~~s~d~~~~~I~lwDl~~~~~-~~~~~ 260 (719)
+|..+.....|+-.|++.|+.+.+.. ....|.-+.+.++++. .-++|-++. .|.-||.|-... .+...
T Consensus 348 il~~~~~~~~l~klDIE~GKIVeEWk--~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n---~vfriDpRv~~~~kl~~~ 422 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGKIVEEWK--FEDDINMVDITPDFKFAQLTSEQTLVGLSDN---SVFRIDPRVQGKNKLAVV 422 (644)
T ss_pred EeeCCCCcCcceeeecccceeeeEee--ccCCcceeeccCCcchhcccccccEEeecCC---ceEEecccccCcceeeee
Confidence 44556666789999999999999988 3444888888887532 233455555 799999985443 22223
Q ss_pred eCCC----CCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEe
Q 046451 261 VGHT----KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336 (719)
Q Consensus 261 ~~h~----~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd 336 (719)
.+|. ....|++-. ...+|++|+.+|.||+||--...-...|.+-...|..|..+.+|..+|+|| +..|.+-+
T Consensus 423 q~kqy~~k~nFsc~aTT--~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc--~tyLlLi~ 498 (644)
T KOG2395|consen 423 QSKQYSTKNNFSCFATT--ESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC--KTYLLLID 498 (644)
T ss_pred eccccccccccceeeec--CCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec--ccEEEEEE
Confidence 3332 223333332 567899999999999999833334455778888999999999995455544 45666665
Q ss_pred CC
Q 046451 337 IE 338 (719)
Q Consensus 337 ~~ 338 (719)
+.
T Consensus 499 t~ 500 (644)
T KOG2395|consen 499 TL 500 (644)
T ss_pred Ee
Confidence 54
No 369
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.40 E-value=0.1 Score=58.99 Aligned_cols=195 Identities=12% Similarity=0.053 Sum_probs=106.7
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecccc-CCE----------EEEEEeCCCCCEEEEEeCCCcEEEEcC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHK-GPV----------RGLEFNSFTPNLLASGADDGEICIWDL 153 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~-~~V----------~~l~fsp~~~~~lasgs~dg~I~iwdl 153 (719)
++|+.++.++.|+-+|. .++ +.+..+.... ..+ ..+++ .+..++.++.|+.|.-+|.
T Consensus 70 g~vyv~s~~g~v~AlDa------~TG---k~lW~~~~~~~~~~~~~~~~~~~~rg~av---~~~~v~v~t~dg~l~ALDa 137 (527)
T TIGR03075 70 GVMYVTTSYSRVYALDA------KTG---KELWKYDPKLPDDVIPVMCCDVVNRGVAL---YDGKVFFGTLDARLVALDA 137 (527)
T ss_pred CEEEEECCCCcEEEEEC------CCC---ceeeEecCCCCcccccccccccccccceE---ECCEEEEEcCCCEEEEEEC
Confidence 47777777888888887 455 5554433211 111 11223 2356777888999999999
Q ss_pred CCCCCCCccCCccCCCCCCCCCeEE-EEecCCCCcEEEEEe------CCCcEEEEECCCCceeEEecCCCCC--------
Q 046451 154 SAPAEPSHFPPLRGNGSAAQGEISF-VSWNSKVQHILASTS------YNGTTVVWDLKKQKPVISFSESIKR-------- 218 (719)
Q Consensus 154 ~~~~~~~~~~~l~~~~~~h~~~I~~-l~~sp~g~~~l~s~s------~dg~I~iwd~~~~~~~~~~~~~~~~-------- 218 (719)
.+++....+..... .....+.+ -.+. ++ .++++. .+|.|+.+|.++++.+.++......
T Consensus 138 ~TGk~~W~~~~~~~---~~~~~~tssP~v~-~g--~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~ 211 (527)
T TIGR03075 138 KTGKVVWSKKNGDY---KAGYTITAAPLVV-KG--KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKAD 211 (527)
T ss_pred CCCCEEeecccccc---cccccccCCcEEE-CC--EEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccc
Confidence 99887654321100 00001111 1111 22 344443 2689999999999988776532111
Q ss_pred ----------------------ce-eEEEECCCCCcEEEEEeCC-----CC--------CCcEEEEecCCCCCceEEeeC
Q 046451 219 ----------------------RC-SVLQWNPDVATQLVVASDE-----DS--------SPALRLWDMRNTMSPVKEFVG 262 (719)
Q Consensus 219 ----------------------~i-~~l~~sp~g~~~l~~~s~d-----~~--------~~~I~lwDl~~~~~~~~~~~~ 262 (719)
.+ ..++++++.. +++.+..+ +. ..+|.-.|+++++ ..-.++.
T Consensus 212 ~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~-lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~-~~W~~Q~ 289 (527)
T TIGR03075 212 KPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETN-LIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGK-IKWHYQT 289 (527)
T ss_pred cccccccccCCCCCCccccCCCCccCceeEcCCCC-eEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCC-EEEeeeC
Confidence 00 1235666553 34444322 10 1256667777653 2222322
Q ss_pred --CCCC-------eeEEEeCCCCCC---eEEEEeCCCcEEEEECCCCeEE
Q 046451 263 --HTKG-------VIAMSWCPNDSS---YLLTCAKDNRTICWDTVSGEIV 300 (719)
Q Consensus 263 --h~~~-------V~~v~~sp~d~~---~l~sgs~Dg~I~iwd~~~~~~~ 300 (719)
|... ..-+.+.. +++ .++.+.++|.++++|.++|+.+
T Consensus 290 ~~~D~wD~d~~~~p~l~d~~~-~G~~~~~v~~~~K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 290 TPHDEWDYDGVNEMILFDLKK-DGKPRKLLAHADRNGFFYVLDRTNGKLL 338 (527)
T ss_pred CCCCCccccCCCCcEEEEecc-CCcEEEEEEEeCCCceEEEEECCCCcee
Confidence 2211 11122222 444 7889999999999999999886
No 370
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.36 E-value=0.0058 Score=52.24 Aligned_cols=92 Identities=17% Similarity=0.176 Sum_probs=62.8
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
.-|++|+.|..|++|+-+ ..+..+. ..+.|.+|.-.. ...|+.+..+|+|-+|+-....
T Consensus 16 ~eLlvGs~D~~IRvf~~~-----------e~~~Ei~-e~~~v~~L~~~~--~~~F~Y~l~NGTVGvY~~~~Rl------- 74 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKGD-----------EIVAEIT-ETDKVTSLCSLG--GGRFAYALANGTVGVYDRSQRL------- 74 (111)
T ss_pred ceEEEecCCcEEEEEeCC-----------cEEEEEe-cccceEEEEEcC--CCEEEEEecCCEEEEEeCccee-------
Confidence 789999999999999853 4444554 345677777655 4789999999999999753321
Q ss_pred ccCCCCCCCCCeEEEEe---cCCCCcEEEEEeCCCcEEE
Q 046451 165 LRGNGSAAQGEISFVSW---NSKVQHILASTSYNGTTVV 200 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~---sp~g~~~l~s~s~dg~I~i 200 (719)
++.. .+..+.++.+ +.+|...|++|-.+|.|-+
T Consensus 75 WRiK---SK~~~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 75 WRIK---SKNQVTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred eeec---cCCCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 1111 1224555554 4455567999999998753
No 371
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.36 E-value=0.18 Score=50.24 Aligned_cols=243 Identities=18% Similarity=0.113 Sum_probs=130.3
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCc-EEEEcCCccccCCCCCCCCceeeeccccCC--EEEEEEeCCCCCEEEE
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGS-IDIWNPLSLISSGETGGNPLIAHLSRHKGP--VRGLEFNSFTPNLLAS 141 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~-I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~--V~~l~fsp~~~~~las 141 (719)
.+...|+|+|... .-++.+-.-|+ ..++|... . .....+...++. --.=.|++ |+.+|..
T Consensus 68 aR~Hgi~~~p~~~-------ravafARrPGtf~~vfD~~~------~---~~pv~~~s~~~RHfyGHGvfs~-dG~~LYA 130 (366)
T COG3490 68 ARGHGIAFHPALP-------RAVAFARRPGTFAMVFDPNG------A---QEPVTLVSQEGRHFYGHGVFSP-DGRLLYA 130 (366)
T ss_pred cccCCeecCCCCc-------ceEEEEecCCceEEEECCCC------C---cCcEEEecccCceeecccccCC-CCcEEEe
Confidence 3445788888754 56666666665 46788732 2 222222111110 11235888 7888876
Q ss_pred EeCC-----CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC-------CC-----------cE
Q 046451 142 GADD-----GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY-------NG-----------TT 198 (719)
Q Consensus 142 gs~d-----g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~-------dg-----------~I 198 (719)
.-+| |.|-|||.+..- ..+ +....|.-.-..+.|..||. +++.+.. -| .+
T Consensus 131 TEndfd~~rGViGvYd~r~~f--qrv----gE~~t~GiGpHev~lm~DGr-tlvvanGGIethpdfgR~~lNldsMePSl 203 (366)
T COG3490 131 TENDFDPNRGVIGVYDAREGF--QRV----GEFSTHGIGPHEVTLMADGR-TLVVANGGIETHPDFGRTELNLDSMEPSL 203 (366)
T ss_pred ecCCCCCCCceEEEEeccccc--cee----cccccCCcCcceeEEecCCc-EEEEeCCceecccccCccccchhhcCccE
Confidence 6443 789999988432 111 11223444556788999985 4444322 01 23
Q ss_pred EEEECCCCceeEEecC---CCCCceeEEEECCCCCcEEEEEeCCCCCC-cEEEEecCCCCCceEEee-------CCCCCe
Q 046451 199 VVWDLKKQKPVISFSE---SIKRRCSVLQWNPDVATQLVVASDEDSSP-ALRLWDMRNTMSPVKEFV-------GHTKGV 267 (719)
Q Consensus 199 ~iwd~~~~~~~~~~~~---~~~~~i~~l~~sp~g~~~l~~~s~d~~~~-~I~lwDl~~~~~~~~~~~-------~h~~~V 267 (719)
.+.|..+++.+.+... .+...|..++...|| ++++.+-..+... .--+.-.....+++..+. .....|
T Consensus 204 vlld~atG~liekh~Lp~~l~~lSiRHld~g~dg-tvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYi 282 (366)
T COG3490 204 VLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDG-TVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYI 282 (366)
T ss_pred EEEeccccchhhhccCchhhhhcceeeeeeCCCC-cEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhh
Confidence 3444444444433221 234567888888887 4555554443100 000111111122222221 123467
Q ss_pred eEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeC
Q 046451 268 IAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337 (719)
Q Consensus 268 ~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~ 337 (719)
-+|+.+..++-..+|+=..+...+||..+|..+..-.-- .+..+.-...| +.+ .+.+|+|.++.-
T Consensus 283 gsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l~--daaGva~~~~g--f~v-ssg~G~~~~~s~ 347 (366)
T COG3490 283 GSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAALP--DAAGVAAAKGG--FAV-SSGQGRIIFYSR 347 (366)
T ss_pred hheeecccCCeEEEecCCCCeEEEEEcCCCcEEeccccc--ccccceeccCc--eEE-ecCCceEEeccc
Confidence 788888745555566667778899999999987654221 23344444444 444 455899998843
No 372
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=97.34 E-value=0.38 Score=55.59 Aligned_cols=284 Identities=11% Similarity=0.046 Sum_probs=149.4
Q ss_pred EcCCCCeEEEeeccceeecccCCCceEEEEEee-ccCCccccee-ecccCCCCCceeeeecCCCCCCCCCccceEEEEcC
Q 046451 15 FAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLD-FQSEDRDLLL-VGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLV 92 (719)
Q Consensus 15 fSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~-~~~~~~~~~~-~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~ 92 (719)
...+|.+...|+.+|.+. ..-+. .++....+.+ +...+...-..|+..-++| +|++|+.
T Consensus 265 v~~~~~~yLl~d~~G~Lf----------~l~l~~~~e~~s~~~lkve~lge~siassi~~L~ng---------~lFvGS~ 325 (1096)
T KOG1897|consen 265 VDLQGSRYLLGDEDGMLF----------KLLLSHTGETVSGLDLKVEYLGETSIASSINYLDNG---------VLFVGSR 325 (1096)
T ss_pred ccCCccEEEEecCCCcEE----------EEEeecccccccceEEEEEecCCcchhhhhhcccCc---------eEEEecc
Confidence 345677777888888652 11122 2222111111 2234455667788888774 9999999
Q ss_pred CCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC---CCEEEEEe---CCCcEEEEcCCCCCCCCccCCcc
Q 046451 93 DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT---PNLLASGA---DDGEICIWDLSAPAEPSHFPPLR 166 (719)
Q Consensus 93 dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~---~~~lasgs---~dg~I~iwdl~~~~~~~~~~~l~ 166 (719)
-|.-.+..+.+... .+.-...+.++. .-++|.+++.-..+ ...|++|+ .||+++|..-.-+-...-...+.
T Consensus 326 ~gdSqLi~L~~e~d--~gsy~~ilet~~-NLgPI~Dm~Vvd~d~q~q~qivtCsGa~kdgSLRiiRngi~I~e~A~i~l~ 402 (1096)
T KOG1897|consen 326 FGDSQLIKLNTEPD--VGSYVVILETFV-NLGPIVDMCVVDLDRQGQGQIVTCSGAFKDGSLRIIRNGIGIDELASIDLP 402 (1096)
T ss_pred CCceeeEEccccCC--CCchhhhhhhcc-cccceeeEEEEeccccCCceEEEEeCCCCCCcEEEEecccccceeeEeecC
Confidence 88888888754332 121111222222 44688887775433 34566654 58999997533221111100122
Q ss_pred CCCCCCCCCeEEEE--ecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 167 GNGSAAQGEISFVS--WNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 167 ~~~~~h~~~I~~l~--~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
+ -..++.+. +++.-..+|+.+-.+ .-++..+... ...+...+.......+..+.-+...++-...+ .
T Consensus 403 G-----ikg~w~lk~~v~~~~d~ylvlsf~~-eTrvl~i~~e-~ee~~~~gf~~~~~Tif~S~i~g~~lvQvTs~----~ 471 (1096)
T KOG1897|consen 403 G-----IKGMWSLKSMVDENYDNYLVLSFIS-ETRVLNISEE-VEETEDPGFSTDEQTIFCSTINGNQLVQVTSN----S 471 (1096)
T ss_pred C-----ccceeEeeccccccCCcEEEEEecc-ceEEEEEccc-eEEeccccccccCceEEEEccCCceEEEEecc----c
Confidence 1 22566666 544433455554443 3455555433 22222113333444444444333345555555 4
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEe-cCCCCCeEEeEEcCC--CCC
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSEL-PAGTNWNFDIHWYPK--IPG 321 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l-~~h~~~v~~l~~spd--g~~ 321 (719)
|+++|-. ..+..+.... .++....+- +...++.++.++.+...++..+...... ......|.|+.++|- +++
T Consensus 472 iRl~ss~---~~~~~W~~p~-~~ti~~~~~-n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~~ 546 (1096)
T KOG1897|consen 472 IRLVSSA---GLRSEWRPPG-KITIGVVSA-NASQVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAPN 546 (1096)
T ss_pred EEEEcch---hhhhcccCCC-ceEEEEEee-cceEEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCCC
Confidence 8888864 1233333332 333333333 4556777777788888888766522211 123456899999975 444
Q ss_pred ---EEEEEeCCCcEEEEe
Q 046451 322 ---VISASSFDGKIGIYN 336 (719)
Q Consensus 322 ---~las~s~Dg~I~iwd 336 (719)
+++.|.++..+.+.-
T Consensus 547 ~s~~~aVG~Ws~~~~~l~ 564 (1096)
T KOG1897|consen 547 KSRLLAVGLWSDISMILT 564 (1096)
T ss_pred cceEEEEEeecceEEEEE
Confidence 899999887665543
No 373
>PRK10115 protease 2; Provisional
Probab=97.33 E-value=0.29 Score=57.20 Aligned_cols=250 Identities=11% Similarity=0.035 Sum_probs=118.1
Q ss_pred cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 10 SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 10 V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
+..+.|||||++||.+...+. +....|++.|+.++..... ..... . ..++|.+|+. .++++
T Consensus 129 l~~~~~Spdg~~la~~~d~~G-----~E~~~l~v~d~~tg~~l~~-----~i~~~-~-~~~~w~~D~~-------~~~y~ 189 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLS-----RRQYGIRFRNLETGNWYPE-----LLDNV-E-PSFVWANDSW-------TFYYV 189 (686)
T ss_pred EeEEEECCCCCEEEEEecCCC-----cEEEEEEEEECCCCCCCCc-----cccCc-c-eEEEEeeCCC-------EEEEE
Confidence 567899999999998744321 2345567777764431111 11111 1 4699999873 45555
Q ss_pred EcCC-----CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC---CCcEEEEcCCCCCC-CC
Q 046451 90 GLVD-----GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD---DGEICIWDLSAPAE-PS 160 (719)
Q Consensus 90 gs~d-----g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~---dg~I~iwdl~~~~~-~~ 160 (719)
...+ ..|+++++.+... +. .++ +........-..+...++++++..+. ++.+.+|+...... ..
T Consensus 190 ~~~~~~~~~~~v~~h~lgt~~~--~d---~lv--~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~ 262 (686)
T PRK10115 190 RKHPVTLLPYQVWRHTIGTPAS--QD---ELV--YEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPF 262 (686)
T ss_pred EecCCCCCCCEEEEEECCCChh--HC---eEE--EeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCce
Confidence 4432 3677778743211 11 222 22222223322233335665554433 45788888543211 11
Q ss_pred ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC---CCcEEEEECCC-CceeEEecCCCCCceeEEEECCCCCcEEEEE
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY---NGTTVVWDLKK-QKPVISFSESIKRRCSVLQWNPDVATQLVVA 236 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~---dg~I~iwd~~~-~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~ 236 (719)
.+ +.. ..+....+. +.. ..+++.... ...|...++.. ++....+.......+..+.+..+ .++++.
T Consensus 263 ~~--~~~----~~~~~~~~~-~~~-~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~--~l~~~~ 332 (686)
T PRK10115 263 VF--LPR----RKDHEYSLD-HYQ-HRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFTD--WLVVEE 332 (686)
T ss_pred EE--EEC----CCCCEEEEE-eCC-CEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEECC--EEEEEE
Confidence 11 111 011222222 222 234443332 22444455552 22222222112347888888733 566666
Q ss_pred eCCCCCCcEEEEecCCCCCceEEee-CCCCCeeEEEeC--CCCCCeEEEEe---CCCcEEEEECCCCe
Q 046451 237 SDEDSSPALRLWDMRNTMSPVKEFV-GHTKGVIAMSWC--PNDSSYLLTCA---KDNRTICWDTVSGE 298 (719)
Q Consensus 237 s~d~~~~~I~lwDl~~~~~~~~~~~-~h~~~V~~v~~s--p~d~~~l~sgs---~Dg~I~iwd~~~~~ 298 (719)
..++ ...|+++|+.. ..+..+. .....+..+.++ .+++.++++.+ .-+.+..||..+++
T Consensus 333 ~~~g-~~~l~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~ 397 (686)
T PRK10115 333 RQRG-LTSLRQINRKT--REVIGIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE 397 (686)
T ss_pred EeCC-EEEEEEEcCCC--CceEEecCCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence 6555 23456666542 2233333 222233333444 32234555444 33678888987765
No 374
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=97.30 E-value=0.0072 Score=67.52 Aligned_cols=108 Identities=15% Similarity=0.205 Sum_probs=76.5
Q ss_pred eeeecCCCCCCCCCccceEEEEc----CCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC
Q 046451 69 RLAWGKNGSGSEDFSLGLVAGGL----VDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 69 ~l~~sp~g~~~~~~~~~~lasgs----~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
-+.|+|.. -++++++ ..|+|.||- .+| +...... ..-.+++++|+| ..-.|+.|-.
T Consensus 20 i~SWHPse--------PlfAVA~fS~er~GSVtIfa-------dtG---EPqr~Vt-~P~hatSLCWHp-e~~vLa~gwe 79 (1416)
T KOG3617|consen 20 ISSWHPSE--------PLFAVASFSPERGGSVTIFA-------DTG---EPQRDVT-YPVHATSLCWHP-EEFVLAQGWE 79 (1416)
T ss_pred ccccCCCC--------ceeEEEEecCCCCceEEEEe-------cCC---CCCcccc-cceehhhhccCh-HHHHHhhccc
Confidence 45688876 4677665 358888885 223 2111111 112346799999 6677888888
Q ss_pred CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC
Q 046451 145 DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK 204 (719)
Q Consensus 145 dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~ 204 (719)
-|.+.+|...+.+.-. ....|...|..+.|+++| ..++++..-|.|.+|...
T Consensus 80 ~g~~~v~~~~~~e~ht-------v~~th~a~i~~l~wS~~G-~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 80 MGVSDVQKTNTTETHT-------VVETHPAPIQGLDWSHDG-TVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred cceeEEEecCCceeee-------eccCCCCCceeEEecCCC-CeEEEcCCCceeEEEEee
Confidence 8999999987655322 223578899999999998 599999999999999876
No 375
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.26 E-value=0.043 Score=54.85 Aligned_cols=182 Identities=16% Similarity=0.140 Sum_probs=114.8
Q ss_pred CEEEEEEeCCCCCEEEEEeCCC--cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEE
Q 046451 125 PVRGLEFNSFTPNLLASGADDG--EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWD 202 (719)
Q Consensus 125 ~V~~l~fsp~~~~~lasgs~dg--~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd 202 (719)
-..++.|.. ++.++-+.+.-| .|+.+|+.+++...... +.. .---..++...+ +++...-.++...+||
T Consensus 46 FTQGL~~~~-~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~-l~~-----~~FgEGit~~~d--~l~qLTWk~~~~f~yd 116 (264)
T PF05096_consen 46 FTQGLEFLD-DGTLYESTGLYGQSSLRKVDLETGKVLQSVP-LPP-----RYFGEGITILGD--KLYQLTWKEGTGFVYD 116 (264)
T ss_dssp EEEEEEEEE-TTEEEEEECSTTEEEEEEEETTTSSEEEEEE--TT-----T--EEEEEEETT--EEEEEESSSSEEEEEE
T ss_pred cCccEEecC-CCEEEEeCCCCCcEEEEEEECCCCcEEEEEE-CCc-----cccceeEEEECC--EEEEEEecCCeEEEEc
Confidence 345788865 667777777766 79999999987543321 111 112234444443 4666667789999999
Q ss_pred CCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCC-----CCCeeEEEeCCCCC
Q 046451 203 LKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGH-----TKGVIAMSWCPNDS 277 (719)
Q Consensus 203 ~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h-----~~~V~~v~~sp~d~ 277 (719)
..+.+.+.++. ....-..++ .|++.++++-+++ .|+++|..+. +..+.+.-. -..++.+.|- +|
T Consensus 117 ~~tl~~~~~~~--y~~EGWGLt--~dg~~Li~SDGS~----~L~~~dP~~f-~~~~~i~V~~~g~pv~~LNELE~i--~G 185 (264)
T PF05096_consen 117 PNTLKKIGTFP--YPGEGWGLT--SDGKRLIMSDGSS----RLYFLDPETF-KEVRTIQVTDNGRPVSNLNELEYI--NG 185 (264)
T ss_dssp TTTTEEEEEEE---SSS--EEE--ECSSCEEEE-SSS----EEEEE-TTT--SEEEEEE-EETTEE---EEEEEEE--TT
T ss_pred cccceEEEEEe--cCCcceEEE--cCCCEEEEECCcc----ceEEECCccc-ceEEEEEEEECCEECCCcEeEEEE--cC
Confidence 99999999987 445556666 4455666666665 6999998764 444444322 2356667776 56
Q ss_pred CeEEEEeCCCcEEEEECCCCeEEEEecC------------C---CCCeEEeEEcCCCCCEEEEE
Q 046451 278 SYLLTCAKDNRTICWDTVSGEIVSELPA------------G---TNWNFDIHWYPKIPGVISAS 326 (719)
Q Consensus 278 ~~l~sgs~Dg~I~iwd~~~~~~~~~l~~------------h---~~~v~~l~~spdg~~~las~ 326 (719)
.+.|-.=....|...|..+|+.+..+.. + .+-.+.|+|.++...+++||
T Consensus 186 ~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 186 KIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp EEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 6555555677888999999998877631 1 34578999999886777776
No 376
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.26 E-value=0.021 Score=60.35 Aligned_cols=186 Identities=15% Similarity=0.188 Sum_probs=103.5
Q ss_pred CCEEEEEeC----------CCcEEEEcCCCC-CCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC
Q 046451 136 PNLLASGAD----------DGEICIWDLSAP-AEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK 204 (719)
Q Consensus 136 ~~~lasgs~----------dg~I~iwdl~~~-~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~ 204 (719)
..+|++|+. .|.|.++++... .....+..+. .....+.|++++-. ++ + |+++. ++.|++|++.
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~--~~~~~g~V~ai~~~-~~-~-lv~~~-g~~l~v~~l~ 115 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIH--STEVKGPVTAICSF-NG-R-LVVAV-GNKLYVYDLD 115 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEE--EEEESS-EEEEEEE-TT-E-EEEEE-TTEEEEEEEE
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEE--EEeecCcceEhhhh-CC-E-EEEee-cCEEEEEEcc
Confidence 467777753 289999999884 1111111011 11235688888876 32 3 44333 4789999998
Q ss_pred CCc-eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEe--eCCCCCeeEEEeCCCCCCeEE
Q 046451 205 KQK-PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF--VGHTKGVIAMSWCPNDSSYLL 281 (719)
Q Consensus 205 ~~~-~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~--~~h~~~V~~v~~sp~d~~~l~ 281 (719)
..+ ....-.......+.++....+ ++++|...+ .|.++..+.....+..+ ......++++.|-. +++.++
T Consensus 116 ~~~~l~~~~~~~~~~~i~sl~~~~~---~I~vgD~~~---sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~-d~~~~i 188 (321)
T PF03178_consen 116 NSKTLLKKAFYDSPFYITSLSVFKN---YILVGDAMK---SVSLLRYDEENNKLILVARDYQPRWVTAAEFLV-DEDTII 188 (321)
T ss_dssp TTSSEEEEEEE-BSSSEEEEEEETT---EEEEEESSS---SEEEEEEETTTE-EEEEEEESS-BEEEEEEEE--SSSEEE
T ss_pred CcccchhhheecceEEEEEEecccc---EEEEEEccc---CEEEEEEEccCCEEEEEEecCCCccEEEEEEec-CCcEEE
Confidence 877 433333124446666666633 566776665 57777554322223322 22345788888886 446999
Q ss_pred EEeCCCcEEEEECCC-------Ce----EEEEecCCCCCeEEe---EEcC--CCCC-----EEEEEeCCCcEEEE
Q 046451 282 TCAKDNRTICWDTVS-------GE----IVSELPAGTNWNFDI---HWYP--KIPG-----VISASSFDGKIGIY 335 (719)
Q Consensus 282 sgs~Dg~I~iwd~~~-------~~----~~~~l~~h~~~v~~l---~~sp--dg~~-----~las~s~Dg~I~iw 335 (719)
.+..+|.|.++.... +. .+..+.-+ ..|+++ ++.+ .+.. .++.++.+|.|.+.
T Consensus 189 ~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg-~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 189 VGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLG-DIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp EEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-S-S-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred EEcCCCeEEEEEECCCCcccccccccceeEEEEECC-CccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 999999999997652 22 22333333 347776 5455 2222 37777789988843
No 377
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=97.25 E-value=0.26 Score=49.29 Aligned_cols=283 Identities=13% Similarity=0.118 Sum_probs=146.1
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.-.+.+..+.|+.+ +...+. .+.-++|+|+........ .+.....+--.++..+-
T Consensus 84 ~~~~l~~Dv~vse~--yvyvad----------~ssGL~IvDIS~P~sP~~---~~~lnt~gyaygv~vsG---------- 138 (370)
T COG5276 84 NARDLFADVRVSEE--YVYVAD----------WSSGLRIVDISTPDSPTL---IGFLNTDGYAYGVYVSG---------- 138 (370)
T ss_pred ehhhhhheeEeccc--EEEEEc----------CCCceEEEeccCCCCcce---eccccCCceEEEEEecC----------
Confidence 33445556666644 333332 234468999986654432 22233333344444443
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
+++..+..|.-+.+.|+.+ ........++.........++.+ +++...+..|+-+.|.|+.+......+
T Consensus 139 n~aYVadlddgfLivdvsd------pssP~lagrya~~~~d~~~v~IS---Gn~AYvA~~d~GL~ivDVSnp~sPvli-- 207 (370)
T COG5276 139 NYAYVADLDDGFLIVDVSD------PSSPQLAGRYALPGGDTHDVAIS---GNYAYVAWRDGGLTIVDVSNPHSPVLI-- 207 (370)
T ss_pred CEEEEeeccCcEEEEECCC------CCCceeeeeeccCCCCceeEEEe---cCeEEEEEeCCCeEEEEccCCCCCeEE--
Confidence 5777777677788888843 22224445555555555677774 578888889999999999887655332
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEE-EECCCCCcEEEEEeCCCCCC
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVL-QWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l-~~sp~g~~~l~~~s~d~~~~ 243 (719)
+.. .....+.++..+++- .+++ -.+.-+.+-|..+.+....+..-....+.++ .+.-.+++.++.-+..
T Consensus 208 --~~~-n~g~g~~sv~vsdnr--~y~v-vy~egvlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~---- 277 (370)
T COG5276 208 --GSY-NTGPGTYSVSVSDNR--AYLV-VYDEGVLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAK---- 277 (370)
T ss_pred --EEE-ecCCceEEEEecCCe--eEEE-EcccceEEEecCCCCCceEeeccccCCcccccceecccceeeeecccc----
Confidence 111 112267777777662 2333 3344577788877664444432223333333 1222233333333333
Q ss_pred cEEEEecCCCCCceEE--eeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCC
Q 046451 244 ALRLWDMRNTMSPVKE--FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPG 321 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~--~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~ 321 (719)
-+.+.|+.+...+... +......-..+..+ +.++..+..+ ...+-|...-+......+....+.+.+.+-+. +
T Consensus 278 gl~~idisnp~spfl~ss~~t~g~~a~gi~ay---~~y~yiadkn-~g~vV~~s~~s~m~~~~g~~ti~~s~~v~~~~-q 352 (370)
T COG5276 278 GLPIIDISNPPSPFLSSSLDTAGYQAAGIRAY---GNYNYIADKN-TGAVVDASPPSMMDKRPGRPTIGQSCDVSVDT-Q 352 (370)
T ss_pred CceeEeccCCCCCchhccccCCCccccceEEe---cCeeEeccCC-ceEEEeCCChhhcccccCcceEeeecceEEEe-e
Confidence 3777777665433211 11111122233332 2344444333 33444443322222222222233444455555 4
Q ss_pred EEEEEeCCCcEEEEeCC
Q 046451 322 VISASSFDGKIGIYNIE 338 (719)
Q Consensus 322 ~las~s~Dg~I~iwd~~ 338 (719)
++.+...++.+.||+..
T Consensus 353 ~~y~~d~~~gl~i~~~~ 369 (370)
T COG5276 353 IIYSTDYNGGLSIIEYL 369 (370)
T ss_pred EEEEeecCCCEEEEEec
Confidence 78888889999999864
No 378
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=97.24 E-value=0.015 Score=65.99 Aligned_cols=232 Identities=13% Similarity=0.129 Sum_probs=122.1
Q ss_pred ceEEEEcCC------CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC------CcEEEEc
Q 046451 85 GLVAGGLVD------GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD------GEICIWD 152 (719)
Q Consensus 85 ~~lasgs~d------g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d------g~I~iwd 152 (719)
.+++.|+.+ ..+..||..+.. +.....+.. ...-.++++. ++.+.++|+.| .++..||
T Consensus 286 ~l~~vGG~~~~~~~~~~ve~yd~~~~~-------w~~~a~m~~-~r~~~~~~~~--~~~lYv~GG~~~~~~~l~~ve~YD 355 (571)
T KOG4441|consen 286 KLVAVGGYNRQGQSLRSVECYDPKTNE-------WSSLAPMPS-PRCRVGVAVL--NGKLYVVGGYDSGSDRLSSVERYD 355 (571)
T ss_pred eEEEECCCCCCCcccceeEEecCCcCc-------EeecCCCCc-ccccccEEEE--CCEEEEEccccCCCcccceEEEec
Confidence 577777776 357788874311 122222222 2223445554 45788889888 3577889
Q ss_pred CCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC-----cEEEEECCCCceeEEecCCCCCceeEEEECC
Q 046451 153 LSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG-----TTVVWDLKKQKPVISFSESIKRRCSVLQWNP 227 (719)
Q Consensus 153 l~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg-----~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp 227 (719)
..+.+ +..+..+... ........+ + +.+.++|+.|| +|..||.++.+....-. ............
T Consensus 356 ~~~~~-W~~~a~M~~~----R~~~~v~~l--~-g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~--m~~~r~~~gv~~ 425 (571)
T KOG4441|consen 356 PRTNQ-WTPVAPMNTK----RSDFGVAVL--D-GKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAP--MLTRRSGHGVAV 425 (571)
T ss_pred CCCCc-eeccCCccCc----cccceeEEE--C-CEEEEEeccccccccccEEEecCCCCcccccCC--CCcceeeeEEEE
Confidence 88776 3333333321 111212222 2 36888899886 47778887655332221 111222222222
Q ss_pred CCCcEEEEEeCCCCC---CcEEEEecCCCC-CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCc-----EEEEECCCCe
Q 046451 228 DVATQLVVASDEDSS---PALRLWDMRNTM-SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR-----TICWDTVSGE 298 (719)
Q Consensus 228 ~g~~~l~~~s~d~~~---~~I~lwDl~~~~-~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~-----I~iwd~~~~~ 298 (719)
-+..++++|+.++.. .++..||..+.. ..+..+..-..... ++.- ++.+++.||.|+. |..||..+.+
T Consensus 426 ~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g-~a~~--~~~iYvvGG~~~~~~~~~VE~ydp~~~~ 502 (571)
T KOG4441|consen 426 LGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFG-VAVL--NGKIYVVGGFDGTSALSSVERYDPETNQ 502 (571)
T ss_pred ECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccce-EEEE--CCEEEEECCccCCCccceEEEEcCCCCc
Confidence 223688888877654 578899987642 11111111111212 3322 5688888887763 7778887654
Q ss_pred EEEE--ecCCCCCeEEeEEcCCCCCEEEEEeCCC-----cEEEEeCCCCcc
Q 046451 299 IVSE--LPAGTNWNFDIHWYPKIPGVISASSFDG-----KIGIYNIEGCSR 342 (719)
Q Consensus 299 ~~~~--l~~h~~~v~~l~~spdg~~~las~s~Dg-----~I~iwd~~~~~~ 342 (719)
-... +......+..+.+ +..+.+.|+.|| +|..||-.+.+.
T Consensus 503 W~~v~~m~~~rs~~g~~~~---~~~ly~vGG~~~~~~l~~ve~ydp~~d~W 550 (571)
T KOG4441|consen 503 WTMVAPMTSPRSAVGVVVL---GGKLYAVGGFDGNNNLNTVECYDPETDTW 550 (571)
T ss_pred eeEcccCccccccccEEEE---CCEEEEEecccCccccceeEEcCCCCCce
Confidence 3322 2222222222222 236888888876 456666555444
No 379
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.22 E-value=0.097 Score=54.45 Aligned_cols=244 Identities=14% Similarity=0.068 Sum_probs=133.6
Q ss_pred EEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce
Q 046451 129 LEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP 208 (719)
Q Consensus 129 l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~ 208 (719)
-.|.+..+.++.+--..+.|.-||..+++.... . +.+.+.++.....+. .|+++.. -+++++.+++..
T Consensus 30 P~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~~----~-----~p~~~~~~~~~d~~g-~Lv~~~~--g~~~~~~~~~~~ 97 (307)
T COG3386 30 PVWDPDRGALLWVDILGGRIHRLDPETGKKRVF----P-----SPGGFSSGALIDAGG-RLIACEH--GVRLLDPDTGGK 97 (307)
T ss_pred ccCcCCCCEEEEEeCCCCeEEEecCCcCceEEE----E-----CCCCcccceeecCCC-eEEEEcc--ccEEEeccCCce
Confidence 346664444666666778888888875543211 1 122344444444433 4544433 366777766555
Q ss_pred eEEecC----CCCCceeEEEECCCCCcEEEEEeC------C--CCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCC
Q 046451 209 VISFSE----SIKRRCSVLQWNPDVATQLVVASD------E--DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPND 276 (719)
Q Consensus 209 ~~~~~~----~~~~~i~~l~~sp~g~~~l~~~s~------d--~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d 276 (719)
+..+.. ......+.+.+.++|. +.+.... . ...+.|+.+|. ....++.+..+-..-+.|+||| |
T Consensus 98 ~t~~~~~~~~~~~~r~ND~~v~pdG~-~wfgt~~~~~~~~~~~~~~G~lyr~~p--~g~~~~l~~~~~~~~NGla~Sp-D 173 (307)
T COG3386 98 ITLLAEPEDGLPLNRPNDGVVDPDGR-IWFGDMGYFDLGKSEERPTGSLYRVDP--DGGVVRLLDDDLTIPNGLAFSP-D 173 (307)
T ss_pred eEEeccccCCCCcCCCCceeEcCCCC-EEEeCCCccccCccccCCcceEEEEcC--CCCEEEeecCcEEecCceEECC-C
Confidence 333221 2235667889999985 3333332 1 12334555553 2344555555556668899999 7
Q ss_pred CCeEEEEe-CCCcEEEEECCC--C----e-EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCC-cEEEEeCCCCcccccCC
Q 046451 277 SSYLLTCA-KDNRTICWDTVS--G----E-IVSELPAGTNWNFDIHWYPKIPGVISASSFDG-KIGIYNIEGCSRYGVGD 347 (719)
Q Consensus 277 ~~~l~sgs-~Dg~I~iwd~~~--~----~-~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg-~I~iwd~~~~~~~~~~~ 347 (719)
++.|+.+. ..+.|.-|++.. + + ....+..+.+..-.++...+| ++.+++..+| .|.+|+-+ +++....
