Query 046451
Match_columns 719
No_of_seqs 951 out of 3629
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 21:37:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046451.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046451hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pm9_A Protein WEB1, protein t 100.0 7.3E-43 2.5E-47 381.0 38.5 364 1-384 6-406 (416)
2 4gqb_B Methylosome protein 50; 100.0 5.3E-42 1.8E-46 365.8 38.2 304 7-343 30-335 (344)
3 4g56_B MGC81050 protein; prote 100.0 1.3E-40 4.4E-45 357.2 35.7 304 6-341 41-345 (357)
4 1vyh_C Platelet-activating fac 100.0 1.8E-40 6.1E-45 363.1 36.6 286 5-338 106-410 (410)
5 3ow8_A WD repeat-containing pr 100.0 9.3E-40 3.2E-44 345.2 37.8 287 5-338 30-320 (321)
6 1nr0_A Actin interacting prote 100.0 3.9E-39 1.3E-43 371.0 43.4 376 5-406 57-594 (611)
7 2ynn_A Coatomer subunit beta'; 100.0 2.6E-39 9E-44 338.9 35.4 291 5-340 11-303 (304)
8 3iz6_a 40S ribosomal protein R 100.0 2.7E-39 9.4E-44 349.9 33.7 302 6-342 65-378 (380)
9 1got_B GT-beta; complex (GTP-b 100.0 1.3E-38 4.6E-43 339.1 37.8 285 6-336 54-340 (340)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 1E-38 3.5E-43 340.7 36.1 297 9-344 18-340 (345)
11 2pbi_B Guanine nucleotide-bind 100.0 4.1E-38 1.4E-42 337.3 38.9 290 5-336 62-354 (354)
12 1nr0_A Actin interacting prote 100.0 1.5E-37 5.1E-42 357.8 46.1 290 6-344 17-360 (611)
13 1erj_A Transcriptional repress 100.0 9.8E-38 3.3E-42 339.3 36.7 294 4-340 61-390 (393)
14 4ery_A WD repeat-containing pr 100.0 3.4E-37 1.2E-41 323.5 37.4 287 5-338 21-311 (312)
15 3frx_A Guanine nucleotide-bind 100.0 8.1E-37 2.8E-41 322.3 38.2 290 5-340 15-318 (319)
16 2xzm_R RACK1; ribosome, transl 100.0 2.6E-36 8.9E-41 321.7 38.8 294 5-341 19-342 (343)
17 2hes_X YDR267CP; beta-propelle 100.0 1.8E-36 6.3E-41 321.1 36.5 299 6-339 13-328 (330)
18 2ynn_A Coatomer subunit beta'; 100.0 4E-36 1.4E-40 314.6 37.1 254 61-345 10-265 (304)
19 4gqb_B Methylosome protein 50; 100.0 2.5E-36 8.5E-41 321.9 33.8 297 63-382 29-331 (344)
20 1vyh_C Platelet-activating fac 100.0 6.1E-36 2.1E-40 327.1 37.1 284 61-379 105-408 (410)
21 2ymu_A WD-40 repeat protein; u 100.0 1.3E-35 4.5E-40 338.5 40.9 351 6-407 15-399 (577)
22 2ymu_A WD-40 repeat protein; u 100.0 2.3E-35 8E-40 336.4 42.8 343 6-407 220-563 (577)
23 4aow_A Guanine nucleotide-bind 100.0 3E-35 1E-39 311.3 40.3 292 6-341 37-339 (340)
24 3iz6_a 40S ribosomal protein R 100.0 5.3E-36 1.8E-40 324.1 35.0 306 60-395 62-379 (380)
25 4g56_B MGC81050 protein; prote 100.0 3.8E-36 1.3E-40 322.5 33.2 327 10-383 8-344 (357)
26 3ow8_A WD repeat-containing pr 100.0 5.4E-36 1.9E-40 316.3 33.5 258 60-345 28-285 (321)
27 1gxr_A ESG1, transducin-like e 100.0 7.8E-35 2.7E-39 307.1 40.1 289 4-338 48-336 (337)
28 1r5m_A SIR4-interacting protei 100.0 1.8E-35 6.2E-40 322.3 35.8 297 5-341 43-363 (425)
29 1sq9_A Antiviral protein SKI8; 100.0 5.6E-35 1.9E-39 316.6 35.0 301 5-341 14-397 (397)
30 3dm0_A Maltose-binding peripla 100.0 8.2E-35 2.8E-39 340.2 39.0 293 5-339 380-693 (694)
31 3i2n_A WD repeat-containing pr 100.0 7.9E-35 2.7E-39 310.0 35.1 299 6-342 17-356 (357)
32 1gxr_A ESG1, transducin-like e 100.0 3.7E-34 1.3E-38 302.0 39.9 319 6-383 8-328 (337)
33 3k26_A Polycomb protein EED; W 100.0 3.6E-35 1.2E-39 313.5 31.8 299 5-339 16-366 (366)
34 3sfz_A APAF-1, apoptotic pepti 100.0 9.7E-35 3.3E-39 361.5 40.6 353 5-407 613-1099(1249)
35 1got_B GT-beta; complex (GTP-b 100.0 2.7E-34 9.2E-39 305.8 38.0 254 60-344 51-306 (340)
36 3vl1_A 26S proteasome regulato 100.0 4.3E-35 1.5E-39 320.3 32.6 284 9-341 58-367 (420)
37 3zwl_B Eukaryotic translation 100.0 4E-34 1.4E-38 305.5 37.4 295 5-343 30-350 (369)
38 2pm9_A Protein WEB1, protein t 100.0 1.6E-35 5.3E-40 322.9 26.6 311 4-340 64-415 (416)
39 4e54_B DNA damage-binding prot 100.0 8.2E-35 2.8E-39 320.7 31.3 290 6-342 118-433 (435)
40 3ei3_B DNA damage-binding prot 100.0 2E-34 6.9E-39 311.3 33.4 283 5-339 71-382 (383)
41 1k8k_C P40, ARP2/3 complex 41 100.0 1.1E-34 3.8E-39 310.9 30.9 297 6-343 7-365 (372)
42 3frx_A Guanine nucleotide-bind 100.0 9.1E-34 3.1E-38 298.9 34.8 290 61-383 14-308 (319)
43 2pbi_B Guanine nucleotide-bind 100.0 1.5E-33 5E-38 301.9 36.7 257 61-344 61-320 (354)
44 3odt_A Protein DOA1; ubiquitin 100.0 1.3E-33 4.5E-38 294.7 34.5 286 5-344 16-301 (313)
45 3mkq_A Coatomer beta'-subunit; 100.0 7.9E-34 2.7E-38 337.4 37.1 358 5-407 11-406 (814)
46 3dwl_C Actin-related protein 2 100.0 1.4E-34 4.7E-39 311.7 26.7 291 7-337 11-377 (377)
47 2j04_B YDR362CP, TAU91; beta p 100.0 2.1E-34 7.3E-39 323.1 29.0 318 6-341 132-519 (524)
48 2oaj_A Protein SNI1; WD40 repe 100.0 6.7E-34 2.3E-38 340.3 33.9 209 3-253 13-243 (902)
49 4ery_A WD repeat-containing pr 100.0 6E-33 2.1E-37 291.0 36.7 253 60-345 19-274 (312)
50 1r5m_A SIR4-interacting protei 100.0 1.5E-33 5.2E-38 307.1 33.3 282 6-339 107-425 (425)
51 4h5i_A Guanine nucleotide-exch 100.0 1.8E-34 6.1E-39 310.4 25.3 300 9-340 16-344 (365)
52 3fm0_A Protein CIAO1; WDR39,SG 100.0 2E-33 6.7E-38 299.8 32.9 293 61-384 12-337 (345)
53 4gga_A P55CDC, cell division c 100.0 7.2E-33 2.5E-37 303.6 38.2 286 9-344 107-400 (420)
54 2xyi_A Probable histone-bindin 100.0 5.2E-33 1.8E-37 305.8 35.6 318 9-343 47-414 (430)
55 4aez_A CDC20, WD repeat-contai 100.0 3.9E-33 1.3E-37 303.8 34.2 284 10-344 96-385 (401)
56 2hes_X YDR267CP; beta-propelle 100.0 4.5E-33 1.5E-37 295.1 33.8 294 61-381 11-327 (330)
57 3vl1_A 26S proteasome regulato 100.0 2.2E-33 7.4E-38 306.7 31.8 293 8-339 98-419 (420)
58 1pgu_A Actin interacting prote 100.0 1.2E-32 4.2E-37 315.7 39.1 356 6-406 62-597 (615)
59 3sfz_A APAF-1, apoptotic pepti 100.0 5.6E-33 1.9E-37 345.7 39.0 359 6-407 656-1141(1249)
60 2oaj_A Protein SNI1; WD40 repe 100.0 8.4E-34 2.9E-38 339.4 29.1 300 4-341 55-521 (902)
61 2pm7_B Protein transport prote 100.0 1.3E-32 4.4E-37 286.9 34.1 253 61-339 6-285 (297)
62 4ggc_A P55CDC, cell division c 100.0 2.9E-32 9.8E-37 285.4 36.8 283 10-340 28-316 (318)
63 1erj_A Transcriptional repress 100.0 1.2E-32 4E-37 299.3 34.8 285 59-380 59-387 (393)
64 1pgu_A Actin interacting prote 100.0 1.7E-32 5.9E-37 314.5 37.9 345 5-402 16-381 (615)
65 4a11_B DNA excision repair pro 100.0 5.6E-32 1.9E-36 293.2 39.3 298 6-344 42-370 (408)
66 1yfq_A Cell cycle arrest prote 100.0 3.3E-32 1.1E-36 288.3 36.3 281 5-336 9-321 (342)
67 3gre_A Serine/threonine-protei 100.0 5.7E-34 1.9E-38 313.5 23.4 293 6-336 62-437 (437)
68 3dw8_B Serine/threonine-protei 100.0 8.6E-33 2.9E-37 304.4 32.0 306 4-337 25-444 (447)
69 3v7d_B Cell division control p 100.0 1.3E-31 4.4E-36 297.1 38.1 289 6-344 120-426 (464)
70 4e54_B DNA damage-binding prot 100.0 1.4E-32 4.8E-37 302.8 29.9 257 61-344 116-392 (435)
71 2xzm_R RACK1; ribosome, transl 100.0 9.1E-32 3.1E-36 286.5 34.6 253 61-343 18-289 (343)
72 2pm7_B Protein transport prote 100.0 6.5E-32 2.2E-36 281.6 32.5 253 5-295 7-284 (297)
73 4aow_A Guanine nucleotide-bind 100.0 2.2E-31 7.4E-36 281.5 35.0 257 60-344 34-291 (340)
74 2j04_B YDR362CP, TAU91; beta p 100.0 1.9E-32 6.5E-37 307.3 26.2 321 62-406 131-496 (524)
75 1p22_A F-BOX/WD-repeat protein 100.0 1.4E-31 4.8E-36 294.7 32.4 277 8-344 134-419 (435)
76 3bg1_A Protein SEC13 homolog; 100.0 4E-32 1.4E-36 285.9 26.8 254 5-295 11-292 (316)
77 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.1E-31 1.1E-35 292.6 35.1 304 14-384 124-430 (445)
78 3dm0_A Maltose-binding peripla 100.0 2.2E-31 7.6E-36 311.1 35.8 256 61-344 379-637 (694)
79 3bg1_A Protein SEC13 homolog; 100.0 2.2E-32 7.6E-37 287.8 23.8 253 61-338 10-292 (316)
80 3f3f_A Nucleoporin SEH1; struc 100.0 4E-31 1.4E-35 279.0 33.4 312 5-343 9-341 (351)
81 3ei3_B DNA damage-binding prot 100.0 2.6E-31 9E-36 286.9 32.0 254 61-345 70-345 (383)
82 1k8k_C P40, ARP2/3 complex 41 100.0 4.7E-31 1.6E-35 282.6 32.1 248 63-339 7-274 (372)
83 1sq9_A Antiviral protein SKI8; 100.0 3.1E-31 1.1E-35 287.1 29.8 260 61-345 13-328 (397)
84 3mkq_A Coatomer beta'-subunit; 100.0 1E-30 3.4E-35 310.7 36.9 337 6-405 54-438 (814)
85 3mmy_A MRNA export factor; mRN 100.0 7.8E-31 2.7E-35 279.8 32.3 286 5-338 37-345 (368)
86 2j04_A TAU60, YPL007P, hypothe 100.0 1.5E-32 5.1E-37 301.4 17.7 305 7-381 15-350 (588)
87 3dwl_C Actin-related protein 2 100.0 9.3E-32 3.2E-36 289.5 22.2 248 63-339 10-281 (377)
88 3zwl_B Eukaryotic translation 100.0 4.2E-30 1.4E-34 274.3 34.7 288 58-382 26-346 (369)
89 3dw8_B Serine/threonine-protei 100.0 9.2E-31 3.2E-35 288.1 29.4 306 61-383 25-438 (447)
90 3jrp_A Fusion protein of prote 100.0 9.5E-31 3.3E-35 280.6 27.6 255 5-298 9-289 (379)
91 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-30 3.7E-35 284.3 27.8 299 10-343 37-346 (402)
92 3odt_A Protein DOA1; ubiquitin 100.0 9.9E-30 3.4E-34 265.2 33.9 283 61-384 15-298 (313)
93 3gre_A Serine/threonine-protei 100.0 4.2E-31 1.4E-35 290.6 24.1 315 61-404 60-418 (437)
94 2yru_A Steroid receptor RNA ac 100.0 9.8E-33 3.3E-37 236.7 7.5 105 610-718 10-114 (118)
95 3v7d_B Cell division control p 100.0 2E-29 6.8E-34 279.5 35.9 298 61-402 118-442 (464)
96 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.2E-29 1.1E-33 277.1 37.1 247 63-339 101-391 (450)
97 3k26_A Polycomb protein EED; W 100.0 2E-30 6.7E-35 276.7 26.4 255 61-343 15-322 (366)
98 3jrp_A Fusion protein of prote 100.0 3.9E-30 1.3E-34 275.8 28.8 253 61-340 8-288 (379)
99 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.1E-29 7.2E-34 278.0 35.1 274 6-340 158-443 (445)
100 4gga_A P55CDC, cell division c 100.0 1.1E-29 3.9E-34 278.2 32.6 266 6-315 146-414 (420)
101 3i2n_A WD repeat-containing pr 100.0 9.9E-30 3.4E-34 270.5 28.5 253 61-343 15-295 (357)
102 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-29 3.7E-34 276.5 28.3 260 65-342 35-302 (402)
103 1yfq_A Cell cycle arrest prote 100.0 1.4E-29 4.6E-34 268.2 27.2 277 61-383 8-314 (342)
104 4a11_B DNA excision repair pro 100.0 1.9E-29 6.6E-34 273.2 28.9 314 39-386 23-369 (408)
105 4aez_A CDC20, WD repeat-contai 100.0 1.3E-28 4.3E-33 268.1 33.8 281 66-384 95-382 (401)
106 2xyi_A Probable histone-bindin 100.0 8.3E-29 2.8E-33 272.2 31.9 265 4-296 125-410 (430)
107 3bws_A Protein LP49; two-domai 100.0 1.7E-28 5.6E-33 269.2 32.1 286 7-339 122-432 (433)
108 3mmy_A MRNA export factor; mRN 100.0 1.8E-28 6.3E-33 261.4 30.3 281 60-383 35-337 (368)
109 1p22_A F-BOX/WD-repeat protein 100.0 4.6E-28 1.6E-32 266.6 34.3 275 61-384 130-416 (435)
110 3vu4_A KMHSV2; beta-propeller 100.0 5.2E-28 1.8E-32 258.9 33.2 277 6-342 18-339 (355)
111 3jro_A Fusion protein of prote 100.0 3E-29 1E-33 295.4 25.3 255 61-342 6-288 (753)
112 3jro_A Fusion protein of prote 100.0 6.9E-29 2.4E-33 292.3 24.3 255 5-298 7-287 (753)
113 3lrv_A PRE-mRNA-splicing facto 100.0 2.6E-28 8.8E-33 259.7 26.1 234 85-341 49-294 (343)
114 4h5i_A Guanine nucleotide-exch 100.0 5.5E-28 1.9E-32 259.7 28.6 254 8-296 74-343 (365)
115 4ggc_A P55CDC, cell division c 100.0 3.6E-27 1.2E-31 246.6 31.4 249 6-298 66-317 (318)
116 3vu4_A KMHSV2; beta-propeller 100.0 2.3E-27 7.8E-32 253.9 30.4 236 61-341 16-273 (355)
117 1l0q_A Surface layer protein; 100.0 4.2E-27 1.4E-31 254.4 32.7 274 20-344 3-280 (391)
118 2j04_A TAU60, YPL007P, hypothe 100.0 3.8E-28 1.3E-32 266.5 24.5 294 61-407 12-344 (588)
119 3lrv_A PRE-mRNA-splicing facto 100.0 2.6E-27 9E-32 251.9 27.5 277 14-340 43-334 (343)
120 4gq1_A NUP37; propeller, trans 100.0 1E-27 3.5E-32 260.3 22.3 269 12-339 94-389 (393)
121 3bws_A Protein LP49; two-domai 100.0 2.3E-26 7.8E-31 252.2 32.3 326 8-380 61-419 (433)
122 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-26 3.8E-31 256.8 29.6 201 121-337 100-337 (450)
123 4gq1_A NUP37; propeller, trans 100.0 2.5E-27 8.5E-32 257.3 22.0 252 122-392 88-390 (393)
124 3f3f_A Nucleoporin SEH1; struc 99.9 2.8E-26 9.6E-31 241.7 27.2 218 117-344 5-254 (351)
125 1l0q_A Surface layer protein; 99.9 3.5E-25 1.2E-29 239.2 36.2 289 4-342 28-345 (391)
126 2w18_A PALB2, fancn, partner a 99.9 1.6E-24 5.5E-29 223.9 26.9 266 38-337 62-355 (356)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.6E-24 9E-29 235.1 26.6 298 8-344 63-392 (415)
128 1nir_A Nitrite reductase; hemo 99.9 9.8E-24 3.3E-28 238.2 30.3 293 9-345 180-520 (543)
129 1nir_A Nitrite reductase; hemo 99.9 2.3E-23 7.9E-28 235.1 28.5 325 13-380 143-497 (543)
130 2ecf_A Dipeptidyl peptidase IV 99.9 2.3E-23 7.7E-28 245.0 29.5 330 7-382 36-445 (741)
131 2w18_A PALB2, fancn, partner a 99.9 9.9E-24 3.4E-28 218.1 22.3 189 85-294 146-355 (356)
132 2hqs_A Protein TOLB; TOLB, PAL 99.9 9.6E-23 3.3E-27 222.7 25.3 303 65-405 63-409 (415)
133 1xfd_A DIP, dipeptidyl aminope 99.9 3.1E-22 1.1E-26 234.5 27.5 328 8-383 17-431 (723)
134 3u4y_A Uncharacterized protein 99.9 1.8E-21 6.2E-26 205.0 30.2 282 13-342 3-307 (331)
135 1ri6_A Putative isomerase YBHE 99.9 1.4E-21 4.7E-26 206.2 27.0 274 39-342 15-313 (343)
136 3hfq_A Uncharacterized protein 99.9 5.4E-21 1.8E-25 203.1 29.4 292 21-343 4-323 (347)
137 3vgz_A Uncharacterized protein 99.9 2.4E-20 8.3E-25 197.7 32.8 279 7-327 40-333 (353)
138 2ojh_A Uncharacterized protein 99.9 4.6E-21 1.6E-25 197.0 25.9 253 37-329 20-292 (297)
139 1pby_B Quinohemoprotein amine 99.9 3.4E-21 1.2E-25 202.6 24.8 274 20-344 2-315 (337)
140 3u4y_A Uncharacterized protein 99.9 3E-20 1E-24 195.6 29.8 269 85-383 11-294 (331)
141 1k32_A Tricorn protease; prote 99.9 1.7E-20 5.7E-25 229.0 31.7 348 6-407 51-485 (1045)
142 3vgz_A Uncharacterized protein 99.9 2.6E-20 8.7E-25 197.6 29.2 281 64-384 40-336 (353)
143 2ojh_A Uncharacterized protein 99.9 9.8E-21 3.3E-25 194.5 24.8 259 89-383 17-293 (297)
144 2z3z_A Dipeptidyl aminopeptida 99.9 2.3E-20 8E-25 218.0 31.2 289 8-341 82-437 (706)
145 1k32_A Tricorn protease; prote 99.9 3.8E-20 1.3E-24 225.7 33.0 278 6-340 202-503 (1045)
146 2ecf_A Dipeptidyl peptidase IV 99.9 2.2E-20 7.4E-25 219.5 29.5 285 9-342 110-462 (741)
147 1xfd_A DIP, dipeptidyl aminope 99.9 2.5E-20 8.5E-25 218.3 29.8 302 65-407 17-423 (723)
148 1ri6_A Putative isomerase YBHE 99.9 9.1E-20 3.1E-24 192.2 27.4 279 5-319 35-334 (343)
149 2z3z_A Dipeptidyl aminopeptida 99.9 4.4E-20 1.5E-24 215.7 27.2 319 9-382 27-421 (706)
150 3scy_A Hypothetical bacterial 99.9 3.7E-19 1.3E-23 190.0 31.1 299 15-344 9-344 (361)
151 1jmx_B Amine dehydrogenase; ox 99.8 1.6E-19 5.5E-24 190.9 27.0 286 12-344 4-330 (349)
152 2oit_A Nucleoporin 214KDA; NH2 99.8 3.8E-19 1.3E-23 195.1 26.4 218 8-253 37-279 (434)
153 3o4h_A Acylamino-acid-releasin 99.8 1.8E-19 6.2E-24 205.7 22.2 263 64-381 21-301 (582)
154 3o4h_A Acylamino-acid-releasin 99.8 2.8E-19 9.6E-24 204.1 23.1 274 8-339 22-315 (582)
155 3hfq_A Uncharacterized protein 99.8 2.6E-18 8.9E-23 182.3 27.8 262 6-300 38-323 (347)
156 2oit_A Nucleoporin 214KDA; NH2 99.8 2.1E-19 7.3E-24 197.1 18.7 209 123-341 36-280 (434)
157 1z68_A Fibroblast activation p 99.8 4E-19 1.4E-23 208.0 20.7 287 10-339 18-391 (719)
158 3scy_A Hypothetical bacterial 99.8 3.6E-17 1.2E-21 174.5 32.2 281 6-316 48-360 (361)
159 1z68_A Fibroblast activation p 99.8 2.1E-18 7.2E-23 201.9 23.4 303 10-343 62-447 (719)
160 4a5s_A Dipeptidyl peptidase 4 99.8 1.8E-17 6.2E-22 194.6 30.6 329 9-382 18-436 (740)
161 3pe7_A Oligogalacturonate lyas 99.8 5.7E-18 1.9E-22 182.3 23.4 285 12-339 40-382 (388)
162 1pby_B Quinohemoprotein amine 99.8 7.3E-18 2.5E-22 177.0 23.7 233 85-344 2-274 (337)
163 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.7E-17 5.9E-22 177.7 25.0 274 40-342 15-344 (365)
164 4a5s_A Dipeptidyl peptidase 4 99.7 1.4E-16 5E-21 186.9 25.9 249 65-345 17-359 (740)
165 3pe7_A Oligogalacturonate lyas 99.7 1.1E-16 3.8E-21 172.1 21.8 276 68-383 39-372 (388)
166 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.5E-15 5.1E-20 162.5 27.3 254 8-297 40-342 (365)
167 3c5m_A Oligogalacturonate lyas 99.7 2.4E-16 8.1E-21 169.7 20.0 288 10-342 38-387 (396)
168 2dg1_A DRP35, lactonase; beta 99.7 6.7E-15 2.3E-19 154.9 29.8 272 7-328 5-300 (333)
169 2xdw_A Prolyl endopeptidase; a 99.7 4.5E-15 1.5E-19 173.4 30.1 299 8-341 74-416 (710)
170 3azo_A Aminopeptidase; POP fam 99.7 9.4E-15 3.2E-19 169.1 31.5 291 6-344 22-374 (662)
171 3fvz_A Peptidyl-glycine alpha- 99.7 2.8E-14 9.7E-19 150.3 32.2 251 64-340 23-323 (329)
172 1q7f_A NHL, brain tumor CG1071 99.7 1.9E-14 6.3E-19 148.0 29.7 243 63-342 28-283 (286)
173 2oiz_A Aromatic amine dehydrog 99.7 3.2E-15 1.1E-19 159.7 24.6 280 17-344 13-341 (361)
174 1jmx_B Amine dehydrogenase; ox 99.7 2.3E-15 8E-20 158.7 21.4 198 128-344 4-289 (349)
175 3c5m_A Oligogalacturonate lyas 99.6 1.7E-15 5.8E-20 163.0 17.7 280 65-382 36-371 (396)
176 3azo_A Aminopeptidase; POP fam 99.6 1.8E-14 6.3E-19 166.7 26.5 256 61-342 20-328 (662)
177 2gop_A Trilobed protease; beta 99.6 1.4E-14 4.8E-19 153.2 22.8 274 5-338 12-330 (347)
178 2oiz_A Aromatic amine dehydrog 99.6 6.1E-14 2.1E-18 149.8 27.6 280 12-319 54-359 (361)
179 2z2n_A Virginiamycin B lyase; 99.6 1.3E-12 4.4E-17 134.4 35.8 282 7-341 14-297 (299)
180 2bkl_A Prolyl endopeptidase; m 99.6 2E-14 6.7E-19 167.5 23.8 292 15-343 75-401 (695)
181 3fvz_A Peptidyl-glycine alpha- 99.6 7.5E-14 2.6E-18 147.0 25.4 264 6-295 22-321 (329)
182 1qks_A Cytochrome CD1 nitrite 99.6 2.2E-13 7.6E-18 153.4 30.6 296 8-346 197-545 (567)
183 3e5z_A Putative gluconolactona 99.6 2.7E-13 9.4E-18 140.1 27.0 243 64-343 27-290 (296)
184 2dg1_A DRP35, lactonase; beta 99.6 2.3E-13 7.9E-18 143.0 26.8 296 65-406 6-319 (333)
185 1q7f_A NHL, brain tumor CG1071 99.6 3.3E-13 1.1E-17 138.6 27.0 247 6-297 28-281 (286)
186 1rwi_B Serine/threonine-protei 99.6 4.5E-13 1.5E-17 136.1 27.6 243 66-343 25-268 (270)
187 3dsm_A Uncharacterized protein 99.6 2.1E-13 7E-18 143.6 25.3 276 37-344 15-306 (328)
188 1qks_A Cytochrome CD1 nitrite 99.6 6.1E-13 2.1E-17 149.8 29.0 276 37-340 175-478 (567)
189 1yr2_A Prolyl oligopeptidase; 99.6 4.1E-13 1.4E-17 157.5 26.8 294 16-344 115-446 (741)
190 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.6E-12 5.6E-17 135.0 26.1 245 65-340 18-300 (314)
191 2qc5_A Streptogramin B lactona 99.5 3.7E-11 1.3E-15 123.5 34.7 279 7-338 19-299 (300)
192 2bkl_A Prolyl endopeptidase; m 99.5 3.2E-13 1.1E-17 157.2 21.1 251 9-299 122-400 (695)
193 1rwi_B Serine/threonine-protei 99.5 5E-12 1.7E-16 128.3 27.4 240 9-298 25-266 (270)
194 2mad_H Methylamine dehydrogena 99.5 2.9E-11 1E-15 129.3 33.4 282 14-344 27-355 (373)
195 2gop_A Trilobed protease; beta 99.5 1.1E-12 3.7E-17 138.5 21.4 226 65-342 15-294 (347)
196 2xdw_A Prolyl endopeptidase; a 99.5 2.7E-12 9.1E-17 149.9 25.2 253 9-298 126-416 (710)
197 2z2n_A Virginiamycin B lyase; 99.5 8.8E-11 3E-15 120.6 33.8 239 63-338 13-254 (299)
198 3e5z_A Putative gluconolactona 99.5 1.6E-11 5.3E-16 126.8 26.1 236 7-299 27-289 (296)
199 3no2_A Uncharacterized protein 99.5 1.6E-11 5.4E-16 125.7 25.8 213 85-327 6-231 (276)
200 2qc5_A Streptogramin B lactona 99.4 4.2E-10 1.4E-14 115.5 34.5 269 64-380 19-290 (300)
201 3g4e_A Regucalcin; six bladed 99.4 2.2E-11 7.6E-16 126.0 23.8 231 67-328 15-262 (297)
202 3dsm_A Uncharacterized protein 99.4 1.8E-11 6.3E-16 128.6 23.2 236 39-316 64-320 (328)
203 3hrp_A Uncharacterized protein 99.4 9.6E-11 3.3E-15 127.0 27.8 240 65-338 131-409 (409)
204 3sjl_D Methylamine dehydrogena 99.4 3.3E-11 1.1E-15 127.6 22.3 286 12-345 37-369 (386)
205 3no2_A Uncharacterized protein 99.4 1.2E-10 4E-15 119.2 24.4 244 17-307 3-263 (276)
206 2ghs_A AGR_C_1268P; regucalcin 99.4 2.7E-10 9.1E-15 119.6 27.7 229 67-329 51-293 (326)
207 1yr2_A Prolyl oligopeptidase; 99.3 5.7E-11 2E-15 139.3 22.9 254 9-304 164-448 (741)
208 3iuj_A Prolyl endopeptidase; h 99.3 9E-11 3.1E-15 136.4 24.3 253 63-344 127-410 (693)
209 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 2.5E-10 8.6E-15 118.3 24.4 243 7-296 17-299 (314)
210 3c75_H MADH, methylamine dehyd 99.3 8.3E-11 2.8E-15 126.8 21.1 281 17-344 82-407 (426)
211 2mad_H Methylamine dehydrogena 99.3 1.4E-09 5E-14 116.1 29.9 263 12-303 70-357 (373)
212 3sjl_D Methylamine dehydrogena 99.3 5E-10 1.7E-14 118.6 25.2 277 12-318 82-384 (386)
213 1xip_A Nucleoporin NUP159; bet 99.3 1.2E-10 4.2E-15 123.7 18.0 176 8-232 38-228 (388)
214 3iuj_A Prolyl endopeptidase; h 99.2 3.5E-10 1.2E-14 131.4 22.9 251 8-299 129-408 (693)
215 2qe8_A Uncharacterized protein 99.2 3.2E-10 1.1E-14 119.8 19.5 246 65-335 17-317 (343)
216 3hrp_A Uncharacterized protein 99.2 2.2E-09 7.4E-14 116.3 26.4 241 7-294 130-408 (409)
217 3dr2_A Exported gluconolactona 99.2 1.3E-09 4.4E-14 113.1 22.9 235 63-330 43-298 (305)
218 1xip_A Nucleoporin NUP159; bet 99.2 2.3E-10 7.9E-15 121.6 15.9 176 125-325 39-230 (388)
219 3g4e_A Regucalcin; six bladed 99.2 7E-09 2.4E-13 107.1 26.6 235 122-383 11-263 (297)
220 3c75_H MADH, methylamine dehyd 99.2 3.5E-09 1.2E-13 114.1 24.6 264 12-303 122-409 (426)
221 2ece_A 462AA long hypothetical 99.2 3E-08 1E-12 105.7 30.2 226 85-327 97-399 (462)
222 2qe8_A Uncharacterized protein 99.1 1.7E-09 5.9E-14 114.2 19.9 239 124-381 17-310 (343)
223 2ghs_A AGR_C_1268P; regucalcin 99.1 1.6E-08 5.4E-13 105.9 26.9 227 126-383 51-293 (326)
224 1mda_H Methylamine dehydrogena 99.1 3.9E-10 1.3E-14 119.5 14.2 254 40-344 47-351 (368)
225 1yiq_A Quinohemoprotein alcoho 99.1 1.4E-08 4.8E-13 117.4 26.9 268 85-382 122-538 (689)
226 1kb0_A Quinohemoprotein alcoho 99.0 2.5E-08 8.6E-13 115.0 26.3 268 85-382 129-540 (677)
227 3q7m_A Lipoprotein YFGL, BAMB; 99.0 1E-07 3.5E-12 101.6 28.9 228 85-344 104-342 (376)
228 1mda_H Methylamine dehydrogena 99.0 1.5E-08 5.3E-13 107.2 20.0 266 12-317 69-366 (368)
229 1npe_A Nidogen, entactin; glyc 99.0 2.8E-07 9.6E-12 93.2 28.2 224 65-319 36-262 (267)
230 3dr2_A Exported gluconolactona 99.0 1.1E-07 3.7E-12 98.4 24.4 229 8-293 45-303 (305)
231 1yiq_A Quinohemoprotein alcoho 99.0 5.2E-08 1.8E-12 112.6 23.9 197 128-329 239-539 (689)
232 1kb0_A Quinohemoprotein alcoho 98.9 6.2E-08 2.1E-12 111.8 23.8 196 127-327 246-539 (677)
233 3q7m_A Lipoprotein YFGL, BAMB; 98.9 1.3E-07 4.3E-12 100.9 24.2 222 85-336 144-375 (376)
234 1npe_A Nidogen, entactin; glyc 98.9 1.1E-06 3.7E-11 88.9 29.2 239 86-344 3-243 (267)
235 2hz6_A Endoplasmic reticulum t 98.9 7.6E-10 2.6E-14 118.2 4.8 223 85-341 10-238 (369)
236 2fp8_A Strictosidine synthase; 98.9 4.7E-07 1.6E-11 94.4 25.4 243 66-341 20-315 (322)
237 3hxj_A Pyrrolo-quinoline quino 98.8 1.7E-07 5.8E-12 97.5 21.1 226 66-342 61-286 (330)
238 3hxj_A Pyrrolo-quinoline quino 98.8 3.7E-07 1.3E-11 94.9 22.8 219 85-341 108-326 (330)
239 2hz6_A Endoplasmic reticulum t 98.8 2.2E-09 7.6E-14 114.6 4.7 200 187-406 10-216 (369)
240 2ece_A 462AA long hypothetical 98.8 5.1E-07 1.7E-11 96.3 22.4 233 13-284 87-399 (462)
241 2iwa_A Glutamine cyclotransfer 98.8 2.6E-07 9E-12 92.6 18.4 198 125-341 22-239 (266)
242 1fwx_A Nitrous oxide reductase 98.7 1E-07 3.5E-12 105.2 15.4 232 85-343 103-435 (595)
243 1kv9_A Type II quinohemoprotei 98.7 8.9E-07 3.1E-11 101.9 22.8 269 85-383 118-522 (668)
244 1fwx_A Nitrous oxide reductase 98.7 6.3E-07 2.2E-11 98.8 19.8 236 135-383 100-409 (595)
245 3nok_A Glutaminyl cyclase; bet 98.7 1.5E-06 5.1E-11 86.1 20.0 181 125-327 56-254 (268)
246 4a2l_A BT_4663, two-component 98.7 4.8E-05 1.6E-09 89.6 36.4 244 64-343 214-484 (795)
247 3nol_A Glutamine cyclotransfer 98.7 8.7E-07 3E-11 87.8 17.8 191 114-326 32-243 (262)
248 2p4o_A Hypothetical protein; p 98.6 1.3E-05 4.6E-10 82.6 27.4 228 65-327 32-277 (306)
249 2iwa_A Glutamine cyclotransfer 98.6 1.1E-06 3.9E-11 88.0 18.3 197 175-384 22-228 (266)
250 4a2l_A BT_4663, two-component 98.6 7.4E-05 2.5E-09 87.9 36.1 283 8-343 310-618 (795)
251 3v64_C Agrin; beta propeller, 98.6 3.5E-05 1.2E-09 81.1 29.8 232 86-342 46-278 (349)
252 2ad6_A Methanol dehydrogenase 98.6 1.4E-05 4.9E-10 90.0 27.4 271 85-385 116-530 (571)
253 3v64_C Agrin; beta propeller, 98.6 4.3E-05 1.5E-09 80.4 29.2 222 64-315 72-294 (349)
254 3v65_B Low-density lipoprotein 98.6 2.5E-05 8.6E-10 83.5 27.7 234 86-343 89-322 (386)
255 1w6s_A Methanol dehydrogenase 98.6 2.2E-05 7.6E-10 88.5 28.1 268 86-383 123-537 (599)
256 1kv9_A Type II quinohemoprotei 98.5 4.7E-06 1.6E-10 95.9 22.7 196 128-327 234-520 (668)
257 3nol_A Glutamine cyclotransfer 98.5 2.1E-06 7.3E-11 85.0 16.9 195 175-384 44-247 (262)
258 3v65_B Low-density lipoprotein 98.5 3.6E-05 1.2E-09 82.3 28.0 222 64-315 115-337 (386)
259 3mbr_X Glutamine cyclotransfer 98.5 7.6E-06 2.6E-10 80.4 19.8 183 124-327 21-223 (243)
260 1ijq_A LDL receptor, low-densi 98.5 3.9E-05 1.3E-09 79.6 25.9 182 146-341 10-197 (316)
261 1ijq_A LDL receptor, low-densi 98.5 9.4E-05 3.2E-09 76.6 28.8 233 86-342 3-241 (316)
262 3qqz_A Putative uncharacterize 98.5 7.4E-05 2.5E-09 74.3 25.8 205 118-337 21-251 (255)
263 2xe4_A Oligopeptidase B; hydro 98.5 3.1E-05 1.1E-09 90.4 26.9 253 9-299 175-461 (751)
264 1flg_A Protein (quinoprotein e 98.4 6.9E-05 2.4E-09 84.5 28.7 272 85-383 118-550 (582)
265 3p5b_L Low density lipoprotein 98.4 9.3E-05 3.2E-09 79.4 27.7 236 86-344 85-325 (400)
266 1w6s_A Methanol dehydrogenase 98.4 6.2E-05 2.1E-09 84.9 26.9 194 129-327 246-535 (599)
267 3v9f_A Two-component system se 98.4 0.00055 1.9E-08 80.3 36.3 241 64-342 312-571 (781)
268 1flg_A Protein (quinoprotein e 98.4 9E-05 3.1E-09 83.6 28.2 178 146-327 291-548 (582)
269 3mbr_X Glutamine cyclotransfer 98.4 2.7E-05 9.2E-10 76.4 20.5 196 174-384 21-226 (243)
270 3sov_A LRP-6, low-density lipo 98.4 0.00011 3.6E-09 76.3 26.0 236 86-343 6-242 (318)
271 4hw6_A Hypothetical protein, I 98.4 8.4E-05 2.9E-09 80.6 25.9 242 66-338 140-432 (433)
272 3tc9_A Hypothetical hydrolase; 98.4 7.4E-05 2.5E-09 81.0 25.3 243 66-338 138-429 (430)
273 1k3i_A Galactose oxidase precu 98.4 2.4E-05 8.2E-10 90.0 22.5 269 85-381 199-530 (656)
274 2ad6_A Methanol dehydrogenase 98.4 4.3E-05 1.5E-09 86.0 24.0 176 147-326 273-525 (571)
275 3nok_A Glutaminyl cyclase; bet 98.3 1.5E-05 5E-10 79.0 17.5 194 175-383 56-256 (268)
276 2fp8_A Strictosidine synthase; 98.3 0.00012 4E-09 75.9 25.4 254 8-296 19-313 (322)
277 3qqz_A Putative uncharacterize 98.3 7.1E-05 2.4E-09 74.5 22.4 198 173-379 26-241 (255)
278 3sov_A LRP-6, low-density lipo 98.3 0.00016 5.3E-09 75.0 25.8 235 38-305 12-247 (318)
279 2p4o_A Hypothetical protein; p 98.3 0.00014 4.7E-09 74.9 25.0 234 8-287 32-279 (306)
280 3p5b_L Low density lipoprotein 98.3 0.00016 5.6E-09 77.5 26.2 190 138-342 85-280 (400)
281 3m0c_C LDL receptor, low-densi 98.3 0.00014 4.8E-09 84.5 26.9 235 86-343 397-636 (791)
282 3v9f_A Two-component system se 98.3 0.0018 6.1E-08 75.9 36.5 245 65-344 163-441 (781)
283 2xbg_A YCF48-like protein; pho 98.2 0.00094 3.2E-08 69.4 29.7 277 7-337 35-320 (327)
284 1k3i_A Galactose oxidase precu 98.2 2.6E-05 8.8E-10 89.7 19.0 288 11-328 189-530 (656)
285 2xe4_A Oligopeptidase B; hydro 98.2 7.8E-05 2.7E-09 87.0 21.9 199 125-337 175-398 (751)
286 1n7d_A LDL receptor, low-densi 98.2 1.7E-05 5.7E-10 91.6 15.8 185 144-342 384-574 (699)
287 3m0c_C LDL receptor, low-densi 98.2 0.00033 1.1E-08 81.4 25.9 188 143-344 401-594 (791)
288 1n7d_A LDL receptor, low-densi 98.1 3.8E-05 1.3E-09 88.6 17.9 209 124-344 406-619 (699)
289 2xzh_A Clathrin heavy chain 1; 98.1 0.0038 1.3E-07 63.2 29.5 272 37-344 47-337 (365)
290 3s94_A LRP-6, low-density lipo 98.1 0.0093 3.2E-07 67.5 37.0 289 9-342 85-426 (619)
291 3kya_A Putative phosphatase; s 98.1 0.00041 1.4E-08 75.6 24.3 248 67-344 141-480 (496)
292 3s94_A LRP-6, low-density lipo 98.1 0.015 5E-07 65.9 36.8 188 144-342 324-513 (619)
293 1bpo_A Protein (clathrin); cla 98.0 0.0056 1.9E-07 64.3 29.7 272 37-344 46-336 (494)
294 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0027 9.1E-08 72.1 28.2 228 39-302 15-243 (628)
295 3kya_A Putative phosphatase; s 97.9 0.001 3.4E-08 72.6 22.6 245 125-381 140-464 (496)
296 4hw6_A Hypothetical protein, I 97.9 0.00059 2E-08 73.9 20.9 239 125-381 140-422 (433)
297 4a0p_A LRP6, LRP-6, low-densit 97.9 0.0049 1.7E-07 69.9 28.4 232 86-342 8-240 (628)
298 3amr_A 3-phytase; beta-propell 97.8 0.0086 3E-07 61.7 26.0 201 85-304 41-272 (355)
299 1dvk_A PRP18; PRE-mRNA splicin 97.8 4.5E-05 1.5E-09 68.5 7.6 97 614-715 35-164 (173)
300 3tc9_A Hypothetical hydrolase; 97.8 0.00059 2E-08 73.8 18.0 161 175-339 138-301 (430)
301 2xbg_A YCF48-like protein; pho 97.7 0.058 2E-06 55.6 35.1 241 64-341 35-280 (327)
302 3ei3_A DNA damage-binding prot 97.7 0.024 8.3E-07 68.7 31.9 336 14-384 507-915 (1158)
303 2p9w_A MAL S 1 allergenic prot 97.7 0.0046 1.6E-07 63.2 21.0 209 122-340 11-266 (334)
304 2ism_A Putative oxidoreductase 97.6 0.003 1E-07 66.2 20.4 239 124-381 31-334 (352)
305 3sre_A PON1, serum paraoxonase 97.6 0.005 1.7E-07 64.2 20.9 214 65-304 50-308 (355)
306 3a9g_A Putative uncharacterize 97.6 0.0089 3E-07 62.7 23.1 241 124-380 29-330 (354)
307 2xzh_A Clathrin heavy chain 1; 97.6 0.042 1.4E-06 55.7 26.2 232 85-344 37-295 (365)
308 3amr_A 3-phytase; beta-propell 97.6 0.0041 1.4E-07 64.1 19.2 194 136-344 40-269 (355)
309 1bpo_A Protein (clathrin); cla 97.5 0.086 2.9E-06 55.5 27.7 232 85-344 36-294 (494)
310 2vpj_A Kelch-like protein 12; 97.4 0.016 5.5E-07 58.8 21.5 190 135-342 62-281 (301)
311 3das_A Putative oxidoreductase 97.3 0.054 1.9E-06 56.1 24.4 247 122-382 30-328 (347)
312 2p9w_A MAL S 1 allergenic prot 97.3 0.006 2.1E-07 62.3 16.7 160 175-339 14-215 (334)
313 2ism_A Putative oxidoreductase 97.3 0.013 4.4E-07 61.4 20.0 236 66-327 32-333 (352)
314 2xn4_A Kelch-like protein 2; s 97.3 0.017 5.9E-07 58.6 20.5 194 135-344 61-281 (302)
315 3a9g_A Putative uncharacterize 97.3 0.068 2.3E-06 55.8 25.3 239 65-327 29-330 (354)
316 2g8s_A Glucose/sorbosone dehyd 97.3 0.049 1.7E-06 56.9 24.1 242 123-379 17-340 (353)
317 2g8s_A Glucose/sorbosone dehyd 97.2 0.042 1.4E-06 57.4 22.6 250 66-337 19-350 (353)
318 3ii7_A Kelch-like protein 7; p 97.2 0.018 6.2E-07 58.6 19.5 231 85-343 13-276 (306)
319 3ei3_A DNA damage-binding prot 97.2 0.15 5.1E-06 61.8 29.6 252 64-343 326-595 (1158)
320 3ott_A Two-component system se 97.1 0.64 2.2E-05 53.8 34.8 236 66-338 192-447 (758)
321 3das_A Putative oxidoreductase 97.1 0.12 4.2E-06 53.5 24.6 236 65-326 32-325 (347)
322 2vpj_A Kelch-like protein 12; 97.1 0.039 1.3E-06 55.9 20.2 191 85-298 64-280 (301)
323 1xi4_A Clathrin heavy chain; a 97.1 0.066 2.3E-06 64.4 24.0 272 37-344 46-336 (1630)
324 3ott_A Two-component system se 97.0 0.29 1E-05 56.6 29.5 232 64-342 21-263 (758)
325 2xn4_A Kelch-like protein 2; s 97.0 0.056 1.9E-06 54.8 20.6 190 85-299 63-279 (302)
326 3b7f_A Glycosyl hydrolase, BNR 97.0 0.4 1.4E-05 50.5 28.0 189 124-316 177-391 (394)
327 3ii7_A Kelch-like protein 7; p 96.9 0.059 2E-06 54.7 20.0 191 85-298 57-274 (306)
328 1zgk_A Kelch-like ECH-associat 96.8 0.063 2.2E-06 54.6 18.7 193 135-344 70-292 (308)
329 3sre_A PON1, serum paraoxonase 96.7 0.031 1.1E-06 58.2 16.2 158 176-339 52-252 (355)
330 3b7f_A Glycosyl hydrolase, BNR 96.7 0.41 1.4E-05 50.5 25.6 201 125-333 116-366 (394)
331 1zgk_A Kelch-like ECH-associat 96.7 0.098 3.3E-06 53.2 19.8 148 135-298 121-289 (308)
332 1cru_A Protein (soluble quinop 96.6 0.42 1.4E-05 51.6 25.0 111 65-193 27-162 (454)
333 4asc_A Kelch repeat and BTB do 96.6 0.21 7.1E-06 50.9 21.2 194 135-344 45-282 (315)
334 2uvk_A YJHT; unknown function, 96.4 0.044 1.5E-06 57.1 15.2 142 196-344 168-347 (357)
335 2be1_A Serine/threonine-protei 96.4 0.023 8E-07 58.6 12.4 197 85-301 11-236 (339)
336 1xi4_A Clathrin heavy chain; a 96.4 0.28 9.6E-06 59.2 22.6 199 130-344 72-294 (1630)
337 2woz_A Kelch repeat and BTB do 96.2 0.29 9.9E-06 49.9 19.9 192 135-344 56-292 (318)
338 2uvk_A YJHT; unknown function, 96.2 0.16 5.4E-06 52.8 17.9 57 244-303 286-349 (357)
339 3pbp_A Nucleoporin NUP82; beta 96.1 0.37 1.3E-05 50.7 19.4 133 195-333 40-206 (452)
340 1cru_A Protein (soluble quinop 96.0 0.4 1.4E-05 51.7 20.4 166 175-344 28-264 (454)
341 2wg3_C Hedgehog-interacting pr 95.9 2.4 8.1E-05 45.7 27.0 254 124-381 14-355 (463)
342 3s25_A Hypothetical 7-bladed b 95.9 1 3.4E-05 45.7 21.6 178 130-339 110-293 (302)
343 3pbp_A Nucleoporin NUP82; beta 95.8 0.78 2.7E-05 48.3 20.5 147 135-292 31-208 (452)
344 4asc_A Kelch repeat and BTB do 95.7 0.56 1.9E-05 47.6 19.0 216 138-381 7-252 (315)
345 2be1_A Serine/threonine-protei 95.6 0.063 2.1E-06 55.4 11.3 192 187-387 11-236 (339)
346 3s25_A Hypothetical 7-bladed b 95.4 1.2 4.1E-05 45.0 19.8 147 179-344 58-221 (302)
347 1tl2_A L10, protein (tachylect 95.1 0.34 1.2E-05 46.2 13.3 184 136-337 4-206 (236)
348 1tl2_A L10, protein (tachylect 94.9 0.27 9.2E-06 46.9 12.3 112 7-152 40-160 (236)
349 2woz_A Kelch repeat and BTB do 94.5 1.2 4.1E-05 45.1 17.4 175 187-382 58-263 (318)
350 3q6k_A 43.2 kDa salivary prote 94.3 3.6 0.00012 42.8 20.4 173 147-327 124-342 (381)
351 2wg3_C Hedgehog-interacting pr 94.3 6.9 0.00024 42.0 26.0 254 66-338 15-370 (463)
352 1sqj_A OXG-RCBH, oligoxylogluc 94.2 6.9 0.00024 45.3 24.7 69 125-195 122-190 (789)
353 2zwa_A Leucine carboxyl methyl 94.1 1 3.6E-05 51.4 17.4 201 135-343 397-639 (695)
354 3sbq_A Nitrous-oxide reductase 93.8 5.8 0.0002 43.2 20.8 138 266-407 324-482 (638)
355 4hvt_A Ritya.17583.B, post-pro 93.6 4.6 0.00016 46.0 21.2 251 12-298 133-431 (711)
356 1sqj_A OXG-RCBH, oligoxylogluc 93.1 14 0.00047 42.7 24.8 158 64-239 14-190 (789)
357 3qhy_B Beta-lactamase inhibito 93.1 7.5 0.00026 38.6 24.2 224 125-384 25-248 (282)
358 3qhy_B Beta-lactamase inhibito 92.6 8.9 0.0003 38.0 25.3 226 65-342 24-249 (282)
359 3sbq_A Nitrous-oxide reductase 91.1 1.1 3.9E-05 48.5 11.1 121 216-342 321-481 (638)
360 2cn3_A Xyloglucanase, beta-1,4 90.4 29 0.00098 39.6 30.9 159 126-286 134-322 (737)
361 2zwa_A Leucine carboxyl methyl 90.3 5.2 0.00018 45.6 16.7 152 187-341 399-579 (695)
362 2pm7_A Protein WEB1, protein t 90.2 0.12 4E-06 54.6 2.6 27 356-382 8-35 (399)
363 3uc1_A DNA gyrase subunit A; D 87.6 26 0.00088 35.5 24.8 115 85-204 110-227 (327)
364 2cn3_A Xyloglucanase, beta-1,4 87.5 44 0.0015 38.0 27.6 113 65-195 23-153 (737)
365 4gq2_M Nucleoporin NUP120; bet 87.3 32 0.0011 40.6 21.0 38 266-304 237-274 (950)
366 4gq2_M Nucleoporin NUP120; bet 87.0 37 0.0013 40.0 21.4 38 175-213 237-274 (950)
367 3q6k_A 43.2 kDa salivary prote 85.5 37 0.0013 35.2 21.0 215 6-236 85-341 (381)
368 3twe_A Alpha4H; unknown functi 84.4 0.73 2.5E-05 26.1 2.3 20 640-659 8-27 (27)
369 3l6v_A GYRA, DNA gyrase subuni 83.9 42 0.0014 34.6 22.9 67 85-155 114-180 (370)
370 4hvt_A Ritya.17583.B, post-pro 83.5 64 0.0022 36.5 20.5 204 127-341 132-383 (711)
371 3uc1_A DNA gyrase subunit A; D 81.6 48 0.0016 33.5 23.5 196 85-295 54-278 (327)
372 3h0g_A DNA-directed RNA polyme 77.9 0.45 1.5E-05 59.0 0.0 9 372-380 1384-1392(1752)
373 1wp5_A Topoisomerase IV; broke 77.2 64 0.0022 32.5 22.3 118 85-205 107-225 (323)
374 3kci_A Probable E3 ubiquitin-p 76.2 75 0.0026 32.7 28.3 242 125-384 54-347 (389)
375 1zi0_A DNA gyrase subunit A; b 71.0 87 0.003 31.2 23.0 115 85-204 110-225 (307)
376 3no0_A DNA gyrase subunit A; D 69.0 90 0.0031 30.5 20.3 129 6-156 66-197 (276)
377 1pzq_A Erythronolide synthase; 68.7 4.3 0.00015 27.4 3.0 17 642-658 30-46 (60)
378 3p8c_E Probable protein brick1 68.6 8.4 0.00029 29.4 5.0 44 613-662 31-75 (75)
379 1wp5_A Topoisomerase IV; broke 66.5 1.1E+02 0.0038 30.7 25.9 159 85-251 51-224 (323)
380 1suu_A DNA gyrase subunit A; t 64.7 1.2E+02 0.004 30.3 23.7 116 85-205 115-231 (312)
381 1aq5_A Matrilin-1, CMP, cartil 62.9 15 0.00052 25.1 4.9 18 639-656 29-46 (47)
382 2ovc_A Potassium voltage-gated 62.7 2.6 8.8E-05 26.6 1.0 18 639-656 16-33 (33)
383 3bj4_A Potassium voltage-gated 62.1 4.6 0.00016 27.9 2.2 19 639-657 23-41 (49)
384 3zwu_A Alkaline phosphatase PH 58.2 1.2E+02 0.0042 33.2 14.2 58 267-325 478-548 (592)
385 3f7f_A Nucleoporin NUP120; nuc 58.0 31 0.0011 38.8 9.3 70 266-341 223-307 (729)
386 1suu_A DNA gyrase subunit A; t 57.7 1.5E+02 0.0053 29.4 28.2 196 85-295 9-230 (312)
387 3l6v_A GYRA, DNA gyrase subuni 56.9 1.8E+02 0.006 29.8 27.2 152 85-250 8-178 (370)
388 3zwu_A Alkaline phosphatase PH 56.8 57 0.0019 36.0 11.2 65 175-240 477-553 (592)
389 2zuy_A YESX protein; beta-prop 56.0 2.3E+02 0.0079 30.9 19.4 42 172-213 181-250 (620)
390 4fhn_B Nucleoporin NUP120; pro 55.6 2.5E+02 0.0086 33.6 17.7 37 267-304 240-276 (1139)
391 2zux_A YESW protein; beta-prop 52.4 2.6E+02 0.0089 30.4 20.8 129 197-342 293-444 (591)
392 3mvd_K Regulator of chromosome 50.5 2.3E+02 0.0079 29.2 33.0 244 124-384 75-376 (423)
393 3ci9_A Heat shock factor-bindi 47.3 4.2 0.00014 28.2 0.1 34 613-655 13-46 (48)
394 4fhn_B Nucleoporin NUP120; pro 46.9 98 0.0034 37.2 12.2 38 175-213 239-276 (1139)
395 1gs9_A Apolipoprotein E, APOE4 46.2 52 0.0018 29.5 7.2 76 608-692 83-160 (165)
396 1vf6_C Maguk P55 subfamily mem 43.8 17 0.00057 26.7 2.8 26 668-693 38-63 (72)
397 2pnv_A Small conductance calci 43.7 30 0.001 23.3 3.8 15 643-657 19-33 (43)
398 1zvu_A Topoisomerase IV subuni 42.6 4E+02 0.014 29.8 14.9 81 63-155 552-633 (716)
399 1zvt_A Topoisomerase IV subuni 41.7 2.4E+02 0.0083 27.0 17.2 81 63-155 82-163 (256)
400 3no0_A DNA gyrase subunit A; D 39.7 2.7E+02 0.0093 27.0 22.8 192 85-295 36-245 (276)
401 1zi0_A DNA gyrase subunit A; b 39.5 2.9E+02 0.0099 27.2 27.9 239 85-340 4-278 (307)
402 1mai_A Phospholipase C delta-1 36.0 16 0.00054 31.5 2.0 18 694-711 104-121 (131)
403 3mvd_K Regulator of chromosome 35.6 3.8E+02 0.013 27.5 35.5 241 86-346 86-381 (423)
404 2zux_A YESW protein; beta-prop 35.3 4.7E+02 0.016 28.4 20.5 42 172-213 177-246 (591)
405 3kci_A Probable E3 ubiquitin-p 35.2 3.7E+02 0.013 27.3 31.0 248 86-347 64-353 (389)
406 3a0f_A Xyloglucanase; beta-pro 35.2 5.3E+02 0.018 29.1 29.3 163 62-240 18-203 (763)
407 2yy0_A C-MYC-binding protein; 33.1 74 0.0025 22.5 4.8 31 615-658 21-51 (53)
408 4g3b_A Alpha4F3D; alpha helix, 32.9 35 0.0012 19.1 2.3 18 640-657 8-25 (26)
409 2oeq_A Protein of unknown func 32.9 1.6E+02 0.0055 24.6 8.0 60 615-681 25-85 (122)
410 1lwu_A Fibrinogen alpha-1 chai 32.8 10 0.00035 31.2 0.3 55 614-674 2-61 (119)
411 1fmh_B General control protein 31.9 20 0.00067 21.3 1.3 24 666-689 3-26 (33)
412 2odv_A Plectin 1, HD1; plakin 31.8 59 0.002 31.1 5.5 26 666-691 181-206 (235)
413 3kyj_A CHEA3, putative histidi 31.1 52 0.0018 28.8 4.6 36 641-676 65-102 (144)
414 3pp5_A BRK1, protein brick1; t 31.0 72 0.0025 24.1 4.6 41 612-658 30-70 (73)
415 1a12_A RCC1, regulator of chro 28.1 5E+02 0.017 26.5 30.7 234 124-383 59-366 (413)
416 4a9v_A PHOX; hydrolase, beta-p 27.9 2E+02 0.0068 31.4 9.4 65 175-240 477-553 (592)
417 2knj_A Microplusin preprotein; 27.7 48 0.0017 26.2 3.3 54 617-675 12-79 (90)
418 3d9j_A RNA-binding protein 16; 27.4 92 0.0032 27.1 5.6 34 642-675 103-137 (145)
419 2rjz_A PILO protein; structura 26.4 37 0.0013 29.8 2.8 55 618-675 3-57 (147)
420 2dyo_B Autophagy protein 16; u 26.4 15 0.0005 25.4 0.1 13 643-655 36-48 (57)
421 4ftd_A Uncharacterized protein 26.0 5.8E+02 0.02 26.6 15.9 214 68-298 139-379 (453)
422 1q1s_A Large T antigen; import 25.9 16 0.00056 21.2 0.3 13 632-644 13-25 (26)
423 4a9v_A PHOX; hydrolase, beta-p 25.6 2.3E+02 0.008 30.9 9.4 64 266-330 477-553 (592)
424 2zuy_A YESX protein; beta-prop 25.0 7E+02 0.024 27.2 28.3 158 175-341 331-502 (620)
425 2lp4_A Chemotaxis protein CHEA 24.2 88 0.003 29.5 5.3 37 640-676 60-98 (225)
426 4gof_A Small glutamine-rich te 23.8 95 0.0032 21.8 3.9 29 649-677 10-38 (52)
427 2c0g_A ERP29 homolog, windbeut 23.4 55 0.0019 31.6 3.6 40 617-661 199-238 (248)
428 3us6_A Histidine-containing ph 23.1 2.3E+02 0.0079 24.7 7.5 46 642-687 50-115 (153)
429 2d4u_A Methyl-accepting chemot 22.7 1.3E+02 0.0045 26.3 6.1 23 667-689 114-136 (176)
430 2v9d_A YAGE; dihydrodipicolini 22.3 51 0.0017 33.6 3.3 45 667-712 246-293 (343)
431 1upk_A MO25 protein; transfera 21.8 1.2E+02 0.0042 30.4 5.9 74 612-689 13-87 (341)
432 2lch_A Protein OR38; structura 21.8 1.3E+02 0.0045 24.6 5.3 36 641-676 60-97 (113)
433 2jqq_A Conserved oligomeric go 20.6 1.2E+02 0.0041 27.5 4.8 72 602-676 40-115 (204)
434 3qfe_A Putative dihydrodipicol 20.5 44 0.0015 33.6 2.4 43 667-710 227-269 (318)
435 3mit_A Lectin; all beta sheet 20.3 3.2E+02 0.011 23.4 7.7 84 201-288 18-110 (141)
436 3e96_A Dihydrodipicolinate syn 20.0 47 0.0016 33.4 2.4 46 667-712 221-270 (316)
No 1
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-43 Score=380.96 Aligned_cols=364 Identities=31% Similarity=0.655 Sum_probs=299.8
Q ss_pred CccccccCccceEEEcCCCC-eEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCC
Q 046451 1 MACIKGINRSASVAFAPDAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGS 79 (719)
Q Consensus 1 m~~l~~~~~V~~vafSpdg~-~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~ 79 (719)
|+++++..+|.+++|||||+ +||+|+.+|.+.+.++.++.|+|||+....... ......|...|++++|++++
T Consensus 6 ~~~l~~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~---~~~~~~~~~~v~~~~~s~~~--- 79 (416)
T 2pm9_A 6 MVKLAEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEK---PIASLQVDSKFNDLDWSHNN--- 79 (416)
T ss_dssp ----CEEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCS---CSCCCCCSSCEEEEEECSSS---
T ss_pred hhhHhhhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCc---EEEEEecCCceEEEEECCCC---
Confidence 78899999999999999997 999999999888888889999999998664322 22335688999999999998
Q ss_pred CCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCC--
Q 046451 80 EDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPA-- 157 (719)
Q Consensus 80 ~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~-- 157 (719)
.+|++|+.||.|++||+.... .+...+..+..|.+.|.+++|+++++++|++++.||.|++||+.+.+
T Consensus 80 -----~~l~~~~~dg~v~vw~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 149 (416)
T 2pm9_A 80 -----KIIAGALDNGSLELYSTNEAN-----NAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTES 149 (416)
T ss_dssp -----SCEEEEESSSCEEEECCSSTT-----SCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSC
T ss_pred -----CeEEEEccCCeEEEeeccccc-----ccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccc
Confidence 799999999999999995311 11247788889999999999999548999999999999999999876
Q ss_pred ----CCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCC-----CCceeEEEECCC
Q 046451 158 ----EPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESI-----KRRCSVLQWNPD 228 (719)
Q Consensus 158 ----~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~-----~~~i~~l~~sp~ 228 (719)
....+ .....|...|.+++|++++..+|++++.||.|++||+++++.+..+.... ...|.+++|+++
T Consensus 150 ~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 225 (416)
T 2pm9_A 150 PSNYTPLTP----GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPK 225 (416)
T ss_dssp TTTCCCBCC----CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSS
T ss_pred ccccccccc----ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCC
Confidence 22221 12345788999999999966899999999999999999999888887322 788999999999
Q ss_pred CCcEEEEEeCCCCCCcEEEEecCCCCCceEEee-CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC
Q 046451 229 VATQLVVASDEDSSPALRLWDMRNTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT 307 (719)
Q Consensus 229 g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~-~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~ 307 (719)
+..++++++.++..+.|++||+++...++..+. +|...|.+++|++.++.+|++++.||.|++||+++++.+..+..|.
T Consensus 226 ~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~ 305 (416)
T 2pm9_A 226 NSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARG 305 (416)
T ss_dssp CTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSS
T ss_pred CCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCC
Confidence 878899999886555799999998767778888 8999999999998778999999999999999999999999999999
Q ss_pred CCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCC-----------CC------------CCCCccCcceecCC
Q 046451 308 NWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDS-----------NF------------SAAPLRAPKWYKRP 364 (719)
Q Consensus 308 ~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~-----------~~------------~~~~~~~p~w~~~~ 364 (719)
..|++++|+++++.+|++++.|+.|+|||+.+.......+. .+ .......++|...+
T Consensus 306 ~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (416)
T 2pm9_A 306 NWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEP 385 (416)
T ss_dssp SCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCC
T ss_pred CceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCC
Confidence 99999999999877999999999999999998775442211 00 00011456777777
Q ss_pred C-ceeeeeCCcEEEEccCCCC
Q 046451 365 A-GASFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 365 ~-~~s~s~~Gklv~~~~~~~~ 384 (719)
. +++|++||+++++...++.
T Consensus 386 ~~~~~~s~dg~~la~~~~d~~ 406 (416)
T 2pm9_A 386 SPAAHWAFGGKLVQITPDGKG 406 (416)
T ss_dssp SCCCEEETTTEEECBCTTSSC
T ss_pred ccceEEeeCCeEEEEeCCCCe
Confidence 6 8999999999999886654
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.3e-42 Score=365.83 Aligned_cols=304 Identities=16% Similarity=0.237 Sum_probs=245.0
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
...|.+++|||||++|++++ |+.+++| ++.+.+|+.......... ......+...|++++|++++ .
T Consensus 30 ~~~v~~~~fs~dG~~l~~~s-d~~~r~W---d~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~d~---------~ 95 (344)
T 4gqb_B 30 ERQLEAARYRSDGALLLGAS-SLSGRCW---AGSLWLFKDPCAAPNEGF-CSAGVQTEAGVADLTWVGER---------G 95 (344)
T ss_dssp CSEEEEEEECTTSCEEEEEE-CCSSSCC---CEEEEEESSGGGTTCGGG-CSEEEEESSCEEEEEEETTT---------E
T ss_pred cCCEEEEEECCCCCEEEEEe-CCceEEe---eceeeeeccccccCCcce-eeeeeccCCCEEEEEEeCCC---------e
Confidence 45689999999999999887 7788776 344455543322222211 12234567789999999984 7
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCC-CceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGN-PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~-~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
|++|+.||.|+|||+. ++... .....+.+|.+.|++|+|++ ++++|++|+.|++|+|||+.+++.+..+
T Consensus 96 l~~~s~dg~v~lWd~~------~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~~~~--- 165 (344)
T 4gqb_B 96 ILVASDSGAVELWELD------ENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVVLSSY--- 165 (344)
T ss_dssp EEEEETTSEEEEEEEC------TTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEE---
T ss_pred EEEEECCCEEEEEecc------CCCceeEeeccccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEE---
Confidence 8899999999999994 33110 11234558999999999999 8999999999999999999988765442
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-CCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-SIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
.+|.+.|++++|++++..+|++++.|++|++||+++++.+..+.. .+...+.+++|++++..+|++++.|+ +
T Consensus 166 ----~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg---~ 238 (344)
T 4gqb_B 166 ----RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG---T 238 (344)
T ss_dssp ----CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS---E
T ss_pred ----cCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC---c
Confidence 458889999999999878999999999999999999998887753 45567899999998878999999998 9
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEE
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~la 324 (719)
|+|||+++. +++.++.+|...|++++|+|++.++|++|+.|++|+|||+.+++++ .+.+|.+.|++++|+|++..+|+
T Consensus 239 v~~wd~~~~-~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~lla 316 (344)
T 4gqb_B 239 VSLVDTKST-SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLT 316 (344)
T ss_dssp EEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEE
T ss_pred EEEEECCCC-cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEE
Confidence 999999875 6788999999999999999944478999999999999999988765 57899999999999999978999
Q ss_pred EEeCCCcEEEEeCCCCccc
Q 046451 325 ASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 325 s~s~Dg~I~iwd~~~~~~~ 343 (719)
+++.|++|++|++.+..+.
T Consensus 317 s~s~D~~v~~w~v~~~~~~ 335 (344)
T 4gqb_B 317 TVGWDHQVVHHVVPTEPLP 335 (344)
T ss_dssp EEETTSCEEEEECCC----
T ss_pred EEcCCCeEEEEECCCCCCC
Confidence 9999999999999886553
No 3
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-40 Score=357.21 Aligned_cols=304 Identities=16% Similarity=0.261 Sum_probs=245.5
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
|...|++|+|||||++||+|+.|. +++| ++.+++|+...+.....+ ......|...|++++|++++
T Consensus 41 H~~~V~~v~fSpDG~~las~s~d~-~~~w---d~~v~~~~~~~~~~~~~~-~~~~~~~~~~V~~~~~s~d~--------- 106 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLAASSLS-SRTW---GGSIWVFKDPEGAPNESL-CTAGVQTEAGVTDVAWVSEK--------- 106 (357)
T ss_dssp CCSEEEEEEECSSSCEEEEEECSS-SSSC---CEEEEEESSCC---CGGG-CSEEEECSSCEEEEEEETTT---------
T ss_pred ccCCEEEEEECCCCCEEEEEcCCC-Cccc---cCeEEEEECCCCCcceeE-ecccCCCCCCEEEEEEcCCC---------
Confidence 567899999999999999999875 3444 577889988765544433 23345688899999999985
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
.+++++.||.|+|||+.+... .........+|.+.|++++|++ ++++|++|+.|+.|+|||+.+++....+
T Consensus 107 ~~l~~s~dg~v~lWd~~~~~~-----~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~--- 177 (357)
T 4g56_B 107 GILVASDSGAVELWEILEKES-----LLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSY--- 177 (357)
T ss_dssp EEEEEETTSCEEEC-------------CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEEEEE---
T ss_pred CEEEEECCCEEEEeeccccce-----eEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEE---
Confidence 566778899999999843211 0012234557999999999999 8899999999999999999987655442
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-CCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-SIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
..|...|++++|++++..+|++++.||+|++||+++++.+..+.. .+...+.+++|+|++..+|++++.|+ .
T Consensus 178 ----~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~---~ 250 (357)
T 4g56_B 178 ----NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG---N 250 (357)
T ss_dssp ----CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS---C
T ss_pred ----cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc---c
Confidence 357889999999999877899999999999999999887765542 46778999999999888999999998 8
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEE
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~la 324 (719)
|++||+++. +.+..+.+|...|++++|+++++++|++|+.|++|+|||+++++++..+ +|.+.|++|+|+|.+..+|+
T Consensus 251 i~~wd~~~~-~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~ 328 (357)
T 4g56_B 251 VSLVNIKNP-DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFT 328 (357)
T ss_dssp EEEEESSCG-GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEE
T ss_pred eeEEECCCC-cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEE
Confidence 999999875 6788899999999999999955578999999999999999999887765 89999999999984338999
Q ss_pred EEeCCCcEEEEeCCCCc
Q 046451 325 ASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 325 s~s~Dg~I~iwd~~~~~ 341 (719)
+++.||+|++|++....
T Consensus 329 s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 329 TVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EEETTSCEEEEECC---
T ss_pred EEcCCCeEEEEECCCCC
Confidence 99999999999997643
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.8e-40 Score=363.09 Aligned_cols=286 Identities=17% Similarity=0.338 Sum_probs=255.7
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.|.+.|++++|+|++++||+|+.||.| +|||+..+.....+ .+|...|++++|++++
T Consensus 106 gh~~~V~~~~~~p~~~~l~s~s~Dg~i----------~vwd~~~~~~~~~l-----~~h~~~V~~v~~~~~~-------- 162 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSASEDATI----------KVWDYETGDFERTL-----KGHTDSVQDISFDHSG-------- 162 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEESSSCE----------EEEETTTCCCCEEE-----CCCSSCEEEEEECTTS--------
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeE----------EEEECCCCcEEEEE-----eccCCcEEEEEEcCCC--------
Confidence 366789999999999999999988877 88998876544332 4689999999999998
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
.+|++|+.||.|+|||+ .+. ..+..+.+|...|.+++|++ ++++|++|+.|++|++||+.++.....+
T Consensus 163 ~~l~sgs~D~~i~iwd~------~~~---~~~~~~~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~~~~~-- 230 (410)
T 1vyh_C 163 KLLASCSADMTIKLWDF------QGF---ECIRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTF-- 230 (410)
T ss_dssp SEEEEEETTSCCCEEET------TSS---CEEECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEE--
T ss_pred CEEEEEeCCCeEEEEeC------CCC---ceeEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEE--
Confidence 79999999999999999 445 77888999999999999999 7899999999999999999988765442
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCC---------------
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDV--------------- 229 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g--------------- 229 (719)
.+|...|.++.|++++ .+|++++.|++|++||+++++....+. .|...|.+++|++++
T Consensus 231 -----~~h~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 303 (410)
T 1vyh_C 231 -----TGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAELR-EHRHVVECISWAPESSYSSISEATGSETKK 303 (410)
T ss_dssp -----ECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECCSCGGGGGGGCCSCC---
T ss_pred -----eCCCccEEEEEECCCC-CEEEEEcCCCeEEEEECCCCceeeEec-CCCceEEEEEEcCcccccchhhhccccccc
Confidence 3477899999999997 699999999999999999999988887 799999999999973
Q ss_pred ----CcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC
Q 046451 230 ----ATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA 305 (719)
Q Consensus 230 ----~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~ 305 (719)
..+|++++.|+ +|++||++++ .++..+.+|...|.+++|++ ++.+|++|+.||.|+|||+.+++++..+.+
T Consensus 304 ~~~~g~~l~sgs~D~---~i~iwd~~~~-~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~ 378 (410)
T 1vyh_C 304 SGKPGPFLLSGSRDK---TIKMWDVSTG-MCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNA 378 (410)
T ss_dssp ----CCEEEEEETTS---EEEEEETTTT-EEEEEEECCSSCEEEEEECS-SSSCEEEEETTTEEEEECCTTSCCCEEEEC
T ss_pred cCCCCCEEEEEeCCC---eEEEEECCCC-ceEEEEECCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCceEEEEcC
Confidence 24799999998 9999999875 67888999999999999999 999999999999999999999999999999
Q ss_pred CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 306 GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 306 h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
|...|++++|++++ .+|++|+.||+|+||+++
T Consensus 379 h~~~v~~l~~~~~~-~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 379 HEHFVTSLDFHKTA-PYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CSSCEEEEEECSSS-SCEEEEETTSEEEEEC--
T ss_pred CCCcEEEEEEcCCC-CEEEEEeCCCcEEEEeCC
Confidence 99999999999999 799999999999999963
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.3e-40 Score=345.18 Aligned_cols=287 Identities=17% Similarity=0.290 Sum_probs=251.5
Q ss_pred cccCccceEEEcCC----CCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCC
Q 046451 5 KGINRSASVAFAPD----APYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSE 80 (719)
Q Consensus 5 ~~~~~V~~vafSpd----g~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~ 80 (719)
.|.+.|++++|+++ +++||+|+.||.| +||++........ ....+|...|.+++|++++
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v----------~vW~~~~~~~~~~---~~l~gh~~~v~~~~~~~~~---- 92 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSLDDLV----------KVWKWRDERLDLQ---WSLEGHQLGVVSVDISHTL---- 92 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEETTSCE----------EEEEEETTEEEEE---EEECCCSSCEEEEEECSSS----
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcCCCCE----------EEEECCCCCeeee---eeeccCCCCEEEEEECCCC----
Confidence 47789999999985 5799999988877 7888874432111 2235789999999999998
Q ss_pred CCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCC
Q 046451 81 DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 81 ~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~ 160 (719)
.++++++.|+.|+|||+ .++ +.+..+..|...+.+++|++ ++++|++++.||.|++||+.+++...
T Consensus 93 ----~~l~s~s~D~~i~lWd~------~~~---~~~~~~~~~~~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~~~ 158 (321)
T 3ow8_A 93 ----PIAASSSLDAHIRLWDL------ENG---KQIKSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEY 158 (321)
T ss_dssp ----SEEEEEETTSEEEEEET------TTT---EEEEEEECCTTCCCCEEECT-TSSEEEEECTTSEEEEEETTTCSEEE
T ss_pred ----CEEEEEeCCCcEEEEEC------CCC---CEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCcEEEEEcCCCceeE
Confidence 79999999999999999 555 77888888999999999999 88999999999999999999876543
Q ss_pred ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCC
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED 240 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~ 240 (719)
.+ ..+...|.+++|++++ .+|++++.||.|++||+++++.+..+. .|...|.+++|++++ .+|++++.|+
T Consensus 159 ~~-------~~~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~spd~-~~l~s~s~dg 228 (321)
T 3ow8_A 159 SL-------DTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDS-QLLVTASDDG 228 (321)
T ss_dssp EE-------ECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCCCEEEECTTS-CEEEEECTTS
T ss_pred Ee-------cCCCceEEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEEEEEc-ccCCceeEEEEcCCC-CEEEEEcCCC
Confidence 32 2356689999999997 699999999999999999999998888 789999999999998 5899999998
Q ss_pred CCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCC
Q 046451 241 SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIP 320 (719)
Q Consensus 241 ~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~ 320 (719)
.|++||+++. ..+..+.+|...|.+++|+| ++.+|++++.|++|+|||+.+++++.++.+|...|++++|++++
T Consensus 229 ---~i~iwd~~~~-~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g- 302 (321)
T 3ow8_A 229 ---YIKIYDVQHA-NLAGTLSGHASWVLNVAFCP-DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNG- 302 (321)
T ss_dssp ---CEEEEETTTC-CEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-
T ss_pred ---eEEEEECCCc-ceeEEEcCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCC-
Confidence 8999999875 66788999999999999999 89999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCcEEEEeCC
Q 046451 321 GVISASSFDGKIGIYNIE 338 (719)
Q Consensus 321 ~~las~s~Dg~I~iwd~~ 338 (719)
.+|++++.||+|+|||+.
T Consensus 303 ~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 303 SKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SEEEEEETTCCEEEEECC
T ss_pred CEEEEEeCCCeEEEEeCC
Confidence 799999999999999963
No 6
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.9e-39 Score=370.99 Aligned_cols=376 Identities=14% Similarity=0.201 Sum_probs=279.4
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCC--ceE---------EEEEeeccCCcccce-----------------
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSS--ANL---------EIFKLDFQSEDRDLL----------------- 56 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~--~~i---------~iwd~~~~~~~~~~~----------------- 56 (719)
.|.+.|++++|||||++||+|+.||.|+||.... ..+ .|+++........+.
T Consensus 57 ~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~ 136 (611)
T 1nr0_A 57 EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT 136 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT
T ss_pred CCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC
Confidence 4668899999999999999999999998775321 100 011221111111000
Q ss_pred ---eecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeC
Q 046451 57 ---LVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNS 133 (719)
Q Consensus 57 ---~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp 133 (719)
.....+|...|++++|++++. .+|++|+.|++|++||. ..+ +....+.+|.+.|.+++|++
T Consensus 137 ~~~~~~l~gh~~~v~~v~f~p~~~-------~~l~s~s~D~~v~lwd~------~~~---~~~~~l~~H~~~V~~v~fsp 200 (611)
T 1nr0_A 137 GTSNGNLTGQARAMNSVDFKPSRP-------FRIISGSDDNTVAIFEG------PPF---KFKSTFGEHTKFVHSVRYNP 200 (611)
T ss_dssp CCBCBCCCCCSSCEEEEEECSSSS-------CEEEEEETTSCEEEEET------TTB---EEEEEECCCSSCEEEEEECT
T ss_pred CCCcceecCCCCCceEEEECCCCC-------eEEEEEeCCCeEEEEEC------CCC---eEeeeeccccCceEEEEECC
Confidence 011246788899999999863 46999999999999998 444 67788999999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec
Q 046451 134 FTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS 213 (719)
Q Consensus 134 ~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~ 213 (719)
++++|++++.|++|+|||+.+++....+........+|.+.|.+++|++++ .+|++++.|++|++||+++++.+.++.
T Consensus 201 -dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~~v~lWd~~~~~~~~~~~ 278 (611)
T 1nr0_A 201 -DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNVATLKVEKTIP 278 (611)
T ss_dssp -TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred -CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCC-CEEEEEeCCCeEEEEeCCCCceeeeec
Confidence 889999999999999999988776544311111122688899999999997 599999999999999999876654332
Q ss_pred ------------------------------------------CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecC
Q 046451 214 ------------------------------------------ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR 251 (719)
Q Consensus 214 ------------------------------------------~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~ 251 (719)
.+|...|.+++|+++| .+|++++.|+ +|++||++
T Consensus 279 ~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg-~~l~s~s~D~---~v~~Wd~~ 354 (611)
T 1nr0_A 279 VGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADG-KTLFSADAEG---HINSWDIS 354 (611)
T ss_dssp CCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTS---CEEEEETT
T ss_pred CCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC-CEEEEEeCCC---cEEEEECC
Confidence 1578899999999998 5789999998 89999987
Q ss_pred CCCCceEEe-e---------------------------------------------------------------------
Q 046451 252 NTMSPVKEF-V--------------------------------------------------------------------- 261 (719)
Q Consensus 252 ~~~~~~~~~-~--------------------------------------------------------------------- 261 (719)
+.. ....+ .
T Consensus 355 ~~~-~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~ 433 (611)
T 1nr0_A 355 TGI-SNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKH 433 (611)
T ss_dssp TCC-EEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSE
T ss_pred CCc-eeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCce
Confidence 532 11000 0
Q ss_pred ------------CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE--EEEecCCCCCeEEeEEcCCCCCEEEEEe
Q 046451 262 ------------GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI--VSELPAGTNWNFDIHWYPKIPGVISASS 327 (719)
Q Consensus 262 ------------~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~--~~~l~~h~~~v~~l~~spdg~~~las~s 327 (719)
.|...+.+++|+| |+++|++|+.|++|+|||+.+++. +.. .+|...|++++|+||| .+|++++
T Consensus 434 v~~~~~~~~~~~~~~~~v~~va~sp-dg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg-~~las~s 510 (611)
T 1nr0_A 434 IAIYSHGKLTEVPISYNSSCVALSN-DKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNG-AFLVATD 510 (611)
T ss_dssp EEEEETTEEEEEECSSCEEEEEECT-TSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTS-SEEEEEE
T ss_pred EEEEeCCceeeeecCCCceEEEEeC-CCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCC-CEEEEEc
Confidence 1234577899999 999999999999999999987654 333 6799999999999999 7999999
Q ss_pred CCCcEEEEeCCC-CcccccCCCCCCCCCccCcceecCCC-ceeeeeCCcEEEEccCCCC-Cc-cccccc-cccceeeccC
Q 046451 328 FDGKIGIYNIEG-CSRYGVGDSNFSAAPLRAPKWYKRPA-GASFGFGGKLVSFHPKSSA-GH-TSENSQ-HAPVHGVDQS 402 (719)
Q Consensus 328 ~Dg~I~iwd~~~-~~~~~~~~~~~~~~~~~~p~w~~~~~-~~s~s~~Gklv~~~~~~~~-~~-~~~~~~-~~~v~~v~~s 402 (719)
.|++|++|++.+ ++.............+....|.+... .++.+.||.+..|+.+... .. ..+.+| .+.|.+|+++
T Consensus 511 ~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs 590 (611)
T 1nr0_A 511 QSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL 590 (611)
T ss_dssp TTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEE
T ss_pred CCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEc
Confidence 999999999987 55433211111223345556665543 4566677778888776554 22 467899 8999999999
Q ss_pred CCCC
Q 046451 403 KYGM 406 (719)
Q Consensus 403 ~~~~ 406 (719)
+|+.
T Consensus 591 ~d~~ 594 (611)
T 1nr0_A 591 NETT 594 (611)
T ss_dssp ETTE
T ss_pred CCCE
Confidence 9875
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.6e-39 Score=338.87 Aligned_cols=291 Identities=18% Similarity=0.304 Sum_probs=248.5
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.|.+.|.+++|+|||++||+|+.||.| +|||+..+.... ....|...|.+++|++++
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v----------~lWd~~~~~~~~-----~~~~~~~~v~~~~~~~~~-------- 67 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRV----------ELWNYETQVEVR-----SIQVTETPVRAGKFIARK-------- 67 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEE----------EEEETTTTEEEE-----EEECCSSCEEEEEEEGGG--------
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcE----------EEEECCCCceeE-----EeeccCCcEEEEEEeCCC--------
Confidence 366889999999999999999988877 889887544322 224578899999999998
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
++|++|+.|+.|++||+ .++ +.+..+.+|.+.|.+++|++ ++++|++|+.|++|++||+++.....
T Consensus 68 ~~l~s~s~d~~i~vwd~------~~~---~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~---- 133 (304)
T 2ynn_A 68 NWIIVGSDDFRIRVFNY------NTG---EKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALE---- 133 (304)
T ss_dssp TEEEEEETTSEEEEEET------TTC---CEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEE----
T ss_pred CEEEEECCCCEEEEEEC------CCC---cEEEEEeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchh----
Confidence 79999999999999999 556 78889999999999999999 78999999999999999998764321
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCC-CcEEEEEeCCCCCC
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDV-ATQLVVASDEDSSP 243 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g-~~~l~~~s~d~~~~ 243 (719)
....+|...|.+++|++++..+|++|+.|++|++||+++.+....+...+...+..++|++.. ..+|++++.|+
T Consensus 134 --~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~--- 208 (304)
T 2ynn_A 134 --QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL--- 208 (304)
T ss_dssp --EEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTS---
T ss_pred --hhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCC---
Confidence 123457889999999996567999999999999999998887777765677889999998742 35899999998
Q ss_pred cEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCC-E
Q 046451 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPG-V 322 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~-~ 322 (719)
+|++||+++. +++.++.+|...|.+++|+| ++.+|++|+.||+|+|||+.+++.+..+..|...+++++|++++.. +
T Consensus 209 ~i~iWd~~~~-~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (304)
T 2ynn_A 209 TIKIWDYQTK-SCVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNY 286 (304)
T ss_dssp EEEEEETTTT-EEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGC
T ss_pred eEEEEeCCCC-ccceeeCCCCCCEEEEEECC-CCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceE
Confidence 9999999875 67889999999999999999 8899999999999999999999999999999999999999998854 4
Q ss_pred EEEEeCCCcEEEEeCCCC
Q 046451 323 ISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 323 las~s~Dg~I~iwd~~~~ 340 (719)
|++|+ |..+.+|++.+.
T Consensus 287 ~asg~-~~g~~~~~~~~~ 303 (304)
T 2ynn_A 287 IASGF-DNGFTVLSLGND 303 (304)
T ss_dssp EEEEE-TTEEEEEECC--
T ss_pred EEEec-CCceEEEEeccC
Confidence 67766 666888887653
No 8
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.7e-39 Score=349.93 Aligned_cols=302 Identities=19% Similarity=0.301 Sum_probs=251.0
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
|.+.|++++|+|||++||+|+.||.| +|||+..+..... ...|...|.+++|++++ .
T Consensus 65 H~~~V~~~~~sp~~~~l~s~s~D~~v----------~iWd~~~~~~~~~-----~~~h~~~v~~~~~s~~g--------~ 121 (380)
T 3iz6_a 65 HSGKVYSLDWTPEKNWIVSASQDGRL----------IVWNALTSQKTHA-----IKLHCPWVMECAFAPNG--------Q 121 (380)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEE----------EEEETTTTEEEEE-----EECCCTTCCCCEECTTS--------S
T ss_pred cccEEEEEEEcCCCCEEEEEeCCCeE----------EEEECCCCccceE-----EecCCCCEEEEEECCCC--------C
Confidence 66889999999999999999988877 8898875543322 24588899999999998 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|++|+.|+.|++||+..... ..........+.+|.+.|.++.|++.++.+|++|+.|++|++||+.+++....+.
T Consensus 122 ~las~~~d~~v~iw~~~~~~~--~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~-- 197 (380)
T 3iz6_a 122 SVACGGLDSACSIFNLSSQAD--RDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFG-- 197 (380)
T ss_dssp EEEECCSSSCCEEEECCCCSS--CCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEEC--
T ss_pred EEEEeeCCCcEEEEECCCCcc--ccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEee--
Confidence 999999999999999854221 1111245567889999999999999667789999999999999999887654431
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC-CceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK-QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~-~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
.....+|...|.+++|++.+..+|++|+.||+|++||++. ++.+..+. +|...|.+++|+|++ .+|++++.|+ +
T Consensus 198 ~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~-~h~~~v~~v~~~p~~-~~l~s~s~D~---~ 272 (380)
T 3iz6_a 198 SEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH-GHEGDINSVKFFPDG-QRFGTGSDDG---T 272 (380)
T ss_dssp CCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC-CCSSCCCEEEECTTS-SEEEEECSSS---C
T ss_pred cccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC-CcCCCeEEEEEecCC-CeEEEEcCCC---e
Confidence 1122467889999999885557999999999999999984 56677776 899999999999998 5899999998 9
Q ss_pred EEEEecCCCCCceEEeeCCC-------CCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEe----cCCCCCeEEe
Q 046451 245 LRLWDMRNTMSPVKEFVGHT-------KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSEL----PAGTNWNFDI 313 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~-------~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l----~~h~~~v~~l 313 (719)
|++||++++ ..+..+..+. ..|++++|++ ++++|++|+.||.|+|||+.+++.+..+ .+|.+.|+++
T Consensus 273 i~lwd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l 350 (380)
T 3iz6_a 273 CRLFDMRTG-HQLQVYNREPDRNDNELPIVTSVAFSI-SGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCL 350 (380)
T ss_dssp EEEEETTTT-EEEEEECCCCSSSCCSSCSCSEEEECS-SSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEE
T ss_pred EEEEECCCC-cEEEEecccccccccccCceEEEEECC-CCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEE
Confidence 999999875 4455554432 3489999999 9999999999999999999999988877 6799999999
Q ss_pred EEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 314 HWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 314 ~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
+|++++ .+|++|+.|++|+||++.+.+.
T Consensus 351 ~~s~dg-~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 351 GLSSDG-SALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp EECSSS-SEEEEECTTSCEEEEECCSSSS
T ss_pred EECCCC-CEEEEeeCCCCEEEEecCCCcc
Confidence 999999 7999999999999999987643
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.3e-38 Score=339.06 Aligned_cols=285 Identities=17% Similarity=0.296 Sum_probs=244.8
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
|.+.|.+++|++|+++|++|+.||.| +|||+........ ...|...|.+++|++++ .
T Consensus 54 H~~~v~~~~~s~d~~~l~s~s~Dg~v----------~iWd~~~~~~~~~-----~~~~~~~v~~~~~s~~~--------~ 110 (340)
T 1got_B 54 HLAKIYAMHWGTDSRLLLSASQDGKL----------IIWDSYTTNKVHA-----IPLRSSWVMTCAYAPSG--------N 110 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTTEE----------EEEETTTCCEEEE-----EECSSSCEEEEEECTTS--------S
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcE----------EEEECCCCCcceE-----eecCCccEEEEEECCCC--------C
Confidence 66899999999999999999988877 7888775543322 23478889999999998 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|++|+.|+.|++|++.... ........+.+|.+.|.++.|++ + ..|++++.|+.|++||+.+++....+
T Consensus 111 ~l~s~~~d~~v~iw~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~~-~-~~l~s~s~d~~i~~wd~~~~~~~~~~--- 180 (340)
T 1got_B 111 YVACGGLDNICSIYNLKTRE-----GNVRVSRELAGHTGYLSCCRFLD-D-NQIVTSSGDTTCALWDIETGQQTTTF--- 180 (340)
T ss_dssp EEEEEETTCEEEEEETTTCS-----BSCEEEEEEECCSSCEEEEEEEE-T-TEEEEEETTSCEEEEETTTTEEEEEE---
T ss_pred EEEEEeCCCeEEEEECccCC-----CcceeEEEecCCCccEEEEEECC-C-CcEEEEECCCcEEEEECCCCcEEEEE---
Confidence 99999999999999985321 11145567889999999999987 4 46999999999999999987655442
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
.+|...|.+++|++++ .+|++++.||+|++||+++++.+..+. .|...|.+++|+|++ .+|++++.|+ +|
T Consensus 181 ----~~h~~~v~~~~~~~~~-~~l~sg~~d~~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~p~~-~~l~s~s~d~---~v 250 (340)
T 1got_B 181 ----TGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTFT-GHESDINAICFFPNG-NAFATGSDDA---TC 250 (340)
T ss_dssp ----CCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCSEEEEEC-CCSSCEEEEEECTTS-SEEEEEETTS---CE
T ss_pred ----cCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeeEEEEc-CCcCCEEEEEEcCCC-CEEEEEcCCC---cE
Confidence 3578899999999997 699999999999999999999998888 899999999999998 5899999998 99
Q ss_pred EEEecCCCCCceEEee--CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEE
Q 046451 246 RLWDMRNTMSPVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVI 323 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~--~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~l 323 (719)
++||+++. ..+..+. .+...|.+++|++ ++.+|++|+.|+.|++||+.+++.+..+.+|...|.+++|++++ .+|
T Consensus 251 ~iwd~~~~-~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg-~~l 327 (340)
T 1got_B 251 RLFDLRAD-QELMTYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDG-MAV 327 (340)
T ss_dssp EEEETTTT-EEEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-SCE
T ss_pred EEEECCCC-cEEEEEccCCcccceEEEEECC-CCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCC-CEE
Confidence 99999875 3444443 2335799999999 99999999999999999999999999999999999999999999 799
Q ss_pred EEEeCCCcEEEEe
Q 046451 324 SASSFDGKIGIYN 336 (719)
Q Consensus 324 as~s~Dg~I~iwd 336 (719)
++|+.|+.|+|||
T Consensus 328 ~s~s~D~~i~iWd 340 (340)
T 1got_B 328 ATGSWDSFLKIWN 340 (340)
T ss_dssp EEEETTSCEEEEC
T ss_pred EEEcCCccEEecC
Confidence 9999999999997
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=340.69 Aligned_cols=297 Identities=19% Similarity=0.341 Sum_probs=240.0
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEE
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVA 88 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~la 88 (719)
.|++++|||||++||+|+.||.| +|||+..+..... .....+|...|++++|++++ ++|+
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i----------~iw~~~~~~~~~~--~~~~~~h~~~v~~~~~sp~g--------~~l~ 77 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRI----------RIWGTEGDSWICK--SVLSEGHQRTVRKVAWSPCG--------NYLA 77 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCE----------EEEEEETTEEEEE--EEECSSCSSCEEEEEECTTS--------SEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeE----------EEEEcCCCcceee--eeeccccCCcEEEEEECCCC--------CEEE
Confidence 79999999999999999988877 8898875432111 12235689999999999998 7999
Q ss_pred EEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCC
Q 046451 89 GGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGN 168 (719)
Q Consensus 89 sgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~ 168 (719)
+|+.|+.|+|||+.. .+. ..+..+.+|.+.|.+++|++ ++++|++|+.|+.|+|||+.+......+ ..
T Consensus 78 s~s~D~~v~iw~~~~----~~~---~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~----~~ 145 (345)
T 3fm0_A 78 SASFDATTCIWKKNQ----DDF---ECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECV----SV 145 (345)
T ss_dssp EEETTSCEEEEEECC----C-E---EEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEE----EE
T ss_pred EEECCCcEEEEEccC----CCe---EEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEE----EE
Confidence 999999999999843 111 45678899999999999999 8899999999999999999876543221 11
Q ss_pred CCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc--eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEE
Q 046451 169 GSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK--PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALR 246 (719)
Q Consensus 169 ~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~ 246 (719)
...|...|.+++|++++ .+|++++.|++|++||+++++ +...+. .|...|.+++|++++ .+|++++.|+ +|+
T Consensus 146 ~~~h~~~v~~~~~~p~~-~~l~s~s~d~~i~~w~~~~~~~~~~~~~~-~h~~~v~~l~~sp~g-~~l~s~s~D~---~v~ 219 (345)
T 3fm0_A 146 LNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLYREEEDDWVCCATLE-GHESTVWSLAFDPSG-QRLASCSDDR---TVR 219 (345)
T ss_dssp ECCCCSCEEEEEECSSS-SCEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECTTS-SEEEEEETTS---CEE
T ss_pred ecCcCCCeEEEEECCCC-CEEEEEeCCCcEEEEEecCCCEEEEEEec-CCCCceEEEEECCCC-CEEEEEeCCC---eEE
Confidence 23578899999999997 589999999999999998875 345566 799999999999998 5899999998 999
Q ss_pred EEecCCCCC--------------ceEEeeC-CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe---------EEEE
Q 046451 247 LWDMRNTMS--------------PVKEFVG-HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE---------IVSE 302 (719)
Q Consensus 247 lwDl~~~~~--------------~~~~~~~-h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~---------~~~~ 302 (719)
|||...... ++..+.+ |...|.+++|++ ++.+|++++.|+.|++||...+. ....
T Consensus 220 iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~ 298 (345)
T 3fm0_A 220 IWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQ-LTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHL 298 (345)
T ss_dssp EEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECT-TTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEE
T ss_pred EeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEec-CCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeee
Confidence 999743221 2334444 888999999999 88999999999999999986542 1233
Q ss_pred ecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 303 LPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 303 l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+.+|...|++++|+|+++.+|++|+.||+|+||++.+.+...
T Consensus 299 ~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~ 340 (345)
T 3fm0_A 299 HQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLH 340 (345)
T ss_dssp TTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-----
T ss_pred cccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcc
Confidence 468999999999999986799999999999999999877644
No 11
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.1e-38 Score=337.31 Aligned_cols=290 Identities=15% Similarity=0.255 Sum_probs=246.4
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.|.+.|.+++|++|+++||+|+.||.| +|||.........+ ..+...|.+++|++++
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v----------~vWd~~~~~~~~~~-----~~~~~~v~~~~~sp~g-------- 118 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDGKV----------IVWDSFTTNKEHAV-----TMPCTWVMACAYAPSG-------- 118 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEE----------EEEETTTCCEEEEE-----ECSSSCCCEEEECTTS--------
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCeE----------EEEECCCCCcceEE-----ecCCCCEEEEEECCCC--------
Confidence 367889999999999999999988877 78887654433322 3467789999999998
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
.+|++|+.|+.|++|++........ ......+..|.+.|.+++|++ ++..|++++.|++|++||+.+++....+
T Consensus 119 ~~lasg~~d~~i~v~~~~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~~~~-- 192 (354)
T 2pbi_B 119 CAIACGGLDNKCSVYPLTFDKNENM---AAKKKSVAMHTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQLLQSF-- 192 (354)
T ss_dssp SEEEEESTTSEEEEEECCCCTTCCS---GGGCEEEEECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEE--
T ss_pred CEEEEeeCCCCEEEEEEeccccccc---cccceeeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEEEEE--
Confidence 7999999999999999853211111 145567788999999999999 7889999999999999999988765442
Q ss_pred ccCCCCCCCCCeEEEEecCCC-CcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC
Q 046451 165 LRGNGSAAQGEISFVSWNSKV-QHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g-~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~ 243 (719)
.+|...|.+++|+++. .++|++|+.||+|++||+++++++..+. .|...|.+++|+|++ .+|++++.|+
T Consensus 193 -----~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~p~~-~~l~s~s~D~--- 262 (354)
T 2pbi_B 193 -----HGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE-THESDVNSVRYYPSG-DAFASGSDDA--- 262 (354)
T ss_dssp -----ECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTS-SEEEEEETTS---
T ss_pred -----cCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCCeEEEEEeCCC-CEEEEEeCCC---
Confidence 3477899999998752 3699999999999999999999998887 799999999999998 5899999998
Q ss_pred cEEEEecCCCCCceEEeeC--CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCC
Q 046451 244 ALRLWDMRNTMSPVKEFVG--HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPG 321 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~--h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~ 321 (719)
+|++||++.. ..+..+.. +...+.+++|++ ++.+|++|+.|+.|+|||+.+++.+..+.+|.+.|++++|+|++ .
T Consensus 263 ~v~lwd~~~~-~~~~~~~~~~~~~~~~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg-~ 339 (354)
T 2pbi_B 263 TCRLYDLRAD-REVAIYSKESIIFGASSVDFSL-SGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDG-T 339 (354)
T ss_dssp CEEEEETTTT-EEEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTS-S
T ss_pred eEEEEECCCC-cEEEEEcCCCcccceeEEEEeC-CCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCC-C
Confidence 9999999875 33444443 335789999999 99999999999999999999999999999999999999999999 7
Q ss_pred EEEEEeCCCcEEEEe
Q 046451 322 VISASSFDGKIGIYN 336 (719)
Q Consensus 322 ~las~s~Dg~I~iwd 336 (719)
+|++++.|++|+||+
T Consensus 340 ~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 340 AFCSGSWDHTLRVWA 354 (354)
T ss_dssp CEEEEETTSEEEEEC
T ss_pred EEEEEcCCCCEEecC
Confidence 999999999999996
No 12
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.5e-37 Score=357.83 Aligned_cols=290 Identities=13% Similarity=0.228 Sum_probs=243.0
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
+.+.+.+++|||||++||+++ ++ .++||++........ ..+|...|++++|+|+| +
T Consensus 17 ~~g~~~~~~~spdg~~l~~~~-~~----------~v~l~~~~~~~~~~~-----~~~h~~~v~~~~~spdg--------~ 72 (611)
T 1nr0_A 17 ARGTAVVLGNTPAGDKIQYCN-GT----------SVYTVPVGSLTDTEI-----YTEHSHQTTVAKTSPSG--------Y 72 (611)
T ss_dssp CTTCCCCCEECTTSSEEEEEE-TT----------EEEEEETTCSSCCEE-----ECCCSSCEEEEEECTTS--------S
T ss_pred ccCceeEEeeCCCCCEEEeCC-CC----------EEEEecCCCcccCeE-----ecCCCCceEEEEECCCC--------c
Confidence 346788999999999999986 23 348999875443322 25689999999999998 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC----CcEEEEcCCCCCCCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD----GEICIWDLSAPAEPSH 161 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d----g~I~iwdl~~~~~~~~ 161 (719)
+||+|+.||+|+|||+.. .+. .....+..|.+.|.+++|++ ++++|++++.+ +.|++||.. .....
T Consensus 73 ~lasg~~d~~v~lWd~~~----~~~---~~~~~~~~~~~~v~~v~fs~-dg~~l~~~~~~~~~~~~v~~wd~~--~~~~~ 142 (611)
T 1nr0_A 73 YCASGDVHGNVRIWDTTQ----TTH---ILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRERFGHVFLFDTG--TSNGN 142 (611)
T ss_dssp EEEEEETTSEEEEEESSS----TTC---CEEEEEECSSSCEEEEEECT-TSCEEEEEECCSSCSEEEEETTTC--CBCBC
T ss_pred EEEEEeCCCCEEEeECCC----Ccc---eeeEeecccCCceEEEEECC-CCCEEEEEECCCCceeEEEEeeCC--CCcce
Confidence 999999999999999842 122 44567888999999999999 78899888765 478888853 32222
Q ss_pred cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCC
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS 241 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~ 241 (719)
..+|...|++++|++++..+|++++.|++|++||.++++.+..+. .|...|.+++|+|+| .+|++++.|+
T Consensus 143 -------l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~-~H~~~V~~v~fspdg-~~las~s~D~- 212 (611)
T 1nr0_A 143 -------LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG-EHTKFVHSVRYNPDG-SLFASTGGDG- 212 (611)
T ss_dssp -------CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC-CCSSCEEEEEECTTS-SEEEEEETTS-
T ss_pred -------ecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec-cccCceEEEEECCCC-CEEEEEECCC-
Confidence 346888999999999986679999999999999999988888887 899999999999998 5899999998
Q ss_pred CCcEEEEecCCCCCceEEee-------CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEE------------
Q 046451 242 SPALRLWDMRNTMSPVKEFV-------GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSE------------ 302 (719)
Q Consensus 242 ~~~I~lwDl~~~~~~~~~~~-------~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~------------ 302 (719)
+|+|||++++ +.+..+. +|...|.+++|+| ++++|++++.|++|+|||+.+++.+.+
T Consensus 213 --~i~lwd~~~g-~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~ 288 (611)
T 1nr0_A 213 --TIVLYNGVDG-TKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQL 288 (611)
T ss_dssp --CEEEEETTTC-CEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEE
T ss_pred --cEEEEECCCC-cEeeeeccccccccccCCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeE
Confidence 9999999775 4556663 7999999999999 999999999999999999998765543
Q ss_pred -------------------------------ecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 303 -------------------------------LPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 303 -------------------------------l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+.+|...|++++|++++ .+|++++.|++|++||+.+++...
T Consensus 289 ~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg-~~l~s~s~D~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 289 GIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADG-KTLFSADAEGHINSWDISTGISNR 360 (611)
T ss_dssp EEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEE
T ss_pred EEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC-CEEEEEeCCCcEEEEECCCCceee
Confidence 34788899999999999 799999999999999999887644
No 13
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.8e-38 Score=339.34 Aligned_cols=294 Identities=20% Similarity=0.333 Sum_probs=241.4
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCccccee-------------ecccCCCCCceee
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLL-------------VGESPSSERFNRL 70 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~-------------~~~~~~~~~V~~l 70 (719)
+.|.+.|.+++|||||++||+|+ ++.+ +||++..+.....+.. .....+...|+++
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v----------~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v 129 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTT----------QVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSV 129 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCE----------EEEETTTCCEEEEECC-----------------CCCCBEEEE
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcE----------EEEEecCCCEEEEecCccccccccccccccccCCCceeEEEE
Confidence 35778999999999999999985 4555 6666654332211110 0011233458999
Q ss_pred eecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEE
Q 046451 71 AWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICI 150 (719)
Q Consensus 71 ~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~i 150 (719)
+|++++ ++|++|+.||.|+|||+ .++ +.+..+.+|...|.+++|++ ++++|++++.|++|++
T Consensus 130 ~~s~dg--------~~l~s~~~d~~i~iwd~------~~~---~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~i 191 (393)
T 1erj_A 130 CFSPDG--------KFLATGAEDRLIRIWDI------ENR---KIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRI 191 (393)
T ss_dssp EECTTS--------SEEEEEETTSCEEEEET------TTT---EEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEE
T ss_pred EECCCC--------CEEEEEcCCCeEEEEEC------CCC---cEEEEEccCCCCEEEEEEcC-CCCEEEEecCCCcEEE
Confidence 999998 79999999999999999 445 77788999999999999999 7899999999999999
Q ss_pred EcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec------CCCCCceeEEE
Q 046451 151 WDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS------ESIKRRCSVLQ 224 (719)
Q Consensus 151 wdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~------~~~~~~i~~l~ 224 (719)
||+.+++....+ .+...+.+++|++.++.+|++++.||.|++||+++++.+..+. ..|...|.+++
T Consensus 192 wd~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 263 (393)
T 1erj_A 192 WDLRTGQCSLTL--------SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVV 263 (393)
T ss_dssp EETTTTEEEEEE--------ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEE
T ss_pred EECCCCeeEEEE--------EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEE
Confidence 999987654332 1345799999999445799999999999999999998877663 26888999999
Q ss_pred ECCCCCcEEEEEeCCCCCCcEEEEecCCCC-----------CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEE
Q 046451 225 WNPDVATQLVVASDEDSSPALRLWDMRNTM-----------SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293 (719)
Q Consensus 225 ~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~-----------~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd 293 (719)
|++++ .+|++++.|+ .|++||+++.. .+...+.+|...|.+++|++ ++.+|++|+.|+.|++||
T Consensus 264 ~~~~g-~~l~s~s~d~---~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd 338 (393)
T 1erj_A 264 FTRDG-QSVVSGSLDR---SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWD 338 (393)
T ss_dssp ECTTS-SEEEEEETTS---EEEEEEC---------------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEE
T ss_pred ECCCC-CEEEEEeCCC---EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEE
Confidence 99998 5789999998 99999997532 34567789999999999999 899999999999999999
Q ss_pred CCCCeEEEEecCCCCCeEEeEEcC------CCCCEEEEEeCCCcEEEEeCCCC
Q 046451 294 TVSGEIVSELPAGTNWNFDIHWYP------KIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 294 ~~~~~~~~~l~~h~~~v~~l~~sp------dg~~~las~s~Dg~I~iwd~~~~ 340 (719)
+.+++.+..+.+|...|.+++|++ ++ .+|++|+.||+|+||++...
T Consensus 339 ~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~-~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 339 KKSGNPLLMLQGHRNSVISVAVANGSSLGPEY-NVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSCTTCTTC-EEEEEEETTSEEEEEEEEEC
T ss_pred CCCCeEEEEECCCCCCEEEEEecCCcCcCCCC-CEEEEECCCCcEEECccccc
Confidence 999999999999999999999987 45 69999999999999998653
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.4e-37 Score=323.47 Aligned_cols=287 Identities=20% Similarity=0.388 Sum_probs=246.1
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.|.+.|.+++|+|||++||+|+.||.| ++|++..+.... ....|...|.+++|++++
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i----------~iw~~~~~~~~~-----~~~~h~~~v~~~~~~~~~-------- 77 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLI----------KIWGAYDGKFEK-----TISGHKLGISDVAWSSDS-------- 77 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCE----------EEEETTTCCEEE-----EECCCSSCEEEEEECTTS--------
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeE----------EEEeCCCcccch-----hhccCCCceEEEEEcCCC--------
Confidence 466889999999999999999988877 788876543322 224688999999999998
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
++|++|+.||.|++||+ .++ +.+..+.+|...|.+++|++ ++++|++|+.|+.|++||+++.+....+
T Consensus 78 ~~l~s~~~d~~i~vwd~------~~~---~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~-- 145 (312)
T 4ery_A 78 NLLVSASDDKTLKIWDV------SSG---KCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTL-- 145 (312)
T ss_dssp SEEEEEETTSEEEEEET------TTC---CEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEE--
T ss_pred CEEEEECCCCEEEEEEC------CCC---cEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEe--
Confidence 79999999999999999 455 77888999999999999999 7899999999999999999987654442
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
..|...|.+++|++++ .+|++++.||.|++||+++++.+..+...+...+..++|++++ .+|++++.|+ .
T Consensus 146 -----~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~---~ 215 (312)
T 4ery_A 146 -----PAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDN---T 215 (312)
T ss_dssp -----CCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTS-SEEEEEETTT---E
T ss_pred -----cCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCC-CEEEEEcCCC---e
Confidence 3467789999999997 5999999999999999999998888765677889999999998 5788888888 9
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeE--EEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCE
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIA--MSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGV 322 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~--v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~ 322 (719)
|++||+++. +.+..+.+|...+.+ ..|+..++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++ .+
T Consensus 216 i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~ 293 (312)
T 4ery_A 216 LKLWDYSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NI 293 (312)
T ss_dssp EEEEETTTT-EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSS-SE
T ss_pred EEEEECCCC-cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcC-Cc
Confidence 999999875 567778888765432 34444378999999999999999999999999999999999999999999 78
Q ss_pred EEEEe--CCCcEEEEeCC
Q 046451 323 ISASS--FDGKIGIYNIE 338 (719)
Q Consensus 323 las~s--~Dg~I~iwd~~ 338 (719)
|++++ .|+.|+||+.+
T Consensus 294 l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 294 IASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEECTTTCCEEEEECC
T ss_pred eEEEEccCCccEEEecCC
Confidence 88886 69999999965
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.1e-37 Score=322.30 Aligned_cols=290 Identities=13% Similarity=0.221 Sum_probs=243.9
Q ss_pred cccCccceEEEcCCC-CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 5 KGINRSASVAFAPDA-PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 5 ~~~~~V~~vafSpdg-~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
.|.+.|.+++|++++ ++|++|+.||.| ++|++..........+....+|...|++++|++++
T Consensus 15 gH~~~V~~l~~~~~~~~~l~s~s~D~~v----------~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg------- 77 (319)
T 3frx_A 15 GHNGWVTSLATSAGQPNLLLSASRDKTL----------ISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADG------- 77 (319)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEE----------EEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTS-------
T ss_pred cccceEEEEEccCCCccEEEEecCCccE----------EEecCCCCCccccccceEEeCCcccEEEEEECCCC-------
Confidence 367889999999976 899999988877 88998754433223334456799999999999998
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
.+|++|+.|++|+|||+ .++ +.+..+.+|...|.+++|++ ++.+|++|+.|++|+|||++.. ....
T Consensus 78 -~~l~s~s~D~~v~~wd~------~~~---~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~~-~~~~-- 143 (319)
T 3frx_A 78 -AYALSASWDKTLRLWDV------ATG---ETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIKGQ-CLAT-- 143 (319)
T ss_dssp -SEEEEEETTSEEEEEET------TTT---EEEEEEECCSSCEEEEEECT-TSCEEEEEETTSCEEEEETTSC-EEEE--
T ss_pred -CEEEEEeCCCEEEEEEC------CCC---CeeEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCC-eEEE--
Confidence 79999999999999999 556 77888999999999999999 8899999999999999999643 2211
Q ss_pred CccCCCCCCCCCeEEEEecCCC-----CcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKV-----QHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASD 238 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g-----~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~ 238 (719)
..+|...|.++.|++.. ..+|++++.|++|++||+++.+....+. .|...|.+++|+|++ .+|++++.
T Consensus 144 -----~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~sp~g-~~l~s~~~ 216 (319)
T 3frx_A 144 -----LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI-GHNSNINTLTASPDG-TLIASAGK 216 (319)
T ss_dssp -----ECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC-CCCSCEEEEEECTTS-SEEEEEET
T ss_pred -----EeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeec-CCCCcEEEEEEcCCC-CEEEEEeC
Confidence 23578899999999853 2489999999999999999998888887 899999999999998 58999999
Q ss_pred CCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC--------CCCCe
Q 046451 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA--------GTNWN 310 (719)
Q Consensus 239 d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~--------h~~~v 310 (719)
|+ .|+|||+++. +.+..+..+ ..|.+++|+| ++.+|++++. +.+++|++..+..+..+.. |...+
T Consensus 217 dg---~i~iwd~~~~-~~~~~~~~~-~~v~~~~~sp-~~~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v 289 (319)
T 3frx_A 217 DG---EIMLWNLAAK-KAMYTLSAQ-DEVFSLAFSP-NRYWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHA 289 (319)
T ss_dssp TC---EEEEEETTTT-EEEEEEECC-SCEEEEEECS-SSSEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCE
T ss_pred CC---eEEEEECCCC-cEEEEecCC-CcEEEEEEcC-CCCEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcce
Confidence 98 9999999875 556666654 6899999999 8888888775 4599999988877776643 35678
Q ss_pred EEeEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 046451 311 FDIHWYPKIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 311 ~~l~~spdg~~~las~s~Dg~I~iwd~~~~ 340 (719)
.+++|+||| .+|++|+.||.|+|||+.++
T Consensus 290 ~~~~~spdg-~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 290 VSLAWSADG-QTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEECTTS-SEEEEEETTSCEEEEEEEEC
T ss_pred eEEEECCCC-CEEEEeecCceEEEEEEeec
Confidence 999999999 79999999999999999764
No 16
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.6e-36 Score=321.71 Aligned_cols=294 Identities=15% Similarity=0.270 Sum_probs=237.9
Q ss_pred cccCccceEEE-----cC-CCCeEEEeeccceeecccCCCceEEEEEeeccCCccc--ceeecccCCCCCceeeeecCCC
Q 046451 5 KGINRSASVAF-----AP-DAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRD--LLLVGESPSSERFNRLAWGKNG 76 (719)
Q Consensus 5 ~~~~~V~~vaf-----Sp-dg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~--~~~~~~~~~~~~V~~l~~sp~g 76 (719)
.|.+.|++++| ++ |+++||+|+.||.| +|||+........ .......+|...|++++|++++
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v----------~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~ 88 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTV----------MIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN 88 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCE----------EEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcCCCEE----------EEEECCcCCcccccccccchhccCCCceEEEEECCCC
Confidence 36688999999 77 99999999988877 8899875432211 1123345799999999999998
Q ss_pred CCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCC
Q 046451 77 SGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAP 156 (719)
Q Consensus 77 ~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~ 156 (719)
.+|++|+.|+.|+|||+ .++ ..+..+.+|.+.|.+++|++ ++++|++++.|++|++||+...
T Consensus 89 --------~~l~s~s~D~~v~lwd~------~~~---~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~ 150 (343)
T 2xzm_R 89 --------CFAISSSWDKTLRLWDL------RTG---TTYKRFVGHQSEVYSVAFSP-DNRQILSAGAEREIKLWNILGE 150 (343)
T ss_dssp --------TEEEEEETTSEEEEEET------TSS---CEEEEEECCCSCEEEEEECS-STTEEEEEETTSCEEEEESSSC
T ss_pred --------CEEEEEcCCCcEEEEEC------CCC---cEEEEEcCCCCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCC
Confidence 79999999999999999 555 77888999999999999999 8899999999999999999743
Q ss_pred CCCCccCCccCCCCCCCCCeEEEEecCCCC---------cEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECC
Q 046451 157 AEPSHFPPLRGNGSAAQGEISFVSWNSKVQ---------HILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNP 227 (719)
Q Consensus 157 ~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~---------~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp 227 (719)
... . ......|...|.+++|++++. .+|++++.||+|++||. +.+....+. .|...|.+++|++
T Consensus 151 ~~~-~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~-~h~~~v~~~~~s~ 223 (343)
T 2xzm_R 151 CKF-S----SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFK-AHESNVNHLSISP 223 (343)
T ss_dssp EEE-E----CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEE-CCSSCEEEEEECT
T ss_pred cee-e----eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEc-CccccceEEEECC
Confidence 211 1 111235778999999999862 58999999999999994 456666666 7899999999999
Q ss_pred CCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEE--Eec-
Q 046451 228 DVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS--ELP- 304 (719)
Q Consensus 228 ~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~--~l~- 304 (719)
+| .+|++++.|+ .|++||+++.......+. +...|.+++|+| ++.+|+ ++.|+.|++||+.+++... .+.
T Consensus 224 ~g-~~l~sgs~dg---~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp-~~~~la-~~~d~~v~iw~~~~~~~~~~~~~~~ 296 (343)
T 2xzm_R 224 NG-KYIATGGKDK---KLLIWDILNLTYPQREFD-AGSTINQIAFNP-KLQWVA-VGTDQGVKIFNLMTQSKAPVCTIEA 296 (343)
T ss_dssp TS-SEEEEEETTC---EEEEEESSCCSSCSEEEE-CSSCEEEEEECS-SSCEEE-EEESSCEEEEESSSCCSCSEEECCC
T ss_pred CC-CEEEEEcCCC---eEEEEECCCCcccceeec-CCCcEEEEEECC-CCCEEE-EECCCCEEEEEeCCCCCCceEEeec
Confidence 98 5799999998 999999966545555553 456799999999 777765 5568889999998765433 443
Q ss_pred ----------CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 305 ----------AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 305 ----------~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
+|...|.+++|++++ .+|++|+.||.|++|+++++.
T Consensus 297 ~~~~~~~~~~~~~~~v~~~~~sp~g-~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 297 EPITKAEGQKGKNPQCTSLAWNALG-KKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp CSGGGBTTBCCSCCCEEEEEECSSS-CCEEEEETTSEEEEEEEEEEE
T ss_pred CcchhhhhhcCCCCceEEEEECCCC-CeEEEecCCceEEEEEEEccC
Confidence 677889999999999 799999999999999987653
No 17
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-36 Score=321.14 Aligned_cols=299 Identities=17% Similarity=0.325 Sum_probs=226.8
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
|.+.|.+++|+++ +||+|+.||.| +|||+..+... .........|...|++++|++++ .
T Consensus 13 h~~~v~~~~~s~~--~las~~~D~~i----------~lw~~~~~~~~-~~~~~~~~~h~~~v~~v~~sp~~--------~ 71 (330)
T 2hes_X 13 YKEKIWSFDFSQG--ILATGSTDRKI----------KLVSVKYDDFT-LIDVLDETAHKKAIRSVAWRPHT--------S 71 (330)
T ss_dssp CSSCEEEEEEETT--EEEEEESSSCE----------EEEECSSSCCE-EEEEECTTCCCSCEEEEEECTTS--------S
T ss_pred CCCceeeeccCCC--EEEEEcCCCEE----------EEEEecCCCeE-EEEEEecCCccCCEEEEEECCCC--------C
Confidence 6688999999998 99999988877 88988753211 11111122388999999999998 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|++|+.|+.|+|||+..... .......+..+.+|.+.|.+++|++ ++++|++|+.|++|+|||+........ .
T Consensus 72 ~las~s~D~~v~iw~~~~~~~--~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~---~ 145 (330)
T 2hes_X 72 LLAAGSFDSTVSIWAKEESAD--RTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYE---C 145 (330)
T ss_dssp EEEEEETTSCEEEEEC---------CCCEEEEEEC----CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCE---E
T ss_pred EEEEEeCCCcEEEEEcccCcC--ccccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeE---E
Confidence 999999999999999843110 0001145677889999999999999 789999999999999999954322111 1
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC--ceeEEecCCCCCceeEEEECCCC-CcEEEEEeCCCCC
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ--KPVISFSESIKRRCSVLQWNPDV-ATQLVVASDEDSS 242 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~--~~~~~~~~~~~~~i~~l~~sp~g-~~~l~~~s~d~~~ 242 (719)
......|...|.+++|++++ .+|++++.|++|++||++++ +++..+. +|...|.+++|++++ ..+|++++.|+
T Consensus 146 ~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~iW~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~s~D~-- 221 (330)
T 2hes_X 146 ISVLQEHSQDVKHVIWHPSE-ALLASSSYDDTVRIWKDYDDDWECVAVLN-GHEGTVWSSDFDKTEGVFRLCSGSDDS-- 221 (330)
T ss_dssp EEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCSSSSCEEEEEETTS--
T ss_pred EEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCCCCeeEEEEcc-CCCCcEEEEEecCCCCeeEEEEEeCCC--
Confidence 11224578899999999997 69999999999999999876 5667777 899999999999984 25789999998
Q ss_pred CcEEEEecCCCC-------CceEEeeC-CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe--EEEE-ecCCCC-Ce
Q 046451 243 PALRLWDMRNTM-------SPVKEFVG-HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE--IVSE-LPAGTN-WN 310 (719)
Q Consensus 243 ~~I~lwDl~~~~-------~~~~~~~~-h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~--~~~~-l~~h~~-~v 310 (719)
+|++||++... .....+.+ |...|.+++|++ + .+|++++.||.|+|||..+++ .+.. +.+|.. .|
T Consensus 222 -~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~-~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v 298 (330)
T 2hes_X 222 -TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGF-N-GLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEI 298 (330)
T ss_dssp -CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECT-T-SCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCE
T ss_pred -eEEEEEecCCCccccceeEEeeecccccccceEEEEEcC-C-CEEEEEeCCCEEEEEEcCCCceEEEeccccccccceE
Confidence 99999986532 12334444 899999999996 4 489999999999999998874 3333 457876 89
Q ss_pred EEeEEcC--CCCCEEEEEeCCCcEEEEeCCC
Q 046451 311 FDIHWYP--KIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 311 ~~l~~sp--dg~~~las~s~Dg~I~iwd~~~ 339 (719)
.+++|++ ++ .+|++++.||+|+|||++.
T Consensus 299 ~~v~~~~~~~~-~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 299 NVVKWLELNGK-TILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEEC------CCEEEEETTSEEEEEEC--
T ss_pred EEEEEecCCCc-eEEEEecCCCcEEEEEecc
Confidence 9999999 55 7999999999999999875
No 18
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4e-36 Score=314.63 Aligned_cols=254 Identities=19% Similarity=0.309 Sum_probs=224.2
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
.+|.+.|++++|+|++ .+|++++.||.|+|||+ .++ ..+..+..|...|.+++|++ ++++|+
T Consensus 10 ~~h~~~V~~~~fsp~~--------~~l~s~~~dg~v~lWd~------~~~---~~~~~~~~~~~~v~~~~~~~-~~~~l~ 71 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTE--------PWVLTTLYSGRVELWNY------ETQ---VEVRSIQVTETPVRAGKFIA-RKNWII 71 (304)
T ss_dssp EEECSCEEEEEECSSS--------SEEEEEETTSEEEEEET------TTT---EEEEEEECCSSCEEEEEEEG-GGTEEE
T ss_pred cCCCCceEEEEECCCC--------CEEEEEcCCCcEEEEEC------CCC---ceeEEeeccCCcEEEEEEeC-CCCEEE
Confidence 4588999999999998 79999999999999999 455 77888999999999999999 889999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCcee-EEecCCCCCc
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPV-ISFSESIKRR 219 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~-~~~~~~~~~~ 219 (719)
+|+.|+.|++||+.+++....+ ..|.+.|.+++|++++ .+|++++.||+|++||++++... ..+. .|...
T Consensus 72 s~s~d~~i~vwd~~~~~~~~~~-------~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~~~~~~~-~h~~~ 142 (304)
T 2ynn_A 72 VGSDDFRIRVFNYNTGEKVVDF-------EAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFE-GHEHF 142 (304)
T ss_dssp EEETTSEEEEEETTTCCEEEEE-------ECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGGTTEEEEEEC-CCCSC
T ss_pred EECCCCEEEEEECCCCcEEEEE-------eCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCCCcchhhhhc-ccCCc
Confidence 9999999999999988765442 3578899999999997 59999999999999999987544 4455 89999
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCC-CCCeEEEEeCCCcEEEEECCCCe
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPN-DSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~-d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
|.+++|+|++..+|++++.|+ +|++||+++.........+|...+..+.|++. ++.+|++++.|++|+|||+++++
T Consensus 143 v~~v~~~p~~~~~l~sgs~D~---~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~ 219 (304)
T 2ynn_A 143 VMCVAFNPKDPSTFASGCLDR---TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (304)
T ss_dssp EEEEEECTTCTTEEEEEETTS---EEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE
T ss_pred EEEEEECCCCCCEEEEEeCCC---eEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc
Confidence 999999996557899999998 99999998765544555567788999999862 56799999999999999999999
Q ss_pred EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccccc
Q 046451 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345 (719)
Q Consensus 299 ~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~ 345 (719)
++.++.+|...|.+++|+|++ .+|++++.||+|+|||+.+++....
T Consensus 220 ~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~Dg~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 220 CVATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYKVEKT 265 (304)
T ss_dssp EEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCCEEEE
T ss_pred cceeeCCCCCCEEEEEECCCC-CEEEEEcCCCeEEEEECCCCceeee
Confidence 999999999999999999999 7999999999999999999887653
No 19
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=321.95 Aligned_cols=297 Identities=15% Similarity=0.192 Sum_probs=230.5
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccC--CCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISS--GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~--~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
+...|.+++|++|| .+|++++ |+++++||....... ..............|...|.+++|++ + +.|+
T Consensus 29 ~~~~v~~~~fs~dG--------~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d-~~l~ 97 (344)
T 4gqb_B 29 MERQLEAARYRSDG--------ALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVG-E-RGIL 97 (344)
T ss_dssp CCSEEEEEEECTTS--------CEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEET-T-TEEE
T ss_pred ccCCEEEEEECCCC--------CEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeC-C-CeEE
Confidence 56779999999998 6888777 777777773210000 00101122333445678899999998 4 5788
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
+|+.||+|+|||+.+++.... +.....+|.+.|++++|++++ .+|++|+.|++|++||+++++.+..+. +|...|
T Consensus 98 ~~s~dg~v~lWd~~~~~~~~~---~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~~~~~~~-~h~~~V 172 (344)
T 4gqb_B 98 VASDSGAVELWELDENETLIV---SKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQVVLSSYR-AHAAQV 172 (344)
T ss_dssp EEETTSEEEEEEECTTSSCEE---EEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCE
T ss_pred EEECCCEEEEEeccCCCceeE---eeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEc-CcCCce
Confidence 999999999999998876544 222234688899999999997 699999999999999999999999998 899999
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEee--CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~--~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
.+++|++++..+|++++.|+ +|++||+++. +.+..+. .|...+.+++|+++++++|++|+.||.|+|||+++++
T Consensus 173 ~~~~~~~~~~~~l~s~s~D~---~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~ 248 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSEDN---RILLWDTRCP-KPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS 248 (344)
T ss_dssp EEEEECSSCTTEEEEEETTS---CEEEEETTSS-SCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--
T ss_pred EEEEecCCCCCceeeecccc---cccccccccc-ceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc
Confidence 99999999988999999998 9999999876 4555553 4556799999999777899999999999999999999
Q ss_pred EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCC--ceeeeeCCcEE
Q 046451 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPA--GASFGFGGKLV 376 (719)
Q Consensus 299 ~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~--~~s~s~~Gklv 376 (719)
++.++.+|...|++++|+|++..+|++|+.|++|+|||+.++++.....|. ..+....|..... .++.|.||+++
T Consensus 249 ~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~---~~V~~v~~sp~~~~llas~s~D~~v~ 325 (344)
T 4gqb_B 249 CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHR---DFVRDATWSPLNHSLLTTVGWDHQVV 325 (344)
T ss_dssp CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCS---SCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCC---CCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence 999999999999999999998779999999999999999999876533322 2234455654332 23556667766
Q ss_pred EEccCC
Q 046451 377 SFHPKS 382 (719)
Q Consensus 377 ~~~~~~ 382 (719)
.|....
T Consensus 326 ~w~v~~ 331 (344)
T 4gqb_B 326 HHVVPT 331 (344)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 666443
No 20
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.1e-36 Score=327.12 Aligned_cols=284 Identities=18% Similarity=0.277 Sum_probs=240.3
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
.+|...|++++|++++ .+|++|+.||.|+|||+ .++ .....+.+|.+.|.+++|++ ++++|+
T Consensus 105 ~gh~~~V~~~~~~p~~--------~~l~s~s~Dg~i~vwd~------~~~---~~~~~l~~h~~~V~~v~~~~-~~~~l~ 166 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVF--------SVMVSASEDATIKVWDY------ETG---DFERTLKGHTDSVQDISFDH-SGKLLA 166 (410)
T ss_dssp ECCSSCEEEEEECSSS--------SEEEEEESSSCEEEEET------TTC---CCCEEECCCSSCEEEEEECT-TSSEEE
T ss_pred cccCCcEEEEEEcCCC--------CEEEEEeCCCeEEEEEC------CCC---cEEEEEeccCCcEEEEEEcC-CCCEEE
Confidence 4689999999999998 79999999999999999 555 77888999999999999999 789999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
+|+.|++|+|||+.+.+.... ..+|...|.+++|++++ .+|++++.|++|++||+++++++..+. .|...|
T Consensus 167 sgs~D~~i~iwd~~~~~~~~~-------~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~~~~~~~-~h~~~v 237 (410)
T 1vyh_C 167 SCSADMTIKLWDFQGFECIRT-------MHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFT-GHREWV 237 (410)
T ss_dssp EEETTSCCCEEETTSSCEEEC-------CCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCE
T ss_pred EEeCCCeEEEEeCCCCceeEE-------EcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEEe-CCCccE
Confidence 999999999999987765433 24578899999999997 599999999999999999999999988 899999
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCC-------------------CCeEE
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPND-------------------SSYLL 281 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d-------------------~~~l~ 281 (719)
.++.|++++ .+|++++.|+ +|++||+++. .....+.+|...|.+++|+++. +.+|+
T Consensus 238 ~~~~~~~~g-~~l~s~s~D~---~v~vwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 312 (410)
T 1vyh_C 238 RMVRPNQDG-TLIASCSNDQ---TVRVWVVATK-ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLL 312 (410)
T ss_dssp EEEEECTTS-SEEEEEETTS---CEEEEETTTC-CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEE
T ss_pred EEEEECCCC-CEEEEEcCCC---eEEEEECCCC-ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEE
Confidence 999999998 5899999998 9999999875 6678889999999999999831 56899
Q ss_pred EEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCccee
Q 046451 282 TCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWY 361 (719)
Q Consensus 282 sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~ 361 (719)
+|+.|+.|+|||+++++++..+.+|...|.+++|++++ .+|++++.||.|+|||+.+++........ ...+....|.
T Consensus 313 sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s~D~~i~vwd~~~~~~~~~~~~h--~~~v~~l~~~ 389 (410)
T 1vyh_C 313 SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKTLRVWDYKNKRCMKTLNAH--EHFVTSLDFH 389 (410)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS-SCEEEEETTTEEEEECCTTSCCCEEEECC--SSCEEEEEEC
T ss_pred EEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCceEEEEcCC--CCcEEEEEEc
Confidence 99999999999999999999999999999999999999 79999999999999999988765422111 1112333344
Q ss_pred cCC-CceeeeeCCcEEEEc
Q 046451 362 KRP-AGASFGFGGKLVSFH 379 (719)
Q Consensus 362 ~~~-~~~s~s~~Gklv~~~ 379 (719)
... ..++.+.||.+..|.
T Consensus 390 ~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 390 KTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp SSSSCEEEEETTSEEEEEC
T ss_pred CCCCEEEEEeCCCcEEEEe
Confidence 332 234455555555554
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.3e-35 Score=338.48 Aligned_cols=351 Identities=18% Similarity=0.307 Sum_probs=276.3
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
|.+.|++|+|||||++||+|+.||.| +|||.+ ++. +....+|...|++++|++++ +
T Consensus 15 H~~~V~~~a~spdg~~las~~~d~~v----------~iWd~~-~~~-----~~~l~gh~~~V~~l~fspdg--------~ 70 (577)
T 2ymu_A 15 HSSSVRGVAFSPDGQTIASASDDKTV----------KLWNRN-GQL-----LQTLTGHSSSVWGVAFSPDG--------Q 70 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEE----------EEECTT-SCE-----EEEEECCSSCEEEEEECTTS--------S
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCEE----------EEEECC-CCE-----EEEEeCCCCCEEEEEECCCC--------C
Confidence 67889999999999999999888876 778743 221 12235689999999999998 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCcc---
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF--- 162 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~--- 162 (719)
+|++++.|+.|+|||+. + +.+..+.+|.+.|.+++|++ ++++|++++.|+.+++|+..........
T Consensus 71 ~las~~~d~~i~vWd~~-------~---~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~ 139 (577)
T 2ymu_A 71 TIASASDDKTVKLWNRN-------G---QLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNRNGQLLQTLTGHS 139 (577)
T ss_dssp EEEEEETTSCEEEEETT-------S---CEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCCEEEEECCCS
T ss_pred EEEEEeCCCEEEEEECC-------C---CEEEEEECCCCCEEEEEECC-CCCEEEEEcCCCceeecccccceeeeccCCC
Confidence 99999999999999962 3 67888999999999999999 8899999999999999997543210000
Q ss_pred ------------------------------CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEe
Q 046451 163 ------------------------------PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF 212 (719)
Q Consensus 163 ------------------------------~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~ 212 (719)
.........+...|.++.|++++ .+|++++.||.|++||. +++.+..+
T Consensus 140 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~~w~~-~~~~~~~~ 217 (577)
T 2ymu_A 140 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNR-NGQLLQTL 217 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEECT-TSCEEEEE
T ss_pred CceeeeeeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCC-CEEEEEcCCCEEEEEeC-CCcEEEEE
Confidence 00000112356688999999997 58999999999999996 46677777
Q ss_pred cCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEE
Q 046451 213 SESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292 (719)
Q Consensus 213 ~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iw 292 (719)
. .|...|.+++|++++. +|++++.|+ .|++||.. .+.+..+.+|...|.+++|++ ++.+|++++.|+.|++|
T Consensus 218 ~-~~~~~v~~~~~s~dg~-~l~~~~~d~---~i~~w~~~--~~~~~~~~~~~~~v~~v~~~~-d~~~l~~~~~d~~i~~w 289 (577)
T 2ymu_A 218 T-GHSSSVRGVAFSPDGQ-TIASASDDK---TVKLWNRN--GQLLQTLTGHSSSVNGVAFRP-DGQTIASASDDKTVKLW 289 (577)
T ss_dssp E-CCSSCEEEEEECTTSS-CEEEEETTS---CEEEECTT--SCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred e-cCCCCEEEEEECCCCC-EEEEEeCCC---EEEEEeCC--CCEEEEEecCCCCEEEEEEcC-CCCEEEEEeCCCEEEEE
Confidence 7 7899999999999984 688888888 89999964 366788999999999999999 99999999999999999
Q ss_pred ECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCc-eeeee
Q 046451 293 DTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAG-ASFGF 371 (719)
Q Consensus 293 d~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~-~s~s~ 371 (719)
|. +++.+..+.+|...|++++|++++ .+|++++.|+.|++||+.+........+. ..+....|...... ++.+.
T Consensus 290 ~~-~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~~~d~~i~~w~~~~~~~~~~~~~~---~~v~~~~~s~~g~~l~~~~~ 364 (577)
T 2ymu_A 290 NR-NGQLLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRNGQHLQTLTGHS---SSVWGVAFSPDGQTIASASD 364 (577)
T ss_dssp ET-TSCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSCEEEEECCCS---SCEEEEEECTTSSEEEEEET
T ss_pred eC-CCcEEEEEecCCCCeEEEEECCCC-CEEEEEeCCCeEEEEeCCCCeeEEEeCCC---CCEEEEEECCCCCEEEEEeC
Confidence 97 677888899999999999999999 79999999999999999876654422211 11222333333222 33344
Q ss_pred CCcEEEEccCCCCCccccccccccceeeccCCCCCC
Q 046451 372 GGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGMV 407 (719)
Q Consensus 372 ~Gklv~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~ 407 (719)
||.+..|+.+ +.....+.+|...|.++++++|+..
T Consensus 365 dg~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~dg~~ 399 (577)
T 2ymu_A 365 DKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQT 399 (577)
T ss_dssp TSEEEEEETT-CCEEEEEECCSSCEEEEEECTTSSC
T ss_pred CCEEEEEcCC-CCEEEEecCCCCCeEEEEECCCCCE
Confidence 5555555533 3455667889999999999999876
No 22
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.3e-35 Score=336.40 Aligned_cols=343 Identities=19% Similarity=0.320 Sum_probs=280.2
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
+...|.+++|++||++|++++.||.| ++||.+.. . +.....|...|++++|++++ .
T Consensus 220 ~~~~v~~~~~s~dg~~l~~~~~d~~i----------~~w~~~~~----~--~~~~~~~~~~v~~v~~~~d~--------~ 275 (577)
T 2ymu_A 220 HSSSVRGVAFSPDGQTIASASDDKTV----------KLWNRNGQ----L--LQTLTGHSSSVNGVAFRPDG--------Q 275 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSCE----------EEECTTSC----E--EEEECCCSSCEEEEEECTTS--------S
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCEE----------EEEeCCCC----E--EEEEecCCCCEEEEEEcCCC--------C
Confidence 55789999999999999999988877 67764321 1 12234688999999999998 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|++++.|+.|++||.. + +.+..+.+|...|.+++|++ ++++|++++.|+.|++||+..... .. +
T Consensus 276 ~l~~~~~d~~i~~w~~~-------~---~~~~~~~~h~~~v~~~~~~~-~~~~l~t~~~d~~i~~w~~~~~~~-~~---~ 340 (577)
T 2ymu_A 276 TIASASDDKTVKLWNRN-------G---QLLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNRNGQHL-QT---L 340 (577)
T ss_dssp EEEEEETTSCEEEEETT-------S---CEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTSCEE-EE---E
T ss_pred EEEEEeCCCEEEEEeCC-------C---cEEEEEecCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeCCCCee-EE---E
Confidence 99999999999999963 3 66778899999999999999 889999999999999999865432 11 1
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
..|...|.+++|++++ .+|++++.||.|++||. +++.+..+. .|...|.+++|+++++ +|++++.|+ .|
T Consensus 341 ----~~~~~~v~~~~~s~~g-~~l~~~~~dg~v~~~~~-~~~~~~~~~-~~~~~v~~~~~s~dg~-~l~~~~~d~---~v 409 (577)
T 2ymu_A 341 ----TGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNR-NGQLLQTLT-GHSSSVRGVAFSPDGQ-TIASASDDK---TV 409 (577)
T ss_dssp ----CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEET-TCCEEEEEE-CCSSCEEEEEECTTSS-CEEEEETTS---EE
T ss_pred ----eCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEcC-CCCEEEEec-CCCCCeEEEEECCCCC-EEEEEeCCC---EE
Confidence 3467799999999997 59999999999999995 467777777 7899999999999984 688898888 99
Q ss_pred EEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEE
Q 046451 246 RLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISA 325 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las 325 (719)
++||.. .+.+..+.+|...|++++|+| ++++|++++.|+.|++||. +++.+..+.+|...|++++|++++ .+|++
T Consensus 410 ~~~~~~--~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~-~~las 484 (577)
T 2ymu_A 410 KLWNRN--GQLLQTLTGHSSSVWGVAFSP-DDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDG-QTIAS 484 (577)
T ss_dssp EEECTT--CCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTS-CEEEE
T ss_pred EEEeCC--CCEEEEecCCCCCeEEEEECC-CCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCC-CEEEE
Confidence 999964 366888999999999999999 8999999999999999997 678888999999999999999999 79999
Q ss_pred EeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCC-CceeeeeCCcEEEEccCCCCCccccccccccceeeccCCC
Q 046451 326 SSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRP-AGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKY 404 (719)
Q Consensus 326 ~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~-~~~s~s~~Gklv~~~~~~~~~~~~~~~~~~~v~~v~~s~~ 404 (719)
++.|+.|+|||...........+. ..+....|..+. ..++.+.||.+..|+. ++.....+.+|.+.|.+|++|+|
T Consensus 485 ~~~d~~i~iw~~~~~~~~~~~~h~---~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~d 560 (577)
T 2ymu_A 485 ASDDKTVKLWNRNGQLLQTLTGHS---SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPD 560 (577)
T ss_dssp EETTSEEEEEETTSCEEEEEECCS---SCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTT
T ss_pred EeCCCEEEEEcCCCCEEEEEeCCC---CCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCC
Confidence 999999999997543332211111 223444555543 3455666777777774 34566778999999999999999
Q ss_pred CCC
Q 046451 405 GMV 407 (719)
Q Consensus 405 ~~~ 407 (719)
|..
T Consensus 561 g~~ 563 (577)
T 2ymu_A 561 GQT 563 (577)
T ss_dssp SSC
T ss_pred CCE
Confidence 865
No 23
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3e-35 Score=311.25 Aligned_cols=292 Identities=16% Similarity=0.266 Sum_probs=244.9
Q ss_pred ccCccceEEEcCC-CCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 6 GINRSASVAFAPD-APYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 6 ~~~~V~~vafSpd-g~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
|.+.|++|+|+|+ +++||+|+.||.| +|||+...+...........+|...|.+++|++++
T Consensus 37 H~~~V~~v~~sp~~~~~l~S~s~D~~i----------~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg-------- 98 (340)
T 4aow_A 37 HNGWVTQIATTPQFPDMILSASRDKTI----------IMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG-------- 98 (340)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSCE----------EEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTS--------
T ss_pred ccCCEEEEEEeCCCCCEEEEEcCCCeE----------EEEECCCCCcccceeeEEEeCCCCCEEEEEECCCC--------
Confidence 7789999999998 6899999988877 89999876655444444556789999999999998
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
.+|++++.|+.|++|+. ... ........+...+..+.+++ ++++|++++.|+.+++||+.......
T Consensus 99 ~~l~s~~~d~~i~~~~~------~~~---~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~---- 164 (340)
T 4aow_A 99 QFALSGSWDGTLRLWDL------TTG---TTTRRFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYT---- 164 (340)
T ss_dssp SEEEEEETTSEEEEEET------TTT---EEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEE----
T ss_pred CEEEEEcccccceEEee------ccc---ceeeeecCCCCceeEEEEee-cCccceeecCCCeEEEEEeCCCceEE----
Confidence 79999999999999998 344 56666777888999999998 78999999999999999987654321
Q ss_pred ccCCCCCCCCCeEEEEecCCCC-cEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQ-HILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~-~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~ 243 (719)
.....|...+.+++|++++. .++++++.|+.|++||+++++.+..+. .|...|.+++|++++ .+|++++.|+
T Consensus 165 --~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~-~h~~~v~~~~~s~~~-~~l~s~s~Dg--- 237 (340)
T 4aow_A 165 --VQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI-GHTGYLNTVTVSPDG-SLCASGGKDG--- 237 (340)
T ss_dssp --ECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTS-SEEEEEETTC---
T ss_pred --EEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec-CCCCcEEEEEECCCC-CEEEEEeCCC---
Confidence 22345778999999987653 477899999999999999999998888 799999999999998 5899999998
Q ss_pred cEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec---------CCCCCeEEeE
Q 046451 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP---------AGTNWNFDIH 314 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~---------~h~~~v~~l~ 314 (719)
.|++||+++. +.+..+.. ...|.+++|++ ++ .+++++.|+.|+|||++++..+..+. .|...|++++
T Consensus 238 ~i~iwd~~~~-~~~~~~~~-~~~v~~~~~~~-~~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 313 (340)
T 4aow_A 238 QAMLWDLNEG-KHLYTLDG-GDIINALCFSP-NR-YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLA 313 (340)
T ss_dssp EEEEEETTTT-EEEEEEEC-SSCEEEEEECS-SS-SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEE
T ss_pred eEEEEEeccC-ceeeeecC-CceEEeeecCC-CC-ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEE
Confidence 9999999875 55666664 46899999998 54 56677789999999999888776654 5788999999
Q ss_pred EcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 315 WYPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 315 ~spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
|++++ .+|++|+.||.|+|||+++|+
T Consensus 314 ~s~dg-~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 314 WSADG-QTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ECTTS-SEEEEEETTSCEEEEEEEC--
T ss_pred ECCCC-CEEEEEeCCCEEEEEeCCCcC
Confidence 99999 799999999999999999875
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.3e-36 Score=324.11 Aligned_cols=306 Identities=16% Similarity=0.181 Sum_probs=249.1
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
..+|.+.|++++|++++ .+|++|+.||+|+|||+ .++ .....+..|...|.+++|++ ++++|
T Consensus 62 l~gH~~~V~~~~~sp~~--------~~l~s~s~D~~v~iWd~------~~~---~~~~~~~~h~~~v~~~~~s~-~g~~l 123 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEK--------NWIVSASQDGRLIVWNA------LTS---QKTHAIKLHCPWVMECAFAP-NGQSV 123 (380)
T ss_dssp ECCCSSCEEEEEECTTS--------SCEEEEETTSEEEEEET------TTT---EEEEEEECCCTTCCCCEECT-TSSEE
T ss_pred ccccccEEEEEEEcCCC--------CEEEEEeCCCeEEEEEC------CCC---ccceEEecCCCCEEEEEECC-CCCEE
Confidence 35799999999999998 79999999999999998 455 77888999999999999999 89999
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec----CC
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS----ES 215 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~----~~ 215 (719)
++|+.|+.|+|||+.+...............+|.+.|.++.|++++...|++++.|++|++||+++++.+..+. ..
T Consensus 124 as~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~ 203 (380)
T 3iz6_a 124 ACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSG 203 (380)
T ss_dssp EECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSS
T ss_pred EEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCC
Confidence 99999999999999764322111112233457888999999999876789999999999999999999887762 26
Q ss_pred CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 216 IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 216 ~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
|...|.+++|++....+|++++.|+ +|++||++.....+..+.+|...|.+++|+| ++.+|++|+.||+|+|||++
T Consensus 204 h~~~v~~~~~~~~~~~~l~sgs~D~---~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 204 HTADVLSLSINSLNANMFISGSCDT---TVRLWDLRITSRAVRTYHGHEGDINSVKFFP-DGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp CCSCEEEEEECSSSCCEEEEEETTS---CEEEEETTTTCCCCEEECCCSSCCCEEEECT-TSSEEEEECSSSCEEEEETT
T ss_pred CccCeEEEEeecCCCCEEEEEECCC---eEEEEECCCCCcceEEECCcCCCeEEEEEec-CCCeEEEEcCCCeEEEEECC
Confidence 8889999999885557899999998 9999999876678889999999999999999 99999999999999999999
Q ss_pred CCeEEEEecCCC-------CCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCcee
Q 046451 296 SGEIVSELPAGT-------NWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGAS 368 (719)
Q Consensus 296 ~~~~~~~l~~h~-------~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s 368 (719)
+++.+..+..+. ..|++++|+++| .+|++|+.||.|+|||+.+++.......... . .......++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~-~------h~~~v~~l~ 351 (380)
T 3iz6_a 280 TGHQLQVYNREPDRNDNELPIVTSVAFSISG-RLLFAGYSNGDCYVWDTLLAEMVLNLGTLQN-S------HEGRISCLG 351 (380)
T ss_dssp TTEEEEEECCCCSSSCCSSCSCSEEEECSSS-SEEEEECTTSCEEEEETTTCCEEEEECCSCS-S------CCCCCCEEE
T ss_pred CCcEEEEecccccccccccCceEEEEECCCC-CEEEEEECCCCEEEEECCCCceEEEEecccC-C------CCCceEEEE
Confidence 999988876543 248999999999 7999999999999999988776542211100 0 111234577
Q ss_pred eeeCCcEEEEccCCC-CCcccccccccc
Q 046451 369 FGFGGKLVSFHPKSS-AGHTSENSQHAP 395 (719)
Q Consensus 369 ~s~~Gklv~~~~~~~-~~~~~~~~~~~~ 395 (719)
|++||++++-+..++ -..|.+.+|+..
T Consensus 352 ~s~dg~~l~sgs~D~~i~iW~~~~~~~i 379 (380)
T 3iz6_a 352 LSSDGSALCTGSWDKNLKIWAFSGHRKI 379 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEECCSSSSC
T ss_pred ECCCCCEEEEeeCCCCEEEEecCCCccc
Confidence 888888766555444 345777777644
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.8e-36 Score=322.46 Aligned_cols=327 Identities=12% Similarity=0.181 Sum_probs=233.9
Q ss_pred cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 10 SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 10 V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
-..+.+..++.|+...+ +.....|++.... ...|...|++++|+||| .+|++
T Consensus 8 ~sg~d~g~~~~~~~~~g-----------~~~~~~w~~p~~~---------p~~H~~~V~~v~fSpDG--------~~las 59 (357)
T 4g56_B 8 SSGVDLGTENLYFQSNG-----------SSKGSAWGRPVTA---------PACMEVQIGAVRYRRDG--------ALLLA 59 (357)
T ss_dssp ----------------------------------------------------CCCSEEEEEEECSSS--------CEEEE
T ss_pred ccCCCCCccceEEecCC-----------CccccccCCCCCC---------cccccCCEEEEEECCCC--------CEEEE
Confidence 34455555555554432 2334678775321 13488999999999999 79999
Q ss_pred EcC------CCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 90 GLV------DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 90 gs~------dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
|+. |+.|++|+..+... ..........|...|.+++|++ ++ .+++++.||+|+|||+.+++....
T Consensus 60 ~s~d~~~~wd~~v~~~~~~~~~~-----~~~~~~~~~~~~~~V~~~~~s~-d~-~~l~~s~dg~v~lWd~~~~~~~~~-- 130 (357)
T 4g56_B 60 ASSLSSRTWGGSIWVFKDPEGAP-----NESLCTAGVQTEAGVTDVAWVS-EK-GILVASDSGAVELWEILEKESLLV-- 130 (357)
T ss_dssp EECSSSSSCCEEEEEESSCC--------CGGGCSEEEECSSCEEEEEEET-TT-EEEEEETTSCEEEC--------CC--
T ss_pred EcCCCCccccCeEEEEECCCCCc-----ceeEecccCCCCCCEEEEEEcC-CC-CEEEEECCCEEEEeeccccceeEE--
Confidence 987 77899999743211 1133445567899999999999 54 566788999999999998765433
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~ 243 (719)
......+|...|++++|++++ .+|++++.||+|++||+++++.+..+. .|...|.+++|++++..++++++.|+
T Consensus 131 -~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~~~~~~~-~h~~~v~~v~~s~~~~~~~~s~~~dg--- 204 (357)
T 4g56_B 131 -NKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKAVLKSYN-AHSSEVNCVAACPGKDTIFLSCGEDG--- 204 (357)
T ss_dssp -CCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTCSSCEEEEETTS---
T ss_pred -EeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEc-CCCCCEEEEEEccCCCceeeeeccCC---
Confidence 222234688899999999997 699999999999999999999999998 89999999999999888899999998
Q ss_pred cEEEEecCCCCCceEE--eeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCC
Q 046451 244 ALRLWDMRNTMSPVKE--FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPG 321 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~--~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~ 321 (719)
.|++||+++.. .+.. +..|...+.+++|+|+++.+|++|+.|+.|+|||+++++.+..+.+|...|++++|++++..
T Consensus 205 ~v~~wd~~~~~-~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~ 283 (357)
T 4g56_B 205 RILLWDTRKPK-PATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSP 283 (357)
T ss_dssp CEEECCTTSSS-CBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSC
T ss_pred ceEEEECCCCc-eeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCC
Confidence 89999998763 3333 34567789999999966778999999999999999999999999999999999999999878
Q ss_pred EEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceec-C-CCceeeeeCCcEEEEccCCC
Q 046451 322 VISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYK-R-PAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 322 ~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~-~-~~~~s~s~~Gklv~~~~~~~ 383 (719)
+|++++.|++|+|||+++++++....+. ..+....|.+ . ...++.+.||++..|.....
T Consensus 284 ~lasgs~D~~i~iwd~~~~~~~~~~~H~---~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 284 FLASISEDCTVAVLDADFSEVFRDLSHR---DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp CEEEEETTSCEEEECTTSCEEEEECCCS---SCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEEEEeCCCEEEEEECCCCcEeEECCCC---CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 9999999999999999999887644332 2345566764 2 24567788888888876544
No 26
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.4e-36 Score=316.29 Aligned_cols=258 Identities=18% Similarity=0.318 Sum_probs=223.5
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
...|.+.|++++|++++.. ...+|++|+.|+.|+|||+... .. .....+.+|...|.+++|++ ++.++
T Consensus 28 ~~~H~~~V~~v~~~~~~~~----~~~~l~tgs~D~~v~vW~~~~~----~~---~~~~~l~gh~~~v~~~~~~~-~~~~l 95 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKE----NSETVVTGSLDDLVKVWKWRDE----RL---DLQWSLEGHQLGVVSVDISH-TLPIA 95 (321)
T ss_dssp TTSSSSCEEEEEEC-----------CEEEEEETTSCEEEEEEETT----EE---EEEEEECCCSSCEEEEEECS-SSSEE
T ss_pred cccCCCcEEEEEEecCCCC----CCCEEEEEcCCCCEEEEECCCC----Ce---eeeeeeccCCCCEEEEEECC-CCCEE
Confidence 4579999999999986421 0168999999999999998421 11 34557889999999999999 78999
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR 219 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~ 219 (719)
++++.|++|++||+.+++....+ ..+...+.+++|++++ .+|++++.||.|++||+++++....+. .+...
T Consensus 96 ~s~s~D~~i~lWd~~~~~~~~~~-------~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~~~~~~~-~~~~~ 166 (321)
T 3ow8_A 96 ASSSLDAHIRLWDLENGKQIKSI-------DAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSLD-TRGKF 166 (321)
T ss_dssp EEEETTSEEEEEETTTTEEEEEE-------ECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCSEEEEEE-CSSSC
T ss_pred EEEeCCCcEEEEECCCCCEEEEE-------eCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCceeEEec-CCCce
Confidence 99999999999999987765442 2355678899999997 599999999999999999999888887 68889
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI 299 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~ 299 (719)
|.+++|++++ .+|++++.|+ .|++||+++. +.+..+.+|...|.+++|+| ++.+|++++.|+.|+|||+++++.
T Consensus 167 v~~~~~spdg-~~lasg~~dg---~i~iwd~~~~-~~~~~~~~h~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~ 240 (321)
T 3ow8_A 167 ILSIAYSPDG-KYLASGAIDG---IINIFDIATG-KLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANL 240 (321)
T ss_dssp EEEEEECTTS-SEEEEEETTS---CEEEEETTTT-EEEEEECCCSSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCE
T ss_pred EEEEEECCCC-CEEEEEcCCC---eEEEEECCCC-cEEEEEcccCCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcce
Confidence 9999999998 5799999998 8999999875 67788999999999999999 999999999999999999999999
Q ss_pred EEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccccc
Q 046451 300 VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345 (719)
Q Consensus 300 ~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~ 345 (719)
+..+.+|...|.+++|++++ .+|++++.|++|+|||+.+++.+..
T Consensus 241 ~~~~~~h~~~v~~~~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~~~ 285 (321)
T 3ow8_A 241 AGTLSGHASWVLNVAFCPDD-THFVSSSSDKSVKVWDVGTRTCVHT 285 (321)
T ss_dssp EEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEE
T ss_pred eEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCEEEEE
Confidence 99999999999999999999 7999999999999999999887653
No 27
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=7.8e-35 Score=307.13 Aligned_cols=289 Identities=15% Similarity=0.218 Sum_probs=248.2
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
+.|.+.|.+++|++++++|++++ ||.| ++||+........+.......|...|.+++|++++
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i----------~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------- 109 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCV----------KVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG------- 109 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEE----------EEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTS-------
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeE----------EEEECCCCCceeeeecccccCCCCcEEEEEEcCCC-------
Confidence 45778899999999999999997 7766 89999876655555444445789999999999998
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
++|++++.||.|++||+.. + .......+..|...|.+++|++ ++++|++++.||.|++||+.+.+....+
T Consensus 110 -~~l~~~~~d~~i~~~d~~~------~-~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~- 179 (337)
T 1gxr_A 110 -CTLIVGGEASTLSIWDLAA------P-TPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQF- 179 (337)
T ss_dssp -SEEEEEESSSEEEEEECCC------C---EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEE-
T ss_pred -CEEEEEcCCCcEEEEECCC------C-CcceeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeee-
Confidence 7999999999999999843 2 0135677888999999999999 8899999999999999999987654432
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~ 243 (719)
..|...|.+++|++++ .+|++++.||.|++||+++++.+..+. +...+.+++|++++ .++++++.++
T Consensus 180 ------~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~--~~~~v~~~~~s~~~-~~l~~~~~~~--- 246 (337)
T 1gxr_A 180 ------QGHTDGASCIDISNDG-TKLWTGGLDNTVRSWDLREGRQLQQHD--FTSQIFSLGYCPTG-EWLAVGMESS--- 246 (337)
T ss_dssp ------CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEECTTS-SEEEEEETTS---
T ss_pred ------ecccCceEEEEECCCC-CEEEEEecCCcEEEEECCCCceEeeec--CCCceEEEEECCCC-CEEEEEcCCC---
Confidence 3467799999999997 699999999999999999999888876 78889999999998 5788888887
Q ss_pred cEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEE
Q 046451 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVI 323 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~l 323 (719)
.|++||+++.. ...+..|...|.+++|++ ++++|++++.||.|++||+.+++.+..+ .|...|.+++|++++ .+|
T Consensus 247 ~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~-~~l 321 (337)
T 1gxr_A 247 NVEVLHVNKPD--KYQLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDD-KYI 321 (337)
T ss_dssp CEEEEETTSSC--EEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTS-CEE
T ss_pred cEEEEECCCCC--eEEEcCCccceeEEEECC-CCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCC-CEE
Confidence 89999998753 456788999999999999 8999999999999999999999888654 577789999999999 799
Q ss_pred EEEeCCCcEEEEeCC
Q 046451 324 SASSFDGKIGIYNIE 338 (719)
Q Consensus 324 as~s~Dg~I~iwd~~ 338 (719)
++++.||.|++|++.
T Consensus 322 ~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 322 VTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEETTSCEEEEEEE
T ss_pred EEecCCCeEEEEEEe
Confidence 999999999999973
No 28
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-35 Score=322.32 Aligned_cols=297 Identities=18% Similarity=0.332 Sum_probs=243.2
Q ss_pred cccCccceEEEcCCCC-eEEEeeccceeecccCCCceEEEEEe----eccCC------cccceeec-----ccCCCCCce
Q 046451 5 KGINRSASVAFAPDAP-YMAAGTMAGAVDLSFSSSANLEIFKL----DFQSE------DRDLLLVG-----ESPSSERFN 68 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~-~Latgs~dG~v~v~~s~~~~i~iwd~----~~~~~------~~~~~~~~-----~~~~~~~V~ 68 (719)
.+.+.|.+++|+|||+ +||+|+.||.| ++|++ ..+.. ...+.... ...|...|+
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i----------~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVA----------RLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVT 112 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEE----------EEEEEEEC------CEEEEEEEEEECCCCCC------CBCEE
T ss_pred eccCceEEEEECCCCCcEEEEecCCceE----------EEEEEecccCCccccccccccccccccccccccccCCCCceE
Confidence 3457899999999999 99999988877 77777 54431 11111000 012577999
Q ss_pred eeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcE
Q 046451 69 RLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEI 148 (719)
Q Consensus 69 ~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I 148 (719)
+++|++++ .+|++++.||.|++||. ++ ..+..+..|...|.+++|++ ++++|++++.||.|
T Consensus 113 ~~~~s~~~--------~~l~~~~~dg~i~i~~~-------~~---~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i 173 (425)
T 1r5m_A 113 CLAWSHDG--------NSIVTGVENGELRLWNK-------TG---ALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVT 173 (425)
T ss_dssp EEEECTTS--------SEEEEEETTSCEEEEET-------TS---CEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCE
T ss_pred EEEEcCCC--------CEEEEEeCCCeEEEEeC-------CC---CeeeeccCCCccEEEEEECC-CCCEEEEEecCCeE
Confidence 99999998 79999999999999994 23 67788889999999999999 88999999999999
Q ss_pred EEEcCCCCCCCCccCCccCC--------CCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 149 CIWDLSAPAEPSHFPPLRGN--------GSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 149 ~iwdl~~~~~~~~~~~l~~~--------~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
++||+.+++....+...... .......+.+++|++++ .+++++.||.|++||+++++.+..+. .|...|
T Consensus 174 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~~~~~~~-~~~~~i 250 (425)
T 1r5m_A 174 ILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKTPTGKLI-GHHGPI 250 (425)
T ss_dssp EEEETTTTEEEEEECCC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSSCSEEEC-CCSSCE
T ss_pred EEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCceeeeec-cCCCce
Confidence 99999887655443111000 00011128899999884 68999999999999999999888887 789999
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEE
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV 300 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~ 300 (719)
.+++|++++. +|++++.++ .|++||+++. +.+..+.+|...|.+++|++ ++ +|++++.|+.|++||+++++.+
T Consensus 251 ~~~~~~~~~~-~l~~~~~d~---~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~d~~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 251 SVLEFNDTNK-LLLSASDDG---TLRIWHGGNG-NSQNCFYGHSQSIVSASWVG-DD-KVISCSMDGSVRLWSLKQNTLL 323 (425)
T ss_dssp EEEEEETTTT-EEEEEETTS---CEEEECSSSB-SCSEEECCCSSCEEEEEEET-TT-EEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEECCCCC-EEEEEcCCC---EEEEEECCCC-ccceEecCCCccEEEEEECC-CC-EEEEEeCCCcEEEEECCCCcEe
Confidence 9999999984 788898888 8999999875 66788888999999999999 77 9999999999999999999999
Q ss_pred EEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 301 SELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 301 ~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
..+..|...|.+++|++++ .+|++++.||.|+|||+.+++
T Consensus 324 ~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 324 ALSIVDGVPIFAGRISQDG-QKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEEECTTCCEEEEEECTTS-SEEEEEETTSCEEEEECHHHH
T ss_pred EecccCCccEEEEEEcCCC-CEEEEEECCCeEEEEECCCCc
Confidence 9999999999999999999 799999999999999999876
No 29
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.6e-35 Score=316.61 Aligned_cols=301 Identities=15% Similarity=0.192 Sum_probs=246.0
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccce-eecccCCCCCceeeeecCC----CCCC
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLL-LVGESPSSERFNRLAWGKN----GSGS 79 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~-~~~~~~~~~~V~~l~~sp~----g~~~ 79 (719)
.|.+.|++++|++ ++||+|+.||.| +|||+........+. +.....|...|++++|+++ +..
T Consensus 14 ~h~~~i~~~~~~~--~~l~s~~~dg~i----------~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~- 80 (397)
T 1sq9_A 14 AHDADIFSVSACN--SFTVSCSGDGYL----------KVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFE- 80 (397)
T ss_dssp CSSSCEEEEEECS--SEEEEEETTSEE----------EEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEE-
T ss_pred hhhcCeEEEEecC--CeEEEEcCCCEE----------EEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCcc-
Confidence 4678999999999 899999988876 889998765222221 2333468999999999998 400
Q ss_pred CCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCc-----eeeeccc-----cCCEEEEEEe----CCCCCE-EEEEeC
Q 046451 80 EDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPL-----IAHLSRH-----KGPVRGLEFN----SFTPNL-LASGAD 144 (719)
Q Consensus 80 ~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~-----~~~l~~h-----~~~V~~l~fs----p~~~~~-lasgs~ 144 (719)
..+|++++.||.|++||+. ++ .. +..+..| ...|.+++|+ + ++++ |++++.
T Consensus 81 ----~~~l~s~~~dg~i~iw~~~------~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~ 146 (397)
T 1sq9_A 81 ----LCLVATTSFSGDLLFYRIT------RE---DETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDV 146 (397)
T ss_dssp ----EEEEEEEETTSCEEEEEEE------EC---TTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEET
T ss_pred ----ccEEEEEcCCCCEEEEEcc------CC---cccccccceeecccccccCCCcEEEEEEeeccCC-CCceEEEEEeC
Confidence 0389999999999999984 33 33 7778888 5999999999 8 7888 999999
Q ss_pred CCcEEEEcCCC------CCCCC-----ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec
Q 046451 145 DGEICIWDLSA------PAEPS-----HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS 213 (719)
Q Consensus 145 dg~I~iwdl~~------~~~~~-----~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~ 213 (719)
||.|++||+.+ .+... .+.........|...|.+++|++++ +|++++.||.|++||+++++.+..+.
T Consensus 147 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~ 224 (397)
T 1sq9_A 147 KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFE 224 (397)
T ss_dssp TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEe
Confidence 99999999988 55543 2100000013467789999999996 89999999999999999999998888
Q ss_pred CC---C---CCceeEEEECCCCCcEEEEEeCC---CCCCcEEEEecCCCCCceEEeeC-------------CCCCeeEEE
Q 046451 214 ES---I---KRRCSVLQWNPDVATQLVVASDE---DSSPALRLWDMRNTMSPVKEFVG-------------HTKGVIAMS 271 (719)
Q Consensus 214 ~~---~---~~~i~~l~~sp~g~~~l~~~s~d---~~~~~I~lwDl~~~~~~~~~~~~-------------h~~~V~~v~ 271 (719)
. | ...|.+++|++++ .+|++++.+ + .|++||+++. +.+..+.+ |...|.+++
T Consensus 225 -~~~~h~~~~~~i~~i~~~~~~-~~l~~~~~d~~~g---~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 298 (397)
T 1sq9_A 225 -SQHSMINNSNSIRSVKFSPQG-SLLAIAHDSNSFG---CITLYETEFG-ERIGSLSVPTHSSQASLGEFAHSSWVMSLS 298 (397)
T ss_dssp -CCC---CCCCCEEEEEECSST-TEEEEEEEETTEE---EEEEEETTTC-CEEEEECBC--------CCBSBSSCEEEEE
T ss_pred -ccccccccCCccceEEECCCC-CEEEEEecCCCCc---eEEEEECCCC-cccceeccCcccccccccccccCCcEEEEE
Confidence 5 6 8999999999998 578888888 6 8999999875 67788888 999999999
Q ss_pred eCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec------CC---------------CCCeEEeEEcCCCC---------C
Q 046451 272 WCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP------AG---------------TNWNFDIHWYPKIP---------G 321 (719)
Q Consensus 272 ~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~------~h---------------~~~v~~l~~spdg~---------~ 321 (719)
|++ ++++|++++.||.|+|||+.+++.+..+. .| ...|++++|++++. .
T Consensus 299 ~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~ 377 (397)
T 1sq9_A 299 FND-SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNE 377 (397)
T ss_dssp ECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSC
T ss_pred ECC-CCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccc
Confidence 999 89999999999999999999999999999 78 88999999999973 5
Q ss_pred EEEEEeCCCcEEEEeCCCCc
Q 046451 322 VISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 322 ~las~s~Dg~I~iwd~~~~~ 341 (719)
+|++++.||.|+|||+.+++
T Consensus 378 ~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 378 SLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp EEEEEETTTEEEEEEEEC--
T ss_pred eEEEecCCCcEEEEEcCCCC
Confidence 99999999999999998764
No 30
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=8.2e-35 Score=340.16 Aligned_cols=293 Identities=16% Similarity=0.292 Sum_probs=241.9
Q ss_pred cccCccceEEEcCCC-CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 5 KGINRSASVAFAPDA-PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 5 ~~~~~V~~vafSpdg-~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
.|.+.|++|+|++++ ++|++|+.||.| +||++...............+|...|++++|++++
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i----------~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g------- 442 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSI----------ILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDG------- 442 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEE----------EEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTS-------
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcE----------EEEEccCCCcccccccceecCCCCcEEEEEECCCC-------
Confidence 477899999999975 799999988877 88998765433222233446799999999999998
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
++|++|+.||.|+|||+ .++ ..+..+.+|.+.|.+++|++ ++++|++|+.|++|+|||+.......
T Consensus 443 -~~l~sgs~Dg~v~vwd~------~~~---~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~--- 508 (694)
T 3dm0_A 443 -QFALSGSWDGELRLWDL------AAG---VSTRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYT--- 508 (694)
T ss_dssp -SEEEEEETTSEEEEEET------TTT---EEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEE---
T ss_pred -CEEEEEeCCCcEEEEEC------CCC---cceeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCccee---
Confidence 79999999999999999 455 77888999999999999999 78999999999999999986543211
Q ss_pred CccCCCCCCCCCeEEEEecCCCC-cEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQ-HILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSS 242 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~-~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~ 242 (719)
+......|...|.+++|++++. .+|++++.|++|++||+++++....+. .|...|.+++|++++ .+|++++.|+
T Consensus 509 -~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg-~~l~sg~~Dg-- 583 (694)
T 3dm0_A 509 -ISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA-GHTGYVSTVAVSPDG-SLCASGGKDG-- 583 (694)
T ss_dssp -ECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTS-SEEEEEETTS--
T ss_pred -eccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc-CCCCCEEEEEEeCCC-CEEEEEeCCC--
Confidence 2223346888999999999863 589999999999999999999888888 899999999999998 5899999998
Q ss_pred CcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC---------------
Q 046451 243 PALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT--------------- 307 (719)
Q Consensus 243 ~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~--------------- 307 (719)
+|+|||+++. +.+..+. +...|.+++|++ ++.+|+++ .|+.|+|||+++++.+..+..+.
T Consensus 584 -~i~iwd~~~~-~~~~~~~-~~~~v~~~~~sp-~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (694)
T 3dm0_A 584 -VVLLWDLAEG-KKLYSLE-ANSVIHALCFSP-NRYWLCAA-TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAAT 658 (694)
T ss_dssp -BCEEEETTTT-EEEECCB-CSSCEEEEEECS-SSSEEEEE-ETTEEEEEETTTTEEEEEECCCCC--------------
T ss_pred -eEEEEECCCC-ceEEEec-CCCcEEEEEEcC-CCcEEEEE-cCCCEEEEECCCCCChhhhccccccccccccccccccC
Confidence 9999999875 4455554 446899999999 77766665 46679999999999888775432
Q ss_pred ----CCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 308 ----NWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 308 ----~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
..+++++|+++| .+|++|+.||+|+||++..
T Consensus 659 ~~~~~~~~~l~~spdg-~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 659 KRKVIYCTSLNWSADG-STLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp --CCCCEEEEEECTTS-SEEEEEETTSEEEEEEC--
T ss_pred CceeEEeeeEEEcCCC-CEEEEEcCCCeEEEEeccC
Confidence 237899999999 7999999999999999863
No 31
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.9e-35 Score=310.01 Aligned_cols=299 Identities=17% Similarity=0.312 Sum_probs=234.0
Q ss_pred ccCccceEEEcCCCCe-EEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 6 GINRSASVAFAPDAPY-MAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~-Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
|.+.|.+++|+|+++. |++|+.+ ..++.|+|||+..+... ......|...|++++|++++.+.