T Consensus 174 g~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG-~lw~~a~~~g~~v~~~~pd-G~l~~~i- 250 (307)
T COG3386 174 GKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADG-NLWVAAVWGGGRVVRFNPD-GKLLGEI- 250 (307)
T ss_pred CCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCC-CEEEecccCCceEEEECCC-CcEEEEE-
Confidence 76665554 558888887752 1 1 122233344556678888888 5654555454 99999999 6665522
Q ss_pred CCCCCCCccCcceecCCCceeeee-CCcEEEEccCCCCCc--cccccccccceeecc
Q 046451 348 SNFSAAPLRAPKWYKRPAGASFGF-GGKLVSFHPKSSAGH--TSENSQHAPVHGVDQ 401 (719)
Q Consensus 348 ~~~~~~~~~~p~w~~~~~~~s~s~-~Gklv~~~~~~~~~~--~~~~~~~~~v~~v~~ 401 (719)
..|. ..+..++|+- +++.+.+......+. +....|.+.+..+.+
T Consensus 251 --------~lP~--~~~t~~~FgG~~~~~L~iTs~~~~~~~~~~~~~~~G~lf~~~~ 297 (307)
T COG3386 251 --------KLPV--KRPTNPAFGGPDLNTLYITSARSGMSRMLTADPLGGGLFSLRL 297 (307)
T ss_pred --------ECCC--CCCccceEeCCCcCEEEEEecCCCCCccccccccCceEEEEec
Confidence 2332 1234455654 345555554444331 223455555665554
No 380
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.19 E-value=0.074 Score=51.30 Aligned_cols=220 Identities=10% Similarity=0.084 Sum_probs=119.1
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC-C-CEEEEEeCCCcEEEEcCCCC--CCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT-P-NLLASGADDGEICIWDLSAP--AEPS 160 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~-~-~~lasgs~dg~I~iwdl~~~--~~~~ 160 (719)
.++.+--..|.|.-||++... ....++.+. .+.++.|--.+ . .+.+.++..-.|.-||.... ...+
T Consensus 28 sLl~VDi~ag~v~r~D~~qn~--------v~ra~ie~p--~~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~ 97 (310)
T KOG4499|consen 28 SLLYVDIEAGEVHRYDIEQNK--------VYRAKIEGP--PSAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYR 97 (310)
T ss_pred eEEEEEeccCceehhhhhhhh--------eEEEEEecC--cceeEEEEecCCCceEEEeecceEEEEEcccccceeeeee
Confidence 466666677888889984311 111222221 13333332111 1 23444444444555774322 2222
Q ss_pred ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC----------CCcEEEEECCCCceeEEecCCCCCceeEEEECCCCC
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY----------NGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVA 230 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~----------dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~ 230 (719)
++..+.. ...+...++-..+|+|+ + ..|.. .|.++.|-.. ++....+. .-..-+.++|+.+.+
T Consensus 98 t~~ev~~--d~kknR~NDgkvdP~Gr-y-y~GtMad~~~~le~~~g~Ly~~~~~-h~v~~i~~--~v~IsNgl~Wd~d~K 170 (310)
T KOG4499|consen 98 TLFEVQP--DRKKNRLNDGKVDPDGR-Y-YGGTMADFGDDLEPIGGELYSWLAG-HQVELIWN--CVGISNGLAWDSDAK 170 (310)
T ss_pred eccccCc--hHHhcccccCccCCCCc-e-eeeeeccccccccccccEEEEeccC-CCceeeeh--hccCCccccccccCc
Confidence 2211111 11233566667788874 4 33332 2445555433 22222222 333446789998887
Q ss_pred cEEEEEeCCCCCCcEEEEe--cCCCC----CceEEeeC----CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEE
Q 046451 231 TQLVVASDEDSSPALRLWD--MRNTM----SPVKEFVG----HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV 300 (719)
Q Consensus 231 ~~l~~~s~d~~~~~I~lwD--l~~~~----~~~~~~~~----h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~ 300 (719)
.++++-+.+- .|.-|| +.++. +.+..++. ..-.--.++..- +|++.+++-..++|..+|..+|+.+
T Consensus 171 ~fY~iDsln~---~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~-eG~L~Va~~ng~~V~~~dp~tGK~L 246 (310)
T KOG4499|consen 171 KFYYIDSLNY---EVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDT-EGNLYVATFNGGTVQKVDPTTGKIL 246 (310)
T ss_pred EEEEEccCce---EEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEcc-CCcEEEEEecCcEEEEECCCCCcEE
Confidence 7777766665 777787 43321 12222221 011112344454 7788888888899999999999999
Q ss_pred EEecCCCCCeEEeEEcCCCCCEEEE
Q 046451 301 SELPAGTNWNFDIHWYPKIPGVISA 325 (719)
Q Consensus 301 ~~l~~h~~~v~~l~~spdg~~~las 325 (719)
.+++-....|++++|--.+-.++.+
T Consensus 247 ~eiklPt~qitsccFgGkn~d~~yv 271 (310)
T KOG4499|consen 247 LEIKLPTPQITSCCFGGKNLDILYV 271 (310)
T ss_pred EEEEcCCCceEEEEecCCCccEEEE
Confidence 9999888999999998653234433
No 381
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=97.19 E-value=0.3 Score=52.89 Aligned_cols=285 Identities=13% Similarity=0.134 Sum_probs=146.7
Q ss_pred CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEE
Q 046451 20 PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIW 99 (719)
Q Consensus 20 ~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lw 99 (719)
..|++|+.+|.+ +||+-........ .++-+...+..|..|....-..+. ....||+ -.-..+.||
T Consensus 38 d~IivGS~~G~L----------rIy~P~~~~~~~~-~lllE~~l~~PILqv~~G~F~s~~---~~~~LaV-LhP~kl~vY 102 (418)
T PF14727_consen 38 DKIIVGSYSGIL----------RIYDPSGNEFQPE-DLLLETQLKDPILQVECGKFVSGS---EDLQLAV-LHPRKLSVY 102 (418)
T ss_pred cEEEEeccccEE----------EEEccCCCCCCCc-cEEEEEecCCcEEEEEeccccCCC---CcceEEE-ecCCEEEEE
Confidence 578888877766 7787754432222 334445667888888765431111 1134444 567788888
Q ss_pred cCCccccCCCCCCCCceeeeccccC--CEEEEEEeCCC----CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCC
Q 046451 100 NPLSLISSGETGGNPLIAHLSRHKG--PVRGLEFNSFT----PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQ 173 (719)
Q Consensus 100 d~~~~~~~~~~~~~~~~~~l~~h~~--~V~~l~fsp~~----~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~ 173 (719)
.+.......+.+..-.+..+..|.- ....+++-+++ .++|++-+.||.+.+|+-+.......+ .. .-..
T Consensus 103 ~v~~~~g~~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~l---p~--~llP 177 (418)
T PF14727_consen 103 SVSLVDGTVEHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFL---PD--FLLP 177 (418)
T ss_pred EEEecCCCcccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEc---CC--CCCC
Confidence 8743221111111122333333432 23334433332 468999999999999997654322221 11 1112
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEEECCC--------------------Cc---eeEEecCCCCCceeEE---EECC
Q 046451 174 GEISFVSWNSKVQHILASTSYNGTTVVWDLKK--------------------QK---PVISFSESIKRRCSVL---QWNP 227 (719)
Q Consensus 174 ~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~--------------------~~---~~~~~~~~~~~~i~~l---~~sp 227 (719)
..+.|.+.. ..|++++.+..+..|.... ++ ...++. -...+..| .++.
T Consensus 178 ---gPl~Y~~~t-Dsfvt~sss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~n--lGE~~l~i~v~~~~~ 251 (418)
T PF14727_consen 178 ---GPLCYCPRT-DSFVTASSSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFN--LGEQALDIQVVRFSS 251 (418)
T ss_pred ---cCeEEeecC-CEEEEecCceeEEEecHHHhhhccccccccccccccccccccccceeEEE--CCceeEEEEEEEcCC
Confidence 245666654 4788888888888876521 01 112222 23333333 3333
Q ss_pred CCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEE-------eCCCCCCeEEEEeCCCcEEEEECCCCeEE
Q 046451 228 DVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMS-------WCPNDSSYLLTCAKDNRTICWDTVSGEIV 300 (719)
Q Consensus 228 ~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~-------~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~ 300 (719)
.. ..+++-+.. ++.+.+.. + . ++........-.+++ ..++.+..++.++.++.+.||.= .+++
T Consensus 252 ~~-~~IvvLger----~Lf~l~~~-G-~-l~~~krLd~~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~d--~~L~ 321 (418)
T PF14727_consen 252 SE-SDIVVLGER----SLFCLKDN-G-S-LRFQKRLDYNPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYED--TTLV 321 (418)
T ss_pred CC-ceEEEEecc----eEEEEcCC-C-e-EEEEEecCCceeeEEEEEeecccCCCCceEEEEEecCCeEEEEeC--CeEE
Confidence 32 234444443 46666653 2 2 222222222222222 11211235888999999999953 3444
Q ss_pred EEecCCCCCeEEeEEc--CCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 301 SELPAGTNWNFDIHWY--PKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 301 ~~l~~h~~~v~~l~~s--pdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
..-+.....| ++... .+-+.+|++-+.+|.|.+-=+.+.-
T Consensus 322 WsA~l~~~PV-al~v~~~~~~~G~IV~Ls~~G~L~v~YLGTdP 363 (418)
T PF14727_consen 322 WSAQLPHVPV-ALSVANFNGLKGLIVSLSDEGQLSVSYLGTDP 363 (418)
T ss_pred EecCCCCCCE-EEEecccCCCCceEEEEcCCCcEEEEEeCCCC
Confidence 4443322322 33222 2224699999999999998777653
No 382
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.14 E-value=0.0016 Score=70.68 Aligned_cols=77 Identities=14% Similarity=0.239 Sum_probs=69.7
Q ss_pred CCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeE-EeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 265 KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNF-DIHWYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 265 ~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~-~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
..|..+.|+| .-.+||++..+|.|.+..++ .+.+.++..+...++ +++|.+|| ++||.|-.||+|++.|++++..+
T Consensus 21 ~~i~~~ewnP-~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DG-kllaVg~kdG~I~L~Dve~~~~l 97 (665)
T KOG4640|consen 21 INIKRIEWNP-KMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDG-KLLAVGFKDGTIRLHDVEKGGRL 97 (665)
T ss_pred cceEEEEEcC-ccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCC-CEEEEEecCCeEEEEEccCCCce
Confidence 4678899999 88999999999999999997 888889987777777 99999999 89999999999999999998876
Q ss_pred c
Q 046451 344 G 344 (719)
Q Consensus 344 ~ 344 (719)
.
T Consensus 98 ~ 98 (665)
T KOG4640|consen 98 V 98 (665)
T ss_pred e
Confidence 5
No 383
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.12 E-value=0.013 Score=62.04 Aligned_cols=191 Identities=9% Similarity=0.103 Sum_probs=107.7
Q ss_pred CCeEEEeeccceeecccCCCceEEEEEeecc-CCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEE
Q 046451 19 APYMAAGTMAGAVDLSFSSSANLEIFKLDFQ-SEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSID 97 (719)
Q Consensus 19 g~~Latgs~dG~v~v~~s~~~~i~iwd~~~~-~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~ 97 (719)
..+|++|+.--.-.-.....+.+.++++... .....+.++......+.|++|+-.. +.|+.+. ++.|.
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~~----------~~lv~~~-g~~l~ 110 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSFN----------GRLVVAV-GNKLY 110 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEET----------TEEEEEE-TTEEE
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhhC----------CEEEEee-cCEEE
Confidence 4688888652110000011277899999863 3345666677777889999998763 2444443 57899
Q ss_pred EEcCCccccCCCCCCCCceeeecc--ccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC-CCccCCccCCCCCCCC
Q 046451 98 IWNPLSLISSGETGGNPLIAHLSR--HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE-PSHFPPLRGNGSAAQG 174 (719)
Q Consensus 98 lwd~~~~~~~~~~~~~~~~~~l~~--h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~-~~~~~~l~~~~~~h~~ 174 (719)
+|++.. . ..+..... ....+.++... +++|+.|+....|.++..+.... ... +.. .....
T Consensus 111 v~~l~~------~---~~l~~~~~~~~~~~i~sl~~~---~~~I~vgD~~~sv~~~~~~~~~~~l~~---va~--d~~~~ 173 (321)
T PF03178_consen 111 VYDLDN------S---KTLLKKAFYDSPFYITSLSVF---KNYILVGDAMKSVSLLRYDEENNKLIL---VAR--DYQPR 173 (321)
T ss_dssp EEEEET------T---SSEEEEEEE-BSSSEEEEEEE---TTEEEEEESSSSEEEEEEETTTE-EEE---EEE--ESS-B
T ss_pred EEEccC------c---ccchhhheecceEEEEEEecc---ccEEEEEEcccCEEEEEEEccCCEEEE---EEe--cCCCc
Confidence 999842 2 21222221 22366666664 46999999988899886554222 111 111 11234
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEEECCC-------Cc----eeEEecCCCCCceeEE---EECC--CCCc-----EE
Q 046451 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKK-------QK----PVISFSESIKRRCSVL---QWNP--DVAT-----QL 233 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~-------~~----~~~~~~~~~~~~i~~l---~~sp--~g~~-----~l 233 (719)
.++++.|-.++ ..++++..+|.+.++.... +. .+..+ .....|+++ ++.+ .+.. .+
T Consensus 174 ~v~~~~~l~d~-~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f--~lg~~v~~~~~~~l~~~~~~~~~~~~~~i 250 (321)
T PF03178_consen 174 WVTAAEFLVDE-DTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSF--HLGDIVNSFRRGSLIPRSGSSESPNRPQI 250 (321)
T ss_dssp EEEEEEEE-SS-SEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEE--E-SS-EEEEEE--SS--SSSS-TTEEEEE
T ss_pred cEEEEEEecCC-cEEEEEcCCCeEEEEEECCCCcccccccccceeEEEE--ECCCccceEEEEEeeecCCCCcccccceE
Confidence 68888888665 4899999999999998763 11 12233 356677777 5555 2222 37
Q ss_pred EEEeCCC
Q 046451 234 VVASDED 240 (719)
Q Consensus 234 ~~~s~d~ 240 (719)
+.++.+|
T Consensus 251 ~~~T~~G 257 (321)
T PF03178_consen 251 LYGTVDG 257 (321)
T ss_dssp EEEETTS
T ss_pred EEEecCC
Confidence 7777777
No 384
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=97.09 E-value=0.23 Score=52.98 Aligned_cols=228 Identities=10% Similarity=0.062 Sum_probs=100.9
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc---cc----CCEEEEEEeCCCCCEEEEEeC------CCcEEEE
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR---HK----GPVRGLEFNSFTPNLLASGAD------DGEICIW 151 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~---h~----~~V~~l~fsp~~~~~lasgs~------dg~I~iw 151 (719)
.+++-|-.++.|+|+|+.+.. ...+..+.+.. +. ..-..+...+ ++++++++-. .|-+.++
T Consensus 89 ~Li~PgL~SsrIyviD~~~dP-----r~P~l~KvIe~~ev~~k~g~s~PHT~Hclp-~G~imIS~lGd~~G~g~Ggf~ll 162 (461)
T PF05694_consen 89 YLILPGLRSSRIYVIDTKTDP-----RKPRLHKVIEPEEVFEKTGLSRPHTVHCLP-DGRIMISALGDADGNGPGGFVLL 162 (461)
T ss_dssp EEEEEBTTT--EEEEE--S-T-----TS-EEEEEE-HHHHHHHH-EEEEEEEEE-S-S--EEEEEEEETTS-S--EEEEE
T ss_pred cEEeeeeccCcEEEEECCCCC-----CCCceEeeeCHHHHHhhcCCCCCceeeecC-CccEEEEeccCCCCCCCCcEEEE
Confidence 455556688999999995321 11133333332 11 1122233345 6778877532 2567788
Q ss_pred cCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC--------------------CCcEEEEECCCCceeEE
Q 046451 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY--------------------NGTTVVWDLKKQKPVIS 211 (719)
Q Consensus 152 dl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~--------------------dg~I~iwd~~~~~~~~~ 211 (719)
|-++.+...... . .......-.++.|.+.. +++++... ..++.+||+.+.+.+.+
T Consensus 163 D~~tf~v~g~We---~-~~~~~~~gYDfw~qpr~-nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~ 237 (461)
T PF05694_consen 163 DGETFEVKGRWE---K-DRGPQPFGYDFWYQPRH-NVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQT 237 (461)
T ss_dssp -TTT--EEEE-----S-B-TT------EEEETTT-TEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEE
T ss_pred cCccccccceec---c-CCCCCCCCCCeEEcCCC-CEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeE
Confidence 877655443321 1 01122345677777764 57776542 35899999999999999
Q ss_pred ecCCCCC-ceeEEEECC--CCCcEEEEEeCCCCCCcEEEEec-CCCC---CceEEeeC-----C------------CCCe
Q 046451 212 FSESIKR-RCSVLQWNP--DVATQLVVASDEDSSPALRLWDM-RNTM---SPVKEFVG-----H------------TKGV 267 (719)
Q Consensus 212 ~~~~~~~-~i~~l~~sp--~g~~~l~~~s~d~~~~~I~lwDl-~~~~---~~~~~~~~-----h------------~~~V 267 (719)
+..+..+ ....|.|.. +..+-|+.+.-.. +|.+|-- +.+. +.+..+.. - ..-|
T Consensus 238 idLg~~g~~pLEvRflH~P~~~~gFvg~aLss---~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~Li 314 (461)
T PF05694_consen 238 IDLGEEGQMPLEVRFLHDPDANYGFVGCALSS---SIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLI 314 (461)
T ss_dssp EES-TTEEEEEEEEE-SSTT--EEEEEEE--E---EEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE----
T ss_pred EecCCCCCceEEEEecCCCCccceEEEEeccc---eEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCce
Confidence 8854333 355666654 4444455555444 5555543 2221 11112211 1 2347
Q ss_pred eEEEeCCCCCCeEEEEe-CCCcEEEEECCCC---eEEEEecCC----------------CCCeEEeEEcCCCCCEEEEEe
Q 046451 268 IAMSWCPNDSSYLLTCA-KDNRTICWDTVSG---EIVSELPAG----------------TNWNFDIHWYPKIPGVISASS 327 (719)
Q Consensus 268 ~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~~~---~~~~~l~~h----------------~~~v~~l~~spdg~~~las~s 327 (719)
++|..|- |.++|+.++ .+|.|+.||+..- +++.++.-. .+...-|..|-||+++.+|.|
T Consensus 315 tDI~iSl-DDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTnS 393 (461)
T PF05694_consen 315 TDILISL-DDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTNS 393 (461)
T ss_dssp --EEE-T-TS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE--
T ss_pred EeEEEcc-CCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEee
Confidence 8999999 666666555 6899999999753 334332211 112345778888866666655
No 385
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.03 E-value=0.1 Score=52.29 Aligned_cols=172 Identities=15% Similarity=0.229 Sum_probs=108.8
Q ss_pred eccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcE
Q 046451 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198 (719)
Q Consensus 119 l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I 198 (719)
+.+-...|.++.|++ +.+.|++..+...-.||=..+++.++.++ +.+ -.....|.|..+| .++++--.++.+
T Consensus 81 i~g~~~nvS~LTynp-~~rtLFav~n~p~~iVElt~~GdlirtiP-L~g-----~~DpE~Ieyig~n-~fvi~dER~~~l 152 (316)
T COG3204 81 ILGETANVSSLTYNP-DTRTLFAVTNKPAAIVELTKEGDLIRTIP-LTG-----FSDPETIEYIGGN-QFVIVDERDRAL 152 (316)
T ss_pred cccccccccceeeCC-CcceEEEecCCCceEEEEecCCceEEEec-ccc-----cCChhHeEEecCC-EEEEEehhcceE
Confidence 344555699999999 67777777777777777666677666643 333 1244567777775 466666668888
Q ss_pred EEEECCCCceeEEec-------C--CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCce--EEeeCC----
Q 046451 199 VVWDLKKQKPVISFS-------E--SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPV--KEFVGH---- 263 (719)
Q Consensus 199 ~iwd~~~~~~~~~~~-------~--~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~--~~~~~h---- 263 (719)
+++.+.....+..+. . ..+.....++|++..+. |+.+-..+ -+.||........+ .....+
T Consensus 153 ~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~-l~~aKEr~---P~~I~~~~~~~~~l~~~~~~~~~~~~ 228 (316)
T COG3204 153 YLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHR-LFVAKERN---PIGIFEVTQSPSSLSVHASLDPTADR 228 (316)
T ss_pred EEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCce-EEEEEccC---CcEEEEEecCCcccccccccCccccc
Confidence 888877653322221 1 22567889999999864 55555544 57777664322111 111111
Q ss_pred ---CCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEe
Q 046451 264 ---TKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSEL 303 (719)
Q Consensus 264 ---~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l 303 (719)
-..|.++.|++..+.+|+-+.+++.+.-.|. +|+.+..+
T Consensus 229 ~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~-~G~~~~~l 270 (316)
T COG3204 229 DLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDL-SGEVIELL 270 (316)
T ss_pred ceEeeccccceecCCCCcEEEEecCCceEEEEec-CCCeeeeE
Confidence 2357788899867788888888888888887 45554444
No 386
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=97.02 E-value=0.0013 Score=63.06 Aligned_cols=147 Identities=14% Similarity=0.108 Sum_probs=87.4
Q ss_pred EEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCe
Q 046451 188 ILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGV 267 (719)
Q Consensus 188 ~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V 267 (719)
+|...+.||.|+-++++..+....-...+......+.+ ...+++|+.++ .|++|...-.......+..-...|
T Consensus 32 ~l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~~~v~~~----~~~~~vG~~dg---~v~~~n~n~~g~~~d~~~s~~e~i 104 (238)
T KOG2444|consen 32 LLRATSADGLVRERKVRKHKESCRSERFIDEGQRVVTA----SAKLMVGTSDG---AVYVFNWNLEGAHSDRVCSGEESI 104 (238)
T ss_pred hhccccCCcccccchhhhhhhhhhhhhhhhcceeeccc----CceEEeecccc---eEEEecCCccchHHHhhhcccccc
Confidence 45566788999988887654332221111111111222 24588888888 899998753222111122222233
Q ss_pred eEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC-CCeEEeEEcCCCCCEEEEE--eCCCcEEEEeCCCCcc
Q 046451 268 IAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT-NWNFDIHWYPKIPGVISAS--SFDGKIGIYNIEGCSR 342 (719)
Q Consensus 268 ~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~-~~v~~l~~spdg~~~las~--s~Dg~I~iwd~~~~~~ 342 (719)
.++.-.-.++.+.++++.||.|+.|++.-++.+.....|+ ..+..+..+..+ .+|+.+ |.|..++.|+++.-+-
T Consensus 105 ~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd-~~i~~a~~S~d~~~k~W~ve~~~d 181 (238)
T KOG2444|consen 105 DLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSD-EFLKIADTSHDRVLKKWNVEKIKD 181 (238)
T ss_pred eeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCC-ceEEeeccccchhhhhcchhhhhc
Confidence 3332222255688999999999999999888888777776 444444444444 466666 6677777777765433
No 387
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=97.00 E-value=0.19 Score=54.87 Aligned_cols=129 Identities=12% Similarity=0.260 Sum_probs=77.6
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec-cccC--C--EEEEEEeCCCCC
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS-RHKG--P--VRGLEFNSFTPN 137 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~-~h~~--~--V~~l~fsp~~~~ 137 (719)
.-+.|..+.|.|-+..+ ...+|| ......|.||.+..... +.. +.+..-. ...+ + -..+.|+| ...
T Consensus 55 qFEhV~GlsW~P~~~~~---~paLLA-VQHkkhVtVWqL~~s~~-e~~---K~l~sQtcEi~e~~pvLpQGCVWHP-k~~ 125 (671)
T PF15390_consen 55 QFEHVHGLSWAPPCTAD---TPALLA-VQHKKHVTVWQLCPSTT-ERN---KLLMSQTCEIREPFPVLPQGCVWHP-KKA 125 (671)
T ss_pred ccceeeeeeecCcccCC---CCceEE-EeccceEEEEEeccCcc-ccc---cceeeeeeeccCCcccCCCcccccC-CCc
Confidence 34568899999975322 113444 44577899999853211 111 2222211 1111 1 13578999 667
Q ss_pred EEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC
Q 046451 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ 206 (719)
Q Consensus 138 ~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~ 206 (719)
.|++-..+..-.++++........ ... ...+.|.|.+|..||.+++++.+..-.-+|||-...
T Consensus 126 iL~VLT~~dvSV~~sV~~d~srVk-----aDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qK 188 (671)
T PF15390_consen 126 ILTVLTARDVSVLPSVHCDSSRVK-----ADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQK 188 (671)
T ss_pred eEEEEecCceeEeeeeeeCCceEE-----Eec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCchh
Confidence 777766655555667665544322 111 235689999999999877777777777889986543
No 388
>PHA03247 large tegument protein UL36; Provisional
Probab=97.00 E-value=0.16 Score=64.12 Aligned_cols=10 Identities=30% Similarity=0.574 Sum_probs=5.5
Q ss_pred cEEEEecCCC
Q 046451 244 ALRLWDMRNT 253 (719)
Q Consensus 244 ~I~lwDl~~~ 253 (719)
+++|||.|.+
T Consensus 2332 c~~LFDSR~g 2341 (3151)
T PHA03247 2332 CVTLFDSRAR 2341 (3151)
T ss_pred hhhhhcCCCC
Confidence 3566666543
No 389
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.98 E-value=0.029 Score=48.06 Aligned_cols=100 Identities=14% Similarity=0.199 Sum_probs=71.0
Q ss_pred EEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEE
Q 046451 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSE 302 (719)
Q Consensus 223 l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~ 302 (719)
+.|..||...|++|++|. .|++|+-. +.+.++.. ...|++++-.. ...|+.+-.+|+|-+|+- .+.+..
T Consensus 8 ~d~d~dg~~eLlvGs~D~---~IRvf~~~---e~~~Ei~e-~~~v~~L~~~~--~~~F~Y~l~NGTVGvY~~--~~RlWR 76 (111)
T PF14783_consen 8 FDFDGDGENELLVGSDDF---EIRVFKGD---EIVAEITE-TDKVTSLCSLG--GGRFAYALANGTVGVYDR--SQRLWR 76 (111)
T ss_pred EecCCCCcceEEEecCCc---EEEEEeCC---cEEEEEec-ccceEEEEEcC--CCEEEEEecCCEEEEEeC--cceeee
Confidence 456778888999999998 89999853 45566654 45777777664 477999999999999986 344455
Q ss_pred ecCCCCCeEEeEEcC---CCCCEEEEEeCCCcEEE
Q 046451 303 LPAGTNWNFDIHWYP---KIPGVISASSFDGKIGI 334 (719)
Q Consensus 303 l~~h~~~v~~l~~sp---dg~~~las~s~Dg~I~i 334 (719)
++.... +.++.+.. ||-.-|++|-.+|+|-+
T Consensus 77 iKSK~~-~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 77 IKSKNQ-VTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred eccCCC-eEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 554333 56665543 45457888888888754
No 390
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.94 E-value=0.036 Score=59.39 Aligned_cols=147 Identities=9% Similarity=0.067 Sum_probs=92.4
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC------CCEEEEEeCCCcEEEEcCCCCCCC
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT------PNLLASGADDGEICIWDLSAPAEP 159 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~------~~~lasgs~dg~I~iwdl~~~~~~ 159 (719)
+|..+..-..|+-.|+ ..| +.+....-|.. |.-+.+.++. ...-+.|-.|..|+-||.+-...-
T Consensus 348 il~~~~~~~~l~klDI------E~G---KIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~ 417 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDI------ERG---KIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKN 417 (644)
T ss_pred EeeCCCCcCcceeeec------ccc---eeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcc
Confidence 3444555566777777 455 66666665655 6666666521 112244667888999998744331
Q ss_pred CccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCC
Q 046451 160 SHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDE 239 (719)
Q Consensus 160 ~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d 239 (719)
.+.....+.........|++-..+| ++++|+.+|.|++||- .+....+...+....|..|..+.+|+.+|++|-.
T Consensus 418 -kl~~~q~kqy~~k~nFsc~aTT~sG--~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~t- 492 (644)
T KOG2395|consen 418 -KLAVVQSKQYSTKNNFSCFATTESG--YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATCKT- 492 (644)
T ss_pred -eeeeeeccccccccccceeeecCCc--eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEeccc-
Confidence 1100122222223456677777775 7999999999999997 4444444333789999999999999755444433
Q ss_pred CCCCcEEEEecC
Q 046451 240 DSSPALRLWDMR 251 (719)
Q Consensus 240 ~~~~~I~lwDl~ 251 (719)
.|.|.|+.
T Consensus 493 ----yLlLi~t~ 500 (644)
T KOG2395|consen 493 ----YLLLIDTL 500 (644)
T ss_pred ----EEEEEEEe
Confidence 67777764
No 391
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=96.93 E-value=0.099 Score=59.53 Aligned_cols=242 Identities=13% Similarity=0.111 Sum_probs=126.4
Q ss_pred CCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCC---
Q 046451 17 PDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVD--- 93 (719)
Q Consensus 17 pdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~d--- 93 (719)
-.+.++++|+.++.. .....++.||...+... ..........-.+++...+ .+.++|+.|
T Consensus 283 ~~~~l~~vGG~~~~~----~~~~~ve~yd~~~~~w~----~~a~m~~~r~~~~~~~~~~---------~lYv~GG~~~~~ 345 (571)
T KOG4441|consen 283 VSGKLVAVGGYNRQG----QSLRSVECYDPKTNEWS----SLAPMPSPRCRVGVAVLNG---------KLYVVGGYDSGS 345 (571)
T ss_pred CCCeEEEECCCCCCC----cccceeEEecCCcCcEe----ecCCCCcccccccEEEECC---------EEEEEccccCCC
Confidence 345677888877511 23456677877654222 1222233444456666554 588888888
Q ss_pred ---CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCc-----EEEEcCCCCCCCCccCCc
Q 046451 94 ---GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGE-----ICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 94 ---g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~-----I~iwdl~~~~~~~~~~~l 165 (719)
.++..||... + .+..+..+...........+ ++.+.|+|+.||. |..||..+.+.... ..+
T Consensus 346 ~~l~~ve~YD~~~------~-~W~~~a~M~~~R~~~~v~~l---~g~iYavGG~dg~~~l~svE~YDp~~~~W~~v-a~m 414 (571)
T KOG4441|consen 346 DRLSSVERYDPRT------N-QWTPVAPMNTKRSDFGVAVL---DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPV-APM 414 (571)
T ss_pred cccceEEEecCCC------C-ceeccCCccCccccceeEEE---CCEEEEEeccccccccccEEEecCCCCccccc-CCC
Confidence 3567777632 2 12333333333333222233 6789999999864 67788776553211 111
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCC------cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCC
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNG------TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDE 239 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg------~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d 239 (719)
.. .......+.+ + +.+.++|+.++ ++..||..+++....-.-.....-..++.-.+ .++++|+.+
T Consensus 415 ~~----~r~~~gv~~~--~-g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~~~--~iYvvGG~~ 485 (571)
T KOG4441|consen 415 LT----RRSGHGVAVL--G-GKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVLNG--KIYVVGGFD 485 (571)
T ss_pred Cc----ceeeeEEEEE--C-CEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEEECC--EEEEECCcc
Confidence 11 1112222222 2 35777777554 56788888765433222112222223333333 688888877
Q ss_pred CC--CCcEEEEecCCCCCc-eEEeeCCCCCeeEEEeCCCCCCeEEEEeCCC-----cEEEEECCCCe
Q 046451 240 DS--SPALRLWDMRNTMSP-VKEFVGHTKGVIAMSWCPNDSSYLLTCAKDN-----RTICWDTVSGE 298 (719)
Q Consensus 240 ~~--~~~I~lwDl~~~~~~-~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg-----~I~iwd~~~~~ 298 (719)
+. ..+|..||.++..-. +.........+..+.+ ++.+.++|+.|| +|..||..+.+
T Consensus 486 ~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~---~~~ly~vGG~~~~~~l~~ve~ydp~~d~ 549 (571)
T KOG4441|consen 486 GTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVL---GGKLYAVGGFDGNNNLNTVECYDPETDT 549 (571)
T ss_pred CCCccceEEEEcCCCCceeEcccCccccccccEEEE---CCEEEEEecccCccccceeEEcCCCCCc
Confidence 62 224788998764321 1112222222222333 667888888776 45566655443
No 392
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=96.91 E-value=0.0027 Score=42.10 Aligned_cols=39 Identities=23% Similarity=0.376 Sum_probs=34.1
Q ss_pred CeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEe
Q 046451 297 GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336 (719)
Q Consensus 297 ~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd 336 (719)
++.+..+..|...|.++.|++++ .++++++.|+.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDG-KYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCC-CEEEEecCCCeEEEcC
Confidence 45667777888899999999988 7999999999999996
No 393
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.82 E-value=0.2 Score=50.24 Aligned_cols=196 Identities=13% Similarity=0.152 Sum_probs=124.7
Q ss_pred CCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecC
Q 046451 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR 251 (719)
Q Consensus 172 h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~ 251 (719)
....+.++.|+++.. .|++......-.||=..+|+.+.++.-..-.....|.|..+| .++.+.... ..+.++.+.
T Consensus 84 ~~~nvS~LTynp~~r-tLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n--~fvi~dER~--~~l~~~~vd 158 (316)
T COG3204 84 ETANVSSLTYNPDTR-TLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGN--QFVIVDERD--RALYLFTVD 158 (316)
T ss_pred ccccccceeeCCCcc-eEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCC--EEEEEehhc--ceEEEEEEc
Confidence 344699999999975 555555555555665566888888775445556678888776 344444433 277777665
Q ss_pred CCCCce---------EEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE---EEEecCC-------CCCeEE
Q 046451 252 NTMSPV---------KEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI---VSELPAG-------TNWNFD 312 (719)
Q Consensus 252 ~~~~~~---------~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~---~~~l~~h-------~~~v~~ 312 (719)
.....+ ........+...++|.+ ....|+.+-+.+=+.||.+..+.. +.....+ -..|.+
T Consensus 159 ~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~-~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSg 237 (316)
T COG3204 159 ADTTVISAKVQKIPLGTTNKKNKGFEGLAWDP-VDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSG 237 (316)
T ss_pred CCccEEeccceEEeccccCCCCcCceeeecCC-CCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeecccc
Confidence 432211 11112256778999999 667777777777788887653321 1111111 124778
Q ss_pred eEEcCCCCCEEEEEeCCCcEEEEeCCCCcc----cccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEcc
Q 046451 313 IHWYPKIPGVISASSFDGKIGIYNIEGCSR----YGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHP 380 (719)
Q Consensus 313 l~~spdg~~~las~s~Dg~I~iwd~~~~~~----~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~ 380 (719)
+.|++....+|+-+.+++.+.-.|....-. ...+.+.+... .+...|++-.-+|.+...+.
T Consensus 238 l~~~~~~~~LLVLS~ESr~l~Evd~~G~~~~~lsL~~g~~gL~~d-------ipqaEGiamDd~g~lYIvSE 302 (316)
T COG3204 238 LEFNAITNSLLVLSDESRRLLEVDLSGEVIELLSLTKGNHGLSSD-------IPQAEGIAMDDDGNLYIVSE 302 (316)
T ss_pred ceecCCCCcEEEEecCCceEEEEecCCCeeeeEEeccCCCCCccc-------CCCcceeEECCCCCEEEEec
Confidence 899987768889898899998888877632 11333333321 23457888888898887764
No 394
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=96.82 E-value=0.0046 Score=67.28 Aligned_cols=97 Identities=21% Similarity=0.253 Sum_probs=78.4
Q ss_pred CCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEE-EEEEeCCCCCEEE
Q 046451 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVR-GLEFNSFTPNLLA 140 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~-~l~fsp~~~~~la 140 (719)
.....|..+.|+|.- .+||.+..+|.|.+..+. . +.+.++.-|...++ +++|.+ ||++||
T Consensus 18 ~l~~~i~~~ewnP~~--------dLiA~~t~~gelli~R~n-------~---qRlwtip~p~~~v~~sL~W~~-DGklla 78 (665)
T KOG4640|consen 18 SLPINIKRIEWNPKM--------DLIATRTEKGELLIHRLN-------W---QRLWTIPIPGENVTASLCWRP-DGKLLA 78 (665)
T ss_pred ccccceEEEEEcCcc--------chhheeccCCcEEEEEec-------c---ceeEeccCCCCccceeeeecC-CCCEEE
Confidence 345678889999986 799999999999998872 3 77888887777777 999999 799999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecC
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNS 183 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp 183 (719)
+|-.||+|++.|+.++..+..+ .......|.++.|.+
T Consensus 79 Vg~kdG~I~L~Dve~~~~l~~~------~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 79 VGFKDGTIRLHDVEKGGRLVSF------LFSVETDISKGIWDR 115 (665)
T ss_pred EEecCCeEEEEEccCCCceecc------ccccccchheeeccc
Confidence 9999999999999998876542 112345788888864
No 395
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.72 E-value=0.22 Score=49.62 Aligned_cols=211 Identities=16% Similarity=0.123 Sum_probs=127.5
Q ss_pred EEEEEEeCCCCCEEEEEeCCCc-EEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC-----CCcEE
Q 046451 126 VRGLEFNSFTPNLLASGADDGE-ICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY-----NGTTV 199 (719)
Q Consensus 126 V~~l~fsp~~~~~lasgs~dg~-I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~-----dg~I~ 199 (719)
...+.|+|....-++.+-.-|+ ..++|.........+...+. .| ..-.=.|+++|. +|+..-. -|.|-
T Consensus 70 ~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~---RH--fyGHGvfs~dG~-~LYATEndfd~~rGViG 143 (366)
T COG3490 70 GHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEG---RH--FYGHGVFSPDGR-LLYATENDFDPNRGVIG 143 (366)
T ss_pred cCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccC---ce--eecccccCCCCc-EEEeecCCCCCCCceEE
Confidence 3467888866666777766665 46889888777655422221 11 222346899985 5554433 27899
Q ss_pred EEECCCC-ceeEEecCCCCCceeEEEECCCCCcEEEEEeC------CC--------CCCcEEEEecCCCCCce-EEee--
Q 046451 200 VWDLKKQ-KPVISFSESIKRRCSVLQWNPDVATQLVVASD------ED--------SSPALRLWDMRNTMSPV-KEFV-- 261 (719)
Q Consensus 200 iwd~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~------d~--------~~~~I~lwDl~~~~~~~-~~~~-- 261 (719)
|||.+.+ +.+.++. .+.-.-..+.|..||+.+++..+. -+ -..++.+.|..++.... .++.
T Consensus 144 vYd~r~~fqrvgE~~-t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~ 222 (366)
T COG3490 144 VYDAREGFQRVGEFS-THGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPAS 222 (366)
T ss_pred EEecccccceecccc-cCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchh
Confidence 9999864 4556666 677778899999999755444431 01 12345555644432111 1222
Q ss_pred CCCCCeeEEEeCCCCCCeEEEEeCCCc-----EEEEECCCCeEEEEecC-------CCCCeEEeEEcCCCCCEEEEEeCC
Q 046451 262 GHTKGVIAMSWCPNDSSYLLTCAKDNR-----TICWDTVSGEIVSELPA-------GTNWNFDIHWYPKIPGVISASSFD 329 (719)
Q Consensus 262 ~h~~~V~~v~~sp~d~~~l~sgs~Dg~-----I~iwd~~~~~~~~~l~~-------h~~~v~~l~~spdg~~~las~s~D 329 (719)
.+.-.|..++... |+..++.|-..|. -.+=....++.+.-+.. ..+.|-+|+.+.+...+.+|+-..
T Consensus 223 l~~lSiRHld~g~-dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~G 301 (366)
T COG3490 223 LRQLSIRHLDIGR-DGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRG 301 (366)
T ss_pred hhhcceeeeeeCC-CCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCC
Confidence 2445677788877 7776666654332 11222234444444432 235678889887764556666667
Q ss_pred CcEEEEeCCCCcccc
Q 046451 330 GKIGIYNIEGCSRYG 344 (719)
Q Consensus 330 g~I~iwd~~~~~~~~ 344 (719)
+...|||..++..+.
T Consensus 302 N~~vi~da~tG~vv~ 316 (366)
T COG3490 302 NRAVIWDAATGAVVS 316 (366)
T ss_pred CeEEEEEcCCCcEEe
Confidence 788999999999866
No 396
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=96.67 E-value=0.0039 Score=41.28 Aligned_cols=37 Identities=32% Similarity=0.651 Sum_probs=32.3
Q ss_pred ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEE
Q 046451 256 PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293 (719)
Q Consensus 256 ~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd 293 (719)
++..+..|...|.+++|++ ++.++++++.|+.+++||
T Consensus 4 ~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSP-DGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECC-CCCEEEEecCCCeEEEcC
Confidence 4556677888999999999 779999999999999996
No 397
>PHA02713 hypothetical protein; Provisional
Probab=96.66 E-value=0.13 Score=58.62 Aligned_cols=192 Identities=11% Similarity=0.161 Sum_probs=98.5
Q ss_pred CCCEEEEEeCC------CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC-----cEEEEEC
Q 046451 135 TPNLLASGADD------GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG-----TTVVWDL 203 (719)
Q Consensus 135 ~~~~lasgs~d------g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg-----~I~iwd~ 203 (719)
++.+++.|+.+ ..+..||..+... ..+..+.. .......+.+ +| .+.+.|+.++ .+..||.