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~-------~~d~~v~iw~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~----- 80 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFA-------RGTGVIQLYEIQHGDLK----LLREIEKAKPIKCGTFGATSLQQ----- 80 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC---------CCCEEEEEEEECSSSEE----EEEEEEESSCEEEEECTTCCTTT-----
T ss_pred CCCceEEEEEcCCCceEEEecCcc-------CCCcEEEEEeCCCCccc----ceeeecccCcEEEEEEcCCCCCC-----
Confidence 6679999999999965 4566541 01334489999855422 22234688999999999983111
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCC-ceeeeccccCCEEEEEE------eCCCCCEEEEEeCCCcEEEEcCCCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNP-LIAHLSRHKGPVRGLEF------NSFTPNLLASGADDGEICIWDLSAPA 157 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~-~~~~l~~h~~~V~~l~f------sp~~~~~lasgs~dg~I~iwdl~~~~ 157 (719)
.+|++|+.||.|++||+. ++ . .+..+.+|...|.+++| ++ ++++|++++.||.|++||+.+.+
T Consensus 81 ~~l~~~~~dg~i~iwd~~------~~---~~~~~~~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 81 RYLATGDFGGNLHIWNLE------AP---EMPVYSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp CCEEEEETTSCEEEECTT------SC---SSCSEEECCCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCS
T ss_pred ceEEEecCCCeEEEEeCC------CC---CccEEEEEecccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCC
Confidence 699999999999999994 33 3 67888899999999965 56 78899999999999999999876
Q ss_pred -CCCccCCccCCCCCCCCCeEEEE----ecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECC---CC
Q 046451 158 -EPSHFPPLRGNGSAAQGEISFVS----WNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNP---DV 229 (719)
Q Consensus 158 -~~~~~~~l~~~~~~h~~~I~~l~----~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp---~g 229 (719)
.... +......+...|.+++ |++++ .+|++++.||.|++||+++++...... +...|.+++|++ ++
T Consensus 151 ~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~~ 224 (357)
T 3i2n_A 151 DPVAN---MEPVQGENKRDCWTVAFGNAYNQEE-RVVCAGYDNGDIKLFDLRNMALRWETN--IKNGVCSLEFDRKDISM 224 (357)
T ss_dssp SCSEE---ECCCTTSCCCCEEEEEEECCCC-CC-CEEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEESCSSSSC
T ss_pred Cccee---ccccCCCCCCceEEEEEEeccCCCC-CEEEEEccCCeEEEEECccCceeeecC--CCCceEEEEcCCCCCCC
Confidence 3333 2222222345899998 67776 699999999999999999998866654 888999999999 76
Q ss_pred CcEEEEEeCCCCCCcEEEEecCCCCCceEEe-----eCCCCCeeEEEeCCCCCC-eEEEEeCCCcEEEEECCCC------
Q 046451 230 ATQLVVASDEDSSPALRLWDMRNTMSPVKEF-----VGHTKGVIAMSWCPNDSS-YLLTCAKDNRTICWDTVSG------ 297 (719)
Q Consensus 230 ~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~-----~~h~~~V~~v~~sp~d~~-~l~sgs~Dg~I~iwd~~~~------ 297 (719)
.++++++.++ .|++||+++. ..+..+ .+|...|.+++|++ ++. +|++++.||.|++||++++
T Consensus 225 -~~l~~~~~dg---~i~i~d~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 298 (357)
T 3i2n_A 225 -NKLVATSLEG---KFHVFDMRTQ-HPTKGFASVSEKAHKSTVWQVRHLP-QNRELFLTAGGAGGLHLWKYEYPIQRSKK 298 (357)
T ss_dssp -CEEEEEESTT---EEEEEEEEEE-ETTTEEEEEEEECCSSCEEEEEEET-TEEEEEEEEETTSEEEEEEEECCSCC--C
T ss_pred -CEEEEECCCC---eEEEEeCcCC-CcccceeeeccCCCcCCEEEEEECC-CCCcEEEEEeCCCcEEEeecCCCcccccc
Confidence 5788888888 9999999864 333333 48999999999999 766 8999999999999998753
Q ss_pred -------------eEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 298 -------------EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 298 -------------~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
+.+..+..|...|++++|++++..++++++.||.|+|||+.+.+.
T Consensus 299 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 299 DSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp CTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred cCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 467788899999999999999954445899999999999987654
No 32
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.7e-34 Score=301.95 Aligned_cols=319 Identities=14% Similarity=0.205 Sum_probs=251.2
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
+.+.|.+++|||||++|+++..++.+.+|...... .......|...|++++|++++ .
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~h~~~v~~~~~~~~~--------~ 64 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHA---------------RQINTLNHGEVVCAVTISNPT--------R 64 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEE---------------EEEEEECCSSCCCEEEECSSS--------S
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCcc---------------ccceeccCCCceEEEEEecCC--------c
Confidence 45679999999999999998877765433211111 112234688999999999998 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec--cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS--RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~--~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
+|++++ ||.|++||+.. +.....+..+. .|...|.+++|++ ++++|++++.||.|++||+.+.+....
T Consensus 65 ~l~~~~-dg~i~iw~~~~------~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~-- 134 (337)
T 1gxr_A 65 HVYTGG-KGCVKVWDISH------PGNKSPVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIK-- 134 (337)
T ss_dssp EEEEEC-BSEEEEEETTS------TTCCSCSEEEECSCTTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEE--
T ss_pred EEEEcC-CCeEEEEECCC------CCceeeeecccccCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCccee--
Confidence 899998 99999999953 21113334443 7899999999999 889999999999999999988763211
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~ 243 (719)
.....|...|.+++|++++ .+|++++.||.|++||+++++.+..+. .|...+.+++|++++ .+|++++.++
T Consensus 135 ---~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~-~~l~~~~~dg--- 205 (337)
T 1gxr_A 135 ---AELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISNDG-TKLWTGGLDN--- 205 (337)
T ss_dssp ---EEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTS-SEEEEEETTS---
T ss_pred ---eecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCceeeeee-cccCceEEEEECCCC-CEEEEEecCC---
Confidence 1123467789999999987 689999999999999999999888887 789999999999998 5788888888
Q ss_pred cEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEE
Q 046451 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVI 323 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~l 323 (719)
.|++||+++. +.+..+ .|...+.+++|++ ++++|++++.|+.|++||+.+++.. .+..|...|.+++|++++ .+|
T Consensus 206 ~i~~~d~~~~-~~~~~~-~~~~~v~~~~~s~-~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~-~~l 280 (337)
T 1gxr_A 206 TVRSWDLREG-RQLQQH-DFTSQIFSLGYCP-TGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCG-KWF 280 (337)
T ss_dssp EEEEEETTTT-EEEEEE-ECSSCEEEEEECT-TSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTS-SEE
T ss_pred cEEEEECCCC-ceEeee-cCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCC-CEE
Confidence 9999999875 444444 4778999999999 8999999999999999999888764 567899999999999999 799
Q ss_pred EEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCC
Q 046451 324 SASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 324 as~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
++++.||.|++||+.+++......+. .....++|+.+|++++....++
T Consensus 281 ~~~~~dg~i~~~~~~~~~~~~~~~~~------------~~v~~~~~s~~~~~l~~~~~dg 328 (337)
T 1gxr_A 281 VSTGKDNLLNAWRTPYGASIFQSKES------------SSVLSCDISVDDKYIVTGSGDK 328 (337)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECS------------SCEEEEEECTTSCEEEEEETTS
T ss_pred EEecCCCcEEEEECCCCeEEEEecCC------------CcEEEEEECCCCCEEEEecCCC
Confidence 99999999999999998776422111 1123466777777666555443
No 33
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.6e-35 Score=313.50 Aligned_cols=299 Identities=17% Similarity=0.215 Sum_probs=242.9
Q ss_pred cccCccceEEEcCC---C-CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCC
Q 046451 5 KGINRSASVAFAPD---A-PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSE 80 (719)
Q Consensus 5 ~~~~~V~~vafSpd---g-~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~ 80 (719)
.|.+.|.+++|+|+ + .++++++.+|.| +|||+..+.....+.......|...|++++|++++...
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v----------~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~- 84 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRV----------TLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTS- 84 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEE----------EEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTC-
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEE----------EEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCC-
Confidence 36789999999985 3 456666555554 89999876655444444444578899999999984210
Q ss_pred CCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCC
Q 046451 81 DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 81 ~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~ 160 (719)
..+|++|+.||.|++||+ .++ +.+..+.+|...|.+++|++.++++|++++.||.|++||+.+++...
T Consensus 85 ---~~~l~~~~~dg~i~v~d~------~~~---~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 152 (366)
T 3k26_A 85 ---HPLLAVAGSRGIIRIINP------ITM---QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVA 152 (366)
T ss_dssp ---CEEEEEEETTCEEEEECT------TTC---CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred ---CCEEEEecCCCEEEEEEc------hhc---eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEE
Confidence 169999999999999999 455 77888899999999999999778999999999999999999876554
Q ss_pred ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec---------------------------
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS--------------------------- 213 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~--------------------------- 213 (719)
.+.. ...|...|.+++|++++ .+|++++.||.|++||+++++.+..+.
T Consensus 153 ~~~~----~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 153 IFGG----VEGHRDEVLSADYDLLG-EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp EECS----TTSCSSCEEEEEECTTS-SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred Eecc----cccccCceeEEEECCCC-CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 4211 13578899999999997 599999999999999999876543332
Q ss_pred CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC-------------ceEEeeCCCCCeeEEEeCCCC--CC
Q 046451 214 ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS-------------PVKEFVGHTKGVIAMSWCPND--SS 278 (719)
Q Consensus 214 ~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~-------------~~~~~~~h~~~V~~v~~sp~d--~~ 278 (719)
..|...|.+++|+ + .++++++.|+ .|++||+++... .+..+..|...|.+++|++ + ++
T Consensus 228 ~~~~~~v~~~~~~--~-~~l~~~~~d~---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~ 300 (366)
T 3k26_A 228 DIHRNYVDCVRWL--G-DLILSKSCEN---AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSM-DFWQK 300 (366)
T ss_dssp SSCSSCCCEEEEE--T-TEEEEECSSS---EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEE-CTTSS
T ss_pred cCCcceEEEEEEc--C-CEEEEEecCC---EEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcC-CCCCc
Confidence 1388999999999 3 4789999888 999999986532 2667788999999999999 7 99
Q ss_pred eEEEEeCCCcEEEEECCCCe----EEEEecCC--CCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 279 YLLTCAKDNRTICWDTVSGE----IVSELPAG--TNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 279 ~l~sgs~Dg~I~iwd~~~~~----~~~~l~~h--~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
+|++++.||.|++||+.+++ .+..+..| ...|++++|++++ .+|++++.||.|+|||+.+
T Consensus 301 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 301 MLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDS-SILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTS-SEEEEEETTSEEEEEEC--
T ss_pred EEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCC-CeEEEEeCCCEEEEEEecC
Confidence 99999999999999999875 45577777 6889999999999 7999999999999999863
No 34
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9.7e-35 Score=361.49 Aligned_cols=353 Identities=17% Similarity=0.251 Sum_probs=292.8
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.|.+.|++++|||||++||+|+.||.| +|||+..+..... ...|...|++++|++++
T Consensus 613 ~h~~~v~~~~~s~~~~~l~s~~~d~~i----------~vw~~~~~~~~~~-----~~~h~~~v~~~~~s~~~-------- 669 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRIASCGADKTL----------QVFKAETGEKLLD-----IKAHEDEVLCCAFSSDD-------- 669 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCE----------EEEETTTCCEEEE-----ECCCSSCEEEEEECTTS--------
T ss_pred cccccEEEEEECCCCCEEEEEeCCCeE----------EEEECCCCCEEEE-----eccCCCCEEEEEEecCC--------
Confidence 367889999999999999999988876 8899876543322 24689999999999998
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC-CCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF-TPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~-~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
++|++++.||.|+|||+ .++ +.+..+.+|...|.+++|+++ +..++++|+.|+.|++||+.+++....+
T Consensus 670 ~~l~s~~~d~~v~vwd~------~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~- 739 (1249)
T 3sfz_A 670 SYIATCSADKKVKIWDS------ATG---KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM- 739 (1249)
T ss_dssp SEEEEEETTSEEEEEET------TTC---CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE-
T ss_pred CEEEEEeCCCeEEEEEC------CCC---ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee-
Confidence 79999999999999999 556 788899999999999999984 3458999999999999999987755442
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec------------------------------
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS------------------------------ 213 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~------------------------------ 213 (719)
.+|.+.|++++|++++ .+|++++.||+|++||+++++....+.
T Consensus 740 ------~~h~~~v~~~~~sp~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~ 812 (1249)
T 3sfz_A 740 ------FGHTNSVNHCRFSPDD-ELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK 812 (1249)
T ss_dssp ------CCCSSCEEEEEECSST-TEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSE
T ss_pred ------cCCCCCEEEEEEecCC-CEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCE
Confidence 3578899999999997 599999999999999998765433321
Q ss_pred ------------------------CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeE
Q 046451 214 ------------------------ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIA 269 (719)
Q Consensus 214 ------------------------~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~ 269 (719)
..|...|.+++|++++ .++++++.++ .|++||+.+. ..+..+.+|...|.+
T Consensus 813 l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~dg---~v~vwd~~~~-~~~~~~~~h~~~v~~ 887 (1249)
T 3sfz_A 813 IIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD-HLAVIALSQY---CVELWNIDSR-LKVADCRGHLSWVHG 887 (1249)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST-TEEEEECSSS---CEEEEETTTT-EEEEEECCCSSCEEE
T ss_pred EEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCC-CEEEEEeCCC---eEEEEEcCCC-ceeeecCCCccceEE
Confidence 1466788899999998 5788888887 8999999875 667788899999999
Q ss_pred EEeCCCCCCeEEEEeCCCcEEEEECC------------------------------------------------------
Q 046451 270 MSWCPNDSSYLLTCAKDNRTICWDTV------------------------------------------------------ 295 (719)
Q Consensus 270 v~~sp~d~~~l~sgs~Dg~I~iwd~~------------------------------------------------------ 295 (719)
++|++ ++.+|++++.||.|++||+.
T Consensus 888 v~~sp-dg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 966 (1249)
T 3sfz_A 888 VMFSP-DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSC 966 (1249)
T ss_dssp EEECT-TSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEE
T ss_pred EEECC-CCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEE
Confidence 99999 88888888888888888742
Q ss_pred -------------------------CCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCC
Q 046451 296 -------------------------SGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNF 350 (719)
Q Consensus 296 -------------------------~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~ 350 (719)
+++.+..+.+|...|.+++|++++ .+|++++.||.|++||+.+++......+.
T Consensus 967 ~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~- 1044 (1249)
T 3sfz_A 967 CCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADG-KTLISSSEDSVIQVWNWQTGDYVFLQAHQ- 1044 (1249)
T ss_dssp EEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSS-SCEEEECSSSBEEEEETTTTEEECCBCCS-
T ss_pred EEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCceEEEecCC-
Confidence 334445566788899999999999 79999999999999999998876533322
Q ss_pred CCCCccCcceecCCCceeeeeCCcEEEEccCCCCCccccccccccceeeccCCCCCC
Q 046451 351 SAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGMV 407 (719)
Q Consensus 351 ~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~ 407 (719)
..+....|......++.+.||.+..|+..++...+.+.+|.+.|.++++|+|+.-
T Consensus 1045 --~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~ 1099 (1249)
T 3sfz_A 1045 --ETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATK 1099 (1249)
T ss_dssp --SCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSS
T ss_pred --CcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCE
Confidence 2234555766667788999999999999888888889999999999999999876
No 35
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.7e-34 Score=305.77 Aligned_cols=254 Identities=17% Similarity=0.266 Sum_probs=223.3
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
..+|...|++++|++++ .+|++|+.||.|+|||+ .++ ..+..+..|...|.+++|++ ++++|
T Consensus 51 l~gH~~~v~~~~~s~d~--------~~l~s~s~Dg~v~iWd~------~~~---~~~~~~~~~~~~v~~~~~s~-~~~~l 112 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDS--------RLLLSASQDGKLIIWDS------YTT---NKVHAIPLRSSWVMTCAYAP-SGNYV 112 (340)
T ss_dssp ECCCSSCEEEEEECTTS--------SEEEEEETTTEEEEEET------TTC---CEEEEEECSSSCEEEEEECT-TSSEE
T ss_pred ecCCCCceEEEEECCCC--------CEEEEEeCCCcEEEEEC------CCC---CcceEeecCCccEEEEEECC-CCCEE
Confidence 35799999999999998 79999999999999998 455 77888889999999999999 88999
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR 219 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~ 219 (719)
++|+.|+.|++||+.+...... +.....+|.+.|.++.|++++ .|++++.|++|++||+++++.+..+. .|...
T Consensus 113 ~s~~~d~~v~iw~~~~~~~~~~---~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~ 186 (340)
T 1got_B 113 ACGGLDNICSIYNLKTREGNVR---VSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTFT-GHTGD 186 (340)
T ss_dssp EEEETTCEEEEEETTTCSBSCE---EEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEEC-CCSSC
T ss_pred EEEeCCCeEEEEECccCCCcce---eEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEEEEEc-CCCCc
Confidence 9999999999999987643221 112234578899999999885 58999999999999999999998888 89999
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI 299 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~ 299 (719)
|.+++|++++ .++++++.|+ .|++||+++. ..+..+.+|...|.+++|+| ++++|++|+.||.|+|||+++++.
T Consensus 187 v~~~~~~~~~-~~l~sg~~d~---~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 187 VMSLSLAPDT-RLFVSGACDA---SAKLWDVREG-MCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp EEEEEECTTS-SEEEEEETTS---CEEEEETTTC-SEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEE
T ss_pred eEEEEECCCC-CEEEEEeCCC---cEEEEECCCC-eeEEEEcCCcCCEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCcE
Confidence 9999999998 5899999998 9999999875 67888999999999999999 899999999999999999999988
Q ss_pred EEEecC--CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 300 VSELPA--GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 300 ~~~l~~--h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+..+.. +...|.+++|++++ .+|++|+.|+.|+|||+.+++...
T Consensus 261 ~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~~~~ 306 (340)
T 1got_B 261 LMTYSHDNIICGITSVSFSKSG-RLLLAGYDDFNCNVWDALKADRAG 306 (340)
T ss_dssp EEEECCTTCCSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEccCCcccceEEEEECCCC-CEEEEECCCCeEEEEEcccCcEee
Confidence 877653 33479999999999 899999999999999998877654
No 36
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.3e-35 Score=320.27 Aligned_cols=284 Identities=13% Similarity=0.151 Sum_probs=231.7
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEE
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVA 88 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~la 88 (719)
.+++++|+|||++|++|+.||.| ++||+........+ .....+....|++++ ++|+
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v----------~i~d~~~~~~~~~~------~~~~~~~~~~~~~~~--------~~l~ 113 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHD----------FLFNTIIRDGSKML------KRADYTAVDTAKLQM--------RRFI 113 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEE----------EEEECCSEETTTTS------CSCCEEEEEEECSSS--------CEEE
T ss_pred cccceeeeecCCeEEEEEcCCcE----------EEEEecccceeeEE------ecCCceEEEEEecCC--------CEEE
Confidence 35689999999999999988876 88998865543322 122444555788887 7999
Q ss_pred EEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCC
Q 046451 89 GGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGN 168 (719)
Q Consensus 89 sgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~ 168 (719)
+|+.||.|+|||+ .++ .....+..|.+.|.+++|++ ++++|++++.|+.|++||+.+++....+
T Consensus 114 ~~~~dg~i~iwd~------~~~---~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~------ 177 (420)
T 3vl1_A 114 LGTTEGDIKVLDS------NFN---LQREIDQAHVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTL------ 177 (420)
T ss_dssp EEETTSCEEEECT------TSC---EEEEETTSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEE------
T ss_pred EEECCCCEEEEeC------CCc---ceeeecccccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEE------
Confidence 9999999999998 444 66677789999999999999 7899999999999999999988766552
Q ss_pred CCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC--CC---------------------CCceeEEEE
Q 046451 169 GSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE--SI---------------------KRRCSVLQW 225 (719)
Q Consensus 169 ~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~--~~---------------------~~~i~~l~~ 225 (719)
..|...|.+++|++++ .+|++++.||+|++||+++++.+..+.. .+ ...+.+++|
T Consensus 178 -~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~ 255 (420)
T 3vl1_A 178 -IGHRATVTDIAIIDRG-RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEF 255 (420)
T ss_dssp -ECCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCS
T ss_pred -cCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEE
Confidence 3478899999999997 5899999999999999999998888763 12 244555666
Q ss_pred CCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCC-eEEEEeCCCcEEEEECCCCeE-EEEe
Q 046451 226 NPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS-YLLTCAKDNRTICWDTVSGEI-VSEL 303 (719)
Q Consensus 226 sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~-~l~sgs~Dg~I~iwd~~~~~~-~~~l 303 (719)
++++ .+|++++.|+ .|++||+++..........|...|.+++|++ ++. +|++++.||.|++||+++++. +..+
T Consensus 256 s~~~-~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~ 330 (420)
T 3vl1_A 256 GTYG-KYVIAGHVSG---VITVHNVFSKEQTIQLPSKFTCSCNSLTVDG-NNANYIYAGYENGMLAQWDLRSPECPVGEF 330 (420)
T ss_dssp SCTT-EEEEEEETTS---CEEEEETTTCCEEEEECCTTSSCEEEEEECS-SCTTEEEEEETTSEEEEEETTCTTSCSEEE
T ss_pred cCCC-CEEEEEcCCC---eEEEEECCCCceeEEcccccCCCceeEEEeC-CCCCEEEEEeCCCeEEEEEcCCCcCchhhh
Confidence 8887 5788999888 8999999886544444456889999999999 666 999999999999999998754 6667
Q ss_pred cC-CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 304 PA-GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 304 ~~-h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
.. |...|.++.|. ++ .+|++++.|+.|+||++....
T Consensus 331 ~~~~~~~v~~~~~~-~~-~~l~s~~~d~~v~iw~~~~~~ 367 (420)
T 3vl1_A 331 LINEGTPINNVYFA-AG-ALFVSSGFDTSIKLDIISDPE 367 (420)
T ss_dssp EESTTSCEEEEEEE-TT-EEEEEETTTEEEEEEEECCTT
T ss_pred hccCCCCceEEEeC-CC-CEEEEecCCccEEEEeccCCC
Confidence 66 66678888665 66 699999999999999998743
No 37
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-34 Score=305.52 Aligned_cols=295 Identities=13% Similarity=0.168 Sum_probs=248.6
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.|.+.|++++|++||++||+|+.||.| +|||+..+.... ....|...|++++|++++
T Consensus 30 ~h~~~v~~~~~s~~~~~l~~~~~dg~i----------~vwd~~~~~~~~-----~~~~h~~~v~~~~~~~~~-------- 86 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGDLLFSCSKDSSA----------SVWYSLNGERLG-----TLDGHTGTIWSIDVDCFT-------- 86 (369)
T ss_dssp CCSSCEEEEEECTTSCEEEEEESSSCE----------EEEETTTCCEEE-----EECCCSSCEEEEEECTTS--------
T ss_pred EeeceEEEEEEcCCCCEEEEEeCCCEE----------EEEeCCCchhhh-----hhhhcCCcEEEEEEcCCC--------
Confidence 366889999999999999999888876 788887554322 224588999999999988
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC-----CcEEEEcCCCCCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD-----GEICIWDLSAPAEP 159 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d-----g~I~iwdl~~~~~~ 159 (719)
++|++++.||.|++||+ .++ +.+..+. |...|.+++|++ ++++|++++.+ +.|++||+......
T Consensus 87 ~~l~s~~~dg~i~iwd~------~~~---~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~ 155 (369)
T 3zwl_B 87 KYCVTGSADYSIKLWDV------SNG---QCVATWK-SPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSAT 155 (369)
T ss_dssp SEEEEEETTTEEEEEET------TTC---CEEEEEE-CSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTT
T ss_pred CEEEEEeCCCeEEEEEC------CCC---cEEEEee-cCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccc
Confidence 79999999999999999 444 6666666 889999999999 88999999999 99999999877654
Q ss_pred CccCCccC----CCCCCCC--CeEEEEecCCCCcEEEEEeCCCcEEEEECCC-CceeEEecCCCCCceeEEEECCCCCcE
Q 046451 160 SHFPPLRG----NGSAAQG--EISFVSWNSKVQHILASTSYNGTTVVWDLKK-QKPVISFSESIKRRCSVLQWNPDVATQ 232 (719)
Q Consensus 160 ~~~~~l~~----~~~~h~~--~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~-~~~~~~~~~~~~~~i~~l~~sp~g~~~ 232 (719)
..+..... ....|.. .+.+++|++++ .+|++++.||.|++||+++ .+.+..+. .+...|.+++|++++ .+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~-~~ 232 (369)
T 3zwl_B 156 HELTKVSEEPIHKIITHEGLDAATVAGWSTKG-KYIIAGHKDGKISKYDVSNNYEYVDSID-LHEKSISDMQFSPDL-TY 232 (369)
T ss_dssp CCEEEECSSCSEEEECCTTCCCEEEEEECGGG-CEEEEEETTSEEEEEETTTTTEEEEEEE-CCSSCEEEEEECTTS-SE
T ss_pred eeecccccceeeeccCCcCccceeEEEEcCCC-CEEEEEcCCCEEEEEECCCCcEeEEEEe-cCCCceeEEEECCCC-CE
Confidence 33211100 0112333 89999999997 5899999999999999998 67777777 789999999999998 57
Q ss_pred EEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCC--------------cEEEEECCCCe
Q 046451 233 LVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDN--------------RTICWDTVSGE 298 (719)
Q Consensus 233 l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg--------------~I~iwd~~~~~ 298 (719)
|++++.|+ .|++||+++. +.+..+. +...+.+++|++ ++.++++++.++ .|++||+.+++
T Consensus 233 l~~~~~d~---~i~v~d~~~~-~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 233 FITSSRDT---NSFLVDVSTL-QVLKKYE-TDCPLNTAVITP-LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp EEEEETTS---EEEEEETTTC-CEEEEEE-CSSCEEEEEECS-SSSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred EEEecCCc---eEEEEECCCC-ceeeeec-CCCCceeEEecC-CCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 88888888 8999999875 5566665 778999999999 999999999888 89999999999
Q ss_pred EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 299 ~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
.+..+.+|...|.+++|++++ .+|++++.||.|+||+++++...
T Consensus 307 ~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~v~iw~~~~~~~~ 350 (369)
T 3zwl_B 307 EIGRVQGHFGPLNTVAISPQG-TSYASGGEDGFIRLHHFEKSYFD 350 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEEECHHHHT
T ss_pred chhheecccCcEEEEEECCCC-CEEEEEcCCCeEEEEECccccch
Confidence 999999999999999999999 79999999999999999987653
No 38
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-35 Score=322.90 Aligned_cols=311 Identities=15% Similarity=0.245 Sum_probs=244.2
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
+.+...|.+++|++|+++||+|+.||.| ++||+........ .+.....|...|++++|++++.
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v----------~vw~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~------ 126 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSL----------ELYSTNEANNAIN-SMARFSNHSSSVKTVKFNAKQD------ 126 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCE----------EEECCSSTTSCCC-EEEECCCSSSCCCEEEECSSST------
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeE----------EEeeccccccccc-chhhccCCccceEEEEEcCCCC------
Confidence 4566789999999999999999888876 8898875322211 1233456899999999999832
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
.+|++++.||.|++||+.................+..|...|.+++|+++++.+|++++.||.|++||+.+.+....+.
T Consensus 127 -~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 205 (416)
T 2pm9_A 127 -NVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLS 205 (416)
T ss_dssp -TBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEEC
T ss_pred -CEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEe
Confidence 7999999999999999954220000001122234567999999999999548999999999999999999876654432
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC---cEEEEECCCC-ceeEEecCCCCCceeEEEECC-CCCcEEEEEeC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNG---TTVVWDLKKQ-KPVISFSESIKRRCSVLQWNP-DVATQLVVASD 238 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg---~I~iwd~~~~-~~~~~~~~~~~~~i~~l~~sp-~g~~~l~~~s~ 238 (719)
......+|...|.+++|++++..+|++++.|+ .|++||++++ +.+..+...|...|.+++|++ ++ .+|++++.
T Consensus 206 -~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~~l~s~~~ 283 (416)
T 2pm9_A 206 -YTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDE-HLLLSSGR 283 (416)
T ss_dssp -CCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCS-SCEEEEES
T ss_pred -ccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCC-CeEEEEeC
Confidence 11112234778999999999877999999999 9999999987 444444325889999999999 55 68999999
Q ss_pred CCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCC-CeEEEEeCCCcEEEEECCCCeEEEEec-------------
Q 046451 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDS-SYLLTCAKDNRTICWDTVSGEIVSELP------------- 304 (719)
Q Consensus 239 d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~-~~l~sgs~Dg~I~iwd~~~~~~~~~l~------------- 304 (719)
|+ .|++||+++. +.+..+.+|...|.+++|++ ++ .+|++++.|+.|+|||+.+++......
T Consensus 284 dg---~v~~wd~~~~-~~~~~~~~~~~~v~~~~~s~-~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (416)
T 2pm9_A 284 DN---TVLLWNPESA-EQLSQFPARGNWCFKTKFAP-EAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDF 358 (416)
T ss_dssp SS---EEEEECSSSC-CEEEEEECSSSCCCCEEECT-TCTTEEEECCSSSEEEEEESCCCCCSSCC--------------
T ss_pred CC---CEEEeeCCCC-ccceeecCCCCceEEEEECC-CCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccc
Confidence 88 9999999875 77888999999999999999 66 899999999999999998765322211
Q ss_pred ----------------------CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 046451 305 ----------------------AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 305 ----------------------~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~ 340 (719)
.|...+.+++|+++| ++|++++.|+.|+||++.+.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 359 WNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGG-KLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp --------CCSCCCSSCCCCCSTTCCCSCCCEEETTT-EEECBCTTSSCBCCBCCCCC
T ss_pred cccccccccccccccccccCCccccCCccceEEeeCC-eEEEEeCCCCeEEEEEeccC
Confidence 156677899999999 89999999999999999874
No 39
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=8.2e-35 Score=320.69 Aligned_cols=290 Identities=13% Similarity=0.248 Sum_probs=223.4
Q ss_pred ccCccceEEEcC-CCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 6 GINRSASVAFAP-DAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 6 ~~~~V~~vafSp-dg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
+..+|+||+|+| ++++||+|+.||.| +|||+....... .....+|...|++|+|+|.+.
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~dg~i----------~lWd~~~~~~~~---~~~~~gH~~~V~~l~f~p~~~------- 177 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKGGDI----------MLWNFGIKDKPT---FIKGIGAGGSITGLKFNPLNT------- 177 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETTSCE----------EEECSSCCSCCE---EECCCSSSCCCCEEEECSSCT-------
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEE----------EEEECCCCCcee---EEEccCCCCCEEEEEEeCCCC-------
Confidence 456799999999 56799999988877 889987654432 233467999999999998432
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeee---ccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCc
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL---SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSH 161 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l---~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~ 161 (719)
.+|++|+.||+|+|||++. .....+ ..+...+.+++|++ ++++|++|+.||.|++||++... +..
T Consensus 178 ~~l~s~s~D~~v~iwd~~~----------~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~~~~-~~~ 245 (435)
T 4e54_B 178 NQFYASSMEGTTRLQDFKG----------NILRVFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMDGKE-LWN 245 (435)
T ss_dssp TEEEEECSSSCEEEEETTS----------CEEEEEECCSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEESSSCB-CCC
T ss_pred CEEEEEeCCCEEEEeeccC----------CceeEEeccCCCCccEEEEEECC-CCCEEEEEeCCCcEeeeccCcce-eEE
Confidence 7999999999999999842 222222 23445678999999 88999999999999999987532 222
Q ss_pred cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec--CCCCCceeEEEECCCCCcEEEEEeCC
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS--ESIKRRCSVLQWNPDVATQLVVASDE 239 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~--~~~~~~i~~l~~sp~g~~~l~~~s~d 239 (719)
...|...|++++|++++..+|++++.|++|+|||+++.+....+. ..|...|.+++|+++| .+|++++.|
T Consensus 246 -------~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg-~~l~s~~~D 317 (435)
T 4e54_B 246 -------LRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDG-ARLLTTDQK 317 (435)
T ss_dssp -------SBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTS-SEEEEEESS
T ss_pred -------EecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCC-CeeEEEcCC
Confidence 235788999999999988899999999999999999876544332 2688999999999998 578999999
Q ss_pred CCCCcEEEEecCCCCCceEEeeCCCC------CeeEEEeCCCCCCeEEEEe------------CCCcEEEEECCCCeEEE
Q 046451 240 DSSPALRLWDMRNTMSPVKEFVGHTK------GVIAMSWCPNDSSYLLTCA------------KDNRTICWDTVSGEIVS 301 (719)
Q Consensus 240 ~~~~~I~lwDl~~~~~~~~~~~~h~~------~V~~v~~sp~d~~~l~sgs------------~Dg~I~iwd~~~~~~~~ 301 (719)
+ .|+|||+++. .....+..|.. .+..+.|++ ++.++++++ .++.|++||..+++.+.
T Consensus 318 ~---~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~ 392 (435)
T 4e54_B 318 S---EIRVYSASQW-DCPLGLIPHPHRHFQHLTPIKAAWHP-RYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMC 392 (435)
T ss_dssp S---CEEEEESSSS-SSEEEECCCCCCCCSSSCCCBCEECS-SSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEE
T ss_pred C---EEEEEECCCC-ccceEEecccccccccceeEEEEEcC-CCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEE
Confidence 8 8999999875 44455544432 234456777 556665554 34679999999999988
Q ss_pred Eec-CCCCCeEEe-EEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 302 ELP-AGTNWNFDI-HWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 302 ~l~-~h~~~v~~l-~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
.+. .|...|.++ +|+|+| .+|++|+ |++|+|||+++++.
T Consensus 393 ~l~~~~~~~v~s~~~fspdg-~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 393 QLYDPESSGISSLNEFNPMG-DTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp EECCSSCCCCCCEEEECTTS-SCEEEEC-SSEEEECCCC----
T ss_pred EEeCCCCCcEEEEEEECCCC-CEEEEEc-CCcEEEEECCcCee
Confidence 865 677788887 699999 7888876 88999999998765
No 40
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2e-34 Score=311.33 Aligned_cols=283 Identities=16% Similarity=0.265 Sum_probs=227.9
Q ss_pred cccCccceEEEcCCC-CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecC-CCCCCCCC
Q 046451 5 KGINRSASVAFAPDA-PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGK-NGSGSEDF 82 (719)
Q Consensus 5 ~~~~~V~~vafSpdg-~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp-~g~~~~~~ 82 (719)
.|.+.|.+++|++++ ++||+|+.||.| +|||+........ ....+|...|++++|++ ++
T Consensus 71 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i----------~iwd~~~~~~~~~---~~~~~h~~~v~~~~~~~~~~------ 131 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHPTTVAVGSKGGDI----------ILWDYDVQNKTSF---IQGMGPGDAITGMKFNQFNT------ 131 (383)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEEBTSCE----------EEEETTSTTCEEE---ECCCSTTCBEEEEEEETTEE------
T ss_pred CCCCCEEEEEECCCCCCEEEEEcCCCeE----------EEEeCCCccccee---eecCCcCCceeEEEeCCCCC------
Confidence 356889999999999 999999988876 8899885543322 22346899999999999 54
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec---cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCC
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS---RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEP 159 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~---~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~ 159 (719)
.+|++++.||.|++||+.. ..+..+. .|...|.+++|++ ++++|++++.|+.|++||+. .+..
T Consensus 132 --~~l~s~~~d~~i~iwd~~~----------~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~ 197 (383)
T 3ei3_B 132 --NQLFVSSIRGATTLRDFSG----------SVIQVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGLD-GHEI 197 (383)
T ss_dssp --EEEEEEETTTEEEEEETTS----------CEEEEEECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEETT-SCEE
T ss_pred --CEEEEEeCCCEEEEEECCC----------CceEEEeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEECC-CCEE
Confidence 7999999999999999842 3344443 3458899999999 88999999999999999994 3332
Q ss_pred CccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC----CceeEEecCCCCCceeEEEECC-CCCcEEE
Q 046451 160 SHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK----QKPVISFSESIKRRCSVLQWNP-DVATQLV 234 (719)
Q Consensus 160 ~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~----~~~~~~~~~~~~~~i~~l~~sp-~g~~~l~ 234 (719)
.. + ..|...|.+++|++++..+|++++.|+.|++||+++ +..+..+. |...|.+++|++ ++ .+|+
T Consensus 198 ~~---~----~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~-~~l~ 267 (383)
T 3ei3_B 198 FK---E----KLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMP--HEKPVNAAYFNPTDS-TKLL 267 (383)
T ss_dssp EE---E----ECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEE--CSSCEEEEEECTTTS-CEEE
T ss_pred EE---e----ccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEec--CCCceEEEEEcCCCC-CEEE
Confidence 22 2 347789999999999865999999999999999998 55666664 899999999999 87 5788
Q ss_pred EEeCCCCCCcEEEEecCCCCCceEEeeCCC-----------------CCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC
Q 046451 235 VASDEDSSPALRLWDMRNTMSPVKEFVGHT-----------------KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297 (719)
Q Consensus 235 ~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~-----------------~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~ 297 (719)
+++.|+ .|++||+++.. .+..+.+|. ..+..++|++ ++++ +++.|+.|+|||+.++
T Consensus 268 ~~~~d~---~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~-dg~~--s~s~d~~i~iwd~~~~ 340 (383)
T 3ei3_B 268 TTDQRN---EIRVYSSYDWS-KPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYP-DDQL--LLNDKRTIDIYDANSG 340 (383)
T ss_dssp EEESSS---EEEEEETTBTT-SCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBC-CTTT--CTTCCCCEEEEETTTC
T ss_pred EEcCCC---cEEEEECCCCc-cccccccccccccccccceEEeccCCCCceEEEecC-Cccc--ccCCCCeEEEEecCCC
Confidence 999888 99999998753 344454432 3344566777 6666 7789999999999999
Q ss_pred eEEEEecC--CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 298 EIVSELPA--GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 298 ~~~~~l~~--h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
+.+..+.+ |...+..++|++++ .+|++++ |+.|+|||+++
T Consensus 341 ~~~~~l~~~~~~~~~~~~~~s~~g-~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 341 GLVHQLRDPNAAGIISLNKFSPTG-DVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CEEEEECBTTBCSCCCEEEECTTS-SEEEEEE-TTEEEEEECC-
T ss_pred ceeeeecCCCCCceEEEEEEecCc-cEEEEec-CCcEEEEecCC
Confidence 99999987 45667778999999 7999997 99999999975
No 41
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.1e-34 Score=310.93 Aligned_cols=297 Identities=12% Similarity=0.132 Sum_probs=241.5
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
|.+.|.+++|++||++||+|+.||.| +|||++...... +.....|...|++++|++++ .
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v----------~i~~~~~~~~~~---~~~~~~h~~~v~~~~~~~~~--------~ 65 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEV----------HIYEKSGNKWVQ---VHELKEHNGQVTGVDWAPDS--------N 65 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEE----------EEEEEETTEEEE---EEEEECCSSCEEEEEEETTT--------T
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEE----------EEEeCCCCcEEe---eeeecCCCCcccEEEEeCCC--------C
Confidence 56889999999999999999887766 889988553111 12224688999999999988 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|++++.||.|++||+.. + .......+..|...|.+++|++ ++++|++++.|+.|++||+........ .
T Consensus 66 ~l~~~~~dg~i~vwd~~~------~-~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~---~ 134 (372)
T 1k8k_C 66 RIVTCGTDRNAYVWTLKG------R-TWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWV---C 134 (372)
T ss_dssp EEEEEETTSCEEEEEEET------T-EEEEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEE---E
T ss_pred EEEEEcCCCeEEEEECCC------C-eeeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCccee---e
Confidence 999999999999999842 2 0022334567999999999999 789999999999999999988764222 1
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC------------------CCceeEEecCCCCCceeEEEECC
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK------------------KQKPVISFSESIKRRCSVLQWNP 227 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~------------------~~~~~~~~~~~~~~~i~~l~~sp 227 (719)
......|...|.+++|++++ .+|++++.||.|++||++ .++.+..+. .|...|.+++|++
T Consensus 135 ~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~ 212 (372)
T 1k8k_C 135 KHIKKPIRSTVLSLDWHPNS-VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSA 212 (372)
T ss_dssp EEECTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECS
T ss_pred eeeecccCCCeeEEEEcCCC-CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECC
Confidence 11223567899999999997 699999999999999954 567777777 7889999999999
Q ss_pred CCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC--CeE------
Q 046451 228 DVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS--GEI------ 299 (719)
Q Consensus 228 ~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~--~~~------ 299 (719)
++ .+|++++.|+ .|++||+++. +.+..+..|...|.+++|++ ++.+|+++ .|+.|++||+.+ ++.
T Consensus 213 ~~-~~l~~~~~d~---~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~ 285 (372)
T 1k8k_C 213 NG-SRVAWVSHDS---TVCLADADKK-MAVATLASETLPLLAVTFIT-ESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRL 285 (372)
T ss_dssp SS-SEEEEEETTT---EEEEEEGGGT-TEEEEEECSSCCEEEEEEEE-TTEEEEEE-TTSSCEEEEEETTTTEEEECCCC
T ss_pred CC-CEEEEEeCCC---EEEEEECCCC-ceeEEEccCCCCeEEEEEec-CCCEEEEE-eCCeEEEEEccCcCceEEEeecc
Confidence 98 5888999888 9999999875 67888999999999999999 88877777 999999999987 431
Q ss_pred --------------------------E------EEe-cCCCCCeEEeEEcCCCC---CEEEEEeCCCcEEEEeCCCCccc
Q 046451 300 --------------------------V------SEL-PAGTNWNFDIHWYPKIP---GVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 300 --------------------------~------~~l-~~h~~~v~~l~~spdg~---~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
. ..+ .+|...|++++|++... .+|++++.||.|+|||+.+++..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 286 DVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESA 365 (372)
T ss_dssp CCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHHH
T ss_pred CccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhHh
Confidence 0 233 48999999999885544 69999999999999999886553
No 42
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=9.1e-34 Score=298.91 Aligned_cols=290 Identities=14% Similarity=0.236 Sum_probs=233.6
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
.+|.+.|++++|++++. ++|++|+.|++|++|++..... ..+ ..+..+.+|...|.+++|++ ++++|+
T Consensus 14 ~gH~~~V~~l~~~~~~~-------~~l~s~s~D~~v~~W~~~~~~~-~~~---~~~~~~~~h~~~v~~~~~s~-dg~~l~ 81 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQP-------NLLLSASRDKTLISWKLTGDDQ-KFG---VPVRSFKGHSHIVQDCTLTA-DGAYAL 81 (319)
T ss_dssp CCCSSCEEEEEECSSCT-------TEEEEEETTSEEEEEEEEEETT-EEE---EEEEEEECCSSCEEEEEECT-TSSEEE
T ss_pred ccccceEEEEEccCCCc-------cEEEEecCCccEEEecCCCCCc-ccc---ccceEEeCCcccEEEEEECC-CCCEEE
Confidence 56999999999998753 6999999999999999843111 112 35678899999999999999 889999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
+|+.|++|+|||+.+++....+ .+|...|.+++|++++ .+|++++.|++|++||++ ++.+..+. .|...|
T Consensus 82 s~s~D~~v~~wd~~~~~~~~~~-------~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~-~~~~~~~~-~h~~~v 151 (319)
T 3frx_A 82 SASWDKTLRLWDVATGETYQRF-------VGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIK-GQCLATLL-GHNDWV 151 (319)
T ss_dssp EEETTSEEEEEETTTTEEEEEE-------ECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETT-SCEEEEEC-CCSSCE
T ss_pred EEeCCCEEEEEECCCCCeeEEE-------ccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECC-CCeEEEEe-ccCCcE
Confidence 9999999999999988755442 3578899999999997 599999999999999997 45666666 789999
Q ss_pred eEEEECCCC-----CcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 221 SVLQWNPDV-----ATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 221 ~~l~~sp~g-----~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
.++.|++.. ...+++++.|+ .|++||+++. .....+.+|...|.+++|+| ++++|++++.||.|+|||+.
T Consensus 152 ~~~~~~~~~~~~~~~~~l~s~~~d~---~i~~wd~~~~-~~~~~~~~h~~~v~~~~~sp-~g~~l~s~~~dg~i~iwd~~ 226 (319)
T 3frx_A 152 SQVRVVPNEKADDDSVTIISAGNDK---MVKAWNLNQF-QIEADFIGHNSNINTLTASP-DGTLIASAGKDGEIMLWNLA 226 (319)
T ss_dssp EEEEECCC------CCEEEEEETTS---CEEEEETTTT-EEEEEECCCCSCEEEEEECT-TSSEEEEEETTCEEEEEETT
T ss_pred EEEEEccCCCCCCCccEEEEEeCCC---EEEEEECCcc-hhheeecCCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECC
Confidence 999999863 24799999998 9999999864 56778889999999999999 99999999999999999999
Q ss_pred CCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcE
Q 046451 296 SGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKL 375 (719)
Q Consensus 296 ~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gkl 375 (719)
+++.+..+..+ ..|.+++|+|++ .+|++++ ++.+++|+++...........+...... .......++|++||++
T Consensus 227 ~~~~~~~~~~~-~~v~~~~~sp~~-~~la~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~spdg~~ 300 (319)
T 3frx_A 227 AKKAMYTLSAQ-DEVFSLAFSPNR-YWLAAAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKA---AEPHAVSLAWSADGQT 300 (319)
T ss_dssp TTEEEEEEECC-SCEEEEEECSSS-SEEEEEE-TTEEEEEEETTEEEEEEECCCCTTCCGG---GCCCEEEEEECTTSSE
T ss_pred CCcEEEEecCC-CcEEEEEEcCCC-CEEEEEc-CCCcEEEEeCcCeeeeccCccccccccC---cCcceeEEEECCCCCE
Confidence 99999998765 569999999999 7888877 5569999999877655333222211000 0111235788889888
Q ss_pred EEEccCCC
Q 046451 376 VSFHPKSS 383 (719)
Q Consensus 376 v~~~~~~~ 383 (719)
++.+..++
T Consensus 301 l~sg~~Dg 308 (319)
T 3frx_A 301 LFAGYTDN 308 (319)
T ss_dssp EEEEETTS
T ss_pred EEEeecCc
Confidence 77665554
No 43
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.5e-33 Score=301.90 Aligned_cols=257 Identities=16% Similarity=0.216 Sum_probs=222.2
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
.+|...|++++|++++ .+|++|+.||.|+|||. .++ .....+..|...|.+++|++ ++.+|+
T Consensus 61 ~gH~~~V~~~~~s~d~--------~~l~s~s~Dg~v~vWd~------~~~---~~~~~~~~~~~~v~~~~~sp-~g~~la 122 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDK--------RRIVSSSQDGKVIVWDS------FTT---NKEHAVTMPCTWVMACAYAP-SGCAIA 122 (354)
T ss_dssp ECCSSCEEEEEECTTS--------SEEEEEETTSEEEEEET------TTC---CEEEEEECSSSCCCEEEECT-TSSEEE
T ss_pred cCCCCeEEEEEECCCC--------CEEEEEeCCCeEEEEEC------CCC---CcceEEecCCCCEEEEEECC-CCCEEE
Confidence 5799999999999998 79999999999999998 445 66777888999999999999 899999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
+++.|+.|++|++.......... .......|...|.+++|++++ ..|++++.|++|++||+++++.+..+. .|...|
T Consensus 123 sg~~d~~i~v~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~~~~~~~~~-~h~~~v 199 (354)
T 2pbi_B 123 CGGLDNKCSVYPLTFDKNENMAA-KKKSVAMHTNYLSACSFTNSD-MQILTASGDGTCALWDVESGQLLQSFH-GHGADV 199 (354)
T ss_dssp EESTTSEEEEEECCCCTTCCSGG-GCEEEEECSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCE
T ss_pred EeeCCCCEEEEEEeccccccccc-cceeeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEc-CCCCCe
Confidence 99999999999987653221110 112223578899999999997 589999999999999999999999988 899999
Q ss_pred eEEEECCCC-CcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE
Q 046451 221 SVLQWNPDV-ATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI 299 (719)
Q Consensus 221 ~~l~~sp~g-~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~ 299 (719)
.+++|+++. ..+|++++.|+ .|++||+++. +++..+.+|...|.+++|+| ++.+|++++.|++|++||+++++.
T Consensus 200 ~~~~~~~~~~g~~l~sgs~Dg---~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 200 LCLDLAPSETGNTFVSGGCDK---KAMVWDMRSG-QCVQAFETHESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADRE 274 (354)
T ss_dssp EEEEECCCSSCCEEEEEETTS---CEEEEETTTC-CEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEEEeCCCCCEEEEEeCCC---eEEEEECCCC-cEEEEecCCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcE
Confidence 999998853 26899999998 9999999875 67888999999999999999 899999999999999999999988
Q ss_pred EEEecCC--CCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 300 VSELPAG--TNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 300 ~~~l~~h--~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+..+..+ ...+.+++|++++ .+|++++.|+.|+|||+.+++.+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~~~~ 320 (354)
T 2pbi_B 275 VAIYSKESIIFGASSVDFSLSG-RLLFAGYNDYTINVWDVLKGSRVS 320 (354)
T ss_dssp EEEECCTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCSEEE
T ss_pred EEEEcCCCcccceeEEEEeCCC-CEEEEEECCCcEEEEECCCCceEE
Confidence 7776543 3468999999999 799999999999999998887654
No 44
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=294.71 Aligned_cols=286 Identities=18% Similarity=0.212 Sum_probs=239.8
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.|.+.|.+++| +++++||+|+.||.| ++||+....... ....|...|.+++|++++
T Consensus 16 ~h~~~v~~~~~-~~~~~l~s~~~dg~v----------~vw~~~~~~~~~-----~~~~~~~~v~~~~~~~~~-------- 71 (313)
T 3odt_A 16 GHDQDVRDVVA-VDDSKVASVSRDGTV----------RLWSKDDQWLGT-----VVYTGQGFLNSVCYDSEK-------- 71 (313)
T ss_dssp CCSSCEEEEEE-EETTEEEEEETTSEE----------EEEEESSSEEEE-----EEEECSSCEEEEEEETTT--------
T ss_pred CCCCCcEEEEe-cCCCEEEEEEcCCcE----------EEEECCCCEEEE-----EeecCCccEEEEEECCCC--------
Confidence 36688999999 999999999988877 889986543222 224578999999999998
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
.+|++++.||.|++|++.. ......+..+..|...|.+++| ++++|++++.||.|++|| ..+....
T Consensus 72 ~~l~~~~~dg~i~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~i~~~d--~~~~~~~--- 137 (313)
T 3odt_A 72 ELLLFGGKDTMINGVPLFA------TSGEDPLYTLIGHQGNVCSLSF---QDGVVISGSWDKTAKVWK--EGSLVYN--- 137 (313)
T ss_dssp TEEEEEETTSCEEEEETTC------CTTSCC-CEECCCSSCEEEEEE---ETTEEEEEETTSEEEEEE--TTEEEEE---
T ss_pred CEEEEecCCCeEEEEEeee------cCCCCcccchhhcccCEEEEEe---cCCEEEEEeCCCCEEEEc--CCcEEEe---
Confidence 7999999999999999953 2222667788899999999999 457999999999999999 2222211
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
...|...+.++.|++....+|++++.||.|++|| ..+....+...+...+.+++|++++. +++++.++ .
T Consensus 138 ----~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg---~ 206 (313)
T 3odt_A 138 ----LQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDG---L 206 (313)
T ss_dssp ----EECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE--EEEEETTS---E
T ss_pred ----cccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe--EEEccCCC---e
Confidence 2347779999999983347999999999999999 45666666645899999999999984 88898888 9
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEE
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~la 324 (719)
|++||+++. +.+..+.+|...|.+++|++ ++ .|++++.||.|++||+.+++.+..+..|...|.+++|++++ . ++
T Consensus 207 i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~-~-~~ 281 (313)
T 3odt_A 207 IKLVDMHTG-DVLRTYEGHESFVYCIKLLP-NG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNG-D-II 281 (313)
T ss_dssp EEEEETTTC-CEEEEEECCSSCEEEEEECT-TS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTS-C-EE
T ss_pred EEEEECCch-hhhhhhhcCCceEEEEEEec-CC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCC-C-EE
Confidence 999999875 67888999999999999999 66 69999999999999999999999999999999999999999 4 56
Q ss_pred EEeCCCcEEEEeCCCCcccc
Q 046451 325 ASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 325 s~s~Dg~I~iwd~~~~~~~~ 344 (719)
+++.||.|++||+++++...
T Consensus 282 ~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 282 VGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp EEETTSCEEEEESCGGGCCC
T ss_pred EEeCCCcEEEEeCCCCceee
Confidence 68889999999999987755
No 45
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=7.9e-34 Score=337.42 Aligned_cols=358 Identities=18% Similarity=0.253 Sum_probs=280.9
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.|.+.|.+++|||||++||+|+.+|.| +|||+..+..... ...|...|++++|++++
T Consensus 11 ~h~~~v~~i~~sp~~~~la~~~~~g~v----------~iwd~~~~~~~~~-----~~~~~~~v~~~~~s~~~-------- 67 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRV----------EIWNYETQVEVRS-----IQVTETPVRAGKFIARK-------- 67 (814)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEE----------EEEETTTTEEEEE-----EECCSSCEEEEEEEGGG--------
T ss_pred cCCCceEEEEECCCCCEEEEEeCCCEE----------EEEECCCCceEEE-----EecCCCcEEEEEEeCCC--------
Confidence 366899999999999999999888776 8898875443222 23588999999999998
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
.+|++|+.||.|+|||+ .++ +.+..+..|.+.|.+++|++ ++.+|++++.||.|++||+.++.....
T Consensus 68 ~~l~~~~~dg~i~vw~~------~~~---~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~--- 134 (814)
T 3mkq_A 68 NWIIVGSDDFRIRVFNY------NTG---EKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQ--- 134 (814)
T ss_dssp TEEEEEETTSEEEEEET------TTC---CEEEEEECCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEE---
T ss_pred CEEEEEeCCCeEEEEEC------CCC---cEEEEEecCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEE---
Confidence 79999999999999999 556 78888999999999999999 889999999999999999987632211
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECC--CCCcEEEEEeCCCCC
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNP--DVATQLVVASDEDSS 242 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp--~g~~~l~~~s~d~~~ 242 (719)
....|...|.+++|++++..+|++++.||.|++||+++++....+...+...+.+++|++ ++ .++++++.++
T Consensus 135 ---~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg-- 208 (814)
T 3mkq_A 135 ---TFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDK-PYMITASDDL-- 208 (814)
T ss_dssp ---EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTC-CEEEEECTTS--
T ss_pred ---EEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCC-CEEEEEeCCC--
Confidence 123477799999999943469999999999999999998888887755668999999999 76 5788888887
Q ss_pred CcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCE
Q 046451 243 PALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGV 322 (719)
Q Consensus 243 ~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~ 322 (719)
.|++||+++. ..+..+.+|...|.+++|++ ++.+|++++.||.|++||+.+++.+..+..|...+.+++|++++..+
T Consensus 209 -~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 209 -TIKIWDYQTK-SCVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp -EEEEEETTTT-EEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGG
T ss_pred -EEEEEECCCC-cEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCce
Confidence 9999999875 66788899999999999999 89999999999999999999999999999999999999999998655
Q ss_pred EEEEeCCCcEEEEeCCCCcccc----------cCCCCC----------------CCCCc------cCcceecCCCceeee
Q 046451 323 ISASSFDGKIGIYNIEGCSRYG----------VGDSNF----------------SAAPL------RAPKWYKRPAGASFG 370 (719)
Q Consensus 323 las~s~Dg~I~iwd~~~~~~~~----------~~~~~~----------------~~~~~------~~p~w~~~~~~~s~s 370 (719)
+++++.|+.+.+|++....... .+.... ..... ....-...+..++|+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 365 (814)
T 3mkq_A 286 YIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHS 365 (814)
T ss_dssp EEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEEC
T ss_pred EEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEEC
Confidence 4445558889999987643221 000000 00000 000001123567888
Q ss_pred eCCcEEEEccCCCCCccc----cccccccceeeccCCCCCC
Q 046451 371 FGGKLVSFHPKSSAGHTS----ENSQHAPVHGVDQSKYGMV 407 (719)
Q Consensus 371 ~~Gklv~~~~~~~~~~~~----~~~~~~~v~~v~~s~~~~~ 407 (719)
++|++++...++.-..++ ...+.+.|.++++|||+..
T Consensus 366 pdg~~la~~~~~~~~i~~~~~~~~~~~~~i~~~~~spdg~~ 406 (814)
T 3mkq_A 366 PNGRFVTVVGDGEYVIYTALAWRNKAFGKCQDFVWGPDSNS 406 (814)
T ss_dssp TTSSEEEEEETTEEEEEETTTTEEEEEEECSEEEECTTSSC
T ss_pred CCCCEEEEecCCEEEEEECccccccCCCceEEEEEeCCCCe
Confidence 888877776643332222 3445677888999998876
No 46
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-34 Score=311.66 Aligned_cols=291 Identities=12% Similarity=0.135 Sum_probs=221.5
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
.+.|++++|+|||++||+|+.||.| +|||+..+... .......|...|++++|++++ ++
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i----------~iw~~~~~~~~---~~~~~~~h~~~v~~~~~s~~~--------~~ 69 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQV----------ELYEQDGNGWK---HARTFSDHDKIVTCVDWAPKS--------NR 69 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCB----------CEEEEETTEEE---ECCCBCCCSSCEEEEEECTTT--------CC
T ss_pred CCcEEEEEECCCCCEEEEecCCCEE----------EEEEccCCceE---EEEEEecCCceEEEEEEeCCC--------CE
Confidence 4689999999999999999888876 78998854201 112234689999999999998 79
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCcc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~ 166 (719)
|++++.||.|+|||+.. +........+..|...|.+++|++ ++++|++++.|+.|++||+++.+.......+.
T Consensus 70 l~s~s~d~~v~vwd~~~------~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 142 (377)
T 3dwl_C 70 IVTCSQDRNAYVYEKRP------DGTWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLK 142 (377)
T ss_dssp EEEEETTSSEEEC------------CCCCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEEC
T ss_pred EEEEeCCCeEEEEEcCC------CCceeeeeEecccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEee
Confidence 99999999999999943 311246677888999999999999 88999999999999999999876422211122
Q ss_pred CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC------------------CceeEEecCCCCCceeEEEECCC
Q 046451 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK------------------QKPVISFSESIKRRCSVLQWNPD 228 (719)
Q Consensus 167 ~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~------------------~~~~~~~~~~~~~~i~~l~~sp~ 228 (719)
..|...|.+++|++++ .+|++++.|+.|++||++. ++.+..+ .|...|.+++|+++
T Consensus 143 ---~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~ 216 (377)
T 3dwl_C 143 ---RPLRSTILSLDWHPNN-VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPS 216 (377)
T ss_dssp ---SSCCSCEEEEEECTTS-SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTT
T ss_pred ---cccCCCeEEEEEcCCC-CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCC
Confidence 2278899999999997 6999999999999999953 3444455 58899999999999
Q ss_pred CCcEEEEEeCCCCCCcEEEEecCCCCCc---eEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe-------
Q 046451 229 VATQLVVASDEDSSPALRLWDMRNTMSP---VKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE------- 298 (719)
Q Consensus 229 g~~~l~~~s~d~~~~~I~lwDl~~~~~~---~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~------- 298 (719)
+. +|++++.|+ .|++||+++.... +..+.+|...|.+++|++ ++++|++++.|+.+ +|+.....
T Consensus 217 ~~-~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~ 290 (377)
T 3dwl_C 217 GN-ALAYAGHDS---SVTIAYPSAPEQPPRALITVKLSQLPLRSLLWAN-ESAIVAAGYNYSPI-LLQGNESGWAHTRDL 290 (377)
T ss_dssp SS-CEEEEETTT---EEC-CEECSTTSCEEECCCEECSSSCEEEEEEEE-TTEEEEEESSSSEE-EECCCC---CCSBCC
T ss_pred CC-EEEEEeCCC---cEEEEECCCCCCcceeeEeecCCCCceEEEEEcC-CCCEEEEEcCCcEE-EEEeCCCceEEEeee
Confidence 84 788899888 9999999876431 677889999999999999 88999888766655 66654211
Q ss_pred --------------------------------EEEE-------------ecCCCCCeEEeEEcCCCCC---EEEEEeCCC
Q 046451 299 --------------------------------IVSE-------------LPAGTNWNFDIHWYPKIPG---VISASSFDG 330 (719)
Q Consensus 299 --------------------------------~~~~-------------l~~h~~~v~~l~~spdg~~---~las~s~Dg 330 (719)
.... ...|.+.|+++.+.+.... .|+|++.||
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg 370 (377)
T 3dwl_C 291 DAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDG 370 (377)
T ss_dssp CSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTS
T ss_pred cccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCC
Confidence 0000 0128899999998765534 699999999
Q ss_pred cEEEEeC
Q 046451 331 KIGIYNI 337 (719)
Q Consensus 331 ~I~iwd~ 337 (719)
.|+|||+
T Consensus 371 ~i~iWdl 377 (377)
T 3dwl_C 371 RVVLWTL 377 (377)
T ss_dssp EEEEECC
T ss_pred cEEEecC
Confidence 9999986
No 47
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-34 Score=323.11 Aligned_cols=318 Identities=14% Similarity=0.118 Sum_probs=230.5
Q ss_pred ccCccceEEEcCCC---------CeEEEeeccce---------eecccCCCceEEEEEeeccCCcccceeecccCCCCCc
Q 046451 6 GINRSASVAFAPDA---------PYMAAGTMAGA---------VDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERF 67 (719)
Q Consensus 6 ~~~~V~~vafSpdg---------~~Latgs~dG~---------v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V 67 (719)
....|.+|+|+|++ ++||+|+.++. +....+.++.|+||+++.+...... ......|...|
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~-~~~l~~~~~~V 210 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVK-VQTIVHSFGEV 210 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEE-EEEEEECCCSE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceE-EEEEEecCCcE
Confidence 45789999999987 79999886532 2234467889999999865432211 11123467889
Q ss_pred eeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCC--CCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC
Q 046451 68 NRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGE--TGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD 145 (719)
Q Consensus 68 ~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~--~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d 145 (719)
++++|+|++... ...++||+++.||+|+|||+........ .........+.+|...|++++|++ + .+|++|+.|
T Consensus 211 ~~v~wsp~~~~~--~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~-~~lasgs~D 286 (524)
T 2j04_B 211 WDLKWHEGCHAP--HLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-P-TTVVCGFKN 286 (524)
T ss_dssp EEEEECSSCCCS--SSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-S-SEEEEEETT
T ss_pred EEEEECCCCCCC--CCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-C-CeEEEEeCC
Confidence 999999973100 0016999999999999999953211000 000123356788999999999997 4 589999999
Q ss_pred CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEE--EecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCC--Ccee
Q 046451 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFV--SWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIK--RRCS 221 (719)
Q Consensus 146 g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l--~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~--~~i~ 221 (719)
|+|++||+++...... ....|...|++| .|++++.++|++++.|++|+|||+++++++..+. .|. ..|.
T Consensus 287 gtV~lWD~~~~~~~~~------~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~-~~~~~~~v~ 359 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSF------YDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTV-SRFRGSNLV 359 (524)
T ss_dssp SEEEEEETTBCSSCSE------EEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEE-EECSCCSCC
T ss_pred CEEEEEECCCCCCceE------EeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccc-cccccCccc
Confidence 9999999987643221 123578899999 5677654699999999999999999988776665 333 3588
Q ss_pred EEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC-----
Q 046451 222 VLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS----- 296 (719)
Q Consensus 222 ~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~----- 296 (719)
+++|+|++. .|++++.|+ +|++||+++. .++..+.+|...|++|+|+| ++.+|++|+.||+|+|||+..
T Consensus 360 ~v~fsp~~~-~l~s~~~d~---tv~lwd~~~~-~~~~~l~gH~~~V~sva~Sp-~g~~l~Sgs~Dgtv~lwd~~~~~~~~ 433 (524)
T 2j04_B 360 PVVYCPQIY-SYIYSDGAS---SLRAVPSRAA-FAVHPLVSRETTITAIGVSR-LHPMVLAGSADGSLIITNAARRLLHG 433 (524)
T ss_dssp CEEEETTTT-EEEEECSSS---EEEEEETTCT-TCCEEEEECSSCEEEEECCS-SCCBCEEEETTTEEECCBSCSSTTTC
T ss_pred ceEeCCCcC-eEEEeCCCC---cEEEEECccc-ccceeeecCCCceEEEEeCC-CCCeEEEEECCCEEEEEechHhhccc
Confidence 999999985 688888887 8999999875 55677889999999999999 899999999999999997531
Q ss_pred ---------------------------------------CeEEEEecCCCCCeEEeEEcCCCC--CEEEEEeCCCcEEEE
Q 046451 297 ---------------------------------------GEIVSELPAGTNWNFDIHWYPKIP--GVISASSFDGKIGIY 335 (719)
Q Consensus 297 ---------------------------------------~~~~~~l~~h~~~v~~l~~spdg~--~~las~s~Dg~I~iw 335 (719)
+..+..+.+|...|++|+|+|++. .+||+|+.||.|+||
T Consensus 434 ~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw 513 (524)
T 2j04_B 434 IKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLE 513 (524)
T ss_dssp C------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEE
T ss_pred cccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEE
Confidence 112233446788999999999962 599999999999999
Q ss_pred eCCCCc
Q 046451 336 NIEGCS 341 (719)
Q Consensus 336 d~~~~~ 341 (719)
++....
T Consensus 514 ~l~~~~ 519 (524)
T 2j04_B 514 YLSLEH 519 (524)
T ss_dssp ECSCC-
T ss_pred Eccccc
Confidence 988754
No 48
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-34 Score=340.27 Aligned_cols=209 Identities=13% Similarity=0.210 Sum_probs=168.7
Q ss_pred cccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCC
Q 046451 3 CIKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDF 82 (719)
Q Consensus 3 ~l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~ 82 (719)
+..|.+.|++++|+|||++||+|+.||.| +||+....+ ......|...|++++|++ +
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I----------~lw~~~~~~------~~~~~~~~~~V~~l~fsp-g------ 69 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEV----------HIYGQQQVE------VVIKLEDRSAIKEMRFVK-G------ 69 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEE----------EEECSTTCE------EEEECSSCCCEEEEEEET-T------
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEE----------EEEeCCCcE------EEEEcCCCCCEEEEEEcC-C------
Confidence 34567889999999999999999998877 778765321 122244788999999999 6
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCcc
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF 162 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~ 162 (719)
++|++++.|+.|+|||+ .++ +.+..+. |.+.|++++|++ ++++|++|+.||.|++||+.+.... .+
T Consensus 70 --~~L~S~s~D~~v~lWd~------~~~---~~~~~~~-~~~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~~-~~ 135 (902)
T 2oaj_A 70 --IYLVVINAKDTVYVLSL------YSQ---KVLTTVF-VPGKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQLS-SF 135 (902)
T ss_dssp --TEEEEEETTCEEEEEET------TTC---SEEEEEE-CSSCEEEEECCT-TCSEEEEEETTSCEEEEETTTTEEE-EE
T ss_pred --CEEEEEECcCeEEEEEC------CCC---cEEEEEc-CCCCEEEEEECC-CCCEEEEEcCCCcEEEEECCCCccc-cc
Confidence 68999999999999999 444 6666665 778999999999 8899999999999999999876532 10
Q ss_pred C--Ccc---CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCC-----------------CCCce
Q 046451 163 P--PLR---GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSES-----------------IKRRC 220 (719)
Q Consensus 163 ~--~l~---~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~-----------------~~~~i 220 (719)
. .+. ....+|.+.|++++|+|++..+|++++.||.| +||+++++.+..+... |...|
T Consensus 136 ~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V 214 (902)
T 2oaj_A 136 KLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKV 214 (902)
T ss_dssp EECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCE
T ss_pred eeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCe
Confidence 0 000 12346888999999999765689999999999 9999999888877621 24779
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCC
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNT 253 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~ 253 (719)
.+++|+|+| .+|++++.|+ +|++||++++
T Consensus 215 ~~v~fspdg-~~lasgs~Dg---~i~lWd~~~g 243 (902)
T 2oaj_A 215 IQSLYHPNS-LHIITIHEDN---SLVFWDANSG 243 (902)
T ss_dssp EEEEECTTS-SEEEEEETTC---CEEEEETTTC
T ss_pred EEEEEcCCC-CEEEEEECCC---eEEEEECCCC
Confidence 999999998 5899999998 9999999875
No 49
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6e-33 Score=291.04 Aligned_cols=253 Identities=21% Similarity=0.342 Sum_probs=219.0
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
..+|...|++++|++++ ++|++|+.||.|+||++ .++ +....+.+|...|.+++|++ ++++|
T Consensus 19 ~~gh~~~v~~~~~s~~~--------~~l~s~~~dg~i~iw~~------~~~---~~~~~~~~h~~~v~~~~~~~-~~~~l 80 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNG--------EWLASSSADKLIKIWGA------YDG---KFEKTISGHKLGISDVAWSS-DSNLL 80 (312)
T ss_dssp ECCCSSCEEEEEECTTS--------SEEEEEETTSCEEEEET------TTC---CEEEEECCCSSCEEEEEECT-TSSEE
T ss_pred EcccCCcEEEEEECCCC--------CEEEEeeCCCeEEEEeC------CCc---ccchhhccCCCceEEEEEcC-CCCEE
Confidence 35689999999999998 79999999999999998 455 77788899999999999999 88999
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR 219 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~ 219 (719)
++++.|+.|++||+.+++.... + ..|...|.+++|++++ .+|++++.||.|++||+++++.+..+. .|...
T Consensus 81 ~s~~~d~~i~vwd~~~~~~~~~---~----~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~ 151 (312)
T 4ery_A 81 VSASDDKTLKIWDVSSGKCLKT---L----KGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDP 151 (312)
T ss_dssp EEEETTSEEEEEETTTCCEEEE---E----ECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCCEEEEEC-CCSSC
T ss_pred EEECCCCEEEEEECCCCcEEEE---E----cCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCEEEEEec-CCCCc
Confidence 9999999999999998775544 2 3477899999999997 699999999999999999999988888 78899
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEe-eCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF-VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~-~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
|.+++|++++ .+|++++.|+ .|++||+++. +.+..+ ..+...+..++|++ ++++|++++.|+.|++||+++++
T Consensus 152 v~~~~~~~~~-~~l~~~~~d~---~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 152 VSAVHFNRDG-SLIVSSSYDG---LCRIWDTASG-QCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGK 225 (312)
T ss_dssp EEEEEECTTS-SEEEEEETTS---CEEEEETTTC-CEEEEECCSSCCCEEEEEECT-TSSEEEEEETTTEEEEEETTTTE
T ss_pred EEEEEEcCCC-CEEEEEeCCC---cEEEEECCCC-ceeeEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCc
Confidence 9999999998 5789999988 8999999876 444444 45667899999999 89999999999999999999999
Q ss_pred EEEEecCCCCCeEE--eEEcCCCCCEEEEEeCCCcEEEEeCCCCccccc
Q 046451 299 IVSELPAGTNWNFD--IHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345 (719)
Q Consensus 299 ~~~~l~~h~~~v~~--l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~ 345 (719)
.+..+.+|...+.. ..|+..+..+|++++.||.|++||+.+++.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 274 (312)
T 4ery_A 226 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 274 (312)
T ss_dssp EEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEE
T ss_pred EEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhh
Confidence 99999888764433 345544448999999999999999999887653
No 50
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-33 Score=307.09 Aligned_cols=282 Identities=16% Similarity=0.261 Sum_probs=241.7
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
+.+.|.+++|+||+++||+|+.||.| ++||.. +.. +.....|...|.+++|++++ .
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i----------~i~~~~-~~~-----~~~~~~~~~~v~~~~~~~~~--------~ 162 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGEL----------RLWNKT-GAL-----LNVLNFHRAPIVSVKWNKDG--------T 162 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCE----------EEEETT-SCE-----EEEECCCCSCEEEEEECTTS--------S
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeE----------EEEeCC-CCe-----eeeccCCCccEEEEEECCCC--------C
Confidence 45689999999999999999988876 778722 111 12234588999999999998 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCC---------------EEEEEEeCCCCCEEEEEeCCCcEEE
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGP---------------VRGLEFNSFTPNLLASGADDGEICI 150 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~---------------V~~l~fsp~~~~~lasgs~dg~I~i 150 (719)
+|++++.||.|++||+ .++ ..+..+..+... +.+++|++ + ..+++++.||.|++
T Consensus 163 ~l~~~~~d~~i~iwd~------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~i~~ 231 (425)
T 1r5m_A 163 HIISMDVENVTILWNV------ISG---TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD-D-DKFVIPGPKGAIFV 231 (425)
T ss_dssp EEEEEETTCCEEEEET------TTT---EEEEEECCC---------------CCCBSCCEEEE-T-TEEEEECGGGCEEE
T ss_pred EEEEEecCCeEEEEEC------CCC---cEEEEeeccccCccceeeccccCCcceeeEEEEcC-C-CEEEEEcCCCeEEE
Confidence 9999999999999999 445 666777777666 99999998 4 67999999999999
Q ss_pred EcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCC
Q 046451 151 WDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVA 230 (719)
Q Consensus 151 wdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~ 230 (719)
||+.+.+....+ ..|...|.+++|++++ .+|++++.||.|++||+++++.+..+. .+...|.+++|++++
T Consensus 232 ~d~~~~~~~~~~-------~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~- 301 (425)
T 1r5m_A 232 YQITEKTPTGKL-------IGHHGPISVLEFNDTN-KLLLSASDDGTLRIWHGGNGNSQNCFY-GHSQSIVSASWVGDD- 301 (425)
T ss_dssp EETTCSSCSEEE-------CCCSSCEEEEEEETTT-TEEEEEETTSCEEEECSSSBSCSEEEC-CCSSCEEEEEEETTT-
T ss_pred EEcCCCceeeee-------ccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCccceEec-CCCccEEEEEECCCC-
Confidence 999987655442 3477799999999997 599999999999999999999888887 789999999999997
Q ss_pred cEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe------------
Q 046451 231 TQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE------------ 298 (719)
Q Consensus 231 ~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~------------ 298 (719)
++++++.++ .|++||+++. +.+..+..|...|.+++|++ ++++|++++.||.|+|||+.+++
T Consensus 302 -~l~~~~~d~---~i~i~d~~~~-~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~ 375 (425)
T 1r5m_A 302 -KVISCSMDG---SVRLWSLKQN-TLLALSIVDGVPIFAGRISQ-DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDG 375 (425)
T ss_dssp -EEEEEETTS---EEEEEETTTT-EEEEEEECTTCCEEEEEECT-TSSEEEEEETTSCEEEEECHHHHC-----------
T ss_pred -EEEEEeCCC---cEEEEECCCC-cEeEecccCCccEEEEEEcC-CCCEEEEEECCCeEEEEECCCCccceeeeeccccc
Confidence 788999888 9999999875 67788889999999999999 89999999999999999999888
Q ss_pred --------EEEEecCCCC--CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 299 --------IVSELPAGTN--WNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 299 --------~~~~l~~h~~--~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
.+..+..|.. .|.+++|++++ .+|++++.||.|+|||+++
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 376 ILNPLPIPLYASYQSSQDNDYIFDLSWNCAG-NKISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp ---CEECCEEEEECCTTCCCCEEEEEECTTS-SEEEEEESSSCCEEEECCC
T ss_pred ccCcccchhhhhhcCcccCCceEEEEccCCC-ceEEEEecCceEEEEeecC
Confidence 8899999976 89999999999 7999999999999999863
No 51
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.8e-34 Score=310.40 Aligned_cols=300 Identities=11% Similarity=0.072 Sum_probs=222.8
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCccccee-----ecccCCCCCceeeeecCCCCCCCCCc
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLL-----VGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
.|++++|+|||++||+|+.+..- ..-++.|++|+++.........+ .....+...|.+++|+.+
T Consensus 16 PV~sv~fs~dg~~l~sGGg~~~~---sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~-------- 84 (365)
T 4h5i_A 16 PAYGAKFLNNDTLLVAGGGGEGN---NGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKG-------- 84 (365)
T ss_dssp CEEEEEEEETTEEEEEEECCSSS---SSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETT--------
T ss_pred CEEEEEEeCCCcEEEEECCCccc---cCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCC--------
Confidence 59999999999999998754321 01255789999986654332111 223457788889888654
Q ss_pred cceEEE-----------EcCCCcEEEEcCCccccCCCCCCCCcee-----eeccccCCEEEEEEeCCCCCEEEEE--eCC
Q 046451 84 LGLVAG-----------GLVDGSIDIWNPLSLISSGETGGNPLIA-----HLSRHKGPVRGLEFNSFTPNLLASG--ADD 145 (719)
Q Consensus 84 ~~~las-----------gs~dg~I~lwd~~~~~~~~~~~~~~~~~-----~l~~h~~~V~~l~fsp~~~~~lasg--s~d 145 (719)
.+++ ++.|+.|++|++...... . .... ....+...+.+++|+| |+++|+++ +.|
T Consensus 85 --~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~v~fSp-Dg~~la~as~~~d 156 (365)
T 4h5i_A 85 --IILVGCNENSTKITQGKGNKHLRKFKYDKVNDQ--L---EFLTSVDFDASTNADDYTKLVYISR-EGTVAAIASSKVP 156 (365)
T ss_dssp --EEEEECCCCHHHHHHTSCCCCEEEEEEETTTTE--E---EEEEEECSSCCCCTTCCEEEEEECT-TSSCEEEEESCSS
T ss_pred --EEEEEECCCccEEEEecCCCcEEEEEecCCCce--E---EEeeeeceeecCCcccCEEEEEEcC-CCCEEEEEECCCC
Confidence 4444 456788999997432110 0 1111 1223456789999999 78887654 478
Q ss_pred CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEE-ecCCCCCceeEEE
Q 046451 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS-FSESIKRRCSVLQ 224 (719)
Q Consensus 146 g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~-~~~~~~~~i~~l~ 224 (719)
++|+|||+.+.+....+ .|...|.+++|+++| .+|++++.+ .+++|+..+++.+.. ....|...|.+++
T Consensus 157 ~~i~iwd~~~~~~~~~~--------~~~~~V~~v~fspdg-~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 226 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEI--------ETRGEVKDLHFSTDG-KVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKIN 226 (365)
T ss_dssp CEEEEEETTTTEEEEEE--------ECSSCCCEEEECTTS-SEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEE
T ss_pred CEEEEeECCCCcEEEEe--------CCCCceEEEEEccCC-ceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEE
Confidence 99999999987765442 255689999999998 588888755 567777777766543 3336788999999
Q ss_pred ECCCCCcEEEEEeCCCC-CCcEEEEecCCCCC---ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEE
Q 046451 225 WNPDVATQLVVASDEDS-SPALRLWDMRNTMS---PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV 300 (719)
Q Consensus 225 ~sp~g~~~l~~~s~d~~-~~~I~lwDl~~~~~---~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~ 300 (719)
|++++. .+++++.++. ...+++||+..... ....+.+|...|++++|+| ++++|++|+.|+.|+|||+++++++
T Consensus 227 fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp-dg~~lasgs~D~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 227 FIADDT-VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM-KGELAVLASNDNSIALVKLKDLSMS 304 (365)
T ss_dssp EEETTE-EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEE
T ss_pred EcCCCC-EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC-CCCceEEEcCCCEEEEEECCCCcEE
Confidence 999985 6666665542 22578888865432 2346778999999999999 9999999999999999999999999
Q ss_pred EEe-cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 046451 301 SEL-PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 301 ~~l-~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~ 340 (719)
..+ .+|...|++|+|+||| .+||++|.|++|+|||+...
T Consensus 305 ~~~~~gH~~~V~~v~fSpdg-~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 305 KIFKQAHSFAITEVTISPDS-TYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEETTSSSSCEEEEEECTTS-CEEEEEETTSEEEEEECCTT
T ss_pred EEecCcccCCEEEEEECCCC-CEEEEEeCCCeEEEEEcCCC
Confidence 875 7899999999999999 89999999999999999643
No 52
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=299.79 Aligned_cols=293 Identities=20% Similarity=0.336 Sum_probs=227.7
Q ss_pred cCCCC-CceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCc---eeeeccccCCEEEEEEeCCCC
Q 046451 61 SPSSE-RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPL---IAHLSRHKGPVRGLEFNSFTP 136 (719)
Q Consensus 61 ~~~~~-~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~---~~~l~~h~~~V~~l~fsp~~~ 136 (719)
.+|.. .|++++|++++ .+|++|+.|+.|+|||+.. + .. .....+|...|.+++|++ ++
T Consensus 12 ~~h~~~~v~~l~~sp~g--------~~las~~~D~~i~iw~~~~------~---~~~~~~~~~~~h~~~v~~~~~sp-~g 73 (345)
T 3fm0_A 12 PAHPDSRCWFLAWNPAG--------TLLASCGGDRRIRIWGTEG------D---SWICKSVLSEGHQRTVRKVAWSP-CG 73 (345)
T ss_dssp CCSTTSCEEEEEECTTS--------SCEEEEETTSCEEEEEEET------T---EEEEEEEECSSCSSCEEEEEECT-TS
T ss_pred cCCCCCcEEEEEECCCC--------CEEEEEcCCCeEEEEEcCC------C---cceeeeeeccccCCcEEEEEECC-CC
Confidence 34666 89999999998 7999999999999999832 2 21 123367999999999999 88
Q ss_pred CEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc---eeEEec
Q 046451 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK---PVISFS 213 (719)
Q Consensus 137 ~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~---~~~~~~ 213 (719)
++|++|+.|++|+|||+...... ......+|...|.+++|++++ ++|++++.|++|++||++++. .+..+.
T Consensus 74 ~~l~s~s~D~~v~iw~~~~~~~~-----~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~ 147 (345)
T 3fm0_A 74 NYLASASFDATTCIWKKNQDDFE-----CVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEYECVSVLN 147 (345)
T ss_dssp SEEEEEETTSCEEEEEECCC-EE-----EEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSCEEEEEEEC
T ss_pred CEEEEEECCCcEEEEEccCCCeE-----EEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCCeEEEEEec
Confidence 99999999999999998765421 111224588899999999997 699999999999999998764 344555
Q ss_pred CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC-CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEE
Q 046451 214 ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM-SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292 (719)
Q Consensus 214 ~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~-~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iw 292 (719)
.|...|.+++|++++ .+|++++.|+ +|++||++... .++..+.+|...|.+++|+| ++++|++++.|++|+||
T Consensus 148 -~h~~~v~~~~~~p~~-~~l~s~s~d~---~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp-~g~~l~s~s~D~~v~iW 221 (345)
T 3fm0_A 148 -SHTQDVKHVVWHPSQ-ELLASASYDD---TVKLYREEEDDWVCCATLEGHESTVWSLAFDP-SGQRLASCSDDRTVRIW 221 (345)
T ss_dssp -CCCSCEEEEEECSSS-SCEEEEETTS---CEEEEEEETTEEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred -CcCCCeEEEEECCCC-CEEEEEeCCC---cEEEEEecCCCEEEEEEecCCCCceEEEEECC-CCCEEEEEeCCCeEEEe
Confidence 789999999999998 5799999998 89999997643 24567889999999999999 99999999999999999
Q ss_pred ECCC---------------CeEEEEecC-CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCC-------CC
Q 046451 293 DTVS---------------GEIVSELPA-GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGD-------SN 349 (719)
Q Consensus 293 d~~~---------------~~~~~~l~~-h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~-------~~ 349 (719)
|... .+++..+.+ |...|++++|++++ .+|++++.|+.|++|++.......... ..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~ 300 (345)
T 3fm0_A 222 RQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT-GALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQ 300 (345)
T ss_dssp EEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTT-CCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETT
T ss_pred ccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCC-CEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecc
Confidence 9632 134555555 88899999999999 789999999999999998654221000 00
Q ss_pred CCCCCccCcceecCC--CceeeeeCCcEEEEccCCCC
Q 046451 350 FSAAPLRAPKWYKRP--AGASFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 350 ~~~~~~~~p~w~~~~--~~~s~s~~Gklv~~~~~~~~ 384 (719)
-....+....|.+.. ..++.+.||.+..|......
T Consensus 301 ~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 301 AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp SSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC--
T ss_pred cccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCC
Confidence 112234556676653 35667778888888766553
No 53
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=7.2e-33 Score=303.60 Aligned_cols=286 Identities=17% Similarity=0.305 Sum_probs=235.6
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEE
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVA 88 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~la 88 (719)
.++.|+||++ ++||+|. |+.| +|||+.+++.... ....+|...|++|+|+++| .+|+
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV----------~lWd~~tg~~~~~---~~~~~~~~~V~sv~fspdg--------~~la 163 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSV----------YLWSASSGDILQL---LQMEQPGEYISSVAWIKEG--------NYLA 163 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEE----------EEEETTTCCEEEE---EECCSTTCCEEEEEECTTS--------SEEE
T ss_pred cceeEEECCC-CEEEEEe-CCEE----------EEEECCCCCEEEE---EEecCCCCcEEEEEECCCC--------CEEE
Confidence 4678999975 5888874 5554 8999887654332 3335678899999999998 7999
Q ss_pred EEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCC
Q 046451 89 GGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGN 168 (719)
Q Consensus 89 sgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~ 168 (719)
+|+.||.|+|||+ .++ +.+..+.+|...+.+++|+ +.+|++|+.|+.+++||......... .
T Consensus 164 sgs~Dg~v~iWd~------~~~---~~~~~~~~h~~~v~~~s~~---~~~l~sgs~d~~i~~~d~~~~~~~~~------~ 225 (420)
T 4gga_A 164 VGTSSAEVQLWDV------QQQ---KRLRNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVA------T 225 (420)
T ss_dssp EEETTSCEEEEET------TTT---EEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEE------E
T ss_pred EEECCCeEEEEEc------CCC---cEEEEEeCCCCceEEEeeC---CCEEEEEeCCCceeEeeecccceeeE------E
Confidence 9999999999999 556 7888999999999999985 57999999999999999887554321 1
Q ss_pred CCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce----eEEecCCCCCceeEEEECCCCCcEEEEEe--CCCCC
Q 046451 169 GSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP----VISFSESIKRRCSVLQWNPDVATQLVVAS--DEDSS 242 (719)
Q Consensus 169 ~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~----~~~~~~~~~~~i~~l~~sp~g~~~l~~~s--~d~~~ 242 (719)
...|...+..+.|++++ .++++++.|+.|++||+.+++. +..+. .+...|.+++|++++..++++++ .|+
T Consensus 226 ~~~h~~~~~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~-~~~~~V~~~~~~p~~~~~la~~~gs~D~-- 301 (420)
T 4gga_A 226 LSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFT-QHQGAVKAVAWCPWQSNVLATGGGTSDR-- 301 (420)
T ss_dssp EECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCCSSCSCCSEEEC-CCSSCEEEEEECTTCTTEEEEEECTTTC--
T ss_pred ecccccceeeeeecCCC-CeeeeeeccccceEEeeccccccceeeeeec-ccCCceeeeeeCCCcccEEEEEeecCCC--
Confidence 23578899999999997 5999999999999999987653 33444 68899999999999888887754 455
Q ss_pred CcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe--CCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCC
Q 046451 243 PALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA--KDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIP 320 (719)
Q Consensus 243 ~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs--~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~ 320 (719)
+|++||++++ ..+..+..| ..+.++.|++ +++.|++++ .|+.|+|||+.+++++.++.+|.+.|++++|+|||
T Consensus 302 -~I~iwd~~t~-~~~~~~~~~-~~v~~~~~~~-~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg- 376 (420)
T 4gga_A 302 -HIRIWNVCSG-ACLSAVDAH-SQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDG- 376 (420)
T ss_dssp -EEEEEETTTT-EEEEEEECS-SCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-
T ss_pred -EEEEEeCCcc-ccceeeccc-cceeeeeecC-CCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC-
Confidence 9999999875 556666544 5788999999 777777665 79999999999999999999999999999999999
Q ss_pred CEEEEEeCCCcEEEEeCCCCcccc
Q 046451 321 GVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 321 ~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
.+|+||+.|++|+|||+.......
T Consensus 377 ~~l~S~s~D~tvriWdv~~~~~~~ 400 (420)
T 4gga_A 377 ATVASAAADETLRLWRCFELDPAR 400 (420)
T ss_dssp SCEEEEETTTEEEEECCSCSSCC-
T ss_pred CEEEEEecCCeEEEEECCCCCccc
Confidence 799999999999999998765443
No 54
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=5.2e-33 Score=305.79 Aligned_cols=318 Identities=20% Similarity=0.332 Sum_probs=250.7
Q ss_pred ccceEEEcCCC----------CeEEEeeccceeecccCCCceEEEEEeecc----------------------CCcccce
Q 046451 9 RSASVAFAPDA----------PYMAAGTMAGAVDLSFSSSANLEIFKLDFQ----------------------SEDRDLL 56 (719)
Q Consensus 9 ~V~~vafSpdg----------~~Latgs~dG~v~v~~s~~~~i~iwd~~~~----------------------~~~~~~~ 56 (719)
...++.|.|+. .+|++|+... ...+.|.|++++.. .....+.
T Consensus 47 p~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~------~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 120 (430)
T 2xyi_A 47 PSLTAQWLPDVTKQDGKDYSVHRLILGTHTS------DEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIE 120 (430)
T ss_dssp CCSCEEECSCCEECTTCSCEEEEEEEECCCS------SSCEEEEEEEEEEC--------------------------CEE
T ss_pred CceEEEECcccccccCCCcceEEEEEEEcCC------CCCCEEEEEEEECCCCccccccccccccccccccccCCCCceE
Confidence 45789999976 4688887643 13456677765421 1112344
Q ss_pred eecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCC-CCCCCceeeeccccCCEEEEEEeCCC
Q 046451 57 LVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGE-TGGNPLIAHLSRHKGPVRGLEFNSFT 135 (719)
Q Consensus 57 ~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~-~~~~~~~~~l~~h~~~V~~l~fsp~~ 135 (719)
......|.+.|++++|++++. .+|++++.||.|+|||+........ ......+..+.+|...|++++|++.+
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~-------~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~ 193 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNA-------CVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNL 193 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEE-------EEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTS
T ss_pred EEEEEcCCCcEEEEEECCCCC-------cEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCC
Confidence 455677999999999999732 7999999999999999954211100 01126677888999999999999944
Q ss_pred CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC---ceeEEe
Q 046451 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISF 212 (719)
Q Consensus 136 ~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~---~~~~~~ 212 (719)
..+|++|+.||.|+|||+.+................|...|.+++|++++..+|++++.||.|++||++++ +.+..+
T Consensus 194 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~ 273 (430)
T 2xyi_A 194 NGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV 273 (430)
T ss_dssp TTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE
T ss_pred CCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe
Confidence 44999999999999999987543211100111223578899999999966789999999999999999987 566666
Q ss_pred cCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEE
Q 046451 213 SESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292 (719)
Q Consensus 213 ~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iw 292 (719)
. .|...|.+++|++++..+|++++.|+ .|++||+++...++..+..|...|.+++|+|++..+|++++.||.|+||
T Consensus 274 ~-~~~~~v~~i~~~p~~~~~l~tg~~dg---~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iw 349 (430)
T 2xyi_A 274 D-AHTAEVNCLSFNPYSEFILATGSADK---TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 349 (430)
T ss_dssp E-CCSSCEEEEEECSSCTTEEEEEETTS---EEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEE
T ss_pred e-cCCCCeEEEEeCCCCCCEEEEEeCCC---eEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEE
Confidence 6 78999999999999988899999998 9999999987778899999999999999999444679999999999999
Q ss_pred ECCC--------------CeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 293 DTVS--------------GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 293 d~~~--------------~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
|+.. .+.+..+.+|...|++++|+++++.+|++++.||.|+||++......
T Consensus 350 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 350 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYN 414 (430)
T ss_dssp EGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHHHC
T ss_pred eCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccccc
Confidence 9986 36788888999999999999999669999999999999999876543
No 55
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.9e-33 Score=303.76 Aligned_cols=284 Identities=18% Similarity=0.332 Sum_probs=232.7
Q ss_pred cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 10 SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 10 V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
+.+++|++ ..|++++.||.| ++||+..+.... .....|...|++++|++++ .+|++
T Consensus 96 ~~~~~~s~--~~l~~~~~d~~v----------~lw~~~~~~~~~----~~~~~~~~~v~~v~~s~~~--------~~l~~ 151 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALERNV----------YVWNADSGSVSA----LAETDESTYVASVKWSHDG--------SFLSV 151 (401)
T ss_dssp CBCEEECT--TSEEEEEETTEE----------EEEETTTCCEEE----EEECCTTCCEEEEEECTTS--------SEEEE
T ss_pred EEEEeecC--CCEEEEECCCeE----------EEeeCCCCcEeE----eeecCCCCCEEEEEECCCC--------CEEEE
Confidence 44566664 567778777766 889887654332 2223478899999999998 79999
Q ss_pred EcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCC
Q 046451 90 GLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNG 169 (719)
Q Consensus 90 gs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~ 169 (719)
|+.||.|++||+ .++ +.+..+..|...|.+++|+ +++|++++.||.|++||++....... ..
T Consensus 152 ~~~dg~i~iwd~------~~~---~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~------~~ 213 (401)
T 4aez_A 152 GLGNGLVDIYDV------ESQ---TKLRTMAGHQARVGCLSWN---RHVLSSGSRSGAIHHHDVRIANHQIG------TL 213 (401)
T ss_dssp EETTSCEEEEET------TTC---CEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEE------EE
T ss_pred ECCCCeEEEEEC------cCC---eEEEEecCCCCceEEEEEC---CCEEEEEcCCCCEEEEecccCcceee------EE
Confidence 999999999999 455 7788889999999999994 47999999999999999985443211 12
Q ss_pred CCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEe--CCCCCCcEEE
Q 046451 170 SAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVAS--DEDSSPALRL 247 (719)
Q Consensus 170 ~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s--~d~~~~~I~l 247 (719)
..|...|.+++|++++ .+|++++.||.|++||+++++.+..+. .|...|.+++|++++..++++++ .|+ .|++
T Consensus 214 ~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~p~~~~ll~~~~gs~d~---~i~i 288 (401)
T 4aez_A 214 QGHSSEVCGLAWRSDG-LQLASGGNDNVVQIWDARSSIPKFTKT-NHNAAVKAVAWCPWQSNLLATGGGTMDK---QIHF 288 (401)
T ss_dssp ECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCSSEEEEEC-CCSSCCCEEEECTTSTTEEEEECCTTTC---EEEE
T ss_pred cCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEccCCCCCccEEec-CCcceEEEEEECCCCCCEEEEecCCCCC---EEEE
Confidence 3478899999999986 699999999999999999999988887 78999999999999888888876 566 8999
Q ss_pred EecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe--CCCcEEEEECCCCeEEE--EecCCCCCeEEeEEcCCCCCEE
Q 046451 248 WDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA--KDNRTICWDTVSGEIVS--ELPAGTNWNFDIHWYPKIPGVI 323 (719)
Q Consensus 248 wDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs--~Dg~I~iwd~~~~~~~~--~l~~h~~~v~~l~~spdg~~~l 323 (719)
||+++. +.+..+. +...|.+++|++ ++.+|++++ .||.|+|||+.+++... .+.+|...|.+++|++++ .+|
T Consensus 289 ~d~~~~-~~~~~~~-~~~~v~~~~~s~-~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg-~~l 364 (401)
T 4aez_A 289 WNAATG-ARVNTVD-AGSQVTSLIWSP-HSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDG-RIL 364 (401)
T ss_dssp EETTTC-CEEEEEE-CSSCEEEEEECS-SSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTS-SEE
T ss_pred EECCCC-CEEEEEe-CCCcEEEEEECC-CCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCC-CEE
Confidence 999875 5566665 667899999999 889888854 89999999999865544 467899999999999999 799
Q ss_pred EEEeCCCcEEEEeCCCCcccc
Q 046451 324 SASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 324 as~s~Dg~I~iwd~~~~~~~~ 344 (719)
++++.||.|+|||+.+++.+.
T Consensus 365 ~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 365 STAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp EEECTTSEEEEEECCC-----
T ss_pred EEEeCCCcEEEEECCCCcccc
Confidence 999999999999999988765
No 56
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-33 Score=295.06 Aligned_cols=294 Identities=18% Similarity=0.292 Sum_probs=217.1
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeee-cc-ccCCEEEEEEeCCCCCE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL-SR-HKGPVRGLEFNSFTPNL 138 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l-~~-h~~~V~~l~fsp~~~~~ 138 (719)
.+|...|++++|+++ +|++|+.|+.|+|||+... .. ..+..+ .. |.+.|.+++|++ ++++
T Consensus 11 ~~h~~~v~~~~~s~~----------~las~~~D~~i~lw~~~~~----~~---~~~~~~~~~~h~~~v~~v~~sp-~~~~ 72 (330)
T 2hes_X 11 KLYKEKIWSFDFSQG----------ILATGSTDRKIKLVSVKYD----DF---TLIDVLDETAHKKAIRSVAWRP-HTSL 72 (330)
T ss_dssp ECCSSCEEEEEEETT----------EEEEEESSSCEEEEECSSS----CC---EEEEEECTTCCCSCEEEEEECT-TSSE
T ss_pred ccCCCceeeeccCCC----------EEEEEcCCCEEEEEEecCC----Ce---EEEEEEecCCccCCEEEEEECC-CCCE
Confidence 468899999999874 8999999999999998421 11 334445 34 999999999999 7899
Q ss_pred EEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC----ceeEEecC
Q 046451 139 LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ----KPVISFSE 214 (719)
Q Consensus 139 lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~----~~~~~~~~ 214 (719)
|++|+.|++|+|||+...........+.....+|...|.+++|++++ .+|++++.|++|++||++.. +.+..+.
T Consensus 73 las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~~~~~~~~~- 150 (330)
T 2hes_X 73 LAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGEEYECISVLQ- 150 (330)
T ss_dssp EEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCCCCEEEEEEC-
T ss_pred EEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCCCeEEEEEec-
Confidence 99999999999999864321100000112234688899999999997 69999999999999999532 4555666
Q ss_pred CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC-CceEEeeCCCCCeeEEEeCCCC--CCeEEEEeCCCcEEE
Q 046451 215 SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM-SPVKEFVGHTKGVIAMSWCPND--SSYLLTCAKDNRTIC 291 (719)
Q Consensus 215 ~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~-~~~~~~~~h~~~V~~v~~sp~d--~~~l~sgs~Dg~I~i 291 (719)
.|...|.+++|+|++ .+|++++.|+ +|++||+++.. +++..+.+|...|.+++|++ + +.+|++++.|++|+|
T Consensus 151 ~h~~~v~~v~~~p~~-~~l~s~s~D~---~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~s~D~~v~i 225 (330)
T 2hes_X 151 EHSQDVKHVIWHPSE-ALLASSSYDD---TVRIWKDYDDDWECVAVLNGHEGTVWSSDFDK-TEGVFRLCSGSDDSTVRV 225 (330)
T ss_dssp CCSSCEEEEEECSSS-SEEEEEETTS---CEEEEEEETTEEEEEEEECCCSSCEEEEEECC-SSSSCEEEEEETTSCEEE
T ss_pred cCCCceEEEEECCCC-CEEEEEcCCC---eEEEEECCCCCeeEEEEccCCCCcEEEEEecC-CCCeeEEEEEeCCCeEEE
Confidence 789999999999998 5899999998 99999987542 46778899999999999999 5 668999999999999
Q ss_pred EECCCC--------eEEEEecC-CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc--cccCCCCCCCCCccCcce
Q 046451 292 WDTVSG--------EIVSELPA-GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR--YGVGDSNFSAAPLRAPKW 360 (719)
Q Consensus 292 wd~~~~--------~~~~~l~~-h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~--~~~~~~~~~~~~~~~p~w 360 (719)
||+..+ .....+.. |...|++++|++++ +|++++.||.|+|||+.+++. ............+...+|
T Consensus 226 w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~ 303 (330)
T 2hes_X 226 WKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKW 303 (330)
T ss_dssp EEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEE
T ss_pred EEecCCCccccceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEE
Confidence 998754 44555655 88999999999664 899999999999999987632 211100011112344556
Q ss_pred ec---CCCceeeeeCCcEEEEccC
Q 046451 361 YK---RPAGASFGFGGKLVSFHPK 381 (719)
Q Consensus 361 ~~---~~~~~s~s~~Gklv~~~~~ 381 (719)
.. ....++.+.||.+..|+.+
T Consensus 304 ~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 304 LELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp C-----CCEEEEETTSEEEEEEC-
T ss_pred ecCCCceEEEEecCCCcEEEEEec
Confidence 54 2245667778887777654
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.2e-33 Score=306.73 Aligned_cols=293 Identities=13% Similarity=0.197 Sum_probs=233.6
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceE
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLV 87 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~l 87 (719)
..+....|++|+++||+|+.||.| +|||+..+... .....|...|++++|++++ .+|
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i----------~iwd~~~~~~~-----~~~~~h~~~v~~~~~~~~~--------~~l 154 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDI----------KVLDSNFNLQR-----EIDQAHVSEITKLKFFPSG--------EAL 154 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCE----------EEECTTSCEEE-----EETTSSSSCEEEEEECTTS--------SEE
T ss_pred CceEEEEEecCCCEEEEEECCCCE----------EEEeCCCccee-----eecccccCccEEEEECCCC--------CEE
Confidence 445556899999999999988876 78887643321 2224689999999999998 799
Q ss_pred EEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccC
Q 046451 88 AGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRG 167 (719)
Q Consensus 88 asgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~ 167 (719)
++|+.||.|++||+ .++ +.+..+.+|.+.|.+++|++ ++++|++++.||.|++||+.+++....+.....
T Consensus 155 ~s~s~d~~i~iwd~------~~~---~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~ 224 (420)
T 3vl1_A 155 ISSSQDMQLKIWSV------KDG---SNPRTLIGHRATVTDIAIID-RGRNVLSASLDGTIRLWECGTGTTIHTFNRKEN 224 (420)
T ss_dssp EEEETTSEEEEEET------TTC---CCCEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECBTTB
T ss_pred EEEeCCCeEEEEeC------CCC---cCceEEcCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECCCCceeEEeecCCC
Confidence 99999999999999 455 67788899999999999999 789999999999999999998776554321110
Q ss_pred CC-----------------CCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCC
Q 046451 168 NG-----------------SAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVA 230 (719)
Q Consensus 168 ~~-----------------~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~ 230 (719)
.. ..+...+.+++|++++ .+|++++.||.|++||+++++.+..+...|...|.+++|++++.
T Consensus 225 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 303 (420)
T 3vl1_A 225 PHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG-KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNA 303 (420)
T ss_dssp TTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT-EEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCT
T ss_pred CCCCccEEEEecCCcceeeecccCcccceEEcCCC-CEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCC
Confidence 00 0012344555567776 68999999999999999999988888767889999999999997
Q ss_pred cEEEEEeCCCCCCcEEEEecCCCCCceEEeeC-CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC---------eEE
Q 046451 231 TQLVVASDEDSSPALRLWDMRNTMSPVKEFVG-HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG---------EIV 300 (719)
Q Consensus 231 ~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~-h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~---------~~~ 300 (719)
.+|++++.|+ .|++||+++...++..+.. |...|.++.|. ++.+|++++.|+.|++||+... ...
T Consensus 304 ~~l~~g~~dg---~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~ 378 (420)
T 3vl1_A 304 NYIYAGYENG---MLAQWDLRSPECPVGEFLINEGTPINNVYFA--AGALFVSSGFDTSIKLDIISDPESERPAIEFETP 378 (420)
T ss_dssp TEEEEEETTS---EEEEEETTCTTSCSEEEEESTTSCEEEEEEE--TTEEEEEETTTEEEEEEEECCTTCCSCEECTTSC
T ss_pred CEEEEEeCCC---eEEEEEcCCCcCchhhhhccCCCCceEEEeC--CCCEEEEecCCccEEEEeccCCCCCccceeccCc
Confidence 6899999998 9999999987666777776 66677777554 6789999999999999998763 222
Q ss_pred EEecCCCCCeEEeEEcCCCCC--EEEEEeCCCcEEEEeCCC
Q 046451 301 SELPAGTNWNFDIHWYPKIPG--VISASSFDGKIGIYNIEG 339 (719)
Q Consensus 301 ~~l~~h~~~v~~l~~spdg~~--~las~s~Dg~I~iwd~~~ 339 (719)
..+..|...|.+++|++++.. .|++++.+|.+.+|++++
T Consensus 379 ~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 379 TFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred cEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 335577888999999999941 455556689999999875
No 58
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.2e-32 Score=315.72 Aligned_cols=356 Identities=14% Similarity=0.193 Sum_probs=269.1
Q ss_pred ccCc-cceEEEcC--CCCeEEEeeccceeecccCCCceEEEEEeeccCCcc---cceeecccCCCCCceeeeecCCCCCC
Q 046451 6 GINR-SASVAFAP--DAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDR---DLLLVGESPSSERFNRLAWGKNGSGS 79 (719)
Q Consensus 6 ~~~~-V~~vafSp--dg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~---~~~~~~~~~~~~~V~~l~~sp~g~~~ 79 (719)
|.+. |.+++|+| |+++||+|+.||.| +|||+..+.... .........|...|.+++|++++
T Consensus 62 h~~~~v~~~~~sp~~~~~~l~s~~~dg~v----------~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--- 128 (615)
T 1pgu_A 62 HGSSVVTTVKFSPIKGSQYLCSGDESGKV----------IVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEG--- 128 (615)
T ss_dssp TTTSCEEEEEECSSTTCCEEEEEETTSEE----------EEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTS---
T ss_pred CCCceEEEEEECcCCCCCEEEEecCCCEE----------EEEeCCCCcccccccccccchhhcccccEEEEEEeCCC---
Confidence 5567 99999999 99999999988876 889996441100 01112234578999999999998
Q ss_pred CCCccceEEEEcCC----CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCC
Q 046451 80 EDFSLGLVAGGLVD----GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA 155 (719)
Q Consensus 80 ~~~~~~~lasgs~d----g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~ 155 (719)
++|++++.+ +.|++||.. ..+..+..|...|.+++|++++..+|++++.|+.|++||+.+
T Consensus 129 -----~~l~~~~~~~~~~~~v~~~d~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~ 192 (615)
T 1pgu_A 129 -----RRLCVVGEGRDNFGVFISWDSG-----------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP 192 (615)
T ss_dssp -----SEEEEEECCSSCSEEEEETTTC-----------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT
T ss_pred -----CEEEEeccCCCCccEEEEEECC-----------CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC
Confidence 788888887 789999852 567788899999999999994334899999999999999987
Q ss_pred CCCCCccCCccCCCCCCCC---CeEEEEecCC-CCcEEEEEeCCCcEEEEECCCCceeEEecC---CCCCceeEEEECCC
Q 046451 156 PAEPSHFPPLRGNGSAAQG---EISFVSWNSK-VQHILASTSYNGTTVVWDLKKQKPVISFSE---SIKRRCSVLQWNPD 228 (719)
Q Consensus 156 ~~~~~~~~~l~~~~~~h~~---~I~~l~~sp~-g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~---~~~~~i~~l~~sp~ 228 (719)
.+....+ ..|.. .|.+++|+++ + .+|++++.||.|++||+++++.+..+.. .|...|.+++|+ +
T Consensus 193 ~~~~~~~-------~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~ 263 (615)
T 1pgu_A 193 FKFSASD-------RTHHKQGSFVRDVEFSPDSG-EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-D 263 (615)
T ss_dssp BEEEEEE-------CSSSCTTCCEEEEEECSTTC-CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-S
T ss_pred cceeeee-------cccCCCCceEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-C
Confidence 7654442 23666 8999999999 6 6999999999999999999999988843 589999999999 7
Q ss_pred CCcEEEEEeCCCCCCcEEEEecCCCC--------------------------------------------CceEEeeCCC
Q 046451 229 VATQLVVASDEDSSPALRLWDMRNTM--------------------------------------------SPVKEFVGHT 264 (719)
Q Consensus 229 g~~~l~~~s~d~~~~~I~lwDl~~~~--------------------------------------------~~~~~~~~h~ 264 (719)
+ .+|++++.|+ .|++||+++.. +.+..+.+|.
T Consensus 264 ~-~~l~~~~~d~---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~ 339 (615)
T 1pgu_A 264 S-QKFATVGADA---TIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHN 339 (615)
T ss_dssp S-SEEEEEETTS---EEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCS
T ss_pred C-CEEEEEcCCC---cEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCC
Confidence 6 5888999887 89999987531 1112233444
Q ss_pred CCeeEEEeCCC--------------------------------C------------------------------------
Q 046451 265 KGVIAMSWCPN--------------------------------D------------------------------------ 276 (719)
Q Consensus 265 ~~V~~v~~sp~--------------------------------d------------------------------------ 276 (719)
..|.+++| ++ +
T Consensus 340 ~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~ 418 (615)
T 1pgu_A 340 KGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDG 418 (615)
T ss_dssp SCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSS
T ss_pred CCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCC
Confidence 44444444 20 1
Q ss_pred -------------------------------------CCeEEEEeC-CCcEEEEECCCCeEE-EEecCCCCCeEEeEEcC
Q 046451 277 -------------------------------------SSYLLTCAK-DNRTICWDTVSGEIV-SELPAGTNWNFDIHWYP 317 (719)
Q Consensus 277 -------------------------------------~~~l~sgs~-Dg~I~iwd~~~~~~~-~~l~~h~~~v~~l~~sp 317 (719)
+++|++++. |+.|++||+.+++.. ..+..|...|++++|++
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 498 (615)
T 1pgu_A 419 FTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISP 498 (615)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECT
T ss_pred CEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECC
Confidence 334445555 666666666655544 56678899999999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceec----------CC-CceeeeeCCcEEEEccCCC-CC
Q 046451 318 KIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYK----------RP-AGASFGFGGKLVSFHPKSS-AG 385 (719)
Q Consensus 318 dg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~----------~~-~~~s~s~~Gklv~~~~~~~-~~ 385 (719)
++ .+|++++.||.|+|||+.+++.+...... ....+....|.. .. ..++.+.||.+..|+..+. ..
T Consensus 499 ~g-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~ 576 (615)
T 1pgu_A 499 SE-TYIAAGDVMGKILLYDLQSREVKTSRWAF-RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKI 576 (615)
T ss_dssp TS-SEEEEEETTSCEEEEETTTTEEEECCSCC-CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCC
T ss_pred CC-CEEEEcCCCCeEEEeeCCCCcceeEeecC-CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCcee
Confidence 99 79999999999999999999887643321 123345566765 33 3456667888888888776 56
Q ss_pred ccccccccccceeeccCCCCC
Q 046451 386 HTSENSQHAPVHGVDQSKYGM 406 (719)
Q Consensus 386 ~~~~~~~~~~v~~v~~s~~~~ 406 (719)
...+.+|.+.|.+|++++|+.
T Consensus 577 ~~~~~~h~~~v~~l~~s~~~~ 597 (615)
T 1pgu_A 577 IKALNAHKDGVNNLLWETPST 597 (615)
T ss_dssp EEETTSSTTCEEEEEEEETTE
T ss_pred chhhhcCccceEEEEEcCCCC
Confidence 677899999999999999874
No 59
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.6e-33 Score=345.66 Aligned_cols=359 Identities=17% Similarity=0.233 Sum_probs=288.5
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
|.+.|.+++|+|||++||+|+.||.| +|||+..+..... ...|...|.+++|++++.. .
T Consensus 656 h~~~v~~~~~s~~~~~l~s~~~d~~v----------~vwd~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~------~ 714 (1249)
T 3sfz_A 656 HEDEVLCCAFSSDDSYIATCSADKKV----------KIWDSATGKLVHT-----YDEHSEQVNCCHFTNKSNH------L 714 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEE----------EEEETTTCCEEEE-----EECCSSCEEEEEECSSSSC------C
T ss_pred CCCCEEEEEEecCCCEEEEEeCCCeE----------EEEECCCCceEEE-----EcCCCCcEEEEEEecCCCc------e
Confidence 56789999999999999999988876 8899886543322 2468899999999996521 5
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC-
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP- 164 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~- 164 (719)
++++|+.||.|++||+ .++ ..+..+.+|.+.|.+++|++ ++++|++++.||.|++||+.+......+..
T Consensus 715 ~l~sg~~d~~v~vwd~------~~~---~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~ 784 (1249)
T 3sfz_A 715 LLATGSNDFFLKLWDL------NQK---ECRNTMFGHTNSVNHCRFSP-DDELLASCSADGTLRLWDVRSANERKSINVK 784 (1249)
T ss_dssp EEEEEETTSCEEEEET------TSS---SEEEEECCCSSCEEEEEECS-STTEEEEEESSSEEEEEEGGGTEEEEEEECC
T ss_pred EEEEEeCCCeEEEEEC------CCc---chhheecCCCCCEEEEEEec-CCCEEEEEECCCeEEEEeCCCCcccceeccc
Confidence 8999999999999999 555 77888999999999999999 889999999999999999876532211100
Q ss_pred -----------------------------------------------ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCc
Q 046451 165 -----------------------------------------------LRGNGSAAQGEISFVSWNSKVQHILASTSYNGT 197 (719)
Q Consensus 165 -----------------------------------------------l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~ 197 (719)
+......|...|.+++|++++ .++++++.||.
T Consensus 785 ~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~dg~ 863 (1249)
T 3sfz_A 785 RFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD-HLAVIALSQYC 863 (1249)
T ss_dssp CCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST-TEEEEECSSSC
T ss_pred ccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCC-CEEEEEeCCCe
Confidence 000012567789999999997 69999999999
Q ss_pred EEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC-------------------------
Q 046451 198 TVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN------------------------- 252 (719)
Q Consensus 198 I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~------------------------- 252 (719)
|++||+.+++.+..+. .|...|.+++|++++ ..+++++.|+ .|++||+++
T Consensus 864 v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg-~~l~s~s~dg---~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (1249)
T 3sfz_A 864 VELWNIDSRLKVADCR-GHLSWVHGVMFSPDG-SSFLTASDDQ---TIRVWETKKVCKNSAIVLKQEIDVVFQENETMVL 938 (1249)
T ss_dssp EEEEETTTTEEEEEEC-CCSSCEEEEEECTTS-SEEEEEETTS---CEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEE
T ss_pred EEEEEcCCCceeeecC-CCccceEEEEECCCC-CEEEEEeCCC---eEEEEEccccceeeeecccceeeEEEcCCCcEEE
Confidence 9999999999988888 899999999999998 4788888887 788887431
Q ss_pred -----------------------------------------------------CCCceEEeeCCCCCeeEEEeCCCCCCe
Q 046451 253 -----------------------------------------------------TMSPVKEFVGHTKGVIAMSWCPNDSSY 279 (719)
Q Consensus 253 -----------------------------------------------------~~~~~~~~~~h~~~V~~v~~sp~d~~~ 279 (719)
....+..+.+|...|.+++|++ ++++
T Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~-dg~~ 1017 (1249)
T 3sfz_A 939 AVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTA-DGKT 1017 (1249)
T ss_dssp EEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECS-SSSC
T ss_pred EecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECC-CCCE
Confidence 0123445667899999999999 9999
Q ss_pred EEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcc
Q 046451 280 LLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPK 359 (719)
Q Consensus 280 l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~ 359 (719)
|++++.||.|++||+.+++.+. +..|...|.++.|++++ .+++++.||.|++||+.+++........ ...+....
T Consensus 1018 l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~v~~~~~~~~~--~l~~~~~dg~v~vwd~~~~~~~~~~~~~--~~~v~~~~ 1092 (1249)
T 3sfz_A 1018 LISSSEDSVIQVWNWQTGDYVF-LQAHQETVKDFRLLQDS--RLLSWSFDGTVKVWNVITGRIERDFTCH--QGTVLSCA 1092 (1249)
T ss_dssp EEEECSSSBEEEEETTTTEEEC-CBCCSSCEEEEEECSSS--EEEEEESSSEEEEEETTTTCCCEEEECC--SSCCCCEE
T ss_pred EEEEcCCCEEEEEECCCCceEE-EecCCCcEEEEEEcCCC--cEEEEECCCcEEEEECCCCceeEEEccc--CCcEEEEE
Confidence 9999999999999999988764 56888999999999976 6888999999999999998865532211 12234445
Q ss_pred eecCC-CceeeeeCCcEEEEccCCCCCccccccccccceeeccCCCCCC
Q 046451 360 WYKRP-AGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGMV 407 (719)
Q Consensus 360 w~~~~-~~~s~s~~Gklv~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~ 407 (719)
|.... ..++.+.||.+..|+.........+.+|.+.|.++++|+||.-
T Consensus 1093 ~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~ 1141 (1249)
T 3sfz_A 1093 ISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGIL 1141 (1249)
T ss_dssp ECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSE
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCE
Confidence 55543 3456677788888888777778889999999999999999865
No 60
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.4e-34 Score=339.40 Aligned_cols=300 Identities=12% Similarity=0.103 Sum_probs=220.8
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
+.+...|.+++|++ |++||+++.|+.| +|||+..+..... ..+...|++++|++++
T Consensus 55 ~~~~~~V~~l~fsp-g~~L~S~s~D~~v----------~lWd~~~~~~~~~------~~~~~~V~~v~~sp~g------- 110 (902)
T 2oaj_A 55 LEDRSAIKEMRFVK-GIYLVVINAKDTV----------YVLSLYSQKVLTT------VFVPGKITSIDTDASL------- 110 (902)
T ss_dssp CSSCCCEEEEEEET-TTEEEEEETTCEE----------EEEETTTCSEEEE------EECSSCEEEEECCTTC-------
T ss_pred cCCCCCEEEEEEcC-CCEEEEEECcCeE----------EEEECCCCcEEEE------EcCCCCEEEEEECCCC-------
Confidence 34567899999999 8899999888776 8899876543222 2366789999999998
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCce-----------eeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEc
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLI-----------AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWD 152 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~-----------~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwd 152 (719)
.+|++|+.||.|++||+.. + ... ..+.+|.+.|.+++|+|.+..+|++|+.||.| |||
T Consensus 111 -~~l~sgs~dg~V~lwd~~~------~---~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd 179 (902)
T 2oaj_A 111 -DWMLIGLQNGSMIVYDIDR------D---QLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYS 179 (902)
T ss_dssp -SEEEEEETTSCEEEEETTT------T---EEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEE
T ss_pred -CEEEEEcCCCcEEEEECCC------C---ccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEE
Confidence 7999999999999999943 2 211 23467999999999999656899999999999 999
Q ss_pred CCCCCCCCccCCcc-----------CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEE--ecC--C--
Q 046451 153 LSAPAEPSHFPPLR-----------GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS--FSE--S-- 215 (719)
Q Consensus 153 l~~~~~~~~~~~l~-----------~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~--~~~--~-- 215 (719)
+++.+....+.... .....|...|++++|+++| .+|++++.||+|++||+++++.+.. +.. .
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg-~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~ 258 (902)
T 2oaj_A 180 LVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS-LHIITIHEDNSLVFWDANSGHMIMARTVFETEINV 258 (902)
T ss_dssp TTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS-SEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTS
T ss_pred CCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCcEEEEEeecccccCC
Confidence 99876544431000 0112355789999999997 6999999999999999999887653 210 1
Q ss_pred -----------CCCceeEEEEC----CCCCcEEEEEeCCCC---------------------------------------
Q 046451 216 -----------IKRRCSVLQWN----PDVATQLVVASDEDS--------------------------------------- 241 (719)
Q Consensus 216 -----------~~~~i~~l~~s----p~g~~~l~~~s~d~~--------------------------------------- 241 (719)
+...|.+++|+ |++..++++++.+..
T Consensus 259 ~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 338 (902)
T 2oaj_A 259 PQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFP 338 (902)
T ss_dssp CCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEEC
T ss_pred CCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEe
Confidence 24478999994 444345666644310
Q ss_pred ----------------------------------CCcEEEEecCCCCCceE-----------------------------
Q 046451 242 ----------------------------------SPALRLWDMRNTMSPVK----------------------------- 258 (719)
Q Consensus 242 ----------------------------------~~~I~lwDl~~~~~~~~----------------------------- 258 (719)
++.|++||+.++.....
T Consensus 339 ~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~ 418 (902)
T 2oaj_A 339 LPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWL 418 (902)
T ss_dssp CSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHH
T ss_pred cCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHH
Confidence 12456666533210000
Q ss_pred -----------EeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEE----EE--ec-----CCCCCeEEeEEc
Q 046451 259 -----------EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV----SE--LP-----AGTNWNFDIHWY 316 (719)
Q Consensus 259 -----------~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~----~~--l~-----~h~~~v~~l~~s 316 (719)
.+.+|...+.+++|++ ++++|++|+.|++|++||+.+++.. .. +. +|...|++|+|+
T Consensus 419 ~~~~~~~~~~~~l~G~~~~v~sv~~sp-dg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafs 497 (902)
T 2oaj_A 419 GALSAAQNKDYLLKGGVRTKRQKLPAE-YGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFA 497 (902)
T ss_dssp HHHHTTBCCCCSCCCSBCCCCCCCCCS-EEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEE
T ss_pred HHHhcccCCCCcccCCcCCCCcccccc-cCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEec
Confidence 1233444555667788 8999999999999999999877421 11 12 788899999999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 317 PKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 317 pdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
||+ .+||+|+.||+|+|||+.+++
T Consensus 498 pdg-~~LAsgs~DgtV~lwd~~~~~ 521 (902)
T 2oaj_A 498 AET-LELAVSIETGDVVLFKYEVNQ 521 (902)
T ss_dssp TTT-TEEEEEETTSCEEEEEEEECC
T ss_pred CCC-CeEEEEecCcEEEEEEecCcc
Confidence 999 799999999999999998774
No 61
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.3e-32 Score=286.93 Aligned_cols=253 Identities=19% Similarity=0.327 Sum_probs=208.6
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC-CCCEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF-TPNLL 139 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~-~~~~l 139 (719)
.+|...|++++|++++ ++|++|+.|++|+|||+.. .+. +.+..+.+|.+.|.+++|++. ++++|
T Consensus 6 ~~h~~~V~~~~~s~~g--------~~las~s~D~~v~iw~~~~----~~~---~~~~~l~gH~~~V~~v~~s~~~~g~~l 70 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYG--------KRMATCSSDKTIKIFEVEG----ETH---KLIDTLTGHEGPVWRVDWAHPKFGTIL 70 (297)
T ss_dssp CSCSSCEEEEEECTTS--------SEEEEEETTSCEEEEEBCS----SCB---CCCEEECCCSSCEEEEEECCGGGCSEE
T ss_pred cCCcCceEEEEECCCC--------CEEEEEeCCCEEEEEecCC----CCc---EEEEEEccccCCeEEEEecCCCcCCEE
Confidence 5689999999999998 7999999999999999842 122 567889999999999999862 47899
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCC-CcEEEEEeCCCcEEEEECCCCce--eEEecCCC
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKV-QHILASTSYNGTTVVWDLKKQKP--VISFSESI 216 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g-~~~l~s~s~dg~I~iwd~~~~~~--~~~~~~~~ 216 (719)
++|+.|++|+|||+.+++.... .....|...|.+++|+++. ..+|++++.|++|++||++++.. ...+. .|
T Consensus 71 ~s~s~D~~v~iWd~~~~~~~~~-----~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~-~h 144 (297)
T 2pm7_B 71 ASCSYDGKVMIWKEENGRWSQI-----AVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID-AH 144 (297)
T ss_dssp EEEETTTEEEEEEBSSSCBCCC-----EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE-CC
T ss_pred EEEcCCCEEEEEEcCCCceEEE-----EEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee-cc
Confidence 9999999999999987642211 1123477899999999972 26999999999999999987632 33444 78
Q ss_pred CCceeEEEECCCC------------CcEEEEEeCCCCCCcEEEEecCCCCC---ceEEeeCCCCCeeEEEeCCCC---CC
Q 046451 217 KRRCSVLQWNPDV------------ATQLVVASDEDSSPALRLWDMRNTMS---PVKEFVGHTKGVIAMSWCPND---SS 278 (719)
Q Consensus 217 ~~~i~~l~~sp~g------------~~~l~~~s~d~~~~~I~lwDl~~~~~---~~~~~~~h~~~V~~v~~sp~d---~~ 278 (719)
...|.+++|++++ ..+|++++.|+ +|+|||+++... .+..+.+|...|.+++|+| + +.
T Consensus 145 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~---~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp-~~~~~~ 220 (297)
T 2pm7_B 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN---LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRS 220 (297)
T ss_dssp SSCEEEEEECCCC------------CCEEEEEETTS---CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSE
T ss_pred cCccceEeecCCcccccccCCCCCCcceEEEEcCCC---cEEEEEEcCCCceEEEEEEecCCCCceEEEEECC-CCCCce
Confidence 9999999999973 25899999998 999999986542 4567889999999999999 5 48
Q ss_pred eEEEEeCCCcEEEEECCCCe---EEEEe--cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 279 YLLTCAKDNRTICWDTVSGE---IVSEL--PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 279 ~l~sgs~Dg~I~iwd~~~~~---~~~~l--~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
+|++++.|++|+|||+++.. ....+ ..|...|++++|++++ .+|++++.|++|+||+...
T Consensus 221 ~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 221 YMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS-CCEEEEETTSCEEEEEECT
T ss_pred EEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCC-CEEEEEcCCCcEEEEEECC
Confidence 99999999999999997642 22233 4678899999999999 7999999999999999763
No 62
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.9e-32 Score=285.43 Aligned_cols=283 Identities=17% Similarity=0.303 Sum_probs=229.5
Q ss_pred cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 10 SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 10 V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
+++|+||+++ +||+|. |+.| +|||+++++.... ....+|...|++++|++++ ++|++
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV----------~iWd~~tg~~~~~---~~~~~~~~~V~~v~~~~~~--------~~l~s 84 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSV----------YLWSASSGDILQL---LQMEQPGEYISSVAWIKEG--------NYLAV 84 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEE----------EEEETTTCCEEEE---EECCSTTCCEEEEEECTTS--------SEEEE
T ss_pred ceEEEECCCC-EEEEEe-CCEE----------EEEECCCCCEEEE---EEecCCCCeEEEEEECCCC--------CEEEE
Confidence 4789999986 888773 5555 8999887654333 3335688899999999998 79999
Q ss_pred EcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCC
Q 046451 90 GLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNG 169 (719)
Q Consensus 90 gs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~ 169 (719)
|+.||.|+|||+ .++ +.+..+.+|...+.++.+. +.+|++++.++.+++|+......... ..
T Consensus 85 gs~Dg~v~iw~~------~~~---~~~~~~~~h~~~~~~~~~~---~~~l~s~~~~~~~~~~~~~~~~~~~~------~~ 146 (318)
T 4ggc_A 85 GTSSAEVQLWDV------QQQ---KRLRNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVA------TL 146 (318)
T ss_dssp EETTSEEEEEET------TTT---EEEEEEECCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEE------EE
T ss_pred EECCCcEEEeec------CCc---eeEEEecCccceEEEeecC---CCEEEEEecCCceEeeecCCCceeEE------EE
Confidence 999999999999 556 7888999999999887774 57999999999999999887654322 12
Q ss_pred CCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCcee----EEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 170 SAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPV----ISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 170 ~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~----~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
..|...+..+.|++++ .+|++++.||+|++||+++++.. .... .+...|.++.+++++..++.+++.. .++.|
T Consensus 147 ~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~i 223 (318)
T 4ggc_A 147 SGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFT-QHQGAVKAVAWCPWQSNVLATGGGT-SDRHI 223 (318)
T ss_dssp ECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCBTTBSCCSEEEC-CCCSCEEEEEECTTSTTEEEEEECT-TTCEE
T ss_pred cCccCceEEEEEcCCC-CEEEEEecCcceeEEECCCCcccccceeeec-ccCCceEEEEecCCCCcEEEEEecC-CCCEE
Confidence 3577899999999997 59999999999999999986532 2222 5778899999999987766544332 12389
Q ss_pred EEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe--CCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEE
Q 046451 246 RLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA--KDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVI 323 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs--~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~l 323 (719)
++||.+.. . ......+...+..+.|++ ++..+++++ .|+.|+|||+.+++.+.++.+|.+.|++++|++++ .+|
T Consensus 224 ~lwd~~~~-~-~~~~~~~~~~v~~~~~~~-~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg-~~l 299 (318)
T 4ggc_A 224 RIWNVCSG-A-CLSAVDAHSQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDG-ATV 299 (318)
T ss_dssp EEEETTTC-C-EEEEEECSSCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-SCE
T ss_pred EEEecccc-c-ccccccceeeeeeeeecc-cccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC-CEE
Confidence 99999764 3 334445778899999999 677666654 79999999999999999999999999999999999 799
Q ss_pred EEEeCCCcEEEEeCCCC
Q 046451 324 SASSFDGKIGIYNIEGC 340 (719)
Q Consensus 324 as~s~Dg~I~iwd~~~~ 340 (719)
+|++.||+|+|||+...
T Consensus 300 ~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 300 ASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEETTTEEEEECCSCC
T ss_pred EEEecCCeEEEEECCCC
Confidence 99999999999999764
No 63
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-32 Score=299.30 Aligned_cols=285 Identities=16% Similarity=0.215 Sum_probs=224.8
Q ss_pred cccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecccc---------------
Q 046451 59 GESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHK--------------- 123 (719)
Q Consensus 59 ~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~--------------- 123 (719)
...+|...|++++|+++| .+|++|+ ++.++||++ .++ ..+..+..|.
T Consensus 59 ~~~~h~~~V~~v~fspdg--------~~la~g~-~~~v~i~~~------~~g---~~~~~l~~~~~~~~~~~~~~~~~~~ 120 (393)
T 1erj_A 59 KSLDHTSVVCCVKFSNDG--------EYLATGC-NKTTQVYRV------SDG---SLVARLSDDSAANKDPENLNTSSSP 120 (393)
T ss_dssp EEEECSSCCCEEEECTTS--------SEEEEEC-BSCEEEEET------TTC---CEEEEECC-----------------
T ss_pred EecCCCCEEEEEEECCCC--------CEEEEEc-CCcEEEEEe------cCC---CEEEEecCccccccccccccccccC
Confidence 344689999999999998 7898886 789999998 444 4555554433
Q ss_pred ---CCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEE
Q 046451 124 ---GPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVV 200 (719)
Q Consensus 124 ---~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~i 200 (719)
..|.+++|++ ++++|++|+.|+.|+|||+.+.+.... ..+|...|.+++|++++ .+|++++.|++|++
T Consensus 121 ~~~~~v~~v~~s~-dg~~l~s~~~d~~i~iwd~~~~~~~~~-------~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~i 191 (393)
T 1erj_A 121 SSDLYIRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMI-------LQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRI 191 (393)
T ss_dssp CCCCBEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEE-------ECCCSSCEEEEEECTTS-SEEEEEETTSEEEE
T ss_pred CCceeEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEE-------EccCCCCEEEEEEcCCC-CEEEEecCCCcEEE
Confidence 2499999999 889999999999999999988765433 24578899999999997 58999999999999
Q ss_pred EECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEe-------eCCCCCeeEEEeC
Q 046451 201 WDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF-------VGHTKGVIAMSWC 273 (719)
Q Consensus 201 wd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~-------~~h~~~V~~v~~s 273 (719)
||+++++....+. +...+.+++|++....+|++++.|+ .|++||+++. ..+..+ .+|...|.+++|+
T Consensus 192 wd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~s~d~---~v~iwd~~~~-~~~~~~~~~~~~~~~h~~~v~~v~~~ 265 (393)
T 1erj_A 192 WDLRTGQCSLTLS--IEDGVTTVAVSPGDGKYIAAGSLDR---AVRVWDSETG-FLVERLDSENESGTGHKDSVYSVVFT 265 (393)
T ss_dssp EETTTTEEEEEEE--CSSCEEEEEECSTTCCEEEEEETTS---CEEEEETTTC-CEEEEEC------CCCSSCEEEEEEC
T ss_pred EECCCCeeEEEEE--cCCCcEEEEEECCCCCEEEEEcCCC---cEEEEECCCC-cEEEeecccccCCCCCCCCEEEEEEC
Confidence 9999999888877 6778999999994346899999998 8999999875 444444 5799999999999
Q ss_pred CCCCCeEEEEeCCCcEEEEECCCC------------eEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 274 PNDSSYLLTCAKDNRTICWDTVSG------------EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 274 p~d~~~l~sgs~Dg~I~iwd~~~~------------~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
+ ++++|++++.|+.|++||+++. .+...+.+|...|.+++|++++ .+|++++.|+.|++||+.+++
T Consensus 266 ~-~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 266 R-DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND-EYILSGSKDRGVLFWDKKSGN 343 (393)
T ss_dssp T-TSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG-CEEEEEETTSEEEEEETTTCC
T ss_pred C-CCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCC-CEEEEEeCCCeEEEEECCCCe
Confidence 9 9999999999999999999753 4556778999999999999999 799999999999999999987
Q ss_pred ccccCCCCCCCCCccCcceecC-------CCceeeeeCCcEEEEcc
Q 046451 342 RYGVGDSNFSAAPLRAPKWYKR-------PAGASFGFGGKLVSFHP 380 (719)
Q Consensus 342 ~~~~~~~~~~~~~~~~p~w~~~-------~~~~s~s~~Gklv~~~~ 380 (719)
.+...... ...+....|... ...++.+.||++.+|..
T Consensus 344 ~~~~l~~h--~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 344 PLLMLQGH--RNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp EEEEEECC--SSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred EEEEECCC--CCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 65532211 111223333321 13456666777777654
No 64
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.7e-32 Score=314.45 Aligned_cols=345 Identities=14% Similarity=0.180 Sum_probs=275.8
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCC-ceeeeecC--CCCCCCC
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSER-FNRLAWGK--NGSGSED 81 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~-V~~l~~sp--~g~~~~~ 81 (719)
.+.+.|.+++|||||++||+++ ++. ++|||++.+..... .......|... |++++|++ ++
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~----------v~v~~~~~~~~~~~-~~~~~~~h~~~~v~~~~~sp~~~~----- 78 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKS----------AFVRCLDDGDSKVP-PVVQFTGHGSSVVTTVKFSPIKGS----- 78 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTE----------EEEEECCSSCCSSC-SEEEECTTTTSCEEEEEECSSTTC-----
T ss_pred CccCceeEEEECCCCCEEEEec-CCe----------EEEEECCCCCCccc-cceEEecCCCceEEEEEECcCCCC-----
Confidence 3567899999999999999996 454 48999985511101 11233568889 99999999 88
Q ss_pred CccceEEEEcCCCcEEEEcCCccccC--CCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC----CcEEEEcCCC
Q 046451 82 FSLGLVAGGLVDGSIDIWNPLSLISS--GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD----GEICIWDLSA 155 (719)
Q Consensus 82 ~~~~~lasgs~dg~I~lwd~~~~~~~--~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d----g~I~iwdl~~ 155 (719)
++|++|+.||.|+|||+.+.... .+. .....+..|...|.+++|++ ++++|++++.+ +.|++||.
T Consensus 79 ---~~l~s~~~dg~v~vw~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d~-- 149 (615)
T 1pgu_A 79 ---QYLCSGDESGKVIVWGWTFDKESNSVEV---NVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWDS-- 149 (615)
T ss_dssp ---CEEEEEETTSEEEEEEEEEEGGGTEEEE---EEEEEEECCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETTT--
T ss_pred ---CEEEEecCCCEEEEEeCCCCcccccccc---cccchhhcccccEEEEEEeC-CCCEEEEeccCCCCccEEEEEEC--
Confidence 79999999999999998431000 022 56677888999999999999 88999999988 78999983
Q ss_pred CCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCC---ceeEEEECCC-CCc
Q 046451 156 PAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR---RCSVLQWNPD-VAT 231 (719)
Q Consensus 156 ~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~---~i~~l~~sp~-g~~ 231 (719)
.+.... ...|...|.+++|++++..+|++++.|+.|++||+++++.+..+. .|.. .|.+++|+++ + .
T Consensus 150 ~~~~~~-------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~-~ 220 (615)
T 1pgu_A 150 GNSLGE-------VSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR-THHKQGSFVRDVEFSPDSG-E 220 (615)
T ss_dssp CCEEEE-------CCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEEC-SSSCTTCCEEEEEECSTTC-C
T ss_pred CCccee-------eecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeec-ccCCCCceEEEEEECCCCC-C
Confidence 332222 235788999999999986689999999999999999999998888 6777 8999999999 6 5
Q ss_pred EEEEEeCCCCCCcEEEEecCCCCCceEEe-e---CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCC-
Q 046451 232 QLVVASDEDSSPALRLWDMRNTMSPVKEF-V---GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAG- 306 (719)
Q Consensus 232 ~l~~~s~d~~~~~I~lwDl~~~~~~~~~~-~---~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h- 306 (719)
+|++++.++ .|++||+++. +.+..+ . .|...|.+++|+ ++.+|++++.|+.|++||+++++.+..+..+
T Consensus 221 ~l~~~~~dg---~i~vwd~~~~-~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~ 294 (615)
T 1pgu_A 221 FVITVGSDR---KISCFDGKSG-EFLKYIEDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDK 294 (615)
T ss_dssp EEEEEETTC---CEEEEETTTC-CEEEECCBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCT
T ss_pred EEEEEeCCC---eEEEEECCCC-CEeEEecccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC
Confidence 889999888 8999999875 566777 5 899999999999 7899999999999999999999999998877
Q ss_pred ---CCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCC
Q 046451 307 ---TNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 307 ---~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
...+.++.|+ ++ .+|++++.||.|++||+.+++........ ...+....| .. .++.+.||.+..|...
T Consensus 295 ~~~~~~~~~~~~~-~~-~~l~~~~~~g~i~~~d~~~~~~~~~~~~~--~~~v~~~~~-~~--l~~~~~dg~i~~w~~~-- 365 (615)
T 1pgu_A 295 QQLGNQQVGVVAT-GN-GRIISLSLDGTLNFYELGHDEVLKTISGH--NKGITALTV-NP--LISGSYDGRIMEWSSS-- 365 (615)
T ss_dssp TCGGGCEEEEEEE-ET-TEEEEEETTSCEEEEETTEEEEEEEECCC--SSCEEEEET-TT--TEEEETTSCEEETTTT--
T ss_pred CcccCceeEEEeC-CC-CeEEEEECCCCEEEEECCCCcEEEEEeCC--CCCEEEEEe-cC--cEEECCCCeEEEEEch--
Confidence 3578889997 65 79999999999999999987765533221 123355556 44 6788888998888876
Q ss_pred CCccccccccccceeeccC
Q 046451 384 AGHTSENSQHAPVHGVDQS 402 (719)
Q Consensus 384 ~~~~~~~~~~~~v~~v~~s 402 (719)
... .+|...|.+++++
T Consensus 366 --~~~-~~~~~~v~~~~~~ 381 (615)
T 1pgu_A 366 --SMH-QDHSNLIVSLDNS 381 (615)
T ss_dssp --EEE-CCCCSCEEEEECC
T ss_pred --hhc-CcccCceEEEEEC
Confidence 222 7788888888884
No 65
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.6e-32 Score=293.23 Aligned_cols=298 Identities=16% Similarity=0.250 Sum_probs=233.6
Q ss_pred ccCccceEEEcC-CCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeec--------ccCCCCCceeeeecCCC
Q 046451 6 GINRSASVAFAP-DAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVG--------ESPSSERFNRLAWGKNG 76 (719)
Q Consensus 6 ~~~~V~~vafSp-dg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~--------~~~~~~~V~~l~~sp~g 76 (719)
|.+.|.+++|+| ++++||+|+.||.| +|||+........+.... ...|...|++++|++++
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~dg~i----------~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 111 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGSDGVI----------VLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHD 111 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEETTSCE----------EEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTC
T ss_pred cCCcEEEEEEecCCCCEEEEEcCCCeE----------EEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCC
Confidence 678999999999 99999999988876 889988766554432111 12488999999999944
Q ss_pred CCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC--CCEEEEEeCCCcEEEEcCC
Q 046451 77 SGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT--PNLLASGADDGEICIWDLS 154 (719)
Q Consensus 77 ~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~--~~~lasgs~dg~I~iwdl~ 154 (719)
. .+|++++.||.|++||+. ++ .....+. +...+.++.|++.+ +.+|++++.||.|++||+.
T Consensus 112 ~-------~~l~s~~~d~~i~iwd~~------~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 112 T-------GMFTSSSFDKTLKVWDTN------TL---QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp T-------TCEEEEETTSEEEEEETT------TT---EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred C-------cEEEEEeCCCeEEEeeCC------CC---ccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 2 699999999999999993 33 4444444 78889999998842 3499999999999999999
Q ss_pred CCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc-eeEEec--------------CCCCCc
Q 046451 155 APAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK-PVISFS--------------ESIKRR 219 (719)
Q Consensus 155 ~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~-~~~~~~--------------~~~~~~ 219 (719)
+.+....+ ..|...|.+++|++++..+|++++.||.|++||++++. .+..+. ..|...
T Consensus 175 ~~~~~~~~-------~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (408)
T 4a11_B 175 SGSCSHIL-------QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGK 247 (408)
T ss_dssp SSCCCEEE-------CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSC
T ss_pred Ccceeeee-------cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCc
Confidence 87765442 34778999999999987689999999999999998765 333331 257889
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCC-----CCCeeEEEeCCCCCCeEEEEeCCCcEEEEEC
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGH-----TKGVIAMSWCPNDSSYLLTCAKDNRTICWDT 294 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h-----~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~ 294 (719)
|.+++|++++ .+|++++.|+ .|++||+++... ...+..+ ...+. +.+.......+++++.|+.|++||+
T Consensus 248 v~~~~~~~~~-~~l~~~~~dg---~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~d~ 321 (408)
T 4a11_B 248 VNGLCFTSDG-LHLLTVGTDN---RMRLWNSSNGEN-TLVNYGKVCNNSKKGLK-FTVSCGCSSEFVFVPYGSTIAVYTV 321 (408)
T ss_dssp EEEEEECTTS-SEEEEEETTS---CEEEEETTTCCB-CCCCCCCCCCCCSSCCC-CEECCSSSSCEEEEEETTEEEEEET
T ss_pred eeEEEEcCCC-CEEEEecCCC---eEEEEECCCCcc-ceeccccccccccccce-eEEecCCCceEEEEecCCEEEEEEC
Confidence 9999999998 5788999888 899999987643 2222211 11222 2222225667888889999999999
Q ss_pred CCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 295 VSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 295 ~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
.+++.+..+.+|...|++++|++++ .+|++++.||.|+|||+++.+.+.
T Consensus 322 ~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 322 YSGEQITMLKGHYKTVDCCVFQSNF-QELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp TTCCEEEEECCCSSCEEEEEEETTT-TEEEEEETTSCEEEEEECC-----
T ss_pred cCCcceeeeccCCCeEEEEEEcCCC-CEEEEECCCCeEEEEeCCCCCccC
Confidence 9999999999999999999999999 799999999999999999988765
No 66
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.3e-32 Score=288.31 Aligned_cols=281 Identities=15% Similarity=0.140 Sum_probs=235.8
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.|.+.|.+++|+||+++|++|+.||.| +||++......... .....|...|++++|++++
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v----------~iw~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~-------- 68 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSL----------TVYKFDIQAKNVDL--LQSLRYKHPLLCCNFIDNT-------- 68 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEE----------EEEEEETTTTEEEE--EEEEECSSCEEEEEEEESS--------
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeE----------EEEEeCCCCccccc--eeeeecCCceEEEEECCCC--------
Confidence 366889999999999999999888776 88999865422222 3334788999999999997
Q ss_pred c-eEEEEcCCCcEEEEcC-CccccCCCCCCCCceeeecc--ccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCC-----
Q 046451 85 G-LVAGGLVDGSIDIWNP-LSLISSGETGGNPLIAHLSR--HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA----- 155 (719)
Q Consensus 85 ~-~lasgs~dg~I~lwd~-~~~~~~~~~~~~~~~~~l~~--h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~----- 155 (719)
. +|++|+.||.|++||+ .. .....+.. |...|.+++|++ +++|++++.|+.|++||+.+
T Consensus 69 ~~~l~~~~~dg~i~~wd~~~~----------~~~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~ 136 (342)
T 1yfq_A 69 DLQIYVGTVQGEILKVDLIGS----------PSFQALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGV 136 (342)
T ss_dssp SEEEEEEETTSCEEEECSSSS----------SSEEECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBC
T ss_pred CcEEEEEcCCCeEEEEEeccC----------CceEeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEccccccccc
Confidence 8 8999999999999998 53 34577788 999999999998 78999999999999999987
Q ss_pred ----CCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC-Cce-eEEecCCCCCceeEEEECC-C
Q 046451 156 ----PAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK-QKP-VISFSESIKRRCSVLQWNP-D 228 (719)
Q Consensus 156 ----~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~-~~~-~~~~~~~~~~~i~~l~~sp-~ 228 (719)
.+....+ .|...|.+++|++++ |++++.|+.|++||+++ +.. .......+...+.+++|++ +
T Consensus 137 ~~~~~~~~~~~--------~~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 205 (342)
T 1yfq_A 137 IAVKNLNSNNT--------KVKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKE 205 (342)
T ss_dssp EEEEESCSSSS--------SSCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGG
T ss_pred ccccCCeeeEE--------eeCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCC
Confidence 5544332 166789999999874 89999999999999998 543 2223336788999999999 8
Q ss_pred CCcEEEEEeCCCCCCcEEEEecCCC-----CCceEEeeCCCC---------CeeEEEeCCCCCCeEEEEeCCCcEEEEEC
Q 046451 229 VATQLVVASDEDSSPALRLWDMRNT-----MSPVKEFVGHTK---------GVIAMSWCPNDSSYLLTCAKDNRTICWDT 294 (719)
Q Consensus 229 g~~~l~~~s~d~~~~~I~lwDl~~~-----~~~~~~~~~h~~---------~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~ 294 (719)
+ .++++++.++ .|++||++.. ...+..+..|.. .|.+++|++ ++++|++++.||.|++||+
T Consensus 206 ~-~~l~~~~~dg---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 206 Q-EGYACSSIDG---RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNL 280 (342)
T ss_dssp G-CEEEEEETTS---EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT-TTCCEEEEETTSCEEEEET
T ss_pred C-CEEEEEecCC---cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC-CCCEEEEecCCceEEEEcC
Confidence 7 5788999888 9999999876 367788888865 999999999 8999999999999999999
Q ss_pred CCCeEEEEecCC-CCCeEEeEEcCCCCCEEEEEeCCCc-EEEEe
Q 046451 295 VSGEIVSELPAG-TNWNFDIHWYPKIPGVISASSFDGK-IGIYN 336 (719)
Q Consensus 295 ~~~~~~~~l~~h-~~~v~~l~~spdg~~~las~s~Dg~-I~iwd 336 (719)
.+++.+..+.+| ...|++++ +++ .+|++++.||. .+.|.
T Consensus 281 ~~~~~~~~~~~~h~~~v~~~~--~~~-~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 281 QTRKKIKNFAKFNEDSVVKIA--CSD-NILCLATSDDTFKTNAA 321 (342)
T ss_dssp TTTEEEEECCCCSSSEEEEEE--ECS-SEEEEEEECTHHHHCSS
T ss_pred ccHhHhhhhhcccCCCceEec--CCC-CeEEEEecCCccccccc
Confidence 999999999998 99999999 888 79999999998 44444
No 67
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-34 Score=313.54 Aligned_cols=293 Identities=16% Similarity=0.181 Sum_probs=228.9
Q ss_pred ccCccceEEEcC-CCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 6 GINRSASVAFAP-DAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 6 ~~~~V~~vafSp-dg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
|.+.|++++|+| |+++||+|+.||.| +|||+........+.......|...|++++|++++
T Consensus 62 h~~~V~~~~~s~~~~~~l~s~s~dg~v----------~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-------- 123 (437)
T 3gre_A 62 EPNSITSSAVSPGETPYLITGSDQGVI----------KIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNF-------- 123 (437)
T ss_dssp TTSCEEEEEEECSSSCEEEEEETTSEE----------EEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTS--------
T ss_pred CCCceEEEEECCCCCCEEEEecCCceE----------EEeECcccccCcccceeeeccCCCCEEEEEEeCCC--------
Confidence 458999999999 99999999988877 89998862222212112223589999999999987
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc------------ccCCEEEEE--EeCCCCCEEEEEeCCCcEEE
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR------------HKGPVRGLE--FNSFTPNLLASGADDGEICI 150 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~------------h~~~V~~l~--fsp~~~~~lasgs~dg~I~i 150 (719)
.+|++|+.||.|++||++... ++ ..+..+.. +...+.++. +++ ++++|++++.||.|++
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~---~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~i 196 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQ---QE---SEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVII 196 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEE---ET---TEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEE
T ss_pred CEEEEEeCCCEEEEEEecccc---CC---ceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEE
Confidence 799999999999999984210 11 22222221 455666666 445 6889999999999999
Q ss_pred EcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECC---
Q 046451 151 WDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNP--- 227 (719)
Q Consensus 151 wdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp--- 227 (719)
||+++.+....+ .. ..|...|++++|++++ .+|++++.||.|++||+++++.+..+...+...|.+++|++
T Consensus 197 wd~~~~~~~~~~---~~--~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s 270 (437)
T 3gre_A 197 FDIRTLERLQII---EN--SPRHGAVSSICIDEEC-CVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYG 270 (437)
T ss_dssp EETTTCCEEEEE---EC--CGGGCCEEEEEECTTS-CEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTC
T ss_pred EeCCCCeeeEEE---cc--CCCCCceEEEEECCCC-CEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccC
Confidence 999987765442 21 1266799999999996 69999999999999999999998887655778999997665
Q ss_pred -CCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC--------------------------CCCCeeEEEeCCCCCCeE
Q 046451 228 -DVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG--------------------------HTKGVIAMSWCPNDSSYL 280 (719)
Q Consensus 228 -~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~--------------------------h~~~V~~v~~sp~d~~~l 280 (719)
++ .+|++++.|+ .|++||+++. +.+..+.+ |...|++++|+ ++++|
T Consensus 271 ~~~-~~l~s~~~dg---~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~--~~~~l 343 (437)
T 3gre_A 271 KNS-VIVVGGSSKT---FLTIWNFVKG-HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS--NDKIL 343 (437)
T ss_dssp TTE-EEEEEESTTE---EEEEEETTTT-EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE--TTEEE
T ss_pred CCc-cEEEEEcCCC---cEEEEEcCCC-cEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC--CceEE
Confidence 44 5788888888 9999999865 44455543 45567888888 45899
Q ss_pred EEEeCCCcEEEEECCCCeEEEEecC-------------------------------------CCCCeEEeEEcCC-CCCE
Q 046451 281 LTCAKDNRTICWDTVSGEIVSELPA-------------------------------------GTNWNFDIHWYPK-IPGV 322 (719)
Q Consensus 281 ~sgs~Dg~I~iwd~~~~~~~~~l~~-------------------------------------h~~~v~~l~~spd-g~~~ 322 (719)
++|+.|+.|++||+.+++.+..+.+ |.+.|++++|+++ +..+
T Consensus 344 ~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~ 423 (437)
T 3gre_A 344 LTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPL 423 (437)
T ss_dssp EEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEE
T ss_pred EecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceE
Confidence 9999999999999999887766655 7889999999998 2369
Q ss_pred EEEEeCCCcEEEEe
Q 046451 323 ISASSFDGKIGIYN 336 (719)
Q Consensus 323 las~s~Dg~I~iwd 336 (719)
|++++.||.|+||+
T Consensus 424 l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 424 LVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEETTSCEEEEC
T ss_pred EEEEcCCceEEEeC
Confidence 99999999999995
No 68
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=8.6e-33 Score=304.40 Aligned_cols=306 Identities=16% Similarity=0.217 Sum_probs=227.1
Q ss_pred ccccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCC-----cccce-eecccCCC------------C
Q 046451 4 IKGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSE-----DRDLL-LVGESPSS------------E 65 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~-----~~~~~-~~~~~~~~------------~ 65 (719)
+.+.+.|++++|+|||++||+|+.||.| +|||+..... ...+. .....+|. .
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v----------~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~ 94 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRV----------VIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEE 94 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEE----------EEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeE----------EEEEecCCCCCCcccccceeEecccccccccccccccccccC
Confidence 5567899999999999999999988877 7888875542 11111 12233566 8
Q ss_pred CceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCC--------C--------CCC--------------Cc
Q 046451 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGE--------T--------GGN--------------PL 115 (719)
Q Consensus 66 ~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~--------~--------~~~--------------~~ 115 (719)
.|++++|++++.. .+|++++.||.|++||+........ + ... ..
T Consensus 95 ~V~~l~~~~~~~~------~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (447)
T 3dw8_B 95 KINKIRWLPQKNA------AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASP 168 (447)
T ss_dssp CCCEEEECCCCSS------SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEE
T ss_pred ceEEEEEcCCCCc------ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccc
Confidence 8999999998621 3899999999999999853211000 0 000 00
Q ss_pred e-eeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCC-CCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe
Q 046451 116 I-AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPA-EPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS 193 (719)
Q Consensus 116 ~-~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~-~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s 193 (719)
. ..+.+|...|.+++|++ ++++|++| .|+.|+|||+.+.. ....+.........|...|++++|++++..+|++++
T Consensus 169 ~~~~~~~h~~~v~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~ 246 (447)
T 3dw8_B 169 RRIFANAHTYHINSISINS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS 246 (447)
T ss_dssp EEEECSCCSSCCCEEEECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE
T ss_pred eEEeccCCCcceEEEEEcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEe
Confidence 1 11367999999999999 78999998 79999999998433 221110001123457889999999999757999999
Q ss_pred CCCcEEEEECCCCce----eEEecCCCCC------------ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCce
Q 046451 194 YNGTTVVWDLKKQKP----VISFSESIKR------------RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPV 257 (719)
Q Consensus 194 ~dg~I~iwd~~~~~~----~~~~~~~~~~------------~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~ 257 (719)
.||.|++||+++++. +..+. .+.. .|.+++|++++ .+|++++. + .|++||+++...++
T Consensus 247 ~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~-~---~v~iwd~~~~~~~~ 320 (447)
T 3dw8_B 247 SKGTIRLCDMRASALCDRHSKLFE-EPEDPSNRSFFSEIISSISDVKFSHSG-RYMMTRDY-L---SVKVWDLNMENRPV 320 (447)
T ss_dssp TTSCEEEEETTTCSSSCTTCEEEC-CC-----CCHHHHHTTCEEEEEECTTS-SEEEEEES-S---EEEEEETTCCSSCS
T ss_pred CCCeEEEEECcCCccccceeeEec-cCCCccccccccccCceEEEEEECCCC-CEEEEeeC-C---eEEEEeCCCCcccc
Confidence 999999999999886 66666 4554 89999999998 46778877 6 89999998755778
Q ss_pred EEeeCCCCC---------------eeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec------------------
Q 046451 258 KEFVGHTKG---------------VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP------------------ 304 (719)
Q Consensus 258 ~~~~~h~~~---------------V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~------------------ 304 (719)
..+.+|... +..++|++ ++.+|++|+.||.|+|||+.+++.+. +.
T Consensus 321 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~-~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 398 (447)
T 3dw8_B 321 ETYQVHEYLRSKLCSLYENDCIFDKFECCWNG-SDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVC 398 (447)
T ss_dssp CCEESCGGGTTTHHHHHHTSGGGCCCCEEECT-TSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEE
T ss_pred ceeeccccccccccccccccccccceEEEECC-CCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCcccc
Confidence 888888532 33499999 89999999999999999999987753 22
Q ss_pred ---------------CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeC
Q 046451 305 ---------------AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337 (719)
Q Consensus 305 ---------------~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~ 337 (719)
.+...|..++|+|++ .+||+++.|+ +++|.-
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~-~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 399 ASGKRKKDEISVDSLDFNKKILHTAWHPKE-NIIAVATTNN-LYIFQD 444 (447)
T ss_dssp CSSCCCTTCEEGGGCCTTSCCCEEEECSSS-SEEEEECSSC-EEEEEC
T ss_pred ccCCcccccccccccccCCceeEEEECCCC-CEEEEEecce-eeeecc
Confidence 223468899999999 7999888664 777764
No 69
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.3e-31 Score=297.10 Aligned_cols=289 Identities=18% Similarity=0.298 Sum_probs=237.0
Q ss_pred ccCc-cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 6 GINR-SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 6 ~~~~-V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
|.+. +.++.| ++++|++|+.||.| ++||+..+.... ...+|...|++++|+++
T Consensus 120 h~~~v~~~~~~--~~~~l~sgs~dg~i----------~vwd~~~~~~~~-----~~~~h~~~V~~l~~~~~--------- 173 (464)
T 3v7d_B 120 HMTSVITCLQF--EDNYVITGADDKMI----------RVYDSINKKFLL-----QLSGHDGGVWALKYAHG--------- 173 (464)
T ss_dssp CSSSCEEEEEE--ETTEEEEEETTSCE----------EEEETTTTEEEE-----EECCCSSCEEEEEECST---------
T ss_pred CCCCcEEEEEE--CCCEEEEEcCCCcE----------EEEECCCCcEEE-----EEeCCCcCEEEEEEcCC---------
Confidence 3344 355555 67899999988877 889887554322 23469999999999987
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeC-CCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNS-FTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp-~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
.+|++|+.||.|++||+ .++ ..+..+.+|.+.|.+++|++ .++++|++++.||.|++||+.+........
T Consensus 174 ~~l~s~s~dg~i~vwd~------~~~---~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~ 244 (464)
T 3v7d_B 174 GILVSGSTDRTVRVWDI------KKG---CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHG 244 (464)
T ss_dssp TEEEEEETTSCEEEEET------TTT---EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC----
T ss_pred CEEEEEeCCCCEEEEEC------CCC---cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccccccc
Confidence 48999999999999999 555 77888999999999999985 266899999999999999999876443210
Q ss_pred C----------------ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECC
Q 046451 164 P----------------LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNP 227 (719)
Q Consensus 164 ~----------------l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp 227 (719)
. +.....+|...|.++.. ++ .+|++++.||.|++||+++++.+..+. .|...|.+++|++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~ 320 (464)
T 3v7d_B 245 EEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG--HG-NIVVSGSYDNTLIVWDVAQMKCLYILS-GHTDRIYSTIYDH 320 (464)
T ss_dssp --CCSSEEESCGGGCTTEEEEECCCSSCEEEEEE--ET-TEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEET
T ss_pred ccCCcceEeeccCCCeEEEEEccCccceEEEEcC--CC-CEEEEEeCCCeEEEEECCCCcEEEEec-CCCCCEEEEEEcC
Confidence 0 01123456777887754 44 589999999999999999999999988 7999999999999
Q ss_pred CCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC
Q 046451 228 DVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT 307 (719)
Q Consensus 228 ~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~ 307 (719)
++ ..+++++.|+ .|++||++++ +.+..+.+|...|.+++|++ .+|++++.||.|++||+.+++....+. +.
T Consensus 321 ~~-~~l~sg~~dg---~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~ 391 (464)
T 3v7d_B 321 ER-KRCISASMDT---TIRIWDLENG-ELMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYH-HT 391 (464)
T ss_dssp TT-TEEEEEETTS---CEEEEETTTT-EEEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEE-CT
T ss_pred CC-CEEEEEeCCC---cEEEEECCCC-cEEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECCCCceeeeec-CC
Confidence 98 5789999998 8999999875 67888999999999999974 799999999999999999988776664 55
Q ss_pred CCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 308 NWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 308 ~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
..+..++|++++ .+|++++ ||.|+|||+++++.+.
T Consensus 392 ~~~~~~~~~~~~-~~l~~~~-dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 392 NLSAITTFYVSD-NILVSGS-ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp TCCCEEEEEECS-SEEEEEE-TTEEEEEETTTCCEEE
T ss_pred CCccEEEEEeCC-CEEEEec-CCeEEEEECCCCcEEe
Confidence 568888999998 7999988 9999999999998875
No 70
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.4e-32 Score=302.82 Aligned_cols=257 Identities=18% Similarity=0.269 Sum_probs=205.6
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
..|...|+||+|+|... .+||+|+.||.|+|||+.. .+. .....+.+|.+.|++|+|+|.++++|+
T Consensus 116 ~~~~~~V~~l~~~P~~~-------~~lasGs~dg~i~lWd~~~----~~~---~~~~~~~gH~~~V~~l~f~p~~~~~l~ 181 (435)
T 4e54_B 116 APFDRRATSLAWHPTHP-------STVAVGSKGGDIMLWNFGI----KDK---PTFIKGIGAGGSITGLKFNPLNTNQFY 181 (435)
T ss_dssp EECSSCEEEEEECSSCT-------TCEEEEETTSCEEEECSSC----CSC---CEEECCCSSSCCCCEEEECSSCTTEEE
T ss_pred CCCCCCEEEEEEeCCCC-------CEEEEEeCCCEEEEEECCC----CCc---eeEEEccCCCCCEEEEEEeCCCCCEEE
Confidence 35788899999999643 6999999999999999843 112 445567789999999999987789999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
+|+.||+|+|||+++.... . + .....+...+.+++|++++ .+|++|+.||.|++||++. +.+..+. .|...|
T Consensus 182 s~s~D~~v~iwd~~~~~~~-~---~-~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~-~~~~~~~-~h~~~v 253 (435)
T 4e54_B 182 ASSMEGTTRLQDFKGNILR-V---F-ASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMDG-KELWNLR-MHKKKV 253 (435)
T ss_dssp EECSSSCEEEEETTSCEEE-E---E-ECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESSS-CBCCCSB-CCSSCE
T ss_pred EEeCCCEEEEeeccCCcee-E---E-eccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccCc-ceeEEEe-cccceE
Confidence 9999999999999764322 1 1 1122344578899999997 6999999999999999974 5566666 789999
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCc--eEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSP--VKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~--~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
.+++|+|++..+|++++.|+ +|+|||+++.... +....+|...|++++|++ ++.+|++++.||.|+|||+.+++
T Consensus 254 ~~v~~~p~~~~~~~s~s~d~---~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 254 THVALNPCCDWFLATASVDQ---TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp EEEEECTTCSSEEEEEETTS---BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-TSSEEEEEESSSCEEEEESSSSS
T ss_pred EeeeecCCCceEEEEecCcc---eeeEEecccccccceEEEeeeccccccceeECC-CCCeeEEEcCCCEEEEEECCCCc
Confidence 99999999988999999998 9999999875422 233467999999999999 99999999999999999999998
Q ss_pred EEEEecCCCC------CeEEeEEcCCCCCEEEEEe------------CCCcEEEEeCCCCcccc
Q 046451 299 IVSELPAGTN------WNFDIHWYPKIPGVISASS------------FDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 299 ~~~~l~~h~~------~v~~l~~spdg~~~las~s------------~Dg~I~iwd~~~~~~~~ 344 (719)
....+..|.. .+..+.|++++ .++++++ .++.|+|||+.+++.+.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~ 392 (435)
T 4e54_B 330 CPLGLIPHPHRHFQHLTPIKAAWHPRY-NLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMC 392 (435)
T ss_dssp SEEEECCCCCCCCSSSCCCBCEECSSS-SCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEE
T ss_pred cceEEecccccccccceeEEEEEcCCC-CEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEE
Confidence 8877766543 24456778777 3444443 34679999999988765
No 71
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=9.1e-32 Score=286.53 Aligned_cols=253 Identities=17% Similarity=0.267 Sum_probs=205.0
Q ss_pred cCCCCCceeeee-----cC-CCCCCCCCccceEEEEcCCCcEEEEcCCccccC-CCCCCCCceeeeccccCCEEEEEEeC
Q 046451 61 SPSSERFNRLAW-----GK-NGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISS-GETGGNPLIAHLSRHKGPVRGLEFNS 133 (719)
Q Consensus 61 ~~~~~~V~~l~~-----sp-~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~-~~~~~~~~~~~l~~h~~~V~~l~fsp 133 (719)
.+|.+.|++++| ++ ++ .+|++|+.|++|+|||+...... ..+ .....+.+|...|.+++|++
T Consensus 18 ~gH~~~V~~~~~~~s~~~~~d~--------~~l~sgs~D~~v~iWd~~~~~~~~~~~---~~~~~l~~h~~~V~~~~~~~ 86 (343)
T 2xzm_R 18 EGHSDWVTSIVAGFSQKENEDS--------PVLISGSRDKTVMIWKLYEEEQNGYFG---IPHKALTGHNHFVSDLALSQ 86 (343)
T ss_dssp ECCSSCEEEEEECCCSSTTCCC--------CEEEEEETTSCEEEEEECSSCCSSBSE---EEEEEECCCSSCEEEEEECS
T ss_pred ccchhhhhheeeEEEeecCCCC--------CEEEEEcCCCEEEEEECCcCCcccccc---cccchhccCCCceEEEEECC
Confidence 469999999999 55 55 79999999999999998532110 011 34567889999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec
Q 046451 134 FTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS 213 (719)
Q Consensus 134 ~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~ 213 (719)
++.+|++++.|++|+|||+.+++.... + .+|...|.+++|++++ .+|++++.|++|++||+.... ...+.
T Consensus 87 -~~~~l~s~s~D~~v~lwd~~~~~~~~~---~----~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~-~~~~~ 156 (343)
T 2xzm_R 87 -ENCFAISSSWDKTLRLWDLRTGTTYKR---F----VGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGEC-KFSSA 156 (343)
T ss_dssp -STTEEEEEETTSEEEEEETTSSCEEEE---E----ECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSCE-EEECC
T ss_pred -CCCEEEEEcCCCcEEEEECCCCcEEEE---E----cCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCCc-eeeee
Confidence 889999999999999999998765444 2 3578899999999997 589999999999999998443 33222
Q ss_pred --CCCCCceeEEEECCCCC---------cEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEE
Q 046451 214 --ESIKRRCSVLQWNPDVA---------TQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLT 282 (719)
Q Consensus 214 --~~~~~~i~~l~~sp~g~---------~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~s 282 (719)
..|...|.+++|++++. .+|++++.|+ .|++||.+ ......+.+|...|.+++|++ ++++|++
T Consensus 157 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~---~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~-~g~~l~s 230 (343)
T 2xzm_R 157 EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDG---RLKVWNTN--FQIRYTFKAHESNVNHLSISP-NGKYIAT 230 (343)
T ss_dssp TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTS---EEEEEETT--TEEEEEEECCSSCEEEEEECT-TSSEEEE
T ss_pred cccCCCceeeeeeeccccccccccCCCCCEEEEEcCCC---EEEEEcCC--CceeEEEcCccccceEEEECC-CCCEEEE
Confidence 15788899999999873 5799999998 99999953 355678889999999999999 9999999
Q ss_pred EeCCCcEEEEECCC-CeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 283 CAKDNRTICWDTVS-GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 283 gs~Dg~I~iwd~~~-~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
|+.||.|+|||+.. ......+. +...|.+++|+|++ .+|+++ .|+.|+|||+.+++..
T Consensus 231 gs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~-~~la~~-~d~~v~iw~~~~~~~~ 289 (343)
T 2xzm_R 231 GGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKL-QWVAVG-TDQGVKIFNLMTQSKA 289 (343)
T ss_dssp EETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSS-CEEEEE-ESSCEEEEESSSCCSC
T ss_pred EcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCC-CEEEEE-CCCCEEEEEeCCCCCC
Confidence 99999999999944 44444443 44569999999998 677655 5889999999887653
No 72
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.5e-32 Score=281.60 Aligned_cols=253 Identities=15% Similarity=0.254 Sum_probs=203.6
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCC--CCCCCCC
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKN--GSGSEDF 82 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~--g~~~~~~ 82 (719)
.|.+.|.+++|++||++||+|+.||.| +|||+....... +....+|...|++++|+++ +
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D~~v----------~iw~~~~~~~~~---~~~l~gH~~~V~~v~~s~~~~g------ 67 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSDKTI----------KIFEVEGETHKL---IDTLTGHEGPVWRVDWAHPKFG------ 67 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCE----------EEEEBCSSCBCC---CEEECCCSSCEEEEEECCGGGC------
T ss_pred CCcCceEEEEECCCCCEEEEEeCCCEE----------EEEecCCCCcEE---EEEEccccCCeEEEEecCCCcC------
Confidence 577899999999999999999988877 889987432111 1233579999999999864 4
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC-CCEEEEEeCCCcEEEEcCCCCCCCCc
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT-PNLLASGADDGEICIWDLSAPAEPSH 161 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~-~~~lasgs~dg~I~iwdl~~~~~~~~ 161 (719)
.+|++|+.||+|+|||+.. + ....+..+..|...|.+++|++++ +.+|++++.|+.|++||+.+......
T Consensus 68 --~~l~s~s~D~~v~iWd~~~------~-~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~ 138 (297)
T 2pm7_B 68 --TILASCSYDGKVMIWKEEN------G-RWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSP 138 (297)
T ss_dssp --SEEEEEETTTEEEEEEBSS------S-CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCC
T ss_pred --CEEEEEcCCCEEEEEEcCC------C-ceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceee
Confidence 6999999999999999843 2 113556778899999999999932 78999999999999999987643211
Q ss_pred cCCccCCCCCCCCCeEEEEecCCC------------CcEEEEEeCCCcEEEEECCCCc----eeEEecCCCCCceeEEEE
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKV------------QHILASTSYNGTTVVWDLKKQK----PVISFSESIKRRCSVLQW 225 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g------------~~~l~s~s~dg~I~iwd~~~~~----~~~~~~~~~~~~i~~l~~ 225 (719)
.....|...|.+++|++++ ..+|++|+.|++|++||+++++ ....+. .|...|.+++|
T Consensus 139 -----~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~H~~~V~~v~~ 212 (297)
T 2pm7_B 139 -----IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAW 212 (297)
T ss_dssp -----EEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEE
T ss_pred -----eeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec-CCCCceEEEEE
Confidence 1123577899999999873 3589999999999999998766 455666 79999999999
Q ss_pred CCCC--CcEEEEEeCCCCCCcEEEEecCCCCCc--eEEe--eCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 226 NPDV--ATQLVVASDEDSSPALRLWDMRNTMSP--VKEF--VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 226 sp~g--~~~l~~~s~d~~~~~I~lwDl~~~~~~--~~~~--~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
+|++ ..+|++++.|+ +|+|||+++.... ...+ ..|...|.+++|++ ++++|++++.|+.|+||+..
T Consensus 213 sp~~~~~~~las~s~D~---~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 213 SPTVLLRSYMASVSQDR---TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CCCCSSSEEEEEEETTS---CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECS-SSCCEEEEETTSCEEEEEEC
T ss_pred CCCCCCceEEEEEECCC---cEEEEEeCCCCCccceeeeecccCCCcEEEEEECC-CCCEEEEEcCCCcEEEEEEC
Confidence 9996 46899999998 9999999764321 2233 46788999999999 99999999999999999976
No 73
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.2e-31 Score=281.53 Aligned_cols=257 Identities=18% Similarity=0.262 Sum_probs=215.3
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
..+|.+.|++|+|+|++. ++|++|+.||+|+|||+..... ... .....+.+|...|.+++|++ ++++|
T Consensus 34 L~GH~~~V~~v~~sp~~~-------~~l~S~s~D~~i~vWd~~~~~~-~~~---~~~~~l~~h~~~V~~~~~s~-dg~~l 101 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFP-------DMILSASRDKTIIMWKLTRDET-NYG---IPQRALRGHSHFVSDVVISS-DGQFA 101 (340)
T ss_dssp ECCCSSCEEEEEECTTCT-------TEEEEEETTSCEEEEEECCSSS-CSE---EEEEEECCCSSCEEEEEECT-TSSEE
T ss_pred ECCccCCEEEEEEeCCCC-------CEEEEEcCCCeEEEEECCCCCc-ccc---eeeEEEeCCCCCEEEEEECC-CCCEE
Confidence 357999999999999843 6999999999999999854221 112 45677889999999999999 89999
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR 219 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~ 219 (719)
++++.|+.|++|+.......... ..+...+..+.+++++ .+|++++.|+.+++||+............|...
T Consensus 102 ~s~~~d~~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~ 173 (340)
T 4aow_A 102 LSGSWDGTLRLWDLTTGTTTRRF-------VGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEW 173 (340)
T ss_dssp EEEETTSEEEEEETTTTEEEEEE-------ECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSSCSSC
T ss_pred EEEcccccceEEeecccceeeee-------cCCCCceeEEEEeecC-ccceeecCCCeEEEEEeCCCceEEEEeccccCc
Confidence 99999999999999876544331 2345578889999986 589999999999999998776655555478899
Q ss_pred eeEEEECCCCCc-EEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 220 CSVLQWNPDVAT-QLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 220 i~~l~~sp~g~~-~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
+..++|++++.. ++++++.|+ .|++||+++. +.+..+.+|...|++++|++ ++++|++|+.||.|+|||+++++
T Consensus 174 v~~~~~~~~~~~~~~~s~~~d~---~i~i~d~~~~-~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 174 VSCVRFSPNSSNPIIVSCGWDK---LVKVWNLANC-KLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp EEEEEECSCSSSCEEEEEETTS---CEEEEETTTT-EEEEEECCCSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTE
T ss_pred ccceEEccCCCCcEEEEEcCCC---EEEEEECCCC-ceeeEecCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCc
Confidence 999999988644 567888887 8999999875 66788899999999999999 99999999999999999999999
Q ss_pred EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 299 ~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
.+..+..+. .|.++.|++++ . +++++.|+.|+|||++++....