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W-~~~~~m~~----~R~~~~~~~~--~g-~IYviGG~~~~~~~~sve~Ydp 374 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENKIH-VELPPMIK----NRCRFSLAVI--DD-TIYAIGGQNGTNVERTIECYTM 374 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCCeE-eeCCCCcc----hhhceeEEEE--CC-EEEEECCcCCCCCCceEEEEEC
Confidence 56777777753 3477888876542 22222221 1112222222 23 5777787654 4788998
Q ss_pred CCCceeE--EecCCCCCceeEEEECCCCCcEEEEEeCCCC--------------------CCcEEEEecCCCC-CceEEe
Q 046451 204 KKQKPVI--SFSESIKRRCSVLQWNPDVATQLVVASDEDS--------------------SPALRLWDMRNTM-SPVKEF 260 (719)
Q Consensus 204 ~~~~~~~--~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~--------------------~~~I~lwDl~~~~-~~~~~~ 260 (719)
.+.+-.. .+. ........+.+ +| .+++.|+.++. ...+..||.++.. ..+..+
T Consensus 375 ~~~~W~~~~~mp-~~r~~~~~~~~--~g-~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m 450 (557)
T PHA02713 375 GDDKWKMLPDMP-IALSSYGMCVL--DQ-YIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNF 450 (557)
T ss_pred CCCeEEECCCCC-cccccccEEEE--CC-EEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCC
Confidence 8764322 111 11111222222 34 57777765421 1357888886542 111111
Q ss_pred eCCCCCeeEEEeCCCCCCeEEEEeCC------CcEEEEECCC-C--eEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCC-
Q 046451 261 VGHTKGVIAMSWCPNDSSYLLTCAKD------NRTICWDTVS-G--EIVSELPAGTNWNFDIHWYPKIPGVISASSFDG- 330 (719)
Q Consensus 261 ~~h~~~V~~v~~sp~d~~~l~sgs~D------g~I~iwd~~~-~--~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg- 330 (719)
....... +++.. ++++.+.||.+ ..+..||..+ . +.+..+.........+.+ ++ .+.+.|+.|+
T Consensus 451 ~~~r~~~-~~~~~--~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~-~iyv~Gg~~~~ 524 (557)
T PHA02713 451 WTGTIRP-GVVSH--KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DN-TIMMLHCYESY 524 (557)
T ss_pred CcccccC-cEEEE--CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CC-EEEEEeeecce
Confidence 1111111 22222 56777777754 2467899876 3 344444433332222333 44 7899999888
Q ss_pred -cEEEEeCCCCcccc
Q 046451 331 -KIGIYNIEGCSRYG 344 (719)
Q Consensus 331 -~I~iwd~~~~~~~~ 344 (719)
.+..||..+.+...
T Consensus 525 ~~~e~yd~~~~~W~~ 539 (557)
T PHA02713 525 MLQDTFNVYTYEWNH 539 (557)
T ss_pred eehhhcCcccccccc
Confidence 67777777766543
No 398
>PHA02713 hypothetical protein; Provisional
Probab=96.65 E-value=0.093 Score=59.80 Aligned_cols=161 Identities=9% Similarity=0.013 Sum_probs=84.6
Q ss_pred CCCEEEEEeCCC-----cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC-------------
Q 046451 135 TPNLLASGADDG-----EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG------------- 196 (719)
Q Consensus 135 ~~~~lasgs~dg-----~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg------------- 196 (719)
++.+.+.|+.++ .+..||..+..- ..+..+..... ....+.+ +| .+.+.|+.++
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W-~~~~~mp~~r~----~~~~~~~--~g-~IYviGG~~~~~~~~~~~~~~~~ 422 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDKW-KMLPDMPIALS----SYGMCVL--DQ-YIYIIGGRTEHIDYTSVHHMNSI 422 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCeE-EECCCCCcccc----cccEEEE--CC-EEEEEeCCCcccccccccccccc
Confidence 567888888764 478899886542 22222222111 1122222 33 5777776542
Q ss_pred ----------cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCC---CcEEEEecCC--CCCceEEee
Q 046451 197 ----------TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSS---PALRLWDMRN--TMSPVKEFV 261 (719)
Q Consensus 197 ----------~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~---~~I~lwDl~~--~~~~~~~~~ 261 (719)
.+..||.++.+-...-.......-.+++.. ++ .+++.|+.++.. ..+..||.++ ....+..+.
T Consensus 423 ~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~-~~-~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~ 500 (557)
T PHA02713 423 DMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSH-KD-DIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTE 500 (557)
T ss_pred cccccccccceEEEECCCCCeEeecCCCCcccccCcEEEE-CC-EEEEEeCCCCCCccceeEEEecCCCCCCeeEccccC
Confidence 477788876543221110011111122222 33 577777654311 2478899876 233333333
Q ss_pred CCCCCeeEEEeCCCCCCeEEEEeCCC--cEEEEECCCCeEEEEecCCCC
Q 046451 262 GHTKGVIAMSWCPNDSSYLLTCAKDN--RTICWDTVSGEIVSELPAGTN 308 (719)
Q Consensus 262 ~h~~~V~~v~~sp~d~~~l~sgs~Dg--~I~iwd~~~~~~~~~l~~h~~ 308 (719)
........+.+ ++++.++||.|+ .+..||..+.+-......|.+
T Consensus 501 ~~r~~~~~~~~---~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~~~~~ 546 (557)
T PHA02713 501 SRLSALHTILH---DNTIMMLHCYESYMLQDTFNVYTYEWNHICHQHSN 546 (557)
T ss_pred cccccceeEEE---CCEEEEEeeecceeehhhcCcccccccchhhhcCC
Confidence 33333333333 678999999888 777888877665444444443
No 399
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=96.65 E-value=0.88 Score=45.70 Aligned_cols=222 Identities=16% Similarity=0.132 Sum_probs=129.0
Q ss_pred ceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceee
Q 046451 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH 118 (719)
Q Consensus 39 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~ 118 (719)
..+.+.|+..-.......++......+-+.++.++.+ +...+..+.-++|.|+.+... ...+..
T Consensus 61 ~~l~i~ditn~~~~t~~~l~~~i~~~~l~~Dv~vse~----------yvyvad~ssGL~IvDIS~P~s------P~~~~~ 124 (370)
T COG5276 61 FILAILDITNVSLQTHDVLLSVINARDLFADVRVSEE----------YVYVADWSSGLRIVDISTPDS------PTLIGF 124 (370)
T ss_pred ceEeeccccCcccccCcceEEEEehhhhhheeEeccc----------EEEEEcCCCceEEEeccCCCC------cceecc
Confidence 3344555443322222223334455677778888764 677777788899999954322 122223
Q ss_pred eccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcE
Q 046451 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198 (719)
Q Consensus 119 l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I 198 (719)
+. -.+...++.. .++++.++..|.-+.+.|+.+..... +.+...........++.+-+ +...+..|+-+
T Consensus 125 ln-t~gyaygv~v---sGn~aYVadlddgfLivdvsdpssP~----lagrya~~~~d~~~v~ISGn---~AYvA~~d~GL 193 (370)
T COG5276 125 LN-TDGYAYGVYV---SGNYAYVADLDDGFLIVDVSDPSSPQ----LAGRYALPGGDTHDVAISGN---YAYVAWRDGGL 193 (370)
T ss_pred cc-CCceEEEEEe---cCCEEEEeeccCcEEEEECCCCCCce----eeeeeccCCCCceeEEEecC---eEEEEEeCCCe
Confidence 32 2244556665 57888888877778889998876543 33333333344466776643 66677888999
Q ss_pred EEEECCCCceeEEecC-CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEE---EeCC
Q 046451 199 VVWDLKKQKPVISFSE-SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAM---SWCP 274 (719)
Q Consensus 199 ~iwd~~~~~~~~~~~~-~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v---~~sp 274 (719)
.|.|+.+...-.-+.. .....+.++..+++ +.+++-.+.+ +.+-|..+...+...-.-....+.++ ..
T Consensus 194 ~ivDVSnp~sPvli~~~n~g~g~~sv~vsdn--r~y~vvy~eg----vlivd~s~~ssp~~~gsyet~~p~~~s~v~V-- 265 (370)
T COG5276 194 TIVDVSNPHSPVLIGSYNTGPGTYSVSVSDN--RAYLVVYDEG----VLIVDVSGPSSPTVFGSYETSNPVSISTVPV-- 265 (370)
T ss_pred EEEEccCCCCCeEEEEEecCCceEEEEecCC--eeEEEEcccc----eEEEecCCCCCceEeeccccCCcccccceec--
Confidence 9999987543222211 13347788888877 4566666665 88888876543322111122233333 33
Q ss_pred CCCCeEEEEeCCCcEEEEECCC
Q 046451 275 NDSSYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 275 ~d~~~l~sgs~Dg~I~iwd~~~ 296 (719)
.+++......+.-+-+.|+.+
T Consensus 266 -s~~~~Yvadga~gl~~idisn 286 (370)
T COG5276 266 -SGEYAYVADGAKGLPIIDISN 286 (370)
T ss_pred -ccceeeeeccccCceeEeccC
Confidence 346666666666666666653
No 400
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.64 E-value=1.1 Score=46.57 Aligned_cols=151 Identities=15% Similarity=0.168 Sum_probs=74.7
Q ss_pred CCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC
Q 046451 173 QGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN 252 (719)
Q Consensus 173 ~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~ 252 (719)
.+.+..+.-+++| .+++++.....+.-||--... -..+......+|..+.|.+++. +.+++ ..+ .|++=|...
T Consensus 144 ~gs~~~~~r~~dG-~~vavs~~G~~~~s~~~G~~~-w~~~~r~~~~riq~~gf~~~~~-lw~~~-~Gg---~~~~s~~~~ 216 (302)
T PF14870_consen 144 SGSINDITRSSDG-RYVAVSSRGNFYSSWDPGQTT-WQPHNRNSSRRIQSMGFSPDGN-LWMLA-RGG---QIQFSDDPD 216 (302)
T ss_dssp ---EEEEEE-TTS--EEEEETTSSEEEEE-TT-SS--EEEE--SSS-EEEEEE-TTS--EEEEE-TTT---EEEEEE-TT
T ss_pred cceeEeEEECCCC-cEEEEECcccEEEEecCCCcc-ceEEccCccceehhceecCCCC-EEEEe-CCc---EEEEccCCC
Confidence 3578888888887 467666655555677754321 2222224678999999999974 44444 554 677776221
Q ss_pred CCC----ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC---CCCCeEEeEEcCCCCCEEEE
Q 046451 253 TMS----PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA---GTNWNFDIHWYPKIPGVISA 325 (719)
Q Consensus 253 ~~~----~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~---h~~~v~~l~~spdg~~~las 325 (719)
..+ .+..+....-.+.+++|.+ ++...++|+ .|.+ +.....|+.-...+. -...++.|.|..+. +-++.
T Consensus 217 ~~~~w~~~~~~~~~~~~~~ld~a~~~-~~~~wa~gg-~G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~-~gf~l 292 (302)
T PF14870_consen 217 DGETWSEPIIPIKTNGYGILDLAYRP-PNEIWAVGG-SGTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPD-KGFVL 292 (302)
T ss_dssp EEEEE---B-TTSS--S-EEEEEESS-SS-EEEEES-TT-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETT-EEEEE
T ss_pred CccccccccCCcccCceeeEEEEecC-CCCEEEEeC-CccE-EEeCCCCccceECccccCCCCceEEEEEcCCC-ceEEE
Confidence 111 1111112234588999998 666666554 4543 445555655444332 23357888887664 34444
Q ss_pred EeCCCcEEEE
Q 046451 326 SSFDGKIGIY 335 (719)
Q Consensus 326 ~s~Dg~I~iw 335 (719)
+.+|.|.-|
T Consensus 293 -G~~G~ll~~ 301 (302)
T PF14870_consen 293 -GQDGVLLRY 301 (302)
T ss_dssp --STTEEEEE
T ss_pred -CCCcEEEEe
Confidence 458877655
No 401
>PRK13616 lipoprotein LpqB; Provisional
Probab=96.38 E-value=0.27 Score=56.03 Aligned_cols=183 Identities=12% Similarity=0.151 Sum_probs=92.5
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceE
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLV 87 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~l 87 (719)
..+.+.++|+||+.+|+...... ...+..-.||-...+.....+ . .....++-.|+++| +.|
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~----~~~d~~s~Lwv~~~gg~~~~l--t----~g~~~t~PsWspDG--------~~l 411 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGR----GAPDPASSLWVGPLGGVAVQV--L----EGHSLTRPSWSLDA--------DAV 411 (591)
T ss_pred cCcccceECCCCCEEEEEEeecC----CCCCcceEEEEEeCCCcceee--e----cCCCCCCceECCCC--------Cce
Confidence 46788999999998887652111 012223345554433322221 1 12247889999997 455
Q ss_pred EEEcCC------------CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEE---Ec
Q 046451 88 AGGLVD------------GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICI---WD 152 (719)
Q Consensus 88 asgs~d------------g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~i---wd 152 (719)
++.... +.+.+.+++ .+ .... ...+.|..+.|++ |+..|+... +|.|+| -.
T Consensus 412 w~v~dg~~~~~v~~~~~~gql~~~~vd------~g---e~~~---~~~g~Issl~wSp-DG~RiA~i~-~g~v~Va~Vvr 477 (591)
T PRK13616 412 WVVVDGNTVVRVIRDPATGQLARTPVD------AS---AVAS---RVPGPISELQLSR-DGVRAAMII-GGKVYLAVVEQ 477 (591)
T ss_pred EEEecCcceEEEeccCCCceEEEEecc------Cc---hhhh---ccCCCcCeEEECC-CCCEEEEEE-CCEEEEEEEEe
Confidence 554322 233333331 11 1111 2356799999999 777776655 477877 33
Q ss_pred CCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEE--CCCCceeEEec-CCCCCceeEEEECC
Q 046451 153 LSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWD--LKKQKPVISFS-ESIKRRCSVLQWNP 227 (719)
Q Consensus 153 l~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd--~~~~~~~~~~~-~~~~~~i~~l~~sp 227 (719)
...+. ..+.............+.++.|..++. + +++..++...+|. +..... ..+. ......+..|+=++
T Consensus 478 ~~~G~--~~l~~~~~l~~~l~~~~~~l~W~~~~~-L-~V~~~~~~~~v~~v~vDG~~~-~~~~~~n~~~~v~~vaa~~ 550 (591)
T PRK13616 478 TEDGQ--YALTNPREVGPGLGDTAVSLDWRTGDS-L-VVGRSDPEHPVWYVNLDGSNS-DALPSRNLSAPVVAVAASP 550 (591)
T ss_pred CCCCc--eeecccEEeecccCCccccceEecCCE-E-EEEecCCCCceEEEecCCccc-cccCCCCccCceEEEecCC
Confidence 33332 121111111112223467899999874 4 4555544444454 442221 1112 01245566666665
No 402
>PRK10115 protease 2; Provisional
Probab=96.35 E-value=1.3 Score=51.90 Aligned_cols=197 Identities=9% Similarity=0.052 Sum_probs=103.1
Q ss_pred CEEEEEEeCCCCCEEEEEeC-----CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC----
Q 046451 125 PVRGLEFNSFTPNLLASGAD-----DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN---- 195 (719)
Q Consensus 125 ~V~~l~fsp~~~~~lasgs~-----dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d---- 195 (719)
.+..+.|++ ++++|+.+.. ...|++.|+.++..+... +.. .-..++|.+++..++++...+
T Consensus 128 ~l~~~~~Sp-dg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~--i~~-------~~~~~~w~~D~~~~~y~~~~~~~~~ 197 (686)
T PRK10115 128 TLGGMAITP-DNTIMALAEDFLSRRQYGIRFRNLETGNWYPEL--LDN-------VEPSFVWANDSWTFYYVRKHPVTLL 197 (686)
T ss_pred EEeEEEECC-CCCEEEEEecCCCcEEEEEEEEECCCCCCCCcc--ccC-------cceEEEEeeCCCEEEEEEecCCCCC
Confidence 456788898 6777765533 235889999877532111 111 114699999886566665432
Q ss_pred -CcEEEEECCCC--ceeEEecCCCCCcee-EEEECCCCCcEEEEEeCCCCCCcEEEEecCCC-CCceEEeeCCCCCeeEE
Q 046451 196 -GTTVVWDLKKQ--KPVISFSESIKRRCS-VLQWNPDVATQLVVASDEDSSPALRLWDMRNT-MSPVKEFVGHTKGVIAM 270 (719)
Q Consensus 196 -g~I~iwd~~~~--~~~~~~~~~~~~~i~-~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~-~~~~~~~~~h~~~V~~v 270 (719)
..|+.+++.++ +....+.. ...... .+..+.+++.++ ..+..+.++.+.+|+.... ......+.........+
T Consensus 198 ~~~v~~h~lgt~~~~d~lv~~e-~~~~~~~~~~~s~d~~~l~-i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 275 (686)
T PRK10115 198 PYQVWRHTIGTPASQDELVYEE-KDDTFYVSLHKTTSKHYVV-IHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSL 275 (686)
T ss_pred CCEEEEEECCCChhHCeEEEee-CCCCEEEEEEEcCCCCEEE-EEEECCccccEEEEECcCCCCCceEEEECCCCCEEEE
Confidence 36888888887 33333431 222222 334454775555 4444444457999995332 12222222122222222
Q ss_pred EeCCCCCCeEEEEeC---CCcEEEEECC-CCeEEEEecCC-C-CCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 271 SWCPNDSSYLLTCAK---DNRTICWDTV-SGEIVSELPAG-T-NWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 271 ~~sp~d~~~l~sgs~---Dg~I~iwd~~-~~~~~~~l~~h-~-~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
. +. ++.+++.... ...|...++. .++. ..+-.+ . ..|..+.++.+ .++++...+|.-+++-+.
T Consensus 276 ~-~~-~~~ly~~tn~~~~~~~l~~~~~~~~~~~-~~l~~~~~~~~i~~~~~~~~--~l~~~~~~~g~~~l~~~~ 344 (686)
T PRK10115 276 D-HY-QHRFYLRSNRHGKNFGLYRTRVRDEQQW-EELIPPRENIMLEGFTLFTD--WLVVEERQRGLTSLRQIN 344 (686)
T ss_pred E-eC-CCEEEEEEcCCCCCceEEEecCCCcccC-eEEECCCCCCEEEEEEEECC--EEEEEEEeCCEEEEEEEc
Confidence 2 32 3333333322 2234444554 2222 223233 2 35888888843 588888888876665554
No 403
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=96.35 E-value=0.12 Score=55.11 Aligned_cols=243 Identities=13% Similarity=0.134 Sum_probs=101.3
Q ss_pred CCCEEEEEe-CCCcEEEEcCCCCCCCCcc-CCccCCCCCCC---CCeEEEEecCCCCcEEEEEeC------CCcEEEEEC
Q 046451 135 TPNLLASGA-DDGEICIWDLSAPAEPSHF-PPLRGNGSAAQ---GEISFVSWNSKVQHILASTSY------NGTTVVWDL 203 (719)
Q Consensus 135 ~~~~lasgs-~dg~I~iwdl~~~~~~~~~-~~l~~~~~~h~---~~I~~l~~sp~g~~~l~s~s~------dg~I~iwd~ 203 (719)
+.++|+..+ .++.|+|+|+.+.-..-.+ ..+.......+ ..-..+..-++| .+++++-. -|.+.++|-
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G-~imIS~lGd~~G~g~Ggf~llD~ 164 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDG-RIMISALGDADGNGPGGFVLLDG 164 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS---EEEEEEEETTS-S--EEEEE-T
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCc-cEEEEeccCCCCCCCCcEEEEcC
Confidence 456666665 7889999999855432221 10110000000 112223334665 36665422 256888888
Q ss_pred CCCceeEEecC--CCCCceeEEEECCCCCcEEEEEeCCC-----------------CCCcEEEEecCCCCCceEEeeCCC
Q 046451 204 KKQKPVISFSE--SIKRRCSVLQWNPDVATQLVVASDED-----------------SSPALRLWDMRNTMSPVKEFVGHT 264 (719)
Q Consensus 204 ~~~~~~~~~~~--~~~~~i~~l~~sp~g~~~l~~~s~d~-----------------~~~~I~lwDl~~~~~~~~~~~~h~ 264 (719)
++.+.+..... .....-..+-|.+.. +.++++.-.. ...+|.+||+.+. +.+.++.--.
T Consensus 165 ~tf~v~g~We~~~~~~~~gYDfw~qpr~-nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r-~~~Q~idLg~ 242 (461)
T PF05694_consen 165 ETFEVKGRWEKDRGPQPFGYDFWYQPRH-NVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTR-KLLQTIDLGE 242 (461)
T ss_dssp TT--EEEE--SB-TT------EEEETTT-TEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTT-EEEEEEES-T
T ss_pred ccccccceeccCCCCCCCCCCeEEcCCC-CEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCC-cEeeEEecCC
Confidence 88877776663 223344667777764 4555553221 1238999999764 6666665433
Q ss_pred C--CeeEEEeCCC-CCCe-EEEEeCCCcEEEE-ECCCCe----EEEEecCC-----------------CCCeEEeEEcCC
Q 046451 265 K--GVIAMSWCPN-DSSY-LLTCAKDNRTICW-DTVSGE----IVSELPAG-----------------TNWNFDIHWYPK 318 (719)
Q Consensus 265 ~--~V~~v~~sp~-d~~~-l~sgs~Dg~I~iw-d~~~~~----~~~~l~~h-----------------~~~v~~l~~spd 318 (719)
. ....|.|..+ +..+ ++.+.-.++|..| ....++ .+.++... ..-|++|.+|-|
T Consensus 243 ~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlD 322 (461)
T PF05694_consen 243 EGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLD 322 (461)
T ss_dssp TEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TT
T ss_pred CCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccC
Confidence 2 3456666531 2333 4444445555544 334442 33333221 234799999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcccc-cCCCCCCCCCc-------cCcceecCCCceeeeeCCcEEEEcc
Q 046451 319 IPGVISASSFDGKIGIYNIEGCSRYG-VGDSNFSAAPL-------RAPKWYKRPAGASFGFGGKLVSFHP 380 (719)
Q Consensus 319 g~~~las~s~Dg~I~iwd~~~~~~~~-~~~~~~~~~~~-------~~p~w~~~~~~~s~s~~Gklv~~~~ 380 (719)
.+.+.+++-.+|.|+.||+..-..-. .+...++.... .--+....+.-+..|-|||-+.+++
T Consensus 323 DrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 323 DRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN 392 (461)
T ss_dssp S-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred CCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence 96666777779999999998743322 11111111100 0001122234568899999887764
No 404
>PRK13616 lipoprotein LpqB; Provisional
Probab=96.22 E-value=0.15 Score=58.20 Aligned_cols=151 Identities=10% Similarity=0.100 Sum_probs=84.4
Q ss_pred CeEEEEecCCCCcEEEEEe-----CCC--cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCC-------
Q 046451 175 EISFVSWNSKVQHILASTS-----YNG--TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED------- 240 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s-----~dg--~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~------- 240 (719)
.+...+++++|+.++++.. .|. .|.+++.. +.. ..+. .......-.|+++|+.+.++...+.
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt--~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~ 426 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVL--EGHSLTRPSWSLDADAVWVVVDGNTVVRVIRD 426 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeee--cCCCCCCceECCCCCceEEEecCcceEEEecc
Confidence 6788999999875555542 233 45555643 222 3333 2234788999999865444432111
Q ss_pred -CCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEE---EECCCCeE-E---EEec-CCCCCeE
Q 046451 241 -SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC---WDTVSGEI-V---SELP-AGTNWNF 311 (719)
Q Consensus 241 -~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~i---wd~~~~~~-~---~~l~-~h~~~v~ 311 (719)
..+.+.+.+++.+ +... .....|..+.||+ ||..|+... +++|++ -....|+. + ..+. +-...+.
T Consensus 427 ~~~gql~~~~vd~g-e~~~---~~~g~Issl~wSp-DG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~ 500 (591)
T PRK13616 427 PATGQLARTPVDAS-AVAS---RVPGPISELQLSR-DGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAV 500 (591)
T ss_pred CCCceEEEEeccCc-hhhh---ccCCCcCeEEECC-CCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccc
Confidence 1123444455432 1111 2345799999999 888777655 577777 45445541 1 1122 2233368
Q ss_pred EeEEcCCCCCEEEEEeCCCcEEEEeC
Q 046451 312 DIHWYPKIPGVISASSFDGKIGIYNI 337 (719)
Q Consensus 312 ~l~~spdg~~~las~s~Dg~I~iwd~ 337 (719)
++.|..++ .++ .+..++...+|.+
T Consensus 501 ~l~W~~~~-~L~-V~~~~~~~~v~~v 524 (591)
T PRK13616 501 SLDWRTGD-SLV-VGRSDPEHPVWYV 524 (591)
T ss_pred cceEecCC-EEE-EEecCCCCceEEE
Confidence 89999998 454 4444444444544
No 405
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=96.14 E-value=0.0083 Score=57.63 Aligned_cols=143 Identities=12% Similarity=0.071 Sum_probs=72.6
Q ss_pred EEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCC
Q 046451 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIK 217 (719)
Q Consensus 138 ~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~ 217 (719)
.|..-+.||.|.-++++..+.... . ...+.+.---......+++|+.+|.|++|+...............
T Consensus 32 ~l~~~sa~~~v~~~~~~k~k~s~r-----s-----e~~~~e~~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~ 101 (238)
T KOG2444|consen 32 LLRATSADGLVRERKVRKHKESCR-----S-----ERFIDEGQRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGE 101 (238)
T ss_pred hhccccCCcccccchhhhhhhhhh-----h-----hhhhhcceeecccCceEEeecccceEEEecCCccchHHHhhhccc
Confidence 344556778888887765443211 0 001111111112234689999999999998873322222221233
Q ss_pred CceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCC-CCeeEEEeCCCCCCeEEEE--eCCCcEEEEEC
Q 046451 218 RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHT-KGVIAMSWCPNDSSYLLTC--AKDNRTICWDT 294 (719)
Q Consensus 218 ~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~-~~V~~v~~sp~d~~~l~sg--s~Dg~I~iwd~ 294 (719)
..|.++.-.-+...+.+++..++ .|+.|++.-. +.+.....|. ..+..+..+. .+++|.++ |.|..++.|++
T Consensus 102 e~i~~~Ip~~~~~~~~c~~~~dg---~ir~~n~~p~-k~~g~~g~h~~~~~e~~ivv~-sd~~i~~a~~S~d~~~k~W~v 176 (238)
T KOG2444|consen 102 ESIDLGIPNGRDSSLGCVGAQDG---RIRACNIKPN-KVLGYVGQHNFESGEELIVVG-SDEFLKIADTSHDRVLKKWNV 176 (238)
T ss_pred ccceeccccccccceeEEeccCC---ceeeeccccC-ceeeeeccccCCCcceeEEec-CCceEEeeccccchhhhhcch
Confidence 33433333333234778888887 8999998643 3333333444 2333333332 33444444 45555555554
Q ss_pred C
Q 046451 295 V 295 (719)
Q Consensus 295 ~ 295 (719)
.
T Consensus 177 e 177 (238)
T KOG2444|consen 177 E 177 (238)
T ss_pred h
Confidence 3
No 406
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=96.08 E-value=0.7 Score=54.25 Aligned_cols=238 Identities=8% Similarity=-0.013 Sum_probs=119.5
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccC--------CEEEEEEeC---------------CCCCEEEE
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKG--------PVRGLEFNS---------------FTPNLLAS 141 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~--------~V~~l~fsp---------------~~~~~las 141 (719)
+.|+.++.++.|.-.|. .++ +.+.++..... ..+.+.+.. .+...|+.
T Consensus 195 g~lYv~t~~~~V~ALDa------~TG---k~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~ 265 (764)
T TIGR03074 195 DTLYLCTPHNKVIALDA------ATG---KEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIIL 265 (764)
T ss_pred CEEEEECCCCeEEEEEC------CCC---cEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEE
Confidence 47777777888888887 444 44444332111 112333321 12357888
Q ss_pred EeCCCcEEEEcCCCCCCCCccCC-----ccCCCCCCCCCeEEEEecC--CCCcEEEEEeC----------CCcEEEEECC
Q 046451 142 GADDGEICIWDLSAPAEPSHFPP-----LRGNGSAAQGEISFVSWNS--KVQHILASTSY----------NGTTVVWDLK 204 (719)
Q Consensus 142 gs~dg~I~iwdl~~~~~~~~~~~-----l~~~~~~h~~~I~~l~~sp--~g~~~l~s~s~----------dg~I~iwd~~ 204 (719)
++.|+.|.-.|.++++....|.. ++.........-..+.-.| .+ ..+++|+. +|.|+-+|.+
T Consensus 266 ~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~-g~VIvG~~v~d~~~~~~~~G~I~A~Da~ 344 (764)
T TIGR03074 266 PTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAG-TTVVIGGRVADNYSTDEPSGVIRAFDVN 344 (764)
T ss_pred ecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEEC-CEEEEEecccccccccCCCcEEEEEECC
Confidence 89999999999999887654311 0000000000000000011 01 25555543 6889999999
Q ss_pred CCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe
Q 046451 205 KQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA 284 (719)
Q Consensus 205 ~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs 284 (719)
+++.+..+....... ... -..++ .+..++.+. =...-+|.+.+ .+..-.+.. +..+.. ..+......
T Consensus 345 TGkl~W~~~~g~p~~-~~~--~~~g~-~~~~gg~n~--W~~~s~D~~~g--lvy~ptGn~----~pd~~g-~~r~~~~n~ 411 (764)
T TIGR03074 345 TGALVWAWDPGNPDP-TAP--PAPGE-TYTRNTPNS--WSVASYDEKLG--LVYLPMGNQ----TPDQWG-GDRTPADEK 411 (764)
T ss_pred CCcEeeEEecCCCCc-ccC--CCCCC-EeccCCCCc--cCceEEcCCCC--eEEEeCCCc----cccccC-CccccCccc
Confidence 999998887321111 111 11232 222121110 02334444332 111111111 111111 111111122
Q ss_pred CCCcEEEEECCCCeEEEEecCCCCCeEE---------eEEcC-CC--CCEEEEEeCCCcEEEEeCCCCccccc
Q 046451 285 KDNRTICWDTVSGEIVSELPAGTNWNFD---------IHWYP-KI--PGVISASSFDGKIGIYNIEGCSRYGV 345 (719)
Q Consensus 285 ~Dg~I~iwd~~~~~~~~~l~~h~~~v~~---------l~~sp-dg--~~~las~s~Dg~I~iwd~~~~~~~~~ 345 (719)
..+.|.-.|.++|+.+..++.....+++ +.+.. +| ...++.++.+|.+.++|.++++.+-.
T Consensus 412 y~~slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~ 484 (764)
T TIGR03074 412 YSSSLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVP 484 (764)
T ss_pred ccceEEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEee
Confidence 3567888899999988877652211222 12222 44 13889999999999999999988663
No 407
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.06 E-value=0.021 Score=65.93 Aligned_cols=102 Identities=16% Similarity=0.223 Sum_probs=73.5
Q ss_pred cEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCe
Q 046451 231 TQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWN 310 (719)
Q Consensus 231 ~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v 310 (719)
..++.|++.+ .|-..|++..-.+...-..-.++|++++|+. +|.+++.|-.+|.|.+||+..++.++.+..|....
T Consensus 100 ~~ivi~Ts~g---hvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~-dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~ 175 (1206)
T KOG2079|consen 100 VPIVIGTSHG---HVLLSDMTGNLGPLHQNERVQGPVTSVAFNQ-DGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPV 175 (1206)
T ss_pred eeEEEEcCch---hhhhhhhhcccchhhcCCccCCcceeeEecC-CCceeccccCCCcEEEEEccCCcceeeeeecCCcc
Confidence 3577777776 7888888653222222233457999999998 99999999999999999999999988887765544
Q ss_pred ---EEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 311 ---FDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 311 ---~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
..+.|..++ ..+.++...|. +|++.=
T Consensus 176 t~vi~v~~t~~n-S~llt~D~~Gs--f~~lv~ 204 (1206)
T KOG2079|consen 176 TGVIFVGRTSQN-SKLLTSDTGGS--FWKLVF 204 (1206)
T ss_pred ceEEEEEEeCCC-cEEEEccCCCc--eEEEEe
Confidence 444555565 46777766665 666543
No 408
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.00 E-value=0.11 Score=60.28 Aligned_cols=103 Identities=22% Similarity=0.414 Sum_probs=70.8
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
..|+.|+..|.|...|..... .....-..-.++|++++|+. ++.+++.|-.+|.|.+||+.+++..+.+
T Consensus 100 ~~ivi~Ts~ghvl~~d~~~nL--------~~~~~ne~v~~~Vtsvafn~-dg~~l~~G~~~G~V~v~D~~~~k~l~~i-- 168 (1206)
T KOG2079|consen 100 VPIVIGTSHGHVLLSDMTGNL--------GPLHQNERVQGPVTSVAFNQ-DGSLLLAGLGDGHVTVWDMHRAKILKVI-- 168 (1206)
T ss_pred eeEEEEcCchhhhhhhhhccc--------chhhcCCccCCcceeeEecC-CCceeccccCCCcEEEEEccCCcceeee--
Confidence 478899999999988863210 11222233467999999998 8999999999999999999998876653
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEEC
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDL 203 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~ 203 (719)
..+...+. .|..+.|..++. .++++...|. +|.+
T Consensus 169 -~e~~ap~t-~vi~v~~t~~nS-~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 169 -TEHGAPVT-GVIFVGRTSQNS-KLLTSDTGGS--FWKL 202 (1206)
T ss_pred -eecCCccc-eEEEEEEeCCCc-EEEEccCCCc--eEEE
Confidence 22222333 444555555543 7777777775 5544
No 409
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=95.99 E-value=1.7 Score=50.58 Aligned_cols=75 Identities=13% Similarity=0.121 Sum_probs=43.1
Q ss_pred chhhHHHHHHHHHHHHHHhCCCCCCccchhhhhhHHHHHHHHHHHHccCC--CC--HHHHHHHHHHHHHHhcCChhHHHh
Q 046451 611 QKPVINTLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGD--IS--KNAADKLVQLCQALDNNDFGTALQ 686 (719)
Q Consensus 611 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~k~~~~d~~krl~~l~~~l~~~~--ls--~~~~~~l~~l~~~~~~~~~~~a~~ 686 (719)
.+..++.|.+..+.|++.-. ....+..++++||++.|-......- |. .+-++.|.+-+..|.+ .|+.|.+
T Consensus 534 ~~E~l~lL~~a~~vlreeYi-----~~~~~ar~ei~~rv~~Lk~~~e~Ql~~L~~l~e~~~~l~~~ae~Lae-R~e~a~d 607 (717)
T PF10168_consen 534 PQECLELLSQATKVLREEYI-----EKQDLAREEIQRRVKLLKQQKEQQLKELQELQEERKSLRESAEKLAE-RYEEAKD 607 (717)
T ss_pred CHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 44567778877777764310 0113445788888777776665422 21 1235555556666666 4777776
Q ss_pred heeee
Q 046451 687 IQVLL 691 (719)
Q Consensus 687 i~~~l 691 (719)
-|-.|
T Consensus 608 ~Qe~L 612 (717)
T PF10168_consen 608 KQEKL 612 (717)
T ss_pred HHHHH
Confidence 66544
No 410
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.95 E-value=0.42 Score=53.74 Aligned_cols=203 Identities=12% Similarity=0.149 Sum_probs=107.3
Q ss_pred CCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCC
Q 046451 93 DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAA 172 (719)
Q Consensus 93 dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h 172 (719)
.-.|+||++ +| ..+..+.-..+.+..+.|+. ...|++...||+++||++....... + -.+ ....
T Consensus 63 ~~~I~If~~-------sG---~lL~~~~w~~~~lI~mgWs~--~eeLI~v~k~g~v~Vy~~~ge~ie~-~--svg-~e~~ 126 (829)
T KOG2280|consen 63 RPYIRIFNI-------SG---QLLGRILWKHGELIGMGWSD--DEELICVQKDGTVHVYGLLGEFIES-N--SVG-FESQ 126 (829)
T ss_pred ceeEEEEec-------cc---cchHHHHhcCCCeeeecccC--CceEEEEeccceEEEeecchhhhcc-c--ccc-cccc
Confidence 345788886 34 55555555555888999985 4678888999999999987543221 1 011 1112
Q ss_pred CCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCC--ceeEEEECCCCCc-EEEEEe--CCCCCCcEEE
Q 046451 173 QGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR--RCSVLQWNPDVAT-QLVVAS--DEDSSPALRL 247 (719)
Q Consensus 173 ~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~--~i~~l~~sp~g~~-~l~~~s--~d~~~~~I~l 247 (719)
...|..+.|..+| +++-..+|.+.+.+-.....+.++...... ..+|-....++.. .++..- ..+ ..+
T Consensus 127 ~~~I~ec~~f~~G---Vavlt~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~----~~~ 199 (829)
T KOG2280|consen 127 MSDIVECRFFHNG---VAVLTVSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG----LHI 199 (829)
T ss_pred cCceeEEEEecCc---eEEEecCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh----hcc
Confidence 2245555555554 333444555555443322223333211111 1122222222111 111111 111 122
Q ss_pred EecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC-CCeEEeEEcCCC
Q 046451 248 WDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT-NWNFDIHWYPKI 319 (719)
Q Consensus 248 wDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~-~~v~~l~~spdg 319 (719)
+...........+......+..+..|+ +.++|+--..+|.|.+-+....+++.++.... ..-..++|.-+.
T Consensus 200 ~q~~~~~~q~~~~~~~~~~~~ki~VS~-n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p~qm~Wcgnd 271 (829)
T KOG2280|consen 200 CQVEESRVQLHALSWPNSSVVKISVSP-NRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDPPKQMAWCGND 271 (829)
T ss_pred cceecccccccccCCCCceEEEEEEcC-CcceEEEEecCCcEEEEecchhhhhhccCCCCCCchHhceeecCC
Confidence 222222222223332335677889999 88999999999999999998888887776321 223366676554
No 411
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=95.94 E-value=1.1 Score=47.49 Aligned_cols=246 Identities=14% Similarity=0.153 Sum_probs=117.9
Q ss_pred CEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCC---CCcEEEEEeCC------
Q 046451 125 PVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK---VQHILASTSYN------ 195 (719)
Q Consensus 125 ~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~---g~~~l~s~s~d------ 195 (719)
.-+.|+|.| ++++|+ +...|.|++++ ..+.....+..+.............++++++ ...+.++.+..
T Consensus 3 ~P~~~a~~p-dG~l~v-~e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~ 79 (331)
T PF07995_consen 3 NPRSMAFLP-DGRLLV-AERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGD 79 (331)
T ss_dssp SEEEEEEET-TSCEEE-EETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSS
T ss_pred CceEEEEeC-CCcEEE-EeCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCC
Confidence 357899999 676665 56699999999 3333212111111112234557899999994 22344443321
Q ss_pred --CcEEEEECCCC-------ceeE-EecC--CCCCceeEEEECCCCCcEEEEEeCCCC----------CCcEEEEecCCC
Q 046451 196 --GTTVVWDLKKQ-------KPVI-SFSE--SIKRRCSVLQWNPDVATQLVVASDEDS----------SPALRLWDMRNT 253 (719)
Q Consensus 196 --g~I~iwd~~~~-------~~~~-~~~~--~~~~~i~~l~~sp~g~~~l~~~s~d~~----------~~~I~lwDl~~~ 253 (719)
..|.-|.+..+ +.+. .+.. ........|.|.||| .++++.++... .+.|.-.|....