T Consensus 249 ~~~~~~~~~-~v~~~~~~~~~-~-~~~~~~d~~i~iwd~~~~~~~~ 291 (340)
T 4aow_A 249 HLYTLDGGD-IINALCFSPNR-Y-WLCAATGPSIKIWDLEGKIIVD 291 (340)
T ss_dssp EEEEEECSS-CEEEEEECSSS-S-EEEEEETTEEEEEETTTTEEEE
T ss_pred eeeeecCCc-eEEeeecCCCC-c-eeeccCCCEEEEEECCCCeEEE
Confidence 999887664 59999999987 4 4555669999999999887655
No 74
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-32 Score=307.31 Aligned_cols=321 Identities=12% Similarity=0.076 Sum_probs=225.1
Q ss_pred CCCCCceeeeecCCCCCCC-CCccce-------------------EEEEcCCCcEEEEcCCccccCCCCCC-CCceeeec
Q 046451 62 PSSERFNRLAWGKNGSGSE-DFSLGL-------------------VAGGLVDGSIDIWNPLSLISSGETGG-NPLIAHLS 120 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~-~~~~~~-------------------lasgs~dg~I~lwd~~~~~~~~~~~~-~~~~~~l~ 120 (719)
.+.+.|.+|+|+|++.+.. ....++ |++++.|++|+|||+.. +.. ......+.
T Consensus 131 ~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~------~~~~~~~~~~l~ 204 (524)
T 2j04_B 131 NVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNT------STLHCVKVQTIV 204 (524)
T ss_dssp ECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEET------TTCCEEEEEEEE
T ss_pred ECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccC------CCCCceEEEEEE
Confidence 3577899999998852110 000023 44566889999999842 200 01124466
Q ss_pred cccCCEEEEEEeCC-----CCCEEEEEeCCCcEEEEcCCCCCCCC----ccCCccCCCCCCCCCeEEEEecCCCCcEEEE
Q 046451 121 RHKGPVRGLEFNSF-----TPNLLASGADDGEICIWDLSAPAEPS----HFPPLRGNGSAAQGEISFVSWNSKVQHILAS 191 (719)
Q Consensus 121 ~h~~~V~~l~fsp~-----~~~~lasgs~dg~I~iwdl~~~~~~~----~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s 191 (719)
.|.+.|.+++|+|. ++.+||+++.||+|+|||+.+..... .+.........|...|++++|+++ ..|++
T Consensus 205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~~las 282 (524)
T 2j04_B 205 HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--TTVVC 282 (524)
T ss_dssp ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--SEEEE
T ss_pred ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--CeEEE
Confidence 78899999999994 25799999999999999998764321 000001123457789999999986 37999
Q ss_pred EeCCCcEEEEECCCCc-eeEEecCCCCCceeEE--EECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCC--C
Q 046451 192 TSYNGTTVVWDLKKQK-PVISFSESIKRRCSVL--QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTK--G 266 (719)
Q Consensus 192 ~s~dg~I~iwd~~~~~-~~~~~~~~~~~~i~~l--~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~--~ 266 (719)
|+.||+|++||+++++ ....+. .|...|.+| .|++++..+|++++.|+ +|+|||+++. +.+..+.+|.. .
T Consensus 283 gs~DgtV~lWD~~~~~~~~~~~~-~H~~~V~sv~~~~s~~g~~~laS~S~D~---tvklWD~~~~-~~~~~~~~~~~~~~ 357 (524)
T 2j04_B 283 GFKNGFVAEFDLTDPEVPSFYDQ-VHDSYILSVSTAYSDFEDTVVSTVAVDG---YFYIFNPKDI-ATTKTTVSRFRGSN 357 (524)
T ss_dssp EETTSEEEEEETTBCSSCSEEEE-CSSSCEEEEEEECCTTSCCEEEEEETTS---EEEEECGGGH-HHHCEEEEECSCCS
T ss_pred EeCCCEEEEEECCCCCCceEEee-cccccEEEEEEEcCCCCCeEEEEeccCC---eEEEEECCCC-CcccccccccccCc
Confidence 9999999999999764 344555 799999999 57787656899999998 9999999875 44556666653 5
Q ss_pred eeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccC
Q 046451 267 VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVG 346 (719)
Q Consensus 267 V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~ 346 (719)
|.+++|+| ++..|++++.|++|+|||++++.++..+.+|.+.|++|+|+|++ .+|++|+.||+|+|||+..+......
T Consensus 358 v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g-~~l~Sgs~Dgtv~lwd~~~~~~~~~~ 435 (524)
T 2j04_B 358 LVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLH-PMVLAGSADGSLIITNAARRLLHGIK 435 (524)
T ss_dssp CCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSC-CBCEEEETTTEEECCBSCSSTTTCC-
T ss_pred ccceEeCC-CcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCC-CeEEEEECCCEEEEEechHhhccccc
Confidence 88999999 88899999999999999999999888889999999999999999 78999999999999998765221100
Q ss_pred CCCCCCCCccCcceecC--CCceeeeeCCcEEEEccC--------CCCCccccccccccceeeccCCCCC
Q 046451 347 DSNFSAAPLRAPKWYKR--PAGASFGFGGKLVSFHPK--------SSAGHTSENSQHAPVHGVDQSKYGM 406 (719)
Q Consensus 347 ~~~~~~~~~~~p~w~~~--~~~~s~s~~Gklv~~~~~--------~~~~~~~~~~~~~~v~~v~~s~~~~ 406 (719)
.. ..|... ...++|+.+|+++.+... .+.....+.+|.+.|.+|++||++.
T Consensus 436 ~~---------~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~ 496 (524)
T 2j04_B 436 NS---------SATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSA 496 (524)
T ss_dssp --------------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTT
T ss_pred cC---------ccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCC
Confidence 00 001111 113678888886655431 1334556899999999999999975
No 75
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.4e-31 Score=294.71 Aligned_cols=277 Identities=19% Similarity=0.338 Sum_probs=229.7
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceE
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLV 87 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~l 87 (719)
..|.+++| |+++|++|+.||.| ++||+..++.... ..+|...|.+++| ++ ++|
T Consensus 134 ~~v~~~~~--d~~~l~~g~~dg~i----------~iwd~~~~~~~~~-----~~~h~~~v~~l~~--~~--------~~l 186 (435)
T 1p22_A 134 KGVYCLQY--DDQKIVSGLRDNTI----------KIWDKNTLECKRI-----LTGHTGSVLCLQY--DE--------RVI 186 (435)
T ss_dssp CCEEEEEC--CSSEEEEEESSSCE----------EEEESSSCCEEEE-----ECCCSSCEEEEEC--CS--------SEE
T ss_pred CcEEEEEE--CCCEEEEEeCCCeE----------EEEeCCCCeEEEE-----EcCCCCcEEEEEE--CC--------CEE
Confidence 45777766 89999999988877 8899875543322 2468899999999 44 699
Q ss_pred EEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccC
Q 046451 88 AGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRG 167 (719)
Q Consensus 88 asgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~ 167 (719)
++|+.||.|++||+ .++ +.+..+..|...|.+++|++ ++|++|+.||.|++||+.+....... .
T Consensus 187 ~sg~~dg~i~vwd~------~~~---~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~----~ 250 (435)
T 1p22_A 187 ITGSSDSTVRVWDV------NTG---EMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLR----R 250 (435)
T ss_dssp EEEETTSCEEEEES------SSC---CEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEE----E
T ss_pred EEEcCCCeEEEEEC------CCC---cEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceee----e
Confidence 99999999999999 556 78888999999999999964 69999999999999999887654221 1
Q ss_pred CCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEE
Q 046451 168 NGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRL 247 (719)
Q Consensus 168 ~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~l 247 (719)
...+|...|.+++| ++ .+|++++.||.|++||+++++.+..+. .|...|.++.|+ + .++++++.|+ .|++
T Consensus 251 ~~~~~~~~v~~~~~--~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~--~-~~l~~g~~dg---~i~i 320 (435)
T 1p22_A 251 VLVGHRAAVNVVDF--DD-KYIVSASGDRTIKVWNTSTCEFVRTLN-GHKRGIACLQYR--D-RLVVSGSSDN---TIRL 320 (435)
T ss_dssp EECCCSSCEEEEEE--ET-TEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEEE--T-TEEEEEETTS---CEEE
T ss_pred EecCCCCcEEEEEe--CC-CEEEEEeCCCeEEEEECCcCcEEEEEc-CCCCcEEEEEeC--C-CEEEEEeCCC---eEEE
Confidence 23457889999999 33 589999999999999999999999988 789999999995 3 5799999998 8999
Q ss_pred EecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe---------EEEEecCCCCCeEEeEEcCC
Q 046451 248 WDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE---------IVSELPAGTNWNFDIHWYPK 318 (719)
Q Consensus 248 wDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~---------~~~~l~~h~~~v~~l~~spd 318 (719)
||++++ +.+..+.+|...|.+++| ++.+|++|+.||.|++||+.+++ .+..+.+|...|++++| +
T Consensus 321 wd~~~~-~~~~~~~~h~~~v~~~~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~ 394 (435)
T 1p22_A 321 WDIECG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--D 394 (435)
T ss_dssp EETTTC-CEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--C
T ss_pred EECCCC-CEEEEEeCCcCcEEEEEe---cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--C
Confidence 999875 778889999999999999 56899999999999999997765 88899999999999999 5
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 319 IPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 319 g~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+ .+|++++.||.|+|||+.+.....
T Consensus 395 ~-~~l~s~s~Dg~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 395 E-FQIVSSSHDDTILIWDFLNDPAAQ 419 (435)
T ss_dssp S-SCEEECCSSSEEEEEC--------
T ss_pred C-CEEEEEeCCCEEEEEECCCCCCcc
Confidence 5 689999999999999998876543
No 76
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4e-32 Score=285.92 Aligned_cols=254 Identities=16% Similarity=0.258 Sum_probs=201.9
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCC--CCCCCCC
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKN--GSGSEDF 82 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~--g~~~~~~ 82 (719)
.|.+.|++++|++||++||+|+.||.| +|||+..+... .+....+|...|++++|+++ +
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs~D~~v----------~lwd~~~~~~~---~~~~l~gH~~~V~~v~~~~~~~~------ 71 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCSSDRSV----------KIFDVRNGGQI---LIADLRGHEGPVWQVAWAHPMYG------ 71 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEETTTEE----------EEEEEETTEEE---EEEEEECCSSCEEEEEECCGGGS------
T ss_pred cccCeEEEeeEcCCCCEEEEEeCCCeE----------EEEEecCCCcE---EEEEEcCCCccEEEEEeCCCCCC------
Confidence 577899999999999999999988877 88998754211 12233579999999999863 4
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC-CCEEEEEeCCCcEEEEcCCCCCCCCc
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT-PNLLASGADDGEICIWDLSAPAEPSH 161 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~-~~~lasgs~dg~I~iwdl~~~~~~~~ 161 (719)
.+|++|+.|++|+|||+.+ + .......+.+|...|.+++|++++ +.+|++|+.|+.|++||+........
T Consensus 72 --~~l~s~s~D~~v~iWd~~~------~-~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 72 --NILASCSYDRKVIIWREEN------G-TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp --SCEEEEETTSCEEEECCSS------S-CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE
T ss_pred --CEEEEEECCCEEEEEECCC------C-cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce
Confidence 6999999999999999843 2 114556778899999999999942 78999999999999999987542211
Q ss_pred cCCccCCCCCCCCCeEEEEecCCC----------------CcEEEEEeCCCcEEEEECCCC---ceeEEecCCCCCceeE
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKV----------------QHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSV 222 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g----------------~~~l~s~s~dg~I~iwd~~~~---~~~~~~~~~~~~~i~~ 222 (719)
......|...|.+++|++++ ..+|++++.|++|++||++.. +.+..+. .|...|.+
T Consensus 143 ----~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~-~h~~~V~~ 217 (316)
T 3bg1_A 143 ----KKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE-AHSDWVRD 217 (316)
T ss_dssp ----CCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB-CCSSCEEE
T ss_pred ----eeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc-cCCCceEE
Confidence 11234577789999999873 258999999999999999865 3555566 79999999
Q ss_pred EEECCCC---CcEEEEEeCCCCCCcEEEEecCCCC---CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 223 LQWNPDV---ATQLVVASDEDSSPALRLWDMRNTM---SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 223 l~~sp~g---~~~l~~~s~d~~~~~I~lwDl~~~~---~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
++|+|++ ..+|++++.|+ +|+|||+++.. .....+..|...|.+++|+| ++++|++++.|+.|+||+..
T Consensus 218 v~~sp~~~~~~~~las~s~D~---~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp-~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 218 VAWAPSIGLPTSTIASCSQDG---RVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSI-TANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EECCCCSSCSCCEEEEEETTC---EEEEEECSSTTCCCCBCCEEEECSSCEEEEEECT-TTCCEEEEESSSCEEEEEEC
T ss_pred EEecCCCCCCCceEEEEcCCC---eEEEEEccCccccchhhhhhhcCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEEC
Confidence 9999986 35899999998 99999997621 22345667889999999999 89999999999999999975
No 77
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.1e-31 Score=292.65 Aligned_cols=304 Identities=15% Similarity=0.220 Sum_probs=248.2
Q ss_pred EEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCC
Q 046451 14 AFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVD 93 (719)
Q Consensus 14 afSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~d 93 (719)
+++++|++|++|+.||.| ++||+..+..... ..+|...|.+++|+. ++|++|+.|
T Consensus 124 ~~~~~g~~l~sg~~dg~i----------~vwd~~~~~~~~~-----~~~h~~~v~~~~~~~----------~~l~s~~~d 178 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTL----------KVWSAVTGKCLRT-----LVGHTGGVWSSQMRD----------NIIISGSTD 178 (445)
T ss_dssp EEEEETTEEEEEETTSCE----------EEEETTTCCEEEE-----CCCCSSCEEEEEEET----------TEEEEEETT
T ss_pred EEEEcCCEEEEEECCCcE----------EEEECCCCcEEEE-----EcCCCCCEEEEEecC----------CEEEEEeCC
Confidence 355579999999988877 8899876543322 346899999999973 599999999
Q ss_pred CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCC
Q 046451 94 GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQ 173 (719)
Q Consensus 94 g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~ 173 (719)
|.|++||+ .++ +.+..+.+|...|.++.|+ +++|++|+.||.|++||+.+++....+ ..|.
T Consensus 179 g~i~vwd~------~~~---~~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~i~~wd~~~~~~~~~~-------~~~~ 239 (445)
T 2ovr_B 179 RTLKVWNA------ETG---ECIHTLYGHTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQCLHVL-------MGHV 239 (445)
T ss_dssp SCEEEEET------TTT---EEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEESSSCCEEEEE-------ECCS
T ss_pred CeEEEEEC------CcC---cEEEEECCCCCcEEEEEec---CCEEEEEeCCCEEEEEECCCCcEEEEE-------cCCc
Confidence 99999999 555 7788899999999999995 478999999999999999987755442 3477
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCC
Q 046451 174 GEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNT 253 (719)
Q Consensus 174 ~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~ 253 (719)
..|.+++| ++ .+|++++.||.|++||+++++.+..+. .|...|.+++| ++ ..+++++.|+ .|++||+++.
T Consensus 240 ~~v~~~~~--~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~--~~-~~l~~~~~d~---~i~i~d~~~~ 309 (445)
T 2ovr_B 240 AAVRCVQY--DG-RRVVSGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF--DG-IHVVSGSLDT---SIRVWDVETG 309 (445)
T ss_dssp SCEEEEEE--CS-SCEEEEETTSCEEEEEGGGTEEEEEEC-CCSSCEEEEEE--CS-SEEEEEETTS---CEEEEETTTC
T ss_pred ccEEEEEE--CC-CEEEEEcCCCEEEEEECCCCcEeEEec-CCCCceEEEEE--CC-CEEEEEeCCC---eEEEEECCCC
Confidence 89999999 43 589999999999999999999999888 78999999999 44 5789999988 8999999875
Q ss_pred CCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC---CCCCeEEeEEcCCCCCEEEEEeCCC
Q 046451 254 MSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA---GTNWNFDIHWYPKIPGVISASSFDG 330 (719)
Q Consensus 254 ~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~---h~~~v~~l~~spdg~~~las~s~Dg 330 (719)
+.+..+.+|...+.++.++ +++|++++.||.|++||+++++.+..+.. |...|.+++|+ + .+|++++.||
T Consensus 310 -~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~s~~~dg 382 (445)
T 2ovr_B 310 -NCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--K-NFVITSSDDG 382 (445)
T ss_dssp -CEEEEECCCCSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--S-SEEEEEETTS
T ss_pred -CEEEEEcCCcccEEEEEEe---CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--C-CEEEEEeCCC
Confidence 6788899999999998885 47999999999999999999999999886 88889999996 3 6899999999
Q ss_pred cEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCCC
Q 046451 331 KIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 331 ~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~~ 384 (719)
.|+|||+.+++.+........ ..... ....++|+.+|.+++....++.
T Consensus 383 ~v~iwd~~~~~~~~~~~~~~~-~~~~~-----~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 383 TVKLWDLKTGEFIRNLVTLES-GGSGG-----VVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EEEEEETTTCCEEEEEEECTT-GGGTC-----EEEEEEECSSEEEEEEECSSSS
T ss_pred eEEEEECCCCceeeeeecccc-CCCCc-----eEEEEEecCCEEEEEEcccCCC
Confidence 999999999887653210000 00011 1234788888888888766653
No 78
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.2e-31 Score=311.07 Aligned_cols=256 Identities=20% Similarity=0.301 Sum_probs=216.0
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
..|.+.|++|+|++++. ++|++|+.||+|+|||+..... ..+ .....+.+|...|.+++|++ ++++|+
T Consensus 379 ~~H~~~V~~v~~~~~~~-------~~l~s~s~D~~i~~W~~~~~~~-~~~---~~~~~~~~h~~~v~~v~~s~-~g~~l~ 446 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNA-------DIIVSASRDKSIILWKLTKDDK-AYG---VAQRRLTGHSHFVEDVVLSS-DGQFAL 446 (694)
T ss_dssp ECCSSCEEEEECCTTCC-------SEEEEEETTSEEEEEECCCSTT-CSC---EEEEEEECCSSCEEEEEECT-TSSEEE
T ss_pred ccCCceeEEEEecCCCC-------CEEEEEeCCCcEEEEEccCCCc-ccc---cccceecCCCCcEEEEEECC-CCCEEE
Confidence 46999999999998753 6999999999999999853211 111 34567889999999999999 889999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec--CCCCC
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS--ESIKR 218 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~--~~~~~ 218 (719)
+|+.||+|+|||+.++..... + .+|...|.+++|++++ .+|++++.|++|++||+.......... ..|..
T Consensus 447 sgs~Dg~v~vwd~~~~~~~~~---~----~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~ 518 (694)
T 3dm0_A 447 SGSWDGELRLWDLAAGVSTRR---F----VGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRD 518 (694)
T ss_dssp EEETTSEEEEEETTTTEEEEE---E----ECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSTTSCSS
T ss_pred EEeCCCcEEEEECCCCcceeE---E----eCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCcceeeccCCCCCCC
Confidence 999999999999988765443 2 3588899999999997 589999999999999987654333222 25788
Q ss_pred ceeEEEECCCCC-cEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC
Q 046451 219 RCSVLQWNPDVA-TQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297 (719)
Q Consensus 219 ~i~~l~~sp~g~-~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~ 297 (719)
.|.+++|++++. ..+++++.|+ +|++||+++. +.+..+.+|...|++++|++ ++++|++|+.||.|+|||+.++
T Consensus 519 ~v~~~~~~~~~~~~~l~s~s~d~---~v~vwd~~~~-~~~~~~~~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~ 593 (694)
T 3dm0_A 519 WVSCVRFSPNTLQPTIVSASWDK---TVKVWNLSNC-KLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEG 593 (694)
T ss_dssp CEEEEEECSCSSSCEEEEEETTS---CEEEEETTTC-CEEEEECCCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTTT
T ss_pred cEEEEEEeCCCCcceEEEEeCCC---eEEEEECCCC-cEEEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCC
Confidence 899999999873 4789999998 9999999875 67788999999999999999 9999999999999999999999
Q ss_pred eEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 298 EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 298 ~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+.+..+..+ ..|.+++|++++ .+|++++ |+.|+|||+++++.+.
T Consensus 594 ~~~~~~~~~-~~v~~~~~sp~~-~~l~~~~-~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 594 KKLYSLEAN-SVIHALCFSPNR-YWLCAAT-EHGIKIWDLESKSIVE 637 (694)
T ss_dssp EEEECCBCS-SCEEEEEECSSS-SEEEEEE-TTEEEEEETTTTEEEE
T ss_pred ceEEEecCC-CcEEEEEEcCCC-cEEEEEc-CCCEEEEECCCCCChh
Confidence 999888665 469999999998 6777666 6779999999988765
No 79
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.2e-32 Score=287.84 Aligned_cols=253 Identities=19% Similarity=0.348 Sum_probs=202.9
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC-CCCEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF-TPNLL 139 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~-~~~~l 139 (719)
.+|...|++++|++++ ++|++|+.|++|+|||+.. + ....+..+.+|.+.|.+++|++. ++++|
T Consensus 10 ~~H~~~V~~v~~s~~g--------~~lasgs~D~~v~lwd~~~------~-~~~~~~~l~gH~~~V~~v~~~~~~~~~~l 74 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYG--------TRLATCSSDRSVKIFDVRN------G-GQILIADLRGHEGPVWQVAWAHPMYGNIL 74 (316)
T ss_dssp ----CCEEEEEECGGG--------CEEEEEETTTEEEEEEEET------T-EEEEEEEEECCSSCEEEEEECCGGGSSCE
T ss_pred ccccCeEEEeeEcCCC--------CEEEEEeCCCeEEEEEecC------C-CcEEEEEEcCCCccEEEEEeCCCCCCCEE
Confidence 4689999999999998 7999999999999999842 2 01346778999999999999752 47899
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCC-CcEEEEEeCCCcEEEEECCCCcee--EEecCCC
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKV-QHILASTSYNGTTVVWDLKKQKPV--ISFSESI 216 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g-~~~l~s~s~dg~I~iwd~~~~~~~--~~~~~~~ 216 (719)
++|+.|++|+|||++++..... ....+|...|++++|++++ ..+|++++.|++|++||++.+... ......|
T Consensus 75 ~s~s~D~~v~iWd~~~~~~~~~-----~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h 149 (316)
T 3bg1_A 75 ASCSYDRKVIIWREENGTWEKS-----HEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAH 149 (316)
T ss_dssp EEEETTSCEEEECCSSSCCCEE-----EEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSS
T ss_pred EEEECCCEEEEEECCCCcceEE-----EEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccc
Confidence 9999999999999987643211 1124578899999999973 368999999999999999876422 2222378
Q ss_pred CCceeEEEECCCC----------------CcEEEEEeCCCCCCcEEEEecCCCC--CceEEeeCCCCCeeEEEeCCCCC-
Q 046451 217 KRRCSVLQWNPDV----------------ATQLVVASDEDSSPALRLWDMRNTM--SPVKEFVGHTKGVIAMSWCPNDS- 277 (719)
Q Consensus 217 ~~~i~~l~~sp~g----------------~~~l~~~s~d~~~~~I~lwDl~~~~--~~~~~~~~h~~~V~~v~~sp~d~- 277 (719)
...+.+++|++++ ..+|++++.|+ +|++||++... ..+..+.+|...|.+++|+| ++
T Consensus 150 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~---~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp-~~~ 225 (316)
T 3bg1_A 150 TIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDN---LIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP-SIG 225 (316)
T ss_dssp SSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTS---BCCEEEECTTSCEEEEECCBCCSSCEEEEECCC-CSS
T ss_pred cCCcceEEEccccCCccccccccccCccccceEEEecCCC---eEEEEEeCCCCccceeeecccCCCceEEEEecC-CCC
Confidence 8899999999973 24789999998 99999997542 35667889999999999999 54
Q ss_pred ---CeEEEEeCCCcEEEEECCCC---e-EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 278 ---SYLLTCAKDNRTICWDTVSG---E-IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 278 ---~~l~sgs~Dg~I~iwd~~~~---~-~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
.+|++++.|++|+|||+.+. + ....+..|...|++++|++++ .+|++++.|++|+||+..
T Consensus 226 ~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 226 LPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITA-NILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTT-CCEEEEESSSCEEEEEEC
T ss_pred CCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEEC
Confidence 78999999999999998762 1 123345688899999999999 799999999999999976
No 80
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4e-31 Score=279.01 Aligned_cols=312 Identities=14% Similarity=0.218 Sum_probs=223.5
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecC--CCCCCCCC
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGK--NGSGSEDF 82 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp--~g~~~~~~ 82 (719)
.|.+.|++++|++|+++||+|+.||.| +|||+........+ ......|...|++++|++ ++
T Consensus 9 gH~~~v~~~~~~~~~~~l~~~~~dg~i----------~iw~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~d~------ 71 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHVATCSSDQHI----------KVFKLDKDTSNWEL-SDSWRAHDSSIVAIDWASPEYG------ 71 (351)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEE----------EEEEECSSSCCEEE-EEEEECCSSCEEEEEECCGGGC------
T ss_pred ccccceeEEEEcCCCCEEEEeeCCCeE----------EEEECCCCCCccee-cceeccCCCcEEEEEEcCCCCC------
Confidence 477899999999999999999988876 88998865433222 223346899999999999 45
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC--CCEEEEEeCCCcEEEEcCCCCCCCC
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT--PNLLASGADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~--~~~lasgs~dg~I~iwdl~~~~~~~ 160 (719)
.+|++|+.||.|++||+..............+..+..|.+.|.+++|++ + +++|++++.||.|++||+.+.+...
T Consensus 72 --~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 148 (351)
T 3f3f_A 72 --RIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLR 148 (351)
T ss_dssp --SEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTT
T ss_pred --CEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhc
Confidence 7999999999999999954322111111244677888999999999999 6 8999999999999999999887655
Q ss_pred ccC------CccCCCCCCCCCeEEEEecCC--CCcEEEEEeCCCcEEEEECCCCce--eEEecCCCCCceeEEEECCCCC
Q 046451 161 HFP------PLRGNGSAAQGEISFVSWNSK--VQHILASTSYNGTTVVWDLKKQKP--VISFSESIKRRCSVLQWNPDVA 230 (719)
Q Consensus 161 ~~~------~l~~~~~~h~~~I~~l~~sp~--g~~~l~s~s~dg~I~iwd~~~~~~--~~~~~~~~~~~i~~l~~sp~g~ 230 (719)
.+. .+......|...+.+++|+++ ...+|++++.|+.+.+|+...++. +..+. .|...|.+++|++++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~~~ 227 (351)
T 3f3f_A 149 SWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLP-GHKSLIRSISWAPSIG 227 (351)
T ss_dssp CCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECC-CCCSCEEEEEECCCSS
T ss_pred cccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecC-CCCcceeEEEECCCCC
Confidence 431 111222356778999999997 236999999999998888887765 55555 7899999999999973
Q ss_pred ---cEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEE----eCCCcEEEEECCCCeEEEEe
Q 046451 231 ---TQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTC----AKDNRTICWDTVSGEIVSEL 303 (719)
Q Consensus 231 ---~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sg----s~Dg~I~iwd~~~~~~~~~l 303 (719)
.+|++++.|+ .|++||++..... .....+...+....++. ....+..+ ..+..+.+|+....+.+..+
T Consensus 228 ~~~~~l~s~~~dg---~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (351)
T 3f3f_A 228 RWYQLIATGCKDG---RIRIFKITEKLSP-LASEESLTNSNMFDNSA-DVDMDAQGRSDSNTEEKAELQSNLQVELLSEH 302 (351)
T ss_dssp CSSEEEEEEETTS---CEEEEEEEECC-----------------------------------------CCSEEEEEEEEE
T ss_pred CcceEEEEEcCCC---eEEEEeCCCCcCc-cccCCcccceeccCCCc-ccccccccccccccceeeeecccccccEEEEE
Confidence 5899999998 8999999865332 22222333333333333 33333333 34456677777778889999
Q ss_pred cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 304 PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 304 ~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
.+|...|++++|++++ .+|++++.||.|+|||+.+++..
T Consensus 303 ~~h~~~v~~~~~s~~~-~~l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 303 DDHNGEVWSVSWNLTG-TILSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp CTTSSCEEEEEECSSS-CCEEEEETTSCEEEEEECTTSCE
T ss_pred ecccccEEEEEEcCCC-CEEEEecCCCcEEEEecCcCcch
Confidence 9999999999999999 79999999999999999987653
No 81
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.6e-31 Score=286.86 Aligned_cols=254 Identities=20% Similarity=0.253 Sum_probs=206.1
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeee--ccccCCEEEEEEeCCCCCE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL--SRHKGPVRGLEFNSFTPNL 138 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l--~~h~~~V~~l~fsp~~~~~ 138 (719)
..|...|++++|++++. .+|++|+.||.|+|||+. ++ .....+ .+|.+.|.+++|+++++++
T Consensus 70 ~~h~~~v~~~~~~~~~~-------~~l~s~~~dg~i~iwd~~------~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~ 133 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHP-------TTVAVGSKGGDIILWDYD------VQ---NKTSFIQGMGPGDAITGMKFNQFNTNQ 133 (383)
T ss_dssp CCCSSCEEEEEECSSCT-------TEEEEEEBTSCEEEEETT------ST---TCEEEECCCSTTCBEEEEEEETTEEEE
T ss_pred cCCCCCEEEEEECCCCC-------CEEEEEcCCCeEEEEeCC------Cc---ccceeeecCCcCCceeEEEeCCCCCCE
Confidence 56889999999999963 599999999999999994 33 344444 4699999999999966789
Q ss_pred EEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCC
Q 046451 139 LASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR 218 (719)
Q Consensus 139 lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~ 218 (719)
|++++.|+.|++||+.+. .... +.. ...+...|.+++|++++ .+|++++.||.|++||+ +++.+..+. .|..
T Consensus 134 l~s~~~d~~i~iwd~~~~-~~~~---~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~-~~~~~~~~~-~h~~ 205 (383)
T 3ei3_B 134 LFVSSIRGATTLRDFSGS-VIQV---FAK-TDSWDYWYCCVDVSVSR-QMLATGDSTGRLLLLGL-DGHEIFKEK-LHKA 205 (383)
T ss_dssp EEEEETTTEEEEEETTSC-EEEE---EEC-CCCSSCCEEEEEEETTT-TEEEEEETTSEEEEEET-TSCEEEEEE-CSSS
T ss_pred EEEEeCCCEEEEEECCCC-ceEE---Eec-cCCCCCCeEEEEECCCC-CEEEEECCCCCEEEEEC-CCCEEEEec-cCCC
Confidence 999999999999999853 2222 221 23356789999999997 59999999999999999 467777777 7999
Q ss_pred ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC---CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 219 RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM---SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 219 ~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~---~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
.|.+++|++++..+|++++.|+ .|++||+++.. ..+..+ +|...|.+++|++.++.+|++++.|+.|+|||++
T Consensus 206 ~v~~~~~~~~~~~~l~s~~~d~---~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~ 281 (383)
T 3ei3_B 206 KVTHAEFNPRCDWLMATSSVDA---TVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSY 281 (383)
T ss_dssp CEEEEEECSSCTTEEEEEETTS---EEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETT
T ss_pred cEEEEEECCCCCCEEEEEeCCC---EEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECC
Confidence 9999999999976899999998 99999998732 344444 6999999999998678999999999999999999
Q ss_pred CCeEEEEecCCC-----------------CCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccccc
Q 046451 296 SGEIVSELPAGT-----------------NWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV 345 (719)
Q Consensus 296 ~~~~~~~l~~h~-----------------~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~ 345 (719)
+++.+..+..|. ..+..++|++++ .+ +++.|+.|+|||+.+++.+..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg-~~--s~s~d~~i~iwd~~~~~~~~~ 345 (383)
T 3ei3_B 282 DWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDD-QL--LLNDKRTIDIYDANSGGLVHQ 345 (383)
T ss_dssp BTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCT-TT--CTTCCCCEEEEETTTCCEEEE
T ss_pred CCccccccccccccccccccceEEeccCCCCceEEEecCCc-cc--ccCCCCeEEEEecCCCceeee
Confidence 887766665443 223446666666 33 677899999999999887653
No 82
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.7e-31 Score=282.65 Aligned_cols=248 Identities=15% Similarity=0.184 Sum_probs=213.6
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasg 142 (719)
|...|++++|++++ ++|++++.||.|++||+. ++ ....+..+..|...|.+++|++ ++++|+++
T Consensus 7 ~~~~i~~~~~s~~~--------~~l~~~~~d~~v~i~~~~------~~-~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~ 70 (372)
T 1k8k_C 7 LVEPISCHAWNKDR--------TQIAICPNNHEVHIYEKS------GN-KWVQVHELKEHNGQVTGVDWAP-DSNRIVTC 70 (372)
T ss_dssp CSSCCCEEEECTTS--------SEEEEECSSSEEEEEEEE------TT-EEEEEEEEECCSSCEEEEEEET-TTTEEEEE
T ss_pred cCCCeEEEEECCCC--------CEEEEEeCCCEEEEEeCC------CC-cEEeeeeecCCCCcccEEEEeC-CCCEEEEE
Confidence 78899999999998 799999999999999984 33 0027788889999999999999 88999999
Q ss_pred eCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce---eEEecCCCCCc
Q 046451 143 ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP---VISFSESIKRR 219 (719)
Q Consensus 143 s~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~---~~~~~~~~~~~ 219 (719)
+.||.|++||+.+.+....+ ....|...|.+++|++++ .+|++++.||.|++||++.++. ...+...|...
T Consensus 71 ~~dg~i~vwd~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~ 144 (372)
T 1k8k_C 71 GTDRNAYVWTLKGRTWKPTL-----VILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRST 144 (372)
T ss_dssp ETTSCEEEEEEETTEEEEEE-----ECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSC
T ss_pred cCCCeEEEEECCCCeeeeeE-----EeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCC
Confidence 99999999999776532221 123467799999999997 6999999999999999998763 34444468899
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC-----------------CCCceEEeeCCCCCeeEEEeCCCCCCeEEE
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRN-----------------TMSPVKEFVGHTKGVIAMSWCPNDSSYLLT 282 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~-----------------~~~~~~~~~~h~~~V~~v~~sp~d~~~l~s 282 (719)
|.+++|++++ .+|++++.|+ .|++||++. ....+..+.+|...|.+++|++ ++++|++
T Consensus 145 i~~~~~~~~~-~~l~~~~~dg---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~ 219 (372)
T 1k8k_C 145 VLSLDWHPNS-VLLAAGSCDF---KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA-NGSRVAW 219 (372)
T ss_dssp EEEEEECTTS-SEEEEEETTS---CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS-SSSEEEE
T ss_pred eeEEEEcCCC-CEEEEEcCCC---CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC-CCCEEEE
Confidence 9999999998 5788999888 899999741 2366778889999999999999 8899999
Q ss_pred EeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 283 CAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 283 gs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
++.|+.|++||+++++.+..+..|...|.+++|++++ .+|+++ .|+.|++|++.+
T Consensus 220 ~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 220 VSHDSTVCLADADKKMAVATLASETLPLLAVTFITES-SLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETT-EEEEEE-TTSSCEEEEEET
T ss_pred EeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCC-CEEEEE-eCCeEEEEEccC
Confidence 9999999999999999999999999999999999998 677777 899999999988
No 83
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.1e-31 Score=287.13 Aligned_cols=260 Identities=12% Similarity=0.248 Sum_probs=216.0
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC----C
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT----P 136 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~----~ 136 (719)
.+|...|++++|++ ++|++|+.||.|+|||+........ ...+..+..|...|.+++|++ + +
T Consensus 13 ~~h~~~i~~~~~~~----------~~l~s~~~dg~i~iw~~~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~-~~~~~g 78 (397)
T 1sq9_A 13 KAHDADIFSVSACN----------SFTVSCSGDGYLKVWDNKLLDNENP---KDKSYSHFVHKSGLHHVDVLQ-AIERDA 78 (397)
T ss_dssp SCSSSCEEEEEECS----------SEEEEEETTSEEEEEESBCCTTCCG---GGGEEEEECCTTCEEEEEEEE-EEETTT
T ss_pred hhhhcCeEEEEecC----------CeEEEEcCCCEEEEEECCCcccccC---CCcceEEecCCCcEEEEEEec-ccccCC
Confidence 56999999999987 3899999999999999954211011 136788889999999999999 6 8
Q ss_pred ---CEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCC-----CCCeEEEEec----CCCCcE-EEEEeCCCcEEEEEC
Q 046451 137 ---NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAA-----QGEISFVSWN----SKVQHI-LASTSYNGTTVVWDL 203 (719)
Q Consensus 137 ---~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h-----~~~I~~l~~s----p~g~~~-l~s~s~dg~I~iwd~ 203 (719)
++|++++.||.|++||+.+.+..... .......| ...|.+++|+ +++ .+ |++++.||.|++||+
T Consensus 79 ~~~~~l~s~~~dg~i~iw~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~ 155 (397)
T 1sq9_A 79 FELCLVATTSFSGDLLFYRITREDETKKV--IFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKF 155 (397)
T ss_dssp EEEEEEEEEETTSCEEEEEEEECTTTCCE--EEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEE
T ss_pred ccccEEEEEcCCCCEEEEEccCCcccccc--cceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeC
Confidence 89999999999999999987751110 01111234 4789999999 887 47 999999999999999
Q ss_pred CC------CceeE-----Eec------CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC---C
Q 046451 204 KK------QKPVI-----SFS------ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG---H 263 (719)
Q Consensus 204 ~~------~~~~~-----~~~------~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~---h 263 (719)
++ ++.+. .+. ..+...|.+++|++++ ++++++.++ .|++||+++. +.+..+.. |
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg---~i~i~d~~~~-~~~~~~~~~~~h 229 (397)
T 1sq9_A 156 HPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNG---TVQISELSTL-RPLYNFESQHSM 229 (397)
T ss_dssp ESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTS---EEEEEETTTT-EEEEEEECCC--
T ss_pred CccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCC---cEEEEECCCC-ceeEEEeccccc
Confidence 98 66655 553 2578899999999998 788888888 9999999874 67788888 8
Q ss_pred ---CCCeeEEEeCCCCCCeEEEEeCC---CcEEEEECCCCeEEEEecC-------------CCCCeEEeEEcCCCCCEEE
Q 046451 264 ---TKGVIAMSWCPNDSSYLLTCAKD---NRTICWDTVSGEIVSELPA-------------GTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 264 ---~~~V~~v~~sp~d~~~l~sgs~D---g~I~iwd~~~~~~~~~l~~-------------h~~~v~~l~~spdg~~~la 324 (719)
...|.+++|++ ++++|++++.| +.|++||+++++.+..+.. |...|.+++|++++ .+|+
T Consensus 230 ~~~~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~ 307 (397)
T 1sq9_A 230 INNSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG-ETLC 307 (397)
T ss_dssp -CCCCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSS-SEEE
T ss_pred cccCCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCC-CEEE
Confidence 99999999999 89999999999 9999999999999999998 99999999999999 7999
Q ss_pred EEeCCCcEEEEeCCCCccccc
Q 046451 325 ASSFDGKIGIYNIEGCSRYGV 345 (719)
Q Consensus 325 s~s~Dg~I~iwd~~~~~~~~~ 345 (719)
+++.||.|+|||+.+++.+..
T Consensus 308 ~~~~dg~i~iwd~~~~~~~~~ 328 (397)
T 1sq9_A 308 SAGWDGKLRFWDVKTKERITT 328 (397)
T ss_dssp EEETTSEEEEEETTTTEEEEE
T ss_pred EEeCCCeEEEEEcCCCceeEE
Confidence 999999999999999887653
No 84
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1e-30 Score=310.66 Aligned_cols=337 Identities=14% Similarity=0.190 Sum_probs=267.8
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
+...|.+++|+|||++||+|+.||.| +|||+..+..... ...|...|++++|++++ .
T Consensus 54 ~~~~v~~~~~s~~~~~l~~~~~dg~i----------~vw~~~~~~~~~~-----~~~~~~~v~~~~~s~~~--------~ 110 (814)
T 3mkq_A 54 TETPVRAGKFIARKNWIIVGSDDFRI----------RVFNYNTGEKVVD-----FEAHPDYIRSIAVHPTK--------P 110 (814)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEE----------EEEETTTCCEEEE-----EECCSSCEEEEEECSSS--------S
T ss_pred CCCcEEEEEEeCCCCEEEEEeCCCeE----------EEEECCCCcEEEE-----EecCCCCEEEEEEeCCC--------C
Confidence 56789999999999999999888876 8898876543322 24588999999999998 7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|++++.||.|++||+.. .. .....+.+|...|.+++|++.++++|++++.||.|++||+.+......+
T Consensus 111 ~l~~~~~dg~i~vw~~~~-----~~---~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~--- 179 (814)
T 3mkq_A 111 YVLSGSDDLTVKLWNWEN-----NW---ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL--- 179 (814)
T ss_dssp EEEEEETTSEEEEEEGGG-----TS---EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEE---
T ss_pred EEEEEcCCCEEEEEECCC-----Cc---eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEE---
Confidence 999999999999999842 12 5567788899999999999966789999999999999999877655442
Q ss_pred cCCCCCCCCCeEEEEecC--CCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC
Q 046451 166 RGNGSAAQGEISFVSWNS--KVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp--~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~ 243 (719)
. ..+...+.+++|++ ++ .+|++++.||.|++||+++++.+..+. .|...|.+++|++++. ++++++.|+
T Consensus 180 ~---~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~dg--- 250 (814)
T 3mkq_A 180 T---TGQERGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQTKSCVATLE-GHMSNVSFAVFHPTLP-IIISGSEDG--- 250 (814)
T ss_dssp E---CCCTTCCCEEEECCSTTC-CEEEEECTTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECSSSS-EEEEEETTS---
T ss_pred e---cCCCCCEEEEEEEECCCC-CEEEEEeCCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCC-EEEEEeCCC---
Confidence 2 22446899999998 75 699999999999999999999988888 7889999999999984 889999888
Q ss_pred cEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCC-eEEEEeCCCcEEEEECCCCe----------EEEE----------
Q 046451 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS-YLLTCAKDNRTICWDTVSGE----------IVSE---------- 302 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~-~l~sgs~Dg~I~iwd~~~~~----------~~~~---------- 302 (719)
.|++||+.+. ..+..+..|...+.+++|++ ++. ++++++.|+.+.+|++..+. .+..
T Consensus 251 ~v~vwd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 328 (814)
T 3mkq_A 251 TLKIWNSSTY-KVEKTLNVGLERSWCIATHP-TGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDI 328 (814)
T ss_dssp CEEEEETTTC-SEEEEECCSSSSEEEEEECT-TCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCE
T ss_pred eEEEEECCCC-cEEEEeecCCCcEEEEEEcc-CCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceee
Confidence 8999999875 67888889999999999999 554 44666667889999876432 2221
Q ss_pred -----------------------ecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcc
Q 046451 303 -----------------------LPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPK 359 (719)
Q Consensus 303 -----------------------l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~ 359 (719)
+..+...+.+++|+|+| .+|++++ |+.+.||++.......
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~la~~~-~~~~~i~~~~~~~~~~--------------- 391 (814)
T 3mkq_A 329 FTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNG-RFVTVVG-DGEYVIYTALAWRNKA--------------- 391 (814)
T ss_dssp EEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTS-SEEEEEE-TTEEEEEETTTTEEEE---------------
T ss_pred eeeecccccccccCccceeeeecCCCCccCCceeEECCCC-CEEEEec-CCEEEEEECccccccC---------------
Confidence 12234467899999999 7888888 9999999976543322
Q ss_pred eecCCCceeeeeCCcEEEEccCCCCC--ccccccccccceeeccCCCC
Q 046451 360 WYKRPAGASFGFGGKLVSFHPKSSAG--HTSENSQHAPVHGVDQSKYG 405 (719)
Q Consensus 360 w~~~~~~~s~s~~Gklv~~~~~~~~~--~~~~~~~~~~v~~v~~s~~~ 405 (719)
......++|++||++++....++.. .+.+.+|...|..+++|+|+
T Consensus 392 -~~~i~~~~~spdg~~la~~~~~g~v~l~~~~~~~~~~v~~~~~s~dg 438 (814)
T 3mkq_A 392 -FGKCQDFVWGPDSNSYALIDETGQIKYYKNFKEVTSWSVPMHSAIDR 438 (814)
T ss_dssp -EEECSEEEECTTSSCEEEECTTCCEEEEETTEECTTCCCCCSSCCCE
T ss_pred -CCceEEEEEeCCCCeEEEEeCCCcEEEEECCCCccceEEcCCcCccc
Confidence 1123457788888877666555432 23578899999999999997
No 85
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.8e-31 Score=279.81 Aligned_cols=286 Identities=13% Similarity=0.173 Sum_probs=226.9
Q ss_pred cccCccceEEEcCC---CCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCC
Q 046451 5 KGINRSASVAFAPD---APYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSED 81 (719)
Q Consensus 5 ~~~~~V~~vafSpd---g~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~ 81 (719)
.|.+.|++++|+|+ |++||+|+.||.| +|||+....... ......|...|++++|++++
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i----------~iw~~~~~~~~~---~~~~~~h~~~v~~~~~~~~~----- 98 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDV----------RCWEVQDSGQTI---PKAQQMHTGPVLDVCWSDDG----- 98 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEETTSEE----------EEEEECTTSCEE---EEEEEECSSCEEEEEECTTS-----
T ss_pred CCCCceEEEEEcCCCCCceEEEEECCCCcE----------EEEEcCCCCcee---EEEeccccCCEEEEEECcCC-----
Confidence 46689999999999 6999999988876 889988532211 12234589999999999998
Q ss_pred CccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEE--eCCCCCEEEEEeCCCcEEEEcCCCCCCC
Q 046451 82 FSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEF--NSFTPNLLASGADDGEICIWDLSAPAEP 159 (719)
Q Consensus 82 ~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~f--sp~~~~~lasgs~dg~I~iwdl~~~~~~ 159 (719)
.+|++++.||.|++||+. ++ . ...+..|...|.+++| ++ ++++|++++.||.|++||+.+.+..
T Consensus 99 ---~~l~s~~~dg~v~iwd~~------~~---~-~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~ 164 (368)
T 3mmy_A 99 ---SKVFTASCDKTAKMWDLS------SN---Q-AIQIAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPM 164 (368)
T ss_dssp ---SEEEEEETTSEEEEEETT------TT---E-EEEEEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCS
T ss_pred ---CEEEEEcCCCcEEEEEcC------CC---C-ceeeccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEE
Confidence 799999999999999984 33 3 3446679999999999 77 7789999999999999999988766
Q ss_pred CccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEE-ecCCCCCceeEEEECCCCC---cEEEE
Q 046451 160 SHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS-FSESIKRRCSVLQWNPDVA---TQLVV 235 (719)
Q Consensus 160 ~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~-~~~~~~~~i~~l~~sp~g~---~~l~~ 235 (719)
..+ .. ...+.++.+..+ .+++++.++.+++||++....... +.......+.++.+..+.. ..+++
T Consensus 165 ~~~---~~-----~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (368)
T 3mmy_A 165 MVL---QL-----PERCYCADVIYP---MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFAL 233 (368)
T ss_dssp EEE---EC-----SSCEEEEEEETT---EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEE
T ss_pred EEE---ec-----CCCceEEEecCC---eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEE
Confidence 553 21 236777777654 688889999999999987654333 2223445556666554432 23888
Q ss_pred EeCCCCCCcEEEEecCCCC--CceEEeeCCCC------------CeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEE
Q 046451 236 ASDEDSSPALRLWDMRNTM--SPVKEFVGHTK------------GVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301 (719)
Q Consensus 236 ~s~d~~~~~I~lwDl~~~~--~~~~~~~~h~~------------~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~ 301 (719)
++.++ .|++||++... ..+..+.+|.. .|.+++|++ ++++|++++.||.|+|||+.+++.+.
T Consensus 234 ~~~dg---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~ 309 (368)
T 3mmy_A 234 GSIEG---RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKDARTKLK 309 (368)
T ss_dssp EETTS---EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEE
T ss_pred ecCCC---cEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEec-CCCEEEEEccCCeEEEEECCCCcEEE
Confidence 88888 99999998753 34567777776 799999999 89999999999999999999999999
Q ss_pred EecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 302 ~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
.+..|...|.+++|++++ .+|++++.|+..+.|++.
T Consensus 310 ~~~~~~~~v~~~~~s~~g-~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 310 TSEQLDQPISACCFNHNG-NIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp ECCCCSSCEEEEEECTTS-SCEEEEECCCSTTCGGGC
T ss_pred EecCCCCCceEEEECCCC-CeEEEEeccccccccccc
Confidence 999999999999999999 788888888765555543
No 86
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-32 Score=301.38 Aligned_cols=305 Identities=12% Similarity=0.119 Sum_probs=234.4
Q ss_pred cCccceEEEcCCCCeEEEeecccee-----------------ecccCCCceEEEEEeeccCCcccceeecccCCCCCcee
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAV-----------------DLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNR 69 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v-----------------~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~ 69 (719)
..+|.+|+|||||++||+++.|++| .|.|+.++.+++|++...+....+ ...+...|.+
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~----~~~~~~~V~~ 90 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLL----NSQPVCYPRV 90 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSS----TTSCSCCEEE
T ss_pred hccEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEe----ecCCCCcEEE
Confidence 3789999999999999999999999 455555566666666654433222 2245788999
Q ss_pred eeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccC-----CEEEEEEeCCCCCEEEEEeC
Q 046451 70 LAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKG-----PVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 70 l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~-----~V~~l~fsp~~~~~lasgs~ 144 (719)
++|||+| .+||+++.||.|+|||.+ ..+..+. |.. .|.+++|+| ++++|++|+.
T Consensus 91 vawSPdG--------~~LAs~s~dg~V~iwd~~-----------~~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~ 149 (588)
T 2j04_A 91 CKPSPID--------DWMAVLSNNGNVSVFKDN-----------KMLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNE 149 (588)
T ss_dssp EEECSSS--------SCEEEEETTSCEEEEETT-----------EEEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEET
T ss_pred EEECCCC--------CEEEEEeCCCcEEEEeCC-----------ceeeecc-CCCccccccEEEEEEcC-CCCEEEEEcC
Confidence 9999999 799999999999999963 3455556 665 599999999 8999999999
Q ss_pred CCcEEEEcCCCCCCCC----ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce---eEEecCCCC
Q 046451 145 DGEICIWDLSAPAEPS----HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP---VISFSESIK 217 (719)
Q Consensus 145 dg~I~iwdl~~~~~~~----~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~---~~~~~~~~~ 217 (719)
||+|+|||+.++.... .+..++....+|...|.+++|+|+| +++++.|++|++||+.+++. ..++...|.
T Consensus 150 DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~ 226 (588)
T 2j04_A 150 DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASR 226 (588)
T ss_dssp TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCS
T ss_pred CCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeeccccc
Confidence 9999999999865311 1122444456688999999999996 78889999999999998774 345533678
Q ss_pred CceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEe--CCCCCCeEEEEeCCCcEEEEECC
Q 046451 218 RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSW--CPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 218 ~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~--sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
..|.+++|+ | ..+++++ ++ +|++||+.+. .......+|...|.++.| ++ ++..|+++++||+ ++|..+
T Consensus 227 ~~V~svaFs--g-~~LASa~-~~---tIkLWd~~~~-~~~~~~~gh~~~V~~va~~~s~-d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 227 RKITDLKIV--D-YKVVLTC-PG---YVHKIDLKNY-SISSLKTGSLENFHIIPLNHEK-ESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp SCCCCEEEE--T-TEEEEEC-SS---EEEEEETTTT-EEEEEECSCCSCCCEEEETTCS-SCEEEEECSSCEE-EEEESS
T ss_pred CcEEEEEEE--C-CEEEEEe-CC---eEEEEECCCC-eEEEEEcCCCceEEEEEeeeCC-CCCEEEEEcCCCC-EEEeec
Confidence 899999999 4 5777776 45 8999999764 322223389999999999 99 8899999999999 999986
Q ss_pred CCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcE
Q 046451 296 SGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKL 375 (719)
Q Consensus 296 ~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gkl 375 (719)
.++|++|+ .++++. |+++++|+..+..... .+.. ....+++|++||++
T Consensus 297 ----------------~~~~spd~-~l~a~~--d~~v~lW~~~g~~l~~-~~~~------------~~I~~va~SPdG~~ 344 (588)
T 2j04_A 297 ----------------ELHVTADN-IIAPYL--EKKFKKWSTIWNEFNN-YETT------------LVIHGISLSPDGYS 344 (588)
T ss_dssp ----------------SEEEECCC-SSHHHH--HHHHHHTTTTTTSSSS-SCCE------------EEEEEEEECTTSSE
T ss_pred ----------------cEEECCCc-eEEEEc--CCEEEEEECCCCceee-eccc------------eEEEEEEECCCCCE
Confidence 26699998 566664 9999999986655321 1111 11356899999998
Q ss_pred EEEccC
Q 046451 376 VSFHPK 381 (719)
Q Consensus 376 v~~~~~ 381 (719)
++...+
T Consensus 345 lA~~~~ 350 (588)
T 2j04_A 345 IAIVYD 350 (588)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 876643
No 87
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.98 E-value=9.3e-32 Score=289.46 Aligned_cols=248 Identities=11% Similarity=0.117 Sum_probs=197.9
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasg 142 (719)
+...|++++|++++ ++|++|+.||.|+|||+.. + ....+..+.+|.+.|.+++|++ ++++|+++
T Consensus 10 ~~~~v~~~~~s~~g--------~~l~~~~~d~~i~iw~~~~------~-~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~ 73 (377)
T 3dwl_C 10 LPKPSYEHAFNSQR--------TEFVTTTATNQVELYEQDG------N-GWKHARTFSDHDKIVTCVDWAP-KSNRIVTC 73 (377)
T ss_dssp CSSCCSCCEECSSS--------SEEECCCSSSCBCEEEEET------T-EEEECCCBCCCSSCEEEEEECT-TTCCEEEE
T ss_pred CCCcEEEEEECCCC--------CEEEEecCCCEEEEEEccC------C-ceEEEEEEecCCceEEEEEEeC-CCCEEEEE
Confidence 56789999999998 7999999999999999843 1 0135567788999999999999 78999999
Q ss_pred eCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc---eeEEecCCCCCc
Q 046451 143 ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK---PVISFSESIKRR 219 (719)
Q Consensus 143 s~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~---~~~~~~~~~~~~ 219 (719)
+.|+.|+|||+.+.+..... .....|...|.+++|++++ .+|++++.|+.|++||+++++ ....+...|...
T Consensus 74 s~d~~v~vwd~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~ 148 (377)
T 3dwl_C 74 SQDRNAYVYEKRPDGTWKQT----LVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRST 148 (377)
T ss_dssp ETTSSEEEC------CCCCE----EECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----CCCCEEECSSCCSC
T ss_pred eCCCeEEEEEcCCCCceeee----eEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcccceeeeEeecccCCC
Confidence 99999999999987622111 1223578899999999997 589999999999999999887 366676338999
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCC-----------------CCceEEeeCCCCCeeEEEeCCCCCCeEEE
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNT-----------------MSPVKEFVGHTKGVIAMSWCPNDSSYLLT 282 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~-----------------~~~~~~~~~h~~~V~~v~~sp~d~~~l~s 282 (719)
|.+++|++++ .+|++++.|+ .|++||++.. ...+..+ +|...|.+++|+| ++++|++
T Consensus 149 v~~~~~~~~~-~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~~ 222 (377)
T 3dwl_C 149 ILSLDWHPNN-VLLAAGCADR---KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSP-SGNALAY 222 (377)
T ss_dssp EEEEEECTTS-SEEEEEESSS---CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECT-TSSCEEE
T ss_pred eEEEEEcCCC-CEEEEEeCCC---EEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECC-CCCEEEE
Confidence 9999999998 5899999998 8999998532 1234455 8999999999999 8999999
Q ss_pred EeCCCcEEEEECCCCeE----EEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 283 CAKDNRTICWDTVSGEI----VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 283 gs~Dg~I~iwd~~~~~~----~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
++.||.|+|||+.+++. +..+..|...|.+++|++++ .+|++++.|+.+ +|+...
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~~~-~~~~~~ 281 (377)
T 3dwl_C 223 AGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANES-AIVAAGYNYSPI-LLQGNE 281 (377)
T ss_dssp EETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETT-EEEEEESSSSEE-EECCCC
T ss_pred EeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCC-CEEEEEcCCcEE-EEEeCC
Confidence 99999999999999887 78888999999999999999 788888866555 676653
No 88
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.2e-30 Score=274.27 Aligned_cols=288 Identities=15% Similarity=0.235 Sum_probs=232.2
Q ss_pred ecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCC
Q 046451 58 VGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN 137 (719)
Q Consensus 58 ~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~ 137 (719)
....+|...|++++|++++ .+|++++.||.|++||+ .++ +.+..+..|.+.|.+++|++ +++
T Consensus 26 ~~l~~h~~~v~~~~~s~~~--------~~l~~~~~dg~i~vwd~------~~~---~~~~~~~~h~~~v~~~~~~~-~~~ 87 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEG--------DLLFSCSKDSSASVWYS------LNG---ERLGTLDGHTGTIWSIDVDC-FTK 87 (369)
T ss_dssp EEEECCSSCEEEEEECTTS--------CEEEEEESSSCEEEEET------TTC---CEEEEECCCSSCEEEEEECT-TSS
T ss_pred EEEEEeeceEEEEEEcCCC--------CEEEEEeCCCEEEEEeC------CCc---hhhhhhhhcCCcEEEEEEcC-CCC
Confidence 3345799999999999998 79999999999999998 555 78888999999999999999 889
Q ss_pred EEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC-----CcEEEEECCCCce----
Q 046451 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN-----GTTVVWDLKKQKP---- 208 (719)
Q Consensus 138 ~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d-----g~I~iwd~~~~~~---- 208 (719)
+|++++.||.|++||+.+++....+ . +...|.+++|++++ .+|++++.+ |.|++||++....
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~---~-----~~~~v~~~~~~~~~-~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~ 158 (369)
T 3zwl_B 88 YCVTGSADYSIKLWDVSNGQCVATW---K-----SPVPVKRVEFSPCG-NYFLAILDNVMKNPGSINIYEIERDSATHEL 158 (369)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEE---E-----CSSCEEEEEECTTS-SEEEEEECCBTTBCCEEEEEEEEECTTTCCE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEe---e-----cCCCeEEEEEccCC-CEEEEecCCccCCCCEEEEEEecCCccceee
Confidence 9999999999999999988765543 1 55689999999997 588889888 9999999987642
Q ss_pred -------eEEecCCCCC--ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCe
Q 046451 209 -------VISFSESIKR--RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSY 279 (719)
Q Consensus 209 -------~~~~~~~~~~--~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~ 279 (719)
+..+. .+.. .+.+++|++++ .+|++++.++ .|++||+++....+..+..|...|.+++|++ ++.+
T Consensus 159 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 232 (369)
T 3zwl_B 159 TKVSEEPIHKII-THEGLDAATVAGWSTKG-KYIIAGHKDG---KISKYDVSNNYEYVDSIDLHEKSISDMQFSP-DLTY 232 (369)
T ss_dssp EEECSSCSEEEE-CCTTCCCEEEEEECGGG-CEEEEEETTS---EEEEEETTTTTEEEEEEECCSSCEEEEEECT-TSSE
T ss_pred cccccceeeecc-CCcCccceeEEEEcCCC-CEEEEEcCCC---EEEEEECCCCcEeEEEEecCCCceeEEEECC-CCCE
Confidence 22222 3444 89999999998 4788888887 9999999886677888999999999999999 9999
Q ss_pred EEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCC--------------cEEEEeCCCCccccc
Q 046451 280 LLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDG--------------KIGIYNIEGCSRYGV 345 (719)
Q Consensus 280 l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg--------------~I~iwd~~~~~~~~~ 345 (719)
|++++.|+.|++||+++++.+..+. +...+..++|++++ .++++++.++ .|++||+.+++....
T Consensus 233 l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 310 (369)
T 3zwl_B 233 FITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLK-EFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGR 310 (369)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSS-SEEEEEECCC-------------CEEEEEETTTCCEEEE
T ss_pred EEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCC-ceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhh
Confidence 9999999999999999999998887 66779999999999 7888888887 899999998877653
Q ss_pred CCCCCCCCCccCcceecCC-CceeeeeCCcEEEEccCC
Q 046451 346 GDSNFSAAPLRAPKWYKRP-AGASFGFGGKLVSFHPKS 382 (719)
Q Consensus 346 ~~~~~~~~~~~~p~w~~~~-~~~s~s~~Gklv~~~~~~ 382 (719)
.... ...+....|.... ..++.+.||.+..|..+.
T Consensus 311 ~~~~--~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 311 VQGH--FGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp EECC--SSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred eecc--cCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 2211 1122333444332 233444455555555443
No 89
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.98 E-value=9.2e-31 Score=288.13 Aligned_cols=306 Identities=14% Similarity=0.229 Sum_probs=226.7
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccC--CCCCCCCceeeecccc------------CCE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISS--GETGGNPLIAHLSRHK------------GPV 126 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~--~~~~~~~~~~~l~~h~------------~~V 126 (719)
..+.+.|++++|++++ .+|++|+.||.|+|||+...... ...........+.+|. +.|
T Consensus 25 ~~~~~~V~~v~~s~~g--------~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V 96 (447)
T 3dw8_B 25 VAEADIISTVEFNHSG--------ELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKI 96 (447)
T ss_dssp CCGGGSEEEEEECSSS--------SEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCC
T ss_pred ccccCcEEEEEECCCC--------CEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCce
Confidence 4567899999999998 79999999999999998542210 0011112567888998 889
Q ss_pred EEEEEeCCCC--CEEEEEeCCCcEEEEcCCCCCCCCccC----------------Cc-----------------cCCCCC
Q 046451 127 RGLEFNSFTP--NLLASGADDGEICIWDLSAPAEPSHFP----------------PL-----------------RGNGSA 171 (719)
Q Consensus 127 ~~l~fsp~~~--~~lasgs~dg~I~iwdl~~~~~~~~~~----------------~l-----------------~~~~~~ 171 (719)
.+++|++ ++ .+|++++.|+.|++||+.+........ .+ +....+
T Consensus 97 ~~l~~~~-~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (447)
T 3dw8_B 97 NKIRWLP-QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANA 175 (447)
T ss_dssp CEEEECC-CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSC
T ss_pred EEEEEcC-CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccC
Confidence 9999999 55 799999999999999987633210000 00 011246
Q ss_pred CCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC-CceeEEe------cCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK-QKPVISF------SESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 172 h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~-~~~~~~~------~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
|...|.+++|++++ .+|+++ .|+.|++||+++ ++.+..+ ...|...|.+++|++++..+|++++.|+ .
T Consensus 176 h~~~v~~~~~~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg---~ 250 (447)
T 3dw8_B 176 HTYHINSISINSDY-ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG---T 250 (447)
T ss_dssp CSSCCCEEEECTTS-SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS---C
T ss_pred CCcceEEEEEcCCC-CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC---e
Confidence 88899999999997 588888 799999999994 4444422 2268899999999999867899999998 9
Q ss_pred EEEEecCCCCC---ceEEeeCCCC------------CeeEEEeCCCCCCeEEEEeCCCcEEEEECCC-CeEEEEecCCCC
Q 046451 245 LRLWDMRNTMS---PVKEFVGHTK------------GVIAMSWCPNDSSYLLTCAKDNRTICWDTVS-GEIVSELPAGTN 308 (719)
Q Consensus 245 I~lwDl~~~~~---~~~~~~~h~~------------~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~-~~~~~~l~~h~~ 308 (719)
|++||+++... .+..+.+|.. .|.+++|++ ++++|++++. +.|+|||+++ ++.+..+.+|..
T Consensus 251 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~ 328 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEY 328 (447)
T ss_dssp EEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCEESCGG
T ss_pred EEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCccccceeecccc
Confidence 99999987642 1677888876 899999999 9999999999 9999999997 888888888864
Q ss_pred C---------------eEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCC--CCCCc----------------
Q 046451 309 W---------------NFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNF--SAAPL---------------- 355 (719)
Q Consensus 309 ~---------------v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~--~~~~~---------------- 355 (719)
. ++.++|++++ .+|++++.||.|+|||+.+++.+....+.- .....
T Consensus 329 ~~~~l~~~~~~~~i~~~~~~~~s~~~-~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (447)
T 3dw8_B 329 LRSKLCSLYENDCIFDKFECCWNGSD-SVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDE 407 (447)
T ss_dssp GTTTHHHHHHTSGGGCCCCEEECTTS-SEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTC
T ss_pred ccccccccccccccccceEEEECCCC-CEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCccccc
Confidence 2 3349999999 789999999999999999987654211110 00000
Q ss_pred ---cCcceecCCCceeeeeCCcEEEEccCCC
Q 046451 356 ---RAPKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 356 ---~~p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
....+......++|+++|.++++...+.
T Consensus 408 ~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~ 438 (447)
T 3dw8_B 408 ISVDSLDFNKKILHTAWHPKENIIAVATTNN 438 (447)
T ss_dssp EEGGGCCTTSCCCEEEECSSSSEEEEECSSC
T ss_pred ccccccccCCceeEEEECCCCCEEEEEecce
Confidence 0111222345688888888888776554
No 90
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=9.5e-31 Score=280.58 Aligned_cols=255 Identities=15% Similarity=0.247 Sum_probs=205.3
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCC--CCCCCCC
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKN--GSGSEDF 82 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~--g~~~~~~ 82 (719)
.|.+.|.+++|++|+++||+|+.||.| +|||+....... ......|...|++++|+++ +
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~dg~i----------~iw~~~~~~~~~---~~~~~~h~~~v~~~~~~~~~~~------ 69 (379)
T 3jrp_A 9 AHNELIHDAVLDYYGKRLATCSSDKTI----------KIFEVEGETHKL---IDTLTGHEGPVWRVDWAHPKFG------ 69 (379)
T ss_dssp ECCCCEEEEEECSSSSEEEEEETTSCE----------EEEEEETTEEEE---EEEECCCSSCEEEEEECCGGGC------
T ss_pred CCcccEEEEEEcCCCCEEEEEECCCcE----------EEEecCCCccee---eeEecCCCCcEEEEEeCCCCCC------
Confidence 467899999999999999999988876 889987322111 1223568999999999976 5
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC--CCEEEEEeCCCcEEEEcCCCCCCCC
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT--PNLLASGADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~--~~~lasgs~dg~I~iwdl~~~~~~~ 160 (719)
.+|++++.||.|++||+.. + ....+..+..|...|.+++|++ + +++|++++.|+.|++||+.+.....
T Consensus 70 --~~l~s~~~dg~v~iwd~~~------~-~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 139 (379)
T 3jrp_A 70 --TILASCSYDGKVLIWKEEN------G-RWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTS 139 (379)
T ss_dssp --SEEEEEETTSCEEEEEEET------T-EEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTSCCC
T ss_pred --CEEEEeccCCEEEEEEcCC------C-ceeEeeeecCCCcceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCCcee
Confidence 7999999999999999843 2 0026777888999999999999 6 8999999999999999999875443
Q ss_pred ccCCccCCCCCCCCCeEEEEecCC------------CCcEEEEEeCCCcEEEEECCCCc----eeEEecCCCCCceeEEE
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSK------------VQHILASTSYNGTTVVWDLKKQK----PVISFSESIKRRCSVLQ 224 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~------------g~~~l~s~s~dg~I~iwd~~~~~----~~~~~~~~~~~~i~~l~ 224 (719)
.+ ....|...|.+++|++. +..+|++++.||.|++||+++++ .+..+. .|...|.+++
T Consensus 140 ~~-----~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~h~~~v~~~~ 213 (379)
T 3jrp_A 140 PI-----IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVA 213 (379)
T ss_dssp EE-----EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEE
T ss_pred eE-----EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe-cccCcEeEEE
Confidence 32 12347789999999994 23699999999999999998765 334455 7899999999
Q ss_pred ECCCC--CcEEEEEeCCCCCCcEEEEecCCCCCce--E--EeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 225 WNPDV--ATQLVVASDEDSSPALRLWDMRNTMSPV--K--EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 225 ~sp~g--~~~l~~~s~d~~~~~I~lwDl~~~~~~~--~--~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
|++++ ..+|++++.|+ .|++||+++..... . ....|...|.+++|++ ++++|++++.||.|+|||+..+.
T Consensus 214 ~sp~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 214 WSPTVLLRSYLASVSQDR---TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp ECCCCSSSEEEEEEETTS---CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECS-SSCCEEEEESSSSEEEEEEEETT
T ss_pred ECCCCCCCCeEEEEeCCC---EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcC-CCCEEEEecCCCcEEEEeCCCCC
Confidence 99994 46899999998 89999998753221 2 2234888999999999 99999999999999999997543
No 91
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.1e-30 Score=284.31 Aligned_cols=299 Identities=16% Similarity=0.179 Sum_probs=226.3
Q ss_pred cceEEEcCCCCeEE-EeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecC-CCCCCCCCccceE
Q 046451 10 SASVAFAPDAPYMA-AGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGK-NGSGSEDFSLGLV 87 (719)
Q Consensus 10 V~~vafSpdg~~La-tgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp-~g~~~~~~~~~~l 87 (719)
...++++++...++ +++.+|.| +||+++....... .+....+|...|++++|++ ++ .+|
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i----------~v~~~~~~~~~~~-~~~~~~~h~~~V~~~~~~p~~~--------~~l 97 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAF----------LVLPLGKTGRVDK-NVPLVCGHTAPVLDIAWCPHND--------NVI 97 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCE----------EEEETTCCEECCT-TCCCBCCCSSCEEEEEECTTCT--------TEE
T ss_pred CCcEEECCCeEEEEEEEcCCCEE----------EEEECccCCCCCC-CCceEecCCCCEEEEEeCCCCC--------CEE
Confidence 44577887765443 45555555 8999864322111 1122356899999999999 66 799
Q ss_pred EEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccC
Q 046451 88 AGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRG 167 (719)
Q Consensus 88 asgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~ 167 (719)
++|+.||.|+|||+...... ......+..+.+|...|.+++|++++.++|++++.||.|+|||+.+++....+ .
T Consensus 98 ~s~s~dg~v~vw~~~~~~~~--~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~- 171 (402)
T 2aq5_A 98 ASGSEDCTVMVWEIPDGGLV--LPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTL---G- 171 (402)
T ss_dssp EEEETTSEEEEEECCTTCCS--SCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEE---C-
T ss_pred EEEeCCCeEEEEEccCCCCc--cccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEE---e-
Confidence 99999999999999532110 00014567888999999999999944479999999999999999987654332 1
Q ss_pred CCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc-eeEEEECCCCCcEEEEE---eCCCCCC
Q 046451 168 NGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR-CSVLQWNPDVATQLVVA---SDEDSSP 243 (719)
Q Consensus 168 ~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~-i~~l~~sp~g~~~l~~~---s~d~~~~ 243 (719)
...|...|.+++|++++ .+|++++.||.|++||+++++.+..+...|... +.++.|++++ .+|+++ +.++
T Consensus 172 -~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~~~~d~--- 245 (402)
T 2aq5_A 172 -PDVHPDTIYSVDWSRDG-ALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEG-KILTTGFSRMSER--- 245 (402)
T ss_dssp -TTTCCSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTT-EEEEEEECTTCCE---
T ss_pred -cCCCCCceEEEEECCCC-CEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCC-cEEEEeccCCCCc---
Confidence 13477899999999987 589999999999999999999988883255554 8999999997 577777 4555
Q ss_pred cEEEEecCCCCCceEEee-CCCCCeeEEEeCCCCCCeEEE-EeCCCcEEEEECCCCeE-EEEecC--CCCCeEEeEEcCC
Q 046451 244 ALRLWDMRNTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLT-CAKDNRTICWDTVSGEI-VSELPA--GTNWNFDIHWYPK 318 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~-~h~~~V~~v~~sp~d~~~l~s-gs~Dg~I~iwd~~~~~~-~~~l~~--h~~~v~~l~~spd 318 (719)
.|++||+++...++.... .|...|.+++|++ ++++|++ ++.||.|++||+.+++. +..+.. |...|.+++|+++
T Consensus 246 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~ 324 (402)
T 2aq5_A 246 QVALWDTKHLEEPLSLQELDTSSGVLLPFFDP-DTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPK 324 (402)
T ss_dssp EEEEEETTBCSSCSEEEECCCCSSCEEEEEET-TTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCG
T ss_pred eEEEEcCccccCCceEEeccCCCceeEEEEcC-CCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecc
Confidence 999999988655454443 5778899999999 8888764 55799999999998873 444433 5588999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 319 IPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 319 g~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
+ .++++ .|+.+++|++.+++..
T Consensus 325 ~-~~~~s--~~~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 325 R-GLEVN--KCEIARFYKLHERKCE 346 (402)
T ss_dssp G-GSCGG--GTEEEEEEEEETTEEE
T ss_pred c-cccee--cceeEEEEEcCCCcEE
Confidence 8 55553 5779999999987653
No 92
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.9e-30 Score=265.24 Aligned_cols=283 Identities=17% Similarity=0.213 Sum_probs=230.5
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
.+|...|++++| +++ ++|++++.||.|++||+ .++ .....+..|...|.+++|++ ++++|+
T Consensus 15 ~~h~~~v~~~~~-~~~--------~~l~s~~~dg~v~vw~~------~~~---~~~~~~~~~~~~v~~~~~~~-~~~~l~ 75 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDD--------SKVASVSRDGTVRLWSK------DDQ---WLGTVVYTGQGFLNSVCYDS-EKELLL 75 (313)
T ss_dssp CCCSSCEEEEEE-EET--------TEEEEEETTSEEEEEEE------SSS---EEEEEEEECSSCEEEEEEET-TTTEEE
T ss_pred hCCCCCcEEEEe-cCC--------CEEEEEEcCCcEEEEEC------CCC---EEEEEeecCCccEEEEEECC-CCCEEE
Confidence 568999999999 776 69999999999999998 444 67778888999999999999 889999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCce
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
+++.||.|++||+........+.. ...|...|.+++|+ + .+|++++.||.|++|| .++.+..+. .+...+
T Consensus 76 ~~~~dg~i~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~--~-~~l~~~~~d~~i~~~d--~~~~~~~~~-~~~~~v 145 (313)
T 3odt_A 76 FGGKDTMINGVPLFATSGEDPLYT----LIGHQGNVCSLSFQ--D-GVVISGSWDKTAKVWK--EGSLVYNLQ-AHNASV 145 (313)
T ss_dssp EEETTSCEEEEETTCCTTSCC-CE----ECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEE--TTEEEEEEE-CCSSCE
T ss_pred EecCCCeEEEEEeeecCCCCcccc----hhhcccCEEEEEec--C-CEEEEEeCCCCEEEEc--CCcEEEecc-cCCCce
Confidence 999999999999987654333221 24578899999993 3 5899999999999999 566777777 789999
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC-CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG-HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI 299 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~-h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~ 299 (719)
.+++|++....++++++.++ .|++||.. ..+..+.. |...|.+++|++ ++. |++++.||.|++||+++++.
T Consensus 146 ~~~~~~~~~~~~l~~~~~d~---~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~-~~~-~~~~~~dg~i~i~d~~~~~~ 217 (313)
T 3odt_A 146 WDAKVVSFSENKFLTASADK---TIKLWQND---KVIKTFSGIHNDVVRHLAVVD-DGH-FISCSNDGLIKLVDMHTGDV 217 (313)
T ss_dssp EEEEEEETTTTEEEEEETTS---CEEEEETT---EEEEEECSSCSSCEEEEEEEE-TTE-EEEEETTSEEEEEETTTCCE
T ss_pred eEEEEccCCCCEEEEEECCC---CEEEEecC---ceEEEEeccCcccEEEEEEcC-CCe-EEEccCCCeEEEEECCchhh
Confidence 99999983346899999988 89999943 45667776 899999999999 666 99999999999999999999
Q ss_pred EEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEc
Q 046451 300 VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFH 379 (719)
Q Consensus 300 ~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~ 379 (719)
+..+..|...|++++|++++ .|++++.||.|++||+.+++........ ...+....|......++.+.||++..|.
T Consensus 218 ~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~v~iwd~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 218 LRTYEGHESFVYCIKLLPNG--DIVSCGEDRTVRIWSKENGSLKQVITLP--AISIWSVDCMSNGDIIVGSSDNLVRIFS 293 (313)
T ss_dssp EEEEECCSSCEEEEEECTTS--CEEEEETTSEEEEECTTTCCEEEEEECS--SSCEEEEEECTTSCEEEEETTSCEEEEE
T ss_pred hhhhhcCCceEEEEEEecCC--CEEEEecCCEEEEEECCCCceeEEEecc--CceEEEEEEccCCCEEEEeCCCcEEEEe
Confidence 99999999999999999998 4888999999999999998876533222 1123444555555556666677777776
Q ss_pred cCCCC
Q 046451 380 PKSSA 384 (719)
Q Consensus 380 ~~~~~ 384 (719)
.+...
T Consensus 294 ~~~~~ 298 (313)
T 3odt_A 294 QEKSR 298 (313)
T ss_dssp SCGGG
T ss_pred CCCCc
Confidence 65544
No 93
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.2e-31 Score=290.60 Aligned_cols=315 Identities=11% Similarity=0.138 Sum_probs=223.9
Q ss_pred cCCCCCceeeeecC-CCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 61 SPSSERFNRLAWGK-NGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 61 ~~~~~~V~~l~~sp-~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
.+|...|++++|++ ++ .+|++|+.||.|+|||+..... +........+ .|.+.|.+++|++ ++++|
T Consensus 60 ~~h~~~V~~~~~s~~~~--------~~l~s~s~dg~v~vwd~~~~~~---~~~~~~~~~~-~h~~~v~~~~~~~-~~~~l 126 (437)
T 3gre_A 60 ENEPNSITSSAVSPGET--------PYLITGSDQGVIKIWNLKEIIV---GEVYSSSLTY-DCSSTVTQITMIP-NFDAF 126 (437)
T ss_dssp TTTTSCEEEEEEECSSS--------CEEEEEETTSEEEEEEHHHHHT---TCCCSCSEEE-ECSSCEEEEEECT-TSSEE
T ss_pred cCCCCceEEEEECCCCC--------CEEEEecCCceEEEeECccccc---Ccccceeeec-cCCCCEEEEEEeC-CCCEE
Confidence 45889999999999 87 7999999999999999854211 1001223333 5999999999999 88999
Q ss_pred EEEeCCCcEEEEcCC---CCCCCCccC-----CccCCCCCCCCCeEEEE--ecCCCCcEEEEEeCCCcEEEEECCCCcee
Q 046451 140 ASGADDGEICIWDLS---APAEPSHFP-----PLRGNGSAAQGEISFVS--WNSKVQHILASTSYNGTTVVWDLKKQKPV 209 (719)
Q Consensus 140 asgs~dg~I~iwdl~---~~~~~~~~~-----~l~~~~~~h~~~I~~l~--~sp~g~~~l~s~s~dg~I~iwd~~~~~~~ 209 (719)
++++.||.|++||+. +++....+. .+......+...+.++. +++++ .+|++++.||.|++||+++++.+
T Consensus 127 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~ 205 (437)
T 3gre_A 127 AVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK-SLLVALTNLSRVIIFDIRTLERL 205 (437)
T ss_dssp EEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC-EEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCeee
Confidence 999999999999995 333221110 01100011445677777 55665 69999999999999999999999
Q ss_pred EEecCC-CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEee-CCCCCeeEEEeCCC---CCCeEEEEe
Q 046451 210 ISFSES-IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFV-GHTKGVIAMSWCPN---DSSYLLTCA 284 (719)
Q Consensus 210 ~~~~~~-~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~-~h~~~V~~v~~sp~---d~~~l~sgs 284 (719)
..+... |...|.+++|++++ .+|++++.|+ .|++||+++. +.+..+. .|...|.+++|++. ++.+|++++
T Consensus 206 ~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg---~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~ 280 (437)
T 3gre_A 206 QIIENSPRHGAVSSICIDEEC-CVLILGTTRG---IIDIWDIRFN-VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGS 280 (437)
T ss_dssp EEEECCGGGCCEEEEEECTTS-CEEEEEETTS---CEEEEETTTT-EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEES
T ss_pred EEEccCCCCCceEEEEECCCC-CEEEEEcCCC---eEEEEEcCCc-cEEEEEecCCCCceEEEEeccccCCCccEEEEEc
Confidence 998832 78999999999997 5899999998 8999999874 6667665 78889999966541 677999999
Q ss_pred CCCcEEEEECCCCeEEEEecCC--------------------------CCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 285 KDNRTICWDTVSGEIVSELPAG--------------------------TNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 285 ~Dg~I~iwd~~~~~~~~~l~~h--------------------------~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
.||.|+|||+++++.+..+.+| ...|++++|+ ++ .+|++++.|+.|++||+.
T Consensus 281 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~~~d~~i~~wd~~ 358 (437)
T 3gre_A 281 SKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND-KILLTDEATSSIVMFSLN 358 (437)
T ss_dssp TTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-EEEEEEGGGTEEEEEETT
T ss_pred CCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc-eEEEecCCCCeEEEEECC
Confidence 9999999999999988887654 4457888898 66 799999999999999999
Q ss_pred CCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEc--cCCCCCccccccccccceeeccCCC
Q 046451 339 GCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFH--PKSSAGHTSENSQHAPVHGVDQSKY 404 (719)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~--~~~~~~~~~~~~~~~~v~~v~~s~~ 404 (719)
+++........-.. ........++.++.++... ............|...|.+|+++++
T Consensus 359 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~ 418 (437)
T 3gre_A 359 ELSSSKAVISPSRF--------SDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEV 418 (437)
T ss_dssp CGGGCEEEECC--C--------CCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEES
T ss_pred CcccceEEeccccc--------CceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeecc
Confidence 98875522211000 0000112334444443333 2222233445678888999888776
No 94
>2yru_A Steroid receptor RNA activator 1; SRAP, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.97 E-value=9.8e-33 Score=236.72 Aligned_cols=105 Identities=21% Similarity=0.331 Sum_probs=99.6
Q ss_pred CchhhHHHHHHHHHHHHHHhCCCCCCccchhhhhhHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHhcCChhHHHhhee
Q 046451 610 HQKPVINTLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDFGTALQIQV 689 (719)
Q Consensus 610 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~k~~~~d~~krl~~l~~~l~~~~ls~~~~~~l~~l~~~~~~~~~~~a~~i~~ 689 (719)
+.+++++.|++.|+++.+.|. .+.+||++||++|||++||||||+|+||++|+++|++||+||+++||++|++||+
T Consensus 10 ~~~~~i~~l~~~l~~~l~~~~----~~~~k~~~~D~~KRL~~LfdkLn~~~Ls~~v~~~L~~l~~al~~~dy~~A~~ih~ 85 (118)
T 2yru_A 10 ESETLIEDVLRPLEQALEDCH----GHTKKQVCDDISRRLALLREQWAGGKLSIPVKKRMALLVQELLHHQWDAADDIHR 85 (118)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 788999999999999988874 3567888999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcccchhHHHHHHHHHhccccccC
Q 046451 690 LLTTSDWDECNFWLATLKRMIKTRQNVRL 718 (719)
Q Consensus 690 ~l~~~~~~e~~~w~~g~k~li~~~~~~~~ 718 (719)
.|+++||+||++||+||||||++++++++
T Consensus 86 ~l~t~~~~E~~~Wm~GlKrLI~~a~~~~~ 114 (118)
T 2yru_A 86 SLMVDHVTEVSQWMVGVKRLIAEKKSLSG 114 (118)
T ss_dssp HHHHSTHHHHTTTHHHHHHHHHHHHHHHS
T ss_pred HHHHCcHHHHHhHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999876
No 95
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=2e-29 Score=279.47 Aligned_cols=298 Identities=16% Similarity=0.228 Sum_probs=241.8
Q ss_pred cCCCCC-ceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 61 SPSSER-FNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 61 ~~~~~~-V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
.+|... +.++.|+ + ++|++|+.||.|++||+ .++ +.+..+.+|.+.|.+++|++ ++ +|
T Consensus 118 ~~h~~~v~~~~~~~--~--------~~l~sgs~dg~i~vwd~------~~~---~~~~~~~~h~~~V~~l~~~~-~~-~l 176 (464)
T 3v7d_B 118 RGHMTSVITCLQFE--D--------NYVITGADDKMIRVYDS------INK---KFLLQLSGHDGGVWALKYAH-GG-IL 176 (464)
T ss_dssp ECCSSSCEEEEEEE--T--------TEEEEEETTSCEEEEET------TTT---EEEEEECCCSSCEEEEEECS-TT-EE
T ss_pred cCCCCCcEEEEEEC--C--------CEEEEEcCCCcEEEEEC------CCC---cEEEEEeCCCcCEEEEEEcC-CC-EE
Confidence 356666 4677774 3 59999999999999999 556 78888999999999999988 44 99
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecC--CCCcEEEEEeCCCcEEEEECCCCcee--------
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNS--KVQHILASTSYNGTTVVWDLKKQKPV-------- 209 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp--~g~~~l~s~s~dg~I~iwd~~~~~~~-------- 209 (719)
++|+.||+|++||+.+++....+ ..|.+.|.+++|++ ++ .+|++++.||+|++||+++++..
T Consensus 177 ~s~s~dg~i~vwd~~~~~~~~~~-------~~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~ 248 (464)
T 3v7d_B 177 VSGSTDRTVRVWDIKKGCCTHVF-------EGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHD 248 (464)
T ss_dssp EEEETTSCEEEEETTTTEEEEEE-------CCCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CC
T ss_pred EEEeCCCCEEEEECCCCcEEEEE-------CCCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCC
Confidence 99999999999999987755442 35788999999984 43 69999999999999999987532
Q ss_pred ---------------EEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCC
Q 046451 210 ---------------ISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCP 274 (719)
Q Consensus 210 ---------------~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp 274 (719)
..+. .|...+.++. +++ .++++++.|+ .|++||+++. +.+..+.+|...|.+++|++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~--~~~-~~l~~~~~d~---~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~ 320 (464)
T 3v7d_B 249 YPLVFHTPEENPYFVGVLR-GHMASVRTVS--GHG-NIVVSGSYDN---TLIVWDVAQM-KCLYILSGHTDRIYSTIYDH 320 (464)
T ss_dssp SSEEESCGGGCTTEEEEEC-CCSSCEEEEE--EET-TEEEEEETTS---CEEEEETTTT-EEEEEECCCSSCEEEEEEET
T ss_pred cceEeeccCCCeEEEEEcc-CccceEEEEc--CCC-CEEEEEeCCC---eEEEEECCCC-cEEEEecCCCCCEEEEEEcC
Confidence 2333 6777777774 444 4799999998 8999999874 67888899999999999999
Q ss_pred CCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCC
Q 046451 275 NDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAP 354 (719)
Q Consensus 275 ~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~ 354 (719)
++++|++|+.||.|++||+++++.+..+.+|...|.++.|+ + .+|++++.||.|++||+.+.+......+...
T Consensus 321 -~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~--- 393 (464)
T 3v7d_B 321 -ERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--D-KFLVSAAADGSIRGWDANDYSRKFSYHHTNL--- 393 (464)
T ss_dssp -TTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--S-SEEEEEETTSEEEEEETTTCCEEEEEECTTC---
T ss_pred -CCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--C-CEEEEEeCCCcEEEEECCCCceeeeecCCCC---
Confidence 99999999999999999999999999999999999999998 3 6899999999999999998776543322211
Q ss_pred ccCcceecCCCceeeeeCCcEEEEccCCCCCccc-cccccccceeeccC
Q 046451 355 LRAPKWYKRPAGASFGFGGKLVSFHPKSSAGHTS-ENSQHAPVHGVDQS 402 (719)
Q Consensus 355 ~~~p~w~~~~~~~s~s~~Gklv~~~~~~~~~~~~-~~~~~~~v~~v~~s 402 (719)
.....|......+..+.||.+..|+..++...+. +.+|.+.|.+|+++
T Consensus 394 ~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~ 442 (464)
T 3v7d_B 394 SAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFK 442 (464)
T ss_dssp CCEEEEEECSSEEEEEETTEEEEEETTTCCEEESCTTTTCSEEEEEEEE
T ss_pred ccEEEEEeCCCEEEEecCCeEEEEECCCCcEEehhhccCCCcEEEEEec
Confidence 1233455555555566688888888877776654 67888889998885
No 96
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.2e-29 Score=277.14 Aligned_cols=247 Identities=8% Similarity=-0.012 Sum_probs=199.4
Q ss_pred CCCCceeeeecCCCCCCCCCccce-EEEEcCCCcEEEEcCCccccCCCCCCCCceeeec--cccCCEEEEEEeCCCCCEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGL-VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS--RHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~-lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~--~h~~~V~~l~fsp~~~~~l 139 (719)
|...|++++|++++ .+ +++|+.||.|+|||+.. .++ ..+..+. .|...|.+++|++ ++++|
T Consensus 101 ~~~~v~~~~~s~d~--------~~l~~~~~~dg~v~iwd~~~----~~~---~~~~~~~~~~~~~~v~~~~~sp-~~~~l 164 (450)
T 2vdu_B 101 IYSYIRNLRLTSDE--------SRLIACADSDKSLLVFDVDK----TSK---NVLKLRKRFCFSKRPNAISIAE-DDTTV 164 (450)
T ss_dssp CCCCEEEEEECTTS--------SEEEEEEGGGTEEEEEEECS----SSS---SCEEEEEEEECSSCEEEEEECT-TSSEE
T ss_pred cCCceEEEEEcCCC--------CEEEEEECCCCeEEEEECcC----CCC---ceeeeeecccCCCCceEEEEcC-CCCEE
Confidence 45579999999998 56 49999999999999831 044 5666665 5678999999999 88999
Q ss_pred EEEeCCCcEEEEcCCCCCCCC-ccCCccCCCCCCCCCeEEEEecCC---CCcEEEEEeCCCcEEEEECCCCceeEEecCC
Q 046451 140 ASGADDGEICIWDLSAPAEPS-HFPPLRGNGSAAQGEISFVSWNSK---VQHILASTSYNGTTVVWDLKKQKPVISFSES 215 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~-~~~~l~~~~~~h~~~I~~l~~sp~---g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~ 215 (719)
++++.||.|++||+.+..... ... ...+|...|++++|+++ + .+|++++.|++|++||+++++.+..+...
T Consensus 165 ~~~~~~g~v~~~~~~~~~~~~~~~~----~~~~h~~~v~~~~~sp~~~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 239 (450)
T 2vdu_B 165 IIADKFGDVYSIDINSIPEEKFTQE----PILGHVSMLTDVHLIKDSDGH-QFIITSDRDEHIKISHYPQCFIVDKWLFG 239 (450)
T ss_dssp EEEETTSEEEEEETTSCCCSSCCCC----CSEECSSCEEEEEEEECTTSC-EEEEEEETTSCEEEEEESCTTCEEEECCC
T ss_pred EEEeCCCcEEEEecCCcccccccce----eeecccCceEEEEEcCCCCCC-cEEEEEcCCCcEEEEECCCCceeeeeecC
Confidence 999999999999998876543 111 12347789999999998 6 69999999999999999999988875557
Q ss_pred CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC-------------------------CCCCeeEE
Q 046451 216 IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG-------------------------HTKGVIAM 270 (719)
Q Consensus 216 ~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~-------------------------h~~~V~~v 270 (719)
|...|.+++|+ ++ .+|++++.|+ .|++||++++ +.+..+.. +...|.++
T Consensus 240 h~~~v~~~~~s-d~-~~l~s~~~d~---~v~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 313 (450)
T 2vdu_B 240 HKHFVSSICCG-KD-YLLLSAGGDD---KIFAWDWKTG-KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKI 313 (450)
T ss_dssp CSSCEEEEEEC-ST-TEEEEEESSS---EEEEEETTTC-CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEE
T ss_pred CCCceEEEEEC-CC-CEEEEEeCCC---eEEEEECCCC-cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEE
Confidence 99999999999 77 5889999888 9999999875 55555542 23578999
Q ss_pred EeCCCCCCeEEEEe-CCCcEEEEEC--CCC---eEEEEecCCCCCeEEeEEcCCCCCEEEEEeC------CCcEEEEeCC
Q 046451 271 SWCPNDSSYLLTCA-KDNRTICWDT--VSG---EIVSELPAGTNWNFDIHWYPKIPGVISASSF------DGKIGIYNIE 338 (719)
Q Consensus 271 ~~sp~d~~~l~sgs-~Dg~I~iwd~--~~~---~~~~~l~~h~~~v~~l~~spdg~~~las~s~------Dg~I~iwd~~ 338 (719)
+|++ ++++|++++ .|+.|+|||+ .++ +.+..+..| ..|.+++|++++ .++++++. +..|.||.+.
T Consensus 314 ~~~~-~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 314 IKSK-NLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EECS-SSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EEeC-CCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCc-EEEEEecccCCCCCCcceEEEEEE
Confidence 9999 889999998 8999999999 565 778888888 779999999965 34444443 4568888775
Q ss_pred C
Q 046451 339 G 339 (719)
Q Consensus 339 ~ 339 (719)
.
T Consensus 391 ~ 391 (450)
T 2vdu_B 391 L 391 (450)
T ss_dssp T
T ss_pred c
Confidence 4
No 97
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=2e-30 Score=276.74 Aligned_cols=255 Identities=13% Similarity=0.193 Sum_probs=207.1
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc-----ccCCEEEEEEeCCC
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR-----HKGPVRGLEFNSFT 135 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~-----h~~~V~~l~fsp~~ 135 (719)
.+|...|++++|+|+..+. ...+++++.++.|+|||+. ++ ..+..+.. |...|.+++|+++.
T Consensus 15 ~~h~~~v~~i~~~p~~~~~----~~~~~~~~~~~~v~vw~~~------~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~ 81 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEG----DPLVFATVGSNRVTLYECH------SQ---GEIRLLQSYVDADADENFYTCAWTYDS 81 (366)
T ss_dssp CTTCSCEEEEEECTTCCTT----SCEEEEEEETTEEEEEEEC------GG---GCEEEEEEEECSCTTCCEEEEEEEECT
T ss_pred cCCCCceEEEEEecccCCC----CceEEEECCCCEEEEEEcC------CC---cEEEeeeeccccCCCCcEEEEEeccCC
Confidence 3689999999999852110 0567777777899999994 33 34444443 56789999999932
Q ss_pred ---CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEe
Q 046451 136 ---PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF 212 (719)
Q Consensus 136 ---~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~ 212 (719)
+++|++|+.||.|+|||+.+.+....+ ..|...|.+++|++++..+|++++.||.|++||+++++.+..+
T Consensus 82 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 82 NTSHPLLAVAGSRGIIRIINPITMQCIKHY-------VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp TTCCEEEEEEETTCEEEEECTTTCCEEEEE-------ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCCCEEEEecCCCEEEEEEchhceEeeee-------cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe
Confidence 569999999999999999987655442 3477899999999933479999999999999999999988887
Q ss_pred c--CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC---------------------------ceEEeeCC
Q 046451 213 S--ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS---------------------------PVKEFVGH 263 (719)
Q Consensus 213 ~--~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~---------------------------~~~~~~~h 263 (719)
. ..|...|.+++|++++ .+|++++.|+ .|++||+++... ......+|
T Consensus 155 ~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (366)
T 3k26_A 155 GGVEGHRDEVLSADYDLLG-EKIMSCGMDH---SLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIH 230 (366)
T ss_dssp CSTTSCSSCEEEEEECTTS-SEEEEEETTS---CEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSC
T ss_pred cccccccCceeEEEECCCC-CEEEEecCCC---CEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCC
Confidence 2 2689999999999998 5788999888 899999986421 11223349
Q ss_pred CCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe--------------EEEEecCCCCCeEEeEEcCC--CCCEEEEEe
Q 046451 264 TKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE--------------IVSELPAGTNWNFDIHWYPK--IPGVISASS 327 (719)
Q Consensus 264 ~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~--------------~~~~l~~h~~~v~~l~~spd--g~~~las~s 327 (719)
...|.+++|+ +++|++++.|+.|++||+.+++ .+..+..|...|++++|+++ + .+|++++
T Consensus 231 ~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~~l~~~~ 306 (366)
T 3k26_A 231 RNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ-KMLALGN 306 (366)
T ss_dssp SSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS-SEEEEEC
T ss_pred cceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC-cEEEEEe
Confidence 9999999997 5699999999999999998764 47888899999999999999 8 7999999
Q ss_pred CCCcEEEEeCCCCccc
Q 046451 328 FDGKIGIYNIEGCSRY 343 (719)
Q Consensus 328 ~Dg~I~iwd~~~~~~~ 343 (719)
.||.|+|||+.+++..
T Consensus 307 ~dg~i~vwd~~~~~~~ 322 (366)
T 3k26_A 307 QVGKLYVWDLEVEDPH 322 (366)
T ss_dssp TTSCEEEEECCSSSGG
T ss_pred cCCcEEEEECCCCCCc
Confidence 9999999999998654
No 98
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.9e-30 Score=275.83 Aligned_cols=253 Identities=19% Similarity=0.319 Sum_probs=209.4
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC-CCCEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF-TPNLL 139 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~-~~~~l 139 (719)
.+|...|++++|++++ .+|++|+.||.|+|||+.. .+. ..+..+.+|.+.|.+++|++. ++++|
T Consensus 8 ~~h~~~v~~~~~s~~~--------~~l~~~~~dg~i~iw~~~~----~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~l 72 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYG--------KRLATCSSDKTIKIFEVEG----ETH---KLIDTLTGHEGPVWRVDWAHPKFGTIL 72 (379)
T ss_dssp EECCCCEEEEEECSSS--------SEEEEEETTSCEEEEEEET----TEE---EEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred cCCcccEEEEEEcCCC--------CEEEEEECCCcEEEEecCC----Ccc---eeeeEecCCCCcEEEEEeCCCCCCCEE
Confidence 4689999999999998 7999999999999999842 133 667788899999999999872 28999
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCC--CCcEEEEEeCCCcEEEEECCCCce--eEEecCC
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK--VQHILASTSYNGTTVVWDLKKQKP--VISFSES 215 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~--g~~~l~s~s~dg~I~iwd~~~~~~--~~~~~~~ 215 (719)
++++.||.|+|||+.+++.... .....|...|.+++|+++ + .+|++++.||.|++||+++... ...+. .
T Consensus 73 ~s~~~dg~v~iwd~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~ 145 (379)
T 3jrp_A 73 ASCSYDGKVLIWKEENGRWSQI-----AVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPIIID-A 145 (379)
T ss_dssp EEEETTSCEEEEEEETTEEEEE-----EEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCTTSCCCEEEEE-C
T ss_pred EEeccCCEEEEEEcCCCceeEe-----eeecCCCcceEEEEeCCCCCC-CEEEEecCCCcEEEEecCCCCceeeEEec-C
Confidence 9999999999999988752111 112347789999999998 6 6999999999999999998743 33444 6
Q ss_pred CCCceeEEEECCC------------CCcEEEEEeCCCCCCcEEEEecCCCCC---ceEEeeCCCCCeeEEEeCCCC---C
Q 046451 216 IKRRCSVLQWNPD------------VATQLVVASDEDSSPALRLWDMRNTMS---PVKEFVGHTKGVIAMSWCPND---S 277 (719)
Q Consensus 216 ~~~~i~~l~~sp~------------g~~~l~~~s~d~~~~~I~lwDl~~~~~---~~~~~~~h~~~V~~v~~sp~d---~ 277 (719)
|...|.+++|++. ...+|++++.|+ .|++||+++... .+..+.+|...|.+++|+| + +
T Consensus 146 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~ 221 (379)
T 3jrp_A 146 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN---LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLR 221 (379)
T ss_dssp CTTCEEEEEECCCC----------CTTCEEEEEETTS---CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSS
T ss_pred CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC---eEEEEEecCCCcceeeEEEEecccCcEeEEEECC-CCCCC
Confidence 8899999999994 236899999998 899999986543 3456788999999999999 6 8
Q ss_pred CeEEEEeCCCcEEEEECCCCe-----EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 046451 278 SYLLTCAKDNRTICWDTVSGE-----IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 278 ~~l~sgs~Dg~I~iwd~~~~~-----~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~ 340 (719)
.+|++++.||.|+|||+++++ .+.....|...|++++|++++ .+|++++.||.|+||++...
T Consensus 222 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 222 SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS-CCEEEEESSSSEEEEEEEET
T ss_pred CeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCC-CEEEEecCCCcEEEEeCCCC
Confidence 999999999999999998863 222233488899999999999 78999999999999999843
No 99
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=2.1e-29 Score=277.98 Aligned_cols=274 Identities=15% Similarity=0.262 Sum_probs=233.8
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
|.+.|.+++|+ +++|++|+.||.| ++||+..++... ....|...|.+++|+. +
T Consensus 158 h~~~v~~~~~~--~~~l~s~~~dg~i----------~vwd~~~~~~~~-----~~~~h~~~v~~~~~~~----------~ 210 (445)
T 2ovr_B 158 HTGGVWSSQMR--DNIIISGSTDRTL----------KVWNAETGECIH-----TLYGHTSTVRCMHLHE----------K 210 (445)
T ss_dssp CSSCEEEEEEE--TTEEEEEETTSCE----------EEEETTTTEEEE-----EECCCSSCEEEEEEET----------T
T ss_pred CCCCEEEEEec--CCEEEEEeCCCeE----------EEEECCcCcEEE-----EECCCCCcEEEEEecC----------C
Confidence 56789999997 6799999988877 889887554322 2246889999999963 5
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
.|++|+.||.|++||+ .++ +.+..+.+|...|.+++| ++++|++++.||.|++||+.+.+....+
T Consensus 211 ~l~s~s~dg~i~~wd~------~~~---~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~--- 275 (445)
T 2ovr_B 211 RVVSGSRDATLRVWDI------ETG---QCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTL--- 275 (445)
T ss_dssp EEEEEETTSEEEEEES------SSC---CEEEEEECCSSCEEEEEE---CSSCEEEEETTSCEEEEEGGGTEEEEEE---
T ss_pred EEEEEeCCCEEEEEEC------CCC---cEEEEEcCCcccEEEEEE---CCCEEEEEcCCCEEEEEECCCCcEeEEe---
Confidence 8999999999999999 455 778889999999999999 5689999999999999999887655442
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
..|...|.++.| ++ .+|++++.||.|++||+++++.+..+. .|...+.++.++. .++++++.|+ .|
T Consensus 276 ----~~~~~~v~~~~~--~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~---~~l~~~~~dg---~i 341 (445)
T 2ovr_B 276 ----QGHTNRVYSLQF--DG-IHVVSGSLDTSIRVWDVETGNCIHTLT-GHQSLTSGMELKD---NILVSGNADS---TV 341 (445)
T ss_dssp ----CCCSSCEEEEEE--CS-SEEEEEETTSCEEEEETTTCCEEEEEC-CCCSCEEEEEEET---TEEEEEETTS---CE
T ss_pred ----cCCCCceEEEEE--CC-CEEEEEeCCCeEEEEECCCCCEEEEEc-CCcccEEEEEEeC---CEEEEEeCCC---eE
Confidence 347779999999 43 589999999999999999999999888 7888999988853 4789999888 89
Q ss_pred EEEecCCCCCceEEeeC---CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEe-----cCCCCCeEEeEEcC
Q 046451 246 RLWDMRNTMSPVKEFVG---HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSEL-----PAGTNWNFDIHWYP 317 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~~---h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l-----~~h~~~v~~l~~sp 317 (719)
++||+++. +.+..+.+ |...|.+++|+ +++|++++.||.|++||+.+++.+..+ ..|...|++++|++
T Consensus 342 ~vwd~~~~-~~~~~~~~~~~~~~~v~~~~~~---~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 417 (445)
T 2ovr_B 342 KIWDIKTG-QCLQTLQGPNKHQSAVTCLQFN---KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN 417 (445)
T ss_dssp EEEETTTC-CEEEEECSTTSCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECS
T ss_pred EEEECCCC-cEEEEEccCCCCCCCEEEEEEC---CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecC
Confidence 99999875 66777776 88899999995 479999999999999999999998888 46788899999999
Q ss_pred CCCCEEEEEeCCCc----EEEEeCCCC
Q 046451 318 KIPGVISASSFDGK----IGIYNIEGC 340 (719)
Q Consensus 318 dg~~~las~s~Dg~----I~iwd~~~~ 340 (719)
++ .+|++++.||+ |.|||++..
T Consensus 418 ~~-~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 418 TK-LVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp SE-EEEEEECSSSSSCCEEEEEECCCC
T ss_pred CE-EEEEEcccCCCCccEEEEEECCCC
Confidence 98 79999999998 999999764
No 100
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=1.1e-29 Score=278.18 Aligned_cols=266 Identities=19% Similarity=0.315 Sum_probs=209.1
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
+.+.|++|+|+|||++||+|+.||.| +|||+..+... ....+|...+.+++|+. .
T Consensus 146 ~~~~V~sv~fspdg~~lasgs~Dg~v----------~iWd~~~~~~~-----~~~~~h~~~v~~~s~~~----------~ 200 (420)
T 4gga_A 146 PGEYISSVAWIKEGNYLAVGTSSAEV----------QLWDVQQQKRL-----RNMTSHSARVGSLSWNS----------Y 200 (420)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCE----------EEEETTTTEEE-----EEECCCSSCEEEEEEET----------T
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeE----------EEEEcCCCcEE-----EEEeCCCCceEEEeeCC----------C
Confidence 44679999999999999999988877 88988755432 23356889999999864 5
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|++|+.|+.+++||... .. ..+..+.+|...+..+.|++ ++++|++++.|+.|+|||+.+++.....
T Consensus 201 ~l~sgs~d~~i~~~d~~~-----~~---~~~~~~~~h~~~~~~~~~~~-~g~~l~s~~~D~~v~i~~~~~~~~~~~~--- 268 (420)
T 4gga_A 201 ILSSGSRSGHIHHHDVRV-----AE---HHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVP--- 268 (420)
T ss_dssp EEEEEETTSEEEEEETTS-----SS---CEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCCSSCSCC---
T ss_pred EEEEEeCCCceeEeeecc-----cc---eeeEEecccccceeeeeecC-CCCeeeeeeccccceEEeecccccccee---
Confidence 899999999999999842 22 56778899999999999999 8899999999999999999887654331
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEE--eCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEe-CCCCC
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILAST--SYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVAS-DEDSS 242 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~--s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s-~d~~~ 242 (719)
......|...|.+++|++.+..+++++ +.|++|++||+++++.+..+. ....+.++.|++++..++++++ .|+
T Consensus 269 ~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~--~~~~v~~~~~~~~~~~lv~~sg~~d~-- 344 (420)
T 4gga_A 269 LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--AHSQVCSILWSPHYKELISGHGFAQN-- 344 (420)
T ss_dssp SEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE--CSSCEEEEEEETTTTEEEEEECTTTC--
T ss_pred eeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec--cccceeeeeecCCCCeEEEEEecCCC--
Confidence 122345778999999999988888765 479999999999999998887 5678899999999865554443 455
Q ss_pred CcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEE
Q 046451 243 PALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHW 315 (719)
Q Consensus 243 ~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~ 315 (719)
.|+|||+++. +++.++.+|...|++++|+| ++.+|++|+.|++|+|||+.........+.+...+....|
T Consensus 345 -~I~iwd~~~~-~~v~~l~gH~~~V~~l~~sp-dg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s~ 414 (420)
T 4gga_A 345 -QLVIWKYPTM-AKVAELKGHTSRVLSLTMSP-DGATVASAAADETLRLWRCFELDPARRREREKASAAKSSL 414 (420)
T ss_dssp -CEEEEETTTC-CEEEEECCCSSCEEEEEECT-TSSCEEEEETTTEEEEECCSCSSCC---------------
T ss_pred -EEEEEECCCC-cEEEEEcCCCCCEEEEEEcC-CCCEEEEEecCCeEEEEECCCCCccchhhhccCCcccccc
Confidence 8999999875 77899999999999999999 9999999999999999999877666555555444433333
No 101
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=9.9e-30 Score=270.50 Aligned_cols=253 Identities=17% Similarity=0.283 Sum_probs=202.4
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcC---CCcEEEEcCCccccCCCCCCCCce-eeeccccCCEEEEEEeCCC-
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLV---DGSIDIWNPLSLISSGETGGNPLI-AHLSRHKGPVRGLEFNSFT- 135 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~---dg~I~lwd~~~~~~~~~~~~~~~~-~~l~~h~~~V~~l~fsp~~- 135 (719)
.+|...|++++|++++. .++++|+. ||.|+|||+. ++ ... .....|...|.+++|++++
T Consensus 15 ~~h~~~v~~~~~~p~~~-------~l~~~~s~~~~d~~v~iw~~~------~~---~~~~~~~~~~~~~v~~~~~~~~~~ 78 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSA-------KFVTMGNFARGTGVIQLYEIQ------HG---DLKLLREIEKAKPIKCGTFGATSL 78 (357)
T ss_dssp EECSSCEEEEEECTTSS-------EEEEEEC--CCCEEEEEEEEC------SS---SEEEEEEEEESSCEEEEECTTCCT
T ss_pred cCCCCceEEEEEcCCCc-------eEEEecCccCCCcEEEEEeCC------CC---cccceeeecccCcEEEEEEcCCCC
Confidence 45899999999999874 56777776 9999999984 33 333 2234799999999999943
Q ss_pred -CCEEEEEeCCCcEEEEcCCCCC-CCCccCCccCCCCCCCCCeEEEEe------cCCCCcEEEEEeCCCcEEEEECCCCc
Q 046451 136 -PNLLASGADDGEICIWDLSAPA-EPSHFPPLRGNGSAAQGEISFVSW------NSKVQHILASTSYNGTTVVWDLKKQK 207 (719)
Q Consensus 136 -~~~lasgs~dg~I~iwdl~~~~-~~~~~~~l~~~~~~h~~~I~~l~~------sp~g~~~l~s~s~dg~I~iwd~~~~~ 207 (719)
+++|++++.||.|++||+.+.+ .... + ..|...|.+++| ++++ .+|++++.||.|++||+++++
T Consensus 79 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~----~~~~~~v~~~~~~~~~~~s~~~-~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 79 QQRYLATGDFGGNLHIWNLEAPEMPVYS---V----KGHKEIINAIDGIGGLGIGEGA-PEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp TTCCEEEEETTSCEEEECTTSCSSCSEE---E----CCCSSCEEEEEEESGGGCC-CC-CEEEEEETTSCEEEECTTSCS
T ss_pred CCceEEEecCCCeEEEEeCCCCCccEEE---E----EecccceEEEeeccccccCCCc-cEEEEEeCCCeEEEEeCCCCC
Confidence 6999999999999999999876 3333 2 357889999965 5675 599999999999999999887
Q ss_pred -eeEEecC---CCCCceeEEE----ECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCC--CC
Q 046451 208 -PVISFSE---SIKRRCSVLQ----WNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPN--DS 277 (719)
Q Consensus 208 -~~~~~~~---~~~~~i~~l~----~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~--d~ 277 (719)
.+..+.. .....+.+++ |++++ .++++++.++ .|++||+++.. ......|...|.+++|++. ++
T Consensus 151 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~~~~~d~---~i~i~d~~~~~--~~~~~~~~~~v~~~~~~~~~~~~ 224 (357)
T 3i2n_A 151 DPVANMEPVQGENKRDCWTVAFGNAYNQEE-RVVCAGYDNG---DIKLFDLRNMA--LRWETNIKNGVCSLEFDRKDISM 224 (357)
T ss_dssp SCSEEECCCTTSCCCCEEEEEEECCCC-CC-CEEEEEETTS---EEEEEETTTTE--EEEEEECSSCEEEEEESCSSSSC
T ss_pred CcceeccccCCCCCCceEEEEEEeccCCCC-CEEEEEccCC---eEEEEECccCc--eeeecCCCCceEEEEcCCCCCCC
Confidence 5666652 1234788888 77887 5888999888 99999998753 3445678899999999985 57
Q ss_pred CeEEEEeCCCcEEEEECCCCeEEEEec-----CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 278 SYLLTCAKDNRTICWDTVSGEIVSELP-----AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 278 ~~l~sgs~Dg~I~iwd~~~~~~~~~l~-----~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
.+|++++.||.|++||+++++.+..+. +|...|++++|++++..+|++++.||.|+|||+......
T Consensus 225 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 225 NKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp CEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC
T ss_pred CEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccc
Confidence 899999999999999998776544443 899999999999999448999999999999999876543
No 102
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.1e-29 Score=276.47 Aligned_cols=260 Identities=15% Similarity=0.211 Sum_probs=207.1
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
.....++++++.. .++++++.||.|+||++... +.....+..+.+|.+.|.+++|+++++++|++|+.
T Consensus 35 ~~~~~~~~~~~~~-------~~~~~~~~~g~i~v~~~~~~-----~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~ 102 (402)
T 2aq5_A 35 WDSGFCAVNPKFM-------ALICEASGGGAFLVLPLGKT-----GRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSE 102 (402)
T ss_dssp CSSCSEEECSSEE-------EEEBCCSSSCCEEEEETTCC-----EECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEET
T ss_pred cCCCcEEECCCeE-------EEEEEEcCCCEEEEEECccC-----CCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeC
Confidence 3445688888752 34556889999999998531 11113455678899999999999977899999999
Q ss_pred CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec-CCCCCceeEE
Q 046451 145 DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS-ESIKRRCSVL 223 (719)
Q Consensus 145 dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~-~~~~~~i~~l 223 (719)
||.|+|||+.+...............+|...|.+++|++++.++|++++.||.|++||+++++.+..+. ..|...|.++
T Consensus 103 dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 182 (402)
T 2aq5_A 103 DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSV 182 (402)
T ss_dssp TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEE
T ss_pred CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEE
Confidence 999999999987543221111222345788999999999986799999999999999999999998883 2789999999
Q ss_pred EECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEe-eCCCCC-eeEEEeCCCCCCeEEEE---eCCCcEEEEECCCCe
Q 046451 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF-VGHTKG-VIAMSWCPNDSSYLLTC---AKDNRTICWDTVSGE 298 (719)
Q Consensus 224 ~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~-~~h~~~-V~~v~~sp~d~~~l~sg---s~Dg~I~iwd~~~~~ 298 (719)
+|++++ .+|++++.|+ .|++||+++. +.+..+ .+|... +.++.|++ ++.+|++| +.|+.|++||+++++
T Consensus 183 ~~~~~~-~~l~~~~~d~---~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 183 DWSRDG-ALICTSCRDK---RVRVIEPRKG-TVVAEKDRPHEGTRPVHAVFVS-EGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp EECTTS-SCEEEEETTS---EEEEEETTTT-EEEEEEECSSCSSSCCEEEECS-TTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred EECCCC-CEEEEEecCC---cEEEEeCCCC-ceeeeeccCCCCCcceEEEEcC-CCcEEEEeccCCCCceEEEEcCcccc
Confidence 999998 4788888888 9999999875 556666 678775 89999999 88999998 799999999998865
Q ss_pred E-EEEec-CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 299 I-VSELP-AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 299 ~-~~~l~-~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
. +.... .|...+.+++|++++..++++++.||.|++||+.+++.
T Consensus 257 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 257 EPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp SCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred CCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 4 32222 56677999999999944445677899999999998873
No 103
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=1.4e-29 Score=268.16 Aligned_cols=277 Identities=14% Similarity=0.095 Sum_probs=222.4
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCC-EE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN-LL 139 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~-~l 139 (719)
..|.+.|++++|++++ .+|++++.||.|+|||+. ++........+..|...|.+++|++ +++ +|
T Consensus 8 ~~h~~~v~~~~~s~~~--------~~l~~~~~d~~v~iw~~~------~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l 72 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSK--------SLLLITSWDGSLTVYKFD------IQAKNVDLLQSLRYKHPLLCCNFID-NTDLQI 72 (342)
T ss_dssp SCCSSCEEEEEEEGGG--------TEEEEEETTSEEEEEEEE------TTTTEEEEEEEEECSSCEEEEEEEE-SSSEEE
T ss_pred cCCCCcEEEEEEcCCC--------CEEEEEcCCCeEEEEEeC------CCCccccceeeeecCCceEEEEECC-CCCcEE
Confidence 3688999999999998 799999999999999984 3311123556668999999999999 789 99
Q ss_pred EEEeCCCcEEEEcC-CCCCCCCccCCccCCCCC--CCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC---------Cc
Q 046451 140 ASGADDGEICIWDL-SAPAEPSHFPPLRGNGSA--AQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK---------QK 207 (719)
Q Consensus 140 asgs~dg~I~iwdl-~~~~~~~~~~~l~~~~~~--h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~---------~~ 207 (719)
++++.||.|++||+ .+... .. ... |...|.+++|++ + .+|++++.|+.|++||+++ ++
T Consensus 73 ~~~~~dg~i~~wd~~~~~~~-~~-------~~~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 142 (342)
T 1yfq_A 73 YVGTVQGEILKVDLIGSPSF-QA-------LTNNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKNL 142 (342)
T ss_dssp EEEETTSCEEEECSSSSSSE-EE-------CBSCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEEEES
T ss_pred EEEcCCCeEEEEEeccCCce-Ee-------ccccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccccCC
Confidence 99999999999999 76643 12 123 778999999999 5 6999999999999999997 77
Q ss_pred eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC-CCC-ceEEeeCCCCCeeEEEeCCCCCCeEEEEeC
Q 046451 208 PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN-TMS-PVKEFVGHTKGVIAMSWCPNDSSYLLTCAK 285 (719)
Q Consensus 208 ~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~-~~~-~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~ 285 (719)
.+..+. +...+.+++|++++ +++++.++ .|++||+++ ... .......|...|.+++|++.++++|++++.
T Consensus 143 ~~~~~~--~~~~v~~~~~~~~~---l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 214 (342)
T 1yfq_A 143 NSNNTK--VKNKIFTMDTNSSR---LIVGMNNS---QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI 214 (342)
T ss_dssp CSSSSS--SCCCEEEEEECSSE---EEEEESTT---EEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET
T ss_pred eeeEEe--eCCceEEEEecCCc---EEEEeCCC---eEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEec
Confidence 666665 88899999999885 88888887 899999987 443 233455688899999999745689999999
Q ss_pred CCcEEEEECCCC------eEEEEecCCCC---------CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCC
Q 046451 286 DNRTICWDTVSG------EIVSELPAGTN---------WNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNF 350 (719)
Q Consensus 286 Dg~I~iwd~~~~------~~~~~l~~h~~---------~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~ 350 (719)
||.|+|||++.. +.+..+..|.. .|.+++|++++ .+|++++.||.|++||+.+++.+.......
T Consensus 215 dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h 293 (342)
T 1yfq_A 215 DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH-KFLYTAGSDGIISCWNLQTRKKIKNFAKFN 293 (342)
T ss_dssp TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT-CCEEEEETTSCEEEEETTTTEEEEECCCCS
T ss_pred CCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCC-CEEEEecCCceEEEEcCccHhHhhhhhccc
Confidence 999999999877 77788888765 89999999998 789999999999999999988765322110
Q ss_pred CCCCccCcceecCCCceeeeeCCcEEEEccCCC
Q 046451 351 SAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 351 ~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
..+. ..++ .+|++++....++
T Consensus 294 -------~~~v---~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 294 -------EDSV---VKIA--CSDNILCLATSDD 314 (342)
T ss_dssp -------SSEE---EEEE--ECSSEEEEEEECT
T ss_pred -------CCCc---eEec--CCCCeEEEEecCC
Confidence 0011 2233 8888777665544
No 104
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=1.9e-29 Score=273.22 Aligned_cols=314 Identities=14% Similarity=0.204 Sum_probs=233.1
Q ss_pred ceEEEEEeeccCCcccceeecccCCCCCceeeeecC-CCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCcee
Q 046451 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGK-NGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIA 117 (719)
Q Consensus 39 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp-~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~ 117 (719)
..+++|+++....... ...|...|++++|++ ++ .+|++|+.||.|+|||+..... .....
T Consensus 23 ~~~~v~~~~~~~~~~~-----~~~h~~~v~~~~~s~~~~--------~~l~~~~~dg~i~iw~~~~~~~------~~~~~ 83 (408)
T 4a11_B 23 STRRVLGLELNKDRDV-----ERIHGGGINTLDIEPVEG--------RYMLSGGSDGVIVLYDLENSSR------QSYYT 83 (408)
T ss_dssp HHHHHHTEEECTTEEE-----CCCCSSCEEEEEECTTTC--------CEEEEEETTSCEEEEECCCCSS------SSCEE
T ss_pred CcceeeccccCcceee-----eeccCCcEEEEEEecCCC--------CEEEEEcCCCeEEEEECCCCcc------cceEe
Confidence 3456777776544332 245899999999999 87 7999999999999999953211 01111
Q ss_pred e----------eccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCC-
Q 046451 118 H----------LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQ- 186 (719)
Q Consensus 118 ~----------l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~- 186 (719)
. ..+|...|.+++|++.++++|++++.||.|++||+.+.+....+ .+...+.++.|++.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 155 (408)
T 4a11_B 84 CKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF--------NFEETVYSHHMSPVSTK 155 (408)
T ss_dssp ECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEE--------ECSSCEEEEEECSSCSS
T ss_pred ccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceec--------cCCCceeeeEeecCCCC
Confidence 0 12599999999999977889999999999999999987655442 1455789999988532
Q ss_pred -cEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEe-----
Q 046451 187 -HILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF----- 260 (719)
Q Consensus 187 -~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~----- 260 (719)
.++++++.||.|++||+++++.+..+. .|...|.+++|++++..+|++++.|+ .|++||+++....+..+
T Consensus 156 ~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ll~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~ 231 (408)
T 4a11_B 156 HCLVAVGTRGPKVQLCDLKSGSCSHILQ-GHRQEILAVSWSPRYDYILATASADS---RVKLWDVRRASGCLITLDQHNG 231 (408)
T ss_dssp CCEEEEEESSSSEEEEESSSSCCCEEEC-CCCSCEEEEEECSSCTTEEEEEETTS---CEEEEETTCSSCCSEECCTTTT
T ss_pred CcEEEEEcCCCeEEEEeCCCcceeeeec-CCCCcEEEEEECCCCCcEEEEEcCCC---cEEEEECCCCCccccccccccc
Confidence 489999999999999999999888888 78999999999999987899999998 89999998776555555
Q ss_pred ----------eCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC----CCeEEeEEcCCCCCEEEEE
Q 046451 261 ----------VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT----NWNFDIHWYPKIPGVISAS 326 (719)
Q Consensus 261 ----------~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~----~~v~~l~~spdg~~~las~ 326 (719)
..|...|.+++|++ ++++|++++.||.|++||+.+++....+..+. .....+.+..+....++++
T Consensus 232 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (408)
T 4a11_B 232 KKSQAVESANTAHNGKVNGLCFTS-DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFV 310 (408)
T ss_dssp CSCCCTTTSSCSCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEE
T ss_pred ccceeeccccccccCceeEEEEcC-CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEE
Confidence 57889999999999 99999999999999999999988765544321 1112233333333566667
Q ss_pred eCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCC-CceeeeeCCcEEEEccCCCCCc
Q 046451 327 SFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRP-AGASFGFGGKLVSFHPKSSAGH 386 (719)
Q Consensus 327 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~-~~~s~s~~Gklv~~~~~~~~~~ 386 (719)
+.|+.|++||+.+++.+....... ..+....|.... ..++.+.||.+..|..+.....
T Consensus 311 ~~~~~i~v~d~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 311 PYGSTIAVYTVYSGEQITMLKGHY--KTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp EETTEEEEEETTTCCEEEEECCCS--SCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred ecCCEEEEEECcCCcceeeeccCC--CeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 779999999999988766433221 223444555543 2445556777777776665444
No 105
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.3e-28 Score=268.07 Aligned_cols=281 Identities=19% Similarity=0.328 Sum_probs=215.5
Q ss_pred CceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc-ccCCEEEEEEeCCCCCEEEEEeC
Q 046451 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR-HKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 66 ~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~-h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
.+.+++|+.+ .+++++.||.|++||+ .++ .....+.. |...|.+++|++ ++++|++|+.
T Consensus 95 ~~~~~~~s~~----------~l~~~~~d~~v~lw~~------~~~---~~~~~~~~~~~~~v~~v~~s~-~~~~l~~~~~ 154 (401)
T 4aez_A 95 YLNLLDWSNL----------NVVAVALERNVYVWNA------DSG---SVSALAETDESTYVASVKWSH-DGSFLSVGLG 154 (401)
T ss_dssp TCBCEEECTT----------SEEEEEETTEEEEEET------TTC---CEEEEEECCTTCCEEEEEECT-TSSEEEEEET
T ss_pred eEEEEeecCC----------CEEEEECCCeEEEeeC------CCC---cEeEeeecCCCCCEEEEEECC-CCCEEEEECC
Confidence 3555777753 5777889999999999 444 55555544 889999999999 8899999999
Q ss_pred CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC-CceeEEecCCCCCceeEE
Q 046451 145 DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK-QKPVISFSESIKRRCSVL 223 (719)
Q Consensus 145 dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~-~~~~~~~~~~~~~~i~~l 223 (719)
||.|+|||+.+++....+ ..|...|.+++|+. ++|++++.||.|++||++. ...+..+. .|...|.++
T Consensus 155 dg~i~iwd~~~~~~~~~~-------~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~ 223 (401)
T 4aez_A 155 NGLVDIYDVESQTKLRTM-------AGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQ-GHSSEVCGL 223 (401)
T ss_dssp TSCEEEEETTTCCEEEEE-------CCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEE
T ss_pred CCeEEEEECcCCeEEEEe-------cCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcceeeEEc-CCCCCeeEE
Confidence 999999999987755442 35788999999943 5899999999999999994 55566666 799999999
Q ss_pred EECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe--CCCcEEEEECCCCeEEE
Q 046451 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA--KDNRTICWDTVSGEIVS 301 (719)
Q Consensus 224 ~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs--~Dg~I~iwd~~~~~~~~ 301 (719)
+|++++ .+|++++.|+ .|++||+++. ..+..+..|...|.+++|++++..++++++ .|+.|++||+.+++.+.
T Consensus 224 ~~~~~~-~~l~s~~~d~---~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 224 AWRSDG-LQLASGGNDN---VVQIWDARSS-IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVN 298 (401)
T ss_dssp EECTTS-SEEEEEETTS---CEEEEETTCS-SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEE
T ss_pred EEcCCC-CEEEEEeCCC---eEEEccCCCC-CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEE
Confidence 999997 5899999988 8999999874 667788899999999999995556677765 79999999999999998
Q ss_pred EecCCCCCeEEeEEcCCCCCEEEE--EeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCC-ceeeeeCCcEEEE
Q 046451 302 ELPAGTNWNFDIHWYPKIPGVISA--SSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPA-GASFGFGGKLVSF 378 (719)
Q Consensus 302 ~l~~h~~~v~~l~~spdg~~~las--~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~-~~s~s~~Gklv~~ 378 (719)
.+. +...|.+++|++++ .+|++ |+.||.|+|||+.+++.....+.......+....|..... .++.+.||.+..|
T Consensus 299 ~~~-~~~~v~~~~~s~~~-~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw 376 (401)
T 4aez_A 299 TVD-AGSQVTSLIWSPHS-KEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFW 376 (401)
T ss_dssp EEE-CSSCEEEEEECSSS-SEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEE
T ss_pred EEe-CCCcEEEEEECCCC-CeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 886 45669999999999 67776 4489999999999876544221111112223344544432 3444556666666
Q ss_pred ccCCCC
Q 046451 379 HPKSSA 384 (719)
Q Consensus 379 ~~~~~~ 384 (719)
...++.
T Consensus 377 ~~~~~~ 382 (401)
T 4aez_A 377 RVYDGD 382 (401)
T ss_dssp ECCC--
T ss_pred ECCCCc
Confidence 655544
No 106
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=8.3e-29 Score=272.23 Aligned_cols=265 Identities=22% Similarity=0.337 Sum_probs=211.4
Q ss_pred ccccCccceEEEcCC-CCeEEEeeccceeecccCCCceEEEEEeeccCCcc-----cceeecccCCCCCceeeeecCCCC
Q 046451 4 IKGINRSASVAFAPD-APYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDR-----DLLLVGESPSSERFNRLAWGKNGS 77 (719)
Q Consensus 4 l~~~~~V~~vafSpd-g~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~-----~~~~~~~~~~~~~V~~l~~sp~g~ 77 (719)
+.|.+.|++++|+|+ +++||+|+.+|.| +||++....... ...+.....|...|++|+|++++.
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V----------~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~ 194 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDV----------LVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLN 194 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCE----------EEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTST
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcE----------EEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCC
Confidence 557789999999998 6899999887766 889987521110 111233356889999999999973
Q ss_pred CCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCC
Q 046451 78 GSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPA 157 (719)
Q Consensus 78 ~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~ 157 (719)
.+|++|+.||.|++||+..... ..........+..|...|.+++|++.++.+|++++.||.|++||+++..
T Consensus 195 -------~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~ 265 (430)
T 2xyi_A 195 -------GYLLSASDDHTICLWDINATPK--EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN 265 (430)
T ss_dssp -------TEEEEECTTSCEEEEETTSCCB--GGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSC
T ss_pred -------CeEEEEeCCCeEEEEeCCCCCC--CCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 4999999999999999953110 0000012456778999999999999778899999999999999999874
Q ss_pred CCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC-CceeEEecCCCCCceeEEEECCCCCcEEEEE
Q 046451 158 EPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK-QKPVISFSESIKRRCSVLQWNPDVATQLVVA 236 (719)
Q Consensus 158 ~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~-~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~ 236 (719)
....+..+ ..|...|++++|++++..+|++|+.||.|++||+++ .+.+..+. .|...|.+++|+++++.+|+++
T Consensus 266 ~~~~~~~~----~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~ 340 (430)
T 2xyi_A 266 TSKPSHTV----DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASS 340 (430)
T ss_dssp SSSCSEEE----ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTTEEEEE
T ss_pred CCcceeEe----ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCCEEEEE
Confidence 22221112 257789999999999877899999999999999998 55677777 7899999999999998889999
Q ss_pred eCCCCCCcEEEEecCCCC-------------CceEEeeCCCCCeeEEEeCCCCCC-eEEEEeCCCcEEEEECCC
Q 046451 237 SDEDSSPALRLWDMRNTM-------------SPVKEFVGHTKGVIAMSWCPNDSS-YLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 237 s~d~~~~~I~lwDl~~~~-------------~~~~~~~~h~~~V~~v~~sp~d~~-~l~sgs~Dg~I~iwd~~~ 296 (719)
+.|+ .|+|||++... ..+..+.+|...|.+++|++ ++. +|++++.||.|+||++..
T Consensus 341 ~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 341 GTDR---RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP-NEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp ETTS---CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECS-SSTTEEEEEETTSEEEEEEECH
T ss_pred eCCC---cEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECC-CCCCEEEEEECCCCEEEeEccc
Confidence 9998 89999998632 45667788999999999999 666 899999999999999864
No 107
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=1.7e-28 Score=269.23 Aligned_cols=286 Identities=12% Similarity=0.097 Sum_probs=227.6
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
...+.+++|+|+++++++++.++.| ++||+..++....+.......|...|++++|++++ .+
T Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~~i----------~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~ 183 (433)
T 3bws_A 122 GFQPKSVRFIDNTRLAIPLLEDEGM----------DVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHN--------EL 183 (433)
T ss_dssp SSCBCCCEESSSSEEEEEBTTSSSE----------EEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGT--------EE
T ss_pred CCCceEEEEeCCCeEEEEeCCCCeE----------EEEECCCCeEeeecCcccccccCCceeEEEEcCCC--------EE
Confidence 4567799999988888888766655 88988765543322222334688899999999987 79
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE-EEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL-ASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l-asgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+++++.|+.|++||+ .++ +.+..+..|...+.+++|++ ++++| ++++.|+.|++||+.+++....+
T Consensus 184 ~~s~~~d~~v~~~d~------~~~---~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~~~~~--- 250 (433)
T 3bws_A 184 WVSQMQANAVHVFDL------KTL---AYKATVDLTGKWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLEIRKT--- 250 (433)
T ss_dssp EEEEGGGTEEEEEET------TTC---CEEEEEECSSSSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEEC---
T ss_pred EEEECCCCEEEEEEC------CCc---eEEEEEcCCCCCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcEEEEe---
Confidence 999999999999999 445 67777888999999999999 66666 55668999999999887654332
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEe--------CCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEe
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTS--------YNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVAS 237 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s--------~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s 237 (719)
. ....+.+++|++++. +|++++ .||.|++||+++++.+..+. +...+.+++|+++++.++++++
T Consensus 251 ~-----~~~~~~~~~~~~~g~-~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~ 322 (433)
T 3bws_A 251 D-----KIGLPRGLLLSKDGK-ELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG--PPGNKRHIVSGNTENKIYVSDM 322 (433)
T ss_dssp C-----CCSEEEEEEECTTSS-EEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE--EEECEEEEEECSSTTEEEEEET
T ss_pred c-----CCCCceEEEEcCCCC-EEEEEECCCCccccCCCeEEEEECCCCcEEeecc--CCCCcceEEECCCCCEEEEEec
Confidence 1 233589999999985 666666 58899999999998877765 5668899999999977777778
Q ss_pred CCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeC---------------CCcEEEEECCCCeEEEE
Q 046451 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAK---------------DNRTICWDTVSGEIVSE 302 (719)
Q Consensus 238 ~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~---------------Dg~I~iwd~~~~~~~~~ 302 (719)
.++ .|++||+++. +.+..+. +...+.+++|++ ++++|++++. ||.|++||+.+++.+..
T Consensus 323 ~~~---~v~v~d~~~~-~~~~~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 323 CCS---KIEVYDLKEK-KVQKSIP-VFDKPNTIALSP-DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp TTT---EEEEEETTTT-EEEEEEE-CSSSEEEEEECT-TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred CCC---EEEEEECCCC-cEEEEec-CCCCCCeEEEcC-CCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 777 9999999864 4455554 678899999999 8888888876 57999999999999988
Q ss_pred ecCCCCCeEEeEEcCCCCCEEEEEe-CCCcEEEEeCCC
Q 046451 303 LPAGTNWNFDIHWYPKIPGVISASS-FDGKIGIYNIEG 339 (719)
Q Consensus 303 l~~h~~~v~~l~~spdg~~~las~s-~Dg~I~iwd~~~ 339 (719)
+..+ ..+.+++|++++ .+|++++ .|+.|++|++++
T Consensus 397 ~~~~-~~~~~~~~s~dg-~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 397 WEAG-NQPTGLDVSPDN-RYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EECS-SSEEEEEECTTS-CEEEEEETTTTEEEEEEETT
T ss_pred ecCC-CCCceEEEcCCC-CEEEEEECCCCeEEEEEecC
Confidence 8775 469999999999 5666555 599999999874
No 108
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=1.8e-28 Score=261.38 Aligned_cols=281 Identities=13% Similarity=0.241 Sum_probs=218.9
Q ss_pred ccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE
Q 046451 60 ESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL 139 (719)
Q Consensus 60 ~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l 139 (719)
...|...|++++|++++.+. .+|++|+.||.|+|||+.+ .+ ......+..|.+.|.+++|++ ++++|
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g-----~~l~~~~~dg~i~iw~~~~-----~~--~~~~~~~~~h~~~v~~~~~~~-~~~~l 101 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPG-----NFLIAGSWANDVRCWEVQD-----SG--QTIPKAQQMHTGPVLDVCWSD-DGSKV 101 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSS-----EEEEEEETTSEEEEEEECT-----TS--CEEEEEEEECSSCEEEEEECT-TSSEE
T ss_pred ccCCCCceEEEEEcCCCCCc-----eEEEEECCCCcEEEEEcCC-----CC--ceeEEEeccccCCEEEEEECc-CCCEE
Confidence 35699999999999983101 7999999999999999942 12 133477888999999999999 88999
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEe--cCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCC
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW--NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIK 217 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~--sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~ 217 (719)
++++.||.|++||+.+.+.... ..|...|.+++| ++++ .+|++++.||.|++||+++++.+..+. ..
T Consensus 102 ~s~~~dg~v~iwd~~~~~~~~~--------~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~ 170 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSNQAIQI--------AQHDAPVKTIHWIKAPNY-SCVMTGSWDKTLKFWDTRSSNPMMVLQ--LP 170 (368)
T ss_dssp EEEETTSEEEEEETTTTEEEEE--------EECSSCEEEEEEEECSSC-EEEEEEETTSEEEEECSSCSSCSEEEE--CS
T ss_pred EEEcCCCcEEEEEcCCCCceee--------ccccCceEEEEEEeCCCC-CEEEEccCCCcEEEEECCCCcEEEEEe--cC
Confidence 9999999999999998764432 247789999999 8886 689999999999999999999988887 44
Q ss_pred CceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEee-CCCCCeeEEEeCCCCCCe----EEEEeCCCcEEEE
Q 046451 218 RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFV-GHTKGVIAMSWCPNDSSY----LLTCAKDNRTICW 292 (719)
Q Consensus 218 ~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~-~h~~~V~~v~~sp~d~~~----l~sgs~Dg~I~iw 292 (719)
..+.++.+..+ .+++++.++ .+++||++........+. .+...+.++++.. +... +++++.||.|++|
T Consensus 171 ~~~~~~~~~~~---~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~i~i~ 243 (368)
T 3mmy_A 171 ERCYCADVIYP---MAVVATAER---GLIVYQLENQPSEFRRIESPLKHQHRCVAIFK-DKQNKPTGFALGSIEGRVAIH 243 (368)
T ss_dssp SCEEEEEEETT---EEEEEEGGG---CEEEEECSSSCEEEEECCCSCSSCEEEEEEEE-CTTSCEEEEEEEETTSEEEEE
T ss_pred CCceEEEecCC---eeEEEeCCC---cEEEEEeccccchhhhccccccCCCceEEEcc-cCCCCCCeEEEecCCCcEEEE
Confidence 56777777754 566777776 799999987544333332 2334556666655 4444 9999999999999
Q ss_pred ECCCC---eEEEEecCCCC------------CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccC
Q 046451 293 DTVSG---EIVSELPAGTN------------WNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRA 357 (719)
Q Consensus 293 d~~~~---~~~~~l~~h~~------------~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 357 (719)
|++.. +.+..+..|.. .|++++|++++ .+|++++.||.|+|||+.+++.+......
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------- 314 (368)
T 3mmy_A 244 YINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH-GTLATVGSDGRFSFWDKDARTKLKTSEQL-------- 314 (368)
T ss_dssp ESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTT-CCEEEEETTSCEEEEETTTTEEEEECCCC--------
T ss_pred ecCCCCccccceeeeeeecccccccccccccceEEEEEecCC-CEEEEEccCCeEEEEECCCCcEEEEecCC--------
Confidence 99887 56777777765 69999999999 79999999999999999998876533211
Q ss_pred cceecCCCceeeeeCCcEEEEccCCC
Q 046451 358 PKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 358 p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
......++|+.+|++++....++
T Consensus 315 ---~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 315 ---DQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp ---SSCEEEEEECTTSSCEEEEECCC
T ss_pred ---CCCceEEEECCCCCeEEEEeccc
Confidence 11124588999999777665443
No 109
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=4.6e-28 Score=266.61 Aligned_cols=275 Identities=17% Similarity=0.341 Sum_probs=220.3
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLA 140 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~la 140 (719)
.+|...|+++.| ++ ++|++|+.||.|++||+ .++ +.+..+.+|.+.|.+++| ++++|+
T Consensus 130 ~~~~~~v~~~~~--d~--------~~l~~g~~dg~i~iwd~------~~~---~~~~~~~~h~~~v~~l~~---~~~~l~ 187 (435)
T 1p22_A 130 SETSKGVYCLQY--DD--------QKIVSGLRDNTIKIWDK------NTL---ECKRILTGHTGSVLCLQY---DERVII 187 (435)
T ss_dssp CSSCCCEEEEEC--CS--------SEEEEEESSSCEEEEES------SSC---CEEEEECCCSSCEEEEEC---CSSEEE
T ss_pred cCCCCcEEEEEE--CC--------CEEEEEeCCCeEEEEeC------CCC---eEEEEEcCCCCcEEEEEE---CCCEEE
Confidence 456778999988 44 69999999999999998 555 778889999999999999 568999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCcee---EEecCCCC
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPV---ISFSESIK 217 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~---~~~~~~~~ 217 (719)
+|+.||.|++||+.+++....+ ..|...|.+++|++ .+|++++.||.|++||+++++.+ ..+. .|.
T Consensus 188 sg~~dg~i~vwd~~~~~~~~~~-------~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~-~~~ 256 (435)
T 1p22_A 188 TGSSDSTVRVWDVNTGEMLNTL-------IHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLV-GHR 256 (435)
T ss_dssp EEETTSCEEEEESSSCCEEEEE-------CCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEEC-CCS
T ss_pred EEcCCCeEEEEECCCCcEEEEE-------cCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEec-CCC
Confidence 9999999999999988765442 35778999999974 38999999999999999987765 3444 789
Q ss_pred CceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC
Q 046451 218 RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297 (719)
Q Consensus 218 ~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~ 297 (719)
..|.+++| ++ .++++++.|+ .|++||+++. +.+..+.+|...|.++.|+ +++|++|+.||.|++||++++
T Consensus 257 ~~v~~~~~--~~-~~l~s~~~dg---~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 257 AAVNVVDF--DD-KYIVSASGDR---TIKVWNTSTC-EFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp SCEEEEEE--ET-TEEEEEETTS---EEEEEETTTC-CEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTC
T ss_pred CcEEEEEe--CC-CEEEEEeCCC---eEEEEECCcC-cEEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCCC
Confidence 99999999 44 5799999998 9999999875 7788899999999999994 579999999999999999999
Q ss_pred eEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc---------cccCCCCCCCCCccCcceecCCCcee
Q 046451 298 EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR---------YGVGDSNFSAAPLRAPKWYKRPAGAS 368 (719)
Q Consensus 298 ~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~---------~~~~~~~~~~~~~~~p~w~~~~~~~s 368 (719)
+.+..+.+|...|.+++| ++ .+|++|+.||.|+|||+.++.. ...... ....+....| .....++
T Consensus 327 ~~~~~~~~h~~~v~~~~~--~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~-~~~~l~s 400 (435)
T 1p22_A 327 ACLRVLEGHEELVRCIRF--DN-KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE--HSGRVFRLQF-DEFQIVS 400 (435)
T ss_dssp CEEEEECCCSSCEEEEEC--CS-SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECC--CSSCCCCEEE-CSSCEEE
T ss_pred CEEEEEeCCcCcEEEEEe--cC-CEEEEEeCCCcEEEEECCCCCCccccccchheeeccC--CCCCeEEEEe-CCCEEEE
Confidence 999999999999999999 55 7999999999999999977652 111111 1112234444 2334456
Q ss_pred eeeCCcEEEEccCCCC
Q 046451 369 FGFGGKLVSFHPKSSA 384 (719)
Q Consensus 369 ~s~~Gklv~~~~~~~~ 384 (719)
.+.||.+..|+..+..
T Consensus 401 ~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 401 SSHDDTILIWDFLNDP 416 (435)
T ss_dssp CCSSSEEEEEC-----
T ss_pred EeCCCEEEEEECCCCC
Confidence 6667777777765543
No 110
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=5.2e-28 Score=258.87 Aligned_cols=277 Identities=12% Similarity=0.191 Sum_probs=206.6
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
|.+.|.+++|||||++||+|+.+| ++||+++...... .. +...+..++|..++. .
T Consensus 18 h~~~V~~v~fs~dg~~la~g~~~~-----------~~iw~~~~~~~~~----~~---~~~~~~~~~~~~~~~-------~ 72 (355)
T 3vu4_A 18 VSNPVTDYEFNQDQSCLILSTLKS-----------FEIYNVHPVAHIM----SQ---EMRHLSKVRMLHRTN-------Y 72 (355)
T ss_dssp -CCCCCEEEECTTSSEEEEECSSE-----------EEEEEETTEEEEE----EE---ECSCCCEEEECTTSS-------E
T ss_pred CCCceEEEEECCCCCEEEEEcCCE-----------EEEEecCCcceee----ee---ecCCeEEEEEcCCCC-------E
Confidence 568899999999999999997665 3789877432211 11 122477888887762 3
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCC-CCCCccCC
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAP-AEPSHFPP 164 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~-~~~~~~~~ 164 (719)
++++++.|+.|+|||+ .++ +.+..+. |...|.+++|++ +.++++ .|+.|+|||+.+. +.+..+
T Consensus 73 ~~~~~~~d~~v~iWd~------~~~---~~~~~~~-~~~~v~~v~~~~---~~~~~~-~~~~i~i~d~~~~~~~~~~~-- 136 (355)
T 3vu4_A 73 VAFVTGVKEVVHIWDD------VKK---QDVSRIK-VDAPVKDLFLSR---EFIVVS-YGDVISVFKFGNPWKRITDD-- 136 (355)
T ss_dssp EEEECSSTTEEEEEET------TTT---EEEEEEE-CSSCEEEEEECS---SEEEEE-ETTEEEEEESSTTCCBSSCC--
T ss_pred EEEEECCccEEEEEEC------CCC---cEEEEEE-CCCceEEEEEcC---CEEEEE-EcCEEEEEECCCCceeeEEe--
Confidence 4467888899999998 445 6666665 677999999976 345544 4789999999987 444332
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEE--EeCCCcEEEEECCCCc----------------eeEEecCCCCCceeEEEEC
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILAS--TSYNGTTVVWDLKKQK----------------PVISFSESIKRRCSVLQWN 226 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s--~s~dg~I~iwd~~~~~----------------~~~~~~~~~~~~i~~l~~s 226 (719)
.. ....+++++ .++++ |+.||.|++||+++++ .+..+. .|...|.+++|+
T Consensus 137 -~~-------~~~~~~~s~---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~-~h~~~v~~~~~s 204 (355)
T 3vu4_A 137 -IR-------FGGVCEFSN---GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK-AHTNPIKMVRLN 204 (355)
T ss_dssp -EE-------EEEEEEEET---TEEEEEESSCTTCEEEEECCC------------------CCEEEC-CCSSCEEEEEEC
T ss_pred -cc-------CCceEEEEc---cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE-ccCCceEEEEEC
Confidence 11 333455555 24554 6889999999999865 256666 899999999999
Q ss_pred CCCCcEEEEEeCCCCCCc-EEEEecCCCCCceEEee-C-CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE--EE
Q 046451 227 PDVATQLVVASDEDSSPA-LRLWDMRNTMSPVKEFV-G-HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI--VS 301 (719)
Q Consensus 227 p~g~~~l~~~s~d~~~~~-I~lwDl~~~~~~~~~~~-~-h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~--~~ 301 (719)
++| .+|++++.|+ + |+|||++++ +.+..+. + |...|.+++|+| ++++|++++.|++|+|||++.+.. ..
T Consensus 205 ~~g-~~l~s~s~d~---~~v~iwd~~~~-~~~~~~~~g~h~~~v~~~~~s~-~~~~l~s~s~d~~v~iw~~~~~~~~~~~ 278 (355)
T 3vu4_A 205 RKS-DMVATCSQDG---TIIRVFKTEDG-VLVREFRRGLDRADVVDMKWST-DGSKLAVVSDKWTLHVFEIFNDQDNKRH 278 (355)
T ss_dssp TTS-SEEEEEETTC---SEEEEEETTTC-CEEEEEECTTCCSCEEEEEECT-TSCEEEEEETTCEEEEEESSCCSCCCSE
T ss_pred CCC-CEEEEEeCCC---CEEEEEECCCC-cEEEEEEcCCCCCcEEEEEECC-CCCEEEEEECCCEEEEEEccCCCCcccc
Confidence 998 5899999998 8 999999875 6677787 5 999999999999 999999999999999999976431 11
Q ss_pred EecC---------------------CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 302 ELPA---------------------GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 302 ~l~~---------------------h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
.+.. +......++|++++ .+|++++.||.+++|++..+..
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~-~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 279 ALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISES-SLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp ETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSS-EEEEEETTTTEEEEEEEEEETT
T ss_pred cccceeeccccccccceeEEEeccCCCCCceEEEEeCCC-CEEEEEeCCCeEEEEEEEcCCC
Confidence 1111 11223678999999 7999999999999999876543
No 111
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3e-29 Score=295.41 Aligned_cols=255 Identities=19% Similarity=0.320 Sum_probs=211.4
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC-CCCEE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF-TPNLL 139 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~-~~~~l 139 (719)
.+|.+.|++++|++++ .+|++|+.||.|+|||+.. .+. ..+..+.+|.+.|.+++|+++ ++++|
T Consensus 6 ~gH~~~V~~l~~s~dg--------~~latg~~dg~I~vwd~~~----~~~---~~~~~l~~h~~~V~~l~~s~~~~~~~l 70 (753)
T 3jro_A 6 NAHNELIHDAVLDYYG--------KRLATCSSDKTIKIFEVEG----ETH---KLIDTLTGHEGPVWRVDWAHPKFGTIL 70 (753)
T ss_dssp --CCCCEEEECCCSSS--------CCEEEEETTTEEEEEEEET----TEE---EEEEEECCCSSCEEEEEECCTTSCSEE
T ss_pred ccCcceeEEEEECCCC--------CeEEEEECCCcEEEEecCC----CCC---ccceeccCCcCceEEEEecCCCCCCEE
Confidence 5689999999999998 7999999999999999842 133 667788999999999999882 28999
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCC--CCcEEEEEeCCCcEEEEECCCCc--eeEEecCC
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK--VQHILASTSYNGTTVVWDLKKQK--PVISFSES 215 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~--g~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~~ 215 (719)
++|+.||.|++||+.+++... ......|...|++++|+++ + .+|++++.||.|++||++++. ....+. .
T Consensus 71 ~s~s~Dg~I~vwd~~~~~~~~-----~~~~~~h~~~V~~v~~sp~~~~-~~l~sgs~dg~I~vwdl~~~~~~~~~~~~-~ 143 (753)
T 3jro_A 71 ASCSYDGKVLIWKEENGRWSQ-----IAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPIIID-A 143 (753)
T ss_dssp EEEETTSCEEEEEEETTEEEE-----EEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCSSSCCCCEEEE-C
T ss_pred EEEeCCCeEEEEECCCCcccc-----cccccCCCCCeEEEEECCCCCC-CEEEEEeCCCcEEEEEeecCCCcceeEee-c
Confidence 999999999999998864211 1112357889999999998 6 699999999999999999873 333444 6
Q ss_pred CCCceeEEEECCC------------CCcEEEEEeCCCCCCcEEEEecCCCC---CceEEeeCCCCCeeEEEeCCCC---C
Q 046451 216 IKRRCSVLQWNPD------------VATQLVVASDEDSSPALRLWDMRNTM---SPVKEFVGHTKGVIAMSWCPND---S 277 (719)
Q Consensus 216 ~~~~i~~l~~sp~------------g~~~l~~~s~d~~~~~I~lwDl~~~~---~~~~~~~~h~~~V~~v~~sp~d---~ 277 (719)
|...|.+++|++. ...++++++.|+ .|++||+++.. ..+..+.+|...|++++|+| + +
T Consensus 144 ~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg---~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp-~~~~~ 219 (753)
T 3jro_A 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN---LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLR 219 (753)
T ss_dssp CSSCEEEEEECCCC---------CGGGCCEEEEETTS---CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSS
T ss_pred CCCceEEEEecCcccccccccccCCCCCEEEEEECCC---eEEEEeccCCcccceeeeeecCCCCcEEEEEecc-CCCCC
Confidence 8899999999994 235799999998 89999998764 34567789999999999999 6 8
Q ss_pred CeEEEEeCCCcEEEEECCCCe-----EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 278 SYLLTCAKDNRTICWDTVSGE-----IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 278 ~~l~sgs~Dg~I~iwd~~~~~-----~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
.+|++++.||.|++||+.+++ .+.....|...|++++|++++ .+|++++.||.|+||++..+..
T Consensus 220 ~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg-~~l~s~s~Dg~I~vwd~~~~~~ 288 (753)
T 3jro_A 220 SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENLEGK 288 (753)
T ss_dssp EEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTT-CCEEEECSSSCEECCBCCSSSC
T ss_pred CEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCC-CEEEEEcCCCEEEEEecCCCCC
Confidence 999999999999999998864 333445688899999999999 7999999999999999986543
No 112
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.9e-29 Score=292.28 Aligned_cols=255 Identities=15% Similarity=0.239 Sum_probs=207.2
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCC--CCCCCCC
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKN--GSGSEDF 82 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~--g~~~~~~ 82 (719)
.|.+.|++++|++||++|++|+.||.| +|||+....... .....+|...|++++|+++ +
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~dg~I----------~vwd~~~~~~~~---~~~l~~h~~~V~~l~~s~~~~~------ 67 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSSDKTI----------KIFEVEGETHKL---IDTLTGHEGPVWRVDWAHPKFG------ 67 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEETTTEE----------EEEEEETTEEEE---EEEECCCSSCEEEEEECCTTSC------
T ss_pred cCcceeEEEEECCCCCeEEEEECCCcE----------EEEecCCCCCcc---ceeccCCcCceEEEEecCCCCC------
Confidence 567899999999999999999988877 889887332111 1233568999999999987 5
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC--CCEEEEEeCCCcEEEEcCCCCCCCC
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT--PNLLASGADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~--~~~lasgs~dg~I~iwdl~~~~~~~ 160 (719)
++|++|+.||.|++||+.+ + ....+..+..|...|.+++|++ + +++|++|+.||.|++||+.+.....
T Consensus 68 --~~l~s~s~Dg~I~vwd~~~------~-~~~~~~~~~~h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~ 137 (753)
T 3jro_A 68 --TILASCSYDGKVLIWKEEN------G-RWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTS 137 (753)
T ss_dssp --SEEEEEETTSCEEEEEEET------T-EEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCC
T ss_pred --CEEEEEeCCCeEEEEECCC------C-cccccccccCCCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcc
Confidence 7999999999999999843 2 0136777888999999999999 6 8999999999999999998875443
Q ss_pred ccCCccCCCCCCCCCeEEEEecCC------------CCcEEEEEeCCCcEEEEECCCC----ceeEEecCCCCCceeEEE
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSK------------VQHILASTSYNGTTVVWDLKKQ----KPVISFSESIKRRCSVLQ 224 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~------------g~~~l~s~s~dg~I~iwd~~~~----~~~~~~~~~~~~~i~~l~ 224 (719)
.. ....|...|.+++|++. ++.+|++|+.||.|++||++++ .....+. .|...|.+++
T Consensus 138 ~~-----~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~-~h~~~V~~l~ 211 (753)
T 3jro_A 138 PI-----IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVA 211 (753)
T ss_dssp CE-----EEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEE
T ss_pred ee-----EeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec-CCCCcEEEEE
Confidence 22 12357789999999994 2368999999999999999887 3445555 7899999999
Q ss_pred ECCCC--CcEEEEEeCCCCCCcEEEEecCCCCC----ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 225 WNPDV--ATQLVVASDEDSSPALRLWDMRNTMS----PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 225 ~sp~g--~~~l~~~s~d~~~~~I~lwDl~~~~~----~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
|++++ ..++++++.|+ .|++||+++... .+.....|...|++++|++ ++.+|++++.||.|+|||+..+.
T Consensus 212 ~sp~~~~~~~l~s~s~Dg---~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 212 WSPTVLLRSYLASVSQDR---TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp ECCCCSSSEEEEEEESSS---CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECT-TTCCEEEECSSSCEECCBCCSSS
T ss_pred eccCCCCCCEEEEEecCC---EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcC-CCCEEEEEcCCCEEEEEecCCCC
Confidence 99993 36899999998 899999987532 2333456889999999999 89999999999999999998643
No 113
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.6e-28 Score=259.73 Aligned_cols=234 Identities=12% Similarity=0.081 Sum_probs=184.0
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCcc--
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF-- 162 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~-- 162 (719)
.+|++|+.||.|++||+ .++ +.+..+. ...|.++.|++ + +++++.|++|++|+.........+
T Consensus 49 ~~l~sg~~Dg~v~iwd~------~~~---~~~~~~~--~~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~~~~ 113 (343)
T 3lrv_A 49 WVCMCRCEDGALHFTQL------KDS---KTITTIT--TPNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILDSKT 113 (343)
T ss_dssp EEEEEEEETTEEEEEEE------SSS---SCEEEEE--EECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEETTT
T ss_pred CEEEEECCCCcEEEEEC------CCC---cEEEEEe--cCCceeeeeCC-c---eEEecCCCeEEEEEccCceEEeecCC
Confidence 79999999999999999 445 5555555 56788899988 3 999999999999987642110000
Q ss_pred -CCccCCCCCCCCCeEEEEecC--CCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCC
Q 046451 163 -PPLRGNGSAAQGEISFVSWNS--KVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDE 239 (719)
Q Consensus 163 -~~l~~~~~~h~~~I~~l~~sp--~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d 239 (719)
..+......|.+.|.+++|++ ++ .+|++++.||+|++||+++++.+..+...+...+.+++|++++ .+|++|+.|
T Consensus 114 ~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg-~~lasg~~d 191 (343)
T 3lrv_A 114 NKVLREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDS-LLLALYSPD 191 (343)
T ss_dssp CCEEEEEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTS-CEEEEECTT
T ss_pred cceeEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCC-CEEEEEcCC
Confidence 002222234667899999999 86 6999999999999999999998776654567789999999998 588999988
Q ss_pred CCCCcEEEEecCCCCCceEEeeC-CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC---CCCCeE--Ee
Q 046451 240 DSSPALRLWDMRNTMSPVKEFVG-HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA---GTNWNF--DI 313 (719)
Q Consensus 240 ~~~~~I~lwDl~~~~~~~~~~~~-h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~---h~~~v~--~l 313 (719)
+ .|++||+++.......+.. |...|.+++|++ ++.+|++++ |+.|+|||+++++.+..+.. |...+. ++
T Consensus 192 g---~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~-~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (343)
T 3lrv_A 192 G---ILDVYNLSSPDQASSRFPVDEEAKIKEVKFAD-NGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTY 266 (343)
T ss_dssp S---CEEEEESSCTTSCCEECCCCTTSCEEEEEECT-TSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEE
T ss_pred C---EEEEEECCCCCCCccEEeccCCCCEEEEEEeC-CCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEE
Confidence 8 9999999987544377887 999999999999 899999999 55999999999877655543 333343 59
Q ss_pred EEcCCCCCEEEEEeC-CCcEEEEeCCCCc
Q 046451 314 HWYPKIPGVISASSF-DGKIGIYNIEGCS 341 (719)
Q Consensus 314 ~~spdg~~~las~s~-Dg~I~iwd~~~~~ 341 (719)
+|++++ .+|++++. |+.|+||++++..
T Consensus 267 ~~~~~g-~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 267 DIDDSG-KNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp EECTTS-SEEEEEETTTTEEEEEEECTTT
T ss_pred EECCCC-CEEEEecCCCCcEEEEEEcccc
Confidence 999999 78888888 9999999997654
No 114
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=5.5e-28 Score=259.73 Aligned_cols=254 Identities=13% Similarity=0.184 Sum_probs=194.5
Q ss_pred CccceEEEcCCCCeEEEeeccceeeccc-CCCceEEEEEeeccCCcccce----eecccCCCCCceeeeecCCCCCCCCC
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSF-SSSANLEIFKLDFQSEDRDLL----LVGESPSSERFNRLAWGKNGSGSEDF 82 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~-s~~~~i~iwd~~~~~~~~~~~----~~~~~~~~~~V~~l~~sp~g~~~~~~ 82 (719)
+.|.+++ ++++++++|..++...||. +.++.+++|+++......... ......+...+.+++|+|||
T Consensus 74 ~~v~s~~--~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg------ 145 (365)
T 4h5i_A 74 DSPTAID--ASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG------ 145 (365)
T ss_dssp CCCCEEE--EETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS------
T ss_pred CceEEEE--eCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC------
Confidence 4455554 5678899998888887764 568889999998654332211 12223445668899999998
Q ss_pred ccceEE--EEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCC
Q 046451 83 SLGLVA--GGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 83 ~~~~la--sgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~ 160 (719)
++|+ +++.|++|+|||+ .++ ..+..+. |.+.|.+|+|+| ++++|++++.|+ +++|+..++....
T Consensus 146 --~~la~as~~~d~~i~iwd~------~~~---~~~~~~~-~~~~V~~v~fsp-dg~~l~s~s~~~-~~~~~~~~~~~~~ 211 (365)
T 4h5i_A 146 --TVAAIASSKVPAIMRIIDP------SDL---TEKFEIE-TRGEVKDLHFST-DGKVVAYITGSS-LEVISTVTGSCIA 211 (365)
T ss_dssp --SCEEEEESCSSCEEEEEET------TTT---EEEEEEE-CSSCCCEEEECT-TSSEEEEECSSC-EEEEETTTCCEEE
T ss_pred --CEEEEEECCCCCEEEEeEC------CCC---cEEEEeC-CCCceEEEEEcc-CCceEEecccee-EEEEEeccCccee
Confidence 5655 4557899999999 444 5566664 788899999999 889999998655 5666665555432
Q ss_pred ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC----cEEEEECCCCcee----EEecCCCCCceeEEEECCCCCcE
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG----TTVVWDLKKQKPV----ISFSESIKRRCSVLQWNPDVATQ 232 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg----~I~iwd~~~~~~~----~~~~~~~~~~i~~l~~sp~g~~~ 232 (719)
. .....|...|.+++|++++ .++++++.|+ .+++||+...... ..+. .|...|++++|+|+| .+
T Consensus 212 ~-----~~~~~~~~~v~~v~fspdg-~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~V~~~~~Spdg-~~ 283 (365)
T 4h5i_A 212 R-----KTDFDKNWSLSKINFIADD-TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVT-NRFKGITSMDVDMKG-EL 283 (365)
T ss_dssp E-----ECCCCTTEEEEEEEEEETT-EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEE-SSCSCEEEEEECTTS-CE
T ss_pred e-----eecCCCCCCEEEEEEcCCC-CEEEEEecCCcceeEEeecccccceecceeeeeec-CCCCCeEeEEECCCC-Cc
Confidence 1 2234577789999999997 5888888776 6888998876532 3344 688899999999998 58
Q ss_pred EEEEeCCCCCCcEEEEecCCCCCceEE-eeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC
Q 046451 233 LVVASDEDSSPALRLWDMRNTMSPVKE-FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS 296 (719)
Q Consensus 233 l~~~s~d~~~~~I~lwDl~~~~~~~~~-~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~ 296 (719)
|++++.|+ +|+|||+++. +++.. +.+|...|++|+|+| |+++|++|+.|++|+|||+..
T Consensus 284 lasgs~D~---~V~iwd~~~~-~~~~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 284 AVLASNDN---SIALVKLKDL-SMSKIFKQAHSFAITEVTISP-DSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEETTS---CEEEEETTTT-EEEEEETTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEECCT
T ss_pred eEEEcCCC---EEEEEECCCC-cEEEEecCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEcCC
Confidence 99999998 9999999875 55665 478999999999999 999999999999999999864
No 115
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=3.6e-27 Score=246.56 Aligned_cols=249 Identities=21% Similarity=0.363 Sum_probs=202.5
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
|...|.+++|+++|++||+|+.||.| +|||+..++... ....|...+.++.+.. .
T Consensus 66 ~~~~V~~v~~~~~~~~l~sgs~Dg~v----------~iw~~~~~~~~~-----~~~~h~~~~~~~~~~~----------~ 120 (318)
T 4ggc_A 66 PGEYISSVAWIKEGNYLAVGTSSAEV----------QLWDVQQQKRLR-----NMTSHSARVGSLSWNS----------Y 120 (318)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSEE----------EEEETTTTEEEE-----EEECCSSCEEEEEEET----------T
T ss_pred CCCeEEEEEECCCCCEEEEEECCCcE----------EEeecCCceeEE-----EecCccceEEEeecCC----------C
Confidence 45679999999999999999988877 788887654322 2245777777766654 5
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|++++.++.+++|+... .. ..+..+.+|...+.++.|++ ++++|++++.||.|+|||+.+++.....
T Consensus 121 ~l~s~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~--- 188 (318)
T 4ggc_A 121 ILSSGSRSGHIHHHDVRV-----AE---HHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVP--- 188 (318)
T ss_dssp EEEEEETTSEEEEEETTS-----SS---CEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCBTTBSCC---
T ss_pred EEEEEecCCceEeeecCC-----Cc---eeEEEEcCccCceEEEEEcC-CCCEEEEEecCcceeEEECCCCcccccc---
Confidence 899999999999999842 22 56778889999999999999 7899999999999999999987654332
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEE--EEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEe-CCCCC
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILA--STSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVAS-DEDSS 242 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~--s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s-~d~~~ 242 (719)
......+.+.|.++.+++.+..++. +++.+++|++||.+......... +...+..+.|++++..++++++ .|+
T Consensus 189 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~sg~~d~-- 264 (318)
T 4ggc_A 189 LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--AHSQVCSILWSPHYKELISGHGFAQN-- 264 (318)
T ss_dssp SEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEEETTTTEEEEEECTTTC--
T ss_pred eeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc--ceeeeeeeeecccccceEEEEEcCCC--
Confidence 2223446778999999998776654 45678999999999988877766 7788999999999865554443 455
Q ss_pred CcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 243 PALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 243 ~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
.|+|||+++. +++.++.+|.+.|++++|+| ++++|++|+.||+|+|||+.+.+
T Consensus 265 -~i~iwd~~~~-~~~~~l~gH~~~V~~l~~sp-dg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 265 -QLVIWKYPTM-AKVAELKGHTSRVLSLTMSP-DGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp -CEEEEETTTC-CEEEEECCCSSCEEEEEECT-TSSCEEEEETTTEEEEECCSCCC
T ss_pred -EEEEEECCCC-cEEEEEcCCCCCEEEEEEcC-CCCEEEEEecCCeEEEEECCCCC
Confidence 8999999875 77899999999999999999 99999999999999999997643
No 116
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=2.3e-27 Score=253.86 Aligned_cols=236 Identities=12% Similarity=0.163 Sum_probs=183.4
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE-
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL- 139 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l- 139 (719)
..|...|++++|++|+ .+|++|+.+| ++|||++ .. ...... +...+..++|.. +.+++
T Consensus 16 ~~h~~~V~~v~fs~dg--------~~la~g~~~~-~~iw~~~------~~---~~~~~~--~~~~~~~~~~~~-~~~~~~ 74 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQ--------SCLILSTLKS-FEIYNVH------PV---AHIMSQ--EMRHLSKVRMLH-RTNYVA 74 (355)
T ss_dssp ---CCCCCEEEECTTS--------SEEEEECSSE-EEEEEET------TE---EEEEEE--ECSCCCEEEECT-TSSEEE
T ss_pred ccCCCceEEEEECCCC--------CEEEEEcCCE-EEEEecC------Cc---ceeeee--ecCCeEEEEEcC-CCCEEE
Confidence 5588999999999998 7899988775 7899983 22 222222 223577788887 55655
Q ss_pred EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC-ceeEEecCCCCC
Q 046451 140 ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ-KPVISFSESIKR 218 (719)
Q Consensus 140 asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~-~~~~~~~~~~~~ 218 (719)
++++.|++|+|||+.+++.+..+ . +...|.+++|+++. ++++ .|+.|++||+.++ +.+..+. .
T Consensus 75 ~~~~~d~~v~iWd~~~~~~~~~~---~-----~~~~v~~v~~~~~~---~~~~-~~~~i~i~d~~~~~~~~~~~~-~--- 138 (355)
T 3vu4_A 75 FVTGVKEVVHIWDDVKKQDVSRI---K-----VDAPVKDLFLSREF---IVVS-YGDVISVFKFGNPWKRITDDI-R--- 138 (355)
T ss_dssp EECSSTTEEEEEETTTTEEEEEE---E-----CSSCEEEEEECSSE---EEEE-ETTEEEEEESSTTCCBSSCCE-E---
T ss_pred EEECCccEEEEEECCCCcEEEEE---E-----CCCceEEEEEcCCE---EEEE-EcCEEEEEECCCCceeeEEec-c---
Confidence 67888899999999988765442 1 44589999998762 3333 4789999999988 7766665 2
Q ss_pred ceeEEEECCCCCcEEEE--EeCCCCCCcEEEEecCCCC--------------Cc-eEEeeCCCCCeeEEEeCCCCCCeEE
Q 046451 219 RCSVLQWNPDVATQLVV--ASDEDSSPALRLWDMRNTM--------------SP-VKEFVGHTKGVIAMSWCPNDSSYLL 281 (719)
Q Consensus 219 ~i~~l~~sp~g~~~l~~--~s~d~~~~~I~lwDl~~~~--------------~~-~~~~~~h~~~V~~v~~sp~d~~~l~ 281 (719)
....+++++ .++++ ++.++ .|++||+++.. .+ +..+.+|...|.+++|++ ++++|+
T Consensus 139 ~~~~~~~s~---~~la~~sg~~~g---~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~ 211 (355)
T 3vu4_A 139 FGGVCEFSN---GLLVYSNEFNLG---QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVA 211 (355)
T ss_dssp EEEEEEEET---TEEEEEESSCTT---CEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEE
T ss_pred CCceEEEEc---cEEEEeCCCcCc---EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEE
Confidence 444556666 24444 45665 89999998653 12 678899999999999999 999999
Q ss_pred EEeCCCc-EEEEECCCCeEEEEec-C-CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 282 TCAKDNR-TICWDTVSGEIVSELP-A-GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 282 sgs~Dg~-I~iwd~~~~~~~~~l~-~-h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
+|+.|++ |+|||+++++.+.++. + |...|++++|++++ .+|++++.|++|+|||++...
T Consensus 212 s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~-~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 212 TCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDG-SKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTS-CEEEEEETTCEEEEEESSCCS
T ss_pred EEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCC-CEEEEEECCCEEEEEEccCCC
Confidence 9999998 9999999999999998 5 99999999999999 799999999999999998764
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=4.2e-27 Score=254.39 Aligned_cols=274 Identities=11% Similarity=0.128 Sum_probs=215.0
Q ss_pred CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEE
Q 046451 20 PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIW 99 (719)
Q Consensus 20 ~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lw 99 (719)
.++++++.+|.| ++||++.++... ...+...+.+++|++++. .++++++.|+.|++|
T Consensus 3 ~l~vs~~~d~~v----------~v~d~~~~~~~~------~~~~~~~~~~~~~s~dg~-------~l~~~~~~d~~i~v~ 59 (391)
T 1l0q_A 3 FAYIANSESDNI----------SVIDVTSNKVTA------TIPVGSNPMGAVISPDGT-------KVYVANAHSNDVSII 59 (391)
T ss_dssp EEEEEETTTTEE----------EEEETTTTEEEE------EEECSSSEEEEEECTTSS-------EEEEEEGGGTEEEEE
T ss_pred EEEEEcCCCCEE----------EEEECCCCeEEE------EeecCCCcceEEECCCCC-------EEEEECCCCCeEEEE
Confidence 456777666655 889887543322 223345689999999983 345788899999999
Q ss_pred cCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE-EEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEE
Q 046451 100 NPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL-ASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF 178 (719)
Q Consensus 100 d~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l-asgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~ 178 (719)
|+ .++ +.+..+..+. .+.+++|++ ++++| ++++.|+.|++||+.+++....+ . +...+.+
T Consensus 60 d~------~~~---~~~~~~~~~~-~v~~~~~sp-dg~~l~~~~~~~~~v~v~d~~~~~~~~~~---~-----~~~~~~~ 120 (391)
T 1l0q_A 60 DT------ATN---NVIATVPAGS-SPQGVAVSP-DGKQVYVTNMASSTLSVIDTTSNTVAGTV---K-----TGKSPLG 120 (391)
T ss_dssp ET------TTT---EEEEEEECSS-SEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEE---E-----CSSSEEE
T ss_pred EC------CCC---eEEEEEECCC-CccceEECC-CCCEEEEEECCCCEEEEEECCCCeEEEEE---e-----CCCCcce
Confidence 98 445 6666666554 899999999 66766 55567799999999987654432 1 2346899
Q ss_pred EEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceE
Q 046451 179 VSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVK 258 (719)
Q Consensus 179 l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~ 258 (719)
++|++++..++++++.++.|++||+++++.+..+. ....+.+++|+++++.+++++..++ .|++||+++. +.+.