T Consensus 80 ~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG-~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~ 158 (331)
T PF07995_consen 80 NDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDG-KLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGS 158 (331)
T ss_dssp EEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTS-EEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSS
T ss_pred cceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCC-cEEEEeCCCCCcccccccccccceEEEecccCc
Confidence 23444544433 1121 2221 234455679999999 55555555442 233433443211
Q ss_pred C---C--------ceEEe-eCCCCCeeEEEeCCCCCCeEEEE-eCCCcEEEEECCCCe----------------------
Q 046451 254 M---S--------PVKEF-VGHTKGVIAMSWCPNDSSYLLTC-AKDNRTICWDTVSGE---------------------- 298 (719)
Q Consensus 254 ~---~--------~~~~~-~~h~~~V~~v~~sp~d~~~l~sg-s~Dg~I~iwd~~~~~---------------------- 298 (719)
. . ....+ .++ .....++|++..++++++= +.|+.=.|..+..|.
T Consensus 159 ~p~dnP~~~~~~~~~~i~A~Gl-RN~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~~~ 237 (331)
T PF07995_consen 159 IPADNPFVGDDGADSEIYAYGL-RNPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGDAP 237 (331)
T ss_dssp B-TTSTTTTSTTSTTTEEEE---SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECTGS
T ss_pred CCCCCccccCCCceEEEEEeCC-CccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCcccccc
Confidence 0 0 01111 222 2346789998325554432 223222222222211
Q ss_pred -------EEEEecCCCCCeEEeEEcCCCC------CEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCC
Q 046451 299 -------IVSELPAGTNWNFDIHWYPKIP------GVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPA 365 (719)
Q Consensus 299 -------~~~~l~~h~~~v~~l~~spdg~------~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~ 365 (719)
.+..+..| ..+..+.|..... .+|++.-..+.|...+++....+...+..+. .+-.++.
T Consensus 238 ~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~~~~r~~ 309 (331)
T PF07995_consen 238 SCPGFVPPVFAYPPH-SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLG-------GFGGRPR 309 (331)
T ss_dssp S-TTS---SEEETTT---EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECT-------TSSS-EE
T ss_pred CCCCcCccceeecCc-cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccc-------cCCCCce
Confidence 22333333 4477777764321 3555555567888888875543332222221 1333567
Q ss_pred ceeeeeCCcEEEEccCCC
Q 046451 366 GASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 366 ~~s~s~~Gklv~~~~~~~ 383 (719)
.++++.||.|++.+..++
T Consensus 310 ~v~~~pDG~Lyv~~d~~G 327 (331)
T PF07995_consen 310 DVAQGPDGALYVSDDSDG 327 (331)
T ss_dssp EEEEETTSEEEEEE-TTT
T ss_pred EEEEcCCCeEEEEECCCC
Confidence 899999999988876444
No 412
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=95.94 E-value=0.82 Score=45.90 Aligned_cols=157 Identities=12% Similarity=0.014 Sum_probs=101.7
Q ss_pred CeEEEEecCCCCcEEEEEeCCC--cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC
Q 046451 175 EISFVSWNSKVQHILASTSYNG--TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN 252 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~dg--~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~ 252 (719)
....+.|..+| .++-+.+.-| .|+.+|+.+++...........--..++...| .++...-.++ ...+||..+
T Consensus 46 FTQGL~~~~~g-~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d--~l~qLTWk~~---~~f~yd~~t 119 (264)
T PF05096_consen 46 FTQGLEFLDDG-TLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGD--KLYQLTWKEG---TGFVYDPNT 119 (264)
T ss_dssp EEEEEEEEETT-EEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETT--EEEEEESSSS---EEEEEETTT
T ss_pred cCccEEecCCC-EEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECC--EEEEEEecCC---eEEEEcccc
Confidence 45577886665 5677776655 79999999998876665333333445555544 5666666666 899999976
Q ss_pred CCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCC-----CCCeEEeEEcCCCCCEEEEEe
Q 046451 253 TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAG-----TNWNFDIHWYPKIPGVISASS 327 (719)
Q Consensus 253 ~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h-----~~~v~~l~~spdg~~~las~s 327 (719)
. +.+.++.-. +.=+.++. |++.|+.+....+|+++|..+.+.+.++... -..++.+.|. +| .+.|-.-
T Consensus 120 l-~~~~~~~y~-~EGWGLt~---dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G-~IyANVW 192 (264)
T PF05096_consen 120 L-KKIGTFPYP-GEGWGLTS---DGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NG-KIYANVW 192 (264)
T ss_dssp T-EEEEEEE-S-SS--EEEE---CSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TT-EEEEEET
T ss_pred c-eEEEEEecC-CcceEEEc---CCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cC-EEEEEeC
Confidence 4 556666432 34466663 6677887777889999999888777766532 1246677776 45 5667676
Q ss_pred CCCcEEEEeCCCCcccc
Q 046451 328 FDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 328 ~Dg~I~iwd~~~~~~~~ 344 (719)
....|...|.++|+...
T Consensus 193 ~td~I~~Idp~tG~V~~ 209 (264)
T PF05096_consen 193 QTDRIVRIDPETGKVVG 209 (264)
T ss_dssp TSSEEEEEETTT-BEEE
T ss_pred CCCeEEEEeCCCCeEEE
Confidence 77788888999988866
No 413
>PRK13684 Ycf48-like protein; Provisional
Probab=95.82 E-value=3.2 Score=44.06 Aligned_cols=152 Identities=12% Similarity=0.069 Sum_probs=83.3
Q ss_pred CCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC
Q 046451 173 QGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN 252 (719)
Q Consensus 173 ~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~ 252 (719)
...+.++.+.+++ .+ +..+..|.+..-.-..++....+.......+.++.+.+++. +++++ ..+ .+++=....
T Consensus 172 ~g~~~~i~~~~~g-~~-v~~g~~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~-~~~vg-~~G---~~~~~s~d~ 244 (334)
T PRK13684 172 AGVVRNLRRSPDG-KY-VAVSSRGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGN-LWMLA-RGG---QIRFNDPDD 244 (334)
T ss_pred cceEEEEEECCCC-eE-EEEeCCceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCC-EEEEe-cCC---EEEEccCCC
Confidence 4478899999885 34 44555665543211222323333324567889999999874 45544 444 443322222
Q ss_pred CCCceEEeeC----CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec---CCCCCeEEeEEcCCCCCEEEE
Q 046451 253 TMSPVKEFVG----HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP---AGTNWNFDIHWYPKIPGVISA 325 (719)
Q Consensus 253 ~~~~~~~~~~----h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~---~h~~~v~~l~~spdg~~~las 325 (719)
+.. -..... ....+.++.|.+ ++.+ +.++.+|.|. .....|+.-..+. .-....+.+.|..++ ..+++
T Consensus 245 G~s-W~~~~~~~~~~~~~l~~v~~~~-~~~~-~~~G~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 319 (334)
T PRK13684 245 LES-WSKPIIPEITNGYGYLDLAYRT-PGEI-WAGGGNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPE-KGFVL 319 (334)
T ss_pred CCc-cccccCCccccccceeeEEEcC-CCCE-EEEcCCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCC-ceEEE
Confidence 211 111111 224578889987 6554 4455677554 3444455444432 222357788888776 56665
Q ss_pred EeCCCcEEEEeC
Q 046451 326 SSFDGKIGIYNI 337 (719)
Q Consensus 326 ~s~Dg~I~iwd~ 337 (719)
| ..|.|..|+-
T Consensus 320 G-~~G~il~~~~ 330 (334)
T PRK13684 320 G-QRGVLLRYVG 330 (334)
T ss_pred C-CCceEEEecC
Confidence 5 4788877763
No 414
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=95.82 E-value=4.4 Score=48.19 Aligned_cols=117 Identities=20% Similarity=0.254 Sum_probs=75.5
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC----ceeEEecCCCC----------CceeEEEECCCCCcEEEEEeCC
Q 046451 174 GEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ----KPVISFSESIK----------RRCSVLQWNPDVATQLVVASDE 239 (719)
Q Consensus 174 ~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~----~~~~~~~~~~~----------~~i~~l~~sp~g~~~l~~~s~d 239 (719)
....+++|+|.....||+....|...|||+... .....+..... ..-..|.|..+.. .|+++...
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~-~lLv~~r~ 224 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSN-RLLVCNRS 224 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCC-EEEEEcCC
Confidence 367799999988889999999999999999211 11111111111 2234788987764 56666665
Q ss_pred CCCCcEEEEecCCCCCce-EEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC
Q 046451 240 DSSPALRLWDMRNTMSPV-KEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 240 ~~~~~I~lwDl~~~~~~~-~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~ 296 (719)
.+.++|+++..... .........|.++.-++.+..+++.-+. ..|...|+..
T Consensus 225 ----~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLTs-~eiiw~~~~~ 277 (765)
T PF10214_consen 225 ----KLMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILTS-KEIIWLDVKS 277 (765)
T ss_pred ----ceEEEECCCCCccchhccCCChhheeeEEecCCccceEEEEec-CeEEEEEccC
Confidence 59999998754311 2223355789999988844445444433 5677778766
No 415
>KOG3671 consensus Actin regulatory protein (Wiskott-Aldrich syndrome protein) [Signal transduction mechanisms; Cytoskeleton]
Probab=95.79 E-value=0.31 Score=51.99 Aligned_cols=8 Identities=13% Similarity=0.235 Sum_probs=4.5
Q ss_pred HHHHHHHH
Q 046451 619 TRLFNETS 626 (719)
Q Consensus 619 ~~~~~~~~ 626 (719)
..+|..++
T Consensus 496 ~~LmaqIR 503 (569)
T KOG3671|consen 496 DALMAQIR 503 (569)
T ss_pred HHHHHHHH
Confidence 35566666
No 416
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=95.75 E-value=0.79 Score=44.48 Aligned_cols=112 Identities=14% Similarity=0.083 Sum_probs=68.7
Q ss_pred CCEEEEEEeCCCCCEEEEEeCCCcEEEEc--CCCCCCCC--ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEE
Q 046451 124 GPVRGLEFNSFTPNLLASGADDGEICIWD--LSAPAEPS--HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTV 199 (719)
Q Consensus 124 ~~V~~l~fsp~~~~~lasgs~dg~I~iwd--l~~~~~~~--~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~ 199 (719)
+.-+.|+|+.+...+.++-+.+-+|.-|| ..++.... .+..++.......-.--.+++.-+| ++++++-..++|.
T Consensus 158 ~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG-~L~Va~~ng~~V~ 236 (310)
T KOG4499|consen 158 GISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEG-NLYVATFNGGTVQ 236 (310)
T ss_pred cCCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCC-cEEEEEecCcEEE
Confidence 34467889874445566677788887787 44443211 1111211110011112234445565 6888888889999
Q ss_pred EEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEe
Q 046451 200 VWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVAS 237 (719)
Q Consensus 200 iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s 237 (719)
.+|..+++.+.++. -....|++++|--.+-.++++..
T Consensus 237 ~~dp~tGK~L~eik-lPt~qitsccFgGkn~d~~yvT~ 273 (310)
T KOG4499|consen 237 KVDPTTGKILLEIK-LPTPQITSCCFGGKNLDILYVTT 273 (310)
T ss_pred EECCCCCcEEEEEE-cCCCceEEEEecCCCccEEEEEe
Confidence 99999999999998 56889999999755323444333
No 417
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=95.66 E-value=0.22 Score=54.46 Aligned_cols=158 Identities=16% Similarity=0.237 Sum_probs=88.4
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEc--CCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC---CCE
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGL--VDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT---PNL 138 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs--~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~---~~~ 138 (719)
-..|..++|.. |+ +++.+.- .+|.+++=|- ..+.. -+.|..+.|.|.. .-.
T Consensus 19 iHPvhGlaWTD-Gk-------qVvLT~L~l~~gE~kfGds------------~viGq----FEhV~GlsW~P~~~~~~pa 74 (671)
T PF15390_consen 19 IHPVHGLAWTD-GK-------QVVLTDLQLHNGEPKFGDS------------KVIGQ----FEHVHGLSWAPPCTADTPA 74 (671)
T ss_pred hccccceEecC-CC-------EEEEEeeeeeCCccccCCc------------cEeec----cceeeeeeecCcccCCCCc
Confidence 35678899964 42 5565542 2333333222 33333 3468899998742 223
Q ss_pred EEEEeCCCcEEEEcCCCCCCCC-ccCCccCCCCCCC----CCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec
Q 046451 139 LASGADDGEICIWDLSAPAEPS-HFPPLRGNGSAAQ----GEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS 213 (719)
Q Consensus 139 lasgs~dg~I~iwdl~~~~~~~-~~~~l~~~~~~h~----~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~ 213 (719)
|+.......|.||-+.-..... ++ +........ ---..+.|+|+.. +|++-.....-.+++++.........
T Consensus 75 LLAVQHkkhVtVWqL~~s~~e~~K~--l~sQtcEi~e~~pvLpQGCVWHPk~~-iL~VLT~~dvSV~~sV~~d~srVkaD 151 (671)
T PF15390_consen 75 LLAVQHKKHVTVWQLCPSTTERNKL--LMSQTCEIREPFPVLPQGCVWHPKKA-ILTVLTARDVSVLPSVHCDSSRVKAD 151 (671)
T ss_pred eEEEeccceEEEEEeccCccccccc--eeeeeeeccCCcccCCCcccccCCCc-eEEEEecCceeEeeeeeeCCceEEEe
Confidence 4445566899999886221100 00 100000000 0123567999964 66655555444566666544333333
Q ss_pred CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecC
Q 046451 214 ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR 251 (719)
Q Consensus 214 ~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~ 251 (719)
....+.|.|.+|..||.+++++.+..- .-++||-.
T Consensus 152 i~~~G~IhCACWT~DG~RLVVAvGSsL---HSyiWd~~ 186 (671)
T PF15390_consen 152 IKTSGLIHCACWTKDGQRLVVAVGSSL---HSYIWDSA 186 (671)
T ss_pred ccCCceEEEEEecCcCCEEEEEeCCeE---EEEEecCc
Confidence 348899999999999977666555543 57888853
No 418
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=95.64 E-value=1.9 Score=45.76 Aligned_cols=76 Identities=18% Similarity=0.143 Sum_probs=43.3
Q ss_pred ceEEeeCCCCCeeEEEeCCC------CCCeEEEEeCCCcEEEEECCCCeEEE---E-ecCCCCCeEEeEEcCCCCCEEEE
Q 046451 256 PVKEFVGHTKGVIAMSWCPN------DSSYLLTCAKDNRTICWDTVSGEIVS---E-LPAGTNWNFDIHWYPKIPGVISA 325 (719)
Q Consensus 256 ~~~~~~~h~~~V~~v~~sp~------d~~~l~sgs~Dg~I~iwd~~~~~~~~---~-l~~h~~~v~~l~~spdg~~~las 325 (719)
++..+..| ..+..+.|... .+.+|++.-..+.|...++..+..+. + +......+.+|++.+|| .++++
T Consensus 245 P~~~~~~~-~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG-~Lyv~ 322 (331)
T PF07995_consen 245 PVFAYPPH-SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDG-ALYVS 322 (331)
T ss_dssp -SEEETTT---EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTS-EEEEE
T ss_pred cceeecCc-cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCC-eEEEE
Confidence 34444434 56677777641 23455555556678877776553222 2 22344479999999999 67777
Q ss_pred EeCCCcEE
Q 046451 326 SSFDGKIG 333 (719)
Q Consensus 326 ~s~Dg~I~ 333 (719)
.+.+|.|.
T Consensus 323 ~d~~G~iy 330 (331)
T PF07995_consen 323 DDSDGKIY 330 (331)
T ss_dssp E-TTTTEE
T ss_pred ECCCCeEe
Confidence 77788774
No 419
>KOG3671 consensus Actin regulatory protein (Wiskott-Aldrich syndrome protein) [Signal transduction mechanisms; Cytoskeleton]
Probab=95.63 E-value=1.7 Score=46.55 Aligned_cols=10 Identities=10% Similarity=0.185 Sum_probs=4.5
Q ss_pred EEEEcCCCCC
Q 046451 148 ICIWDLSAPA 157 (719)
Q Consensus 148 I~iwdl~~~~ 157 (719)
++|||+..++
T Consensus 79 lrl~di~~~r 88 (569)
T KOG3671|consen 79 LRLVDIVNNR 88 (569)
T ss_pred eEEeeecCce
Confidence 4444444443
No 420
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=95.62 E-value=0.0018 Score=68.29 Aligned_cols=149 Identities=12% Similarity=0.245 Sum_probs=106.7
Q ss_pred eEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC
Q 046451 176 ISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS 255 (719)
Q Consensus 176 I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~ 255 (719)
-....|-+.+.+ ++.++.+-.+..||-. ++.+.... ..+....++|+.+++..++.+...+ .+.+||+.+...
T Consensus 37 pi~~~w~~e~~n-lavaca~tiv~~YD~a-gq~~le~n--~tg~aldm~wDkegdvlavlAek~~---piylwd~n~eyt 109 (615)
T KOG2247|consen 37 PIIHRWRPEGHN-LAVACANTIVIYYDKA-GQVILELN--PTGKALDMAWDKEGDVLAVLAEKTG---PIYLWDVNSEYT 109 (615)
T ss_pred cceeeEecCCCc-eehhhhhhHHHhhhhh-cceecccC--CchhHhhhhhccccchhhhhhhcCC---CeeechhhhhhH
Confidence 335567777655 6777777888888854 45544444 5667778999999987777777766 899999976432
Q ss_pred ceEEeeC-CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEE
Q 046451 256 PVKEFVG-HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGI 334 (719)
Q Consensus 256 ~~~~~~~-h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~i 334 (719)
...++.+ |.... +.|++ +...++.+...|.+.|++-.+.+.+.....|...+++++|...+ +.+.++.|..+.+
T Consensus 110 qqLE~gg~~s~sl--l~wsK-g~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd--~vil~dcd~~L~v 184 (615)
T KOG2247|consen 110 QQLESGGTSSKSL--LAWSK-GTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLED--YVILCDCDNTLSV 184 (615)
T ss_pred HHHhccCcchHHH--Hhhcc-CCccccccccccceEEEeccchhhhhhhcccccceeEEEecccc--eeeecCcHHHHHH
Confidence 2222222 22222 78998 88889999999999999998877777665588999999999987 5666666655444
Q ss_pred Ee
Q 046451 335 YN 336 (719)
Q Consensus 335 wd 336 (719)
-.
T Consensus 185 ~~ 186 (615)
T KOG2247|consen 185 TT 186 (615)
T ss_pred hh
Confidence 33
No 421
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=95.59 E-value=1.9 Score=45.54 Aligned_cols=186 Identities=15% Similarity=0.156 Sum_probs=92.9
Q ss_pred cEEEEEeCC-----CcEEEEECCCCce---eEEecCC-CCCceeEEEECCCCCcEEEEEeCCC--CCCcEEEEecCCCC-
Q 046451 187 HILASTSYN-----GTTVVWDLKKQKP---VISFSES-IKRRCSVLQWNPDVATQLVVASDED--SSPALRLWDMRNTM- 254 (719)
Q Consensus 187 ~~l~s~s~d-----g~I~iwd~~~~~~---~~~~~~~-~~~~i~~l~~sp~g~~~l~~~s~d~--~~~~I~lwDl~~~~- 254 (719)
.+++.|+.+ ..+..+|+.+.+. ...+... ....-.+++.. ++ .+++.|+..+ ....+..||+++..
T Consensus 74 ~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~-~~-~iYv~GG~~~~~~~~~v~~yd~~~~~W 151 (323)
T TIGR03548 74 GIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYK-DG-TLYVGGGNRNGKPSNKSYLFNLETQEW 151 (323)
T ss_pred EEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEE-CC-EEEEEeCcCCCccCceEEEEcCCCCCe
Confidence 477777754 3577778776553 1222211 11111222222 33 5677776422 12368889987542
Q ss_pred CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCC----cEEEEECCCCeEEEEecCC---CC-----CeEEeEEcCCCCCE
Q 046451 255 SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDN----RTICWDTVSGEIVSELPAG---TN-----WNFDIHWYPKIPGV 322 (719)
Q Consensus 255 ~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg----~I~iwd~~~~~~~~~l~~h---~~-----~v~~l~~spdg~~~ 322 (719)
+.+..+... ......+..- ++++++.|+.++ .+.+||..+.+-.. +... .. ....+.. .++ .+
T Consensus 152 ~~~~~~p~~-~r~~~~~~~~-~~~iYv~GG~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~p~~~~~~~~~~~-~~~-~i 226 (323)
T TIGR03548 152 FELPDFPGE-PRVQPVCVKL-QNELYVFGGGSNIAYTDGYKYSPKKNQWQK-VADPTTDSEPISLLGAASIKI-NES-LL 226 (323)
T ss_pred eECCCCCCC-CCCcceEEEE-CCEEEEEcCCCCccccceEEEecCCCeeEE-CCCCCCCCCceeccceeEEEE-CCC-EE
Confidence 111112111 1111122222 567777887664 35688887654322 2110 00 1112222 234 68
Q ss_pred EEEEeCC-------------------------------------CcEEEEeCCCCcccccCCCCCCCCCccCcceecCCC
Q 046451 323 ISASSFD-------------------------------------GKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPA 365 (719)
Q Consensus 323 las~s~D-------------------------------------g~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~ 365 (719)
++.|+.+ ..|.+||+.+.+.....+.. ...+..
T Consensus 227 yv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p----------~~~r~~ 296 (323)
T TIGR03548 227 LCIGGFNKDVYNDAVIDLATMKDESLKGYKKEYFLKPPEWYNWNRKILIYNVRTGKWKSIGNSP----------FFARCG 296 (323)
T ss_pred EEECCcCHHHHHHHHhhhhhccchhhhhhHHHHhCCCccccCcCceEEEEECCCCeeeEccccc----------ccccCc
Confidence 8888876 34778888777654422111 011222
Q ss_pred ceeeeeCCcEEEEccCCCCCcccc
Q 046451 366 GASFGFGGKLVSFHPKSSAGHTSE 389 (719)
Q Consensus 366 ~~s~s~~Gklv~~~~~~~~~~~~~ 389 (719)
......+++|++++.....+.|+-
T Consensus 297 ~~~~~~~~~iyv~GG~~~pg~rt~ 320 (323)
T TIGR03548 297 AALLLTGNNIFSINGELKPGVRTP 320 (323)
T ss_pred hheEEECCEEEEEeccccCCcCCc
Confidence 235677899999998777777653
No 422
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.55 E-value=0.092 Score=61.18 Aligned_cols=147 Identities=16% Similarity=0.084 Sum_probs=87.8
Q ss_pred cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcc---ccee---ecccCCCCCceeeeecCCCCCCCCCc
Q 046451 10 SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDR---DLLL---VGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 10 V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~---~~~~---~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
|..+..++|+...++... +++..|..||+..-.... ...+ ...+....-..++.|+|.-.
T Consensus 103 i~~~v~~~D~t~s~v~~t--------sng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp------ 168 (1405)
T KOG3630|consen 103 IVIFVCFHDATDSVVVST--------SNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVP------ 168 (1405)
T ss_pred ceEEEeccCCceEEEEEe--------cCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCcc------
Confidence 445556666665554322 123345778876443322 1111 11223344566889999754
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
...+.+..|+.|++..+.... ..... ......+++++|++ .+..++.|-..|++.-|...-. ....+.
T Consensus 169 -~n~av~l~dlsl~V~~~~~~~--------~~v~s-~p~t~~~Tav~WSp-rGKQl~iG~nnGt~vQy~P~le-ik~~ip 236 (1405)
T KOG3630|consen 169 -LNSAVDLSDLSLRVKSTKQLA--------QNVTS-FPVTNSQTAVLWSP-RGKQLFIGRNNGTEVQYEPSLE-IKSEIP 236 (1405)
T ss_pred -chhhhhccccchhhhhhhhhh--------hhhcc-cCcccceeeEEecc-ccceeeEecCCCeEEEeecccc-eeeccc
Confidence 567778889999998874211 11112 22456789999999 8899999999999998875433 222221
Q ss_pred CccCCCCCCCCCeEEEEecCCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKV 185 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g 185 (719)
.... .....|.+|+|...-
T Consensus 237 ~Pp~---~e~yrvl~v~Wl~t~ 255 (1405)
T KOG3630|consen 237 EPPV---EENYRVLSVTWLSTQ 255 (1405)
T ss_pred CCCc---CCCcceeEEEEecce
Confidence 1111 114589999998774
No 423
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=95.51 E-value=1.7 Score=44.00 Aligned_cols=158 Identities=13% Similarity=0.136 Sum_probs=88.8
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEe-cCCC
Q 046451 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWD-MRNT 253 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwD-l~~~ 253 (719)
.+.+.++++++..+.++...++.-.||-...+....... ....+..-.|++++ .++++...+. ..+++. ....
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~--~g~~l~~PS~d~~g-~~W~v~~~~~---~~~~~~~~~~g 98 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVL--TGGSLTRPSWDPDG-WVWTVDDGSG---GVRVVRDSASG 98 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeec--cCCccccccccCCC-CEEEEEcCCC---ceEEEEecCCC
Confidence 688999999986555555334444444444444444433 34478888999996 4555544444 455553 2222
Q ss_pred CCceEEeeCC--CCCeeEEEeCCCCCCeEEEEe---CCCcEEEEECC---CC------eEEEEecCCCCCeEEeEEcCCC
Q 046451 254 MSPVKEFVGH--TKGVIAMSWCPNDSSYLLTCA---KDNRTICWDTV---SG------EIVSELPAGTNWNFDIHWYPKI 319 (719)
Q Consensus 254 ~~~~~~~~~h--~~~V~~v~~sp~d~~~l~sgs---~Dg~I~iwd~~---~~------~~~~~l~~h~~~v~~l~~spdg 319 (719)
......+... ...|..+.+|+ ||..++.-. .+++|.|--+. .+ ..+.........+.++.|..++
T Consensus 99 ~~~~~~v~~~~~~~~I~~l~vSp-DG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~ 177 (253)
T PF10647_consen 99 TGEPVEVDWPGLRGRITALRVSP-DGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDS 177 (253)
T ss_pred cceeEEecccccCCceEEEEECC-CCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCC
Confidence 2222222211 12899999999 887766554 35667666433 23 1122222334578999999998
Q ss_pred CCEEEEEeC-CCcEEE-EeCCCC
Q 046451 320 PGVISASSF-DGKIGI-YNIEGC 340 (719)
Q Consensus 320 ~~~las~s~-Dg~I~i-wd~~~~ 340 (719)
.+++.+.. ++.+.. ..+..+
T Consensus 178 -~L~V~~~~~~~~~~~~v~~dG~ 199 (253)
T PF10647_consen 178 -TLVVLGRSAGGPVVRLVSVDGG 199 (253)
T ss_pred -EEEEEeCCCCCceeEEEEccCC
Confidence 45555443 443444 444443
No 424
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=95.50 E-value=1 Score=45.75 Aligned_cols=161 Identities=12% Similarity=0.048 Sum_probs=89.0
Q ss_pred CceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEE-CCC
Q 046451 218 RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD-TVS 296 (719)
Q Consensus 218 ~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd-~~~ 296 (719)
..+.+.++++++..+.++...++ ...|+++.... .....+.+ ..+..-.|++ ++.+.+....+...+++. ..+
T Consensus 24 ~~~~s~AvS~dg~~~A~v~~~~~-~~~L~~~~~~~--~~~~~~~g--~~l~~PS~d~-~g~~W~v~~~~~~~~~~~~~~~ 97 (253)
T PF10647_consen 24 YDVTSPAVSPDGSRVAAVSEGDG-GRSLYVGPAGG--PVRPVLTG--GSLTRPSWDP-DGWVWTVDDGSGGVRVVRDSAS 97 (253)
T ss_pred ccccceEECCCCCeEEEEEEcCC-CCEEEEEcCCC--cceeeccC--CccccccccC-CCCEEEEEcCCCceEEEEecCC
Confidence 36889999999975555552222 12566665543 22222232 3778889999 666666666666666663 333
Q ss_pred CeE-EEEecCC--CCCeEEeEEcCCCCCEEEEE--eCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeee
Q 046451 297 GEI-VSELPAG--TNWNFDIHWYPKIPGVISAS--SFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGF 371 (719)
Q Consensus 297 ~~~-~~~l~~h--~~~v~~l~~spdg~~~las~--s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~ 371 (719)
++. ...+... ...|..+.+|+||.++.+.. ..++.|.|--+.....-. ...+.........-......+.|..
T Consensus 98 g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~--~~~l~~~~~~~~~~~~~v~~v~W~~ 175 (253)
T PF10647_consen 98 GTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGV--PRRLTGPRRVAPPLLSDVTDVAWSD 175 (253)
T ss_pred CcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCC--cceeccceEecccccCcceeeeecC
Confidence 322 1222221 12799999999996555444 235777776654322210 0000000000101122345789999
Q ss_pred CCcEEEEccCCCCCc
Q 046451 372 GGKLVSFHPKSSAGH 386 (719)
Q Consensus 372 ~Gklv~~~~~~~~~~ 386 (719)
++.|+.+........
T Consensus 176 ~~~L~V~~~~~~~~~ 190 (253)
T PF10647_consen 176 DSTLVVLGRSAGGPV 190 (253)
T ss_pred CCEEEEEeCCCCCce
Confidence 999988887666533
No 425
>KOG4849 consensus mRNA cleavage factor I subunit/CPSF subunit [RNA processing and modification]
Probab=95.21 E-value=0.9 Score=46.09 Aligned_cols=24 Identities=4% Similarity=0.130 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHhcCChhHHHhhee
Q 046451 666 ADKLVQLCQALDNNDFGTALQIQV 689 (719)
Q Consensus 666 ~~~l~~l~~~~~~~~~~~a~~i~~ 689 (719)
+..|...-.-|+++.|.-.++-|+
T Consensus 418 issL~dcLhgiesksys~g~kr~r 441 (498)
T KOG4849|consen 418 ISSLEDCLHGIESKSYSLGNKRHR 441 (498)
T ss_pred HHHHHHHHhhhhcccccccccccc
Confidence 333333333445555554444444
No 426
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=95.20 E-value=4.2 Score=41.45 Aligned_cols=218 Identities=13% Similarity=0.129 Sum_probs=118.3
Q ss_pred CEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC-----CCccCCccC-CCCCCCCCeEEEEecCCCC-----------c
Q 046451 125 PVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE-----PSHFPPLRG-NGSAAQGEISFVSWNSKVQ-----------H 187 (719)
Q Consensus 125 ~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~-----~~~~~~l~~-~~~~h~~~I~~l~~sp~g~-----------~ 187 (719)
.-+.|+|+| .+.+-++...-+...+||...... ...+. +.. .........+.+.|+.... .
T Consensus 24 N~WGia~~p-~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vt-iP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a 101 (336)
T TIGR03118 24 NAWGLSYRP-GGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVV-IPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPS 101 (336)
T ss_pred ccceeEecC-CCCEEEecCCcceEEeecCCcccccCCccceEEE-ecCCCCCCCCCCccEEEEeCCCceEEcCCCcccce
Confidence 447899999 667777777778999999872211 10110 110 1111234567777764321 2
Q ss_pred EEEEEeCCCcEEEEECCCCc-----eeEEecCCC-CCceeEEEECCC--CCcEEEEEeCCCCCCcEEEEecCCCCCceEE
Q 046451 188 ILASTSYNGTTVVWDLKKQK-----PVISFSESI-KRRCSVLQWNPD--VATQLVVASDEDSSPALRLWDMRNTMSPVKE 259 (719)
Q Consensus 188 ~l~s~s~dg~I~iwd~~~~~-----~~~~~~~~~-~~~i~~l~~sp~--g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~ 259 (719)
.++.+++||+|.-|.-.-.. ....+.... ......+++... +..++++--..+ +|.+||-.-. ++..
T Consensus 102 ~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g---~IDVFd~~f~--~~~~ 176 (336)
T TIGR03118 102 RFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQG---RIDVFKGSFR--PPPL 176 (336)
T ss_pred eEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCC---ceEEecCccc--cccC
Confidence 36778999999999853221 122233222 223344555533 333444444333 8999985421 1110
Q ss_pred ---eeCCC-------CCeeE------EEe---CCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC--CCCCeEEeEEcCC
Q 046451 260 ---FVGHT-------KGVIA------MSW---CPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA--GTNWNFDIHWYPK 318 (719)
Q Consensus 260 ---~~~h~-------~~V~~------v~~---sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~--h~~~v~~l~~spd 318 (719)
+.... -.|.. |.| .+ +++.=+.+..-|.|-+||+ .|+.++++.. .-+.-+.|+..|.
T Consensus 177 ~g~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~-~~~d~v~G~G~G~VdvFd~-~G~l~~r~as~g~LNaPWG~a~APa 254 (336)
T TIGR03118 177 PGSFIDPALPAGYAPFNVQNLGGTLYVTYAQQDA-DRNDEVAGAGLGYVNVFTL-NGQLLRRVASSGRLNAPWGLAIAPE 254 (336)
T ss_pred CCCccCCCCCCCCCCcceEEECCeEEEEEEecCC-cccccccCCCcceEEEEcC-CCcEEEEeccCCcccCCceeeeChh
Confidence 11000 01111 111 11 1112222334478999998 7888887742 3345677777552
Q ss_pred -----CCCEEEEEeCCCcEEEEeCCCCcccccCCCCCC
Q 046451 319 -----IPGVISASSFDGKIGIYNIEGCSRYGVGDSNFS 351 (719)
Q Consensus 319 -----g~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~ 351 (719)
...+|+---.||+|..||..+++.+.......+
T Consensus 255 ~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G 292 (336)
T TIGR03118 255 SFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDN 292 (336)
T ss_pred hhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCC
Confidence 125777777799999999998887764444433
No 427
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.06 E-value=0.29 Score=57.23 Aligned_cols=144 Identities=18% Similarity=0.230 Sum_probs=90.0
Q ss_pred CeEEEEecCCCCcEEEE-EeCCCcEEEEECCCCceeE--------EecC--CCCCceeEEEECCCCCcEEEEEeCCCCCC
Q 046451 175 EISFVSWNSKVQHILAS-TSYNGTTVVWDLKKQKPVI--------SFSE--SIKRRCSVLQWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s-~s~dg~I~iwd~~~~~~~~--------~~~~--~~~~~i~~l~~sp~g~~~l~~~s~d~~~~ 243 (719)
.|..+...+|+....+. .+.+-.|+.||+++-.... .... .......++.|+|.-....+++..|.
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dl--- 178 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDL--- 178 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhcccc---
Confidence 44445555554322222 3334478899997632211 1000 12344567889988766677777776
Q ss_pred cEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC----CCCCeEEeEEcCCC
Q 046451 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA----GTNWNFDIHWYPKI 319 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~----h~~~v~~l~~spdg 319 (719)
.|++..+......+..+ ......++++|++ .|+.+++|-..|++.-|.. +++...++.. ....|.+|+|-...
T Consensus 179 sl~V~~~~~~~~~v~s~-p~t~~~Tav~WSp-rGKQl~iG~nnGt~vQy~P-~leik~~ip~Pp~~e~yrvl~v~Wl~t~ 255 (1405)
T KOG3630|consen 179 SLRVKSTKQLAQNVTSF-PVTNSQTAVLWSP-RGKQLFIGRNNGTEVQYEP-SLEIKSEIPEPPVEENYRVLSVTWLSTQ 255 (1405)
T ss_pred chhhhhhhhhhhhhccc-CcccceeeEEecc-ccceeeEecCCCeEEEeec-ccceeecccCCCcCCCcceeEEEEecce
Confidence 78887765332222222 2345789999999 9999999999999999976 5555555443 23579999999887
Q ss_pred CCEEEE
Q 046451 320 PGVISA 325 (719)
Q Consensus 320 ~~~las 325 (719)
.+|++
T Consensus 256 -eflvv 260 (1405)
T KOG3630|consen 256 -EFLVV 260 (1405)
T ss_pred -eEEEE
Confidence 34444
No 428
>PHA03098 kelch-like protein; Provisional
Probab=94.97 E-value=0.94 Score=51.58 Aligned_cols=193 Identities=9% Similarity=0.030 Sum_probs=91.9
Q ss_pred CCCEEEEEeCCC------cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC-----CcEEEEEC
Q 046451 135 TPNLLASGADDG------EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN-----GTTVVWDL 203 (719)
Q Consensus 135 ~~~~lasgs~dg------~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d-----g~I~iwd~ 203 (719)
++.+++.|+.++ .+..||..+.+. ..+..+.. .......+.+ + +.+++.|+.+ ..+..||.
T Consensus 294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W-~~~~~~~~----~R~~~~~~~~--~-~~lyv~GG~~~~~~~~~v~~yd~ 365 (534)
T PHA03098 294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSW-NKVPELIY----PRKNPGVTVF--N-NRIYVIGGIYNSISLNTVESWKP 365 (534)
T ss_pred CCEEEEECCCcCCCCeeccEEEEeCCCCee-eECCCCCc----ccccceEEEE--C-CEEEEEeCCCCCEecceEEEEcC
Confidence 456777776543 577888876553 22222221 1112223333 3 3577777765 35778888
Q ss_pred CCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCC---CCcEEEEecCCCC-CceEEeeCCCCCeeEEEeCCCCCCe
Q 046451 204 KKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS---SPALRLWDMRNTM-SPVKEFVGHTKGVIAMSWCPNDSSY 279 (719)
Q Consensus 204 ~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~---~~~I~lwDl~~~~-~~~~~~~~h~~~V~~v~~sp~d~~~ 279 (719)
.+++....-.......-.+++.. ++ .+++.|+.+.. ...+..||..+.. ..+..+....... +++.. ++.+
T Consensus 366 ~~~~W~~~~~lp~~r~~~~~~~~-~~-~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~-~~~~~--~~~i 440 (534)
T PHA03098 366 GESKWREEPPLIFPRYNPCVVNV-NN-LIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGG-CAIYH--DGKI 440 (534)
T ss_pred CCCceeeCCCcCcCCccceEEEE-CC-EEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCc-eEEEE--CCEE
Confidence 76643221110111111122222 33 57777764321 1368899987532 1111111111111 22222 5566
Q ss_pred EEEEeCC--------CcEEEEECCCCeEEEE--ecCCCCCeEEeEEcCCCCCEEEEEeCC-----CcEEEEeCCCCccc
Q 046451 280 LLTCAKD--------NRTICWDTVSGEIVSE--LPAGTNWNFDIHWYPKIPGVISASSFD-----GKIGIYNIEGCSRY 343 (719)
Q Consensus 280 l~sgs~D--------g~I~iwd~~~~~~~~~--l~~h~~~v~~l~~spdg~~~las~s~D-----g~I~iwd~~~~~~~ 343 (719)
++.||.+ ..+.+||..+++-... +.........+.+ ++ .+++.|+.+ +.|.+||.++.+..
T Consensus 441 yv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 516 (534)
T PHA03098 441 YVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIF--NN-KIYVVGGDKYEYYINEIEVYDDKTNTWT 516 (534)
T ss_pred EEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEE--CC-EEEEEcCCcCCcccceeEEEeCCCCEEE
Confidence 7777643 2388899876643221 2111111122222 44 577777654 46777877776543
No 429
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=94.96 E-value=0.48 Score=53.67 Aligned_cols=114 Identities=15% Similarity=0.214 Sum_probs=69.8
Q ss_pred ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCC-CCCCeEEEEeCCCcEEEEECC--
Q 046451 219 RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCP-NDSSYLLTCAKDNRTICWDTV-- 295 (719)
Q Consensus 219 ~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp-~d~~~l~sgs~Dg~I~iwd~~-- 295 (719)
...-+.-+.-+ +..++ ..++. .+.|||.+.........-...+.|.++.|.. .++..+++.|..+.|.+|--.