T Consensus 121 ~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~~~dg~~l~~~~~~~~---~v~~~d~~~~-~~~~ 194 (391)
T 1l0q_A 121 LALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS--VGRSPKGIAVTPDGTKVYVANFDSM---SISVIDTVTN-SVID 194 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CCSSEEEEEECTTSSEEEEEETTTT---EEEEEETTTT-EEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe--cCCCcceEEECCCCCEEEEEeCCCC---EEEEEECCCC-eEEE
Confidence 99999986555788889999999999999888887 4466799999999976667777776 8999999875 4444
Q ss_pred EeeCCCCCeeEEEeCCCCCCeEEEEe---CCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEE
Q 046451 259 EFVGHTKGVIAMSWCPNDSSYLLTCA---KDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIY 335 (719)
Q Consensus 259 ~~~~h~~~V~~v~~sp~d~~~l~sgs---~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iw 335 (719)
.+. +...+.+++|++ ++++|++++ .++.|++||+.+++.+..+..|.. +.+++|++++..++++++.|+.|++|
T Consensus 195 ~~~-~~~~~~~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v~v~ 271 (391)
T 1l0q_A 195 TVK-VEAAPSGIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTVSVI 271 (391)
T ss_dssp EEE-CSSEEEEEEECT-TSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEe-cCCCccceEECC-CCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEEEEE
Confidence 444 566889999999 888888887 689999999999999998887764 89999999995566888999999999
Q ss_pred eCCCCcccc
Q 046451 336 NIEGCSRYG 344 (719)
Q Consensus 336 d~~~~~~~~ 344 (719)
|+.+++...
T Consensus 272 d~~~~~~~~ 280 (391)
T 1l0q_A 272 DTATNTITA 280 (391)
T ss_dssp ETTTTEEEE
T ss_pred ECCCCcEEE
Confidence 999988755
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.8e-28 Score=266.55 Aligned_cols=294 Identities=13% Similarity=0.120 Sum_probs=215.4
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccC-----------------------CCCCCCCcee
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISS-----------------------GETGGNPLIA 117 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~-----------------------~~~~~~~~~~ 117 (719)
.+....|.+++|++|| ++||+++.|++|+ |......- .++ ....
T Consensus 12 ~~~~~~v~sv~~SpDG--------~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~---~~~~ 78 (588)
T 2j04_A 12 KEFEDWKNNLTWARDG--------TLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELA---QQNG 78 (588)
T ss_dssp CCCSSSSCCEEECTTS--------CEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCC---CSSC
T ss_pred hHhhccEEEEEECCCC--------CEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeC---CCce
Confidence 4456899999999999 7999999999996 32211100 001 1111
Q ss_pred eec-cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC
Q 046451 118 HLS-RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG 196 (719)
Q Consensus 118 ~l~-~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg 196 (719)
.+. .|...|.+++|+| ++.+||+++.||.|+|||... .... +.....-....|.+++|+|+| .+|++|+.||
T Consensus 79 ~~~~~~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~---l~~~~~~~~~sv~svafSPDG-~~LAsgs~DG 151 (588)
T 2j04_A 79 LLNSQPVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTN---LDSKGNLSSRTYHCFEWNPIE-SSIVVGNEDG 151 (588)
T ss_dssp SSTTSCSCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEE---CCCSSCSTTTCEEEEEECSSS-SCEEEEETTS
T ss_pred EeecCCCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeee---ccCCCccccccEEEEEEcCCC-CEEEEEcCCC
Confidence 222 4678899999999 899999999999999999544 1111 110000012369999999998 5999999999
Q ss_pred cEEEEECCCCce-------eEEec---CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC--ceEEe-eCC
Q 046451 197 TTVVWDLKKQKP-------VISFS---ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS--PVKEF-VGH 263 (719)
Q Consensus 197 ~I~iwd~~~~~~-------~~~~~---~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~--~~~~~-~~h 263 (719)
+|+|||+.+++. +.++. .+|...|.+++|+|+| +++++.|+ +|++||+..... ...++ .+|
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~---tVrlWd~~~~~~~~~~~tL~~~h 225 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNN---SVFSMTVSASSHQPVSRMIQNAS 225 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTC---CEEEECCCSSSSCCCEEEEECCC
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCC---eEEEEECCCCccccceeeecccc
Confidence 999999998753 45552 2677899999999997 77788887 899999976542 23556 478
Q ss_pred CCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEE--cCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 264 TKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHW--YPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 264 ~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~--spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
...|.+++|+ +.+|++++ +++|++||+.+++......+|...|.++.| ++|+ ..|+++++||+ ++|.++.
T Consensus 226 ~~~V~svaFs---g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~-~~La~a~edG~-klw~~d~-- 297 (588)
T 2j04_A 226 RRKITDLKIV---DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKES-TILLMSNKTSY-KVLLEDE-- 297 (588)
T ss_dssp SSCCCCEEEE---TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSC-EEEEECSSCEE-EEEESSS--
T ss_pred cCcEEEEEEE---CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCC-CEEEEEcCCCC-EEEeecc--
Confidence 8999999998 37888887 699999999988874444489999999999 9998 79999999999 9999882
Q ss_pred ccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCCCCccccccccccceeeccCCCCCC
Q 046451 342 RYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGMV 407 (719)
Q Consensus 342 ~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~ 407 (719)
+. .......+++ .|+++..|...+.. ...+++ ...|.||++||||.-
T Consensus 298 -~~---------------~spd~~l~a~-~d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~~ 344 (588)
T 2j04_A 298 -LH---------------VTADNIIAPY-LEKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGYS 344 (588)
T ss_dssp -EE---------------EECCCSSHHH-HHHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSSE
T ss_pred -EE---------------ECCCceEEEE-cCCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCCE
Confidence 10 1111111222 26666666654443 334444 788999999999966
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.6e-27 Score=251.91 Aligned_cols=277 Identities=9% Similarity=0.019 Sum_probs=204.6
Q ss_pred EEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCC
Q 046451 14 AFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVD 93 (719)
Q Consensus 14 afSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~d 93 (719)
.+..|+++|++|+.||.| ++||+..+.....+. ...|.++.|++ . +++++.|
T Consensus 43 ~~~~d~~~l~sg~~Dg~v----------~iwd~~~~~~~~~~~-------~~~v~~~~~~~----------~-~~s~s~D 94 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGAL----------HFTQLKDSKTITTIT-------TPNPRTGGEHP----------A-IISRGPC 94 (343)
T ss_dssp SSSEEEEEEEEEEETTEE----------EEEEESSSSCEEEEE-------EECCCTTCCCC----------S-EEEECST
T ss_pred hhcCCCCEEEEECCCCcE----------EEEECCCCcEEEEEe-------cCCceeeeeCC----------c-eEEecCC
Confidence 345688899999988877 889998665443332 35677888876 3 9999999
Q ss_pred CcEEEEcCCcccc---CCCCCCCCceeeec-cccCCEEEEEEeC-CCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCC
Q 046451 94 GSIDIWNPLSLIS---SGETGGNPLIAHLS-RHKGPVRGLEFNS-FTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGN 168 (719)
Q Consensus 94 g~I~lwd~~~~~~---~~~~~~~~~~~~l~-~h~~~V~~l~fsp-~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~ 168 (719)
+.|++|+...... ..++ ..+..+. .|.+.|.+++|++ .++++|++++.||.|++||+++++.... .
T Consensus 95 ~~i~~w~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~---~--- 165 (343)
T 3lrv_A 95 NRLLLLYPGNQITILDSKTN---KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIV---H--- 165 (343)
T ss_dssp TEEEEEETTTEEEEEETTTC---CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEE---E---
T ss_pred CeEEEEEccCceEEeecCCc---ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEE---E---
Confidence 9999998753210 0122 3333333 6778999999998 2468999999999999999998775322 1
Q ss_pred CCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCcee-EEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEE
Q 046451 169 GSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPV-ISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRL 247 (719)
Q Consensus 169 ~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~-~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~l 247 (719)
...+...|.+++|++++ .+|++|+.||.|++||+++++.+ ..+...|...|.+++|++++ .+|++++ ++ .|++
T Consensus 166 ~~~~~~~i~~~~~~pdg-~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g-~~l~s~~-~~---~v~i 239 (343)
T 3lrv_A 166 SAKSDVEYSSGVLHKDS-LLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNG-YWMVVEC-DQ---TVVC 239 (343)
T ss_dssp CCCSSCCCCEEEECTTS-CEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTS-SEEEEEE-SS---BEEE
T ss_pred ecCCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCC-CEEEEEe-CC---eEEE
Confidence 12345579999999997 69999999999999999999887 77773389999999999998 5777877 44 7999
Q ss_pred EecCCCCCceEEee---CCCCCee--EEEeCCCCCCeEEEEeC-CCcEEEEECCCCeEEEEecCCCCCeEEeEEcC---C
Q 046451 248 WDMRNTMSPVKEFV---GHTKGVI--AMSWCPNDSSYLLTCAK-DNRTICWDTVSGEIVSELPAGTNWNFDIHWYP---K 318 (719)
Q Consensus 248 wDl~~~~~~~~~~~---~h~~~V~--~v~~sp~d~~~l~sgs~-Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~sp---d 318 (719)
||+++.. .+..+. .|...+. +++|++ ++++|++++. |+.|+||++.+....... ..+..+.|++ +
T Consensus 240 wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~ 313 (343)
T 3lrv_A 240 FDLRKDV-GTLAYPTYTIPEFKTGTVTYDIDD-SGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTAD 313 (343)
T ss_dssp EETTSST-TCBSSCCCBC-----CCEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CC
T ss_pred EEcCCCC-cceeecccccccccccceEEEECC-CCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccc
Confidence 9998763 333332 3444444 699999 9999999998 999999999765443333 4477888888 7
Q ss_pred CCCEEEEEeCCCcEEEEeCCCC
Q 046451 319 IPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 319 g~~~las~s~Dg~I~iwd~~~~ 340 (719)
. ..|++++.||.+.++-....
T Consensus 314 ~-~~l~~~~~d~~~~~~~~~~~ 334 (343)
T 3lrv_A 314 F-TDMDVVCGDGGIAAILKTND 334 (343)
T ss_dssp C-CEEEEEEETTEEEEEEECSS
T ss_pred c-ceeEEEecCCceEEEEecCC
Confidence 6 68888888999998865543
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=1e-27 Score=260.28 Aligned_cols=269 Identities=14% Similarity=0.095 Sum_probs=183.2
Q ss_pred eEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecC--------CCCCCCCCc
Q 046451 12 SVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGK--------NGSGSEDFS 83 (719)
Q Consensus 12 ~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp--------~g~~~~~~~ 83 (719)
...+++++.+||+|+.|++| +|||++.+.......+....+|.+.|++|+|+| ++
T Consensus 94 ~~~~~~~~~~las~~~d~~v----------~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~------- 156 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDNTV----------RLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAE------- 156 (393)
T ss_dssp ---CCEEEEEEEEEETTSCE----------EEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEE-------
T ss_pred eeecCCCCCEEEEEeCCCcE----------EEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCC-------
Confidence 34455566789999877766 889988765443333344568999999999997 44
Q ss_pred cceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
++||+|+.|++|+|||+ .++ ..+..+..|...|.+++|+|++.++|++++.||+|++||+.+++......
T Consensus 157 -~~las~s~D~tv~~Wd~------~~~---~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~ 226 (393)
T 4gq1_A 157 -QVIASVGDDCTLIIWRL------TDE---GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENS 226 (393)
T ss_dssp -EEEEEEETTSEEEEEEE------ETT---EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC------
T ss_pred -CEEEEEECCCeEEEEEC------CCC---ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCccccccc
Confidence 79999999999999998 444 66777788999999999999555789999999999999998876433221
Q ss_pred C------------------ccCCCCCCCCCeEEEEec-CCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEE
Q 046451 164 P------------------LRGNGSAAQGEISFVSWN-SKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQ 224 (719)
Q Consensus 164 ~------------------l~~~~~~h~~~I~~l~~s-p~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~ 224 (719)
. ......+|...+.++.|+ +++ ..|++++.|+++++||+..++....+. .+...+..+.
T Consensus 227 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg-~~l~s~s~d~~i~vwd~~~~~~~~~l~-~~~~~~~~~~ 304 (393)
T 4gq1_A 227 QTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDG-SGILAMCKSGAWLRWNLFANNDYNEIS-DSTMKLGPKN 304 (393)
T ss_dssp ----CSCCCSEEEESGGGC------CCSSSCSEEEEETTTT-CEEEEECTTSEEEEEEC--------------------C
T ss_pred ccCCcccceEEecccccceeeeecccccccceeeeeecCCC-CEEEEEeCCCCEEEEECccCCCCceEe-eecCccccEE
Confidence 0 011224577789999997 555 699999999999999999887666655 4444455444
Q ss_pred ECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec
Q 046451 225 WNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP 304 (719)
Q Consensus 225 ~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~ 304 (719)
+.+++ +....+...+..+.+.+.++.++++|+.||.|+|||+.+++.+..+.
T Consensus 305 ~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~ 356 (393)
T 4gq1_A 305 LLPNV----------------------------QGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPI 356 (393)
T ss_dssp CSCSE----------------------------EEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEE
T ss_pred Ecccc----------------------------ccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEec
Confidence 44442 11222222333333444345567788899999999999999888888
Q ss_pred CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 305 AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 305 ~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
.|...|.+++|+||| ++||++++|| +.+|++..
T Consensus 357 ~~~~~V~svafspdG-~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 357 QLGMPIVDFCWHQDG-SHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp ECSSCEEEEEECTTS-SEEEEEESSE-EEEEEEGG
T ss_pred CCCCcEEEEEEcCCC-CEEEEEeCCC-eEEEEEeC
Confidence 899999999999999 7999998655 66666543
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=2.3e-26 Score=252.17 Aligned_cols=326 Identities=11% Similarity=0.079 Sum_probs=235.3
Q ss_pred CccceEE---EcCCCCeEEEeeccce----eecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCC
Q 046451 8 NRSASVA---FAPDAPYMAAGTMAGA----VDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSE 80 (719)
Q Consensus 8 ~~V~~va---fSpdg~~Latgs~dG~----v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~ 80 (719)
..+..++ |+++++.+++.+..+. +.+.-..++.+.||.++.... .+...........+.+++|++++
T Consensus 61 ~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~--~~~~~~~~~~~~~~~~~~~s~~~---- 134 (433)
T 3bws_A 61 IALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGI--THRFISRFKTGFQPKSVRFIDNT---- 134 (433)
T ss_dssp EEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTC--SEEEEEEEECSSCBCCCEESSSS----
T ss_pred CccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCC--cceEEEEEcCCCCceEEEEeCCC----
Confidence 4567788 9999887766543332 111223344456676654221 11223333445667899999965
Q ss_pred CCccceEEEEcCCCcEEEEcCCccccCCCCCCCCcee-----eeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCC
Q 046451 81 DFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIA-----HLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA 155 (719)
Q Consensus 81 ~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~-----~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~ 155 (719)
.++++++.++.|++||+. ++ +... .+.+|.+.|.+++|++ +++++++++.|+.|++||+.+
T Consensus 135 ----~~~~~~~~~~~i~~~d~~------~g---~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 135 ----RLAIPLLEDEGMDVLDIN------SG---QTVRLSPPEKYKKKLGFVETISIPE-HNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp ----EEEEEBTTSSSEEEEETT------TC---CEEEECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEEEETTT
T ss_pred ----eEEEEeCCCCeEEEEECC------CC---eEeeecCcccccccCCceeEEEEcC-CCEEEEEECCCCEEEEEECCC
Confidence 688888889999999983 34 4444 4557889999999988 789999999999999999988
Q ss_pred CCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEE
Q 046451 156 PAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVV 235 (719)
Q Consensus 156 ~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~ 235 (719)
.+....+ . .|...+.+++|++++..++++++.|+.|++||+++++.+..+. ....+.+++|+++++. +++
T Consensus 201 ~~~~~~~---~----~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~-l~~ 270 (433)
T 3bws_A 201 LAYKATV---D----LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD--KIGLPRGLLLSKDGKE-LYI 270 (433)
T ss_dssp CCEEEEE---E----CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC--CCSEEEEEEECTTSSE-EEE
T ss_pred ceEEEEE---c----CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec--CCCCceEEEEcCCCCE-EEE
Confidence 7655442 2 3566899999999986555666689999999999998888877 4566999999999864 555
Q ss_pred EeC-CC----CCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCC-eEEEEeCCCcEEEEECCCCeEEEEecCCCCC
Q 046451 236 ASD-ED----SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS-YLLTCAKDNRTICWDTVSGEIVSELPAGTNW 309 (719)
Q Consensus 236 ~s~-d~----~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~-~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~ 309 (719)
++. ++ .++.|++||+++. +.+.. ..|...+.+++|++ +++ ++++++.|+.|++||+.+++.+..+. +...
T Consensus 271 ~~~~~~~~~~~dg~i~~~d~~~~-~~~~~-~~~~~~~~~~~~~~-~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~ 346 (433)
T 3bws_A 271 AQFSASNQESGGGRLGIYSMDKE-KLIDT-IGPPGNKRHIVSGN-TENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDK 346 (433)
T ss_dssp EEEESCTTCSCCEEEEEEETTTT-EEEEE-EEEEECEEEEEECS-STTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSS
T ss_pred EECCCCccccCCCeEEEEECCCC-cEEee-ccCCCCcceEEECC-CCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCC
Confidence 542 11 1238999999865 33333 34566889999999 665 55677899999999999999888876 5567
Q ss_pred eEEeEEcCCCCCEEEEEeC---------------CCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCc
Q 046451 310 NFDIHWYPKIPGVISASSF---------------DGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGK 374 (719)
Q Consensus 310 v~~l~~spdg~~~las~s~---------------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gk 374 (719)
+.+++|++++ .+|++++. ||.|++||+.+++........ ..+..++|++||+
T Consensus 347 ~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~------------~~~~~~~~s~dg~ 413 (433)
T 3bws_A 347 PNTIALSPDG-KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG------------NQPTGLDVSPDNR 413 (433)
T ss_dssp EEEEEECTTS-SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS------------SSEEEEEECTTSC
T ss_pred CCeEEEcCCC-CEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC------------CCCceEEEcCCCC
Confidence 9999999999 56666655 579999999998876532211 1124567778887
Q ss_pred EEEEcc
Q 046451 375 LVSFHP 380 (719)
Q Consensus 375 lv~~~~ 380 (719)
++++..
T Consensus 414 ~l~~~~ 419 (433)
T 3bws_A 414 YLVISD 419 (433)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 766554
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.1e-26 Score=256.79 Aligned_cols=201 Identities=12% Similarity=0.099 Sum_probs=168.1
Q ss_pred cccCCEEEEEEeCCCCCEE-EEEeCCCcEEEEcCC--CCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCc
Q 046451 121 RHKGPVRGLEFNSFTPNLL-ASGADDGEICIWDLS--APAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGT 197 (719)
Q Consensus 121 ~h~~~V~~l~fsp~~~~~l-asgs~dg~I~iwdl~--~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~ 197 (719)
.|.+.|.+++|++ ++++| ++++.||.|+|||+. +++....+ .. ..+...|++++|++++ .+|++++.+|.
T Consensus 100 ~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~---~~--~~~~~~v~~~~~sp~~-~~l~~~~~~g~ 172 (450)
T 2vdu_B 100 PIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLR---KR--FCFSKRPNAISIAEDD-TTVIIADKFGD 172 (450)
T ss_dssp CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEE---EE--EECSSCEEEEEECTTS-SEEEEEETTSE
T ss_pred ccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeee---ec--ccCCCCceEEEEcCCC-CEEEEEeCCCc
Confidence 3555799999999 77775 899999999999998 66554442 21 1355689999999997 69999999999
Q ss_pred EEEEECCCCceeE----EecCCCCCceeEEEECCC---CCcEEEEEeCCCCCCcEEEEecCCCCCceEE-eeCCCCCeeE
Q 046451 198 TVVWDLKKQKPVI----SFSESIKRRCSVLQWNPD---VATQLVVASDEDSSPALRLWDMRNTMSPVKE-FVGHTKGVIA 269 (719)
Q Consensus 198 I~iwd~~~~~~~~----~~~~~~~~~i~~l~~sp~---g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~-~~~h~~~V~~ 269 (719)
|++||+.+++... .+. .|...|.+++|+++ + .+|++++.|+ .|++||+++. ..+.. +.+|...|.+
T Consensus 173 v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~-~~l~s~~~d~---~i~vwd~~~~-~~~~~~~~~h~~~v~~ 246 (450)
T 2vdu_B 173 VYSIDINSIPEEKFTQEPIL-GHVSMLTDVHLIKDSDGH-QFIITSDRDE---HIKISHYPQC-FIVDKWLFGHKHFVSS 246 (450)
T ss_dssp EEEEETTSCCCSSCCCCCSE-ECSSCEEEEEEEECTTSC-EEEEEEETTS---CEEEEEESCT-TCEEEECCCCSSCEEE
T ss_pred EEEEecCCcccccccceeee-cccCceEEEEEcCCCCCC-cEEEEEcCCC---cEEEEECCCC-ceeeeeecCCCCceEE
Confidence 9999998876543 454 68899999999999 6 6889999988 8999999876 44555 6689999999
Q ss_pred EEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC-------------------------CCCCeEEeEEcCCCCCEEE
Q 046451 270 MSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA-------------------------GTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 270 v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~-------------------------h~~~v~~l~~spdg~~~la 324 (719)
++|+ ++++|++++.|+.|+|||+.+++.+..+.. ....|.+++|++++ .+|+
T Consensus 247 ~~~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~ 323 (450)
T 2vdu_B 247 ICCG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL-PFVA 323 (450)
T ss_dssp EEEC--STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS-SEEE
T ss_pred EEEC--CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC-CEEE
Confidence 9999 789999999999999999999998888763 23468999999999 6777
Q ss_pred EEe-CCCcEEEEeC
Q 046451 325 ASS-FDGKIGIYNI 337 (719)
Q Consensus 325 s~s-~Dg~I~iwd~ 337 (719)
+++ .|+.|+||++
T Consensus 324 ~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 324 FFVEATKCIIILEM 337 (450)
T ss_dssp EEETTCSEEEEEEE
T ss_pred EEECCCCeEEEEEe
Confidence 777 8999999999
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=2.5e-27 Score=257.28 Aligned_cols=252 Identities=15% Similarity=0.153 Sum_probs=170.7
Q ss_pred ccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecC--------CCCcEEEEEe
Q 046451 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNS--------KVQHILASTS 193 (719)
Q Consensus 122 h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp--------~g~~~l~s~s 193 (719)
|...+....+.+ ++++|++++.|++|+|||+.++...... ......+|.+.|++++|+| ++ ++|++++
T Consensus 88 ~~~~~~~~~~~~-~~~~las~~~d~~v~lw~~~~~~~~~~~--~~~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~s 163 (393)
T 4gq1_A 88 HDGDGNVNSSPV-YSLFLACVCQDNTVRLIITKNETIITQH--VLGGKSGHHNFVNDIDIADVYSADNRLAE-QVIASVG 163 (393)
T ss_dssp ---------CCE-EEEEEEEEETTSCEEEEEEETTEEEEEE--EECTTTSCSSCEEEEEEEEEECTTCSEEE-EEEEEEE
T ss_pred cCCCcceeecCC-CCCEEEEEeCCCcEEEEECCCCccceee--eecccCCCCCceEEEEEccccccccCCCC-CEEEEEE
Confidence 444444444444 7789999999999999999877543221 2234567999999999987 54 6999999
Q ss_pred CCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCce----------------
Q 046451 194 YNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPV---------------- 257 (719)
Q Consensus 194 ~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~---------------- 257 (719)
.|++|+|||++++..+..+. .|...+.+++|+|++..+|++++.|+ +|++||+++.....
T Consensus 164 ~D~tv~~Wd~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~~~~~d~---~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~ 239 (393)
T 4gq1_A 164 DDCTLIIWRLTDEGPILAGY-PLSSPGISVQFRPSNPNQLIVGERNG---NIRIFDWTLNLSAEENSQTELVKNPWLLTL 239 (393)
T ss_dssp TTSEEEEEEEETTEEEEEEE-ECSSCEEEEEEETTEEEEEEEEETTS---EEEEEETTCCC----------CSCCCSEEE
T ss_pred CCCeEEEEECCCCceeeeec-CCCCCcEEEEECCCCCceEEecCCCC---EEEEEECCCCcccccccccCCcccceEEec
Confidence 99999999999888777766 68889999999999877899999998 99999998653211
Q ss_pred --------EEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeE---------------
Q 046451 258 --------KEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIH--------------- 314 (719)
Q Consensus 258 --------~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~--------------- 314 (719)
....+|...|.++.|+..+++.|++++.|+++++||+..++....+..|...+..+.
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (393)
T 4gq1_A 240 NTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLL 319 (393)
T ss_dssp ESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSS
T ss_pred ccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcce
Confidence 112467788999999744899999999999999999998877766666554444433
Q ss_pred ---EcC-CCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCCCCccccc
Q 046451 315 ---WYP-KIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSSAGHTSEN 390 (719)
Q Consensus 315 ---~sp-dg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~~~~~~~~ 390 (719)
|++ .+..++++|+.||+|+|||+.+++........ ......++|++||++++...+++..+..+.
T Consensus 320 ~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~-----------~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 320 GACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQL-----------GMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp CCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEEC-----------SSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred eEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCC-----------CCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 333 23246788889999999999988765421100 011245899999999999887765555554
Q ss_pred cc
Q 046451 391 SQ 392 (719)
Q Consensus 391 ~~ 392 (719)
|.
T Consensus 389 gf 390 (393)
T 4gq1_A 389 GF 390 (393)
T ss_dssp GG
T ss_pred Cc
Confidence 43
No 124
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=2.8e-26 Score=241.74 Aligned_cols=218 Identities=22% Similarity=0.377 Sum_probs=179.1
Q ss_pred eeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCC-CCcEEEEEeCC
Q 046451 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK-VQHILASTSYN 195 (719)
Q Consensus 117 ~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~-g~~~l~s~s~d 195 (719)
..+.+|.+.|++++|++ ++++|++++.||.|+|||+.+...... +......|...|.+++|++. +..+|++++.|
T Consensus 5 ~~~~gH~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWE---LSDSWRAHDSSIVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp CEECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEE---EEEEEECCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred ccCcccccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcce---ecceeccCCCcEEEEEEcCCCCCCEEEEEcCC
Confidence 45678999999999999 889999999999999999987654322 11222357889999999984 13699999999
Q ss_pred CcEEEEECCCC---------ceeEEecCCCCCceeEEEECCC--CCcEEEEEeCCCCCCcEEEEecCCCCCceEEe----
Q 046451 196 GTTVVWDLKKQ---------KPVISFSESIKRRCSVLQWNPD--VATQLVVASDEDSSPALRLWDMRNTMSPVKEF---- 260 (719)
Q Consensus 196 g~I~iwd~~~~---------~~~~~~~~~~~~~i~~l~~sp~--g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~---- 260 (719)
|.|++||++++ +.+..+. .|...|.+++|+++ + .+|++++.|+ .|++||+++... +..+
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~-~~l~~~~~dg---~v~iwd~~~~~~-~~~~~~~~ 154 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLN-DSKGSLYSVKFAPAHLG-LKLACLGNDG---ILRLYDALEPSD-LRSWTLTS 154 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEEC-CCSSCEEEEEECCGGGC-SEEEEEETTC---EEEEEECSSTTC-TTCCEEEE
T ss_pred CeEEEEecCCCcccccccCcceeeeec-ccCCceeEEEEcCCCCC-cEEEEecCCC---cEEEecCCChHH-hccccccc
Confidence 99999999987 4466666 78999999999999 6 5789999988 999999987532 2222
Q ss_pred ---------eCCCCCeeEEEeCCC--CCCeEEEEeCCCcEEEEECCCCeE--EEEecCCCCCeEEeEEcCCCC---CEEE
Q 046451 261 ---------VGHTKGVIAMSWCPN--DSSYLLTCAKDNRTICWDTVSGEI--VSELPAGTNWNFDIHWYPKIP---GVIS 324 (719)
Q Consensus 261 ---------~~h~~~V~~v~~sp~--d~~~l~sgs~Dg~I~iwd~~~~~~--~~~l~~h~~~v~~l~~spdg~---~~la 324 (719)
..|...+.+++|+|+ ++.+|++++.|+.+.+|+...++. +..+.+|...|++++|++++. .+|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~ 234 (351)
T 3f3f_A 155 EMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIA 234 (351)
T ss_dssp EEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEE
T ss_pred cccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEE
Confidence 267889999999993 389999999999999998887765 777889999999999999973 5999
Q ss_pred EEeCCCcEEEEeCCCCcccc
Q 046451 325 ASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 325 s~s~Dg~I~iwd~~~~~~~~ 344 (719)
+++.||.|+|||+.++....
T Consensus 235 s~~~dg~i~iwd~~~~~~~~ 254 (351)
T 3f3f_A 235 TGCKDGRIRIFKITEKLSPL 254 (351)
T ss_dssp EEETTSCEEEEEEEECC---
T ss_pred EEcCCCeEEEEeCCCCcCcc
Confidence 99999999999999865433
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=3.5e-25 Score=239.20 Aligned_cols=289 Identities=12% Similarity=0.108 Sum_probs=213.0
Q ss_pred ccccCccceEEEcCCCCeE-EEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCC
Q 046451 4 IKGINRSASVAFAPDAPYM-AAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDF 82 (719)
Q Consensus 4 l~~~~~V~~vafSpdg~~L-atgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~ 82 (719)
+.+...+.+++|+|||++| ++++.++.| ++||+..++... ...+...+.+++|++++.
T Consensus 28 ~~~~~~~~~~~~s~dg~~l~~~~~~d~~i----------~v~d~~~~~~~~------~~~~~~~v~~~~~spdg~----- 86 (391)
T 1l0q_A 28 IPVGSNPMGAVISPDGTKVYVANAHSNDV----------SIIDTATNNVIA------TVPAGSSPQGVAVSPDGK----- 86 (391)
T ss_dssp EECSSSEEEEEECTTSSEEEEEEGGGTEE----------EEEETTTTEEEE------EEECSSSEEEEEECTTSS-----
T ss_pred eecCCCcceEEECCCCCEEEEECCCCCeE----------EEEECCCCeEEE------EEECCCCccceEECCCCC-----
Confidence 3455678999999999987 566566655 888887543322 223344899999999983
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEE-EEEeCCCcEEEEcCCCCCCCCc
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLL-ASGADDGEICIWDLSAPAEPSH 161 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~l-asgs~dg~I~iwdl~~~~~~~~ 161 (719)
.++++++.++.|++||+ .++ +.+..+.. ...+.+++|++ ++++| ++++.|+.|++||+.+++....
T Consensus 87 --~l~~~~~~~~~v~v~d~------~~~---~~~~~~~~-~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 87 --QVYVTNMASSTLSVIDT------TSN---TVAGTVKT-GKSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp --EEEEEETTTTEEEEEET------TTT---EEEEEEEC-SSSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred --EEEEEECCCCEEEEEEC------CCC---eEEEEEeC-CCCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 34466777899999999 444 55555554 45789999999 66765 7888899999999988765443
Q ss_pred cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEe--CC
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVAS--DE 239 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s--~d 239 (719)
+ . ....+.+++|++++..++++++.++.|++||+++++.+..+. +...+.+++|+++++.+++++. .+
T Consensus 154 ~---~-----~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~ 223 (391)
T 1l0q_A 154 V---S-----VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK--VEAAPSGIAVNPEGTKAYVTNVDKYF 223 (391)
T ss_dssp E---E-----CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CSSEEEEEEECTTSSEEEEEEECSSC
T ss_pred E---e-----cCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe--cCCCccceEECCCCCEEEEEecCcCC
Confidence 2 2 123679999999986555788889999999999998888776 5678999999999964444443 45
Q ss_pred CCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeE-EEEeCCCcEEEEECCCCeEEEEecCCCCCeE---EeEE
Q 046451 240 DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYL-LTCAKDNRTICWDTVSGEIVSELPAGTNWNF---DIHW 315 (719)
Q Consensus 240 ~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l-~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~---~l~~ 315 (719)
+ .|++||+++. +.+..+..|. .+.+++|++ ++++| ++++.|+.|++||+.+++.+..+..|..... .+.+
T Consensus 224 ~---~v~~~d~~~~-~~~~~~~~~~-~~~~~~~s~-dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (391)
T 1l0q_A 224 N---TVSMIDTGTN-KITARIPVGP-DPAGIAVTP-DGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGS 297 (391)
T ss_dssp C---EEEEEETTTT-EEEEEEECCS-SEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEE
T ss_pred C---cEEEEECCCC-eEEEEEecCC-CccEEEEcc-CCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeec
Confidence 4 8999999875 5566676654 588999999 77766 6778899999999999999988876654211 1222
Q ss_pred cCCC---------------------CCEEEEEeCCCcEEEEeCCCCcc
Q 046451 316 YPKI---------------------PGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 316 spdg---------------------~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
.+++ ...+...+.|..+++|++.++..
T Consensus 298 ~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~ 345 (391)
T 1l0q_A 298 IPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSS 345 (391)
T ss_dssp CSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCE
T ss_pred ccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCcc
Confidence 2211 02355666788999999987764
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=1.6e-24 Score=223.94 Aligned_cols=266 Identities=14% Similarity=0.098 Sum_probs=177.7
Q ss_pred CceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCc---EEEEcCCccccCCCCCCCC
Q 046451 38 SANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGS---IDIWNPLSLISSGETGGNP 114 (719)
Q Consensus 38 ~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~---I~lwd~~~~~~~~~~~~~~ 114 (719)
+..+++|+...... -..+.....|+..|..|.|.+|.. ++++++-.+=. |+..-+. .++....
T Consensus 62 ~~~v~lw~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~~~~~~v~sla~s-----pd~~~~~ 127 (356)
T 2w18_A 62 EDVVSLWKALDAWQ--WEKLYTWHFAEVPVLQIVPVPDVY-------NLVCVALGNLEIREIRALFCS-----SDDESEK 127 (356)
T ss_dssp SSEEEEEEESSSSB--EEEEEEEECCSSCEEEECCCTTCC-------SCEEEEECSSSEEEEEEECC-----------CC
T ss_pred cceEEEcccCCCcc--ceeeEEEeccCceeEEEEEcCccc-------ceeeeeeccccccceEEEEEC-----CCccccc
Confidence 34568999886411 011233355778899999999864 56666543322 2222221 1110111
Q ss_pred ceeeeccccCCEEEEEEeCCCCCEEEEEe--CCCcEEEEcCCC-CCCCCccCCccCCCCCCCCCeEEEEecC---CCCcE
Q 046451 115 LIAHLSRHKGPVRGLEFNSFTPNLLASGA--DDGEICIWDLSA-PAEPSHFPPLRGNGSAAQGEISFVSWNS---KVQHI 188 (719)
Q Consensus 115 ~~~~l~~h~~~V~~l~fsp~~~~~lasgs--~dg~I~iwdl~~-~~~~~~~~~l~~~~~~h~~~I~~l~~sp---~g~~~ 188 (719)
......+|...|.++ + +++++.+++ .|+.|++|++.. ++.... + ..|...++.++|++ ++ .+
T Consensus 128 ~~l~s~g~~~~v~~l---~-~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s---~----~~~~~~v~~l~fs~~~g~~-~~ 195 (356)
T 2w18_A 128 QVLLKSGNIKAVLGL---T-KRRLVSSSGTLSDQQVEVMTFAEDGGGKEN---Q----FLMPPEETILTFAEVQGMQ-EA 195 (356)
T ss_dssp EEEEEEEEEEEEEEE---T-TTEEEEEESSSTTCEEEEEEECTTSCEEEE---E----EECCCSSCEEEEEEEETST-TE
T ss_pred cEEEeCCCeEEEEec---C-CCcEEEecccCCCCcEEEEEECCCCceeee---e----ccCCCceeeEEeeccCCCC-ce
Confidence 222223455555443 3 555565544 599999999955 433222 1 24666778888887 43 69
Q ss_pred EEEEeCCCcEEEEECCCCceeEEecCCC--CCceeEEEECCCCCcE-----------EEEEeCCCCCCcEEEEecCCCCC
Q 046451 189 LASTSYNGTTVVWDLKKQKPVISFSESI--KRRCSVLQWNPDVATQ-----------LVVASDEDSSPALRLWDMRNTMS 255 (719)
Q Consensus 189 l~s~s~dg~I~iwd~~~~~~~~~~~~~~--~~~i~~l~~sp~g~~~-----------l~~~s~d~~~~~I~lwDl~~~~~ 255 (719)
|++++.|++|+|||+++++.+.++..++ ...+.+++|+|+|..+ +++++.|+ +|++||..++ +
T Consensus 196 LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~---tIklWd~~tg-k 271 (356)
T 2w18_A 196 LLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVF---QLIVINPKTT-L 271 (356)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCE---EEEEEETTTT-E
T ss_pred EEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCc---EEEEEECCCC-E
Confidence 9999999999999999999999997322 3467788999998533 24556666 9999999865 4
Q ss_pred ceEEe-----eCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeE-EeEEcCCCCCEEEEEeCC
Q 046451 256 PVKEF-----VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNF-DIHWYPKIPGVISASSFD 329 (719)
Q Consensus 256 ~~~~~-----~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~-~l~~spdg~~~las~s~D 329 (719)
.+..+ .+|...+.+..+ ++.++++++.|++|+|||+.+++++.++.+|...+. .++|+||| .+|++|+.|
T Consensus 272 ~l~v~~~~~p~Gh~~~~lsg~~---sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG-~~LaSGS~D 347 (356)
T 2w18_A 272 SVGVMLYCLPPGQAGRFLEGDV---KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTD-SHLLAGQKD 347 (356)
T ss_dssp EEEEEEECCCTTCCCCEEEEEE---ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSS-SEEEEECTT
T ss_pred EEEEEEeeccCCCcceeEcccc---CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCC-CEEEEEECC
Confidence 44443 366666555544 367899999999999999999999999999987665 58999999 799999999
Q ss_pred CcEEEEeC
Q 046451 330 GKIGIYNI 337 (719)
Q Consensus 330 g~I~iwd~ 337 (719)
++|+|||+
T Consensus 348 ~TIklWd~ 355 (356)
T 2w18_A 348 GNIFVYHY 355 (356)
T ss_dssp SCEEEEEE
T ss_pred CcEEEecC
Confidence 99999996
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=2.6e-24 Score=235.11 Aligned_cols=298 Identities=11% Similarity=0.091 Sum_probs=212.2
Q ss_pred CccceEEEcCCC-CeEEEeeccceeecccCCCc----eEEEEEe--eccCCcccceeecccCCCCCceeeeecCC-----
Q 046451 8 NRSASVAFAPDA-PYMAAGTMAGAVDLSFSSSA----NLEIFKL--DFQSEDRDLLLVGESPSSERFNRLAWGKN----- 75 (719)
Q Consensus 8 ~~V~~vafSpdg-~~Latgs~dG~v~v~~s~~~----~i~iwd~--~~~~~~~~~~~~~~~~~~~~V~~l~~sp~----- 75 (719)
..+...+|+++| ++|++|+.+. ..++ .++|||+ ..++.... .....|...+..++|+..
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~------~~~G~~~~~i~lwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~ 133 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTP------NPDGSYNVAYQLVDTGGAPGTVLAQ---NSYKVNKQWLRYAGHTASDEVFE 133 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEE------CTTSCEEEEEEEEECSSSTTCEEEE---EEEEECGGGHHHHHHHHHHHHHH
T ss_pred cCcCHHHHHhcCCCEEEEEEEEE------CCCCeEEEEEEEEeCCCCCCCEEee---eEEEcChhHHHHHHHHHHHHHHH
Confidence 367778899988 4676886421 1223 6799999 65542211 223456677777777641
Q ss_pred ---CCCCCCCccceEEEEcCC------CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCC
Q 046451 76 ---GSGSEDFSLGLVAGGLVD------GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDG 146 (719)
Q Consensus 76 ---g~~~~~~~~~~lasgs~d------g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg 146 (719)
+.. ..+. ..|+.++.+ +.|++||++ + .....+..|...|.+++|+| ++++|++++.++
T Consensus 134 ~~~g~~-~~~~-~~l~~~s~~~~~~~~~~i~i~d~~-------g---~~~~~l~~~~~~v~~~~~Sp-dg~~la~~s~~~ 200 (415)
T 2hqs_A 134 KLTGIK-GAFR-TRIAYVVQTNGGQFPYELRVSDYD-------G---YNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFES 200 (415)
T ss_dssp HHHSSC-CCTT-CEEEEEEECSSSSCCEEEEEEETT-------S---CSCEEEEEESSCEEEEEECT-TSSEEEEEECTT
T ss_pred HHcCCC-CcCC-CEEEEEEecCCCCccceEEEEcCC-------C---CCCEEEeCCCCcceeeEEcC-CCCEEEEEEecC
Confidence 100 0001 355555443 799999983 2 45677788999999999999 889999999875
Q ss_pred ---cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCc--EEEEECCCCceeEEecCCCCCcee
Q 046451 147 ---EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGT--TVVWDLKKQKPVISFSESIKRRCS 221 (719)
Q Consensus 147 ---~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~--I~iwd~~~~~~~~~~~~~~~~~i~ 221 (719)
.|++||+.+++... + ..+...+.+++|+|+|..++++++.++. |++||+++++. ..+. .+...+.
T Consensus 201 ~~~~i~~~d~~tg~~~~----l----~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~-~~~~~~~ 270 (415)
T 2hqs_A 201 GRSALVIQTLANGAVRQ----V----ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVT-DGRSNNT 270 (415)
T ss_dssp SSCEEEEEETTTCCEEE----E----ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECC-CCSSCEE
T ss_pred CCcEEEEEECCCCcEEE----e----ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCc-CCCCccc
Confidence 99999999876432 1 1245689999999998645547776655 99999998876 4444 5778899
Q ss_pred EEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCC---CcEEEEECCCCe
Q 046451 222 VLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD---NRTICWDTVSGE 298 (719)
Q Consensus 222 ~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~D---g~I~iwd~~~~~ 298 (719)
+++|+|||+ .|++++.+++...|++||+.++. ...+..+...+.+++|+| ++++|++++.+ +.|++||+.+++
T Consensus 271 ~~~~spdg~-~l~~~s~~~g~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 271 EPTWFPDSQ-NLAFTSDQAGRPQVYKVNINGGA--PQRITWEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp EEEECTTSS-EEEEEECTTSSCEEEEEETTSSC--CEECCCSSSEEEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred ceEECCCCC-EEEEEECCCCCcEEEEEECCCCC--EEEEecCCCcccCeEECC-CCCEEEEEECcCCceEEEEEECCCCC
Confidence 999999996 45555544333368888987643 455666777899999999 88988888764 589999999887
Q ss_pred EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCC---cEEEEeCCCCcccc
Q 046451 299 IVSELPAGTNWNFDIHWYPKIPGVISASSFDG---KIGIYNIEGCSRYG 344 (719)
Q Consensus 299 ~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg---~I~iwd~~~~~~~~ 344 (719)
.. .+..+. .+.+++|+||| .+|++++.|+ .|++||+.++....
T Consensus 347 ~~-~l~~~~-~~~~~~~spdg-~~l~~~s~~~~~~~l~~~d~~g~~~~~ 392 (415)
T 2hqs_A 347 VQ-VLSSTF-LDETPSLAPNG-TMVIYSSSQGMGSVLNLVSTDGRFKAR 392 (415)
T ss_dssp EE-ECCCSS-SCEEEEECTTS-SEEEEEEEETTEEEEEEEETTSCCEEE
T ss_pred EE-EecCCC-CcCCeEEcCCC-CEEEEEEcCCCccEEEEEECCCCcEEE
Confidence 74 455554 79999999999 6776666666 79999998765543
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=9.8e-24 Score=238.18 Aligned_cols=293 Identities=12% Similarity=0.096 Sum_probs=221.6
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEe--eccCCcccceeecccCCCCCceeeeecC----CCCCCCCC
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKL--DFQSEDRDLLLVGESPSSERFNRLAWGK----NGSGSEDF 82 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~--~~~~~~~~~~~~~~~~~~~~V~~l~~sp----~g~~~~~~ 82 (719)
.+.+++|||||++|++++.++.| .+||+ .+.. +.....+...+..++|++ ++
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V----------~v~D~~~~t~~------~~~~i~~g~~p~~va~sp~~~~dg------ 237 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARI----------DMIDLWAKEPT------KVAEIKIGIEARSVESSKFKGYED------ 237 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEE----------EEEETTSSSCE------EEEEEECCSEEEEEEECCSTTCTT------
T ss_pred ccceEEECCCCCEEEEECCCCeE----------EEEECcCCCCc------EEEEEecCCCcceEEeCCCcCCCC------
Confidence 37899999999999999877655 88998 4322 222334566789999999 88
Q ss_pred ccceEEEEc-CCCcEEEEcCCccccCCCCCCCCceeeecc----------ccC-CEEEEEEeCCCCCEEEEEeCCCcEEE
Q 046451 83 SLGLVAGGL-VDGSIDIWNPLSLISSGETGGNPLIAHLSR----------HKG-PVRGLEFNSFTPNLLASGADDGEICI 150 (719)
Q Consensus 83 ~~~~lasgs-~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~----------h~~-~V~~l~fsp~~~~~lasgs~dg~I~i 150 (719)
++|++++ .+++|.|||. .+. +.+..+.. |.+ .+..+.|++++..++++...+++|.+
T Consensus 238 --~~l~v~~~~~~~v~v~D~------~t~---~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~v 306 (543)
T 1nir_A 238 --RYTIAGAYWPPQFAIMDG------ETL---EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLL 306 (543)
T ss_dssp --TEEEEEEEESSEEEEEET------TTC---CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred --CEEEEEEccCCeEEEEec------ccc---ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEE
Confidence 6777776 5899999998 444 55555543 223 78899999966677888889999999
Q ss_pred EcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCC---CCCceeEEEECC
Q 046451 151 WDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSES---IKRRCSVLQWNP 227 (719)
Q Consensus 151 wdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~---~~~~i~~l~~sp 227 (719)
||+.+.+..... .+ .+...+.++.|+++|+.+++++..+++|.+||+.+++++..+... |......+ +++
T Consensus 307 vd~~~~~~l~~~-~i-----~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p 379 (543)
T 1nir_A 307 VNYKDIDNLTVT-SI-----GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHP 379 (543)
T ss_dssp EECTTSSSCEEE-EE-----ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EET
T ss_pred EEecCCCcceeE-Ee-----ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCC
Confidence 999886644310 01 134467789999998655666667899999999999988877632 33333333 477
Q ss_pred CCCcEEEEEe-CCCCCCcEEEEecCCC------CCceEEeeCCCCCeeEEEeCCCCCCeEEEEe-------CCCcEEEEE
Q 046451 228 DVATQLVVAS-DEDSSPALRLWDMRNT------MSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA-------KDNRTICWD 293 (719)
Q Consensus 228 ~g~~~l~~~s-~d~~~~~I~lwDl~~~------~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs-------~Dg~I~iwd 293 (719)
++..+++++. .++ +|.+||+.+. .+.+.++.+|...+..|+|+| ++++|++++ .+++|.|||
T Consensus 380 ~~g~~~~s~~~~d~---~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~p-dg~~l~v~~~~~~~~~~~~~v~v~d 455 (543)
T 1nir_A 380 KYGPVWSTSHLGDG---SISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHP-KSSHLYVDTTFNPDARISQSVAVFD 455 (543)
T ss_dssp TTEEEEEEEBSSSS---EEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCT-TCCEEEECCTTCSSHHHHTCEEEEE
T ss_pred CCccEEEeccCCCc---eEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCC-CCCcEEEecCCCCCcccCceEEEEE
Confidence 7556677765 455 8999999762 477899999999999999999 999999987 378999999
Q ss_pred CCCCeEE-EEe--------cCCCCCeEEeEEcCCCCCEEEEEe----CCCcEEEEeCCCCccccc
Q 046451 294 TVSGEIV-SEL--------PAGTNWNFDIHWYPKIPGVISASS----FDGKIGIYNIEGCSRYGV 345 (719)
Q Consensus 294 ~~~~~~~-~~l--------~~h~~~v~~l~~spdg~~~las~s----~Dg~I~iwd~~~~~~~~~ 345 (719)
+.+++.+ ..+ ..+...+..+.|+++|..++++.. .|+.|.|||..++++...
T Consensus 456 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~ 520 (543)
T 1nir_A 456 LKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAV 520 (543)
T ss_dssp TTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEE
T ss_pred CCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEe
Confidence 9998876 443 355678999999999965555532 479999999999998763
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=2.3e-23 Score=235.10 Aligned_cols=325 Identities=12% Similarity=0.054 Sum_probs=229.8
Q ss_pred EEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcC
Q 046451 13 VAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLV 92 (719)
Q Consensus 13 vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~ 92 (719)
.+|+|++.++++++.++.| .+||...++....+. ....+.+++|++++ ++|++++.
T Consensus 143 ~~~~p~~~~~vs~~~d~~V----------~v~D~~t~~~~~~i~------~g~~~~~v~~spdg--------~~l~v~~~ 198 (543)
T 1nir_A 143 NDLDLPNLFSVTLRDAGQI----------ALVDGDSKKIVKVID------TGYAVHISRMSASG--------RYLLVIGR 198 (543)
T ss_dssp SCCCGGGEEEEEEGGGTEE----------EEEETTTCCEEEEEE------CSTTEEEEEECTTS--------CEEEEEET
T ss_pred cccCCCCEEEEEEcCCCeE----------EEEECCCceEEEEEe------cCcccceEEECCCC--------CEEEEECC
Confidence 3589999999988777766 788887654433321 12238899999998 79999999
Q ss_pred CCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC---CCCEEEEEe-CCCcEEEEcCCCCCCCCccCCccCC
Q 046451 93 DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF---TPNLLASGA-DDGEICIWDLSAPAEPSHFPPLRGN 168 (719)
Q Consensus 93 dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~---~~~~lasgs-~dg~I~iwdl~~~~~~~~~~~l~~~ 168 (719)
|+.|++||+.. .++ +.+..+. +...+..++|++. ++++|++++ .+++|.|||..+.+.+..+......
T Consensus 199 d~~V~v~D~~~----~t~---~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~ 270 (543)
T 1nir_A 199 DARIDMIDLWA----KEP---TKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT 270 (543)
T ss_dssp TSEEEEEETTS----SSC---EEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEEC
T ss_pred CCeEEEEECcC----CCC---cEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcc
Confidence 99999999831 123 5566666 4556899999981 457777766 5899999999887766553211000
Q ss_pred C---CCC-CCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeE--EecCCCCCceeEEEECCCCCcEEEEEeCCCCC
Q 046451 169 G---SAA-QGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVI--SFSESIKRRCSVLQWNPDVATQLVVASDEDSS 242 (719)
Q Consensus 169 ~---~~h-~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~--~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~ 242 (719)
. ..| ...+..+.+++++..++++...+++|.+||+.+.+.+. .+. +...+..+.|+|+|+++++++..++
T Consensus 271 ~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~--~~~~~~~~~~spdg~~l~va~~~~~-- 346 (543)
T 1nir_A 271 VDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG--AAPFLHDGGWDSSHRYFMTAANNSN-- 346 (543)
T ss_dssp SSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE--CCSSCCCEEECTTSCEEEEEEGGGT--
T ss_pred cCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec--cCcCccCceECCCCCEEEEEecCCC--
Confidence 0 002 23789999999888888888899999999999876554 443 5677889999999976666666666
Q ss_pred CcEEEEecCCCCCceEEeeC----CCCCeeEEEeCCCCCCeEEEEe-CCCcEEEEECCC-------CeEEEEecCCCCCe
Q 046451 243 PALRLWDMRNTMSPVKEFVG----HTKGVIAMSWCPNDSSYLLTCA-KDNRTICWDTVS-------GEIVSELPAGTNWN 310 (719)
Q Consensus 243 ~~I~lwDl~~~~~~~~~~~~----h~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~~-------~~~~~~l~~h~~~v 310 (719)
+|.+||++++ +++..+.. |.+....+ ++|+++.+++++. .|++|.|||+.+ ++++.++..|...+
T Consensus 347 -~v~v~D~~tg-~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~ 423 (543)
T 1nir_A 347 -KVAVIDSKDR-RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGS 423 (543)
T ss_dssp -EEEEEETTTT-EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCC
T ss_pred -eEEEEECCCC-eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCc
Confidence 8999999875 55666653 55444444 4673467777775 689999999998 89999999998889
Q ss_pred EEeEEcCCCCCEEEEEe-------CCCcEEEEeCCCCcccc-cCCCCCCCCCccCcceecCCCceeeeeCCcEEEEcc
Q 046451 311 FDIHWYPKIPGVISASS-------FDGKIGIYNIEGCSRYG-VGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHP 380 (719)
Q Consensus 311 ~~l~~spdg~~~las~s-------~Dg~I~iwd~~~~~~~~-~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~ 380 (719)
..+.|+|++ ..|++++ .+++|.|||+.+++... .....-..+..... .+...+.|+.||+.+.++.
T Consensus 424 ~~v~~~pdg-~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~g~~~~~s~ 497 (543)
T 1nir_A 424 LFIKTHPKS-SHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGA---KRVVQPEYNKRGDEVWFSV 497 (543)
T ss_dssp CCEECCTTC-CEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSC---CEEEEEEECSSSSEEEEEE
T ss_pred eEEEcCCCC-CcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCC---CceEeccCCCCCCEEEEEe
Confidence 999999999 6777776 37899999999987641 10000000000001 1224467888888776653
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=2.3e-23 Score=244.96 Aligned_cols=330 Identities=9% Similarity=0.021 Sum_probs=221.7
Q ss_pred cCccceEEEcCCCCeEEEeec-cceeecccCCCceEEEEEeeccCCcccceeecccCCC---------------------
Q 046451 7 INRSASVAFAPDAPYMAAGTM-AGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSS--------------------- 64 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~-dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~--------------------- 64 (719)
...+.+++|||||++||+++. +|. .....|++||++.++....+ ....+.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~-----~~~~~i~~~d~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSD-----RNQLDLWSYDIGSGQTRLLV---DSKVVLPGTETLSDEEKARRERQRIAA 107 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSC-----TTEEEEEEEETTTCCEEEEE---CGGGTC--------------------C
T ss_pred CCCCCCceEecCCCEEEEEeccCCC-----CcccEEEEEECCCCceeEcc---chhhcccccccccchhhhhhhhhhhcc
Confidence 346889999999999999987 651 01124577887755432211 111111
Q ss_pred -CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEe
Q 046451 65 -ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA 143 (719)
Q Consensus 65 -~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs 143 (719)
..|.+++|++|| ++|++++. +.|++||+.. +. ......+..|...+.+++|+| |+++|+.++
T Consensus 108 ~~~v~~~~~SpDg--------~~l~~~~~-~~i~~~d~~~------~~-~~~~~~l~~~~~~~~~~~~SP-DG~~la~~~ 170 (741)
T 2ecf_A 108 MTGIVDYQWSPDA--------QRLLFPLG-GELYLYDLKQ------EG-KAAVRQLTHGEGFATDAKLSP-KGGFVSFIR 170 (741)
T ss_dssp CEESCCCEECTTS--------SEEEEEET-TEEEEEESSS------CS-TTSCCBCCCSSSCEEEEEECT-TSSEEEEEE
T ss_pred ccCcceeEECCCC--------CEEEEEeC-CcEEEEECCC------CC-cceEEEcccCCcccccccCCC-CCCEEEEEe
Confidence 348899999998 68888775 9999999843 20 004556677888999999999 889998887
Q ss_pred CCCcEEEEcCCCCCCCCccCCccCCCC----CC--------CCCeEEEEecCCCCcEEEEEeCCC---------------
Q 046451 144 DDGEICIWDLSAPAEPSHFPPLRGNGS----AA--------QGEISFVSWNSKVQHILASTSYNG--------------- 196 (719)
Q Consensus 144 ~dg~I~iwdl~~~~~~~~~~~l~~~~~----~h--------~~~I~~l~~sp~g~~~l~s~s~dg--------------- 196 (719)
. +.|++||+.+++..... ..... ++ ...+.+++|+++|. .|++++.|+
T Consensus 171 ~-~~i~~~d~~~g~~~~~~---~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~-~l~~~~~d~~~~~~~~~~~~~p~~ 245 (741)
T 2ecf_A 171 G-RNLWVIDLASGRQMQLT---ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS-AIAYARIDESPVPVQKRYEVYADR 245 (741)
T ss_dssp T-TEEEEEETTTTEEEECC---CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS-CEEEEEEECTTSCEEEEEEECSSC
T ss_pred C-CcEEEEecCCCCEEEec---cCCccceeccccceeeeeccccccceEECCCCC-EEEEEEEcCCCCceEecCCCCCCc
Confidence 4 68999999876543221 11000 00 01247899999985 666665554
Q ss_pred ------------------cEEEEECCC-CceeEEecC-CCCCceeEEEECCCCCcEEEEEeC-CCCCCcEEEEecCCCCC
Q 046451 197 ------------------TTVVWDLKK-QKPVISFSE-SIKRRCSVLQWNPDVATQLVVASD-EDSSPALRLWDMRNTMS 255 (719)
Q Consensus 197 ------------------~I~iwd~~~-~~~~~~~~~-~~~~~i~~l~~sp~g~~~l~~~s~-d~~~~~I~lwDl~~~~~ 255 (719)
.|++||+.+ ++....... .+...+..++| +||+.+++++.. ......|++||+.++ +
T Consensus 246 ~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g-~ 323 (741)
T 2ecf_A 246 TDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN-Q 323 (741)
T ss_dssp EEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC-C
T ss_pred ccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC-c
Confidence 789999998 776544331 36778999999 999755555442 212337999999875 4
Q ss_pred ceEEeeCCCC----CeeEEEeCCCCCCeEEEEeCCCcEEEEECC-CCeEEEEecCCCCCeEEe-EEcCCCCCEEEEEeCC
Q 046451 256 PVKEFVGHTK----GVIAMSWCPNDSSYLLTCAKDNRTICWDTV-SGEIVSELPAGTNWNFDI-HWYPKIPGVISASSFD 329 (719)
Q Consensus 256 ~~~~~~~h~~----~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~-~~~~~~~l~~h~~~v~~l-~~spdg~~~las~s~D 329 (719)
....+..+.. .+.+++|++ |++++++++.||.++||.+. +++ +..+..|...|.++ .|++++..++++++.|
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~ 401 (741)
T 2ecf_A 324 QRVLAHETSPTWVPLHNSLRFLD-DGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIE 401 (741)
T ss_dssp EEEEEEEECSSCCCCCSCCEECT-TSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSS
T ss_pred eEEEEEcCCCCcCCcCCceEECC-CCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCC
Confidence 4444444433 456899999 88899999999988888765 455 77788887788887 5999995566677766
Q ss_pred C--cEEEEeCCC-CcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCC
Q 046451 330 G--KIGIYNIEG-CSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKS 382 (719)
Q Consensus 330 g--~I~iwd~~~-~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~ 382 (719)
+ .++||++.. +........ ......++|++||+.+++...+
T Consensus 402 ~~~~~~l~~~~~~g~~~~~l~~------------~~~~~~~~~spdg~~l~~~~~~ 445 (741)
T 2ecf_A 402 SARESQIYAVPLQGGQPQRLSK------------APGMHSASFARNASVYVDSWSN 445 (741)
T ss_dssp CTTCBEEEEEETTCCCCEECCC------------SCSEEEEEECTTSSEEEEEEEE
T ss_pred CCceEEEEEEEcCCCCeeeccc------------CCCceEEEECCCCCEEEEEecC
Confidence 6 899999864 322111110 0011247899999988776543
No 131
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=9.9e-24 Score=218.05 Aligned_cols=189 Identities=13% Similarity=0.063 Sum_probs=143.4
Q ss_pred ceEEEEc--CCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeC--CCCCEEEEEeCCCcEEEEcCCCCCCCC
Q 046451 85 GLVAGGL--VDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNS--FTPNLLASGADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 85 ~~lasgs--~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp--~~~~~lasgs~dg~I~iwdl~~~~~~~ 160 (719)
+++.+++ .|+.|++|++. .++ +.+..+..|...+..++|++ .++.+|++++.|++|+|||+.+++.+.
T Consensus 146 ~lv~ss~~g~d~~V~~~~~s-----~dG---~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~ 217 (356)
T 2w18_A 146 RLVSSSGTLSDQQVEVMTFA-----EDG---GGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLK 217 (356)
T ss_dssp EEEEEESSSTTCEEEEEEEC-----TTS---CEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEE
T ss_pred cEEEecccCCCCcEEEEEEC-----CCC---ceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEE
Confidence 4555543 59999999984 335 67778888998888888887 356899999999999999999998776
Q ss_pred ccCCccCCCCCCCCCeEEEEecCCCCcEE------------EEEeCCCcEEEEECCCCceeEEec----CCCCCceeEEE
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSKVQHIL------------ASTSYNGTTVVWDLKKQKPVISFS----ESIKRRCSVLQ 224 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~g~~~l------------~s~s~dg~I~iwd~~~~~~~~~~~----~~~~~~i~~l~ 224 (719)
.+ ..+ ..+...+.+++|+++|. ++ ++|+.|++|++||..+++.+..+. .+|...+.+..
T Consensus 218 tL---~g~-~~~v~~v~~vafSpdG~-~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~ 292 (356)
T 2w18_A 218 KM---HID-DSYQASVCHKAYSEMGL-LFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGD 292 (356)
T ss_dssp EE---ECC-C---CCCEEEEEEETTE-EEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEE
T ss_pred EE---cCC-CcceeeeEEEEECCCCC-EEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccc
Confidence 63 321 11234788889999974 44 678889999999999998876552 24555555445
Q ss_pred ECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCee-EEEeCCCCCCeEEEEeCCCcEEEEEC
Q 046451 225 WNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVI-AMSWCPNDSSYLLTCAKDNRTICWDT 294 (719)
Q Consensus 225 ~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~-~v~~sp~d~~~l~sgs~Dg~I~iwd~ 294 (719)
++ + .++++++.|+ +|+|||++++ +++.++.+|...+. +++|+| |+++|++|+.|++|+|||+
T Consensus 293 ~s--g-~~lASgS~Dg---TIkIWDl~tG-k~l~tL~gH~~~vvs~vafSP-DG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 293 VK--D-HCAAAILTSG---TIAIWDLLLG-QCTALLPPVSDQHWSFVKWSG-TDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EE--T-TEEEEEETTS---CEEEEETTTC-SEEEEECCC--CCCCEEEECS-SSSEEEEECTTSCEEEEEE
T ss_pred cC--C-CEEEEEcCCC---cEEEEECCCC-cEEEEecCCCCCeEEEEEECC-CCCEEEEEECCCcEEEecC
Confidence 54 3 5788999998 9999999875 77889999988765 589999 9999999999999999995
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=9.6e-23 Score=222.70 Aligned_cols=303 Identities=14% Similarity=0.105 Sum_probs=214.7
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEc----CCC----cEEEEcC--CccccCCCCCCCCce--eeeccccCCEEEEEEe
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGL----VDG----SIDIWNP--LSLISSGETGGNPLI--AHLSRHKGPVRGLEFN 132 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs----~dg----~I~lwd~--~~~~~~~~~~~~~~~--~~l~~h~~~V~~l~fs 132 (719)
..++..+|...+. .++++|+ .|| .|+|||+ .+ + +.+ ..+.+|...+..++++
T Consensus 63 ~~~~~~~w~~~g~-------~~~~~g~~~~~~~G~~~~~i~lwd~~~~~------~---~~~~~~~~~~~~~~~~~~~~~ 126 (415)
T 2hqs_A 63 QEVQPAAWSALGI-------DAVVVGQVTPNPDGSYNVAYQLVDTGGAP------G---TVLAQNSYKVNKQWLRYAGHT 126 (415)
T ss_dssp GGCCHHHHHTTTC-------CEEEEEEEEECTTSCEEEEEEEEECSSST------T---CEEEEEEEEECGGGHHHHHHH
T ss_pred cCcCHHHHHhcCC-------CEEEEEEEEECCCCeEEEEEEEEeCCCCC------C---CEEeeeEEEcChhHHHHHHHH
Confidence 5778889998874 6777776 467 8999998 43 2 333 5578888888877776
Q ss_pred CC-------------CCCEEEEEeCC------CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe
Q 046451 133 SF-------------TPNLLASGADD------GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS 193 (719)
Q Consensus 133 p~-------------~~~~lasgs~d------g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s 193 (719)
.. .+..|+.++.+ +.|++||+... .... +. .|...+.+++|+|+| ..|++++
T Consensus 127 ~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~---l~----~~~~~v~~~~~Spdg-~~la~~s 197 (415)
T 2hqs_A 127 ASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGY-NQFV---VH----RSPQPLMSPAWSPDG-SKLAYVT 197 (415)
T ss_dssp HHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSC-SCEE---EE----EESSCEEEEEECTTS-SEEEEEE
T ss_pred HHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCC-CCEE---Ee----CCCCcceeeEEcCCC-CEEEEEE
Confidence 31 14566666554 79999999753 3333 22 356789999999998 4788888
Q ss_pred CCC---cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEE
Q 046451 194 YNG---TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAM 270 (719)
Q Consensus 194 ~dg---~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v 270 (719)
.++ .|++||+++++... +. .+...+.+++|+|||+.++++++.++ ...|++||+++. + ...+..|...+.++
T Consensus 198 ~~~~~~~i~~~d~~tg~~~~-l~-~~~~~~~~~~~spdg~~la~~~~~~g-~~~i~~~d~~~~-~-~~~l~~~~~~~~~~ 272 (415)
T 2hqs_A 198 FESGRSALVIQTLANGAVRQ-VA-SFPRHNGAPAFSPDGSKLAFALSKTG-SLNLYVMDLASG-Q-IRQVTDGRSNNTEP 272 (415)
T ss_dssp CTTSSCEEEEEETTTCCEEE-EE-CCSSCEEEEEECTTSSEEEEEECTTS-SCEEEEEETTTC-C-EEECCCCSSCEEEE
T ss_pred ecCCCcEEEEEECCCCcEEE-ee-cCCCcccCEEEcCCCCEEEEEEecCC-CceEEEEECCCC-C-EEeCcCCCCcccce
Confidence 775 99999999988764 33 46778999999999975555666554 236999999764 2 46777888899999
Q ss_pred EeCCCCCCeEEEEeC-CC--cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCC---CcEEEEeCCCCcccc
Q 046451 271 SWCPNDSSYLLTCAK-DN--RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFD---GKIGIYNIEGCSRYG 344 (719)
Q Consensus 271 ~~sp~d~~~l~sgs~-Dg--~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~D---g~I~iwd~~~~~~~~ 344 (719)
+|+| |+++|++++. ++ .|++||+.+++. ..+..+...+.+++|+||| .+|++++.+ ..|++||+.+++...
T Consensus 273 ~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG-~~l~~~~~~~g~~~i~~~d~~~~~~~~ 349 (415)
T 2hqs_A 273 TWFP-DSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDG-KFMVMVSSNGGQQHIAKQDLATGGVQV 349 (415)
T ss_dssp EECT-TSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTS-SEEEEEEECSSCEEEEEEETTTCCEEE
T ss_pred EECC-CCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCC-CEEEEEECcCCceEEEEEECCCCCEEE
Confidence 9999 8898888776 44 688889988764 4455667789999999999 566666543 589999999987754
Q ss_pred cCCCCCCCCCccCcceecCCCceee-eeCC---cEEEEccCCCCCccccccccccceeeccCCCC
Q 046451 345 VGDSNFSAAPLRAPKWYKRPAGASF-GFGG---KLVSFHPKSSAGHTSENSQHAPVHGVDQSKYG 405 (719)
Q Consensus 345 ~~~~~~~~~~~~~p~w~~~~~~~s~-s~~G---klv~~~~~~~~~~~~~~~~~~~v~~v~~s~~~ 405 (719)
...+. ....+.|..+...+.+ +.++ ++..|+.+ +...+.+.+|.+.|.++++||..
T Consensus 350 l~~~~----~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 350 LSSTF----LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp CCCSS----SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCC
T ss_pred ecCCC----CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccc
Confidence 33221 2244555544433222 2222 34445443 33455678899999999999874
No 133
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=3.1e-22 Score=234.48 Aligned_cols=328 Identities=9% Similarity=0.030 Sum_probs=209.2
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCC---CCceeeeecCCCCCCCCCcc
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSS---ERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~---~~V~~l~~sp~g~~~~~~~~ 84 (719)
..+.+++|||||++|++ +.||.| ++||+..+.....+ ..+. ..|.+++|||||
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i----------~~~d~~~g~~~~~~-----~~~~~~~~~v~~~~~SpDg-------- 72 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTV----------RLWNVETNTSTVLI-----EGKKIESLRAIRYEISPDR-------- 72 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCE----------EEBCGGGCCCEEEE-----CTTTTTTTTCSEEEECTTS--------
T ss_pred ccccccEEcCCCcEEEE-eCCCCE----------EEEECCCCcEEEEe-----ccccccccccceEEECCCC--------
Confidence 44788999999998876 556654 88988876543221 1122 258999999999
Q ss_pred ceEEEEcCC---------CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCC
Q 046451 85 GLVAGGLVD---------GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA 155 (719)
Q Consensus 85 ~~lasgs~d---------g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~ 155 (719)
++|++++.+ +.|++||+. ++.. ..+.....|...+..++|+| |+++|+.++. +.|++||+.+
T Consensus 73 ~~l~~~~~~~~~~~~~~~~~i~~~d~~------~~~~-~~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~ 143 (723)
T 1xfd_A 73 EYALFSYNVEPIYQHSYTGYYVLSKIP------HGDP-QSLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVG 143 (723)
T ss_dssp SEEEEEESCCCCSSSCCCSEEEEEESS------SCCC-EECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSS
T ss_pred CEEEEEecCccceeecceeeEEEEECC------CCce-EeccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCC
Confidence 688888764 788899984 3310 12222334555689999999 8888988886 7999999988
Q ss_pred CCCCCccCCccCCCCCC--------------CCCeEEEEecCCCCcEEEEEeCCC-------------------------
Q 046451 156 PAEPSHFPPLRGNGSAA--------------QGEISFVSWNSKVQHILASTSYNG------------------------- 196 (719)
Q Consensus 156 ~~~~~~~~~l~~~~~~h--------------~~~I~~l~~sp~g~~~l~s~s~dg------------------------- 196 (719)
++..... ....... .+.+.+++|+|+|. .|++++.|+
T Consensus 144 g~~~~~~---~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~-~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 144 KQAIRVV---STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGT-RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SCCEEEE---CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSS-EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred CceEEEe---cCCCCCceECcccceeEEEEeccCcceEEECCCCC-EEEEEEECCCccceEEeeccCCcCCCcceeccCC
Confidence 7654321 1100000 11347899999985 666665442
Q ss_pred ---------cEEEEECCCCceeEEecCC-----CCCceeEEEECCCCCcEEEEEe-CCCCCCcEEEEecCCCCCceEEee
Q 046451 197 ---------TTVVWDLKKQKPVISFSES-----IKRRCSVLQWNPDVATQLVVAS-DEDSSPALRLWDMRNTMSPVKEFV 261 (719)
Q Consensus 197 ---------~I~iwd~~~~~~~~~~~~~-----~~~~i~~l~~sp~g~~~l~~~s-~d~~~~~I~lwDl~~~~~~~~~~~ 261 (719)
.|++||+.+++....+... +...+..++|+|||+ ++++.. .+.....|++||+.++ +....+.
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~g-~~~~~~~ 297 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATTG-VCTKKHE 297 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTTC-CEEEEEE
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeCCCC-cceEEEE
Confidence 7999999988765555521 256789999999996 454443 3222347999999875 4444433
Q ss_pred C-CCCCee----EEEeCCCCCCeEEE--EeCCC------cEEEEE-CCCCe--EEEEecCCCCCeEE-eEEcCCCCCEEE
Q 046451 262 G-HTKGVI----AMSWCPNDSSYLLT--CAKDN------RTICWD-TVSGE--IVSELPAGTNWNFD-IHWYPKIPGVIS 324 (719)
Q Consensus 262 ~-h~~~V~----~v~~sp~d~~~l~s--gs~Dg------~I~iwd-~~~~~--~~~~l~~h~~~v~~-l~~spdg~~~la 324 (719)
. +...+. .++|+| |++.|+. +..++ .|.+|| ...++ +...+..+...+.. ++|++||..+++
T Consensus 298 ~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~ 376 (723)
T 1xfd_A 298 DESEAWLHRQNEEPVFSK-DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYF 376 (723)
T ss_dssp EECSSCCCCCCCCCEECT-TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEE
T ss_pred eccCCEEeccCCCceEcC-CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEE
Confidence 3 334443 789999 7876664 45666 577777 34444 14455543344554 699999944444
Q ss_pred EEeCC--CcEEEEeCCCCcc--cccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCC
Q 046451 325 ASSFD--GKIGIYNIEGCSR--YGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 325 s~s~D--g~I~iwd~~~~~~--~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
++..+ +.++||++..... .......+. . ......++|+.||+.+++...+.
T Consensus 377 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~-----~---~~~~~~~~~spdg~~l~~~~~~~ 431 (723)
T 1xfd_A 377 LSTEDLPRRRQLYSANTVGNFNRQCLSCDLV-----E---NCTYFSASFSHSMDFFLLKCEGP 431 (723)
T ss_dssp EESSSCTTCCEEEEECSSTTCCCBCSSTTSS-----S---SCCCCEEEECTTSSEEEEECCSS
T ss_pred EEcCCCCcceEEEEEeCCCCCCcceeccccc-----C---CCCeEEEEECCCCCEEEEEccCC
Confidence 55555 8899999875321 110000000 0 01123578999999888765544
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=1.8e-21 Score=204.95 Aligned_cols=282 Identities=8% Similarity=0.083 Sum_probs=194.4
Q ss_pred EEEcCCCCe-EEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEc
Q 046451 13 VAFAPDAPY-MAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGL 91 (719)
Q Consensus 13 vafSpdg~~-Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs 91 (719)
..|+.++++ ++++..++.| .+||+..++....+. .+...+ +++|++++. .+++++.
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v----------~~~d~~~~~~~~~~~-----~~~~~~-~~~~s~dg~-------~l~~~~~ 59 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRI----------SFFSTDTLEILNQIT-----LGYDFV-DTAITSDCS-------NVVVTSD 59 (331)
T ss_dssp ----CCCCEEEEEEGGGTEE----------EEEETTTCCEEEEEE-----CCCCEE-EEEECSSSC-------EEEEEES
T ss_pred eeEcCCCCEEEEEecCCCeE----------EEEeCcccceeeeEE-----ccCCcc-eEEEcCCCC-------EEEEEeC
Confidence 456777665 5555555544 889887654432221 124445 999999982 3455555
Q ss_pred CCCcEEEEcCCccccCCCCCCCCc-eeeeccccCCEEEEEEeCCCCCEEEEEeCCC---cEEEEcCCCCCCCCccCCccC
Q 046451 92 VDGSIDIWNPLSLISSGETGGNPL-IAHLSRHKGPVRGLEFNSFTPNLLASGADDG---EICIWDLSAPAEPSHFPPLRG 167 (719)
Q Consensus 92 ~dg~I~lwd~~~~~~~~~~~~~~~-~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg---~I~iwdl~~~~~~~~~~~l~~ 167 (719)
.++.|.+||+ .++ +. ...+..+.....+++|++ ++++|+++..++ .|++||+.+++....+ .
T Consensus 60 ~~~~i~~~d~------~~~---~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~---~- 125 (331)
T 3u4y_A 60 FCQTLVQIET------QLE---PPKVVAIQEGQSSMADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFISTI---P- 125 (331)
T ss_dssp TTCEEEEEEC------SSS---SCEEEEEEECSSCCCCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEEEEE---E-
T ss_pred CCCeEEEEEC------CCC---ceeEEecccCCCCccceEECC-CCCEEEEecCCCCcccEEEEECCCCCeEEEE---E-
Confidence 5899999998 444 44 566666666665599999 788888555553 8999999887654432 1
Q ss_pred CCCCCCCCeEEEEecCCCCcEEEEEeCCCc-EEEEECCCCceeE----EecCCCCCceeEEEECCCCCcEEEEEeCCCCC
Q 046451 168 NGSAAQGEISFVSWNSKVQHILASTSYNGT-TVVWDLKKQKPVI----SFSESIKRRCSVLQWNPDVATQLVVASDEDSS 242 (719)
Q Consensus 168 ~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~-I~iwd~~~~~~~~----~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~ 242 (719)
......+++|+++|..++++...++. |.+|++.....+. ... ........++|+++|+.+++++..++
T Consensus 126 ----~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~-- 198 (331)
T 3u4y_A 126 ----IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGN-- 198 (331)
T ss_dssp ----CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTT--
T ss_pred ----CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCC--
Confidence 12356899999998767777777788 9999998644332 111 24556899999999976666666666
Q ss_pred CcEEEEecCCCCCc---eEEeeCCCCCeeEEEeCCCCCCeEEEEe-CCCcEEEEECCCCeE--EEEecCC----CCC---
Q 046451 243 PALRLWDMRNTMSP---VKEFVGHTKGVIAMSWCPNDSSYLLTCA-KDNRTICWDTVSGEI--VSELPAG----TNW--- 309 (719)
Q Consensus 243 ~~I~lwDl~~~~~~---~~~~~~h~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~~~~~--~~~l~~h----~~~--- 309 (719)
.|++||+++. +. +..+.. ...+..++|+| ++++|++++ .++.|.+||+.+++. +..+..+ ...
T Consensus 199 -~v~v~d~~~~-~~~~~~~~~~~-~~~~~~~~~sp-dg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (331)
T 3u4y_A 199 -SIGILETQNP-ENITLLNAVGT-NNLPGTIVVSR-DGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFG 274 (331)
T ss_dssp -EEEEEECSST-TSCEEEEEEEC-SSCCCCEEECT-TSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTT
T ss_pred -eEEEEECCCC-cccceeeeccC-CCCCceEEECC-CCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCccc
Confidence 8999999865 44 555553 36778999999 888666554 578899999999887 4444332 222
Q ss_pred eEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 310 NFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 310 v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
...++|++|+..+++++..++.|.|||+.+...
T Consensus 275 ~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 275 ANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred ccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 245899999955556666678999999987654
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=1.4e-21 Score=206.22 Aligned_cols=274 Identities=9% Similarity=0.090 Sum_probs=180.7
Q ss_pred ceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCC-CcEEEEcCCccccCCCCCCCCcee
Q 046451 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVD-GSIDIWNPLSLISSGETGGNPLIA 117 (719)
Q Consensus 39 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~d-g~I~lwd~~~~~~~~~~~~~~~~~ 117 (719)
+.|++|+++.... +.......+...+.+++|++++ ++|++++.+ +.|.+|+++. .++ ....+.
T Consensus 15 ~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~spdg--------~~l~~~~~~~~~v~~~~~~~----~~~-~~~~~~ 78 (343)
T 1ri6_A 15 QQIHVWNLNHEGA---LTLTQVVDVPGQVQPMVVSPDK--------RYLYVGVRPEFRVLAYRIAP----DDG-ALTFAA 78 (343)
T ss_dssp TEEEEEEECTTSC---EEEEEEEECSSCCCCEEECTTS--------SEEEEEETTTTEEEEEEECT----TTC-CEEEEE
T ss_pred CeEEEEEECCCCc---EEEeeeEecCCCCceEEECCCC--------CEEEEeecCCCeEEEEEecC----CCC-ceeecc
Confidence 3448899864221 1223334567789999999998 667776665 9999999841 011 112334
Q ss_pred eeccccCCEEEEEEeCCCCCEEEEEe-CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe-CC
Q 046451 118 HLSRHKGPVRGLEFNSFTPNLLASGA-DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS-YN 195 (719)
Q Consensus 118 ~l~~h~~~V~~l~fsp~~~~~lasgs-~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s-~d 195 (719)
.+..+. .+.+++|++ ++++|++++ .++.|++||+..+........+. ....+.+++|++++. +|++++ .+
T Consensus 79 ~~~~~~-~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~s~dg~-~l~~~~~~~ 150 (343)
T 1ri6_A 79 ESALPG-SLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-----GLDGCHSANISPDNR-TLWVPALKQ 150 (343)
T ss_dssp EEECSS-CCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-----CCTTBCCCEECTTSS-EEEEEEGGG
T ss_pred ccccCC-CCcEEEEcC-CCCEEEEEecCCCeEEEEECCCCcccccccccc-----CCCCceEEEECCCCC-EEEEecCCC
Confidence 444333 789999999 777666555 58899999995222111110011 223588999999985 555555 89
Q ss_pred CcEEEEECCC-CceeE----EecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC-Cc--eEEee----CC
Q 046451 196 GTTVVWDLKK-QKPVI----SFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM-SP--VKEFV----GH 263 (719)
Q Consensus 196 g~I~iwd~~~-~~~~~----~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~-~~--~~~~~----~h 263 (719)
+.|++||+.+ ++... .+.......+..++|+++++.+++++..++ .|++||++... .. +..+. ++
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~---~i~~~~~~~~~g~~~~~~~~~~~~~~~ 227 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS---SVDVWELKDPHGNIECVQTLDMMPENF 227 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT---EEEEEESSCTTSCCEEEEEEECSCTTC
T ss_pred CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCC---EEEEEEecCCCCcEEEEeeccccCccc
Confidence 9999999987 54432 223234557889999999975556655665 89999996421 21 22222 11
Q ss_pred --CCCeeEEEeCCCCCCeEE-EEeCCCcEEEEECC----CCeEEEEecCCCCCeEEeEEcCCCCCEEEEEe-CCCcEEEE
Q 046451 264 --TKGVIAMSWCPNDSSYLL-TCAKDNRTICWDTV----SGEIVSELPAGTNWNFDIHWYPKIPGVISASS-FDGKIGIY 335 (719)
Q Consensus 264 --~~~V~~v~~sp~d~~~l~-sgs~Dg~I~iwd~~----~~~~~~~l~~h~~~v~~l~~spdg~~~las~s-~Dg~I~iw 335 (719)
...+.+++|++ ++++|+ ++..++.|++||+. +.+.+..+..+.. +.+++|++++ .+|++++ .|+.|.+|
T Consensus 228 ~~~~~~~~i~~s~-dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg-~~l~~~~~~~~~v~v~ 304 (343)
T 1ri6_A 228 SDTRWAADIHITP-DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSG-KYLIAAGQKSHHISVY 304 (343)
T ss_dssp CSCCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTS-SEEEEECTTTCEEEEE
T ss_pred cccCCccceEECC-CCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCC-CEEEEecCCCCeEEEE
Confidence 23566899999 777766 45579999999998 3355556665555 8999999999 5555554 78999999
Q ss_pred eCC--CCcc
Q 046451 336 NIE--GCSR 342 (719)
Q Consensus 336 d~~--~~~~ 342 (719)
+++ +++.
T Consensus 305 ~~d~~~g~~ 313 (343)
T 1ri6_A 305 EIVGEQGLL 313 (343)
T ss_dssp EEETTTTEE
T ss_pred EEcCCCcee
Confidence 554 5544
No 136
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=5.4e-21 Score=203.08 Aligned_cols=292 Identities=11% Similarity=0.121 Sum_probs=193.9
Q ss_pred eEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcC---CCcEE
Q 046451 21 YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLV---DGSID 97 (719)
Q Consensus 21 ~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~---dg~I~ 97 (719)
+|++|+..+ ..++.+.+|+++..... +.......+...+..++|++++ + |++++. ++.|+
T Consensus 4 ~~~vg~y~~------~~~~~i~v~~~d~~tg~--~~~~~~~~~~~~p~~~a~spdg--------~-l~~~~~~~~~~~v~ 66 (347)
T 3hfq_A 4 RILFGTYTK------KTSQGIYQGTLDTTAKT--LTNDGLLAATQNPTYLALSAKD--------C-LYSVDKEDDEGGIA 66 (347)
T ss_dssp EEEEEECCS------SSCCEEEEEEEETTTTE--EEEEEEEEECSCCCCEEECTTC--------E-EEEEEEETTEEEEE
T ss_pred EEEEEeccC------CCCCCEEEEEEcCCCCe--EEEeeeeeccCCcceEEEccCC--------e-EEEEEecCCCceEE
Confidence 466665432 23556788888854322 2222333455778899999998 6 444443 68999
Q ss_pred EEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEe-CCCcEEEEcCCCCCCCCccCCccCCCC-----C
Q 046451 98 IWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA-DDGEICIWDLSAPAEPSHFPPLRGNGS-----A 171 (719)
Q Consensus 98 lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs-~dg~I~iwdl~~~~~~~~~~~l~~~~~-----~ 171 (719)
+|++.. + ....+..+..+...+..++|++ ++++|++++ .++.|.+||+........+..+..... .
T Consensus 67 ~~~~~~------g-~~~~~~~~~~~~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~ 138 (347)
T 3hfq_A 67 AWQIDG------Q-TAHKLNTVVAPGTPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQ 138 (347)
T ss_dssp EEEEET------T-EEEEEEEEEEESCCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTC
T ss_pred EEEecC------C-cEEEeeeeecCCCCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccc
Confidence 999832 2 0134445555778889999999 788777777 789999999964333222111111000 1
Q ss_pred CCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC-CCcee--EEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEE
Q 046451 172 AQGEISFVSWNSKVQHILASTSYNGTTVVWDLK-KQKPV--ISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLW 248 (719)
Q Consensus 172 h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~-~~~~~--~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lw 248 (719)
....+.+++|+++|. ++++...++.|++||+. +++.. ..+..........++|++||+.+++++..++ .|++|
T Consensus 139 ~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~---~v~v~ 214 (347)
T 3hfq_A 139 DGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSS---QIASL 214 (347)
T ss_dssp SSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT---EEEEE
T ss_pred cCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCC---EEEEE
Confidence 223588999999986 77777788999999998 44432 2222223446788999999965565555565 89999
Q ss_pred ecCCCCCc---eEEeeCCC------CCeeEEEeCCCCCCeE-EEEeCCCcEEEEECC---CCeEEEEecCCCCCeEEeEE
Q 046451 249 DMRNTMSP---VKEFVGHT------KGVIAMSWCPNDSSYL-LTCAKDNRTICWDTV---SGEIVSELPAGTNWNFDIHW 315 (719)
Q Consensus 249 Dl~~~~~~---~~~~~~h~------~~V~~v~~sp~d~~~l-~sgs~Dg~I~iwd~~---~~~~~~~l~~h~~~v~~l~~ 315 (719)
|+...... +..+.... ..+..++|+| |+++| +++..++.|.+||+. ..+.+..+..+...+.+++|
T Consensus 215 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~ 293 (347)
T 3hfq_A 215 KYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH-DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDL 293 (347)
T ss_dssp EEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT-TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEE
T ss_pred EecCCCCceEEeeeeeecCCCCCCCCcceeEEECC-CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEE
Confidence 98742121 22232222 3488899999 88876 556678999999997 33566667777777899999
Q ss_pred cCCCCCEEEEEe-CCCcEEEE--eCCCCccc
Q 046451 316 YPKIPGVISASS-FDGKIGIY--NIEGCSRY 343 (719)
Q Consensus 316 spdg~~~las~s-~Dg~I~iw--d~~~~~~~ 343 (719)
++|| ++|++++ .++.|.+| |.+++++.
T Consensus 294 spdg-~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 294 DPTE-AFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp CTTS-SEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCCC-CEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 9999 5555555 55899999 44556554
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.88 E-value=2.4e-20 Score=197.73 Aligned_cols=279 Identities=10% Similarity=0.042 Sum_probs=201.4
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
...+..++|++||++|++++.++.- ...++.|.+||...++....+ .....+.+++|++++. .+
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~---~~~~~~v~~~d~~~~~~~~~~------~~~~~~~~~~~s~dg~-------~l 103 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRK---LDKGGVVYRLDPVTLEVTQAI------HNDLKPFGATINNTTQ-------TL 103 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTT---TEESEEEEEECTTTCCEEEEE------EESSCCCSEEEETTTT-------EE
T ss_pred ccCccceEECCCCCEEEEEcCCCcC---CCCCccEEEEcCCCCeEEEEE------ecCCCcceEEECCCCC-------EE
Confidence 3567889999999999888754310 012456688887755433322 2345578999999983 36
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCC---------EEEEEEeCCCCCEEEEEe--CCCcEEEEcCCC
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGP---------VRGLEFNSFTPNLLASGA--DDGEICIWDLSA 155 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~---------V~~l~fsp~~~~~lasgs--~dg~I~iwdl~~ 155 (719)
++++..++.|.+||+ .++ +.+..+..+... +.+++|++ ++++|++++ .++.|.+||+.+
T Consensus 104 ~v~~~~~~~v~~~d~------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~ 173 (353)
T 3vgz_A 104 WFGNTVNSAVTAIDA------KTG---EVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGN 173 (353)
T ss_dssp EEEETTTTEEEEEET------TTC---CEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTT
T ss_pred EEEecCCCEEEEEeC------CCC---eeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCC
Confidence 666777899999998 444 555555544322 78899999 677666655 478999999988
Q ss_pred CCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC---CCCCceeEEEECCCCCcE
Q 046451 156 PAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE---SIKRRCSVLQWNPDVATQ 232 (719)
Q Consensus 156 ~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~---~~~~~i~~l~~sp~g~~~ 232 (719)
.+....+ . .+...+.+++|++++ ..|++++.++.|.+||+.+++.+..+.. .+...+..++|+++++.+
T Consensus 174 ~~~~~~~---~----~~~~~~~~~~~s~dg-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 245 (353)
T 3vgz_A 174 IKLKTAI---Q----NTGKMSTGLALDSEG-KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRA 245 (353)
T ss_dssp TEEEEEE---C----CCCTTCCCCEEETTT-TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEE
T ss_pred CceEEEe---c----CCCCccceEEECCCC-CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEE
Confidence 7655442 1 123357789999997 4788888899999999999988877763 245567889999999766
Q ss_pred EEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe-CCCcEEEEECCCCeEEEEecCCCCCeE
Q 046451 233 LVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA-KDNRTICWDTVSGEIVSELPAGTNWNF 311 (719)
Q Consensus 233 l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~~~~~~~~l~~h~~~v~ 311 (719)
+++...++ .|.+||+.+. +.+..+.... ...++|++ ++++|++++ .++.|.+||+.+++.+..+..+. .+.
T Consensus 246 ~~~~~~~~---~v~~~d~~~~-~~~~~~~~~~--~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~ 317 (353)
T 3vgz_A 246 FITDSKAA---EVLVVDTRNG-NILAKVAAPE--SLAVLFNP-ARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT-HPN 317 (353)
T ss_dssp EEEESSSS---EEEEEETTTC-CEEEEEECSS--CCCEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEEEECCS-EEE
T ss_pred EEEeCCCC---EEEEEECCCC-cEEEEEEcCC--CceEEECC-CCCEEEEEECCCCeEEEEECCCCeEEEEEecCC-CCC
Confidence 55555545 8999999775 5555555433 35799999 777555554 78999999999999998887654 589
Q ss_pred EeEEcCCCCCEEEEEe
Q 046451 312 DIHWYPKIPGVISASS 327 (719)
Q Consensus 312 ~l~~spdg~~~las~s 327 (719)
+++|+++|..++++..
T Consensus 318 ~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 318 SLALSADGKTLYVSVK 333 (353)
T ss_dssp EEEECTTSCEEEEEEE
T ss_pred eEEEcCCCCEEEEEEc
Confidence 9999999943444444
No 138
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=4.6e-21 Score=196.99 Aligned_cols=253 Identities=13% Similarity=0.136 Sum_probs=182.2
Q ss_pred CCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCC-CCCCCc
Q 046451 37 SSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGE-TGGNPL 115 (719)
Q Consensus 37 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~-~~~~~~ 115 (719)
.++.|++||+..+... ....|...|.+++|++++ ++|++++ ++.|++||+. + + ..
T Consensus 20 ~~~~i~~~d~~~~~~~------~~~~~~~~v~~~~~spdg--------~~l~~~~-~~~i~~~d~~------~~~---~~ 75 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMR------VVWQTPELFEAPNWSPDG--------KYLLLNS-EGLLYRLSLA------GDP---SP 75 (297)
T ss_dssp CCEEEEEEETTTTEEE------EEEEESSCCEEEEECTTS--------SEEEEEE-TTEEEEEESS------SCC---SC
T ss_pred cceeEEEEeCCCCcee------eeccCCcceEeeEECCCC--------CEEEEEc-CCeEEEEeCC------CCC---Cc
Confidence 4566799998754322 223467899999999998 6788876 8899999983 3 3 44
Q ss_pred eeeeccc-cCCEEEEEEeCCCCCEEEEEe--CCCcEEEEcC--CCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEE
Q 046451 116 IAHLSRH-KGPVRGLEFNSFTPNLLASGA--DDGEICIWDL--SAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILA 190 (719)
Q Consensus 116 ~~~l~~h-~~~V~~l~fsp~~~~~lasgs--~dg~I~iwdl--~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~ 190 (719)
...+..| ...+.+++|++ ++++|++++ .++.+.||++ .+.. ... +. +...+.+++|++++..+++
T Consensus 76 ~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~---~~-----~~~~~~~~~~spdg~~l~~ 145 (297)
T 2ojh_A 76 EKVDTGFATICNNDHGISP-DGALYAISDKVEFGKSAIYLLPSTGGT-PRL---MT-----KNLPSYWHGWSPDGKSFTY 145 (297)
T ss_dssp EECCCTTCCCBCSCCEECT-TSSEEEEEECTTTSSCEEEEEETTCCC-CEE---CC-----SSSSEEEEEECTTSSEEEE
T ss_pred eEeccccccccccceEECC-CCCEEEEEEeCCCCcceEEEEECCCCc-eEE---ee-----cCCCccceEECCCCCEEEE
Confidence 4444444 46789999999 788999888 3345555544 4433 222 11 1224889999999865555
Q ss_pred EEeCCCcEEEEECCC-CceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeE
Q 046451 191 STSYNGTTVVWDLKK-QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIA 269 (719)
Q Consensus 191 s~s~dg~I~iwd~~~-~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~ 269 (719)
+++.++.++||+++. ......+. .+...+.+++|+++++.+++++..++ .++||+++.....+..+..|...+.+
T Consensus 146 ~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~ 221 (297)
T 2ojh_A 146 CGIRDQVFDIYSMDIDSGVETRLT-HGEGRNDGPDYSPDGRWIYFNSSRTG---QMQIWRVRVDGSSVERITDSAYGDWF 221 (297)
T ss_dssp EEEETTEEEEEEEETTTCCEEECC-CSSSCEEEEEECTTSSEEEEEECTTS---SCEEEEEETTSSCEEECCCCSEEEEE
T ss_pred EECCCCceEEEEEECCCCcceEcc-cCCCccccceECCCCCEEEEEecCCC---CccEEEECCCCCCcEEEecCCcccCC
Confidence 888899999998643 22334444 57788999999999965555554565 78999886444567778888888999
Q ss_pred EEeCCCCCCeEEEEeCC-----------CcEEEEECCCCeE--EEEecCCCCCeEEeEEcCCCCCEEEEEeCC
Q 046451 270 MSWCPNDSSYLLTCAKD-----------NRTICWDTVSGEI--VSELPAGTNWNFDIHWYPKIPGVISASSFD 329 (719)
Q Consensus 270 v~~sp~d~~~l~sgs~D-----------g~I~iwd~~~~~~--~~~l~~h~~~v~~l~~spdg~~~las~s~D 329 (719)
++|++ ++++|++++.+ +.|++||+.+++. +..+.+|...+.+++|++++ ..|++++.|
T Consensus 222 ~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~ 292 (297)
T 2ojh_A 222 PHPSP-SGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDG-DEFAYVRYF 292 (297)
T ss_dssp EEECT-TSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTS-SEEEEEEEC
T ss_pred eEECC-CCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCC-CEEEEEEec
Confidence 99999 88988888765 5699999988765 44455788889999999999 555555544
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=3.4e-21 Score=202.58 Aligned_cols=274 Identities=11% Similarity=0.071 Sum_probs=195.4
Q ss_pred CeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCC---CceeeeecCCCCCCCCCccceEEEEcCCCcE
Q 046451 20 PYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSE---RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSI 96 (719)
Q Consensus 20 ~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~---~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I 96 (719)
++|++++.++.| .+||+..++....+ .... .+.+++|++++. .+++++..++.|
T Consensus 2 ~~~v~~~~~~~v----------~~~d~~~~~~~~~~------~~~~~~~~~~~~~~s~dg~-------~l~v~~~~~~~v 58 (337)
T 1pby_B 2 DYILAPARPDKL----------VVIDTEKMAVDKVI------TIADAGPTPMVPMVAPGGR-------IAYATVNKSESL 58 (337)
T ss_dssp EEEEEEETTTEE----------EEEETTTTEEEEEE------ECTTCTTCCCCEEECTTSS-------EEEEEETTTTEE
T ss_pred cEEEEcCCCCeE----------EEEECCCCcEEEEE------EcCCCCCCccceEEcCCCC-------EEEEEeCCCCeE
Confidence 478888777766 78887654332221 2223 578999999983 455677778999
Q ss_pred EEEcCCccccCCCCCCCCceeeecc-----ccCCEEEEEEeCCCCCEEEEEe------------CCCcEEEEcCCCCCCC
Q 046451 97 DIWNPLSLISSGETGGNPLIAHLSR-----HKGPVRGLEFNSFTPNLLASGA------------DDGEICIWDLSAPAEP 159 (719)
Q Consensus 97 ~lwd~~~~~~~~~~~~~~~~~~l~~-----h~~~V~~l~fsp~~~~~lasgs------------~dg~I~iwdl~~~~~~ 159 (719)
.+||+ .++ +.+..+.. |...+.+++|++ ++++|++++ .++.|.+||+.+.+..
T Consensus 59 ~~~d~------~~~---~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 59 VKIDL------VTG---ETLGRIDLSTPEERVKSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp EEEET------TTC---CEEEEEECCBTTEEEECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred EEEEC------CCC---CeEeeEEcCCcccccccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 99998 344 44444432 123677899999 788888876 5799999999876654
Q ss_pred CccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCC
Q 046451 160 SHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDE 239 (719)
Q Consensus 160 ~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d 239 (719)
..+ .. ...+.+++|++++. +|+++ ++.|++||+.+++.+..+.... ....+.|++++..+++++..+
T Consensus 129 ~~~---~~-----~~~~~~~~~s~dg~-~l~~~--~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~ 195 (337)
T 1pby_B 129 KAF---EA-----PRQITMLAWARDGS-KLYGL--GRDLHVMDPEAGTLVEDKPIQS--WEAETYAQPDVLAVWNQHESS 195 (337)
T ss_dssp EEE---EC-----CSSCCCEEECTTSS-CEEEE--SSSEEEEETTTTEEEEEECSTT--TTTTTBCCCBCCCCCCCCTTT
T ss_pred EEE---eC-----CCCcceeEECCCCC-EEEEe--CCeEEEEECCCCcEeeeeeccc--cCCCceeCCCccEEeeeccCC
Confidence 332 11 23577899999985 45555 6899999999998887776322 112347899987554444333
Q ss_pred CCC--------------------CcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE
Q 046451 240 DSS--------------------PALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI 299 (719)
Q Consensus 240 ~~~--------------------~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~ 299 (719)
+.. ..|.+||+++.......+..+...+.+++|++ ++++|+++ ++.|++||+.+++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~ 272 (337)
T 1pby_B 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNAS 272 (337)
T ss_dssp TEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEE
T ss_pred CceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECC-CCCEEEEe--CCeEEEEECCCCcC
Confidence 200 03689999876433344556667888999999 88888888 79999999999998
Q ss_pred EEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 300 VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 300 ~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+..+..+ ..+.+++|++++ .+|++++.|+.|++||+.+++.+.
T Consensus 273 ~~~~~~~-~~~~~~~~s~dg-~~l~~~~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 273 IKRVPLP-HSYYSVNVSTDG-STVWLGGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp EEEEECS-SCCCEEEECTTS-CEEEEESBSSEEEEEETTTCCEEE
T ss_pred cceecCC-CceeeEEECCCC-CEEEEEcCCCcEEEEECcCCcEEE
Confidence 8887654 358899999999 677777889999999999987755
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=3e-20 Score=195.62 Aligned_cols=269 Identities=10% Similarity=0.031 Sum_probs=190.8
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC-CCcEEEEcCCCCCC-CCcc
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD-DGEICIWDLSAPAE-PSHF 162 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~-dg~I~iwdl~~~~~-~~~~ 162 (719)
.++++++.++.|.+||+ .++ +.+..+..+...+ +++|++ ++++|++++. ++.|++||+.+++. ...
T Consensus 11 ~~~v~~~~~~~v~~~d~------~~~---~~~~~~~~~~~~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~- 78 (331)
T 3u4y_A 11 FGIVVEQHLRRISFFST------DTL---EILNQITLGYDFV-DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVA- 78 (331)
T ss_dssp EEEEEEGGGTEEEEEET------TTC---CEEEEEECCCCEE-EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEEEE-
T ss_pred EEEEEecCCCeEEEEeC------ccc---ceeeeEEccCCcc-eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEe-
Confidence 67888899999999998 445 5666666666667 999999 6775555554 89999999988765 322
Q ss_pred CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC---cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCC
Q 046451 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG---TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDE 239 (719)
Q Consensus 163 ~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg---~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d 239 (719)
+. .+...+.+++|+++|. +|+++..++ .|++||+.+++.+..+. ......+++|+++|+.++++...+
T Consensus 79 --~~----~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~ 149 (331)
T 3u4y_A 79 --IQ----EGQSSMADVDITPDDQ-FAVTVTGLNHPFNMQSYSFLKNKFISTIP--IPYDAVGIAISPNGNGLILIDRSS 149 (331)
T ss_dssp --EE----ECSSCCCCEEECTTSS-EEEECCCSSSSCEEEEEETTTTEEEEEEE--CCTTEEEEEECTTSSCEEEEEETT
T ss_pred --cc----cCCCCccceEECCCCC-EEEEecCCCCcccEEEEECCCCCeEEEEE--CCCCccceEECCCCCEEEEEecCC
Confidence 11 1223344499999985 666555553 89999999999888776 455679999999998777777766
Q ss_pred CCCCc-EEEEecCCCCCce---EEeeCCCCCeeEEEeCCCCCCeEE-EEeCCCcEEEEECCCCeE---EEEecCCCCCeE
Q 046451 240 DSSPA-LRLWDMRNTMSPV---KEFVGHTKGVIAMSWCPNDSSYLL-TCAKDNRTICWDTVSGEI---VSELPAGTNWNF 311 (719)
Q Consensus 240 ~~~~~-I~lwDl~~~~~~~---~~~~~h~~~V~~v~~sp~d~~~l~-sgs~Dg~I~iwd~~~~~~---~~~l~~h~~~v~ 311 (719)
+ . |.+|++....... ............++|++ ++++|+ ++..++.|++||+.+++. +..+..+ ..+.
T Consensus 150 ~---~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~ 224 (331)
T 3u4y_A 150 A---NTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP-DGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPG 224 (331)
T ss_dssp T---TEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT-TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCC
T ss_pred C---ceEEEEEECCCCcEeecCCccccCCCCccceEECC-CCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCc
Confidence 6 7 9999997643322 12223445689999999 887554 455789999999999887 7777655 5588
Q ss_pred EeEEcCCCCCEEEEEeCCCcEEEEeCCCCccccc--CCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCC
Q 046451 312 DIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGV--GDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 312 ~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~--~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
+++|++||..++++...++.|.+||+.+++.... ....+. ..+.+......++|+.||+.+.+...+.
T Consensus 225 ~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~spdg~~l~v~~~~~ 294 (331)
T 3u4y_A 225 TIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLL----IDPRPLFGANQMALNKTETKLFISANIS 294 (331)
T ss_dssp CEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCC----CCCGGGTTCCCEEECTTSSEEEEEETTT
T ss_pred eEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccc----cCCCCcccccceEECCCCCEEEEecCCC
Confidence 9999999954556666688999999999877221 111110 1112222224578999999877665544
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.87 E-value=1.7e-20 Score=228.96 Aligned_cols=348 Identities=8% Similarity=0.004 Sum_probs=234.3
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCc-------eeeeecCCCCC
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERF-------NRLAWGKNGSG 78 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V-------~~l~~sp~g~~ 78 (719)
|...+.+++|||||++||+++.++.- ..+..|.+|++..+.. .....|...+ .+++|++||
T Consensus 51 ~~~~v~~~~~SPDG~~la~~s~~~~~----~~~~~i~~~d~~~g~~------~~lt~~~~~~~~~~~~~~~~~~SpDg-- 118 (1045)
T 1k32_A 51 NLGVINNARFFPDGRKIAIRVMRGSS----LNTADLYFYNGENGEI------KRITYFSGKSTGRRMFTDVAGFDPDG-- 118 (1045)
T ss_dssp SSSEEEEEEECTTSSEEEEEEEESTT----CCEEEEEEEETTTTEE------EECCCCCEEEETTEECSEEEEECTTC--
T ss_pred CCCcccCeEECCCCCEEEEEEeeccC----CCCCeEEEEECCCCCe------EEcccCCCcccccccccccccCCCCC--
Confidence 45678999999999999988654100 0123568888765431 1223456666 899999998
Q ss_pred CCCCccceEEEEcCC------CcEEEEcCCccccC--CCCC-----------------------------C---------
Q 046451 79 SEDFSLGLVAGGLVD------GSIDIWNPLSLISS--GETG-----------------------------G--------- 112 (719)
Q Consensus 79 ~~~~~~~~lasgs~d------g~I~lwd~~~~~~~--~~~~-----------------------------~--------- 112 (719)
+++++++.+ ..|++|++...... .... .
T Consensus 119 ------~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~ 192 (1045)
T 1k32_A 119 ------NLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVN 192 (1045)
T ss_dssp ------CEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEE
T ss_pred ------EEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECC
Confidence 677777754 35777776432110 0000 0
Q ss_pred CCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCC-CCCccCCccCCCCCCCCCeEEEEecCCCCcEEEE
Q 046451 113 NPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPA-EPSHFPPLRGNGSAAQGEISFVSWNSKVQHILAS 191 (719)
Q Consensus 113 ~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~-~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s 191 (719)
......+.+|...+.++.|++ + .++++++.|+.+.||++.... .... +. .|. .+..++|+++|. .|+.
T Consensus 193 ~~~~~~l~~~~~~v~~~~~s~-d-~l~~~~~~dg~~~l~~~~~~g~~~~~---l~----~~~-~~~~~~~SpDG~-~la~ 261 (1045)
T 1k32_A 193 SGAFKKIVDMSTHVSSPVIVG-H-RIYFITDIDGFGQIYSTDLDGKDLRK---HT----SFT-DYYPRHLNTDGR-RILF 261 (1045)
T ss_dssp TTEEEEEECCSSCCEEEEEET-T-EEEEEECTTSSCEEEEEETTSCSCEE---CC----CCC-SSCEEEEEESSS-CEEE
T ss_pred CCCeEECcCCCCcccceEEeC-C-EEEEEEeccCceEEEEEeCCCCcceE---ec----CCC-CcceeeEcCCCC-EEEE
Confidence 011234467888999999988 4 677788889999999876422 2222 11 122 456779999985 5555
Q ss_pred EeCCCcEEEEECCCCceeEEecCC----------CCCceeEEEEC-CCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEe
Q 046451 192 TSYNGTTVVWDLKKQKPVISFSES----------IKRRCSVLQWN-PDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF 260 (719)
Q Consensus 192 ~s~dg~I~iwd~~~~~~~~~~~~~----------~~~~i~~l~~s-p~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~ 260 (719)
+ .++.|++||+... .+..+... +...+.+++|+ |||+. +++++ ++ .|++||+... ....+
T Consensus 262 ~-~~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~-la~~~-~~---~i~~~~~~~~--~~~~~ 332 (1045)
T 1k32_A 262 S-KGGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDL-IAFVS-RG---QAFIQDVSGT--YVLKV 332 (1045)
T ss_dssp E-ETTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGC-EEEEE-TT---EEEEECTTSS--BEEEC
T ss_pred E-eCCEEEEecCCce-EeeeeccCcccccccccccccccceeeecCCCCCE-EEEEE-cC---EEEEEcCCCC--ceEEc
Confidence 5 4899999999544 33344411 23468999999 99964 55555 44 7999998754 24456
Q ss_pred eCCCC-CeeEEEeCCCCCCeEEEEeCCCcEE-EEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 261 VGHTK-GVIAMSWCPNDSSYLLTCAKDNRTI-CWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 261 ~~h~~-~V~~v~~sp~d~~~l~sgs~Dg~I~-iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
..|.. .+..++|+ |++.|++++.++.|. +||+.+++... +..|...+..++|+||| .+|++++.++.|++||+.
T Consensus 333 ~~~~~~~~~~~~~s--dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG-~~la~~~~~~~v~~~d~~ 408 (1045)
T 1k32_A 333 PEPLRIRYVRRGGD--TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLE 408 (1045)
T ss_dssp SCCSCEEEEEECSS--SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETT
T ss_pred cCCCcceEEeeeEc--CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCC-CEEEEECCCCeEEEEECC
Confidence 67777 89999999 778888888888898 99998776554 44787889999999999 789999999999999999
Q ss_pred CCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEcc--------------------CCCCCcccccccccccee
Q 046451 339 GCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHP--------------------KSSAGHTSENSQHAPVHG 398 (719)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~--------------------~~~~~~~~~~~~~~~v~~ 398 (719)
+++......... ..+ ..++|++||+.+++.. .++. .+.+..|...+.+
T Consensus 409 tg~~~~~~~~~~--~~v---------~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~ 476 (1045)
T 1k32_A 409 TGKPTVIERSRE--AMI---------TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYA 476 (1045)
T ss_dssp TCCEEEEEECSS--SCC---------CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEE
T ss_pred CCceEEeccCCC--CCc---------cceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCC
Confidence 987755331111 111 2345555555544443 3222 3445677777888
Q ss_pred eccCCCCCC
Q 046451 399 VDQSKYGMV 407 (719)
Q Consensus 399 v~~s~~~~~ 407 (719)
+++|+||..
T Consensus 477 ~~~spdG~~ 485 (1045)
T 1k32_A 477 PAFDADSKN 485 (1045)
T ss_dssp EEECTTSCE
T ss_pred ceEcCCCCE
Confidence 999999875
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=2.6e-20 Score=197.58 Aligned_cols=281 Identities=12% Similarity=0.097 Sum_probs=199.9
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcC-------CCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCC
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLV-------DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTP 136 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~-------dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~ 136 (719)
...+..++|++++ ++|++++. ++.|.+||. .++ +.+..+.. ...+.+++|++ ++
T Consensus 40 ~~~~~~~~~s~dg--------~~l~~~~~~~~~~~~~~~v~~~d~------~~~---~~~~~~~~-~~~~~~~~~s~-dg 100 (353)
T 3vgz_A 40 GKGAYEMAYSQQE--------NALWLATSQSRKLDKGGVVYRLDP------VTL---EVTQAIHN-DLKPFGATINN-TT 100 (353)
T ss_dssp ESSEEEEEEETTT--------TEEEEEECCCTTTEESEEEEEECT------TTC---CEEEEEEE-SSCCCSEEEET-TT
T ss_pred ccCccceEECCCC--------CEEEEEcCCCcCCCCCccEEEEcC------CCC---eEEEEEec-CCCcceEEECC-CC
Confidence 4567899999998 56666553 568999998 444 55555543 34578999999 66
Q ss_pred C-EEEEEeCCCcEEEEcCCCCCCCCccCCccCCC--CCCCCCeEEEEecCCCCcEEEEE-eCCCcEEEEECCCCceeEEe
Q 046451 137 N-LLASGADDGEICIWDLSAPAEPSHFPPLRGNG--SAAQGEISFVSWNSKVQHILAST-SYNGTTVVWDLKKQKPVISF 212 (719)
Q Consensus 137 ~-~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~--~~h~~~I~~l~~sp~g~~~l~s~-s~dg~I~iwd~~~~~~~~~~ 212 (719)
+ ++++...++.|.+||+.+++....+..-.... ......+.+++|++++..+++++ +.++.|.+||+++++.+..+
T Consensus 101 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~ 180 (353)
T 3vgz_A 101 QTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI 180 (353)
T ss_dssp TEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred CEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe
Confidence 6 55566668999999999887654431100000 00011378899999986444444 35789999999999988877
Q ss_pred cCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC----CCCCeeEEEeCCCCCCeEEEEe-CCC
Q 046451 213 SESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG----HTKGVIAMSWCPNDSSYLLTCA-KDN 287 (719)
Q Consensus 213 ~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~----h~~~V~~v~~sp~d~~~l~sgs-~Dg 287 (719)
. .+...+.+++|+++++ .++++..++ .|.+||+.+. +.+..+.. +...+.+++|++ ++++|++++ .++
T Consensus 181 ~-~~~~~~~~~~~s~dg~-~l~~~~~~~---~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~ 253 (353)
T 3vgz_A 181 Q-NTGKMSTGLALDSEGK-RLYTTNADG---ELITIDTADN-KILSRKKLLDDGKEHFFINISLDT-ARQRAFITDSKAA 253 (353)
T ss_dssp C-CCCTTCCCCEEETTTT-EEEEECTTS---EEEEEETTTT-EEEEEEECCCSSSCCCEEEEEEET-TTTEEEEEESSSS
T ss_pred c-CCCCccceEEECCCCC-EEEEEcCCC---eEEEEECCCC-eEEEEEEcCCCCCCcccceEEECC-CCCEEEEEeCCCC
Confidence 6 4555688999999996 455666665 8999999875 44444443 455688899999 777666655 459
Q ss_pred cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCce
Q 046451 288 RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGA 367 (719)
Q Consensus 288 ~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~ 367 (719)
.|.+||+.+++.+..+..+.. ..++|++++..++++...++.|.+||+.+++....... . ..+.++
T Consensus 254 ~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~---------~---~~~~~~ 319 (353)
T 3vgz_A 254 EVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT---------P---THPNSL 319 (353)
T ss_dssp EEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC---------C---SEEEEE
T ss_pred EEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec---------C---CCCCeE
Confidence 999999999998888875443 57999999955666666799999999999887652211 1 123568
Q ss_pred eeeeCCcEEEEccCCCC
Q 046451 368 SFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 368 s~s~~Gklv~~~~~~~~ 384 (719)
+|+.||+.+.+...+..
T Consensus 320 ~~s~dg~~l~v~~~~~~ 336 (353)
T 3vgz_A 320 ALSADGKTLYVSVKQKS 336 (353)
T ss_dssp EECTTSCEEEEEEECCC
T ss_pred EEcCCCCEEEEEEcccc
Confidence 99999997777665543
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=9.8e-21 Score=194.53 Aligned_cols=259 Identities=11% Similarity=0.105 Sum_probs=184.6
Q ss_pred EEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCC-CCCCCccCCccC
Q 046451 89 GGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-PAEPSHFPPLRG 167 (719)
Q Consensus 89 sgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~-~~~~~~~~~l~~ 167 (719)
.++.|+.|++||+. ++ ....+..|...|.+++|++ ++++|++++ ++.|++||+.+ ++.... ..
T Consensus 17 ~~~~~~~i~~~d~~------~~----~~~~~~~~~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~~~---~~- 80 (297)
T 2ojh_A 17 GGSMRSSIEIFNIR------TR----KMRVVWQTPELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPEKV---DT- 80 (297)
T ss_dssp -CCCCEEEEEEETT------TT----EEEEEEEESSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCEEC---CC-
T ss_pred CCCcceeEEEEeCC------CC----ceeeeccCCcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCceEe---cc-
Confidence 34578999999983 33 3445667899999999999 788888876 78999999988 654322 11
Q ss_pred CCCCCCCCeEEEEecCCCCcEEEEEe--CCC--cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC
Q 046451 168 NGSAAQGEISFVSWNSKVQHILASTS--YNG--TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 168 ~~~~h~~~I~~l~~sp~g~~~l~s~s--~dg--~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~ 243 (719)
..+...+.+++|++++ .+|++++ .++ .|.+||+.+++ ...+. ....+..++|+++++.+++++..++
T Consensus 81 --~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~--- 151 (297)
T 2ojh_A 81 --GFATICNNDHGISPDG-ALYAISDKVEFGKSAIYLLPSTGGT-PRLMT--KNLPSYWHGWSPDGKSFTYCGIRDQ--- 151 (297)
T ss_dssp --TTCCCBCSCCEECTTS-SEEEEEECTTTSSCEEEEEETTCCC-CEECC--SSSSEEEEEECTTSSEEEEEEEETT---
T ss_pred --ccccccccceEECCCC-CEEEEEEeCCCCcceEEEEECCCCc-eEEee--cCCCccceEECCCCCEEEEEECCCC---
Confidence 1123578899999998 4777777 334 45555555554 34444 3345889999999976666777776
Q ss_pred cEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe-CCCcEEEEECC-CCeEEEEecCCCCCeEEeEEcCCCCC
Q 046451 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA-KDNRTICWDTV-SGEIVSELPAGTNWNFDIHWYPKIPG 321 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~-~~~~~~~l~~h~~~v~~l~~spdg~~ 321 (719)
.++||+++........+..|...+.+++|++ ++++|++++ .++.++||++. .+..+..+..|...+..+.|++++ .
T Consensus 152 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~ 229 (297)
T 2ojh_A 152 VFDIYSMDIDSGVETRLTHGEGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSG-D 229 (297)
T ss_dssp EEEEEEEETTTCCEEECCCSSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTS-S
T ss_pred ceEEEEEECCCCcceEcccCCCccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCC-C
Confidence 7999997544445667777888999999999 888777665 58999999886 556677788888889999999999 5
Q ss_pred EEEEEeCC-----------CcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCC
Q 046451 322 VISASSFD-----------GKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 322 ~las~s~D-----------g~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
+|++++.+ +.|++||+.+++........-. ......++|++||+.+++..++.
T Consensus 230 ~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~---------~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 230 KVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGG---------QGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEES---------TTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCC---------CcccccceECCCCCEEEEEEecc
Confidence 66666654 5699999998765331110000 01124478899999887776543
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.87 E-value=2.3e-20 Score=218.01 Aligned_cols=289 Identities=17% Similarity=0.105 Sum_probs=197.3
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceE
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLV 87 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~l 87 (719)
..|.+++|||| ++|+++. ++ .+++||+..+.. .....+...+.+++|+||| +.|
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~----------~i~~~d~~~~~~------~~l~~~~~~~~~~~~SpdG--------~~l 135 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QG----------GLVGFDMLARKV------TYLFDTNEETASLDFSPVG--------DRV 135 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TT----------EEEEEETTTTEE------EEEECCTTCCTTCEECTTS--------SEE
T ss_pred cCceeEEECCC-CeEEEEE-CC----------EEEEEECCCCce------EEccCCcccccCCcCCCCC--------CEE
Confidence 45899999999 6666553 34 458899875422 1123356678999999998 677
Q ss_pred EEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCC--------------EEEEEEeCCCCCEEEEEe----------
Q 046451 88 AGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGP--------------VRGLEFNSFTPNLLASGA---------- 143 (719)
Q Consensus 88 asgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~--------------V~~l~fsp~~~~~lasgs---------- 143 (719)
+++ .|+.|++||+..... ..+ +.......+... +.++.|+| |+++|++++
T Consensus 136 a~~-~~~~i~v~~~~~~~~-~~g---~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~ 209 (706)
T 2z3z_A 136 AYV-RNHNLYIARGGKLGE-GMS---RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTP 209 (706)
T ss_dssp EEE-ETTEEEEEECBCTTS-CCC---CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEE
T ss_pred EEE-ECCeEEEEecCcccc-cCC---CcEEeccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEE
Confidence 775 689999999842000 003 333323333332 58999999 889998887
Q ss_pred -----------------------CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC----
Q 046451 144 -----------------------DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG---- 196 (719)
Q Consensus 144 -----------------------~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg---- 196 (719)
.+..|++||+.+++..... . ...+...+.+++|+++|. .|++++.++
T Consensus 210 ~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~---~--~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~ 283 (706)
T 2z3z_A 210 IVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQ---T--GEPKEKFLTNLSWSPDEN-ILYVAEVNRAQNE 283 (706)
T ss_dssp EEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECC---C--CSCTTCEEEEEEECTTSS-EEEEEEECTTSCE
T ss_pred eeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeec---c--CCCCceeEeeEEEECCCC-EEEEEEeCCCCCe
Confidence 4467999999876543221 1 123556799999999984 677766665
Q ss_pred -cEEEEECCCCceeEEec-CCCCC---ceeEEEECC--CCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeE
Q 046451 197 -TTVVWDLKKQKPVISFS-ESIKR---RCSVLQWNP--DVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIA 269 (719)
Q Consensus 197 -~I~iwd~~~~~~~~~~~-~~~~~---~i~~l~~sp--~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~ 269 (719)
.|++||+.+++....+. ..+.. .+..++|++ ||+ +++++..++ .++||++......+..+..|...+.+
T Consensus 284 ~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g---~~~l~~~~~~~~~~~~l~~~~~~v~~ 359 (706)
T 2z3z_A 284 CKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDG---WNHLYLYDTTGRLIRQVTKGEWEVTN 359 (706)
T ss_dssp EEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE-EEEEECTTS---SCEEEEEETTSCEEEECCCSSSCEEE
T ss_pred eEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE-EEEEEccCC---ccEEEEEECCCCEEEecCCCCeEEEe
Confidence 89999999984333332 11222 246789999 985 677777666 78888876334567777778778877
Q ss_pred -EEeCCCCCCeEEEEe-CCC----cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCC---CcEEEEeCCCC
Q 046451 270 -MSWCPNDSSYLLTCA-KDN----RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFD---GKIGIYNIEGC 340 (719)
Q Consensus 270 -v~~sp~d~~~l~sgs-~Dg----~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~D---g~I~iwd~~~~ 340 (719)
++|++ +++.|+.++ .++ .|..||+.+++ +..+. +...+.+++|++||..++++++.+ +.|++||+.++
T Consensus 360 ~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 360 FAGFDP-KGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp EEEECT-TSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred eeEEcC-CCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 79999 777665554 444 67777887766 34443 566799999999995444444443 56999999987
Q ss_pred c
Q 046451 341 S 341 (719)
Q Consensus 341 ~ 341 (719)
+
T Consensus 437 ~ 437 (706)
T 2z3z_A 437 S 437 (706)
T ss_dssp E
T ss_pred e
Confidence 6
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.87 E-value=3.8e-20 Score=225.74 Aligned_cols=278 Identities=12% Similarity=0.065 Sum_probs=208.9
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
+...+.++.|++| .++++++.+|.+ +||+++....... .+ ..+ ..+..++|+++| +
T Consensus 202 ~~~~v~~~~~s~d-~l~~~~~~dg~~----------~l~~~~~~g~~~~--~l--~~~-~~~~~~~~SpDG--------~ 257 (1045)
T 1k32_A 202 MSTHVSSPVIVGH-RIYFITDIDGFG----------QIYSTDLDGKDLR--KH--TSF-TDYYPRHLNTDG--------R 257 (1045)
T ss_dssp CSSCCEEEEEETT-EEEEEECTTSSC----------EEEEEETTSCSCE--EC--CCC-CSSCEEEEEESS--------S
T ss_pred CCCcccceEEeCC-EEEEEEeccCce----------EEEEEeCCCCcce--Ee--cCC-CCcceeeEcCCC--------C
Confidence 4567889999988 666677666654 7888775332111 11 122 346788999998 6
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc-----------ccCCEEEEEEe-CCCCCEEEEEeCCCcEEEEcC
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR-----------HKGPVRGLEFN-SFTPNLLASGADDGEICIWDL 153 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~-----------h~~~V~~l~fs-p~~~~~lasgs~dg~I~iwdl 153 (719)
.|+.+ .++.|++||+.. ..+..+.. |...+.+++|+ | ++++|++++ ++.|++|++
T Consensus 258 ~la~~-~~~~i~~~d~~~----------~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~ 324 (1045)
T 1k32_A 258 RILFS-KGGSIYIFNPDT----------EKIEKIEIGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDV 324 (1045)
T ss_dssp CEEEE-ETTEEEEECTTT----------CCEEECCCCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECT
T ss_pred EEEEE-eCCEEEEecCCc----------eEeeeeccCcccccccccccccccceeeecCC-CCCEEEEEE-cCEEEEEcC
Confidence 77777 489999999821 22223333 45578999999 9 788888877 789999998
Q ss_pred CCCCCCCccCCccCCCCCCCC-CeEEEEecCCCCcEEEEEeCCCcEE-EEECCCCceeEEecCCCCCceeEEEECCCCCc
Q 046451 154 SAPAEPSHFPPLRGNGSAAQG-EISFVSWNSKVQHILASTSYNGTTV-VWDLKKQKPVISFSESIKRRCSVLQWNPDVAT 231 (719)
Q Consensus 154 ~~~~~~~~~~~l~~~~~~h~~-~I~~l~~sp~g~~~l~s~s~dg~I~-iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~ 231 (719)
.++.... ...+.. .+.+++|+ +| ..|++++.++.+. +||+.+++.. .+. .+...+..++|+|||+
T Consensus 325 ~~~~~~~--------~~~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~~~d~~~~~~~-~l~-~~~~~~~~~~~SpDG~- 391 (1045)
T 1k32_A 325 SGTYVLK--------VPEPLRIRYVRRGGD-TK-VAFIHGTREGDFLGIYDYRTGKAE-KFE-ENLGNVFAMGVDRNGK- 391 (1045)
T ss_dssp TSSBEEE--------CSCCSCEEEEEECSS-SE-EEEEEEETTEEEEEEEETTTCCEE-ECC-CCCCSEEEEEECTTSS-
T ss_pred CCCceEE--------ccCCCcceEEeeeEc-CC-CeEEEEECCCceEEEEECCCCCce-Eec-CCccceeeeEECCCCC-
Confidence 8654221 123455 78999999 86 5777777788888 9999876643 444 5778899999999995
Q ss_pred EEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCC----------cEEEEECCCCeEEE
Q 046451 232 QLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDN----------RTICWDTVSGEIVS 301 (719)
Q Consensus 232 ~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg----------~I~iwd~~~~~~~~ 301 (719)
.|++++.++ .|++||+.++ +....+.+|...+.+++|+| |+++|++++.++ .|++||+.+++ +.
T Consensus 392 ~la~~~~~~---~v~~~d~~tg-~~~~~~~~~~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~ 465 (1045)
T 1k32_A 392 FAVVANDRF---EIMTVDLETG-KPTVIERSREAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IF 465 (1045)
T ss_dssp EEEEEETTS---EEEEEETTTC-CEEEEEECSSSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EE
T ss_pred EEEEECCCC---eEEEEECCCC-ceEEeccCCCCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEECCCCc-EE
Confidence 677777776 8999999865 55555668989999999999 999998887654 89999999887 67
Q ss_pred EecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 046451 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 302 ~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~ 340 (719)
.+..|...+..++|++|| ..|++++.++...+|+....
T Consensus 466 ~l~~~~~~~~~~~~spdG-~~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 466 AATTENSHDYAPAFDADS-KNLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp ECSCSSSBEEEEEECTTS-CEEEEEESCCCCCEECSSSS
T ss_pred EeeCCCcccCCceEcCCC-CEEEEEecccCCcCcchhcc
Confidence 777888889999999999 68888888888888876543
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=2.2e-20 Score=219.52 Aligned_cols=285 Identities=11% Similarity=0.049 Sum_probs=201.1
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccC--CcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQS--EDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~--~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
.|.+++|||||++|++++. +.|.+||++.+. ... ....+...+.+++|+||| ++
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-----------~~i~~~d~~~~~~~~~~-----~l~~~~~~~~~~~~SPDG--------~~ 165 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-----------GELYLYDLKQEGKAAVR-----QLTHGEGFATDAKLSPKG--------GF 165 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-----------TEEEEEESSSCSTTSCC-----BCCCSSSCEEEEEECTTS--------SE
T ss_pred CcceeEECCCCCEEEEEeC-----------CcEEEEECCCCCcceEE-----EcccCCcccccccCCCCC--------CE
Confidence 4889999999999999864 455899988652 111 123466789999999998 67
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccC----------------CEEEEEEeCCCCCEEEEEeCCC----
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKG----------------PVRGLEFNSFTPNLLASGADDG---- 146 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~----------------~V~~l~fsp~~~~~lasgs~dg---- 146 (719)
|+.++ ++.|++||+. ++ ........+.. .+.+++|+| |+++|++++.|+
T Consensus 166 la~~~-~~~i~~~d~~------~g---~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~ 234 (741)
T 2ecf_A 166 VSFIR-GRNLWVIDLA------SG---RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVP 234 (741)
T ss_dssp EEEEE-TTEEEEEETT------TT---EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSC
T ss_pred EEEEe-CCcEEEEecC------CC---CEEEeccCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCc
Confidence 88876 5699999984 22 32222222322 247899999 788888887765
Q ss_pred -----------------------------cEEEEcCCC-CCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe---
Q 046451 147 -----------------------------EICIWDLSA-PAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS--- 193 (719)
Q Consensus 147 -----------------------------~I~iwdl~~-~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s--- 193 (719)
.|++||+.+ ++..... . ...+...+..++| ++|. .|++++
T Consensus 235 ~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~---~--~~~~~~~~~~~~~-pDg~-~l~~~~~~~ 307 (741)
T 2ecf_A 235 VQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWID---L--GKEQDIYLARVNW-RDPQ-HLSFQRQSR 307 (741)
T ss_dssp EEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEEC---C--CSCSSEEEEEEEE-EETT-EEEEEEEET
T ss_pred eEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEec---C--CCCcceEEEEEEe-CCCC-EEEEEEecc
Confidence 789999987 6543221 1 1135668999999 9985 555443
Q ss_pred --CCCcEEEEECCCCceeEEecCCCCC---ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCee
Q 046451 194 --YNGTTVVWDLKKQKPVISFSESIKR---RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVI 268 (719)
Q Consensus 194 --~dg~I~iwd~~~~~~~~~~~~~~~~---~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~ 268 (719)
.+..|++||+.+++....+...... .+..++|++||+ +++++..++ .++||.+..... ...+..|...|.
T Consensus 308 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g---~~~l~~~~~~~~-~~~l~~~~~~v~ 382 (741)
T 2ecf_A 308 DQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTG---FQHLYRIDSKGK-AAALTHGNWSVD 382 (741)
T ss_dssp TSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTS---SCEEEEECSSSC-EEESCCSSSCEE
T ss_pred cCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCC---ccEEEEEcCCCC-eeeeeecceEEE
Confidence 3568999999999877666522222 456899999996 777777766 677776653334 777888888888
Q ss_pred EE-EeCCCCCCeEE-EEeCCC--cEEEEECCC-CeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCC---CcEEEEeCCCC
Q 046451 269 AM-SWCPNDSSYLL-TCAKDN--RTICWDTVS-GEIVSELPAGTNWNFDIHWYPKIPGVISASSFD---GKIGIYNIEGC 340 (719)
Q Consensus 269 ~v-~~sp~d~~~l~-sgs~Dg--~I~iwd~~~-~~~~~~l~~h~~~v~~l~~spdg~~~las~s~D---g~I~iwd~~~~ 340 (719)
++ .|++ +++.|+ +++.++ .++||++.. ++.+..+.. ...+.+++|++||..++++++.. ..+.+|+..++
T Consensus 383 ~~~~~s~-dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 383 ELLAVDE-KAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp EEEEEET-TTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred eEeEEeC-CCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 87 5999 777665 555555 899998864 555666665 55689999999995555555443 47899998765
Q ss_pred cc
Q 046451 341 SR 342 (719)
Q Consensus 341 ~~ 342 (719)
..
T Consensus 461 ~~ 462 (741)
T 2ecf_A 461 KI 462 (741)
T ss_dssp EE
T ss_pred eE
Confidence 44
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=2.5e-20 Score=218.29 Aligned_cols=302 Identities=12% Similarity=0.131 Sum_probs=201.7
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccC---CEEEEEEeCCCCCEEEE
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKG---PVRGLEFNSFTPNLLAS 141 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~---~V~~l~fsp~~~~~las 141 (719)
..+.+++|++|| +++++ +.||.|++||+ .++ +....+..|.. .|.+++|+| |+++|++
T Consensus 17 ~~~~~~~~spdg--------~~~~~-~~dg~i~~~d~------~~g---~~~~~~~~~~~~~~~v~~~~~Sp-Dg~~l~~ 77 (723)
T 1xfd_A 17 IHDPEAKWISDT--------EFIYR-EQKGTVRLWNV------ETN---TSTVLIEGKKIESLRAIRYEISP-DREYALF 77 (723)
T ss_dssp CCCCCCCBSSSS--------CBCCC-CSSSCEEEBCG------GGC---CCEEEECTTTTTTTTCSEEEECT-TSSEEEE
T ss_pred ccccccEEcCCC--------cEEEE-eCCCCEEEEEC------CCC---cEEEEeccccccccccceEEECC-CCCEEEE
Confidence 457789999998 56665 78999999998 444 55556666654 499999999 8899999
Q ss_pred EeCC---------CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEe
Q 046451 142 GADD---------GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF 212 (719)
Q Consensus 142 gs~d---------g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~ 212 (719)
++.+ +.|++||+.+++. ..+ . ....+...+..++|+|+|. .|+.++. +.|++||+.+++.....
T Consensus 78 ~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l---~-~~~~~~~~~~~~~~SPdG~-~la~~~~-~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 78 SYNVEPIYQHSYTGYYVLSKIPHGDP-QSL---D-PPEVSNAKLQYAGWGPKGQ-QLIFIFE-NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp EESCCCCSSSCCCSEEEEEESSSCCC-EEC---C-CTTCCSCCCSBCCBCSSTT-CEEEEET-TEEEEESSSSSCCEEEE
T ss_pred EecCccceeecceeeEEEEECCCCce-Eec---c-CCccccccccccEECCCCC-EEEEEEC-CeEEEEECCCCceEEEe
Confidence 8774 7888999998765 221 1 1223455688999999985 6666665 79999999988776555
Q ss_pred cCCCCC------------------ceeEEEECCCCCcEEEEEeCCCC-------------------------------CC
Q 046451 213 SESIKR------------------RCSVLQWNPDVATQLVVASDEDS-------------------------------SP 243 (719)
Q Consensus 213 ~~~~~~------------------~i~~l~~sp~g~~~l~~~s~d~~-------------------------------~~ 243 (719)
. .+.. .+.+++|+|||+. |++++.++. ..
T Consensus 151 ~-~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~-la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 228 (723)
T 1xfd_A 151 S-TGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTR-LAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSI 228 (723)
T ss_dssp C-CCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSE-EEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEE
T ss_pred c-CCCCCceECcccceeEEEEeccCcceEEECCCCCE-EEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCee
Confidence 4 2222 2378999999964 555443320 12
Q ss_pred cEEEEecCCCCCceEEeeCC------CCCeeEEEeCCCCCCeEEEEeC----CCcEEEEECCCCeEEEEecC-CCCCeE-
Q 046451 244 ALRLWDMRNTMSPVKEFVGH------TKGVIAMSWCPNDSSYLLTCAK----DNRTICWDTVSGEIVSELPA-GTNWNF- 311 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h------~~~V~~v~~sp~d~~~l~sgs~----Dg~I~iwd~~~~~~~~~l~~-h~~~v~- 311 (719)
.|++||+.+. +....+..+ ...+.+++|+| |+++|++.+. +..|++||+.+++....+.. +..++.
T Consensus 229 ~l~~~d~~~~-~~~~~l~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 306 (723)
T 1xfd_A 229 SLHVIGLNGP-THDLEMMPPDDPRMREYYITMVKWAT-STKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHR 306 (723)
T ss_dssp EEEEEESSSS-CCCEECCCCCCGGGSSEEEEEEEESS-SSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCC
T ss_pred EEEEEECCCC-ceeEEeeCCccCCCccceeEEEEEeC-CCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEec
Confidence 6999999765 333455543 56789999999 8888877653 35799999999987766543 344443
Q ss_pred ---EeEEcCCCCCEEEE-EeCCC------cEEEEe-CCCCc---ccccCCCCCCCCCccCcceecCCCceeeeeCCcEEE
Q 046451 312 ---DIHWYPKIPGVISA-SSFDG------KIGIYN-IEGCS---RYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVS 377 (719)
Q Consensus 312 ---~l~~spdg~~~las-~s~Dg------~I~iwd-~~~~~---~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~ 377 (719)
.++|+|||..+++. +..|+ .|.+|| ..++. ........ |.. ...++|+.||+.++
T Consensus 307 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~----------~~~-~~~~~~spdg~~l~ 375 (723)
T 1xfd_A 307 QNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGD----------WDV-TKILAYDEKGNKIY 375 (723)
T ss_dssp CCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS----------SCE-EEEEEEETTTTEEE
T ss_pred cCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCC----------eEE-EeeeEEcCCCCEEE
Confidence 88999999655554 56677 567777 34444 22211111 110 01246777777776
Q ss_pred EccCCC---C------------Ccccccc---ccccceeeccCCCCCC
Q 046451 378 FHPKSS---A------------GHTSENS---QHAPVHGVDQSKYGMV 407 (719)
Q Consensus 378 ~~~~~~---~------------~~~~~~~---~~~~v~~v~~s~~~~~ 407 (719)
|...+. . ..+.+.. |...|.++++|+||..
T Consensus 376 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~ 423 (723)
T 1xfd_A 376 FLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDF 423 (723)
T ss_dssp EEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSE
T ss_pred EEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCE
Confidence 654432 1 0111222 5566778999999865
No 148
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.86 E-value=9.1e-20 Score=192.16 Aligned_cols=279 Identities=12% Similarity=0.143 Sum_probs=181.1
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.+...+.+++|+|||++|++++.+ ++.+.+|+++..... +...........+.+++|++++
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~---------~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~dg-------- 95 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRP---------EFRVLAYRIAPDDGA--LTFAAESALPGSLTHISTDHQG-------- 95 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETT---------TTEEEEEEECTTTCC--EEEEEEEECSSCCSEEEECTTS--------
T ss_pred ecCCCCceEEECCCCCEEEEeecC---------CCeEEEEEecCCCCc--eeeccccccCCCCcEEEEcCCC--------
Confidence 345678899999999999988764 234588998732211 1112222233478999999998
Q ss_pred ceEE-EEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEe-CCCcEEEEcCCCCCCCCcc
Q 046451 85 GLVA-GGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA-DDGEICIWDLSAPAEPSHF 162 (719)
Q Consensus 85 ~~la-sgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs-~dg~I~iwdl~~~~~~~~~ 162 (719)
++|+ ++..++.|.+||+. ++.....+..+.. ...+.+++|++ ++++|++++ .++.|++||+.+.......
T Consensus 96 ~~l~~~~~~~~~i~~~d~~------~~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 96 QFVFVGSYNAGNVSVTRLE------DGLPVGVVDVVEG-LDGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp SEEEEEETTTTEEEEEEEE------TTEEEEEEEEECC-CTTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred CEEEEEecCCCeEEEEECC------CCccccccccccC-CCCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeee
Confidence 5554 55568999999983 1100133333433 34688999999 777777776 8999999999873322211
Q ss_pred C--CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC--Cce--eEEecC---C--CCCceeEEEECCCCCc
Q 046451 163 P--PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK--QKP--VISFSE---S--IKRRCSVLQWNPDVAT 231 (719)
Q Consensus 163 ~--~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~--~~~--~~~~~~---~--~~~~i~~l~~sp~g~~ 231 (719)
. .+.. .....+.+++|++++..+++++..++.|.+||++. ++. ...+.. . ....+..++|+++++.
T Consensus 168 ~~~~~~~---~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~ 244 (343)
T 1ri6_A 168 DPAEVTT---VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH 244 (343)
T ss_dssp EEEEEEC---STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred ccccccc---CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCE
Confidence 0 0111 12347889999999864556666899999999954 332 222221 1 1235668999999976
Q ss_pred EEEEEeCCCCCCcEEEEecCCCC---CceEEeeCCCCCeeEEEeCCCCCCeEEEEe-CCCcEEEE--ECCCCe--EEEEe
Q 046451 232 QLVVASDEDSSPALRLWDMRNTM---SPVKEFVGHTKGVIAMSWCPNDSSYLLTCA-KDNRTICW--DTVSGE--IVSEL 303 (719)
Q Consensus 232 ~l~~~s~d~~~~~I~lwDl~~~~---~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iw--d~~~~~--~~~~l 303 (719)
+++++..++ .|++||++... +.+..+..+.. +.+++|++ ++++|++++ .++.|.+| |..+++ .+..+
T Consensus 245 l~v~~~~~~---~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~-dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 245 LYACDRTAS---LITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDH-SGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp EEEEETTTT---EEEEEEECTTSCCEEEEEEEECSSS-CCCEEECT-TSSEEEEECTTTCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEecCCC---EEEEEEEcCCCCceEEeeeecCCCc-cceEEECC-CCCEEEEecCCCCeEEEEEEcCCCceeeEcccc
Confidence 655665666 89999997321 23344444444 88999999 888888777 68999999 555664 34445
Q ss_pred cCCCCCeEEeEEcCCC
Q 046451 304 PAGTNWNFDIHWYPKI 319 (719)
Q Consensus 304 ~~h~~~v~~l~~spdg 319 (719)
... ....+++|.++.
T Consensus 320 ~~g-~~p~~i~~~~~~ 334 (343)
T 1ri6_A 320 AVG-QGPMWVVVNAHE 334 (343)
T ss_dssp ECS-SSCCEEEEEEEC
T ss_pred ccC-CCCeeEEEEccc
Confidence 443 346667777654
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=4.4e-20 Score=215.66 Aligned_cols=319 Identities=13% Similarity=0.098 Sum_probs=203.8
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCc-ccceeeccc------------CCCCCceeeeecCC
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSED-RDLLLVGES------------PSSERFNRLAWGKN 75 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~-~~~~~~~~~------------~~~~~V~~l~~sp~ 75 (719)
.+..+.|+ |+.+++++.+| | +||+.+++.. ..+.-.... .+...|.+++|++|
T Consensus 27 ~~~~~~w~--g~~~~~~~~~~-----------i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd 92 (706)
T 2z3z_A 27 YVVGLQWM--GDNYVFIEGDD-----------L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR 92 (706)
T ss_dssp -CTTCEEE--TTEEEEEETTE-----------E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT
T ss_pred cCCCCcCc--CCeEEEEeCCc-----------E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC
Confidence 46778888 55566664433 5 7777765541 111100000 01256999999999
Q ss_pred CCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCC
Q 046451 76 GSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA 155 (719)
Q Consensus 76 g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~ 155 (719)
+ .++++. ++.|++||+. ++ ....+..+...+.+++|+| |+++|+++ .|+.|++||+.+
T Consensus 93 ~--------~~~~~~--~~~i~~~d~~------~~----~~~~l~~~~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~ 150 (706)
T 2z3z_A 93 G--------LVVLFT--QGGLVGFDML------AR----KVTYLFDTNEETASLDFSP-VGDRVAYV-RNHNLYIARGGK 150 (706)
T ss_dssp T--------EEEEEE--TTEEEEEETT------TT----EEEEEECCTTCCTTCEECT-TSSEEEEE-ETTEEEEEECBC
T ss_pred C--------eEEEEE--CCEEEEEECC------CC----ceEEccCCcccccCCcCCC-CCCEEEEE-ECCeEEEEecCc
Confidence 4 455553 5999999983 32 3344555677899999999 78888885 679999999987
Q ss_pred -----CCCCCccCCccCCCC----------CCCCCeEEEEecCCCCcEEEEEe---------------------------
Q 046451 156 -----PAEPSHFPPLRGNGS----------AAQGEISFVSWNSKVQHILASTS--------------------------- 193 (719)
Q Consensus 156 -----~~~~~~~~~l~~~~~----------~h~~~I~~l~~sp~g~~~l~s~s--------------------------- 193 (719)
++..... ..... .+...+.++.|+|+|. +|++++
T Consensus 151 ~~~~~g~~~~~~---~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~ 226 (706)
T 2z3z_A 151 LGEGMSRAIAVT---IDGTETLVYGQAVHQREFGIEKGTFWSPKGS-CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYP 226 (706)
T ss_dssp TTSCCCCCEESC---SCCBTTEEESSCCGGGCTTCCCSEEECTTSS-EEEEEEEECTTSCCEEEEECCSSSCEEEEECCC
T ss_pred ccccCCCcEEec---cCCCCCeEcccchhhhhcCCCceEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCceEEeeCC
Confidence 5543221 11000 0011258899999985 677766
Q ss_pred ------CCCcEEEEECCCCceeEEecC-CCCCceeEEEECCCCCcEEEEEeCCC--CCCcEEEEecCCCCCceEEee--C
Q 046451 194 ------YNGTTVVWDLKKQKPVISFSE-SIKRRCSVLQWNPDVATQLVVASDED--SSPALRLWDMRNTMSPVKEFV--G 262 (719)
Q Consensus 194 ------~dg~I~iwd~~~~~~~~~~~~-~~~~~i~~l~~sp~g~~~l~~~s~d~--~~~~I~lwDl~~~~~~~~~~~--~ 262 (719)
.+..|++||+.+++....... .+...+.+++|+|||+. |++++.+. ....|++||+.++.. ...+. .
T Consensus 227 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~v~~~d~~~g~~-~~~~~~~~ 304 (706)
T 2z3z_A 227 MAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENI-LYVAEVNRAQNECKVNAYDAETGRF-VRTLFVET 304 (706)
T ss_dssp BTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSE-EEEEEECTTSCEEEEEEEETTTCCE-EEEEEEEE
T ss_pred CCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCE-EEEEEeCCCCCeeEEEEEECCCCce-eeEEEEcc
Confidence 446899999998876544321 35677899999999964 44444332 122799999987522 22222 2
Q ss_pred CCC---CeeEEEeCC-CCCCeEEEEeCCCcEEEEECC-CCeEEEEecCCCCCeEE-eEEcCCCCCEEEEEeCCC----cE
Q 046451 263 HTK---GVIAMSWCP-NDSSYLLTCAKDNRTICWDTV-SGEIVSELPAGTNWNFD-IHWYPKIPGVISASSFDG----KI 332 (719)
Q Consensus 263 h~~---~V~~v~~sp-~d~~~l~sgs~Dg~I~iwd~~-~~~~~~~l~~h~~~v~~-l~~spdg~~~las~s~Dg----~I 332 (719)
+.. .+.+++|++ .|+++|++++.|+.++||++. +++.+..+..+...+.+ ++|++++..++++++.++ .|
T Consensus 305 ~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l 384 (706)
T 2z3z_A 305 DKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHF 384 (706)
T ss_dssp CSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEE
T ss_pred CCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEE
Confidence 222 246789998 255688999999999999876 67777888887777877 799999955666666665 67
Q ss_pred EEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCC
Q 046451 333 GIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKS 382 (719)
Q Consensus 333 ~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~ 382 (719)
..||+.+++...... . .....++|++||+.+++...+
T Consensus 385 ~~~d~~~~~~~~l~~-~------------~~~~~~~~spdg~~l~~~~~~ 421 (706)
T 2z3z_A 385 YCIDIKGGKTKDLTP-E------------SGMHRTQLSPDGSAIIDIFQS 421 (706)
T ss_dssp EEEETTCCCCEESCC-S------------SSEEEEEECTTSSEEEEEEEC
T ss_pred EEEEcCCCCceeccC-C------------CceEEEEECCCCCEEEEEecC
Confidence 777777765433211 0 011347889999887776443
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=3.7e-19 Score=190.04 Aligned_cols=299 Identities=10% Similarity=0.073 Sum_probs=192.8
Q ss_pred EcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCC-
Q 046451 15 FAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVD- 93 (719)
Q Consensus 15 fSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~d- 93 (719)
..+...+|.+|+..+ ..++.|.+|+++..... +...... +......++|++++ ++|++++.+
T Consensus 9 ~~~~~~~~~vg~y~~------~~~~~i~~~~~d~~~g~--~~~~~~~-~~~~p~~l~~spdg--------~~l~~~~~~~ 71 (361)
T 3scy_A 9 TTDSELTMLVGTYTS------GNSKGIYTFRFNEETGE--SLPLSDA-EVANPSYLIPSADG--------KFVYSVNEFS 71 (361)
T ss_dssp GGGGEEEEEEEECCS------SSCCEEEEEEEETTTCC--EEEEEEE-ECSCCCSEEECTTS--------SEEEEEECCS
T ss_pred hCCCceEEEEEeccC------CCCCCEEEEEEeCCCCC--EEEeecc-cCCCCceEEECCCC--------CEEEEEEccC
Confidence 344456777887643 24567899998754332 2222223 67788899999998 678887775
Q ss_pred ---CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEe-CCCcEEEEcCCCCCCCCccCCccC-C
Q 046451 94 ---GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA-DDGEICIWDLSAPAEPSHFPPLRG-N 168 (719)
Q Consensus 94 ---g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs-~dg~I~iwdl~~~~~~~~~~~l~~-~ 168 (719)
+.|.+|+++. .++ ....+.....+......+++ ++++|++++ .++.|.+|++........+..... .
T Consensus 72 ~~~~~v~~~~~~~----~~g-~~~~~~~~~~~~~~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~ 143 (361)
T 3scy_A 72 KDQAAVSAFAFDK----EKG-TLHLLNTQKTMGADPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFK 143 (361)
T ss_dssp STTCEEEEEEEET----TTT-EEEEEEEEECSSSCEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECC
T ss_pred CCCCcEEEEEEeC----CCC-cEEEeeEeccCCCCcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEcc
Confidence 7999999842 112 11233334445566777887 456665555 688999999986544332211000 0
Q ss_pred ------CCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce------e------EEecCCCCCceeEEEECCCCC
Q 046451 169 ------GSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP------V------ISFSESIKRRCSVLQWNPDVA 230 (719)
Q Consensus 169 ------~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~------~------~~~~~~~~~~i~~l~~sp~g~ 230 (719)
...+...+.+++|+++|..++++...++.|++|++..... + ..+..........++|+++|+
T Consensus 144 g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~ 223 (361)
T 3scy_A 144 GSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK 223 (361)
T ss_dssp CCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSS
T ss_pred CCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCC
Confidence 0112335688999999865556666689999999875431 1 122223566788999999996
Q ss_pred cEEEEEeCCCCCCcEEEEecCCCCC-ceEEe---eCCCCCeeEEEeCCCCCCeEEEEeC--CCcEEEEECC--CCe--EE
Q 046451 231 TQLVVASDEDSSPALRLWDMRNTMS-PVKEF---VGHTKGVIAMSWCPNDSSYLLTCAK--DNRTICWDTV--SGE--IV 300 (719)
Q Consensus 231 ~~l~~~s~d~~~~~I~lwDl~~~~~-~~~~~---~~h~~~V~~v~~sp~d~~~l~sgs~--Dg~I~iwd~~--~~~--~~ 300 (719)
.++++...++ .|.+||++++.. .+..+ ..+.....+++|+| |+++|+++.. ++.|.+|++. +++ .+
T Consensus 224 ~l~v~~~~~~---~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp-dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~ 299 (361)
T 3scy_A 224 FAYLINEIGG---TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP-DGKYLYASNRLKADGVAIFKVDETNGTLTKV 299 (361)
T ss_dssp EEEEEETTTC---EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT-TSSEEEEEECSSSCEEEEEEECTTTCCEEEE
T ss_pred EEEEEcCCCC---eEEEEEecCCceEEeEEEecCCCCCCCcccEEECC-CCCEEEEECCCCCCEEEEEEEcCCCCcEEEe
Confidence 5445444555 899999975321 12222 22335578999999 8888877665 4899999985 444 45
Q ss_pred EEecCCCCCeEEeEEcCCCCCEEEEEe-CCCcEEEEeC--CCCcccc
Q 046451 301 SELPAGTNWNFDIHWYPKIPGVISASS-FDGKIGIYNI--EGCSRYG 344 (719)
Q Consensus 301 ~~l~~h~~~v~~l~~spdg~~~las~s-~Dg~I~iwd~--~~~~~~~ 344 (719)
..+.. ...+.+++|+||| ++|++++ .++.|.+|++ +++++..
T Consensus 300 ~~~~~-g~~~~~~~~spdg-~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 300 GYQLT-GIHPRNFIITPNG-KYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp EEEEC-SSCCCEEEECTTS-CEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred eEecC-CCCCceEEECCCC-CEEEEEECCCCCEEEEEEECCCCcEee
Confidence 55555 4568899999999 5555554 7799999655 4665544
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=1.6e-19 Score=190.90 Aligned_cols=286 Identities=8% Similarity=0.033 Sum_probs=186.5
Q ss_pred eEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEc
Q 046451 12 SVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGL 91 (719)
Q Consensus 12 ~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs 91 (719)
.++++++++++++++.++.| .+||+..+.....+. ......+..++|++++. .+++++.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v----------~~~d~~~~~~~~~~~----~~~~~~~~~~~~s~dg~-------~~~v~~~ 62 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNL----------HVVDVASDTVYKSCV----MPDKFGPGTAMMAPDNR-------TAYVLNN 62 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEE----------EEEETTTTEEEEEEE----CSSCCSSCEEEECTTSS-------EEEEEET
T ss_pred cccccCCCEEEEEeCCCCeE----------EEEECCCCcEEEEEe----cCCCCCCceeEECCCCC-------EEEEEeC
Confidence 56789999999999877766 788876543322221 11222578999999982 3556677
Q ss_pred CCCcEEEEcCCccccCCCCCCCCceeeeccc------cCCEEEEEEeCCCCCEEEEEeCC------------CcEEEEcC
Q 046451 92 VDGSIDIWNPLSLISSGETGGNPLIAHLSRH------KGPVRGLEFNSFTPNLLASGADD------------GEICIWDL 153 (719)
Q Consensus 92 ~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h------~~~V~~l~fsp~~~~~lasgs~d------------g~I~iwdl 153 (719)
.++.|.+||+ .++ +.+..+..+ ...+.+++|++ ++++|++++.+ +.|.+||+
T Consensus 63 ~~~~i~~~d~------~t~---~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~ 132 (349)
T 1jmx_B 63 HYGDIYGIDL------DTC---KNTFHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFST 132 (349)
T ss_dssp TTTEEEEEET------TTT---EEEEEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEG
T ss_pred CCCcEEEEeC------CCC---cEEEEEEcccccccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEEC
Confidence 8899999998 334 444444422 23478899999 78888888865 89999999
Q ss_pred CCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCC---------------
Q 046451 154 SAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKR--------------- 218 (719)
Q Consensus 154 ~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~--------------- 218 (719)
.+++....+..+. +...+.+++|+++|. +++ ++ +.|++||+.+++.+..+......
T Consensus 133 ~~~~~~~~~~~~~-----~~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (349)
T 1jmx_B 133 ADGLEAKPVRTFP-----MPRQVYLMRAADDGS-LYV-AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPH 203 (349)
T ss_dssp GGGGGBCCSEEEE-----CCSSCCCEEECTTSC-EEE-ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCC
T ss_pred CCccccceeeecc-----CCCcccceeECCCCc-EEE-cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecC
Confidence 8754332211111 223588999999985 444 43 34999999999887776522100
Q ss_pred --------ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEE
Q 046451 219 --------RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI 290 (719)
Q Consensus 219 --------~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~ 290 (719)
....+++++++........... .+..+|+.+....+..+..+...+.+++|++.++++|+++ ++.|.
T Consensus 204 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~ 278 (349)
T 1jmx_B 204 QSPRHEFSMLYTIARFKDDKQDPATADLLY---GYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLA 278 (349)
T ss_dssp CCTTCEEEEEEEEEEC-------CCCEEEE---EEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEE
T ss_pred CCcceeEEeeeeeeecCCCcCCccccccce---eEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEE
Confidence 3344666655421111111110 1222454443222222333556788999998556777777 88999
Q ss_pred EEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 291 CWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 291 iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+||+.+++.+..+..+. .+.+++|++++. .|++++.++.|++||+++++.+.
T Consensus 279 ~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~-~l~~~~~~~~v~v~d~~~~~~~~ 330 (349)
T 1jmx_B 279 KYDLKQRKLIKAANLDH-TYYCVAFDKKGD-KLYLGGTFNDLAVFNPDTLEKVK 330 (349)
T ss_dssp EEETTTTEEEEEEECSS-CCCEEEECSSSS-CEEEESBSSEEEEEETTTTEEEE
T ss_pred EEECccCeEEEEEcCCC-CccceEECCCCC-EEEEecCCCeEEEEeccccceee
Confidence 99999999888876543 478999999994 55557778999999999987765
No 152
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=3.8e-19 Score=195.11 Aligned_cols=218 Identities=17% Similarity=0.173 Sum_probs=152.4
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCc-------cc---ceeecccCCCCCceeeeecCCCC
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSED-------RD---LLLVGESPSSERFNRLAWGKNGS 77 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~-------~~---~~~~~~~~~~~~V~~l~~sp~g~ 77 (719)
..++.+++++++.+|++++.+| + +||+....... .. ........+...|++++|++++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v----------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg- 104 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-L----------QIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN- 104 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-E----------EEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTS-
T ss_pred CCccEEEEecCCCEEEEECCCE-E----------EEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCC-
Confidence 4588999999999999998777 4 45554311000 00 0011223456789999999998
Q ss_pred CCCCCccceEE----EEcCCCcEEEEcCCccccCCCC--CCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEE
Q 046451 78 GSEDFSLGLVA----GGLVDGSIDIWNPLSLISSGET--GGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIW 151 (719)
Q Consensus 78 ~~~~~~~~~la----sgs~dg~I~lwd~~~~~~~~~~--~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iw 151 (719)
++|+ +|+.|+.|+|||+.+....... .....+..+.+|...|.+++|+++++++|++++.||+|+||
T Consensus 105 -------~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iw 177 (434)
T 2oit_A 105 -------LTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVL 177 (434)
T ss_dssp -------CEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred -------CEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEE
Confidence 6788 7889999999998543110000 00012456677999999999999558999999999999999
Q ss_pred cCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC------CCCCceeEEEE
Q 046451 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE------SIKRRCSVLQW 225 (719)
Q Consensus 152 dl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~------~~~~~i~~l~~ 225 (719)
|+++...... ...|...|++++|+++| .+|++|+.||+|++||++ ++....+.. .|...+.+++|
T Consensus 178 D~~~~~~~~~-------~~~~~~~v~~v~wspdg-~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w 248 (434)
T 2oit_A 178 QVTETVKVCA-------TLPSTVAVTSVCWSPKG-KQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLW 248 (434)
T ss_dssp EESSSEEEEE-------EECGGGCEEEEEECTTS-SCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEE
T ss_pred EcCCCcceee-------ccCCCCceeEEEEcCCC-CEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEE
Confidence 9988743211 12366789999999997 689999999999999998 555554432 12338999999
Q ss_pred CCCCCcEEEEEeCCCC---CCcEEEEecCCC
Q 046451 226 NPDVATQLVVASDEDS---SPALRLWDMRNT 253 (719)
Q Consensus 226 sp~g~~~l~~~s~d~~---~~~I~lwDl~~~ 253 (719)
++++..+++.+..++. ...+++||+++.
T Consensus 249 ~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 249 IGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9987433344444432 224999999864
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=1.8e-19 Score=205.66 Aligned_cols=263 Identities=10% Similarity=0.048 Sum_probs=189.1
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcC-CCcEEEEcCCccccCCCCCCCCceeeecccc-CCEEEEEEeCCCCCEEEE
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLV-DGSIDIWNPLSLISSGETGGNPLIAHLSRHK-GPVRGLEFNSFTPNLLAS 141 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~-dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~fsp~~~~~las 141 (719)
...|++++|++|| +.||+++. ||+++||+++ . .....+..|. ..+..++|+| | +++++
T Consensus 21 ~~~~~~~~~~~DG--------~~la~~s~~~g~~~lw~~~------~----g~~~~lt~~~~~~~~~~~~sp-d-~~l~~ 80 (582)
T 3o4h_A 21 AVEKYSLQGVVDG--------DKLLVVGFSEGSVNAYLYD------G----GETVKLNREPINSVLDPHYGV-G-RVILV 80 (582)
T ss_dssp HSCEEEEEEEETT--------TEEEEEEEETTEEEEEEEE------T----TEEEECCSSCCSEECEECTTC-S-EEEEE
T ss_pred ccchheeecCCCC--------CeEEEEEccCCceeEEEEc------C----CCcEeeecccccccccccCCC-C-eEEEE
Confidence 4579999999999 68887776 9999999972 2 3344455555 6899999998 5 77777
Q ss_pred EeC---CCcEEEEcCCC--CCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCC
Q 046451 142 GAD---DGEICIWDLSA--PAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESI 216 (719)
Q Consensus 142 gs~---dg~I~iwdl~~--~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~ 216 (719)
++. +...+||.+.. ......+ .. ...+...+|++++..++++.+.++.+.+||+.+++...... +
T Consensus 81 ~~~~~g~~~~~l~~~~~~~~g~~~~l---~~-----~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~--~ 150 (582)
T 3o4h_A 81 RDVSKGAEQHALFKVNTSRPGEEQRL---EA-----VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR--L 150 (582)
T ss_dssp EECSTTSCCEEEEEEETTSTTCCEEC---TT-----SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE--E
T ss_pred eccCCCCcceEEEEEeccCCCccccc---cC-----CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec--C
Confidence 775 45566665543 2222221 11 11344668888876666666666667799999887655444 2
Q ss_pred CCceeEEEECCCCCcEEEEEeCC-CCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCC--cEEEEE
Q 046451 217 KRRCSVLQWNPDVATQLVVASDE-DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDN--RTICWD 293 (719)
Q Consensus 217 ~~~i~~l~~sp~g~~~l~~~s~d-~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg--~I~iwd 293 (719)
.. .+++|+|||+ .+++++.+ ++...|++||+.++. .+.+..|...+..++|+| ||++|+++..++ .|++||
T Consensus 151 ~~--~~~~~spDG~-~la~~~~~~~~~~~i~~~d~~~g~--~~~l~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d 224 (582)
T 3o4h_A 151 PG--FGFVSDIRGD-LIAGLGFFGGGRVSLFTSNLSSGG--LRVFDSGEGSFSSASISP-GMKVTAGLETAREARLVTVD 224 (582)
T ss_dssp SS--CEEEEEEETT-EEEEEEEEETTEEEEEEEETTTCC--CEEECCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEEC
T ss_pred CC--ceEEECCCCC-EEEEEEEcCCCCeEEEEEcCCCCC--ceEeecCCCccccceECC-CCCEEEEccCCCeeEEEEEc
Confidence 22 7899999996 45544444 222379999997653 457788888999999999 999999888888 899999
Q ss_pred CCCCeEEEEecCCCCCeEEeE--------EcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCC
Q 046451 294 TVSGEIVSELPAGTNWNFDIH--------WYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPA 365 (719)
Q Consensus 294 ~~~~~~~~~l~~h~~~v~~l~--------~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~ 365 (719)
+.+++.. .+..|...+..+. |+||| .++++++.|++++||++ ++..... . .+. .
T Consensus 225 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--g~~~~~~----~-------~~v---~ 286 (582)
T 3o4h_A 225 PRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID--GERVEAP----Q-------GNH---G 286 (582)
T ss_dssp TTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET--TEEECCC----S-------SEE---E
T ss_pred CCCCcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE--CCeeccC----C-------Cce---E
Confidence 9999887 7778877788888 99999 89999999999999999 4443210 0 111 2
Q ss_pred ceeeeeCCcEEEEccC
Q 046451 366 GASFGFGGKLVSFHPK 381 (719)
Q Consensus 366 ~~s~s~~Gklv~~~~~ 381 (719)
.++|+ ||++++....
T Consensus 287 ~~~~s-dg~~l~~~s~ 301 (582)
T 3o4h_A 287 RVVLW-RGKLVTSHTS 301 (582)
T ss_dssp EEEEE-TTEEEEEEEE
T ss_pred EEEec-CCEEEEEEcC
Confidence 46888 8887755433
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.82 E-value=2.8e-19 Score=204.07 Aligned_cols=274 Identities=14% Similarity=0.092 Sum_probs=188.5
Q ss_pred CccceEEEcCCCCeEEEeec-cceeecccCCCceEEEEEeeccCCcccceeecccCCC-CCceeeeecCCCCCCCCCccc
Q 046451 8 NRSASVAFAPDAPYMAAGTM-AGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSS-ERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~-dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~-~~V~~l~~sp~g~~~~~~~~~ 85 (719)
..|++++|||||++||+++. +|.+ +||+++.+.. .....+. ..+.+++|++| +
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~----------~lw~~~~g~~------~~lt~~~~~~~~~~~~spd---------~ 76 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSV----------NAYLYDGGET------VKLNREPINSVLDPHYGVG---------R 76 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEE----------EEEEEETTEE------EECCSSCCSEECEECTTCS---------E
T ss_pred cchheeecCCCCCeEEEEEccCCce----------eEEEEcCCCc------EeeecccccccccccCCCC---------e
Confidence 46899999999999999875 6655 8899854322 1112334 58999999987 4
Q ss_pred eEEEEcC---CCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCcc
Q 046451 86 LVAGGLV---DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF 162 (719)
Q Consensus 86 ~lasgs~---dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~ 162 (719)
++++++. +...+||.+... .++ ... .+..+. .+...+|++++...+++.+.++.+.|||+.+++....
T Consensus 77 ~l~~~~~~~g~~~~~l~~~~~~---~~g---~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l- 147 (582)
T 3o4h_A 77 VILVRDVSKGAEQHALFKVNTS---RPG---EEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLREL- 147 (582)
T ss_dssp EEEEEECSTTSCCEEEEEEETT---STT---CCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEE-
T ss_pred EEEEeccCCCCcceEEEEEecc---CCC---ccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEe-
Confidence 7777765 455677665310 012 122 332222 2346688884444455555555666999987754322
Q ss_pred CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC----CcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeC
Q 046451 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYN----GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASD 238 (719)
Q Consensus 163 ~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d----g~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~ 238 (719)
.. +.. .+++|+|+|. +|++++.+ +.|++||+.+++.. .+. .+...+..++|+|||+ .|+++..
T Consensus 148 --~~-----~~~--~~~~~spDG~-~la~~~~~~~~~~~i~~~d~~~g~~~-~l~-~~~~~~~~~~~SpDG~-~l~~~~~ 214 (582)
T 3o4h_A 148 --AR-----LPG--FGFVSDIRGD-LIAGLGFFGGGRVSLFTSNLSSGGLR-VFD-SGEGSFSSASISPGMK-VTAGLET 214 (582)
T ss_dssp --EE-----ESS--CEEEEEEETT-EEEEEEEEETTEEEEEEEETTTCCCE-EEC-CSSCEEEEEEECTTSC-EEEEEEC
T ss_pred --ec-----CCC--ceEEECCCCC-EEEEEEEcCCCCeEEEEEcCCCCCce-Eee-cCCCccccceECCCCC-EEEEccC
Confidence 11 111 7899999984 77776666 78999999988765 444 5778889999999996 4555444
Q ss_pred CCCCCcEEEEecCCCCCceEEeeCCCCCeeEEE--------eCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCe
Q 046451 239 EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMS--------WCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWN 310 (719)
Q Consensus 239 d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~--------~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v 310 (719)
++ ...|++||+.++ +.. .+.+|...+..++ |+| |+.++++++.|++++||++ ++.+. .....+
T Consensus 215 ~~-~~~i~~~d~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v 285 (582)
T 3o4h_A 215 AR-EARLVTVDPRDG-SVE-DLELPSKDFSSYRPTAITWLGYLP-DGRLAVVARREGRSAVFID--GERVE---APQGNH 285 (582)
T ss_dssp SS-CEEEEEECTTTC-CEE-ECCCSCSHHHHHCCSEEEEEEECT-TSCEEEEEEETTEEEEEET--TEEEC---CCSSEE
T ss_pred CC-eeEEEEEcCCCC-cEE-EccCCCcChhhhhhccccceeEcC-CCcEEEEEEcCCcEEEEEE--CCeec---cCCCce
Confidence 43 237999999865 334 6677877777777 999 7789999999999999999 76654 334568
Q ss_pred EEeEEcCCCCCEEEEEeCCC---cEEEEeCCC
Q 046451 311 FDIHWYPKIPGVISASSFDG---KIGIYNIEG 339 (719)
Q Consensus 311 ~~l~~spdg~~~las~s~Dg---~I~iwd~~~ 339 (719)
.+++|+ ++ .++++++.+. .|.+||..+
T Consensus 286 ~~~~~s-dg-~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 286 GRVVLW-RG-KLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEEE-TT-EEEEEEEETTEEEEEEEETTCC
T ss_pred EEEEec-CC-EEEEEEcCCCCCCeEEEEcCCC
Confidence 999999 87 6777777664 467777654
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=2.6e-18 Score=182.28 Aligned_cols=262 Identities=8% Similarity=0.096 Sum_probs=172.1
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
+...+..++|||||+ |++++..+ .++.|.+|+++.+.... +.....+...+..++|++++ +
T Consensus 38 ~~~~p~~~a~spdg~-l~~~~~~~-------~~~~v~~~~~~~g~~~~---~~~~~~~~~~p~~~a~spdg--------~ 98 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYSVDKED-------DEGGIAAWQIDGQTAHK---LNTVVAPGTPPAYVAVDEAR--------Q 98 (347)
T ss_dssp ECSCCCCEEECTTCE-EEEEEEET-------TEEEEEEEEEETTEEEE---EEEEEEESCCCSEEEEETTT--------T
T ss_pred ccCCcceEEEccCCe-EEEEEecC-------CCceEEEEEecCCcEEE---eeeeecCCCCCEEEEECCCC--------C
Confidence 446678899999999 55554321 23445889986433211 11113356778899999998 5
Q ss_pred eEEEEc-CCCcEEEEcCCccccCCCCCCCCceeeecc---------ccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCC
Q 046451 86 LVAGGL-VDGSIDIWNPLSLISSGETGGNPLIAHLSR---------HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA 155 (719)
Q Consensus 86 ~lasgs-~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~---------h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~ 155 (719)
+|++++ .++.|.+|++.. ++ ....+..+.. +...+.+++|++ +++++++...++.|++||+..
T Consensus 99 ~l~~~~~~~~~v~v~~~~~-----~g-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 99 LVYSANYHKGTAEVMKIAA-----DG-ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp EEEEEETTTTEEEEEEECT-----TS-CEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECT
T ss_pred EEEEEeCCCCEEEEEEeCC-----CC-CeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECC
Confidence 666665 789999999842 11 1122222221 123588999999 667777777789999999983
Q ss_pred CCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC--Cce--eEEecCCC-----CCceeEEEEC
Q 046451 156 PAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK--QKP--VISFSESI-----KRRCSVLQWN 226 (719)
Q Consensus 156 ~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~--~~~--~~~~~~~~-----~~~i~~l~~s 226 (719)
.........+. .........++|+++|..+++++..++.|.+|++.. ++. +..+.... ...+..++|+
T Consensus 172 ~g~~~~~~~~~---~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 248 (347)
T 3hfq_A 172 AGQLSEQSVLT---MEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLS 248 (347)
T ss_dssp TSCEEEEEEEE---CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEEC
T ss_pred CCcEEEeeeEE---cCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEEC
Confidence 32222110011 112236788999999865666667789999999874 432 22222111 1458889999
Q ss_pred CCCCcEEEEEeCCCCCCcEEEEecCCCC--CceEEeeCCCCCeeEEEeCCCCCCeEEEEeC-CCcEEEE--ECCCCeEE
Q 046451 227 PDVATQLVVASDEDSSPALRLWDMRNTM--SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAK-DNRTICW--DTVSGEIV 300 (719)
Q Consensus 227 p~g~~~l~~~s~d~~~~~I~lwDl~~~~--~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~-Dg~I~iw--d~~~~~~~ 300 (719)
+||+.++++...++ .|.+||+.... ..+..+..+...+..++|+| |+++|++++. ++.|.+| |..+++..