T Consensus 31 ~~~li~gss~~-k~a~V-~~~~~--~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~ 106 (631)
T PF12234_consen 31 NPSLISGSSIK-KIAVV-DSSRS--ELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRY 106 (631)
T ss_pred CcceEeecccC-cEEEE-ECCCC--EEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccch
Confidence 44445555544 23333 33332 8999999865321111113467899999973 277888888999999998431
Q ss_pred -------CCeEEEEe--cCCC-CCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 296 -------SGEIVSEL--PAGT-NWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 296 -------~~~~~~~l--~~h~-~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
+...+.++ ..++ ..|.+..|..+| .|+.|+ ++.+.|+|-.-
T Consensus 107 dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G--~LvV~s-GNqlfv~dk~~ 157 (631)
T PF12234_consen 107 DYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDG--TLVVGS-GNQLFVFDKWL 157 (631)
T ss_pred hhhcCCcccceeEEEEeecCCCCCccceeEecCC--eEEEEe-CCEEEEECCCc
Confidence 12233333 3344 468999999999 444444 46788887433
No 430
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=94.94 E-value=1.3 Score=47.77 Aligned_cols=152 Identities=12% Similarity=0.132 Sum_probs=96.3
Q ss_pred EEecCCCCcEE-EEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCC------cEEEEEeCCCCCCcEEEEecC
Q 046451 179 VSWNSKVQHIL-ASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVA------TQLVVASDEDSSPALRLWDMR 251 (719)
Q Consensus 179 l~~sp~g~~~l-~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~------~~l~~~s~d~~~~~I~lwDl~ 251 (719)
+-.+.+++.+| ..+.....++-.|++.|+.+.... .+ ..+ -+.|.|+.+ ..-++|-++. .|.-.|.|
T Consensus 472 ~mlh~~dssli~~dg~~~~kLykmDIErGkvveeW~-~~-ddv-vVqy~p~~kf~qmt~eqtlvGlS~~---svFrIDPR 545 (776)
T COG5167 472 IMLHDNDSSLIYLDGGERDKLYKMDIERGKVVEEWD-LK-DDV-VVQYNPYFKFQQMTDEQTLVGLSDY---SVFRIDPR 545 (776)
T ss_pred ceeecCCcceEEecCCCcccceeeecccceeeeEee-cC-Ccc-eeecCCchhHHhcCccceEEeeccc---ceEEeccc
Confidence 33333333444 445666788999999999999888 33 333 567777532 1234455554 57777876
Q ss_pred CCCCceEEeeCCCCCeeEEEeCC---CCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeC
Q 046451 252 NTMSPVKEFVGHTKGVIAMSWCP---NDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSF 328 (719)
Q Consensus 252 ~~~~~~~~~~~h~~~V~~v~~sp---~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~ 328 (719)
-....+.... ....++.-.|+. ....++++++..|-|++||.-.-+-...+.+....|..+..+.+|..+|+||
T Consensus 546 ~~gNKi~v~e-sKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTC-- 622 (776)
T COG5167 546 ARGNKIKVVE-SKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATC-- 622 (776)
T ss_pred ccCCceeeee-ehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEee--
Confidence 5443332222 223333334442 1456999999999999999754444455677778899999999996666666
Q ss_pred CCcEEEEeCCC
Q 046451 329 DGKIGIYNIEG 339 (719)
Q Consensus 329 Dg~I~iwd~~~ 339 (719)
...|.+-|+.-
T Consensus 623 k~yllL~d~~i 633 (776)
T COG5167 623 KNYLLLTDVPI 633 (776)
T ss_pred cceEEEEeccc
Confidence 35677766654
No 431
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=94.94 E-value=4.6 Score=45.98 Aligned_cols=115 Identities=14% Similarity=0.162 Sum_probs=62.5
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCC--cEEEEecCCCCCc-eEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSP--ALRLWDMRNTMSP-VKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~--~I~lwDl~~~~~~-~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~ 296 (719)
-..+.|-|.|+ .+++-..|+.+. .|.++.-.....- ...-.+....+..++|+- ....++ ....+.|.+|-..+
T Consensus 249 e~~LSWkpqgS-~~ati~td~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~-~s~vla-v~~~n~~~lwttkN 325 (1243)
T COG5290 249 EHQLSWKPQGS-KYATIGTDGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNL-LSTVLA-VAEGNLLKLWTTKN 325 (1243)
T ss_pred hhccccccCCc-eeeeeccCCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhH-HHHHHH-HhhcceEEEEEccc
Confidence 34589999995 566666555322 4555543211100 001122344566778875 444444 34567899998876
Q ss_pred CeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 297 GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 297 ~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
........-.-..+.-+.|+|...+.|.-.+ .+.|...++.
T Consensus 326 yhWYLK~e~~ip~~s~vkwhpe~~nTl~f~d-~~~I~~V~f~ 366 (1243)
T COG5290 326 YHWYLKVERQIPGISYVKWHPEEKNTLLFRD-GERILRVFFS 366 (1243)
T ss_pred eEEEEEEeecCCCcceeeeccccCcEEEEec-CCeEEEEEee
Confidence 5544333333345778899997755554444 3444444443
No 432
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.93 E-value=0.52 Score=44.87 Aligned_cols=181 Identities=17% Similarity=0.128 Sum_probs=103.9
Q ss_pred EEEEeCCCCCEEEEEeC--CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC
Q 046451 128 GLEFNSFTPNLLASGAD--DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK 205 (719)
Q Consensus 128 ~l~fsp~~~~~lasgs~--dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~ 205 (719)
.+.+. ++.++.+.+. ...|++||+.+++...... +.. .......|+.+ +..+....-.+|.-.++|.++
T Consensus 50 GL~~~--~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~-l~~-~~~FgEGit~~-----gd~~y~LTw~egvaf~~d~~t 120 (262)
T COG3823 50 GLEYL--DGHILESTGLYGFSKIRVSDLTTGQEIFSEK-LAP-DTVFGEGITKL-----GDYFYQLTWKEGVAFKYDADT 120 (262)
T ss_pred ceeee--CCEEEEeccccccceeEEEeccCceEEEEee-cCC-ccccccceeec-----cceEEEEEeccceeEEEChHH
Confidence 34443 4566666654 3579999999877653321 110 01111222221 223444455678888999999
Q ss_pred CceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCc---eEEeeCC-CCCeeEEEeCCCCCCeEE
Q 046451 206 QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSP---VKEFVGH-TKGVIAMSWCPNDSSYLL 281 (719)
Q Consensus 206 ~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~---~~~~~~h-~~~V~~v~~sp~d~~~l~ 281 (719)
.+++..+. ..+.-..++.. ++.++.+.+.+ +++.-|.++.... ..++.+. -..++.+.|- +|.+.+
T Consensus 121 ~~~lg~~~--y~GeGWgLt~d--~~~LimsdGsa----tL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V--dG~lyA 190 (262)
T COG3823 121 LEELGRFS--YEGEGWGLTSD--DKNLIMSDGSA----TLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV--DGELYA 190 (262)
T ss_pred hhhhcccc--cCCcceeeecC--CcceEeeCCce----EEEecCHHHhhhcceEEEEECCeecccccceeee--ccEEEE
Confidence 99888887 55555555544 44555555444 6777776543211 1122211 1234455665 566666
Q ss_pred EEeCCCcEEEEECCCCeEEEEec------------CCCCCeEEeEEcCCCCCEEEEEe
Q 046451 282 TCAKDNRTICWDTVSGEIVSELP------------AGTNWNFDIHWYPKIPGVISASS 327 (719)
Q Consensus 282 sgs~Dg~I~iwd~~~~~~~~~l~------------~h~~~v~~l~~spdg~~~las~s 327 (719)
-.=.+..|...|..+|+.+..++ .+.+-.+.+++.+++.+++++|-
T Consensus 191 NVw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTGK 248 (262)
T COG3823 191 NVWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITGK 248 (262)
T ss_pred eeeeecceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEecC
Confidence 55556667777777777665553 24456678999998867777763
No 433
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=94.81 E-value=5.9 Score=41.12 Aligned_cols=197 Identities=13% Similarity=0.169 Sum_probs=90.8
Q ss_pred CEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC
Q 046451 125 PVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK 204 (719)
Q Consensus 125 ~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~ 204 (719)
...+|.|.. .+.+++| ..+ +.+...+.++....+. +... ..+....+....++ .+...+..|.|+. ..+
T Consensus 63 ~l~~I~f~~--~~g~ivG-~~g-~ll~T~DgG~tW~~v~-l~~~---lpgs~~~i~~l~~~--~~~l~~~~G~iy~-T~D 131 (302)
T PF14870_consen 63 HLNSISFDG--NEGWIVG-EPG-LLLHTTDGGKTWERVP-LSSK---LPGSPFGITALGDG--SAELAGDRGAIYR-TTD 131 (302)
T ss_dssp EEEEEEEET--TEEEEEE-ETT-EEEEESSTTSS-EE-----TT----SS-EEEEEEEETT--EEEEEETT--EEE-ESS
T ss_pred eEEEEEecC--CceEEEc-CCc-eEEEecCCCCCcEEee-cCCC---CCCCeeEEEEcCCC--cEEEEcCCCcEEE-eCC
Confidence 356777754 3444444 444 4444445555544421 1110 11233344443442 3333445554433 223
Q ss_pred CCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe
Q 046451 205 KQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA 284 (719)
Q Consensus 205 ~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs 284 (719)
.++.-..+.......+..+..++||. +++++.... .+.-||--.. .-..........|.+|.|.+ ++.+.+++
T Consensus 132 gG~tW~~~~~~~~gs~~~~~r~~dG~-~vavs~~G~---~~~s~~~G~~-~w~~~~r~~~~riq~~gf~~-~~~lw~~~- 204 (302)
T PF14870_consen 132 GGKTWQAVVSETSGSINDITRSSDGR-YVAVSSRGN---FYSSWDPGQT-TWQPHNRNSSRRIQSMGFSP-DGNLWMLA- 204 (302)
T ss_dssp TTSSEEEEE-S----EEEEEE-TTS--EEEEETTSS---EEEEE-TT-S-S-EEEE--SSS-EEEEEE-T-TS-EEEEE-
T ss_pred CCCCeeEcccCCcceeEeEEECCCCc-EEEEECccc---EEEEecCCCc-cceEEccCccceehhceecC-CCCEEEEe-
Confidence 34433333324567788899999984 566665554 5667775321 11122223467899999999 76665544
Q ss_pred CCCcEEEEE-CCCCeEEEE----ecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 285 KDNRTICWD-TVSGEIVSE----LPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 285 ~Dg~I~iwd-~~~~~~~~~----l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
..|.|++=| ....+.... +....-.+.+++|.+++ .+.++|+ .|.| +...+.++.
T Consensus 205 ~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~-~~wa~gg-~G~l-~~S~DgGkt 264 (302)
T PF14870_consen 205 RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPN-EIWAVGG-SGTL-LVSTDGGKT 264 (302)
T ss_dssp TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS--EEEEES-TT-E-EEESSTTSS
T ss_pred CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCC-CEEEEeC-CccE-EEeCCCCcc
Confidence 888888887 233333222 11222348999999987 5777666 5543 345555544
No 434
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=94.78 E-value=6.2 Score=41.19 Aligned_cols=253 Identities=13% Similarity=0.075 Sum_probs=115.2
Q ss_pred cCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCc
Q 046451 16 APDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGS 95 (719)
Q Consensus 16 Spdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~ 95 (719)
.-++++|+.|+.+|.. +.+++... ..+ ....+...|+++.....-. -+++.++....
T Consensus 10 ~~~~~~lL~GTe~Gly-----------~~~~~~~~--~~~---~kl~~~~~v~q~~v~~~~~-------lLi~Lsgk~~~ 66 (302)
T smart00036 10 TCDGKWLLVGTEEGLY-----------VLNISDQP--GTL---EKLIGRRSVTQIWVLEENN-------VLLMISGKKPQ 66 (302)
T ss_pred ccCCcEEEEEeCCceE-----------EEEcccCC--CCe---EEecCcCceEEEEEEhhhC-------EEEEEeCCcce
Confidence 3345799999999964 33333211 111 1123466888998887652 34444544555
Q ss_pred EEEEcCCccccC-----CCC-CCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCC-
Q 046451 96 IDIWNPLSLISS-----GET-GGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGN- 168 (719)
Q Consensus 96 I~lwd~~~~~~~-----~~~-~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~- 168 (719)
++++++..+... ... ...+.......|......+.........++++....+|.++...... ..+..++..
T Consensus 67 L~~~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~tkGc~~~~v~~~~~~~~l~~A~~~~i~l~~~~~~~--~~f~~~k~~~ 144 (302)
T smart00036 67 LYSHPLSALVEKKEALGSARLVIRKNVLTKIPDTKGCHLCAVVNGKRSLFLCVALQSSVVLLQWYNPL--KKFKLFKSKF 144 (302)
T ss_pred EEEEEHHHhhhhhhccCCccccccccceEeCCcCCceEEEEEEcCCCcEEEEEEcCCeEEEEEccChh--hhhhhhcccc
Confidence 999998554420 000 00011112223444333334433122344555556677776543321 111111110
Q ss_pred --CCCCCCCeEEEEecCCC-CcEEEEEeCCCcEEEEECCC--Cce---eEEe-cCCCC-CceeEEEECCCCCcEEEEEeC
Q 046451 169 --GSAAQGEISFVSWNSKV-QHILASTSYNGTTVVWDLKK--QKP---VISF-SESIK-RRCSVLQWNPDVATQLVVASD 238 (719)
Q Consensus 169 --~~~h~~~I~~l~~sp~g-~~~l~s~s~dg~I~iwd~~~--~~~---~~~~-~~~~~-~~i~~l~~sp~g~~~l~~~s~ 238 (719)
..-....+..+..+.+. ...++.|+..+...++++.. ... ...+ ..... ..+....+. ++ .++.+.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~lcvG~~~~~~~~~~~~~~~~~~~d~sl~~~~~~~~~~p~~i~~l~-~~--e~Llc~~ 221 (302)
T smart00036 145 LFPLISPVPVFVELVSSSFERPGICIGSDKGGGDVVQFHESLVSKEDLSLPFLSEETSLKPISVVQVP-RD--EFLLCYD 221 (302)
T ss_pred cccCCCCccceEeeecccccceEEEEEEcCCCCeEEEEeecccccccccccccccccccCceEEEEEC-CC--eEEEEEC
Confidence 00001122222222221 23566666643344455432 110 0000 00111 233333343 32 3555555
Q ss_pred CCCCCcEEEEecCC-CCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC
Q 046451 239 EDSSPALRLWDMRN-TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA 305 (719)
Q Consensus 239 d~~~~~I~lwDl~~-~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~ 305 (719)
+ ...+.|... .......+. -.....++++.. .+|+.-+ ++.|.|+++.+++.++++..
T Consensus 222 ~----~~v~Vn~~G~~~~r~~~l~-w~~~p~~~~~~~---pyll~~~-~~~ievr~l~~~~l~q~i~~ 280 (302)
T smart00036 222 E----FGVFVNLYGKRRSRNPILH-WEFMPESFAYHS---PYLLAFH-DNGIEIRSIKTGELLQELAD 280 (302)
T ss_pred c----EEEEEeCCCCccccceEEE-cCCcccEEEEEC---CEEEEEc-CCcEEEEECCCCceEEEEec
Confidence 5 355556543 111111221 234556777753 4555554 55699999999999888864
No 435
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=94.75 E-value=0.07 Score=38.25 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=29.7
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcC
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNP 101 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~ 101 (719)
.......|.+++|+|.. ++||.++.+|.|.|+.+
T Consensus 7 ~k~l~~~v~~~~w~P~m--------dLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 7 EKNLPSRVSCMSWCPTM--------DLIALGTEDGEVLVYRL 40 (47)
T ss_pred ccCCCCcEEEEEECCCC--------CEEEEEECCCeEEEEEC
Confidence 34456679999999998 79999999999999997
No 436
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=94.68 E-value=2 Score=41.62 Aligned_cols=142 Identities=20% Similarity=0.312 Sum_probs=82.3
Q ss_pred EEEEEeCCCcEEEEECCC--CceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC---cEEEE---ecC-CCCCceE
Q 046451 188 ILASTSYNGTTVVWDLKK--QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP---ALRLW---DMR-NTMSPVK 258 (719)
Q Consensus 188 ~l~s~s~dg~I~iwd~~~--~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~---~I~lw---Dl~-~~~~~~~ 258 (719)
.|+.+...+.|.+|++.. .+.+.+|. .-+.|..+.++..|++ +++--.+.... .+|+| +.. ....+++
T Consensus 30 ~Lfva~~g~~Vev~~l~~~~~~~~~~F~--Tv~~V~~l~y~~~GDY-lvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~ 106 (215)
T PF14761_consen 30 ALFVAASGCKVEVYDLEQEECPLLCTFS--TVGRVLQLVYSEAGDY-LVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVR 106 (215)
T ss_pred eEEEEcCCCEEEEEEcccCCCceeEEEc--chhheeEEEeccccce-EEEEEeecCCccceEEEEEEEhhhhcccCCcEE
Confidence 444446677899999983 45566666 6688999999999975 44444333333 45664 332 1222222
Q ss_pred -EeeCC---------------------CCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE-E-----EEec-----C
Q 046451 259 -EFVGH---------------------TKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI-V-----SELP-----A 305 (719)
Q Consensus 259 -~~~~h---------------------~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~-~-----~~l~-----~ 305 (719)
.+-|| .....+++.++..|++|+.+ ++++.||.+..... . ..|. -
T Consensus 107 vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~--~~~l~lf~l~~~~~~~~~~~~lDFe~~l~~~ 184 (215)
T PF14761_consen 107 VRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC--GNKLVLFTLKYQTIQSEKFSFLDFERSLIDH 184 (215)
T ss_pred EEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEc--CCEEEEEEEEEEEEecccccEEechhhhhhe
Confidence 22222 24567888888777766644 56888997754332 1 1111 1
Q ss_pred CCC-CeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 306 GTN-WNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 306 h~~-~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
|.+ ....++|.. .++|..+ |-.++++.+.
T Consensus 185 ~~~~~p~~v~ic~---~yiA~~s-~~ev~Vlkl~ 214 (215)
T PF14761_consen 185 IDNFKPTQVAICE---GYIAVMS-DLEVLVLKLE 214 (215)
T ss_pred ecCceEEEEEEEe---eEEEEec-CCEEEEEEEe
Confidence 111 234555552 4666666 6677777664
No 437
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=94.64 E-value=7.8 Score=41.73 Aligned_cols=153 Identities=9% Similarity=0.041 Sum_probs=76.5
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEc-----------CCC-cEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEe
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGL-----------VDG-SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFN 132 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs-----------~dg-~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fs 132 (719)
.....|+|.++| +++++-. ..+ .|.+++-.+ .++ .......+.........++|.
T Consensus 14 ~~P~~ia~d~~G--------~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~d----gdG-~~d~~~vfa~~l~~p~Gi~~~ 80 (367)
T TIGR02604 14 RNPIAVCFDERG--------RLWVAEGITYSRPAGRQGPLGDRILILEDAD----GDG-KYDKSNVFAEELSMVTGLAVA 80 (367)
T ss_pred CCCceeeECCCC--------CEEEEeCCcCCCCCCCCCCCCCEEEEEEcCC----CCC-CcceeEEeecCCCCccceeEe
Confidence 445688999987 5555532 223 676665421 112 111223333334456889998
Q ss_pred CCCCCEEEEEeCCCcEEEEcCCCCCCC----Ccc-CCccCCCCCCCCCeEEEEecCCCCcEEEEEeC-------------
Q 046451 133 SFTPNLLASGADDGEICIWDLSAPAEP----SHF-PPLRGNGSAAQGEISFVSWNSKVQHILASTSY------------- 194 (719)
Q Consensus 133 p~~~~~lasgs~dg~I~iwdl~~~~~~----~~~-~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~------------- 194 (719)
+ ++ +++ ++.+..+++.|....... ..+ ..+......+......+.|.++|. +.++.+.
T Consensus 81 ~-~G-lyV-~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~-LYv~~G~~~~~~~~~~~~~~ 156 (367)
T TIGR02604 81 V-GG-VYV-ATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGW-LYFNHGNTLASKVTRPGTSD 156 (367)
T ss_pred c-CC-EEE-eCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCC-EEEecccCCCceeccCCCcc
Confidence 7 55 444 444443344455432211 111 111111011234577899999974 4444331
Q ss_pred ------CCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEe
Q 046451 195 ------NGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVAS 237 (719)
Q Consensus 195 ------dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s 237 (719)
.|.|.-+|..+++. ..+. ..-.....++|+++|. ++++-.
T Consensus 157 ~~~~~~~g~i~r~~pdg~~~-e~~a-~G~rnp~Gl~~d~~G~-l~~tdn 202 (367)
T TIGR02604 157 ESRQGLGGGLFRYNPDGGKL-RVVA-HGFQNPYGHSVDSWGD-VFFCDN 202 (367)
T ss_pred CcccccCceEEEEecCCCeE-EEEe-cCcCCCccceECCCCC-EEEEcc
Confidence 14455556554432 2333 2234456899999984 555443
No 438
>PHA03378 EBNA-3B; Provisional
Probab=94.24 E-value=2.1 Score=47.44 Aligned_cols=6 Identities=33% Similarity=0.595 Sum_probs=2.4
Q ss_pred HHHHHH
Q 046451 617 TLTRLF 622 (719)
Q Consensus 617 ~l~~~~ 622 (719)
+|.++|
T Consensus 824 ilrqll 829 (991)
T PHA03378 824 ILRQLL 829 (991)
T ss_pred HHHHHh
Confidence 344443
No 439
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=94.21 E-value=3.2 Score=44.17 Aligned_cols=190 Identities=13% Similarity=0.128 Sum_probs=104.8
Q ss_pred CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEec----CCCCc--EEEEEeCC---CcEEEEECCCC
Q 046451 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWN----SKVQH--ILASTSYN---GTTVVWDLKKQ 206 (719)
Q Consensus 136 ~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~s----p~g~~--~l~s~s~d---g~I~iwd~~~~ 206 (719)
..+|+....++-+.+||+.... +..+ . .+.++.+..- -.|+. ++++...+ .+|++|.+...
T Consensus 68 kSlIigTdK~~GL~VYdL~Gk~-lq~~---~------~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~ 137 (381)
T PF02333_consen 68 KSLIIGTDKKGGLYVYDLDGKE-LQSL---P------VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPD 137 (381)
T ss_dssp G-EEEEEETTTEEEEEETTS-E-EEEE----------SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETT
T ss_pred cceEEEEeCCCCEEEEcCCCcE-EEee---c------CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCC
Confidence 4577778888899999998543 2221 1 1233333321 12222 23444433 46999977632
Q ss_pred -ceeEEecC------CCCCceeEEEE--CC-CCCcEEEEEeCCCCCCcEEEEecCCCC------CceEEeeCCCCCeeEE
Q 046451 207 -KPVISFSE------SIKRRCSVLQW--NP-DVATQLVVASDEDSSPALRLWDMRNTM------SPVKEFVGHTKGVIAM 270 (719)
Q Consensus 207 -~~~~~~~~------~~~~~i~~l~~--sp-~g~~~l~~~s~d~~~~~I~lwDl~~~~------~~~~~~~~h~~~V~~v 270 (719)
..+..+.. .....+..+|+ ++ +|..++++...++ .+..|.+.... +.+++|... ..+..|
T Consensus 138 ~g~L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G---~~~Qy~L~~~~~g~v~~~lVR~f~~~-sQ~EGC 213 (381)
T PF02333_consen 138 TGELTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDG---RVEQYELTDDGDGKVSATLVREFKVG-SQPEGC 213 (381)
T ss_dssp TTEEEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTS---EEEEEEEEE-TTSSEEEEEEEEEE-S-S-EEEE
T ss_pred CCcceEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCc---eEEEEEEEeCCCCcEeeEEEEEecCC-CcceEE
Confidence 22333221 12234667776 33 4555666666666 77777774221 245666543 467788
Q ss_pred EeCCCCCCeEEEEeCCCcEEEEECC-----CCeEEEEecC--CCCCeEEeEEcC--CCC-CEEEEEeCCCcEEEEeCCCC
Q 046451 271 SWCPNDSSYLLTCAKDNRTICWDTV-----SGEIVSELPA--GTNWNFDIHWYP--KIP-GVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 271 ~~sp~d~~~l~sgs~Dg~I~iwd~~-----~~~~~~~l~~--h~~~v~~l~~sp--dg~-~~las~s~Dg~I~iwd~~~~ 340 (719)
.... ...+|+.+-+|.-|.-|+.+ .++.+....+ ....|..|++.. ++. ++|+|.-.+++..||+.+..
T Consensus 214 VVDD-e~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~ 292 (381)
T PF02333_consen 214 VVDD-ETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGP 292 (381)
T ss_dssp EEET-TTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT
T ss_pred EEec-ccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCC
Confidence 8876 67789999999888888775 2334444333 334677887753 332 56667667889999998864
No 440
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=94.21 E-value=0.16 Score=36.42 Aligned_cols=33 Identities=18% Similarity=0.414 Sum_probs=28.9
Q ss_pred CCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 046451 307 TNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 307 ~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~ 340 (719)
...|..++|+|.. .+||.++.||.|.||+++..
T Consensus 11 ~~~v~~~~w~P~m-dLiA~~t~~g~v~v~Rl~~q 43 (47)
T PF12894_consen 11 PSRVSCMSWCPTM-DLIALGTEDGEVLVYRLNWQ 43 (47)
T ss_pred CCcEEEEEECCCC-CEEEEEECCCeEEEEECCCc
Confidence 3458999999999 79999999999999999443
No 441
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=94.12 E-value=2.2 Score=49.77 Aligned_cols=82 Identities=13% Similarity=0.190 Sum_probs=54.1
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCC----C-------ce--EEEEEeeccCCcccceeecccCCCCCceeeeecCC
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSS----S-------AN--LEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKN 75 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~----~-------~~--i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~ 75 (719)
.|..|.+|++|++||..+..|.+.+..-. + .. .+.+.++ .. .........|..+.|+|.
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~-----~~---~~~~~~~~~i~qv~WhP~ 157 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVD-----ER---FFTSNSSLEIKQVRWHPW 157 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEec-----hh---hccCCCCceEEEEEEcCC
Confidence 57889999999999999888876552110 0 11 1111111 00 111245678899999998
Q ss_pred CCCCCCCccceEEEEcCCCcEEEEcCCc
Q 046451 76 GSGSEDFSLGLVAGGLVDGSIDIWNPLS 103 (719)
Q Consensus 76 g~~~~~~~~~~lasgs~dg~I~lwd~~~ 103 (719)
+... ..|+.-+.|+.+++||+.+
T Consensus 158 s~~~-----~~l~vLtsdn~lR~y~~~~ 180 (717)
T PF10168_consen 158 SESD-----SHLVVLTSDNTLRLYDISD 180 (717)
T ss_pred CCCC-----CeEEEEecCCEEEEEecCC
Confidence 7433 6788888899999999953
No 442
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=94.11 E-value=7.7 Score=39.60 Aligned_cols=235 Identities=14% Similarity=0.141 Sum_probs=123.4
Q ss_pred ceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc-----ccCCEEEEEEeCCC------
Q 046451 67 FNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR-----HKGPVRGLEFNSFT------ 135 (719)
Q Consensus 67 V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~-----h~~~V~~l~fsp~~------ 135 (719)
-+.|+|+|.+ .+-++....+...+||..... ..+....++..+.. .....+.+.|+...
T Consensus 25 ~WGia~~p~~--------~~WVadngT~~~TlYdg~~~~--~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~ 94 (336)
T TIGR03118 25 AWGLSYRPGG--------PFWVANTGTGTATLYVGNPDT--QPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSG 94 (336)
T ss_pred cceeEecCCC--------CEEEecCCcceEEeecCCccc--ccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcC
Confidence 4678999987 577777778899999984211 01111123333331 23456778887411
Q ss_pred -----CCEEEEEeCCCcEEEEcCCCCCCC--CccCCccCCCCCCCCCeEEEEecC--CCCcEEEEEeCCCcEEEEECCCC
Q 046451 136 -----PNLLASGADDGEICIWDLSAPAEP--SHFPPLRGNGSAAQGEISFVSWNS--KVQHILASTSYNGTTVVWDLKKQ 206 (719)
Q Consensus 136 -----~~~lasgs~dg~I~iwdl~~~~~~--~~~~~l~~~~~~h~~~I~~l~~sp--~g~~~l~s~s~dg~I~iwd~~~~ 206 (719)
...++.+++||+|.-|.-.-.... ..+..+.. .....--..+++.. .+..+.++--.+++|.|||-.-.
T Consensus 95 ~g~~~~a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~--s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~ 172 (336)
T TIGR03118 95 EGITGPSRFLFVTEDGTLSGWAPALGTTRMTRAEIVVDA--SQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFR 172 (336)
T ss_pred CCcccceeEEEEeCCceEEeecCcCCcccccccEEEEcc--CCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccc
Confidence 123677889999999985433220 11100111 00111233445442 23344455556788999885433
Q ss_pred ceeE--EecCC---CCCceeEEEECCCCCcEEEEEeCCC----------CCCcEEEEecCCCCCceEEee--CCCCCeeE
Q 046451 207 KPVI--SFSES---IKRRCSVLQWNPDVATQLVVASDED----------SSPALRLWDMRNTMSPVKEFV--GHTKGVIA 269 (719)
Q Consensus 207 ~~~~--~~~~~---~~~~i~~l~~sp~g~~~l~~~s~d~----------~~~~I~lwDl~~~~~~~~~~~--~h~~~V~~ 269 (719)
+... .|.+. ..-.-..|.-- +.+++++-...+ ..|.|-+||+.. ..++.+. +.-..-+.
T Consensus 173 ~~~~~g~F~DP~iPagyAPFnIqni--g~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G--~l~~r~as~g~LNaPWG 248 (336)
T TIGR03118 173 PPPLPGSFIDPALPAGYAPFNVQNL--GGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNG--QLLRRVASSGRLNAPWG 248 (336)
T ss_pred cccCCCCccCCCCCCCCCCcceEEE--CCeEEEEEEecCCcccccccCCCcceEEEEcCCC--cEEEEeccCCcccCCce
Confidence 2211 11100 00000111110 122333322211 124799999853 4455552 22334455
Q ss_pred EEeCC-----CCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC------CCeEEeEEcC
Q 046451 270 MSWCP-----NDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT------NWNFDIHWYP 317 (719)
Q Consensus 270 v~~sp-----~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~------~~v~~l~~sp 317 (719)
|+..| -.+.+|+---.||+|..||..+++.+..+.... ..++.|.|..
T Consensus 249 ~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn 307 (336)
T TIGR03118 249 LAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN 307 (336)
T ss_pred eeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence 65544 245666666679999999999999888877543 2467888876
No 443
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=94.05 E-value=3 Score=44.88 Aligned_cols=143 Identities=12% Similarity=0.102 Sum_probs=78.3
Q ss_pred CeEEEEecCCCCcEEEEEe-----------CCC-cEEEEECCC--Cc--eeEEecCCCCCceeEEEECCCCCcEEEEEeC
Q 046451 175 EISFVSWNSKVQHILASTS-----------YNG-TTVVWDLKK--QK--PVISFSESIKRRCSVLQWNPDVATQLVVASD 238 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s-----------~dg-~I~iwd~~~--~~--~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~ 238 (719)
....|+|.++|. ++++.. ..+ .|.+++-.+ ++ ....+. ..-.....|++.++| ++++ ..
T Consensus 15 ~P~~ia~d~~G~-l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa-~~l~~p~Gi~~~~~G--lyV~-~~ 89 (367)
T TIGR02604 15 NPIAVCFDERGR-LWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFA-EELSMVTGLAVAVGG--VYVA-TP 89 (367)
T ss_pred CCceeeECCCCC-EEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEee-cCCCCccceeEecCC--EEEe-CC
Confidence 456889999874 555432 223 677776543 22 223333 233456889998886 4444 33
Q ss_pred CCCCCcEE-EEecCCCC----C--ce-EEeeC----CCCCeeEEEeCCCCCCeEEEEeCC-------------------C
Q 046451 239 EDSSPALR-LWDMRNTM----S--PV-KEFVG----HTKGVIAMSWCPNDSSYLLTCAKD-------------------N 287 (719)
Q Consensus 239 d~~~~~I~-lwDl~~~~----~--~~-~~~~~----h~~~V~~v~~sp~d~~~l~sgs~D-------------------g 287 (719)
. .|. +.|..... + .+ ..+.. +......++|.+ |+.+.++-+.. |
T Consensus 90 ~----~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gp-DG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g 164 (367)
T TIGR02604 90 P----DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGP-DGWLYFNHGNTLASKVTRPGTSDESRQGLGG 164 (367)
T ss_pred C----eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECC-CCCEEEecccCCCceeccCCCccCcccccCc
Confidence 3 354 44543211 1 11 11222 134477899999 77766655421 4
Q ss_pred cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCC
Q 046451 288 RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFD 329 (719)
Q Consensus 288 ~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~D 329 (719)
.|.-+|...++....-.++ .....++|+++| .++++-..+
T Consensus 165 ~i~r~~pdg~~~e~~a~G~-rnp~Gl~~d~~G-~l~~tdn~~ 204 (367)
T TIGR02604 165 GLFRYNPDGGKLRVVAHGF-QNPYGHSVDSWG-DVFFCDNDD 204 (367)
T ss_pred eEEEEecCCCeEEEEecCc-CCCccceECCCC-CEEEEccCC
Confidence 5666666555433222333 336789999998 676664433
No 444
>PHA03098 kelch-like protein; Provisional
Probab=94.04 E-value=1.9 Score=49.01 Aligned_cols=151 Identities=10% Similarity=0.040 Sum_probs=71.8
Q ss_pred CCCEEEEEeCC-----CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC------CcEEEEEC
Q 046451 135 TPNLLASGADD-----GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN------GTTVVWDL 203 (719)
Q Consensus 135 ~~~~lasgs~d-----g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d------g~I~iwd~ 203 (719)
++.+++.|+.+ ..+..||..+..-. ....+..... ....+.+ ++ .+++.|+.+ ..+..||.
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~~lp~~r~----~~~~~~~--~~-~iYv~GG~~~~~~~~~~v~~yd~ 413 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWR-EEPPLIFPRY----NPCVVNV--NN-LIYVIGGISKNDELLKTVECFSL 413 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCcee-eCCCcCcCCc----cceEEEE--CC-EEEEECCcCCCCcccceEEEEeC
Confidence 56777778765 35778888765432 2222221111 1112222 33 566776632 45888998
Q ss_pred CCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCC-----CCcEEEEecCCCC-CceEEeeCCCCCeeEEEeCCCCC
Q 046451 204 KKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS-----SPALRLWDMRNTM-SPVKEFVGHTKGVIAMSWCPNDS 277 (719)
Q Consensus 204 ~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~-----~~~I~lwDl~~~~-~~~~~~~~h~~~V~~v~~sp~d~ 277 (719)
.+++-...-.........+++.. ++ .+++.|+.+.. ...+.+||..+.. ..+..+.........+.+ ++
T Consensus 414 ~t~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~---~~ 488 (534)
T PHA03098 414 NTNKWSKGSPLPISHYGGCAIYH-DG-KIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIF---NN 488 (534)
T ss_pred CCCeeeecCCCCccccCceEEEE-CC-EEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEE---CC
Confidence 87543221110111111122222 33 56777765431 1248889987542 111111111111122222 55
Q ss_pred CeEEEEeCC-----CcEEEEECCCCe
Q 046451 278 SYLLTCAKD-----NRTICWDTVSGE 298 (719)
Q Consensus 278 ~~l~sgs~D-----g~I~iwd~~~~~ 298 (719)
++++.||.+ +.|.+||..+.+
T Consensus 489 ~iyv~GG~~~~~~~~~v~~yd~~~~~ 514 (534)
T PHA03098 489 KIYVVGGDKYEYYINEIEVYDDKTNT 514 (534)
T ss_pred EEEEEcCCcCCcccceeEEEeCCCCE
Confidence 677777654 467788876654
No 445
>PLN02153 epithiospecifier protein
Probab=94.03 E-value=9.7 Score=40.45 Aligned_cols=232 Identities=10% Similarity=0.064 Sum_probs=103.3
Q ss_pred CCCEEEEEeCC-------CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC-----CcEEEEE
Q 046451 135 TPNLLASGADD-------GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN-----GTTVVWD 202 (719)
Q Consensus 135 ~~~~lasgs~d-------g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d-----g~I~iwd 202 (719)
++.+++.|+.+ ..+.+||+.+.+-. ..................+.+ + ..+++.|+.+ ..+.+||
T Consensus 32 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~~~~p~~~~~~~~~~~~--~-~~iyv~GG~~~~~~~~~v~~yd 107 (341)
T PLN02153 32 GDKLYSFGGELKPNEHIDKDLYVFDFNTHTWS-IAPANGDVPRISCLGVRMVAV--G-TKLYIFGGRDEKREFSDFYSYD 107 (341)
T ss_pred CCEEEEECCccCCCCceeCcEEEEECCCCEEE-EcCccCCCCCCccCceEEEEE--C-CEEEEECCCCCCCccCcEEEEE
Confidence 34566666653 35788888775422 211111000000001222333 2 3577777653 3578899
Q ss_pred CCCCceeE--EecC---CCCCceeEEEECCCCCcEEEEEeCCCC--------CCcEEEEecCCCCCceEEeeC------C
Q 046451 203 LKKQKPVI--SFSE---SIKRRCSVLQWNPDVATQLVVASDEDS--------SPALRLWDMRNTMSPVKEFVG------H 263 (719)
Q Consensus 203 ~~~~~~~~--~~~~---~~~~~i~~l~~sp~g~~~l~~~s~d~~--------~~~I~lwDl~~~~~~~~~~~~------h 263 (719)
+++.+-.. .+.. .....-.+++.. ++ .+++.|+.+.. ...|.+||.++.. -..+.. .
T Consensus 108 ~~t~~W~~~~~~~~~~~p~~R~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~--W~~l~~~~~~~~~ 183 (341)
T PLN02153 108 TVKNEWTFLTKLDEEGGPEARTFHSMASD-EN-HVYVFGGVSKGGLMKTPERFRTIEAYNIADGK--WVQLPDPGENFEK 183 (341)
T ss_pred CCCCEEEEeccCCCCCCCCCceeeEEEEE-CC-EEEEECCccCCCccCCCcccceEEEEECCCCe--EeeCCCCCCCCCC
Confidence 88754322 1110 011112222332 33 56777775421 1257888987532 111111 1
Q ss_pred CCCeeEEEeCCCCCCeEEEEeCC-------------CcEEEEECCCCeEEEEec-C--CCC-CeEEeEEcCCCCCEEEEE
Q 046451 264 TKGVIAMSWCPNDSSYLLTCAKD-------------NRTICWDTVSGEIVSELP-A--GTN-WNFDIHWYPKIPGVISAS 326 (719)
Q Consensus 264 ~~~V~~v~~sp~d~~~l~sgs~D-------------g~I~iwd~~~~~~~~~l~-~--h~~-~v~~l~~spdg~~~las~ 326 (719)
.... +++.. ++++++.++.+ +.|.+||..+.+-...-. + ... ...++... ++ ++++.|
T Consensus 184 r~~~-~~~~~--~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~~~-~~-~iyv~G 258 (341)
T PLN02153 184 RGGA-GFAVV--QGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPSARSVFAHAVV-GK-YIIIFG 258 (341)
T ss_pred CCcc-eEEEE--CCeEEEEeccccccccCCccceecCceEEEEcCCCcEEeccccCCCCCCcceeeeEEE-CC-EEEEEC
Confidence 1111 22222 45666655432 468889987664332111 0 111 11222222 33 677777
Q ss_pred eCC--------------CcEEEEeCCCCcccccCCCCCCCCCccCcc-eecCCCceeeeeCCcEEEEccCCCC
Q 046451 327 SFD--------------GKIGIYNIEGCSRYGVGDSNFSAAPLRAPK-WYKRPAGASFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 327 s~D--------------g~I~iwd~~~~~~~~~~~~~~~~~~~~~p~-w~~~~~~~s~s~~Gklv~~~~~~~~ 384 (719)
+.. +.|..||+++.+.......... ..|. |. .-..++...++++++|+.....