T Consensus 249 pdG~~l~v~~~~~~---~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 249 HDGHFLYVSNRGYN---TLAVFAVTADGHLTLIQQISTEGDFPRDFDLDP-TEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp TTSCEEEEEEETTT---EEEEEEECGGGCEEEEEEEECSSSCCCEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCCCEEEEEeCCCC---EEEEEEECCCCcEEEeEEEecCCCCcCeEEECC-CCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 99976667777666 89999986322 33455566667789999999 8888887775 4899999 55667654
No 156
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.81 E-value=2.1e-19 Score=197.12 Aligned_cols=209 Identities=15% Similarity=0.221 Sum_probs=154.0
Q ss_pred cCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCC-------Ccc-CCccCCCCCCCCCeEEEEecCCCCcEEE----
Q 046451 123 KGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEP-------SHF-PPLRGNGSAAQGEISFVSWNSKVQHILA---- 190 (719)
Q Consensus 123 ~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~-------~~~-~~l~~~~~~h~~~I~~l~~sp~g~~~l~---- 190 (719)
...++.+++++ ++.+|++++.|+ |+||+....... ..+ .........+...|.+++|++++. +|+
T Consensus 36 ~~~~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~lav~~~ 112 (434)
T 2oit_A 36 KERSSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNL-TLSACMM 112 (434)
T ss_dssp CSCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSC-EEEEEEE
T ss_pred CCCccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCC-EEEEEEe
Confidence 34578899999 778999999888 888875421110 000 000000112455799999999985 666
Q ss_pred EEeCCCcEEEEECCCC--------ce---eEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEE
Q 046451 191 STSYNGTTVVWDLKKQ--------KP---VISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE 259 (719)
Q Consensus 191 s~s~dg~I~iwd~~~~--------~~---~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~ 259 (719)
+++.|+.|+|||++++ +. +..+. +|...|.+++|+|++..+|++++.|+ +|++||+++. ..+..
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~p~~~~~las~s~Dg---~v~iwD~~~~-~~~~~ 187 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLK-DAGGMVIDMKWNPTVPSMVAVCLADG---SIAVLQVTET-VKVCA 187 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCC-SGGGSEEEEEECSSCTTEEEEEETTS---CEEEEEESSS-EEEEE
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccC-CCCCceEEEEECCCCCCEEEEEECCC---eEEEEEcCCC-cceee
Confidence 7888999999998764 22 22233 68899999999998667899999998 9999999876 44555
Q ss_pred eeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC-------CCeEEeEEcCCCCCEEEEEeCCCc-
Q 046451 260 FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT-------NWNFDIHWYPKIPGVISASSFDGK- 331 (719)
Q Consensus 260 ~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~-------~~v~~l~~spdg~~~las~s~Dg~- 331 (719)
..+|...|.+++|++ ++++|++|+.||.|++||++ ++....+..|. ..|.+++|++++..+++..+.||.
T Consensus 188 ~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~ 265 (434)
T 2oit_A 188 TLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTL 265 (434)
T ss_dssp EECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCS
T ss_pred ccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCcc
Confidence 667889999999999 89999999999999999998 66666555432 379999999988333344445543
Q ss_pred -----EEEEeCCCCc
Q 046451 332 -----IGIYNIEGCS 341 (719)
Q Consensus 332 -----I~iwd~~~~~ 341 (719)
+++|++.+..
T Consensus 266 ~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 266 ETSPDVVMALLPKKE 280 (434)
T ss_dssp SSCCEEEEEECCCTT
T ss_pred CCCCceEEEEeccCC
Confidence 8999998753
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.81 E-value=4e-19 Score=208.02 Aligned_cols=287 Identities=13% Similarity=0.103 Sum_probs=185.9
Q ss_pred cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 10 SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 10 V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
..+++|+|||++++++ .||. |++||+..+.....+. ........+.+++||||| ++|++
T Consensus 18 ~~~~~~s~dg~~~~~~-~d~~----------i~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~SpDg--------~~la~ 76 (719)
T 1z68_A 18 TFFPNWISGQEYLHQS-ADNN----------IVLYNIETGQSYTILS--NRTMKSVNASNYGLSPDR--------QFVYL 76 (719)
T ss_dssp CCCCEESSSSEEEEEC-TTSC----------EEEEESSSCCEEEEEC--HHHHHTTTCSEEEECTTS--------SEEEE
T ss_pred CCccEECCCCeEEEEc-CCCC----------EEEEEcCCCcEEEEEc--cccccccceeeEEECCCC--------CeEEE
Confidence 3478999999776655 3554 4889988665322110 000001248899999999 68887
Q ss_pred EcC---------CCcEEEEcCCccccCCCCCCCCce--eeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC
Q 046451 90 GLV---------DGSIDIWNPLSLISSGETGGNPLI--AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE 158 (719)
Q Consensus 90 gs~---------dg~I~lwd~~~~~~~~~~~~~~~~--~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~ 158 (719)
++. ++.|++||+. ++ +.+ ..+ ...+..++|+| |++.|+.+. |+.|++||+.+++.
T Consensus 77 ~~~~~~~~~~s~~~~i~~~d~~------~g---~~~~~~~l---~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~ 142 (719)
T 1z68_A 77 ESDYSKLWRYSYTATYYIYDLS------NG---EFVRGNEL---PRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPP 142 (719)
T ss_dssp EEEEEECSSSCEEEEEEEEETT------TT---EECCSSCC---CSSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCC
T ss_pred EecCceeEEeecceEEEEEECC------CC---ccccceec---CcccccceECC-CCCEEEEEE-CCeEEEEeCCCCCc
Confidence 765 7899999984 33 221 122 25688999999 788888876 78999999988765
Q ss_pred CCccCCccCCCC----CCC---------CCeEEEEecCCCCcEEEEEeCCC-----------------------------
Q 046451 159 PSHFPPLRGNGS----AAQ---------GEISFVSWNSKVQHILASTSYNG----------------------------- 196 (719)
Q Consensus 159 ~~~~~~l~~~~~----~h~---------~~I~~l~~sp~g~~~l~s~s~dg----------------------------- 196 (719)
.... ..+... ++. ....+++|+|+|+ .|++++.|.
T Consensus 143 ~~l~--~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~ 219 (719)
T 1z68_A 143 FQIT--FNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGK-FLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGA 219 (719)
T ss_dssp EECC--CCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSS-EEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTS
T ss_pred EEEe--cCCCcCCeEcccccceeeeecccCcccEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCC
Confidence 3221 011000 111 1225899999985 777766542
Q ss_pred -----cEEEEECCCCcee--EEec-----CCCCCceeEEEECCCCCcEEEEEeCC-CCCCcEEEEe----cCCCCCceEE
Q 046451 197 -----TTVVWDLKKQKPV--ISFS-----ESIKRRCSVLQWNPDVATQLVVASDE-DSSPALRLWD----MRNTMSPVKE 259 (719)
Q Consensus 197 -----~I~iwd~~~~~~~--~~~~-----~~~~~~i~~l~~sp~g~~~l~~~s~d-~~~~~I~lwD----l~~~~~~~~~ 259 (719)
.|++||+.+++.+ ..+. ..+...+..++|+||+ .++++.... .....|++|| +.++ +....
T Consensus 220 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d~~~~~~~g-~~~~~ 297 (719)
T 1z68_A 220 KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE-RVCLQWLKRVQNVSVLSICDFREDWQTW-DCPKT 297 (719)
T ss_dssp CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSS-EEEEEEEESSTTEEEEEEEEECSSSSSE-ECCGG
T ss_pred CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCC-eEEEEEeccccCeEEEEEEcccCCCCCC-ceEEE
Confidence 7889999987653 1221 1467788999999996 455554332 2122588899 6554 22333
Q ss_pred e----eCCCCCee-----EEEeCCCCCCeEEE--EeCCC--cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEE
Q 046451 260 F----VGHTKGVI-----AMSWCPNDSSYLLT--CAKDN--RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISAS 326 (719)
Q Consensus 260 ~----~~h~~~V~-----~v~~sp~d~~~l~s--gs~Dg--~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~ 326 (719)
+ .+|...+. .+.|++ |++.|+. +..+| .|.+||+.+++ ...+..+...+..+.++ ++..+++++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~ 374 (719)
T 1z68_A 298 QEHIEESRTGWAGGFFVSTPVFSY-DAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSS 374 (719)
T ss_dssp GEEEEECSSSCSSSSSCCCCEECT-TSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEE
T ss_pred EecccccCCceEccccCCccEECC-CCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEE
Confidence 3 46777776 889999 7775544 44555 57777887766 45565565568888877 775555665
Q ss_pred eC----CCcEEEEeCCC
Q 046451 327 SF----DGKIGIYNIEG 339 (719)
Q Consensus 327 s~----Dg~I~iwd~~~ 339 (719)
.. ++.+++|.+..
T Consensus 375 ~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 375 NEFEEYPGRRNIYRISI 391 (719)
T ss_dssp SCGGGCTTCBEEEEEEC
T ss_pred ecCCCCCceEEEEEEeC
Confidence 54 48889998764
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.80 E-value=3.6e-17 Score=174.52 Aligned_cols=281 Identities=12% Similarity=0.112 Sum_probs=175.4
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecc-cCCCCCceeeeecCCCCCCCCCcc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE-SPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~-~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
+...+..++|||||++|++++.++ ..++.+.+|+++..... +..+.. ..+......+++ ++.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~------~~~~~v~~~~~~~~~g~--~~~~~~~~~~~~~p~~~~~--dg~------- 110 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFS------KDQAAVSAFAFDKEKGT--LHLLNTQKTMGADPCYLTT--NGK------- 110 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCS------STTCEEEEEEEETTTTE--EEEEEEEECSSSCEEEEEE--CSS-------
T ss_pred cCCCCceEEECCCCCEEEEEEccC------CCCCcEEEEEEeCCCCc--EEEeeEeccCCCCcEEEEE--CCC-------
Confidence 456678899999999999987752 12356688998854221 112221 224456677888 552
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeee-----------ccccCCEEEEEEeCCCCCEEEE-EeCCCcEEEEc
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL-----------SRHKGPVRGLEFNSFTPNLLAS-GADDGEICIWD 152 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l-----------~~h~~~V~~l~fsp~~~~~las-gs~dg~I~iwd 152 (719)
.++++...++.|.+|++... + ....+... ..+...+.+++|++ ++++|++ ...++.|++|+
T Consensus 111 ~l~~~~~~~~~v~~~~~~~~-----g-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~ 183 (361)
T 3scy_A 111 NIVTANYSGGSITVFPIGQD-----G-ALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLGTDQIHKFN 183 (361)
T ss_dssp EEEEEETTTTEEEEEEBCTT-----S-CBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCEEEEEEeCCC-----C-cCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCCCCEEEEEE
Confidence 34444557899999998421 1 00111111 11233468899999 7775554 44589999999
Q ss_pred CCCCCC------CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe-CCCcEEEEECCCCce--eEEecC--CCCCcee
Q 046451 153 LSAPAE------PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS-YNGTTVVWDLKKQKP--VISFSE--SIKRRCS 221 (719)
Q Consensus 153 l~~~~~------~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s-~dg~I~iwd~~~~~~--~~~~~~--~~~~~i~ 221 (719)
+..... +...................++|+++|. +|++++ .++.|.+||+.+++. +..+.. .+.....
T Consensus 184 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~ 262 (361)
T 3scy_A 184 INPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK-FAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSG 262 (361)
T ss_dssp ECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSS-EEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEE
T ss_pred EcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCC-EEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcc
Confidence 876542 1100000000112334678999999985 555545 689999999987654 222221 2334567
Q ss_pred EEEECCCCCcEEEEEeC-CCCCCcEEEEecCCC-CC--ceEEeeCCCCCeeEEEeCCCCCCeEEEEe-CCCcEEEE--EC
Q 046451 222 VLQWNPDVATQLVVASD-EDSSPALRLWDMRNT-MS--PVKEFVGHTKGVIAMSWCPNDSSYLLTCA-KDNRTICW--DT 294 (719)
Q Consensus 222 ~l~~sp~g~~~l~~~s~-d~~~~~I~lwDl~~~-~~--~~~~~~~h~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iw--d~ 294 (719)
.++|++||+.++++... ++ .|.+|++... .. .+..+.. ...+.+++|+| ++++|++++ .++.|.+| |.
T Consensus 263 ~i~~spdg~~l~v~~~~~~~---~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 263 DIHLSPDGKYLYASNRLKAD---GVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITP-NGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp EEEECTTSSEEEEEECSSSC---EEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECT-TSCEEEEEETTTTEEEEEEECT
T ss_pred cEEECCCCCEEEEECCCCCC---EEEEEEEcCCCCcEEEeeEecC-CCCCceEEECC-CCCEEEEEECCCCCEEEEEEEC
Confidence 99999999755455544 45 8999999622 22 2333443 45788999999 888888877 67899996 55
Q ss_pred CCCeEEEEec-CCCCCeEEeEEc
Q 046451 295 VSGEIVSELP-AGTNWNFDIHWY 316 (719)
Q Consensus 295 ~~~~~~~~l~-~h~~~v~~l~~s 316 (719)
.+++...... .+...+.||.|.
T Consensus 338 ~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 338 ATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp TTCCEEECSCCEECSSEEEEEEE
T ss_pred CCCcEeecceeeeCCCCeEEEEc
Confidence 5777655432 244568888886
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=2.1e-18 Score=201.89 Aligned_cols=303 Identities=11% Similarity=0.057 Sum_probs=195.8
Q ss_pred cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 10 SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 10 V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
+.+++|||||++||+++..+.+. ..+.++.|++||++.++...... ....+.+++||||| +.|+.
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~-~~s~~~~i~~~d~~~g~~~~~~~------l~~~~~~~~~SPDG--------~~la~ 126 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLW-RYSYTATYYIYDLSNGEFVRGNE------LPRPIQYLCWSPVG--------SKLAY 126 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECS-SSCEEEEEEEEETTTTEECCSSC------CCSSBCCEEECSST--------TCEEE
T ss_pred eeeEEECCCCCeEEEEecCceeE-EeecceEEEEEECCCCcccccee------cCcccccceECCCC--------CEEEE
Confidence 88999999999999987633110 01234567999988654311011 12568899999999 67887
Q ss_pred EcCCCcEEEEcCCccccCCCCCCCCceeee-ccccCCE-----------------EEEEEeCCCCCEEEEEeCCC-----
Q 046451 90 GLVDGSIDIWNPLSLISSGETGGNPLIAHL-SRHKGPV-----------------RGLEFNSFTPNLLASGADDG----- 146 (719)
Q Consensus 90 gs~dg~I~lwd~~~~~~~~~~~~~~~~~~l-~~h~~~V-----------------~~l~fsp~~~~~lasgs~dg----- 146 (719)
+. ++.|++|++.. + ...... .++...| .+++|+| |+++|++++.|.
T Consensus 127 ~~-~~~i~~~~~~~------g---~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~ 195 (719)
T 1z68_A 127 VY-QNNIYLKQRPG------D---PPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPV 195 (719)
T ss_dssp EE-TTEEEEESSTT------S---CCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCE
T ss_pred EE-CCeEEEEeCCC------C---CcEEEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCce
Confidence 75 78999999843 2 222111 2222222 4899999 889999887652
Q ss_pred -----------------------------cEEEEcCCCCCCC--CccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC
Q 046451 147 -----------------------------EICIWDLSAPAEP--SHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195 (719)
Q Consensus 147 -----------------------------~I~iwdl~~~~~~--~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d 195 (719)
.|++||+.+++.. ..+. .......|...+..++|++++ .++++....
T Consensus 196 ~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~SpD~-~~~~~~~~~ 273 (719)
T 1z68_A 196 IAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVP-VPAMIASSDYYFSWLTWVTDE-RVCLQWLKR 273 (719)
T ss_dssp EEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECC-CCHHHHTSCEEEEEEEESSSS-EEEEEEEES
T ss_pred EEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEcc-CCccCCCCcceEEEeEEeCCC-eEEEEEecc
Confidence 7889999876531 0110 000012356689999999996 566664432
Q ss_pred ----CcEEEEE----CCCCceeEEec---CCCCCcee-----EEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEE
Q 046451 196 ----GTTVVWD----LKKQKPVISFS---ESIKRRCS-----VLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE 259 (719)
Q Consensus 196 ----g~I~iwd----~~~~~~~~~~~---~~~~~~i~-----~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~ 259 (719)
..|.+|| +.+++....+. ..+...+. .+.|++||+.+++..+..++...|++||+.+.. ...
T Consensus 274 ~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~--~~~ 351 (719)
T 1z68_A 274 VQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN--AIQ 351 (719)
T ss_dssp STTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT--CEE
T ss_pred ccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc--eEe
Confidence 2488999 87776554441 24566665 889999998766655544334468888886543 456
Q ss_pred eeCCCCCeeEEEeCCCCCCeEEEEeC----CCcEEEEECCC--Ce-EEEEec----CCCCCeEEeEEcCCCCCEEEEEeC
Q 046451 260 FVGHTKGVIAMSWCPNDSSYLLTCAK----DNRTICWDTVS--GE-IVSELP----AGTNWNFDIHWYPKIPGVISASSF 328 (719)
Q Consensus 260 ~~~h~~~V~~v~~sp~d~~~l~sgs~----Dg~I~iwd~~~--~~-~~~~l~----~h~~~v~~l~~spdg~~~las~s~ 328 (719)
+..+...+..+.++ +++.+++++.. ++.++||++.. +. ....+. +|...+..+.|++++..++++++.
T Consensus 352 lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~ 430 (719)
T 1z68_A 352 ITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYG 430 (719)
T ss_dssp CSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECC
T ss_pred cccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCC
Confidence 66666678887777 34444444444 47888887653 42 123333 256678899999999666666655
Q ss_pred C--CcEEEEeCCCCccc
Q 046451 329 D--GKIGIYNIEGCSRY 343 (719)
Q Consensus 329 D--g~I~iwd~~~~~~~ 343 (719)
+ ..+.+||+.+++..
T Consensus 431 ~~~p~~~l~d~~~g~~~ 447 (719)
T 1z68_A 431 PGIPISTLHDGRTDQEI 447 (719)
T ss_dssp BSSCEEEEECSSSCCEE
T ss_pred CCCCeEEEEECCCCCEE
Confidence 4 47889999877643
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.79 E-value=1.8e-17 Score=194.61 Aligned_cols=329 Identities=11% Similarity=0.077 Sum_probs=198.2
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEE
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVA 88 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~la 88 (719)
...+++|++||++|+++ ||.| ++||+.++.....+...........+.+++||||| ++|+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg--------~~l~ 77 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNI----------LVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDG--------QFIL 77 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEE----------EEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTS--------SEEE
T ss_pred cccccEECCCCcEEEEc--CCcE----------EEEECCCCceEEEEechhhhhhcccccceEECCCC--------CEEE
Confidence 46789999999999886 6765 78888766543221111101112233458899999 6888
Q ss_pred EEcCC---------CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCC
Q 046451 89 GGLVD---------GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEP 159 (719)
Q Consensus 89 sgs~d---------g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~ 159 (719)
.++.+ +.+.+||+. ++ ....+..|.+.+...+||| |++.||.+. |+.|++||+.++...
T Consensus 78 ~~~~~~~~~r~~~~~~~~~~d~~------~~----~~~~l~~~~~~~~~~~~SP-dG~~la~~~-~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 78 LEYNYVKQWRHSYTASYDIYDLN------KR----QLITEERIPNNTQWVTWSP-VGHKLAYVW-NNDIYVKIEPNLPSY 145 (740)
T ss_dssp EEEEEEECSSSCEEEEEEEEETT------TT----EECCSSCCCTTEEEEEECS-STTCEEEEE-TTEEEEESSTTSCCE
T ss_pred EEECCeeeEEEccceEEEEEECC------CC----cEEEcccCCCcceeeEECC-CCCEEEEEE-CCeEEEEECCCCceE
Confidence 87765 667899984 33 2345667788899999999 788888874 689999999887643
Q ss_pred CccCCccCCC----CCCC---------CCeEEEEecCCCCcEEEEEeCC-C-----------------------------
Q 046451 160 SHFPPLRGNG----SAAQ---------GEISFVSWNSKVQHILASTSYN-G----------------------------- 196 (719)
Q Consensus 160 ~~~~~l~~~~----~~h~---------~~I~~l~~sp~g~~~l~s~s~d-g----------------------------- 196 (719)
... ..+.. .++. +....+.|+|||+ .|+.++.| +
T Consensus 146 ~lt--~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~-~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G 222 (740)
T 4a5s_A 146 RIT--WTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGT-FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAG 222 (740)
T ss_dssp ECC--SCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSS-EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTT
T ss_pred EEc--CCCCccceecCcccccccchhcCCCcceEECCCCC-EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCc
Confidence 221 11100 0000 1223589999985 66655422 1
Q ss_pred ------cEEEEECCC---Cc--eeEEecC-----CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC-----C
Q 046451 197 ------TTVVWDLKK---QK--PVISFSE-----SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM-----S 255 (719)
Q Consensus 197 ------~I~iwd~~~---~~--~~~~~~~-----~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~-----~ 255 (719)
+|++||+.+ ++ ....+.. .+...+..++|+|||+.++.....+.+...|++||+.++. .
T Consensus 223 ~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~ 302 (740)
T 4a5s_A 223 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCL 302 (740)
T ss_dssp SCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEEC
T ss_pred CcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcccccee
Confidence 588899988 63 2333331 2667789999999996444444443333479999998764 1
Q ss_pred ceEEe--eCCCCCee-----EEEeCCCCCCeEE-EEeC-C--CcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEE
Q 046451 256 PVKEF--VGHTKGVI-----AMSWCPNDSSYLL-TCAK-D--NRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 256 ~~~~~--~~h~~~V~-----~v~~sp~d~~~l~-sgs~-D--g~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~la 324 (719)
.+..+ .+|...|. .+.|+| ||+.|+ ..+. + ..|++||+..++... +..+.-.+..+.+ .|+..+++
T Consensus 303 ~~~~l~~~~~~~~v~~~~~~~p~fsp-DG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v~~~~~-~d~~~i~f 379 (740)
T 4a5s_A 303 VARQHIEMSTTGWVGRFRPSEPHFTL-DGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKGTWEVIGIEA-LTSDYLYY 379 (740)
T ss_dssp GGGCEEEECSSSCSSSSSCCCCEECT-TSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCSSSCEEEEEE-ECSSEEEE
T ss_pred EEEEeeeccCCceEccCcCCCceEcC-CCCEEEEEEEcCCCceEEEEEECCCCceEe-cccCCEEEEEEEE-EeCCEEEE
Confidence 12222 45666655 789999 888766 6653 3 468888997766554 4433444655542 33545666
Q ss_pred EEeC----CCcEEE--EeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCC
Q 046451 325 ASSF----DGKIGI--YNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKS 382 (719)
Q Consensus 325 s~s~----Dg~I~i--wd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~ 382 (719)
+++. .+..+| .++.++.........+... ......++|+.||+.+++...+
T Consensus 380 ~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~-------~~~~~~~~~S~dg~~~~~~~s~ 436 (740)
T 4a5s_A 380 ISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPE-------RCQYYSVSFSKEAKYYQLRCSG 436 (740)
T ss_dssp EESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTT-------TBCBEEEEECTTSSEEEEEECS
T ss_pred EEecCCCCCceeEEEEEECCCCCcceeeccccCCC-------CCceEEEEECCCCCEEEEEeCC
Confidence 6665 234444 4554443221010000000 0011246788888877666554
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.79 E-value=5.7e-18 Score=182.31 Aligned_cols=285 Identities=11% Similarity=0.002 Sum_probs=181.1
Q ss_pred eEEEcCCCCeEEEeec-cceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEE
Q 046451 12 SVAFAPDAPYMAAGTM-AGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGG 90 (719)
Q Consensus 12 ~vafSpdg~~Latgs~-dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasg 90 (719)
..+|||||++||+++. +|.. .|.+||++.++... + ...+...+..++|++|+ +.|+.+
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~~--------~l~~~d~~~g~~~~---l--t~~~~~~~~~~~~spdg--------~~l~~~ 98 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGPW--------NYYLLDLNTQVATQ---L--TEGRGDNTFGGFLSPDD--------DALFYV 98 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSSC--------EEEEEETTTCEEEE---C--CCSSCBCSSSCEECTTS--------SEEEEE
T ss_pred CccCCCCCCEEEEEEcCCCCc--------eEEEEeCCCCceEE---e--eeCCCCCccceEEcCCC--------CEEEEE
Confidence 3789999999999876 4532 34666665443221 1 12344555678999998 789999
Q ss_pred cCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEE--eCCCCCEEEEE----------------------eCCC
Q 046451 91 LVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEF--NSFTPNLLASG----------------------ADDG 146 (719)
Q Consensus 91 s~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~f--sp~~~~~lasg----------------------s~dg 146 (719)
+.++.|++||+. ++ +....+..+...+....| ++ ++.+|+.. ..+.
T Consensus 99 ~~~~~l~~~d~~------~g---~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 99 KDGRNLMRVDLA------TL---EENVVYQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp ETTTEEEEEETT------TC---CEEEEEECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred eCCCeEEEEECC------CC---cceeeeechhhcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcc
Confidence 889999999993 34 444444445555544443 67 67777643 2346
Q ss_pred cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecC-CCCcEEEEEeCC------CcEEEEECCCCceeEEecCCCC-C
Q 046451 147 EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNS-KVQHILASTSYN------GTTVVWDLKKQKPVISFSESIK-R 218 (719)
Q Consensus 147 ~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp-~g~~~l~s~s~d------g~I~iwd~~~~~~~~~~~~~~~-~ 218 (719)
.|++||+.+++.... . .+...+..+.|+| +|. .|+.+..+ ..|.++|+..++. ..+..... .
T Consensus 169 ~l~~~d~~~g~~~~l----~----~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~ 238 (388)
T 3pe7_A 169 RLMRVDLKTGESTVI----L----QENQWLGHPIYRPYDDS-TVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGE 238 (388)
T ss_dssp EEEEEETTTCCEEEE----E----EESSCEEEEEEETTEEE-EEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTE
T ss_pred eEEEEECCCCceEEe----e----cCCccccccEECCCCCC-EEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCc
Confidence 799999988753322 1 1344689999999 874 56555543 3788888876544 33331222 3
Q ss_pred ceeEEEECCCCCcEEEEEeCCCCC-CcEEEEecCCCCC-ceEEeeCCCC---CeeEEEeCCCCCCeEEEE---------e
Q 046451 219 RCSVLQWNPDVATQLVVASDEDSS-PALRLWDMRNTMS-PVKEFVGHTK---GVIAMSWCPNDSSYLLTC---------A 284 (719)
Q Consensus 219 ~i~~l~~sp~g~~~l~~~s~d~~~-~~I~lwDl~~~~~-~~~~~~~h~~---~V~~v~~sp~d~~~l~sg---------s 284 (719)
.+..++|+|||+.+++++..++.. ..|++||+.++.. .+..+.++.. ....+.|+| |++.|+.. .
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~ 317 (388)
T 3pe7_A 239 SCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVG-DGSDAPVDVQDDSGYKIE 317 (388)
T ss_dssp EEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEE-EECCC------------C
T ss_pred ccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEcc-CCCcceeEeeeccccccC
Confidence 577899999997665555543321 1399999987632 2222222100 012236899 77766643 4
Q ss_pred CCCcEEEEECCCCeEEEEecCCCC-----------CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 285 KDNRTICWDTVSGEIVSELPAGTN-----------WNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 285 ~Dg~I~iwd~~~~~~~~~l~~h~~-----------~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
.+..|++||+.+++.. .+..+.. .+.+++|++||..+++++..+|...||.++-
T Consensus 318 ~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 318 NDPFLYVFNMKNGTQH-RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp CCCEEEEEETTTTEEE-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred CCCEEEEEeccCCceE-EeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 5678999999887753 4444444 4788999999965566666678777776654
No 162
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.79 E-value=7.3e-18 Score=177.02 Aligned_cols=233 Identities=10% Similarity=0.065 Sum_probs=163.4
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccC--CEEEEEEeCCCCCE-EEEEeCCCcEEEEcCCCCCCCCc
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKG--PVRGLEFNSFTPNL-LASGADDGEICIWDLSAPAEPSH 161 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~--~V~~l~fsp~~~~~-lasgs~dg~I~iwdl~~~~~~~~ 161 (719)
++|++++.++.|.+||+ .++ +.+..+..... .+.+++|++ ++++ ++++..++.|.+||+.+++....
T Consensus 2 ~~~v~~~~~~~v~~~d~------~~~---~~~~~~~~~~~~~~~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~ 71 (337)
T 1pby_B 2 DYILAPARPDKLVVIDT------EKM---AVDKVITIADAGPTPMVPMVAP-GGRIAYATVNKSESLVKIDLVTGETLGR 71 (337)
T ss_dssp EEEEEEETTTEEEEEET------TTT---EEEEEEECTTCTTCCCCEEECT-TSSEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred cEEEEcCCCCeEEEEEC------CCC---cEEEEEEcCCCCCCccceEEcC-CCCEEEEEeCCCCeEEEEECCCCCeEee
Confidence 58999999999999998 444 55555543221 478999999 6654 56666789999999988775543
Q ss_pred cCCccCCCCCCCCCeEEEEecCCCCcEEEEEe------------CCCcEEEEECCCCceeEEecCCCCCceeEEEECCCC
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKVQHILASTS------------YNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDV 229 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s------------~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g 229 (719)
+. + .....+...+.+++|+++|. +|++++ .++.|.+||+.+++.+..+. ....+.+++|++++
T Consensus 72 ~~-~-~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg 146 (337)
T 1pby_B 72 ID-L-STPEERVKSLFGAALSPDGK-TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE--APRQITMLAWARDG 146 (337)
T ss_dssp EE-C-CBTTEEEECTTCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE--CCSSCCCEEECTTS
T ss_pred EE-c-CCcccccccccceEECCCCC-EEEEEecccccccccccccCceEEEEECCCCcEEEEEe--CCCCcceeEECCCC
Confidence 21 0 00000122567899999985 566664 57999999999988887776 35668889999999
Q ss_pred CcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCC-C---------------------
Q 046451 230 ATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD-N--------------------- 287 (719)
Q Consensus 230 ~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~D-g--------------------- 287 (719)
+.++++ ++ .|++||+.+. +.+..+..+.. ...+.|++ ++.+|+..+.+ +
T Consensus 147 ~~l~~~---~~---~i~~~d~~~~-~~~~~~~~~~~-~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (337)
T 1pby_B 147 SKLYGL---GR---DLHVMDPEAG-TLVEDKPIQSW-EAETYAQP-DVLAVWNQHESSGVMATPFYTARKDIDPADPTAY 217 (337)
T ss_dssp SCEEEE---SS---SEEEEETTTT-EEEEEECSTTT-TTTTBCCC-BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGE
T ss_pred CEEEEe---CC---eEEEEECCCC-cEeeeeecccc-CCCceeCC-CccEEeeeccCCCceeeeeecccccccccccccc
Confidence 654444 33 7999999865 44455543331 12337888 66655544432 2
Q ss_pred --cEEEEECCCCeEE-EEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 288 --RTICWDTVSGEIV-SELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 288 --~I~iwd~~~~~~~-~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
.|.+||+.+++.. ..+..+...+.+++|++++ .+|+++ ++.|++||+.+++...
T Consensus 218 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~--~~~v~~~d~~~~~~~~ 274 (337)
T 1pby_B 218 RTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAK-TRAFGA--YNVLESFDLEKNASIK 274 (337)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTS-SEEEEE--ESEEEEEETTTTEEEE
T ss_pred ccceEEEeCCCCCceEeecCCCCCceeeEEECCCC-CEEEEe--CCeEEEEECCCCcCcc
Confidence 4689999998764 2344566678899999999 566666 7999999999887654
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.78 E-value=1.7e-17 Score=177.68 Aligned_cols=274 Identities=11% Similarity=0.081 Sum_probs=173.2
Q ss_pred eEEEEEeeccCCcccceeeccc--CCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCcee
Q 046451 40 NLEIFKLDFQSEDRDLLLVGES--PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIA 117 (719)
Q Consensus 40 ~i~iwd~~~~~~~~~~~~~~~~--~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~ 117 (719)
.|.+|+++.... .+...... .....+..++|++++ ++|++++.+ .|.+|++.. ++ +...
T Consensus 15 ~i~~~~~d~~~g--~l~~~~~~~~~~~~~~~~~a~spdg--------~~l~~~~~~-~v~~~~~~~-----~g---~~~~ 75 (365)
T 1jof_A 15 AIFTVQFDDEKL--TCKLIKRTEIPQDEPISWMTFDHER--------KNIYGAAMK-KWSSFAVKS-----PT---EIVH 75 (365)
T ss_dssp EEEEEEEETTTT--EEEEEEEEECCTTCCCSEEEECTTS--------SEEEEEEBT-EEEEEEEEE-----TT---EEEE
T ss_pred cEEEEEEECCCC--CEEEeeEEccCCCCCCcEEEECCCC--------CEEEEEccc-eEEEEEECC-----CC---CEEE
Confidence 456777653322 22222211 233468899999998 678888877 999999831 23 3322
Q ss_pred eecc-ccCCEEEEEEeCCCCCE--EEEEe-------------CCCcEEEEcCCC-CCCCCccCCccCCCCCCCCCeEEEE
Q 046451 118 HLSR-HKGPVRGLEFNSFTPNL--LASGA-------------DDGEICIWDLSA-PAEPSHFPPLRGNGSAAQGEISFVS 180 (719)
Q Consensus 118 ~l~~-h~~~V~~l~fsp~~~~~--lasgs-------------~dg~I~iwdl~~-~~~~~~~~~l~~~~~~h~~~I~~l~ 180 (719)
.... ..+.+.+++|++ ++++ +++++ .+|.+.+|++.. ++....+ ......+...+.+++
T Consensus 76 ~~~~~~~g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~---~~~~~~~~~~~~~~~ 151 (365)
T 1jof_A 76 EASHPIGGHPRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNV---QNYEYQENTGIHGMV 151 (365)
T ss_dssp EEEEECCSSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEE---EEEECCTTCCEEEEE
T ss_pred eeEeecCCCCccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceE---eeEEeCCCCcceEEE
Confidence 2211 113466789999 6773 44553 689999999974 3322111 110011345789999
Q ss_pred ecCCCCcEEEEEe-CCCcEEEEECC-CCcee--EEecC-CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCC-C
Q 046451 181 WNSKVQHILASTS-YNGTTVVWDLK-KQKPV--ISFSE-SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNT-M 254 (719)
Q Consensus 181 ~sp~g~~~l~s~s-~dg~I~iwd~~-~~~~~--~~~~~-~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~-~ 254 (719)
|+++|. +|++++ .++.|++||+. +++.. ..+.. .+...+..++|+++|+.++++...++ .|.+|++... .
T Consensus 152 ~spdG~-~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~---~v~v~~~~~~~g 227 (365)
T 1jof_A 152 FDPTET-YLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGN---RICEYVIDPATH 227 (365)
T ss_dssp ECTTSS-EEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTT---EEEEEEECTTTC
T ss_pred ECCCCC-EEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCC---eEEEEEEeCCCC
Confidence 999985 555554 46899999998 66543 22321 13567899999999964444443444 8999987531 2
Q ss_pred Cce---EEee-------CCCC------CeeEEE-eCCCCCCeEEEEeCC-C-----cEEEEECC-CCeEEE---EecCCC
Q 046451 255 SPV---KEFV-------GHTK------GVIAMS-WCPNDSSYLLTCAKD-N-----RTICWDTV-SGEIVS---ELPAGT 307 (719)
Q Consensus 255 ~~~---~~~~-------~h~~------~V~~v~-~sp~d~~~l~sgs~D-g-----~I~iwd~~-~~~~~~---~l~~h~ 307 (719)
+.. ..+. +|.. .+..++ |+| |+++|++++.+ + .|.+|++. +++... .+..+.
T Consensus 228 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~ 306 (365)
T 1jof_A 228 MPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPT 306 (365)
T ss_dssp CEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSS
T ss_pred cEEEccceEEcCCCCcCCcccccccccccccEEEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCC
Confidence 221 1121 1222 478999 999 88888776643 2 89999986 566543 233445
Q ss_pred CCeEEeEEcC---CCCCEEEEEeC-CCcEEEEeCCCCcc
Q 046451 308 NWNFDIHWYP---KIPGVISASSF-DGKIGIYNIEGCSR 342 (719)
Q Consensus 308 ~~v~~l~~sp---dg~~~las~s~-Dg~I~iwd~~~~~~ 342 (719)
..+..++|+| || ++|++++. ++.|.||+++...+
T Consensus 307 ~~~~~~a~sp~~~dg-~~l~v~~~~~~~v~v~~~~~~~l 344 (365)
T 1jof_A 307 SGGHSNAVSPCPWSD-EWMAITDDQEGWLEIYRWKDEFL 344 (365)
T ss_dssp CCTTCCCEEECTTCT-TEEEEECSSSCEEEEEEEETTEE
T ss_pred CCcccceecCCCcCC-CEEEEEEcCCCeEEEEEEchhhC
Confidence 5577899999 78 67777665 58999999987643
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.74 E-value=1.4e-16 Score=186.94 Aligned_cols=249 Identities=12% Similarity=0.109 Sum_probs=168.6
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCC-----EEEEEEeCCCCCEE
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGP-----VRGLEFNSFTPNLL 139 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~-----V~~l~fsp~~~~~l 139 (719)
....+++|++|+ .+|+++ ||.|++||+ .++ +....+..|... ..++.||| |+++|
T Consensus 17 ~~~~~~~w~~dg--------~~~~~~--~~~i~~~~~------~~~---~~~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l 76 (740)
T 4a5s_A 17 LKLYSLRWISDH--------EYLYKQ--ENNILVFNA------EYG---NSSVFLENSTFDEFGHSINDYSISP-DGQFI 76 (740)
T ss_dssp CCCCCEEECSSS--------EEEEEE--TTEEEEEET------TTC---CEEEEECTTTTTTCCSCCCEEEECT-TSSEE
T ss_pred ccccccEECCCC--------cEEEEc--CCcEEEEEC------CCC---ceEEEEechhhhhhcccccceEECC-CCCEE
Confidence 446689999998 688876 999999999 445 555556666532 23478899 88999
Q ss_pred EEEeCC---------CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeE
Q 046451 140 ASGADD---------GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVI 210 (719)
Q Consensus 140 asgs~d---------g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~ 210 (719)
+.++.+ +.+++||+.+++... + ..+...+...+|+|+|. .|+.+ .++.|++||+.+++...
T Consensus 77 ~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~----l----~~~~~~~~~~~~SPdG~-~la~~-~~~~i~~~~~~~~~~~~ 146 (740)
T 4a5s_A 77 LLEYNYVKQWRHSYTASYDIYDLNKRQLIT----E----ERIPNNTQWVTWSPVGH-KLAYV-WNNDIYVKIEPNLPSYR 146 (740)
T ss_dssp EEEEEEEECSSSCEEEEEEEEETTTTEECC----S----SCCCTTEEEEEECSSTT-CEEEE-ETTEEEEESSTTSCCEE
T ss_pred EEEECCeeeEEEccceEEEEEECCCCcEEE----c----ccCCCcceeeEECCCCC-EEEEE-ECCeEEEEECCCCceEE
Confidence 988876 567799999876432 1 22456799999999985 55655 46899999998877543
Q ss_pred EecCCCCCce-----------------eEEEECCCCCcEEEEEeCCCC--------------------------------
Q 046451 211 SFSESIKRRC-----------------SVLQWNPDVATQLVVASDEDS-------------------------------- 241 (719)
Q Consensus 211 ~~~~~~~~~i-----------------~~l~~sp~g~~~l~~~s~d~~-------------------------------- 241 (719)
....++...+ ..+.|||||+. |+..+.|..
T Consensus 147 lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~-la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~ 225 (740)
T 4a5s_A 147 ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF-LAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVN 225 (740)
T ss_dssp CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE-EEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCC
T ss_pred EcCCCCccceecCcccccccchhcCCCcceEECCCCCE-EEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcC
Confidence 2221222222 35899999965 444432221
Q ss_pred -CCcEEEEecCC---CCC-ceEEee------CCCCCeeEEEeCCCCCCeEEEEeC----CCcEEEEECCCCe----EEE-
Q 046451 242 -SPALRLWDMRN---TMS-PVKEFV------GHTKGVIAMSWCPNDSSYLLTCAK----DNRTICWDTVSGE----IVS- 301 (719)
Q Consensus 242 -~~~I~lwDl~~---~~~-~~~~~~------~h~~~V~~v~~sp~d~~~l~sgs~----Dg~I~iwd~~~~~----~~~- 301 (719)
...|++||+.+ +.. ....+. +|...+..++|+| |+++++.... +..|++||+.+++ +..
T Consensus 226 ~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp-dg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~ 304 (740)
T 4a5s_A 226 PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVA 304 (740)
T ss_dssp CEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGG
T ss_pred CeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC-CCeEEEEEeCCCCCEEEEEEEECCCCccccceeEE
Confidence 11588899876 421 233343 3777899999999 8886665543 3379999998887 221
Q ss_pred -Ee--cCCCCCeE-----EeEEcCCCCCEEEEEe-CCC--cEEEEeCCCCccccc
Q 046451 302 -EL--PAGTNWNF-----DIHWYPKIPGVISASS-FDG--KIGIYNIEGCSRYGV 345 (719)
Q Consensus 302 -~l--~~h~~~v~-----~l~~spdg~~~las~s-~Dg--~I~iwd~~~~~~~~~ 345 (719)
.+ ..|..+|. .+.|+|||..+++..+ .+| .|++||+.+++....
T Consensus 305 ~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~l 359 (740)
T 4a5s_A 305 RQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFI 359 (740)
T ss_dssp GCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEES
T ss_pred EEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEec
Confidence 12 45666665 7899999954442554 344 688889888766543
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.73 E-value=1.1e-16 Score=172.10 Aligned_cols=276 Identities=14% Similarity=0.130 Sum_probs=176.0
Q ss_pred eeeeecCCCCCCCCCccceEEEEcC-CCc--EEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC
Q 046451 68 NRLAWGKNGSGSEDFSLGLVAGGLV-DGS--IDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 68 ~~l~~sp~g~~~~~~~~~~lasgs~-dg~--I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
...+|+||| +.|+.++. +|. |.+||+ .++ +.......+...+..+.|++ +++.|+.++.
T Consensus 39 ~~~~~SpDg--------~~l~~~~~~~g~~~l~~~d~------~~g---~~~~lt~~~~~~~~~~~~sp-dg~~l~~~~~ 100 (388)
T 3pe7_A 39 YQKCFTRDG--------SKLLFGGAFDGPWNYYLLDL------NTQ---VATQLTEGRGDNTFGGFLSP-DDDALFYVKD 100 (388)
T ss_dssp TSCCBCTTS--------CEEEEEECTTSSCEEEEEET------TTC---EEEECCCSSCBCSSSCEECT-TSSEEEEEET
T ss_pred cCccCCCCC--------CEEEEEEcCCCCceEEEEeC------CCC---ceEEeeeCCCCCccceEEcC-CCCEEEEEeC
Confidence 348999998 56776665 674 777887 334 44444555655666789999 8899999999
Q ss_pred CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEE--ecCCCCcEEEEE----------------------eCCCcEEE
Q 046451 145 DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVS--WNSKVQHILAST----------------------SYNGTTVV 200 (719)
Q Consensus 145 dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~--~sp~g~~~l~s~----------------------s~dg~I~i 200 (719)
++.|++||+.+++....+ . .+...+.... +++++. +++.. ..+..|++
T Consensus 101 ~~~l~~~d~~~g~~~~~~---~----~~~~~~~~~~~~~~~dg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (388)
T 3pe7_A 101 GRNLMRVDLATLEENVVY---Q----VPAEWVGYGTWVANSDCT-KLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMR 172 (388)
T ss_dssp TTEEEEEETTTCCEEEEE---E----CCTTEEEEEEEEECTTSS-EEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEE
T ss_pred CCeEEEEECCCCcceeee---e----chhhcccccceeECCCCC-eeccccccCcccccccccchhhhhhccCCcceEEE
Confidence 999999999987654321 1 1223343333 478874 55532 23468999
Q ss_pred EECCCCceeEEecCCCCCceeEEEECC-CCCcEEEEEeCCC---CCCcEEEEecCCCCCceEEeeCCC--CCeeEEEeCC
Q 046451 201 WDLKKQKPVISFSESIKRRCSVLQWNP-DVATQLVVASDED---SSPALRLWDMRNTMSPVKEFVGHT--KGVIAMSWCP 274 (719)
Q Consensus 201 wd~~~~~~~~~~~~~~~~~i~~l~~sp-~g~~~l~~~s~d~---~~~~I~lwDl~~~~~~~~~~~~h~--~~V~~v~~sp 274 (719)
||+.+++...... +...+..++|+| ||+. |+....+. ....|.++|+... ....+..+. ..+..++|+|
T Consensus 173 ~d~~~g~~~~l~~--~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~~~~~~~~~sp 247 (388)
T 3pe7_A 173 VDLKTGESTVILQ--ENQWLGHPIYRPYDDST-VAFCHEGPHDLVDARMWLINEDGT--NMRKVKTHAEGESCTHEFWVP 247 (388)
T ss_dssp EETTTCCEEEEEE--ESSCEEEEEEETTEEEE-EEEEECSCTTTSSCSEEEEETTSC--CCEESCCCCTTEEEEEEEECT
T ss_pred EECCCCceEEeec--CCccccccEECCCCCCE-EEEEEecCCCCCcceEEEEeCCCC--ceEEeeeCCCCcccccceECC
Confidence 9999887654443 566789999999 9854 44444321 1236888887643 234454444 3577899999
Q ss_pred CCCCeEEEEeC-CC----cEEEEECCCCeE--EEEecCCCCC---eEEeEEcCCCCCEEEEE--------eCCCcEEEEe
Q 046451 275 NDSSYLLTCAK-DN----RTICWDTVSGEI--VSELPAGTNW---NFDIHWYPKIPGVISAS--------SFDGKIGIYN 336 (719)
Q Consensus 275 ~d~~~l~sgs~-Dg----~I~iwd~~~~~~--~~~l~~h~~~---v~~l~~spdg~~~las~--------s~Dg~I~iwd 336 (719)
|++.|+..+. ++ .|++||+.+++. +..+.++... ...+.|+|||..++++. ..+..|++||
T Consensus 248 -dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d 326 (388)
T 3pe7_A 248 -DGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326 (388)
T ss_dssp -TSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEE
T ss_pred -CCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEe
Confidence 8886655443 22 399999998874 3333331110 12247999996555443 4567999999
Q ss_pred CCCCcccccCCCCCCCCCccCcceec-------CCCceeeeeCCcEEEEccCCC
Q 046451 337 IEGCSRYGVGDSNFSAAPLRAPKWYK-------RPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~p~w~~-------~~~~~s~s~~Gklv~~~~~~~ 383 (719)
+.+++......+.. .|.. ....++|++||+.++|..+..
T Consensus 327 ~~~~~~~~l~~~~~--------~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~ 372 (388)
T 3pe7_A 327 MKNGTQHRVARHDT--------SWKVFEGDRQVTHPHPSFTPDDKQILFTSDVH 372 (388)
T ss_dssp TTTTEEEEEEECCC--------CCCCBTTBSSTTCCCCEECTTSSEEEEEECTT
T ss_pred ccCCceEEeccccC--------cccccccccccCCCCccCCCCCCEEEEEecCC
Confidence 99987644322221 1110 234578999999888876543
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.71 E-value=1.5e-15 Score=162.53 Aligned_cols=254 Identities=9% Similarity=0.045 Sum_probs=161.9
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEee-ccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc-
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLD-FQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG- 85 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~-~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~- 85 (719)
..+..++|+|||++|++++.+ .+.+|+++ .+... .+.. ....+.+.+++|++++ +
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-----------~v~~~~~~~~g~~~---~~~~-~~~~g~~~~~~~spdg--------~~ 96 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-----------KWSSFAVKSPTEIV---HEAS-HPIGGHPRANDADTNT--------RA 96 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-----------EEEEEEEEETTEEE---EEEE-EECCSSGGGGCTTSCC--------EE
T ss_pred CCCcEEEECCCCCEEEEEccc-----------eEEEEEECCCCCEE---EeeE-eecCCCCccEEECCCC--------CE
Confidence 367899999999999888754 34889986 33211 1111 1111346789999998 5
Q ss_pred -eEEEEc-------------CCCcEEEEcCCccccCCCCCCCCceeeec----cccCCEEEEEEeCCCCCEEEEEeC-CC
Q 046451 86 -LVAGGL-------------VDGSIDIWNPLSLISSGETGGNPLIAHLS----RHKGPVRGLEFNSFTPNLLASGAD-DG 146 (719)
Q Consensus 86 -~lasgs-------------~dg~I~lwd~~~~~~~~~~~~~~~~~~l~----~h~~~V~~l~fsp~~~~~lasgs~-dg 146 (719)
++++++ .+|.+.+|++.. ++ +....+. .+...+.+++|++ ++++|++++. ++
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~-----~g---~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~ 167 (365)
T 1jof_A 97 IFLLAAKQPPYAVYANPFYKFAGYGNVFSVSE-----TG---KLEKNVQNYEYQENTGIHGMVFDP-TETYLYSADLTAN 167 (365)
T ss_dssp EEEEECSSTTCCEEEEEESSSCCEEEEEEECT-----TC---CEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTT
T ss_pred EEEEEecCCcceeccceeecCCceEEEEccCC-----CC---cCcceEeeEEeCCCCcceEEEECC-CCCEEEEEcCCCC
Confidence 345553 689999999841 23 3322222 2456799999999 7887777654 68
Q ss_pred cEEEEcCC-CCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe-CCCcEEEEECC--CCceeE---EecC---C-
Q 046451 147 EICIWDLS-APAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS-YNGTTVVWDLK--KQKPVI---SFSE---S- 215 (719)
Q Consensus 147 ~I~iwdl~-~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s-~dg~I~iwd~~--~~~~~~---~~~~---~- 215 (719)
.|++||+. +++.. .+..+.. ..+...+..++|+++|+ +|++++ .+++|.+|++. +++... .+.. .
T Consensus 168 ~v~~~~~~~~g~~~-~~~~~~~--~~~g~~p~~~~~spdg~-~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 243 (365)
T 1jof_A 168 KLWTHRKLASGEVE-LVGSVDA--PDPGDHPRWVAMHPTGN-YLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI 243 (365)
T ss_dssp EEEEEEECTTSCEE-EEEEEEC--SSTTCCEEEEEECTTSS-EEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC
T ss_pred EEEEEEECCCCCEE-EeeeEec--CCCCCCCCEeEECCCCC-EEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCc
Confidence 99999998 54421 1100110 11244689999999985 555555 57899999875 454321 2221 1
Q ss_pred --CCC------ceeEEE-ECCCCCcEEEEEeCCC--CCCcEEEEecCCCCCceE---EeeCCCCCeeEEEeCCC--CCCe
Q 046451 216 --IKR------RCSVLQ-WNPDVATQLVVASDED--SSPALRLWDMRNTMSPVK---EFVGHTKGVIAMSWCPN--DSSY 279 (719)
Q Consensus 216 --~~~------~i~~l~-~sp~g~~~l~~~s~d~--~~~~I~lwDl~~~~~~~~---~~~~h~~~V~~v~~sp~--d~~~ 279 (719)
+.. .+..++ |++||+.++++...++ ..+.|.+||+....+... .+..+...+..++|+|. |+++
T Consensus 244 ~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~ 323 (365)
T 1jof_A 244 PDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEW 323 (365)
T ss_dssp CCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTE
T ss_pred CCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCE
Confidence 111 588999 9999975544433221 012699999963333322 23335556778899995 5788
Q ss_pred EEEEeC-CCcEEEEECCCC
Q 046451 280 LLTCAK-DNRTICWDTVSG 297 (719)
Q Consensus 280 l~sgs~-Dg~I~iwd~~~~ 297 (719)
|++++. ++.|.||++...
T Consensus 324 l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 324 MAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEECSSSCEEEEEEEETT
T ss_pred EEEEEcCCCeEEEEEEchh
Confidence 888876 489999998765
No 167
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.71 E-value=2.4e-16 Score=169.70 Aligned_cols=288 Identities=9% Similarity=-0.013 Sum_probs=173.6
Q ss_pred cceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 10 SASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 10 V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
+.+++|||||++||.....+ ....|.+||++.++.. .+ ..........+.|++|+ +.|+.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~-------g~~~l~~~d~~~~~~~---~l--~~~~~~~~~~~~~spdg--------~~l~~ 97 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFD-------GNRNYYLLNLETQQAV---QL--TEGKGDNTFGGFISTDE--------RAFFY 97 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTT-------SSCEEEEEETTTTEEE---EC--CCSSCBCTTTCEECTTS--------SEEEE
T ss_pred eecCcCCCCCCEEEEEEecC-------CCceEEEEECCCCcEE---Ee--ecCCCCccccceECCCC--------CEEEE
Confidence 78899999999988775431 1234566776643211 11 11122233458899998 78888
Q ss_pred EcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEE-------------------EEEeCCCCCEEEEE-----eCC
Q 046451 90 GLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRG-------------------LEFNSFTPNLLASG-----ADD 145 (719)
Q Consensus 90 gs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~-------------------l~fsp~~~~~lasg-----s~d 145 (719)
++.++.|++||+. .+ +....+..+...... +.|++ +++.++.+ ..+
T Consensus 98 ~~~~~~l~~~d~~------~~---~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~ 167 (396)
T 3c5m_A 98 VKNELNLMKVDLE------TL---EEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPT 167 (396)
T ss_dssp EETTTEEEEEETT------TC---CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCC
T ss_pred EEcCCcEEEEECC------CC---CcEEEEecccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCc
Confidence 8888899999983 33 333333323332222 34566 55555443 456
Q ss_pred CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecC-CCCcEEEEEeCC------CcEEEEECCCCceeEEecCCC-C
Q 046451 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNS-KVQHILASTSYN------GTTVVWDLKKQKPVISFSESI-K 217 (719)
Q Consensus 146 g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp-~g~~~l~s~s~d------g~I~iwd~~~~~~~~~~~~~~-~ 217 (719)
..|++||+.+++.... . .+...+..+.|++ ++. .|+..+.+ ..|.+||+..++.. .+.... .
T Consensus 168 ~~l~~~d~~~g~~~~~---~-----~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~ 237 (396)
T 3c5m_A 168 CRLIKVDIETGELEVI---H-----QDTAWLGHPIYRPFDDS-TVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEG 237 (396)
T ss_dssp EEEEEEETTTCCEEEE---E-----EESSCEEEEEEETTEEE-EEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTT
T ss_pred ceEEEEECCCCcEEee---c-----cCCcccccceECCCCCC-EEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCC
Confidence 7899999987654322 1 1344788999999 664 45554433 46889998765533 333121 3
Q ss_pred CceeEEEECCCCCcEEEEEeCCCC-CCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe------------
Q 046451 218 RRCSVLQWNPDVATQLVVASDEDS-SPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA------------ 284 (719)
Q Consensus 218 ~~i~~l~~sp~g~~~l~~~s~d~~-~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs------------ 284 (719)
..+..++|+++|+.+++++..++. .+.|++||+.++. . ..+.... ... +.|++.|+++|++++
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~-~-~~l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~ 313 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE-N-EEVMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADS 313 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC-E-EEEEECC-SEE-EEEECSSSSEEEEEECCC---------
T ss_pred ccccceEECCCCCEEEEEecCCCCccceEEEEECCCCC-e-EEeeeCC-CCC-CCccCCCCceEEEecCCcceeeccccc
Confidence 467889999999765555444321 1149999997653 2 2222111 233 889873556777654
Q ss_pred ----CCCcEEEEECCCCeEEEEecCCCC-----------CeEEeEEcCCCCCEEEEEeCCCcEEEEe--CCCCcc
Q 046451 285 ----KDNRTICWDTVSGEIVSELPAGTN-----------WNFDIHWYPKIPGVISASSFDGKIGIYN--IEGCSR 342 (719)
Q Consensus 285 ----~Dg~I~iwd~~~~~~~~~l~~h~~-----------~v~~l~~spdg~~~las~s~Dg~I~iwd--~~~~~~ 342 (719)
.++.|++||+.+++.. .+..+.. .+..+.|++||..+++++..++...||. +.++..
T Consensus 314 ~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 314 YNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp -CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred cccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence 3478999999887653 3434433 2567899999954445555566655554 444443
No 168
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.70 E-value=6.7e-15 Score=154.86 Aligned_cols=272 Identities=11% Similarity=0.105 Sum_probs=181.7
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
...|.+++|++++..++....++.+ ++|.-. .+ .....+...+.+++|++++ ++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~------~~--~~~~~~~~~~~~~~~~~~g--------~l 58 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESEL----------QTITAE------PW--LEISKKGLQLEGLNFDRQG--------QL 58 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGS----------CEEECE------EE--EEEESSCCCEEEEEECTTS--------CE
T ss_pred ccccceeeecCCccceeEEeecccC----------cccccc------ee--EEEeccCccccCcEECCCC--------CE
Confidence 4568899999999888777666655 445211 01 1112244567899999987 67
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC----CcEEEEcCCCCCCCCcc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD----GEICIWDLSAPAEPSHF 162 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d----g~I~iwdl~~~~~~~~~ 162 (719)
++++..++.|.+||.. ++ +.......+...+.+++|++ +++++++...+ +.|.+||..+......+
T Consensus 59 ~~~~~~~~~i~~~d~~------~~---~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~ 128 (333)
T 2dg1_A 59 FLLDVFEGNIFKINPE------TK---EIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDII 128 (333)
T ss_dssp EEEETTTCEEEEECTT------TC---CEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEEE
T ss_pred EEEECCCCEEEEEeCC------CC---cEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE
Confidence 7788889999999983 33 33333334667899999998 67877777666 68999998876543221
Q ss_pred CCccCCCCCCCCCeEEEEecCCCCcEEEEEeC------CCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEE
Q 046451 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSY------NGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVA 236 (719)
Q Consensus 163 ~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~------dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~ 236 (719)
.. ......+.+++++++| +++++... .+.|..||..+++...... ....+..++|+++++.++++.
T Consensus 129 ---~~--~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~i~~~~dg~~l~v~~ 200 (333)
T 2dg1_A 129 ---ED--LSTAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--NISVANGIALSTDEKVLWVTE 200 (333)
T ss_dssp ---CS--SSSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--EESSEEEEEECTTSSEEEEEE
T ss_pred ---cc--CccCCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCCEEEEeec--CCCcccceEECCCCCEEEEEe
Confidence 11 1123478999999997 46665543 3567777766554433222 334578899999986555665
Q ss_pred eCCCCCCcEEEEecCCCCCceEE--------eeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCC
Q 046451 237 SDEDSSPALRLWDMRNTMSPVKE--------FVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTN 308 (719)
Q Consensus 237 s~d~~~~~I~lwDl~~~~~~~~~--------~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~ 308 (719)
..++ .|++||+++....+.. +.++ ..+..+++++ +++++++...++.|.+||. +++.+..+..+..
T Consensus 201 ~~~~---~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~-~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~ 274 (333)
T 2dg1_A 201 TTAN---RLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDS-DDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGR 274 (333)
T ss_dssp GGGT---EEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBT-TCCEEEEEETTTEEEEECT-TSCEEEEEECTTG
T ss_pred CCCC---eEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECC-CCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCC
Confidence 5555 8999999643222221 1122 4678899999 8888887778899999998 5777777654433
Q ss_pred ------CeEEeEEcCCCCCEEEEEeC
Q 046451 309 ------WNFDIHWYPKIPGVISASSF 328 (719)
Q Consensus 309 ------~v~~l~~spdg~~~las~s~ 328 (719)
.+.+++|++|+..+++++..
T Consensus 275 ~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 275 DEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp GGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ccccccCcceEEECCCCCEEEEEeCc
Confidence 68999999997444444443
No 169
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.70 E-value=4.5e-15 Score=173.44 Aligned_cols=299 Identities=9% Similarity=-0.002 Sum_probs=192.4
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCccccee---ecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLL---VGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~---~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.++.+. +|||++++....++. ...-.||..+......+..+ .-..++...+..++|||||
T Consensus 74 ~~~~~p--~~dG~~~~~~~~~~~-------~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg-------- 136 (710)
T 2xdw_A 74 PKYSCH--FKKGKRYFYFYNTGL-------QNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDG-------- 136 (710)
T ss_dssp CEECCC--EEETTEEEEEEECSS-------CSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTS--------
T ss_pred ccCCCC--EEECCEEEEEEEcCC-------ceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCC--------
Confidence 344444 389999887654431 11123555543222211111 0012233468899999998
Q ss_pred ceEEEEcCC-C----cEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCc------------
Q 046451 85 GLVAGGLVD-G----SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGE------------ 147 (719)
Q Consensus 85 ~~lasgs~d-g----~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~------------ 147 (719)
++|+.++.+ | .|++||+. ++ +....... ...+..++|++ |++.|+.++.++.
T Consensus 137 ~~la~~~~~~G~~~~~i~v~d~~------tg---~~~~~~~~-~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 137 EYFAYGLSASGSDWVTIKFMKVD------GA---KELPDVLE-RVKFSCMAWTH-DGKGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp SEEEEEEEETTCSCEEEEEEETT------TT---EEEEEEEE-EECSCCEEECT-TSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred CEEEEEEcCCCCceEEEEEEECC------CC---CCCccccc-CcccceEEEEe-CCCEEEEEEECCccccccccccccC
Confidence 577765543 3 89999993 34 33332222 22367899999 7888888887766
Q ss_pred ----EEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC-----CCcEEEEECCC------Cc-eeEE
Q 046451 148 ----ICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY-----NGTTVVWDLKK------QK-PVIS 211 (719)
Q Consensus 148 ----I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~-----dg~I~iwd~~~------~~-~~~~ 211 (719)
|++|++.++..... +......+...+..+.|+++|+ +|+.++. +..|++||+.+ +. ....
T Consensus 206 ~~~~v~~~~l~t~~~~~~---~v~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQSEDI---LCAEFPDEPKWMGGAELSDDGR-YVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCEEEEEETTSCGGGCE---EEECCTTCTTCEEEEEECTTSC-EEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred CCCEEEEEECCCCcccce---EEeccCCCCeEEEEEEEcCCCC-EEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 99999987653211 1111122445678999999986 5554443 56899999986 43 3444
Q ss_pred ecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC-ceEEeeCCCC--CeeEEEeCCCCCCeEEEEeCCCc
Q 046451 212 FSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS-PVKEFVGHTK--GVIAMSWCPNDSSYLLTCAKDNR 288 (719)
Q Consensus 212 ~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~-~~~~~~~h~~--~V~~v~~sp~d~~~l~sgs~Dg~ 288 (719)
+. .+...+.. .|+++|+.+++.+..+.....|.+||+.+... ....+..|.. .+..++|++ ++.++++...|+.
T Consensus 282 l~-~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~lv~~~~~~g~ 358 (710)
T 2xdw_A 282 LI-DNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVR-SNFLVLCYLHDVK 358 (710)
T ss_dssp EE-CSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEET-TTEEEEEEEETTE
T ss_pred ee-CCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEc-CCEEEEEEEECCE
Confidence 54 34444444 58888876666655443345799999976531 2355555544 577899986 7788888888884
Q ss_pred --EEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeC---CCcEEEEeCCCCc
Q 046451 289 --TICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSF---DGKIGIYNIEGCS 341 (719)
Q Consensus 289 --I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~---Dg~I~iwd~~~~~ 341 (719)
|.+||+.+|+.+..+..+...+..+.+++++..++++.+. .++|++||+.+++
T Consensus 359 ~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 359 NTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 5667887888888888787788999999998555555443 4789999998876
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.69 E-value=9.4e-15 Score=169.12 Aligned_cols=291 Identities=11% Similarity=0.007 Sum_probs=182.6
Q ss_pred ccCccceEEEcCCCCeEEEe--eccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCce---------eeeec-
Q 046451 6 GINRSASVAFAPDAPYMAAG--TMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFN---------RLAWG- 73 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latg--s~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~---------~l~~s- 73 (719)
+...+..++|++++-+++.. +.++ ...||....+.....+ ..+...+. .+.|+
T Consensus 22 ~~~~~~~~~~s~~~~~~~~~~~~~~~----------~~~l~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~ 86 (662)
T 3azo_A 22 RSGRPACVGAVGDEVWWVAPRPAEAG----------RATLVRRRADGAEESA-----LPAPWNVRNRVFEYSGFPWAGVP 86 (662)
T ss_dssp TCSCCEEEEEETTEEEEEEEETTTTT----------EEEEEEECTTSCEEES-----SCTTCCBCCCGGGTCCCCEEEEC
T ss_pred cCCccceeEEcCCeEEEEecCcccCC----------cEEEEEECCCCCccee-----CCCCccccccccccCCccceeee
Confidence 45678899999876666655 3344 3477776433222211 22333444 55565
Q ss_pred -CCCCCCCCCccce-EEEEc-CCCcEEEEcCCccccCCC-CCCCCceeeecc-----ccCCEEEEEEeCCCCCEEEEEeC
Q 046451 74 -KNGSGSEDFSLGL-VAGGL-VDGSIDIWNPLSLISSGE-TGGNPLIAHLSR-----HKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 74 -p~g~~~~~~~~~~-lasgs-~dg~I~lwd~~~~~~~~~-~~~~~~~~~l~~-----h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
||+ +. |+.++ .+..|.+|++.. .. + . ...+.. |...+.+++|+| |++.|++++.
T Consensus 87 SPDg--------~~~la~~~~~~~~l~~~~~~~----~g~~---~-~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~ 149 (662)
T 3azo_A 87 RPAG--------GPLLVFTHFGDQRLYAFEPDA----PGGA---V-PRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAE 149 (662)
T ss_dssp CSSS--------SCEEEEEBTTTCCEEEECTTS----TTCC---C-CEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEE
T ss_pred ecCC--------CeEEEEEECCCCeEEEEcCCC----CCCC---C-CEeccCCccCCCCccccCcEECC-CCCEEEEEEe
Confidence 888 45 55544 456777777620 01 1 2 233333 567788999999 8888988887
Q ss_pred C----------CcEEEEcCCC------CCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC--------CcEEE
Q 046451 145 D----------GEICIWDLSA------PAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN--------GTTVV 200 (719)
Q Consensus 145 d----------g~I~iwdl~~------~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d--------g~I~i 200 (719)
| ..|++||+.+ +.. .. +. ..+...+..++|+++|+ .|+.++.+ ..|++
T Consensus 150 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~---l~---~~~~~~~~~~~~SpDG~-~la~~~~~~~~~~~~~~~i~~ 221 (662)
T 3azo_A 150 EFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RE---LS---DDAHRFVTGPRLSPDGR-QAVWLAWDHPRMPWEGTELKT 221 (662)
T ss_dssp EECSSSTTCEEEEEEEEETTSTTTTCGGGS-EE---SS---CSCSSEECCCEECTTSS-EEEEEEECTTCCTTTCEEEEE
T ss_pred cccCCCCCCceeEEEEEECCCCccccCCce-eE---EE---ecCCCcccCceECCCCC-EEEEEECCCCCCCCCCcEEEE
Confidence 6 5899999987 332 22 11 02334678899999985 66655544 47999
Q ss_pred EECC-CC--ceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCC---------ee
Q 046451 201 WDLK-KQ--KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKG---------VI 268 (719)
Q Consensus 201 wd~~-~~--~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~---------V~ 268 (719)
||+. ++ .....+...+...+..++|++||+ +++++..++ ...|++||+.++ + ...+..+... +.
T Consensus 222 ~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~-~~~l~~~~~~~~-~-~~~l~~~~~~~~~p~w~~~~~ 297 (662)
T 3azo_A 222 ARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTG-WWNLHRVDPATG-A-ATQLCRREEEFAGPLWTPGMR 297 (662)
T ss_dssp EEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTS-SCEEEEECTTTC-C-EEESSCCSSBSSCCCCSTTCC
T ss_pred EEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCC-CeEEEEEECCCC-c-eeecccccccccCccccccCc
Confidence 9999 56 133344324567899999999997 666666554 225666676443 3 2333322221 56
Q ss_pred EEEeCCCCCCeEEEEeCCCcEEEE--ECCCCeEEEEecCCCCCeEEe-EEcCCCCCEEEEEeCCC--cEEEEeCCCCccc
Q 046451 269 AMSWCPNDSSYLLTCAKDNRTICW--DTVSGEIVSELPAGTNWNFDI-HWYPKIPGVISASSFDG--KIGIYNIEGCSRY 343 (719)
Q Consensus 269 ~v~~sp~d~~~l~sgs~Dg~I~iw--d~~~~~~~~~l~~h~~~v~~l-~~spdg~~~las~s~Dg--~I~iwd~~~~~~~ 343 (719)
+++|++ ++.++++++. +.++|| |+.+++ +..+..|...+..+ +++.+. .++++++.+. .|.+||+.+++..
T Consensus 298 ~~~~~~-~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 298 WFAPLA-NGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTR-AVGVAASPRTAYEVVELDTVTGRAR 373 (662)
T ss_dssp SEEECT-TSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTE-EEEEEEETTEEEEEEEEETTTCCEE
T ss_pred eEeEeC-CCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCE-EEEEEcCCCCCCEEEEEECCCCceE
Confidence 788888 8889999988 999999 665565 67787787777777 554443 3444455554 4556677677654
Q ss_pred c
Q 046451 344 G 344 (719)
Q Consensus 344 ~ 344 (719)
.
T Consensus 374 ~ 374 (662)
T 3azo_A 374 T 374 (662)
T ss_dssp E
T ss_pred E
Confidence 3
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.69 E-value=2.8e-14 Score=150.27 Aligned_cols=251 Identities=14% Similarity=0.123 Sum_probs=181.8
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcCC------------------------CcEEEEcCCccccCCCCCCCCceeee
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLVD------------------------GSIDIWNPLSLISSGETGGNPLIAHL 119 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~d------------------------g~I~lwd~~~~~~~~~~~~~~~~~~l 119 (719)
-..+.+|+++++| +++++...+ +.|.+||. .++ +.+..+
T Consensus 23 l~~v~~va~d~~G--------~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~------~~g---~~~~~~ 85 (329)
T 3fvz_A 23 PGQVSGVALDSKN--------NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDP------NNA---EILQSS 85 (329)
T ss_dssp CSCEEEEEECTTC--------CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECT------TTC---CEEEEE
T ss_pred cCCceEEEECCCC--------CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEEC------CCC---eEEecc
Confidence 4678999999998 688877766 47999997 334 444444
Q ss_pred c-cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCC-CCCccCCc--cCCCCCCCCCeEEEEecCCCCcEEEEEe-C
Q 046451 120 S-RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPA-EPSHFPPL--RGNGSAAQGEISFVSWNSKVQHILASTS-Y 194 (719)
Q Consensus 120 ~-~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~-~~~~~~~l--~~~~~~h~~~I~~l~~sp~g~~~l~s~s-~ 194 (719)
. .+.....+|+|++ +++++++...++.|++||..... .+..+... .+....+......|++++++..++++.+ .
T Consensus 86 ~~~~~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~ 164 (329)
T 3fvz_A 86 GKNLFYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC 164 (329)
T ss_dssp CTTTCSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS
T ss_pred CCCccCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC
Confidence 3 3456789999998 78888888889999999986542 22221100 0111233447899999994346777776 6
Q ss_pred CCcEEEEECCCCceeEEecC---------CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEee--CC
Q 046451 195 NGTTVVWDLKKQKPVISFSE---------SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFV--GH 263 (719)
Q Consensus 195 dg~I~iwd~~~~~~~~~~~~---------~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~--~h 263 (719)
++.|++|| .+++.+..+.. ..-.....|++++++..++++...++ .|++||..++ +.+..+. .+
T Consensus 165 ~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~---~I~~~~~~~G-~~~~~~~~~~~ 239 (329)
T 3fvz_A 165 NSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG---RIQCFKTDTK-EFVREIKHASF 239 (329)
T ss_dssp CCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT---EEEEEETTTC-CEEEEECCTTT
T ss_pred CCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC---EEEEEECCCC-cEEEEEecccc
Confidence 89999999 55776666641 12234789999999556777776666 8999999754 5566653 45
Q ss_pred CCCeeEEEeCCCCCCeEEEE-------eCCCcEEEEECCCCeEEEEec---CCCCCeEEeEEcCCCCCEEEEEeCCCcEE
Q 046451 264 TKGVIAMSWCPNDSSYLLTC-------AKDNRTICWDTVSGEIVSELP---AGTNWNFDIHWYPKIPGVISASSFDGKIG 333 (719)
Q Consensus 264 ~~~V~~v~~sp~d~~~l~sg-------s~Dg~I~iwd~~~~~~~~~l~---~h~~~v~~l~~spdg~~~las~s~Dg~I~ 333 (719)
...+..++|+| +..+.+. ..++.|++||+.+++.+..+. .+...+.+|+|+++| .++++...+++|+
T Consensus 240 ~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~~I~ 316 (329)
T 3fvz_A 240 GRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTNTVW 316 (329)
T ss_dssp TTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSCCEE
T ss_pred CCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCCEEE
Confidence 56788899987 2333333 334589999999999998873 677789999999999 8999999999999
Q ss_pred EEeCCCC
Q 046451 334 IYNIEGC 340 (719)
Q Consensus 334 iwd~~~~ 340 (719)
+|+++..
T Consensus 317 ~~~~~~~ 323 (329)
T 3fvz_A 317 KFTLTEK 323 (329)
T ss_dssp EEEEEEC
T ss_pred EEeCCcc
Confidence 9998753
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.68 E-value=1.9e-14 Score=148.04 Aligned_cols=243 Identities=12% Similarity=0.122 Sum_probs=174.3
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec------cccCCEEEEEEeCCCC
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS------RHKGPVRGLEFNSFTP 136 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~------~h~~~V~~l~fsp~~~ 136 (719)
+-....++++++++ .++++...++.|.+||.. + ..+..+. .+...+.+++++..++
T Consensus 28 ~~~~p~~v~~~~~g--------~l~v~~~~~~~i~~~d~~-------g---~~~~~~~~~~~~~~~~~~p~~i~~~~~~g 89 (286)
T 1q7f_A 28 QFTEPSGVAVNAQN--------DIIVADTNNHRIQIFDKE-------G---RFKFQFGECGKRDSQLLYPNRVAVVRNSG 89 (286)
T ss_dssp CBSCEEEEEECTTC--------CEEEEEGGGTEEEEECTT-------S---CEEEEECCBSSSTTCBSSEEEEEEETTTT
T ss_pred ccCCCceEEECCCC--------CEEEEECCCCEEEEECCC-------C---cEEEEecccCCCcccccCceEEEEEcCCC
Confidence 44568899999987 688888889999999973 2 3333332 3446789999954256
Q ss_pred CEEEEEeC-CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-
Q 046451 137 NLLASGAD-DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE- 214 (719)
Q Consensus 137 ~~lasgs~-dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~- 214 (719)
+++++... ++.|++||. +++....+ . ..+...+.+++++++| +++++...++.|++||.. ++.+..+..
T Consensus 90 ~l~v~~~~~~~~i~~~d~-~g~~~~~~---~---~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~ 160 (286)
T 1q7f_A 90 DIIVTERSPTHQIQIYNQ-YGQFVRKF---G---ATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQN-GNVLHKFGCS 160 (286)
T ss_dssp EEEEEECGGGCEEEEECT-TSCEEEEE---C---TTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEEECT
T ss_pred eEEEEcCCCCCEEEEECC-CCcEEEEe---c---CccCCCceEEEEeCCC-CEEEEECCCCEEEEEcCC-CCEEEEeCCC
Confidence 66665543 889999994 44433222 1 1233468999999997 577777788999999965 555555532
Q ss_pred CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCC--CCCeeEEEeCCCCCCeEEEEeCCC-cEEE
Q 046451 215 SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGH--TKGVIAMSWCPNDSSYLLTCAKDN-RTIC 291 (719)
Q Consensus 215 ~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h--~~~V~~v~~sp~d~~~l~sgs~Dg-~I~i 291 (719)
.+...+..|+++++|. ++++...++ .|++||... ..+..+..+ ...+..|++++ +++++++...++ .|.+
T Consensus 161 ~~~~~p~~i~~~~~g~-l~v~~~~~~---~i~~~~~~g--~~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~ 233 (286)
T 1q7f_A 161 KHLEFPNGVVVNDKQE-IFISDNRAH---CVKVFNYEG--QYLRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTI 233 (286)
T ss_dssp TTCSSEEEEEECSSSE-EEEEEGGGT---EEEEEETTC--CEEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEE
T ss_pred CccCCcEEEEECCCCC-EEEEECCCC---EEEEEcCCC--CEEEEEccCCccCCCcEEEECC-CCCEEEEeCCCCEEEEE
Confidence 2345689999999984 666666565 899999743 445555433 36789999999 888888887776 9999
Q ss_pred EECCCCeEEEEecCCC--CCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 292 WDTVSGEIVSELPAGT--NWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 292 wd~~~~~~~~~l~~h~--~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
||. +++.+..+..+. ..+.+++|+++| .++++ +.|++|++|++.....
T Consensus 234 ~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g-~l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 234 FTQ-DGQLISALESKVKHAQCFDVALMDDG-SVVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp ECT-TSCEEEEEEESSCCSCEEEEEEETTT-EEEEE-ETTTEEEEEECSCCCC
T ss_pred ECC-CCCEEEEEcccCCCCcceeEEECCCC-cEEEE-CCCCeEEEEEcccccc
Confidence 996 567776665543 347899999999 67777 5699999999876543
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.68 E-value=3.2e-15 Score=159.74 Aligned_cols=280 Identities=9% Similarity=0.015 Sum_probs=180.4
Q ss_pred CCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEc-----
Q 046451 17 PDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGL----- 91 (719)
Q Consensus 17 pdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs----- 91 (719)
+|++++.+...... ...++.+.+||...++....+. ... .- .++|++++ ++|++++
T Consensus 13 ~~~~~~yv~~~~~~----~~~d~~v~v~D~~t~~~~~~i~-----~g~-~p-~i~~spdg--------~~lyv~~~~~~~ 73 (361)
T 2oiz_A 13 PQENRIYVMDSVFM----HLTESRVHVYDYTNGKFLGMVP-----TAF-NG-HVQVSNDG--------KKIYTMTTYHER 73 (361)
T ss_dssp CGGGEEEEEECCGG----GGGGCEEEEEETTTCCEEEEEE-----CCE-EE-EEEECTTS--------SEEEEEEEEETT
T ss_pred CCCCEEEEECCCCC----ccccCeEEEEECCCCeEEEEec-----CCC-CC-ceEECCCC--------CEEEEEEecccc
Confidence 36666665542110 0135567899876554322221 122 22 89999998 6777765
Q ss_pred -----CCCcEEEEcCCccccCCCCCCCCceeeecc------ccCCEEEEEEeCCCCCEEEEEeC--CCcEEEEcCCCCCC
Q 046451 92 -----VDGSIDIWNPLSLISSGETGGNPLIAHLSR------HKGPVRGLEFNSFTPNLLASGAD--DGEICIWDLSAPAE 158 (719)
Q Consensus 92 -----~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~------h~~~V~~l~fsp~~~~~lasgs~--dg~I~iwdl~~~~~ 158 (719)
.++.|.+||+ .+. +.+..+.. +......++|++ ++++|+++.. ++.|.+||+.+.+.
T Consensus 74 ~~~g~~~~~v~v~d~------~t~---~~~~~i~~~~~~~~~g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 74 ITRGKRSDVVEVWDA------DKL---TFEKEISLPPKRVQGLNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDY 143 (361)
T ss_dssp SSSSCEEEEEEEEET------TTC---CEEEEEEECTTBCCBCCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEE
T ss_pred cccCCCCCEEEEEEC------cCC---cEEEEEEcCccccccCCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcE
Confidence 3677999998 333 45555442 234567899999 7888888764 68999999998765
Q ss_pred CCc-cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC-CceeEEec-----CCCCCceeEEEECCCCCc
Q 046451 159 PSH-FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK-QKPVISFS-----ESIKRRCSVLQWNPDVAT 231 (719)
Q Consensus 159 ~~~-~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~-~~~~~~~~-----~~~~~~i~~l~~sp~g~~ 231 (719)
+.. +. . .....+.+.+++...+++.+.||.+.+|++.. ++...... ...... ..+.+++++..
T Consensus 144 ~~~~i~-~--------~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~ 213 (361)
T 2oiz_A 144 VEDVTA-A--------AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP-IFIAPALDKDK 213 (361)
T ss_dssp EEEEGG-G--------TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC-BCSCCEECSSE
T ss_pred EEEEec-C--------CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc-eEEEecccCCE
Confidence 433 21 0 12233567787767888999999999999875 44431111 011111 22334566644
Q ss_pred EEEEEeCCCCCCcEEEEecCCCCCce-EEeeC------C----CCCeeEEEeCCCCCCeEEEEeC-----------CCcE
Q 046451 232 QLVVASDEDSSPALRLWDMRNTMSPV-KEFVG------H----TKGVIAMSWCPNDSSYLLTCAK-----------DNRT 289 (719)
Q Consensus 232 ~l~~~s~d~~~~~I~lwDl~~~~~~~-~~~~~------h----~~~V~~v~~sp~d~~~l~sgs~-----------Dg~I 289 (719)
++..+.++ .|.++|+......+ ..+.. + ......++|++ +++.++++.. ++.|
T Consensus 214 -~~~~~~~~---~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~-dg~~lyv~~~~~~~~~~~~~~~~~v 288 (361)
T 2oiz_A 214 -AHFVSYYG---NVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR-ASGRMYVFMHPDGKEGTHKFPAAEI 288 (361)
T ss_dssp -EEEEBTTS---EEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET-TTTEEEEEEESSCCTTCTTCCCSEE
T ss_pred -EEEEeCCC---eEEEEEecCCCceecccccccCccccccccccCCeeEEEEec-CCCeEEEEEccCCCcccccCCCceE
Confidence 44445555 89999986542211 11111 0 01122378999 7666665543 3589
Q ss_pred EEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCC--cccc
Q 046451 290 ICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGC--SRYG 344 (719)
Q Consensus 290 ~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~--~~~~ 344 (719)
.+||+.+++.+.++..+. +.+++|++|| ++|++++. +.|.|||..++ +.+.
T Consensus 289 ~viD~~t~~~v~~i~~~~--p~~ia~spdg-~~l~v~n~-~~v~v~D~~t~~l~~~~ 341 (361)
T 2oiz_A 289 WVMDTKTKQRVARIPGRD--ALSMTIDQQR-NLMLTLDG-GNVNVYDISQPEPKLLR 341 (361)
T ss_dssp EEEETTTTEEEEEEECTT--CCEEEEETTT-TEEEEECS-SCEEEEECSSSSCEEEE
T ss_pred EEEECCCCcEEEEEecCC--eeEEEECCCC-CEEEEeCC-CeEEEEECCCCcceeeE
Confidence 999999999999998887 9999999999 57777776 99999999999 6654
No 174
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.67 E-value=2.3e-15 Score=158.73 Aligned_cols=198 Identities=14% Similarity=0.120 Sum_probs=142.6
Q ss_pred EEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc
Q 046451 128 GLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK 207 (719)
Q Consensus 128 ~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~ 207 (719)
+++++. ++.++++++.++.|++||+.+++....+ .. .....+..++|++++..+++++..++.|++||+.+++
T Consensus 4 g~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~---~~---~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 4 GPALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSC---VM---PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK 76 (349)
T ss_dssp CCCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEE---EC---SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred cccccC-CCEEEEEeCCCCeEEEEECCCCcEEEEE---ec---CCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc
Confidence 456666 7788999999999999999887654442 11 1112467899999986556666778999999999998
Q ss_pred eeEEecCCC-----CCceeEEEECCCCCcEEEEEeCC------------CCCCcEEEEecCCCC--CceEEeeCCCCCee
Q 046451 208 PVISFSESI-----KRRCSVLQWNPDVATQLVVASDE------------DSSPALRLWDMRNTM--SPVKEFVGHTKGVI 268 (719)
Q Consensus 208 ~~~~~~~~~-----~~~i~~l~~sp~g~~~l~~~s~d------------~~~~~I~lwDl~~~~--~~~~~~~~h~~~V~ 268 (719)
.+..+...+ ...+..++|+++|+. ++++..+ + .|.+||+.+.. ..+..+.. ...+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~~~~~~~---~i~~~d~~~~~~~~~~~~~~~-~~~~~ 151 (349)
T 1jmx_B 77 NTFHANLSSVPGEVGRSMYSFAISPDGKE-VYATVNPTQRLNDHYVVKPP---RLEVFSTADGLEAKPVRTFPM-PRQVY 151 (349)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTSSE-EEEEEEEEEECSSCEEECCC---EEEEEEGGGGGGBCCSEEEEC-CSSCC
T ss_pred EEEEEEcccccccccccccceEECCCCCE-EEEEcccccccccccccCCC---eEEEEECCCccccceeeeccC-CCccc
Confidence 877766222 334789999999964 5554433 4 89999997632 22334443 34688
Q ss_pred EEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC-----------------------------------------
Q 046451 269 AMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT----------------------------------------- 307 (719)
Q Consensus 269 ~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~----------------------------------------- 307 (719)
+++|++ +++ +++++ +.|++||+.+++.+..+..+.
T Consensus 152 ~~~~s~-dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 227 (349)
T 1jmx_B 152 LMRAAD-DGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPA 227 (349)
T ss_dssp CEEECT-TSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------C
T ss_pred ceeECC-CCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcc
Confidence 999999 777 55554 349999999998877665332
Q ss_pred ---------------------------CCeEEeEEcC-CCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 308 ---------------------------NWNFDIHWYP-KIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 308 ---------------------------~~v~~l~~sp-dg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
..+.+++|++ ++ .+|+++ ++.|.+||+.+++...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg-~~l~~~--~~~v~~~d~~~~~~~~ 289 (349)
T 1jmx_B 228 TADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP-NQIYGV--LNRLAKYDLKQRKLIK 289 (349)
T ss_dssp CCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT-TEEEEE--ESEEEEEETTTTEEEE
T ss_pred ccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCC-CEEEEE--cCeEEEEECccCeEEE
Confidence 1345677889 88 566666 8899999999987654
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.65 E-value=1.7e-15 Score=163.00 Aligned_cols=280 Identities=11% Similarity=0.040 Sum_probs=169.7
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEc-CC--CcEEEEcCCccccCCCCCCCCceeeeccccCC-EEEEEEeCCCCCEEE
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGL-VD--GSIDIWNPLSLISSGETGGNPLIAHLSRHKGP-VRGLEFNSFTPNLLA 140 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs-~d--g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~-V~~l~fsp~~~~~la 140 (719)
..+.+++|++|| ++|+... .+ ..|.+||+. .+ + ...+..+... ...+.|++ ++++|+
T Consensus 36 ~~~~~~~~SpdG--------~~l~~~~~~~g~~~l~~~d~~------~~---~-~~~l~~~~~~~~~~~~~sp-dg~~l~ 96 (396)
T 3c5m_A 36 NYFYQKCFTQDG--------KKLLFAGDFDGNRNYYLLNLE------TQ---Q-AVQLTEGKGDNTFGGFIST-DERAFF 96 (396)
T ss_dssp CCTTSCCBCTTS--------CEEEEEECTTSSCEEEEEETT------TT---E-EEECCCSSCBCTTTCEECT-TSSEEE
T ss_pred eeeecCcCCCCC--------CEEEEEEecCCCceEEEEECC------CC---c-EEEeecCCCCccccceECC-CCCEEE
Confidence 347889999998 5665553 33 367888873 22 2 2333333333 33478999 889999
Q ss_pred EEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEE-------------------EEecCCCCcEEEEE-----eCCC
Q 046451 141 SGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISF-------------------VSWNSKVQHILAST-----SYNG 196 (719)
Q Consensus 141 sgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~-------------------l~~sp~g~~~l~s~-----s~dg 196 (719)
.++.++.|++||+.+++....+ .. +...... +.|++++. .++.. ..+.
T Consensus 97 ~~~~~~~l~~~d~~~~~~~~~~---~~----~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~~~~~~~ 168 (396)
T 3c5m_A 97 YVKNELNLMKVDLETLEEQVIY---TV----DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS-WEKFAEFYHTNPTC 168 (396)
T ss_dssp EEETTTEEEEEETTTCCEEEEE---EC----CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS-HHHHHHHHHTCCCE
T ss_pred EEEcCCcEEEEECCCCCcEEEE---ec----ccccCCCCCEEEeccCCccccccccccccCCCCc-ceeeeeeccCCCcc
Confidence 9999999999999876543221 11 1111112 34566664 33322 4567
Q ss_pred cEEEEECCCCceeEEecCCCCCceeEEEECC-CCCcEEEEEeCCCCC---CcEEEEecCCCCCceEEeeCC--CCCeeEE
Q 046451 197 TTVVWDLKKQKPVISFSESIKRRCSVLQWNP-DVATQLVVASDEDSS---PALRLWDMRNTMSPVKEFVGH--TKGVIAM 270 (719)
Q Consensus 197 ~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp-~g~~~l~~~s~d~~~---~~I~lwDl~~~~~~~~~~~~h--~~~V~~v 270 (719)
.|++||+.+++...... +...+..+.|++ ++. .|+..+.+... ..|.+||+... . ...+..+ ...+..+
T Consensus 169 ~l~~~d~~~g~~~~~~~--~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~-~-~~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 169 RLIKVDIETGELEVIHQ--DTAWLGHPIYRPFDDS-TVGFCHEGPHDLVDARMWLVNEDGS-N-VRKIKEHAEGESCTHE 243 (396)
T ss_dssp EEEEEETTTCCEEEEEE--ESSCEEEEEEETTEEE-EEEEEECSCSSSCSCCCEEEETTSC-C-CEESSCCCTTEEEEEE
T ss_pred eEEEEECCCCcEEeecc--CCcccccceECCCCCC-EEEEEecCCCCCCCceEEEEECCCC-c-eeEeeccCCCccccce
Confidence 89999999887655543 667789999999 664 44444433211 36889998653 2 3333333 2357889
Q ss_pred EeCCCCCCeEEEEeCC-----CcEEEEECCCCeEEEEecCCCCCeEEeEEcC-CCCCEEEEEe----------------C
Q 046451 271 SWCPNDSSYLLTCAKD-----NRTICWDTVSGEIVSELPAGTNWNFDIHWYP-KIPGVISASS----------------F 328 (719)
Q Consensus 271 ~~sp~d~~~l~sgs~D-----g~I~iwd~~~~~~~~~l~~h~~~v~~l~~sp-dg~~~las~s----------------~ 328 (719)
+|+| |+++|+..+.+ +.|++||+.+++........ . .. +.|++ || .+|++++ .
T Consensus 244 ~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~-~~-~~~s~~dg-~~l~~~~~~~p~~~~~~~~~~~~~ 318 (396)
T 3c5m_A 244 FWIP-DGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP-P-CS-HLMSNFDG-SLMVGDGCDAPVDVADADSYNIEN 318 (396)
T ss_dssp EECT-TSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC-S-EE-EEEECSSS-SEEEEEECCC----------CCCC
T ss_pred EECC-CCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC-C-CC-CCccCCCC-ceEEEecCCcceeeccccccccCC
Confidence 9999 88877766544 44999999888654432221 2 33 89999 99 5776654 3
Q ss_pred CCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCC
Q 046451 329 DGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKS 382 (719)
Q Consensus 329 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~ 382 (719)
++.|++||+.+++................-. .......+|+.||+.++|....
T Consensus 319 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~s~~ 371 (396)
T 3c5m_A 319 DPFLYVLNTKAKSAQKLCKHSTSWDVLDGDR-QITHPHPSFTPNDDGVLFTSDF 371 (396)
T ss_dssp CCEEEEEETTTTBCCEEEECCCCCCCBTTBS-STTCCCCEECTTSSEEEEEECT
T ss_pred CCcEEEEecccCceEEccCCCCccccccccc-cCCCCCceEccCCCeEEEEecC
Confidence 4789999998876543222111000000000 0012345788889877776553
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.64 E-value=1.8e-14 Score=166.66 Aligned_cols=256 Identities=10% Similarity=-0.015 Sum_probs=168.7
Q ss_pred cCCCCCceeeeecCCCCCCCCCccceEEEE--cCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEE---------EE
Q 046451 61 SPSSERFNRLAWGKNGSGSEDFSLGLVAGG--LVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVR---------GL 129 (719)
Q Consensus 61 ~~~~~~V~~l~~sp~g~~~~~~~~~~lasg--s~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~---------~l 129 (719)
..|...+..++|+++. .+++.. +.++...||... .+ .....+..|...+. ..
T Consensus 20 ~~~~~~~~~~~~s~~~--------~~~~~~~~~~~~~~~l~~~~------~~---~~~~~l~~~~~~~~~~~~~~~~~~~ 82 (662)
T 3azo_A 20 ASRSGRPACVGAVGDE--------VWWVAPRPAEAGRATLVRRR------AD---GAEESALPAPWNVRNRVFEYSGFPW 82 (662)
T ss_dssp HHTCSCCEEEEEETTE--------EEEEEEETTTTTEEEEEEEC------TT---SCEEESSCTTCCBCCCGGGTCCCCE
T ss_pred hhcCCccceeEEcCCe--------EEEEecCcccCCcEEEEEEC------CC---CCcceeCCCCccccccccccCCccc
Confidence 3477889999999764 455555 557889999862 22 33555666665555 56
Q ss_pred EEe--CCCCCE-EEEEeC-CCcEEEEcCC--C-CCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC-------
Q 046451 130 EFN--SFTPNL-LASGAD-DGEICIWDLS--A-PAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN------- 195 (719)
Q Consensus 130 ~fs--p~~~~~-lasgs~-dg~I~iwdl~--~-~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d------- 195 (719)
.|+ | |+++ |+.++. +..|++|++. . +. ...+. ......+...+.+++|+++|+ .|++++.+
T Consensus 83 ~~~~SP-Dg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~--~~~~~~~~~~~~~~~~spDg~-~l~~~~~~~~~~~~~ 157 (662)
T 3azo_A 83 AGVPRP-AGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLT--PVSAVGGGLRWADPVLLPERG-EVWCMAEEFTGEGPS 157 (662)
T ss_dssp EEECCS-SSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECS--CCCCSTTCEEEEEEEEETTTT-EEEEEEEEECSSSTT
T ss_pred eeeeec-CCCeEEEEEECCCCeEEEEcCCCCCCCC-CEecc--CCccCCCCccccCcEECCCCC-EEEEEEecccCCCCC
Confidence 666 8 6666 665543 6678888776 2 32 22221 100011455788999999985 67766665
Q ss_pred ---CcEEEEECCC------CceeEEecCCCCCceeEEEECCCCCcEEEEEeCCC----CCCcEEEEecCCCC---CceEE
Q 046451 196 ---GTTVVWDLKK------QKPVISFSESIKRRCSVLQWNPDVATQLVVASDED----SSPALRLWDMRNTM---SPVKE 259 (719)
Q Consensus 196 ---g~I~iwd~~~------~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~----~~~~I~lwDl~~~~---~~~~~ 259 (719)
..|++||+.+ ++.. .+...+...+..++|+|||+.++++..... ....|++||+.... .....
T Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l 236 (662)
T 3azo_A 158 DVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL 236 (662)
T ss_dssp CEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE
T ss_pred CceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe
Confidence 5899999988 5543 332124467888999999965444443331 11379999997322 33333
Q ss_pred eeCCCCCeeEEEeCCCCCCeEEEEeCCC--cEEEEECCCCeEEEEecCCCCC--------eEEeEEcCCCCCEEEEEeCC
Q 046451 260 FVGHTKGVIAMSWCPNDSSYLLTCAKDN--RTICWDTVSGEIVSELPAGTNW--------NFDIHWYPKIPGVISASSFD 329 (719)
Q Consensus 260 ~~~h~~~V~~v~~sp~d~~~l~sgs~Dg--~I~iwd~~~~~~~~~l~~h~~~--------v~~l~~spdg~~~las~s~D 329 (719)
..+|...+..+.|+| |++++++++.++ .|.+||+.+++....+..+... +..++|++++ .++++++.
T Consensus 237 ~~~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~-~~~~~~~~- 313 (662)
T 3azo_A 237 LGGPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANG-LIAVVHGK- 313 (662)
T ss_dssp EEETTBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTS-CEEEEEBS-
T ss_pred CCCCCceEcceEECC-CCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCC-EEEEEEEc-
Confidence 445678899999999 788888888888 6777777677765544433322 4678899988 79999998
Q ss_pred CcEEEE--eCCCCcc
Q 046451 330 GKIGIY--NIEGCSR 342 (719)
Q Consensus 330 g~I~iw--d~~~~~~ 342 (719)
+.++|| |+.+++.
T Consensus 314 ~~~~l~~~d~~~~~~ 328 (662)
T 3azo_A 314 GAAVLGILDPESGEL 328 (662)
T ss_dssp SSCEEEEEETTTTEE
T ss_pred CccEEEEEECCCCcE
Confidence 999999 5555554
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.64 E-value=1.4e-14 Score=153.19 Aligned_cols=274 Identities=12% Similarity=0.082 Sum_probs=171.3
Q ss_pred cccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCcc
Q 046451 5 KGINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 5 ~~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
.....+..++| ||++||......... +......|.+|+++.+.. .. + ..+.+++|+|||
T Consensus 12 ~~~~~~~~~~~--dG~~i~~~~~~~~~~-~~~~~~~l~~~d~~~~~~---~~-l------~~~~~~~~SpDg-------- 70 (347)
T 2gop_A 12 AKFAYLSDPRT--KGELVAYVLTKANLK-DNKYENTIVIENLKNNAR---RF-I------ENATMPRISPDG-------- 70 (347)
T ss_dssp CCSCEEEEEEE--ETTEEEEEEEEEETT-TTEEEEEEEEEETTTCCE---EE-E------ESCEEEEECTTS--------
T ss_pred eeeEEcccceE--CCcEEEEEEeecCcc-cCCccceEEEEeCCCCce---EE-c------ccCCCeEECCCC--------
Confidence 44566788888 999988764322110 001244567777765432 11 1 467889999998
Q ss_pred ceEEEEcCC---Cc--EEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC--------------
Q 046451 85 GLVAGGLVD---GS--IDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD-------------- 145 (719)
Q Consensus 85 ~~lasgs~d---g~--I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d-------------- 145 (719)
+.|+..+.+ +. |.+|++. .+ +.. .+..+.. +..++|+| +++.|+.++.+
T Consensus 71 ~~la~~~~~~~~~~~~l~~~~~~------~g---~~~-~l~~~~~-~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~ 138 (347)
T 2gop_A 71 KKIAFMRANEEKKVSEIWVADLE------TL---SSK-KILEAKN-IRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVP 138 (347)
T ss_dssp SEEEEEEEETTTTEEEEEEEETT------TT---EEE-EEEEESE-EEEEEECT-TSSEEEEEEECCCC---------CC
T ss_pred CEEEEEEeccCCCcceEEEEECC------CC---ceE-EEEcCCC-ccceeECC-CCCEEEEEEccCCCcCCcEEEcccc
Confidence 577766543 33 7777763 22 322 3333334 99999999 77877777632
Q ss_pred -------------CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC-------cEEEEECCC
Q 046451 146 -------------GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG-------TTVVWDLKK 205 (719)
Q Consensus 146 -------------g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg-------~I~iwd~~~ 205 (719)
..|++||+.+++.... +.. . .+..+.|+++| +++++..++ ...||.+.+
T Consensus 139 ~~~~g~~~~~~~~~~l~~~d~~~~~~~~~---l~~-----~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~ 207 (347)
T 2gop_A 139 AWFDDLGFFDGEKTTFWIFDTESEEVIEE---FEK-----P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWED 207 (347)
T ss_dssp CC---------CEEEEEEEETTTTEEEEE---EEE-----E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEET
T ss_pred eeecCcccccCccceEEEEECCCCeEEee---ecC-----C-CcccccCCCCe--EEEEEecccccccccccccEEEeCC
Confidence 5799999987654222 211 1 57789999997 666665542 334444444
Q ss_pred CceeEEecCCCCCceeEEEECCCCCcEEEEEeCCC----CCCcEEEEecCCCCCceEEeeCCCCCeeE-EEeCCCCCCeE
Q 046451 206 QKPVISFSESIKRRCSVLQWNPDVATQLVVASDED----SSPALRLWDMRNTMSPVKEFVGHTKGVIA-MSWCPNDSSYL 280 (719)
Q Consensus 206 ~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~----~~~~I~lwDl~~~~~~~~~~~~h~~~V~~-v~~sp~d~~~l 280 (719)
++. ..+. .+ ..+.. ++|+|+.+++.+..+. ....|++|| + .+......+|...+.. +.|+ |+ ++
T Consensus 208 ~~~-~~l~-~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~~~~~~~~~~s--dg-~~ 276 (347)
T 2gop_A 208 GKE-EKMF-EK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD--G-KEVMGILDEVDRGVGQAKIKD--GK-VY 276 (347)
T ss_dssp TEE-EEEE-EE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEEESSTTCCSEEEEEEEET--TE-EE
T ss_pred Cce-EEec-cC-cceee--ECCCCCEEEEEEccccCCccccceEEEEC--C-CceEeccccCCcccCCccEEc--Cc-EE
Confidence 443 3333 23 44444 4899976555543321 123688888 3 2333334456677886 8998 55 88
Q ss_pred EEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcE-EEEeCC
Q 046451 281 LTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKI-GIYNIE 338 (719)
Q Consensus 281 ~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I-~iwd~~ 338 (719)
++++.++.++|| +.+++....+ .+...|.+++|++ . ++++++.++.. .||.++
T Consensus 277 ~~~~~~~~~~l~-~~~g~~~~~~-~~~~~v~~~~~s~-~--~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 277 FTLFEEGSVNLY-IWDGEIKPIA-KGRHWIMGFDVDE-I--VVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEETTEEEEE-EESSSEEEEE-CSSSEEEEEEESS-S--EEEEEECSSSCCEEEEES
T ss_pred EEEecCCcEEEE-EcCCceEEEe-cCCCeEEeeeeeC-c--EEEEEcCCCChHHheEeC
Confidence 999999999999 8766654443 4467799999999 4 77777666654 777776
No 178
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.63 E-value=6.1e-14 Score=149.77 Aligned_cols=280 Identities=11% Similarity=0.099 Sum_probs=179.2
Q ss_pred eEEEcCCCCeEEEeecc-ceeecccCCCceEEEEEeeccCCcccceeec-ccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 12 SVAFAPDAPYMAAGTMA-GAVDLSFSSSANLEIFKLDFQSEDRDLLLVG-ESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 12 ~vafSpdg~~Latgs~d-G~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~-~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
.++|||||++|++++.. +.+ .+-..++.|.+||....+....+.+.. ...+......++|+++| ++|++
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~-~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg--------~~l~v 124 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERI-TRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDG--------KFIVL 124 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTS-SSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTS--------SEEEE
T ss_pred ceEECCCCCEEEEEEeccccc-ccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCC--------CEEEE
Confidence 78999999999988631 000 000113456889877554444443211 11133567889999998 67777
Q ss_pred EcC--CCcEEEEcCCccccCCCCCCCCceee-eccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCC-ccCCc
Q 046451 90 GLV--DGSIDIWNPLSLISSGETGGNPLIAH-LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPS-HFPPL 165 (719)
Q Consensus 90 gs~--dg~I~lwd~~~~~~~~~~~~~~~~~~-l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~-~~~~l 165 (719)
++. ++.|.+||+ .++ +.+.. +. + .....+.+.+.+...+++.+.||.+.+|++....... ... .
T Consensus 125 ~n~~~~~~v~v~d~------~~~---~~~~~~i~-~-~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~-~ 192 (361)
T 2oiz_A 125 QNASPATSIGIVDV------AKG---DYVEDVTA-A-AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSR-S 192 (361)
T ss_dssp EEESSSEEEEEEET------TTT---EEEEEEGG-G-TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEE-C
T ss_pred ECCCCCCeEEEEEC------CCC---cEEEEEec-C-CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeecc-c
Confidence 653 689999999 344 45554 33 2 2223356677555788899999999999986532221 000 0
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCcee--EEecCCC---------CCceeEEEECCCCCcEEE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPV--ISFSESI---------KRRCSVLQWNPDVATQLV 234 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~--~~~~~~~---------~~~i~~l~~sp~g~~~l~ 234 (719)
.......... ..+.+.+++. .++..+.++.|+++|+...+.. ..+.... ......++|+++++++++
T Consensus 193 ~~~~~~~~~~-~~~~~~~~g~-~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv 270 (361)
T 2oiz_A 193 KQMFSVKDDP-IFIAPALDKD-KAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYV 270 (361)
T ss_dssp CCCSCTTTSC-BCSCCEECSS-EEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEE
T ss_pred cceEcCCCCc-eEEEecccCC-EEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEE
Confidence 0000001111 1223345553 5556678899999999765422 2221000 111223789999876666
Q ss_pred EEeCCC-------CCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC--eEEEEecC
Q 046451 235 VASDED-------SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG--EIVSELPA 305 (719)
Q Consensus 235 ~~s~d~-------~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~--~~~~~l~~ 305 (719)
+...++ ....|.+||+.+. +.+.++..+. +.+|+|+| |+++|++++. +.|.+||..++ +.+.++..
T Consensus 271 ~~~~~~~~~~~~~~~~~v~viD~~t~-~~v~~i~~~~--p~~ia~sp-dg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~ 345 (361)
T 2oiz_A 271 FMHPDGKEGTHKFPAAEIWVMDTKTK-QRVARIPGRD--ALSMTIDQ-QRNLMLTLDG-GNVNVYDISQPEPKLLRTIEG 345 (361)
T ss_dssp EEESSCCTTCTTCCCSEEEEEETTTT-EEEEEEECTT--CCEEEEET-TTTEEEEECS-SCEEEEECSSSSCEEEEEETT
T ss_pred EEccCCCcccccCCCceEEEEECCCC-cEEEEEecCC--eeEEEECC-CCCEEEEeCC-CeEEEEECCCCcceeeEEecc
Confidence 654111 1237999999875 6677787776 99999999 8889998887 99999999999 99999877
Q ss_pred CCCCeEEeEEcCCC
Q 046451 306 GTNWNFDIHWYPKI 319 (719)
Q Consensus 306 h~~~v~~l~~spdg 319 (719)
+......+.|+|+|
T Consensus 346 ~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 346 AAEASLQVQFHPVG 359 (361)
T ss_dssp SCSSEEEEEECCCS
T ss_pred CCCCcEEEEecCCC
Confidence 77778999999998
No 179
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.63 E-value=1.3e-12 Score=134.41 Aligned_cols=282 Identities=9% Similarity=-0.054 Sum_probs=185.2
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
.+.+.+++++++|+++++...++.| .+||.+ +. ... .........+.++++.+++ .+
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~~v----------~~~d~~-~~-~~~---~~~~~~~~~~~~i~~~~~g--------~l 70 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKANMI----------SCINLD-GK-ITE---YPLPTPDAKVMCLTISSDG--------EV 70 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEE----------EEECTT-CC-EEE---EECSSTTCCEEEEEECTTS--------CE
T ss_pred CCCccceEECCCCCEEEEecCCCcE----------EEEcCC-CC-eEE---ecCCcccCceeeEEECCCC--------CE
Confidence 3678999999999977766444544 555544 11 111 1111234678899999887 57
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCc-eeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPL-IAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~-~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+++...++.|..||.. + .. ...+......+.++++++ +++++++...++.|.+||. +++.. .+
T Consensus 71 ~v~~~~~~~i~~~~~~-------g---~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~-~~--- 134 (299)
T 2z2n_A 71 WFTENAANKIGRITKK-------G---IIKEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIR-EY--- 134 (299)
T ss_dssp EEEETTTTEEEEECTT-------S---CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEE-EE---
T ss_pred EEeCCCCCeEEEECCC-------C---cEEEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEE-Ee---
Confidence 7777668899999973 1 11 112222455789999998 6788877777889999998 43322 11
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
.. ......+..++++++| +++++...++.|.+||. +++............+..++++++|. ++++...++ .|
T Consensus 135 ~~--~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~---~i 206 (299)
T 2z2n_A 135 EL--PNKGSYPSFITLGSDN-ALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGN---KI 206 (299)
T ss_dssp EC--SSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTT---EE
T ss_pred cC--CCCCCCCceEEEcCCC-CEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCc---eE
Confidence 10 1123468999999987 57776667789999998 66554321213455688999999974 555554454 79
Q ss_pred EEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEE-ecCCCCCeEEeEEcCCCCCEEE
Q 046451 246 RLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSE-LPAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~-l~~h~~~v~~l~~spdg~~~la 324 (719)
.+||. ++......+..+...+.++++++ +++++++...++.|.+||. +++.... +..+...+.++.+ +++ .+++
T Consensus 207 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g-~l~v 281 (299)
T 2z2n_A 207 GRITT-SGEITEFKIPTPNARPHAITAGA-GIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGE-TIWF 281 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSS-CEEE
T ss_pred EEECC-CCcEEEEECCCCCCCceeEEECC-CCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCC-CEEE
Confidence 99998 43211112233456789999998 7776666657899999998 5553322 3445567999999 877 5666
Q ss_pred EEeCCCcEEEEeCCCCc
Q 046451 325 ASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 325 s~s~Dg~I~iwd~~~~~ 341 (719)
+.+ .+.|..++..+++
T Consensus 282 ~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 282 AME-CDKIGKLTLIKDN 297 (299)
T ss_dssp EET-TTEEEEEEEC---
T ss_pred Eec-CCcEEEEEcCccc
Confidence 655 6778788877654
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.62 E-value=2e-14 Score=167.53 Aligned_cols=292 Identities=8% Similarity=-0.060 Sum_probs=182.5
Q ss_pred EcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceee-c--ccCCCCCceeeeecCCCCCCCCCccceEE---
Q 046451 15 FAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLV-G--ESPSSERFNRLAWGKNGSGSEDFSLGLVA--- 88 (719)
Q Consensus 15 fSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~-~--~~~~~~~V~~l~~sp~g~~~~~~~~~~la--- 88 (719)
.++||++++....++. ...-.||..+......+..+- . ..+|...+.+++||||| ++|+
T Consensus 75 p~~dG~~~~~~~~~~~-------~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG--------~~la~~~ 139 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKD-------KEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDG--------KKVAFAQ 139 (695)
T ss_dssp CEEETTEEEEEEECTT-------CSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTS--------SEEEEEE
T ss_pred CEEECCEEEEEEEcCC-------CeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCC--------CEEEEEE
Confidence 3489999988765542 112245655532222221111 0 12345578899999998 5776
Q ss_pred --EEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCE--EEEEEeCCCCCEEEEEeCCCc-------------EEEE
Q 046451 89 --GGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPV--RGLEFNSFTPNLLASGADDGE-------------ICIW 151 (719)
Q Consensus 89 --sgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V--~~l~fsp~~~~~lasgs~dg~-------------I~iw 151 (719)
.|+.+..|++||+. ++ +.+. ..+...+ ..++|++ |++.|+.++.|.. |++|
T Consensus 140 ~~~G~~~~~i~v~dl~------tg---~~~~--~~~~~~~~~~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~ 207 (695)
T 2bkl_A 140 KPNAADEAVLHVIDVD------SG---EWSK--VDVIEGGKYATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYH 207 (695)
T ss_dssp EETTCSCCEEEEEETT------TC---CBCS--SCCBSCCTTCCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEE
T ss_pred CCCCCceEEEEEEECC------CC---CCcC--CcccCcccccceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEE
Confidence 34445689999994 33 2220 1111222 6899999 7888988888776 9999
Q ss_pred cCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC----cEEEEECCCCceeEEecCCCCCceeEEEECC
Q 046451 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG----TTVVWDLKKQKPVISFSESIKRRCSVLQWNP 227 (719)
Q Consensus 152 dl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg----~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp 227 (719)
++.++..... +......+...+..+.|+++|.. |+.++.++ .|++||..+++.. .+. .+...+....| +
T Consensus 208 ~l~t~~~~~~---lv~~~~~~~~~~~~~~~SpDG~~-l~~~~~~~~~~~~l~~~~~~~~~~~-~l~-~~~~~~~~~~~-~ 280 (695)
T 2bkl_A 208 TLGTEPSKDT---VVHERTGDPTTFLQSDLSRDGKY-LFVYILRGWSENDVYWKRPGEKDFR-LLV-KGVGAKYEVHA-W 280 (695)
T ss_dssp ETTSCGGGCE---EEECCCCCTTCEEEEEECTTSCC-EEEEEEETTTEEEEEEECTTCSSCE-EEE-ECSSCCEEEEE-E
T ss_pred ECCCCchhce---EEEecCCCCEEEEEEEECCCCCE-EEEEEeCCCCceEEEEEcCCCCceE-Eee-cCCCceEEEEe-c
Confidence 9987753211 11112234457889999999864 44444444 6777776555433 333 24445555666 6
Q ss_pred CCCcEEEEEeCCCCCCcEEEEecCCCCC-ceEEeeCC--CCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC-CCeEEEEe
Q 046451 228 DVATQLVVASDEDSSPALRLWDMRNTMS-PVKEFVGH--TKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV-SGEIVSEL 303 (719)
Q Consensus 228 ~g~~~l~~~s~d~~~~~I~lwDl~~~~~-~~~~~~~h--~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~-~~~~~~~l 303 (719)
+|. +++.+..+...+.|.+||+.+... ....+..+ ...+..++|+ ++.++++...|+..+||.+. +++.+..+
T Consensus 281 ~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 281 KDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp TTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred CCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence 765 666555343345899999976531 12344433 4457788887 56788899999988888554 46666666
Q ss_pred cCC-CCCeEEeEEcCCCCCEEEEEeC---CCcEEEEeCCCCccc
Q 046451 304 PAG-TNWNFDIHWYPKIPGVISASSF---DGKIGIYNIEGCSRY 343 (719)
Q Consensus 304 ~~h-~~~v~~l~~spdg~~~las~s~---Dg~I~iwd~~~~~~~ 343 (719)
..+ ...+..+++++++..++++.+. .++|++||+.+++..
T Consensus 358 ~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~ 401 (695)
T 2bkl_A 358 QLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSE 401 (695)
T ss_dssp CCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred cCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 655 5668889999998545544433 478999999887653
No 181
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.61 E-value=7.5e-14 Score=147.00 Aligned_cols=264 Identities=9% Similarity=0.028 Sum_probs=181.7
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeeccc--------------CCCceEEEEEeeccCCcccceeecccCCCCCceeee
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSF--------------SSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLA 71 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~--------------s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~ 71 (719)
..+.+.+|+|+++|+++++...++.+.++. ..++.|.+||.+.+.... .....+-.....|+
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~----~~~~~~~~~p~gia 97 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQ----SSGKNLFYLPHGLS 97 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEE----EECTTTCSSEEEEE
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEe----ccCCCccCCceEEE
Confidence 357799999999999998887775543311 122467888876443211 11123445788999
Q ss_pred ecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeee---------ccccCCEEEEEEeCCCCCEEEEE
Q 046451 72 WGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL---------SRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 72 ~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l---------~~h~~~V~~l~fsp~~~~~lasg 142 (719)
+++++ +++++...++.|++||.+.. . ..+..+ ..+.....+|+|++++++++++.
T Consensus 98 ~d~~g--------~l~v~d~~~~~v~~~~~~g~-----~---~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d 161 (329)
T 3fvz_A 98 IDTDG--------NYWVTDVALHQVFKLDPHSK-----E---GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSD 161 (329)
T ss_dssp ECTTS--------CEEEEETTTTEEEEECTTCS-----S---CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEE
T ss_pred ECCCC--------CEEEEECCCCEEEEEeCCCC-----e---EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEe
Confidence 99998 68888888999999997421 0 133333 34455789999998667788877
Q ss_pred e-CCCcEEEEcCCCCCCCCccCCccCCC----CCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-CC
Q 046451 143 A-DDGEICIWDLSAPAEPSHFPPLRGNG----SAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-SI 216 (719)
Q Consensus 143 s-~dg~I~iwdl~~~~~~~~~~~l~~~~----~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-~~ 216 (719)
+ .++.|++||. ++.....+.. .... ..+-.....|++++++.+++++...+++|++||..+++.+..+.. .+
T Consensus 162 ~~~~~~I~~~~~-~g~~~~~~~~-~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~ 239 (329)
T 3fvz_A 162 GYCNSRIVQFSP-SGKFVTQWGE-ESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASF 239 (329)
T ss_dssp CSSCCEEEEECT-TSCEEEEECE-ECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTT
T ss_pred CCCCCeEEEEcC-CCCEEEEecc-CCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecccc
Confidence 6 6899999994 3443333210 0000 112235889999998557888888899999999998888887752 35
Q ss_pred CCceeEEEECCCCCcEEEEEeCC----CCCCcEEEEecCCCCCceEEe---eCCCCCeeEEEeCCCCCCeEEEEeCCCcE
Q 046451 217 KRRCSVLQWNPDVATQLVVASDE----DSSPALRLWDMRNTMSPVKEF---VGHTKGVIAMSWCPNDSSYLLTCAKDNRT 289 (719)
Q Consensus 217 ~~~i~~l~~sp~g~~~l~~~s~d----~~~~~I~lwDl~~~~~~~~~~---~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I 289 (719)
...+..++|+| + .++...+.. .....|++||+.++ +.+..+ .++......|++++ ++.++++...+++|
T Consensus 240 ~~~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g-~~~~~~~~~~~~~~~p~~ia~~~-dG~lyvad~~~~~I 315 (329)
T 3fvz_A 240 GRNVFAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSG-EIIDVFKPVRKHFDMPHDIVASE-DGTVYIGDAHTNTV 315 (329)
T ss_dssp TTCEEEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTC-CEEEEECCSSSCCSSEEEEEECT-TSEEEEEESSSCCE
T ss_pred CCCcceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCC-eEEEEEcCCCCccCCeeEEEECC-CCCEEEEECCCCEE
Confidence 56788999999 3 233332211 11237999998775 556665 35677899999999 88888888899999
Q ss_pred EEEECC
Q 046451 290 ICWDTV 295 (719)
Q Consensus 290 ~iwd~~ 295 (719)
++|++.
T Consensus 316 ~~~~~~ 321 (329)
T 3fvz_A 316 WKFTLT 321 (329)
T ss_dssp EEEEEE
T ss_pred EEEeCC
Confidence 999974
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.61 E-value=2.2e-13 Score=153.36 Aligned_cols=296 Identities=14% Similarity=0.096 Sum_probs=198.3
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEee--ccCCcccceeecccCCCCCceeeeec----CCCCCCCC
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLD--FQSEDRDLLLVGESPSSERFNRLAWG----KNGSGSED 81 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~--~~~~~~~~~~~~~~~~~~~V~~l~~s----p~g~~~~~ 81 (719)
..+..++|||||++|.+++.+|.| .+||+. +... ............++|+ +||.
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V----------~viD~~~~t~~~------v~~i~~G~~P~~ia~s~~~~pDGk---- 256 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKV----------NMIDLWMKEPTT------VAEIKIGSEARSIETSKMEGWEDK---- 256 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEE----------EEEETTSSSCCE------EEEEECCSEEEEEEECCSTTCTTT----
T ss_pred CCccceEECCCCCEEEEEcCCCeE----------EEEECCCCCCcE------eEEEecCCCCceeEEccccCCCCC----
Confidence 456789999999999998776655 788874 2222 2222233456789999 5883
Q ss_pred CccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc----------ccC-CEEEEEEeCCCCCEEEEEeCCCcEEE
Q 046451 82 FSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR----------HKG-PVRGLEFNSFTPNLLASGADDGEICI 150 (719)
Q Consensus 82 ~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~----------h~~-~V~~l~fsp~~~~~lasgs~dg~I~i 150 (719)
.++++...++.|.|+|.. +. +.+..+.. |.. .+..+.+++.+..+++....+|.|.+
T Consensus 257 ---~l~v~n~~~~~v~ViD~~------t~---~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~ 324 (567)
T 1qks_A 257 ---YAIAGAYWPPQYVIMDGE------TL---EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 324 (567)
T ss_dssp ---EEEEEEEETTEEEEEETT------TC---CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred ---EEEEEEccCCeEEEEECC------CC---cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEE
Confidence 344445566999999973 33 44444331 222 67788888855566777777899999
Q ss_pred EcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-C---CCCceeEEEEC
Q 046451 151 WDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-S---IKRRCSVLQWN 226 (719)
Q Consensus 151 wdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-~---~~~~i~~l~~s 226 (719)
+|....+..... .+ .......++.|++++..+++++..+++|.++|+.+++.+..+.. + |.+.-..+ ++
T Consensus 325 vd~~~~~~~~v~-~i-----~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~ 397 (567)
T 1qks_A 325 VDYTDLNNLKTT-EI-----SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VH 397 (567)
T ss_dssp EETTCSSEEEEE-EE-----ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EE
T ss_pred EecCCCccceee-ee-----eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-EC
Confidence 998765422110 01 12235678899999876666666789999999999988776653 1 22111122 57
Q ss_pred CCCCcEEEEEeC-CCCCCcEEEEecCCC------CCceEEeeCCCCCeeEEEeCCCCCCeEEEEeC-------CCcEEEE
Q 046451 227 PDVATQLVVASD-EDSSPALRLWDMRNT------MSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAK-------DNRTICW 292 (719)
Q Consensus 227 p~g~~~l~~~s~-d~~~~~I~lwDl~~~------~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~-------Dg~I~iw 292 (719)
+++..+++++.. ++ .|.++|.... .+.+.++......-..|.++| ++++|++... .+.|.||
T Consensus 398 p~~g~v~~t~~~g~~---~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p-~~~~l~v~~~~~~~~~~~~~v~v~ 473 (567)
T 1qks_A 398 PTFGPVWATSHMGDD---SVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHP-NSQYLYVDATLNPEAEISGSVAVF 473 (567)
T ss_dssp TTTEEEEEEEBSSSS---EEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCT-TCSEEEEECTTCSSHHHHTCEEEE
T ss_pred CCCCcEEEeCCCCCC---eEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCC-CCCeEEEecCCCCCcccCceEEEE
Confidence 876556665543 34 8999998762 345677765544445578899 8888887663 4599999
Q ss_pred ECCCC-----eE-EEEec--------CCCCCeEEeEEcCCCCCEEEEEe----CCCcEEEEeCCCCcccccC
Q 046451 293 DTVSG-----EI-VSELP--------AGTNWNFDIHWYPKIPGVISASS----FDGKIGIYNIEGCSRYGVG 346 (719)
Q Consensus 293 d~~~~-----~~-~~~l~--------~h~~~v~~l~~spdg~~~las~s----~Dg~I~iwd~~~~~~~~~~ 346 (719)
|+.+. .. +..+. .....+..+.|+++|..++++.. .++.|.|+|..+.++....
T Consensus 474 d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i 545 (567)
T 1qks_A 474 DIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVI 545 (567)
T ss_dssp EGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEE
T ss_pred ECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEe
Confidence 99876 21 12222 12456899999999976666643 3799999999999887643
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.60 E-value=2.7e-13 Score=140.13 Aligned_cols=243 Identities=7% Similarity=-0.061 Sum_probs=168.4
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEe
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA 143 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs 143 (719)
.....+++|++++. .+++++..++.|.+||... . ...+..+...+.+++|++ +++++++..
T Consensus 27 ~~~~eg~~~d~~g~-------~l~~~~~~~~~i~~~~~~~----------~-~~~~~~~~~~~~~l~~~~-dg~l~v~~~ 87 (296)
T 3e5z_A 27 FTWTEGPVYVPARS-------AVIFSDVRQNRTWAWSDDG----------Q-LSPEMHPSHHQNGHCLNK-QGHLIACSH 87 (296)
T ss_dssp CSSEEEEEEEGGGT-------EEEEEEGGGTEEEEEETTS----------C-EEEEESSCSSEEEEEECT-TCCEEEEET
T ss_pred CccccCCeEeCCCC-------EEEEEeCCCCEEEEEECCC----------C-eEEEECCCCCcceeeECC-CCcEEEEec
Confidence 44567899999972 3888999999999999732 3 455566778899999999 788887777
Q ss_pred CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEE----e-------------CCCcEEEEECCCC
Q 046451 144 DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILAST----S-------------YNGTTVVWDLKKQ 206 (719)
Q Consensus 144 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~----s-------------~dg~I~iwd~~~~ 206 (719)
.++.|.+||..+++..... ..........+.+++++++| +++++. + ..+.|..+|.. +
T Consensus 88 ~~~~i~~~d~~~g~~~~~~---~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g 162 (296)
T 3e5z_A 88 GLRRLERQREPGGEWESIA---DSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G 162 (296)
T ss_dssp TTTEEEEECSTTCCEEEEE---CEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S
T ss_pred CCCeEEEEcCCCCcEEEEe---eccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCC-C
Confidence 7789999999776532221 11011112356789999997 477663 2 13456666655 4
Q ss_pred ceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCc---eEEeeCCCCCeeEEEeCCCCCCeEEEE
Q 046451 207 KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSP---VKEFVGHTKGVIAMSWCPNDSSYLLTC 283 (719)
Q Consensus 207 ~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~---~~~~~~h~~~V~~v~~sp~d~~~l~sg 283 (719)
+. ..+. ........++|+++++. +++...++ .|++||+...... ...+..+...+.++++++ +++++++.
T Consensus 163 ~~-~~~~-~~~~~~~gi~~s~dg~~-lv~~~~~~---~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~ 235 (296)
T 3e5z_A 163 TL-SAPI-RDRVKPNGLAFLPSGNL-LVSDTGDN---ATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA-GGLIWASA 235 (296)
T ss_dssp CE-EEEE-CCCSSEEEEEECTTSCE-EEEETTTT---EEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT-TSCEEEEE
T ss_pred CE-EEee-cCCCCCccEEECCCCCE-EEEeCCCC---eEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC-CCCEEEEc
Confidence 43 3333 35567789999999964 46666555 8999998632232 233333455677899999 78766655
Q ss_pred eCCCcEEEEECCCCeEEEEecCCCCCeEEeEE-cCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 284 AKDNRTICWDTVSGEIVSELPAGTNWNFDIHW-YPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 284 s~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~-spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
++.|.+||.. ++.+..+..+.. +.+++| .+++ ..|++++.+ .|..++..+.++.
T Consensus 236 --~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~-~~L~v~t~~-~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 236 --GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEG-RTLYMTVST-EFWSIETNVRGLE 290 (296)
T ss_dssp --TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTS-CEEEEEETT-EEEEEECSCCBCC
T ss_pred --CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCC-CEEEEEcCC-eEEEEEccccccc
Confidence 8899999985 888888887777 999999 5777 566666654 5666666666554
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.59 E-value=2.3e-13 Score=143.04 Aligned_cols=296 Identities=9% Similarity=0.019 Sum_probs=188.4
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
..|.+++|++++ ..++..+.++.+++|.- .....+..+...+.+++|++ ++++++++..
T Consensus 6 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~-~g~l~~~~~~ 64 (333)
T 2dg1_A 6 QDLPTLFYSGKS--------NSAVPIISESELQTITA------------EPWLEISKKGLQLEGLNFDR-QGQLFLLDVF 64 (333)
T ss_dssp CCCCBCCSCGGG--------GCSSCCCCGGGSCEEEC------------EEEEEEESSCCCEEEEEECT-TSCEEEEETT
T ss_pred cccceeeecCCc--------cceeEEeecccCccccc------------ceeEEEeccCccccCcEECC-CCCEEEEECC
Confidence 457788898886 45555577888888843 45556666777889999998 7788888888
Q ss_pred CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC----CcEEEEECCCCceeEEec-CCCCCc
Q 046451 145 DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN----GTTVVWDLKKQKPVISFS-ESIKRR 219 (719)
Q Consensus 145 dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d----g~I~iwd~~~~~~~~~~~-~~~~~~ 219 (719)
++.|++||..+++..... . .+...+.+++|+++| +++++...+ +.|.+||.++++....+. ......
T Consensus 65 ~~~i~~~d~~~~~~~~~~---~----~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 136 (333)
T 2dg1_A 65 EGNIFKINPETKEIKRPF---V----SHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYC 136 (333)
T ss_dssp TCEEEEECTTTCCEEEEE---E----CSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCC
T ss_pred CCEEEEEeCCCCcEEEEe---e----CCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCc
Confidence 999999999876533211 0 134579999999997 477766665 689999998876543332 124467
Q ss_pred eeEEEECCCCCcEEEEEeCC---CCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeE-EEEeCCCcEEEEECC
Q 046451 220 CSVLQWNPDVATQLVVASDE---DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYL-LTCAKDNRTICWDTV 295 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d---~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l-~sgs~Dg~I~iwd~~ 295 (719)
+..++++++|. ++++...+ ...+.|..||..+. .+..+..+...+..++|++ ++++| ++.+.++.|.+||+.
T Consensus 137 ~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~~-dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 137 IDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFR--TVTPIIQNISVANGIALST-DEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp EEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSC--CEEEEEEEESSEEEEEECT-TSSEEEEEEGGGTEEEEEEEC
T ss_pred ccceEECCCCC-EEEEeccccccCCCceEEEEeCCCC--EEEEeecCCCcccceEECC-CCCEEEEEeCCCCeEEEEEec
Confidence 89999999984 55554431 00124666665432 2333333345678999999 77755 455568899999986
Q ss_pred C-CeEEE--------EecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCc
Q 046451 296 S-GEIVS--------ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAG 366 (719)
Q Consensus 296 ~-~~~~~--------~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~ 366 (719)
+ ++.+. .+.++ ..+..++++++| .++++...++.|.+||.++. .+........ ...-+..+..
T Consensus 213 ~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G-~l~v~~~~~~~v~~~d~~g~-~~~~~~~~~~-----~~g~~~~~~~ 284 (333)
T 2dg1_A 213 DDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDD-NLYVAMYGQGRVLVFNKRGY-PIGQILIPGR-----DEGHMLRSTH 284 (333)
T ss_dssp TTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTC-CEEEEEETTTEEEEECTTSC-EEEEEECTTG-----GGTCSCBCCE
T ss_pred CCCcCcccccceEEEecCCC-CCCCceEECCCC-CEEEEEcCCCEEEEECCCCC-EEEEEEcCCC-----ccccccCcce
Confidence 3 33221 12222 458889999999 68888777899999998543 3221110000 0000112456
Q ss_pred eeeeeCCcEEEEccCCCCCccccccccccceeeccCCCCC
Q 046451 367 ASFGFGGKLVSFHPKSSAGHTSENSQHAPVHGVDQSKYGM 406 (719)
Q Consensus 367 ~s~s~~Gklv~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~ 406 (719)
++|+.||+.+.+....+. ....+.|..++..-.|.
T Consensus 285 ~~~~~dg~~L~v~~~~g~-----~~~~~~l~~~~~~~~g~ 319 (333)
T 2dg1_A 285 PQFIPGTNQLIICSNDIE-----MGGGSMLYTVNGFAKGH 319 (333)
T ss_dssp EEECTTSCEEEEEEECGG-----GTCCEEEEEEECSSCBC
T ss_pred EEECCCCCEEEEEeCccC-----CCCCceEEEEecccCce
Confidence 888888866655544332 12344455555443333
No 185
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.59 E-value=3.3e-13 Score=138.61 Aligned_cols=247 Identities=15% Similarity=0.139 Sum_probs=164.2
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceee-cccCCCCCceeeee-cCCCCCCCCCc
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLV-GESPSSERFNRLAW-GKNGSGSEDFS 83 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~-~~~~~~~~V~~l~~-sp~g~~~~~~~ 83 (719)
+.....+++++++|+++++...++.| .+||.+. .....+... ....+...+.++++ .+++
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i----------~~~d~~g-~~~~~~~~~~~~~~~~~~p~~i~~~~~~g------- 89 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRI----------QIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSG------- 89 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEE----------EEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTT-------
T ss_pred ccCCCceEEECCCCCEEEEECCCCEE----------EEECCCC-cEEEEecccCCCcccccCceEEEEEcCCC-------
Confidence 34678899999999988887777766 4554431 111111000 00123356789999 4665
Q ss_pred cceEEEEcC-CCcEEEEcCCccccCCCCCCCCceeeec-cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCc
Q 046451 84 LGLVAGGLV-DGSIDIWNPLSLISSGETGGNPLIAHLS-RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSH 161 (719)
Q Consensus 84 ~~~lasgs~-dg~I~lwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~ 161 (719)
.++++... ++.|++||.. + ..+..+. .+...+.++++++ +++++++...++.|++||... +....
T Consensus 90 -~l~v~~~~~~~~i~~~d~~-------g---~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g-~~~~~ 156 (286)
T 1q7f_A 90 -DIIVTERSPTHQIQIYNQY-------G---QFVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQNG-NVLHK 156 (286)
T ss_dssp -EEEEEECGGGCEEEEECTT-------S---CEEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTTS-CEEEE
T ss_pred -eEEEEcCCCCCEEEEECCC-------C---cEEEEecCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCCC-CEEEE
Confidence 55665543 8899999952 2 3444443 3446789999999 778888878889999999653 32222
Q ss_pred cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-CCCCceeEEEECCCCCcEEEEEeCCC
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-SIKRRCSVLQWNPDVATQLVVASDED 240 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-~~~~~i~~l~~sp~g~~~l~~~s~d~ 240 (719)
+ .. ..+...+..++++++| +++++...++.|++||.. ++.+..+.. .+...+..|+++++| .++++...++
T Consensus 157 ~---~~--~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~ 228 (286)
T 1q7f_A 157 F---GC--SKHLEFPNGVVVNDKQ-EIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNG-EILIADNHNN 228 (286)
T ss_dssp E---EC--TTTCSSEEEEEECSSS-EEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTC-CEEEEECSSS
T ss_pred e---CC--CCccCCcEEEEECCCC-CEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCC-CEEEEeCCCC
Confidence 1 11 1233468999999997 577777778999999975 555666642 123578899999998 4666665542
Q ss_pred CCCcEEEEecCCCCCceEEeeCCCC--CeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC
Q 046451 241 SSPALRLWDMRNTMSPVKEFVGHTK--GVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297 (719)
Q Consensus 241 ~~~~I~lwDl~~~~~~~~~~~~h~~--~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~ 297 (719)
+.|++||.. .+.+..+..+.. .+.+++|++ +++++++ +.|++|++|++...
T Consensus 229 --~~i~~~~~~--g~~~~~~~~~~~~~~~~~i~~~~-~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 229 --FNLTIFTQD--GQLISALESKVKHAQCFDVALMD-DGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp --CEEEEECTT--SCEEEEEEESSCCSCEEEEEEET-TTEEEEE-ETTTEEEEEECSCC
T ss_pred --EEEEEECCC--CCEEEEEcccCCCCcceeEEECC-CCcEEEE-CCCCeEEEEEcccc
Confidence 169999964 245556654433 477999999 8877666 67999999998653
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.59 E-value=4.5e-13 Score=136.09 Aligned_cols=243 Identities=8% Similarity=-0.052 Sum_probs=168.1
Q ss_pred CceeeeecCCCCCCCCCccceEE-EEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC
Q 046451 66 RFNRLAWGKNGSGSEDFSLGLVA-GGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 66 ~V~~l~~sp~g~~~~~~~~~~la-sgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
...++++++++ ++++ +...++.|.+||... . ........+...+.++++++ +++++++..
T Consensus 25 ~p~~i~~~~~g--------~l~v~~~~~~~~i~~~~~~~------~---~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~- 85 (270)
T 1rwi_B 25 SPSGVAVDSAG--------NVYVTSEGMYGRVVKLATGS------T---GTTVLPFNGLYQPQGLAVDG-AGTVYVTDF- 85 (270)
T ss_dssp CEEEEEECTTC--------CEEEEECSSSCEEEEECC--------------EECCCCSCCSCCCEEECT-TCCEEEEET-
T ss_pred CccceEECCCC--------CEEEEccCCCCcEEEecCCC------c---ccceEeeCCcCCcceeEECC-CCCEEEEcC-
Confidence 67789999987 5666 547789999999732 1 11111122335678999998 677666555
Q ss_pred CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEE
Q 046451 145 DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQ 224 (719)
Q Consensus 145 dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~ 224 (719)
++.|.+||....... .+ . ......+..++++++| +++++...++.|.+||..+........ .....+.+++
T Consensus 86 ~~~i~~~d~~~~~~~-~~---~---~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~-~~~~~p~~i~ 156 (270)
T 1rwi_B 86 NNRVVTLAAGSNNQT-VL---P---FDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQTVLPF-TGLNDPDGVA 156 (270)
T ss_dssp TTEEEEECTTCSCCE-EC---C---CCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSCEECCC-CSCCSCCCEE
T ss_pred CCEEEEEeCCCceEe-ee---e---cCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCceeEeecc-ccCCCceeEE
Confidence 889999998764322 11 1 1122468999999987 577777778899999876554433222 2334678999
Q ss_pred ECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec
Q 046451 225 WNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP 304 (719)
Q Consensus 225 ~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~ 304 (719)
++++|. ++++...++ .|.+||.... ........+...+.+|++++ ++.++++...++.|.+||...........
T Consensus 157 ~~~~g~-l~v~~~~~~---~i~~~~~~~~-~~~~~~~~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~ 230 (270)
T 1rwi_B 157 VDNSGN-VYVTDTDNN---RVVKLEAESN-NQVVLPFTDITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTSTVLPF 230 (270)
T ss_dssp ECTTCC-EEEEEGGGT---EEEEECTTTC-CEEECCCSSCCSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCCEECCC
T ss_pred EeCCCC-EEEEECCCC---EEEEEecCCC-ceEeecccCCCCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcceeecc
Confidence 999984 666665555 7999998654 22222223336788999999 77777777778899999997654443333
Q ss_pred CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 305 AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 305 ~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
.+...+.+++++++| .++++...+++|++|++...+..
T Consensus 231 ~~~~~p~~i~~~~~g-~l~v~~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 231 TGLNTPLAVAVDSDR-TVYVADRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp CSCSCEEEEEECTTC-CEEEEEGGGTEEEEECCCGGGSC
T ss_pred CCCCCceeEEECCCC-CEEEEECCCCEEEEEcCCCcccc
Confidence 344568999999999 78899999999999999876653
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.59 E-value=2.1e-13 Score=143.62 Aligned_cols=276 Identities=11% Similarity=-0.013 Sum_probs=183.1
Q ss_pred CCceEEEEEeeccCCcccceee-cccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCc
Q 046451 37 SSANLEIFKLDFQSEDRDLLLV-GESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPL 115 (719)
Q Consensus 37 ~~~~i~iwd~~~~~~~~~~~~~-~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~ 115 (719)
.++.|.+||.++++....+... ..........++.+..+ +++++...++.|.+||. .++ +.
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~---------~lyv~~~~~~~v~viD~------~t~---~~ 76 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDG---------IGWIVVNNSHVIFAIDI------NTF---KE 76 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETT---------EEEEEEGGGTEEEEEET------TTC---CE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECC---------EEEEEEcCCCEEEEEEC------ccc---EE
Confidence 3677899998865543322110 11112244567777533 57777777899999998 455 66
Q ss_pred eeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe-C
Q 046451 116 IAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS-Y 194 (719)
Q Consensus 116 ~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s-~ 194 (719)
+.++. .......++|++ +++++++...++.|.+||+.+.+....+.. ............+++ ++.+++++.. .
T Consensus 77 ~~~i~-~~~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~--g~~~~~~~~p~~i~~--~~~~lyv~~~~~ 150 (328)
T 3dsm_A 77 VGRIT-GFTSPRYIHFLS-DEKAYVTQIWDYRIFIINPKTYEITGYIEC--PDMDMESGSTEQMVQ--YGKYVYVNCWSY 150 (328)
T ss_dssp EEEEE-CCSSEEEEEEEE-TTEEEEEEBSCSEEEEEETTTTEEEEEEEC--TTCCTTTCBCCCEEE--ETTEEEEEECTT
T ss_pred EEEcC-CCCCCcEEEEeC-CCeEEEEECCCCeEEEEECCCCeEEEEEEc--CCccccCCCcceEEE--ECCEEEEEcCCC
Confidence 66664 346788999988 565555544889999999998765443311 111111124456677 3334555544 4
Q ss_pred CCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCC-------CCcEEEEecCCCCCceEEeeCC-CCC
Q 046451 195 NGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS-------SPALRLWDMRNTMSPVKEFVGH-TKG 266 (719)
Q Consensus 195 dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~-------~~~I~lwDl~~~~~~~~~~~~h-~~~ 266 (719)
++.|.+||+.+++.+.++. .......+.++++|+ +++++..+.. .+.|.+||..+. +....+... ...
T Consensus 151 ~~~v~viD~~t~~~~~~i~--~g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~-~v~~~~~~~~g~~ 226 (328)
T 3dsm_A 151 QNRILKIDTETDKVVDELT--IGIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETF-TVEKQFKFKLGDW 226 (328)
T ss_dssp CCEEEEEETTTTEEEEEEE--CSSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTT-EEEEEEECCTTCC
T ss_pred CCEEEEEECCCCeEEEEEE--cCCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCC-eEEEEEecCCCCC
Confidence 8899999999999888877 344567899999984 5555544300 137999998764 444444432 236
Q ss_pred eeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEE--ecCCCCCeEEeEEcCCCCCEEEEE----eCCCcEEEEeCCCC
Q 046451 267 VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSE--LPAGTNWNFDIHWYPKIPGVISAS----SFDGKIGIYNIEGC 340 (719)
Q Consensus 267 V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~--l~~h~~~v~~l~~spdg~~~las~----s~Dg~I~iwd~~~~ 340 (719)
...++|++ ++++|+++.. .|.+||..+++.... +..+......++++|++..++++. ..++.|.+||.+ +
T Consensus 227 p~~la~~~-d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g 302 (328)
T 3dsm_A 227 PSEVQLNG-TRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-G 302 (328)
T ss_dssp CEEEEECT-TSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-C
T ss_pred ceeEEEec-CCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-C
Confidence 88999999 7888877654 899999988875321 222245689999999665788887 678999999998 6
Q ss_pred cccc
Q 046451 341 SRYG 344 (719)
Q Consensus 341 ~~~~ 344 (719)
+.+.
T Consensus 303 ~~~~ 306 (328)
T 3dsm_A 303 KLID 306 (328)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 5544
No 188
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.57 E-value=6.1e-13 Score=149.78 Aligned_cols=276 Identities=11% Similarity=0.037 Sum_probs=182.8
Q ss_pred CCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCce
Q 046451 37 SSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLI 116 (719)
Q Consensus 37 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~ 116 (719)
.++.|.++|.++++.... +.....+..+.|++|+ ++|++++.|+.|.+||+.. .+. +.+
T Consensus 175 ~~~~V~viD~~t~~v~~~------i~~g~~p~~v~~SpDG--------r~lyv~~~dg~V~viD~~~----~t~---~~v 233 (567)
T 1qks_A 175 DAGQIALIDGSTYEIKTV------LDTGYAVHISRLSASG--------RYLFVIGRDGKVNMIDLWM----KEP---TTV 233 (567)
T ss_dssp TTTEEEEEETTTCCEEEE------EECSSCEEEEEECTTS--------CEEEEEETTSEEEEEETTS----SSC---CEE
T ss_pred CCCeEEEEECCCCeEEEE------EeCCCCccceEECCCC--------CEEEEEcCCCeEEEEECCC----CCC---cEe
Confidence 345568888876543332 2334466799999998 7888888999999999831 133 455
Q ss_pred eeeccccCCEEEEEEe----CCCCCEEEEE-eCCCcEEEEcCCCCCCCCccCCccCCCC---CC-CCCeEEEEecCCCCc
Q 046451 117 AHLSRHKGPVRGLEFN----SFTPNLLASG-ADDGEICIWDLSAPAEPSHFPPLRGNGS---AA-QGEISFVSWNSKVQH 187 (719)
Q Consensus 117 ~~l~~h~~~V~~l~fs----p~~~~~lasg-s~dg~I~iwdl~~~~~~~~~~~l~~~~~---~h-~~~I~~l~~sp~g~~ 187 (719)
..+... .....++|+ + ++++++++ ..++.|.|+|..+.+.+..+........ .| ...+..+..++++..
T Consensus 234 ~~i~~G-~~P~~ia~s~~~~p-DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~ 311 (567)
T 1qks_A 234 AEIKIG-SEARSIETSKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPE 311 (567)
T ss_dssp EEEECC-SEEEEEEECCSTTC-TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSE
T ss_pred EEEecC-CCCceeEEccccCC-CCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCE
Confidence 555543 345789999 6 66666555 4569999999988776655421111000 01 226788888888776
Q ss_pred EEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC-----
Q 046451 188 ILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG----- 262 (719)
Q Consensus 188 ~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~----- 262 (719)
+++....+|.|.++|....+...............+.|+++|+++++++..++ .|.++|+.+. +.+..+..
T Consensus 312 ~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn---~V~ViD~~t~-kl~~~i~vgg~~P 387 (567)
T 1qks_A 312 FIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARN---KLVVIDTKEG-KLVAIEDTGGQTP 387 (567)
T ss_dssp EEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGT---EEEEEETTTT-EEEEEEECSSSSB
T ss_pred EEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCC---eEEEEECCCC-cEEEEEeccCcCC
Confidence 77777788999999998764332222124556778999999976666665555 8999999875 44444432
Q ss_pred CCCCeeEEEeCCCCCCeEEEEe-CCCcEEEEECCC-------CeEEEEecCCCCCeEEeEEcCCCCCEEEEEeC------
Q 046451 263 HTKGVIAMSWCPNDSSYLLTCA-KDNRTICWDTVS-------GEIVSELPAGTNWNFDIHWYPKIPGVISASSF------ 328 (719)
Q Consensus 263 h~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~~-------~~~~~~l~~h~~~v~~l~~spdg~~~las~s~------ 328 (719)
|.+.-..+ ++|+.+.+++++. .++.|.++|..+ .+.+.++......-..+.++|+++++.+....
T Consensus 388 hpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~ 466 (567)
T 1qks_A 388 HPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEI 466 (567)
T ss_dssp CCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHH
T ss_pred CCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCccc
Confidence 32222222 5672345555554 468999999987 67888887654444567899999544443311
Q ss_pred CCcEEEEeCCCC
Q 046451 329 DGKIGIYNIEGC 340 (719)
Q Consensus 329 Dg~I~iwd~~~~ 340 (719)
.++|.|+|+.+.
T Consensus 467 ~~~v~v~d~~~~ 478 (567)
T 1qks_A 467 SGSVAVFDIKAM 478 (567)
T ss_dssp HTCEEEEEGGGC
T ss_pred CceEEEEECCcc
Confidence 359999999876
No 189
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.56 E-value=4.1e-13 Score=157.48 Aligned_cols=294 Identities=11% Similarity=0.026 Sum_probs=178.5
Q ss_pred cCCCCeEEEeeccceeecccCCCceEEEEEeecc---CCccccee-ec--ccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 16 APDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQ---SEDRDLLL-VG--ESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 16 Spdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~---~~~~~~~~-~~--~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
+|||++++....++. .....||..+.. .......+ .. ..++...+..++||||| ++|+.
T Consensus 115 ~pdG~~~~~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG--------~~la~ 179 (741)
T 1yr2_A 115 QRRGASVFYSWNSGL-------MNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDG--------RLLAY 179 (741)
T ss_dssp EEETTEEEEEEECSS-------CSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTS--------SEEEE
T ss_pred EEECCEEEEEEEcCC-------CeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCC--------CEEEE
Confidence 499999988765542 112356666542 11111111 00 11233468899999998 56666
Q ss_pred EcCC-C----cEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCc--------------EEE
Q 046451 90 GLVD-G----SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGE--------------ICI 150 (719)
Q Consensus 90 gs~d-g----~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~--------------I~i 150 (719)
++.+ | .|++||+. ++ +.+.. ..+...+..++|++ | +.|+.++.|+. |++
T Consensus 180 ~~~~~G~e~~~i~v~dl~------tg---~~~~~-~~~~~~~~~~~wsp-D-~~l~~~~~~~~~~~~~~~~~~~~~~v~~ 247 (741)
T 1yr2_A 180 SVQDGGSDWRTVKFVGVA------DG---KPLAD-ELKWVKFSGLAWLG-N-DALLYSRFAEPKEGQAFQALNYNQTVWL 247 (741)
T ss_dssp EEEETTCSEEEEEEEETT------TC---CEEEE-EEEEEESCCCEEST-T-SEEEEEECCCC--------CCCCCEEEE
T ss_pred EEcCCCCceEEEEEEECC------CC---CCCCc-cCCCceeccEEEEC-C-CEEEEEEecCcccccccccCCCCCEEEE
Confidence 5443 3 59999983 34 33222 11222235789999 6 77777776554 899
Q ss_pred EcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC-----CcEEEEECCCC--ceeEEecCCCCCceeEE
Q 046451 151 WDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN-----GTTVVWDLKKQ--KPVISFSESIKRRCSVL 223 (719)
Q Consensus 151 wdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d-----g~I~iwd~~~~--~~~~~~~~~~~~~i~~l 223 (719)
|++.+...... +......+...+..+.|+++|. +|+..+.+ ..|++||+.++ ++...+. .+...+...
T Consensus 248 ~~lgt~~~~~~---lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~~~ 322 (741)
T 1yr2_A 248 HRLGTPQSADQ---PVFATPELPKRGHGASVSSDGR-WVVITSSEGTDPVNTVHVARVTNGKIGPVTALI-PDLKAQWDF 322 (741)
T ss_dssp EETTSCGGGCE---EEECCTTCTTCEEEEEECTTSC-EEEEEEECTTCSCCEEEEEEEETTEECCCEEEE-CSSSSCEEE
T ss_pred EECCCCchhCE---EEeccCCCCeEEEEEEECCCCC-EEEEEEEccCCCcceEEEEECCCCCCcccEEec-CCCCceEEE
Confidence 99977653211 1111122333588999999985 55554433 48999999877 3144444 233344444
Q ss_pred EECCCCCcEEEEEeCCCCCCcEEEEecCCCC-CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC-CCeEEE
Q 046451 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTM-SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV-SGEIVS 301 (719)
Q Consensus 224 ~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~-~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~-~~~~~~ 301 (719)
. +++|+.+++.+..+.....|.+||+.+.. .....+..+...+..++|+ ++.++++...|+..+||.+. +++.+.
T Consensus 323 ~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~ 399 (741)
T 1yr2_A 323 V-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAG 399 (741)
T ss_dssp E-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEE
T ss_pred E-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCcee
Confidence 3 47886555555443334579999987641 2233334444556677876 56788888899987777543 466666
Q ss_pred EecC-CCCCeEEeEEcCCCCCEEEEEeC---CCcEEEEeCCCCcccc
Q 046451 302 ELPA-GTNWNFDIHWYPKIPGVISASSF---DGKIGIYNIEGCSRYG 344 (719)
Q Consensus 302 ~l~~-h~~~v~~l~~spdg~~~las~s~---Dg~I~iwd~~~~~~~~ 344 (719)
.+.. +...+..+.|++++..++++.+. .++|++||+.+++...
T Consensus 400 ~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~ 446 (741)
T 1yr2_A 400 AVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTP 446 (741)
T ss_dssp ECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEE
T ss_pred eccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEE
Confidence 6664 35668899999998656655443 4789999999877533
No 190
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.53 E-value=1.6e-12 Score=135.01 Aligned_cols=245 Identities=9% Similarity=0.047 Sum_probs=164.5
Q ss_pred CCceeeeecCCCCCCCCCccceEEE-------EcCCCcEEEEcCCccccCCCCCCCCceeeec-----cccCCEEEEEEe
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAG-------GLVDGSIDIWNPLSLISSGETGGNPLIAHLS-----RHKGPVRGLEFN 132 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~las-------gs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~-----~h~~~V~~l~fs 132 (719)
....+++|++++ .++++ +..++.|.+||.. ++ +. ..+. ++...+.+++++
T Consensus 18 ~~~~~~~~~~~g--------~l~~~~~~~~~~~~~~~~i~~~d~~------~g---~~-~~~~~~~~~~~~~~~~~i~~~ 79 (314)
T 1pjx_A 18 PGAEGPVFDKNG--------DFYIVAPEVEVNGKPAGEILRIDLK------TG---KK-TVICKPEVNGYGGIPAGCQCD 79 (314)
T ss_dssp TTCEEEEECTTS--------CEEEEETTCEETTEECCEEEEECTT------TC---CE-EEEECCEETTEECCEEEEEEC
T ss_pred CCccCceECCCC--------CEEEEEeccccCCCCCCEEEEEeCC------CC---cE-EEEEecccCCCCCCCceEEEe
Confidence 356789999876 56666 5678899999973 33 22 2222 255778999999
Q ss_pred CCC-CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC---------------C
Q 046451 133 SFT-PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN---------------G 196 (719)
Q Consensus 133 p~~-~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d---------------g 196 (719)
+ + +++++ ++.++.|.+||.. ++......... .......+.+++++++| +++++...+ +
T Consensus 80 ~-~~g~l~v-~~~~~~l~~~d~~-g~~~~~~~~~~--~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~ 153 (314)
T 1pjx_A 80 R-DANQLFV-ADMRLGLLVVQTD-GTFEEIAKKDS--EGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFG 153 (314)
T ss_dssp S-SSSEEEE-EETTTEEEEEETT-SCEEECCSBCT--TSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCE
T ss_pred c-CCCcEEE-EECCCCEEEEeCC-CCEEEEEeccC--CCccccCCcCEEECCCC-CEEEEecCcccccccccccccCCCC
Confidence 8 5 55454 4444579999987 44321101000 01112358899999997 466665554 5
Q ss_pred cEEEEECCCCceeEEecCCCCCceeEEEEC----CCCCcEEEEEeCCCCCCcEEEEecCCCCC-----ceEEeeCCC-CC
Q 046451 197 TTVVWDLKKQKPVISFSESIKRRCSVLQWN----PDVATQLVVASDEDSSPALRLWDMRNTMS-----PVKEFVGHT-KG 266 (719)
Q Consensus 197 ~I~iwd~~~~~~~~~~~~~~~~~i~~l~~s----p~g~~~l~~~s~d~~~~~I~lwDl~~~~~-----~~~~~~~h~-~~ 266 (719)
.|..||.. ++...... .......++|+ ++++.++++...++ .|.+||++.... ....+..+. ..
T Consensus 154 ~l~~~~~~-g~~~~~~~--~~~~~~~i~~~~~~d~dg~~l~v~~~~~~---~i~~~~~~~~g~~~~~~~~~~~~~~~~~~ 227 (314)
T 1pjx_A 154 SIYCFTTD-GQMIQVDT--AFQFPNGIAVRHMNDGRPYQLIVAETPTK---KLWSYDIKGPAKIENKKVWGHIPGTHEGG 227 (314)
T ss_dssp EEEEECTT-SCEEEEEE--EESSEEEEEEEECTTSCEEEEEEEETTTT---EEEEEEEEETTEEEEEEEEEECCCCSSCE
T ss_pred eEEEECCC-CCEEEecc--CCCCcceEEEecccCCCCCEEEEEECCCC---eEEEEECCCCCccccceEEEECCCCCCCC
Confidence 67777766 54433322 33456889999 99855555555555 899999862111 122333343 56
Q ss_pred eeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 046451 267 VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 267 V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~ 340 (719)
+..+++++ +++++++...++.|.+||..+++.+..+..+...+.+++|++++..++++...++.|..|++...
T Consensus 228 p~~i~~d~-~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 228 ADGMDFDE-DNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEEEEEBT-TCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCceEECC-CCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 78899999 88888888788999999998787777777776789999999999336666667789999998753
No 191
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.52 E-value=3.7e-11 Score=123.51 Aligned_cols=279 Identities=10% Similarity=-0.034 Sum_probs=181.7
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
...+.+++++++|+++++...++.| .+||.+ +. ...+ ........+.++++.+++ .+
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v----------~~~~~~-~~-~~~~---~~~~~~~~~~~i~~~~~g--------~l 75 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKI----------SSLDQS-GR-IKEF---EVPTPDAKVMCLIVSSLG--------DI 75 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEE----------EEECTT-SC-EEEE---ECSSTTCCEEEEEECTTS--------CE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeE----------EEECCC-Cc-eEEE---ECCCCCCcceeEEECCCC--------CE
Confidence 4578899999999977776555554 455443 11 1111 111233568899999887 56
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCce-eeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLI-AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~-~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+++...++.|.+||.. + ... ..+......+.++++.+ +++++++...++.|..||.. ++.. .+. +
T Consensus 76 ~v~~~~~~~v~~~d~~-------g---~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~-~~~-~ 141 (300)
T 2qc5_A 76 WFTENGANKIGKLSKK-------G---GFTEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIY-EYD-L 141 (300)
T ss_dssp EEEETTTTEEEEECTT-------S---CEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEE-EEE-C
T ss_pred EEEecCCCeEEEECCC-------C---CeEEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-CCEE-Ecc-C
Confidence 7766667889999973 2 221 22222346789999998 77877777778899999986 3322 110 1
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
......+.++++++++ +++++...++.|.+||. +++............+..++++++| .++++....+ .|
T Consensus 142 ----~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~---~i 211 (300)
T 2qc5_A 142 ----PNKGSYPAFITLGSDN-ALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGN---KI 211 (300)
T ss_dssp ----SSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTT---EE
T ss_pred ----CCCCCCceeEEECCCC-CEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCC-CEEEEccCCC---EE
Confidence 1123478899999987 46666666789999998 5554332211344578899999988 4555555444 79
Q ss_pred EEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEE-EEecCCCCCeEEeEEcCCCCCEEE
Q 046451 246 RLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV-SELPAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~-~~l~~h~~~v~~l~~spdg~~~la 324 (719)
.+||. ++......+..+...+.++++++ +++++++...++.|.+||. +++.. ..+......+.++.++++| .+++
T Consensus 212 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v 287 (300)
T 2qc5_A 212 GRITT-TGEISEYDIPTPNARPHAITAGK-NSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDG-SVWF 287 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTS-CEEE
T ss_pred EEEcC-CCcEEEEECCCCCCCceEEEECC-CCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCC-CEEE
Confidence 99998 32211122333456788999998 7776666666799999998 45443 2234345568999999998 5666
Q ss_pred EEeCCCcEEEEeCC
Q 046451 325 ASSFDGKIGIYNIE 338 (719)
Q Consensus 325 s~s~Dg~I~iwd~~ 338 (719)
+.. + .|..+|.+
T Consensus 288 ~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 288 ALK-C-KIGKLNLN 299 (300)
T ss_dssp ECS-S-EEEEEEEC
T ss_pred Ecc-C-ceEEeCCC
Confidence 555 4 67766653
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.52 E-value=3.2e-13 Score=157.23 Aligned_cols=251 Identities=9% Similarity=-0.053 Sum_probs=160.1
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEE
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVA 88 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~la 88 (719)
.+.+++|||||++||.+...+. +....|++||+++++..... .. .......++|++|| +.|+
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G-----~~~~~i~v~dl~tg~~~~~~----~~-~~~~~~~~~wspDg--------~~l~ 183 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNA-----ADEAVLHVIDVDSGEWSKVD----VI-EGGKYATPKWTPDS--------KGFY 183 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETT-----CSCCEEEEEETTTCCBCSSC----CB-SCCTTCCCEECTTS--------SEEE
T ss_pred EEEEEEECCCCCEEEEEECCCC-----CceEEEEEEECCCCCCcCCc----cc-CcccccceEEecCC--------CEEE
Confidence 5788999999999997654221 23467899999876542000 01 11123689999998 6788
Q ss_pred EEcCCCc-------------EEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCC----cEEEE
Q 046451 89 GGLVDGS-------------IDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDG----EICIW 151 (719)
Q Consensus 89 sgs~dg~-------------I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg----~I~iw 151 (719)
.++.|.. |++|++.+... +. ..+.....|...+.++.|++ |+++|+.++.++ .|++|
T Consensus 184 ~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~--~~---~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~ 257 (695)
T 2bkl_A 184 YEWLPTDPSIKVDERPGYTTIRYHTLGTEPS--KD---TVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWK 257 (695)
T ss_dssp EEECCCCTTSCGGGGGGGCEEEEEETTSCGG--GC---EEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEE
T ss_pred EEEecCCCCCccccCCCCCEEEEEECCCCch--hc---eEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEE
Confidence 8877665 99999843210 01 23344445667889999999 778777777665 67777
Q ss_pred cCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe---CCCcEEEEECCCCce--eEEecCCC-CCceeEEEE
Q 046451 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS---YNGTTVVWDLKKQKP--VISFSESI-KRRCSVLQW 225 (719)
Q Consensus 152 dl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s---~dg~I~iwd~~~~~~--~~~~~~~~-~~~i~~l~~ 225 (719)
|..++. ... +.. +...+....| ++|. +++.+. .++.|.+||+.+++. ...+...+ ...+..++|
T Consensus 258 ~~~~~~-~~~---l~~----~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~ 327 (695)
T 2bkl_A 258 RPGEKD-FRL---LVK----GVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSI 327 (695)
T ss_dssp CTTCSS-CEE---EEE----CSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEE
T ss_pred cCCCCc-eEE---eec----CCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEE
Confidence 665443 222 221 2234455556 5665 665555 258899999987653 23333122 556788888
Q ss_pred CCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCC-CCCeeEEEeCCCCCCeEE-EEe---CCCcEEEEECCCCeE
Q 046451 226 NPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGH-TKGVIAMSWCPNDSSYLL-TCA---KDNRTICWDTVSGEI 299 (719)
Q Consensus 226 sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h-~~~V~~v~~sp~d~~~l~-sgs---~Dg~I~iwd~~~~~~ 299 (719)
+ + ..++++...++ ..+||.+......+..+..+ ...|..+.+++ +++.|+ +.+ ..++|++||+.+++.
T Consensus 328 ~-~-~~lv~~~~~dg---~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~-d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 328 V-G-GHLSLEYLKDA---TSEVRVATLKGKPVRTVQLPGVGAASNLMGLE-DLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp E-T-TEEEEEEEETT---EEEEEEEETTCCEEEECCCSSSSEECCCBSCT-TCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred E-C-CEEEEEEEECC---EEEEEEEeCCCCeeEEecCCCCeEEEEeecCC-CCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 8 3 36777777776 66776554223445556555 56778889999 666555 333 347899999988774
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.51 E-value=5e-12 Score=128.30 Aligned_cols=240 Identities=9% Similarity=0.020 Sum_probs=160.7
Q ss_pred ccceEEEcCCCCeEE-EeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceE
Q 046451 9 RSASVAFAPDAPYMA-AGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLV 87 (719)
Q Consensus 9 ~V~~vafSpdg~~La-tgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~l 87 (719)
...+++++++|++++ +.+.++.| .+|+....... .. .......+.+|++++++ +++
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i----------~~~~~~~~~~~----~~-~~~~~~~p~~i~~~~~g--------~l~ 81 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRV----------VKLATGSTGTT----VL-PFNGLYQPQGLAVDGAG--------TVY 81 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEE----------EEECC-----E----EC-CCCSCCSCCCEEECTTC--------CEE
T ss_pred CccceEECCCCCEEEEccCCCCcE----------EEecCCCcccc----eE-eeCCcCCcceeEECCCC--------CEE
Confidence 778999999999777 43444544 55654422111 11 12233567899999987 566
Q ss_pred EEEcCCCcEEEEcCCccccCCCCCCCCceeeec-cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCcc
Q 046451 88 AGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS-RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166 (719)
Q Consensus 88 asgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~ 166 (719)
++.. ++.|.+||... .....+. .....+.++++++ +++++++...++.|.+||..+......
T Consensus 82 v~~~-~~~i~~~d~~~----------~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~----- 144 (270)
T 1rwi_B 82 VTDF-NNRVVTLAAGS----------NNQTVLPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVL----- 144 (270)
T ss_dssp EEET-TTEEEEECTTC----------SCCEECCCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEEC-----
T ss_pred EEcC-CCEEEEEeCCC----------ceEeeeecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEee-----
Confidence 6655 88999999732 1222222 2335788999998 778877777789999997654332111
Q ss_pred CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEE
Q 046451 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALR 246 (719)
Q Consensus 167 ~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~ 246 (719)
.......+.+++++++| +++++...++.|.+||........... .....+.+|+++++| .++++...++ .|.
T Consensus 145 --~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~-~~~~~p~~i~~d~~g-~l~v~~~~~~---~v~ 216 (270)
T 1rwi_B 145 --PFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAESNNQVVLPF-TDITAPWGIAVDEAG-TVYVTEHNTN---QVV 216 (270)
T ss_dssp --CCCSCCSCCCEEECTTC-CEEEEEGGGTEEEEECTTTCCEEECCC-SSCCSEEEEEECTTC-CEEEEETTTS---CEE
T ss_pred --ccccCCCceeEEEeCCC-CEEEEECCCCEEEEEecCCCceEeecc-cCCCCceEEEECCCC-CEEEEECCCC---cEE
Confidence 01122357889999987 477777778899999988766543322 233678899999998 5666666565 799
Q ss_pred EEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe
Q 046451 247 LWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE 298 (719)
Q Consensus 247 lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~ 298 (719)
+||.... ........+...+.++++++ +++++++...+++|++|++...+
T Consensus 217 ~~~~~~~-~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 217 KLLAGST-TSTVLPFTGLNTPLAVAVDS-DRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EECTTCS-CCEECCCCSCSCEEEEEECT-TCCEEEEEGGGTEEEEECCCGGG
T ss_pred EEcCCCC-cceeeccCCCCCceeEEECC-CCCEEEEECCCCEEEEEcCCCcc
Confidence 9998653 22222223346789999999 78888888899999999986544
No 194
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.50 E-value=2.9e-11 Score=129.29 Aligned_cols=282 Identities=8% Similarity=-0.090 Sum_probs=179.7
Q ss_pred EEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEc--
Q 046451 14 AFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGL-- 91 (719)
Q Consensus 14 afSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs-- 91 (719)
...+|++++.+....+.- ....+.+||....+.... +.....- .++|++|+ ++|+++.
T Consensus 27 ~~~~~~~~~yv~~~~~~~-----~~~~v~v~D~~t~~~~~~------i~~g~~p-~i~~spDg--------~~lyv~n~~ 86 (373)
T 2mad_H 27 APGADGRRSYINLPAHHS-----AIIQQWVLDAGSGSILGH------VNGGFLP-NPVAAHSG--------SEFALASTS 86 (373)
T ss_pred cCCCCCCEEEEeCCcccC-----CccEEEEEECCCCeEEEE------ecCCCCC-CeEECCCC--------CEEEEEecc
Confidence 455788877666431110 000568888875543222 2222233 89999998 5666664
Q ss_pred --------CCCcEEEEcCCccccCCCCCCCCceeeeccc-------cCCEEEEEEeCCCCCEEEEEeC--CCcEEEEcCC
Q 046451 92 --------VDGSIDIWNPLSLISSGETGGNPLIAHLSRH-------KGPVRGLEFNSFTPNLLASGAD--DGEICIWDLS 154 (719)
Q Consensus 92 --------~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h-------~~~V~~l~fsp~~~~~lasgs~--dg~I~iwdl~ 154 (719)
.++.|.+||.. +. +.+..+... ...-..+.|++ |+++|+++.. ++.|.++| .
T Consensus 87 ~~~~~rg~~~~~v~viD~~------t~---~~~~~i~~~~~~~~~~g~~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~ 155 (373)
T 2mad_H 87 FSRIAKGKRTDYVEVFDPV------TF---LPIADIELPDAPRFDVGPYSWMNANTP-NNADLLFFQFAAGPAVGLVV-Q 155 (373)
T ss_pred ccccccCCCCCeEEEEECC------CC---cEEEEEECCCccccccCCCccceEECC-CCCEEEEEecCCCCeEEEEE-C
Confidence 36789999984 33 333333211 12345889999 7888888764 57899999 8
Q ss_pred CCCCCCc-cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec-----CCCCCceeEEEECCC
Q 046451 155 APAEPSH-FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS-----ESIKRRCSVLQWNPD 228 (719)
Q Consensus 155 ~~~~~~~-~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~-----~~~~~~i~~l~~sp~ 228 (719)
+++.... +. + . .++.+.+++.+.+++.+.||.+.+||. +++.+.... ...........+.++
T Consensus 156 t~~~~~~~i~-~-------~---~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 156 GGSSDDQLLS-S-------P---TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred CCCEEeEEcC-C-------C---ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence 8765443 21 1 1 124555666667888889999999999 777663322 011111223456666
Q ss_pred CCcEEEEEeCCCCCCcEEEEecCCCCC-ceEEeeC----------CCCCeeEEEeCCCCCCeEEEEeC----------CC
Q 046451 229 VATQLVVASDEDSSPALRLWDMRNTMS-PVKEFVG----------HTKGVIAMSWCPNDSSYLLTCAK----------DN 287 (719)
Q Consensus 229 g~~~l~~~s~d~~~~~I~lwDl~~~~~-~~~~~~~----------h~~~V~~v~~sp~d~~~l~sgs~----------Dg 287 (719)
+..++++. ..+ .+.+.|+..... .+..+.. .......+.+++ +++.|++... ++
T Consensus 224 ~~~~~~~~-~~~---~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~-d~~~lyV~~~~~~~~~~~~~~~ 298 (373)
T 2mad_H 224 SGRIVWPV-YSG---KILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLK-SSDGIYLLTSEQSAWKLHAAAK 298 (373)
T ss_pred CCEEEEEc-CCc---eEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECC-CCCEEEEEeccCCcccccCCCC
Confidence 65555555 444 799999865321 1222211 112344478899 7776666543 35
Q ss_pred cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEe-CCCcEEEEeCCCCcccc
Q 046451 288 RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASS-FDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 288 ~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s-~Dg~I~iwd~~~~~~~~ 344 (719)
.|.++|+.+++.+.++.... ...++.|++||+.+++++. .++.|.+||+.+++.+.
T Consensus 299 ~V~VID~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 299 EVTSVTGLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred eEEEEECCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence 89999999999999986544 4889999999953677776 58999999999998865
No 195
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.49 E-value=1.1e-12 Score=138.52 Aligned_cols=226 Identities=17% Similarity=0.146 Sum_probs=147.9
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEc---------CCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCC
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGL---------VDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFT 135 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs---------~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~ 135 (719)
..+..++| || +.|+... .++.|.+||+. .+ . ...+ ..+..++|+| |
T Consensus 15 ~~~~~~~~--dG--------~~i~~~~~~~~~~~~~~~~~l~~~d~~------~~---~-~~~l----~~~~~~~~Sp-D 69 (347)
T 2gop_A 15 AYLSDPRT--KG--------ELVAYVLTKANLKDNKYENTIVIENLK------NN---A-RRFI----ENATMPRISP-D 69 (347)
T ss_dssp CEEEEEEE--ET--------TEEEEEEEEEETTTTEEEEEEEEEETT------TC---C-EEEE----ESCEEEEECT-T
T ss_pred EEcccceE--CC--------cEEEEEEeecCcccCCccceEEEEeCC------CC---c-eEEc----ccCCCeEECC-C
Confidence 45567777 66 4554431 25678999983 22 2 2233 5678899999 7
Q ss_pred CCEEEEEeCC---C--cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC----------------
Q 046451 136 PNLLASGADD---G--EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY---------------- 194 (719)
Q Consensus 136 ~~~lasgs~d---g--~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~---------------- 194 (719)
+++|+.++.+ + .|++||+.+++.... .. +.. +..+.|+++|. .|+.++.
T Consensus 70 g~~la~~~~~~~~~~~~l~~~~~~~g~~~~l---~~-----~~~-~~~~~wspdg~-~l~~~~~~~~~~~~~~~~~~~~~ 139 (347)
T 2gop_A 70 GKKIAFMRANEEKKVSEIWVADLETLSSKKI---LE-----AKN-IRSLEWNEDSR-KLLIVGFKRREDEDFIFEDDVPA 139 (347)
T ss_dssp SSEEEEEEEETTTTEEEEEEEETTTTEEEEE---EE-----ESE-EEEEEECTTSS-EEEEEEECCCC---------CCC
T ss_pred CCEEEEEEeccCCCcceEEEEECCCCceEEE---Ec-----CCC-ccceeECCCCC-EEEEEEccCCCcCCcEEEcccce
Confidence 8888877654 3 388888876543222 11 122 88999999985 5555442
Q ss_pred -----------CCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCC---C-cEEEEecCCCCCceEE
Q 046451 195 -----------NGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSS---P-ALRLWDMRNTMSPVKE 259 (719)
Q Consensus 195 -----------dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~---~-~I~lwDl~~~~~~~~~ 259 (719)
...|++||+.+++.+..+. . . .+..++|+++| +++++..+... . ...||.+.+ .+ ...