T Consensus 259 G~~~~~~~~~~~~~~~~n~v~~~d~~~~~W~~~~~~~~~----~~pr~~~-~~~~~~v~~~~~~~~~gG~~~~ 326 (341)
T PLN02153 259 GEVWPDLKGHLGPGTLSNEGYALDTETLVWEKLGECGEP----AMPRGWT-AYTTATVYGKNGLLMHGGKLPT 326 (341)
T ss_pred cccCCccccccccccccccEEEEEcCccEEEeccCCCCC----CCCCccc-cccccccCCcceEEEEcCcCCC
Confidence 742 2577888877665432211110 0111 21 1123344445678888866443
No 446
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=93.98 E-value=8 Score=41.16 Aligned_cols=23 Identities=13% Similarity=0.195 Sum_probs=15.3
Q ss_pred CCCEEEEEeCC-----------CcEEEEcCCCCC
Q 046451 135 TPNLLASGADD-----------GEICIWDLSAPA 157 (719)
Q Consensus 135 ~~~~lasgs~d-----------g~I~iwdl~~~~ 157 (719)
++++.+.|+.+ ..+..||..+.+
T Consensus 63 ~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~ 96 (346)
T TIGR03547 63 DGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNS 96 (346)
T ss_pred CCEEEEEeCCCCCCCCCcceecccEEEEECCCCE
Confidence 56777777753 247778887654
No 447
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=93.96 E-value=12 Score=42.68 Aligned_cols=168 Identities=13% Similarity=0.129 Sum_probs=93.7
Q ss_pred CCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC--ceeEEecCCCCCceeEEEECC-----CCCcEEEEEeC-CCCCCc
Q 046451 173 QGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ--KPVISFSESIKRRCSVLQWNP-----DVATQLVVASD-EDSSPA 244 (719)
Q Consensus 173 ~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~--~~~~~~~~~~~~~i~~l~~sp-----~g~~~l~~~s~-d~~~~~ 244 (719)
++.|..+.|..++ ..+++...+|.|.+||...+ +.+..+...+...+.-=.|-. +++.++++-+. .+..-+
T Consensus 129 ~~kvv~Ik~~~~~-~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~~~~~~~ll~v~~~~~~k~~ 207 (670)
T PF10395_consen 129 DDKVVGIKFSSDG-KIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFELENGKDLLLTVSQLSNSKLS 207 (670)
T ss_pred ccceEEEEEecCC-CEEEEEEcCCcEEEEeccccccccccccccccccceehhhhhcccccccCCceEEEEEEcCCCcEE
Confidence 4578899999776 58888999999999999322 221122211222111102211 23334444333 433347
Q ss_pred EEEEecCCCCCceEEee---CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCC-----C-CCeEEe-E
Q 046451 245 LRLWDMRNTMSPVKEFV---GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAG-----T-NWNFDI-H 314 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~---~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h-----~-~~v~~l-~ 314 (719)
.+++.+......+.++. .+........|+-++|.+..- .+++|.+|++-+.+...++.-. . ..+.++ .
T Consensus 208 ykL~~l~~~~~~~~El~s~~~e~~~~~~s~f~Y~~G~LY~l--~~~~i~~ysip~f~~~~tI~l~~ii~~~~~~~vSl~~ 285 (670)
T PF10395_consen 208 YKLISLSNESSSIFELSSTILENFGLEDSKFCYQFGKLYQL--SKKTISSYSIPNFQIQKTISLPSIIDKESDDLVSLKP 285 (670)
T ss_pred EEEEEeccCCcceEEeehheeccCCcccceEEEeCCEEEEE--eCCEEEEEEcCCceEEEEEEechhhccccccceEeec
Confidence 88898844344444443 222233344444435554333 7789999999888766665421 1 123333 2
Q ss_pred EcCCCCCEEEEEeCCCcEEEEeCCCCcccccCC
Q 046451 315 WYPKIPGVISASSFDGKIGIYNIEGCSRYGVGD 347 (719)
Q Consensus 315 ~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~ 347 (719)
.+++ ++|.+. +++|++.|+.-..+....+
T Consensus 286 ~s~n--RvLLs~--~nkIyLld~~~~siLse~~ 314 (670)
T PF10395_consen 286 PSPN--RVLLSV--NNKIYLLDLKFESILSEFE 314 (670)
T ss_pred CCCC--eEEEEc--CCEEEEEeehhhhhhhhhh
Confidence 2333 455544 5799999998887766433
No 448
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=93.90 E-value=1.2 Score=51.00 Aligned_cols=128 Identities=16% Similarity=0.201 Sum_probs=78.5
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccC---C-CCC-------CCCceeeeccccCCEEEEEEe-
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISS---G-ETG-------GNPLIAHLSRHKGPVRGLEFN- 132 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~---~-~~~-------~~~~~~~l~~h~~~V~~l~fs- 132 (719)
..|+-|....-+ ...+|+.+.+||.|.+|.++..... . ... ..+....+. -...+++|+++
T Consensus 101 HtIN~i~v~~lg------~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~ 173 (717)
T PF08728_consen 101 HTINFIKVGDLG------GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHD 173 (717)
T ss_pred ceeeEEEecccC------CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEe
Confidence 345555444433 2269999999999999987433210 0 000 001122222 34578999998
Q ss_pred -CCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCC--C---cEEEEEeCCCcEEEEECC
Q 046451 133 -SFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKV--Q---HILASTSYNGTTVVWDLK 204 (719)
Q Consensus 133 -p~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g--~---~~l~s~s~dg~I~iwd~~ 204 (719)
. ..++||++++...|.||-+......... .. ...+...|-+|+|.++. . ..+++++-.|.+.+|++.
T Consensus 174 ~~-~~rlIAVSsNs~~VTVFaf~l~~~r~~~--~~--s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I~ 246 (717)
T PF08728_consen 174 YK-KSRLIAVSSNSQEVTVFAFALVDERFYH--VP--SHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKIK 246 (717)
T ss_pred cC-cceEEEEecCCceEEEEEEecccccccc--cc--ccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEEE
Confidence 5 5788999998888888866553221111 11 11245578899996653 1 277788999999998883
No 449
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=93.70 E-value=2.4 Score=45.74 Aligned_cols=142 Identities=11% Similarity=0.102 Sum_probs=82.1
Q ss_pred EEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC-------CCCEEEEEeCCCcEEEEcCCCCCCCC
Q 046451 88 AGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF-------TPNLLASGADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 88 asgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~-------~~~~lasgs~dg~I~iwdl~~~~~~~ 160 (719)
..|.....++-.|+ ..| +.+.....|... -+.|.|. +.+.|+ |-.+..|.-.|-+-.....
T Consensus 484 ~dg~~~~kLykmDI------ErG---kvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlv-GlS~~svFrIDPR~~gNKi 551 (776)
T COG5167 484 LDGGERDKLYKMDI------ERG---KVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLV-GLSDYSVFRIDPRARGNKI 551 (776)
T ss_pred ecCCCcccceeeec------ccc---eeeeEeecCCcc--eeecCCchhHHhcCccceEE-eecccceEEecccccCCce
Confidence 34444455666666 344 555556555554 4566652 123444 4445555555655433211
Q ss_pred ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCC
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED 240 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~ 240 (719)
.....+. ........+..-...| ++++++..|.|++||--..+....+. +....|..|..+.+|+.+|++|-.
T Consensus 552 ~v~esKd--Y~tKn~Fss~~tTesG--yIa~as~kGDirLyDRig~rAKtalP-~lG~aIk~idvta~Gk~ilaTCk~-- 624 (776)
T COG5167 552 KVVESKD--YKTKNKFSSGMTTESG--YIAAASRKGDIRLYDRIGKRAKTALP-GLGDAIKHIDVTANGKHILATCKN-- 624 (776)
T ss_pred eeeeehh--ccccccccccccccCc--eEEEecCCCceeeehhhcchhhhcCc-ccccceeeeEeecCCcEEEEeecc--
Confidence 1100111 1112233444444454 89999999999999965444434444 778899999999999876666654
Q ss_pred CCCcEEEEecC
Q 046451 241 SSPALRLWDMR 251 (719)
Q Consensus 241 ~~~~I~lwDl~ 251 (719)
.|.+.|++
T Consensus 625 ---yllL~d~~ 632 (776)
T COG5167 625 ---YLLLTDVP 632 (776)
T ss_pred ---eEEEEecc
Confidence 68888875
No 450
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=93.68 E-value=6.6 Score=42.45 Aligned_cols=12 Identities=8% Similarity=0.130 Sum_probs=8.9
Q ss_pred cEEEEECCCCce
Q 046451 197 TTVVWDLKKQKP 208 (719)
Q Consensus 197 ~I~iwd~~~~~~ 208 (719)
.+.+||..+.+-
T Consensus 190 ~v~~YD~~t~~W 201 (376)
T PRK14131 190 EVLSYDPSTNQW 201 (376)
T ss_pred eEEEEECCCCee
Confidence 588899887654
No 451
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=93.62 E-value=1.4 Score=52.80 Aligned_cols=163 Identities=17% Similarity=0.129 Sum_probs=84.1
Q ss_pred ecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCC-ccceEEEEcCCCcEEEEcCCccccCCCC
Q 046451 32 DLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDF-SLGLVAGGLVDGSIDIWNPLSLISSGET 110 (719)
Q Consensus 32 ~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~-~~~~lasgs~dg~I~lwd~~~~~~~~~~ 110 (719)
+.|++.|+.+.+|+++.+.....+ .+.+..|..+..-.-..+-=.. -..+|+.+ .--.|.|+-+.........
T Consensus 92 RaWiTiDn~L~lWny~~~~e~~~~-----d~~shtIl~V~LvkPkpgvFv~~IqhlLvva-T~~ei~ilgV~~~~~~~~~ 165 (1311)
T KOG1900|consen 92 RAWITIDNNLFLWNYESDNELAEY-----DGLSHTILKVGLVKPKPGVFVPEIQHLLVVA-TPVEIVILGVSFDEFTGEL 165 (1311)
T ss_pred ceEEEeCCeEEEEEcCCCCccccc-----cchhhhheeeeeecCCCCcchhhhheeEEec-ccceEEEEEEEeccccCcc
Confidence 448999999999999975544333 2334455555433221100000 00233333 3445666655321111000
Q ss_pred CCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCC--CCCCC-----C-----------ccCCccCCCCCC
Q 046451 111 GGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLS--APAEP-----S-----------HFPPLRGNGSAA 172 (719)
Q Consensus 111 ~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~--~~~~~-----~-----------~~~~l~~~~~~h 172 (719)
........+....-.|+|+.... +|+.|++| .|| .||.+. ....+ . .++.+......+
T Consensus 166 ~~f~~~~~i~~dg~~V~~I~~t~-nGRIF~~G-~dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~ 241 (1311)
T KOG1900|consen 166 SIFNTSFKISVDGVSVNCITYTE-NGRIFFAG-RDG--NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSS 241 (1311)
T ss_pred cccccceeeecCCceEEEEEecc-CCcEEEee-cCC--CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCC
Confidence 00011112222345778888544 67766655 455 444331 11000 0 001111111245
Q ss_pred CCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC
Q 046451 173 QGEISFVSWNSKVQHILASTSYNGTTVVWDLKK 205 (719)
Q Consensus 173 ~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~ 205 (719)
.+.|..++.... ..++.+-++.|+|.+||+..
T Consensus 242 ~dpI~qi~ID~S-R~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 242 KDPIRQITIDNS-RNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred CCcceeeEeccc-cceeeeeccCceEEEEEccC
Confidence 678999999877 46899999999999999976
No 452
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.58 E-value=9.5 Score=43.47 Aligned_cols=219 Identities=14% Similarity=0.138 Sum_probs=111.5
Q ss_pred CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec---CCCCCcee
Q 046451 145 DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS---ESIKRRCS 221 (719)
Q Consensus 145 dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~---~~~~~~i~ 221 (719)
.-.|+||++...- ...+ +- ....+-.+.|+.+. .|++...+|++++|++-... +..+. ......|.
T Consensus 63 ~~~I~If~~sG~l-L~~~--~w-----~~~~lI~mgWs~~e--eLI~v~k~g~v~Vy~~~ge~-ie~~svg~e~~~~~I~ 131 (829)
T KOG2280|consen 63 RPYIRIFNISGQL-LGRI--LW-----KHGELIGMGWSDDE--ELICVQKDGTVHVYGLLGEF-IESNSVGFESQMSDIV 131 (829)
T ss_pred ceeEEEEeccccc-hHHH--Hh-----cCCCeeeecccCCc--eEEEEeccceEEEeecchhh-hcccccccccccCcee
Confidence 3458888876432 2221 11 12277899999883 67888999999999987432 22211 12333455
Q ss_pred EEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC-CCCCeeEEEeC--CCCCCeEEEEeCCCc--EEEEECCC
Q 046451 222 VLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG-HTKGVIAMSWC--PNDSSYLLTCAKDNR--TICWDTVS 296 (719)
Q Consensus 222 ~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~-h~~~V~~v~~s--p~d~~~l~sgs~Dg~--I~iwd~~~ 296 (719)
.+.|..+| .++...++. .+.+-+.... .++++.. ......+.+|. ..+......-.-|-. ..++-...
T Consensus 132 ec~~f~~G--Vavlt~~g~---v~~i~~~~~~--~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~ 204 (829)
T KOG2280|consen 132 ECRFFHNG--VAVLTVSGQ---VILINGVEEP--KLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEE 204 (829)
T ss_pred EEEEecCc--eEEEecCCc---EEEEcCCCcc--hhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceec
Confidence 55554455 333333332 3444443321 1222211 00111112222 101111111111100 01111111
Q ss_pred C-eEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcE
Q 046451 297 G-EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKL 375 (719)
Q Consensus 297 ~-~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gkl 375 (719)
. .....+......+..+..|++. .+|+--..+|.|.+-+++..+.....+-...+.. .-..|..+. .+..++...+
T Consensus 205 ~~~q~~~~~~~~~~~~ki~VS~n~-~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p-~qm~Wcgnd-aVvl~~e~~l 281 (829)
T KOG2280|consen 205 SRVQLHALSWPNSSVVKISVSPNR-RFLALYTETGKIWVVSIDLSQILCEFNCTDHDPP-KQMAWCGND-AVVLSWEVNL 281 (829)
T ss_pred ccccccccCCCCceEEEEEEcCCc-ceEEEEecCCcEEEEecchhhhhhccCCCCCCch-HhceeecCC-ceEEEEeeeE
Confidence 1 1122222223458889999998 7999999999999999988887664332222221 234588775 5667777777
Q ss_pred EEEccCCCC
Q 046451 376 VSFHPKSSA 384 (719)
Q Consensus 376 v~~~~~~~~ 384 (719)
.+.+..+..
T Consensus 282 ~lvgp~gd~ 290 (829)
T KOG2280|consen 282 MLVGPPGDS 290 (829)
T ss_pred EEEcCCCCc
Confidence 777776665
No 453
>KOG1898 consensus Splicing factor 3b, subunit 3 [RNA processing and modification]
Probab=93.56 E-value=14 Score=43.75 Aligned_cols=81 Identities=17% Similarity=0.116 Sum_probs=46.8
Q ss_pred CccceEEEcCCC------CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCC-C
Q 046451 8 NRSASVAFAPDA------PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGS-E 80 (719)
Q Consensus 8 ~~V~~vafSpdg------~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~-~ 80 (719)
..|.|+++.++. ++++.++.|+.+ +++.++..... .......-...+.++.+-...... .
T Consensus 583 ~~vac~ai~~~~~g~krsrfla~a~~d~~v----------riisL~p~d~l---~~ls~q~l~~~~~s~~iv~~~~~~~~ 649 (1205)
T KOG1898|consen 583 TDVACLAIGQDPEGEKRSRFLALASVDNMV----------RIISLDPSDCL---QPLSVQGLSSPPESLCIVEMEATGGT 649 (1205)
T ss_pred eeehhhccCCCCcchhhcceeeeeccccce----------eEEEecCcceE---EEccccccCCCccceEEEEecccCCc
Confidence 357899999886 589999888877 56666532222 222233345555566554433211 1
Q ss_pred CCccceEEEEcCCCcEEEEcC
Q 046451 81 DFSLGLVAGGLVDGSIDIWNP 101 (719)
Q Consensus 81 ~~~~~~lasgs~dg~I~lwd~ 101 (719)
+...-+|.+|-.+|.+.-+.+
T Consensus 650 ~~~~L~l~~GL~NGvllR~~i 670 (1205)
T KOG1898|consen 650 DVAQLYLLIGLRNGVLLRFVI 670 (1205)
T ss_pred cceeEEEEecccccEEEEEEe
Confidence 111246778888887766544
No 454
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=93.56 E-value=2.3 Score=43.98 Aligned_cols=172 Identities=15% Similarity=0.190 Sum_probs=90.6
Q ss_pred cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCC-----CcEEEEEeCCCcEEEEECCCCceeEEecC-------
Q 046451 147 EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKV-----QHILASTSYNGTTVVWDLKKQKPVISFSE------- 214 (719)
Q Consensus 147 ~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g-----~~~l~s~s~dg~I~iwd~~~~~~~~~~~~------- 214 (719)
+|.+||+.+.+.++.+. +........+.+..+.+.... ....++=+..+-|.|+|+.+++..+.+..
T Consensus 35 KLv~~Dl~t~~li~~~~-~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~ 113 (287)
T PF03022_consen 35 KLVAFDLKTNQLIRRYP-FPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPD 113 (287)
T ss_dssp EEEEEETTTTCEEEEEE---CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-S
T ss_pred EEEEEECCCCcEEEEEE-CChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceecc
Confidence 45566666666544432 222222235578888886632 12334444456899999998875544332
Q ss_pred -----------CCCCceeEEEECC---CCCcEEEEEeCCCCCCcEEEEecC-----CCCC--------ceEEeeCCCCCe
Q 046451 215 -----------SIKRRCSVLQWNP---DVATQLVVASDEDSSPALRLWDMR-----NTMS--------PVKEFVGHTKGV 267 (719)
Q Consensus 215 -----------~~~~~i~~l~~sp---~g~~~l~~~s~d~~~~~I~lwDl~-----~~~~--------~~~~~~~h~~~V 267 (719)
.....+..++.++ ++ ..|+.+.-.+ -++|.+. +... .+..+-......
T Consensus 114 ~~~~~i~g~~~~~~dg~~gial~~~~~d~-r~LYf~~lss----~~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~~~s 188 (287)
T PF03022_consen 114 AGPFTIGGESFQWPDGIFGIALSPISPDG-RWLYFHPLSS----RKLYRVPTSVLRDPSLSDAQALASQVQDLGDKGSQS 188 (287)
T ss_dssp SEEEEETTEEEEETTSEEEEEE-TTSTTS--EEEEEETT-----SEEEEEEHHHHCSTT--HHH-HHHT-EEEEE---SE
T ss_pred ccceeccCceEecCCCccccccCCCCCCc-cEEEEEeCCC----CcEEEEEHHHhhCccccccccccccceeccccCCCC
Confidence 0122355666655 55 3444444332 3444432 1110 112221112355
Q ss_pred eEEEeCCCCCCeEEEEeCCCcEEEEECCC-----C-eEEEEecCCCCCeEEeEEcC--CCCCEEEEE
Q 046451 268 IAMSWCPNDSSYLLTCAKDNRTICWDTVS-----G-EIVSELPAGTNWNFDIHWYP--KIPGVISAS 326 (719)
Q Consensus 268 ~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~-----~-~~~~~l~~h~~~v~~l~~sp--dg~~~las~ 326 (719)
..+++++ +|.++++--..+.|..||... . +.+..-...-.++.++.+.. +| .+.+.+
T Consensus 189 ~g~~~D~-~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g-~L~v~s 253 (287)
T PF03022_consen 189 DGMAIDP-NGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDG-YLWVLS 253 (287)
T ss_dssp CEEEEET-TTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS--EEEEE
T ss_pred ceEEECC-CCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCc-eEEEEE
Confidence 6778888 888888888999999999976 1 22222112246889999999 77 454444
No 455
>PHA02790 Kelch-like protein; Provisional
Probab=93.43 E-value=2.6 Score=47.28 Aligned_cols=189 Identities=10% Similarity=-0.038 Sum_probs=89.3
Q ss_pred CCCEEEEEeCCC-----cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC--CcEEEEECCCCc
Q 046451 135 TPNLLASGADDG-----EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN--GTTVVWDLKKQK 207 (719)
Q Consensus 135 ~~~~lasgs~dg-----~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d--g~I~iwd~~~~~ 207 (719)
++.++++|+.++ .+..||..+... ..+..+.. .......+.+ ++ .+.+.|+.+ ..+..||..+++
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W-~~~~~m~~----~r~~~~~v~~--~~-~iYviGG~~~~~sve~ydp~~n~ 342 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNW-IPIPPMNS----PRLYASGVPA--NN-KLYVVGGLPNPTSVERWFHGDAA 342 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEE-EECCCCCc----hhhcceEEEE--CC-EEEEECCcCCCCceEEEECCCCe
Confidence 456667777543 466788776542 22211221 1112222222 33 577777754 357888877654
Q ss_pred eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC-ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCC
Q 046451 208 PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS-PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD 286 (719)
Q Consensus 208 ~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~-~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~D 286 (719)
....-.-.....-.+++. -+| .+++.|+.++....+..||.++..- .+..+.........+.+ ++.+.+.|+
T Consensus 343 W~~~~~l~~~r~~~~~~~-~~g-~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~---~~~IYv~GG-- 415 (480)
T PHA02790 343 WVNMPSLLKPRCNPAVAS-INN-VIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVF---GRRLFLVGR-- 415 (480)
T ss_pred EEECCCCCCCCcccEEEE-ECC-EEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEE---CCEEEEECC--
Confidence 322111011111112222 233 5778877665434688899865321 01111111111122222 556666663
Q ss_pred CcEEEEECCCCeEE--EEecCCCCCeEEeEEcCCCCCEEEEEeCC-----CcEEEEeCCCCcc
Q 046451 287 NRTICWDTVSGEIV--SELPAGTNWNFDIHWYPKIPGVISASSFD-----GKIGIYNIEGCSR 342 (719)
Q Consensus 287 g~I~iwd~~~~~~~--~~l~~h~~~v~~l~~spdg~~~las~s~D-----g~I~iwd~~~~~~ 342 (719)
.+.+||..+++-. ..+....... +++.. ++ .+.+.||.+ ..+.+||.++.+.
T Consensus 416 -~~e~ydp~~~~W~~~~~m~~~r~~~-~~~v~-~~-~IYviGG~~~~~~~~~ve~Yd~~~~~W 474 (480)
T PHA02790 416 -NAEFYCESSNTWTLIDDPIYPRDNP-ELIIV-DN-KLLLIGGFYRGSYIDTIEVYNNRTYSW 474 (480)
T ss_pred -ceEEecCCCCcEeEcCCCCCCcccc-EEEEE-CC-EEEEECCcCCCcccceEEEEECCCCeE
Confidence 5778988765432 2222211222 22322 34 577877754 3466677665543
No 456
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=93.38 E-value=0.03 Score=59.40 Aligned_cols=239 Identities=13% Similarity=0.205 Sum_probs=134.1
Q ss_pred eeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcE
Q 046451 69 RLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEI 148 (719)
Q Consensus 69 ~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I 148 (719)
...|-+++ .-++.++.+..+..||-. + +.+..+. ..+....++|.......++.+-..+.+
T Consensus 39 ~~~w~~e~--------~nlavaca~tiv~~YD~a-------g---q~~le~n-~tg~aldm~wDkegdvlavlAek~~pi 99 (615)
T KOG2247|consen 39 IHRWRPEG--------HNLAVACANTIVIYYDKA-------G---QVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPI 99 (615)
T ss_pred eeeEecCC--------CceehhhhhhHHHhhhhh-------c---ceecccC-CchhHhhhhhccccchhhhhhhcCCCe
Confidence 45677776 457777778888888852 2 2222222 345667888887444456667788999
Q ss_pred EEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCC
Q 046451 149 CIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPD 228 (719)
Q Consensus 149 ~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~ 228 (719)
.+||+.+..... +.... +..-.-+.|++.+ ..++.+...|.+.|++..+.+.+.... .|..++.+++|..+
T Consensus 100 ylwd~n~eytqq----LE~gg---~~s~sll~wsKg~-~el~ig~~~gn~viynhgtsR~iiv~G-kh~RRgtq~av~lE 170 (615)
T KOG2247|consen 100 YLWDVNSEYTQQ----LESGG---TSSKSLLAWSKGT-PELVIGNNAGNIVIYNHGTSRRIIVMG-KHQRRGTQIAVTLE 170 (615)
T ss_pred eechhhhhhHHH----HhccC---cchHHHHhhccCC-ccccccccccceEEEeccchhhhhhhc-ccccceeEEEeccc
Confidence 999998754322 11111 1122236787765 578888889999999988877665554 58899999999998
Q ss_pred CCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCC--eeEE---EeCCCCCCeEEEEeCCCcEEEE--ECC--CCeE
Q 046451 229 VATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKG--VIAM---SWCPNDSSYLLTCAKDNRTICW--DTV--SGEI 299 (719)
Q Consensus 229 g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~--V~~v---~~sp~d~~~l~sgs~Dg~I~iw--d~~--~~~~ 299 (719)
+ +.+.++.+. .+.+-...+....+.+..+.-+. ...+ .|.. -+..+.+.-. |++.+. .+. ++..
T Consensus 171 d--~vil~dcd~---~L~v~~qegeta~ltevggepdnm~~~y~k~n~w~k-age~m~sVvs-gKkhl~yak~nE~D~pv 243 (615)
T KOG2247|consen 171 D--YVILCDCDN---TLSVTTQEGETASLTEVGGEPDNMDFFYGKVNGWGK-AGETMVSVVS-GKKHLMYAKYNELDEPV 243 (615)
T ss_pred c--eeeecCcHH---HHHHhhhccceeeeeeccCccchhhhheeeeecccc-ccceeeeeee-cHHHHHHHhhcCCCCcc
Confidence 6 455555554 33332222111001111110000 0011 1332 2333332211 122111 111 2222
Q ss_pred EEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 300 VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 300 ~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
-..++...+.+.++.|--|| .|.-+.+-|.|..-.+.+.++..
T Consensus 244 al~fq~~~gni~cyrwylDg--~i~igf~ag~iV~iS~h~aeLga 286 (615)
T KOG2247|consen 244 ALQFQEKYGNIHCYRWYLDG--YILIGFDAGYIVSISAHNAELGA 286 (615)
T ss_pred ceEeeecCCceeEEEEeccc--cccccccceeEEEEeccchHHHH
Confidence 22566666778999999998 44445555666666677766544
No 457
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=93.30 E-value=15 Score=40.09 Aligned_cols=152 Identities=14% Similarity=0.125 Sum_probs=82.8
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC---CC-CEEEEEeCCCcEEEEcCCCCCCC-
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF---TP-NLLASGADDGEICIWDLSAPAEP- 159 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~---~~-~~lasgs~dg~I~iwdl~~~~~~- 159 (719)
..|++|+.+|.++||+........ ..+.--..-..+|..+..-.+ .. ..||+ -.-.+|.||.+......
T Consensus 38 d~IivGS~~G~LrIy~P~~~~~~~-----~~lllE~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~ 111 (418)
T PF14727_consen 38 DKIIVGSYSGILRIYDPSGNEFQP-----EDLLLETQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTV 111 (418)
T ss_pred cEEEEeccccEEEEEccCCCCCCC-----ccEEEEEecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCc
Confidence 799999999999999984321100 111111224568888776432 22 34444 55678888887432211
Q ss_pred -----CccCCccCCCCCCCCCeEEEEec----CCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCC
Q 046451 160 -----SHFPPLRGNGSAAQGEISFVSWN----SKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVA 230 (719)
Q Consensus 160 -----~~~~~l~~~~~~h~~~I~~l~~s----p~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~ 230 (719)
..+..+..+. .......+++- ..+..+|++-+.||.+.+|+-+.......+. ..--...+.|.+..+
T Consensus 112 ~~g~~~~L~~~yeh~--l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp--~~llPgPl~Y~~~tD 187 (418)
T PF14727_consen 112 EHGNQYQLELIYEHS--LQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLP--DFLLPGPLCYCPRTD 187 (418)
T ss_pred ccCcEEEEEEEEEEe--cccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcC--CCCCCcCeEEeecCC
Confidence 0100000000 01122223322 2224688889999999999977544333333 233344567777654
Q ss_pred cEEEEEeCCCCCCcEEEEec
Q 046451 231 TQLVVASDEDSSPALRLWDM 250 (719)
Q Consensus 231 ~~l~~~s~d~~~~~I~lwDl 250 (719)
.|++++.+. .|..|..
T Consensus 188 -sfvt~sss~---~l~~Yky 203 (418)
T PF14727_consen 188 -SFVTASSSW---TLECYKY 203 (418)
T ss_pred -EEEEecCce---eEEEecH
Confidence 566666665 6777765
No 458
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=93.26 E-value=0.21 Score=56.90 Aligned_cols=100 Identities=17% Similarity=0.290 Sum_probs=62.2
Q ss_pred ceEEEEEeeccCCc--ccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCce
Q 046451 39 ANLEIFKLDFQSED--RDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLI 116 (719)
Q Consensus 39 ~~i~iwd~~~~~~~--~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~ 116 (719)
+.+.|||++.-+.. ..+.+.-.......+.-|.|++--.. .-+++.+..+++|++.+++. ...
T Consensus 153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~-----~~~ic~~~~~~~i~lL~~~r----------a~~ 217 (1283)
T KOG1916|consen 153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVN-----KVYICYGLKGGEIRLLNINR----------ALR 217 (1283)
T ss_pred hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccc-----cceeeeccCCCceeEeeech----------HHH
Confidence 45578988753222 22322222233445566777775421 16888888999999988743 223
Q ss_pred eeeccccCCEEEEEE-----------eCCCCCEEEEEeCCCcEEEEcCC
Q 046451 117 AHLSRHKGPVRGLEF-----------NSFTPNLLASGADDGEICIWDLS 154 (719)
Q Consensus 117 ~~l~~h~~~V~~l~f-----------sp~~~~~lasgs~dg~I~iwdl~ 154 (719)
..+.+|...+.+++| ++ ||..|+.++.||.+++|-+-
T Consensus 218 ~l~rsHs~~~~d~a~~~~g~~~l~~lSp-DGtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 218 SLFRSHSQRVTDMAFFAEGVLKLASLSP-DGTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred HHHHhcCCCcccHHHHhhchhhheeeCC-CCcEEEEeecCCccceeeee
Confidence 445567776666554 56 77888888888888777653
No 459
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=93.16 E-value=0.8 Score=51.92 Aligned_cols=122 Identities=14% Similarity=0.196 Sum_probs=77.9
Q ss_pred CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEE
Q 046451 20 PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIW 99 (719)
Q Consensus 20 ~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lw 99 (719)
--++.|+.-+.+.+-.+....+.|||...+. +.....+...+.|.++.|.....+ +.|++.+..+.|.+|
T Consensus 32 ~~li~gss~~k~a~V~~~~~~LtIWD~~~~~----lE~~~~f~~~~~I~dLDWtst~d~------qsiLaVGf~~~v~l~ 101 (631)
T PF12234_consen 32 PSLISGSSIKKIAVVDSSRSELTIWDTRSGV----LEYEESFSEDDPIRDLDWTSTPDG------QSILAVGFPHHVLLY 101 (631)
T ss_pred cceEeecccCcEEEEECCCCEEEEEEcCCcE----EEEeeeecCCCceeeceeeecCCC------CEEEEEEcCcEEEEE
Confidence 4577777777777767788899999998654 333344467889999999876532 456666677888888
Q ss_pred cCCccccCCCCCCCCceeee--cccc-CCEEEEEEeCCCCCEEEEEeCCCcEEEEcCC
Q 046451 100 NPLSLISSGETGGNPLIAHL--SRHK-GPVRGLEFNSFTPNLLASGADDGEICIWDLS 154 (719)
Q Consensus 100 d~~~~~~~~~~~~~~~~~~l--~~h~-~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~ 154 (719)
.-........+..+..++.+ ..|+ ..|.+..|.. ++.+++.++ +.+.|+|-.
T Consensus 102 ~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~-~G~LvV~sG--Nqlfv~dk~ 156 (631)
T PF12234_consen 102 TQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLK-DGTLVVGSG--NQLFVFDKW 156 (631)
T ss_pred EccchhhhcCCcccceeEEEEeecCCCCCccceeEec-CCeEEEEeC--CEEEEECCC
Confidence 64221111222223344333 3444 6889999988 555554443 568888754
No 460
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=92.90 E-value=18 Score=40.82 Aligned_cols=257 Identities=15% Similarity=0.117 Sum_probs=117.8
Q ss_pred cCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCC-CCCceeeeecCCCCCCCCCccceEEEEcCCC
Q 046451 16 APDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPS-SERFNRLAWGKNGSGSEDFSLGLVAGGLVDG 94 (719)
Q Consensus 16 Spdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~-~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg 94 (719)
..++..+..++.+|.+. ...+..... .+. ....+. ....+++.+..++. .+|+.|+.-|
T Consensus 219 ~~~~~~~lL~~e~G~l~----------~l~l~~~~~--~i~-i~~~g~~~~~~s~l~~l~~g~-------d~lf~gs~~g 278 (504)
T PF10433_consen 219 DKDGDRILLQDEDGDLY----------LLTLDNDGG--SIS-ITYLGTLCSIASSLTYLKNGG-------DYLFVGSEFG 278 (504)
T ss_dssp STTSSEEEEEETTSEEE----------EEEEEEEEE--EEE-EEEEEE--S-ESEEEEESTT---------EEEEEESSS
T ss_pred cCCCCEEEEEeCCCeEE----------EEEEEECCC--eEE-EEEcCCcCChhheEEEEcCCC-------EEEEEEEecC
Confidence 45667888888888662 222222111 111 111222 44556777777641 4888888777
Q ss_pred cEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC---CCC------EEEEEe---CCCcEEEEcCCCCCC--CC
Q 046451 95 SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF---TPN------LLASGA---DDGEICIWDLSAPAE--PS 160 (719)
Q Consensus 95 ~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~---~~~------~lasgs---~dg~I~iwdl~~~~~--~~ 160 (719)
.=.++.+.. ..- ..+..+. .-++|.++++... +.. .|++++ .+|.|++..-.-.-. ..
T Consensus 279 ds~l~~~~~----~~l---~~~~~~~-N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~Gi~~~~~~~ 350 (504)
T PF10433_consen 279 DSQLLQISL----SNL---EVLDSLP-NWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRNGIGIEGLEL 350 (504)
T ss_dssp -EEEEEEES----ESE---EEEEEE-----SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEESBEEE--EE
T ss_pred CcEEEEEeC----CCc---EEEEecc-CcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEeccCCceeeee
Confidence 655555521 111 3333333 4578888888531 121 555554 467888874321111 11
Q ss_pred ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC---CCceeEEecC----CCCCceeEEEECCCCCcEE
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK---KQKPVISFSE----SIKRRCSVLQWNPDVATQL 233 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~---~~~~~~~~~~----~~~~~i~~l~~sp~g~~~l 233 (719)
....+.+ -..++.+.....+..+|+.+..+ .-+++.+. ..+.+..... .....+.+-.+. + ..+
T Consensus 351 ~~~~l~~-----v~~iW~l~~~~~~~~~lv~S~~~-~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~-~--~~i 421 (504)
T PF10433_consen 351 ASSELPG-----VTGIWTLKLSSSDHSYLVLSFPN-ETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVG-D--GRI 421 (504)
T ss_dssp EEEEEST-----EEEEEEE-SSSSSBSEEEEEESS-EEEEEEES----SSEEEEE---TS-SSS-EEEEEEET-T--TEE
T ss_pred eccCCCC-----ceEEEEeeecCCCceEEEEEcCC-ceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcC-C--CeE
Confidence 1100110 12455555544223466655554 44555553 2333322110 112223222333 2 356
Q ss_pred EEEeCCCCCCcEEEEecCCCCCceEEe-eCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec-C----CC
Q 046451 234 VVASDEDSSPALRLWDMRNTMSPVKEF-VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP-A----GT 307 (719)
Q Consensus 234 ~~~s~d~~~~~I~lwDl~~~~~~~~~~-~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~-~----h~ 307 (719)
+=.... .|++.|.... +..... ......|.+.+++ +.+++.+-.++.+.++.+.......... . ..
T Consensus 422 vQVt~~----~i~l~~~~~~-~~~~~w~~~~~~~I~~a~~~---~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (504)
T PF10433_consen 422 VQVTPK----GIRLIDLEDG-KLTQEWKPPAGSIIVAASIN---DPQVLVALSGGELVYFELDDNKISVSDNDETILELD 493 (504)
T ss_dssp EEEESS----EEEEEESSST-SEEEEEE-TTS---SEEEES---SSEEEEEE-TTEEEEEEEETTEEEEEEE----EE-S
T ss_pred EEEecC----eEEEEECCCC-eEEEEEeCCCCCeEEEEEEC---CCEEEEEEeCCcEEEEEEECCceeeeeeccccccCC
Confidence 655555 4899987654 333333 2234566666664 3567777778889999887766543322 1 34
Q ss_pred CCeEEeEEcC
Q 046451 308 NWNFDIHWYP 317 (719)
Q Consensus 308 ~~v~~l~~sp 317 (719)
..|.++..+|
T Consensus 494 ~eis~l~i~p 503 (504)
T PF10433_consen 494 NEISCLSIEP 503 (504)
T ss_dssp S-EEEEE---
T ss_pred CceEEEEeCC
Confidence 5688877665
No 461
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=92.57 E-value=16 Score=38.77 Aligned_cols=21 Identities=19% Similarity=0.385 Sum_probs=15.1
Q ss_pred ceeeeeCCcEEEEccCCCCCc
Q 046451 366 GASFGFGGKLVSFHPKSSAGH 386 (719)
Q Consensus 366 ~~s~s~~Gklv~~~~~~~~~~ 386 (719)
+.+...+|++++++..+..+.
T Consensus 315 ~~~~~~~~~iyv~GG~~~~~~ 335 (346)
T TIGR03547 315 GVSVSWNNGVLLIGGENSGGK 335 (346)
T ss_pred eEEEEcCCEEEEEeccCCCCC
Confidence 345667999999997665444
No 462
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=92.57 E-value=6.2 Score=45.41 Aligned_cols=114 Identities=11% Similarity=0.163 Sum_probs=69.4
Q ss_pred CeEEEEecCC-CCcEEEEEeCCCcEEEEECCC-------C-------------ceeEEecCCCCCceeEEEEC--CCCCc
Q 046451 175 EISFVSWNSK-VQHILASTSYNGTTVVWDLKK-------Q-------------KPVISFSESIKRRCSVLQWN--PDVAT 231 (719)
Q Consensus 175 ~I~~l~~sp~-g~~~l~s~s~dg~I~iwd~~~-------~-------------~~~~~~~~~~~~~i~~l~~s--p~g~~ 231 (719)
.|+.|....- +..+|+.|.+||.|.+|.+++ . ++...+ .....+.+++++ ... +
T Consensus 102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~--~v~~SaWGLdIh~~~~~-r 178 (717)
T PF08728_consen 102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHL--RVGASAWGLDIHDYKKS-R 178 (717)
T ss_pred eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEe--ecCCceeEEEEEecCcc-e
Confidence 3555544322 235888999999999997631 0 011222 355678899988 443 4
Q ss_pred EEEEEeCCCCCCcEEEEecCC--CCCceEEeeCCCCCeeEEEeCCCC--CC---eEEEEeCCCcEEEEEC
Q 046451 232 QLVVASDEDSSPALRLWDMRN--TMSPVKEFVGHTKGVIAMSWCPND--SS---YLLTCAKDNRTICWDT 294 (719)
Q Consensus 232 ~l~~~s~d~~~~~I~lwDl~~--~~~~~~~~~~h~~~V~~v~~sp~d--~~---~l~sgs~Dg~I~iwd~ 294 (719)
+|++++... .|.||-... .+.....-..|...|-+|+|-+++ +. +|++++-.|.+.+|++
T Consensus 179 lIAVSsNs~---~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 179 LIAVSSNSQ---EVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEEEecCCc---eEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 555555554 566654432 211111112356688899998733 22 7888899999999888
No 463
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=92.52 E-value=8.6 Score=41.39 Aligned_cols=194 Identities=11% Similarity=-0.025 Sum_probs=107.2
Q ss_pred EEEEEeCCCcEEEEECCCCceeEEecCCC-CCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCC-C
Q 046451 188 ILASTSYNGTTVVWDLKKQKPVISFSESI-KRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHT-K 265 (719)
Q Consensus 188 ~l~s~s~dg~I~iwd~~~~~~~~~~~~~~-~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~-~ 265 (719)
.+.++..+|.|.-+|.++++.+....... ...+..-.+..+|+ ++.++.++ .++.+|.+++ +.+-...... .
T Consensus 70 ~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~--i~~g~~~g---~~y~ld~~~G-~~~W~~~~~~~~ 143 (370)
T COG1520 70 TVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK--IYVGSWDG---KLYALDASTG-TLVWSRNVGGSP 143 (370)
T ss_pred eEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe--EEEecccc---eEEEEECCCC-cEEEEEecCCCe
Confidence 56666888999999999988766544211 12333333333663 77777776 7888998765 3343333333 1
Q ss_pred CeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC---CCeEEeEEcCCCCCEEEEEeC--CCcEEEEeCCCC
Q 046451 266 GVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT---NWNFDIHWYPKIPGVISASSF--DGKIGIYNIEGC 340 (719)
Q Consensus 266 ~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~---~~v~~l~~spdg~~~las~s~--Dg~I~iwd~~~~ 340 (719)
.+..-..- ....++.++.++.+...|..+|+.+.++.... ..+..-....++ .+..+.. ++.+.-.|.+++
T Consensus 144 ~~~~~~v~--~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~--~vy~~~~~~~~~~~a~~~~~G 219 (370)
T COG1520 144 YYASPPVV--GDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASG--TVYVGSDGYDGILYALNAEDG 219 (370)
T ss_pred EEecCcEE--cCcEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecc--eEEEecCCCcceEEEEEccCC
Confidence 11111111 22344444478999999999998877754422 112111112233 4555554 566777777777
Q ss_pred cccccCCCCCCCC--------CccCcceecCCCceeeeeCCcEEEEccCCCCCcccccc
Q 046451 341 SRYGVGDSNFSAA--------PLRAPKWYKRPAGASFGFGGKLVSFHPKSSAGHTSENS 391 (719)
Q Consensus 341 ~~~~~~~~~~~~~--------~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~~~~~~~~~ 391 (719)
...-......... ......-........++.+|+++++...+++..|....
T Consensus 220 ~~~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~~G~~~W~~~~ 278 (370)
T COG1520 220 TLKWSQKVSQTIGRTAISTTPAVDGGPVYVDGGVYAGSYGGKLLCLDADTGELIWSFPA 278 (370)
T ss_pred cEeeeeeeecccCcccccccccccCceEEECCcEEEEecCCeEEEEEcCCCceEEEEec
Confidence 6644211100100 00111111111225778889999999999988877554
No 464
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=92.34 E-value=14 Score=39.78 Aligned_cols=18 Identities=6% Similarity=0.185 Sum_probs=13.4
Q ss_pred eeeeeCCcEEEEccCCCC
Q 046451 367 ASFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 367 ~s~s~~Gklv~~~~~~~~ 384 (719)
.+...+|++++++.....
T Consensus 338 ~av~~~~~iyv~GG~~~~ 355 (376)
T PRK14131 338 VSVSWNNGVLLIGGETAG 355 (376)
T ss_pred EEEEeCCEEEEEcCCCCC
Confidence 467789999999975443
No 465
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=92.27 E-value=6 Score=35.30 Aligned_cols=115 Identities=16% Similarity=0.186 Sum_probs=69.8
Q ss_pred EecCCCCcEEEEEeCCCcEEEEECCCC--------ceeEEecCCCCCceeEEEECC----CCCcEEEEEeCCCCCCcEEE
Q 046451 180 SWNSKVQHILASTSYNGTTVVWDLKKQ--------KPVISFSESIKRRCSVLQWNP----DVATQLVVASDEDSSPALRL 247 (719)
Q Consensus 180 ~~sp~g~~~l~s~s~dg~I~iwd~~~~--------~~~~~~~~~~~~~i~~l~~sp----~g~~~l~~~s~d~~~~~I~l 247 (719)
.|.... .-|++++..|+|.|++.... ..+..+. ....|++|+-.+ ++...|+.|+.. .|..
T Consensus 5 kfDG~~-pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN--in~~italaaG~l~~~~~~D~LliGt~t----~lla 77 (136)
T PF14781_consen 5 KFDGVH-PCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN--INQEITALAAGRLKPDDGRDCLLIGTQT----SLLA 77 (136)
T ss_pred EeCCCc-eeEEEEecCCEEEEECCCccccccccccCceeEEE--CCCceEEEEEEecCCCCCcCEEEEeccc----eEEE
Confidence 444443 25777778889999986533 2344444 566677775433 234567777776 5999
Q ss_pred EecCCCCCceEEeeCCCCCeeEEEeCCC--CCCeEEEEeCCCcEEEEECCCCeEEEEe
Q 046451 248 WDMRNTMSPVKEFVGHTKGVIAMSWCPN--DSSYLLTCAKDNRTICWDTVSGEIVSEL 303 (719)
Q Consensus 248 wDl~~~~~~~~~~~~h~~~V~~v~~sp~--d~~~l~sgs~Dg~I~iwd~~~~~~~~~l 303 (719)
||+.+..... ++.-.++|.++.+-.- ...-|+..+.+..|.-||..-.+...+.
T Consensus 78 YDV~~N~d~F--yke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWtV 133 (136)
T PF14781_consen 78 YDVENNSDLF--YKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWTV 133 (136)
T ss_pred EEcccCchhh--hhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEEe
Confidence 9998754322 2233467777776321 1234555556778888888665655544
No 466
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=92.26 E-value=20 Score=42.48 Aligned_cols=112 Identities=13% Similarity=0.189 Sum_probs=66.7
Q ss_pred EEEEEeCCCcEEEEECCCCceeEEecCCCCC-------ceeEEEECCC---------------CCcEEEEEeCCCCCCcE
Q 046451 188 ILASTSYNGTTVVWDLKKQKPVISFSESIKR-------RCSVLQWNPD---------------VATQLVVASDEDSSPAL 245 (719)
Q Consensus 188 ~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~-------~i~~l~~sp~---------------g~~~l~~~s~d~~~~~I 245 (719)
.++.++.++.|+-.|.++++.+.++...... .+..+.+... ....++.++.|+ .|
T Consensus 196 ~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg---~L 272 (764)
T TIGR03074 196 TLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDA---RL 272 (764)
T ss_pred EEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCC---eE
Confidence 6777888899999999999998887632111 1223333211 123566777777 78
Q ss_pred EEEecCCCCCceEEeeCCCCCe-------------eEEEeCC-CCCCeEEEEeC----------CCcEEEEECCCCeEEE
Q 046451 246 RLWDMRNTMSPVKEFVGHTKGV-------------IAMSWCP-NDSSYLLTCAK----------DNRTICWDTVSGEIVS 301 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~~h~~~V-------------~~v~~sp-~d~~~l~sgs~----------Dg~I~iwd~~~~~~~~ 301 (719)
.-.|.++++. +-.+.. .+.| ..+.-.| -.+..+++|+. +|.|+-+|.++|+.+.
T Consensus 273 iALDA~TGk~-~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W 350 (764)
T TIGR03074 273 IALDADTGKL-CEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVW 350 (764)
T ss_pred EEEECCCCCE-EEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEee
Confidence 8888887643 333321 1111 0111111 01245555642 6889999999999988
Q ss_pred Eec
Q 046451 302 ELP 304 (719)
Q Consensus 302 ~l~ 304 (719)
.+.
T Consensus 351 ~~~ 353 (764)
T TIGR03074 351 AWD 353 (764)
T ss_pred EEe
Confidence 775
No 467
>PHA03378 EBNA-3B; Provisional
Probab=92.23 E-value=3.8 Score=45.62 Aligned_cols=11 Identities=18% Similarity=0.163 Sum_probs=5.7
Q ss_pred HHHhcCChhHH
Q 046451 674 QALDNNDFGTA 684 (719)
Q Consensus 674 ~~~~~~~~~~a 684 (719)
++|+.|.+++-
T Consensus 957 ~~l~~g~~~~~ 967 (991)
T PHA03378 957 QTLECGGTTKQ 967 (991)
T ss_pred hhhhcCCcchh
Confidence 45555555443
No 468
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=92.14 E-value=14 Score=39.40 Aligned_cols=201 Identities=12% Similarity=0.143 Sum_probs=104.1
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeC---CCCCE--EEEEe-CC---CcEEEEcCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNS---FTPNL--LASGA-DD---GEICIWDLSA 155 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp---~~~~~--lasgs-~d---g~I~iwdl~~ 155 (719)
.+|+....++-+.+||++ + +.+..+. .+.++.+..-. .+++. |+.++ ++ .+|++|.+..
T Consensus 69 SlIigTdK~~GL~VYdL~-------G---k~lq~~~--~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~ 136 (381)
T PF02333_consen 69 SLIIGTDKKGGLYVYDLD-------G---KELQSLP--VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDP 136 (381)
T ss_dssp -EEEEEETTTEEEEEETT-------S----EEEEE---SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEET
T ss_pred ceEEEEeCCCCEEEEcCC-------C---cEEEeec--CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecC
Confidence 688888888999999984 3 5555553 23333333211 02332 34443 32 4699998864
Q ss_pred CCC-CCccCCccCCCCCCCCCeEEEEec--C-CCCcEEEEEeCCCcEEEEECC---CC----ceeEEecCCCCCceeEEE
Q 046451 156 PAE-PSHFPPLRGNGSAAQGEISFVSWN--S-KVQHILASTSYNGTTVVWDLK---KQ----KPVISFSESIKRRCSVLQ 224 (719)
Q Consensus 156 ~~~-~~~~~~l~~~~~~h~~~I~~l~~s--p-~g~~~l~s~s~dg~I~iwd~~---~~----~~~~~~~~~~~~~i~~l~ 224 (719)
... +..+.............+..+|+. + +|..++++...+|.+..|.+. .+ +.+++|. ....+..|.
T Consensus 137 ~~g~L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~--~~sQ~EGCV 214 (381)
T PF02333_consen 137 DTGELTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFK--VGSQPEGCV 214 (381)
T ss_dssp TTTEEEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE---SS-EEEEE
T ss_pred CCCcceEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEec--CCCcceEEE
Confidence 221 111100000000112356777763 3 355577778889988888774 23 3567776 556888888
Q ss_pred ECCCCCcEEEEEeCCCCCCcEEEEecCCCCC----ceEEeeC--CCCCeeEEEeCC--CCCCeEE-EEeCCCcEEEEECC
Q 046451 225 WNPDVATQLVVASDEDSSPALRLWDMRNTMS----PVKEFVG--HTKGVIAMSWCP--NDSSYLL-TCAKDNRTICWDTV 295 (719)
Q Consensus 225 ~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~----~~~~~~~--h~~~V~~v~~sp--~d~~~l~-sgs~Dg~I~iwd~~ 295 (719)
..... ..|+.+-.+. -|+-|+.+-... .+....+ ....|..|++-. +...||+ +.-.+++..|||..
T Consensus 215 VDDe~-g~LYvgEE~~---GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~ 290 (381)
T PF02333_consen 215 VDDET-GRLYVGEEDV---GIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDRE 290 (381)
T ss_dssp EETTT-TEEEEEETTT---EEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESS
T ss_pred Eeccc-CCEEEecCcc---EEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecC
Confidence 88776 4667777665 577777753221 1212222 335667777642 1223444 44467889999987
Q ss_pred C-CeEEEEe
Q 046451 296 S-GEIVSEL 303 (719)
Q Consensus 296 ~-~~~~~~l 303 (719)
. ...+..|
T Consensus 291 ~~~~~~g~f 299 (381)
T PF02333_consen 291 GPNAYVGSF 299 (381)
T ss_dssp TT--EEEEE
T ss_pred CCCcccceE
Confidence 4 3444444
No 469
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.91 E-value=2.9 Score=44.57 Aligned_cols=157 Identities=13% Similarity=0.206 Sum_probs=97.8
Q ss_pred EEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC
Q 046451 127 RGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ 206 (719)
Q Consensus 127 ~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~ 206 (719)
+.+-|. |.+..+.+...|.+.=|.+.....-.. .......++.|.++.|++|. ..|++--.+.+|.+++....
T Consensus 26 ngvFfD--DaNkqlfavrSggatgvvvkgpndDVp----iSfdm~d~G~I~SIkFSlDn-kilAVQR~~~~v~f~nf~~d 98 (657)
T KOG2377|consen 26 NGVFFD--DANKQLFAVRSGGATGVVVKGPNDDVP----ISFDMDDKGEIKSIKFSLDN-KILAVQRTSKTVDFCNFIPD 98 (657)
T ss_pred cceeec--cCcceEEEEecCCeeEEEEeCCCCCCC----ceeeecCCCceeEEEeccCc-ceEEEEecCceEEEEecCCC
Confidence 445554 344444445556666676654332111 11122345699999999996 68999999999999998433
Q ss_pred ceeEE--ecC-CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEE
Q 046451 207 KPVIS--FSE-SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283 (719)
Q Consensus 207 ~~~~~--~~~-~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sg 283 (719)
+.... ..+ .....|....|+.+. -++.-.+.| +.+|-+......++..+.|.-.|.-..|++ +.+.++-+
T Consensus 99 ~~~l~~~~~ck~k~~~IlGF~W~~s~--e~A~i~~~G----~e~y~v~pekrslRlVks~~~nvnWy~yc~-et~v~LL~ 171 (657)
T KOG2377|consen 99 NSQLEYTQECKTKNANILGFCWTSST--EIAFITDQG----IEFYQVLPEKRSLRLVKSHNLNVNWYMYCP-ETAVILLS 171 (657)
T ss_pred chhhHHHHHhccCcceeEEEEEecCe--eEEEEecCC----eEEEEEchhhhhhhhhhhcccCccEEEEcc-ccceEeee
Confidence 32221 111 234558899999774 466666665 788877655555677777888898899998 65544433
Q ss_pred -e-CCCcEEEEECCCC
Q 046451 284 -A-KDNRTICWDTVSG 297 (719)
Q Consensus 284 -s-~Dg~I~iwd~~~~ 297 (719)
+ ..+.+.=+.++++
T Consensus 172 t~~~~n~lnpf~~~~~ 187 (657)
T KOG2377|consen 172 TTVLENVLNPFHFRAG 187 (657)
T ss_pred ccccccccccEEEeec
Confidence 3 4455554555444
No 470
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=91.82 E-value=0.082 Score=60.01 Aligned_cols=124 Identities=14% Similarity=0.171 Sum_probs=62.7
Q ss_pred CCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC--CCCEE
Q 046451 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF--TPNLL 139 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~--~~~~l 139 (719)
+..+.|-.|.|-.... -.+. -.-|.+.|||++-... +....-.+.........+.-+.|++. +.-++
T Consensus 130 gf~G~v~dl~fah~~~-------pk~~--~~vg~lfVy~vd~l~G--~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~i 198 (1283)
T KOG1916|consen 130 GFPGGVGDLQFAHTKC-------PKGR--RLVGELFVYDVDVLQG--EIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYI 198 (1283)
T ss_pred cCCCCcccccccccCC-------hHHH--HHhhhhheeehHhhcc--ccccceEEeecCcCCCCcceeeeccccccccee
Confidence 3456666777754321 1111 3347889999864221 11000112222233344555666553 34677
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK 204 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~ 204 (719)
+.+..+++|++.++++... .. ++ +|...+..++|...|-..|..-+-||++..|-+.
T Consensus 199 c~~~~~~~i~lL~~~ra~~-~l---~r----sHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~ 255 (1283)
T KOG1916|consen 199 CYGLKGGEIRLLNINRALR-SL---FR----SHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAIS 255 (1283)
T ss_pred eeccCCCceeEeeechHHH-HH---HH----hcCCCcccHHHHhhchhhheeeCCCCcEEEEeec
Confidence 7788889999887765433 11 22 2555666666655543333333444444444433
No 471
>KOG1984 consensus Vesicle coat complex COPII, subunit SFB3 [Intracellular trafficking, secretion, and vesicular transport]
Probab=91.81 E-value=19 Score=41.86 Aligned_cols=13 Identities=38% Similarity=0.355 Sum_probs=5.5
Q ss_pred ChhHHHhheeeee
Q 046451 680 DFGTALQIQVLLT 692 (719)
Q Consensus 680 ~~~~a~~i~~~l~ 692 (719)
|.-+|.+|...|+
T Consensus 302 Dl~~as~iPLalv 314 (1007)
T KOG1984|consen 302 DLLKASQIPLALV 314 (1007)
T ss_pred hHHHhcCCcceeE
Confidence 3334444444333
No 472
>KOG1898 consensus Splicing factor 3b, subunit 3 [RNA processing and modification]
Probab=91.68 E-value=12 Score=44.38 Aligned_cols=190 Identities=9% Similarity=0.070 Sum_probs=101.1
Q ss_pred cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCc-EEEEEe-----------CCCcEEEEECCCCceeEEecC
Q 046451 147 EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQH-ILASTS-----------YNGTTVVWDLKKQKPVISFSE 214 (719)
Q Consensus 147 ~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~-~l~s~s-----------~dg~I~iwd~~~~~~~~~~~~ 214 (719)
.|+++|..+++.+..+. +. .....-.+..+.|+..... +++++. .+|.++.|++-.......+..
T Consensus 854 ~I~~~d~~s~~~~~~~~-l~--~ne~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~lellh 930 (1205)
T KOG1898|consen 854 SIRVFDPKSGKIICLVE-LG--QNEAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGDKLELLH 930 (1205)
T ss_pred eEEEEcCCCCceEEEEe-ec--CCcchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecCceeeeee
Confidence 36777766655443321 11 1112224566666655433 333332 245677777654333333331
Q ss_pred CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEe--eCCCCCeeEEEeCCCCCCeEEEEeCCCcEEE-
Q 046451 215 SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF--VGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC- 291 (719)
Q Consensus 215 ~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~--~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~i- 291 (719)
...-.-.-.+..+... .+++|-.+ .+++||+-+. ++++.. ..-...|+.+++. +..|+.|...-.|++
T Consensus 931 ~T~~~~~v~Ai~~f~~-~~LagvG~----~l~~YdlG~K-~lLRk~e~k~~p~~Is~iqt~---~~RI~VgD~qeSV~~~ 1001 (1205)
T KOG1898|consen 931 KTEIPGPVGAICPFQG-RVLAGVGR----FLRLYDLGKK-KLLRKCELKFIPNRISSIQTY---GARIVVGDIQESVHFV 1001 (1205)
T ss_pred ccCCCccceEEeccCC-EEEEeccc----EEEEeeCChH-HHHhhhhhccCceEEEEEeec---ceEEEEeeccceEEEE
Confidence 1222223345666664 45555444 7999999654 333322 2235678888874 466777765555554
Q ss_pred -EECCCCeEEEEecC--CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCC
Q 046451 292 -WDTVSGEIVSELPA--GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFS 351 (719)
Q Consensus 292 -wd~~~~~~~~~l~~--h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~ 351 (719)
|+-...+. ..+-+ -..+|+++.+-..+ .+|.+..=|.+.+..+-........++...
T Consensus 1002 ~y~~~~n~l-~~fadD~~pR~Vt~~~~lD~~--tvagaDrfGNi~~vR~P~d~~e~~~edpt~ 1061 (1205)
T KOG1898|consen 1002 RYRREDNQL-IVFADDPVPRHVTALELLDYD--TVAGADRFGNIAVVRIPPDVSEEASEDPTE 1061 (1205)
T ss_pred EEecCCCeE-EEEeCCCccceeeEEEEecCC--ceeeccccCcEEEEECCCcchhhhccCCcc
Confidence 44444443 33332 34578888877665 577776668888887765544433344433
No 473
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=91.67 E-value=2.5 Score=44.92 Aligned_cols=161 Identities=14% Similarity=0.102 Sum_probs=88.5
Q ss_pred CCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCcee-EEecCC-CC---Ccee-EEEECCCCCcEEEEEeCCCCCCcEE
Q 046451 173 QGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPV-ISFSES-IK---RRCS-VLQWNPDVATQLVVASDEDSSPALR 246 (719)
Q Consensus 173 ~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~-~~~~~~-~~---~~i~-~l~~sp~g~~~l~~~s~d~~~~~I~ 246 (719)
.+.+..+-..|+|+ .|..-+. .++.++++.+.... .++... .. ..|+ .+..- .|..-+++...|| .|.
T Consensus 220 ~~~v~qllL~Pdg~-~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL-~Gg~SLLv~~~dG---~vs 293 (733)
T COG4590 220 FSDVSQLLLTPDGK-TLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLL-SGGFSLLVVHEDG---LVS 293 (733)
T ss_pred ccchHhhEECCCCC-EEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHH-hCceeEEEEcCCC---cee
Confidence 34677788899985 5554444 67888888754321 111111 11 1121 11111 2334566777776 455
Q ss_pred EE-ecCCCCCce----EEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCC
Q 046451 247 LW-DMRNTMSPV----KEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPG 321 (719)
Q Consensus 247 lw-Dl~~~~~~~----~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~ 321 (719)
-| |++....+. +.++-....+.-+.=. ++.+-+++-..+|++.++.....+.+..-.. -..+.-+++||.+ .
T Consensus 294 QWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe-~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~-~~~~~~~~~Sp~~-~ 370 (733)
T COG4590 294 QWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPE-TNRKGFYSLYRNGTLQSFYSTSEKLLLFERA-YQAPQLVAMSPNQ-A 370 (733)
T ss_pred eeeeeecCCCCcceeeeccccCcccceeeccc-cccceEEEEcCCCceeeeecccCcceehhhh-hcCcceeeeCccc-c
Confidence 54 776554321 2222122233222222 2455677778888888887654444332222 2246678999998 5
Q ss_pred EEEEEeCCCcEEEEeCCCCccc
Q 046451 322 VISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 322 ~las~s~Dg~I~iwd~~~~~~~ 343 (719)
.|++-. .|+|+++.+++....
T Consensus 371 ~Ll~e~-~gki~~~~l~Nr~Pe 391 (733)
T COG4590 371 YLLSED-QGKIRLAQLENRNPE 391 (733)
T ss_pred hheeec-CCceEEEEecCCCCC
Confidence 666544 689999999987653
No 474
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=91.48 E-value=37 Score=40.52 Aligned_cols=183 Identities=13% Similarity=0.157 Sum_probs=100.9
Q ss_pred CCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCcc------ccCCCCCCCCceeeecc---ccCCEEEEEEe
Q 046451 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSL------ISSGETGGNPLIAHLSR---HKGPVRGLEFN 132 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~------~~~~~~~~~~~~~~l~~---h~~~V~~l~fs 132 (719)
.....|..|+|....... +...++|++= ....+.|+...-. ......-....+..+.. -.....+++|+
T Consensus 77 ~~~~PI~qI~fa~~~~~~-~~~~~~l~Vr-t~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~Fn 154 (765)
T PF10214_consen 77 DDGSPIKQIKFATLSESF-DEKSRWLAVR-TETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAFN 154 (765)
T ss_pred CCCCCeeEEEeccccccc-CCcCcEEEEE-cCCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEec
Confidence 466788888888221100 0011355444 4556777762111 00000101122333332 12366789999
Q ss_pred CCCCCEEEEEeCCCcEEEEcCCCCCCC--CccCCc---cCCC---CCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC
Q 046451 133 SFTPNLLASGADDGEICIWDLSAPAEP--SHFPPL---RGNG---SAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK 204 (719)
Q Consensus 133 p~~~~~lasgs~dg~I~iwdl~~~~~~--~~~~~l---~~~~---~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~ 204 (719)
|.+.+.||+.+..|...|||+...... ..+... .+.. ....+....|.|..+. +.|++++. ..+.++|++
T Consensus 155 P~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~-~~lLv~~r-~~l~~~d~~ 232 (765)
T PF10214_consen 155 PWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDS-NRLLVCNR-SKLMLIDFE 232 (765)
T ss_pred cCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCC-CEEEEEcC-CceEEEECC
Confidence 988889999999999999999221111 111001 1111 0111344578897775 35555554 468999999
Q ss_pred CCceeE-EecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC
Q 046451 205 KQKPVI-SFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN 252 (719)
Q Consensus 205 ~~~~~~-~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~ 252 (719)
+..... .........|..+.-+++....++.-+.. .|...|+..
T Consensus 233 ~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLTs~----eiiw~~~~~ 277 (765)
T PF10214_consen 233 SNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILTSK----EIIWLDVKS 277 (765)
T ss_pred CCCccchhccCCChhheeeEEecCCccceEEEEecC----eEEEEEccC
Confidence 876533 22224667899998888844444444444 488888876
No 475
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=91.44 E-value=0.75 Score=32.07 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=27.2
Q ss_pred CCeeEEEeCCCCC--CeEEEEeCCCcEEEEECCC
Q 046451 265 KGVIAMSWCPNDS--SYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 265 ~~V~~v~~sp~d~--~~l~sgs~Dg~I~iwd~~~ 296 (719)
+.|.++.|||..+ ++|+.+-.-|.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 3588999998555 6899998899999999985
No 476
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=91.32 E-value=14 Score=38.91 Aligned_cols=23 Identities=9% Similarity=0.088 Sum_probs=15.7
Q ss_pred CCCEEEEEeCCC----cEEEEcCCCCC
Q 046451 135 TPNLLASGADDG----EICIWDLSAPA 157 (719)
Q Consensus 135 ~~~~lasgs~dg----~I~iwdl~~~~ 157 (719)
++++++.|+.++ .+.+||..+.+
T Consensus 171 ~~~iYv~GG~~~~~~~~~~~yd~~~~~ 197 (323)
T TIGR03548 171 QNELYVFGGGSNIAYTDGYKYSPKKNQ 197 (323)
T ss_pred CCEEEEEcCCCCccccceEEEecCCCe
Confidence 567777777654 35688887754
No 477
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=91.06 E-value=0.63 Score=32.43 Aligned_cols=32 Identities=31% Similarity=0.430 Sum_probs=27.8
Q ss_pred CCEEEEEEeCCCC--CEEEEEeCCCcEEEEcCCC
Q 046451 124 GPVRGLEFNSFTP--NLLASGADDGEICIWDLSA 155 (719)
Q Consensus 124 ~~V~~l~fsp~~~--~~lasgs~dg~I~iwdl~~ 155 (719)
+.|.++.|+|..+ ++|+.+-..|.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 4789999998555 7999999999999999985
No 478
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.84 E-value=3.9 Score=43.64 Aligned_cols=134 Identities=13% Similarity=0.166 Sum_probs=81.4
Q ss_pred cCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCC
Q 046451 91 LVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGS 170 (719)
Q Consensus 91 s~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~ 170 (719)
...|.+.=|.+... ..+ ..+..-....++|.++.|++ |.+.||+--.|.+|.+++....+.... +.....
T Consensus 40 vrSggatgvvvkgp---ndD---VpiSfdm~d~G~I~SIkFSl-DnkilAVQR~~~~v~f~nf~~d~~~l~---~~~~ck 109 (657)
T KOG2377|consen 40 VRSGGATGVVVKGP---NDD---VPISFDMDDKGEIKSIKFSL-DNKILAVQRTSKTVDFCNFIPDNSQLE---YTQECK 109 (657)
T ss_pred EecCCeeEEEEeCC---CCC---CCceeeecCCCceeEEEecc-CcceEEEEecCceEEEEecCCCchhhH---HHHHhc
Confidence 34555666665321 111 33343444677999999999 889999999999999999855443322 222223
Q ss_pred CCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEe
Q 046451 171 AAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVAS 237 (719)
Q Consensus 171 ~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s 237 (719)
.....|....|.... -++..+..| +.+|.+...+...++-..+...|.=..|.++-.-.+++.+
T Consensus 110 ~k~~~IlGF~W~~s~--e~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~ 173 (657)
T KOG2377|consen 110 TKNANILGFCWTSST--EIAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTT 173 (657)
T ss_pred cCcceeEEEEEecCe--eEEEEecCC-eEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeecc
Confidence 344568999998773 455555444 5666554433222222256677777788888654444444
No 479
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=90.76 E-value=24 Score=37.17 Aligned_cols=200 Identities=14% Similarity=0.090 Sum_probs=0.0
Q ss_pred CCEEEEEEeCCCCCEEEEEeCCCc------EEEEcCCC-CCCCCccCCccCCCCCCCC---------CeEEEEecCCCCc
Q 046451 124 GPVRGLEFNSFTPNLLASGADDGE------ICIWDLSA-PAEPSHFPPLRGNGSAAQG---------EISFVSWNSKVQH 187 (719)
Q Consensus 124 ~~V~~l~fsp~~~~~lasgs~dg~------I~iwdl~~-~~~~~~~~~l~~~~~~h~~---------~I~~l~~sp~g~~ 187 (719)
+.+..|.+.+ ++..+++.+++|. ++.+++.. ......+............ ...+|++ +.++.
T Consensus 20 GGlSgl~~~~-~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~-~~~g~ 97 (326)
T PF13449_consen 20 GGLSGLDYDP-DDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAV-PPDGS 97 (326)
T ss_pred CcEeeEEEeC-CCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEE-ecCCC
Q ss_pred EEEEEeCC------CcEEEEECCCCceeEEe-------------cC-CCCCceeEEEECCCCCcEEEEEeCC--------
Q 046451 188 ILASTSYN------GTTVVWDLKKQKPVISF-------------SE-SIKRRCSVLQWNPDVATQLVVASDE-------- 239 (719)
Q Consensus 188 ~l~s~s~d------g~I~iwd~~~~~~~~~~-------------~~-~~~~~i~~l~~sp~g~~~l~~~s~d-------- 239 (719)
++++.-.+ ..|+.++.. ++.+..+ .. ..+..+.+|+++++|..++++.-..
T Consensus 98 ~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~ 176 (326)
T PF13449_consen 98 FWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRA 176 (326)
T ss_pred EEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCccc
Q ss_pred -------CCCCcEEEEecCC----CCCceEEeeC-----CCCCeeEEEeCCCCCCeEEEEeC-------CCcEEEEECCC
Q 046451 240 -------DSSPALRLWDMRN----TMSPVKEFVG-----HTKGVIAMSWCPNDSSYLLTCAK-------DNRTICWDTVS 296 (719)
Q Consensus 240 -------~~~~~I~lwDl~~----~~~~~~~~~~-----h~~~V~~v~~sp~d~~~l~sgs~-------Dg~I~iwd~~~ 296 (719)
- .|..||..+ ...-...+.. ....|..+.+-+ ++++|+.=-. ...|+..|+..
T Consensus 177 ~~~~~~~~---ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~-d~~lLvLER~~~~~~~~~~ri~~v~l~~ 252 (326)
T PF13449_consen 177 NPDNGSPL---RILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALP-DGRLLVLERDFSPGTGNYKRIYRVDLSD 252 (326)
T ss_pred ccccCceE---EEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEEC-CCcEEEEEccCCCCccceEEEEEEEccc
Q ss_pred C-------------------eEEEEecCC---CCCeEEeEEcC--CCCCEEEEEeCCC
Q 046451 297 G-------------------EIVSELPAG---TNWNFDIHWYP--KIPGVISASSFDG 330 (719)
Q Consensus 297 ~-------------------~~~~~l~~h---~~~v~~l~~sp--dg~~~las~s~Dg 330 (719)
. +.+..+..- .+.+..|+|-| +|...|+..++|+
T Consensus 253 at~~~~~~~l~~~~~~~~~k~ll~d~~~~g~~~dn~EGma~~p~~~g~~~l~lvsDnN 310 (326)
T PF13449_consen 253 ATDVPGIESLEGADIKPVKKELLFDLSPLGLPIDNFEGMAVGPRLDGRRTLYLVSDNN 310 (326)
T ss_pred ccccccccccccccccccccccccccccccCccCceeeEEEeeccCCCEEEEEEECCC
No 480
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=90.68 E-value=38 Score=39.30 Aligned_cols=288 Identities=15% Similarity=0.124 Sum_probs=130.3
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.....+..+.|+|||++++..+.++.. ...+|.+... . ....+...+....|++++.
T Consensus 57 ~~~~~~~~~~~spdg~~~~~~~~~~~~--------~~~l~l~~~~-g-------~~~~~~~~v~~~~~~~~g~------- 113 (620)
T COG1506 57 TFGGGVSELRWSPDGSVLAFVSTDGGR--------VAQLYLVDVG-G-------LITKTAFGVSDARWSPDGD------- 113 (620)
T ss_pred ccCCcccccccCCCCCEEEEEeccCCC--------cceEEEEecC-C-------ceeeeecccccceeCCCCC-------
Confidence 345678889999999999988755432 2244544432 1 1122456677888888873
Q ss_pred ceEEEE------cCCCc-------EEEEcCCcc-ccC-----CCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC
Q 046451 85 GLVAGG------LVDGS-------IDIWNPLSL-ISS-----GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD 145 (719)
Q Consensus 85 ~~lasg------s~dg~-------I~lwd~~~~-~~~-----~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d 145 (719)
.++.. ..++. +.+|..... ... ... ............+....++. +++.++....+
T Consensus 114 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~d~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 188 (620)
T COG1506 114 -RIAFLTAEGASKRDGGDHLFVDRLPVWFDGRGGERSDLYVVDIE---SKLIKLGLGNLDVVSFATDG-DGRLVASIRLD 188 (620)
T ss_pred -eEEEEecccccccCCceeeeecccceeecCCCCcccceEEEccC---cccccccCCCCceeeeeeCC-CCceeEEeeec
Confidence 33331 11222 233332111 000 000 01122222344555555555 35555554433
Q ss_pred Cc-------EEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC-------cEEEEECCCCceeEE
Q 046451 146 GE-------ICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG-------TTVVWDLKKQKPVIS 211 (719)
Q Consensus 146 g~-------I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg-------~I~iwd~~~~~~~~~ 211 (719)
.. ..++...++. ...+ ......+..+.|..++..+.+.+.... .+.+++.+.++....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 260 (620)
T COG1506 189 DDADPWVTNLYVLIEGNGE-LESL-------TPGEGSISKLAFDADGKSIALLGTESDRGLAEGDFILLLDGELGEVDGD 260 (620)
T ss_pred cccCCceEeeEEEecCCCc-eEEE-------cCCCceeeeeeeCCCCCeeEEeccCCccCccccceEEEEecccccccee
Confidence 32 2222221221 1111 112335778888888764555444433 234444222222221
Q ss_pred ecCCCC--CceeEEEECCCCCcEEEEEeC-CCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCC--
Q 046451 212 FSESIK--RRCSVLQWNPDVATQLVVASD-EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD-- 286 (719)
Q Consensus 212 ~~~~~~--~~i~~l~~sp~g~~~l~~~s~-d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~D-- 286 (719)
+. ... .....+.+.-++..+++++.. .+ ...++++...........+....|..+.+. ++.+++.-+..
T Consensus 261 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~l~~~~~~~~~~~~~~~~~~~v~~f~~~--~~~~~~~~s~~~~ 334 (620)
T COG1506 261 LS-SGDDTRGAWAVEGGLDGDGLLFIATDGGG---SSPLFRVDDLGGGVEGLSGDDGGVPGFDVD--GRKLALAYSSPTE 334 (620)
T ss_pred ec-cCCcccCcHHhccccCCCcEEEEEecCCC---ceEEEEEeccCCceeeecCCCceEEEEeeC--CCEEEEEecCCCC
Confidence 11 010 111112222333345555554 33 566766654333334444444566666652 33444444332
Q ss_pred -CcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCC-cEEEEeCC
Q 046451 287 -NRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDG-KIGIYNIE 338 (719)
Q Consensus 287 -g~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg-~I~iwd~~ 338 (719)
..+.+++. ++...........+....+..- ..+.--+.|| +|.-|-+.
T Consensus 335 p~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~--e~~~~~~~dG~~i~~~l~~ 384 (620)
T COG1506 335 PPEIYLYDR--GEEAKLTSSNNSGLKKVKLAEP--EPVTYKSNDGETIHGWLYK 384 (620)
T ss_pred ccceEEEcC--CCceEEeecccccccccccCCc--eEEEEEcCCCCEEEEEEec
Confidence 45777776 3333333333333444444433 3555555566 66666554
No 481
>KOG4849 consensus mRNA cleavage factor I subunit/CPSF subunit [RNA processing and modification]
Probab=90.67 E-value=22 Score=36.50 Aligned_cols=35 Identities=14% Similarity=0.340 Sum_probs=22.0
Q ss_pred hcCChhHHHhhee-------eeecCCcccchhHHHHHHHHHh
Q 046451 677 DNNDFGTALQIQV-------LLTTSDWDECNFWLATLKRMIK 711 (719)
Q Consensus 677 ~~~~~~~a~~i~~-------~l~~~~~~e~~~w~~g~k~li~ 711 (719)
.+|||..|.+--+ .--+.|=|-|...+.+||-.+.
T Consensus 385 SaGDy~~AiETllTAI~lIKqSrv~~DdRCrvLissL~dcLh 426 (498)
T KOG4849|consen 385 SAGDYKGAIETLLTAIQLIKQSRVGHDDRCRVLISSLEDCLH 426 (498)
T ss_pred ccccchhHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh
Confidence 4677776654322 2234556788888888887653
No 482
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=90.46 E-value=6.3 Score=37.80 Aligned_cols=135 Identities=13% Similarity=0.080 Sum_probs=69.1
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC-
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP- 164 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~- 164 (719)
+....-.+|.-.++|.++ . +++..+. ..+.=+.++. |+..|..++...+++.-|-++......+..
T Consensus 103 ~y~LTw~egvaf~~d~~t------~---~~lg~~~-y~GeGWgLt~---d~~~LimsdGsatL~frdP~tfa~~~~v~VT 169 (262)
T COG3823 103 FYQLTWKEGVAFKYDADT------L---EELGRFS-YEGEGWGLTS---DDKNLIMSDGSATLQFRDPKTFAELDTVQVT 169 (262)
T ss_pred EEEEEeccceeEEEChHH------h---hhhcccc-cCCcceeeec---CCcceEeeCCceEEEecCHHHhhhcceEEEE
Confidence 444455678888888733 2 3333333 2344455554 444566666666777777665544333210
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec-----------CCCCCceeEEEECCCCCcEE
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS-----------ESIKRRCSVLQWNPDVATQL 233 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~-----------~~~~~~i~~l~~sp~g~~~l 233 (719)
..+ ..-..++.+.|- +| .+.+-.-.+..|...|..+|+.+..+. ..+....+.|++.+++.+++
T Consensus 170 ~~g---~pv~~LNELE~V-dG-~lyANVw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~ 244 (262)
T COG3823 170 DDG---VPVSKLNELEWV-DG-ELYANVWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFL 244 (262)
T ss_pred ECC---eecccccceeee-cc-EEEEeeeeecceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEE
Confidence 011 011133334442 22 233333333445555555555544332 13455678899999987777
Q ss_pred EEEeC
Q 046451 234 VVASD 238 (719)
Q Consensus 234 ~~~s~ 238 (719)
++|-.