T Consensus 140 ~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~-~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~-~~-~~~ 212 (347)
T 2gop_A 140 WFDDLGFFDGEKTTFWIFDTESEEVIEEFE-K-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWED-GK-EEK 212 (347)
T ss_dssp C---------CEEEEEEEETTTTEEEEEEE-E-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEET-TE-EEE
T ss_pred eecCcccccCccceEEEEECCCCeEEeeec-C-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCC-Cc-eEE
Confidence 2579999999887755565 2 3 78899999998 56666544210 1 234444432 22 344
Q ss_pred eeCCCCCeeEEEeCCCCCCeEEEEeCC--------CcEEEEECCCCeEEEEecCCCCCeEE-eEEcCCCCCEEEEEeCCC
Q 046451 260 FVGHTKGVIAMSWCPNDSSYLLTCAKD--------NRTICWDTVSGEIVSELPAGTNWNFD-IHWYPKIPGVISASSFDG 330 (719)
Q Consensus 260 ~~~h~~~V~~v~~sp~d~~~l~sgs~D--------g~I~iwd~~~~~~~~~l~~h~~~v~~-l~~spdg~~~las~s~Dg 330 (719)
+..+ ..+..+ +| |+++|+.++.+ ..|.+|| +++....+..+...+.. +.|+ |+ ++++++.++
T Consensus 213 l~~~-~~~~~~--sp-dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~ 283 (347)
T 2gop_A 213 MFEK-VSFYAV--DS-DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEG 283 (347)
T ss_dssp EEEE-ESEEEE--EE-CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE--EEEEEEETT
T ss_pred eccC-cceeeE--CC-CCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc--EEEEEecCC
Confidence 4444 455544 88 88888777644 4688888 66665555566677886 9999 76 888999999
Q ss_pred cEEEEeCCCCcc
Q 046451 331 KIGIYNIEGCSR 342 (719)
Q Consensus 331 ~I~iwd~~~~~~ 342 (719)
.++|| +.+++.
T Consensus 284 ~~~l~-~~~g~~ 294 (347)
T 2gop_A 284 SVNLY-IWDGEI 294 (347)
T ss_dssp EEEEE-EESSSE
T ss_pred cEEEE-EcCCce
Confidence 99999 875543
No 196
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.48 E-value=2.7e-12 Score=149.87 Aligned_cols=253 Identities=14% Similarity=0.069 Sum_probs=162.5
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEE
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVA 88 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~la 88 (719)
.+..++|||||++||.+..++. +....|++||++.++..... . ....+.+++|++|| +.|+
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G-----~~~~~i~v~d~~tg~~~~~~--~----~~~~~~~~~wspDg--------~~l~ 186 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASG-----SDWVTIKFMKVDGAKELPDV--L----ERVKFSCMAWTHDG--------KGMF 186 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETT-----CSCEEEEEEETTTTEEEEEE--E----EEECSCCEEECTTS--------SEEE
T ss_pred EEEEEEECCCCCEEEEEEcCCC-----CceEEEEEEECCCCCCCccc--c----cCcccceEEEEeCC--------CEEE
Confidence 4778999999999998765431 12236799998865432211 1 11236789999998 6777
Q ss_pred EEcCCCc----------------EEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC-----CCc
Q 046451 89 GGLVDGS----------------IDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD-----DGE 147 (719)
Q Consensus 89 sgs~dg~----------------I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~-----dg~ 147 (719)
.++.++. |++|++.+... +. ..+.....|...+..+.|++ |+++|+.++. +..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~--~~---~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~ 260 (710)
T 2xdw_A 187 YNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQS--ED---ILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNR 260 (710)
T ss_dssp EEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGG--GC---EEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCE
T ss_pred EEEECCccccccccccccCCCCEEEEEECCCCcc--cc---eEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccE
Confidence 7776655 99999843110 00 12223333566688999999 7888877664 578
Q ss_pred EEEEcCCC------CC-CCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC---CcEEEEECCCCce--eEEecCC
Q 046451 148 ICIWDLSA------PA-EPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN---GTTVVWDLKKQKP--VISFSES 215 (719)
Q Consensus 148 I~iwdl~~------~~-~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d---g~I~iwd~~~~~~--~~~~~~~ 215 (719)
|++||+.+ +. .... +.. +...+.. .|+++|..+++.+..+ +.|.+||+.++.. ...+...
T Consensus 261 l~~~d~~~~~~~~~~~~~~~~---l~~----~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 332 (710)
T 2xdw_A 261 LWYCDLQQESNGITGILKWVK---LID----NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE 332 (710)
T ss_dssp EEEEEGGGSSSSSCSSCCCEE---EEC----SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC
T ss_pred EEEEECcccccccCCccceEE---eeC----CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCC
Confidence 99999976 32 2222 222 2223333 4778876555555443 3799999987642 2333312
Q ss_pred CC-CceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEE-EEe---CCCcEE
Q 046451 216 IK-RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLL-TCA---KDNRTI 290 (719)
Q Consensus 216 ~~-~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~-sgs---~Dg~I~ 290 (719)
.. ..+..++|++++ .++++...++. ..|++||+.++ +.+..+..+...+..+.+++ ++..|+ +.+ ..++|+
T Consensus 333 ~~~~~~~~~~~~~~~-~lv~~~~~~g~-~~l~~~~~~~g-~~~~~l~~~~~~v~~~~~s~-d~~~l~~~~ss~~~P~~i~ 408 (710)
T 2xdw_A 333 HEKDVLEWVACVRSN-FLVLCYLHDVK-NTLQLHDLATG-ALLKIFPLEVGSVVGYSGQK-KDTEIFYQFTSFLSPGIIY 408 (710)
T ss_dssp CSSCEEEEEEEETTT-EEEEEEEETTE-EEEEEEETTTC-CEEEEECCCSSEEEEEECCT-TCSEEEEEEECSSCCCEEE
T ss_pred CCCCeEEEEEEEcCC-EEEEEEEECCE-EEEEEEECCCC-CEEEecCCCCceEEEEecCC-CCCEEEEEEeCCCCCCEEE
Confidence 22 368889998554 56777776651 24677787554 45677777777888999999 665554 333 347899
Q ss_pred EEECCCCe
Q 046451 291 CWDTVSGE 298 (719)
Q Consensus 291 iwd~~~~~ 298 (719)
+||+.+++
T Consensus 409 ~~d~~tg~ 416 (710)
T 2xdw_A 409 HCDLTKEE 416 (710)
T ss_dssp EEETTSSS
T ss_pred EEECCCCc
Confidence 99998876
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.48 E-value=8.8e-11 Score=120.57 Aligned_cols=239 Identities=11% Similarity=-0.015 Sum_probs=166.6
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCcee-eeccccCCEEEEEEeCCCCCEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIA-HLSRHKGPVRGLEFNSFTPNLLAS 141 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~-~l~~h~~~V~~l~fsp~~~~~las 141 (719)
....+.++++.+++ .++++...++.|.+||.. + .... .+..+...+.++++++ +++++++
T Consensus 13 ~~~~~~~i~~d~~g--------~l~v~~~~~~~v~~~d~~-------~---~~~~~~~~~~~~~~~~i~~~~-~g~l~v~ 73 (299)
T 2z2n_A 13 QDTGPYGITVSDKG--------KVWITQHKANMISCINLD-------G---KITEYPLPTPDAKVMCLTISS-DGEVWFT 73 (299)
T ss_dssp SSCCEEEEEECTTS--------CEEEEETTTTEEEEECTT-------C---CEEEEECSSTTCCEEEEEECT-TSCEEEE
T ss_pred cCCCccceEECCCC--------CEEEEecCCCcEEEEcCC-------C---CeEEecCCcccCceeeEEECC-CCCEEEe
Confidence 34578899999987 566666668899999973 2 2221 2223456789999998 7787777
Q ss_pred EeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCcee
Q 046451 142 GADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCS 221 (719)
Q Consensus 142 gs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~ 221 (719)
...++.|..||.. ++ ...+ .. ......+.+++++++| .++++...++.|.+||. +++............+.
T Consensus 74 ~~~~~~i~~~~~~-g~-~~~~---~~--~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~ 144 (299)
T 2z2n_A 74 ENAANKIGRITKK-GI-IKEY---TL--PNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPS 144 (299)
T ss_dssp ETTTTEEEEECTT-SC-EEEE---EC--SSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEE
T ss_pred CCCCCeEEEECCC-Cc-EEEE---eC--CCcCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCEEEecCCCCCCCCc
Confidence 7778899999976 22 2221 11 1123478999999987 57777667889999998 55443322213456789
Q ss_pred EEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceE-EeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEE
Q 046451 222 VLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVK-EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIV 300 (719)
Q Consensus 222 ~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~-~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~ 300 (719)
.++++++| .++++...++ .|.+||. ++ +... .+..+...+.++++++ +++++++...++.|.+||. +++..
T Consensus 145 ~i~~~~~g-~l~v~~~~~~---~i~~~~~-~g-~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~ 216 (299)
T 2z2n_A 145 FITLGSDN-ALWFTENQNN---AIGRITE-SG-DITEFKIPTPASGPVGITKGN-DDALWFVEIIGNKIGRITT-SGEIT 216 (299)
T ss_dssp EEEECTTS-CEEEEETTTT---EEEEECT-TC-CEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEE
T ss_pred eEEEcCCC-CEEEEeCCCC---EEEEEcC-CC-cEEEeeCCCCCCcceeEEECC-CCCEEEEccCCceEEEECC-CCcEE
Confidence 99999998 4566555444 7999998 43 3222 1233455788999998 7777776667889999999 66644
Q ss_pred EE-ecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 301 SE-LPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 301 ~~-l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
.. +..+...+.+++++++| .++++...++.|.+||..
T Consensus 217 ~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 217 EFKIPTPNARPHAITAGAGI-DLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp EEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEEETT
T ss_pred EEECCCCCCCceeEEECCCC-CEEEeccCCceEEEECCC
Confidence 32 33455679999999998 677777678999999984
No 198
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.46 E-value=1.6e-11 Score=126.83 Aligned_cols=236 Identities=10% Similarity=0.012 Sum_probs=157.8
Q ss_pred cCccceEEEcCCCC-eEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccc
Q 046451 7 INRSASVAFAPDAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 7 ~~~V~~vafSpdg~-~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
.....+++|+++|+ +++++..++.| .+|+.+.+ ...+ ..+...+.+++|++++ +
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i----------~~~~~~~~--~~~~-----~~~~~~~~~l~~~~dg--------~ 81 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRT----------WAWSDDGQ--LSPE-----MHPSHHQNGHCLNKQG--------H 81 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEE----------EEEETTSC--EEEE-----ESSCSSEEEEEECTTC--------C
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEE----------EEEECCCC--eEEE-----ECCCCCcceeeECCCC--------c
Confidence 34567899999998 77777666655 66766543 1111 1245678999999998 6
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc----ccCCEEEEEEeCCCCCEEEEE----e-------------C
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR----HKGPVRGLEFNSFTPNLLASG----A-------------D 144 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~----h~~~V~~l~fsp~~~~~lasg----s-------------~ 144 (719)
++++...++.|.+||. .++ +....... ....+.++++++ +++++++. + .
T Consensus 82 l~v~~~~~~~i~~~d~------~~g---~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~ 151 (296)
T 3e5z_A 82 LIACSHGLRRLERQRE------PGG---EWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELP 151 (296)
T ss_dssp EEEEETTTTEEEEECS------TTC---CEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSS
T ss_pred EEEEecCCCeEEEEcC------CCC---cEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCC
Confidence 7777777789999998 333 32222211 123567899999 78888873 2 1
Q ss_pred CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC-CCce---eEEecCCCCCce
Q 046451 145 DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK-KQKP---VISFSESIKRRC 220 (719)
Q Consensus 145 dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~-~~~~---~~~~~~~~~~~i 220 (719)
.+.|..+|.. ++ ... +. .+......++|++++. +|++.+.++.|++||+. +++. ...+ ......+
T Consensus 152 ~~~l~~~~~~-g~-~~~---~~----~~~~~~~gi~~s~dg~-~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p 220 (296)
T 3e5z_A 152 GRWVFRLAPD-GT-LSA---PI----RDRVKPNGLAFLPSGN-LLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKT 220 (296)
T ss_dssp SCEEEEECTT-SC-EEE---EE----CCCSSEEEEEECTTSC-EEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCC
T ss_pred CcEEEEECCC-CC-EEE---ee----cCCCCCccEEECCCCC-EEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCC
Confidence 3456666654 22 211 11 1234678999999985 55777788999999997 4544 2333 2455667
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEe-CCCCCCeEEEEeCCCcEEEEECCCCeE
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSW-CPNDSSYLLTCAKDNRTICWDTVSGEI 299 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~-sp~d~~~l~sgs~Dg~I~iwd~~~~~~ 299 (719)
..++++++|. ++++. ++ .|.+||.. .+.+..+..+.. +.+++| ++ +++.|++++.+ .+..++..+.++
T Consensus 221 ~~i~~d~~G~-l~v~~--~~---~v~~~~~~--g~~~~~~~~~~~-~~~~~f~~~-d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 221 DGLRVDAGGL-IWASA--GD---GVHVLTPD--GDELGRVLTPQT-TSNLCFGGP-EGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp CSEEEBTTSC-EEEEE--TT---EEEEECTT--SCEEEEEECSSC-CCEEEEEST-TSCEEEEEETT-EEEEEECSCCBC
T ss_pred CeEEECCCCC-EEEEc--CC---eEEEECCC--CCEEEEEECCCC-ceeEEEECC-CCCEEEEEcCC-eEEEEEcccccc
Confidence 8899999984 55555 44 79999986 356677777777 999999 56 88888888765 455667765543
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.45 E-value=1.6e-11 Score=125.70 Aligned_cols=213 Identities=12% Similarity=0.032 Sum_probs=160.4
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecccc-CCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHK-GPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
++|++++.|+.|.+||. +++ +.+.++..+. ..+.++.+++ ++++|+ +.++.|+.||. +++.+..+
T Consensus 6 ~~lv~~~~~~~v~~~d~------~tG---~~~w~~~~~~~~~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~G~~~W~~- 71 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINK------DTK---EIVWEYPLEKGWECNSVAATK-AGEILF--SYSKGAKMITR-DGRELWNI- 71 (276)
T ss_dssp EEEEECTTCSEEEEEET------TTT---EEEEEEECCTTCCCCEEEECT-TSCEEE--ECBSEEEEECT-TSCEEEEE-
T ss_pred cEEEeeCCCCEEEEEEC------CCC---eEEEEeCCCccCCCcCeEECC-CCCEEE--eCCCCEEEECC-CCCEEEEE-
Confidence 79999999999999998 567 7888887766 4788999999 788888 45778999998 67655443
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeC-CCcEEEEECCCCceeEEecCC-----CCCceeEEEECCCCCcEEEEEe
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSY-NGTTVVWDLKKQKPVISFSES-----IKRRCSVLQWNPDVATQLVVAS 237 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~-dg~I~iwd~~~~~~~~~~~~~-----~~~~i~~l~~sp~g~~~l~~~s 237 (719)
.. .....+.++.+.++| +++++.+. ++.|..+|. +++.+.++... .......+++.++|. ++++..
T Consensus 72 --~~---~~~~~~~~~~~~~dG-~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~ 143 (276)
T 3no2_A 72 --AA---PAGCEMQTARILPDG-NALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLF 143 (276)
T ss_dssp --EC---CTTCEEEEEEECTTS-CEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEET
T ss_pred --cC---CCCccccccEECCCC-CEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCC-EEEEec
Confidence 21 122368889999998 57777776 788888886 67776666421 112345667888984 677777
Q ss_pred CCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCC------CCCeE
Q 046451 238 DEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAG------TNWNF 311 (719)
Q Consensus 238 ~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h------~~~v~ 311 (719)
.++ .|.+||.. + +.+.++..+ ....++.+.+ ++++|++++.+++|..||..+|+.+.++..+ ...+.
T Consensus 144 ~~~---~v~~~d~~-G-~~~w~~~~~-~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~ 216 (276)
T 3no2_A 144 ATS---EVREIAPN-G-QLLNSVKLS-GTPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVA 216 (276)
T ss_dssp TTT---EEEEECTT-S-CEEEEEECS-SCCCEEEECT-TSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEE
T ss_pred CCC---EEEEECCC-C-CEEEEEECC-CCccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccc
Confidence 666 89999986 4 566666654 4566778888 8899998888889999999999999988642 23478
Q ss_pred EeEEcCCCCCEEEEEe
Q 046451 312 DIHWYPKIPGVISASS 327 (719)
Q Consensus 312 ~l~~spdg~~~las~s 327 (719)
.+...++| .++++..
T Consensus 217 ~~~~~~~G-~i~v~~~ 231 (276)
T 3no2_A 217 QLFPLQNG-GLYICNW 231 (276)
T ss_dssp EEEECTTS-CEEEEEE
T ss_pred cceEcCCC-CEEEEec
Confidence 88999998 6777764
No 200
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.43 E-value=4.2e-10 Score=115.53 Aligned_cols=269 Identities=9% Similarity=-0.016 Sum_probs=179.1
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCcee-eeccccCCEEEEEEeCCCCCEEEEE
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIA-HLSRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~-~l~~h~~~V~~l~fsp~~~~~lasg 142 (719)
...+.+|++.+++ .++++...++.|.+||.. + .... .+..+...+.++++++ +++++++.
T Consensus 19 ~~~p~~i~~d~~g--------~l~v~~~~~~~v~~~~~~-------~---~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~ 79 (300)
T 2qc5_A 19 DSGPYGITSSEDG--------KVWFTQHKANKISSLDQS-------G---RIKEFEVPTPDAKVMCLIVSS-LGDIWFTE 79 (300)
T ss_dssp TCCEEEEEECTTS--------CEEEEETTTTEEEEECTT-------S---CEEEEECSSTTCCEEEEEECT-TSCEEEEE
T ss_pred CCCcceeeECCCC--------CEEEEcCCCCeEEEECCC-------C---ceEEEECCCCCCcceeEEECC-CCCEEEEe
Confidence 4567899999987 577777678999999973 2 2221 2223346789999988 67777777
Q ss_pred eCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeE
Q 046451 143 ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSV 222 (719)
Q Consensus 143 s~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~ 222 (719)
..++.|.+||.. ++. ..+ .. ......+.+++++++| +++++...++.|..||.. ++............+..
T Consensus 80 ~~~~~v~~~d~~-g~~-~~~---~~--~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~ 150 (300)
T 2qc5_A 80 NGANKIGKLSKK-GGF-TEY---PL--PQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAF 150 (300)
T ss_dssp TTTTEEEEECTT-SCE-EEE---EC--SSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEE
T ss_pred cCCCeEEEECCC-CCe-EEe---cC--CCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCEEEccCCCCCCCcee
Confidence 668899999987 432 221 11 1122468999999887 577766668899999987 55442222134567899
Q ss_pred EEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceE-EeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEE
Q 046451 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVK-EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVS 301 (719)
Q Consensus 223 l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~-~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~ 301 (719)
+++++++. ++++...++ .|.+||. ++ +... .+..+...+.++++.+ +++++++...++.|.+||. +++...
T Consensus 151 i~~d~~g~-l~v~~~~~~---~i~~~~~-~g-~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~ 222 (300)
T 2qc5_A 151 ITLGSDNA-LWFTENQNN---SIGRITN-TG-KLEEYPLPTNAAAPVGITSGN-DGALWFVEIMGNKIGRITT-TGEISE 222 (300)
T ss_dssp EEECTTSS-EEEEETTTT---EEEEECT-TC-CEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEE
T ss_pred EEECCCCC-EEEEecCCC---eEEEECC-CC-cEEEeeCCCCCCCcceEEECC-CCCEEEEccCCCEEEEEcC-CCcEEE
Confidence 99999985 555554454 7999998 33 2222 2223445788999998 7777776666788999998 555433
Q ss_pred E-ecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEcc
Q 046451 302 E-LPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHP 380 (719)
Q Consensus 302 ~-l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~ 380 (719)
. +..+...+.+++++++| .++++...++.|.+||.. ++..... +. .-...+.+++++.+|++..-..
T Consensus 223 ~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~---~~-------~~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 223 YDIPTPNARPHAITAGKNS-EIWFTEWGANQIGRITND-NTIQEYQ---LQ-------TENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp EECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCEEEEE---CC-------STTCCCCCEEECTTSCEEEECS
T ss_pred EECCCCCCCceEEEECCCC-CEEEeccCCCeEEEECCC-CcEEEEE---CC-------ccCCccceeEeCCCCCEEEEcc
Confidence 2 44455678999999998 677777667999999984 4332210 00 0112346677888888665443
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.41 E-value=2.2e-11 Score=125.99 Aligned_cols=231 Identities=10% Similarity=0.133 Sum_probs=152.6
Q ss_pred ceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCC
Q 046451 67 FNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDG 146 (719)
Q Consensus 67 V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg 146 (719)
..+..|++++. .++++...++.|+.||.. ++ . ...+ .....+.+++|++ +++++++ . ++
T Consensus 15 ~Egp~w~~~~~-------~l~~~d~~~~~i~~~d~~------~~---~-~~~~-~~~~~~~~i~~~~-dG~l~v~-~-~~ 73 (297)
T 3g4e_A 15 GESPVWEEVSN-------SLLFVDIPAKKVCRWDSF------TK---Q-VQRV-TMDAPVSSVALRQ-SGGYVAT-I-GT 73 (297)
T ss_dssp EEEEEEETTTT-------EEEEEETTTTEEEEEETT------TC---C-EEEE-ECSSCEEEEEEBT-TSSEEEE-E-TT
T ss_pred ccCCeEECCCC-------EEEEEECCCCEEEEEECC------CC---c-EEEE-eCCCceEEEEECC-CCCEEEE-E-CC
Confidence 34889998642 677888888999999983 22 2 2222 2456799999999 6775554 4 56
Q ss_pred cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC---------CcEEEEECCC-CceeEEecCCC
Q 046451 147 EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN---------GTTVVWDLKK-QKPVISFSESI 216 (719)
Q Consensus 147 ~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d---------g~I~iwd~~~-~~~~~~~~~~~ 216 (719)
.|.+||..+++.... ...........+++++++++|. ++++...+ ....||.+.. ++... +. ..
T Consensus 74 ~l~~~d~~~g~~~~~---~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~-~~ 147 (297)
T 3g4e_A 74 KFCALNWKEQSAVVL---ATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YF-DQ 147 (297)
T ss_dssp EEEEEETTTTEEEEE---EECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EE-EE
T ss_pred eEEEEECCCCcEEEE---EecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCCEEE-Ee-ec
Confidence 899999887543211 1110111123588999999984 55544221 2234554443 33322 22 23
Q ss_pred CCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecC-CCCCc-----eEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEE
Q 046451 217 KRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR-NTMSP-----VKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTI 290 (719)
Q Consensus 217 ~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~-~~~~~-----~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~ 290 (719)
....+.++|+++++.++++.+.++ .|.+||+. ..... +..+..+......+++.+ ++++.++...++.|.
T Consensus 148 ~~~pngi~~spdg~~lyv~~~~~~---~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~lwva~~~~~~v~ 223 (297)
T 3g4e_A 148 VDISNGLDWSLDHKIFYYIDSLSY---SVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKLWVACYNGGRVI 223 (297)
T ss_dssp ESBEEEEEECTTSCEEEEEEGGGT---EEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCEEEEEETTTEEE
T ss_pred cccccceEEcCCCCEEEEecCCCC---cEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCEEEEEcCCCEEE
Confidence 455688999999976666666665 89999974 22221 122223345678899998 788887777788999
Q ss_pred EEECCCCeEEEEecCCCCCeEEeEEc-CCCCCEEEEEeC
Q 046451 291 CWDTVSGEIVSELPAGTNWNFDIHWY-PKIPGVISASSF 328 (719)
Q Consensus 291 iwd~~~~~~~~~l~~h~~~v~~l~~s-pdg~~~las~s~ 328 (719)
+||..+++.+..+..+...+++++|. +++..++++...
T Consensus 224 ~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 224 RLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred EEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 99999999999998887789999998 787555555543
No 202
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.41 E-value=1.8e-11 Score=128.60 Aligned_cols=236 Identities=10% Similarity=0.033 Sum_probs=155.7
Q ss_pred ceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceee
Q 046451 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH 118 (719)
Q Consensus 39 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~ 118 (719)
+.|.+||..+.+....+ ........+++++++ .++++...++.|.+||. .++ +....
T Consensus 64 ~~v~viD~~t~~~~~~i------~~~~~p~~i~~~~~g--------~lyv~~~~~~~v~~iD~------~t~---~~~~~ 120 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRI------TGFTSPRYIHFLSDE--------KAYVTQIWDYRIFIINP------KTY---EITGY 120 (328)
T ss_dssp TEEEEEETTTCCEEEEE------ECCSSEEEEEEEETT--------EEEEEEBSCSEEEEEET------TTT---EEEEE
T ss_pred CEEEEEECcccEEEEEc------CCCCCCcEEEEeCCC--------eEEEEECCCCeEEEEEC------CCC---eEEEE
Confidence 44588888765433322 234667899998886 55555558999999998 333 44444
Q ss_pred ecccc-----CCEEEEEEeCCCCCEEEEEe-CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEE
Q 046451 119 LSRHK-----GPVRGLEFNSFTPNLLASGA-DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILAST 192 (719)
Q Consensus 119 l~~h~-----~~V~~l~fsp~~~~~lasgs-~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~ 192 (719)
+.... .....+++ . ++.++++.. .++.|.+||+.+++....+ .. ......+.++++| ++++++
T Consensus 121 i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i---~~-----g~~p~~i~~~~dG-~l~v~~ 189 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDEL---TI-----GIQPTSLVMDKYN-KMWTIT 189 (328)
T ss_dssp EECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEE---EC-----SSCBCCCEECTTS-EEEEEB
T ss_pred EEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEE---Ec-----CCCccceEEcCCC-CEEEEE
Confidence 43222 14567777 2 444455444 4899999999987755443 11 1235678889987 466665
Q ss_pred eCC----------CcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEE-ee
Q 046451 193 SYN----------GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE-FV 261 (719)
Q Consensus 193 s~d----------g~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~-~~ 261 (719)
..+ +.|.+||..+++....+..........++|+++++.++++ .. .|.+||..+....... +.
T Consensus 190 ~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~-~~-----~v~~~d~~t~~~~~~~~~~ 263 (328)
T 3dsm_A 190 DGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWI-NN-----DIWRMPVEADRVPVRPFLE 263 (328)
T ss_dssp CCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEE-SS-----SEEEEETTCSSCCSSCSBC
T ss_pred CCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEE-cc-----EEEEEECCCCceeeeeeec
Confidence 544 7899999999988777663234578999999998654443 32 5999999765321111 22
Q ss_pred CCCCCeeEEEeCCCCCCeEEEE----eCCCcEEEEECCCCeEEEEecCCCCCeEEeEEc
Q 046451 262 GHTKGVIAMSWCPNDSSYLLTC----AKDNRTICWDTVSGEIVSELPAGTNWNFDIHWY 316 (719)
Q Consensus 262 ~h~~~V~~v~~sp~d~~~l~sg----s~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~s 316 (719)
.+......++++|+++.++++. ..++.|.+||.. ++.+.++..... -..++|-
T Consensus 264 ~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~-P~~~~~~ 320 (328)
T 3dsm_A 264 FRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGII-PGAFCWK 320 (328)
T ss_dssp CCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEES-EEEEEEE
T ss_pred CCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEeccC-cceEEEe
Confidence 2245788999998566666666 578999999997 998888864322 4555553
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.39 E-value=9.6e-11 Score=127.01 Aligned_cols=240 Identities=14% Similarity=0.097 Sum_probs=162.0
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
.....|+|++++ +++++...++.|++||.. .+ ........ ..... ++|++ ++++|+++..
T Consensus 131 ~~P~~la~d~~g--------~lyv~d~~~~~I~~id~~------~g---~~~~~~~~-~~~~~-ia~~~-~g~~l~~~d~ 190 (409)
T 3hrp_A 131 KYMWGIAAVGNN--------TVLAYQRDDPRVRLISVD------DN---KVTTVHPG-FKGGK-PAVTK-DKQRVYSIGW 190 (409)
T ss_dssp CCEEEEEECSTT--------EEEEEETTTTEEEEEETT------TT---EEEEEEET-CCBCB-CEECT-TSSEEEEEBS
T ss_pred CCceEEEEeCCC--------CEEEEecCCCcEEEEECC------CC---EEEEeecc-CCCCc-eeEec-CCCcEEEEec
Confidence 356789999887 677777778999999983 22 22222222 23334 89999 7788888887
Q ss_pred CC--cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEE----ecCCCCC
Q 046451 145 DG--EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS----FSESIKR 218 (719)
Q Consensus 145 dg--~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~----~~~~~~~ 218 (719)
++ .|.+||.........+ ..........+.++++++++.. |+++..++.|+.||..++..... .. ....
T Consensus 191 ~~~~~I~~~d~~~~~~~~~~---g~~~~~~~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~~~~~~~~~~~~~-g~~~ 265 (409)
T 3hrp_A 191 EGTHTVYVYMKASGWAPTRI---GQLGSTFSGKIGAVALDETEEW-LYFVDSNKNFGRFNVKTQEVTLIKQLELS-GSLG 265 (409)
T ss_dssp STTCEEEEEEGGGTTCEEEE---EECCTTSCSCCCBCEECTTSSE-EEEECTTCEEEEEETTTCCEEEEEECCCC-SCCC
T ss_pred CCCceEEEEEcCCCceeEEe---eeccchhcCCcEEEEEeCCCCe-EEEEECCCcEEEEECCCCCEEEEeccccc-CCCC
Confidence 66 7888887655432221 0000112346788999995444 44477789999999987764322 11 2222
Q ss_pred ce-e-EEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCC---------------CCeeEEEeCCCCCCeEE
Q 046451 219 RC-S-VLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHT---------------KGVIAMSWCPNDSSYLL 281 (719)
Q Consensus 219 ~i-~-~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~---------------~~V~~v~~sp~d~~~l~ 281 (719)
.. . .++|++++..++++....+ .|+.||.... +..+.++. .....++|++ ++++++
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~~~~---~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyv 338 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQNLS---SVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYI 338 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEETTTT---EEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEE
T ss_pred CCccccEEEeCCCCEEEEEeCCCC---EEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEE
Confidence 22 2 8999996556666665555 8999997542 34443332 3578899999 888777
Q ss_pred EEe-CCCcEEEEECCCCeEEEEecCC---------------CCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 282 TCA-KDNRTICWDTVSGEIVSELPAG---------------TNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 282 sgs-~Dg~I~iwd~~~~~~~~~l~~h---------------~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
+-. .+++|++||+.+++.. .+.++ .....+|++++++ .++++-..+++|+.++++
T Consensus 339 ad~~~~~~I~~~~~~~G~v~-~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g-~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 339 VDGFKGYCLRKLDILDGYVS-TVAGQVDVASQIDGTPLEATFNYPYDICYDGEG-GYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EETTTTCEEEEEETTTTEEE-EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS-EEEEEESTTCEEEEEEEC
T ss_pred EeCCCCCEEEEEECCCCEEE-EEeCCCCCCCcCCCChhceEeCCceEEEEcCCC-CEEEEECCCCeEEEEEeC
Confidence 777 8899999998788754 33332 2468899999997 788888888999988764
No 204
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.37 E-value=3.3e-11 Score=127.65 Aligned_cols=286 Identities=12% Similarity=0.039 Sum_probs=182.3
Q ss_pred eEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEc
Q 046451 12 SVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGL 91 (719)
Q Consensus 12 ~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs 91 (719)
.....||++.|.+.+... +..++.+.++|..+.+....+. ....-. +++++|+ ++|++++
T Consensus 37 ~~~~~pd~~~vyV~~~~~-----~~~~~~V~ViD~~t~~v~~~I~------vG~~P~-va~spDG--------~~lyVan 96 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAH-----FAAVTQQFVIDGEAGRVIGMID------GGFLPN-PVVADDG--------SFIAHAS 96 (386)
T ss_dssp CCCCCCCTTEEEEEECGG-----GCSSEEEEEEETTTTEEEEEEE------ECSSCE-EEECTTS--------SCEEEEE
T ss_pred eeccCCCCCEEEEEcCcc-----cCCCCEEEEEECCCCeEEEEEE------CCCCCc-EEECCCC--------CEEEEEc
Confidence 456789999888876521 1123456788877544333332 222224 9999998 5565554
Q ss_pred ----------CCCcEEEEcCCccccCCCCCCCCceeeeccc-------cCCEEEEEEeCCCCCEEEEEeC--CCcEEEEc
Q 046451 92 ----------VDGSIDIWNPLSLISSGETGGNPLIAHLSRH-------KGPVRGLEFNSFTPNLLASGAD--DGEICIWD 152 (719)
Q Consensus 92 ----------~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h-------~~~V~~l~fsp~~~~~lasgs~--dg~I~iwd 152 (719)
.++.|.+||. .+. +.+..+... ...-..+.|++ |+++|+++.. ++.|.++|
T Consensus 97 ~~~~r~~~G~~~~~VsviD~------~t~---~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID 166 (386)
T 3sjl_D 97 TVFSRIARGERTDYVEVFDP------VTL---LPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVD 166 (386)
T ss_dssp EEEEETTEEEEEEEEEEECT------TTC---CEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEE
T ss_pred ccccccccCCCCCEEEEEEC------CCC---eEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEE
Confidence 3678999999 444 555554321 12456799999 7888777764 68999999
Q ss_pred CCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC-CceeEEecC---CCCCce-eEEEEC-
Q 046451 153 LSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK-QKPVISFSE---SIKRRC-SVLQWN- 226 (719)
Q Consensus 153 l~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~-~~~~~~~~~---~~~~~i-~~l~~s- 226 (719)
+.+.+.+..+. +. . |..+.|.+.+.+++.+.||++.+.++.+ ++.+..... .....+ ....|.
T Consensus 167 ~~t~~vv~tI~-v~--------g--~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~ 235 (386)
T 3sjl_D 167 LEGKAFKRMLD-VP--------D--CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQ 235 (386)
T ss_dssp TTTTEEEEEEE-CC--------S--EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEET
T ss_pred CCCCcEEEEEE-CC--------C--cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEc
Confidence 99988765541 10 1 1223355556788889999999999986 554322210 111222 224554
Q ss_pred CCCCcEEEEEeCCCCCCcEEEEecCCCCC-ceEEee---------C-CCCCeeEEEeCCCCCCeEEEEeC----------
Q 046451 227 PDVATQLVVASDEDSSPALRLWDMRNTMS-PVKEFV---------G-HTKGVIAMSWCPNDSSYLLTCAK---------- 285 (719)
Q Consensus 227 p~g~~~l~~~s~d~~~~~I~lwDl~~~~~-~~~~~~---------~-h~~~V~~v~~sp~d~~~l~sgs~---------- 285 (719)
++| ++++ .+.++ .|++.|+.+... .+..+. + ....+..+++++ +++.|+....
T Consensus 236 ~dG-~~~~-vs~~g---~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~-~~~~lyV~~~~~~~~~hk~~ 309 (386)
T 3sjl_D 236 KAG-RLVW-PTYTG---KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHR-ALDRIYLLVDQRDEWRHKTA 309 (386)
T ss_dssp TTT-EEEE-EBTTS---EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEET-TTTEEEEEEEECCTTCTTSC
T ss_pred CCC-cEEE-EeCCC---EEEEEECCCCcceeecceeccccccccccccCCCcceeeECC-CCCeEEEEeccccccccCCC
Confidence 566 3334 44455 899999965421 122221 0 112444577788 6676666542
Q ss_pred CCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEE-EeCCCcEEEEeCCCCccccc
Q 046451 286 DNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISA-SSFDGKIGIYNIEGCSRYGV 345 (719)
Q Consensus 286 Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las-~s~Dg~I~iwd~~~~~~~~~ 345 (719)
.++|.++|+.+++.+.++.... .+++|.|++|+..+|++ ...++.|.++|..+++.+..
T Consensus 310 ~~~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~ 369 (386)
T 3sjl_D 310 SRFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRS 369 (386)
T ss_dssp EEEEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CCEEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEE
Confidence 2579999999999999887543 58899999999535555 55689999999999988763
No 205
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.35 E-value=1.2e-10 Score=119.16 Aligned_cols=244 Identities=9% Similarity=0.039 Sum_probs=162.4
Q ss_pred CCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcE
Q 046451 17 PDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSI 96 (719)
Q Consensus 17 pdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I 96 (719)
..+++|++++.++.|.++...++.+ +|.+... ....+.++.++++| ++|+ +.++.|
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~-~w~~~~~-------------~~~~~~~~~~~pdG--------~ilv--s~~~~V 58 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEI-VWEYPLE-------------KGWECNSVAATKAG--------EILF--SYSKGA 58 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEE-EEEEECC-------------TTCCCCEEEECTTS--------CEEE--ECBSEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeE-EEEeCCC-------------ccCCCcCeEECCCC--------CEEE--eCCCCE
Confidence 3467888888777774443323332 3443311 11457889999998 6777 347789
Q ss_pred EEEcCCccccCCCCCCCCceeeeccc-cCCEEEEEEeCCCCCEEEEEeC-CCcEEEEcCCCCCCCCccCCccCCCCCCCC
Q 046451 97 DIWNPLSLISSGETGGNPLIAHLSRH-KGPVRGLEFNSFTPNLLASGAD-DGEICIWDLSAPAEPSHFPPLRGNGSAAQG 174 (719)
Q Consensus 97 ~lwd~~~~~~~~~~~~~~~~~~l~~h-~~~V~~l~fsp~~~~~lasgs~-dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~ 174 (719)
..||. ++ +.+..+..+ ...+.++.+.+ ++++|++.+. ++.|..+|. +++.+..+. +......+..
T Consensus 59 ~~~d~-------~G---~~~W~~~~~~~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~-~~~~~~~~~~ 125 (276)
T 3no2_A 59 KMITR-------DG---RELWNIAAPAGCEMQTARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTE-FETGIERPHA 125 (276)
T ss_dssp EEECT-------TS---CEEEEEECCTTCEEEEEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEE-ECCSCSSGGG
T ss_pred EEECC-------CC---CEEEEEcCCCCccccccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEe-ccCCCCcccc
Confidence 99996 24 666777654 34788899998 8899998887 788888886 444433321 1111111112
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC
Q 046451 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM 254 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~ 254 (719)
....+++.++| ++|++...++.|.+||.+ ++.+.++. ......++.+.++| .+++++..++ .|..+|..++
T Consensus 126 ~~~~v~~~~~G-~~lv~~~~~~~v~~~d~~-G~~~w~~~--~~~~~~~~~~~~~g-~~~v~~~~~~---~v~~~d~~tG- 196 (276)
T 3no2_A 126 QFRQINKNKKG-NYLVPLFATSEVREIAPN-GQLLNSVK--LSGTPFSSAFLDNG-DCLVACGDAH---CFVQLNLESN- 196 (276)
T ss_dssp SCSCCEECTTS-CEEEEETTTTEEEEECTT-SCEEEEEE--CSSCCCEEEECTTS-CEEEECBTTS---EEEEECTTTC-
T ss_pred cccCceECCCC-CEEEEecCCCEEEEECCC-CCEEEEEE--CCCCccceeEcCCC-CEEEEeCCCC---eEEEEeCcCC-
Confidence 34456778887 588889999999999998 99998887 33556678888887 4666666665 7999998765
Q ss_pred CceEEeeCCC------CCeeEEEeCCCCCCeEEEEeCC--------CcEEEEEC-CCCeEEEEecCCC
Q 046451 255 SPVKEFVGHT------KGVIAMSWCPNDSSYLLTCAKD--------NRTICWDT-VSGEIVSELPAGT 307 (719)
Q Consensus 255 ~~~~~~~~h~------~~V~~v~~sp~d~~~l~sgs~D--------g~I~iwd~-~~~~~~~~l~~h~ 307 (719)
+.+.++..+. ..+..+...+ +++++++.... +..+++++ .+|+.+.++..+.
T Consensus 197 ~~~w~~~~~~~~~~~l~~~~~~~~~~-~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~ 263 (276)
T 3no2_A 197 RIVRRVNANDIEGVQLFFVAQLFPLQ-NGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKV 263 (276)
T ss_dssp CEEEEEEGGGSBSCCCSEEEEEEECT-TSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCTT
T ss_pred cEEEEecCCCCCCccccccccceEcC-CCCEEEEeccCccccccccCCceEEEECCCCCEEEEecCcc
Confidence 5566664332 2367888888 88877776421 23355555 4788888886544
No 206
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.35 E-value=2.7e-10 Score=119.58 Aligned_cols=229 Identities=10% Similarity=0.002 Sum_probs=149.1
Q ss_pred ceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCC
Q 046451 67 FNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDG 146 (719)
Q Consensus 67 V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg 146 (719)
..+++|++++. .++++...++.|.+||.. ++ . ...+. ....+.++.|++ +++++++. .+
T Consensus 51 ~egp~~~~~~~-------~l~~~d~~~~~i~~~d~~------~~---~-~~~~~-~~~~v~~i~~~~-dg~l~v~~-~~- 109 (326)
T 2ghs_A 51 GEGPTFDPASG-------TAWWFNILERELHELHLA------SG---R-KTVHA-LPFMGSALAKIS-DSKQLIAS-DD- 109 (326)
T ss_dssp EEEEEEETTTT-------EEEEEEGGGTEEEEEETT------TT---E-EEEEE-CSSCEEEEEEEE-TTEEEEEE-TT-
T ss_pred CcCCeEeCCCC-------EEEEEECCCCEEEEEECC------CC---c-EEEEE-CCCcceEEEEeC-CCeEEEEE-CC-
Confidence 35788998753 677888888999999983 22 2 22222 346799999998 66666654 44
Q ss_pred cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC------CCcEEEEECCCCceeEEecCCCCCce
Q 046451 147 EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY------NGTTVVWDLKKQKPVISFSESIKRRC 220 (719)
Q Consensus 147 ~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~------dg~I~iwd~~~~~~~~~~~~~~~~~i 220 (719)
.|.+||..+++..... ... .......+.+++++++|. ++++... .+.|+.+| +++... +. ......
T Consensus 110 gl~~~d~~~g~~~~~~-~~~--~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~-~~~~~~ 181 (326)
T 2ghs_A 110 GLFLRDTATGVLTLHA-ELE--SDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGKVTK-LF-ADISIP 181 (326)
T ss_dssp EEEEEETTTCCEEEEE-CSS--TTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTEEEE-EE-EEESSE
T ss_pred CEEEEECCCCcEEEEe-eCC--CCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCcEEE-ee-CCCccc
Confidence 4999998776532111 010 011123688999999984 5554432 24566666 444332 22 233456
Q ss_pred eEEEECCCCCcEEEEEeCCCCCCcEEEEecC--CC-CC----ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEE
Q 046451 221 SVLQWNPDVATQLVVASDEDSSPALRLWDMR--NT-MS----PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~--~~-~~----~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd 293 (719)
..++|+++++.++++...++ .|.+||+. ++ .. .+..+.........+++.+ +++++++...++.|.+||
T Consensus 182 ~~i~~s~dg~~lyv~~~~~~---~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~~~v~~~d 257 (326)
T 2ghs_A 182 NSICFSPDGTTGYFVDTKVN---RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEGAVDRYD 257 (326)
T ss_dssp EEEEECTTSCEEEEEETTTC---EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTTEEEEEC
T ss_pred CCeEEcCCCCEEEEEECCCC---EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCCCEEEEEC
Confidence 78999999965556555555 89999985 33 11 1122222345677899998 787777766778999999
Q ss_pred CCCCeEEEEecCCCCCeEEeEEc-CCCCCEEEEEeCC
Q 046451 294 TVSGEIVSELPAGTNWNFDIHWY-PKIPGVISASSFD 329 (719)
Q Consensus 294 ~~~~~~~~~l~~h~~~v~~l~~s-pdg~~~las~s~D 329 (719)
. +++.+..+..+...+++++|+ +++..++++...+
T Consensus 258 ~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 258 T-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp T-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred C-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 8 678878887777779999998 8874455555544
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.33 E-value=5.7e-11 Score=139.25 Aligned_cols=254 Identities=10% Similarity=0.003 Sum_probs=153.3
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEE
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVA 88 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~la 88 (719)
.+..++|||||++||.+..++. +....|++||++.++.... ..+...+..++|++| . .|+
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G-----~e~~~i~v~dl~tg~~~~~------~~~~~~~~~~~wspD-~--------~l~ 223 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGG-----SDWRTVKFVGVADGKPLAD------ELKWVKFSGLAWLGN-D--------ALL 223 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETT-----CSEEEEEEEETTTCCEEEE------EEEEEESCCCEESTT-S--------EEE
T ss_pred EEEeEEECCCCCEEEEEEcCCC-----CceEEEEEEECCCCCCCCc------cCCCceeccEEEECC-C--------EEE
Confidence 5678999999999998865421 1224679999886653221 011222468999998 4 444
Q ss_pred EEcCCC--------------cEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCC-----cEE
Q 046451 89 GGLVDG--------------SIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDG-----EIC 149 (719)
Q Consensus 89 sgs~dg--------------~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg-----~I~ 149 (719)
.++.++ .|++|++.+... +. ..+.....+...+..+.|++ |+++|+..+.++ .|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~--~~---~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~ 297 (741)
T 1yr2_A 224 YSRFAEPKEGQAFQALNYNQTVWLHRLGTPQS--AD---QPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVH 297 (741)
T ss_dssp EEECCCC--------CCCCCEEEEEETTSCGG--GC---EEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEE
T ss_pred EEEecCcccccccccCCCCCEEEEEECCCCch--hC---EEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEE
Confidence 444443 388999842110 00 22223333444688999999 788887776544 899
Q ss_pred EEcCCCC--CCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC----CCcEEEEECCCCc-eeEEecCCCCCceeE
Q 046451 150 IWDLSAP--AEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY----NGTTVVWDLKKQK-PVISFSESIKRRCSV 222 (719)
Q Consensus 150 iwdl~~~--~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~----dg~I~iwd~~~~~-~~~~~~~~~~~~i~~ 222 (719)
+||+.++ +.... +.. +...+.... +++|. .|+..+. ++.|.+||+.++. ....+...+...+..
T Consensus 298 ~~d~~~~~~~~~~~---l~~----~~~~~~~~~-~~dg~-~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~ 368 (741)
T 1yr2_A 298 VARVTNGKIGPVTA---LIP----DLKAQWDFV-DGVGD-QLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLES 368 (741)
T ss_dssp EEEEETTEECCCEE---EEC----SSSSCEEEE-EEETT-EEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEE
T ss_pred EEECCCCCCcccEE---ecC----CCCceEEEE-eccCC-EEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEE
Confidence 9999876 31222 221 122333443 37765 4444443 4569999998752 333333245556777
Q ss_pred EEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC-CCCCeeEEEeCCCCCCeEE-EEe---CCCcEEEEECCCC
Q 046451 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG-HTKGVIAMSWCPNDSSYLL-TCA---KDNRTICWDTVSG 297 (719)
Q Consensus 223 l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~-h~~~V~~v~~sp~d~~~l~-sgs---~Dg~I~iwd~~~~ 297 (719)
++|+ +..++++...++ ..+||.+......++.+.. +...|..+.+++ +++.|+ +.+ ..++|++||+.++
T Consensus 369 ~~~~--~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~-d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 369 VGIA--GNRLFASYIHDA---KSQVLAFDLDGKPAGAVSLPGIGSASGLSGRP-GDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp EEEE--BTEEEEEEEETT---EEEEEEEETTSCEEEECBCSSSCEEEEEECCB-TCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred EEEE--CCEEEEEEEECC---EEEEEEEeCCCCceeeccCCCCeEEEEeecCC-CCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 8887 336777777776 5666654322344555554 356788999999 666444 333 3478999999888
Q ss_pred eEEEEec
Q 046451 298 EIVSELP 304 (719)
Q Consensus 298 ~~~~~l~ 304 (719)
+. ..+.
T Consensus 443 ~~-~~l~ 448 (741)
T 1yr2_A 443 KT-TPWE 448 (741)
T ss_dssp EE-EECS
T ss_pred cE-EEEe
Confidence 73 3443
No 208
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.33 E-value=9e-11 Score=136.41 Aligned_cols=253 Identities=12% Similarity=0.103 Sum_probs=160.5
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEE-----cCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCC
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGG-----LVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPN 137 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasg-----s~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~ 137 (719)
+...+..++||||| ++||.+ +....|++||+ .++ +.+.. ..+......++|+ |++
T Consensus 127 ~~~~l~~~~~SpDg--------~~lAy~~~~~G~~~~~i~v~dl------~tg---~~~~~-~~~~~k~~~~~Ws--Dg~ 186 (693)
T 3iuj_A 127 GTTALDQLSFSRDG--------RILAYSLSLAGSDWREIHLMDV------ESK---QPLET-PLKDVKFSGISWL--GNE 186 (693)
T ss_dssp SCCEEEEEEECTTS--------SEEEEEEECSSCCEEEEEEEET------TTC---SEEEE-EEEEEESCCCEEE--TTT
T ss_pred CcEEEEEEEECCCC--------CEEEEEEecCCCceEEEEEEEC------CCC---CCCcc-ccCCceeccEEEe--CCC
Confidence 44578889999998 566632 22357999999 344 33222 1111113578898 567
Q ss_pred EEEEEeCCC-------------cEEEEcCCCCCCCCccCCccCCCCC-CCCCeEEEEecCCCCcEEEEEeC---CCcEEE
Q 046451 138 LLASGADDG-------------EICIWDLSAPAEPSHFPPLRGNGSA-AQGEISFVSWNSKVQHILASTSY---NGTTVV 200 (719)
Q Consensus 138 ~lasgs~dg-------------~I~iwdl~~~~~~~~~~~l~~~~~~-h~~~I~~l~~sp~g~~~l~s~s~---dg~I~i 200 (719)
.|+.++.+. .|++|++.+....... + ..... +...+..+.|+++|+.++++... +..|++
T Consensus 187 ~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~--v-~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~ 263 (693)
T 3iuj_A 187 GFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRL--V-FGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYV 263 (693)
T ss_dssp EEEEEESSCCC-------CCCCEEEEEETTSCGGGCEE--E-ESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEE
T ss_pred EEEEEEecCcccccccccCCCcEEEEEECCCCcccceE--E-EecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEE
Confidence 777777664 3999999876532211 1 11122 33457889999998755555543 258999
Q ss_pred EECCCCc-eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC-ceEEeeCCCCCeeEEEeCCCCCC
Q 046451 201 WDLKKQK-PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS-PVKEFVGHTKGVIAMSWCPNDSS 278 (719)
Q Consensus 201 wd~~~~~-~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~-~~~~~~~h~~~V~~v~~sp~d~~ 278 (719)
||+.++. ....+. .+....... |+++|+.+++.+..+...+.|.++|+.+... ....+..|...+. .|++ +++
T Consensus 264 ~d~~~~~~~~~~l~-~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~-~g~ 338 (693)
T 3iuj_A 264 KDLSQENAPLLTVQ-GDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHS-GSG 338 (693)
T ss_dssp EETTSTTCCCEEEE-CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEE-ETT
T ss_pred EECCCCCCceEEEe-CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEE-ECC
Confidence 9998764 344444 344444444 6677777777776654445899999976532 2356666766665 8888 667
Q ss_pred eEEEEeC-CC--cEEEEECCCCeEEEEec-CCCCCeEEeEEcCCCCCEEEEEeCC---CcEEEEeCCCCcccc
Q 046451 279 YLLTCAK-DN--RTICWDTVSGEIVSELP-AGTNWNFDIHWYPKIPGVISASSFD---GKIGIYNIEGCSRYG 344 (719)
Q Consensus 279 ~l~sgs~-Dg--~I~iwd~~~~~~~~~l~-~h~~~v~~l~~spdg~~~las~s~D---g~I~iwd~~~~~~~~ 344 (719)
+|+.... ++ .|++||+..+. ...+. .+...+..+.+++++..++++.+.. +.|..||+.+++...
T Consensus 339 ~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~ 410 (693)
T 3iuj_A 339 YLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISL 410 (693)
T ss_dssp EEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEE
T ss_pred EEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEE
Confidence 6665554 44 68899987544 44443 2445678888998886666665532 789999998876543
No 209
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.31 E-value=2.5e-10 Score=118.34 Aligned_cols=243 Identities=10% Similarity=0.079 Sum_probs=152.4
Q ss_pred cCccceEEEcCCCCeEEE-------eeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCC-CCC
Q 046451 7 INRSASVAFAPDAPYMAA-------GTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKN-GSG 78 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Lat-------gs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~-g~~ 78 (719)
.....+++|+++|+++++ +..++.| .+||...+... .+.......+...+.+++++++ +
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i----------~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g-- 83 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEI----------LRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDAN-- 83 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEE----------EEECTTTCCEE-EEECCEETTEECCEEEEEECSSSS--
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEE----------EEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCC--
Confidence 355679999999988887 5555555 55554322211 0100000113356889999998 5
Q ss_pred CCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceee-ec----cccCCEEEEEEeCCCCCEEEEEeCC--------
Q 046451 79 SEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH-LS----RHKGPVRGLEFNSFTPNLLASGADD-------- 145 (719)
Q Consensus 79 ~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~-l~----~h~~~V~~l~fsp~~~~~lasgs~d-------- 145 (719)
+++++.. ++.|.+||.+ + +.... .. .....+.++++++ +++++++...+
T Consensus 84 ------~l~v~~~-~~~l~~~d~~-------g---~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~ 145 (314)
T 1pjx_A 84 ------QLFVADM-RLGLLVVQTD-------G---TFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYT 145 (314)
T ss_dssp ------EEEEEET-TTEEEEEETT-------S---CEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCC
T ss_pred ------cEEEEEC-CCCEEEEeCC-------C---CEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCccccccccc
Confidence 4555544 4478889873 2 22211 11 1224578999998 67777776654
Q ss_pred -------CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEec----CCCCcEEEEEeCCCcEEEEECC-CCce-----
Q 046451 146 -------GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWN----SKVQHILASTSYNGTTVVWDLK-KQKP----- 208 (719)
Q Consensus 146 -------g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~s----p~g~~~l~s~s~dg~I~iwd~~-~~~~----- 208 (719)
+.|..||.. ++. .. +.. +......++|+ +++..++++...++.|.+||++ +++.
T Consensus 146 ~~~~~~~~~l~~~~~~-g~~-~~---~~~----~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~ 216 (314)
T 1pjx_A 146 RSMQEKFGSIYCFTTD-GQM-IQ---VDT----AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKV 216 (314)
T ss_dssp BTTSSSCEEEEEECTT-SCE-EE---EEE----EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEE
T ss_pred ccccCCCCeEEEECCC-CCE-EE---ecc----CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceE
Confidence 567777764 322 11 111 12246789999 8875455555678899999986 4432
Q ss_pred eEEecCCCC-CceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeE-EEEeCC
Q 046451 209 VISFSESIK-RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYL-LTCAKD 286 (719)
Q Consensus 209 ~~~~~~~~~-~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l-~sgs~D 286 (719)
...+. .+. .....++++++| .++++...++ .|.+||.+++ +.+..+..+...+.+++|++ +++.| ++...+
T Consensus 217 ~~~~~-~~~~~~p~~i~~d~~G-~l~v~~~~~~---~i~~~d~~~g-~~~~~~~~~~~~~~~i~~~~-dg~~l~v~~~~~ 289 (314)
T 1pjx_A 217 WGHIP-GTHEGGADGMDFDEDN-NLLVANWGSS---HIEVFGPDGG-QPKMRIRCPFEKPSNLHFKP-QTKTIFVTEHEN 289 (314)
T ss_dssp EEECC-CCSSCEEEEEEEBTTC-CEEEEEETTT---EEEEECTTCB-SCSEEEECSSSCEEEEEECT-TSSEEEEEETTT
T ss_pred EEECC-CCCCCCCCceEECCCC-CEEEEEcCCC---EEEEEcCCCC-cEeEEEeCCCCCceeEEECC-CCCEEEEEeCCC
Confidence 22222 222 567889999998 4666665665 7999998744 44556666767899999998 77744 455567
Q ss_pred CcEEEEECCC
Q 046451 287 NRTICWDTVS 296 (719)
Q Consensus 287 g~I~iwd~~~ 296 (719)
+.|..||+..
T Consensus 290 ~~l~~~~~~~ 299 (314)
T 1pjx_A 290 NAVWKFEWQR 299 (314)
T ss_dssp TEEEEEECSS
T ss_pred CeEEEEeCCC
Confidence 8999999864
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.31 E-value=8.3e-11 Score=126.82 Aligned_cols=281 Identities=9% Similarity=-0.010 Sum_probs=180.2
Q ss_pred CCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEc-----
Q 046451 17 PDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGL----- 91 (719)
Q Consensus 17 pdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs----- 91 (719)
+|++++.+...... ...+.|.++|..+.+....+.+ ...- .+++++|+ ++|+++.
T Consensus 82 ~~~~~vyV~n~~~~-----~~~~~VsVID~~t~~vv~~I~v------G~~P-gia~SpDg--------k~lyVan~~~~~ 141 (426)
T 3c75_H 82 PDARRVYIQDPAHF-----AAITQQFVIDGSTGRILGMTDG------GFLP-HPVAAEDG--------SFFAQASTVFER 141 (426)
T ss_dssp CCTTEEEEEECTTT-----CSSEEEEEEETTTTEEEEEEEE------CSSC-EEEECTTS--------SCEEEEEEEEEE
T ss_pred CCCCEEEEECCCcC-----CCCCeEEEEECCCCEEEEEEEC------CCCC-ceEECCCC--------CEEEEEeccccc
Confidence 56776666543210 0015678888876554444332 2223 89999998 5555554
Q ss_pred -----CCCcEEEEcCCccccCCCCCCCCceeeeccc-------cCCEEEEEEeCCCCCEEEEEeC--CCcEEEEcCCCCC
Q 046451 92 -----VDGSIDIWNPLSLISSGETGGNPLIAHLSRH-------KGPVRGLEFNSFTPNLLASGAD--DGEICIWDLSAPA 157 (719)
Q Consensus 92 -----~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h-------~~~V~~l~fsp~~~~~lasgs~--dg~I~iwdl~~~~ 157 (719)
.++.|.++|. .+. +.+..+..- ......+.|++ |+++|+++.. ++.|.++|+.+.+
T Consensus 142 ~~~G~~~~~VsviD~------~t~---~vv~~I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~k 211 (426)
T 3c75_H 142 IARGKRTDYVEVFDP------VTF---LPIADIELPDAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKT 211 (426)
T ss_dssp TTEEEEEEEEEEECT------TTC---CEEEEEEETTCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTE
T ss_pred cccCCCCCEEEEEEC------CCC---cEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCe
Confidence 4678999998 444 555544321 13356789999 7888888764 5789999999987
Q ss_pred CCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEE----ecCCCCCceeEEEECCCCCcEE
Q 046451 158 EPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS----FSESIKRRCSVLQWNPDVATQL 233 (719)
Q Consensus 158 ~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~----~~~~~~~~i~~l~~sp~g~~~l 233 (719)
.+..+. . .. +....+++.+.+++.+.||++.+.++.+++.... +..........+.|.+++..++
T Consensus 212 vv~~I~---v------~g--~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~ 280 (426)
T 3c75_H 212 FDRMLD---V------PD--CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLV 280 (426)
T ss_dssp EEEEEE---C------CS--EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEE
T ss_pred EEEEEE---c------CC--ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEE
Confidence 665532 1 01 1234455556778888899999999966655432 2211111223457899986655
Q ss_pred EEEeCCCCCCcEEEEecCCCCCc-eEEeeC----------CCCCeeEEEeCCCCCCeEEEEeC----------CCcEEEE
Q 046451 234 VVASDEDSSPALRLWDMRNTMSP-VKEFVG----------HTKGVIAMSWCPNDSSYLLTCAK----------DNRTICW 292 (719)
Q Consensus 234 ~~~s~d~~~~~I~lwDl~~~~~~-~~~~~~----------h~~~V~~v~~sp~d~~~l~sgs~----------Dg~I~iw 292 (719)
++ ...+ .|.+.|+...... +..+.. .......++|++ +++.+++... ++.|.++
T Consensus 281 ~~-s~~g---~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~-dg~rlyVa~~~~~~gthk~~s~~VsVI 355 (426)
T 3c75_H 281 WP-TYTG---KIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHR-QSDRIYLLVDQRDEWKHKAASRFVVVL 355 (426)
T ss_dssp EE-BTTS---EEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEG-GGTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred EE-eCCC---cEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcC-CCCEEEEEecccccccccCCCCEEEEE
Confidence 55 4444 8999998643210 111110 011223478899 6666665532 3579999
Q ss_pred ECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEe-CCCcEEEEeCCCCcccc
Q 046451 293 DTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASS-FDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 293 d~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s-~Dg~I~iwd~~~~~~~~ 344 (719)
|+.+++.+.++.... ..+++.|++|++.++++.. .++.|.|+|+.+.+.+.
T Consensus 356 D~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 356 NAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELR 407 (426)
T ss_dssp ETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred ECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEE
Confidence 999999999987543 4889999999952666666 59999999999998875
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.30 E-value=1.4e-09 Score=116.08 Aligned_cols=263 Identities=11% Similarity=-0.016 Sum_probs=157.4
Q ss_pred eEEEcCCCCeEEEeecc-ceeecccCCCceEEEEEeeccCCcccceee--cccCCCCCceeeeecCCCCCCCCCccceEE
Q 046451 12 SVAFAPDAPYMAAGTMA-GAVDLSFSSSANLEIFKLDFQSEDRDLLLV--GESPSSERFNRLAWGKNGSGSEDFSLGLVA 88 (719)
Q Consensus 12 ~vafSpdg~~Latgs~d-G~v~v~~s~~~~i~iwd~~~~~~~~~~~~~--~~~~~~~~V~~l~~sp~g~~~~~~~~~~la 88 (719)
.++|||||++|.++... +.+ ..-..++.+.+||..+.+....+.+. ....+...-..++|++|| ++|+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~-~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG--------~~l~ 140 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRI-AKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNN--------ADLL 140 (373)
T ss_pred CeEECCCCCEEEEEecccccc-ccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCC--------CEEE
Confidence 89999999999888531 000 00012455688888754443333221 000011234589999999 6777
Q ss_pred EEcC--CCcEEEEcCCccccCCCCCCCCceee-eccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 89 GGLV--DGSIDIWNPLSLISSGETGGNPLIAH-LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 89 sgs~--dg~I~lwd~~~~~~~~~~~~~~~~~~-l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+++. ++.|.++| .+. +.+.. +.. .+ |+.+.+.+.+.+++.+.||++.++|. +++...... .
T Consensus 141 v~n~~~~~~v~viD-~t~---------~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~-~ 204 (373)
T 2mad_H 141 FFQFAAGPAVGLVV-QGG---------SSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGL-V 204 (373)
T ss_pred EEecCCCCeEEEEE-CCC---------CEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEe-c
Confidence 7653 57899999 642 33333 321 11 24455645567788889999999999 665442210 0
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc--eeEEecCC---------CCCceeEEEECCCCCcEEE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK--PVISFSES---------IKRRCSVLQWNPDVATQLV 234 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~~---------~~~~i~~l~~sp~g~~~l~ 234 (719)
...............+.+++..++++ +.++.+.+.|+.+.. .+..+... .......+.++++++++++
T Consensus 205 ~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV 283 (373)
T 2mad_H 205 GAMLTAAQNLLTQPAQANKSGRIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYL 283 (373)
T ss_pred cccccCCcceeecceeEecCCEEEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEE
Confidence 00001111112234556665444444 467899999997653 22222200 1122344789999876666
Q ss_pred EEeCC------CCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCC-eEEEEe-CCCcEEEEECCCCeEEEEe
Q 046451 235 VASDE------DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS-YLLTCA-KDNRTICWDTVSGEIVSEL 303 (719)
Q Consensus 235 ~~s~d------~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~-~l~sgs-~Dg~I~iwd~~~~~~~~~l 303 (719)
+.... ...+.|.++|+.+. +.+.++.. .....++.|++ |++ +|+++. .++.|.+||+.+++.+..+
T Consensus 284 ~~~~~~~~~~~~~~~~V~VID~~t~-~vv~~i~~-g~~p~~i~~s~-Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 284 LTSEQSAWKLHAAAKEVTSVTGLVG-QTSSQISL-GHDVDAISVAQ-DGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EeccCCcccccCCCCeEEEEECCCC-EEEEEEEC-CCCcCeEEECC-CCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 54421 01237999999765 55566643 33678999999 777 777777 5899999999999998884
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.29 E-value=5e-10 Score=118.61 Aligned_cols=277 Identities=10% Similarity=0.072 Sum_probs=165.3
Q ss_pred eEEEcCCCCeEEEeecc-ceeecccCCCceEEEEEeeccCCcccceeec--ccCCCCCceeeeecCCCCCCCCCccceEE
Q 046451 12 SVAFAPDAPYMAAGTMA-GAVDLSFSSSANLEIFKLDFQSEDRDLLLVG--ESPSSERFNRLAWGKNGSGSEDFSLGLVA 88 (719)
Q Consensus 12 ~vafSpdg~~Latgs~d-G~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~~~V~~l~~sp~g~~~~~~~~~~la 88 (719)
.+++||||++|.+++.- ... .+-..++.|.+||..+.+...++.+-. .......-..++|++|| ++|+
T Consensus 82 ~va~spDG~~lyVan~~~~r~-~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDG--------k~ly 152 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRI-ARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDG--------KTLL 152 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEET-TEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTS--------SEEE
T ss_pred cEEECCCCCEEEEEccccccc-ccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCC--------CEEE
Confidence 49999999988777520 000 000013456889888665444443211 01112356789999998 5666
Q ss_pred EEcC--CCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCcc
Q 046451 89 GGLV--DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLR 166 (719)
Q Consensus 89 sgs~--dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~ 166 (719)
++.. ++.|.++|+ .+. +.+.++... + . ...+ |.+.+.+++.+.||++.+.++.+...+... ..
T Consensus 153 Van~~~~~~VsVID~------~t~---~vv~tI~v~-g-~-~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~--~~ 217 (386)
T 3sjl_D 153 FYQFSPAPAVGVVDL------EGK---AFKRMLDVP-D-C-YHIF-PTAPDTFFMHCRDGSLAKVAFGTEGTPEIT--HT 217 (386)
T ss_dssp EEECSSSCEEEEEET------TTT---EEEEEEECC-S-E-EEEE-EEETTEEEEEETTSCEEEEECCSSSCCEEE--EC
T ss_pred EEEcCCCCeEEEEEC------CCC---cEEEEEECC-C-c-ceee-cCCCceeEEECCCCCEEEEECCCCCeEEEe--ec
Confidence 6653 689999999 444 555555421 1 1 2223 435677888889999999998763322110 00
Q ss_pred CCCCCCCCCe-EEEEec-CCCCcEEEEEeCCCcEEEEECCCCc--eeEEecC---------CCCCceeEEEECCCCCcEE
Q 046451 167 GNGSAAQGEI-SFVSWN-SKVQHILASTSYNGTTVVWDLKKQK--PVISFSE---------SIKRRCSVLQWNPDVATQL 233 (719)
Q Consensus 167 ~~~~~h~~~I-~~l~~s-p~g~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~---------~~~~~i~~l~~sp~g~~~l 233 (719)
.........+ ....|. ++| ++++ .+.+|+|++.|+.+.. .+..+.. -.......+++++++++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~dG-~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~ly 295 (386)
T 3sjl_D 218 EVFHPEDEFLINHPAYSQKAG-RLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIY 295 (386)
T ss_dssp CCCSCTTSCBCSCCEEETTTT-EEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEE
T ss_pred ceeccccccccccceeEcCCC-cEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEE
Confidence 0000011122 224564 454 3444 5668999999997654 2222210 0122344578899987766
Q ss_pred EEEeCCC------CCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCC-eEEEE-eCCCcEEEEECCCCeEEEEecC
Q 046451 234 VVASDED------SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS-YLLTC-AKDNRTICWDTVSGEIVSELPA 305 (719)
Q Consensus 234 ~~~s~d~------~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~-~l~sg-s~Dg~I~iwd~~~~~~~~~l~~ 305 (719)
++...++ ....|.++|+++. +.++.+..- ..+.+|.|++ |++ +|+++ ..++.|.++|..+++.+.++..
T Consensus 296 V~~~~~~~~~hk~~~~~V~viD~~t~-kv~~~i~vg-~~~~~lavs~-D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~ 372 (386)
T 3sjl_D 296 LLVDQRDEWRHKTASRFVVVLDAKTG-ERLAKFEMG-HEIDSINVSQ-DEKPLLYALSTGDKTLYIHDAESGEELRSVNQ 372 (386)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTC-CEEEEEEEE-EEECEEEECS-SSSCEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred EEeccccccccCCCCCEEEEEECCCC-eEEEEEECC-CCcceEEECC-CCCeEEEEEcCCCCeEEEEECCCCcEEEEecC
Confidence 6544210 1137999999875 555555422 3678999999 665 66665 4589999999999999999875
Q ss_pred CCCCeEEeEEcCC
Q 046451 306 GTNWNFDIHWYPK 318 (719)
Q Consensus 306 h~~~v~~l~~spd 318 (719)
... -..|.+++|
T Consensus 373 ~~~-p~~l~~s~d 384 (386)
T 3sjl_D 373 LGH-GPQVITTAD 384 (386)
T ss_dssp CCS-SCCEEEECC
T ss_pred CCC-CceeEECCc
Confidence 433 445666655
No 213
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.25 E-value=1.2e-10 Score=123.73 Aligned_cols=176 Identities=10% Similarity=0.039 Sum_probs=128.7
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCC-----cccceeecccCCCCCceeeeecCCCCCCCCC
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSE-----DRDLLLVGESPSSERFNRLAWGKNGSGSEDF 82 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~ 82 (719)
..++.++++++..+|++|+.++. .+|+++.... ...+.......+.. |+.|+| ++
T Consensus 38 ~~~nlLais~~~gll~a~~~~~l-----------~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~------ 97 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSKA-----------VVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HG------ 97 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTEE-----------EEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ET------
T ss_pred ccccEEEEcCCCCEEEEeCCCEE-----------EEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CC------
Confidence 46899999999999999987764 4687653320 00011111233556 999999 65
Q ss_pred ccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCcc
Q 046451 83 SLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF 162 (719)
Q Consensus 83 ~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~ 162 (719)
.+|+++ .++.|++||+.+. ........|...+.++.+.+. .+++++.||.|.+||+.+.....
T Consensus 98 --~~L~v~-~~~~l~v~dv~sl---------~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~~-- 160 (388)
T 1xip_A 98 --DQVLVS-TRNALYSLDLEEL---------SEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQ-- 160 (388)
T ss_dssp --TEEEEE-ESSEEEEEESSST---------TCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEEE--
T ss_pred --CEEEEE-cCCcEEEEEchhh---------hccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCcccc--
Confidence 688888 8899999999532 333445567778888888762 38889999999999998765421
Q ss_pred CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce--eEEecC--------CCCCceeEEEECCCCCcE
Q 046451 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP--VISFSE--------SIKRRCSVLQWNPDVATQ 232 (719)
Q Consensus 163 ~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~--~~~~~~--------~~~~~i~~l~~sp~g~~~ 232 (719)
+...|+|++|+++| ++.|..||++++|+...++. ..++.. .+...|.+|.|.+++..+
T Consensus 161 ---------~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~fl 228 (388)
T 1xip_A 161 ---------LAQNVTSFDVTNSQ---LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFL 228 (388)
T ss_dssp ---------EEESEEEEEECSSE---EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEE
T ss_pred ---------ccCCceEEEEcCCc---eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEE
Confidence 23489999999997 67799999999999987775 555521 267889999999987433
No 214
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.24 E-value=3.5e-10 Score=131.38 Aligned_cols=251 Identities=12% Similarity=0.099 Sum_probs=153.6
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceE
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLV 87 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~l 87 (719)
..+..++|||||++||.+...+. +....|++||+++++.... .+ .......++|+ |+ +.|
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G-----~~~~~i~v~dl~tg~~~~~-~~-----~~~k~~~~~Ws-Dg--------~~l 188 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAG-----SDWREIHLMDVESKQPLET-PL-----KDVKFSGISWL-GN--------EGF 188 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSS-----CCEEEEEEEETTTCSEEEE-EE-----EEEESCCCEEE-TT--------TEE
T ss_pred EEEEEEEECCCCCEEEEEEecCC-----CceEEEEEEECCCCCCCcc-cc-----CCceeccEEEe-CC--------CEE
Confidence 35778899999999997654321 2335779999987653211 00 11124678999 98 566
Q ss_pred EEEcCCC-------------cEEEEcCCccccCCCCCCCCceeeecc-ccCCEEEEEEeCCCCCEEEEEeC----CCcEE
Q 046451 88 AGGLVDG-------------SIDIWNPLSLISSGETGGNPLIAHLSR-HKGPVRGLEFNSFTPNLLASGAD----DGEIC 149 (719)
Q Consensus 88 asgs~dg-------------~I~lwd~~~~~~~~~~~~~~~~~~l~~-h~~~V~~l~fsp~~~~~lasgs~----dg~I~ 149 (719)
+.++.+. .|++|++.+... +. ..+..... |...+..+.|++ |+++|+.... +..|+
T Consensus 189 ~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~--~~---~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~ 262 (693)
T 3iuj_A 189 FYSSYDKPDGSELSARTDQHKVYFHRLGTAQE--DD---RLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLY 262 (693)
T ss_dssp EEEESSCCC-------CCCCEEEEEETTSCGG--GC---EEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEE
T ss_pred EEEEecCcccccccccCCCcEEEEEECCCCcc--cc---eEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEE
Confidence 6666553 399999843210 11 23333344 555678899999 6776654332 35899
Q ss_pred EEcCCCCC-CCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC---CcEEEEECCCCce--eEEecCCCCCceeEE
Q 046451 150 IWDLSAPA-EPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN---GTTVVWDLKKQKP--VISFSESIKRRCSVL 223 (719)
Q Consensus 150 iwdl~~~~-~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d---g~I~iwd~~~~~~--~~~~~~~~~~~i~~l 223 (719)
++|+.+.. .... +.. +....... |+++|+.+++....+ +.|.++|+.++.. ...+. .+...+.
T Consensus 263 ~~d~~~~~~~~~~---l~~----~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~-- 331 (693)
T 3iuj_A 263 VKDLSQENAPLLT---VQG----DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI-PERQQVL-- 331 (693)
T ss_dssp EEETTSTTCCCEE---EEC----SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE-CCCSSCE--
T ss_pred EEECCCCCCceEE---EeC----CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe-cCCCCEE--
Confidence 99998764 2222 221 22233343 566666666666554 6899999988654 23444 3444444
Q ss_pred EECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEee-CCCCCeeEEEeCCCCCCeEEEEeCC----CcEEEEECCCCe
Q 046451 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKD----NRTICWDTVSGE 298 (719)
Q Consensus 224 ~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~-~h~~~V~~v~~sp~d~~~l~sgs~D----g~I~iwd~~~~~ 298 (719)
.|+++++.++++...++ ...|++||+... ..+.+. .....+..+.+++ +++.|+....+ +.|..||+.+++
T Consensus 332 ~~s~~g~~lv~~~~~~g-~~~l~~~d~~g~--~~~~l~~p~~~~~~~~~~~~-d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 332 TVHSGSGYLFAEYMVDA-TARVEQFDYEGK--RVREVALPGLGSVSGFNGKH-DDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEEETTEEEEEEEETT-EEEEEEECTTSC--EEEEECCSSSSEEEECCCCT-TCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEEEECCEEEEEEEECC-eeEEEEEECCCC--eeEEeecCCCceEEeeecCC-CCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 88888866555555553 236889998642 334443 2345677788888 55555544434 789999998776
Q ss_pred E
Q 046451 299 I 299 (719)
Q Consensus 299 ~ 299 (719)
.
T Consensus 408 ~ 408 (693)
T 3iuj_A 408 I 408 (693)
T ss_dssp E
T ss_pred E
Confidence 4
No 215
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.22 E-value=3.2e-10 Score=119.83 Aligned_cols=246 Identities=7% Similarity=-0.037 Sum_probs=154.8
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEc--CCCcEEEEcCCccccCCCCCCCCce------eeeccccCCEEEEEEeCCCC
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGL--VDGSIDIWNPLSLISSGETGGNPLI------AHLSRHKGPVRGLEFNSFTP 136 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs--~dg~I~lwd~~~~~~~~~~~~~~~~------~~l~~h~~~V~~l~fsp~~~ 136 (719)
.....|+++++| +++++.. .++.++||.+.+ + +.. .....|...+.+++|++ ++
T Consensus 17 ~~p~~va~~~~g--------~~~v~~~~~~~~~~~l~~~~~------g---~~~~~p~~~~~~~~~~~~p~gv~~d~-~g 78 (343)
T 2qe8_A 17 LAPGNITLTPDG--------RLFLSLHQFYQPEMQVAELTQ------D---GLIPFPPQSGNAIITFDTVLGIKSDG-NG 78 (343)
T ss_dssp SCEEEEEECTTS--------CEEEEECGGGCCSCSEEEEET------T---EEEESCCCCSSCCCCCSCEEEEEECS-SS
T ss_pred CCcceEEECCCC--------CEEEEeCCCCCCceEEEEECC------C---CeecCCCcccCcccceeEeeEEEEcC-CC
Confidence 567899999987 6777753 234366666521 1 111 11223567899999998 56
Q ss_pred CEEEEEeC-----CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe---CCCcEEEEECCCCce
Q 046451 137 NLLASGAD-----DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS---YNGTTVVWDLKKQKP 208 (719)
Q Consensus 137 ~~lasgs~-----dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s---~dg~I~iwd~~~~~~ 208 (719)
+++++-.. ++.|.+||+.+++....+. +......+...+..+++++++..++++.. .++.|.+||+.+++.
T Consensus 79 ~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~-~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~ 157 (343)
T 2qe8_A 79 IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIY-LPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA 157 (343)
T ss_dssp EEEEEECHHHHTSCCEEEEEETTTTEEEEEEE-CCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE
T ss_pred cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEE-CChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE
Confidence 65555433 5789999998876444331 11111123346789999976555566655 678999999988776
Q ss_pred eEEecCCC-----------------------------CCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecC---CCC--
Q 046451 209 VISFSESI-----------------------------KRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR---NTM-- 254 (719)
Q Consensus 209 ~~~~~~~~-----------------------------~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~---~~~-- 254 (719)
...+. .| ...+..|+|+++|+. |+++...+. .|+.+|.. ...
T Consensus 158 ~r~~~-~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~-ly~~~~~~~--~l~~~~~~~~~~~~~~ 233 (343)
T 2qe8_A 158 ARVLQ-GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW-LYLSPMHST--SMYRIKSADLSNLQLT 233 (343)
T ss_dssp EEECT-TCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE-EEEEESSCS--EEEEEEHHHHTCTTCC
T ss_pred EEEec-CCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCE-EEEEeCCCC--eEEEEEHHHhcCCCCC
Confidence 55443 11 123578999999864 444444431 56555532 110
Q ss_pred --Cce--EEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC-CCCCeEEeEEcCCCCCEEEEEeCC
Q 046451 255 --SPV--KEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA-GTNWNFDIHWYPKIPGVISASSFD 329 (719)
Q Consensus 255 --~~~--~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~-h~~~v~~l~~spdg~~~las~s~D 329 (719)
+.. ....++......+++++ ++.++++...++.|.+||..+++....... +.....+++|.+++ .++++.+..
T Consensus 234 ~~~~~~~~~~~g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g-~l~v~~~~~ 311 (343)
T 2qe8_A 234 DAELGSKIERYSEKPICDGISIDK-DHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDG-YLYFDCNQL 311 (343)
T ss_dssp HHHHHTTCEEEEECCSCSCEEECT-TCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTS-CEEEEECCG
T ss_pred hhhhhcceEecccCCCCceEEECC-CCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCC-cEEEEeCcc
Confidence 000 01223444567799999 889888888999999999966765433332 24568999999987 677777655
Q ss_pred CcEEEE
Q 046451 330 GKIGIY 335 (719)
Q Consensus 330 g~I~iw 335 (719)
+++.+|
T Consensus 312 ~~~~~f 317 (343)
T 2qe8_A 312 HHSAPL 317 (343)
T ss_dssp GGSGGG
T ss_pred cccccc
Confidence 554443
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.22 E-value=2.2e-09 Score=116.31 Aligned_cols=241 Identities=10% Similarity=0.038 Sum_probs=152.9
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
.+....|+|+++|+++++...++. |++||.+.+.... +.. ...... ++|++++ +.
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~----------I~~id~~~g~~~~---~~~---~~~~~~-ia~~~~g--------~~ 184 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPR----------VRLISVDDNKVTT---VHP---GFKGGK-PAVTKDK--------QR 184 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTE----------EEEEETTTTEEEE---EEE---TCCBCB-CEECTTS--------SE
T ss_pred cCCceEEEEeCCCCEEEEecCCCc----------EEEEECCCCEEEE---eec---cCCCCc-eeEecCC--------Cc
Confidence 467789999999997777654444 4677765332211 111 122233 9999998 67
Q ss_pred EEEEcCCC--cEEEEcCCccccCCCCCCCCceeee----ccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCC
Q 046451 87 VAGGLVDG--SIDIWNPLSLISSGETGGNPLIAHL----SRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 87 lasgs~dg--~I~lwd~~~~~~~~~~~~~~~~~~l----~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~ 160 (719)
|+++..++ .|.+|+.. .+ .....+ ......+.++++++.+ ..|+.+..++.|+.||..+....
T Consensus 185 l~~~d~~~~~~I~~~d~~------~~---~~~~~~g~~~~~~~~~p~~iav~p~~-g~lyv~d~~~~I~~~d~~~~~~~- 253 (409)
T 3hrp_A 185 VYSIGWEGTHTVYVYMKA------SG---WAPTRIGQLGSTFSGKIGAVALDETE-EWLYFVDSNKNFGRFNVKTQEVT- 253 (409)
T ss_dssp EEEEBSSTTCEEEEEEGG------GT---TCEEEEEECCTTSCSCCCBCEECTTS-SEEEEECTTCEEEEEETTTCCEE-
T ss_pred EEEEecCCCceEEEEEcC------CC---ceeEEeeeccchhcCCcEEEEEeCCC-CeEEEEECCCcEEEEECCCCCEE-
Confidence 77777765 78888863 22 222222 2245667899999844 45555777899999999866421
Q ss_pred ccCCccCCCCCCCCCe--EEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCC--------------CCceeEEE
Q 046451 161 HFPPLRGNGSAAQGEI--SFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESI--------------KRRCSVLQ 224 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I--~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~--------------~~~i~~l~ 224 (719)
.+..... ......- ..++|++++..++++...++.|+.||.... +..+.... -.....++
T Consensus 254 ~~~~~~~--~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia 329 (409)
T 3hrp_A 254 LIKQLEL--SGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMT 329 (409)
T ss_dssp EEEECCC--CSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEE
T ss_pred EEecccc--cCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEE
Confidence 1100000 1111122 389999965567777778899999997754 22222111 23478899
Q ss_pred ECCCCCcEEEEEe-CCCCCCcEEEEecCCCCCceEEeeCC---------------CCCeeEEEeCCCCCCeEEEEeCCCc
Q 046451 225 WNPDVATQLVVAS-DEDSSPALRLWDMRNTMSPVKEFVGH---------------TKGVIAMSWCPNDSSYLLTCAKDNR 288 (719)
Q Consensus 225 ~sp~g~~~l~~~s-~d~~~~~I~lwDl~~~~~~~~~~~~h---------------~~~V~~v~~sp~d~~~l~sgs~Dg~ 288 (719)
|+++|. ++++-. .+. .|+.||+.++ .+.++.++ -.....|++++ ++.++++-..+++
T Consensus 330 ~d~dG~-lyvad~~~~~---~I~~~~~~~G--~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~-~g~lyVad~~n~~ 402 (409)
T 3hrp_A 330 VDEDGN-FYIVDGFKGY---CLRKLDILDG--YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDG-EGGYWIAEAWGKA 402 (409)
T ss_dssp ECTTCC-EEEEETTTTC---EEEEEETTTT--EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECS-SSEEEEEESTTCE
T ss_pred EeCCCC-EEEEeCCCCC---EEEEEECCCC--EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcC-CCCEEEEECCCCe
Confidence 999985 666655 555 8999997554 24445444 24578899999 7777777778888
Q ss_pred EEEEEC
Q 046451 289 TICWDT 294 (719)
Q Consensus 289 I~iwd~ 294 (719)
|+.+++
T Consensus 403 Ir~i~~ 408 (409)
T 3hrp_A 403 IRKYAV 408 (409)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 888765
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.21 E-value=1.3e-09 Score=113.07 Aligned_cols=235 Identities=11% Similarity=0.023 Sum_probs=148.7
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasg 142 (719)
.........|++++. .+++++..++.|..|+.. + . ...+..+...+.+++|++ +++++++.
T Consensus 43 ~~~~~egp~~~~~g~-------~l~~~d~~~~~i~~~~~~-------g---~-~~~~~~~~~~~~gl~~d~-dG~l~v~~ 103 (305)
T 3dr2_A 43 QATWSEGPAWWEAQR-------TLVWSDLVGRRVLGWRED-------G---T-VDVLLDATAFTNGNAVDA-QQRLVHCE 103 (305)
T ss_dssp CCSSEEEEEEEGGGT-------EEEEEETTTTEEEEEETT-------S---C-EEEEEESCSCEEEEEECT-TSCEEEEE
T ss_pred CCcCccCCeEeCCCC-------EEEEEECCCCEEEEEeCC-------C---C-EEEEeCCCCccceeeECC-CCCEEEEE
Confidence 334566899999873 478888889999999862 2 2 344555667889999999 77877666
Q ss_pred eCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEE----EeC-------------CCcEEEEECCC
Q 046451 143 ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILAS----TSY-------------NGTTVVWDLKK 205 (719)
Q Consensus 143 s~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s----~s~-------------dg~I~iwd~~~ 205 (719)
..++.|.+||.. ++ ...+ ...........+++++++++| +++++ |.. .+.|+.||..+
T Consensus 104 ~~~~~v~~~~~~-g~-~~~~--~~~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~ 178 (305)
T 3dr2_A 104 HGRRAITRSDAD-GQ-AHLL--VGRYAGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG 178 (305)
T ss_dssp TTTTEEEEECTT-SC-EEEE--ECEETTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS
T ss_pred CCCCEEEEECCC-CC-EEEE--EeccCCCccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEEEEcCCC
Confidence 666889999975 33 2221 110000112346789999997 46665 321 25678888766
Q ss_pred CceeEEecCCCCCceeEEEECCCCCcEEEEEeCCC--CCCcEEEEecCCCCC-ceEEe-eCCCCCeeEEEeCCCCCCeEE
Q 046451 206 QKPVISFSESIKRRCSVLQWNPDVATQLVVASDED--SSPALRLWDMRNTMS-PVKEF-VGHTKGVIAMSWCPNDSSYLL 281 (719)
Q Consensus 206 ~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~--~~~~I~lwDl~~~~~-~~~~~-~~h~~~V~~v~~sp~d~~~l~ 281 (719)
++..... .......++|++|++.++++..... ....|++||+..... ....+ .........+++.+ ++++.
T Consensus 179 g~~~~~~---~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~-~G~lw- 253 (305)
T 3dr2_A 179 SPLQRMA---DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDR-GGWLW- 253 (305)
T ss_dssp CCCEEEE---EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECT-TSCEE-
T ss_pred CcEEEEe---cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECC-CCCEE-
Confidence 6543322 2345678999999965555444310 012799999865320 00111 11234456788988 77744
Q ss_pred EEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCC
Q 046451 282 TCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDG 330 (719)
Q Consensus 282 sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg 330 (719)
+++.+ .|.+||. +++.+..+..+. .+.+++|++++ +.|..++.++
T Consensus 254 v~~~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~-~~L~it~~~~ 298 (305)
T 3dr2_A 254 SSSGT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQ-QRLFITGGPC 298 (305)
T ss_dssp ECCSS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTS-CEEEEEETTE
T ss_pred EecCC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCC-CEEEEEcCCe
Confidence 44444 5999998 677777776655 48899999887 5555555454
No 218
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.18 E-value=2.3e-10 Score=121.64 Aligned_cols=176 Identities=12% Similarity=0.166 Sum_probs=128.8
Q ss_pred CEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC-----CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEE
Q 046451 125 PVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE-----PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTV 199 (719)
Q Consensus 125 ~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~-----~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~ 199 (719)
.++.|++++ ...+|++|+.+ .+++|++..... ...+.... ...+.. |+.++| ++ .+|+++ .++.|+
T Consensus 39 ~~nlLais~-~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~--~~~lp~-V~~l~f--d~-~~L~v~-~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKW--EKEIPD-VIFVCF--HG-DQVLVS-TRNALY 109 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSE--EEECTT-EEEEEE--ET-TEEEEE-ESSEEE
T ss_pred cccEEEEcC-CCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceE--EeeCCC-eeEEEE--CC-CEEEEE-cCCcEE
Confidence 688999999 78889999987 466698654320 00011100 112445 999999 54 578887 889999
Q ss_pred EEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCe
Q 046451 200 VWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSY 279 (719)
Q Consensus 200 iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~ 279 (719)
+||+++......+. .+...+.++.+.+.. ++++..+| .|.+||+.+.. ... +...|++++||| +|
T Consensus 110 v~dv~sl~~~~~~~-~~~~~v~~i~~~~p~---~av~~~dG---~L~v~dl~~~~-~~~----~~~~Vs~v~WSp-kG-- 174 (388)
T 1xip_A 110 SLDLEELSEFRTVT-SFEKPVFQLKNVNNT---LVILNSVN---DLSALDLRTKS-TKQ----LAQNVTSFDVTN-SQ-- 174 (388)
T ss_dssp EEESSSTTCEEEEE-ECSSCEEEEEECSSE---EEEEETTS---EEEEEETTTCC-EEE----EEESEEEEEECS-SE--
T ss_pred EEEchhhhccCccc-eeecceeeEEecCCC---EEEEECCC---CEEEEEccCCc-ccc----ccCCceEEEEcC-Cc--
Confidence 99998876555444 466678888877552 77788887 99999998653 222 456899999999 76
Q ss_pred EEEEeCCCcEEEEECCCCeE--EEEe------c---CCCCCeEEeEEcCCCCCEEEE
Q 046451 280 LLTCAKDNRTICWDTVSGEI--VSEL------P---AGTNWNFDIHWYPKIPGVISA 325 (719)
Q Consensus 280 l~sgs~Dg~I~iwd~~~~~~--~~~l------~---~h~~~v~~l~~spdg~~~las 325 (719)
++.|..||.+++|+...++. ..++ . +|...|.+|.|.+++ .+|++
T Consensus 175 ~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~-~flv~ 230 (388)
T 1xip_A 175 LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ-DFLAV 230 (388)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS-EEEEE
T ss_pred eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCC-eEEEE
Confidence 78899999999999988775 5566 3 367889999999998 56665
No 219
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.18 E-value=7e-09 Score=107.06 Aligned_cols=235 Identities=13% Similarity=0.111 Sum_probs=152.2
Q ss_pred ccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEE
Q 046451 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVW 201 (719)
Q Consensus 122 h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iw 201 (719)
+..-..+..|++.++.++++...++.|+.||..++... . +. ....+.+++++++|. ++++ . ++.|.+|
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~---~~-----~~~~~~~i~~~~dG~-l~v~-~-~~~l~~~ 78 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-R---VT-----MDAPVSSVALRQSGG-YVAT-I-GTKFCAL 78 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-E---EE-----CSSCEEEEEEBTTSS-EEEE-E-TTEEEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-E---Ee-----CCCceEEEEECCCCC-EEEE-E-CCeEEEE
Confidence 33455688999866667777778899999999876531 1 11 234789999999985 5444 4 5689999
Q ss_pred ECCCCceeEEecC---CCCCceeEEEECCCCCcEEEEEeCCCC------CCcEEEEecCCCCCceEEeeCCCCCeeEEEe
Q 046451 202 DLKKQKPVISFSE---SIKRRCSVLQWNPDVATQLVVASDEDS------SPALRLWDMRNTMSPVKEFVGHTKGVIAMSW 272 (719)
Q Consensus 202 d~~~~~~~~~~~~---~~~~~i~~l~~sp~g~~~l~~~s~d~~------~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~ 272 (719)
|.++++....... .....++.++++++|. ++++...... .....||.+..... +..+..+......++|
T Consensus 79 d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~~~pngi~~ 156 (297)
T 3g4e_A 79 NWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQVDISNGLDW 156 (297)
T ss_dssp ETTTTEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEESBEEEEEE
T ss_pred ECCCCcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC-EEEEeeccccccceEE
Confidence 9988765432221 1234578999999995 5554432210 01244555443223 3333334456688999
Q ss_pred CCCCCCeE-EEEeCCCcEEEEEC--CCCeE-----EEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 273 CPNDSSYL-LTCAKDNRTICWDT--VSGEI-----VSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 273 sp~d~~~l-~sgs~Dg~I~iwd~--~~~~~-----~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
++ +++.| ++.+.++.|.+||+ .+++. +..+..+......++++++| ++.++...++.|.+||.++++...
T Consensus 157 sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 157 SL-DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp CT-TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEEECTTTCCEEE
T ss_pred cC-CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEEEcCCCceEEE
Confidence 99 77755 55566789999987 45543 23333344568899999999 788888778899999999877654
Q ss_pred cCCCCCCCCCccCcceecCCCceeee-eCCcEEEEccCCC
Q 046451 345 VGDSNFSAAPLRAPKWYKRPAGASFG-FGGKLVSFHPKSS 383 (719)
Q Consensus 345 ~~~~~~~~~~~~~p~w~~~~~~~s~s-~~Gklv~~~~~~~ 383 (719)
... .+. ..+..++|+ .|++.+.+.....
T Consensus 235 ~i~---------~p~--~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 235 TVK---------LPV--DKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEE---------CSS--SBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEE---------CCC--CCceEEEEeCCCCCEEEEEcCCc
Confidence 221 111 124567887 7887766665544
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.17 E-value=3.5e-09 Score=114.14 Aligned_cols=264 Identities=10% Similarity=0.049 Sum_probs=158.4
Q ss_pred eEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceee--cccCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 12 SVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLV--GESPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 12 ~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~--~~~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
.++|||||++|.++.....-...-..++.|.++|..+.+....+.+- ...........++|++|+ ++|++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDG--------k~lyV 193 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDN--------KNLLF 193 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTS--------SEEEE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCC--------CEEEE
Confidence 79999999988887631000000001345578887765544444321 000012345689999998 67777
Q ss_pred EcC--CCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC-Ccc
Q 046451 90 GLV--DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP-PLR 166 (719)
Q Consensus 90 gs~--dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~-~l~ 166 (719)
+.. ++.|.++|+ .+. +.+..+..-. . ....+.+.+.+++.+.||++.+.++.+++...... .+.
T Consensus 194 ~n~~~~~~VsVID~------~t~---kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~ 260 (426)
T 3c75_H 194 YQFSPAPAVGVVDL------EGK---TFDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFH 260 (426)
T ss_dssp EECSSSCEEEEEET------TTT---EEEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCS
T ss_pred EecCCCCeEEEEEC------CCC---eEEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeec
Confidence 653 678999999 444 5555554311 1 22334344677777888888888884443321100 010
Q ss_pred CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCcee--EEecCC---------CCCceeEEEECCCCCcEEEE
Q 046451 167 GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPV--ISFSES---------IKRRCSVLQWNPDVATQLVV 235 (719)
Q Consensus 167 ~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~--~~~~~~---------~~~~i~~l~~sp~g~~~l~~ 235 (719)
. ........+.|.+++. .++..+.++.|.+.|+...... ..+... .......+++++++++++++
T Consensus 261 v---~~~p~~~~~~~~~dg~-~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa 336 (426)
T 3c75_H 261 T---EDELLINHPAFSLRSG-RLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLL 336 (426)
T ss_dssp C---TTSCBCSCCEECTTTC-EEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEE
T ss_pred c---CCCceeeEeeecCCCC-EEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEE
Confidence 0 0011112356788875 4444567889999999765422 111100 01122337899998776666
Q ss_pred EeCCC------CCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCC-eEEEEe-CCCcEEEEECCCCeEEEEe
Q 046451 236 ASDED------SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS-YLLTCA-KDNRTICWDTVSGEIVSEL 303 (719)
Q Consensus 236 ~s~d~------~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~-~l~sgs-~Dg~I~iwd~~~~~~~~~l 303 (719)
....+ ..+.|.++|+.+. +.+.++... .....|.|++ |++ ++++.. .++.|.|+|+.+++.+.++
T Consensus 337 ~~~~~~gthk~~s~~VsVID~~T~-kvv~~I~vg-~~P~gia~sp-Dg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 337 VDQRDEWKHKAASRFVVVLNAETG-ERINKIELG-HEIDSINVSQ-DAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEECCTTCTTSCEEEEEEEETTTC-CEEEEEEEE-EEECEEEECC-SSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred ecccccccccCCCCEEEEEECCCC-eEEEEEECC-CCcCeEEEcc-CCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 54210 1237999999875 556666432 2578999999 777 888877 5999999999999999887
No 221
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.15 E-value=3e-08 Score=105.68 Aligned_cols=226 Identities=15% Similarity=0.132 Sum_probs=143.7
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec------c-ccCCEEEEEEeCCCCCEEEEEeCC------CcEEEE
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS------R-HKGPVRGLEFNSFTPNLLASGADD------GEICIW 151 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~------~-h~~~V~~l~fsp~~~~~lasgs~d------g~I~iw 151 (719)
.+++.|..++.|.++|+.+.. ...+..+.+. . ....-..+.+.+ ++ +++++..+ |.|.++
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p-----~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNP-----REPKIIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCT-----TSCEEEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEE
T ss_pred EEEEccCCCCeEEEEECCCCC-----CCceeeeeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEE
Confidence 677778889999999984211 1113334442 1 112345677788 66 77776665 789999
Q ss_pred cCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe-------------------CCCcEEEEECCCCceeEEe
Q 046451 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS-------------------YNGTTVVWDLKKQKPVISF 212 (719)
Q Consensus 152 dl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s-------------------~dg~I~iwd~~~~~~~~~~ 212 (719)
|..+.+.+..+..-. .....-..+.|++++ +.+++.. .+.+|.+||+.+++.+.++
T Consensus 170 D~~T~~v~~~~~~~~----~~~~~~Yd~~~~p~~-~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI 244 (462)
T 2ece_A 170 DHYSFEPLGKWEIDR----GDQYLAYDFWWNLPN-EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSL 244 (462)
T ss_dssp CTTTCCEEEECCSBC----TTCCCCCCEEEETTT-TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEE
T ss_pred ECCCCeEEEEEccCC----CCccccceEEECCCC-CEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEE
Confidence 999988766642111 112234468889997 4676664 3689999999998888888
Q ss_pred cCC-CCCceeEEEE--CCCCCcEEEEEe-----CCCCCCcEEEEecCCCC-CceEEe--eC----------------CCC
Q 046451 213 SES-IKRRCSVLQW--NPDVATQLVVAS-----DEDSSPALRLWDMRNTM-SPVKEF--VG----------------HTK 265 (719)
Q Consensus 213 ~~~-~~~~i~~l~~--sp~g~~~l~~~s-----~d~~~~~I~lwDl~~~~-~~~~~~--~~----------------h~~ 265 (719)
..+ .......|.| +|+++..++++. .++ +|.+|....+. +.+..+ .. -..
T Consensus 245 ~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss---~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~ 321 (462)
T 2ece_A 245 TLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSS---SIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPP 321 (462)
T ss_dssp ESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCE---EEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECC
T ss_pred ecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCc---eEEEEEecCCceeEEEEEeCCCccccccccccccccccCCC
Confidence 742 2234455655 999977666666 554 78776654321 001111 00 023
Q ss_pred CeeEEEeCCCCCCeEEEEe-CCCcEEEEECC---CCeEEEEecCCCC--------------CeEEeEEcCCCCCEEEEEe
Q 046451 266 GVIAMSWCPNDSSYLLTCA-KDNRTICWDTV---SGEIVSELPAGTN--------------WNFDIHWYPKIPGVISASS 327 (719)
Q Consensus 266 ~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~---~~~~~~~l~~h~~--------------~v~~l~~spdg~~~las~s 327 (719)
....|.+|+ |+++|+++. ..+.|.+||+. +.+.+..+..... .-..+.+++||+ +|+++.
T Consensus 322 ~pa~I~lS~-DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk-~LyVaN 399 (462)
T 2ece_A 322 LVTDIDISL-DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGR-RVYVTN 399 (462)
T ss_dssp CCCCEEECT-TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSS-EEEEEC
T ss_pred ceeEEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCC-EEEEEc
Confidence 567899999 888777766 46899999985 3456666544311 357899999995 555444
No 222
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.13 E-value=1.7e-09 Score=114.17 Aligned_cols=239 Identities=13% Similarity=0.045 Sum_probs=149.5
Q ss_pred CCEEEEEEeCCCCCEEEEEe--CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC-----CC
Q 046451 124 GPVRGLEFNSFTPNLLASGA--DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY-----NG 196 (719)
Q Consensus 124 ~~V~~l~fsp~~~~~lasgs--~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~-----dg 196 (719)
.....+++++ +++++++.. .++.++||.+.+++ ...+.........+...+..+++++++ +++++-.. ++
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNG-IVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSS-EEEEEECHHHHTSCC
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCC-cEEEEcCCCCcCCCC
Confidence 6789999998 788888864 23435555554332 222211111222355689999999996 45554433 57
Q ss_pred cEEEEECCCCceeEEecCC-----CCCceeEEEECCCCCcEEEEEe---CCCCCCcEEEEecCCCCCceEEeeCC-----
Q 046451 197 TTVVWDLKKQKPVISFSES-----IKRRCSVLQWNPDVATQLVVAS---DEDSSPALRLWDMRNTMSPVKEFVGH----- 263 (719)
Q Consensus 197 ~I~iwd~~~~~~~~~~~~~-----~~~~i~~l~~sp~g~~~l~~~s---~d~~~~~I~lwDl~~~~~~~~~~~~h----- 263 (719)
.|.+||+.+++.+..+... ....+..+++++++..++++.. .++ .|.+||+.++ +..+.+.+|
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~---~i~v~d~~~g-~~~r~~~~~~~~~~ 169 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA---ALIRVDLQTG-LAARVLQGYPGIAP 169 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC---EEEEEETTTC-CEEEECTTCTTTSC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC---eEEEEECCCC-CEEEEecCCCcccc
Confidence 8999999998877666421 2245689999987555566654 344 8999998754 333333221
Q ss_pred ------------------------CCCeeEEEeCCCCCCeEEEEeCCC-cEEEEECC---CCe-----EEE--EecCCCC
Q 046451 264 ------------------------TKGVIAMSWCPNDSSYLLTCAKDN-RTICWDTV---SGE-----IVS--ELPAGTN 308 (719)
Q Consensus 264 ------------------------~~~V~~v~~sp~d~~~l~sgs~Dg-~I~iwd~~---~~~-----~~~--~l~~h~~ 308 (719)
...+..|+|++ +++.|+.+..++ .|..+|.. .+. ... ...++..
T Consensus 170 ~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 248 (343)
T 2qe8_A 170 EDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKP 248 (343)
T ss_dssp CSCCCEETTEECBEECTTSCEECCCCCEEEEEECT-TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECC
T ss_pred cccceeECCEEEEeccCCCceeceecccceeEecc-CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCC
Confidence 12367899999 888888877665 55555432 110 000 1112333
Q ss_pred CeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccC
Q 046451 309 WNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPK 381 (719)
Q Consensus 309 ~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~ 381 (719)
....++++++| .++++...++.|.+||.++++...... .+ -...+.+++|+.+|++++....
T Consensus 249 ~pdgia~d~~G-~l~va~~~~~~V~~~d~~~G~~~~~~~---------~~-~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 249 ICDGISIDKDH-NIYVGDLAHSAIGVITSADRAYKLLVT---------DE-KLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp SCSCEEECTTC-CEEEEEGGGTEEEEEETTTTEEEEEEE---------CG-GGSCEEEEEECTTSCEEEEECC
T ss_pred CCceEEECCCC-CEEEEccCCCeEEEEECCCCCEEEEEE---------CC-ceecCCeeEECCCCcEEEEeCc
Confidence 46679999998 799998889999999985554322111 01 0223567899999998776653
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.13 E-value=1.6e-08 Score=105.93 Aligned_cols=227 Identities=11% Similarity=-0.003 Sum_probs=142.6
Q ss_pred EEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC
Q 046451 126 VRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK 205 (719)
Q Consensus 126 V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~ 205 (719)
..+..|+++++.++++...++.|.+||..+++.. . +. ....+.++.|+++| +++++ +.+ .|.+||..+
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~---~~-----~~~~v~~i~~~~dg-~l~v~-~~~-gl~~~d~~~ 118 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-V---HA-----LPFMGSALAKISDS-KQLIA-SDD-GLFLRDTAT 118 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-E---EE-----CSSCEEEEEEEETT-EEEEE-ETT-EEEEEETTT
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-E---EE-----CCCcceEEEEeCCC-eEEEE-ECC-CEEEEECCC
Confidence 4678899955667777778899999998875422 1 11 12478999999997 35544 444 499999988
Q ss_pred CceeEEecC---CCCCceeEEEECCCCCcEEEEEeCCC---CCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCe
Q 046451 206 QKPVISFSE---SIKRRCSVLQWNPDVATQLVVASDED---SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSY 279 (719)
Q Consensus 206 ~~~~~~~~~---~~~~~i~~l~~sp~g~~~l~~~s~d~---~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~ 279 (719)
++....... .....+..++++++|. ++++...+. ..+.|..+| + .+ +..+..+......++|++ +++.
T Consensus 119 g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~-g~-~~~~~~~~~~~~~i~~s~-dg~~ 192 (326)
T 2ghs_A 119 GVLTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--K-GK-VTKLFADISIPNSICFSP-DGTT 192 (326)
T ss_dssp CCEEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--T-TE-EEEEEEEESSEEEEEECT-TSCE
T ss_pred CcEEEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--C-Cc-EEEeeCCCcccCCeEEcC-CCCE
Confidence 775433221 1124688999999985 454443210 111455555 2 22 333333334567899999 7776
Q ss_pred EEEE-eCCCcEEEEECC--CC-e-----EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCC
Q 046451 280 LLTC-AKDNRTICWDTV--SG-E-----IVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNF 350 (719)
Q Consensus 280 l~sg-s~Dg~I~iwd~~--~~-~-----~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~ 350 (719)
|+.+ +.++.|.+||+. ++ + .+..+......+.+++++++| .++++...++.|.+||.. ++.+....
T Consensus 193 lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~~d~~-g~~~~~i~--- 267 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYDTD-GNHIARYE--- 267 (326)
T ss_dssp EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEEECTT-CCEEEEEE---
T ss_pred EEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEEECCC-CCEEEEEE---
Confidence 6544 567899999985 55 3 233344344567889999999 677777667899999984 44332111
Q ss_pred CCCCccCcceecCCCceeee-eCCcEEEEccCCC
Q 046451 351 SAAPLRAPKWYKRPAGASFG-FGGKLVSFHPKSS 383 (719)
Q Consensus 351 ~~~~~~~p~w~~~~~~~s~s-~~Gklv~~~~~~~ 383 (719)
.+. ..+..++|+ .+++.+.+.....
T Consensus 268 ------~~~--~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 268 ------VPG--KQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp ------CSC--SBEEEEEEESTTSCEEEEEEBCT
T ss_pred ------CCC--CCcEEEEEecCCCCEEEEEecCC
Confidence 110 123567887 7877665554443
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.12 E-value=3.9e-10 Score=119.53 Aligned_cols=254 Identities=10% Similarity=-0.057 Sum_probs=163.7
Q ss_pred eEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEc----------CCCcEEEEcCCccccCCC
Q 046451 40 NLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGL----------VDGSIDIWNPLSLISSGE 109 (719)
Q Consensus 40 ~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs----------~dg~I~lwd~~~~~~~~~ 109 (719)
.+.++|.++.+...++.. + ... .+.+++|+ ++|+++. .++.|.+||+ .+
T Consensus 47 ~vsvID~~t~~v~~~i~v----G-~~P--~i~~spDg--------~~lyVan~~~~r~~~G~~~~~VsviD~------~T 105 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLG----A-FLS--LAVAGHSG--------SDFALASTSFARSAKGKRTDYVEVFDP------VT 105 (368)
T ss_dssp EEEEEETTTTEEEEEEEE----C-TTC--EEEECTTS--------SCEEEEEEEETTTTSSSEEEEEEEECT------TT
T ss_pred eEEEEECCCCeEEEEEeC----C-CCC--ceEECCCC--------CEEEEEcccccccccCCCCCEEEEEEC------CC
Confidence 667888876654444332 1 123 79999998 5666654 4788999999 45
Q ss_pred CCCCCceeeeccc-------cCCEEEEEEeCCCCCEEEEEeC--CCcEEE--EcCCCCCCCCccCCccCCCCCCCCCeEE
Q 046451 110 TGGNPLIAHLSRH-------KGPVRGLEFNSFTPNLLASGAD--DGEICI--WDLSAPAEPSHFPPLRGNGSAAQGEISF 178 (719)
Q Consensus 110 ~~~~~~~~~l~~h-------~~~V~~l~fsp~~~~~lasgs~--dg~I~i--wdl~~~~~~~~~~~l~~~~~~h~~~I~~ 178 (719)
. +.+.++... ......+.|++ |+++|+++.. +..|.+ +|+.+ ...+ ... . +
T Consensus 106 ~---~vv~~I~v~~~~~~~~g~~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~~t---v~~i---~v~------~--~ 167 (368)
T 1mda_H 106 F---LPIADIELPDAPRFSVGPRVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASD---DQLT---KSA------S--C 167 (368)
T ss_dssp C---CEEEEEEETTSCSCCBSCCTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEE---EEEE---ECS------S--C
T ss_pred C---CEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEccCCCCeEEEEEEchhh---ceEE---ECC------C--c
Confidence 5 666666433 12356899999 7788877764 467888 99877 2222 110 0 1
Q ss_pred EEecCCCCcEEEEEeCCCcEEEEECCC-----CceeEE----ecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEe
Q 046451 179 VSWNSKVQHILASTSYNGTTVVWDLKK-----QKPVIS----FSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWD 249 (719)
Q Consensus 179 l~~sp~g~~~l~s~s~dg~I~iwd~~~-----~~~~~~----~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwD 249 (719)
+.+.+++...+++.+.||.+.+.|+.+ ++.+.. +. ...... . .+++..++++.. + .|.+.|
T Consensus 168 ~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~-vg~~P~---~-~~~~~~~~~vs~--~---~V~viD 237 (368)
T 1mda_H 168 FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQN-CSSQAA---Q-ANYPGMLVWAVA--S---SILQGD 237 (368)
T ss_dssp CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSC-BCSCCE---E-ETTTTEEEECBS--S---CCEEEE
T ss_pred eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeee-CCCCcc---c-cccCCEEEEEcC--C---EEEEEE
Confidence 123455666777888899999999987 433211 11 112222 3 555544444444 4 799999
Q ss_pred cCCCCC-ceEEeeC-------C---CCCeeEEEeCCCCCCeEEEEeC---------CCcEEEEECCCCeEEEEecCCCCC
Q 046451 250 MRNTMS-PVKEFVG-------H---TKGVIAMSWCPNDSSYLLTCAK---------DNRTICWDTVSGEIVSELPAGTNW 309 (719)
Q Consensus 250 l~~~~~-~~~~~~~-------h---~~~V~~v~~sp~d~~~l~sgs~---------Dg~I~iwd~~~~~~~~~l~~h~~~ 309 (719)
+..... .+..+.. + ......++|++ |++.|+.+.. ++.+.+||+.+++.+.++.... .
T Consensus 238 ~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~-dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~ 315 (368)
T 1mda_H 238 IPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLK-NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-D 315 (368)
T ss_dssp CCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEET-TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-E
T ss_pred CCCCcceEEEEEEeccccccccccccCcceeeEEcC-CCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-C
Confidence 864321 1111110 0 11222368999 7776665533 2356799999999999887654 4
Q ss_pred eEEeEEcCCCCCEEEEEe-CCCcEEEEeCCCCcccc
Q 046451 310 NFDIHWYPKIPGVISASS-FDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 310 v~~l~~spdg~~~las~s-~Dg~I~iwd~~~~~~~~ 344 (719)
...|.|++||..++++.. .++.|.++|+.+.+.+.
T Consensus 316 p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~ 351 (368)
T 1mda_H 316 SDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS 351 (368)
T ss_dssp ECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred cceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEE
Confidence 889999999976888888 69999999999999876
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.10 E-value=1.4e-08 Score=117.41 Aligned_cols=268 Identities=14% Similarity=0.152 Sum_probs=161.5
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccc--cC---CEE-EEEEeCCCCCEEEEEe------CCCcEEEEc
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRH--KG---PVR-GLEFNSFTPNLLASGA------DDGEICIWD 152 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h--~~---~V~-~l~fsp~~~~~lasgs------~dg~I~iwd 152 (719)
+.|++++.|+.|..+|. .++ +.+..+... .. .+. +..+. + ..+++++ .+|.|+.||
T Consensus 122 g~v~v~~~dg~l~AlDa------~TG---~~~W~~~~~~~~~~~~~~~~sP~v~--~-g~v~vg~~~~~~~~~g~v~a~D 189 (689)
T 1yiq_A 122 GKVYVGVLDGRLEAIDA------KTG---QRAWSVDTRADHKRSYTITGAPRVV--N-GKVVIGNGGAEFGVRGYVTAYD 189 (689)
T ss_dssp TEEEEECTTSEEEEEET------TTC---CEEEEEECCSCTTSCCBCCSCCEEE--T-TEEEECCBCTTTCCBCEEEEEE
T ss_pred CEEEEEccCCEEEEEEC------CCC---CEeeeecCcCCCCCCccccCCcEEE--C-CEEEEEeCCCccCCCCEEEEEE
Confidence 57888889999999998 556 555554431 11 111 11111 3 3444443 368999999
Q ss_pred CCCCCCCCccCCccCCCC------------------------CCCCCeEEEEecCCCCcEEEEEeCCCc-----------
Q 046451 153 LSAPAEPSHFPPLRGNGS------------------------AAQGEISFVSWNSKVQHILASTSYNGT----------- 197 (719)
Q Consensus 153 l~~~~~~~~~~~l~~~~~------------------------~h~~~I~~l~~sp~g~~~l~s~s~dg~----------- 197 (719)
..+++.+..+........ ........+++++++ .+++.++.++.
T Consensus 190 ~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~-~~vy~~~~~g~~w~~~~~~~~~ 268 (689)
T 1yiq_A 190 AETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPEL-NLLYIGVGNGSLWDPKWRSQAK 268 (689)
T ss_dssp TTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHHTTC
T ss_pred CCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCC-CEEEEeCCCCCccccCCCCCCC
Confidence 999886544321110000 001111257788875 47888877763
Q ss_pred --------EEEEECCCCceeEEecCC-CC-------CceeEEEECCCCC--cEEEEEeCCCCCCcEEEEecCCCCCceEE
Q 046451 198 --------TVVWDLKKQKPVISFSES-IK-------RRCSVLQWNPDVA--TQLVVASDEDSSPALRLWDMRNTMSPVKE 259 (719)
Q Consensus 198 --------I~iwd~~~~~~~~~~~~~-~~-------~~i~~l~~sp~g~--~~l~~~s~d~~~~~I~lwDl~~~~~~~~~ 259 (719)
|..||.++++.+..+... +. ..........+|+ ..++.+..++ .|+++|.+++ +.+..
T Consensus 269 gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G---~l~~lD~~tG-~~l~~ 344 (689)
T 1yiq_A 269 GDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNG---FFYVIDRATG-ELLSA 344 (689)
T ss_dssp SCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTS---EEEEEETTTC-CEEEE
T ss_pred CCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCC---eEEEEECCCC-CEecc
Confidence 999999999999887632 11 1111122222442 2567777776 8999999876 33321
Q ss_pred eeC-CCC--------------------------------------CeeEEEeCCCCCCeEEEEeC---------------
Q 046451 260 FVG-HTK--------------------------------------GVIAMSWCPNDSSYLLTCAK--------------- 285 (719)
Q Consensus 260 ~~~-h~~--------------------------------------~V~~v~~sp~d~~~l~sgs~--------------- 285 (719)
... ... .-..++|+| +..+|++...
T Consensus 345 ~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~~ 423 (689)
T 1yiq_A 345 KGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP-DTGLVYIPAHIMSAYYEHIPEAPKR 423 (689)
T ss_dssp EESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET-TTTEEEEEEEECCEEEECCSSCCCC
T ss_pred ccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC-CCCEEEEeccccceeeeeccccccc
Confidence 110 000 011267788 6566665532
Q ss_pred ------------------------------CCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEE
Q 046451 286 ------------------------------DNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIY 335 (719)
Q Consensus 286 ------------------------------Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iw 335 (719)
+|.|+.||+.+|+.+.++..+.. +....+...+ .+++.++.||.|+.|
T Consensus 424 ~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~g~~~tag-glvf~gt~dg~l~a~ 501 (689)
T 1yiq_A 424 NPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI-FNGGTLSTAG-NLVFEGSADGRVIAY 501 (689)
T ss_dssp CSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS-CCCCEEEETT-TEEEEECTTSEEEEE
T ss_pred cccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC-ccCccceECC-CEEEEECCCCcEEEE
Confidence 37899999999999988876654 3334555566 688999999999999
Q ss_pred eCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCC
Q 046451 336 NIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKS 382 (719)
Q Consensus 336 d~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~ 382 (719)
|.++++.+-.....-.. . ..-++|..|||.++.-..+
T Consensus 502 D~~tG~~lw~~~~~~~~--~--------~~p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 502 AADTGEKLWEQPAASGV--M--------AAPVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp ETTTCCEEEEEECSSCC--C--------SCCEEEEETTEEEEEEEEC
T ss_pred ECCCCccceeeeCCCCc--c--------cCceEEEECCEEEEEEEec
Confidence 99999886522211110 0 1226778999965444433
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.05 E-value=2.5e-08 Score=115.04 Aligned_cols=268 Identities=13% Similarity=0.103 Sum_probs=165.6
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccc-c----CCEE-EEEEeCCCCCEEEEEeC------CCcEEEEc
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRH-K----GPVR-GLEFNSFTPNLLASGAD------DGEICIWD 152 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h-~----~~V~-~l~fsp~~~~~lasgs~------dg~I~iwd 152 (719)
+.|++++.|+.|..+|. .++ +.+..+..+ . ..+. ..... + ..+++++. ++.|+.||
T Consensus 129 ~~v~v~~~dg~l~alD~------~tG---~~~W~~~~~~~~~~~~~~~~~p~v~--~-~~v~v~~~~~~~~~~g~v~a~D 196 (677)
T 1kb0_A 129 GKVYVGAWDGRLIALDA------ATG---KEVWHQNTFEGQKGSLTITGAPRVF--K-GKVIIGNGGAEYGVRGYITAYD 196 (677)
T ss_dssp TEEEEECTTSEEEEEET------TTC---CEEEEEETTTTCCSSCBCCSCCEEE--T-TEEEECCBCTTTCCBCEEEEEE
T ss_pred CEEEEEcCCCEEEEEEC------CCC---CEEeeecCCcCcCcCcccccCcEEE--C-CEEEEEecccccCCCCEEEEEE
Confidence 57888889999999998 566 666666543 1 1121 11121 3 45555543 68999999
Q ss_pred CCCCCCCCccCCccCCC----------------C---------CCCCCeEEEEecCCCCcEEEEEeCCC-----------
Q 046451 153 LSAPAEPSHFPPLRGNG----------------S---------AAQGEISFVSWNSKVQHILASTSYNG----------- 196 (719)
Q Consensus 153 l~~~~~~~~~~~l~~~~----------------~---------~h~~~I~~l~~sp~g~~~l~s~s~dg----------- 196 (719)
..+++.+..+....... . ........+++++++ .+|+.++.++
T Consensus 197 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~-~~vy~~~~~~~~w~~~~~~~~ 275 (677)
T 1kb0_A 197 AETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAEL-NTMYVGTGNGSPWSHKVRSPK 275 (677)
T ss_dssp TTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHSTT
T ss_pred CCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCC-CEEEEECCCCccccCCCCCcc
Confidence 99988664432111100 0 001112356788876 4777766654
Q ss_pred --------cEEEEECCCCceeEEecCCCC--------CceeEEEECCCCC--cEEEEEeCCCCCCcEEEEecCCCCCceE
Q 046451 197 --------TTVVWDLKKQKPVISFSESIK--------RRCSVLQWNPDVA--TQLVVASDEDSSPALRLWDMRNTMSPVK 258 (719)
Q Consensus 197 --------~I~iwd~~~~~~~~~~~~~~~--------~~i~~l~~sp~g~--~~l~~~s~d~~~~~I~lwDl~~~~~~~~ 258 (719)
.|..+|.++++.+..+...+. .....+....+|+ ..++.+..++ .|+++|.+++ +.+.
T Consensus 276 ~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G---~l~~lD~~tG-~~l~ 351 (677)
T 1kb0_A 276 GGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNG---FFFVLDRTNG-KFIS 351 (677)
T ss_dssp CCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTS---EEEEEETTTC-CEEE
T ss_pred CCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCC---EEEEEECCCC-CEec
Confidence 599999999999888764221 1222233333553 4677777776 8999999876 4443
Q ss_pred EeeCCC-C----------Ce------------------------eEEEeCCCCCCeEEEEeC------------------
Q 046451 259 EFVGHT-K----------GV------------------------IAMSWCPNDSSYLLTCAK------------------ 285 (719)
Q Consensus 259 ~~~~h~-~----------~V------------------------~~v~~sp~d~~~l~sgs~------------------ 285 (719)
.+.... . .+ ..++|+| +..+|++...
T Consensus 352 ~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~g~~~ 430 (677)
T 1kb0_A 352 AKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP-QTGLVYLPAQNVPVNLMDDKKWEFNQAG 430 (677)
T ss_dssp EEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET-TTTEEEEEEEECCCEEEECTTCCTTCCC
T ss_pred cccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC-CCCEEEEeChhcceeeeccccccccccc
Confidence 332110 0 00 1467888 6667766543
Q ss_pred -------------------------CCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 046451 286 -------------------------DNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 286 -------------------------Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~ 340 (719)
.|.|..||+.+++.+.++.... .+.+..+..++ .+++.++.||.|++||+.++
T Consensus 431 ~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~~~g-~~v~~g~~dg~l~a~D~~tG 508 (677)
T 1kb0_A 431 PGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS-PWNGGTLTTAG-NVVFQGTADGRLVAYHAATG 508 (677)
T ss_dssp TTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETT-TEEEEECTTSEEEEEETTTC
T ss_pred ccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC-CCcCcceEeCC-CEEEEECCCCcEEEEECCCC
Confidence 2789999999999998876443 34555666676 58888899999999999999
Q ss_pred cccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCC
Q 046451 341 SRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKS 382 (719)
Q Consensus 341 ~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~ 382 (719)
+.+......-.. ...-+++..+||.++....+
T Consensus 509 ~~lw~~~~~~~~----------~~~p~~y~~~G~~~v~~~~G 540 (677)
T 1kb0_A 509 EKLWEAPTGTGV----------VAAPSTYMVDGRQYVSVAVG 540 (677)
T ss_dssp CEEEEEECSSCC----------CSCCEEEEETTEEEEEEEEC
T ss_pred ceeeeeeCCCCc----------ccCCEEEEeCCEEEEEEecc
Confidence 886532211110 01235677899866544333
No 227
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.04 E-value=1e-07 Score=101.60 Aligned_cols=228 Identities=11% Similarity=-0.010 Sum_probs=141.8
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
+.|+.++.++.|..+|. .++ +.+................ +..++.++.++.|..+|..+++....+..
T Consensus 104 ~~v~v~~~~g~l~a~d~------~tG---~~~W~~~~~~~~~~~p~~~---~~~v~v~~~~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 104 GHVYIGSEKAQVYALNT------SDG---TVAWQTKVAGEALSRPVVS---DGLVLIHTSNGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp TEEEEEETTSEEEEEET------TTC---CEEEEEECSSCCCSCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CEEEEEcCCCEEEEEEC------CCC---CEEEEEeCCCceEcCCEEE---CCEEEEEcCCCeEEEEECCCCcEEEEEeC
Confidence 47888888999999998 455 5555544333222222332 35788889999999999988876544211
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc---------e-eEEEECCCCCcEEE
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR---------C-SVLQWNPDVATQLV 234 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~---------i-~~l~~sp~g~~~l~ 234 (719)
...... .. ........ + ..+++++.++.|..+|.++++.+..+....... + ....+. + ..++
T Consensus 172 ~~~~~~-~~-~~~~~~~~-~--~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~-~--~~v~ 243 (376)
T 3q7m_A 172 DMPSLS-LR-GESAPTTA-F--GAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV-N--GVVF 243 (376)
T ss_dssp CC------C-CCCCCEEE-T--TEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE-T--TEEE
T ss_pred CCCcee-ec-CCCCcEEE-C--CEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE-C--CEEE
Confidence 000000 00 00111222 2 367778889999999999999887765221100 1 111111 2 2466
Q ss_pred EEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC-CCCCeEEe
Q 046451 235 VASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA-GTNWNFDI 313 (719)
Q Consensus 235 ~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~-h~~~v~~l 313 (719)
+++.++ .|..+|.+++. .+.... ......+.. ++..|+.++.++.|..+|..+++.+..... ....+...
T Consensus 244 ~~~~~g---~l~~~d~~tG~-~~w~~~--~~~~~~~~~---~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~ 314 (376)
T 3q7m_A 244 ALAYNG---NLTALDLRSGQ-IMWKRE--LGSVNDFIV---DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSP 314 (376)
T ss_dssp EECTTS---CEEEEETTTCC-EEEEEC--CCCEEEEEE---ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCC
T ss_pred EEecCc---EEEEEECCCCc-EEeecc--CCCCCCceE---ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCC
Confidence 666665 79999998763 333332 233444444 356788888999999999999998887762 22223334
Q ss_pred EEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 314 HWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 314 ~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
... + ..|+.++.+|.|.+||..+++...
T Consensus 315 ~~~--~-~~l~v~~~~g~l~~~d~~tG~~~~ 342 (376)
T 3q7m_A 315 VLY--N-GNLVVGDSEGYLHWINVEDGRFVA 342 (376)
T ss_dssp EEE--T-TEEEEECTTSEEEEEETTTCCEEE
T ss_pred EEE--C-CEEEEEeCCCeEEEEECCCCcEEE
Confidence 443 2 477788889999999999988765
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.00 E-value=1.5e-08 Score=107.25 Aligned_cols=266 Identities=8% Similarity=-0.047 Sum_probs=156.9
Q ss_pred eEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecc--cCCCCCceeeeecCCCCCCCCCccceEEE
Q 046451 12 SVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE--SPSSERFNRLAWGKNGSGSEDFSLGLVAG 89 (719)
Q Consensus 12 ~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~--~~~~~~V~~l~~sp~g~~~~~~~~~~las 89 (719)
.++|||||++|.++.....-...-..++.|.+||+.+.+...++.+-.. .........++|++|| ++|++
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDG--------k~lyV 140 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASS--------ACLLF 140 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTS--------SCEEE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCC--------CEEEE
Confidence 7999999999888863100000001235568899887766555433100 0011346689999998 57777
Q ss_pred EcC--CCcEEE--EcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCC-----CCCCC
Q 046451 90 GLV--DGSIDI--WNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA-----PAEPS 160 (719)
Q Consensus 90 gs~--dg~I~l--wd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~-----~~~~~ 160 (719)
+.. +..|.+ +|+.+ +..+.. .+. +.+.+.+...+++.+.||.+.+.|+.+ ++...
T Consensus 141 an~~~~~~v~V~~iD~~t------------v~~i~v-~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~ 204 (368)
T 1mda_H 141 FLFGSSAAAGLSVPGASD------------DQLTKS-ASC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGA 204 (368)
T ss_dssp EECSSSCEEEEEETTTEE------------EEEEEC-SSC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCC
T ss_pred EccCCCCeEEEEEEchhh------------ceEEEC-CCc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEE
Confidence 654 467888 89832 222221 111 123343456667777889998889876 32221
Q ss_pred ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc--eeEEecCC---------CCCceeEEEECCCC
Q 046451 161 HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK--PVISFSES---------IKRRCSVLQWNPDV 229 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~~---------~~~~i~~l~~sp~g 229 (719)
... .......... . .++++ .++..+. +.|.+.|+.+.. .+..+... .......++|++++
T Consensus 205 ~~t---~~i~vg~~P~---~-~~~~~-~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg 275 (368)
T 1mda_H 205 QCT---GAQNCSSQAA---Q-ANYPG-MLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNT 275 (368)
T ss_dssp CSC---TTSCBCSCCE---E-ETTTT-EEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTT
T ss_pred Eee---eeeeCCCCcc---c-cccCC-EEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCC
Confidence 100 0000011222 3 45544 4444445 899999997543 22222210 01112237899999
Q ss_pred CcEEEEEe-C-------CCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCC-eEEEEe-CCCcEEEEECCCCeE
Q 046451 230 ATQLVVAS-D-------EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSS-YLLTCA-KDNRTICWDTVSGEI 299 (719)
Q Consensus 230 ~~~l~~~s-~-------d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~-~l~sgs-~Dg~I~iwd~~~~~~ 299 (719)
++++++.. . ++ .+.++|+.+. +.+..+.... ....|+|++ |++ +++++. .++.|.++|+.+++.
T Consensus 276 ~~lyV~~~~~~~~~~~~~~---~~~ViD~~t~-~vv~~i~vg~-~p~gi~~s~-Dg~~l~va~~~~~~~VsVID~~t~kv 349 (368)
T 1mda_H 276 DGIMILTVEHSRSCLAAAE---NTSSVTASVG-QTSGPISNGH-DSDAIIAAQ-DGASDNYANSAGTEVLDIYDAASDQD 349 (368)
T ss_dssp TEEEEEEEECSSCTTSCEE---EEEEEESSSC-CEEECCEEEE-EECEEEECC-SSSCEEEEEETTTTEEEEEESSSCEE
T ss_pred CEEEEEeccccCcccccCC---CEEEEECCCC-eEEEEEECCC-CcceEEECC-CCCEEEEEccCCCCeEEEEECCCCcE
Confidence 77666554 2 22 4669999875 5555554332 578999999 666 566777 599999999999999
Q ss_pred EEEecCCCCCeEEeEEcC
Q 046451 300 VSELPAGTNWNFDIHWYP 317 (719)
Q Consensus 300 ~~~l~~h~~~v~~l~~sp 317 (719)
+.++..+.. ...+++.+
T Consensus 350 v~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 350 QSSVELDKG-PESLSVQN 366 (368)
T ss_dssp EEECCCCSC-CCEEECCC
T ss_pred EEEEECCCC-CCEEEeec
Confidence 999986654 55666654
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.99 E-value=2.8e-07 Score=93.21 Aligned_cols=224 Identities=8% Similarity=-0.017 Sum_probs=141.6
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
..+.+++|++++. .++++...++.|.++++.. . .....+........++++++.++.++++-..
T Consensus 36 ~~~~gi~~d~~~~-------~ly~~d~~~~~I~~~~~~g------~---~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~ 99 (267)
T 1npe_A 36 KVIIGLAFDCVDK-------VVYWTDISEPSIGRASLHG------G---EPTTIIRQDLGSPEGIALDHLGRTIFWTDSQ 99 (267)
T ss_dssp EEEEEEEEETTTT-------EEEEEETTTTEEEEEESSS------C---CCEEEECTTCCCEEEEEEETTTTEEEEEETT
T ss_pred CcEEEEEEecCCC-------EEEEEECCCCEEEEEecCC------C---CcEEEEECCCCCccEEEEEecCCeEEEEECC
Confidence 3567999998652 5666666778999999732 1 2222222223567899999844555566666
Q ss_pred CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC--CCcEEEEECCCCceeEEecCCCCCceeE
Q 046451 145 DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY--NGTTVVWDLKKQKPVISFSESIKRRCSV 222 (719)
Q Consensus 145 dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~--dg~I~iwd~~~~~~~~~~~~~~~~~i~~ 222 (719)
++.|.++|++.... ..+ ... .......+++++++++++++... .+.|..+++.... ...+..........
T Consensus 100 ~~~I~~~~~~g~~~-~~~--~~~----~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~g 171 (267)
T 1npe_A 100 LDRIEVAKMDGTQR-RVL--FDT----GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNG 171 (267)
T ss_dssp TTEEEEEETTSCSC-EEE--ECS----SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEE
T ss_pred CCEEEEEEcCCCCE-EEE--EEC----CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcE
Confidence 78999999875332 121 111 11357899999975555555443 4789889886433 23332123356789
Q ss_pred EEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEE
Q 046451 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSE 302 (719)
Q Consensus 223 l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~ 302 (719)
+++++++..++++....+ .|.++|+... .....+. .......+++. ++.++++...++.|.++|..+++.+.+
T Consensus 172 ia~d~~~~~lyv~d~~~~---~I~~~~~~g~-~~~~~~~-~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~ 244 (267)
T 1npe_A 172 LTFDAFSSQLCWVDAGTH---RAECLNPAQP-GRRKVLE-GLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDT 244 (267)
T ss_dssp EEEETTTTEEEEEETTTT---EEEEEETTEE-EEEEEEE-CCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEcCCCCEEEEEECCCC---EEEEEecCCC-ceEEEec-CCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEE
Confidence 999998766666666555 8999998643 2222222 22334566653 344444444668999999999999888
Q ss_pred ecCCC-CCeEEeEEcCCC
Q 046451 303 LPAGT-NWNFDIHWYPKI 319 (719)
Q Consensus 303 l~~h~-~~v~~l~~spdg 319 (719)
+.... ...+.+++.+++
T Consensus 245 i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 245 FHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp ECCSSCCCCCCEEEECSC
T ss_pred EccccccccceeeecCcc
Confidence 86543 246788888876
No 230
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.96 E-value=1.1e-07 Score=98.36 Aligned_cols=229 Identities=8% Similarity=-0.073 Sum_probs=140.9
Q ss_pred CccceEEEcCCCC-eEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 8 NRSASVAFAPDAP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 8 ~~V~~vafSpdg~-~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
.......|+++|+ +++++..++.| ..|+.+ +. ...+ ......++.++|+++| ++
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i----------~~~~~~-g~-~~~~-----~~~~~~~~gl~~d~dG--------~l 99 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRV----------LGWRED-GT-VDVL-----LDATAFTNGNAVDAQQ--------RL 99 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEE----------EEEETT-SC-EEEE-----EESCSCEEEEEECTTS--------CE
T ss_pred cCccCCeEeCCCCEEEEEECCCCEE----------EEEeCC-CC-EEEE-----eCCCCccceeeECCCC--------CE
Confidence 4456789999998 45555444444 566542 11 1111 1245668899999997 66
Q ss_pred EEEEcCCCcEEEEcCCccccCCCCCCCCceee---ecc-ccCCEEEEEEeCCCCCEEEE----EeC-------------C
Q 046451 87 VAGGLVDGSIDIWNPLSLISSGETGGNPLIAH---LSR-HKGPVRGLEFNSFTPNLLAS----GAD-------------D 145 (719)
Q Consensus 87 lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~---l~~-h~~~V~~l~fsp~~~~~las----gs~-------------d 145 (719)
+++...++.|.+|+.+ + ..... ..+ ....+.++++++ +++++++ |.. .
T Consensus 100 ~v~~~~~~~v~~~~~~-------g---~~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~ 168 (305)
T 3dr2_A 100 VHCEHGRRAITRSDAD-------G---QAHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAH 168 (305)
T ss_dssp EEEETTTTEEEEECTT-------S---CEEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSC
T ss_pred EEEECCCCEEEEECCC-------C---CEEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCC
Confidence 6666666889999972 2 21111 111 123567899998 7787776 332 2
Q ss_pred CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC------CcEEEEECCCCce--eEEecCCCC
Q 046451 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN------GTTVVWDLKKQKP--VISFSESIK 217 (719)
Q Consensus 146 g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d------g~I~iwd~~~~~~--~~~~~~~~~ 217 (719)
+.|+.||..+++.... . .......++|++++. .|+.+... +.|++||+..+.. ...+.....
T Consensus 169 ~~v~~~d~~~g~~~~~---~------~~~~p~gl~~spdg~-~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~ 238 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRM---A------DLDHPNGLAFSPDEQ-TLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD 238 (305)
T ss_dssp EEEEEECSSSCCCEEE---E------EESSEEEEEECTTSS-EEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSS
T ss_pred CeEEEEcCCCCcEEEE---e------cCCCCcceEEcCCCC-EEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCC
Confidence 5677777765543221 1 112567899999985 55555544 7899999876541 111211234
Q ss_pred CceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEE
Q 046451 218 RRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293 (719)
Q Consensus 218 ~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd 293 (719)
.....++++++|. + .++..+ .|.+||.. .+.+..+..+. .+.+++|++ +++.|+.++.++ +..++
T Consensus 239 ~~pdgi~~d~~G~-l-wv~~~~----gv~~~~~~--g~~~~~~~~~~-~~~~~~f~~-d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 239 GLPDGFCVDRGGW-L-WSSSGT----GVCVFDSD--GQLLGHIPTPG-TASNCTFDQ-AQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp SCCCSEEECTTSC-E-EECCSS----EEEEECTT--SCEEEEEECSS-CCCEEEECT-TSCEEEEEETTE-EEEEE
T ss_pred CCCCeEEECCCCC-E-EEecCC----cEEEECCC--CCEEEEEECCC-ceeEEEEeC-CCCEEEEEcCCe-EEEEE
Confidence 4567899999985 4 444444 49999984 34556665554 689999997 788888777654 43333
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.95 E-value=5.2e-08 Score=112.61 Aligned_cols=197 Identities=16% Similarity=0.159 Sum_probs=122.0
Q ss_pred EEEEeCCCCCEEEEEeCCCc-------------------EEEEcCCCCCCCCccCCccCCC--CCCCCCeEEEEecCCCC
Q 046451 128 GLEFNSFTPNLLASGADDGE-------------------ICIWDLSAPAEPSHFPPLRGNG--SAAQGEISFVSWNSKVQ 186 (719)
Q Consensus 128 ~l~fsp~~~~~lasgs~dg~-------------------I~iwdl~~~~~~~~~~~l~~~~--~~h~~~I~~l~~sp~g~ 186 (719)
.+++++ +.++|+.++.++. |..||..+++....+....... ......+.......+|.
T Consensus 239 ~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 239 SFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp CEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCc
Confidence 577888 6678888887763 9999999998765532110000 00111222222222331
Q ss_pred --cEEEEEeCCCcEEEEECCCCceeEEecCCCCC--------------------------------------ceeEEEEC
Q 046451 187 --HILASTSYNGTTVVWDLKKQKPVISFSESIKR--------------------------------------RCSVLQWN 226 (719)
Q Consensus 187 --~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~--------------------------------------~i~~l~~s 226 (719)
..++.++.+|.++++|.++++.+......... .-..++|+
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~d 397 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYN 397 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceEC
Confidence 36888999999999999999987544321100 01126788
Q ss_pred CCCCcEEEEEeCC-----------------------C-------------------CCCcEEEEecCCCCCceEEeeCCC
Q 046451 227 PDVATQLVVASDE-----------------------D-------------------SSPALRLWDMRNTMSPVKEFVGHT 264 (719)
Q Consensus 227 p~g~~~l~~~s~d-----------------------~-------------------~~~~I~lwDl~~~~~~~~~~~~h~ 264 (719)
|+.. ++++...+ + ..+.|+.||++++ +.+-.+..+.
T Consensus 398 p~~~-~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG-~~~W~~~~~~ 475 (689)
T 1yiq_A 398 PDTG-LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ-QAAWEVPYVT 475 (689)
T ss_dssp TTTT-EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT-EEEEEEEESS
T ss_pred CCCC-EEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC-CeEeEccCCC
Confidence 8865 44443221 0 0147999999876 4444444333
Q ss_pred CCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCC-eEEeEEcCCCCCEEEEEeCC
Q 046451 265 KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNW-NFDIHWYPKIPGVISASSFD 329 (719)
Q Consensus 265 ~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~-v~~l~~spdg~~~las~s~D 329 (719)
.+..-.+.. .+.++++++.||.|++||.++|+.+.+++..... ..-+.|..+|+.++++.+..
T Consensus 476 -~~~~g~~~t-agglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~G~ 539 (689)
T 1yiq_A 476 -IFNGGTLST-AGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFMAGW 539 (689)
T ss_dssp -SCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECC
T ss_pred -CccCccceE-CCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEEecC
Confidence 223334444 6678999999999999999999999988755432 24467778886666665543
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.94 E-value=6.2e-08 Score=111.76 Aligned_cols=196 Identities=14% Similarity=0.185 Sum_probs=122.2
Q ss_pred EEEEEeCCCCCEEEEEeCCC-------------------cEEEEcCCCCCCCCccCCccCCC--CCCCCCeEEEEecCCC
Q 046451 127 RGLEFNSFTPNLLASGADDG-------------------EICIWDLSAPAEPSHFPPLRGNG--SAAQGEISFVSWNSKV 185 (719)
Q Consensus 127 ~~l~fsp~~~~~lasgs~dg-------------------~I~iwdl~~~~~~~~~~~l~~~~--~~h~~~I~~l~~sp~g 185 (719)
..+++++ +.++|+.++.++ .|..+|..+++....+....... .........+....+|
T Consensus 246 ~~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG 324 (677)
T 1kb0_A 246 DSMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAG 324 (677)
T ss_dssp SCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETT
T ss_pred cceeEcC-CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCC
Confidence 3577888 667888777664 49999999988765532111000 0001122223333354
Q ss_pred C--cEEEEEeCCCcEEEEECCCCceeEEecCCCCC----------ce------------------------eEEEECCCC
Q 046451 186 Q--HILASTSYNGTTVVWDLKKQKPVISFSESIKR----------RC------------------------SVLQWNPDV 229 (719)
Q Consensus 186 ~--~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~----------~i------------------------~~l~~sp~g 229 (719)
. ..|+.++.+|.|+++|.++++.+..+...... .+ ..++|++++
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~ 404 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT 404 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC
Confidence 2 57889999999999999999988766522111 01 146788887
Q ss_pred CcEEEEEeCC-------------C---------------------------CCCcEEEEecCCCCCceEEeeCCCCCeeE
Q 046451 230 ATQLVVASDE-------------D---------------------------SSPALRLWDMRNTMSPVKEFVGHTKGVIA 269 (719)
Q Consensus 230 ~~~l~~~s~d-------------~---------------------------~~~~I~lwDl~~~~~~~~~~~~h~~~V~~ 269 (719)
. ++++...+ + ..+.|..||++++ +.+-.+. +...+..
T Consensus 405 ~-~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG-~~~W~~~-~~~~~~~ 481 (677)
T 1kb0_A 405 G-LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ-KAAWSVE-HVSPWNG 481 (677)
T ss_dssp T-EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT-EEEEEEE-ESSSCCC
T ss_pred C-EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC-cEEeecC-CCCCCcC
Confidence 5 44443221 0 0147999999876 3333333 2233444
Q ss_pred EEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC-CCeEEeEEcCCCCCEEEEEe
Q 046451 270 MSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT-NWNFDIHWYPKIPGVISASS 327 (719)
Q Consensus 270 v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~-~~v~~l~~spdg~~~las~s 327 (719)
..+.. ++.++++++.||.+++||.++|+.+.++.... ....-+.|..+|+.+++..+
T Consensus 482 g~~~~-~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~ 539 (677)
T 1kb0_A 482 GTLTT-AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAV 539 (677)
T ss_dssp CEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred cceEe-CCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEec
Confidence 44555 66788889999999999999999999987543 23344667788855555533
No 233
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.93 E-value=1.3e-07 Score=100.94 Aligned_cols=222 Identities=10% Similarity=0.049 Sum_probs=134.8
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCE-----EEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPV-----RGLEFNSFTPNLLASGADDGEICIWDLSAPAEP 159 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V-----~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~ 159 (719)
+.|+.++.++.|..+|. .++ +.+..+....... ...... +..++.++.++.|..+|..+++..
T Consensus 144 ~~v~v~~~~g~l~~~d~------~tG---~~~W~~~~~~~~~~~~~~~~~~~~---~~~v~~g~~~g~l~~~d~~tG~~~ 211 (376)
T 3q7m_A 144 GLVLIHTSNGQLQALNE------ADG---AVKWTVNLDMPSLSLRGESAPTTA---FGAAVVGGDNGRVSAVLMEQGQMI 211 (376)
T ss_dssp TEEEEECTTSEEEEEET------TTC---CEEEEEECCC-----CCCCCCEEE---TTEEEECCTTTEEEEEETTTCCEE
T ss_pred CEEEEEcCCCeEEEEEC------CCC---cEEEEEeCCCCceeecCCCCcEEE---CCEEEEEcCCCEEEEEECCCCcEE
Confidence 47888888999999998 455 5555544322111 222232 356788888999999999888765
Q ss_pred CccCCccCCCCCCCCC---e-EEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEE
Q 046451 160 SHFPPLRGNGSAAQGE---I-SFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVV 235 (719)
Q Consensus 160 ~~~~~l~~~~~~h~~~---I-~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~ 235 (719)
..+............. + ....+. + ..++.++.++.|..+|.++++.+..... .....+... + ..+++
T Consensus 212 w~~~~~~~~~~~~~~~~~~~~~~p~~~-~--~~v~~~~~~g~l~~~d~~tG~~~w~~~~---~~~~~~~~~--~-~~l~~ 282 (376)
T 3q7m_A 212 WQQRISQATGSTEIDRLSDVDTTPVVV-N--GVVFALAYNGNLTALDLRSGQIMWKREL---GSVNDFIVD--G-NRIYL 282 (376)
T ss_dssp EEEECCC-----------CCCCCCEEE-T--TEEEEECTTSCEEEEETTTCCEEEEECC---CCEEEEEEE--T-TEEEE
T ss_pred EEEecccCCCCcccccccccCCCcEEE-C--CEEEEEecCcEEEEEECCCCcEEeeccC---CCCCCceEE--C-CEEEE
Confidence 3321000000000000 0 011111 2 3677788899999999999998877652 224444444 3 24666
Q ss_pred EeCCCCCCcEEEEecCCCCCceEEee-CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeE
Q 046451 236 ASDEDSSPALRLWDMRNTMSPVKEFV-GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIH 314 (719)
Q Consensus 236 ~s~d~~~~~I~lwDl~~~~~~~~~~~-~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~ 314 (719)
++.++ .|..+|.+++ +.+-... .....+..... .+..|++++.+|.|.+||..+|+.+..+......+....
T Consensus 283 ~~~~g---~l~~~d~~tG-~~~w~~~~~~~~~~~~~~~---~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~ 355 (376)
T 3q7m_A 283 VDQND---RVMALTIDGG-VTLWTQSDLLHRLLTSPVL---YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEP 355 (376)
T ss_dssp EETTC---CEEEEETTTC-CEEEEECTTTTSCCCCCEE---ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCC
T ss_pred EcCCC---eEEEEECCCC-cEEEeecccCCCcccCCEE---ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCC
Confidence 66666 7999999876 3333333 12222333333 246788899999999999999999888766433333222
Q ss_pred EcCCCCCEEEEEeCCCcEEEEe
Q 046451 315 WYPKIPGVISASSFDGKIGIYN 336 (719)
Q Consensus 315 ~spdg~~~las~s~Dg~I~iwd 336 (719)
...+ ..|+.++.||.|+.|+
T Consensus 356 ~~~~--~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 356 VAAD--GKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEET--TEEEEEBTTSCEEEEE
T ss_pred EEEC--CEEEEEeCCCEEEEEe
Confidence 2223 3677788899999987
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.91 E-value=1.1e-06 Score=88.85 Aligned_cols=239 Identities=12% Similarity=0.048 Sum_probs=145.8
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|+.+.. +.|+.++++.... ... .....+......+.+++|++.++.++++-..++.|.++|+...... .+ .
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~-~~~---~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~--~ 74 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTM-KKT---EAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT-TI--I 74 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCB-CGG---GCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-EE--E
T ss_pred EEEEEcC-CeEEEEEecCccc-ccc---cceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE-EE--E
Confidence 4444443 4788888742110 000 0011222223457899999844555666666789999998765432 21 1
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
.. .......+++++++++++++...++.|.++|+.......... ........+++++++.+++++.... ..+.|
T Consensus 75 ~~----~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~~~~~P~~i~vd~~~g~lyv~~~~~-~~~~I 148 (267)
T 1npe_A 75 RQ----DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD-TGLVNPRGIVTDPVRGNLYWTDWNR-DNPKI 148 (267)
T ss_dssp CT----TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SSCSSEEEEEEETTTTEEEEEECCS-SSCEE
T ss_pred EC----CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEE-CCCCCccEEEEeeCCCEEEEEECCC-CCcEE
Confidence 11 123678999998765666666678899999987543322222 2235678999999765555555431 11378
Q ss_pred EEEecCCCCCceEEee-CCCCCeeEEEeCCCCCCeE-EEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEE
Q 046451 246 RLWDMRNTMSPVKEFV-GHTKGVIAMSWCPNDSSYL-LTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVI 323 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~-~h~~~V~~v~~sp~d~~~l-~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~l 323 (719)
..+++.... ...+. ........++|++ ++..| ++....+.|.++|.........+.. ......+++. ++ .++
T Consensus 149 ~~~~~dg~~--~~~~~~~~~~~P~gia~d~-~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~-~ly 222 (267)
T 1npe_A 149 ETSHMDGTN--RRILAQDNLGLPNGLTFDA-FSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GK-NLY 222 (267)
T ss_dssp EEEETTSCC--CEEEECTTCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TT-EEE
T ss_pred EEEecCCCC--cEEEEECCCCCCcEEEEcC-CCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CC-EEE
Confidence 888875432 22222 2334678899998 55544 5555678999999975544333333 3345677765 33 566
Q ss_pred EEEeCCCcEEEEeCCCCcccc
Q 046451 324 SASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 324 as~s~Dg~I~iwd~~~~~~~~ 344 (719)
++...++.|.++|..+++...
T Consensus 223 va~~~~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 223 YTDWKTNSVIAMDLAISKEMD 243 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEE
T ss_pred EEECCCCeEEEEeCCCCCceE
Confidence 666667899999999887655
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.88 E-value=7.6e-10 Score=118.21 Aligned_cols=223 Identities=13% Similarity=0.042 Sum_probs=120.5
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
++|++++.||.|+.||. .++ +.+..+.. +.+.+..+.. ++.++++++.||.|+.||..+++....+.
T Consensus 10 ~~v~~gs~dg~v~a~d~------~tG---~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~- 76 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSK------RTG---SIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLP- 76 (369)
T ss_dssp TEEEEEETTSEEEEEET------TTC---CEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECS-
T ss_pred CEEEEEcCCCEEEEEEC------CCC---CEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeee-
Confidence 68999999999999998 566 66766665 4555555555 56678888899999999998887654321
Q ss_pred ccCCCCCCCCCeE-EEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC
Q 046451 165 LRGNGSAAQGEIS-FVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP 243 (719)
Q Consensus 165 l~~~~~~h~~~I~-~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~ 243 (719)
... ...+. +..+..+ ..|++++.|+.|+.||.++++.+..+.. +. ...+++++ ..+++++.++
T Consensus 77 ~~~-----~~~~~~sp~~~~~--~~v~~g~~dg~v~a~D~~tG~~~w~~~~-~~----~~~~~p~~-~~v~~~~~dg--- 140 (369)
T 2hz6_A 77 FTI-----PELVQASPCRSSD--GILYMGKKQDIWYVIDLLTGEKQQTLSS-AF----ADSLSPST-SLLYLGRTEY--- 140 (369)
T ss_dssp CCH-----HHHHTTCSCC-------CCCCEEEEEEEEECCC----------------------------EEEEEEEE---
T ss_pred ccC-----ccccccCceEecC--CEEEEEeCCCEEEEEECCCCcEEEEecC-CC----cccccccC-CEEEEEecCC---
Confidence 000 00000 0011122 3677788899999999999998887762 22 23455665 4566777776
Q ss_pred cEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCC---CeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCC
Q 046451 244 ALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDS---SYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIP 320 (719)
Q Consensus 244 ~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~---~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~ 320 (719)
.|+.||.+++.. +-.+..+. .....++. +. ..+++++.||.|+.||..+|+.+.++......+....++.++
T Consensus 141 ~v~a~d~~tG~~-~W~~~~~~--~~~~~~~~-~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg- 215 (369)
T 2hz6_A 141 TITMYDTKTREL-RWNATYFD--YAASLPED-DVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREG- 215 (369)
T ss_dssp EEECCCSSSSSC-CCEEEEEE--ECCBCCCC-CTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSS-
T ss_pred EEEEEECCCCCE-EEeEeccc--ccCccccC-CccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCc-
Confidence 899999987643 33332111 12233333 22 567788999999999999999988876444333334555665
Q ss_pred CEEEE--EeCCCcEEEEeCCCCc
Q 046451 321 GVISA--SSFDGKIGIYNIEGCS 341 (719)
Q Consensus 321 ~~las--~s~Dg~I~iwd~~~~~ 341 (719)
.+.+. ...++.++.+|..+++
T Consensus 216 ~~~v~~~~~~~~~l~~ld~~tG~ 238 (369)
T 2hz6_A 216 LRKVMHINVAVETLRYLTFMSGE 238 (369)
T ss_dssp CEEECCEEEEHHHHHHHHHHHHH
T ss_pred eEeccceeecccceeeeehhcCC
Confidence 32210 0114567777776665
No 236
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.87 E-value=4.7e-07 Score=94.35 Aligned_cols=243 Identities=11% Similarity=0.075 Sum_probs=149.8
Q ss_pred CceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec--------------------cccCC
Q 046451 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS--------------------RHKGP 125 (719)
Q Consensus 66 ~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~--------------------~h~~~ 125 (719)
...+++|.+++ ++++++..++.|..|+... + .+..+. .....
T Consensus 20 ~p~~i~~d~~g--------~~l~v~~~~~~i~~~~~~~------~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (322)
T 2fp8_A 20 APNSFTFDSTN--------KGFYTSVQDGRVIKYEGPN------S----GFVDFAYASPYWNKAFCENSTDAEKRPLCGR 81 (322)
T ss_dssp CCCCEECCTTC--------SSEEEECTTSEEEEECCTT------T----CEEEEEESCTTCCHHHHTTCCCGGGHHHHCC
T ss_pred CceEEEEcCCC--------CEEEEEcCCCeEEEECCCC------C----ceEEEecccccccccccccccchhccccCCC
Confidence 34678898887 6788888899999998732 1 121111 11235
Q ss_pred EEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecC-CCCcEEEEEeC----------
Q 046451 126 VRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNS-KVQHILASTSY---------- 194 (719)
Q Consensus 126 V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp-~g~~~l~s~s~---------- 194 (719)
+.++++.+.+ ..|+.+...+.|.++|..++.. ..+.... ..........+++.+ +| +++++...
T Consensus 82 p~gi~~~~~~-g~l~v~d~~~~i~~~d~~~g~~-~~~~~~~--~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 82 TYDISYNLQN-NQLYIVDCYYHLSVVGSEGGHA-TQLATSV--DGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp EEEEEEETTT-TEEEEEETTTEEEEECTTCEEC-EEEESEE--TTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHH
T ss_pred CceEEEcCCC-CcEEEEECCCCEEEEeCCCCEE-EEecccC--CCCcccccceEEEecCCC-EEEEECCcccccccccce
Confidence 7889998623 4566665556688888765432 1110000 000112578899999 87 45555432
Q ss_pred -------CCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC-ceEEeeCCCCC
Q 046451 195 -------NGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS-PVKEFVGHTKG 266 (719)
Q Consensus 195 -------dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~-~~~~~~~h~~~ 266 (719)
++.|..||..+++...... .......|+|+++++.++++-...+ .|.+||+..... ....+....+
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~~~~~~~--~~~~p~gia~~~dg~~lyv~d~~~~---~I~~~~~~~~~~~~~~~~~~~~g- 230 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKETTLLLK--ELHVPGGAEVSADSSFVLVAEFLSH---QIVKYWLEGPKKGTAEVLVKIPN- 230 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTEEEEEEE--EESCCCEEEECTTSSEEEEEEGGGT---EEEEEESSSTTTTCEEEEEECSS-
T ss_pred ehcccCCCceEEEEeCCCCEEEEecc--CCccCcceEECCCCCEEEEEeCCCC---eEEEEECCCCcCCccceEEeCCC-
Confidence 3678999987765433222 2244567999999865555555555 799999874211 1222221223
Q ss_pred eeEEEeCCCCCCeEEEEeC----------CCcEEEEECCCCeEEEEecCC----CCCeEEeEEcCCCCCEEEEEeCCCcE
Q 046451 267 VIAMSWCPNDSSYLLTCAK----------DNRTICWDTVSGEIVSELPAG----TNWNFDIHWYPKIPGVISASSFDGKI 332 (719)
Q Consensus 267 V~~v~~sp~d~~~l~sgs~----------Dg~I~iwd~~~~~~~~~l~~h----~~~v~~l~~spdg~~~las~s~Dg~I 332 (719)
...+++.+ +++++++... .+.|.++|. .++.+..+... ...++++++. ++ .++++...++.|
T Consensus 231 P~gi~~d~-~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~~-~g-~L~v~~~~~~~i 306 (322)
T 2fp8_A 231 PGNIKRNA-DGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQEH-DG-LLYIGTLFHGSV 306 (322)
T ss_dssp EEEEEECT-TSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEEE-TT-EEEEECSSCSEE
T ss_pred CCCeEECC-CCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEEe-CC-EEEEeecCCCce
Confidence 77899998 7776666544 467889987 57777776543 2457777774 44 677777778899
Q ss_pred EEEeCCCCc
Q 046451 333 GIYNIEGCS 341 (719)
Q Consensus 333 ~iwd~~~~~ 341 (719)
.++++....
T Consensus 307 ~~~~~~~~~ 315 (322)
T 2fp8_A 307 GILVYDKKG 315 (322)
T ss_dssp EEEEC----
T ss_pred EEEeccccc
Confidence 999987543
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.84 E-value=1.7e-07 Score=97.51 Aligned_cols=226 Identities=13% Similarity=0.056 Sum_probs=141.3
Q ss_pred CceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC
Q 046451 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD 145 (719)
Q Consensus 66 ~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d 145 (719)
.+.++....++ .|..++.+ |..||.. + ..+..+...........+. +..|..++.+
T Consensus 61 ~~~~~~~~~~g---------~l~v~t~~--l~~~d~~-------g---~~~~~~~~~~~~~~~~~~~---~~~l~v~t~~ 116 (330)
T 3hxj_A 61 IECRPSIGKDG---------TIYFGSDK--VYAINPD-------G---TEKWRFDTKKAIVSDFTIF---EDILYVTSMD 116 (330)
T ss_dssp EEECCEETTTT---------EECCSSCE--EEEECCC-------G---GGGGGSCC-----CCEEEE---TTEEEEECTT
T ss_pred cccceEEecCC---------cEEEecCc--EEEECCC-------C---cEEEEEECCCCcccCceEE---CCEEEEEecC
Confidence 34566666664 56666655 8888752 1 2222222222223333343 4567788889
Q ss_pred CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEE
Q 046451 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQW 225 (719)
Q Consensus 146 g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~ 225 (719)
+.|..+|.. ++....+ .. ....+.++....++ .|+.++.++.|..||.. ++.+..+. .....+.++.+
T Consensus 117 ~~l~~~d~~-g~~~~~~---~~----~~~~~~~~~~~~~g--~l~vgt~~~~l~~~d~~-g~~~~~~~-~~~~~~~~~~~ 184 (330)
T 3hxj_A 117 GHLYAINTD-GTEKWRF---KT----KKAIYATPIVSEDG--TIYVGSNDNYLYAINPD-GTEKWRFK-TNDAITSAASI 184 (330)
T ss_dssp SEEEEECTT-SCEEEEE---EC----SSCCCSCCEECTTS--CEEEECTTSEEEEECTT-SCEEEEEE-CSSCCCSCCEE
T ss_pred CEEEEEcCC-CCEEEEE---cC----CCceeeeeEEcCCC--EEEEEcCCCEEEEECCC-CCEeEEEe-cCCCceeeeEE
Confidence 999999987 5433221 11 12245556666665 36667888999999998 77776666 34556777888
Q ss_pred CCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC
Q 046451 226 NPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA 305 (719)
Q Consensus 226 sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~ 305 (719)
..++. +.+++ . .|..|| .++ +.+..+......+.++.+.. ++ .|..++.++.|..+|. +++.+..+..
T Consensus 185 d~~g~--l~v~t-~----~l~~~d-~~g-~~~~~~~~~~~~~~~~~~~~-~g-~l~v~t~~~gl~~~~~-~g~~~~~~~~ 252 (330)
T 3hxj_A 185 GKDGT--IYFGS-D----KVYAIN-PDG-TEKWNFYAGYWTVTRPAISE-DG-TIYVTSLDGHLYAINP-DGTEKWRFKT 252 (330)
T ss_dssp CTTCC--EEEES-S----SEEEEC-TTS-CEEEEECCSSCCCSCCEECT-TS-CEEEEETTTEEEEECT-TSCEEEEEEC
T ss_pred cCCCE--EEEEe-C----EEEEEC-CCC-cEEEEEccCCcceeceEECC-CC-eEEEEcCCCeEEEECC-CCCEeEEeeC
Confidence 77763 44444 3 599999 544 44444544556677888876 54 5666778888999985 6666666665
Q ss_pred CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 306 GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 306 h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
....+..+.+..++ .|..++.+|.|..+|. +++.
T Consensus 253 ~~~~~~~~~~~~~g--~l~v~t~~ggl~~~d~-~g~~ 286 (330)
T 3hxj_A 253 GKRIESSPVIGNTD--TIYFGSYDGHLYAINP-DGTE 286 (330)
T ss_dssp SSCCCSCCEECTTS--CEEEECTTCEEEEECT-TSCE
T ss_pred CCCccccceEcCCC--eEEEecCCCCEEEECC-CCcE
Confidence 55545566776666 4666777888999996 4443
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.82 E-value=3.7e-07 Score=94.91 Aligned_cols=219 Identities=11% Similarity=-0.031 Sum_probs=145.0
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
+.|..++.++.|..+|. . + ........+...+.++.... ++ .|..++.++.|..||.. ++....+
T Consensus 108 ~~l~v~t~~~~l~~~d~------~-g---~~~~~~~~~~~~~~~~~~~~-~g-~l~vgt~~~~l~~~d~~-g~~~~~~-- 172 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINT------D-G---TEKWRFKTKKAIYATPIVSE-DG-TIYVGSNDNYLYAINPD-GTEKWRF-- 172 (330)
T ss_dssp TEEEEECTTSEEEEECT------T-S---CEEEEEECSSCCCSCCEECT-TS-CEEEECTTSEEEEECTT-SCEEEEE--
T ss_pred CEEEEEecCCEEEEEcC------C-C---CEEEEEcCCCceeeeeEEcC-CC-EEEEEcCCCEEEEECCC-CCEeEEE--
Confidence 47888888999999997 3 3 44444444555566676655 44 46678888999999988 5443222
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
.. ....+.++.+..++ . |..++ +.|..|| .+++.+..+. .....+.++..+.+|. +.+++.++ .
T Consensus 173 -~~----~~~~~~~~~~d~~g-~-l~v~t--~~l~~~d-~~g~~~~~~~-~~~~~~~~~~~~~~g~--l~v~t~~~---g 236 (330)
T 3hxj_A 173 -KT----NDAITSAASIGKDG-T-IYFGS--DKVYAIN-PDGTEKWNFY-AGYWTVTRPAISEDGT--IYVTSLDG---H 236 (330)
T ss_dssp -EC----SSCCCSCCEECTTC-C-EEEES--SSEEEEC-TTSCEEEEEC-CSSCCCSCCEECTTSC--EEEEETTT---E
T ss_pred -ec----CCCceeeeEEcCCC-E-EEEEe--CEEEEEC-CCCcEEEEEc-cCCcceeceEECCCCe--EEEEcCCC---e
Confidence 11 12345667776675 3 44445 7899999 7777776666 4456688888888873 55566555 5
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEE
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~la 324 (719)
|..+|. ++ ..+..+......+.++.+.. +..|..++.+|.|..+|. +++.+..+......+.++....++ .|.
T Consensus 237 l~~~~~-~g-~~~~~~~~~~~~~~~~~~~~--~g~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g--~l~ 309 (330)
T 3hxj_A 237 LYAINP-DG-TEKWRFKTGKRIESSPVIGN--TDTIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENG--TIY 309 (330)
T ss_dssp EEEECT-TS-CEEEEEECSSCCCSCCEECT--TSCEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTC--CEE
T ss_pred EEEECC-CC-CEeEEeeCCCCccccceEcC--CCeEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCC--EEE
Confidence 888874 32 44444544444444555553 346777888989999996 788777776666667788887887 355
Q ss_pred EEeCCCcEEEEeCCCCc
Q 046451 325 ASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 325 s~s~Dg~I~iwd~~~~~ 341 (719)
.++.+|.+++...+..+
T Consensus 310 ~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 310 FGTRNGKFYALFNLEHH 326 (330)
T ss_dssp EECTTSCEEEEEC----
T ss_pred EEcCCCeEEEEeccccc
Confidence 57789999998876544
No 239
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.79 E-value=2.2e-09 Score=114.58 Aligned_cols=200 Identities=12% Similarity=0.043 Sum_probs=106.9
Q ss_pred cEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCC
Q 046451 187 HILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKG 266 (719)
Q Consensus 187 ~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~ 266 (719)
.++++++.||.|+.||..+++.+.++.. ..+.+..+..++ .++++++.++ .|+.||.+++. .+..+..+...
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g-~~~v~~s~dg---~l~a~d~~tG~-~~w~~~~~~~~ 81 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHVEE-PAFLPDPNDG---SLYTLGSKNNE-GLTKLPFTIPE 81 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC---CCSCCCC------CCEEECTTTC---CEEEC-----C-CSEECSCCHHH
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecC---CCceecceEcCC-CEEEEeCCCC---EEEEEECCCCc-eeeeeeccCcc
Confidence 4788999999999999999999988872 445555555565 4566666776 89999997763 33333322111
Q ss_pred -ee-EEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 267 -VI-AMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 267 -V~-~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+. +..+. ++..|++++.|+.|+.||..+|+.+..+..+.. ..+++++ ..|++++.|+.|+.||..+++..-
T Consensus 82 ~~~~sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p~~-~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 82 LVQASPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSPST-SLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp HHTTCSCC-------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred ccccCceEe--cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccccC-CEEEEEecCCEEEEEECCCCCEEE
Confidence 11 11111 345677888999999999999999888776542 3456666 678888889999999999987643
Q ss_pred cCCCCCCCCCccCcceec----CCCceeeeeCCcEEEEccCCCCCcccccccccccee-eccCCCCC
Q 046451 345 VGDSNFSAAPLRAPKWYK----RPAGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHG-VDQSKYGM 406 (719)
Q Consensus 345 ~~~~~~~~~~~~~p~w~~----~~~~~s~s~~Gklv~~~~~~~~~~~~~~~~~~~v~~-v~~s~~~~ 406 (719)
..+..- ...+.... ....+..+.+|.+++|+..++...|+.... +.++. ..++.||.
T Consensus 155 ~~~~~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 155 NATYFD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA-SPVVAFYVWQREGL 216 (369)
T ss_dssp EEEEEE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS-SCEEEEEECTTSSC
T ss_pred eEeccc----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC-CceEEEEEecCCce
Confidence 211000 01111111 022344567899999999888877776533 33333 45666664
No 240
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.79 E-value=5.1e-07 Score=96.29 Aligned_cols=233 Identities=9% Similarity=0.058 Sum_probs=139.4
Q ss_pred EEEc--CCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccC--------CCCCceeeeecCCCCCCCCC
Q 046451 13 VAFA--PDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESP--------SSERFNRLAWGKNGSGSEDF 82 (719)
Q Consensus 13 vafS--pdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~--------~~~~V~~l~~sp~g~~~~~~ 82 (719)
..|+ .++++|.+.+. .++.|.|+|+....... ++...++ ....-..+..+++|
T Consensus 87 ~~~~~~~~r~~l~v~~l---------~s~~I~viD~~t~p~~p--~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG------ 149 (462)
T 2ece_A 87 PNGKPNIERRFLIVPGL---------RSSRIYIIDTKPNPREP--KIIKVIEPEEVKKVSGYSRLHTVHCGPDA------ 149 (462)
T ss_dssp TTCCTTCCSCEEEEEBT---------TTCCEEEEECCSCTTSC--EEEEEECHHHHHHHHCEEEEEEEEECSSC------
T ss_pred cccCCCccCCEEEEccC---------CCCeEEEEECCCCCCCc--eeeeeechhhcccccCCCcccceeECCCe------
Confidence 3457 88888877643 34566888886543322 2222221 01123455677774
Q ss_pred ccceEEEEcCC------CcEEEEcCCccccCCCCCCCCceeeecccc---CCEEEEEEeCCCCCEEEEEe----------
Q 046451 83 SLGLVAGGLVD------GSIDIWNPLSLISSGETGGNPLIAHLSRHK---GPVRGLEFNSFTPNLLASGA---------- 143 (719)
Q Consensus 83 ~~~~lasgs~d------g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~---~~V~~l~fsp~~~~~lasgs---------- 143 (719)
+++++..+ |.|.++|. .+. +.+.++.... ..-..+.|++ +.+.+++..
T Consensus 150 ---i~Vs~~g~~~g~~~g~v~vlD~------~T~---~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g 216 (462)
T 2ece_A 150 ---IYISALGNEEGEGPGGILMLDH------YSF---EPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDG 216 (462)
T ss_dssp ---EEEEEEEETTSCSCCEEEEECT------TTC---CEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTC
T ss_pred ---EEEEcCCCcCCCCCCeEEEEEC------CCC---eEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccc
Confidence 55565554 78999998 444 5555554221 2234688899 778888774
Q ss_pred ---------CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEe--cCCCCcEEEEEe-----CCCcEEEEECCCCc
Q 046451 144 ---------DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW--NSKVQHILASTS-----YNGTTVVWDLKKQK 207 (719)
Q Consensus 144 ---------~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~--sp~g~~~l~s~s-----~dg~I~iwd~~~~~ 207 (719)
.+.+|.+||+.+.+....+ .... .......+.| ++++...++++- .+++|.+|..+.++
T Consensus 217 ~~~~~~~~~~~d~V~v~D~~~~k~~~tI---~vg~--~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~ 291 (462)
T 2ece_A 217 LKLEHLKDRYGNRIHFWDLRKRKRIHSL---TLGE--ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK 291 (462)
T ss_dssp CCTTTHHHHSCCEEEEEETTTTEEEEEE---ESCT--TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE
T ss_pred cchhhhhhccCCEEEEEECCCCcEeeEE---ecCC--CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc
Confidence 3689999999986544432 2110 1123445555 999865555555 67788887665442
Q ss_pred e--eEE--ecC----C-----------CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC--ceEEeeCCC--
Q 046451 208 P--VIS--FSE----S-----------IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS--PVKEFVGHT-- 264 (719)
Q Consensus 208 ~--~~~--~~~----~-----------~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~--~~~~~~~h~-- 264 (719)
. +.. +.. . .......|.+++||+.++++....+ .|.+||+..... .+..+....
T Consensus 292 ~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d---~VavfdV~d~~~~~lv~~I~tGG~~ 368 (462)
T 2ece_A 292 WNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIG---EVRQYDISNPFKPVLTGKVKLGGIF 368 (462)
T ss_dssp EEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTT---EEEEEECSSTTSCEEEEEEECBTTT
T ss_pred eeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCC---EEEEEEecCCCCcEEEEEEEeCCee
Confidence 1 111 110 0 0245788999999976666666555 899999864332 222222110
Q ss_pred ------------CCeeEEEeCCCCCCeEEEEe
Q 046451 265 ------------KGVIAMSWCPNDSSYLLTCA 284 (719)
Q Consensus 265 ------------~~V~~v~~sp~d~~~l~sgs 284 (719)
..-..+.+++ |+++|+++.