T Consensus 245 iTGK~ 249 (262)
T COG3823 245 ITGKL 249 (262)
T ss_pred EecCc
Confidence 77654
No 483
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=89.80 E-value=2.1 Score=46.35 Aligned_cols=92 Identities=16% Similarity=0.223 Sum_probs=60.0
Q ss_pred eeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCC-------------
Q 046451 118 HLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK------------- 184 (719)
Q Consensus 118 ~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~------------- 184 (719)
.+......+.+|..+| ++++.++.+.=|.|.++|+.+...++. +++.....-+.+....-...
T Consensus 302 ~l~D~~R~~~~i~~sP-~~~laA~tDslGRV~LiD~~~~~vvrm---WKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~ 377 (415)
T PF14655_consen 302 GLPDSKREGESICLSP-SGRLAAVTDSLGRVLLIDVARGIVVRM---WKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSR 377 (415)
T ss_pred eeccCCceEEEEEECC-CCCEEEEEcCCCcEEEEECCCChhhhh---hccCccceEEEEEeecccccccccccccCCCCc
Confidence 3444556788999999 688888888889999999999887766 44433222111111111110
Q ss_pred -CCcEEEEEeCCCcEEEEECCCCceeEEec
Q 046451 185 -VQHILASTSYNGTTVVWDLKKQKPVISFS 213 (719)
Q Consensus 185 -g~~~l~s~s~dg~I~iwd~~~~~~~~~~~ 213 (719)
...+++-.-.-|.|.||+++++..+..+.
T Consensus 378 ~~l~LvIyaprRg~lEvW~~~~g~Rv~a~~ 407 (415)
T PF14655_consen 378 FALFLVIYAPRRGILEVWSMRQGPRVAAFN 407 (415)
T ss_pred ceEEEEEEeccCCeEEEEecCCCCEEEEEE
Confidence 01134445668899999999988887776
No 484
>KOG4659 consensus Uncharacterized conserved protein (Rhs family) [Function unknown]
Probab=89.51 E-value=57 Score=39.85 Aligned_cols=25 Identities=12% Similarity=0.136 Sum_probs=18.6
Q ss_pred ceecCCCceeeeeCCcEEEEccCCC
Q 046451 359 KWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 359 ~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
+-++.+..++.++||.+++-+..+.
T Consensus 659 A~lnsp~alaVsPdg~v~IAD~gN~ 683 (1899)
T KOG4659|consen 659 AKLNSPYALAVSPDGDVIIADSGNS 683 (1899)
T ss_pred cccCCcceEEECCCCcEEEecCCch
Confidence 3466778899999999887765443
No 485
>PHA02790 Kelch-like protein; Provisional
Probab=89.46 E-value=12 Score=42.01 Aligned_cols=172 Identities=7% Similarity=-0.074 Sum_probs=83.3
Q ss_pred cEEEEEeCCC-----cEEEEECCCCceeEEecC-CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC-CceEE
Q 046451 187 HILASTSYNG-----TTVVWDLKKQKPVISFSE-SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM-SPVKE 259 (719)
Q Consensus 187 ~~l~s~s~dg-----~I~iwd~~~~~~~~~~~~-~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~-~~~~~ 259 (719)
.++++|+.++ .+..||.++++....-.. ........+. -++ .++++|+.++. .++..||..+.. ..+..
T Consensus 273 ~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~--~~~-~iYviGG~~~~-~sve~ydp~~n~W~~~~~ 348 (480)
T PHA02790 273 VVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVP--ANN-KLYVVGGLPNP-TSVERWFHGDAAWVNMPS 348 (480)
T ss_pred EEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEE--ECC-EEEEECCcCCC-CceEEEECCCCeEEECCC
Confidence 4667777543 577788887653322110 1111122222 233 57777776432 368889875431 11111
Q ss_pred eeCCCCCeeEEEeCCCCCCeEEEEeCCC---cEEEEECCCCeEEEE--ecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEE
Q 046451 260 FVGHTKGVIAMSWCPNDSSYLLTCAKDN---RTICWDTVSGEIVSE--LPAGTNWNFDIHWYPKIPGVISASSFDGKIGI 334 (719)
Q Consensus 260 ~~~h~~~V~~v~~sp~d~~~l~sgs~Dg---~I~iwd~~~~~~~~~--l~~h~~~v~~l~~spdg~~~las~s~Dg~I~i 334 (719)
+.........+.+ ++++.+.||.++ .+..||.++.+-... +....... +++ .-++ .+.+.|+ .+.+
T Consensus 349 l~~~r~~~~~~~~---~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~-~~~-~~~~-~IYv~GG---~~e~ 419 (480)
T PHA02790 349 LLKPRCNPAVASI---NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKS-CAL-VFGR-RLFLVGR---NAEF 419 (480)
T ss_pred CCCCCcccEEEEE---CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccc-eEE-EECC-EEEEECC---ceEE
Confidence 1111111122222 667778887653 477888876543321 11111111 121 2234 4666663 5677
Q ss_pred EeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCC
Q 046451 335 YNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKS 382 (719)
Q Consensus 335 wd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~ 382 (719)
||.++.+......- .. .+....+.-.+|++.+++..+
T Consensus 420 ydp~~~~W~~~~~m-------~~----~r~~~~~~v~~~~IYviGG~~ 456 (480)
T PHA02790 420 YCESSNTWTLIDDP-------IY----PRDNPELIIVDNKLLLIGGFY 456 (480)
T ss_pred ecCCCCcEeEcCCC-------CC----CccccEEEEECCEEEEECCcC
Confidence 88766554331110 11 111223456789999998644
No 486
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=89.35 E-value=1.9 Score=42.68 Aligned_cols=71 Identities=13% Similarity=0.101 Sum_probs=46.4
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCC-------CCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc
Q 046451 135 TPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGS-------AAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK 207 (719)
Q Consensus 135 ~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~-------~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~ 207 (719)
++++|++.+.+|.+++||+.+.+....-..+..... .....|..+.++.+|. -|++ -.+|..+.||..-+.
T Consensus 21 ~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~-PiV~-lsng~~y~y~~~L~~ 98 (219)
T PF07569_consen 21 NGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGV-PIVT-LSNGDSYSYSPDLGC 98 (219)
T ss_pred CCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCC-EEEE-EeCCCEEEeccccce
Confidence 578899999999999999998775432211111111 3455788888887763 4444 345778888876443
No 487
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=89.10 E-value=31 Score=35.93 Aligned_cols=59 Identities=10% Similarity=0.124 Sum_probs=37.0
Q ss_pred CEEEEEeCCCcEEEEcCCCC-CCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC
Q 046451 137 NLLASGADDGEICIWDLSAP-AEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK 204 (719)
Q Consensus 137 ~~lasgs~dg~I~iwdl~~~-~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~ 204 (719)
++|+.|+++|... .|+... .....+ .+...|+++.....-..+++.++....++++|+.
T Consensus 14 ~~lL~GTe~Gly~-~~~~~~~~~~~kl--------~~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~ 73 (302)
T smart00036 14 KWLLVGTEEGLYV-LNISDQPGTLEKL--------IGRRSVTQIWVLEENNVLLMISGKKPQLYSHPLS 73 (302)
T ss_pred cEEEEEeCCceEE-EEcccCCCCeEEe--------cCcCceEEEEEEhhhCEEEEEeCCcceEEEEEHH
Confidence 6899999988544 455542 112111 1344789999988764444445555569999984
No 488
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=88.82 E-value=5.2 Score=48.33 Aligned_cols=155 Identities=11% Similarity=0.229 Sum_probs=92.5
Q ss_pred EEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEE--------ECCCCCcEEEEEeCCCCCCcEEEE
Q 046451 177 SFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQ--------WNPDVATQLVVASDEDSSPALRLW 248 (719)
Q Consensus 177 ~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~--------~sp~g~~~l~~~s~d~~~~~I~lw 248 (719)
..+-+.|.=++..+ +-|..+.+|+.+++.....+. +....|..+. |.++=+++|+.++.-. |.|+
T Consensus 82 ~~mGiFpeI~RaWi--TiDn~L~lWny~~~~e~~~~d-~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~e----i~il 154 (1311)
T KOG1900|consen 82 TDMGIFPEIGRAWI--TIDNNLFLWNYESDNELAEYD-GLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVE----IVIL 154 (1311)
T ss_pred eeeccchhhcceEE--EeCCeEEEEEcCCCCcccccc-chhhhheeeeeecCCCCcchhhhheeEEecccce----EEEE
Confidence 33444444333333 457789999999977666666 4445555443 3445556777777664 6676
Q ss_pred ecCCCCC--ceEEe------eCCCCCeeEEEeCCCCCCeEEEEeCCCcEE--EEECCCC---e-E---------------
Q 046451 249 DMRNTMS--PVKEF------VGHTKGVIAMSWCPNDSSYLLTCAKDNRTI--CWDTVSG---E-I--------------- 299 (719)
Q Consensus 249 Dl~~~~~--~~~~~------~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~--iwd~~~~---~-~--------------- 299 (719)
-+..... ....+ ......|+++.... +|+.|++| .||.|+ +|...+| + +
T Consensus 155 gV~~~~~~~~~~~f~~~~~i~~dg~~V~~I~~t~-nGRIF~~G-~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvP 232 (1311)
T KOG1900|consen 155 GVSFDEFTGELSIFNTSFKISVDGVSVNCITYTE-NGRIFFAG-RDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVP 232 (1311)
T ss_pred EEEeccccCcccccccceeeecCCceEEEEEecc-CCcEEEee-cCCCEEEEEEeccCchhhcccccccCchhHHHHhhh
Confidence 5432211 11112 22245678888555 77766655 455433 2222221 1 0
Q ss_pred -EEEec-CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 300 -VSELP-AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 300 -~~~l~-~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
+..+. .+.+.|..+...... .++.+-++.|+|.+||+....
T Consensus 233 s~~~~~~~~~dpI~qi~ID~SR-~IlY~lsek~~v~~Y~i~~~G 275 (1311)
T KOG1900|consen 233 SLLSVPGSSKDPIRQITIDNSR-NILYVLSEKGTVSAYDIGGNG 275 (1311)
T ss_pred hhhcCCCCCCCcceeeEecccc-ceeeeeccCceEEEEEccCCC
Confidence 11122 456689999998887 799999999999999998843
No 489
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=88.49 E-value=50 Score=37.56 Aligned_cols=206 Identities=12% Similarity=0.072 Sum_probs=104.8
Q ss_pred EEEEEEeCCCCCEEEEE-----eCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC----
Q 046451 126 VRGLEFNSFTPNLLASG-----ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG---- 196 (719)
Q Consensus 126 V~~l~fsp~~~~~lasg-----s~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg---- 196 (719)
+-.++.++ |.+++|-+ +..-+++|-|+.++...... ..+....++|..++..++.+...++
T Consensus 131 Lg~~~~s~-D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~---------i~~~~~~~~Wa~d~~~lfYt~~d~~~rp~ 200 (682)
T COG1770 131 LGAASISP-DHNLLAYSVDVLGDEQYTLRFKDLATGEELPDE---------ITNTSGSFAWAADGKTLFYTRLDENHRPD 200 (682)
T ss_pred eeeeeeCC-CCceEEEEEecccccEEEEEEEecccccccchh---------hcccccceEEecCCCeEEEEEEcCCCCcc
Confidence 44566777 66666543 33457899999998764321 1224668899998876666665554
Q ss_pred cEEEEECCC--CceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCe-eEEEeC
Q 046451 197 TTVVWDLKK--QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGV-IAMSWC 273 (719)
Q Consensus 197 ~I~iwd~~~--~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V-~~v~~s 273 (719)
+|....+.+ ..-...+......-..+|.-+.+..+ |+....+.....+++.|.....-.-..+......+ ..+.-.
T Consensus 201 kv~~h~~gt~~~~d~lvyeE~d~~f~~~v~~s~s~~y-i~i~~~~~~tsE~~ll~a~~p~~~p~vv~pr~~g~eY~~eh~ 279 (682)
T COG1770 201 KVWRHRLGTPGSSDELVYEEKDDRFFLSVGRSRSEAY-IVISLGSHITSEVRLLDADDPEAEPKVVLPRENGVEYSVEHG 279 (682)
T ss_pred eEEEEecCCCCCcceEEEEcCCCcEEEEeeeccCCce-EEEEcCCCcceeEEEEecCCCCCceEEEEEcCCCcEEeeeec
Confidence 222223333 22222333223333344444444444 44444343344788888876543222222111111 222211
Q ss_pred CCCCCeEEEEeCCC-cEEEEECCC---CeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCC--cEEEEeCCCCcccc
Q 046451 274 PNDSSYLLTCAKDN-RTICWDTVS---GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDG--KIGIYNIEGCSRYG 344 (719)
Q Consensus 274 p~d~~~l~sgs~Dg-~I~iwd~~~---~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg--~I~iwd~~~~~~~~ 344 (719)
+..+++-...+| ..+|+.... .+.-.++-.|...+.--.|+--...+++....++ +|++++..+++...
T Consensus 280 --~d~f~i~sN~~gknf~l~~ap~~~~~~~w~~~I~h~~~~~l~~~~~f~~~lVl~eR~~glp~v~v~~~~~~~~~~ 354 (682)
T COG1770 280 --GDRFYILSNADGKNFKLVRAPVSADKSNWRELIPHREDVRLEGVDLFADHLVLLERQEGLPRVVVRDRKTGEERG 354 (682)
T ss_pred --CcEEEEEecCCCcceEEEEccCCCChhcCeeeeccCCCceeeeeeeeccEEEEEecccCCceEEEEecCCCceee
Confidence 223344444444 445554322 2223344456655555555555534666666554 78888888766544
No 490
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=88.41 E-value=40 Score=36.25 Aligned_cols=194 Identities=13% Similarity=0.037 Sum_probs=96.8
Q ss_pred CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCC
Q 046451 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSES 215 (719)
Q Consensus 136 ~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~ 215 (719)
...+..+..+|.|.-.|..+...+....... ....+..-.+..+| .|+.++.+|.++.+|.++++.+..+...
T Consensus 68 dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~-----~~~~~~~~~~~~~G--~i~~g~~~g~~y~ld~~~G~~~W~~~~~ 140 (370)
T COG1520 68 DGTVYVGTRDGNIFALNPDTGLVKWSYPLLG-----AVAQLSGPILGSDG--KIYVGSWDGKLYALDASTGTLVWSRNVG 140 (370)
T ss_pred CCeEEEecCCCcEEEEeCCCCcEEecccCcC-----cceeccCceEEeCC--eEEEecccceEEEEECCCCcEEEEEecC
Confidence 3455666888888888888877543221111 01122222222355 4788899999999999999988888732
Q ss_pred CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCC---CCCeeEEEeCCCCCCeEEEEeC--CCcEE
Q 046451 216 IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGH---TKGVIAMSWCPNDSSYLLTCAK--DNRTI 290 (719)
Q Consensus 216 ~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h---~~~V~~v~~sp~d~~~l~sgs~--Dg~I~ 290 (719)
....+..-..-.++ .++..+.++ .+...|..++.. +-..... ...+..--.. ....++.+.. ++.+.
T Consensus 141 ~~~~~~~~~v~~~~--~v~~~s~~g---~~~al~~~tG~~-~W~~~~~~~~~~~~~~~~~~--~~~~vy~~~~~~~~~~~ 212 (370)
T COG1520 141 GSPYYASPPVVGDG--TVYVGTDDG---HLYALNADTGTL-KWTYETPAPLSLSIYGSPAI--ASGTVYVGSDGYDGILY 212 (370)
T ss_pred CCeEEecCcEEcCc--EEEEecCCC---eEEEEEccCCcE-EEEEecCCccccccccCcee--ecceEEEecCCCcceEE
Confidence 20112222222232 333333444 566666554422 1111110 0011100001 2234455544 66777
Q ss_pred EEECCCCeEEEEecCCCC----CeEEeEEcCCC----CCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 291 CWDTVSGEIVSELPAGTN----WNFDIHWYPKI----PGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 291 iwd~~~~~~~~~l~~h~~----~v~~l~~spdg----~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
-+|..+|+.+...+.+.. .+........+ ..-+..++.++.+...|..+++..-
T Consensus 213 a~~~~~G~~~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~~G~~~W 274 (370)
T COG1520 213 ALNAEDGTLKWSQKVSQTIGRTAISTTPAVDGGPVYVDGGVYAGSYGGKLLCLDADTGELIW 274 (370)
T ss_pred EEEccCCcEeeeeeeecccCcccccccccccCceEEECCcEEEEecCCeEEEEEcCCCceEE
Confidence 778888887766432111 11001111111 0123556667778888888877654
No 491
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=88.35 E-value=2.7 Score=41.53 Aligned_cols=67 Identities=16% Similarity=0.111 Sum_probs=52.0
Q ss_pred CCCeEEEEeCCCcEEEEECCCCeEEEEe-------c-------CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 276 DSSYLLTCAKDNRTICWDTVSGEIVSEL-------P-------AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 276 d~~~l~sgs~Dg~I~iwd~~~~~~~~~l-------~-------~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
++.+|++-+.+|.+++||+.+++.+..- . .....|..+.++.+| .-|++-+ +|..+.|+.+-+.
T Consensus 21 ~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G-~PiV~ls-ng~~y~y~~~L~~ 98 (219)
T PF07569_consen 21 NGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNG-VPIVTLS-NGDSYSYSPDLGC 98 (219)
T ss_pred CCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCC-CEEEEEe-CCCEEEeccccce
Confidence 5688999999999999999988765432 1 244568999999888 6666666 6889999988776
Q ss_pred ccc
Q 046451 342 RYG 344 (719)
Q Consensus 342 ~~~ 344 (719)
...
T Consensus 99 W~~ 101 (219)
T PF07569_consen 99 WIR 101 (219)
T ss_pred eEE
Confidence 655
No 492
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=87.92 E-value=29 Score=39.11 Aligned_cols=235 Identities=14% Similarity=0.115 Sum_probs=99.0
Q ss_pred CccceEEEcCCC-CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCC---Cc
Q 046451 8 NRSASVAFAPDA-PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSED---FS 83 (719)
Q Consensus 8 ~~V~~vafSpdg-~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~---~~ 83 (719)
...+++.+-.+| .+|++|+..|. +. ++.+. ...+.+......-+.|.+++.......... ..
T Consensus 256 ~~~s~l~~l~~g~d~lf~gs~~gd--------s~--l~~~~----~~~l~~~~~~~N~~Pi~D~~v~~~~~~~~~~~~~~ 321 (504)
T PF10433_consen 256 SIASSLTYLKNGGDYLFVGSEFGD--------SQ--LLQIS----LSNLEVLDSLPNWGPIVDFCVVDSSNSGQPSNPSS 321 (504)
T ss_dssp S-ESEEEEESTT--EEEEEESSS---------EE--EEEEE----SESEEEEEEE----SEEEEEEE-TSSSSS------
T ss_pred ChhheEEEEcCCCEEEEEEEecCC--------cE--EEEEe----CCCcEEEEeccCcCCccceEEeccccCCCCccccc
Confidence 334566666665 46777766553 22 33333 224445555667788888888643211100 00
Q ss_pred cceEEEEc--CCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCC---CCC
Q 046451 84 LGLVAGGL--VDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA---PAE 158 (719)
Q Consensus 84 ~~~lasgs--~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~---~~~ 158 (719)
.+++++++ .+|.+++..-.-.. ++ .......+.+ -..++.+.....+..+|+.+..+ .-+|+.+.. .+.
T Consensus 322 ~~lv~~sG~g~~gsL~~lr~Gi~~---~~-~~~~~~~l~~-v~~iW~l~~~~~~~~~lv~S~~~-~T~vl~~~~~d~~e~ 395 (504)
T PF10433_consen 322 DQLVACSGAGKRGSLRILRNGIGI---EG-LELASSELPG-VTGIWTLKLSSSDHSYLVLSFPN-ETRVLQISEGDDGEE 395 (504)
T ss_dssp -EEEEEESSGGG-EEEEEEESBEE---E---EEEEEEEST-EEEEEEE-SSSSSBSEEEEEESS-EEEEEEES----SSE
T ss_pred ceEEEEECcCCCCcEEEEeccCCc---ee-eeeeccCCCC-ceEEEEeeecCCCceEEEEEcCC-ceEEEEEecccCCcc
Confidence 03344433 56888888641000 00 0011111221 23445555433234566666554 455565542 221
Q ss_pred CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeC
Q 046451 159 PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASD 238 (719)
Q Consensus 159 ~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~ 238 (719)
...+. .. ........+.+-.+. + ..++=.+.. .|++.+....+............|.+.+++.. +++.+..
T Consensus 396 ~~e~~-~~-~f~~~~~Tl~~~~~~-~--~~ivQVt~~-~i~l~~~~~~~~~~~w~~~~~~~I~~a~~~~~---~v~v~~~ 466 (504)
T PF10433_consen 396 VEEVE-ED-GFDTDEPTLAAGNVG-D--GRIVQVTPK-GIRLIDLEDGKLTQEWKPPAGSIIVAASINDP---QVLVALS 466 (504)
T ss_dssp EEEE-----TS-SSS-EEEEEEET-T--TEEEEEESS-EEEEEESSSTSEEEEEE-TTS---SEEEESSS---EEEEEE-
T ss_pred hhhhh-hc-cCCCCCCCeEEEEcC-C--CeEEEEecC-eEEEEECCCCeEEEEEeCCCCCeEEEEEECCC---EEEEEEe
Confidence 11100 00 011111233333333 2 244444444 48889888777776654345666666666643 3444444
Q ss_pred CCCCCcEEEEecCCCCCceEEeeC----CCCCeeEEEeCC
Q 046451 239 EDSSPALRLWDMRNTMSPVKEFVG----HTKGVIAMSWCP 274 (719)
Q Consensus 239 d~~~~~I~lwDl~~~~~~~~~~~~----h~~~V~~v~~sp 274 (719)
++ .+.++.++........... ....|.|+..+|
T Consensus 467 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~eis~l~i~p 503 (504)
T PF10433_consen 467 GG---ELVYFELDDNKISVSDNDETILELDNEISCLSIEP 503 (504)
T ss_dssp TT---EEEEEEEETTEEEEEEE----EE-SS-EEEEE---
T ss_pred CC---cEEEEEEECCceeeeeeccccccCCCceEEEEeCC
Confidence 54 6888887654222222211 356777877665
No 493
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=87.69 E-value=33 Score=38.37 Aligned_cols=179 Identities=14% Similarity=0.070 Sum_probs=84.9
Q ss_pred CCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCC---CeeEE
Q 046451 194 YNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTK---GVIAM 270 (719)
Q Consensus 194 ~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~---~V~~v 270 (719)
..+.+.++|.+ |..+..+.. .......+...++|. +++ +... .++.+|+.. +.+..+..... --.++
T Consensus 126 ~~~~~~~iD~~-G~Vrw~~~~-~~~~~~~~~~l~nG~-ll~-~~~~----~~~e~D~~G--~v~~~~~l~~~~~~~HHD~ 195 (477)
T PF05935_consen 126 SSSYTYLIDNN-GDVRWYLPL-DSGSDNSFKQLPNGN-LLI-GSGN----RLYEIDLLG--KVIWEYDLPGGYYDFHHDI 195 (477)
T ss_dssp BEEEEEEEETT-S-EEEEE-G-GGT--SSEEE-TTS--EEE-EEBT----EEEEE-TT----EEEEEE--TTEE-B-S-E
T ss_pred CCceEEEECCC-ccEEEEEcc-CccccceeeEcCCCC-EEE-ecCC----ceEEEcCCC--CEEEeeecCCccccccccc
Confidence 34556666654 444444431 111111166677873 343 3333 688888853 33333322111 12456
Q ss_pred EeCCCCCCeEEEEeC-------------CCcEEEEECCCCeEEEEec--CC-----------------------C--CCe
Q 046451 271 SWCPNDSSYLLTCAK-------------DNRTICWDTVSGEIVSELP--AG-----------------------T--NWN 310 (719)
Q Consensus 271 ~~sp~d~~~l~sgs~-------------Dg~I~iwd~~~~~~~~~l~--~h-----------------------~--~~v 310 (719)
.+-+ +|++|+.+.. +..|..+| .+|+.+.++. .| . -.+
T Consensus 196 ~~l~-nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~ 273 (477)
T PF05935_consen 196 DELP-NGNLLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHI 273 (477)
T ss_dssp EE-T-TS-EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--E
T ss_pred EECC-CCCEEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCcccc
Confidence 6777 7888887772 22466667 7777766542 11 0 146
Q ss_pred EEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc-cCCCCCCCCC-------------------ccCcceecCCCceeee
Q 046451 311 FDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG-VGDSNFSAAP-------------------LRAPKWYKRPAGASFG 370 (719)
Q Consensus 311 ~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~-~~~~~~~~~~-------------------~~~p~w~~~~~~~s~s 370 (719)
.++.+.+.+..+|+|+-.-..|...|..++++.- .+.+...... .....|...-..+.+-
T Consensus 274 Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~~~w~~~~~~~ll~~vd~~G~~~~~~~~~~~~~~gQH~~~~~ 353 (477)
T PF05935_consen 274 NSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPPGGWNGTYQDYLLTPVDSNGNPIDCGDGDFDWFWGQHTAHLI 353 (477)
T ss_dssp EEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-STT--TTTGGGB-EEB-TTS-B-EBSSSS----SS-EEEEE-
T ss_pred CccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCCCCCCCcccchheeeeeccCCceeeccCCCCcccccccceEEc
Confidence 8899988554677777767788888888887653 2222222111 0122355555567777
Q ss_pred eCC---cEEEEccCCCC
Q 046451 371 FGG---KLVSFHPKSSA 384 (719)
Q Consensus 371 ~~G---klv~~~~~~~~ 384 (719)
.+| .|++|++....
T Consensus 354 ~~g~~~~l~vFDNg~~r 370 (477)
T PF05935_consen 354 PDGPQGNLLVFDNGNGR 370 (477)
T ss_dssp TTS---SEEEEE--TTG
T ss_pred CCCCeEEEEEEECCCCC
Confidence 888 89999987664
No 494
>KOG0260 consensus RNA polymerase II, large subunit [Transcription]
Probab=87.37 E-value=33 Score=41.30 Aligned_cols=11 Identities=9% Similarity=0.265 Sum_probs=7.1
Q ss_pred cEEEEeCCCCc
Q 046451 331 KIGIYNIEGCS 341 (719)
Q Consensus 331 ~I~iwd~~~~~ 341 (719)
.+..|++++..
T Consensus 1273 ~~~ew~LeTdg 1283 (1605)
T KOG0260|consen 1273 PVDEWDLETDG 1283 (1605)
T ss_pred ecceeEEecCc
Confidence 45678877643
No 495
>PLN02153 epithiospecifier protein
Probab=87.30 E-value=39 Score=35.83 Aligned_cols=12 Identities=8% Similarity=0.232 Sum_probs=8.9
Q ss_pred CcEEEEcCCCCC
Q 046451 146 GEICIWDLSAPA 157 (719)
Q Consensus 146 g~I~iwdl~~~~ 157 (719)
..|.+||+.+.+
T Consensus 217 ~~v~~yd~~~~~ 228 (341)
T PLN02153 217 NAVQFFDPASGK 228 (341)
T ss_pred CceEEEEcCCCc
Confidence 468889987754
No 496
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=87.23 E-value=34 Score=40.63 Aligned_cols=194 Identities=13% Similarity=0.141 Sum_probs=104.7
Q ss_pred EEEEEeCCCcEEEEcCCCCCCCCccCCcc-CCCCCCCCCeEEEEec--CCCCcEEEEEeC--CCcEEEEECCC--C----
Q 046451 138 LLASGADDGEICIWDLSAPAEPSHFPPLR-GNGSAAQGEISFVSWN--SKVQHILASTSY--NGTTVVWDLKK--Q---- 206 (719)
Q Consensus 138 ~lasgs~dg~I~iwdl~~~~~~~~~~~l~-~~~~~h~~~I~~l~~s--p~g~~~l~s~s~--dg~I~iwd~~~--~---- 206 (719)
-+++...+|.|++|-.+............ .......+.|+..++. .+|..+|+++.. .+.|++|.+.- +
T Consensus 64 A~i~Vt~nG~l~l~yQ~~~~~~~~~s~~el~s~~~s~~~ithAsi~~~~~g~~ili~t~s~~s~~l~~yrv~I~W~~~~~ 143 (753)
T PF11635_consen 64 ACIAVTRNGLLKLWYQKPDGQWNESSTAELESLGSSDDLITHASIAPSDNGKSILIATYSSLSKQLRFYRVQIDWNAKPQ 143 (753)
T ss_pred EEEEEecCCeEEEEEEcCCCccceeehhhhccccccccceeeceeeecCCCCEEEEEEccccCCceEEEEEEEeccCcCc
Confidence 45666778999999874333332211000 0011234456655554 555434444333 47788765421 0
Q ss_pred ---c---eeEEecCC--------------------CCCceeEEEECC------CCCcEEEEEeCCC-CCCcEEEEecCCC
Q 046451 207 ---K---PVISFSES--------------------IKRRCSVLQWNP------DVATQLVVASDED-SSPALRLWDMRNT 253 (719)
Q Consensus 207 ---~---~~~~~~~~--------------------~~~~i~~l~~sp------~g~~~l~~~s~d~-~~~~I~lwDl~~~ 253 (719)
. +...+... .-..++.+.|-+ ....++++.+..+ ....|.-|.++..
T Consensus 144 ~~d~q~~PSl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~LthL~ils~~~~~~~~p~Ili~~~~~~~~~SiI~RweL~~~ 223 (753)
T PF11635_consen 144 QIDPQKLPSLFLSHIADETPKDVDPTGWGDPSPDNSMYQLTHLEILSPTPDKDSAPEILIVYSSPNTPSSIIERWELREE 223 (753)
T ss_pred cCCCCcCCeEEEEeccccccccccCccccccCcccccccceeEEEeccCCCCCCCCeEEEEEEcCCCCCcEEEEEEEEcc
Confidence 0 11111110 113555666654 2223444443222 2347999998754
Q ss_pred CCceEEe--------------------e-----CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEe----c
Q 046451 254 MSPVKEF--------------------V-----GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSEL----P 304 (719)
Q Consensus 254 ~~~~~~~--------------------~-----~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l----~ 304 (719)
...++.. . ...+.|.+++... -+.+|+..-.||+|.++|..+.+.+... .
T Consensus 224 ~~~lh~~F~ql~s~~~~~~~~~~~~~l~~~~~i~~~~~V~si~~~~-~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~ 302 (753)
T PF11635_consen 224 QQPLHPAFQQLGSKKNSSSEPPPTYRLRRLDDITLNKRVVSITSPE-LDIVVAFAFSDGSIEFRDRNTMKELNETRTNGE 302 (753)
T ss_pred CcccchhhhhcCCCCcCCCCCCCceeEEEecccccCCeEEEEEecc-cCcEEEEEEcCCeEEEEecCcchhhcccccccC
Confidence 3222211 0 1124566777665 5678899999999999999887655444 1
Q ss_pred CC---------------CCCeEEeEEcCCCCCEEEEEeCCCcEE
Q 046451 305 AG---------------TNWNFDIHWYPKIPGVISASSFDGKIG 333 (719)
Q Consensus 305 ~h---------------~~~v~~l~~spdg~~~las~s~Dg~I~ 333 (719)
.. ...+..++|||.+ ..++.-..||.+.
T Consensus 303 ~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~-c~~v~~~~~~~~~ 345 (753)
T PF11635_consen 303 PPNTVTSLFQAGFHFPCIQPPLHVAFSPTM-CSLVQIDEDGKTK 345 (753)
T ss_pred CccccccccccccccccCCCCceEEECccc-ceEEEEecCCCce
Confidence 10 1123347899998 7888888888866
No 497
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=87.13 E-value=5.2 Score=43.46 Aligned_cols=106 Identities=21% Similarity=0.181 Sum_probs=0.0
Q ss_pred EEEeCCCCCCcEEEEecCCCCCceEEeeCCCCC---------------------eeEEEeCCCCCCeEEEEeCCCcEEEE
Q 046451 234 VVASDEDSSPALRLWDMRNTMSPVKEFVGHTKG---------------------VIAMSWCPNDSSYLLTCAKDNRTICW 292 (719)
Q Consensus 234 ~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~---------------------V~~v~~sp~d~~~l~sgs~Dg~I~iw 292 (719)
+..+.++ .++.||-+...-.+..+.+..+. |..+..++ .|..++-.|.+|.+.++
T Consensus 55 ~~~~~gD---~lf~Wd~~ds~Llv~~lR~~~~~~~~~a~~q~q~l~P~~~V~feV~~vl~s~-~GS~VaL~G~~Gi~vMe 130 (741)
T KOG4460|consen 55 VVFGLGD---ELFLWDGEDSSLLVVRLRGPSGGGEEPALSQYQRLLPINPVLFEVYQVLLSP-TGSHVALIGIKGLMVME 130 (741)
T ss_pred hhcccCC---EEEEEecCcceEEEEEeccCCCCcccccccccceeccCCcceEEEEEEEecC-CCceEEEecCCeeEEEE
Q ss_pred ECCCCeEEEEecCCCCCeEE--------------------eEEcCCC--CCEEEEEeCCCcEEEEeCCCCccc
Q 046451 293 DTVSGEIVSELPAGTNWNFD--------------------IHWYPKI--PGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 293 d~~~~~~~~~l~~h~~~v~~--------------------l~~spdg--~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
=.+..-.-..++.....|+| ++|+|+. ...|..-+.|..|+|||+..-+.+
T Consensus 131 Lp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 131 LPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred chhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEEEEecCcEEEEEecCCcchh
No 498
>KOG1923 consensus Rac1 GTPase effector FRL [Signal transduction mechanisms; Cytoskeleton]
Probab=86.79 E-value=13 Score=42.36 Aligned_cols=11 Identities=9% Similarity=0.362 Sum_probs=6.3
Q ss_pred chhHHHHHHHH
Q 046451 699 CNFWLATLKRM 709 (719)
Q Consensus 699 ~~~w~~g~k~l 709 (719)
-..||.+++++
T Consensus 510 edkFml~lskI 520 (830)
T KOG1923|consen 510 EDKFMLSLSKI 520 (830)
T ss_pred chhhhhhhhhh
Confidence 33466666665
No 499
>KOG1983 consensus Tomosyn and related SNARE-interacting proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=86.79 E-value=19 Score=44.04 Aligned_cols=246 Identities=12% Similarity=0.051 Sum_probs=0.0
Q ss_pred ccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccC---
Q 046451 48 FQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKG--- 124 (719)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~--- 124 (719)
.......+.-....+.......++|++.- ++++.++.+|.|++|-. ..+.....|..
T Consensus 19 ~~~~~f~~~~~~~~G~~~~~~~~afD~~q--------~llai~t~tg~i~~yg~------------~~ve~~~~~~~~~~ 78 (993)
T KOG1983|consen 19 LKNDLFAFDKTNRHGFPSTPSALAFDPTQ--------GLLAIGTRTGAIKIYGQ------------PGVEFVGLHPKQNQ 78 (993)
T ss_pred ccchhcccccceecCCCCCCcceeecccc--------ceEEEEEecccEEEecc------------cceEEEeccccccc
Q ss_pred -CEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEEC
Q 046451 125 -PVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDL 203 (719)
Q Consensus 125 -~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~ 203 (719)
.+..+.|.. ....+.....+..+.+|.......... .-...+|.-++.-.++.+ .++.+++||.
T Consensus 79 ~~~~~~~~~~-~~s~~~~l~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~g-~~~~~~~~~~ 143 (993)
T KOG1983|consen 79 INVTRIELLV-GISRNLVLSDDDSLHLWSIKIKTGVFL-------------KQEITSFVTDPPPDWLIG-ENGLVKVSDV 143 (993)
T ss_pred hhhhheeeee-cccccceeecccceeeecccccceeec-------------CCcceeccCCCCcchhcc-cCceeeEeee
Q ss_pred CCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEE
Q 046451 204 KKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC 283 (719)
Q Consensus 204 ~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sg 283 (719)
.-.....-...............-.-...+..--.+- .-.+|-+.. .. ..+..+...+.+..+. ...-++.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~---~~~~~~~~~--~~-~~~~~~~~~~~~~~~~--~~~~~~~~ 215 (993)
T KOG1983|consen 144 LRHQLSDLKYAGTESSNFVPYESLSPTLSIEGLVIDL---DTVLISLPD--AY-LGLSLIEYESLQVLYY--SPTKILIG 215 (993)
T ss_pred chhhhccceeccccccccceeeeeccceeeecccccc---ccceeeccc--cc-ccccccccccceeeee--cCCCccee
Q ss_pred eCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 284 AKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 284 s~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
...+.+.+|+.........+....... +.++ ..++++..||.+.+||+..+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~v~~h~Dgs~~fWd~s~g~~ 268 (993)
T KOG1983|consen 216 FNRGLVVIKDRASKYVQSAYLPNGQLE-----SRDG-SHFVSYHTDGSYAFWDVSSGKL 268 (993)
T ss_pred eeeeeeeehhcccccchhhcccccccC-----ccCC-ceEEEEEecCCEEeeecCCCce
No 500
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=86.62 E-value=56 Score=36.06 Aligned_cols=165 Identities=9% Similarity=0.051 Sum_probs=0.0
Q ss_pred eeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCC-----CcEEE
Q 046451 116 IAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKV-----QHILA 190 (719)
Q Consensus 116 ~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g-----~~~l~ 190 (719)
+..+...-..-+.|+|.+ ++++|++--..|.|++++-.+.........-.............|+++|+. ..+|.
T Consensus 22 ~~~va~GL~~Pw~maflP-DG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lY 100 (454)
T TIGR03606 22 KKVLLSGLNKPWALLWGP-DNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVY 100 (454)
T ss_pred EEEEECCCCCceEEEEcC-CCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEE
Q ss_pred EEe----------CCCcEEEEECC--------CCceeEEecCCCCCceeEEEECCCCCcEEEEEeC--------------
Q 046451 191 STS----------YNGTTVVWDLK--------KQKPVISFSESIKRRCSVLQWNPDVATQLVVASD-------------- 238 (719)
Q Consensus 191 s~s----------~dg~I~iwd~~--------~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~-------------- 238 (719)
... ....|.-|.+. ....+..+.......-..|.|.+||..++.+|..
T Consensus 101 vsyt~~~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs~GD~g~~~~~n~~~~~~a 180 (454)
T TIGR03606 101 ISYTYKNGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYTIGEQGRNQGANFFLPNQA 180 (454)
T ss_pred EEEeccCCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCcEEEEECCCCCCCcccccCcchh
Q ss_pred ------------CCCCCcEEEEecCCCCC-----------ceEEeeCCCCCeeEEEeCCCCCCeEEE
Q 046451 239 ------------EDSSPALRLWDMRNTMS-----------PVKEFVGHTKGVIAMSWCPNDSSYLLT 282 (719)
Q Consensus 239 ------------d~~~~~I~lwDl~~~~~-----------~~~~~~~h~~~V~~v~~sp~d~~~l~s 282 (719)
|-....=+|+.++.... .-..+.--......++|.| ++.++++
T Consensus 181 Q~~~~~~~~~~~d~~~~~GkILRin~DGsiP~dNPf~~g~~~eIyA~G~RNp~Gla~dp-~G~Lw~~ 246 (454)
T TIGR03606 181 QHTPTQQELNGKDYHAYMGKVLRLNLDGSIPKDNPSINGVVSHIFTYGHRNPQGLAFTP-DGTLYAS 246 (454)
T ss_pred ccccccccccccCcccCceEEEEEcCCCCCCCCCCccCCCcceEEEEeccccceeEECC-CCCEEEE
Done!