T Consensus 369 ~~~~~~~G~~~~ggPr~~~lSp-DGk~LyVaN 399 (462)
T 2ece_A 369 HRADHPAGHKLTGAPQMLEISR-DGRRVYVTN 399 (462)
T ss_dssp TCBCCTTSCCCCSCCCCEEECT-TSSEEEEEC
T ss_pred ccccccccccCCCCCCEEEEcC-CCCEEEEEc
Confidence 1347899999 888888876
No 241
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.77 E-value=2.6e-07 Score=92.60 Aligned_cols=198 Identities=8% Similarity=0.003 Sum_probs=137.3
Q ss_pred CEEEEEEeCCCCCEEEEEeC--CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEE
Q 046451 125 PVRGLEFNSFTPNLLASGAD--DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWD 202 (719)
Q Consensus 125 ~V~~l~fsp~~~~~lasgs~--dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd 202 (719)
....+.|++ ++.++++.+. ++.|+++|+.+++....+. +. .......+++. +.+++++.-.++.+.++|
T Consensus 22 f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~-l~-----~~~fgeGi~~~--g~~lyv~t~~~~~v~viD 92 (266)
T 2iwa_A 22 FTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHK-MD-----DSYFGEGLTLL--NEKLYQVVWLKNIGFIYD 92 (266)
T ss_dssp CEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEE-CC-----TTCCEEEEEEE--TTEEEEEETTCSEEEEEE
T ss_pred CcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEe-cC-----CCcceEEEEEe--CCEEEEEEecCCEEEEEE
Confidence 357999998 5554554443 6899999999988766532 11 11123355655 345666667789999999
Q ss_pred CCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCC-----CCeeEEEeCCCCC
Q 046451 203 LKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHT-----KGVIAMSWCPNDS 277 (719)
Q Consensus 203 ~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~-----~~V~~v~~sp~d~ 277 (719)
..+.+.+.++... ...- ..+++||+.++++. .++ .|.++|..+. +.+..+.-.. ..++.+.|. ++
T Consensus 93 ~~t~~v~~~i~~g-~~~g--~glt~Dg~~l~vs~-gs~---~l~viD~~t~-~v~~~I~Vg~~~~p~~~~nele~~--dg 162 (266)
T 2iwa_A 93 RRTLSNIKNFTHQ-MKDG--WGLATDGKILYGSD-GTS---ILYEIDPHTF-KLIKKHNVKYNGHRVIRLNELEYI--NG 162 (266)
T ss_dssp TTTTEEEEEEECC-SSSC--CEEEECSSSEEEEC-SSS---EEEEECTTTC-CEEEEEECEETTEECCCEEEEEEE--TT
T ss_pred CCCCcEEEEEECC-CCCe--EEEEECCCEEEEEC-CCC---eEEEEECCCC-cEEEEEEECCCCcccccceeEEEE--CC
Confidence 9999999988733 1222 33445776666554 344 8999999775 4455443211 246678887 45
Q ss_pred CeEEEEeCCCcEEEEECCCCeEEEEecCC-------------CCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 278 SYLLTCAKDNRTICWDTVSGEIVSELPAG-------------TNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 278 ~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h-------------~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
.+++....++.|.+.|..+++.+..+... ......|+|++++..+++++...++|.+.++....
T Consensus 163 ~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 163 EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 55555556899999999999998888642 13468999999997888889888999999987753
No 242
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.73 E-value=1e-07 Score=105.15 Aligned_cols=232 Identities=14% Similarity=0.043 Sum_probs=149.2
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc-ccCCEEEEEE-e-CCCCCEEEEEe------------------
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR-HKGPVRGLEF-N-SFTPNLLASGA------------------ 143 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~-h~~~V~~l~f-s-p~~~~~lasgs------------------ 143 (719)
.++++...++.|.+.|+. +. ++...+.- .......+++ + | +++++++++
T Consensus 103 ~lfVnd~~~~rVavIdl~------t~---~~~~ii~ip~g~~phg~~~~~~p-~~~~v~~~~~~~~p~~~dg~~l~~~~~ 172 (595)
T 1fwx_A 103 FLFMNDKANTRVARVRCD------VM---KCDAILEIPNAKGIHGLRPQKWP-RSNYVFCNGEDETPLVNDGTNMEDVAN 172 (595)
T ss_dssp EEEEEETTTTEEEEEETT------TT---EEEEEEECSSCCSEEEEEECCSS-BCSEEEEEECSCEESSCSSSSTTCGGG
T ss_pred EEEEEcCCCCEEEEEECC------Cc---eEeeEEeCCCCCCCcceeeeecC-CCcEEEEecccccccCCCCcccccccc
Confidence 344444556779999994 33 44443322 2245788888 4 6 778887774
Q ss_pred CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC---------------------------
Q 046451 144 DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG--------------------------- 196 (719)
Q Consensus 144 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg--------------------------- 196 (719)
.++.|.++|..+.+....+. -+ +.-..++++++|. ++++++.+.
T Consensus 173 ~~~~vtvID~~t~~v~~qI~--Vg------g~pd~~~~spdGk-~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~ 243 (595)
T 1fwx_A 173 YVNVFTAVDADKWEVAWQVL--VS------GNLDNCDADYEGK-WAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK 243 (595)
T ss_dssp EEEEEEEEETTTTEEEEEEE--ES------SCCCCEEECSSSS-EEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH
T ss_pred cCceEEEEECCCCeEEEEEE--eC------CCccceEECCCCC-EEEEEecCcccCcchhhccccccceEEEeeccceeE
Confidence 24578899998766544431 11 1234567888874 555555432
Q ss_pred -----------cEEEEECCC--Cce-eEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC--------
Q 046451 197 -----------TTVVWDLKK--QKP-VISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM-------- 254 (719)
Q Consensus 197 -----------~I~iwd~~~--~~~-~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~-------- 254 (719)
.|.+.|.++ ++. +..+. ......++.++|||+++++++..++ +|.++|+.+..
T Consensus 244 ~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip--vg~~PhGv~~sPDGk~v~V~~~~s~---~VsVid~~~~~~~~~~~l~ 318 (595)
T 1fwx_A 244 AIAAGDYQELNGVKVVDGRKEASSLFTRYIP--IANNPHGCNMAPDKKHLCVAGKLSP---TVTVLDVTRFDAVFYENAD 318 (595)
T ss_dssp HHHHTCSEEETTEEEEECSGGGCCSSEEEEE--EESSCCCEEECTTSSEEEEECTTSS---BEEEEEGGGHHHHHHSCCC
T ss_pred eccCCCeeEECcEEEEeCcccCCceeEEEEe--cCCCceEEEEcCCCCEEEEeCCCCC---eEEEEECcccccccccccC
Confidence 477778777 444 44554 4456788999999987777776666 99999997531
Q ss_pred ---CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCC----------CeEEEEecCCCCC-----eEEeEEc
Q 046451 255 ---SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVS----------GEIVSELPAGTNW-----NFDIHWY 316 (719)
Q Consensus 255 ---~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~----------~~~~~~l~~h~~~-----v~~l~~s 316 (719)
..+.++ .-..+...++|++ +|...++...|++|.+||+.+ .+.+.++..|-.. -.++.++
T Consensus 319 ~~~~v~~~v-~vG~gP~h~aF~~-dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~ 396 (595)
T 1fwx_A 319 PRSAVVAEP-ELGLGPLHTAFDG-RGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLD 396 (595)
T ss_dssp GGGGEEECC-BCCSCEEEEEECT-TSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTT
T ss_pred cccceEEEc-CCCCCcceEEECC-CCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeC
Confidence 011222 2234678899999 775556677899999999977 5677777766441 1234668
Q ss_pred CCCCCEEEEEe-CC-CcE-----------EEEeCCCCccc
Q 046451 317 PKIPGVISASS-FD-GKI-----------GIYNIEGCSRY 343 (719)
Q Consensus 317 pdg~~~las~s-~D-g~I-----------~iwd~~~~~~~ 343 (719)
+|| ++|++.. .. .++ .++|+++++..
T Consensus 397 ~DG-k~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~ 435 (595)
T 1fwx_A 397 ATN-DWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMV 435 (595)
T ss_dssp CCS-SEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCE
T ss_pred CCC-CEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEE
Confidence 999 4555543 22 344 89999776643
No 243
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.70 E-value=8.9e-07 Score=101.93 Aligned_cols=269 Identities=13% Similarity=0.118 Sum_probs=157.5
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecccc----CCEEE-EEEeCCCCCEEEEEeC------CCcEEEEcC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHK----GPVRG-LEFNSFTPNLLASGAD------DGEICIWDL 153 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~----~~V~~-l~fsp~~~~~lasgs~------dg~I~iwdl 153 (719)
+.|+.++.|+.|..+|. .++ +.+..+.... ..+.+ ..+. + ..++++.. +|.|+.+|.
T Consensus 118 ~~v~v~~~dg~l~alD~------~tG---~~~W~~~~~~~~~~~~~~~~P~v~--~-~~v~vg~~~~~~~~~g~v~a~D~ 185 (668)
T 1kv9_A 118 DKVYVGTLDGRLIALDA------KTG---KAIWSQQTTDPAKPYSITGAPRVV--K-GKVIIGNGGAEYGVRGFVSAYDA 185 (668)
T ss_dssp TEEEEECTTSEEEEEET------TTC---CEEEEEECSCTTSSCBCCSCCEEE--T-TEEEECCBCTTTCCBCEEEEEET
T ss_pred CEEEEEcCCCEEEEEEC------CCC---CEeeeeccCCCCCcceecCCCEEE--C-CEEEEeCCCCCcCCCCEEEEEEC
Confidence 57888889999999998 556 6555554321 11111 1111 3 34555443 589999999
Q ss_pred CCCCCCCccCCccCCCC------------------------CCCCCeEEEEecCCCCcEEEEEeCCC-------------
Q 046451 154 SAPAEPSHFPPLRGNGS------------------------AAQGEISFVSWNSKVQHILASTSYNG------------- 196 (719)
Q Consensus 154 ~~~~~~~~~~~l~~~~~------------------------~h~~~I~~l~~sp~g~~~l~s~s~dg------------- 196 (719)
.+++.+..+........ ........+++++++ .+++.++.++
T Consensus 186 ~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~-~~vy~~~~~g~~w~~~~~~~~~g 264 (668)
T 1kv9_A 186 DTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPEL-DLLYVGTGNGSPWNREVRSPGGG 264 (668)
T ss_dssp TTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHSTTCC
T ss_pred CCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCC-CEEEEeCCCCCccccCCCCCCCC
Confidence 99887654321110000 001112246777775 4777777665
Q ss_pred ------cEEEEECCCCceeEEecCC-CC-------CceeEEEECCCCC--cEEEEEeCCCCCCcEEEEecCCCCCceEEe
Q 046451 197 ------TTVVWDLKKQKPVISFSES-IK-------RRCSVLQWNPDVA--TQLVVASDEDSSPALRLWDMRNTMSPVKEF 260 (719)
Q Consensus 197 ------~I~iwd~~~~~~~~~~~~~-~~-------~~i~~l~~sp~g~--~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~ 260 (719)
.|..+|.++++.+..+... +. .......+..+|+ ..++.+..++ .++++|.+++ +.+..+
T Consensus 265 d~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G---~l~~lD~~tG-~~l~~~ 340 (668)
T 1kv9_A 265 DNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNG---FFYVLDRTNG-KLISAE 340 (668)
T ss_dssp CCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTS---EEEEEETTTC-CEEEEE
T ss_pred CceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCC---EEEEEECCCC-CEeccc
Confidence 3999999999999888742 11 2222222233453 2577777776 8999998876 333221
Q ss_pred eCCC-----------C-------------------------CeeEEEeCCCCCCeEEEE---------------------
Q 046451 261 VGHT-----------K-------------------------GVIAMSWCPNDSSYLLTC--------------------- 283 (719)
Q Consensus 261 ~~h~-----------~-------------------------~V~~v~~sp~d~~~l~sg--------------------- 283 (719)
.... . .-..+++++ +..+++..
T Consensus 341 ~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~~~~~ 419 (668)
T 1kv9_A 341 KFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNP-GTGLVYIPYQEVPGVYRNEGKDFVTRKAF 419 (668)
T ss_dssp ESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEET-TTTEEEEEEEECCEEECCCGGGCCCCSSC
T ss_pred cccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECC-CCCEEEEeccccceEeeeecccccccccc
Confidence 1100 0 001256666 44444431
Q ss_pred ---------------eCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCC
Q 046451 284 ---------------AKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDS 348 (719)
Q Consensus 284 ---------------s~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~ 348 (719)
..+|.|..||+.+|+.+.++..+.. +....+...+ .+++.++.|+.|++||.++++.+...+.
T Consensus 420 ~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~~~~~t~g-g~vf~g~~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 420 NTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH-WNGGTLSTAG-NLVFQGTAAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp CCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS-CCCCEEEETT-TEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCC-CcCceeEeCC-CEEEEECCcccchhhhhhcChhheEecC
Confidence 1348899999999999888765443 3333444455 5888899999999999999988653322
Q ss_pred CCCCCCccCcceecCCCceeeeeCCcEEEEccCCC
Q 046451 349 NFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 349 ~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
.-.. .. .-+++..+|++.+.-..+.
T Consensus 498 ~~~~--~~--------~p~~~~~~G~~yva~~~G~ 522 (668)
T 1kv9_A 498 QSGI--VA--------APMTFELAGRQYVAIMAGW 522 (668)
T ss_dssp SSCC--CS--------CCEEEEETTEEEEEEEECC
T ss_pred CCCc--cc--------CceEEEECCEEEEEEEecC
Confidence 1110 01 2245678898655444443
No 244
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.68 E-value=6.3e-07 Score=98.84 Aligned_cols=236 Identities=11% Similarity=0.042 Sum_probs=150.6
Q ss_pred CCCEEEEEe-CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEe-c-CCCCcEEEEEe------------------
Q 046451 135 TPNLLASGA-DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW-N-SKVQHILASTS------------------ 193 (719)
Q Consensus 135 ~~~~lasgs-~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~-s-p~g~~~l~s~s------------------ 193 (719)
|+++|+... .+..|.+.|+.+.+....+. +. .......+++ + |+++ ++++++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~-ip-----~g~~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~l~~~~~ 172 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILE-IP-----NAKGIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTNMEDVAN 172 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEE-CS-----SCCSEEEEEECCSSBCS-EEEEEECSCEESSCSSSSTTCGGG
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEe-CC-----CCCCCcceeeeecCCCc-EEEEecccccccCCCCcccccccc
Confidence 345555544 56679999999987655321 11 1225778887 4 7875 555553
Q ss_pred CCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCC--------------------------------
Q 046451 194 YNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS-------------------------------- 241 (719)
Q Consensus 194 ~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~-------------------------------- 241 (719)
.++.+.++|..+.+.+.++.. ......++++++|++.++++...+.
T Consensus 173 ~~~~vtvID~~t~~v~~qI~V--gg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~ 250 (595)
T 1fwx_A 173 YVNVFTAVDADKWEVAWQVLV--SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDY 250 (595)
T ss_dssp EEEEEEEEETTTTEEEEEEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCS
T ss_pred cCceEEEEECCCCeEEEEEEe--CCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCe
Confidence 346899999999998888873 2356788999999755555544311
Q ss_pred --CCcEEEEecCC--CCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe-CCCcEEEEECCCCe------------EEEEec
Q 046451 242 --SPALRLWDMRN--TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA-KDNRTICWDTVSGE------------IVSELP 304 (719)
Q Consensus 242 --~~~I~lwDl~~--~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~~~~------------~~~~l~ 304 (719)
.+.|.+.|.++ ....+..+.. .....++.++| ||+++++++ .+++|.++|+.+.+ .+.++.
T Consensus 251 ~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~ 328 (595)
T 1fwx_A 251 QELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE 328 (595)
T ss_dssp EEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB
T ss_pred eEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC
Confidence 12477777765 3221334432 23456799999 888766655 78899999998653 455554
Q ss_pred CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCC---c-cCcceecCCCceeeeeCCcEEEEcc
Q 046451 305 AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAP---L-RAPKWYKRPAGASFGFGGKLVSFHP 380 (719)
Q Consensus 305 ~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~---~-~~p~w~~~~~~~s~s~~Gklv~~~~ 380 (719)
... ....++|+++| +..++...|+.|.+||+++......++....... + ..|.-.....+.+++.|||.+...+
T Consensus 329 vG~-gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 329 LGL-GPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp CCS-CEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred CCC-CcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 443 48899999999 7888888899999999987332111221111000 0 1122222336678899999887666
Q ss_pred CCC
Q 046451 381 KSS 383 (719)
Q Consensus 381 ~~~ 383 (719)
...
T Consensus 407 k~s 409 (595)
T 1fwx_A 407 KFS 409 (595)
T ss_dssp SCC
T ss_pred CCC
Confidence 544
No 245
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.67 E-value=1.5e-06 Score=86.10 Aligned_cols=181 Identities=11% Similarity=0.013 Sum_probs=125.9
Q ss_pred CEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC
Q 046451 125 PVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK 204 (719)
Q Consensus 125 ~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~ 204 (719)
....|.|+ ++.++++.+.+|.|+++|+.+++....+ +.. ...-..+++. +.++++..-.++.+.+||..
T Consensus 56 ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~-----~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~ 124 (268)
T 3nok_A 56 FTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME--RLG-----NIFAEGLASD--GERLYQLTWTEGLLFTWSGM 124 (268)
T ss_dssp CEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE--ECT-----TCCEEEEEEC--SSCEEEEESSSCEEEEEETT
T ss_pred ccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCC-----CcceeEEEEe--CCEEEEEEccCCEEEEEECC
Confidence 34688886 4577888888899999999999887664 222 1112335554 34677777789999999999
Q ss_pred CCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC--CC---CCeeEEEeCCCCCCe
Q 046451 205 KQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG--HT---KGVIAMSWCPNDSSY 279 (719)
Q Consensus 205 ~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~--h~---~~V~~v~~sp~d~~~ 279 (719)
+.+.+.++... ..-..++ +|++.++++. .++ .|.++|..+. +.+.++.- +. ..++.+.|. ++++
T Consensus 125 Tl~~~~ti~~~--~eGwGLt--~Dg~~L~vSd-Gs~---~l~~iDp~T~-~v~~~I~V~~~g~~v~~lNeLe~~--dG~l 193 (268)
T 3nok_A 125 PPQRERTTRYS--GEGWGLC--YWNGKLVRSD-GGT---MLTFHEPDGF-ALVGAVQVKLRGQPVELINELECA--NGVI 193 (268)
T ss_dssp TTEEEEEEECS--SCCCCEE--EETTEEEEEC-SSS---EEEEECTTTC-CEEEEEECEETTEECCCEEEEEEE--TTEE
T ss_pred cCcEEEEEeCC--CceeEEe--cCCCEEEEEC-CCC---EEEEEcCCCC-eEEEEEEeCCCCcccccccccEEe--CCEE
Confidence 99999999842 3334455 4565555544 344 8999998875 44555432 21 245677876 5665
Q ss_pred EEEEeCCCcEEEEECCCCeEEEEecCC-------------CCCeEEeEEcCCCCCEEEEEe
Q 046451 280 LLTCAKDNRTICWDTVSGEIVSELPAG-------------TNWNFDIHWYPKIPGVISASS 327 (719)
Q Consensus 280 l~sgs~Dg~I~iwd~~~~~~~~~l~~h-------------~~~v~~l~~spdg~~~las~s 327 (719)
++..-.++.|.+.|..+++.+..+... .+-.+.|+|++++..+++||-
T Consensus 194 yanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 555556889999999999998887532 135688999999877777763
No 246
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.65 E-value=4.8e-05 Score=89.56 Aligned_cols=244 Identities=12% Similarity=0.071 Sum_probs=151.0
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec--------cccCCEEEEEEeCCC
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS--------RHKGPVRGLEFNSFT 135 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~--------~h~~~V~~l~fsp~~ 135 (719)
...|.++....++ .|..|+.++-|.+||..+ + . ...+. .....|.++.... +
T Consensus 214 ~~~i~~i~~d~~g---------~lwigt~~~Gl~~~~~~~------~---~-~~~~~~~~~~~~~l~~~~i~~i~~d~-~ 273 (795)
T 4a2l_A 214 TKQIQAILQQSPT---------RIWVATEGAGLFLINPKT------K---E-IKNYLHSPSNPKSISSNYIRSLAMDS-Q 273 (795)
T ss_dssp CCCEEEEEEEETT---------EEEEEEBSSCEEEEETTT------T---E-EEEECCCTTCTTSCSCSBEEEEEECT-T
T ss_pred CCeeEEEEEcCCC---------CEEEEECCCCeEEEeCCC------C---e-EEEeecCCCCccccCCCeEEEEEEcC-C
Confidence 4568888877765 455565554588888732 1 1 12221 1235688998876 4
Q ss_pred CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-
Q 046451 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE- 214 (719)
Q Consensus 136 ~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~- 214 (719)
+. |..|+.+ -|.+||..+...............-....|.++....+|. |..|+.++-|.+||..+.... .+..
T Consensus 274 g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lWigt~~~Gl~~~~~~~~~~~-~~~~~ 348 (795)
T 4a2l_A 274 NR-LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG--MWLGTYFGGLNYYHPIRNRFK-NIRNI 348 (795)
T ss_dssp SC-EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC--EEEEESSSCEEEECGGGGSSE-EECCC
T ss_pred CC-EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC--EEEEECCCCeEEeCCCcccce-EEcCC
Confidence 44 5556655 5888987655322110000000111235799999998873 666777778999987655432 2211
Q ss_pred -----CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEee---------CCCCCeeEEEeCCCCCCeE
Q 046451 215 -----SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFV---------GHTKGVIAMSWCPNDSSYL 280 (719)
Q Consensus 215 -----~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~---------~h~~~V~~v~~sp~d~~~l 280 (719)
.....|.++..+.+|. |.+|+.++ -|..||..+.. ...+. .....|.++.... ++++|
T Consensus 349 ~~~~~l~~~~V~~i~~d~~g~--lWiGt~~~---Gl~~~~~~~~~--~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~l 420 (795)
T 4a2l_A 349 PYKNSLSDNVVSCIVEDKDKN--LWIGTNDG---GLNLYNPITQR--FTSYTLQEDESARGIGSNNIKAVYVDE-KKSLV 420 (795)
T ss_dssp TTSSSCSCSSEEEEEECTTSC--EEEEESSS---CEEEECTTTCC--EEEECCC------CCSCSCEEEEEEET-TTTEE
T ss_pred CCCCCCCCCeeEEEEECCCCC--EEEEECCC---CeEEEcCCCCc--EEEEecCCCCcccCCCCccEEEEEEcC-CCCEE
Confidence 1245689999988873 55566664 49999976532 22221 1235788888876 66647
Q ss_pred EEEeCCCcEEEEECCCCeEEEEec----CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 281 LTCAKDNRTICWDTVSGEIVSELP----AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 281 ~sgs~Dg~I~iwd~~~~~~~~~l~----~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
..|+.++-|.+||..+++...... .....|.++....+| .+.+.. . +.|.+||..+++..
T Consensus 421 Wigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~lwigt-~-~Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 421 YIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEG-NLWLGT-L-SALVRFNPEQRSFT 484 (795)
T ss_dssp EEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSS-CEEEEE-S-SCEEEEETTTTEEE
T ss_pred EEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCC-CEEEEe-c-CceeEEeCCCCeEE
Confidence 778887889999998876543322 134579999998888 454444 3 45888998876554
No 247
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.65 E-value=8.7e-07 Score=87.80 Aligned_cols=191 Identities=16% Similarity=0.205 Sum_probs=125.4
Q ss_pred CceeeeccccCC--EEEEEEeCCCCCEEEEEeCCC--cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEE
Q 046451 114 PLIAHLSRHKGP--VRGLEFNSFTPNLLASGADDG--EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHIL 189 (719)
Q Consensus 114 ~~~~~l~~h~~~--V~~l~fsp~~~~~lasgs~dg--~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l 189 (719)
+.+.++ .|... ...|.|+ ++.++.+.+.+| .|+++|+.+++....+. +.. ...-..+++. +.+++
T Consensus 32 ~vv~~~-phd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~-l~~-----~~FgeGit~~--g~~ly 100 (262)
T 3nol_A 32 QIVHSY-PHDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIE-LGK-----RYFGEGISDW--KDKIV 100 (262)
T ss_dssp EEEEEE-ECCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEE-CCT-----TCCEEEEEEE--TTEEE
T ss_pred EEEEEe-cCCCCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEe-cCC-----ccceeEEEEe--CCEEE
Confidence 334444 34433 4788997 456777777766 89999999998766542 111 1112234443 44566
Q ss_pred EEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCC--C---
Q 046451 190 ASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGH--T--- 264 (719)
Q Consensus 190 ~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h--~--- 264 (719)
+..-.++.+.+||..+.+.+.++... ..-..++ .|++.++++.+ ++ .|.++|..+. +.+.++.-. .
T Consensus 101 ~ltw~~~~v~v~D~~t~~~~~ti~~~--~eG~glt--~dg~~L~~SdG-s~---~i~~iDp~T~-~v~~~I~V~~~g~~~ 171 (262)
T 3nol_A 101 GLTWKNGLGFVWNIRNLRQVRSFNYD--GEGWGLT--HNDQYLIMSDG-TP---VLRFLDPESL-TPVRTITVTAHGEEL 171 (262)
T ss_dssp EEESSSSEEEEEETTTCCEEEEEECS--SCCCCEE--ECSSCEEECCS-SS---EEEEECTTTC-SEEEEEECEETTEEC
T ss_pred EEEeeCCEEEEEECccCcEEEEEECC--CCceEEe--cCCCEEEEECC-CC---eEEEEcCCCC-eEEEEEEeccCCccc
Confidence 66667899999999999999999842 2223444 45655555543 33 7999999875 445554321 1
Q ss_pred CCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCC------------CCCeEEeEEcCCCCCEEEEE
Q 046451 265 KGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAG------------TNWNFDIHWYPKIPGVISAS 326 (719)
Q Consensus 265 ~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h------------~~~v~~l~~spdg~~~las~ 326 (719)
..++.+.|. ++++++..-.++.|.+.|..+++.+..+... .+-.+.|+|++++..++++|
T Consensus 172 ~~lNELe~~--~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 172 PELNELEWV--DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp CCEEEEEEE--TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred cccceeEEE--CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 345567776 5665555557889999999999998887642 13468899999985556655
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.64 E-value=1.3e-05 Score=82.57 Aligned_cols=228 Identities=15% Similarity=0.104 Sum_probs=135.0
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
....+++|++++ +++++...++.|..||... .....+. ......++++.+ +++++++...
T Consensus 32 ~~pegia~~~~g--------~lyv~d~~~~~I~~~d~~g----------~~~~~~~-~~~~p~gia~~~-dG~l~vad~~ 91 (306)
T 2p4o_A 32 TFLENLASAPDG--------TIFVTNHEVGEIVSITPDG----------NQQIHAT-VEGKVSGLAFTS-NGDLVATGWN 91 (306)
T ss_dssp CCEEEEEECTTS--------CEEEEETTTTEEEEECTTC----------CEEEEEE-CSSEEEEEEECT-TSCEEEEEEC
T ss_pred CCcceEEECCCC--------CEEEEeCCCCeEEEECCCC----------ceEEEEe-CCCCceeEEEcC-CCcEEEEecc
Confidence 456789999987 6777776889999998731 2222222 234688999998 6776665543
Q ss_pred CC--cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce-eEEec--------
Q 046451 145 DG--EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP-VISFS-------- 213 (719)
Q Consensus 145 dg--~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~-~~~~~-------- 213 (719)
.. .|..+|..+++..... .+. .......++....+ .++++...++.|+++|..+++. +....
T Consensus 92 ~~~~~v~~~d~~~g~~~~~~-~~~-----~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~ 164 (306)
T 2p4o_A 92 ADSIPVVSLVKSDGTVETLL-TLP-----DAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNS 164 (306)
T ss_dssp TTSCEEEEEECTTSCEEEEE-ECT-----TCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSST
T ss_pred CCcceEEEEcCCCCeEEEEE-eCC-----CccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccc
Confidence 32 4666776665432111 010 11123445544443 4555544688999999876532 21110
Q ss_pred CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC--ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEE
Q 046451 214 ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS--PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC 291 (719)
Q Consensus 214 ~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~--~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~i 291 (719)
...-...+.| +++++.++++-...+ .|..||+..... ....+.. ......+++.+ +++++++....+.|.+
T Consensus 165 ~~~~~~pngi--s~dg~~lyv~d~~~~---~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~-dG~l~va~~~~~~V~~ 237 (306)
T 2p4o_A 165 ESVFPAANGL--KRFGNFLYVSNTEKM---LLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDV-EGNLYGATHIYNSVVR 237 (306)
T ss_dssp TCCSCSEEEE--EEETTEEEEEETTTT---EEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBT-TCCEEEECBTTCCEEE
T ss_pred cCCCCcCCCc--CcCCCEEEEEeCCCC---EEEEEEeCCCCCCCccEEEec-cCCCCCeEECC-CCCEEEEeCCCCeEEE
Confidence 0111234455 777766666665555 899999864211 1122211 13456788998 8887777777889999
Q ss_pred EECCCCeE--EEEecCCCCCeEEeEEc---CCCCCEEEEEe
Q 046451 292 WDTVSGEI--VSELPAGTNWNFDIHWY---PKIPGVISASS 327 (719)
Q Consensus 292 wd~~~~~~--~~~l~~h~~~v~~l~~s---pdg~~~las~s 327 (719)
||.. ++. +..+.......++++|. +++..++++..
T Consensus 238 ~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 238 IAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp ECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred ECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 9985 665 33444444568999998 78744555444
No 249
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.63 E-value=1.1e-06 Score=87.97 Aligned_cols=197 Identities=11% Similarity=-0.059 Sum_probs=128.8
Q ss_pred CeEEEEecCCCCcEEEEEeC--CCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC
Q 046451 175 EISFVSWNSKVQHILASTSY--NGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN 252 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~--dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~ 252 (719)
....+.|++++ .++++.+. ++.|+++|+.+++.+.++..........++++ ++.++++...++ .+.++|..+
T Consensus 22 f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~---~v~viD~~t 95 (266)
T 2iwa_A 22 FTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN---IGFIYDRRT 95 (266)
T ss_dssp CEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS---EEEEEETTT
T ss_pred CcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC---EEEEEECCC
Confidence 45789999885 45555443 68999999999999988763222233455565 445566655555 899999976
Q ss_pred CCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC-----CCeEEeEEcCCCCCEEEEEe
Q 046451 253 TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT-----NWNFDIHWYPKIPGVISASS 327 (719)
Q Consensus 253 ~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~-----~~v~~l~~spdg~~~las~s 327 (719)
. +.+.++......-.. +++ |++.|+++..+++|.++|..+.+.+..+.... ..++.+.|. ++ .+++...
T Consensus 96 ~-~v~~~i~~g~~~g~g--lt~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~ 169 (266)
T 2iwa_A 96 L-SNIKNFTHQMKDGWG--LAT-DGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVWANIW 169 (266)
T ss_dssp T-EEEEEEECCSSSCCE--EEE-CSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEET
T ss_pred C-cEEEEEECCCCCeEE--EEE-CCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEEEecC
Confidence 4 556666432122233 444 56666666778999999999999888876432 146788888 66 5667666
Q ss_pred CCCcEEEEeCCCCcccccCCCC-CCCC--CccCcceecCCCceeeeeCCcEEEEccCCCC
Q 046451 328 FDGKIGIYNIEGCSRYGVGDSN-FSAA--PLRAPKWYKRPAGASFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 328 ~Dg~I~iwd~~~~~~~~~~~~~-~~~~--~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~~ 384 (719)
.++.|.+.|..+++.+....-. +... ....+ -...+.|++|+.+|+.+.+....+.
T Consensus 170 ~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~-~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 170 QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFR-DIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCT-TCCCEEEEEEETTTTEEEEEETTCS
T ss_pred CCCeEEEEECCCCcEEEEEECCCccccccccccc-ccCceEEEEEcCCCCEEEEECCCCC
Confidence 7899999999999886632211 0000 00000 0123468999999988777766554
No 250
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.61 E-value=7.4e-05 Score=87.92 Aligned_cols=283 Identities=11% Similarity=0.114 Sum_probs=167.9
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceee--cccCCCCCceeeeecCCCCCCCCCccc
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLV--GESPSSERFNRLAWGKNGSGSEDFSLG 85 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~--~~~~~~~~V~~l~~sp~g~~~~~~~~~ 85 (719)
+.|.++....+|.+.+ |+.++.| .+|+.....-. .+... ...-....|.++....++
T Consensus 310 ~~i~~i~~D~~g~lWi-gt~~~Gl----------~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g--------- 368 (795)
T 4a2l_A 310 RSVRSIFMDSQGGMWL-GTYFGGL----------NYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDKDK--------- 368 (795)
T ss_dssp SCEEEEEECTTSCEEE-EESSSCE----------EEECGGGGSSE-EECCCTTSSSCSCSSEEEEEECTTS---------
T ss_pred CcEEEEEEeCCcCEEE-EECCCCe----------EEeCCCcccce-EEcCCCCCCCCCCCeeEEEEECCCC---------
Confidence 5577787877776543 4443333 34443321110 00000 001134568888887775
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec---------cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCC
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS---------RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAP 156 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~---------~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~ 156 (719)
.|..|+.++-|..||..+ + . ...+. .....|.++.... ++++|..|+.++-|.+||..++
T Consensus 369 ~lWiGt~~~Gl~~~~~~~------~---~-~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 369 NLWIGTNDGGLNLYNPIT------Q---R-FTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp CEEEEESSSCEEEECTTT------C---C-EEEECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEEEEEETTTC
T ss_pred CEEEEECCCCeEEEcCCC------C---c-EEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCC
Confidence 577788887899999732 2 1 22221 1235788998876 5664777888778999998775
Q ss_pred CCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecC-----CCCCceeEEEECCCCCc
Q 046451 157 AEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSE-----SIKRRCSVLQWNPDVAT 231 (719)
Q Consensus 157 ~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-----~~~~~i~~l~~sp~g~~ 231 (719)
+.. .+.... .......|.++....+|. |..|+.+ -|.+||..+++....... .....|.++..+.+|.
T Consensus 438 ~~~-~~~~~~--~~l~~~~v~~i~~d~~g~--lwigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~- 510 (795)
T 4a2l_A 438 QVE-NFNQRN--SQLVNENVYAILPDGEGN--LWLGTLS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKR- 510 (795)
T ss_dssp CEE-EECTTT--SCCSCSCEEEEEECSSSC--EEEEESS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCC-
T ss_pred cEE-EeecCC--CCcCCCeeEEEEECCCCC--EEEEecC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCC-
Confidence 432 211000 112345799999888863 4445554 588999887654332210 1235788999998874
Q ss_pred EEEEEeCCCCCCcEEEEecCCCCCceEEee-------CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec
Q 046451 232 QLVVASDEDSSPALRLWDMRNTMSPVKEFV-------GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP 304 (719)
Q Consensus 232 ~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~-------~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~ 304 (719)
+.+++.++ |.+||..+.. . .+. .....|.++.... ++.+.+ ++.+ -|..||..+++...--.
T Consensus 511 -lWigt~~G----l~~~~~~~~~--~-~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi-gT~~-Gl~~~d~~~~~~~~~~~ 579 (795)
T 4a2l_A 511 -LWIGGEEG----LSVFKQEGLD--I-QKASILPVSNVTKLFTNCIYEAS-NGIIWV-GTRE-GFYCFNEKDKQIKRYNT 579 (795)
T ss_dssp -EEEEESSC----EEEEEEETTE--E-EECCCSCSCGGGGSCEEEEEECT-TSCEEE-EESS-CEEEEETTTTEEEEECG
T ss_pred -EEEEeCCc----eEEEeCCCCe--E-EEecCCCCCCCCCCeeEEEEECC-CCCEEE-EeCC-CceeECCCCCcEEEeCC
Confidence 44444454 9999986532 1 221 1335788898887 666444 4444 68899987775443211
Q ss_pred --C-CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 305 --A-GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 305 --~-h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
+ ....|.++....+| .+.+++ ++-|..|+.++++..
T Consensus 580 ~~gl~~~~i~~i~~d~~g-~lWi~t--~~Gl~~~~~~~~~~~ 618 (795)
T 4a2l_A 580 TNGLPNNVVYGILEDSFG-RLWLST--NRGISCFNPETEKFR 618 (795)
T ss_dssp GGTCSCSCEEEEEECTTS-CEEEEE--TTEEEEEETTTTEEE
T ss_pred CCCCchhheEEEEECCCC-CEEEEc--CCceEEEcCCCCcEE
Confidence 1 23468899999888 555554 356778888776653
No 251
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.60 E-value=3.5e-05 Score=81.13 Aligned_cols=232 Identities=10% Similarity=-0.044 Sum_probs=145.1
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|+.+. ...|+..++.. .....+......+..++|++.++.++++-...+.|+.+++........ +
T Consensus 46 ~ll~~~-~~~I~~i~~~g----------~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~---~ 111 (349)
T 3v64_C 46 VLLFAN-RIDIRQVLPHR----------SEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV---V 111 (349)
T ss_dssp EEEEEC-BSCEEEECTTS----------CCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE---E
T ss_pred eeEeec-ccceEEEeCCC----------CeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEE---E
Confidence 454443 34577777632 222223233445789999985555666666778999999876543221 1
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
.. .......++++..+++++++-...+.|.++++........+. ........|++++.+..++++-... .+.|
T Consensus 112 ~~----~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-~~l~~P~~iavdp~~g~ly~td~~~--~~~I 184 (349)
T 3v64_C 112 ST----GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-QSLEKPRAIALHPMEGTIYWTDWGN--TPRI 184 (349)
T ss_dssp CS----SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-TTCSCEEEEEEETTTTEEEEEECSS--SCEE
T ss_pred eC----CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe-CCCCCcceEEEecCcCeEEEeccCC--CCEE
Confidence 11 112456788887665677777778899999988654333333 3445678999999776666665554 1279
Q ss_pred EEEecCCCCCceEEe-eCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEE
Q 046451 246 RLWDMRNTMSPVKEF-VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~-~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~la 324 (719)
..+++... ....+ .........|+|++.++.++++-...+.|..+|+........+.........|++. ++ .+++
T Consensus 185 ~r~~~dG~--~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~-~ly~ 260 (349)
T 3v64_C 185 EASSMDGS--GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-ED-SLYW 260 (349)
T ss_dssp EEEETTSC--SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TT-EEEE
T ss_pred EEEeCCCC--CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CC-EEEE
Confidence 99988643 22333 22334578999998344455555567889999986443333333444567888884 33 5777
Q ss_pred EEeCCCcEEEEeCCCCcc
Q 046451 325 ASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 325 s~s~Dg~I~iwd~~~~~~ 342 (719)
+-...+.|..++..+++.
T Consensus 261 td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 261 TDWHTKSINSANKFTGKN 278 (349)
T ss_dssp EETTTTEEEEEETTTCCS
T ss_pred ecCCCCeEEEEEccCCCc
Confidence 777788898888555544
No 252
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.57 E-value=1.4e-05 Score=89.96 Aligned_cols=271 Identities=11% Similarity=0.054 Sum_probs=153.9
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecccc--C--CEE-EEEEeCCCCCEEEEEeC------CCcEEEEcC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHK--G--PVR-GLEFNSFTPNLLASGAD------DGEICIWDL 153 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~--~--~V~-~l~fsp~~~~~lasgs~------dg~I~iwdl 153 (719)
..|+.++.|+.|..+|. .++ +.+....... . .+. ..... + ..+++++. ++.|+.+|.
T Consensus 116 ~~v~v~~~dg~l~alD~------~tG---~~~W~~~~~~~~~~~~~~~~P~v~--~-g~v~vg~~~~~~~~~g~v~a~D~ 183 (571)
T 2ad6_A 116 GQIVKKQANGHLLALDA------KTG---KINWEVEVCDPKVGSTLTQAPFVA--K-DTVLMGCSGAELGVRGAVNAFDL 183 (571)
T ss_dssp TEEEEECTTSEEEEEET------TTC---CEEEEEECCCGGGTCBCCSCCEEE--T-TEEEEECBCGGGTCCCEEEEEET
T ss_pred CEEEEEeCCCEEEEEEC------CCC---CEEEEecCCCCCccceeccCCEEE--C-CEEEEEecCCccCCCCEEEEEEC
Confidence 57888888999999998 455 5554443211 0 121 11121 3 45555554 789999999
Q ss_pred CCCCCCCccCCccCCC-------------------------------CCCCCCeEEEEecCCCCcEEEEEeCC-------
Q 046451 154 SAPAEPSHFPPLRGNG-------------------------------SAAQGEISFVSWNSKVQHILASTSYN------- 195 (719)
Q Consensus 154 ~~~~~~~~~~~l~~~~-------------------------------~~h~~~I~~l~~sp~g~~~l~s~s~d------- 195 (719)
.+++.+..+....... .........++++++.. +++.++.+
T Consensus 184 ~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g-~vy~~~g~~~~~~~~ 262 (571)
T 2ad6_A 184 KTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLN-LFYYGSGNPAPWNET 262 (571)
T ss_dssp TTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTT-EEEEECCCCSCSCGG
T ss_pred CCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCC-eEEEECCCCccccCC
Confidence 9988654432110000 00000011345556543 55555432
Q ss_pred ---------CcEEEEECCCCceeEEecCCCC--------CceeEEEECCCCC--cEEEEEeCCCCCCcEEEEecCCCCCc
Q 046451 196 ---------GTTVVWDLKKQKPVISFSESIK--------RRCSVLQWNPDVA--TQLVVASDEDSSPALRLWDMRNTMSP 256 (719)
Q Consensus 196 ---------g~I~iwd~~~~~~~~~~~~~~~--------~~i~~l~~sp~g~--~~l~~~s~d~~~~~I~lwDl~~~~~~ 256 (719)
+.|..+|.++++.+..+...+. ....-+....+|+ .+++.+..++ .++++|.+++ +.
T Consensus 263 ~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G---~l~~lD~~tG-~~ 338 (571)
T 2ad6_A 263 MRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNG---ILYTLNRENG-NL 338 (571)
T ss_dssp GSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTS---EEEEEETTTC-CE
T ss_pred ccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCc---EEEEEECCCC-CE
Confidence 3599999999999888763211 1111122223553 3456666666 8999998876 43
Q ss_pred eEEeeCCC-------------CCe--------------------------eEEEeCCCCCCeEEEEe-------------
Q 046451 257 VKEFVGHT-------------KGV--------------------------IAMSWCPNDSSYLLTCA------------- 284 (719)
Q Consensus 257 ~~~~~~h~-------------~~V--------------------------~~v~~sp~d~~~l~sgs------------- 284 (719)
+..+.... ..+ ..++|+| +..+|++..
T Consensus 339 ~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~ 417 (571)
T 2ad6_A 339 IVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDP-ESRTLYAGLNHICMDWEPFMLP 417 (571)
T ss_dssp EEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-TTTEEEEEEECEEEEEEECCCC
T ss_pred EeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECC-CCCEEEEEchhccccccccccc
Confidence 33322110 001 2356777 555555543
Q ss_pred ------------------------CCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 046451 285 ------------------------KDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 285 ------------------------~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~ 340 (719)
.+|.|..||+.+++.+.++..... +.+..+...+ .+++.++.||.|+.||..++
T Consensus 418 ~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~-~~~~~~~t~g-g~v~~g~~dg~l~a~D~~tG 495 (571)
T 2ad6_A 418 YRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA-AWGGTLYTKG-GLVWYATLDGYLKALDNKDG 495 (571)
T ss_dssp CCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC-CCSBCEEETT-TEEEEECTTSEEEEEETTTC
T ss_pred cccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCC-ccceeEEECC-CEEEEEcCCCeEEEEECCCC
Confidence 357899999999999888764332 3333333334 47777899999999999999
Q ss_pred cccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCCCC
Q 046451 341 SRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSSAG 385 (719)
Q Consensus 341 ~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~~~ 385 (719)
+.+-..+..-. .+ ...+.+..+|++++....+..+
T Consensus 496 ~~lw~~~~~~~-------~~---~~p~~~~~~G~~yv~~~~G~~g 530 (571)
T 2ad6_A 496 KELWNFKMPSG-------GI---GSPMTYSFKGKQYIGSMYGVGG 530 (571)
T ss_dssp CEEEEEECSSC-------CC---SCCEEEEETTEEEEEEEECCCT
T ss_pred CEEEEEeCCCC-------cE---eeeEEEEECCEEEEEEECCCCC
Confidence 88653221100 00 1124566899977766555544
No 253
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.56 E-value=4.3e-05 Score=80.41 Aligned_cols=222 Identities=10% Similarity=-0.016 Sum_probs=137.8
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEe
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA 143 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs 143 (719)
...+..++|++.+. .++++-...+.|..+++.. . .....+.........+++.+.+++++++-.
T Consensus 72 ~~~~~~l~~d~~~~-------~ly~~D~~~~~I~r~~~~g------~---~~~~~~~~~~~~p~glavd~~~g~ly~~d~ 135 (349)
T 3v64_C 72 LENAIALDFHHRRE-------LVFWSDVTLDRILRANLNG------S---NVEEVVSTGLESPGGLAVDWVHDKLYWTDS 135 (349)
T ss_dssp CSCEEEEEEETTTT-------EEEEEETTTTEEEEEETTS------C---SCEEEECSSCSCCCEEEEETTTTEEEEEET
T ss_pred CCceEEEEEecccc-------EEEEEeccCCceEEEecCC------C---CceEEEeCCCCCccEEEEecCCCeEEEEcC
Confidence 34578999997542 4555666778899998732 1 222222222344578888875566667767
Q ss_pred CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC-CcEEEEECCCCceeEEecCCCCCceeE
Q 046451 144 DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN-GTTVVWDLKKQKPVISFSESIKRRCSV 222 (719)
Q Consensus 144 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d-g~I~iwd~~~~~~~~~~~~~~~~~i~~ 222 (719)
..+.|.+.+++..... .+ +. ..-.....+++++.++.++++-..+ +.|..+++.... ...+....-.....
T Consensus 136 ~~~~I~~~~~dG~~~~-~l--~~----~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnG 207 (349)
T 3v64_C 136 GTSRIEVANLDGAHRK-VL--LW----QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNG 207 (349)
T ss_dssp TTTEEEEEETTSCSCE-EE--EC----TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEE
T ss_pred CCCeEEEEcCCCCceE-EE--Ee----CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcce
Confidence 7789999998754322 21 11 1123578999998766666666555 889999987543 33332123456789
Q ss_pred EEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEE
Q 046451 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSE 302 (719)
Q Consensus 223 l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~ 302 (719)
|+|++++..++++-...+ .|..+|+... .....+.........|++. ++.++++-...+.|..+|..+|+.+..
T Consensus 208 la~d~~~~~lY~aD~~~~---~I~~~~~dG~-~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~~~~ 281 (349)
T 3v64_C 208 LTIDYAGRRMYWVDAKHH---VIERANLDGS-HRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKNQEI 281 (349)
T ss_dssp EEEETTTTEEEEEETTTT---EEEEEETTSC-SCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EEEeCCCCEEEEEECCCC---EEEEEeCCCC-ceEEEEeCCCCCceEEEEE--CCEEEEecCCCCeEEEEEccCCCccEE
Confidence 999988766666655554 8999998643 2222233334556777773 455666666678888888767766665
Q ss_pred ecCCCCCeEEeEE
Q 046451 303 LPAGTNWNFDIHW 315 (719)
Q Consensus 303 l~~h~~~v~~l~~ 315 (719)
+........+|++
T Consensus 282 i~~~~~~p~gi~v 294 (349)
T 3v64_C 282 IRNKLHFPMDIHT 294 (349)
T ss_dssp EECSCSCCCCEEE
T ss_pred eccCCCCCceEEE
Confidence 5433333344433
No 254
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.56 E-value=2.5e-05 Score=83.47 Aligned_cols=234 Identities=10% Similarity=-0.051 Sum_probs=145.9
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|+.+. ...|+.+++.. . . ...+......+..++|++.++.++++-...+.|+.+++........ +
T Consensus 89 ~l~~~~-~~~I~~i~~~~------~---~-~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~---~ 154 (386)
T 3v65_B 89 VLLFAN-RIDIRQVLPHR------S---E-YTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV---V 154 (386)
T ss_dssp EEEEEC-BSCEEEECTTS------C---C-CEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE---E
T ss_pred eeEeec-CccceeeccCC------C---c-EEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE---E
Confidence 454443 35688888732 2 2 2222233456789999985555666666778999999876542221 1
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
.. .......+++++.+++++++-...+.|.++++........+. ........|++++.+..++++-... .+.|
T Consensus 155 ~~----~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~-~~l~~P~giavdp~~g~ly~td~~~--~~~I 227 (386)
T 3v65_B 155 ST----GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-QSLEKPRAIALHPMEGTIYWTDWGN--TPRI 227 (386)
T ss_dssp CS----SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC-SSCSCEEEEEEETTTTEEEEEECSS--SCEE
T ss_pred eC----CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec-CCCCCCcEEEEEcCCCeEEEeccCC--CCEE
Confidence 11 112345678877655677777777889999987554333333 3446678999998876666665544 1279
Q ss_pred EEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEE
Q 046451 246 RLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISA 325 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las 325 (719)
..+++... ...............|+|++.++.++++-+..+.|..+|+........+.........|++. .+ .++++
T Consensus 228 ~r~~~dG~-~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~-~ly~t 304 (386)
T 3v65_B 228 EASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-ED-SLYWT 304 (386)
T ss_dssp EEEETTSC-SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TT-EEEEE
T ss_pred EEEeCCCC-CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CC-EEEEe
Confidence 88988643 22222223344578999998344555555567889999986443333333344567888884 33 57777
Q ss_pred EeCCCcEEEEeCCCCccc
Q 046451 326 SSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 326 ~s~Dg~I~iwd~~~~~~~ 343 (719)
-...+.|..++..+++..
T Consensus 305 d~~~~~V~~~~~~~G~~~ 322 (386)
T 3v65_B 305 DWHTKSINSANKFTGKNQ 322 (386)
T ss_dssp ETTTTEEEEEETTTCCSC
T ss_pred eCCCCeEEEEECCCCcce
Confidence 777889999986555443
No 255
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.55 E-value=2.2e-05 Score=88.50 Aligned_cols=268 Identities=9% Similarity=0.044 Sum_probs=150.0
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecccc----CCEE-EEEEeCCCCCEEEEEe------CCCcEEEEcCC
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHK----GPVR-GLEFNSFTPNLLASGA------DDGEICIWDLS 154 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~----~~V~-~l~fsp~~~~~lasgs------~dg~I~iwdl~ 154 (719)
+|+.++.|+.|..+|. .++ +.+....... ..+. ...+. + ..|++++ .+|.|+.+|..
T Consensus 123 rV~v~t~dg~l~AlDa------~TG---~~~W~~~~~~~~~~~~~~ssP~v~--~-g~V~vg~~g~e~g~~g~v~A~D~~ 190 (599)
T 1w6s_A 123 LILKTQLDGNVAALNA------ETG---ETVWKVENSDIKVGSTLTIAPYVV--K-DKVIIGSSGAELGVRGYLTAYDVK 190 (599)
T ss_dssp EEEEECTTSEEEEEET------TTC---CEEEEEECCCGGGTCBCCSCCEEE--T-TEEEECCBCGGGTCCCEEEEEETT
T ss_pred EEEEEcCCCEEEEEEC------CCC---CEEEeecCCCCCccceeecCCEEE--C-CEEEEEecccccCCCCeEEEEECC
Confidence 3888888999999998 555 5554443211 0121 11121 3 3455554 37999999999
Q ss_pred CCCCCCccCCccCCCC-------C-----------------------CCCCe-EEEEecCCCCcEEEEEeCC--------
Q 046451 155 APAEPSHFPPLRGNGS-------A-----------------------AQGEI-SFVSWNSKVQHILASTSYN-------- 195 (719)
Q Consensus 155 ~~~~~~~~~~l~~~~~-------~-----------------------h~~~I-~~l~~sp~g~~~l~s~s~d-------- 195 (719)
+++.+..+........ . -...+ ..+++.++. .+++.+..+
T Consensus 191 TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~-g~vy~g~g~~~p~~~~~ 269 (599)
T 1w6s_A 191 TGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGT-NLIYFGTGNPAPWNETM 269 (599)
T ss_dssp TCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTT-TEEEEECCCCSCSCGGG
T ss_pred CCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCC-CEEEEeCCCCccccCcc
Confidence 9886544321110000 0 00001 134455554 366666654
Q ss_pred --------CcEEEEECCCCceeEEecCCCCC--------ceeEEEEC-CCCC--cEEEEEeCCCCCCcEEEEecCCCCCc
Q 046451 196 --------GTTVVWDLKKQKPVISFSESIKR--------RCSVLQWN-PDVA--TQLVVASDEDSSPALRLWDMRNTMSP 256 (719)
Q Consensus 196 --------g~I~iwd~~~~~~~~~~~~~~~~--------~i~~l~~s-p~g~--~~l~~~s~d~~~~~I~lwDl~~~~~~ 256 (719)
+.|..+|.++++.+..+...+.. ...-+... .+|+ ..++.++.++ .++++|.+++ +.
T Consensus 270 r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G---~l~~lD~~tG-~~ 345 (599)
T 1w6s_A 270 RPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNG---IVYTLDRTDG-AL 345 (599)
T ss_dssp SCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTS---EEEEEETTTC-CE
T ss_pred cCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCc---EEEEEECCCC-CE
Confidence 37999999999998887743221 11112222 4553 3456666666 8999998876 43
Q ss_pred eEEeeCC------------C-CCe--------------------------eEEEeCCCCCCeEEEE--------------
Q 046451 257 VKEFVGH------------T-KGV--------------------------IAMSWCPNDSSYLLTC-------------- 283 (719)
Q Consensus 257 ~~~~~~h------------~-~~V--------------------------~~v~~sp~d~~~l~sg-------------- 283 (719)
+...... . ..+ ..++|+| +..+|++.
T Consensus 346 lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~ 424 (599)
T 1w6s_A 346 VSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDP-KRELFFMGINHICMDWEPFMLP 424 (599)
T ss_dssp EEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-TTTEEEEEEECEEEEEEECCCC
T ss_pred eecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCC-CCCEEEEeccccceeeeccccc
Confidence 3332211 0 000 1345555 44444332
Q ss_pred -------------------e------CCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 284 -------------------A------KDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 284 -------------------s------~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
+ .+|.|..||+.+++.+.+...... +..-.+.-.+ .+++.++.|+.|+.||.+
T Consensus 425 ~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~-~~~g~~~tag-g~vf~gt~dg~l~A~D~~ 502 (599)
T 1w6s_A 425 YKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFA-VWGGTMATAG-DLVFYGTLDGYLKARDSD 502 (599)
T ss_dssp CCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSC-CCSBCEEETT-TEEEEECTTSEEEEEETT
T ss_pred ccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCC-ccCcceEecC-CEEEEECCCCeEEEEECC
Confidence 1 347899999999998887753221 2211122234 477779999999999999
Q ss_pred CCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCC
Q 046451 339 GCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
+++.+-..+.. ..... .-+.+..|||+++....+.
T Consensus 503 tG~~lW~~~l~--~g~~~--------~P~~y~~~G~qyv~~~~G~ 537 (599)
T 1w6s_A 503 TGDLLWKFKIP--SGAIG--------YPMTYTHKGTQYVAIYYGV 537 (599)
T ss_dssp TCCEEEEEECS--SCCCS--------CCEEEEETTEEEEEEEECC
T ss_pred CCCEEEEeeCC--CCcEe--------ccEEEEeCCEEEEEEEccC
Confidence 99986532211 11111 1256778999765555543
No 256
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.54 E-value=4.7e-06 Score=95.86 Aligned_cols=196 Identities=14% Similarity=0.139 Sum_probs=113.9
Q ss_pred EEEEeCCCCCEEEEEeCCC-------------------cEEEEcCCCCCCCCccCCccCCC--CCCCCCeEEEEecCCCC
Q 046451 128 GLEFNSFTPNLLASGADDG-------------------EICIWDLSAPAEPSHFPPLRGNG--SAAQGEISFVSWNSKVQ 186 (719)
Q Consensus 128 ~l~fsp~~~~~lasgs~dg-------------------~I~iwdl~~~~~~~~~~~l~~~~--~~h~~~I~~l~~sp~g~ 186 (719)
.+++++ +.++++.++.++ .|..+|..+++....+....... ...........+..+|.
T Consensus 234 ~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~ 312 (668)
T 1kv9_A 234 SMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGK 312 (668)
T ss_dssp CEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCc
Confidence 467877 567888887766 39999999988765532110000 00012222222223442
Q ss_pred --cEEEEEeCCCcEEEEECCCCceeEEecCCCC-----------Cc------------------------eeEEEECCCC
Q 046451 187 --HILASTSYNGTTVVWDLKKQKPVISFSESIK-----------RR------------------------CSVLQWNPDV 229 (719)
Q Consensus 187 --~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~-----------~~------------------------i~~l~~sp~g 229 (719)
..++.++.+|.++++|.++++.+..+..... .. -..++++++.
T Consensus 313 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~ 392 (668)
T 1kv9_A 313 PRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGT 392 (668)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCC
Confidence 3688899999999999999998754331110 00 0125677775
Q ss_pred CcEEEEEeC--------------------------------CCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCC
Q 046451 230 ATQLVVASD--------------------------------EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDS 277 (719)
Q Consensus 230 ~~~l~~~s~--------------------------------d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~ 277 (719)
..+++.... ....+.|..||++++ +.+-.+..+ ..+....+.. .+
T Consensus 393 g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG-~~~W~~~~~-~~~~~~~~~t-~g 469 (668)
T 1kv9_A 393 GLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQ-KAAWKVPYP-THWNGGTLST-AG 469 (668)
T ss_dssp TEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTT-EEEEEEEES-SSCCCCEEEE-TT
T ss_pred CEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCC-cEEEEccCC-CCCcCceeEe-CC
Confidence 433332110 001147999999876 333333322 2222223333 56
Q ss_pred CeEEEEeCCCcEEEEECCCCeEEEEecCCCCCe-EEeEEcCCCCCEEEEEe
Q 046451 278 SYLLTCAKDNRTICWDTVSGEIVSELPAGTNWN-FDIHWYPKIPGVISASS 327 (719)
Q Consensus 278 ~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v-~~l~~spdg~~~las~s 327 (719)
.++++++.|+.|++||.++|+.+..++...... .-+.+..+|..+++.++
T Consensus 470 g~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 470 NLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 788889999999999999999999887653311 23445566644555544
No 257
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.54 E-value=2.1e-06 Score=85.02 Aligned_cols=195 Identities=15% Similarity=0.064 Sum_probs=129.1
Q ss_pred CeEEEEecCCCCcEEEEEeCCC--cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC
Q 046451 175 EISFVSWNSKVQHILASTSYNG--TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN 252 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~dg--~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~ 252 (719)
....|.|+ ++ .++.+.+.+| .|+++|+++++.+.++.. ........+..+++.++++...++ .+.+||..+
T Consensus 44 ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l--~~~~FgeGit~~g~~ly~ltw~~~---~v~v~D~~t 116 (262)
T 3nol_A 44 FTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIEL--GKRYFGEGISDWKDKIVGLTWKNG---LGFVWNIRN 116 (262)
T ss_dssp EEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEESSSS---EEEEEETTT
T ss_pred ccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEec--CCccceeEEEEeCCEEEEEEeeCC---EEEEEECcc
Confidence 45788888 54 6777777766 899999999999988873 333333222234546666655555 899999987
Q ss_pred CCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC-----CCeEEeEEcCCCCCEEEEEe
Q 046451 253 TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT-----NWNFDIHWYPKIPGVISASS 327 (719)
Q Consensus 253 ~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~-----~~v~~l~~spdg~~~las~s 327 (719)
. +.+.++.....+ ..++ . |++.|+.+..+++|.++|..+.+.+.++.... ..++.+.|. +| .+.+..-
T Consensus 117 ~-~~~~ti~~~~eG-~glt--~-dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G-~lyan~w 189 (262)
T 3nol_A 117 L-RQVRSFNYDGEG-WGLT--H-NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG-EIFANVW 189 (262)
T ss_dssp C-CEEEEEECSSCC-CCEE--E-CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT-EEEEEET
T ss_pred C-cEEEEEECCCCc-eEEe--c-CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC-EEEEEEc
Confidence 5 667777643322 3444 3 55666666668899999999999888876421 235567887 66 5777666
Q ss_pred CCCcEEEEeCCCCcccccCCCC-CCC-CCccCcceecCCCceeeeeCCcEEEEccCCCC
Q 046451 328 FDGKIGIYNIEGCSRYGVGDSN-FSA-APLRAPKWYKRPAGASFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 328 ~Dg~I~iwd~~~~~~~~~~~~~-~~~-~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~~ 384 (719)
.++.|.+.|..+++.+...+-. +.. .....+ -...+.|++++.+++.+.+..+.+-
T Consensus 190 ~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~-~~~vlNGIA~dp~~~~lfVTGK~Wp 247 (262)
T 3nol_A 190 QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPS-PIDVLNGIAWDKEHHRLFVTGKLWP 247 (262)
T ss_dssp TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCS-SCCCEEEEEEETTTTEEEEEETTCS
T ss_pred cCCeEEEEECCCCcEEEEEECCcCccccccccC-cCCceEEEEEcCCCCEEEEECCCCC
Confidence 7889999999999987633221 000 000000 1123478999999988877766664
No 258
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.53 E-value=3.6e-05 Score=82.27 Aligned_cols=222 Identities=10% Similarity=-0.023 Sum_probs=138.6
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEe
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA 143 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs 143 (719)
...+..++|.+.+. .++++-...+.|..++++. . .....+.........+++.+.+++++++-.
T Consensus 115 ~~~~~gl~~d~~~~-------~ly~~D~~~~~I~r~~~~g------~---~~~~~~~~~~~~p~glavd~~~g~lY~~d~ 178 (386)
T 3v65_B 115 LENAIALDFHHRRE-------LVFWSDVTLDRILRANLNG------S---NVEEVVSTGLESPGGLAVDWVHDKLYWTDS 178 (386)
T ss_dssp CSCEEEEEEETTTT-------EEEEEETTTTEEEEEETTS------C---CEEEEECSSCSCCCCEEEETTTTEEEEEET
T ss_pred CCccEEEEEecCCC-------eEEEEeCCCCcEEEEecCC------C---CcEEEEeCCCCCccEEEEEeCCCeEEEEcC
Confidence 44578999997542 5666666778899998732 1 222222222334567888875566667667
Q ss_pred CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC-CcEEEEECCCCceeEEecCCCCCceeE
Q 046451 144 DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN-GTTVVWDLKKQKPVISFSESIKRRCSV 222 (719)
Q Consensus 144 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d-g~I~iwd~~~~~~~~~~~~~~~~~i~~ 222 (719)
..+.|.++++........ +.. .-.....|++++.++.++++-..+ +.|..+++.......... ..-.....
T Consensus 179 ~~~~I~~~~~dg~~~~~l---~~~----~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-~~~~~PnG 250 (386)
T 3v65_B 179 GTSRIEVANLDGAHRKVL---LWQ----SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-THLFWPNG 250 (386)
T ss_dssp TTTEEEECBTTSCSCEEE---ECS----SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-SSCSCEEE
T ss_pred CCCeEEEEeCCCCceEEe---ecC----CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE-CCCCCeee
Confidence 778899988875432211 111 123578999998766566665555 789999987543333332 33455789
Q ss_pred EEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEE
Q 046451 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSE 302 (719)
Q Consensus 223 l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~ 302 (719)
|+|++++.+++++-...+ .|..+|+... .....+.........|++. ++.++++-...+.|..+|..+|+.+..
T Consensus 251 lavd~~~~~lY~aD~~~~---~I~~~d~dG~-~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~~~~ 324 (386)
T 3v65_B 251 LTIDYAGRRMYWVDAKHH---VIERANLDGS-HRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKNQEI 324 (386)
T ss_dssp EEEEGGGTEEEEEETTTT---EEEEECTTSC-SCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EEEeCCCCEEEEEECCCC---EEEEEeCCCC-eeEEEEECCCCCceEEEEE--CCEEEEeeCCCCeEEEEECCCCcceEE
Confidence 999987766666655555 8999998643 2222333334456778873 456666666778898888767776666
Q ss_pred ecCCCCCeEEeEE
Q 046451 303 LPAGTNWNFDIHW 315 (719)
Q Consensus 303 l~~h~~~v~~l~~ 315 (719)
+........+|++
T Consensus 325 i~~~~~~p~gi~v 337 (386)
T 3v65_B 325 IRNKLHFPMDIHT 337 (386)
T ss_dssp EECSCSCCCCEEE
T ss_pred EccCCCCCceEEE
Confidence 6543333444443
No 259
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.51 E-value=7.6e-06 Score=80.36 Aligned_cols=183 Identities=14% Similarity=0.098 Sum_probs=122.3
Q ss_pred CCEEEEEEeCCCCCEEEEEeCC--CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEE
Q 046451 124 GPVRGLEFNSFTPNLLASGADD--GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVW 201 (719)
Q Consensus 124 ~~V~~l~fsp~~~~~lasgs~d--g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iw 201 (719)
.....|.|+. +.++.+.+.+ ..|+++|+.+++....+. +.. ...-..+++. +.+++...-.++.+.+|
T Consensus 21 ~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~-l~~-----~~fgeGi~~~--~~~ly~ltw~~~~v~v~ 90 (243)
T 3mbr_X 21 AFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAE-VPP-----PYFGAGIVAW--RDRLIQLTWRNHEGFVY 90 (243)
T ss_dssp CCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEE-CCT-----TCCEEEEEEE--TTEEEEEESSSSEEEEE
T ss_pred cccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEe-CCC-----CcceeEEEEe--CCEEEEEEeeCCEEEEE
Confidence 3456899975 4566666665 489999999998765531 111 1111234443 34577777779999999
Q ss_pred ECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCC-----CCeeEEEeCCCC
Q 046451 202 DLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHT-----KGVIAMSWCPND 276 (719)
Q Consensus 202 d~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~-----~~V~~v~~sp~d 276 (719)
|..+.+.+.++... ..-..++ .++..++++-+ ++ .|.++|..+. +.+.++.-.. ..++.+.|. +
T Consensus 91 D~~tl~~~~ti~~~--~~Gwglt--~dg~~L~vSdg-s~---~l~~iDp~t~-~~~~~I~V~~~g~~~~~lNeLe~~--~ 159 (243)
T 3mbr_X 91 DLATLTPRARFRYP--GEGWALT--SDDSHLYMSDG-TA---VIRKLDPDTL-QQVGSIKVTAGGRPLDNLNELEWV--N 159 (243)
T ss_dssp ETTTTEEEEEEECS--SCCCEEE--ECSSCEEEECS-SS---EEEEECTTTC-CEEEEEECEETTEECCCEEEEEEE--T
T ss_pred ECCcCcEEEEEeCC--CCceEEe--eCCCEEEEECC-CC---eEEEEeCCCC-eEEEEEEEccCCcccccceeeEEe--C
Confidence 99999999999843 3334555 45655565543 44 8999999875 4455554321 345667776 5
Q ss_pred CCeEEEEeCCCcEEEEECCCCeEEEEecCC-------------CCCeEEeEEcCCCCCEEEEEe
Q 046451 277 SSYLLTCAKDNRTICWDTVSGEIVSELPAG-------------TNWNFDIHWYPKIPGVISASS 327 (719)
Q Consensus 277 ~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h-------------~~~v~~l~~spdg~~~las~s 327 (719)
+++++..-.++.|.+.|..+|+.+..+... .+-.+.|+|++++..+++||-
T Consensus 160 G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 160 GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 665555556889999999999998887621 134688999999866666663
No 260
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.48 E-value=3.9e-05 Score=79.57 Aligned_cols=182 Identities=10% Similarity=-0.038 Sum_probs=116.2
Q ss_pred CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC---ceeEEecCCCCCceeE
Q 046451 146 GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ---KPVISFSESIKRRCSV 222 (719)
Q Consensus 146 g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~---~~~~~~~~~~~~~i~~ 222 (719)
..|+..|+.+.+....+ . .......++|++.++.++++-..++.|+.+|+... .....+..........
T Consensus 10 ~~I~~i~~~~~~~~~~~---~-----~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLI---P-----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (316)
T ss_dssp SSEEEEETTSCCCEEEE---C-----SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred CeEEEEECCCcceEehh---c-----CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence 56888898876543322 1 12367899999876667777777899999998861 2222222122345678
Q ss_pred EEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeC-C-CcEEEEECCCCeEE
Q 046451 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAK-D-NRTICWDTVSGEIV 300 (719)
Q Consensus 223 l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~-D-g~I~iwd~~~~~~~ 300 (719)
+++++.+..++++-...+ .|.++|+... .....+.........+++.| .+.+|+.+.. . +.|..+++. |+..
T Consensus 82 lavd~~~~~ly~~d~~~~---~I~~~~~~g~-~~~~~~~~~~~~P~~iavdp-~~g~ly~~d~~~~~~I~~~~~d-G~~~ 155 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLG---TVSVADTKGV-KRKTLFRENGSKPRAIVVDP-VHGFMYWTDWGTPAKIKKGGLN-GVDI 155 (316)
T ss_dssp EEEETTTTEEEEEETTTT---EEEEEETTSS-SEEEEEECTTCCEEEEEEET-TTTEEEEEECSSSCEEEEEETT-SCCE
T ss_pred EEEeecCCeEEEEECCCC---EEEEEeCCCC-ceEEEEECCCCCcceEEeCC-CCCEEEEEccCCCCeEEEEcCC-CCCe
Confidence 999876656666655555 8999998643 22222333345678999998 4444444443 3 688888885 4333
Q ss_pred EEe-cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 301 SEL-PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 301 ~~l-~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
..+ ...-.+...|+|++++..++++-+..++|..+|+.+..
T Consensus 156 ~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~ 197 (316)
T 1ijq_A 156 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 197 (316)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc
Confidence 333 23345688999998875666777777899999998643
No 261
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.48 E-value=9.4e-05 Score=76.64 Aligned_cols=233 Identities=11% Similarity=-0.018 Sum_probs=141.0
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCC---CCCCcc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAP---AEPSHF 162 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~---~~~~~~ 162 (719)
+|+.+. ...|+..|+.. . .....+ ........++|++.++.++++-..++.|+.+|+... .....+
T Consensus 3 ~ll~~~-~~~I~~i~~~~------~---~~~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~ 71 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDR------S---EYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV 71 (316)
T ss_dssp EEEEEC-BSSEEEEETTS------C---CCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE
T ss_pred EEEEEC-CCeEEEEECCC------c---ceEehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE
Confidence 344443 34688888732 2 222222 234567899999845556666666789999998762 221111
Q ss_pred CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCC
Q 046451 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSS 242 (719)
Q Consensus 163 ~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~ 242 (719)
+.. .-.....++++..+++++++-..++.|.++|+........+. ........+++++.+..++++.... .
T Consensus 72 --~~~----~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~P~~iavdp~~g~ly~~d~~~--~ 142 (316)
T 1ijq_A 72 --ISR----DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGT--P 142 (316)
T ss_dssp --ECS----SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-CTTCCEEEEEEETTTTEEEEEECSS--S
T ss_pred --EeC----CCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEE-CCCCCcceEEeCCCCCEEEEEccCC--C
Confidence 111 112456788876555666776778899999987544333332 2345678999998766666665433 1
Q ss_pred CcEEEEecCCCCCceEEe-eCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE--EEEecCCCCCeEEeEEcCCC
Q 046451 243 PALRLWDMRNTMSPVKEF-VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI--VSELPAGTNWNFDIHWYPKI 319 (719)
Q Consensus 243 ~~I~lwDl~~~~~~~~~~-~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~--~~~l~~h~~~v~~l~~spdg 319 (719)
+.|..+++... ....+ ...-.....|+|++.++.++++-+..+.|..+|+..... +............|++.. +
T Consensus 143 ~~I~~~~~dG~--~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-~ 219 (316)
T 1ijq_A 143 AKIKKGGLNGV--DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-D 219 (316)
T ss_dssp CEEEEEETTSC--CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-T
T ss_pred CeEEEEcCCCC--CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC-C
Confidence 27888888532 23333 223456789999983444445555677999999964322 222112234567888853 3
Q ss_pred CCEEEEEeCCCcEEEEeCCCCcc
Q 046451 320 PGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 320 ~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
.++++-...++|..++..+++.
T Consensus 220 -~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 220 -KVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp -EEEEEETTTTEEEEEETTTCCC
T ss_pred -EEEEEECCCCeEEEEeCCCCcc
Confidence 6777777788999999866654
No 262
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.46 E-value=7.4e-05 Score=74.31 Aligned_cols=205 Identities=8% Similarity=0.077 Sum_probs=132.8
Q ss_pred eeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCc
Q 046451 118 HLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGT 197 (719)
Q Consensus 118 ~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~ 197 (719)
.+.+-.+.+..++|+++++.++++...++.|...|+. ++....+. +. .......|++..++ .++++.-.++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~-l~-----g~~D~EGIa~~~~g-~~~vs~E~~~~ 92 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIP-LD-----FVKDLETIEYIGDN-QFVISDERDYA 92 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEE-CS-----SCSSEEEEEECSTT-EEEEEETTTTE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEe-cC-----CCCChHHeEEeCCC-EEEEEECCCCc
Confidence 4445567899999999555566678888999999987 55444431 11 12467889998876 45566556788
Q ss_pred EEEEECCCCce---eEEec-----CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC--CCCceEEee------
Q 046451 198 TVVWDLKKQKP---VISFS-----ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN--TMSPVKEFV------ 261 (719)
Q Consensus 198 I~iwd~~~~~~---~~~~~-----~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~--~~~~~~~~~------ 261 (719)
+.++++..... +.... ...+.....|+|++++..++++.-.+ ...||.++. ....+..+.
T Consensus 93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~----p~~i~~~~g~~~~~~l~i~~~~~~~~ 168 (255)
T 3qqz_A 93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN----PIEVYKVNGLLSSNELHISKDKALQR 168 (255)
T ss_dssp EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS----SEEEEEEESTTCSSCCEEEECHHHHH
T ss_pred EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC----CceEEEEcccccCCceeeecchhhcc
Confidence 99998876442 22221 12345578999999986655554444 344554431 111122221
Q ss_pred -CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC---------CCeEEeEEcCCCCCEEEEEeCCCc
Q 046451 262 -GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT---------NWNFDIHWYPKIPGVISASSFDGK 331 (719)
Q Consensus 262 -~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~---------~~v~~l~~spdg~~~las~s~Dg~ 331 (719)
.+...+.+++++|..+++++....++.|.++|.. |+.+..+.-.. ..-..|+|.++| ++.++ ++.+.
T Consensus 169 ~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G-~lyIv-sE~n~ 245 (255)
T 3qqz_A 169 QFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG-NIYIV-SEPNR 245 (255)
T ss_dssp TCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTC-CEEEE-ETTTE
T ss_pred ccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCC-CEEEE-cCCce
Confidence 1344678999999777788888888899999974 66655543221 246899999999 55555 66676
Q ss_pred EEEEeC
Q 046451 332 IGIYNI 337 (719)
Q Consensus 332 I~iwd~ 337 (719)
+++|.-
T Consensus 246 ~y~f~~ 251 (255)
T 3qqz_A 246 FYRFTP 251 (255)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 666654
No 263
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.45 E-value=3.1e-05 Score=90.39 Aligned_cols=253 Identities=11% Similarity=0.008 Sum_probs=134.4
Q ss_pred ccceEEEc-CCCCeEEEeeccceeecccCCCceEEEEEeecc-CCcccceeecccCCCCCceeeeecCCCCCCCCCccce
Q 046451 9 RSASVAFA-PDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQ-SEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 9 ~V~~vafS-pdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~-~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
.+...+|| |||++||.+...+. +....|+++|++.+ +.... .. ......++|++|+ +.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G-----~~~~~l~v~dl~~g~~~l~~-----~~--~~~~~~~~WspDg--------~~ 234 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSG-----NEVYTIEFKRISDPSQTIAD-----KV--SGTNGEIVWGPDH--------TS 234 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSS-----SSCEEEEEEETTCTTCCCCC-----CE--EEECSCCEECSST--------TE
T ss_pred EEeeeEecCCCCCEEEEEEeCCC-----CceEEEEEEECCCCCEeCCc-----cc--cCceeeEEEecCC--------CE
Confidence 46778999 99999997754220 12235788888766 42111 00 1124578999998 45
Q ss_pred EEEEcCC-----CcEEEEcCCccccCCCCCCCCceeeec-cccCCEEEEEEeCCCCCEEEEEeC---CCcEEEEcCCCCC
Q 046451 87 VAGGLVD-----GSIDIWNPLSLISSGETGGNPLIAHLS-RHKGPVRGLEFNSFTPNLLASGAD---DGEICIWDLSAPA 157 (719)
Q Consensus 87 lasgs~d-----g~I~lwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~fsp~~~~~lasgs~---dg~I~iwdl~~~~ 157 (719)
|+....| ..|+++++.+.. . .....+. ........+.|++ |+++|+..+. ...|+++|+.+..
T Consensus 235 l~y~~~d~~~~~~~v~~~~lgt~~----~---~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~ 306 (751)
T 2xe4_A 235 LFYVTKDETLRENKVWRHVMGKLQ----S---EDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGN 306 (751)
T ss_dssp EEEEEECTTCCEEEEEEEETTSCG----G---GCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCT
T ss_pred EEEEEECCCCCCCEEEEEECCCCc----h---hcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCC
Confidence 5555444 257777773211 0 1112222 2234567889999 7787766552 3468889988753
Q ss_pred C-C--CccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC----CcEEEEECCCC-ceeE-EecCCCCCceeEEEECCC
Q 046451 158 E-P--SHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN----GTTVVWDLKKQ-KPVI-SFSESIKRRCSVLQWNPD 228 (719)
Q Consensus 158 ~-~--~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d----g~I~iwd~~~~-~~~~-~~~~~~~~~i~~l~~sp~ 228 (719)
. . .. +. ....+....+.|+.. ..+++....+ ..|.++|+.+. +... .+.......+..+.+.
T Consensus 307 ~~~~~~~---l~---~~~~~~~~s~~~~~g-~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-- 377 (751)
T 2xe4_A 307 AHNTLEI---VR---PREKGVRYDVQMHGT-SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-- 377 (751)
T ss_dssp TCCCEEE---SS---CCCTTCCEEEEEETT-TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--
T ss_pred CCceeEE---ee---cCCCCceEEEeeeeC-CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--
Confidence 2 2 22 11 112335566666544 4455555544 36777787652 2222 2321222245566665
Q ss_pred CCcEEEEEeCCCCCCcEEEEecC------CCCCceEEeeCC-CCCeeEEEe----CCCCCCeEEEEeCC---CcEEEEEC
Q 046451 229 VATQLVVASDEDSSPALRLWDMR------NTMSPVKEFVGH-TKGVIAMSW----CPNDSSYLLTCAKD---NRTICWDT 294 (719)
Q Consensus 229 g~~~l~~~s~d~~~~~I~lwDl~------~~~~~~~~~~~h-~~~V~~v~~----sp~d~~~l~sgs~D---g~I~iwd~ 294 (719)
++.++++...++ ...|+++|+. .....++.+... ...+..+.+ +.++..++++.+.. ..+..+|+
T Consensus 378 ~~~lv~~~~~~g-~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~ 456 (751)
T 2xe4_A 378 SNYLVVAGRRAG-LTRIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSP 456 (751)
T ss_dssp SSEEEEEEEETT-EEEEEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECT
T ss_pred CCEEEEEEEeCC-EEEEEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 445666666665 2246667751 222213333211 122344433 34344555555543 46778888
Q ss_pred CCCeE
Q 046451 295 VSGEI 299 (719)
Q Consensus 295 ~~~~~ 299 (719)
.+++.
T Consensus 457 ~~~~~ 461 (751)
T 2xe4_A 457 QDHSR 461 (751)
T ss_dssp TTCCE
T ss_pred CCCcE
Confidence 77753
No 264
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.45 E-value=6.9e-05 Score=84.48 Aligned_cols=272 Identities=13% Similarity=0.054 Sum_probs=151.9
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccC----CEE-EEEEeC--CCCC-EEEEEe------CCCcEEE
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKG----PVR-GLEFNS--FTPN-LLASGA------DDGEICI 150 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~----~V~-~l~fsp--~~~~-~lasgs------~dg~I~i 150 (719)
+.|+.++.|+.|..+|. .++ +.+........ .+. ...+.. .+++ .|++++ .++.|+.
T Consensus 118 ~~v~~~t~dg~l~AlD~------~TG---~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~a 188 (582)
T 1flg_A 118 DKVFFGTLDASVVALNK------NTG---KVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFA 188 (582)
T ss_dssp TEEEEEETTTEEEEEES------SSC---CEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEE
T ss_pred CEEEEEeCCCEEEEEEC------CCC---CEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEE
Confidence 47888888999999998 555 55554432210 111 111111 1122 566654 3789999
Q ss_pred EcCCCCCCCCccCCccCC-------------CCC---------------------CCCCeEEEEecCCCCcEEEEEeC--
Q 046451 151 WDLSAPAEPSHFPPLRGN-------------GSA---------------------AQGEISFVSWNSKVQHILASTSY-- 194 (719)
Q Consensus 151 wdl~~~~~~~~~~~l~~~-------------~~~---------------------h~~~I~~l~~sp~g~~~l~s~s~-- 194 (719)
+|..+++........... ... ....-..++++++.. +++.+..
T Consensus 189 lD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g-~vyv~~gn~ 267 (582)
T 1flg_A 189 RDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETN-TIIVGAGNP 267 (582)
T ss_dssp ECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTT-EEEEEECCB
T ss_pred EECCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCC-EEEEeCCCC
Confidence 999988765432110000 000 000012345566643 5555542
Q ss_pred ------------------C----CcEEEEECCCCceeEEecCC-CCC-------ceeEEEEC-CCCC--cEEEEEeCCCC
Q 046451 195 ------------------N----GTTVVWDLKKQKPVISFSES-IKR-------RCSVLQWN-PDVA--TQLVVASDEDS 241 (719)
Q Consensus 195 ------------------d----g~I~iwd~~~~~~~~~~~~~-~~~-------~i~~l~~s-p~g~--~~l~~~s~d~~ 241 (719)
| +.|..+|.++++.+..+... +.. ...-+... .+|+ .+++.++.++
T Consensus 268 ~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G- 346 (582)
T 1flg_A 268 GPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNG- 346 (582)
T ss_dssp SSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTS-
T ss_pred CcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCc-
Confidence 2 68999999999999887632 211 11112221 4554 3566777776
Q ss_pred CCcEEEEecCCCCCceEEeeCCC-------------C--------------------C------------eeEEEeCCCC
Q 046451 242 SPALRLWDMRNTMSPVKEFVGHT-------------K--------------------G------------VIAMSWCPND 276 (719)
Q Consensus 242 ~~~I~lwDl~~~~~~~~~~~~h~-------------~--------------------~------------V~~v~~sp~d 276 (719)
.|+++|.+++ +.+..+.... . . -..++++| +
T Consensus 347 --~l~~lD~~tG-~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~ 422 (582)
T 1flg_A 347 --FFYVVDRSNG-KLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQ-D 422 (582)
T ss_dssp --EEEEEETTTC-CEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECT-T
T ss_pred --eEEEEECCCC-CEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECC-C
Confidence 8999998876 3333322211 0 0 01345666 3
Q ss_pred CCeEEEEe---------------------------------CCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEE
Q 046451 277 SSYLLTCA---------------------------------KDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVI 323 (719)
Q Consensus 277 ~~~l~sgs---------------------------------~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~l 323 (719)
..++++.. .+|.|..||+.+|+.+.++..+.. +..-.....+ .++
T Consensus 423 ~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~-~~~g~~~tag-glv 500 (582)
T 1flg_A 423 TGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLP-LWAGVLATAG-NLV 500 (582)
T ss_dssp TCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSC-CCSCCEEETT-TEE
T ss_pred CCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCC-CcccceEeCC-CEE
Confidence 34444432 258899999999999887764432 2221222234 478
Q ss_pred EEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCC
Q 046451 324 SASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 324 as~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
+.++.|+.|+.||.++++.+-.....-.. .- .-+++..|||.++....+.
T Consensus 501 f~g~~dg~l~A~D~~tG~~lW~~~~~~g~--~a--------~P~~y~~~G~qYv~~~~G~ 550 (582)
T 1flg_A 501 FTGTGDGYFKAFDAKSGKELWKFQTGSGI--VS--------PPITWEQDGEQYLGVTVGY 550 (582)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEECSSCC--CS--------CCEEEEETTEEEEEEEECC
T ss_pred EEECCCCcEEEEECCCCCEEEEecCCCCc--cc--------CceEEEECCEEEEEEEccC
Confidence 88999999999999999886532211110 01 1256778998666555543
No 265
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.42 E-value=9.3e-05 Score=79.40 Aligned_cols=236 Identities=11% Similarity=-0.033 Sum_probs=145.0
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC---CCcc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE---PSHF 162 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~---~~~~ 162 (719)
+|+... ...|+..+++. .....+......+..|+|++.++.++++-..++.|+.+++..... ...+
T Consensus 85 ~ll~~~-~~~I~~i~l~~----------~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~ 153 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDR----------SEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV 153 (400)
T ss_dssp EEEEEE-TTEEEEECTTS----------CSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEE
T ss_pred eeEEec-cceeEEEccCC----------cceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEE
Confidence 444443 46788888742 222223334567889999985555566656678899999875321 1111
Q ss_pred CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCC
Q 046451 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSS 242 (719)
Q Consensus 163 ~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~ 242 (719)
+. ........|+++..+++++++-...+.|.+.|++.......+. ........|++++.+..++++-....
T Consensus 154 --~~----~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~-~~~~~P~~iavdp~~g~ly~td~~~~-- 224 (400)
T 3p5b_L 154 --IS----RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTP-- 224 (400)
T ss_dssp --EC----SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE-CSSCCEEEEEEETTTTEEEEEECSSS--
T ss_pred --Ee----CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe-CCCCCcceEEEecccCeEEEEeCCCC--
Confidence 11 1123567888887555677777778899999998665444443 34456789999997656666553321
Q ss_pred CcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec--CCCCCeEEeEEcCCCC
Q 046451 243 PALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP--AGTNWNFDIHWYPKIP 320 (719)
Q Consensus 243 ~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~--~h~~~v~~l~~spdg~ 320 (719)
+.|...++... .....+.........|++++.+++++++-...+.|..+|+........+. .......+|++..+
T Consensus 225 ~~I~~~~~dG~-~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~-- 301 (400)
T 3p5b_L 225 AKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-- 301 (400)
T ss_dssp CCEEEEETTSC-SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETT--
T ss_pred CEEEEEeCCCC-ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCC--
Confidence 27999998643 22222333345778999998344444444567889999986443322222 23345677887433
Q ss_pred CEEEEEeCCCcEEEEeCCCCcccc
Q 046451 321 GVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 321 ~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
.++++-...+.|..+|..+++...
T Consensus 302 ~lywtd~~~~~V~~~~~~~G~~~~ 325 (400)
T 3p5b_L 302 KVFWTDIINEAIFSANRLTGSDVN 325 (400)
T ss_dssp EEEEEESSSCSEEEEESSSCCCCE
T ss_pred EEEEecCCCCeEEEEEcCCCCceE
Confidence 577777778899999976665443
No 266
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.41 E-value=6.2e-05 Score=84.86 Aligned_cols=194 Identities=9% Similarity=0.041 Sum_probs=108.2
Q ss_pred EEEeCCCCCEEEEEeCC----------------CcEEEEcCCCCCCCCccCCccCC---CCCCCCCeEEEEec-CCCC--
Q 046451 129 LEFNSFTPNLLASGADD----------------GEICIWDLSAPAEPSHFPPLRGN---GSAAQGEISFVSWN-SKVQ-- 186 (719)
Q Consensus 129 l~fsp~~~~~lasgs~d----------------g~I~iwdl~~~~~~~~~~~l~~~---~~~h~~~I~~l~~s-p~g~-- 186 (719)
+++.+ +..+|+.++.+ +.|..+|.++++....+...... .......+. +... .+|.
T Consensus 246 ~a~d~-~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~ 323 (599)
T 1w6s_A 246 YAYDP-GTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKAR 323 (599)
T ss_dssp CEEET-TTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEE
T ss_pred eeEeC-CCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEE
Confidence 45556 45667766655 37999999998876543211100 000111221 2222 3442
Q ss_pred cEEEEEeCCCcEEEEECCCCceeEEecCCC-----------C-Cce--------------------------eEEEECCC
Q 046451 187 HILASTSYNGTTVVWDLKKQKPVISFSESI-----------K-RRC--------------------------SVLQWNPD 228 (719)
Q Consensus 187 ~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~-----------~-~~i--------------------------~~l~~sp~ 228 (719)
.+++.++.+|.++++|.++++.+....... . ..+ ..++++|+
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~ 403 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPK 403 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred EEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCC
Confidence 467778999999999999999887665211 0 001 23566666
Q ss_pred CCcEEEEEeC-----------------------------CC------CCCcEEEEecCCCCCceEEeeCCCCCeeEEEeC
Q 046451 229 VATQLVVASD-----------------------------ED------SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWC 273 (719)
Q Consensus 229 g~~~l~~~s~-----------------------------d~------~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~s 273 (719)
...+++...+ .+ ..+.|..||+++++ .+-.... ...+..-.+.
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~-~~W~~~~-~~~~~~g~~~ 481 (599)
T 1w6s_A 404 RELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGD-YKWEKME-RFAVWGGTMA 481 (599)
T ss_dssp TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCC-EEEEEEE-SSCCCSBCEE
T ss_pred CCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCC-EEeEecC-CCCccCcceE
Confidence 5433221100 00 12478889988763 3332221 1111111111
Q ss_pred CCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCe-EEeEEcCCCCCEEEEEe
Q 046451 274 PNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWN-FDIHWYPKIPGVISASS 327 (719)
Q Consensus 274 p~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v-~~l~~spdg~~~las~s 327 (719)
- .+.+++.++.|+.|+.||.++|+.+.+++.....+ .-+.|..+|..++++.+
T Consensus 482 t-agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 482 T-AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIYY 535 (599)
T ss_dssp E-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred e-cCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEEc
Confidence 1 45678889999999999999999999887543322 23455566644554433
No 267
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.40 E-value=0.00055 Score=80.25 Aligned_cols=241 Identities=10% Similarity=-0.007 Sum_probs=148.5
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec----------cccCCEEEEEEeC
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS----------RHKGPVRGLEFNS 133 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~----------~h~~~V~~l~fsp 133 (719)
...|.+|....+| .|-.|+.++-|..|+... . ....+. .....|.++....
T Consensus 312 ~~~v~~i~~D~~g---------~lWigt~~~Gl~~~~~~~------~----~~~~~~~~~~~~~~~~l~~~~v~~i~~d~ 372 (781)
T 3v9f_A 312 NASARYIFQDSFN---------NIWIGTWGGGINFISNAP------P----TFHTWSYSPTQMNESSLSNKVVSSVCDDG 372 (781)
T ss_dssp SSCEEEEEECSSC---------CEEEEEBSSCEEEECSSC------C----SCEEEC----CCCSSCCSSSCEEEEEECT
T ss_pred CCeEEEEEEeCCC---------CEEEEecCCeEEEeCCCC------C----cceeeccCccccccCCCCCcceEEEEEcC
Confidence 4568888887775 577788777889998732 1 111111 1235688888865
Q ss_pred CCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec
Q 046451 134 FTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS 213 (719)
Q Consensus 134 ~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~ 213 (719)
++ .|..|+.++-|.+||..+.... .+ ..........|.++....+| .|..|+.++-|..+|.++++......
T Consensus 373 -~g-~lWigt~~~Gl~~~~~~~~~~~-~~---~~~~~~~~~~v~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~~~~ 444 (781)
T 3v9f_A 373 -QG-KLWIGTDGGGINVFENGKRVAI-YN---KENRELLSNSVLCSLKDSEG--NLWFGTYLGNISYYNTRLKKFQIIEL 444 (781)
T ss_dssp -TS-CEEEEEBSSCEEEEETTEEEEE-CC--------CCCSBEEEEEECTTS--CEEEEETTEEEEEECSSSCEEEECCS
T ss_pred -CC-CEEEEeCCCcEEEEECCCCeEE-Ec---cCCCCCCCcceEEEEECCCC--CEEEEeccCCEEEEcCCCCcEEEecc
Confidence 44 4666776677899987654321 11 00011234579999988776 35557776779999987765432211
Q ss_pred -CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCC-----CCCeeEEEeCCCCCCeEEEEeCCC
Q 046451 214 -ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGH-----TKGVIAMSWCPNDSSYLLTCAKDN 287 (719)
Q Consensus 214 -~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h-----~~~V~~v~~sp~d~~~l~sgs~Dg 287 (719)
......|.++....+| .|.+++..+ |.+||..+.. ........ ...|.++.... ++. |..|+.++
T Consensus 445 ~~~~~~~v~~i~~d~~g--~lwigt~~G----l~~~~~~~~~-~~~~~~~~~~~~~~~~i~~i~~d~-~g~-lWigt~~~ 515 (781)
T 3v9f_A 445 EKNELLDVRVFYEDKNK--KIWIGTHAG----VFVIDLASKK-VIHHYDTSNSQLLENFVRSIAQDS-EGR-FWIGTFGG 515 (781)
T ss_dssp TTTCCCCEEEEEECTTS--EEEEEETTE----EEEEESSSSS-CCEEECTTTSSCSCSCEEEEEECT-TCC-EEEEESSS
T ss_pred CCCCCCeEEEEEECCCC--CEEEEECCc----eEEEeCCCCe-EEecccCcccccccceeEEEEEcC-CCC-EEEEEcCC
Confidence 1234678899888886 355555554 9999987542 22211111 35788888877 655 44556545
Q ss_pred cEEEEECCCCeEEEEecC---CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 288 RTICWDTVSGEIVSELPA---GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 288 ~I~iwd~~~~~~~~~l~~---h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
-|..||..+++....... ....|.++....+| .+.++. .+|.|..||..+++.
T Consensus 516 Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~lWi~T-~~Glv~~~d~~~~~~ 571 (781)
T 3v9f_A 516 GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKG-QMWLAT-GEGLVCFPSARNFDY 571 (781)
T ss_dssp CEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTS-CEEEEE-TTEEEEESCTTTCCC
T ss_pred CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCC-CEEEEE-CCCceEEECCCCCcE
Confidence 588899877654332211 23568999998888 454444 366658888877654
No 268
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.40 E-value=9e-05 Score=83.57 Aligned_cols=178 Identities=17% Similarity=0.118 Sum_probs=102.0
Q ss_pred CcEEEEcCCCCCCCCccCCccCC---CCCCCCCeEEEEec-CCCC--cEEEEEeCCCcEEEEECCCCceeEEecCCCC--
Q 046451 146 GEICIWDLSAPAEPSHFPPLRGN---GSAAQGEISFVSWN-SKVQ--HILASTSYNGTTVVWDLKKQKPVISFSESIK-- 217 (719)
Q Consensus 146 g~I~iwdl~~~~~~~~~~~l~~~---~~~h~~~I~~l~~s-p~g~--~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~-- 217 (719)
+.|..+|..+++....+...... .......+ -+... .+|. .+++.++.+|.++++|.++++.+..+.....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 58999999998876553211000 00011122 12222 3443 3788899999999999999998876653210
Q ss_pred ----------Cc--------------------------------eeEEEECCCCCcEEEEEeC-----------------
Q 046451 218 ----------RR--------------------------------CSVLQWNPDVATQLVVASD----------------- 238 (719)
Q Consensus 218 ----------~~--------------------------------i~~l~~sp~g~~~l~~~s~----------------- 238 (719)
.. -..++++|+...+++....
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 00 0134566665444333210
Q ss_pred ------------CCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCC
Q 046451 239 ------------EDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAG 306 (719)
Q Consensus 239 ------------d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h 306 (719)
....+.|..||+++++ .+-...... .+..-...- .+.+++.++.|+.|+.||.++|+.+.+++..
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~-~~W~~~~~~-~~~~g~~~t-agglvf~g~~dg~l~A~D~~tG~~lW~~~~~ 526 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGK-VVWEHKEHL-PLWAGVLAT-AGNLVFTGTGDGYFKAFDAKSGKELWKFQTG 526 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCC-EEEEEEESS-CCCSCCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred eeccceeecCCCCCCcceEEEEECCCCC-EEEEecCCC-CCcccceEe-CCCEEEEECCCCcEEEEECCCCCEEEEecCC
Confidence 0012479999998763 333332221 111111111 3567888999999999999999999998765
Q ss_pred CCCe-EEeEEcCCCCCEEEEEe
Q 046451 307 TNWN-FDIHWYPKIPGVISASS 327 (719)
Q Consensus 307 ~~~v-~~l~~spdg~~~las~s 327 (719)
...+ .-+.|..+|..++++.+
T Consensus 527 ~g~~a~P~~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 527 SGIVSPPITWEQDGEQYLGVTV 548 (582)
T ss_dssp SCCCSCCEEEEETTEEEEEEEE
T ss_pred CCcccCceEEEECCEEEEEEEc
Confidence 4322 22566677754555443
No 269
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.39 E-value=2.7e-05 Score=76.44 Aligned_cols=196 Identities=11% Similarity=0.004 Sum_probs=127.7
Q ss_pred CCeEEEEecCCCCcEEEEEeCC--CcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecC
Q 046451 174 GEISFVSWNSKVQHILASTSYN--GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR 251 (719)
Q Consensus 174 ~~I~~l~~sp~g~~~l~s~s~d--g~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~ 251 (719)
.....+.|+. + .++.+.+.+ ..|+++|+.+++.+.++.......-..+++. ++++++....++ .+.+||.+
T Consensus 21 ~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~---~v~v~D~~ 93 (243)
T 3mbr_X 21 AFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNH---EGFVYDLA 93 (243)
T ss_dssp CCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS---EEEEEETT
T ss_pred cccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCC---EEEEEECC
Confidence 3567888886 2 566666665 4899999999999988873222222334444 446666665555 89999997
Q ss_pred CCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC-----CCeEEeEEcCCCCCEEEEE
Q 046451 252 NTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT-----NWNFDIHWYPKIPGVISAS 326 (719)
Q Consensus 252 ~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~-----~~v~~l~~spdg~~~las~ 326 (719)
+. +.+.++.....+ ..+++ ++..|+.+..+++|.++|..+.+.+.++.... ..++.+.|. +| .+++..
T Consensus 94 tl-~~~~ti~~~~~G-wglt~---dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G-~lyanv 166 (243)
T 3mbr_X 94 TL-TPRARFRYPGEG-WALTS---DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG-ELLANV 166 (243)
T ss_dssp TT-EEEEEEECSSCC-CEEEE---CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEE
T ss_pred cC-cEEEEEeCCCCc-eEEee---CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC-EEEEEE
Confidence 75 566666643322 45553 45666666678999999999999888876432 245677776 55 566666
Q ss_pred eCCCcEEEEeCCCCcccccCCCC-CCCCCcc--CcceecCCCceeeeeCCcEEEEccCCCC
Q 046451 327 SFDGKIGIYNIEGCSRYGVGDSN-FSAAPLR--APKWYKRPAGASFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 327 s~Dg~I~iwd~~~~~~~~~~~~~-~~~~~~~--~p~w~~~~~~~s~s~~Gklv~~~~~~~~ 384 (719)
..+..|.+.|..+++.+...+-. +...... .+ -.....|+++..+++.+.+....+-
T Consensus 167 w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~-~~~vlNGIA~d~~~~~lfVTGK~wp 226 (243)
T 3mbr_X 167 WLTSRIARIDPASGKVVAWIDLQALVPDADALTDS-TNDVLNGIAFDAEHDRLFVTGKRWP 226 (243)
T ss_dssp TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCT-TSSCEEEEEEETTTTEEEEEETTCS
T ss_pred CCCCeEEEEECCCCCEEEEEECCcCccccccccCC-cCCceEEEEEcCCCCEEEEECCCCC
Confidence 66889999999999987632211 0000000 00 1123468899998887777665553
No 270
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.38 E-value=0.00011 Score=76.26 Aligned_cols=236 Identities=8% Similarity=-0.076 Sum_probs=144.7
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
+|+.+. ...|+.++++... .....+......+..++|++.++.++++-..++.|+.+++........+ +
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~--------~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~--~ 74 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGK--------ENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV--V 74 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTT--------SCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEE--E
T ss_pred EEEEEc-cCeEEEEECCCCc--------eEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEE--E
Confidence 344443 4678888884210 1111122223456789999855566666667789999998765432211 1
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcE
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPAL 245 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I 245 (719)
.. .-.....+++...+++++++-...+.|.++++........+. ........|++++.+..++++-.... +.|
T Consensus 75 ~~----~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-~~~~~P~giavdp~~g~ly~td~~~~--~~I 147 (318)
T 3sov_A 75 VS----GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW-QELDQPRAIALDPSSGFMYWTDWGEV--PKI 147 (318)
T ss_dssp EE----CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SSCSSEEEEEEEGGGTEEEEEECSSS--CEE
T ss_pred cC----CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEe-CCCCCccEEEEeCCCCEEEEEecCCC--CEE
Confidence 11 112456788887655677777778899999987544333332 34556789999987655555543321 378
Q ss_pred EEEecCCCCCceEEe-eCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEE
Q 046451 246 RLWDMRNTMSPVKEF-VGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 246 ~lwDl~~~~~~~~~~-~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~la 324 (719)
..+++... . ...+ ...-..-..|+|++.++.++++-+..+.|..+|+........+........++++..+ .++.
T Consensus 148 ~r~~~dG~-~-~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~--~lyw 223 (318)
T 3sov_A 148 ERAGMDGS-S-RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYW 223 (318)
T ss_dssp EEEETTSC-S-CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT--EEEE
T ss_pred EEEEcCCC-C-eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC--EEEE
Confidence 88888643 2 2233 2333456899999834444555556788999998643322223334456788888643 5777
Q ss_pred EEeCCCcEEEEeCCCCccc
Q 046451 325 ASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 325 s~s~Dg~I~iwd~~~~~~~ 343 (719)
+-...+.|..++..+++..
T Consensus 224 td~~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 224 TDWSTHSILACNKYTGEGL 242 (318)
T ss_dssp EETTTTEEEEEETTTCCSC
T ss_pred EecCCCeEEEEECCCCCce
Confidence 7777889999998776643
No 271
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.37 E-value=8.4e-05 Score=80.61 Aligned_cols=242 Identities=7% Similarity=0.018 Sum_probs=140.9
Q ss_pred CceeeeecCC-CCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC
Q 046451 66 RFNRLAWGKN-GSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 66 ~V~~l~~sp~-g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
....|+|+++ .. +.|+.+...+.|+.+|.. + ..+..+........+|+|++ +++++++...
T Consensus 140 ~P~gvavd~~s~~-------g~Lyv~D~~~~I~~id~~------~----g~v~~~~~~~~~P~giavd~-dG~lyVad~~ 201 (433)
T 4hw6_A 140 NIWRMMFDPNSNY-------DDLYWVGQRDAFRHVDFV------N----QYVDIKTTNIGQCADVNFTL-NGDMVVVDDQ 201 (433)
T ss_dssp CCCEEEECTTTTT-------CEEEEECBTSCEEEEETT------T----TEEEEECCCCSCEEEEEECT-TCCEEEEECC
T ss_pred CCceEEEccccCC-------CEEEEEeCCCCEEEEECC------C----CEEEEeecCCCCccEEEECC-CCCEEEEcCC
Confidence 4567888874 11 345555444888888872 2 23334444455688999999 6675554432
Q ss_pred C---C-cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEe-cCCCCCc
Q 046451 145 D---G-EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISF-SESIKRR 219 (719)
Q Consensus 145 d---g-~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~-~~~~~~~ 219 (719)
+ . .+..++.......... +. .-.....+++++++++++++-..++.|+.+|..++.....+ .......
T Consensus 202 ~~~~~~gv~~~~~~~~~~~~~~--~~-----~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~ 274 (433)
T 4hw6_A 202 SSDTNTGIYLFTRASGFTERLS--LC-----NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGS 274 (433)
T ss_dssp SCTTSEEEEEECGGGTTCCEEE--EE-----ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSS
T ss_pred CCcccceEEEEECCCCeecccc--cc-----ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCC
Confidence 1 1 1333332211110000 11 11245568888844456666667789999999877652222 2122233
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCc---eEEeeCC---------------CCCeeEEEe---------
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSP---VKEFVGH---------------TKGVIAMSW--------- 272 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~---~~~~~~h---------------~~~V~~v~~--------- 272 (719)
...|+|+++++.++++-.... .|+.+|....... ...+.+. -..-..+++
T Consensus 275 ~~~ia~dpdG~~LYvad~~~~---~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~d 351 (433)
T 4hw6_A 275 NFHIVWHPTGDWAYIIYNGKH---CIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGE 351 (433)
T ss_dssp CEEEEECTTSSEEEEEETTTT---EEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTS
T ss_pred cccEEEeCCCCEEEEEeCCCC---EEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEcccccccc
Confidence 457999999965666655555 8999886532111 1222221 123556888
Q ss_pred CCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC-----------------CCCCeEEeEEc-CCCCCEEEEEeCCCcEEE
Q 046451 273 CPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA-----------------GTNWNFDIHWY-PKIPGVISASSFDGKIGI 334 (719)
Q Consensus 273 sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~-----------------h~~~v~~l~~s-pdg~~~las~s~Dg~I~i 334 (719)
.. +++++++-...++|+.++. +|+....... .-.....|+++ .++ .++++-..+++|+.
T Consensus 352 d~-~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g-~lyVaD~~n~rIr~ 428 (433)
T 4hw6_A 352 ED-EYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRK-CFYIGDCDNHRVRK 428 (433)
T ss_dssp SC-CEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTT-EEEEEEGGGTEEEE
T ss_pred CC-CCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCC-EEEEEeCCCCEEEE
Confidence 55 6677777777889999986 6654433211 01246789999 555 67777777788888
Q ss_pred EeCC
Q 046451 335 YNIE 338 (719)
Q Consensus 335 wd~~ 338 (719)
++++
T Consensus 429 i~~e 432 (433)
T 4hw6_A 429 IAPE 432 (433)
T ss_dssp EEEC
T ss_pred EecC
Confidence 8765
No 272
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.36 E-value=7.4e-05 Score=81.02 Aligned_cols=243 Identities=9% Similarity=-0.004 Sum_probs=140.2
Q ss_pred CceeeeecC-CCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC
Q 046451 66 RFNRLAWGK-NGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 66 ~V~~l~~sp-~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
....|+|++ ++ +.|+.+...+.|+.+|+.. ..+..+.........|+|++ ++++|+++..
T Consensus 138 ~P~~lavdp~~~--------g~Lyv~d~~~~I~~id~~~----------~~v~~~~~~~~~P~~ia~d~-~G~~lyvad~ 198 (430)
T 3tc9_A 138 GAVWLSFDPKNH--------NHLYLVGEQHPTRLIDFEK----------EYVSTVYSGLSKVRTICWTH-EADSMIITND 198 (430)
T ss_dssp CCCEEEEETTEE--------EEEEEEEBTEEEEEEETTT----------TEEEEEECCCSCEEEEEECT-TSSEEEEEEC
T ss_pred CCCEEEECCCCC--------CeEEEEeCCCcEEEEECCC----------CEEEEEecCCCCcceEEEeC-CCCEEEEEeC
Confidence 446778886 33 4555555557888888732 23334444456688999999 6775555543
Q ss_pred -CC----cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc
Q 046451 145 -DG----EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR 219 (719)
Q Consensus 145 -dg----~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~ 219 (719)
++ .+.+++.. +..... ..+.. ......+++++++..++++-..++.|+.+|...+.....+.......
T Consensus 199 ~~~~~~~~v~~~~~~-g~~~~~-~~l~~-----~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~ 271 (430)
T 3tc9_A 199 QNNNDRPNNYILTRE-SGFKVI-TELTK-----GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGW 271 (430)
T ss_dssp CSCTTSEEEEEEEGG-GTSCSE-EEEEE-----CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSC
T ss_pred CCCcccceEEEEeCC-Cceeee-eeecc-----CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCc
Confidence 22 23334432 222100 00111 12456788999444677777778899999998765422222123356
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCc---eEEeeCC---------------CCCee-EEEeCC------
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSP---VKEFVGH---------------TKGVI-AMSWCP------ 274 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~---~~~~~~h---------------~~~V~-~v~~sp------ 274 (719)
...|+|+++|++++++..... .|+.+|....... +..+.+. -..-. .++...
T Consensus 272 P~gia~~pdG~~lyv~d~~~~---~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~ 348 (430)
T 3tc9_A 272 EFHIQFHPSGNYAYIVVVNQH---YILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGS 348 (430)
T ss_dssp CEEEEECTTSSEEEEEETTTT---EEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTS
T ss_pred ceeEEEcCCCCEEEEEECCCC---EEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEcccccccc
Confidence 788999999965666655555 8999887532111 1222211 01112 344421
Q ss_pred -CCCCeEEEEeCCCcEEEEECCCCeEEEEecC-----------------CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEe
Q 046451 275 -NDSSYLLTCAKDNRTICWDTVSGEIVSELPA-----------------GTNWNFDIHWYPKIPGVISASSFDGKIGIYN 336 (719)
Q Consensus 275 -~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~-----------------h~~~v~~l~~spdg~~~las~s~Dg~I~iwd 336 (719)
.++.++++-...++|+.+|. +|+....... .-.....|++++++..++++-..+++|+.++
T Consensus 349 D~~g~lyvaD~~n~~I~~i~~-~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~ 427 (430)
T 3tc9_A 349 SDEYDFYFCDRENHCIRILTP-QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIG 427 (430)
T ss_dssp SCCEEEEEEEGGGTEEEEECT-TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEE
T ss_pred CCCCeEEEEECCCcEEEEECC-CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEc
Confidence 13455555566788999984 5654433311 0125789999995336777777778898887
Q ss_pred CC
Q 046451 337 IE 338 (719)
Q Consensus 337 ~~ 338 (719)
++
T Consensus 428 ~e 429 (430)
T 3tc9_A 428 YE 429 (430)
T ss_dssp EC
T ss_pred cC
Confidence 65
No 273
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.36 E-value=2.4e-05 Score=89.96 Aligned_cols=269 Identities=10% Similarity=-0.013 Sum_probs=142.8
Q ss_pred ceEEEEcCCC-----------cEEEEcCCccccCCCCCCCCceeeecc-ccCCEEEEEEeCCCCCEEEEEeC-CCcEEEE
Q 046451 85 GLVAGGLVDG-----------SIDIWNPLSLISSGETGGNPLIAHLSR-HKGPVRGLEFNSFTPNLLASGAD-DGEICIW 151 (719)
Q Consensus 85 ~~lasgs~dg-----------~I~lwd~~~~~~~~~~~~~~~~~~l~~-h~~~V~~l~fsp~~~~~lasgs~-dg~I~iw 151 (719)
++++.|+.+. .+.+||+.+ + .+..+..+.. +.....++++.. ++++++.|+. +..+.+|
T Consensus 199 ~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t------~-~w~~~~~~~~~~~~~~~~~~~~~-~g~lyv~GG~~~~~v~~y 270 (656)
T 1k3i_A 199 RVLMWSSYRNDAFGGSPGGITLTSSWDPST------G-IVSDRTVTVTKHDMFCPGISMDG-NGQIVVTGGNDAKKTSLY 270 (656)
T ss_dssp EEEEEEECCCTTTCSCCCSEEEEEEECTTT------C-CBCCCEEEECSCCCSSCEEEECT-TSCEEEECSSSTTCEEEE
T ss_pred EEEEEecccccccccCCCCeEEEEEEeCCC------C-cEEeCcccCCCCCCccccccCCC-CCCEEEeCCCCCCceEEe
Confidence 6777776442 578899843 2 1133333322 233334466666 7888888884 5689999
Q ss_pred cCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe-CC-----CcEEEEECCCCceeEEe----cCCCCCcee
Q 046451 152 DLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS-YN-----GTTVVWDLKKQKPVISF----SESIKRRCS 221 (719)
Q Consensus 152 dl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s-~d-----g~I~iwd~~~~~~~~~~----~~~~~~~i~ 221 (719)
|..+.+-. .+..+.. .+ .-.++++.+++ ++++.|+ .+ ..+.+||..+.+....- .......-
T Consensus 271 d~~t~~W~-~~~~~~~----~R-~~~s~~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~- 342 (656)
T 1k3i_A 271 DSSSDSWI-PGPDMQV----AR-GYQSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK- 342 (656)
T ss_dssp EGGGTEEE-ECCCCSS----CC-SSCEEEECTTS-CEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT-
T ss_pred cCcCCcee-ECCCCCc----cc-cccceEEecCC-eEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc-
Confidence 98875422 1111111 11 11244455565 5777777 34 57999999876543320 00000000
Q ss_pred EEEECCCCCcEEEEEeCCCC------CCcEEEEecCCCCCceEEeeCCC---------CCeeEEEeCCCCCCeEEEEeCC
Q 046451 222 VLQWNPDVATQLVVASDEDS------SPALRLWDMRNTMSPVKEFVGHT---------KGVIAMSWCPNDSSYLLTCAKD 286 (719)
Q Consensus 222 ~l~~sp~g~~~l~~~s~d~~------~~~I~lwDl~~~~~~~~~~~~h~---------~~V~~v~~sp~d~~~l~sgs~D 286 (719)
...+..++ ++++.++.++. ...+..||..+.. .......+. ..-.++.|...+++++++|+.+
T Consensus 343 ~~~~~~~~-~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~-w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~ 420 (656)
T 1k3i_A 343 QGLYRSDN-HAWLFGWKKGSVFQAGPSTAMNWYYTSGSG-DVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSP 420 (656)
T ss_dssp TGGGTTTC-SCCEEECGGGCEEECCSSSEEEEEECSTTC-EEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBS
T ss_pred cceeecCC-ceEEEECCCCcEEEecCccceeeeecCCcc-eeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCC
Confidence 11222343 34555544321 1267889987643 122221111 1224444443367888888854
Q ss_pred C-----------cEEEEECCCCeEEEEe--cCCCCC-eEEeEEcCCCCCEEEEEeCC-----------CcEEEEeCCCCc
Q 046451 287 N-----------RTICWDTVSGEIVSEL--PAGTNW-NFDIHWYPKIPGVISASSFD-----------GKIGIYNIEGCS 341 (719)
Q Consensus 287 g-----------~I~iwd~~~~~~~~~l--~~h~~~-v~~l~~spdg~~~las~s~D-----------g~I~iwd~~~~~ 341 (719)
+ .|.+||..+.+..... ...... -.++...+++ ++++.|+.+ ..+.+||..+.+
T Consensus 421 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g-~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 421 DYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDG-STFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp SSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTS-CEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCC-CEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 3 6888898776654432 222222 2344667788 788888764 468899988766
Q ss_pred ccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccC
Q 046451 342 RYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPK 381 (719)
Q Consensus 342 ~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~ 381 (719)
........ .+... ...+.+..||++++++.+
T Consensus 500 W~~~~~~~-------~~R~~--hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 500 FYKQNPNS-------IVRVY--HSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEECCCCS-------SCCCT--TEEEEECTTSCEEEEECC
T ss_pred eeecCCCC-------Ccccc--ccHhhcCCCcEEEecCCC
Confidence 54321111 11110 011334469999999864
No 274
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.35 E-value=4.3e-05 Score=86.02 Aligned_cols=176 Identities=9% Similarity=0.027 Sum_probs=99.9
Q ss_pred cEEEEcCCCCCCCCccCCccCC---CCCCCCCeEEEEecCCCC--cEEEEEeCCCcEEEEECCCCceeEEecCCCC----
Q 046451 147 EICIWDLSAPAEPSHFPPLRGN---GSAAQGEISFVSWNSKVQ--HILASTSYNGTTVVWDLKKQKPVISFSESIK---- 217 (719)
Q Consensus 147 ~I~iwdl~~~~~~~~~~~l~~~---~~~h~~~I~~l~~sp~g~--~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~---- 217 (719)
.|..+|..+++....+...... .......+. +....+|. ++++.++.+|.++++|.++++.+..+.....
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 5999999988865443211000 001112221 22223543 3677889999999999999998877652210
Q ss_pred --------Cce--------------------------eEEEECCCCCcEEEEEeC-------------------------
Q 046451 218 --------RRC--------------------------SVLQWNPDVATQLVVASD------------------------- 238 (719)
Q Consensus 218 --------~~i--------------------------~~l~~sp~g~~~l~~~s~------------------------- 238 (719)
..+ ..++++|+...+++...+
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 111 235677776544443221
Q ss_pred ----C----CCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCC-
Q 046451 239 ----E----DSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNW- 309 (719)
Q Consensus 239 ----d----~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~- 309 (719)
. ...+.|..||+.++ +.+-++... ..+....+.. .+.+++.++.||.|++||.++|+.+.+++.....
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG-~~~W~~~~~-~~~~~~~~~t-~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~ 508 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTG-KAKWTKWEK-FAAWGGTLYT-KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGI 508 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTC-CEEEEEEES-SCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred ccCccccCCCCCCeEEEEECCCC-CEEEEecCC-CCccceeEEE-CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcE
Confidence 0 11247999999876 333333321 2222222222 4567778999999999999999999988754321
Q ss_pred eEEeEEcCCCCCEEEEE
Q 046451 310 NFDIHWYPKIPGVISAS 326 (719)
Q Consensus 310 v~~l~~spdg~~~las~ 326 (719)
..-+.+..+|..++++.
T Consensus 509 ~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 509 GSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp SCCEEEEETTEEEEEEE
T ss_pred eeeEEEEECCEEEEEEE
Confidence 12234556663344333
No 275
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.35 E-value=1.5e-05 Score=78.99 Aligned_cols=194 Identities=10% Similarity=-0.018 Sum_probs=128.0
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC
Q 046451 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM 254 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~ 254 (719)
....|.|+. ..++++.+.+|.|+++|+++++.+.++ ......-..+++. ++.++++...++ .+.+||..+.
T Consensus 56 ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~--g~~Ly~ltw~~~---~v~V~D~~Tl- 126 (268)
T 3nok_A 56 FTQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASD--GERLYQLTWTEG---LLFTWSGMPP- 126 (268)
T ss_dssp CEEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEEC--SSCEEEEESSSC---EEEEEETTTT-
T ss_pred ccceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEe--CCEEEEEEccCC---EEEEEECCcC-
Confidence 456788874 368888888999999999999988877 2332222345554 446666666665 8999999875
Q ss_pred CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC-----CCeEEeEEcCCCCCEEEEEeCC
Q 046451 255 SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGT-----NWNFDIHWYPKIPGVISASSFD 329 (719)
Q Consensus 255 ~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~-----~~v~~l~~spdg~~~las~s~D 329 (719)
+.+.++..... -..+++ |++.|+.+..+++|.++|..+.+.+.++.... ..++.+.|. +| .+++....+
T Consensus 127 ~~~~ti~~~~e-GwGLt~---Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lyanvw~s 200 (268)
T 3nok_A 127 QRERTTRYSGE-GWGLCY---WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG-VIYANIWHS 200 (268)
T ss_dssp EEEEEEECSSC-CCCEEE---ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTC
T ss_pred cEEEEEeCCCc-eeEEec---CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC-EEEEEECCC
Confidence 56666664322 244553 56777777779999999999999888876422 245678887 66 577666678
Q ss_pred CcEEEEeCCCCcccccCCCC-CCC-CCccCcceecCCCceeeeeCCcEEEEccCCC
Q 046451 330 GKIGIYNIEGCSRYGVGDSN-FSA-APLRAPKWYKRPAGASFGFGGKLVSFHPKSS 383 (719)
Q Consensus 330 g~I~iwd~~~~~~~~~~~~~-~~~-~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~ 383 (719)
+.|.+.|..+++.+...+-. +.. .......-.....|+++..+++.+.+..+.+
T Consensus 201 ~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~W 256 (268)
T 3nok_A 201 SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLW 256 (268)
T ss_dssp SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTC
T ss_pred CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCC
Confidence 89999999999987632211 000 0000000011236789988877666655444
No 276
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.34 E-value=0.00012 Score=75.92 Aligned_cols=254 Identities=11% Similarity=-0.007 Sum_probs=138.6
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCccccee-----ecccCCCCCceeeeecC-CCCCCCC
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLL-----VGESPSSERFNRLAWGK-NGSGSED 81 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~V~~l~~sp-~g~~~~~ 81 (719)
....+++|+++|++|.++..++.|..+....+.++.|........... . ...........+|++.+ ++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~p~gi~~~~~~g----- 92 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAF-CENSTDAEKRPLCGRTYDISYNLQNN----- 92 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHH-HTTCCCGGGHHHHCCEEEEEEETTTT-----
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccc-cccccchhccccCCCCceEEEcCCCC-----
Confidence 456789999999978888777766433223333444432110000000 0 00000123567899987 54
Q ss_pred CccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec----c-ccCCEEEEEEeCCCCCEEEEEeC------------
Q 046451 82 FSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS----R-HKGPVRGLEFNSFTPNLLASGAD------------ 144 (719)
Q Consensus 82 ~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~----~-h~~~V~~l~fsp~~~~~lasgs~------------ 144 (719)
.|+.+...+.|.++|... + . +..+. + .......+++.+.+++++++-..
T Consensus 93 ----~l~v~d~~~~i~~~d~~~------g---~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 93 ----QLYIVDCYYHLSVVGSEG------G---H-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp ----EEEEEETTTEEEEECTTC------E---E-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred ----cEEEEECCCCEEEEeCCC------C---E-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceeh
Confidence 455554445588888632 1 1 11111 1 12346788888733455554322
Q ss_pred -----CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc--eeEEecCCCC
Q 046451 145 -----DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK--PVISFSESIK 217 (719)
Q Consensus 145 -----dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~~~~ 217 (719)
++.|..||..+++.... ... -.....|+|++++..++++-+.++.|.+|++.... ....+.. ..
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~---~~~-----~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~ 229 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLL---LKE-----LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IP 229 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEE---EEE-----ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CS
T ss_pred cccCCCceEEEEeCCCCEEEEe---ccC-----CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CC
Confidence 36788888765432111 010 11345799999975455555667899999987531 1122221 22
Q ss_pred CceeEEEECCCCCcEEEEEeCC-------CCCCcEEEEecCCCCCceEEeeCC----CCCeeEEEeCCCCCCeEEEEeCC
Q 046451 218 RRCSVLQWNPDVATQLVVASDE-------DSSPALRLWDMRNTMSPVKEFVGH----TKGVIAMSWCPNDSSYLLTCAKD 286 (719)
Q Consensus 218 ~~i~~l~~sp~g~~~l~~~s~d-------~~~~~I~lwDl~~~~~~~~~~~~h----~~~V~~v~~sp~d~~~l~sgs~D 286 (719)
. ...++++++|. ++++.... +..+.|..+|.. .+.+..+... ...+.++++. +++++++...+
T Consensus 230 g-P~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~--G~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~ 303 (322)
T 2fp8_A 230 N-PGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEF--GNILEVIPLPPPFAGEHFEQIQEH--DGLLYIGTLFH 303 (322)
T ss_dssp S-EEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTT--SCEEEEEECCTTTTTSCCCEEEEE--TTEEEEECSSC
T ss_pred C-CCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCC--CCEEEEEECCCCCccccceEEEEe--CCEEEEeecCC
Confidence 3 78899999985 55554431 001168888864 3455555433 2356677763 56666666678
Q ss_pred CcEEEEECCC
Q 046451 287 NRTICWDTVS 296 (719)
Q Consensus 287 g~I~iwd~~~ 296 (719)
+.|.++++..
T Consensus 304 ~~i~~~~~~~ 313 (322)
T 2fp8_A 304 GSVGILVYDK 313 (322)
T ss_dssp SEEEEEEC--
T ss_pred CceEEEeccc
Confidence 8899998753
No 277
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.34 E-value=7.1e-05 Score=74.45 Aligned_cols=198 Identities=8% Similarity=0.093 Sum_probs=128.8
Q ss_pred CCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC
Q 046451 173 QGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN 252 (719)
Q Consensus 173 ~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~ 252 (719)
...+..++|++++..++++...++.|...|.. ++.+..+..........|++..++ .++++.-.++ .+.++++..
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g-~~~vs~E~~~---~l~~~~v~~ 100 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDN-QFVISDERDY---AIYVISLTP 100 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTT-EEEEEETTTT---EEEEEEECT
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCC-EEEEEECCCC---cEEEEEcCC
Confidence 34799999999876677778889999999998 888887753344678899999887 3444433333 799998865
Q ss_pred CCC--ceEEee------CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC---CCeEEEEec-------CCCCCeEEeE
Q 046451 253 TMS--PVKEFV------GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV---SGEIVSELP-------AGTNWNFDIH 314 (719)
Q Consensus 253 ~~~--~~~~~~------~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~---~~~~~~~l~-------~h~~~v~~l~ 314 (719)
... .+.... ........|+|++ +++.|+++.+.....||.+. ....+..+. .+...+.+++
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEET-TTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeC-CCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 443 112221 1344668999999 66666666655555555543 111112121 1234578999
Q ss_pred EcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEc
Q 046451 315 WYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFH 379 (719)
Q Consensus 315 ~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~ 379 (719)
++|....+++.....+.|.++|.... .+.... +....-...+....+.|++|..+|.+++.+
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~--L~~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVGE-VIGEMS--LTKGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCC-EEEEEE--CSTTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEE--cCCccCCcccccCCCCeeEECCCCCEEEEc
Confidence 99988778888888899999998865 322110 110000112345677899999999987765
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.33 E-value=0.00016 Score=75.01 Aligned_cols=235 Identities=9% Similarity=0.026 Sum_probs=140.1
Q ss_pred CceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCcee
Q 046451 38 SANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIA 117 (719)
Q Consensus 38 ~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~ 117 (719)
...|+.++++.......+.+ . .......++|.+.+. .++.+-...+.|..+++.. .. ....
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~-~---~~~~~~~ld~d~~~~-------~lyw~D~~~~~I~r~~~~g------~~--~~~~ 72 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVV-G---GLEDAAAVDFVFSHG-------LIYWSDVSEEAIKRTEFNK------TE--SVQN 72 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEE-E---EEEEEEEEEEEGGGT-------EEEEEETTTTEEEEEETTS------SS--CCCE
T ss_pred cCeEEEEECCCCceEEEEEe-c---CCCccEEEEEEeCCC-------EEEEEECCCCcEEEEEccC------CC--ceEE
Confidence 34456677664432222211 1 123466899987542 5666666778899998742 10 1111
Q ss_pred eeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe-CCC
Q 046451 118 HLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS-YNG 196 (719)
Q Consensus 118 ~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s-~dg 196 (719)
.+...-.....+++.+.+++++++-...+.|.+++++.... ..+ +. ........+++++.++.++++-. ..+
T Consensus 73 ~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l--~~----~~~~~P~giavdp~~g~ly~td~~~~~ 145 (318)
T 3sov_A 73 VVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-KVL--FW----QELDQPRAIALDPSSGFMYWTDWGEVP 145 (318)
T ss_dssp EEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEE--EC----SSCSSEEEEEEEGGGTEEEEEECSSSC
T ss_pred EEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE-EEE--Ee----CCCCCccEEEEeCCCCEEEEEecCCCC
Confidence 22222345668888875666667766778999999875432 221 11 12235789999987654555442 357
Q ss_pred cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCC
Q 046451 197 TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPND 276 (719)
Q Consensus 197 ~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d 276 (719)
.|..+++..... ..+....-.....|+|++++..++++-...+ .|..+|+... .....+.+.......+++. .
T Consensus 146 ~I~r~~~dG~~~-~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~---~I~~~d~dG~-~~~~~~~~~~~~P~glav~--~ 218 (318)
T 3sov_A 146 KIERAGMDGSSR-FIIINSEIYWPNGLTLDYEEQKLYWADAKLN---FIHKSNLDGT-NRQAVVKGSLPHPFALTLF--E 218 (318)
T ss_dssp EEEEEETTSCSC-EEEECSSCSCEEEEEEETTTTEEEEEETTTT---EEEEEETTSC-SCEEEECSCCSCEEEEEEE--T
T ss_pred EEEEEEcCCCCe-EEEEECCCCCccEEEEeccCCEEEEEECCCC---EEEEEcCCCC-ceEEEecCCCCCceEEEEe--C
Confidence 899998874332 3332123456689999998766666655555 8999998643 2222223334556677774 3
Q ss_pred CCeEEEEeCCCcEEEEECCCCeEEEEecC
Q 046451 277 SSYLLTCAKDNRTICWDTVSGEIVSELPA 305 (719)
Q Consensus 277 ~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~ 305 (719)
+.++++-...+.|..+|..+|+.+..+..
T Consensus 219 ~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 219 DILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp TEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CEEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 45555655678899999888876655544
No 279
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.31 E-value=0.00014 Score=74.90 Aligned_cols=234 Identities=14% Similarity=0.112 Sum_probs=125.4
Q ss_pred CccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceE
Q 046451 8 NRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLV 87 (719)
Q Consensus 8 ~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~l 87 (719)
.....++|+++|+++++-..++.| ..||.+. .. ... ........+|++.+++ +++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I----------~~~d~~g--~~--~~~---~~~~~~p~gia~~~dG--------~l~ 86 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEI----------VSITPDG--NQ--QIH---ATVEGKVSGLAFTSNG--------DLV 86 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEE----------EEECTTC--CE--EEE---EECSSEEEEEEECTTS--------CEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeE----------EEECCCC--ce--EEE---EeCCCCceeEEEcCCC--------cEE
Confidence 456788999999866665455544 4444331 11 101 1123467899999987 555
Q ss_pred EEEcCC-C-cEEEEcCCccccCCCCCCCCceeeec-cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCC-CCCcc-
Q 046451 88 AGGLVD-G-SIDIWNPLSLISSGETGGNPLIAHLS-RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPA-EPSHF- 162 (719)
Q Consensus 88 asgs~d-g-~I~lwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~-~~~~~- 162 (719)
++.... + .|..+|. .++ +...... ........+++.. ++..+++-..++.|+++|..+.. .+...
T Consensus 87 vad~~~~~~~v~~~d~------~~g---~~~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~ 156 (306)
T 2p4o_A 87 ATGWNADSIPVVSLVK------SDG---TVETLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEH 156 (306)
T ss_dssp EEEECTTSCEEEEEEC------TTS---CEEEEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEeccCCcceEEEEcC------CCC---eEEEEEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEEC
Confidence 554332 2 4666665 223 2211111 1122234455444 44445554468899999976531 11000
Q ss_pred CCccC-CCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC-Cce--eEEecCCCCCceeEEEECCCCCcEEEEEeC
Q 046451 163 PPLRG-NGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK-QKP--VISFSESIKRRCSVLQWNPDVATQLVVASD 238 (719)
Q Consensus 163 ~~l~~-~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~-~~~--~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~ 238 (719)
..+.. .....-...+.| ++++..++++-...++|.+||+.. ++. ...+. .......++++++| +++++...
T Consensus 157 ~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~--~~~~P~gi~vd~dG-~l~va~~~ 231 (306)
T 2p4o_A 157 PMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV--EQTNIDDFAFDVEG-NLYGATHI 231 (306)
T ss_dssp GGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE--ESCCCSSEEEBTTC-CEEEECBT
T ss_pred CccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe--ccCCCCCeEECCCC-CEEEEeCC
Confidence 00000 000111234555 667655666667788999999875 321 11221 12356778999998 45655555
Q ss_pred CCCCCcEEEEecCCCCCceE--EeeCCCCCeeEEEeC---CCCCCeEEEEeCCC
Q 046451 239 EDSSPALRLWDMRNTMSPVK--EFVGHTKGVIAMSWC---PNDSSYLLTCAKDN 287 (719)
Q Consensus 239 d~~~~~I~lwDl~~~~~~~~--~~~~h~~~V~~v~~s---p~d~~~l~sgs~Dg 287 (719)
.+ .|.++|.. + +... .+.......++++|. + +++.|++++..+
T Consensus 232 ~~---~V~~~~~~-G-~~~~~~~~~~~~~~p~~~a~~g~~~-d~~~LyVt~~~~ 279 (306)
T 2p4o_A 232 YN---SVVRIAPD-R-STTIIAQAEQGVIGSTAVAFGQTEG-DCTAIYVVTNGG 279 (306)
T ss_dssp TC---CEEEECTT-C-CEEEEECGGGTCTTEEEEEECCSTT-TTTEEEEEECTT
T ss_pred CC---eEEEECCC-C-CEEEEeecccccCCceEEEEecccC-CCCEEEEECCCC
Confidence 55 79999975 2 3221 233333568999998 7 666666555443
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.31 E-value=0.00016 Score=77.48 Aligned_cols=190 Identities=12% Similarity=-0.032 Sum_probs=122.0
Q ss_pred EEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC----ceeEEec
Q 046451 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ----KPVISFS 213 (719)
Q Consensus 138 ~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~----~~~~~~~ 213 (719)
+|+.+. ...|+..|+........+ .....+..|+|++.++.++++-..++.|+.+++... .....+.
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~--------~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~ 155 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLI--------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 155 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEE--------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC
T ss_pred eeEEec-cceeEEEccCCcceeEec--------cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe
Confidence 444443 467888888765433221 123368899999876666666667889999998752 2222222
Q ss_pred CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe-C-CCcEEE
Q 046451 214 ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA-K-DNRTIC 291 (719)
Q Consensus 214 ~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs-~-Dg~I~i 291 (719)
........|+++..+..++++-...+ .|.+.|+... .....+.........|++.| .+.+|+... . .+.|..
T Consensus 156 -~~~~~p~glavD~~~~~lY~~d~~~~---~I~~~~~~g~-~~~~l~~~~~~~P~~iavdp-~~g~ly~td~~~~~~I~~ 229 (400)
T 3p5b_L 156 -RDIQAPDGLAVDWIHSNIYWTDSVLG---TVSVADTKGV-KRKTLFRENGSKPRAIVVDP-VHGFMYWTDWGTPAKIKK 229 (400)
T ss_dssp -SSCSCEEEEEEETTTTEEEEEETTTT---EEEEECTTTC-SEEEEEECSSCCEEEEEEET-TTTEEEEEECSSSCCEEE
T ss_pred -CCCCCcccEEEEecCCceEEEECCCC---eEEEEeCCCC-ceEEEEeCCCCCcceEEEec-ccCeEEEEeCCCCCEEEE
Confidence 34456788999886656666665555 8999998643 22233333445678999998 445554444 2 478999
Q ss_pred EECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 292 WDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 292 wd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
.++........+...-.+...|+|++++..+.++-...++|..+|+++...
T Consensus 230 ~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 230 GGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 280 (400)
T ss_dssp EETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC
T ss_pred EeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc
Confidence 998644333333344467899999988756666666678999999977544
No 281
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.29 E-value=0.00014 Score=84.53 Aligned_cols=235 Identities=11% Similarity=-0.029 Sum_probs=142.2
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCC---CCcc
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAE---PSHF 162 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~---~~~~ 162 (719)
+|+... ...|+..++.. . . ...+......+..|+|+..++.++++-...+.|+.+++..... ...+
T Consensus 397 ~Ll~an-~~~Ir~i~l~~------~---~-~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~v 465 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDR------S---E-YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV 465 (791)
T ss_dssp EEEEEC-BSSEEEECTTS------C---C-CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE
T ss_pred cccccc-ccceeEeeccC------C---c-ceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEE
Confidence 344333 45677777732 1 2 2233334567789999985555666666778899999875321 1111
Q ss_pred CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCC
Q 046451 163 PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSS 242 (719)
Q Consensus 163 ~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~ 242 (719)
+.. .......|+++..+++++++-...+.|.+.++........+. ........|++++.+.+++++-....
T Consensus 466 --i~~----~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~-~~l~~P~gIaVDp~~g~LYwtD~g~~-- 536 (791)
T 3m0c_C 466 --ISR----DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTP-- 536 (791)
T ss_dssp --ECS----SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-CTTCCEEEEEEETTTTEEEEEECSSS--
T ss_pred --Eec----CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe-CCCCCcceEEEecCCCCEEEecCCCC--
Confidence 111 122456788887776777777788999999998654433333 34456889999998656666554331
Q ss_pred CcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC--CCCCeEEeEEcCCCC
Q 046451 243 PALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA--GTNWNFDIHWYPKIP 320 (719)
Q Consensus 243 ~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~--h~~~v~~l~~spdg~ 320 (719)
+.|.+.++... .....+.........|++.+.+++++++-...+.|..+|+........+.. ......+|++..+
T Consensus 537 ~~I~~~~~dG~-~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-- 613 (791)
T 3m0c_C 537 AKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-- 613 (791)
T ss_dssp CEEEEEETTSC-CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT--
T ss_pred CeEEEEecCCC-ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC--
Confidence 27889988643 222233333457889999973444444445667899999864433333332 2234567777433
Q ss_pred CEEEEEeCCCcEEEEeCCCCccc
Q 046451 321 GVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 321 ~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
+++++-...+.|...|..+++.+
T Consensus 614 ~lYwtD~~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 614 KVFWTDIINEAIFSANRLTGSDV 636 (791)
T ss_dssp EEEEEETTTTEEEEEETTTCCCC
T ss_pred EEEEEECCCCEEEEEeCCCCcce
Confidence 56777667788888887666543
No 282
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.28 E-value=0.0018 Score=75.86 Aligned_cols=245 Identities=10% Similarity=0.011 Sum_probs=143.6
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec--------cccCCEEEEEEeCCCC
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS--------RHKGPVRGLEFNSFTP 136 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~--------~h~~~V~~l~fsp~~~ 136 (719)
..|.++....++ .|..|+.++-|..||... + . +..+. .....|.++.... ++
T Consensus 163 ~~i~~i~~d~~g---------~lwigt~~~Gl~~~~~~~------~---~-~~~~~~~~~~~~~l~~~~i~~i~~d~-~g 222 (781)
T 3v9f_A 163 EQTWTATEAEDG---------KLYIGHVEGGLSILSLND------K---S-VKHFVHDPQNPNSLPGNDVRCIYKDT-NG 222 (781)
T ss_dssp CCEEEEEEEETT---------EEEEEETTTEEEEEETTT------T---E-EEEECC--------CCSSEEEEEECT-TC
T ss_pred cceEEEEECCCC---------CEEEEecCCCeEEEcCCC------C---c-eEeeecCCCCcccCCCCceeEEEEcC-CC
Confidence 457788776664 566676665688888632 1 1 11111 1135688888766 44
Q ss_pred CEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec---
Q 046451 137 NLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS--- 213 (719)
Q Consensus 137 ~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~--- 213 (719)
+ |..|+.+ -|.+||..+.+..................|.++....+| .|..|+..+-|.++|..+++......
T Consensus 223 ~-lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~~~~~~f 298 (781)
T 3v9f_A 223 N-IWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDN--KLWIATELNGIMILDLQQNQFLLPEQIRF 298 (781)
T ss_dssp C-EEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTS--EEEEEESSSCEEEEETTCC---------C
T ss_pred C-EEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCC--CEEEEeCCCCeEEECCCCCeeeeeecccc
Confidence 4 4445555 688999765432211000000001124479999988876 46667775668999987765322110
Q ss_pred ----------CCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEee----------CCCCCeeEEEeC
Q 046451 214 ----------ESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFV----------GHTKGVIAMSWC 273 (719)
Q Consensus 214 ----------~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~----------~h~~~V~~v~~s 273 (719)
......|.++..+.+|. |.+|+.++ -|..|+..... ...+. .....|.++...
T Consensus 299 ~~~~~~~~~~~l~~~~v~~i~~D~~g~--lWigt~~~---Gl~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~v~~i~~d 371 (781)
T 3v9f_A 299 EFIREGDNNYSLSNASARYIFQDSFNN--IWIGTWGG---GINFISNAPPT--FHTWSYSPTQMNESSLSNKVVSSVCDD 371 (781)
T ss_dssp EEECBCSSTTSBSSSCEEEEEECSSCC--EEEEEBSS---CEEEECSSCCS--CEEEC----CCCSSCCSSSCEEEEEEC
T ss_pred ccccCCCCCCCCCCCeEEEEEEeCCCC--EEEEecCC---eEEEeCCCCCc--ceeeccCccccccCCCCCcceEEEEEc
Confidence 02345789999998873 55555443 38999876532 22221 123568888887
Q ss_pred CCCCCeEEEEeCCCcEEEEECCCCeEEEEe---cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 274 PNDSSYLLTCAKDNRTICWDTVSGEIVSEL---PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 274 p~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l---~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
. ++. |..|+.++-|.+||..+++..... ......|.++....++ .+. .|+.++.|.+||..+++...
T Consensus 372 ~-~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~lW-igt~~~Gl~~~~~~~~~~~~ 441 (781)
T 3v9f_A 372 G-QGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEG-NLW-FGTYLGNISYYNTRLKKFQI 441 (781)
T ss_dssp T-TSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTS-CEE-EEETTEEEEEECSSSCEEEE
T ss_pred C-CCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCC-CEE-EEeccCCEEEEcCCCCcEEE
Confidence 6 544 666777777999998655432211 1234568999988887 444 46666789999988776543
No 283
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.25 E-value=0.00094 Score=69.37 Aligned_cols=277 Identities=11% Similarity=0.020 Sum_probs=142.7
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecc--cCCCCCceeeeecCCCCCCCCCcc
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGE--SPSSERFNRLAWGKNGSGSEDFSL 84 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~--~~~~~~V~~l~~sp~g~~~~~~~~ 84 (719)
...+.+|.|..++..+|+| ..|.| |....+ ......... ......+.+|.|.+ +
T Consensus 35 ~~~~~~v~~~~~~~~~~~G-~~g~i------------~~s~Dg--G~tW~~~~~~~~~~~~~~~~i~~~~-~-------- 90 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVG-VNATL------------METRDG--GQTWEPRTLVLDHSDYRFNSVSFQG-N-------- 90 (327)
T ss_dssp SSCEEEEEESSSSCEEEEE-TTTEE------------EEESST--TSSCEECCCCCSCCCCEEEEEEEET-T--------
T ss_pred CCcEEEEEECCCCcEEEEc-CCCeE------------EEeCCC--CCCCeECCCCCCCCCccEEEEEecC-C--------
Confidence 3568889998888888765 34533 222111 111111111 11244678898875 2
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
..++++ .+|.|..-+ ..+..+..+.....+.+.+..|.+.. ++..++++ .+|.|+.- .+.++....+
T Consensus 91 ~~~~~g-~~g~i~~S~-------DgG~tW~~~~~~~~~~~~~~~i~~~~-~~~~~~~~-~~g~v~~S-~DgG~tW~~~-- 157 (327)
T 2xbg_A 91 EGWIVG-EPPIMLHTT-------DGGQSWSQIPLDPKLPGSPRLIKALG-NGSAEMIT-NVGAIYRT-KDSGKNWQAL-- 157 (327)
T ss_dssp EEEEEE-ETTEEEEES-------STTSSCEECCCCTTCSSCEEEEEEEE-TTEEEEEE-TTCCEEEE-SSTTSSEEEE--
T ss_pred eEEEEE-CCCeEEEEC-------CCCCCceECccccCCCCCeEEEEEEC-CCCEEEEe-CCccEEEE-cCCCCCCEEe--
Confidence 445544 456444321 22322222222212345577888765 45555544 56655332 2223333221
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
. ......+..+.+.+++ .+++++ .+|.++.-+-..++.-..+.......+..+.+.+++. ++ +.+.++ .
T Consensus 158 -~---~~~~~~~~~~~~~~~~-~~~~~g-~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~-~~-~~~~~G---~ 226 (327)
T 2xbg_A 158 -V---QEAIGVMRNLNRSPSG-EYVAVS-SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR-LW-MIVNGG---K 226 (327)
T ss_dssp -E---CSCCCCEEEEEECTTS-CEEEEE-TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSC-EE-EEETTT---E
T ss_pred -e---cCCCcceEEEEEcCCC-cEEEEE-CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCC-EE-EEeCCc---e
Confidence 1 1233478899999886 455554 4555544331112222222223566788999998873 44 444555 6
Q ss_pred EEEEecCCCCCceEEee----CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecC---CCCCeEEeEEcC
Q 046451 245 LRLWDMRNTMSPVKEFV----GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPA---GTNWNFDIHWYP 317 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~----~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~---h~~~v~~l~~sp 317 (719)
+++.+...+ +....+. .+...+.++.+.+ ++.++++ +.+|.| ++..+.|+.-..+.. ....+.++.|..
T Consensus 227 ~~~s~~D~G-~tW~~~~~~~~~~~~~~~~v~~~~-~~~~~~~-g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~ 302 (327)
T 2xbg_A 227 IAFSDPDNS-ENWGELLSPLRRNSVGFLDLAYRT-PNEVWLA-GGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFS 302 (327)
T ss_dssp EEEEETTEE-EEECCCBCTTSSCCSCEEEEEESS-SSCEEEE-ESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEE
T ss_pred EEEecCCCC-CeeEeccCCcccCCcceEEEEecC-CCEEEEE-eCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEEC
Confidence 776632111 1111111 1224588999987 6665555 457766 445555554444432 234578898975
Q ss_pred CCCCEEEEEeCCCcEEEEeC
Q 046451 318 KIPGVISASSFDGKIGIYNI 337 (719)
Q Consensus 318 dg~~~las~s~Dg~I~iwd~ 337 (719)
++ .+++++.+|.|.-++-
T Consensus 303 ~~--~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 303 PD--QGFILGQKGILLRYVT 320 (327)
T ss_dssp TT--EEEEECSTTEEEEECC
T ss_pred CC--ceEEEcCCceEEEEcC
Confidence 54 4666667897776653
No 284
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.23 E-value=2.6e-05 Score=89.69 Aligned_cols=288 Identities=10% Similarity=-0.034 Sum_probs=147.1
Q ss_pred ceEEEcC-CCCeEEEeeccceeec-ccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEE
Q 046451 11 ASVAFAP-DAPYMAAGTMAGAVDL-SFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVA 88 (719)
Q Consensus 11 ~~vafSp-dg~~Latgs~dG~v~v-~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~la 88 (719)
.++++.+ +|++++.|+.++.-.- .......+.+||...+.-.....+ ...+.....++++..++ .+++
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~--~~~~~~~~~~~~~~~~g--------~lyv 258 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT--VTKHDMFCPGISMDGNG--------QIVV 258 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEE--ECSCCCSSCEEEECTTS--------CEEE
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCccc--CCCCCCccccccCCCCC--------CEEE
Confidence 3667777 8898888876542100 000112567788776543321111 11122233346777776 6788
Q ss_pred EEc-CCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEe-CC-----CcEEEEcCCCCCCCCc
Q 046451 89 GGL-VDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGA-DD-----GEICIWDLSAPAEPSH 161 (719)
Q Consensus 89 sgs-~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs-~d-----g~I~iwdl~~~~~~~~ 161 (719)
.|+ .++.+.+||..+.. . ..+..+...... .++.+.+ ++++++.|+ .+ ..+.+||..+..-...
T Consensus 259 ~GG~~~~~v~~yd~~t~~----W---~~~~~~~~~R~~-~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 259 TGGNDAKKTSLYDSSSDS----W---IPGPDMQVARGY-QSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp ECSSSTTCEEEEEGGGTE----E---EECCCCSSCCSS-CEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred eCCCCCCceEEecCcCCc----e---eECCCCCccccc-cceEEec-CCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 877 45689999984311 1 111112111111 2344545 678888888 34 5699999987542211
Q ss_pred ----cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC---------CcEEEEECCCCceeEEecCCC--------CCce
Q 046451 162 ----FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN---------GTTVVWDLKKQKPVISFSESI--------KRRC 220 (719)
Q Consensus 162 ----~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d---------g~I~iwd~~~~~~~~~~~~~~--------~~~i 220 (719)
...+.. ..+. ..+..++ ++++.++.+ ..+..||..+........... ...-
T Consensus 330 ~~~~~~p~~~--~~~~-----~~~~~~~-~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~ 401 (656)
T 1k3i_A 330 PNAKVNPMLT--ADKQ-----GLYRSDN-HAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCG 401 (656)
T ss_dssp TTSCSGGGCC--CCTT-----GGGTTTC-SCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTC
T ss_pred CCcccccccc--cccc-----ceeecCC-ceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCC
Confidence 000110 0000 1112222 344444433 457788988766443322111 1123
Q ss_pred eEEEECCCCCcEEEEEeCCCC-----CC---cEEEEecCCCCCceEEe--eCCCCCe-eEEEeCCCCCCeEEEEeCC---
Q 046451 221 SVLQWNPDVATQLVVASDEDS-----SP---ALRLWDMRNTMSPVKEF--VGHTKGV-IAMSWCPNDSSYLLTCAKD--- 286 (719)
Q Consensus 221 ~~l~~sp~g~~~l~~~s~d~~-----~~---~I~lwDl~~~~~~~~~~--~~h~~~V-~~v~~sp~d~~~l~sgs~D--- 286 (719)
.++.|...+.++++.|+.++. .. .|.+||..+.. -.... ..+.... .+++..+ +++++++|+.+
T Consensus 402 ~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~-W~~~~~~~mp~~R~~~~~~~l~-~g~i~v~GG~~~~~ 479 (656)
T 1k3i_A 402 NAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSP-NTVFASNGLYFARTFHTSVVLP-DGSTFITGGQRRGI 479 (656)
T ss_dssp EEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCC-EEEECTTCCSSCCBSCEEEECT-TSCEEEECCBSBCC
T ss_pred ceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCC-eeEEccCCCCCCcccCCeEECC-CCCEEEECCcccCc
Confidence 444554433467777775321 11 47788876532 11111 1122222 3445566 78999998864
Q ss_pred --------CcEEEEECCCCeEEEE--ecCCCCCeEEeEEcCCCCCEEEEEeC
Q 046451 287 --------NRTICWDTVSGEIVSE--LPAGTNWNFDIHWYPKIPGVISASSF 328 (719)
Q Consensus 287 --------g~I~iwd~~~~~~~~~--l~~h~~~v~~l~~spdg~~~las~s~ 328 (719)
..+.+||..+++-... +...........+.+++ ++++.|+.
T Consensus 480 ~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg-~v~v~GG~ 530 (656)
T 1k3i_A 480 PFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDG-RVFNGGGG 530 (656)
T ss_dssp TTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTS-CEEEEECC
T ss_pred CcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCc-EEEecCCC
Confidence 5689999977654321 22222223345567888 78888885
No 285
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.19 E-value=7.8e-05 Score=87.02 Aligned_cols=199 Identities=12% Similarity=0.059 Sum_probs=115.7
Q ss_pred CEEEEEEe-CCCCCEEEEEe-CCC----cEEEEcCCCC-CCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC--
Q 046451 125 PVRGLEFN-SFTPNLLASGA-DDG----EICIWDLSAP-AEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN-- 195 (719)
Q Consensus 125 ~V~~l~fs-p~~~~~lasgs-~dg----~I~iwdl~~~-~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d-- 195 (719)
.+...+|| | |+++|+.+. .+| .|+++|+.++ +.+.. .+. .....++|+++|+.++++...+
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~~-------~~~~~~~WspDg~~l~y~~~d~~~ 244 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KVS-------GTNGEIVWGPDHTSLFYVTKDETL 244 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CEE-------EECSCCEECSSTTEEEEEEECTTC
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--ccc-------CceeeEEEecCCCEEEEEEECCCC
Confidence 57789999 9 777776543 333 4999999987 53211 011 1234688999986555544321
Q ss_pred --CcEEEEECCCCce--eEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCce--EEee-CCCCCee
Q 046451 196 --GTTVVWDLKKQKP--VISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPV--KEFV-GHTKGVI 268 (719)
Q Consensus 196 --g~I~iwd~~~~~~--~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~--~~~~-~h~~~V~ 268 (719)
..|+++++.++.. ...+..........+.|++||+.++++.... ....|+++|+.+..... ..+. .......
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~ 323 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP-ETAEVHLLDLRKGNAHNTLEIVRPREKGVRY 323 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECS-SCEEEEEEESSSCTTCCCEEESSCCCTTCCE
T ss_pred CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCC-CCceEEEEECCCCCCCceeEEeecCCCCceE
Confidence 3688899887642 2333322334567889999997666665433 23478899997653222 3333 3344556
Q ss_pred EEEeCCCCCCeEEEEeCC----CcEEEEECCCCeEEEE-ecCCCC--CeEEeEEcCCCCCEEEEEeCCCcEE--EEeC
Q 046451 269 AMSWCPNDSSYLLTCAKD----NRTICWDTVSGEIVSE-LPAGTN--WNFDIHWYPKIPGVISASSFDGKIG--IYNI 337 (719)
Q Consensus 269 ~v~~sp~d~~~l~sgs~D----g~I~iwd~~~~~~~~~-l~~h~~--~v~~l~~spdg~~~las~s~Dg~I~--iwd~ 337 (719)
++.|+. ++.+++....+ ..|.++|+.++..... +..+.. .+.++.+. +..++++...|+..+ ++++
T Consensus 324 s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 324 DVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEEEEC
T ss_pred EEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEEEec
Confidence 666654 44445554443 3677778765221122 222322 35566665 436888888888655 4554
No 286
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.18 E-value=1.7e-05 Score=91.61 Aligned_cols=185 Identities=12% Similarity=-0.041 Sum_probs=111.4
Q ss_pred CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC----CceeEEecCCCCCc
Q 046451 144 DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK----QKPVISFSESIKRR 219 (719)
Q Consensus 144 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~----~~~~~~~~~~~~~~ 219 (719)
..+.|++.++.+......+ . ....+..|+|++.+..++++-..++.|+.+++.. ......+. .....
T Consensus 384 ~~~~I~~id~~~~~~~~~~---~-----~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~-~~~~~ 454 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLI---P-----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQA 454 (699)
T ss_dssp CTTC-CEECTTSCCEECCS---C-----CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCC-SCC--
T ss_pred CccceEEEeCCCCcceeee---c-----cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEe-CCCCC
Confidence 3457888888765433221 1 1124667899887655555555678999999875 22222221 12234
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEe-eCCCCCeeEEEeCCCCCCeEEEEeCC-CcEEEEECCCC
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF-VGHTKGVIAMSWCPNDSSYLLTCAKD-NRTICWDTVSG 297 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~-~~h~~~V~~v~~sp~d~~~l~sgs~D-g~I~iwd~~~~ 297 (719)
...|+++..+..++++-...+ .|.++|+... . +..+ .........|++.+.++.++++-... +.|.++++...
T Consensus 455 P~glavD~~~g~LY~tD~~~~---~I~v~d~dg~-~-~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLG---TVSVADTKGV-K-RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 529 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTS---CEEEEBSSSC-C-EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC
T ss_pred cceEEEEeeCCcEEEEeccCC---eEEEEecCCC-c-eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC
Confidence 567888866656666554444 7999998643 2 3333 22234567889998444444443333 78888877533
Q ss_pred eEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 298 EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 298 ~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
.....+.....+...|+|++++..++++-+..++|.++++.+...
T Consensus 530 ~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~ 574 (699)
T 1n7d_A 530 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 574 (699)
T ss_dssp CCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC
T ss_pred CeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCce
Confidence 222222233345778999998767888877788999999976433
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.15 E-value=0.00033 Score=81.41 Aligned_cols=188 Identities=11% Similarity=-0.029 Sum_probs=121.4
Q ss_pred eCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC----ceeEEecCCCCC
Q 046451 143 ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ----KPVISFSESIKR 218 (719)
Q Consensus 143 s~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~----~~~~~~~~~~~~ 218 (719)
+....|+..++........+ . ....+..|+|+..+..++++-...+.|+.+++... .....+. ....
T Consensus 401 an~~~Ir~i~l~~~~~~~l~---~-----~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~-~~l~ 471 (791)
T 3m0c_C 401 TNRHEVRKMTLDRSEYTSLI---P-----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQ 471 (791)
T ss_dssp ECBSSEEEECTTSCCCEEEE---C-----SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC-SSCS
T ss_pred ccccceeEeeccCCcceeee---c-----CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe-cCCC
Confidence 34467888888765432221 1 12367899999866567777777788999998753 2222222 3445
Q ss_pred ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe-CC-CcEEEEECCC
Q 046451 219 RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA-KD-NRTICWDTVS 296 (719)
Q Consensus 219 ~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs-~D-g~I~iwd~~~ 296 (719)
....|+++..+.+++++-...+ .|.+.++... .....+.........|++.+ .+.+|+... .+ +.|.+.++..
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~---~I~v~~ldG~-~~~~l~~~~l~~P~gIaVDp-~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLG---TVSVADTKGV-KRKTLFRENGSKPRAIVVDP-VHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTT---EEEEEETTSS-SEEEEEECTTCCEEEEEEET-TTTEEEEEECSSSCEEEEEETTS
T ss_pred CcceeeeeecCCcEEEEecCCC---eEEEEeCCCC-eEEEEEeCCCCCcceEEEec-CCCCEEEecCCCCCeEEEEecCC
Confidence 6778999988766776666665 8999998643 22222333445688999998 544555444 33 7899999865
Q ss_pred CeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 297 GEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 297 ~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
......+...-.+...|++++.+..++++-...++|..+++.+.....
T Consensus 547 ~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~ 594 (791)
T 3m0c_C 547 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT 594 (791)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEE
Confidence 444444444446789999998775666666667899999997765543
No 288
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.14 E-value=3.8e-05 Score=88.62 Aligned_cols=209 Identities=12% Similarity=-0.003 Sum_probs=126.8
Q ss_pred CCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCC---CCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEE
Q 046451 124 GPVRGLEFNSFTPNLLASGADDGEICIWDLSAP---AEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVV 200 (719)
Q Consensus 124 ~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~---~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~i 200 (719)
..+..|+|++.++.++++-...+.|+.+++... .....+ +.. .......|++...+++++++-...+.|.+
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~--i~~----~~~~P~glavD~~~g~LY~tD~~~~~I~v 479 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--ISR----DIQAPDGLAVDWIHSNIYWTDSVLGTVSV 479 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCB--CCS----CC--CCCEECCCSSSBCEECCTTTSCEEE
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEE--EeC----CCCCcceEEEEeeCCcEEEEeccCCeEEE
Confidence 456789998844444555456689999998752 111111 111 11134567777655566666667789999
Q ss_pred EECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeE
Q 046451 201 WDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYL 280 (719)
Q Consensus 201 wd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l 280 (719)
+++........+. ........|++++.+.+++++-... .+.|.++++..... ...+.........|+|++.+++++
T Consensus 480 ~d~dg~~~~~l~~-~~~~~P~giavDp~~g~ly~td~~~--~~~I~~~~~dG~~~-~~l~~~~l~~PnGlavd~~~~~LY 555 (699)
T 1n7d_A 480 ADTKGVKRKTLFR-EQGSKPRAIVVDPVHGFMYWTDWGT--PAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLY 555 (699)
T ss_dssp EBSSSCCEEEECC-CSSCCCCCEECCSSSSCCEECCCSS--SCCEEBCCSSSCCC-CEESCSSCSSCCCEEECTTTCCEE
T ss_pred EecCCCceEEEEe-CCCCCcceEEEccCCCcEEEcccCC--CCeEEEEeCCCCCe-eEEEeCCCCCccEEEEeccCCEEE
Confidence 9987654433333 2345568899999776666654332 13788888754322 122222234567899998445566
Q ss_pred EEEeCCCcEEEEECCCCeEEEEec--CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 281 LTCAKDNRTICWDTVSGEIVSELP--AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 281 ~sgs~Dg~I~iwd~~~~~~~~~l~--~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
++-+..+.|.++|+........+. ........|++..+ .++++....++|..++..+++.+.
T Consensus 556 ~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 556 WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp EEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTEEEEE
T ss_pred EEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCCCceE
Confidence 666677899999986433222222 12234556777554 477777777899999987776654
No 289
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.13 E-value=0.0038 Score=63.18 Aligned_cols=272 Identities=12% Similarity=0.103 Sum_probs=160.9
Q ss_pred CCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCce
Q 046451 37 SSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLI 116 (719)
Q Consensus 37 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~ 116 (719)
+...+.|.|+.......+.. ..-+ +.-.+|.. .+||.-. ...+.|+|++ +. ..+
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrp----i~Ad----sAIMnP~~--------~ViALra-g~~LQiFnle------tK---~kl 100 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRP----ISAD----SAIMNPAS--------KVIALKA-GKTLQIFNIE------MK---SKM 100 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEE----CCCS----EEEECSSS--------SEEEEEE-TTEEEEEETT------TT---EEE
T ss_pred CCCEEEEEECCCCCCccccc----cccc----eeeeCCCc--------cEEEEec-CCeEEEechH------Hh---hhh
Confidence 34466778877654432211 1111 33346664 5777665 6789999994 33 444
Q ss_pred eeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe---
Q 046451 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS--- 193 (719)
Q Consensus 117 ~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s--- 193 (719)
+.+.- .+.|.-=.|- +.+.|+-.+. ..|+-|++........+ +..+..-....|..-..+++..-++++|-
T Consensus 101 ks~~~-~e~VvfWkWi--s~~~L~lVT~-taVyHWs~~~~s~P~kv--FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~ 174 (365)
T 2xzh_A 101 KAHTM-TDDVTFWKWI--SLNTVALVTD-NAVYHWSMEGESQPVKM--FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 174 (365)
T ss_dssp EEEEC-SSCEEEEEEC--SSSEEEEEES-SEEEEEESSTTCCCEEE--EECCGGGTTCEEEEEEECTTSCEEEEEEEEEE
T ss_pred cceec-CCccEEEEec--CCCeEEEEcC-CcEEEEcccCCCCCcee--eecchhcccceEEEEEECCCCCEEEEEeEecc
Confidence 44443 3566666665 4566666654 57999999875544333 22211112346777777888643333332
Q ss_pred ---CCCcEEEEECCCCceeEEecCCCCCceeEEEECCCC--CcEEEEEeCCCCCCcEEEEecCCC--CC-c--eEE---e
Q 046451 194 ---YNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDV--ATQLVVASDEDSSPALRLWDMRNT--MS-P--VKE---F 260 (719)
Q Consensus 194 ---~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g--~~~l~~~s~d~~~~~I~lwDl~~~--~~-~--~~~---~ 260 (719)
-.|.+.+|..+.+. ...+. +|......+.+..+. ..+|+.+......+.++|.++... .. . .+. +
T Consensus 175 ~~~v~G~mQLYS~er~~-sQ~ie-Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~ 252 (365)
T 2xzh_A 175 QNRVVGAMQLYSVDRKV-SQPIE-GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVF 252 (365)
T ss_dssp TTEEEEEEEEEETTTTE-EEEEC-CSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEEC
T ss_pred CCccceeEEEEeecccc-cceee-eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceee
Confidence 23778899987543 33333 555554444333221 123444443222237999998543 11 1 111 1
Q ss_pred e---CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeC
Q 046451 261 V---GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337 (719)
Q Consensus 261 ~---~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~ 337 (719)
. ...+--.++..+. .-.+++.-+.-|.|++||+.++.++..-+-..+.|+..+-+.+. .=++....+|.|.--.+
T Consensus 253 fppea~~DFPVamqvs~-kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~-~Gi~~Vnr~GqVl~v~v 330 (365)
T 2xzh_A 253 FPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEAT-AGIIGVNRKGQVLSVCV 330 (365)
T ss_dssp CCTTCTTCCEEEEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGG-TEEEEEETTCEEEEEEE
T ss_pred CCccccCCceEEEEecc-cCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCC-CcEEEEcCCCEEEEEEE
Confidence 1 1233445677777 66788889999999999999999999888777778776665554 23444557888888888
Q ss_pred CCCcccc
Q 046451 338 EGCSRYG 344 (719)
Q Consensus 338 ~~~~~~~ 344 (719)
+...++.
T Consensus 331 ~~~~ivp 337 (365)
T 2xzh_A 331 EEENIIP 337 (365)
T ss_dssp CTTTHHH
T ss_pred CcccEeh
Confidence 8777654
No 290
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.13 E-value=0.0093 Score=67.51 Aligned_cols=289 Identities=11% Similarity=-0.010 Sum_probs=153.9
Q ss_pred ccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEE
Q 046451 9 RSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVA 88 (719)
Q Consensus 9 ~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~la 88 (719)
....+++...++.|..+. ...+.|.+.+++.... .. +. ...-.....|++.+.+ +.|+
T Consensus 85 ~P~GlAvD~~~~~ly~~d---------~~~~~I~v~~~dG~~~--~~-l~--~~~l~~P~~Iavdp~~--------g~ly 142 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTD---------SETNRIEVSNLDGSLR--KV-LF--WQELDQPRAIALDPSS--------GFMY 142 (619)
T ss_dssp CEEEEEEETTTTEEEEEE---------TTTTEEEEEETTSCSC--EE-EE--CSSCSCCCCEEEETTT--------TEEE
T ss_pred CcCeEEEEecCCEEEEEe---------CCCCEEEEEECCCCCE--EE-EE--eCCCCCCceEEEecCC--------CeEE
Confidence 344566666444443332 2344556776663221 11 11 1233456788998865 3444
Q ss_pred EEcC--CCcEEEEcCCccccCCCCCCCCceee-eccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCc
Q 046451 89 GGLV--DGSIDIWNPLSLISSGETGGNPLIAH-LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPL 165 (719)
Q Consensus 89 sgs~--dg~I~lwd~~~~~~~~~~~~~~~~~~-l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l 165 (719)
.... .+.|...+++ + ..... ....-.....|++++.+++++++-...+.|..+|+........ .
T Consensus 143 ~tD~g~~~~I~r~~~d-------G---~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~---~ 209 (619)
T 3s94_A 143 WTDWGEVPKIERAGMD-------G---SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV---V 209 (619)
T ss_dssp EEECSSSCEEEEEETT-------S---CSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------
T ss_pred EeccCCCCEEEEEECC-------C---CceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEE---E
Confidence 4432 3566666652 2 22222 2223446789999985555555556678899999875433221 1
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCC----------C--------------CCcee
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSES----------I--------------KRRCS 221 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~----------~--------------~~~i~ 221 (719)
... ......|++..+ +++++-..++.|...|..+++....+... | .+.+.
T Consensus 210 ~~~----~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs 283 (619)
T 3s94_A 210 KGS----LPHPFALTLFED--ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCS 283 (619)
T ss_dssp ----------CCCEEESSS--EEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCS
T ss_pred eCC----CCCceEEEEeCC--EEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCccc
Confidence 111 112346666654 46666666788999998776543332210 0 01111
Q ss_pred EEEE-----------CC-------CC-------CcEEEEEeCCCCCCcEEEEecCCCCCceEEee-CCCCCeeEEEeCCC
Q 046451 222 VLQW-----------NP-------DV-------ATQLVVASDEDSSPALRLWDMRNTMSPVKEFV-GHTKGVIAMSWCPN 275 (719)
Q Consensus 222 ~l~~-----------sp-------~g-------~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~-~h~~~V~~v~~sp~ 275 (719)
.+++ .+ |+ +.+|+.+... .|+..++.........+. .....+..|+|.+.
T Consensus 284 ~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~----~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~ 359 (619)
T 3s94_A 284 HLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRT----DLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPV 359 (619)
T ss_dssp SEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESS----CEEEEESSSTTCCCEECCCSCCSSEEEEEEETT
T ss_pred ceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEccc----ceEEEecCCCccceeEEeccccCccEEEEEEcC
Confidence 1221 11 11 1123333332 466667654322111111 12345778999884
Q ss_pred CCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 276 DSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 276 d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
++.++++-...+.|+.+++........+........++++...+.+++++-+..+.|.+.++.+...
T Consensus 360 ~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~ 426 (619)
T 3s94_A 360 EGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMR 426 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeE
Confidence 4455555556788999998654333333333455778999875546778877789999999987644
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.12 E-value=0.00041 Score=75.62 Aligned_cols=248 Identities=9% Similarity=0.004 Sum_probs=142.9
Q ss_pred ceeeeecCC-CCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc----ccCCEEEEEE-------eCC
Q 046451 67 FNRLAWGKN-GSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR----HKGPVRGLEF-------NSF 134 (719)
Q Consensus 67 V~~l~~sp~-g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~----h~~~V~~l~f-------sp~ 134 (719)
...|+|.|. .. +++++-...+.|++.|++. ..+..+.. .......|+| +.
T Consensus 141 p~~la~dp~~~~-------~Lyv~~~~~~~i~~ID~~~----------~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~- 202 (496)
T 3kya_A 141 NGRLAFDPLNKD-------HLYICYDGHKAIQLIDLKN----------RMLSSPLNINTIPTNRIRSIAFNKKIEGYAD- 202 (496)
T ss_dssp EEEEEEETTEEE-------EEEEEEETEEEEEEEETTT----------TEEEEEECCTTSSCSBEEEEEECCCBTTTBC-
T ss_pred CCEEEEccCCCC-------EEEEEECCCCeEEEEECCC----------CEEEEEEccCccccCCCcEEEEeecccccCC-
Confidence 346788873 31 3444444446788888732 23333322 1235789999 88
Q ss_pred CCCEEEEEeCCC-------cEEEEcCCCCCCCCc-c--CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC
Q 046451 135 TPNLLASGADDG-------EICIWDLSAPAEPSH-F--PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK 204 (719)
Q Consensus 135 ~~~~lasgs~dg-------~I~iwdl~~~~~~~~-~--~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~ 204 (719)
++++|+++...+ .|.+++......... . ..+.. -.....++++++++.++++-..++.|+.+|+.
T Consensus 203 ~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-----~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 203 EAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-----YKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp TTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-----ESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc-----CCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 677565555543 266666433112110 0 00110 11345778899766778788888999999987
Q ss_pred -------CCce-----------eEE-ecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCce---EEeeC
Q 046451 205 -------KQKP-----------VIS-FSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPV---KEFVG 262 (719)
Q Consensus 205 -------~~~~-----------~~~-~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~---~~~~~ 262 (719)
++.. ... +..........|+|+++|..++++-.... .|+.+|.......+ ..+.+
T Consensus 278 ~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h---~I~kid~dg~~~~~~~~~~~aG 354 (496)
T 3kya_A 278 DYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNH---YFMRSDYDEIKKEFITPYNFVG 354 (496)
T ss_dssp HHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT---EEEEEEEETTTTEECCCEEEEE
T ss_pred cccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCC---EEEEEecCCCcceecccEEecC
Confidence 4543 111 22123455689999999964555554444 89887764322111 22222
Q ss_pred C---C------------CCee-EEEeC-------CCCCCeEEEEeCCCcEEEEECCCCeEEEEecCC-------------
Q 046451 263 H---T------------KGVI-AMSWC-------PNDSSYLLTCAKDNRTICWDTVSGEIVSELPAG------------- 306 (719)
Q Consensus 263 h---~------------~~V~-~v~~s-------p~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h------------- 306 (719)
. . ..-. .++.. . ++.++++-..+++|+.++. +|.. .++-+.
T Consensus 355 ~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~-~g~lyVaD~~N~rIr~i~~-~G~v-~TiaG~g~~~~~~~~~~~G 431 (496)
T 3kya_A 355 GYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEE-EYDFYFVDRLNFCVRKVTP-EGIV-STYAGRGASTSLADGNQWG 431 (496)
T ss_dssp BTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSC-CEEEEEEEGGGTEEEEECT-TCBE-EEEEESCTTHHHHHSCSCC
T ss_pred CCCCCcccCCcccccccCCCeEEEEEccccccccC-CCeEEEEECCCCEEEEEeC-CCCE-EEEecccccccccCccccc
Confidence 1 0 1223 34443 3 5666776677889999984 6643 333211
Q ss_pred -----------CCCeEEeEEcCC-CCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 307 -----------TNWNFDIHWYPK-IPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 307 -----------~~~v~~l~~spd-g~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
-.....|+++++ + .++++=..+++|+.++++......
T Consensus 432 ~~dG~~~~~a~f~~P~gIavd~~~g-~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 432 TDDGDLREVARFRDVSGLVYDDVKE-MFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp CCCEETTTTCCCSSEEEEEEETTTT-EEEEEETTTTEEEEEEECCCC---
T ss_pred cCCCCchhhhhcCCCcEEEEECCCC-EEEEEeCCCCEEEEEECCCCcccc
Confidence 124678999997 6 677777778899999998876654
No 292
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.06 E-value=0.015 Score=65.88 Aligned_cols=188 Identities=10% Similarity=-0.016 Sum_probs=117.7
Q ss_pred CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEE
Q 046451 144 DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVL 223 (719)
Q Consensus 144 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l 223 (719)
..+.|+..++...........+. .-..+..|+|++.++.++++-...+.|+.+++........+. ..-.....+
T Consensus 324 ~~~~i~~i~l~~~~~~~~~~~~~-----~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~-~~~~~p~Gl 397 (619)
T 3s94_A 324 RRTDLRRISLDTPDFTDIVLQLE-----DIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVT-AQIAHPDGI 397 (619)
T ss_dssp ESSCEEEEESSSTTCCCEECCCS-----CCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SSCSCCCEE
T ss_pred cccceEEEecCCCccceeEEecc-----ccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEE-CCCCCcCce
Confidence 34567777776554322110111 123578899998665666666668899999988654333333 334567789
Q ss_pred EECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEe-eCCCCCeeEEEeCCCCCCeEEEEe-CCCcEEEEECCCCeEEE
Q 046451 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF-VGHTKGVIAMSWCPNDSSYLLTCA-KDNRTICWDTVSGEIVS 301 (719)
Q Consensus 224 ~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~-~~h~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~~~~~~~ 301 (719)
+++..+.+++++-...+ .|.+.++.... ...+ ........+|++.|..+.++++-. ....|...++.......
T Consensus 398 AvD~~~~~lY~tD~~~~---~I~v~~~~G~~--~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~ 472 (619)
T 3s94_A 398 AVDWVARNLYWTDTGTD---RIEVTRLNGTM--RKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVV 472 (619)
T ss_dssp EEETTTTEEEEEETTTT---EEEEEETTSCS--CEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred EEecccCcEEEEeCCCC---cEEEEeCCCCe--EEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEE
Confidence 99876656666655555 89999987542 2333 233456789999983344444432 23677777774332222
Q ss_pred EecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 302 ~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
.....-.+...|++++++..+.++-+..++|..+++.+...
T Consensus 473 l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~ 513 (619)
T 3s94_A 473 LVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGR 513 (619)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC
T ss_pred EEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCce
Confidence 23334567899999987756666666678899999876544
No 293
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.05 E-value=0.0056 Score=64.35 Aligned_cols=272 Identities=12% Similarity=0.100 Sum_probs=165.4
Q ss_pred CCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCce
Q 046451 37 SSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLI 116 (719)
Q Consensus 37 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~ 116 (719)
+...+.|.|+.......+... .- .+.-.+|.. .+||.-. ...+.|+|++ +. ..+
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi----~A----dsAIMnP~~--------~iiALra-g~~lQiFnle------~K---~kl 99 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPI----SA----DSAIMNPAS--------KVIALKA-GKTLQIFNIE------MK---SKM 99 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEEC----CC----SEEEECSSS--------SCEEEEE-TTEEEEEETT------TT---EEE
T ss_pred CCCeEEEEECCCCCcceeccc----cc----ceeeeCCCC--------cEEEEec-CCeEEEEchH------Hh---hhh
Confidence 445677888876544322111 11 133456654 5777665 7889999993 33 444
Q ss_pred eeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe---
Q 046451 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS--- 193 (719)
Q Consensus 117 ~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s--- 193 (719)
+.+.- ...|.-=.|-. .+.|+-.+. ..|+-|++........+ +..+..-....|..-..+++..-++++|-
T Consensus 100 ks~~~-~e~VvfWkWis--~~~l~lVT~-taVyHWsi~~~s~P~kv--FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~ 173 (494)
T 1bpo_A 100 KAHTM-TDDVTFWKWIS--LNTVALVTD-NAVYHWSMEGESQPVKM--FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 173 (494)
T ss_dssp EEEEC-SSCCCEEEEEE--TTEEEEECS-SEEEEEESSSSCCCEEE--EECCGGGTTCEEEEEEECTTSSEEEEEEEEEE
T ss_pred cceec-CCCceEEEecC--CCeEEEEcC-CeeEEecccCCCCchhh--eecchhcccceEEEEEECCCCCeEEEEeeccc
Confidence 44443 34566666654 466666554 57999999865444333 22211112356777777888643333332
Q ss_pred ---CCCcEEEEECCCCceeEEecCCCCCceeEEEECCCC--CcEEEEEeCCCCCCcEEEEecCCC--CC-c--eEEee--
Q 046451 194 ---YNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDV--ATQLVVASDEDSSPALRLWDMRNT--MS-P--VKEFV-- 261 (719)
Q Consensus 194 ---~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g--~~~l~~~s~d~~~~~I~lwDl~~~--~~-~--~~~~~-- 261 (719)
-.|.+.+|..+.+. ...+. +|......+.+..+. ..+++.+......+.++|.++... .. . .+...
T Consensus 174 ~~~v~G~mQLYS~er~~-sQ~ie-Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~ 251 (494)
T 1bpo_A 174 QNRVVGAMQLYSVDRKV-SQPIE-GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVF 251 (494)
T ss_dssp TTEEEEEEEEEESTTCC-EEEEC-CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECC
T ss_pred CCcccceEEEeeccccc-cchhe-eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeee
Confidence 24778899987543 33333 566655555544322 234555555433358999998543 11 1 11111
Q ss_pred ----CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeC
Q 046451 262 ----GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337 (719)
Q Consensus 262 ----~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~ 337 (719)
.-.+--.++..++ .-.+++.-+.-|.|++||+.++.++..-+-..+.|+..+-+.+. .=++....+|.|.--.+
T Consensus 252 fppe~~~DFPvamqvs~-kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~-~Gi~~Vnr~GqVl~v~v 329 (494)
T 1bpo_A 252 FPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEAT-AGIIGVNRKGQVLSVCV 329 (494)
T ss_dssp CCTTSTTCCEEEEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTT-TEEEEEETTCEEEEEEE
T ss_pred CCcccccCceeEEEecc-cCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCC-CcEEEEccCceEEEEEE
Confidence 1233445777887 67788889999999999999999999888777778777776665 34444557888888888
Q ss_pred CCCcccc
Q 046451 338 EGCSRYG 344 (719)
Q Consensus 338 ~~~~~~~ 344 (719)
+...++.
T Consensus 330 ~e~~ivp 336 (494)
T 1bpo_A 330 EEENIIP 336 (494)
T ss_dssp CTTTHHH
T ss_pred ccccchh
Confidence 8877655
No 294
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.96 E-value=0.0027 Score=72.09 Aligned_cols=228 Identities=7% Similarity=-0.028 Sum_probs=139.7
Q ss_pred ceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceee
Q 046451 39 ANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH 118 (719)
Q Consensus 39 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~ 118 (719)
..|+..+++.......+. ...-..+..|+|++.+. .++++-..++.|..++++. . .....
T Consensus 15 ~~I~~i~l~~~~~~~~~~----~~~~~~~~~l~~d~~~~-------~lywtD~~~~~I~r~~~~g------~---~~~~v 74 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIP----LTGVKEASALDFDVTDN-------RIYWTDISLKTISRAFMNG------S---ALEHV 74 (628)
T ss_dssp TEEEEEESSCTTCEEECC----CCSCSCEEEEEEETTTT-------EEEEEETTTTEEEEEETTS------C---SCEEE
T ss_pred CcEEEEECCCCCcceEEE----cCCCCceEEEEEECCCC-------EEEEEECCCCeEEEEECCC------C---CcEEE
Confidence 445667776433221111 12234677999998652 5566666788999988732 1 11222
Q ss_pred eccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEE-eCCCc
Q 046451 119 LSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILAST-SYNGT 197 (719)
Q Consensus 119 l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~-s~dg~ 197 (719)
+.........|++...+++++++-...+.|.+.++..... ..+ +.. .-.....|++++..+.++++- +..+.
T Consensus 75 ~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l--~~~----~l~~P~~iavdp~~G~lY~tD~g~~~~ 147 (628)
T 4a0p_A 75 VEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-QVL--VWK----DLDSPRALALDPAEGFMYWTEWGGKPK 147 (628)
T ss_dssp ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-EEE--ECS----SCCCEEEEEEETTTTEEEEEECSSSCE
T ss_pred EeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-EEE--EeC----CCCCcccEEEccCCCeEEEeCCCCCCE
Confidence 2222245678888875566667767778999999875432 221 111 123578999998655455543 23578
Q ss_pred EEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCC
Q 046451 198 TVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDS 277 (719)
Q Consensus 198 I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~ 277 (719)
|...++........+. .-.....|++++++..++++-...+ .|..+|+..... ..+.........|++.. +
T Consensus 148 I~r~~~dG~~~~~l~~--~~~~P~GlalD~~~~~LY~aD~~~~---~I~~~d~dG~~~--~v~~~~l~~P~glav~~--~ 218 (628)
T 4a0p_A 148 IDRAAMDGSERTTLVP--NVGRANGLTIDYAKRRLYWTDLDTN---LIESSNMLGLNR--EVIADDLPHPFGLTQYQ--D 218 (628)
T ss_dssp EEEEETTSCSCEEEEC--SCSSEEEEEEETTTTEEEEEETTTT---EEEEEETTSCSC--EEEEECCSCEEEEEEET--T
T ss_pred EEEEeCCCCceEEEEC--CCCCcceEEEccccCEEEEEECCCC---EEEEEcCCCCce--EEeeccCCCceEEEEEC--C
Confidence 8888887554333333 4567889999998766666655555 899999865433 33444445566788753 3
Q ss_pred CeEEEEeCCCcEEEEECCCCeEEEE
Q 046451 278 SYLLTCAKDNRTICWDTVSGEIVSE 302 (719)
Q Consensus 278 ~~l~sgs~Dg~I~iwd~~~~~~~~~ 302 (719)
.++++-...+.|...|..+|+....
T Consensus 219 ~ly~tD~~~~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 219 YIYWTDWSRRSIERANKTSGQNRTI 243 (628)
T ss_dssp EEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EEEEecCCCCEEEEEECCCCCceEE
Confidence 4555555678899999777654333
No 295
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.92 E-value=0.001 Score=72.55 Aligned_cols=245 Identities=11% Similarity=0.095 Sum_probs=140.1
Q ss_pred CEEEEEEeCC-CCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEe-------cCCCCcEEEEEeCCC
Q 046451 125 PVRGLEFNSF-TPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSW-------NSKVQHILASTSYNG 196 (719)
Q Consensus 125 ~V~~l~fsp~-~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~-------sp~g~~~l~s~s~dg 196 (719)
....|+|+|. +++++++....+.|++.|+.+....... .. ..........|+| +.++..++++...++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~---~~-~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~ 215 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPL---NI-NTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG 215 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEE---CC-TTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEE---cc-CccccCCCcEEEEeecccccCCCCCEEEEEeCCCC
Confidence 4568999973 3455555555577888998875543221 11 1112336889999 999854554444432
Q ss_pred c------EEEEECCC-Ccee-----EEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecC-------CCCC--
Q 046451 197 T------TVVWDLKK-QKPV-----ISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMR-------NTMS-- 255 (719)
Q Consensus 197 ~------I~iwd~~~-~~~~-----~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~-------~~~~-- 255 (719)
. |.+++... +... ..+. .......+++++++..++++...++ .|..+|+. ++..
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~--~~~~p~giavdp~~g~LYvtd~~~g---~V~r~d~~~~~~~~~tg~~~t 290 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIA--AYKQCNGATIHPINGELYFNSYEKG---QVFRLDLVDYFKTIKNGGSWD 290 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEE--EESCCCCEEECTTTCCEEEEETTTT---EEEEECHHHHHHHHHTTCCCC
T ss_pred CcccCceEEEEecCCCCceeecccceeec--cCCCceEEEEcCCCCeEEEEECCCC---EEEEEecccccccccCceeec
Confidence 2 66776443 2221 2222 2235567899997667777776666 89999987 3322
Q ss_pred ---c-----eEE-ee-CCCCCeeEEEeCCCCCCeE-EEEeCCCcEEEEEC--CCCeEE--EEecC------C--------
Q 046451 256 ---P-----VKE-FV-GHTKGVIAMSWCPNDSSYL-LTCAKDNRTICWDT--VSGEIV--SELPA------G-------- 306 (719)
Q Consensus 256 ---~-----~~~-~~-~h~~~V~~v~~sp~d~~~l-~sgs~Dg~I~iwd~--~~~~~~--~~l~~------h-------- 306 (719)
+ ... +. .....-+.|+|++ ++++| ++-...++|+.+|. ..+... ..+-+ .
T Consensus 291 p~~~~~~g~~~~l~~~~~~~~p~~ia~~p-~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a 369 (496)
T 3kya_A 291 PIVKNNPNTFKQLFTIADPSWEFQIFIHP-TGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEA 369 (496)
T ss_dssp CBGGGCTTTEEEEEECSSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGC
T ss_pred ccccccccccceeEecCCCCCceEEEEcC-CCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCccccc
Confidence 0 112 11 2234567899999 88854 44456778888654 333320 11111 1
Q ss_pred -CCCeE-EeEEc-------CCCCCEEEEEeCCCcEEEEeCCCCcccc-cCCC-----------CCCCCCccCcceecCCC
Q 046451 307 -TNWNF-DIHWY-------PKIPGVISASSFDGKIGIYNIEGCSRYG-VGDS-----------NFSAAPLRAPKWYKRPA 365 (719)
Q Consensus 307 -~~~v~-~l~~s-------pdg~~~las~s~Dg~I~iwd~~~~~~~~-~~~~-----------~~~~~~~~~p~w~~~~~ 365 (719)
-.... .+... .++ .++++-..+++|+.++. ++.... .+.. .+..+.......+..|.
T Consensus 370 ~f~~P~~gv~vd~~~~~~~~~g-~lyVaD~~N~rIr~i~~-~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~ 447 (496)
T 3kya_A 370 RMNNPCQGVFVKNPDYTGEEEY-DFYFVDRLNFCVRKVTP-EGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVS 447 (496)
T ss_dssp BCSSEEEEEEEECTTCCSSCCE-EEEEEEGGGTEEEEECT-TCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEE
T ss_pred ccCCCeEEEEEccccccccCCC-eEEEEECCCCEEEEEeC-CCCEEEEecccccccccCccccccCCCCchhhhhcCCCc
Confidence 12244 44554 445 67777777889999994 444332 1110 11122123344677788
Q ss_pred ceeeeeC-CcEEEEccC
Q 046451 366 GASFGFG-GKLVSFHPK 381 (719)
Q Consensus 366 ~~s~s~~-Gklv~~~~~ 381 (719)
++++..+ |.|++.+..
T Consensus 448 gIavd~~~g~lyVaD~~ 464 (496)
T 3kya_A 448 GLVYDDVKEMFYVHDQV 464 (496)
T ss_dssp EEEEETTTTEEEEEETT
T ss_pred EEEEECCCCEEEEEeCC
Confidence 9999986 887776644
No 296
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.92 E-value=0.00059 Score=73.88 Aligned_cols=239 Identities=8% Similarity=0.031 Sum_probs=133.9
Q ss_pred CEEEEEEeCC-CCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC---C-cEE
Q 046451 125 PVRGLEFNSF-TPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN---G-TTV 199 (719)
Q Consensus 125 ~V~~l~fsp~-~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d---g-~I~ 199 (719)
....|+|+++ +...|+.+...+.|+.+|..++...... . .......++|+++|. ++++...+ . .+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~----~----~~~~P~giavd~dG~-lyVad~~~~~~~~gv~ 210 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT----T----NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIY 210 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC----C----CCSCEEEEEECTTCC-EEEEECCSCTTSEEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee----c----CCCCccEEEECCCCC-EEEEcCCCCcccceEE
Confidence 4568999873 2345555555589999998765533221 1 223688999999985 55554322 1 133
Q ss_pred EEECCCCce-eEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEe-e-CCCCCeeEEEeCCCC
Q 046451 200 VWDLKKQKP-VISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEF-V-GHTKGVIAMSWCPND 276 (719)
Q Consensus 200 iwd~~~~~~-~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~-~-~h~~~V~~v~~sp~d 276 (719)
.++...+.. ...+. .......++++++...++++...++ .|+.+|..++ .....+ . +....-..|+|++ +
T Consensus 211 ~~~~~~~~~~~~~~~--~~~~P~giavd~~~G~lyv~d~~~~---~V~~~d~~~g-~~~~~~~~~~~~~~~~~ia~dp-d 283 (433)
T 4hw6_A 211 LFTRASGFTERLSLC--NARGAKTCAVHPQNGKIYYTRYHHA---MISSYDPATG-TLTEEEVMMDTKGSNFHIVWHP-T 283 (433)
T ss_dssp EECGGGTTCCEEEEE--ECSSBCCCEECTTTCCEEECBTTCS---EEEEECTTTC-CEEEEEEECSCCSSCEEEEECT-T
T ss_pred EEECCCCeecccccc--ccCCCCEEEEeCCCCeEEEEECCCC---EEEEEECCCC-eEEEEEeccCCCCCcccEEEeC-C
Confidence 333222211 01121 2344567889994335555555554 7999998644 221222 1 1222335699999 7
Q ss_pred CCeE-EEEeCCCcEEEEECC--CCeE--EEEecC---------------CCCCeEEeEE---------cCCCCCEEEEEe
Q 046451 277 SSYL-LTCAKDNRTICWDTV--SGEI--VSELPA---------------GTNWNFDIHW---------YPKIPGVISASS 327 (719)
Q Consensus 277 ~~~l-~sgs~Dg~I~iwd~~--~~~~--~~~l~~---------------h~~~v~~l~~---------spdg~~~las~s 327 (719)
+++| ++-...++|+.+|+. +++. ...+-+ .-.....+++ ..++ .++++-.
T Consensus 284 G~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g-~lyvaD~ 362 (433)
T 4hw6_A 284 GDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEY-DFYFCDR 362 (433)
T ss_dssp SSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCE-EEEEEET
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCC-cEEEEEC
Confidence 7744 455567889998865 3321 111111 1234677999 6666 6777777
Q ss_pred CCCcEEEEeCCCCcccc-cCCC-----CCCCCCccCcceecCCCceeee-eCCcEEEEccC
Q 046451 328 FDGKIGIYNIEGCSRYG-VGDS-----NFSAAPLRAPKWYKRPAGASFG-FGGKLVSFHPK 381 (719)
Q Consensus 328 ~Dg~I~iwd~~~~~~~~-~~~~-----~~~~~~~~~p~w~~~~~~~s~s-~~Gklv~~~~~ 381 (719)
..++|+.++. ++.... .+.. .+.........-+..|.+++++ .+|.|++.+..
T Consensus 363 ~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~ 422 (433)
T 4hw6_A 363 DSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCD 422 (433)
T ss_dssp TTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGG
T ss_pred CCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCC
Confidence 7889999986 344332 1111 1111101122245567889999 78887766543
No 297
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.88 E-value=0.0049 Score=69.92 Aligned_cols=232 Identities=8% Similarity=-0.070 Sum_probs=145.3
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec-cccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS-RHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP 164 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~ 164 (719)
+|+.+ ....|+..+++. . .....+. ..-..+..|+|++.++.++++-..++.|+.+++........
T Consensus 8 ~Ll~s-~~~~I~~i~l~~------~---~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v--- 74 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLET------N---NNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHV--- 74 (628)
T ss_dssp EEEEE-ETTEEEEEESSC------T---TCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE---
T ss_pred EEEEE-eCCcEEEEECCC------C---CcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEE---
Confidence 44444 467899999842 1 1111111 12346789999985566666666789999999875432221
Q ss_pred ccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCc
Q 046451 165 LRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPA 244 (719)
Q Consensus 165 l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~ 244 (719)
+.. .......|+++..+++++++-...+.|.+.++........+. ..-.....|+++|....++++-..+ .+.
T Consensus 75 ~~~----g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~-~~l~~P~~iavdp~~G~lY~tD~g~--~~~ 147 (628)
T 4a0p_A 75 VEF----GLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW-KDLDSPRALALDPAEGFMYWTEWGG--KPK 147 (628)
T ss_dssp ECS----SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC-SSCCCEEEEEEETTTTEEEEEECSS--SCE
T ss_pred EeC----CCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe-CCCCCcccEEEccCCCeEEEeCCCC--CCE
Confidence 111 112456788876666677777778899999997654333232 3445678999998655555554321 237
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEE
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~la 324 (719)
|...++.... ...+.........|++++.+++++++-...+.|..+|+..... ..+........+|++.. + .+++
T Consensus 148 I~r~~~dG~~--~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~-~ly~ 222 (628)
T 4a0p_A 148 IDRAAMDGSE--RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-D-YIYW 222 (628)
T ss_dssp EEEEETTSCS--CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-T-EEEE
T ss_pred EEEEeCCCCc--eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-C-EEEE
Confidence 8888886432 3333334567789999983344444445678899999865433 33333444577888875 3 5777
Q ss_pred EEeCCCcEEEEeCCCCcc
Q 046451 325 ASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 325 s~s~Dg~I~iwd~~~~~~ 342 (719)
+-...+.|...|..+++.
T Consensus 223 tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 223 TDWSRRSIERANKTSGQN 240 (628)
T ss_dssp EETTTTEEEEEETTTCCS
T ss_pred ecCCCCEEEEEECCCCCc
Confidence 776688999999766654
No 298
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.81 E-value=0.0086 Score=61.72 Aligned_cols=201 Identities=11% Similarity=0.180 Sum_probs=120.7
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC---CCC---EEEEEeC---CCcEEEEcCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF---TPN---LLASGAD---DGEICIWDLSA 155 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~---~~~---~lasgs~---dg~I~iwdl~~ 155 (719)
.+++.....+-+.+||+. + +.+..+.. +.++.+..-+. +++ ++++... +++|.+|++..
T Consensus 41 s~ii~t~k~~gL~Vydl~-------G---~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp 108 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSLD-------G---KMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDG 108 (355)
T ss_dssp CEEEEEETTTEEEEEETT-------S---CEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECT
T ss_pred cEEEEEcCCCCEEEEcCC-------C---cEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECC
Confidence 566666778899999983 3 66666643 55666665540 122 2333333 57899997742
Q ss_pred CC-CCCccCCccCCCCCCCCCeEEEEe--cCCCC-cEEEEEeCCCcEEEEECC-------CCceeEEecCCCCCceeEEE
Q 046451 156 PA-EPSHFPPLRGNGSAAQGEISFVSW--NSKVQ-HILASTSYNGTTVVWDLK-------KQKPVISFSESIKRRCSVLQ 224 (719)
Q Consensus 156 ~~-~~~~~~~l~~~~~~h~~~I~~l~~--sp~g~-~~l~s~s~dg~I~iwd~~-------~~~~~~~~~~~~~~~i~~l~ 224 (719)
.. .+..+.............+..+|+ ++.+. .++++...+|.+..|++. +.+.+++|. ....+..+.
T Consensus 109 ~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~--lgsq~Egcv 186 (355)
T 3amr_A 109 KNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK--MNSQTEGMA 186 (355)
T ss_dssp TTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE--CSSCEEEEE
T ss_pred CCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec--CCCCcceEE
Confidence 21 222221000000001135666777 66433 467788889999999983 335677777 556788888
Q ss_pred ECCCCCcEEEEEeCCCCCCcEEEEecCCCC----CceEEee-CCC-CCeeEEEe--CCCCCC-eEEEEe-CCCcEEEEEC
Q 046451 225 WNPDVATQLVVASDEDSSPALRLWDMRNTM----SPVKEFV-GHT-KGVIAMSW--CPNDSS-YLLTCA-KDNRTICWDT 294 (719)
Q Consensus 225 ~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~----~~~~~~~-~h~-~~V~~v~~--sp~d~~-~l~sgs-~Dg~I~iwd~ 294 (719)
..+.. ..|+++-.+. -|..||.+-.. ..+..+. ++- ..+..|++ .+ +++ +|++++ .++++.+||.
T Consensus 187 vDd~~-g~Lyv~eEd~---GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~-~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 187 ADDEY-GRLYIAEEDE---AIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAA-DGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp EETTT-TEEEEEETTT---EEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECG-GGCEEEEEEEGGGTEEEEEES
T ss_pred EcCCC-CeEEEecccc---eEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecC-CCCEEEEEEcCCCCEEEEEEC
Confidence 98876 4677777775 47777754221 2233321 222 36777877 44 444 555555 6789999999
Q ss_pred C-CCeEEEEec
Q 046451 295 V-SGEIVSELP 304 (719)
Q Consensus 295 ~-~~~~~~~l~ 304 (719)
. +.+.+..|.
T Consensus 262 ~~~~~~vg~f~ 272 (355)
T 3amr_A 262 QGKNKYVADFR 272 (355)
T ss_dssp STTCCEEEEEE
T ss_pred CCCCcEEEEEE
Confidence 7 677777774
No 299
>1dvk_A PRP18; PRE-mRNA splicing factor, X-RAY crystallography, RNA binding protein; 2.15A {Saccharomyces cerevisiae} SCOP: a.72.1.1
Probab=97.80 E-value=4.5e-05 Score=68.50 Aligned_cols=97 Identities=13% Similarity=0.230 Sum_probs=73.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCccchhhhhhHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHhc-CChhHHHhheeeee
Q 046451 614 VINTLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDN-NDFGTALQIQVLLT 692 (719)
Q Consensus 614 ~~~~l~~~~~~~~~~~~~~~~~~~~k~~~~d~~krl~~l~~~l~~~~ls~~~~~~l~~l~~~~~~-~~~~~a~~i~~~l~ 692 (719)
+...|+.+|.+-.+.+.. .....+.++.+.|.-||.+|++++|.+++++.|.+++.+++. ++|..|++..+.|+
T Consensus 35 ~~~y~~~lL~eWe~~L~~-----~~~~~~~Qtk~~l~PL~~~Lr~~~L~~dil~~L~~Iv~~~q~~r~y~~And~Yl~La 109 (173)
T 1dvk_A 35 CNLYIHEILSRWKASLEA-----YHPELFLDTKKALFPLLLQLRRNQLAPDLLISLATVLYHLQQPKEINLAVQSYMKLS 109 (173)
T ss_dssp HHHHHHHHHHHHHHTGGG-----SCHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHTSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Confidence 445566666665544422 123568889999999999999999999999999999999998 99999998654332
Q ss_pred c--------------------------C---C---cccchhHHHHHHHHHhcccc
Q 046451 693 T--------------------------S---D---WDECNFWLATLKRMIKTRQN 715 (719)
Q Consensus 693 ~--------------------------~---~---~~e~~~w~~g~k~li~~~~~ 715 (719)
- + | =+...-|+.+|||||+.++.
T Consensus 110 IGNA~WPIGVTmVGIHeRsareKI~~~~~vAHImnDE~tRKyiqsiKRLmTf~Q~ 164 (173)
T 1dvk_A 110 IGNVAWPIGVTSVGIHARSAHSKIQGGRNAANIMIDERTRLWITSIKRLITFEEW 164 (173)
T ss_dssp HTBCCCCSCC--------------------CBCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCceeeeeeeehhhHHHHHhccchhhHHhccHHHHHHHHHHHHHHHHHHH
Confidence 1 1 2 12345699999999998874
No 300
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.78 E-value=0.00059 Score=73.82 Aligned_cols=161 Identities=10% Similarity=0.153 Sum_probs=102.8
Q ss_pred CeEEEEecC-CCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCC-cEEEEecCC
Q 046451 175 EISFVSWNS-KVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSP-ALRLWDMRN 252 (719)
Q Consensus 175 ~I~~l~~sp-~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~-~I~lwDl~~ 252 (719)
....|+|++ ++. .|+++...+.|+.+|+..++...... .......|+|+++|..++++...++... .+.+++...
T Consensus 138 ~P~~lavdp~~~g-~Lyv~d~~~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHN-HLYLVGEQHPTRLIDFEKEYVSTVYS--GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp CCCEEEEETTEEE-EEEEEEBTEEEEEEETTTTEEEEEEC--CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCCEEEECCCCCC-eEEEEeCCCcEEEEECCCCEEEEEec--CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 456889997 343 45555555889999998766444333 5567889999999965555554332111 244444332
Q ss_pred CCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec-CCCCCeEEeEEcCCCCCEEEEEeCCCc
Q 046451 253 TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP-AGTNWNFDIHWYPKIPGVISASSFDGK 331 (719)
Q Consensus 253 ~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~-~h~~~v~~l~~spdg~~~las~s~Dg~ 331 (719)
.......+. .......+++++.++.++++-..+++|..||...++....+. ....+...|+|++++..++++-...++
T Consensus 215 ~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 215 GFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp TSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred ceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 222112332 234557788998556666666678899999998776522222 223457899999999446777777889
Q ss_pred EEEEeCCC
Q 046451 332 IGIYNIEG 339 (719)
Q Consensus 332 I~iwd~~~ 339 (719)
|..++.+.
T Consensus 294 I~~~~~d~ 301 (430)
T 3tc9_A 294 ILRSDYDW 301 (430)
T ss_dssp EEEEEEET
T ss_pred EEEEeCCc
Confidence 99988764
No 301
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.73 E-value=0.058 Score=55.61 Aligned_cols=241 Identities=11% Similarity=0.033 Sum_probs=126.5
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceee-eccccCCEEEEEEeCCCCCEEEEE
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH-LSRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~-l~~h~~~V~~l~fsp~~~~~lasg 142 (719)
...+.+|.|..++ ..+++| .+|.|... . ..+..++.+.. .......+.+|.|++ +..++ +
T Consensus 35 ~~~~~~v~~~~~~--------~~~~~G-~~g~i~~s-~------DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~-~ 95 (327)
T 2xbg_A 35 TATILDMSFIDRH--------HGWLVG-VNATLMET-R------DGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWI-V 95 (327)
T ss_dssp SSCEEEEEESSSS--------CEEEEE-TTTEEEEE-S------STTSSCEECCCCCSCCCCEEEEEEEET--TEEEE-E
T ss_pred CCcEEEEEECCCC--------cEEEEc-CCCeEEEe-C------CCCCCCeECCCCCCCCCccEEEEEecC--CeEEE-E
Confidence 4468899987654 456644 56655332 2 12211122211 112244688899875 34444 4
Q ss_pred eCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeE
Q 046451 143 ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSV 222 (719)
Q Consensus 143 s~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~ 222 (719)
+.++.|+. ..+.++....+... ..+...+..+.+..++ .++++ +.+|.|+. ....++.-..........+..
T Consensus 96 g~~g~i~~-S~DgG~tW~~~~~~----~~~~~~~~~i~~~~~~-~~~~~-~~~g~v~~-S~DgG~tW~~~~~~~~~~~~~ 167 (327)
T 2xbg_A 96 GEPPIMLH-TTDGGQSWSQIPLD----PKLPGSPRLIKALGNG-SAEMI-TNVGAIYR-TKDSGKNWQALVQEAIGVMRN 167 (327)
T ss_dssp EETTEEEE-ESSTTSSCEECCCC----TTCSSCEEEEEEEETT-EEEEE-ETTCCEEE-ESSTTSSEEEEECSCCCCEEE
T ss_pred ECCCeEEE-ECCCCCCceECccc----cCCCCCeEEEEEECCC-CEEEE-eCCccEEE-EcCCCCCCEEeecCCCcceEE
Confidence 55665544 23334443332100 0122357778876664 35544 45665432 223344333333245567889
Q ss_pred EEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEE
Q 046451 223 LQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSE 302 (719)
Q Consensus 223 l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~ 302 (719)
+.+.+++ .+++++.... .++-+|-. +..-...-......+..+.+.+ ++.++ ..+.+|.+++.+...++....
T Consensus 168 ~~~~~~~-~~~~~g~~G~---~~~S~d~g-G~tW~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~G~~~~s~~D~G~tW~~ 240 (327)
T 2xbg_A 168 LNRSPSG-EYVAVSSRGS---FYSTWEPG-QTAWEPHNRTTSRRLHNMGFTP-DGRLW-MIVNGGKIAFSDPDNSENWGE 240 (327)
T ss_dssp EEECTTS-CEEEEETTSS---EEEEECTT-CSSCEEEECCSSSCEEEEEECT-TSCEE-EEETTTEEEEEETTEEEEECC
T ss_pred EEEcCCC-cEEEEECCCc---EEEEeCCC-CCceeECCCCCCCccceeEECC-CCCEE-EEeCCceEEEecCCCCCeeEe
Confidence 9999986 4555544332 33334421 1111111223456788999988 66544 556788888775433554433
Q ss_pred ecC----CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 046451 303 LPA----GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCS 341 (719)
Q Consensus 303 l~~----h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~ 341 (719)
+.. +...+.++.|.+++ .+++++. +|.| ++..+.++
T Consensus 241 ~~~~~~~~~~~~~~v~~~~~~-~~~~~g~-~g~i-~~S~DgG~ 280 (327)
T 2xbg_A 241 LLSPLRRNSVGFLDLAYRTPN-EVWLAGG-AGAL-LCSQDGGQ 280 (327)
T ss_dssp CBCTTSSCCSCEEEEEESSSS-CEEEEES-TTCE-EEESSTTS
T ss_pred ccCCcccCCcceEEEEecCCC-EEEEEeC-CCeE-EEeCCCCc
Confidence 331 22358899999876 5666655 7766 45555554
No 302
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.70 E-value=0.024 Score=68.66 Aligned_cols=336 Identities=13% Similarity=0.104 Sum_probs=166.4
Q ss_pred EEcCC-CC-eEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEc
Q 046451 14 AFAPD-AP-YMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGL 91 (719)
Q Consensus 14 afSpd-g~-~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs 91 (719)
.|.+. |. ..+++..+..|.+. .++.+.+++++.+ .+...........|.|+++.+...+. ....+++.|.
T Consensus 507 ~w~~p~~~~I~~As~n~~~vvva--~g~~l~~fel~~~----~L~~~~~~~l~~evscl~i~~~~~~~--~~s~~~aVg~ 578 (1158)
T 3ei3_A 507 EWKEPQAKNISVASCNSSQVVVA--VGRALYYLQIHPQ----ELRQISHTEMEHEVACLDITPLGDSN--GLSPLCAIGL 578 (1158)
T ss_dssp EECCTTCCCCCEEEECSSEEEEE--ETTEEEEEEEETT----EEEEEEEEECSSCEEEEECCCCSSST--TCCSEEEEEE
T ss_pred EEECCCCCEEEEEEeCCCEEEEE--ECCEEEEEEeeCC----ceeeecccCCCCceEEEEeecCCCCc--ccccEEEEEE
Confidence 56643 43 44444455555554 2456677777642 12222334456789999998653211 1226888888
Q ss_pred C-CCcEEEEcCCccccCCCCCCCCcee--eeccccCCEEEEEEeCC-CCCEEEEEeCCCcEEEEcCCC--CCCCCccCCc
Q 046451 92 V-DGSIDIWNPLSLISSGETGGNPLIA--HLSRHKGPVRGLEFNSF-TPNLLASGADDGEICIWDLSA--PAEPSHFPPL 165 (719)
Q Consensus 92 ~-dg~I~lwd~~~~~~~~~~~~~~~~~--~l~~h~~~V~~l~fsp~-~~~~lasgs~dg~I~iwdl~~--~~~~~~~~~l 165 (719)
. |++|+|+++... +.+. .+.. .....++.+... +..+|..|-.||.+.-+.++. +.....
T Consensus 579 ~~d~tv~I~sL~~l---------~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~---- 644 (1158)
T 3ei3_A 579 WTDISARILKLPSF---------ELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDR---- 644 (1158)
T ss_dssp TTTTEEEEEETTTC---------CEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEE----
T ss_pred CCCCEEEEEECCCC---------CeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccc----
Confidence 6 999999999532 2222 1211 123344444321 345788999999987666543 221100
Q ss_pred cCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCC-CcEEEEEeCCCCCCc
Q 046451 166 RGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDV-ATQLVVASDEDSSPA 244 (719)
Q Consensus 166 ~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g-~~~l~~~s~d~~~~~ 244 (719)
+....+ ...+.-..+...+..-+++ ..+.-..++.-+ ++....-. ....--....|+.+. ..-++....+ .
T Consensus 645 r~~~LG-~~pv~L~~~~~~~~~~V~a-~s~rp~liy~~~-~~l~~s~l-~~~~v~~~~~F~se~~~~g~v~~~~~----~ 716 (1158)
T 3ei3_A 645 KKVTLG-TQPTVLRTFRSLSTTNVFA-CSDRPTVIYSSN-HKLVFSNV-NLKEVNYMCPLNSDGYPDSLALANNS----T 716 (1158)
T ss_dssp EEEECC-SSCCEEEEEESSSCEEEEE-ESSSCEEEEESS-SSEEEEEB-SSSCCCEEEEECCSSSTTEEEEECSS----C
T ss_pred eeEEcC-CCceEEEEEeeCCceeEEE-ECCCCEEEEEcC-CceEEecc-ChHHhceEeccCcccCCCcEEEEcCC----c
Confidence 000011 1244444444444333333 334445555433 33222211 122222334454432 2234444433 5
Q ss_pred EEEEecCCCCC-ceEEeeCCCCCeeEEEeCCCCCCeEEEEeC--------------------------------------
Q 046451 245 LRLWDMRNTMS-PVKEFVGHTKGVIAMSWCPNDSSYLLTCAK-------------------------------------- 285 (719)
Q Consensus 245 I~lwDl~~~~~-~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~-------------------------------------- 285 (719)
++|..+.+..+ .++++. -...+..+++++ ..+.++.+..
T Consensus 717 LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (1158)
T 3ei3_A 717 LTIGTIDEIQKLHIRTVP-LYESPRKICYQE-VSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTA 794 (1158)
T ss_dssp EEEEEECCSSSEEEEEEE-CSSEEEEEEEEG-GGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC-----
T ss_pred eEEEEecccCCeeEEEEe-CCCCceEEEEcC-CCCEEEEEEEeccccccccccchhhhhhhhhhhhhccccccccccccc
Confidence 88887754322 122222 234567777777 4443332221
Q ss_pred -----------CCcEEEEECCCCeEEEEecCCC-CCeEEe---EEcCCCCCEEEEEe----------CCCcEEEEeCCCC
Q 046451 286 -----------DNRTICWDTVSGEIVSELPAGT-NWNFDI---HWYPKIPGVISASS----------FDGKIGIYNIEGC 340 (719)
Q Consensus 286 -----------Dg~I~iwd~~~~~~~~~l~~h~-~~v~~l---~~spdg~~~las~s----------~Dg~I~iwd~~~~ 340 (719)
-+.|+++|-.+++.+..+.-.. ..+.++ .|..+...+|+.|. ..|+|++|++.++
T Consensus 795 ~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~ 874 (1158)
T 3ei3_A 795 PHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG 874 (1158)
T ss_dssp -----CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETT
T ss_pred CchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECC
Confidence 1347788888888776654332 234444 45444446787776 2489999999866
Q ss_pred cccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCCCC
Q 046451 341 SRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 341 ~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~~~ 384 (719)
++....+.... +...+..-+.. .+..+.+.++++|.-....
T Consensus 875 kL~lv~~~~v~-g~v~al~~~~g--~Lla~ig~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 875 KLQTVAEKEVK-GAVYSMVEFNG--KLLASINSTVRLYEWTTEK 915 (1158)
T ss_dssp EEEEEEEEEES-SCEEEEEEETT--EEEEEETTEEEEEEECTTS
T ss_pred EEEEEEEEEcC-CcCEEEeeeCC--EEEEEcCCEEEEEECCCCc
Confidence 55443322222 11122111111 2344555666666655443
No 303
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.65 E-value=0.0046 Score=63.18 Aligned_cols=209 Identities=12% Similarity=0.097 Sum_probs=125.3
Q ss_pred ccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCC--CCCCCCeEEEEe---cCCCCcEEEEEe---
Q 046451 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNG--SAAQGEISFVSW---NSKVQHILASTS--- 193 (719)
Q Consensus 122 h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~--~~h~~~I~~l~~---sp~g~~~l~s~s--- 193 (719)
....-.+++|+..++.++++.-.+++|..||...+...... +.... ......+..|.| .+++ +++++..
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~--~~~~s~~g~~~~~~sGl~~~~~D~~g-rL~vv~~~~~ 87 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVV--IDGASSNGDGEQQMSGLSLLTHDNSK-RLFAVMKNAK 87 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEEC--CTTTCCSSCCSEEEEEEEESSSSSCC-EEEEEEEETT
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEe--cCCccccCCCcceeeEEEEeccCCCC-cEEEEEcccc
Confidence 34445688998844555555557999999998754322111 22111 011124679999 5775 5666543
Q ss_pred ----------CCCcEEEEECC---CCceeEEecCC------------CCCceeEEEECCCCCcEEEEEeCC-CCCCcEEE
Q 046451 194 ----------YNGTTVVWDLK---KQKPVISFSES------------IKRRCSVLQWNPDVATQLVVASDE-DSSPALRL 247 (719)
Q Consensus 194 ----------~dg~I~iwd~~---~~~~~~~~~~~------------~~~~i~~l~~sp~g~~~l~~~s~d-~~~~~I~l 247 (719)
.+..|..||+. +++.+...... ....+..++..++| +.+++++.. + .|..
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G-naYVt~s~~~~---~I~r 163 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG-NSYVAFALGMP---AIAR 163 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS-CEEEEEEESSC---EEEE
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCC-CEEEeCCCCCC---eEEE
Confidence 26789999999 77766554420 11358899999998 467777766 5 6666
Q ss_pred EecCCCCCceEEee------CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE-EEEec--CC---CCCeEEe-E
Q 046451 248 WDMRNTMSPVKEFV------GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI-VSELP--AG---TNWNFDI-H 314 (719)
Q Consensus 248 wDl~~~~~~~~~~~------~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~-~~~l~--~h---~~~v~~l-~ 314 (719)
+|... +.+..+. ......+.|+++| ++++|++...+|.|..+|+.+... ...+. +. ......| .
T Consensus 164 V~pdG--~~~~~~~~~~~~~~~~~G~nGIv~~p-dg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp 240 (334)
T 2p9w_A 164 VSADG--KTVSTFAWESGNGGQRPGYSGITFDP-HSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVT 240 (334)
T ss_dssp ECTTS--CCEEEEEECCCCSSSCCSCSEEEEET-TTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEE
T ss_pred EeCCC--CEEeeeeecCCCcccccCcceEEEeC-CCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccc
Confidence 66543 2222221 1223467999999 888888887799999999874322 01111 21 1223443 3
Q ss_pred EcCCCCCEEEEEeCCCcEEEEeCCCC
Q 046451 315 WYPKIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 315 ~spdg~~~las~s~Dg~I~iwd~~~~ 340 (719)
.-.+|.-+|++.+..+.+.+.+-+..
T Consensus 241 ~~~~G~vllV~~~~~~~~~l~S~DgW 266 (334)
T 2p9w_A 241 VPVGNESVLVGARAPYAISFRSWDNW 266 (334)
T ss_dssp EEETTEEEEEEEETTEEEEEECSSTT
T ss_pred cccCCEEEEEEcCCCCEEEEECCCCc
Confidence 33456334666666777777766553
No 304
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.64 E-value=0.003 Score=66.24 Aligned_cols=239 Identities=11% Similarity=0.088 Sum_probs=124.5
Q ss_pred CCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCC---CCcEEEEEeCC-----
Q 046451 124 GPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK---VQHILASTSYN----- 195 (719)
Q Consensus 124 ~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~---g~~~l~s~s~d----- 195 (719)
..-..++|.+ ++++++ +..+|.|++++ +++ ...+..+. ...........|+|+++ +..++++...+
T Consensus 31 ~~P~~ia~~p-dG~l~V-~e~~g~I~~i~--~g~-~~~~~~~~-v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 31 EVPWALAFLP-DGGMLI-AERPGRIRLFR--EGR-LSTYAELS-VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp SCEEEEEECT-TSCEEE-EETTTEEEEEE--TTE-EEEEEECC-CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred CCceEEEEcC-CCeEEE-EeCCCeEEEEE--CCC-ccEeecce-EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 4567999999 677554 56679999998 222 11110011 11112347889999998 44455554433
Q ss_pred CcEEEEECCCCc-----eeEE-ec--CCCCCceeEEEECCCCCcEEEEEeCCC----------CCCcEEEEecCCC----
Q 046451 196 GTTVVWDLKKQK-----PVIS-FS--ESIKRRCSVLQWNPDVATQLVVASDED----------SSPALRLWDMRNT---- 253 (719)
Q Consensus 196 g~I~iwd~~~~~-----~~~~-~~--~~~~~~i~~l~~sp~g~~~l~~~s~d~----------~~~~I~lwDl~~~---- 253 (719)
+.|..|+...++ .+.. +. .........|+|.+|| +++++.++.+ ..+.|.-+|....
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~ 183 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPG 183 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTT
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCC
Confidence 678888877432 1221 22 1112234689999999 5566544321 1135666665420
Q ss_pred --------CCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCc--------EEEEECCC----------------CeEEE
Q 046451 254 --------MSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNR--------TICWDTVS----------------GEIVS 301 (719)
Q Consensus 254 --------~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~--------I~iwd~~~----------------~~~~~ 301 (719)
........++ .....++|++.++.++++-...+. |.+..... ...+.
T Consensus 184 npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~ 262 (352)
T 2ism_A 184 NPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLY 262 (352)
T ss_dssp CTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSE
T ss_pred CcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeE
Confidence 0111111233 235678999844555544433332 33332111 01222
Q ss_pred EecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc---ccCCCCCCCCCccCcceecCCCceeeeeCCcEEEE
Q 046451 302 ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRY---GVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSF 378 (719)
Q Consensus 302 ~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~---~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~ 378 (719)
.+..| .....++|. +| .++++.-..+.|...+++..... ...+..+ ..| .++.+++++.||.+++.
T Consensus 263 ~~~~~-~ap~G~~~~-~G-~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~-------~~~-~rp~~v~~~pdG~lyv~ 331 (352)
T 2ism_A 263 FWPQG-FPPGNLAFF-RG-DLYVAGLRGQALLRLVLEGERGRWRVLRVETAL-------SGF-GRLREVQVGPDGALYVT 331 (352)
T ss_dssp ECTTC-CCEEEEEEE-TT-EEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE-------ESS-CCEEEEEECTTSCEEEE
T ss_pred ecCCC-CCCcceEEE-CC-EEEEEECCCCEEEEEEECCCCcceeecchheec-------ccC-CCeeEEEECCCCcEEEE
Confidence 23222 235677773 45 56666666677888777654321 1011111 112 35688999999998776
Q ss_pred ccC
Q 046451 379 HPK 381 (719)
Q Consensus 379 ~~~ 381 (719)
..+
T Consensus 332 ~~~ 334 (352)
T 2ism_A 332 TSN 334 (352)
T ss_dssp ECS
T ss_pred EeC
Confidence 644
No 305
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.59 E-value=0.005 Score=64.24 Aligned_cols=214 Identities=10% Similarity=0.052 Sum_probs=118.7
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEc-------------CCCcEEEEcCCccccCCCCCCCCceeeecc-----ccCCE
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGL-------------VDGSIDIWNPLSLISSGETGGNPLIAHLSR-----HKGPV 126 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs-------------~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~-----h~~~V 126 (719)
....++...++| ++++++ .+|.|.++|+.+. +. ..+.+ .+.+ ..-..
T Consensus 50 ~G~EDi~~~~~G---------~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~----~~-~~~~l-~~~g~~~~~~~f~P 114 (355)
T 3sre_A 50 NGSEDLEILPNG---------LAFISSGLKYPGIMSFDPDKSGKILLMDLNEK----EP-AVSEL-EIIGNTLDISSFNP 114 (355)
T ss_dssp SCCCEEEECTTS---------EEEEEECCC-----------CCEEEEEETTSS----SC-CEEEC-EEECSSCCGGGCCE
T ss_pred CCcceeEEcCCC---------eEEEEeccccCCCcccCCCCCCeEEEEecCCC----CC-ceEEE-EccCCCCCcCceee
Confidence 345577777765 455554 6899999998521 11 00111 2221 23466
Q ss_pred EEEEEeCC-CCC-EEEEE-eC--CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe--------
Q 046451 127 RGLEFNSF-TPN-LLASG-AD--DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS-------- 193 (719)
Q Consensus 127 ~~l~fsp~-~~~-~lasg-s~--dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s-------- 193 (719)
..|.+..+ ++. +|+++ .. +..|.||++........+ +.......-...+++.+.++| .++++..
T Consensus 115 hGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~--~~~~~g~~~~~pND~~v~~~G-~fyvt~~~~ftd~~~ 191 (355)
T 3sre_A 115 HGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLH--LKTIRHKLLPSVNDIVAVGPE-HFYATNDHYFIDPYL 191 (355)
T ss_dssp EEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEE--EEEECCTTCSSEEEEEEEETT-EEEEEESCSCSSHHH
T ss_pred eeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEE--EeccccCCCCCCceEEEeCCC-CEEecCCcEeCCccc
Confidence 77887652 232 44444 33 567888887665332221 111111123368899999997 3555543
Q ss_pred ---------CCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCc--eEEeeC
Q 046451 194 ---------YNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSP--VKEFVG 262 (719)
Q Consensus 194 ---------~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~--~~~~~~ 262 (719)
..|.|+.+|. ++.. .+. ..-..-+.|+|+||++.++++-+..+ .|+.||+...... .+.+ .
T Consensus 192 ~~~e~~~~~~~g~vyr~d~--~~~~-~~~-~~l~~pNGia~spDg~~lYvadt~~~---~I~~~~~~~~g~l~~~~~~-~ 263 (355)
T 3sre_A 192 KSWEMHLGLAWSFVTYYSP--NDVR-VVA-EGFDFANGINISPDGKYVYIAELLAH---KIHVYEKHANWTLTPLRVL-S 263 (355)
T ss_dssp HHHHHHTTCCCEEEEEECT--TCCE-EEE-EEESSEEEEEECTTSSEEEEEEGGGT---EEEEEEECTTSCEEEEEEE-E
T ss_pred ccchhhccCCccEEEEEEC--CeEE-Eee-cCCcccCcceECCCCCEEEEEeCCCC---eEEEEEECCCCcEecCEEE-e
Confidence 1244555554 3322 222 23456789999999977777666666 8999998643222 1233 2
Q ss_pred CCCCeeEEEeCCCCCCeEEEEeCC-CcEEEEECC--CCeEEEEec
Q 046451 263 HTKGVIAMSWCPNDSSYLLTCAKD-NRTICWDTV--SGEIVSELP 304 (719)
Q Consensus 263 h~~~V~~v~~sp~d~~~l~sgs~D-g~I~iwd~~--~~~~~~~l~ 304 (719)
.....-.+++...+|++.+++..+ ++|..||.. .+..+..+.
T Consensus 264 ~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 264 FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp CSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred CCCCCceEEEeCCCCcEEEEecCCceEEEEECCCCCCCCEEEEEE
Confidence 234566788876227777766644 355555554 355555554
No 306
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.59 E-value=0.0089 Score=62.66 Aligned_cols=241 Identities=9% Similarity=0.035 Sum_probs=126.4
Q ss_pred CCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCC---CCcEEEEEeC---C--
Q 046451 124 GPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK---VQHILASTSY---N-- 195 (719)
Q Consensus 124 ~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~---g~~~l~s~s~---d-- 195 (719)
.....++|.+ +++ |+++..+|.|+++|. +++ ..+..+. ...........|+|+++ +..++++-+. +
T Consensus 29 ~~P~~ia~~p-dG~-l~V~e~~g~I~~~d~-~G~--~~~~~~~-v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 29 EVPWSIAPLG-GGR-YLVTERPGRLVLISP-SGK--KLVASFD-VANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp SCEEEEEEEE-TTE-EEEEETTTEEEEECS-SCE--EEEEECC-CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred CCCeEEEEcC-CCe-EEEEeCCCEEEEEeC-CCc--eEeeccc-eeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence 4568999999 666 555566799999973 332 2221111 11112346889999997 4445554432 3
Q ss_pred --CcEEEEECCCC-------ceeE-EecCCCCCceeEEEECCCCCcEEEEEeCCC----------CCCcEEEEecCCCC-
Q 046451 196 --GTTVVWDLKKQ-------KPVI-SFSESIKRRCSVLQWNPDVATQLVVASDED----------SSPALRLWDMRNTM- 254 (719)
Q Consensus 196 --g~I~iwd~~~~-------~~~~-~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~----------~~~~I~lwDl~~~~- 254 (719)
..|..|+.... +.+. .+..........|+|.+|| +++++.++.+ ..+.|.-+|....-
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG-~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p 181 (354)
T 3a9g_A 103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG-MLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP 181 (354)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS-CEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC
T ss_pred cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC-cEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC
Confidence 56788887654 1111 1221122235679999999 4555544321 11356666654210
Q ss_pred ------CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCC---cEEEEECCC--------C--------eEEEEecCCCCC
Q 046451 255 ------SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDN---RTICWDTVS--------G--------EIVSELPAGTNW 309 (719)
Q Consensus 255 ------~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg---~I~iwd~~~--------~--------~~~~~l~~h~~~ 309 (719)
.......++ .....++|++.+++++++-...+ .|.+..... + ..+..+......
T Consensus 182 ~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~a 260 (354)
T 3a9g_A 182 ADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWA 260 (354)
T ss_dssp TTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCC
T ss_pred CCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcC
Confidence 011112233 34568999984455444432222 243332110 0 122333112234
Q ss_pred eEEeEEc-------CCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEcc
Q 046451 310 NFDIHWY-------PKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHP 380 (719)
Q Consensus 310 v~~l~~s-------pdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~ 380 (719)
...+.|. .+| .++++.-..+.|...+++........+..+.. -..++..++++.||.|++...
T Consensus 261 p~G~~~y~g~~fp~~~G-~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~-------~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRG-WLLIACLRGSMLAAVNFGDNMEVRKISTFFKN-------VFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEEECCSSSCGGGTT-EEEEEETTTTEEEEEEECGGGCEEEEEEECTT-------TSCCEEEEEECTTSCEEEEEC
T ss_pred CcceEEECCCCCcccCC-cEEEEEcCCCEEEEEEECCCCcccceeeeccC-------CCCCeeEEEECCCCcEEEEEe
Confidence 7888884 355 56666666778888888753211111111110 123567899999998877664
No 307
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.58 E-value=0.042 Score=55.67 Aligned_cols=232 Identities=12% Similarity=0.149 Sum_probs=144.1
Q ss_pred ceEEEEc---CCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCc
Q 046451 85 GLVAGGL---VDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSH 161 (719)
Q Consensus 85 ~~lasgs---~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~ 161 (719)
++++.-- .+.+|.|.|+.... ...+.-..- .+.-.+| ..+.||.-. ...+.|+|+++...+..
T Consensus 37 kyicVrE~~~~~~~VvIiDl~n~~--------~~~Rrpi~A----dsAIMnP-~~~ViALra-g~~LQiFnletK~klks 102 (365)
T 2xzh_A 37 KFICIREKVGEQAQVVIIDMNDPS--------NPIRRPISA----DSAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKA 102 (365)
T ss_dssp TEEEEEEEETTEEEEEEEETTSTT--------SCEEEECCC----SEEEECS-SSSEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred ceEEEEecCCCCCEEEEEECCCCC--------Ccccccccc----ceeeeCC-CccEEEEec-CCeEEEechHHhhhhcc
Confidence 4666543 33478999984311 112211111 2333477 566666655 67899999998876544
Q ss_pred cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC-CceeEEecC---CCCCceeEEEECCCCCcEEEEEe
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK-QKPVISFSE---SIKRRCSVLQWNPDVATQLVVAS 237 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~-~~~~~~~~~---~~~~~i~~l~~sp~g~~~l~~~s 237 (719)
+. ..+.|..=.|-.+. .|+..+. ..|+.|++.. ..+...|.. -....|..-..+++.+.++++|-
T Consensus 103 ~~--------~~e~VvfWkWis~~--~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 171 (365)
T 2xzh_A 103 HT--------MTDDVTFWKWISLN--TVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 171 (365)
T ss_dssp EE--------CSSCEEEEEECSSS--EEEEEES-SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEE
T ss_pred ee--------cCCccEEEEecCCC--eEEEEcC-CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeE
Confidence 21 23467777887663 5555554 4799999975 345555553 12466777888999877766665
Q ss_pred CC--C-CCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCC--CCCeEEEEeCC---CcEEEEECCCC--------eEEE
Q 046451 238 DE--D-SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPN--DSSYLLTCAKD---NRTICWDTVSG--------EIVS 301 (719)
Q Consensus 238 ~d--~-~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~--d~~~l~sgs~D---g~I~iwd~~~~--------~~~~ 301 (719)
.. + -.|.+.||..+. ..-..++||......+.+.-+ ...+|+.+... ++++|.++... +...
T Consensus 172 ~~~~~~v~G~mQLYS~er--~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~v 249 (365)
T 2xzh_A 172 SAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAV 249 (365)
T ss_dssp EEETTEEEEEEEEEETTT--TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEE
T ss_pred eccCCccceeEEEEeecc--cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccc
Confidence 32 1 134799999864 445778888765555544321 11234444332 68999998532 1111
Q ss_pred Ee----cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 302 EL----PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 302 ~l----~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
.+ +.-.+.-.++..+... .++..-+.-|.|++||++++.++.
T Consensus 250 di~fppea~~DFPVamqvs~ky-gviyviTK~G~ihlyDleTgt~i~ 295 (365)
T 2xzh_A 250 DVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGTCIY 295 (365)
T ss_dssp EECCCTTCTTCCEEEEEEETTT-TEEEEEETTSEEEEEETTTCCEEE
T ss_pred eeeCCccccCCceEEEEecccC-CEEEEEeCCcEEEEEEcccCcEEE
Confidence 11 1234556778888877 688889999999999999999865
No 308
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.56 E-value=0.0041 Score=64.10 Aligned_cols=194 Identities=11% Similarity=0.141 Sum_probs=120.4
Q ss_pred CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCC----CCc--EEEEEe-C--CCcEEEEECC-C
Q 046451 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK----VQH--ILASTS-Y--NGTTVVWDLK-K 205 (719)
Q Consensus 136 ~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~----g~~--~l~s~s-~--dg~I~iwd~~-~ 205 (719)
..+++....++-|.+||+ +++.+..+ . .+.++.+..-+. |+. ++++.. . +++|.+|++. .
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~---~------~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~ 109 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSY---N------TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGK 109 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEE---C------CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTT
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEc---c------CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCC
Confidence 356666677789999999 66655443 1 135566655442 111 333333 3 5799999774 2
Q ss_pred CceeEEecCC-----CC-CceeEEEE--CCCCC-cEEEEEeCCCCCCcEEEEecCCC------CCceEEeeCCCCCeeEE
Q 046451 206 QKPVISFSES-----IK-RRCSVLQW--NPDVA-TQLVVASDEDSSPALRLWDMRNT------MSPVKEFVGHTKGVIAM 270 (719)
Q Consensus 206 ~~~~~~~~~~-----~~-~~i~~l~~--sp~g~-~~l~~~s~d~~~~~I~lwDl~~~------~~~~~~~~~h~~~V~~v 270 (719)
...+..+... .. ..+..+++ ++... .++++...++ .+..|++... .+.+++|... ..+..|
T Consensus 110 ~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G---~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~Egc 185 (355)
T 3amr_A 110 NGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEG---EFEQYELKADKNGYISGKKVRAFKMN-SQTEGM 185 (355)
T ss_dssp TCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSS---EEEEEEEEECTTSCEEEEEEEEEECS-SCEEEE
T ss_pred CCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCC---eEEEEEEEeCCCCcccceEEEEecCC-CCcceE
Confidence 2234444210 12 56777888 77543 3566666665 8999888431 1345666543 567788
Q ss_pred EeCCCCCCeEEEEeCCCcEEEEECC-----CCeEEEEec-CC-CCCeEEeEE--cCCCC-CEEEEEeCCCcEEEEeCC-C
Q 046451 271 SWCPNDSSYLLTCAKDNRTICWDTV-----SGEIVSELP-AG-TNWNFDIHW--YPKIP-GVISASSFDGKIGIYNIE-G 339 (719)
Q Consensus 271 ~~sp~d~~~l~sgs~Dg~I~iwd~~-----~~~~~~~l~-~h-~~~v~~l~~--spdg~-~~las~s~Dg~I~iwd~~-~ 339 (719)
...+ ....|+.+-+|.-|..||.+ +++.+..+. ++ ...+..|++ .+++. ++|+++-.++++.|||.+ +
T Consensus 186 vvDd-~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~ 264 (355)
T 3amr_A 186 AADD-EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGK 264 (355)
T ss_dssp EEET-TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred EEcC-CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCC
Confidence 8887 77889999998777777755 456666653 22 235888888 45553 466666578899999997 4
Q ss_pred Ccccc
Q 046451 340 CSRYG 344 (719)
Q Consensus 340 ~~~~~ 344 (719)
.+.++
T Consensus 265 ~~~vg 269 (355)
T 3amr_A 265 NKYVA 269 (355)
T ss_dssp CCEEE
T ss_pred CcEEE
Confidence 44433
No 309
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.47 E-value=0.086 Score=55.51 Aligned_cols=232 Identities=12% Similarity=0.161 Sum_probs=144.5
Q ss_pred ceEEEEc---CCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCc
Q 046451 85 GLVAGGL---VDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSH 161 (719)
Q Consensus 85 ~~lasgs---~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~ 161 (719)
++++.-- .+..|.|.|+.... ...+.-. ...+.-.+| ..+.||.-. ..++.|+|+++...+..
T Consensus 36 kyicVrE~~~~~~~vvIiDl~~~~--------~~~rrpi----~AdsAIMnP-~~~iiALra-g~~lQiFnle~K~klks 101 (494)
T 1bpo_A 36 KFICIREKVGEQAQVVIIDMNDPS--------NPIRRPI----SADSAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKA 101 (494)
T ss_dssp TEEEEEECCTTCCEEEEEETTSTT--------SCEEEEC----CCSEEEECS-SSSCEEEEE-TTEEEEEETTTTEEEEE
T ss_pred ceEEEEecCCCCCeEEEEECCCCC--------cceeccc----ccceeeeCC-CCcEEEEec-CCeEEEEchHHhhhhcc
Confidence 4666543 33479999984311 1111111 112334567 556666654 68999999998776544
Q ss_pred cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC-CceeEEecC---CCCCceeEEEECCCCCcEEEEEe
Q 046451 162 FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK-QKPVISFSE---SIKRRCSVLQWNPDVATQLVVAS 237 (719)
Q Consensus 162 ~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~-~~~~~~~~~---~~~~~i~~l~~sp~g~~~l~~~s 237 (719)
+. ....|..=.|-.+ +.|+..+ +..|+-|++.. ..+...|.. -....|..-..+++.+.++++|-
T Consensus 102 ~~--------~~e~VvfWkWis~--~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 170 (494)
T 1bpo_A 102 HT--------MTDDVTFWKWISL--NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 170 (494)
T ss_dssp EE--------CSSCCCEEEEEET--TEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEE
T ss_pred ee--------cCCCceEEEecCC--CeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEee
Confidence 21 1235666677665 2555554 35799999975 345555553 12467777888999877666665
Q ss_pred CCC---CCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCC--CCCeEEEEeCC---CcEEEEECCCC--------eEEE
Q 046451 238 DED---SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPN--DSSYLLTCAKD---NRTICWDTVSG--------EIVS 301 (719)
Q Consensus 238 ~d~---~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~--d~~~l~sgs~D---g~I~iwd~~~~--------~~~~ 301 (719)
... -.|.+.+|..+. ..-..++||......+.+.-+ ...+|+.+... ++++|.++... +...
T Consensus 171 ~~~~~~v~G~mQLYS~er--~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~v 248 (494)
T 1bpo_A 171 SAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAV 248 (494)
T ss_dssp EEETTEEEEEEEEEESTT--CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEE
T ss_pred cccCCcccceEEEeeccc--cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceee
Confidence 321 134799999875 445778888766666555421 11244444433 78999998542 1111
Q ss_pred Ee----cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 302 EL----PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 302 ~l----~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
.+ +.-.+.-.++..++.. .++..-+.-|.|++||++++.++-
T Consensus 249 dv~fppe~~~DFPvamqvs~ky-gviyviTK~G~i~lyDleTgt~i~ 294 (494)
T 1bpo_A 249 DVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGTCIY 294 (494)
T ss_dssp ECCCCTTSTTCCEEEEEEETTT-TEEEEEETTSEEEEEETTTCCEEE
T ss_pred eeeCCcccccCceeEEEecccC-CEEEEEecCceEEEEecccceeee
Confidence 21 1234556778888887 688899999999999999999865
No 310
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.39 E-value=0.016 Score=58.83 Aligned_cols=190 Identities=8% Similarity=0.053 Sum_probs=98.9
Q ss_pred CCCEEEEEeCC-----CcEEEEcCCCCCC--CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC-----CcEEEEE
Q 046451 135 TPNLLASGADD-----GEICIWDLSAPAE--PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN-----GTTVVWD 202 (719)
Q Consensus 135 ~~~~lasgs~d-----g~I~iwdl~~~~~--~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d-----g~I~iwd 202 (719)
++.+++.|+.+ ..+.+||+.+.+. ...+..+... ......+.+ ++ .+++.|+.+ ..+.+||
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~----r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~d 134 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR----RGLAGATTL--GD-MIYVSGGFDGSRRHTSMERYD 134 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC----CBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC----ccceeEEEE--CC-EEEEEcccCCCcccceEEEEc
Confidence 55777777755 4689999887651 2222222211 112223333 33 577777643 3688999
Q ss_pred CCCCceeEEecC-CCCCceeEEEECCCCCcEEEEEeCCCC--CCcEEEEecCCCCCceEEee---CCCCCeeEEEeCCCC
Q 046451 203 LKKQKPVISFSE-SIKRRCSVLQWNPDVATQLVVASDEDS--SPALRLWDMRNTMSPVKEFV---GHTKGVIAMSWCPND 276 (719)
Q Consensus 203 ~~~~~~~~~~~~-~~~~~i~~l~~sp~g~~~l~~~s~d~~--~~~I~lwDl~~~~~~~~~~~---~h~~~V~~v~~sp~d 276 (719)
+.+.+-...-.. ........+.+ ++ .+++.|+.++. ...+.+||+.+.. -..+. ........+.+ +
T Consensus 135 ~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~---~ 206 (301)
T 2vpj_A 135 PNIDQWSMLGDMQTAREGAGLVVA--SG-VIYCLGGYDGLNILNSVEKYDPHTGH--WTNVTPMATKRSGAGVALL---N 206 (301)
T ss_dssp TTTTEEEEEEECSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE---T
T ss_pred CCCCeEEECCCCCCCcccceEEEE--CC-EEEEECCCCCCcccceEEEEeCCCCc--EEeCCCCCcccccceEEEE---C
Confidence 887653322111 11122222222 43 57777765532 2368999987542 12221 11111222222 5
Q ss_pred CCeEEEEeCC-----CcEEEEECCCCeEEEE--ecCCCCCeEEeEEcCCCCCEEEEEeCC-----CcEEEEeCCCCcc
Q 046451 277 SSYLLTCAKD-----NRTICWDTVSGEIVSE--LPAGTNWNFDIHWYPKIPGVISASSFD-----GKIGIYNIEGCSR 342 (719)
Q Consensus 277 ~~~l~sgs~D-----g~I~iwd~~~~~~~~~--l~~h~~~v~~l~~spdg~~~las~s~D-----g~I~iwd~~~~~~ 342 (719)
+.+++.|+.+ +.|.+||+.+.+-... +.........+.+ ++ .+++.|+.+ ..|.+||+++.+.
T Consensus 207 ~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 207 DHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RG-RLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred CEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CC-EEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 6777777764 5689999987754332 2211111222222 44 577777765 3577888876554
No 311
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.32 E-value=0.054 Score=56.14 Aligned_cols=247 Identities=13% Similarity=0.112 Sum_probs=129.8
Q ss_pred ccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCC---CCcEEEEEe--CCC
Q 046451 122 HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK---VQHILASTS--YNG 196 (719)
Q Consensus 122 h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~---g~~~l~s~s--~dg 196 (719)
.-...+.|+|.+ ++++|++--..|.|++++..++.. ..+..+.............|+|+|+ +..++++-+ .++
T Consensus 30 gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~-~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~ 107 (347)
T 3das_A 30 GLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRK-TELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDN 107 (347)
T ss_dssp CCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSE
T ss_pred CCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcE-eeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCC
Confidence 345678999999 777776665589999998654432 1111011111223457899999985 233444322 345
Q ss_pred cEEEEECCCC----------ceeE-EecCCCCCceeEEEECCCCCcEEEEEeCCC----------CCCcEEEEecCCCC-
Q 046451 197 TTVVWDLKKQ----------KPVI-SFSESIKRRCSVLQWNPDVATQLVVASDED----------SSPALRLWDMRNTM- 254 (719)
Q Consensus 197 ~I~iwd~~~~----------~~~~-~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~----------~~~~I~lwDl~~~~- 254 (719)
.|.-|.+..+ +.+. .+..........|.|.+|| +++++.++.+ ..+.|.-++....-
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG-~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip 186 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK-MLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA 186 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS-CEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC-CEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence 6666766542 1121 2221222345679999999 4666654321 12345555554210
Q ss_pred --C---ceEEe-eCCCCCeeEEEeCCCCCCeEEEEe-CCCcEEEEECCCCe------------------EEEEecCCCCC
Q 046451 255 --S---PVKEF-VGHTKGVIAMSWCPNDSSYLLTCA-KDNRTICWDTVSGE------------------IVSELPAGTNW 309 (719)
Q Consensus 255 --~---~~~~~-~~h~~~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~~~~------------------~~~~l~~h~~~ 309 (719)
. ....+ .+|. ....++|++ ++.++++-. .|+.-.|.-+..|. .+..+..+...
T Consensus 187 ~~nPf~~~~i~a~G~R-Np~Gla~dp-~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~a 264 (347)
T 3das_A 187 PGNPFPGSPVYSYGHR-NVQGLAWDD-KQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEAS 264 (347)
T ss_dssp TTCSSTTCCEEEBCCS-BCCEEEECT-TCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCC
T ss_pred CCCCCCCCeEEeeCCC-CcceEEECC-CCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCC
Confidence 0 01112 2443 456899999 766555432 23222222222221 12222222234
Q ss_pred eEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCC
Q 046451 310 NFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKS 382 (719)
Q Consensus 310 v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~ 382 (719)
...++|.. + .+++..-..++|....++....+...+..+.. -..++..+..+.||.|++...+.
T Consensus 265 p~G~~~~~-g-~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~-------~~gR~~dv~~~pDG~lyv~td~~ 328 (347)
T 3das_A 265 PSGIAYAE-G-SVWMAGLRGERLWRIPLKGTAAAADPQAFLEG-------EYGRLRTVAPAGGDKLWLVTSNT 328 (347)
T ss_dssp EEEEEEET-T-EEEEEESTTCSEEEEEEETTEESSCCEEESTT-------TSSCEEEEEEEETTEEEEEECTT
T ss_pred CcceEEEc-C-ceeeccccCCEEEEEEecCCceecceEEeecC-------CCCCccEEEECCCCcEEEEEcCC
Confidence 66778874 4 46666555667777777665432222222221 12466889999999987765443
No 312
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.32 E-value=0.006 Score=62.33 Aligned_cols=160 Identities=13% Similarity=0.106 Sum_probs=101.8
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEE-ecC-----CCCCceeEEEE---CCCCCcEEEEEeCC------
Q 046451 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVIS-FSE-----SIKRRCSVLQW---NPDVATQLVVASDE------ 239 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~-~~~-----~~~~~i~~l~~---sp~g~~~l~~~s~d------ 239 (719)
.-.+++|+.....++++.-..++|..||...+..... +.. .....+..|.| .+++ .++++....
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~g-rL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSK-RLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCC-EEEEEEEETTTTCTT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCC-cEEEEEccccccccc
Confidence 3457899887655555555799999999986543333 221 01124689999 6885 455543310
Q ss_pred ----CCCCcEEEEecC---CCCCceEEee--CC-----------CCCeeEEEeCCCCCCeEEEEeCC-CcEEEEECCCCe
Q 046451 240 ----DSSPALRLWDMR---NTMSPVKEFV--GH-----------TKGVIAMSWCPNDSSYLLTCAKD-NRTICWDTVSGE 298 (719)
Q Consensus 240 ----~~~~~I~lwDl~---~~~~~~~~~~--~h-----------~~~V~~v~~sp~d~~~l~sgs~D-g~I~iwd~~~~~ 298 (719)
.....|..||+. ++.. +.... .. ......++..+ +|+..++++.. +.|..+|... +
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~-~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG-~ 169 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKP-VWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADG-K 169 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCC-SEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTS-C
T ss_pred ccccCCCCEEEEEcCCcCCCCCE-EEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCC-C
Confidence 012379999998 5433 32221 11 12478999999 89999989888 8888887753 3
Q ss_pred EEEEec--C----CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 299 IVSELP--A----GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 299 ~~~~l~--~----h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
.+..+. . .....+.|+++|+| ++|++...+|.|..+|+..
T Consensus 170 ~~~~~~~~~~~~~~~~G~nGIv~~pdg-~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 170 TVSTFAWESGNGGQRPGYSGITFDPHS-NKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CEEEEEECCCCSSSCCSCSEEEEETTT-TEEEEESSSSSEEEEECSS
T ss_pred EEeeeeecCCCcccccCcceEEEeCCC-CEEEEEcCCCeEEEEcCCC
Confidence 332221 1 11236789999999 5555554499999999984
No 313
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.31 E-value=0.013 Score=61.38 Aligned_cols=236 Identities=11% Similarity=0.082 Sum_probs=120.5
Q ss_pred CceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeee---ccccCCEEEEEEeCC---CCCEE
Q 046451 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL---SRHKGPVRGLEFNSF---TPNLL 139 (719)
Q Consensus 66 ~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l---~~h~~~V~~l~fsp~---~~~~l 139 (719)
.-..|+|.++| + |+++..+|.|++++ .. +. ..+..+ .........|+|+++ ++.++
T Consensus 32 ~P~~ia~~pdG--------~-l~V~e~~g~I~~i~-~g-----~~---~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lY 93 (352)
T 2ism_A 32 VPWALAFLPDG--------G-MLIAERPGRIRLFR-EG-----RL---STYAELSVYHRGESGLLGLALHPRFPQEPYVY 93 (352)
T ss_dssp CEEEEEECTTS--------C-EEEEETTTEEEEEE-TT-----EE---EEEEECCCCCSTTCSEEEEEECTTTTTSCEEE
T ss_pred CceEEEEcCCC--------e-EEEEeCCCeEEEEE-CC-----Cc---cEeecceEeecCCCCceeEEECCCCCCCCEEE
Confidence 45689999997 4 44555679999987 21 11 112111 122456789999983 23444
Q ss_pred EEEeCC-----CcEEEEcCCCCCC--CCcc-CCccC-CCCCCCCCeEEEEecCCCCcEEEEEeC-------------CCc
Q 046451 140 ASGADD-----GEICIWDLSAPAE--PSHF-PPLRG-NGSAAQGEISFVSWNSKVQHILASTSY-------------NGT 197 (719)
Q Consensus 140 asgs~d-----g~I~iwdl~~~~~--~~~~-~~l~~-~~~~h~~~I~~l~~sp~g~~~l~s~s~-------------dg~ 197 (719)
++-..+ +.|..|++..... ...+ ..+.. ....| ....|+|.++| .++++.+. .|.
T Consensus 94 v~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h--~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~~~~~g~ 170 (352)
T 2ism_A 94 AYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLH--SGGRIAFGPDG-MLYVTTGEVYERELAQDLASLGGK 170 (352)
T ss_dssp EEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCC--CCCCEEECTTS-CEEEECCCTTCGGGGGCTTCSSSE
T ss_pred EEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCc--CCceEEECCCC-CEEEEECCCCCCccccCCCCCceE
Confidence 443332 6788888764311 0111 00110 01122 23589999998 45555332 255
Q ss_pred EEEEECCCC------------ceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCC-----CCcEEEEecCC--------
Q 046451 198 TVVWDLKKQ------------KPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS-----SPALRLWDMRN-------- 252 (719)
Q Consensus 198 I~iwd~~~~------------~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~-----~~~I~lwDl~~-------- 252 (719)
|.-+|.... .....+..++ .....++|+++...++++-...+. ...|.+..--.
T Consensus 171 I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~ 249 (352)
T 2ism_A 171 ILRLTPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVV 249 (352)
T ss_dssp EEEECTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCC
T ss_pred EEEEcCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCccc
Confidence 666665431 0111111112 335678999943356665544331 00133332111
Q ss_pred -------CCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCe----E--EEEecCCCCCeEEeEEcCCC
Q 046451 253 -------TMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGE----I--VSELPAGTNWNFDIHWYPKI 319 (719)
Q Consensus 253 -------~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~----~--~~~l~~h~~~v~~l~~spdg 319 (719)
...++..+. +......++|. ++.++++.-..+.|...++.... . ...+-.....+.++++.+||
T Consensus 250 g~~~~~~~~~p~~~~~-~~~ap~G~~~~--~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG 326 (352)
T 2ism_A 250 GRGNDPRYRDPLYFWP-QGFPPGNLAFF--RGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDG 326 (352)
T ss_dssp SCCCCTTSCCCSEECT-TCCCEEEEEEE--TTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTS
T ss_pred CCCCCCCCcCCeEecC-CCCCCcceEEE--CCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCC
Confidence 011233332 22345677774 56666666667778877765332 1 12222223568999999999
Q ss_pred CCEEEEEe
Q 046451 320 PGVISASS 327 (719)
Q Consensus 320 ~~~las~s 327 (719)
.++++..
T Consensus 327 -~lyv~~~ 333 (352)
T 2ism_A 327 -ALYVTTS 333 (352)
T ss_dssp -CEEEEEC
T ss_pred -cEEEEEe
Confidence 5555543
No 314
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.30 E-value=0.017 Score=58.64 Aligned_cols=194 Identities=9% Similarity=0.041 Sum_probs=98.2
Q ss_pred CCCEEEEEeCC-----CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCC-----cEEEEECC
Q 046451 135 TPNLLASGADD-----GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNG-----TTVVWDLK 204 (719)
Q Consensus 135 ~~~~lasgs~d-----g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg-----~I~iwd~~ 204 (719)
++.+++.|+.+ ..+.+||..+.+- ..+..+... ......+.+ ++ .+++.|+.++ .+.+||+.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~----r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~ 132 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQW-TSVANMRDR----RSTLGAAVL--NG-LLYAVGGFDGSTGLSSVEAYNIK 132 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEE-EEECCCSSC----CBSCEEEEE--TT-EEEEEEEECSSCEEEEEEEEETT
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCce-eeCCCCCcc----ccceEEEEE--CC-EEEEEcCCCCCccCceEEEEeCC
Confidence 55677777754 3588899876542 222112211 112222333 33 5777777553 57889988
Q ss_pred CCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCC----CCcEEEEecCCCC-CceEEeeCCCCCeeEEEeCCCCCCe
Q 046451 205 KQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDS----SPALRLWDMRNTM-SPVKEFVGHTKGVIAMSWCPNDSSY 279 (719)
Q Consensus 205 ~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~----~~~I~lwDl~~~~-~~~~~~~~h~~~V~~v~~sp~d~~~ 279 (719)
+.+-...-.......-.+++.. ++ .+++.|+.++. ...+.+||+.+.. ..+..+.........+.+ ++.+
T Consensus 133 ~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i 207 (302)
T 2xn4_A 133 SNEWFHVAPMNTRRSSVGVGVV-GG-LLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL---NNLL 207 (302)
T ss_dssp TTEEEEECCCSSCCBSCEEEEE-TT-EEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEE
T ss_pred CCeEeecCCCCCcccCceEEEE-CC-EEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE---CCEE
Confidence 7654332111111111222222 33 56777665332 2368999987542 111111111111222222 5677
Q ss_pred EEEEeCC-----CcEEEEECCCCeEEEE--ecCCCCCeEEeEEcCCCCCEEEEEeCCC-----cEEEEeCCCCcccc
Q 046451 280 LLTCAKD-----NRTICWDTVSGEIVSE--LPAGTNWNFDIHWYPKIPGVISASSFDG-----KIGIYNIEGCSRYG 344 (719)
Q Consensus 280 l~sgs~D-----g~I~iwd~~~~~~~~~--l~~h~~~v~~l~~spdg~~~las~s~Dg-----~I~iwd~~~~~~~~ 344 (719)
++.|+.+ +.+.+||+.+.+-... +........ +... ++ .+++.|+.++ .+.+||+++.+...
T Consensus 208 yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~-~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 281 (302)
T 2xn4_A 208 YAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAG-VCAV-NG-LLYVVGGDDGSCNLASVEYYNPTTDKWTV 281 (302)
T ss_dssp EEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCE-EEEE-TT-EEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred EEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCe-EEEE-CC-EEEEECCcCCCcccccEEEEcCCCCeEEE
Confidence 7777764 4689999987654322 211111112 2222 44 5777777654 48889988876544
No 315
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.29 E-value=0.068 Score=55.83 Aligned_cols=239 Identities=11% Similarity=0.060 Sum_probs=124.3
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeee---ccccCCEEEEEEeCC---CCCE
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL---SRHKGPVRGLEFNSF---TPNL 138 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l---~~h~~~V~~l~fsp~---~~~~ 138 (719)
.....|+|.+++ + |+++..+|.|++++. ++. ..+..+ .........|+|+++ ++.+
T Consensus 29 ~~P~~ia~~pdG--------~-l~V~e~~g~I~~~d~-------~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~l 90 (354)
T 3a9g_A 29 EVPWSIAPLGGG--------R-YLVTERPGRLVLISP-------SGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWV 90 (354)
T ss_dssp SCEEEEEEEETT--------E-EEEEETTTEEEEECS-------SCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEE
T ss_pred CCCeEEEEcCCC--------e-EEEEeCCCEEEEEeC-------CCc--eEeeccceeecCCCceeeEEeCCCCCcCCEE
Confidence 346789999997 4 555566799999873 120 112111 122356889999983 3444
Q ss_pred EEEEeC---C----CcEEEEcCCCCC-CC---Ccc-CCccCCCCCCCCCeEEEEecCCCCcEEEEEeC------------
Q 046451 139 LASGAD---D----GEICIWDLSAPA-EP---SHF-PPLRGNGSAAQGEISFVSWNSKVQHILASTSY------------ 194 (719)
Q Consensus 139 lasgs~---d----g~I~iwdl~~~~-~~---~~~-~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~------------ 194 (719)
+++-+. + ..|..|+..... .. ..+ ..+. ....| ....|.|.++| .++++.+.
T Consensus 91 yv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~-~~~~h--~~~~l~~~pDG-~Lyvt~G~~~~~~~~~d~~~ 166 (354)
T 3a9g_A 91 YLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIP-GAYIH--NGGRIRFGPDG-MLYITTGDAADPRLAQDLSS 166 (354)
T ss_dssp EEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEE-CCSSC--CCCCEEECTTS-CEEEECCCTTCGGGGTCTTC
T ss_pred EEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCC-CCCCc--CCceEEECCCC-cEEEEECCCCCCccccCCCC
Confidence 444332 3 567777766431 00 111 0011 11122 34579999998 45555332
Q ss_pred -CCcEEEEECCCCc-------eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCC--------------
Q 046451 195 -NGTTVVWDLKKQK-------PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRN-------------- 252 (719)
Q Consensus 195 -dg~I~iwd~~~~~-------~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~-------------- 252 (719)
.|.|.-+|....- ....+..++ .....++|+++...++++-...+....|.+...-.
T Consensus 167 ~~G~I~ri~~dG~~p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~ 245 (354)
T 3a9g_A 167 LAGKILRVDEEGRPPADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRG 245 (354)
T ss_dssp CSSEEEEECTTSCCCTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCT
T ss_pred CCeEEEEEcCCCCCCCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCC
Confidence 2456656554220 011111122 33567999994335555544332111244332110
Q ss_pred -CCCceEEeeCCCCCeeEEEeCC------CCCCeEEEEeCCCcEEEEECCCC-eEE--EEe-cCCCCCeEEeEEcCCCCC
Q 046451 253 -TMSPVKEFVGHTKGVIAMSWCP------NDSSYLLTCAKDNRTICWDTVSG-EIV--SEL-PAGTNWNFDIHWYPKIPG 321 (719)
Q Consensus 253 -~~~~~~~~~~h~~~V~~v~~sp------~d~~~l~sgs~Dg~I~iwd~~~~-~~~--~~l-~~h~~~v~~l~~spdg~~ 321 (719)
...++..+.........++|.. .++.++++.-..+.|...++... +.. ..+ .+....+.++++.+|| .
T Consensus 246 ~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG-~ 324 (354)
T 3a9g_A 246 EFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDG-G 324 (354)
T ss_dssp TSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTS-C
T ss_pred CCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCC-c
Confidence 0012333311224567788842 15666666666778888888743 322 233 2334568999999999 5
Q ss_pred EEEEEe
Q 046451 322 VISASS 327 (719)
Q Consensus 322 ~las~s 327 (719)
++++..
T Consensus 325 lyv~~~ 330 (354)
T 3a9g_A 325 ILISTS 330 (354)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 666654
No 316
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.29 E-value=0.049 Score=56.93 Aligned_cols=242 Identities=12% Similarity=0.052 Sum_probs=126.1
Q ss_pred cCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCC---CCcEEEEEeC-----
Q 046451 123 KGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK---VQHILASTSY----- 194 (719)
Q Consensus 123 ~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~---g~~~l~s~s~----- 194 (719)
-.....|+|.+ +++.|+++..+|.|++++.... ....+..+.............|+|+|+ +..++++-+.
T Consensus 17 l~~P~~i~~~p-dG~~l~V~e~~G~i~~~~~~g~-~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 17 LDHPWALAFLP-DNHGMLITLRGGELRHWQAGKG-LSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp ESSEEEEEECS-TTCCEEEEETTTEEEEEETTTE-ECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCCcEEEEEcC-CCCEEEEEeCCceEEEEeCCCc-eeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 34568999999 7773445567899999985322 111111111111122346789999995 4445554333
Q ss_pred --CCcEEEEECCCCc----eeEE-ecC-----CCCCceeEEEECCCCCcEEEEEeCCCC----------CCcEEEEecCC
Q 046451 195 --NGTTVVWDLKKQK----PVIS-FSE-----SIKRRCSVLQWNPDVATQLVVASDEDS----------SPALRLWDMRN 252 (719)
Q Consensus 195 --dg~I~iwd~~~~~----~~~~-~~~-----~~~~~i~~l~~sp~g~~~l~~~s~d~~----------~~~I~lwDl~~ 252 (719)
...|..|++.... .... +.. ........|+|.+|| +++++.++.++ .+.|.-+|...
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGENNQRPTAQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECCTTCGGGGGCTTSCTTEEEEEETTS
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECCCCCCCccCCCCCCCeEEEEECCCC
Confidence 2356667765431 1111 110 011224679999998 45555544221 23566666643
Q ss_pred CC-----------CceEEe-eCCCCCeeEEEeCCCCCCeEEEEeCC--CcEEEEECCCCe--------------------
Q 046451 253 TM-----------SPVKEF-VGHTKGVIAMSWCPNDSSYLLTCAKD--NRTICWDTVSGE-------------------- 298 (719)
Q Consensus 253 ~~-----------~~~~~~-~~h~~~V~~v~~sp~d~~~l~sgs~D--g~I~iwd~~~~~-------------------- 298 (719)
.- .....+ .+| .....++|++.+++ |+++... +.=.|.-+..+.
T Consensus 174 ~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~-l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~ 251 (353)
T 2g8s_A 174 EIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNA-LWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPE 251 (353)
T ss_dssp CCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTE-EEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTT
T ss_pred CCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCC-EEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCc
Confidence 20 011111 233 34678999983344 4443322 111222222111
Q ss_pred -----------EEEEecCCCCCeEEeEEcC-------CCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcce
Q 046451 299 -----------IVSELPAGTNWNFDIHWYP-------KIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKW 360 (719)
Q Consensus 299 -----------~~~~l~~h~~~v~~l~~sp-------dg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w 360 (719)
.+..+..| .....+.|.. +| .++++.-..+.|...++++++.... +..+ ..|
T Consensus 252 ~~~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g-~l~v~~~~~~~v~~~~~~~~~~~~~-~~~~-------~~~ 321 (353)
T 2g8s_A 252 AKGEIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQ-KLFIGALKDKDVIVMSVNGDKVTED-GRIL-------TDR 321 (353)
T ss_dssp CCBSSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTT-EEEEEETTTTEEEEEEEETTEEEEE-EEES-------GGG
T ss_pred ccCCCCCCccCCeEEeCCC-cCcceeEEECCccCcccCC-cEEEEEccCCEEEEEEeCCCeEeee-EEcc-------cCC
Confidence 11122222 3467788864 34 5666666678888888876543221 1111 124
Q ss_pred ecCCCceeeeeCCcEEEEc
Q 046451 361 YKRPAGASFGFGGKLVSFH 379 (719)
Q Consensus 361 ~~~~~~~s~s~~Gklv~~~ 379 (719)
..++.+++++.||.|++.+
T Consensus 322 ~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 322 GQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp CCCEEEEEECTTSCEEEEE
T ss_pred CCceeEEEECCCCcEEEEE
Confidence 5577889999999987764
No 317
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.21 E-value=0.042 Score=57.43 Aligned_cols=250 Identities=11% Similarity=0.050 Sum_probs=125.4
Q ss_pred CceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCce-eeeccccCCEEEEEEeCC---CCCEEEE
Q 046451 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLI-AHLSRHKGPVRGLEFNSF---TPNLLAS 141 (719)
Q Consensus 66 ~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~-~~l~~h~~~V~~l~fsp~---~~~~las 141 (719)
....|+|.+++ +.|+++...|.|++++...... ..- ..+ ..+....+....|+|+|+ ++.+.++
T Consensus 19 ~P~~i~~~pdG--------~~l~V~e~~G~i~~~~~~g~~~-~~~---~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 19 HPWALAFLPDN--------HGMLITLRGGELRHWQAGKGLS-APL---SGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp SEEEEEECSTT--------CCEEEEETTTEEEEEETTTEEC-CCC---BSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CcEEEEEcCCC--------CEEEEEeCCceEEEEeCCCcee-eEe---cCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 45689999997 5255556789999997532110 000 000 011122346789999983 3444444
Q ss_pred EeC-------CCcEEEEcCCCCCC----CCcc-CCccC-CCCCCCCCeEEEEecCCCCcEEEEEeC-------------C
Q 046451 142 GAD-------DGEICIWDLSAPAE----PSHF-PPLRG-NGSAAQGEISFVSWNSKVQHILASTSY-------------N 195 (719)
Q Consensus 142 gs~-------dg~I~iwdl~~~~~----~~~~-~~l~~-~~~~h~~~I~~l~~sp~g~~~l~s~s~-------------d 195 (719)
-+. ...|..|++..... ...+ ..+.. ....| ....|.|.++| .++++.+. .
T Consensus 87 ~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h--~~~~l~~~pdG-~Lyv~~Gd~~~~~~~q~~~~~~ 163 (353)
T 2g8s_A 87 YSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNH--FGGRLVFDGKG-YLFIALGENNQRPTAQDLDKLQ 163 (353)
T ss_dssp EEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSC--CCCCEEECSSS-EEEEEECCTTCGGGGGCTTSCT
T ss_pred EeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcc--cCccEEECCCC-cEEEEECCCCCCCccCCCCCCC
Confidence 332 23566666653311 1111 00111 01122 23579999997 45555433 2
Q ss_pred CcEEEEECCCCc------------eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCC----------
Q 046451 196 GTTVVWDLKKQK------------PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNT---------- 253 (719)
Q Consensus 196 g~I~iwd~~~~~------------~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~---------- 253 (719)
|.|.-+|....- ....+. ..-.....++|+++...++++-...+. .=.|.-+..+
T Consensus 164 g~I~ri~~dG~~p~~npf~~~~~~~~~i~a-~G~rnp~gl~~d~~~g~l~~~d~g~~~--~dei~~i~~G~nyGwp~~~~ 240 (353)
T 2g8s_A 164 GKLVRLTDQGEIPDDNPFIKESGVRAEIWS-YGIRNPQGMAMNPWSNALWLNEHGPRG--GDEINIPQKGKNYGWPLATW 240 (353)
T ss_dssp TEEEEEETTSCCCTTCTTTTSTTSCTTEEE-ECCSEEEEEEEETTTTEEEEEEECSBS--CEEEECCCTTCBCCTTTBCS
T ss_pred eEEEEECCCCCCCCCCCCcCCCCCCccEEE-EcCcCccceEEECCCCCEEEEecCCCC--CcEEeEeccCCcCCCCCccC
Confidence 467777765320 111122 112346789999943345554433210 1122111110
Q ss_pred --------------------CCceEEeeCCCCCeeEEEeCCC------CCCeEEEEeCCCcEEEEECCCCeEEEE---ec
Q 046451 254 --------------------MSPVKEFVGHTKGVIAMSWCPN------DSSYLLTCAKDNRTICWDTVSGEIVSE---LP 304 (719)
Q Consensus 254 --------------------~~~~~~~~~h~~~V~~v~~sp~------d~~~l~sgs~Dg~I~iwd~~~~~~~~~---l~ 304 (719)
..++..+. +......+.|... ++.++++.-..+.|...++..++.+.. +.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~ 319 (353)
T 2g8s_A 241 GINYSGFKIPEAKGEIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILT 319 (353)
T ss_dssp SBCTTSSCCTTCCBSSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESG
T ss_pred CCCCCCCccCcccCCCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEccc
Confidence 01122222 2235667777641 356666666778888888876654332 22
Q ss_pred CCCCCeEEeEEcCCCCCEEEEEe-CCCcEEEEeC
Q 046451 305 AGTNWNFDIHWYPKIPGVISASS-FDGKIGIYNI 337 (719)
Q Consensus 305 ~h~~~v~~l~~spdg~~~las~s-~Dg~I~iwd~ 337 (719)
.....+.+|++.+|| .++++.. .+| +||.+
T Consensus 320 ~~~~rp~~v~~~pdG-~lyv~td~~~g--~I~ri 350 (353)
T 2g8s_A 320 DRGQRIRDVRTGPDG-YLYVLTDESSG--ELLKV 350 (353)
T ss_dssp GGCCCEEEEEECTTS-CEEEEECSTTE--EEEEE
T ss_pred CCCCceeEEEECCCC-cEEEEEeCCCC--EEEEE
Confidence 223468999999999 5555433 344 44444
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.21 E-value=0.018 Score=58.60 Aligned_cols=231 Identities=11% Similarity=-0.051 Sum_probs=114.8
Q ss_pred ceEEEEcC--CCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC----CcEEEEcCCCCCC
Q 046451 85 GLVAGGLV--DGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD----GEICIWDLSAPAE 158 (719)
Q Consensus 85 ~~lasgs~--dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d----g~I~iwdl~~~~~ 158 (719)
.+++.|+. ...+.+||..+..- ..+..+.........+.+ ++.+++.|+.+ ..+.+||+.+.+-
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W-------~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~d~~~~~W 82 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSW-------TDIRCPFEKRRDAACVFW---DNVVYILGGSQLFPIKRMDCYNVVKDSW 82 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEE-------EECCCCSCCCBSCEEEEE---TTEEEEECCBSSSBCCEEEEEETTTTEE
T ss_pred eEEEEeCCCCCceEEEecCCCCCE-------ecCCCCCcccceeEEEEE---CCEEEEEeCCCCCCcceEEEEeCCCCeE
Confidence 45666654 35788888743111 111111111111122222 55677777755 6788999887642
Q ss_pred CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC------CcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcE
Q 046451 159 PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN------GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQ 232 (719)
Q Consensus 159 ~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d------g~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~ 232 (719)
. .+..+... ......+.+ ++ .+++.|+.+ ..+.+||..+.+-...-.......-.+++.. ++ .+
T Consensus 83 ~-~~~~~p~~----r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~i 152 (306)
T 3ii7_A 83 Y-SKLGPPTP----RDSLAACAA--EG-KIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA-NG-LI 152 (306)
T ss_dssp E-EEECCSSC----CBSCEEEEE--TT-EEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TT-EE
T ss_pred E-ECCCCCcc----ccceeEEEE--CC-EEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE-CC-EE
Confidence 2 21112111 112222333 33 577777655 4689999988754332111111111222222 33 56
Q ss_pred EEEEeCCCC------CCcEEEEecCCCCCceEEeeC---CCCCeeEEEeCCCCCCeEEEEeCC-----CcEEEEECCCCe
Q 046451 233 LVVASDEDS------SPALRLWDMRNTMSPVKEFVG---HTKGVIAMSWCPNDSSYLLTCAKD-----NRTICWDTVSGE 298 (719)
Q Consensus 233 l~~~s~d~~------~~~I~lwDl~~~~~~~~~~~~---h~~~V~~v~~sp~d~~~l~sgs~D-----g~I~iwd~~~~~ 298 (719)
++.|+.++. ...+.+||+.+.. -..+.. .......+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 153 yv~GG~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 153 YVCGGSLGNNVSGRVLNSCEVYDPATET--WTELCPMIEARKNHGLVFV---KDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp EEECCEESCTTTCEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE---TTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred EEECCCCCCCCcccccceEEEeCCCCCe--EEECCCccchhhcceEEEE---CCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 776664332 2368999987642 122211 1111122222 45677777654 468899998765
Q ss_pred EEEE--ecCCCCCeEEeEEcCCCCCEEEEEeCC-----CcEEEEeCCCCccc
Q 046451 299 IVSE--LPAGTNWNFDIHWYPKIPGVISASSFD-----GKIGIYNIEGCSRY 343 (719)
Q Consensus 299 ~~~~--l~~h~~~v~~l~~spdg~~~las~s~D-----g~I~iwd~~~~~~~ 343 (719)
-... +.........+.+ ++ .+++.|+.+ ..+.+||+++.+..
T Consensus 228 W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 276 (306)
T 3ii7_A 228 WKMVSPMPWKGVTVKCAAV--GS-IVYVLAGFQGVGRLGHILEYNTETDKWV 276 (306)
T ss_dssp EEECCCCSCCBSCCEEEEE--TT-EEEEEECBCSSSBCCEEEEEETTTTEEE
T ss_pred EEECCCCCCCccceeEEEE--CC-EEEEEeCcCCCeeeeeEEEEcCCCCeEE
Confidence 3322 2211112222333 44 678888754 46788888776543
No 319
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.16 E-value=0.15 Score=61.76 Aligned_cols=252 Identities=12% Similarity=0.044 Sum_probs=135.5
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC---CCCEEE
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF---TPNLLA 140 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~---~~~~la 140 (719)
...-.++++..+ ++|+.|+..|.=.+|.+..... .++.-...+..+. .-++|.+++.... +...|+
T Consensus 326 ~~~~ssl~~l~~---------g~lFvgS~~Gds~l~~~~~~~~-~~~~~~~~~~~~~-N~~PI~D~~v~d~~~~~~~~i~ 394 (1158)
T 3ei3_A 326 TSIAECLTYLDN---------GVVFVGSRLGDSQLVKLNVDSN-EQGSYVVAMETFT-NLGPIVDMCVVDLERQGQGQLV 394 (1158)
T ss_dssp CSCCSEEEECST---------TEEEEECSSSCEEEEEECSSCC-TTSCCEEEEEEEC-CCCSEEEEEEECTTSSSCCEEE
T ss_pred ccCccEEEEECC---------CEEEEEEecCCcEEEEEecCCC-CccceEEeEeeec-CcCCceeEEEEccCCCCCCeEE
Confidence 334468888877 4899999999888888854321 1110001222333 4578888887532 123555
Q ss_pred EEe---CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCC--CCcEEEEEeCCCcEEEEECCCCceeEEecC-
Q 046451 141 SGA---DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSK--VQHILASTSYNGTTVVWDLKKQKPVISFSE- 214 (719)
Q Consensus 141 sgs---~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~--g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~- 214 (719)
+++ .+|.++++.-.-+ ......+. .. .-..++.+....+ ...+|+.+..+.+ .|+.+.. +.+.....
T Consensus 395 ~~sG~g~~gsL~~lr~Gi~--~~~~~~~~--l~-gv~~iWtl~~~~~~~~~~yLvlS~~~~T-~Vl~i~~-e~veev~~~ 467 (1158)
T 3ei3_A 395 TCSGAFKEGSLRIIRNGIG--IHEHASID--LP-GIKGLWPLRSDPNRETDDTLVLSFVGQT-RVLMLNG-EEVEETELM 467 (1158)
T ss_dssp EEECCGGGCEEEEEEESBC--EEEEEEEC--CC-SCCEEEEECCCSSCSSCCEEEEEETTEE-EEEEEET-TEEEEECCT
T ss_pred EEECcCCCCeEEEEecCCC--EEEEEeec--CC-CccEEEEEeecCCCCCCCEEEEECCCCe-EEEEEeC-Ccccccccc
Confidence 443 4678887642211 11110011 11 1235666654311 1246666666655 5555532 22222221
Q ss_pred CCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCC-CCCeeEEEeCCCCCCeEEEEeCCCcEEEEE
Q 046451 215 SIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGH-TKGVIAMSWCPNDSSYLLTCAKDNRTICWD 293 (719)
Q Consensus 215 ~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h-~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd 293 (719)
+.......+....-+...++=....+ |++++.... ..+..+... ...|...+.+. ..++.++ ++.+.+++
T Consensus 468 gf~~~~~TL~~~~l~~~~ivQVt~~~----Irli~~~~~-~~~~~w~~p~~~~I~~As~n~---~~vvva~-g~~l~~fe 538 (1158)
T 3ei3_A 468 GFVDDQQTFFCGNVAHQQLIQITSAS----VRLVSQEPK-ALVSEWKEPQAKNISVASCNS---SQVVVAV-GRALYYLQ 538 (1158)
T ss_dssp TCCSSSCEEEEEEETTTEEEEEESSC----EEEEESSSC-CEEEEECCTTCCCCCEEEECS---SEEEEEE-TTEEEEEE
T ss_pred cccCCCCcEEEEEcCCCeEEEEecCE----EEEEECCCC-eEEEEEECCCCCEEEEEEeCC---CEEEEEE-CCEEEEEE
Confidence 11111122222211223555555554 888887543 334455432 34577776653 4566664 67888888
Q ss_pred CCCCeEE--EEecCCCCCeEEeEEcCCC-----CCEEEEEeC-CCcEEEEeCCCCccc
Q 046451 294 TVSGEIV--SELPAGTNWNFDIHWYPKI-----PGVISASSF-DGKIGIYNIEGCSRY 343 (719)
Q Consensus 294 ~~~~~~~--~~l~~h~~~v~~l~~spdg-----~~~las~s~-Dg~I~iwd~~~~~~~ 343 (719)
+..++.. .... -...|.++++.+.. ..+++.|.+ |++|+|+++.+.+.+
T Consensus 539 l~~~~L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~ 595 (1158)
T 3ei3_A 539 IHPQELRQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL 595 (1158)
T ss_dssp EETTEEEEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEE
T ss_pred eeCCceeeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeE
Confidence 8766432 2222 24569999998642 268999997 999999999875543
No 320
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.13 E-value=0.64 Score=53.78 Aligned_cols=236 Identities=13% Similarity=0.056 Sum_probs=126.2
Q ss_pred CceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec-cccCCEEEEEEeCCCCCEEEEEeC
Q 046451 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS-RHKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 66 ~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
.|.++....++ +.|..|+. +-|..+|..+ + . +..+. .....|.++.... ++ .|..|+.
T Consensus 192 ~i~~i~~d~~~--------~~lWigt~-~Gl~~~~~~~------~---~-~~~~~~l~~~~i~~i~~d~-~g-~lWigT~ 250 (758)
T 3ott_A 192 FVNSLLEDTTR--------QCVWIGTE-GYLFQYFPST------G---Q-IKQTEAFHNNSIKSLALDG-NG-DLLAGTD 250 (758)
T ss_dssp CEEEEEEETTT--------TEEEEEEE-EEEEEEETTT------T---E-EEEEEEEEEEEEEEEEECT-TC-CEEEEET
T ss_pred eeEEEEEECCC--------CEEEEEEC-CCCeEEcCCC------C---e-EEeccCCCCCeEEEEEEcC-CC-CEEEEeC
Confidence 47777776654 44555554 4577788632 2 1 11111 1234577777755 44 4555665
Q ss_pred CCcEEEEcCCCCCCCCccCCcc-CCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec----CCCCCc
Q 046451 145 DGEICIWDLSAPAEPSHFPPLR-GNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS----ESIKRR 219 (719)
Q Consensus 145 dg~I~iwdl~~~~~~~~~~~l~-~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~----~~~~~~ 219 (719)
+ -|.++|..+.... .+.... ....-....|.++....+|. |..|+..| +.++.....-...... ......
T Consensus 251 ~-Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~~g~--lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (758)
T 3ott_A 251 N-GLYVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFADQEHN--IWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQ 325 (758)
T ss_dssp T-EEEEECCTTSCCE-EECCCTTCTTSCSCSCEEEEEECTTCC--EEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCB
T ss_pred C-ceeEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEEEcCCCC--EEEEeCCc-ccccccCCceeEEecccCCCCCCCce
Confidence 4 5888887664321 110000 00111234689998888763 55566666 5554332211111111 012346
Q ss_pred eeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC-CceEEee-------CCCCCeeEEEeCCCCCCeEEEEeCCCcEEE
Q 046451 220 CSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM-SPVKEFV-------GHTKGVIAMSWCPNDSSYLLTCAKDNRTIC 291 (719)
Q Consensus 220 i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~-~~~~~~~-------~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~i 291 (719)
|.++.-..+|. |.+|+.+| +..++..+.. .....+. .....|.++.-.. ++. |..|+ ++-|.+
T Consensus 326 v~~i~~D~~g~--lWiGt~~G----l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~-lWigt-~~GL~~ 396 (758)
T 3ott_A 326 FYSLFRDSKGF--YWFGGANG----LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDK-EQQ-LWIAT-DGSINR 396 (758)
T ss_dssp EEEEEECTTCC--EEEEETTE----EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECT-TSC-EEEEE-TTEEEE
T ss_pred EEEEEEcCCCC--EEEeeCCc----ceeecccccccceeEEeccCCcCCCCCCCceEEEEECC-CCC-EEEEe-CCcHhh
Confidence 88888888874 44455554 7777755421 1122221 0123578887765 554 44455 457999
Q ss_pred EECCCCeEEEEe--cC----CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCC
Q 046451 292 WDTVSGEIVSEL--PA----GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIE 338 (719)
Q Consensus 292 wd~~~~~~~~~l--~~----h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~ 338 (719)
||..+++..... .. ....|.++....++ .|..|+.++-|.++|..
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g--~lWigT~~~Gl~~~~~~ 447 (758)
T 3ott_A 397 YDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAG--QLWISTCLGGIFVVDKH 447 (758)
T ss_dssp EETTTTEEEEEEEECCC--CBSSSEEEEEECTTS--EEEEEESSSCEEEEEHH
T ss_pred cCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCC--CEEEEECCCceEEEccc
Confidence 999887654321 11 23468888887776 45556666678888754
No 321
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.12 E-value=0.12 Score=53.45 Aligned_cols=236 Identities=11% Similarity=0.069 Sum_probs=121.6
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeee----ccccCCEEEEEEeCC---CCC
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL----SRHKGPVRGLEFNSF---TPN 137 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l----~~h~~~V~~l~fsp~---~~~ 137 (719)
..-+.|+|.++| .++++--..|.|++++.. .+. ...+..+ ....+....|+|+|+ ++.
T Consensus 32 ~~P~~ia~~pdG--------~llVter~~G~I~~v~~~------~g~-~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~ 96 (347)
T 3das_A 32 NSPWGLAPLPGG--------DLLVSSRDEATITRVDAK------TGR-KTELGEVPGVSPSGEGGLLGIALSPDYASDHM 96 (347)
T ss_dssp SSEEEEEECTTS--------CEEEEETTTCEEEEECTT------TCC-EEEEEECTTCCCBTTBSEEEEEECTTHHHHCE
T ss_pred CCceEEEEcCCC--------cEEEEEecCCEEEEEECC------CCc-EeeecccCceeecCCCCceeeEeccccccCCE
Confidence 456799999998 566665558999999852 120 0112111 223457889999983 233
Q ss_pred EEEEEe--CCCcEEEEcCCCCC----C---CCcc-CCccCCCCCCCCCeEEEEecCCCCcEEEEEeC-------------
Q 046451 138 LLASGA--DDGEICIWDLSAPA----E---PSHF-PPLRGNGSAAQGEISFVSWNSKVQHILASTSY------------- 194 (719)
Q Consensus 138 ~lasgs--~dg~I~iwdl~~~~----~---~~~~-~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~------------- 194 (719)
+.++-+ .++.|.-|.+.... . ...+ ..+.. ...| ....|.|.++| .++++.+.
T Consensus 97 lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~-~~~H--~g~~l~fgpDG-~Lyvt~Gd~~~~~~~qd~~~~ 172 (347)
T 3das_A 97 VYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPK-GVIH--NGGRIAFGPDK-MLYAGTGESGDTGLSQDRKSL 172 (347)
T ss_dssp EEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECC-CSSC--CCCCEEECTTS-CEEEECBCTTCGGGTTCTTCS
T ss_pred EEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCC-CCCc--cCccccCCCCC-CEEEEECCCCCCccccCCCCC
Confidence 333322 34566666665421 1 1111 00111 1223 34579999998 46665432
Q ss_pred CCcEEEEECCCCc-------eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCC--------------
Q 046451 195 NGTTVVWDLKKQK-------PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNT-------------- 253 (719)
Q Consensus 195 dg~I~iwd~~~~~-------~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~-------------- 253 (719)
.|.|.-++....- ....+..++ .....++|+++|. ++++-...+..-.|.+. +.+
T Consensus 173 ~G~IlRi~~dG~ip~~nPf~~~~i~a~G~-RNp~Gla~dp~G~-L~~~d~g~~~~deln~i--~~G~nyGwP~~~g~~~~ 248 (347)
T 3das_A 173 GGKILRMTPDGEPAPGNPFPGSPVYSYGH-RNVQGLAWDDKQR-LFASEFGQDTWDELNAI--KPGDNYGWPEAEGKGGG 248 (347)
T ss_dssp TTCEEEECTTSSBCTTCSSTTCCEEEBCC-SBCCEEEECTTCC-EEEEECCSSSCEEEEEE--CTTCBCCTTTCCSSCCC
T ss_pred CCEEEEEeCCCCccCCCCCCCCeEEeeCC-CCcceEEECCCCC-EEEEecCCCCCceeeEE--cCCCEecCCcccCCCCC
Confidence 3555555554220 011222123 3456799999874 44443322110023332 111
Q ss_pred ---CCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeE----EEEecCCCCCeEEeEEcCCCCCEEEEE
Q 046451 254 ---MSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEI----VSELPAGTNWNFDIHWYPKIPGVISAS 326 (719)
Q Consensus 254 ---~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~----~~~l~~h~~~v~~l~~spdg~~~las~ 326 (719)
..++..+..+......++|. ++.+++..-..+.|....+..... ...+.+....+.+|...+|| .++++.
T Consensus 249 ~~~~~P~~~~~~~~~ap~G~~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG-~lyv~t 325 (347)
T 3das_A 249 SGFHDPVAQWSTDEASPSGIAYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGD-KLWLVT 325 (347)
T ss_dssp TTCCCCSEEECTTTCCEEEEEEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETT-EEEEEE
T ss_pred ccccCCcEecCCCCCCCcceEEE--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCC-cEEEEE
Confidence 11233333222355677776 355666555566776666654432 22344444678999999998 444443
No 322
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.06 E-value=0.039 Score=55.86 Aligned_cols=191 Identities=13% Similarity=0.099 Sum_probs=93.9
Q ss_pred ceEEEEcCC-----CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC-----CcEEEEcCC
Q 046451 85 GLVAGGLVD-----GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD-----GEICIWDLS 154 (719)
Q Consensus 85 ~~lasgs~d-----g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d-----g~I~iwdl~ 154 (719)
.+++.|+.+ ..+.+||+.+. +...+..+..+.........+.+ ++.+++.|+.+ ..+.+||+.
T Consensus 64 ~l~v~GG~~~~~~~~~~~~~d~~~~----~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~ 136 (301)
T 2vpj_A 64 RIYVIGGYDGRSRLSSVECLDYTAD----EDGVWYSVAPMNVRRGLAGATTL---GDMIYVSGGFDGSRRHTSMERYDPN 136 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTCC----TTCCCEEECCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCEEEEEETT
T ss_pred EEEEEcCCCCCccCceEEEEECCCC----CCCeeEECCCCCCCccceeEEEE---CCEEEEEcccCCCcccceEEEEcCC
Confidence 577777654 46888988431 10001222222211112222222 45677777654 358889987
Q ss_pred CCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC-----CcEEEEECCCCceeEEecCCC-CCceeEEEECCC
Q 046451 155 APAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN-----GTTVVWDLKKQKPVISFSESI-KRRCSVLQWNPD 228 (719)
Q Consensus 155 ~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d-----g~I~iwd~~~~~~~~~~~~~~-~~~i~~l~~sp~ 228 (719)
+.+-. .+..+.. .......+.+ ++ .+++.|+.+ ..+.+||+.+.+-...-.... ......+.+ +
T Consensus 137 ~~~W~-~~~~~p~----~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~ 206 (301)
T 2vpj_A 137 IDQWS-MLGDMQT----AREGAGLVVA--SG-VIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--N 206 (301)
T ss_dssp TTEEE-EEEECSS----CCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T
T ss_pred CCeEE-ECCCCCC----CcccceEEEE--CC-EEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--C
Confidence 65422 1111111 1112222233 33 577777654 468999998765433211111 112222233 3
Q ss_pred CCcEEEEEeCCCC--CCcEEEEecCCCCCceEEeeC---CCCCeeEEEeCCCCCCeEEEEeCC-----CcEEEEECCCCe
Q 046451 229 VATQLVVASDEDS--SPALRLWDMRNTMSPVKEFVG---HTKGVIAMSWCPNDSSYLLTCAKD-----NRTICWDTVSGE 298 (719)
Q Consensus 229 g~~~l~~~s~d~~--~~~I~lwDl~~~~~~~~~~~~---h~~~V~~v~~sp~d~~~l~sgs~D-----g~I~iwd~~~~~ 298 (719)
+ .+++.|+.++. ...+.+||+++.. -..+.. .......+.+ ++++++.|+.+ +.|.+||+.+.+
T Consensus 207 ~-~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 207 D-HIYVVGGFDGTAHLSSVEAYNIRTDS--WTTVTSMTTPRCYVGATVL---RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp T-EEEEECCBCSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE---TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred C-EEEEEeCCCCCcccceEEEEeCCCCc--EEECCCCCCcccceeEEEE---CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 3 57777776532 2369999997642 122211 1112222222 55677777765 357788887654
No 323
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.05 E-value=0.066 Score=64.44 Aligned_cols=272 Identities=12% Similarity=0.122 Sum_probs=150.5
Q ss_pred CCceEEEEEeeccCCcccceeecccCCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCce
Q 046451 37 SSANLEIFKLDFQSEDRDLLLVGESPSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLI 116 (719)
Q Consensus 37 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~ 116 (719)
....+.|.|+.......+... .- -+.-.+|.. .+||.-. ..++.|+|++. . ..+
T Consensus 46 ~~~~vvIidl~~~~~~~rrpi----~A----dsAIMnP~~--------~iiALra-g~~lQiFnl~~------k---~kl 99 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRPI----SA----DSAIMNPAS--------KVIALKA-GKTLQIFNIEM------K---SKM 99 (1630)
T ss_pred CCceEEEEECCCCCCcccccc----cc----hhhccCCCc--------ceEEEec-CCeEEEeehHH------h---hhh
Confidence 445677888875443321111 11 123345554 5666654 78899999943 2 333
Q ss_pred eeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe---
Q 046451 117 AHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS--- 193 (719)
Q Consensus 117 ~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s--- 193 (719)
+.+.- ...|.-=.|- +.+.|+-.+. ..|+-|++........+ +..+..-....|..-..+++..-++++|-
T Consensus 100 ks~~~-~e~VvfWkWi--s~~~l~lVT~-~aVyHW~~~~~s~P~k~--fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~ 173 (1630)
T 1xi4_A 100 KAHTM-TDDVTFWKWI--SLNTVALVTD-NAVYHWSMEGESQPVKM--FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 173 (1630)
T ss_pred ccccc-CCCceEEEec--CCCeeEEEcC-CeEEEeccCCCCccHHH--HhcchhcccCeeEEeeeCCCCCeEEEEeeccC
Confidence 33332 3456555564 4466655554 57999999764443332 22221112346667777777643333332
Q ss_pred ---CCCcEEEEECCCCceeEEecCCCCCceeEEEECC--CCCcEEEEEeCCCCCCcEEEEecCCC--CCc------eEEe
Q 046451 194 ---YNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNP--DVATQLVVASDEDSSPALRLWDMRNT--MSP------VKEF 260 (719)
Q Consensus 194 ---~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp--~g~~~l~~~s~d~~~~~I~lwDl~~~--~~~------~~~~ 260 (719)
-.|.+.+|.++.+.. ..+. +|......+.... ....+++.+......+.++|.++... ... +..+
T Consensus 174 ~~~v~G~mQLyS~er~~s-Q~ie-gha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~ 251 (1630)
T 1xi4_A 174 QNRVVGAMQLYSVDRKVS-QPIE-GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVF 251 (1630)
T ss_pred CCcccceeeeeecccccc-hhhh-HhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCcccccccc
Confidence 347888998875432 2222 4444443333321 11234444433222247888888543 110 0011
Q ss_pred e---CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeC
Q 046451 261 V---GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337 (719)
Q Consensus 261 ~---~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~ 337 (719)
. .-.+--.++..++ .-.+++.-+.-|.|.+||+.+|.++..-+-....|+..+-+.....++.. ...|.|.--.+
T Consensus 252 ~~~~~~~Dfpv~~~vs~-k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~v-nr~G~vl~v~v 329 (1630)
T 1xi4_A 252 FPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGV-NRKGQVLSVCV 329 (1630)
T ss_pred CCcccccCcceEEEecc-ccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEE-cCCceEEEEEE
Confidence 1 1122334667777 66788888999999999999999987766666666666655544234443 35777777777
Q ss_pred CCCcccc
Q 046451 338 EGCSRYG 344 (719)
Q Consensus 338 ~~~~~~~ 344 (719)
+...++.
T Consensus 330 ~~~~iv~ 336 (1630)
T 1xi4_A 330 EEENIIP 336 (1630)
T ss_pred ccchhhh
Confidence 6666654
No 324
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.01 E-value=0.29 Score=56.64 Aligned_cols=232 Identities=11% Similarity=0.039 Sum_probs=132.3
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeee-ccccCCEEEEEEeCCCCCEEEEE
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHL-SRHKGPVRGLEFNSFTPNLLASG 142 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l-~~h~~~V~~l~fsp~~~~~lasg 142 (719)
...|++|.-..+| +|-.|+.+| +..||-... ...... ......|.++.... ...|..|
T Consensus 21 ~n~V~~I~qD~~G---------~lWigT~~G-L~ryDG~~~---------~~~~~~~~~~~~~i~~i~~d~--~g~lWig 79 (758)
T 3ott_A 21 ASVVSCFLQDSEG---------LIWIGSNKG-LFSYDGYST---------QQHFTYGENNNTRIYCGVIID--NTYLYMG 79 (758)
T ss_dssp CCCEEEEEECTTS---------CEEEEESSC-EEEECSSCE---------EECSCTTSTTSSCEEEEEEET--TTEEEEE
T ss_pred cceEEEEEECCCC---------CEEEEECCC-ccccCCCce---------EEEEccCCCCCceEEEEEEcC--CCcEEEE
Confidence 5678888877764 677777777 566774211 000000 11234688877655 3567777
Q ss_pred eCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec----CCCCC
Q 046451 143 ADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS----ESIKR 218 (719)
Q Consensus 143 s~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~----~~~~~ 218 (719)
+.+| |..||..+...... . ......|.++.. .+| .|..++.+ -|..+|..+++.. .+. .....
T Consensus 80 T~~G-l~~yd~~~~~f~~~---~----~~~~~~i~~i~~-~~g--~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~ 146 (758)
T 3ott_A 80 TDNG-ILVYNYRADRYEQP---E----TDFPTDVRTMAL-QGD--TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNN 146 (758)
T ss_dssp ETTE-EEEEETTTTEECCC---S----CCCCSCEEEEEE-ETT--EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCS
T ss_pred eCCC-eEEEeCCCCEEECc---c----cCCCceEEEEEe-cCC--cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCC
Confidence 7665 78899876532210 0 111235777754 343 45556666 5888998765543 221 01235
Q ss_pred ceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC------CCCCeeEEEeCCCCCCeEEEEeCCCcEEEE
Q 046451 219 RCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG------HTKGVIAMSWCPNDSSYLLTCAKDNRTICW 292 (719)
Q Consensus 219 ~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~------h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iw 292 (719)
.|.++....+|. |.+++.++ |..||..+.. ...+.. ....|.++.... ++..|..|+. +-|..|
T Consensus 147 ~i~~i~~d~~g~--lWigt~~G----l~~~~~~~~~--~~~~~~~~~~~~~~~~i~~i~~d~-~~~~lWigt~-~Gl~~~ 216 (758)
T 3ott_A 147 TIYSIIRTKDNQ--IYVGTYNG----LCRYIPSNGK--FEGIPLPVHSSQSNLFVNSLLEDT-TRQCVWIGTE-GYLFQY 216 (758)
T ss_dssp CEEEEEECTTCC--EEEEETTE----EEEEETTTTE--EEEECCCCCTTCSSCCEEEEEEET-TTTEEEEEEE-EEEEEE
T ss_pred eEEEEEEcCCCC--EEEEeCCC----HhhCccCCCc--eEEecCCCccccccceeEEEEEEC-CCCEEEEEEC-CCCeEE
Confidence 688888887774 44455554 8888875431 222211 112477887765 5555555654 468889
Q ss_pred ECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 293 DTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 293 d~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
|..+++...........|.++....+| .+.+ |+. +-|.+++..+.+.
T Consensus 217 ~~~~~~~~~~~~l~~~~i~~i~~d~~g-~lWi-gT~-~Gl~~~~~~~~~~ 263 (758)
T 3ott_A 217 FPSTGQIKQTEAFHNNSIKSLALDGNG-DLLA-GTD-NGLYVYHNDTTPL 263 (758)
T ss_dssp ETTTTEEEEEEEEEEEEEEEEEECTTC-CEEE-EET-TEEEEECCTTSCC
T ss_pred cCCCCeEEeccCCCCCeEEEEEEcCCC-CEEE-EeC-CceeEEecCCCcE
Confidence 987765432211123458888888787 3443 343 4577888776543
No 325
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.99 E-value=0.056 Score=54.78 Aligned_cols=190 Identities=11% Similarity=0.148 Sum_probs=92.6
Q ss_pred ceEEEEcCC-----CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCC-----cEEEEcCC
Q 046451 85 GLVAGGLVD-----GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDG-----EICIWDLS 154 (719)
Q Consensus 85 ~~lasgs~d-----g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg-----~I~iwdl~ 154 (719)
.+++.|+.+ ..+.+||..+.. +..+..+.........+.+ ++.+++.|+.++ .+.+||+.
T Consensus 63 ~lyv~GG~~~~~~~~~~~~~d~~~~~-------W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~ 132 (302)
T 2xn4_A 63 LVFAVGGFNGSLRVRTVDSYDPVKDQ-------WTSVANMRDRRSTLGAAVL---NGLLYAVGGFDGSTGLSSVEAYNIK 132 (302)
T ss_dssp EEEEESCBCSSSBCCCEEEEETTTTE-------EEEECCCSSCCBSCEEEEE---TTEEEEEEEECSSCEEEEEEEEETT
T ss_pred EEEEEeCcCCCccccceEEECCCCCc-------eeeCCCCCccccceEEEEE---CCEEEEEcCCCCCccCceEEEEeCC
Confidence 577777654 357888874311 1222222111111122222 557777777553 57788887
Q ss_pred CCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC-------CcEEEEECCCCceeEEecCCCCCceeEEEECC
Q 046451 155 APAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN-------GTTVVWDLKKQKPVISFSESIKRRCSVLQWNP 227 (719)
Q Consensus 155 ~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d-------g~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp 227 (719)
+.+-. .+..+... ......+.+ ++ .+++.|+.+ ..+.+||+.+.+-...-.......-.+++..
T Consensus 133 ~~~W~-~~~~~p~~----r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 203 (302)
T 2xn4_A 133 SNEWF-HVAPMNTR----RSSVGVGVV--GG-LLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL- 203 (302)
T ss_dssp TTEEE-EECCCSSC----CBSCEEEEE--TT-EEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred CCeEe-ecCCCCCc----ccCceEEEE--CC-EEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE-
Confidence 65422 21112111 112222333 33 466666542 4588999987654332111111111222222
Q ss_pred CCCcEEEEEeCCCC--CCcEEEEecCCCCCceEEeeCC---CCCeeEEEeCCCCCCeEEEEeCCC-----cEEEEECCCC
Q 046451 228 DVATQLVVASDEDS--SPALRLWDMRNTMSPVKEFVGH---TKGVIAMSWCPNDSSYLLTCAKDN-----RTICWDTVSG 297 (719)
Q Consensus 228 ~g~~~l~~~s~d~~--~~~I~lwDl~~~~~~~~~~~~h---~~~V~~v~~sp~d~~~l~sgs~Dg-----~I~iwd~~~~ 297 (719)
++ .+++.|+.++. ...+.+||+.+.. -..+... ......+.+ ++.+++.|+.++ .|.+||+.+.
T Consensus 204 ~~-~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 204 NN-LLYAVGGHDGPLVRKSVEVYDPTTNA--WRQVADMNMCRRNAGVCAV---NGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp TT-EEEEECCBSSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CC-EEEEECCCCCCcccceEEEEeCCCCC--EeeCCCCCCccccCeEEEE---CCEEEEECCcCCCcccccEEEEcCCCC
Confidence 33 57777765432 2369999987542 1222111 111122222 567777777653 4888898776
Q ss_pred eE
Q 046451 298 EI 299 (719)
Q Consensus 298 ~~ 299 (719)
+-
T Consensus 278 ~W 279 (302)
T 2xn4_A 278 KW 279 (302)
T ss_dssp EE
T ss_pred eE
Confidence 53
No 326
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=96.98 E-value=0.4 Score=50.54 Aligned_cols=189 Identities=10% Similarity=-0.017 Sum_probs=89.0
Q ss_pred CCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCC-ccCCC-----CCCCCCeEEEEecCCCCcEEEEEeCCCc
Q 046451 124 GPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPP-LRGNG-----SAAQGEISFVSWNSKVQHILASTSYNGT 197 (719)
Q Consensus 124 ~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~-l~~~~-----~~h~~~I~~l~~sp~g~~~l~s~s~dg~ 197 (719)
..|.+|.+++.+.+.|..+..++.|...+- .++....+.. +.... ......+.+|.+++.....|+++...+
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g- 254 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG- 254 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-
Confidence 357889998744555555655555554432 2232222110 00000 000125889999987445666666554
Q ss_pred EEEEECCCCceeEEecCC-CC---CceeEEEECCCCCcEEEEEeCCCC--------CCcEEEEecCCCCCceEEee-CCC
Q 046451 198 TVVWDLKKQKPVISFSES-IK---RRCSVLQWNPDVATQLVVASDEDS--------SPALRLWDMRNTMSPVKEFV-GHT 264 (719)
Q Consensus 198 I~iwd~~~~~~~~~~~~~-~~---~~i~~l~~sp~g~~~l~~~s~d~~--------~~~I~lwDl~~~~~~~~~~~-~h~ 264 (719)
|+..+- .++....+... .. ..+.+|.+++.....++++..++. .+...||...+..+....+. +-.
T Consensus 255 l~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp 333 (394)
T 3b7f_A 255 IYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLP 333 (394)
T ss_dssp EEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSC
T ss_pred EEEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCC
Confidence 544442 23333332211 11 345678888643333444432110 11245565544333223222 111
Q ss_pred C-------CeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCCeEEeEEc
Q 046451 265 K-------GVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNWNFDIHWY 316 (719)
Q Consensus 265 ~-------~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~s 316 (719)
. ....+++++.+...|+.++.++.|..-+ ..|+.-..+..+-..+.+|.|.
T Consensus 334 ~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 334 TDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWASA-DEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp CSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEES-STTSBCEEEECSCSCEEEEEEE
T ss_pred CccccceEEEEEEEECCCCCCEEEEEeCCCeEEEEC-CCCCCceEcccCCCCeeEEEEe
Confidence 0 1135788874556677776666554332 2344444444444457777664
No 327
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.92 E-value=0.059 Score=54.72 Aligned_cols=191 Identities=10% Similarity=0.009 Sum_probs=93.8
Q ss_pred ceEEEEcCC----CcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCC------CcEEEEcCC
Q 046451 85 GLVAGGLVD----GSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADD------GEICIWDLS 154 (719)
Q Consensus 85 ~~lasgs~d----g~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~d------g~I~iwdl~ 154 (719)
.+++.|+.+ ..+.+||+.+.. +..+..+.........+.+ ++.+++.|+.+ ..+.+||+.
T Consensus 57 ~lyv~GG~~~~~~~~~~~~d~~~~~-------W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~ 126 (306)
T 3ii7_A 57 VVYILGGSQLFPIKRMDCYNVVKDS-------WYSKLGPPTPRDSLAACAA---EGKIYTSGGSEVGNSALYLFECYDTR 126 (306)
T ss_dssp EEEEECCBSSSBCCEEEEEETTTTE-------EEEEECCSSCCBSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETT
T ss_pred EEEEEeCCCCCCcceEEEEeCCCCe-------EEECCCCCccccceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCC
Confidence 577777654 668888874311 1222222111111122222 56777777765 468899988
Q ss_pred CCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC---------CCcEEEEECCCCceeEEecCCCCCceeEEEE
Q 046451 155 APAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY---------NGTTVVWDLKKQKPVISFSESIKRRCSVLQW 225 (719)
Q Consensus 155 ~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~---------dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~ 225 (719)
+.+-. .+..+... ......+.+ ++ .+++.|+. ...+.+||+.+.+-...-.......-.++..
T Consensus 127 ~~~W~-~~~~~p~~----r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 198 (306)
T 3ii7_A 127 TESWH-TKPSMLTQ----RCSHGMVEA--NG-LIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVF 198 (306)
T ss_dssp TTEEE-EECCCSSC----CBSCEEEEE--TT-EEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred CCceE-eCCCCcCC----cceeEEEEE--CC-EEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEE
Confidence 76422 21112211 112222332 33 46666653 3458899998875332211111111222222
Q ss_pred CCCCCcEEEEEeCCCC--CCcEEEEecCCCC-CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCC-----CcEEEEECCCC
Q 046451 226 NPDVATQLVVASDEDS--SPALRLWDMRNTM-SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKD-----NRTICWDTVSG 297 (719)
Q Consensus 226 sp~g~~~l~~~s~d~~--~~~I~lwDl~~~~-~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~D-----g~I~iwd~~~~ 297 (719)
. ++ .+++.|+.++. ...+.+||+.+.. ..+..+.........+.+ ++.+++.|+.+ +.+.+||+.+.
T Consensus 199 ~-~~-~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 199 V-KD-KIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV---GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp E-TT-EEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE---TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred E-CC-EEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE---CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 2 33 57777665431 1268999987642 111111111122223333 56788888754 56888898775
Q ss_pred e
Q 046451 298 E 298 (719)
Q Consensus 298 ~ 298 (719)
+
T Consensus 274 ~ 274 (306)
T 3ii7_A 274 K 274 (306)
T ss_dssp E
T ss_pred e
Confidence 4
No 328
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.75 E-value=0.063 Score=54.64 Aligned_cols=193 Identities=10% Similarity=0.030 Sum_probs=97.1
Q ss_pred CCCEEEEEeC----C-----CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC-----CcEEE
Q 046451 135 TPNLLASGAD----D-----GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN-----GTTVV 200 (719)
Q Consensus 135 ~~~~lasgs~----d-----g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d-----g~I~i 200 (719)
++.+++.|+. + ..+.+||+.+.+- ..+..+.. .......+.+ ++ .+++.|+.+ ..+.+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~----~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~ 141 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW-SPCAPMSV----PRNRIGVGVI--DG-HIYAVGGSHGCIHHNSVER 141 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEE-EECCCCSS----CCBTCEEEEE--TT-EEEEECCEETTEECCCEEE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeE-eECCCCCc----CccccEEEEE--CC-EEEEEcCCCCCcccccEEE
Confidence 4567777665 2 4688999877542 22211221 1112223333 33 566666543 46889
Q ss_pred EECCCCceeEEecC-CCCCceeEEEECCCCCcEEEEEeCCCC--CCcEEEEecCCCCC-ceEEeeCCCCCeeEEEeCCCC
Q 046451 201 WDLKKQKPVISFSE-SIKRRCSVLQWNPDVATQLVVASDEDS--SPALRLWDMRNTMS-PVKEFVGHTKGVIAMSWCPND 276 (719)
Q Consensus 201 wd~~~~~~~~~~~~-~~~~~i~~l~~sp~g~~~l~~~s~d~~--~~~I~lwDl~~~~~-~~~~~~~h~~~V~~v~~sp~d 276 (719)
||+.+.+-...-.. ........+.+ ++ .+++.|+.++. ...+.+||+.+..- .+..+.........+.+ +
T Consensus 142 yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~ 215 (308)
T 1zgk_A 142 YEPERDEWHLVAPMLTRRIGVGVAVL--NR-LLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL---H 215 (308)
T ss_dssp EETTTTEEEECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---T
T ss_pred ECCCCCeEeECCCCCccccceEEEEE--CC-EEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE---C
Confidence 99987653322111 11122222333 33 57777765532 23689999875321 01111111112222333 5
Q ss_pred CCeEEEEeCC-----CcEEEEECCCCeEEEE--ecCCCCCeEEeEEcCCCCCEEEEEeCC-----CcEEEEeCCCCcccc
Q 046451 277 SSYLLTCAKD-----NRTICWDTVSGEIVSE--LPAGTNWNFDIHWYPKIPGVISASSFD-----GKIGIYNIEGCSRYG 344 (719)
Q Consensus 277 ~~~l~sgs~D-----g~I~iwd~~~~~~~~~--l~~h~~~v~~l~~spdg~~~las~s~D-----g~I~iwd~~~~~~~~ 344 (719)
+.+++.|+.+ ..+.+||+.+.+-... +....... ++... ++ .+++.|+.+ ..|.+||+++.+...
T Consensus 216 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 216 NCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSAL-GITVH-QG-RIYVLGGYDGHTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TT-EEEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred CEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccce-EEEEE-CC-EEEEEcCcCCCcccceEEEEcCCCCEEee
Confidence 6777777765 5689999987654322 21111111 22222 34 577777754 357788887765443
No 329
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.74 E-value=0.031 Score=58.22 Aligned_cols=158 Identities=13% Similarity=0.093 Sum_probs=94.2
Q ss_pred eEEEEecCCCCcEEEEEe-------------CCCcEEEEECCCC--ce-eEEecC----CCCCceeEEEECC--CCCcEE
Q 046451 176 ISFVSWNSKVQHILASTS-------------YNGTTVVWDLKKQ--KP-VISFSE----SIKRRCSVLQWNP--DVATQL 233 (719)
Q Consensus 176 I~~l~~sp~g~~~l~s~s-------------~dg~I~iwd~~~~--~~-~~~~~~----~~~~~i~~l~~sp--~g~~~l 233 (719)
..++.+.++| ++++++ .+|.|.++|..+. +. ...+.. ........|.+.. ++...|
T Consensus 52 ~EDi~~~~~G--~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 52 SEDLEILPNG--LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCEEEECTTS--EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred cceeEEcCCC--eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 4566677775 444444 6899999999742 21 112221 1234667777755 454445
Q ss_pred EEEeCCCCCCcEEEEecCCCCCc---eEEeeCC-CCCeeEEEeCCCCCCeEEEEe-----------------CCCcEEEE
Q 046451 234 VVASDEDSSPALRLWDMRNTMSP---VKEFVGH-TKGVIAMSWCPNDSSYLLTCA-----------------KDNRTICW 292 (719)
Q Consensus 234 ~~~s~d~~~~~I~lwDl~~~~~~---~~~~~~h-~~~V~~v~~sp~d~~~l~sgs-----------------~Dg~I~iw 292 (719)
+++.......+|.+|++...... +.++.+. -...+++.+.+ ++.++++.. ..|.|..|
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 55544432348999888654332 2333332 23578899988 777777654 12455555
Q ss_pred ECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 293 DTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 293 d~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
|. ++.. .+...-...+.++|+||+..++++-+..++|..|++..
T Consensus 209 d~--~~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 209 SP--NDVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp CT--TCCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred EC--CeEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 55 3322 22222344789999999966667777789999999974
No 330
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=96.73 E-value=0.41 Score=50.50 Aligned_cols=201 Identities=9% Similarity=-0.023 Sum_probs=95.1
Q ss_pred CEEEEEEeCCC-CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCC------------CCCCCCeEEEEecCCCCcEEEE
Q 046451 125 PVRGLEFNSFT-PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNG------------SAAQGEISFVSWNSKVQHILAS 191 (719)
Q Consensus 125 ~V~~l~fsp~~-~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~------------~~h~~~I~~l~~sp~g~~~l~s 191 (719)
.|.+|++.+.+ .+.|..+...+.|...+- .++....+..+.... ......|.+|.+++.....|+.
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 57788888644 556666666666655532 222222221010000 0122368899998743334444
Q ss_pred EeCCCcEEEEECCCCceeEEecCCC------------CCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEE
Q 046451 192 TSYNGTTVVWDLKKQKPVISFSESI------------KRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE 259 (719)
Q Consensus 192 ~s~dg~I~iwd~~~~~~~~~~~~~~------------~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~ 259 (719)
+..++.|...+ ..++....+.... ...+.+|.++++....++++...+ |...+-. ......
T Consensus 195 g~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g----l~~s~D~--G~tW~~ 267 (394)
T 3b7f_A 195 GMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG----IYRMDRR--EGVWKR 267 (394)
T ss_dssp EEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE----EEEEETT--TTEEEC
T ss_pred EECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe----EEEeCCC--CCcceE
Confidence 54444444432 2233222222100 135889999987444566666543 5544421 121122
Q ss_pred eeC--CC---CCeeEEEeCCCCCCeEEEEeC-----------CCcEEEEECCC-CeEEEEec----CCCC----CeEEeE
Q 046451 260 FVG--HT---KGVIAMSWCPNDSSYLLTCAK-----------DNRTICWDTVS-GEIVSELP----AGTN----WNFDIH 314 (719)
Q Consensus 260 ~~~--h~---~~V~~v~~sp~d~~~l~sgs~-----------Dg~I~iwd~~~-~~~~~~l~----~h~~----~v~~l~ 314 (719)
+.. .. ..+.++.+++.+...|+++.. ++...||...+ |+....+. .... ....++
T Consensus 268 ~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~ 347 (394)
T 3b7f_A 268 IGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMT 347 (394)
T ss_dssp GGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEE
T ss_pred CCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEE
Confidence 211 11 345678887645555555542 33345665443 33322221 1111 123577
Q ss_pred EcCCCCCEEEEEeCCCcEE
Q 046451 315 WYPKIPGVISASSFDGKIG 333 (719)
Q Consensus 315 ~spdg~~~las~s~Dg~I~ 333 (719)
+++..+..|..++.++.|.
T Consensus 348 ~~p~~~~~l~~g~~~g~l~ 366 (394)
T 3b7f_A 348 ADAHAPVGVYFGTTGGEIW 366 (394)
T ss_dssp ECCSSSCCEEEECTTSCEE
T ss_pred ECCCCCCEEEEEeCCCeEE
Confidence 8775434455555455444
No 331
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.72 E-value=0.098 Score=53.20 Aligned_cols=148 Identities=7% Similarity=0.086 Sum_probs=74.9
Q ss_pred CCCEEEEEeCC-----CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC-----CcEEEEECC
Q 046451 135 TPNLLASGADD-----GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN-----GTTVVWDLK 204 (719)
Q Consensus 135 ~~~~lasgs~d-----g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d-----g~I~iwd~~ 204 (719)
++.+++.|+.+ ..+.+||+.+.+-. .+..+... ......+.+ ++ .+++.|+.+ ..+.+||+.
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~----r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~ 192 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWH-LVAPMLTR----RIGVGVAVL--NR-LLYAVGGFDGTNRLNSAECYYPE 192 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEE-ECCCCSSC----CBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETT
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEe-ECCCCCcc----ccceEEEEE--CC-EEEEEeCCCCCCcCceEEEEeCC
Confidence 45677776643 46888998765422 21112211 112223333 33 577777654 468999998
Q ss_pred CCceeEEecC-CCCCceeEEEECCCCCcEEEEEeCCCC--CCcEEEEecCCCCCceEEee---CCCCCeeEEEeCCCCCC
Q 046451 205 KQKPVISFSE-SIKRRCSVLQWNPDVATQLVVASDEDS--SPALRLWDMRNTMSPVKEFV---GHTKGVIAMSWCPNDSS 278 (719)
Q Consensus 205 ~~~~~~~~~~-~~~~~i~~l~~sp~g~~~l~~~s~d~~--~~~I~lwDl~~~~~~~~~~~---~h~~~V~~v~~sp~d~~ 278 (719)
+.+-...-.. ........+.+ ++ .+++.|+.++. ...+.+||+.+.. -..+. ........+.+ +++
T Consensus 193 ~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~---~~~ 264 (308)
T 1zgk_A 193 RNEWRMITAMNTIRSGAGVCVL--HN-CIYAAGGYDGQDQLNSVERYDVETET--WTFVAPMKHRRSALGITVH---QGR 264 (308)
T ss_dssp TTEEEECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEE---TTE
T ss_pred CCeEeeCCCCCCccccceEEEE--CC-EEEEEeCCCCCCccceEEEEeCCCCc--EEECCCCCCCccceEEEEE---CCE
Confidence 7653322111 11112222333 33 57777765432 2369999987542 11111 11111122222 567
Q ss_pred eEEEEeCC-----CcEEEEECCCCe
Q 046451 279 YLLTCAKD-----NRTICWDTVSGE 298 (719)
Q Consensus 279 ~l~sgs~D-----g~I~iwd~~~~~ 298 (719)
+++.|+.+ ..|.+||+.+.+
T Consensus 265 i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 265 IYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEEEcCcCCCcccceEEEEcCCCCE
Confidence 77777754 457788887654
No 332
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.64 E-value=0.42 Score=51.61 Aligned_cols=111 Identities=16% Similarity=0.234 Sum_probs=57.6
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc------ccCCEEEEEEeCC---C
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR------HKGPVRGLEFNSF---T 135 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~------h~~~V~~l~fsp~---~ 135 (719)
...+.|+|.++| +++++-...+.|++++.. ++ ....+..+.. ..+.+..|+|+|+ +
T Consensus 27 ~~P~~~a~~pdG--------~l~V~e~~gg~I~~~~~~------~g-~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~ 91 (454)
T 1cru_A 27 NKPHALLWGPDN--------QIWLTERATGKILRVNPE------SG-SVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNN 91 (454)
T ss_dssp SSEEEEEECTTS--------CEEEEETTTCEEEEECTT------TC-CEEEEEECTTCCCCTTSSCSEEEEEECTTTTTS
T ss_pred CCceEEEEcCCC--------cEEEEEcCCCEEEEEECC------CC-cEeEEecCCccccccCCCCceeEEEECCCcCcC
Confidence 345699999997 566655444578888752 12 0012222221 2456789999984 3
Q ss_pred CCEEEEEeC------------CCcEEEEcCCCCCC----CCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEe
Q 046451 136 PNLLASGAD------------DGEICIWDLSAPAE----PSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTS 193 (719)
Q Consensus 136 ~~~lasgs~------------dg~I~iwdl~~~~~----~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s 193 (719)
+.+.++-+. ...|.-|++..... ...+ +.............|.|.++|. ++++.+
T Consensus 92 g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i--~~~~p~~~~H~~~~l~f~pDG~-Lyv~~G 162 (454)
T 1cru_A 92 PYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDL--LAGLPSSKDHQSGRLVIGPDQK-IYYTIG 162 (454)
T ss_dssp CEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEE--EEEECCCSSCCEEEEEECTTSC-EEEEEC
T ss_pred CEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEE--EEcCCCCCCCCCCeEeECCCCe-EEEEEC
Confidence 444444332 23565565543210 1111 1111111122578999999984 555544
No 333
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.57 E-value=0.21 Score=50.85 Aligned_cols=194 Identities=11% Similarity=0.027 Sum_probs=95.9
Q ss_pred CCCEEEEEeC----C-------CcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC--------
Q 046451 135 TPNLLASGAD----D-------GEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN-------- 195 (719)
Q Consensus 135 ~~~~lasgs~----d-------g~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d-------- 195 (719)
++.+++.|+. + ..+.+||..+.+- ..+..+... ......+.+ + ..+++.|+.+
T Consensus 45 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~----r~~~~~~~~--~-~~lyv~GG~~~~~~~~~~ 116 (315)
T 4asc_A 45 ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW-LGMPPLPSP----RCLFGLGEA--L-NSIYVVGGREIKDGERCL 116 (315)
T ss_dssp TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE-EECCCBSSC----EESCEEEEE--T-TEEEEECCEESSTTCCBC
T ss_pred CCEEEEEcCcccCCCCCccccccceEEecCCCCeE-EECCCCCcc----hhceeEEEE--C-CEEEEEeCCcCCCCCccc
Confidence 6677777773 1 1277888877542 222112211 111222222 3 3566666632
Q ss_pred CcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCC-CC--CCcEEEEecCCCC-CceEEeeCCCCCeeEEE
Q 046451 196 GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDE-DS--SPALRLWDMRNTM-SPVKEFVGHTKGVIAMS 271 (719)
Q Consensus 196 g~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d-~~--~~~I~lwDl~~~~-~~~~~~~~h~~~V~~v~ 271 (719)
..+.+||..+.+-...-.......-.+++. -++ .+++.|+.+ +. ...+.+||..+.. +.+..+.........+.
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 194 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMD-LVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV 194 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETT-EEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred ceEEEECCCCCcEeECCCCCCcccceeEEE-ECC-EEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE
Confidence 468999998765322111011111122222 233 577777762 21 2368999987542 11111111111112222
Q ss_pred eCCCCCCeEEEEeCCC-----cEEEEECCCCeEEEE--ecCCCCCeEEeEEcCCCCCEEEEEeCC--------------C
Q 046451 272 WCPNDSSYLLTCAKDN-----RTICWDTVSGEIVSE--LPAGTNWNFDIHWYPKIPGVISASSFD--------------G 330 (719)
Q Consensus 272 ~sp~d~~~l~sgs~Dg-----~I~iwd~~~~~~~~~--l~~h~~~v~~l~~spdg~~~las~s~D--------------g 330 (719)
+ ++++++.|+.++ .+.+||+.+.+-... +.........+.+ ++ .+++.|+.+ .
T Consensus 195 ~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~l~v~GG~~~~~~~~~~~~~~~~~ 268 (315)
T 4asc_A 195 H---DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VG-TLYAIGGFATLETESGELVPTELN 268 (315)
T ss_dssp E---TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEEEEEEEEECTTSCEEEEEEE
T ss_pred E---CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CC-EEEEECCccccCcCCccccccccC
Confidence 2 567788887654 588999987654332 2211111222222 44 577777754 2
Q ss_pred cEEEEeCCCCcccc
Q 046451 331 KIGIYNIEGCSRYG 344 (719)
Q Consensus 331 ~I~iwd~~~~~~~~ 344 (719)
.|.+||+++.+-..
T Consensus 269 ~v~~yd~~~~~W~~ 282 (315)
T 4asc_A 269 DIWRYNEEEKKWEG 282 (315)
T ss_dssp EEEEEETTTTEEEE
T ss_pred cEEEecCCCChhhh
Confidence 47788888776544
No 334
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.43 E-value=0.044 Score=57.08 Aligned_cols=142 Identities=7% Similarity=-0.019 Sum_probs=67.1
Q ss_pred CcEEEEECCCCceeEEecCCCCCce-eEEEECCCCCcEEEEEeCCCC---CCcEEEEecCCCCCceEEeeC---CCCCee
Q 046451 196 GTTVVWDLKKQKPVISFSESIKRRC-SVLQWNPDVATQLVVASDEDS---SPALRLWDMRNTMSPVKEFVG---HTKGVI 268 (719)
Q Consensus 196 g~I~iwd~~~~~~~~~~~~~~~~~i-~~l~~sp~g~~~l~~~s~d~~---~~~I~lwDl~~~~~~~~~~~~---h~~~V~ 268 (719)
..+.+||..+.+-...-........ .+++.. ++ .+++.|+.++. ...+.+||+......-..+.. ......
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GD-KTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TT-EEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CC-EEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccccc
Confidence 5789999987654332211111112 233333 33 56777654221 125788887221111122211 111111
Q ss_pred -EEEeCCCCCCeEEEEeCC----------------------CcEEEEECCCC--eEEEEecCCCCCeEEeEEcCCCCCEE
Q 046451 269 -AMSWCPNDSSYLLTCAKD----------------------NRTICWDTVSG--EIVSELPAGTNWNFDIHWYPKIPGVI 323 (719)
Q Consensus 269 -~v~~sp~d~~~l~sgs~D----------------------g~I~iwd~~~~--~~~~~l~~h~~~v~~l~~spdg~~~l 323 (719)
+++.. ++.+++.|+.+ ..+.+||+.+. +.+..+.........+. -++ .++
T Consensus 246 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~-~i~ 320 (357)
T 2uvk_A 246 GFAGIS--NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLP--WNN-SLL 320 (357)
T ss_dssp CEEEEE--TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEE--ETT-EEE
T ss_pred ceEEEE--CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEE--eCC-EEE
Confidence 12222 56777777632 25778998764 34444443322222222 344 677
Q ss_pred EEEeCCC------cEEEEeCCCCcccc
Q 046451 324 SASSFDG------KIGIYNIEGCSRYG 344 (719)
Q Consensus 324 as~s~Dg------~I~iwd~~~~~~~~ 344 (719)
+.|+.++ .|.++++++++.+.
T Consensus 321 v~GG~~~~~~~~~~v~~l~~~~~~~~~ 347 (357)
T 2uvk_A 321 IIGGETAGGKAVTDSVLITVKDNKVTV 347 (357)
T ss_dssp EEEEECGGGCEEEEEEEEEC-CCSCEE
T ss_pred EEeeeCCCCCEeeeEEEEEEcCcEeEe
Confidence 8887653 46666888877755
No 335
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.40 E-value=0.023 Score=58.62 Aligned_cols=197 Identities=10% Similarity=0.071 Sum_probs=101.9
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccc-cCCEEEEEEe--CCCCCEEEEE-eCCCcEEEEcCCCCCCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRH-KGPVRGLEFN--SFTPNLLASG-ADDGEICIWDLSAPAEPS 160 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h-~~~V~~l~fs--p~~~~~lasg-s~dg~I~iwdl~~~~~~~ 160 (719)
++++.++.||.|.-+|. .++ +.+.++... ...+....-. ..++..++.. +.||.|+.+|..++....
T Consensus 11 ~~V~v~t~dG~l~Ald~------~tG---~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 11 DILIAADVEGGLHAVDR------RNG---HIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL 81 (339)
T ss_dssp EEEEEEETTSCEEEEET------TTT---EEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE
T ss_pred CEEEEEeCCCeEEEEEC------CCC---cEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe
Confidence 68999999999999998 556 666666543 1222221100 1122333333 589999999987764322
Q ss_pred ccCCccCCCCCCCCCeEE---EEe------cCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCc------eeEEEE
Q 046451 161 HFPPLRGNGSAAQGEISF---VSW------NSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRR------CSVLQW 225 (719)
Q Consensus 161 ~~~~l~~~~~~h~~~I~~---l~~------sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~------i~~l~~ 225 (719)
.+. ... . .....+.. ..+ +.+ ..+++++.+|++...|+++|+.+.++....... ..|...
T Consensus 82 ~~~-~~~-l-v~~SP~~~~~~pvv~~~~~~~~~--g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~ 156 (339)
T 2be1_A 82 PLS-IRQ-L-VSTSPLHLKTNIVVNDSGKIVED--EKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPE 156 (339)
T ss_dssp EEE-HHH-H-HTTCSEEEECC----------CC--EEEEECEEEEEEEEEETTTCCEEEEESTTCBCC------------
T ss_pred eec-ccc-c-eeccccccCCCceeecccccccC--CEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccc
Confidence 110 000 0 00111111 000 122 478899999999999999999999987432111 111111
Q ss_pred C---C-CCCcEEEEEeCCCCCCcEEEEecCCCCCceEE---eeCCCCC--e-eEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 226 N---P-DVATQLVVASDEDSSPALRLWDMRNTMSPVKE---FVGHTKG--V-IAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 226 s---p-~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~---~~~h~~~--V-~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
. . +....++.+..+. .+.+.+ +++..-... ...+... + .+-.++. |+.+ +.++.||.|..+|..
T Consensus 157 ~d~~~d~~~~~v~ig~~~y---~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~-Dg~~-~~~~~dg~v~A~d~~ 230 (339)
T 2be1_A 157 EKIKLQECENMIVIGKTIF---ELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSK-DGMC-IAPFRDKSLLASDLD 230 (339)
T ss_dssp --------CCEEEEEEEEE---ECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCS-SSCC-EEEETTTEEEEECST
T ss_pred cccccccCCCeEEEecceE---EEEEEC-CCCCeEEEeccccccccccccccccccccc-CCcE-EEECCCCEEEEEECC
Confidence 1 0 1123566666554 566655 332110011 1111000 0 0001122 4555 457899999999999
Q ss_pred CCeEEE
Q 046451 296 SGEIVS 301 (719)
Q Consensus 296 ~~~~~~ 301 (719)
+|+.+.
T Consensus 231 ~G~~~W 236 (339)
T 2be1_A 231 FRIARW 236 (339)
T ss_dssp TCCEEE
T ss_pred CCcEEE
Confidence 998876
No 336
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.37 E-value=0.28 Score=59.20 Aligned_cols=199 Identities=13% Similarity=0.209 Sum_probs=122.7
Q ss_pred EEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC-ce
Q 046451 130 EFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ-KP 208 (719)
Q Consensus 130 ~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~-~~ 208 (719)
-.+| ..+.||.-. ..++.|||+++......+. ....|..=.|-... .|+..+ +..|+.|++... .+
T Consensus 72 IMnP-~~~iiALra-g~~lQiFnl~~k~klks~~--------~~e~VvfWkWis~~--~l~lVT-~~aVyHW~~~~~s~P 138 (1630)
T 1xi4_A 72 IMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHT--------MTDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQP 138 (1630)
T ss_pred ccCC-CcceEEEec-CCeEEEeehHHhhhhcccc--------cCCCceEEEecCCC--eeEEEc-CCeEEEeccCCCCcc
Confidence 3456 455555544 6789999999877655431 23356677776653 444444 346999999743 34
Q ss_pred eEEecC---CCCCceeEEEECCCCCcEEEEEeCCC---CCCcEEEEecCCCCCceEEeeCCCCCeeEEEeC--CCCCCeE
Q 046451 209 VISFSE---SIKRRCSVLQWNPDVATQLVVASDED---SSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWC--PNDSSYL 280 (719)
Q Consensus 209 ~~~~~~---~~~~~i~~l~~sp~g~~~l~~~s~d~---~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~s--p~d~~~l 280 (719)
...|.. -....|..-..+++.+.++++|-..+ -.|.+.+|..+.. .-..+.||......+... +....++
T Consensus 139 ~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~--~sQ~iegha~~F~~~~~~~~~~~~~l~ 216 (1630)
T 1xi4_A 139 VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIEGHAASFAQFKMEGNAEESTLF 216 (1630)
T ss_pred HHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc--cchhhhHhHhhhheeccCCCCCCceEE
Confidence 333331 12567777888999877776665422 2468999998753 345667776655544443 2112233
Q ss_pred EEEeC---CCcEEEEECCCC---eEE------EEe-c--CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 046451 281 LTCAK---DNRTICWDTVSG---EIV------SEL-P--AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYG 344 (719)
Q Consensus 281 ~sgs~---Dg~I~iwd~~~~---~~~------~~l-~--~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~ 344 (719)
+.+.. .++++|.++... ... ..+ . .-.+.-.++..++.. .++...+.-|.|++||++++.++-
T Consensus 217 ~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~-g~iy~itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 217 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred EEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecccc-CEEEEEecCceEEEEecccchhhh
Confidence 33322 278999988542 110 000 0 123345567777776 688888889999999999998865
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.24 E-value=0.29 Score=49.85 Aligned_cols=192 Identities=10% Similarity=0.039 Sum_probs=92.6
Q ss_pred CCCEEEEEeC----CC-------cEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC-------C
Q 046451 135 TPNLLASGAD----DG-------EICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN-------G 196 (719)
Q Consensus 135 ~~~~lasgs~----dg-------~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d-------g 196 (719)
++.+++.|+. ++ .+.+||..+.+- ..+..+... ......+.+ ++ .+++.|+.+ .
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~----r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~ 127 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEW-VGLPPLPSA----RCLFGLGEV--DD-KIYVVAGKDLQTEASLD 127 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEE-EECSCBSSC----BCSCEEEEE--TT-EEEEEEEEBTTTCCEEE
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcE-EECCCCCcc----ccccceEEE--CC-EEEEEcCccCCCCcccc
Confidence 6678888873 12 177888876542 222112211 112222333 33 577777654 3
Q ss_pred cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCC---CCCcEEEEecCCCCCceEEeeC---CCCCeeEE
Q 046451 197 TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED---SSPALRLWDMRNTMSPVKEFVG---HTKGVIAM 270 (719)
Q Consensus 197 ~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~---~~~~I~lwDl~~~~~~~~~~~~---h~~~V~~v 270 (719)
.+.+||..+.+-...-.......-.+++. -++ .+++.|+.+. ....+.+||+.+.. -..+.. .......+
T Consensus 128 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~ 203 (318)
T 2woz_A 128 SVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNG-MIYCLGGKTDDKKCTNRVFIYNPKKGD--WKDLAPMKTPRSMFGVA 203 (318)
T ss_dssp EEEEEETTTTEEEEECCCSSCEESCEEEE-ETT-EEEEECCEESSSCBCCCEEEEETTTTE--EEEECCCSSCCBSCEEE
T ss_pred eEEEEeCCCCCEeECCCCCCcccccEEEE-ECC-EEEEEcCCCCCCCccceEEEEcCCCCE--EEECCCCCCCcccceEE
Confidence 58889988765433211111111112222 233 5666666421 12369999987642 122211 11111222
Q ss_pred EeCCCCCCeEEEEeCC-----CcEEEEECCCCeEEE--EecCCCCCeEEeEEcCCCCCEEEEEeCC--------------
Q 046451 271 SWCPNDSSYLLTCAKD-----NRTICWDTVSGEIVS--ELPAGTNWNFDIHWYPKIPGVISASSFD-------------- 329 (719)
Q Consensus 271 ~~sp~d~~~l~sgs~D-----g~I~iwd~~~~~~~~--~l~~h~~~v~~l~~spdg~~~las~s~D-------------- 329 (719)
.+ ++++++.|+.+ ..+.+||+.+.+-.. .+.........+.+ ++ .+++.|+.+
T Consensus 204 ~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~~~~~ 277 (318)
T 2woz_A 204 IH---KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--AG-SLYAIGGFAMIQLESKEFAPTEV 277 (318)
T ss_dssp EE---TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--TT-EEEEECCBCCBC----CCBCCBC
T ss_pred EE---CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--CC-EEEEECCeeccCCCCceecccee
Confidence 22 56777777754 357789987765322 22221111122222 34 577777654
Q ss_pred CcEEEEeCCCCcccc
Q 046451 330 GKIGIYNIEGCSRYG 344 (719)
Q Consensus 330 g~I~iwd~~~~~~~~ 344 (719)
..|.+||+++.+...
T Consensus 278 ~~v~~yd~~~~~W~~ 292 (318)
T 2woz_A 278 NDIWKYEDDKKEWAG 292 (318)
T ss_dssp CCEEEEETTTTEEEE
T ss_pred eeEEEEeCCCCEehh
Confidence 357777877765543
No 338
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.19 E-value=0.16 Score=52.80 Aligned_cols=57 Identities=9% Similarity=0.149 Sum_probs=28.7
Q ss_pred cEEEEecCCCC-CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCC------cEEEEECCCCeEEEEe
Q 046451 244 ALRLWDMRNTM-SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDN------RTICWDTVSGEIVSEL 303 (719)
Q Consensus 244 ~I~lwDl~~~~-~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg------~I~iwd~~~~~~~~~l 303 (719)
.+.+||+.+.. ..+..+........++.+ ++++++.|+.++ .|.++++++++.+...
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPW---NNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEE---TTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEe---CCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 47889987542 122222222222223332 567888888653 3556688777665543
No 339
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.09 E-value=0.37 Score=50.74 Aligned_cols=133 Identities=11% Similarity=0.077 Sum_probs=85.6
Q ss_pred CCcEEEEECCCCceeEEecCC---CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC---C--------ceEEe
Q 046451 195 NGTTVVWDLKKQKPVISFSES---IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM---S--------PVKEF 260 (719)
Q Consensus 195 dg~I~iwd~~~~~~~~~~~~~---~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~---~--------~~~~~ 260 (719)
++.||..++.....-+.+... ....|..+..+++|. +|+..+.. .|.|..+-... . ..+.+
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~-lLAl~g~~----~V~Vv~LP~~~~~~~~~~~~~~~q~~ty 114 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGD-LLCLFNDN----EIFVMEVPWGYSNVEDVSIQDAFQIFHY 114 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSS-EEEEECSS----EEEEEECCTTCSCCCCHHHHHTTEEEEE
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCC-EEEEecCC----eEEEEEecCccccCcccccccccceeEE
Confidence 467888888754444444422 133678899999994 66666665 59998886321 1 01222
Q ss_pred eC------CCCCeeEEEeCCC--CCCeEEEEeCCCcEEEEECCCCe--EE--------EEecCCCCCeEEeEEcCCCCCE
Q 046451 261 VG------HTKGVIAMSWCPN--DSSYLLTCAKDNRTICWDTVSGE--IV--------SELPAGTNWNFDIHWYPKIPGV 322 (719)
Q Consensus 261 ~~------h~~~V~~v~~sp~--d~~~l~sgs~Dg~I~iwd~~~~~--~~--------~~l~~h~~~v~~l~~spdg~~~ 322 (719)
.- ....|..+.|+|. .+..|++-..|+.|++||+.... .. ..+......|.+++|..++ ..
T Consensus 115 ~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~-lT 193 (452)
T 3pbp_A 115 SIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDG-LT 193 (452)
T ss_dssp EGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTS-SC
T ss_pred EcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCC-cE
Confidence 21 2467999999993 24589999999999999997521 12 1112233568899999876 55
Q ss_pred EEEEe--CCCcEE
Q 046451 323 ISASS--FDGKIG 333 (719)
Q Consensus 323 las~s--~Dg~I~ 333 (719)
|...+ .+|.|+
T Consensus 194 LYvl~~t~~GDIY 206 (452)
T 3pbp_A 194 LYCLNTTEGGDIF 206 (452)
T ss_dssp EEEEECTTSCEEE
T ss_pred EEEEecCCCCCEE
Confidence 55544 666664
No 340
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.01 E-value=0.4 Score=51.73 Aligned_cols=166 Identities=12% Similarity=0.127 Sum_probs=92.4
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce--eEEecCC-----CCCceeEEEECCC---CCcEEEEEeCC-----
Q 046451 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP--VISFSES-----IKRRCSVLQWNPD---VATQLVVASDE----- 239 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~--~~~~~~~-----~~~~i~~l~~sp~---g~~~l~~~s~d----- 239 (719)
..+.|+|.++| +++++-...+.|++++..+++. +..+... ....+..|+|+|+ +..++++.+..
T Consensus 28 ~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 28 KPHALLWGPDN-QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 56799999998 4555544335798888765543 2223211 2456779999995 44555555430
Q ss_pred CC----CCcEEEEecCCCC------CceE-EeeC-CCCCeeEEEeCCCCCCeEEEEeCC---------------------
Q 046451 240 DS----SPALRLWDMRNTM------SPVK-EFVG-HTKGVIAMSWCPNDSSYLLTCAKD--------------------- 286 (719)
Q Consensus 240 ~~----~~~I~lwDl~~~~------~~~~-~~~~-h~~~V~~v~~sp~d~~~l~sgs~D--------------------- 286 (719)
+. ...|.-|++.... +.+. .+.. .......|+|.+ |+.++++.+..
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~ 185 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQ 185 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTCCCCHH
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCccccccccccccccccc
Confidence 00 1146666654321 1111 1221 123468899999 88877765532
Q ss_pred -----------CcEEEEECCCCe-----------EEEEe-cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCccc
Q 046451 287 -----------NRTICWDTVSGE-----------IVSEL-PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRY 343 (719)
Q Consensus 287 -----------g~I~iwd~~~~~-----------~~~~l-~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~ 343 (719)
|.|.-+|.. ++ ....+ .+|.+ ...++|+++|..+++-.+.++.-.|..+..+...
T Consensus 186 ~~~aq~~~~~~G~IlRi~~d-G~ip~~Npf~~~~~~ei~a~G~RN-p~gla~dp~G~L~~~d~g~~~~dein~i~~G~nY 263 (454)
T 1cru_A 186 ELNGKDYHTYMGKVLRLNLD-GSIPKDNPSFNGVVSHIYTLGHRN-PQGLAFTPNGKLLQSEQGPNSDDEINLIVKGGNY 263 (454)
T ss_dssp HHHTTCCTTCSSEEEEECTT-SCCCTTCCEETTEECSEEEBCCSE-EEEEEECTTSCEEEEEECSSSCEEEEECCTTCBC
T ss_pred cccccCCCCCCeeEEEEeCC-CCCCCCCCCCCCCcceEEEECCCC-cceEEECCCCCEEEEecCCCCCeEEEEecCCCCC
Confidence 344444443 22 11111 24544 7899999987433334455666677777766554
Q ss_pred c
Q 046451 344 G 344 (719)
Q Consensus 344 ~ 344 (719)
+
T Consensus 264 G 264 (454)
T 1cru_A 264 G 264 (454)
T ss_dssp C
T ss_pred C
Confidence 3
No 341
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.93 E-value=2.4 Score=45.71 Aligned_cols=254 Identities=9% Similarity=0.022 Sum_probs=119.4
Q ss_pred CCEEEEEEeCCCCC-EEEEEeCCCcEEEEcCCCCCCCCccCCccCCCC-----CCCCCeEEEEecCC---CCcEEEEEeC
Q 046451 124 GPVRGLEFNSFTPN-LLASGADDGEICIWDLSAPAEPSHFPPLRGNGS-----AAQGEISFVSWNSK---VQHILASTSY 194 (719)
Q Consensus 124 ~~V~~l~fsp~~~~-~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~-----~h~~~I~~l~~sp~---g~~~l~s~s~ 194 (719)
..-+.|+|.+ ++. .|+++...|.|++++.........+..+..... .....+..|+|+|+ ...++++-+.
T Consensus 14 ~~P~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSG-DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCS-SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECC-CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 4567899999 554 566667889999997543211111111111111 12457889999986 2234444332
Q ss_pred C------------CcEEEEECCC----------CceeEEec-CCCCCceeEEEECCCCCcEEEEEeCCCC----------
Q 046451 195 N------------GTTVVWDLKK----------QKPVISFS-ESIKRRCSVLQWNPDVATQLVVASDEDS---------- 241 (719)
Q Consensus 195 d------------g~I~iwd~~~----------~~~~~~~~-~~~~~~i~~l~~sp~g~~~l~~~s~d~~---------- 241 (719)
+ ..|.-|.+.. .+.+..+. .........|+|.||| +++++.++.+.
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG-~LYv~~Gd~~~~~~~~~~~q~ 171 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDG-FLYIILGDGMITLDDMEEMDG 171 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTS-CEEEEECCTTCCHHHHHHCTT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCC-cEEEEeCCCCCCCCccccccC
Confidence 1 1444566542 12333332 1223456789999999 45665554431
Q ss_pred ----CCcEEEEecCCCC-------------------CceEEeeCCCCCeeEEEeCCCCC----C-eEEEEeCCC----cE
Q 046451 242 ----SPALRLWDMRNTM-------------------SPVKEFVGHTKGVIAMSWCPNDS----S-YLLTCAKDN----RT 289 (719)
Q Consensus 242 ----~~~I~lwDl~~~~-------------------~~~~~~~~h~~~V~~v~~sp~d~----~-~l~sgs~Dg----~I 289 (719)
.+.|.-.|..... ....--.+|. ....++|.+.++ + +++.+...| .-
T Consensus 172 ~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~R-Np~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ 250 (463)
T 2wg3_C 172 LSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLH-DPGRCAVDRHPTDININLTILCSDSNGKNRSSA 250 (463)
T ss_dssp CCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCS-SCCBEEEESSCSSTTCSEEEEEECC------CE
T ss_pred cCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCC-CcceEEECCCCCCcccceEEEecccCCCCCCCC
Confidence 2344444544310 0011122343 345789998433 3 344332112 12
Q ss_pred EEEECCCC------eEEEEecCCC-CCeEEeEEcCCC-----CCEEEEEeCCCcEEEEeCCCCcccccCCCCC--CCCCc
Q 046451 290 ICWDTVSG------EIVSELPAGT-NWNFDIHWYPKI-----PGVISASSFDGKIGIYNIEGCSRYGVGDSNF--SAAPL 355 (719)
Q Consensus 290 ~iwd~~~~------~~~~~l~~h~-~~v~~l~~spdg-----~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~--~~~~~ 355 (719)
.|..+..+ ..+..+..|. ..+..+.|.... ..-++.+...+.|....++....... +..+ .....
T Consensus 251 ei~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~g~i~~~~~~~~~~~~~-~~~~~~g~~~~ 329 (463)
T 2wg3_C 251 RILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRNGNFLTLQQSPVTKQWQ-EKPLCLGTSGS 329 (463)
T ss_dssp EEEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETTSCEEEEEC-----CCE-EEEECEEETTS
T ss_pred eEeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCCCcEEEEEeCCCCceee-EEEeecCCccc
Confidence 33333322 2344443331 457888886432 11244455557766666654432111 1111 00000
Q ss_pred cCcceecCCCceeeeeCCcEEEEccC
Q 046451 356 RAPKWYKRPAGASFGFGGKLVSFHPK 381 (719)
Q Consensus 356 ~~p~w~~~~~~~s~s~~Gklv~~~~~ 381 (719)
..-.+..++..+.++.||.|++.+.+
T Consensus 330 ~~~~~~~r~~~v~~~pdG~Lyv~~~~ 355 (463)
T 2wg3_C 330 CRGYFSGHILGFGEDELGEVYILSSS 355 (463)
T ss_dssp SCSCCCSEEEEEEECTTCCEEEEEES
T ss_pred ccccccCcceEEEECCCCCEEEEecc
Confidence 00112345678889999998877643
No 342
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.89 E-value=1 Score=45.66 Aligned_cols=178 Identities=10% Similarity=0.034 Sum_probs=90.4
Q ss_pred EEeCCCCCEEEEEe----CCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC
Q 046451 130 EFNSFTPNLLASGA----DDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK 205 (719)
Q Consensus 130 ~fsp~~~~~lasgs----~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~ 205 (719)
.|++ +++.|+-.. .+..|+..++..... .. +.. + .+ ..|+++++.++.+......|++.++..
T Consensus 110 ~~s~-~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~---lt~----~--~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g 176 (302)
T 3s25_A 110 YASL-IGNYIYYLHYDTQTATSLYRIRIDGEEK-KK---IKN----H--YL--FTCNTSDRYFYYNNPKNGQLYRYDTAS 176 (302)
T ss_dssp EEEE-ETTEEEEEEESSSSCEEEEEEETTSCCC-EE---EES----S--CC--CCSEEETTEEEEECTTTCCEEEEETTT
T ss_pred EEEE-eCCEEEEEeecCCCCceEEEEECCCCCe-EE---EeC----C--Cc--eEeeEECCEEEEEeCCCceEEEEECCC
Confidence 5666 566666554 344566666654332 22 111 1 11 345566655555544467899999887
Q ss_pred CceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe-
Q 046451 206 QKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA- 284 (719)
Q Consensus 206 ~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs- 284 (719)
+.....+. . ... ..++|++..++.+...++ ..|..-++.... ...+.. ..+ ..|++ ++++|+.++
T Consensus 177 ~~~~~l~~-~---~~~-~~~~P~g~~iy~t~~~~~--~~I~~~~ldG~~--~~~Lt~--~~~--~~~~~-~g~~Iy~~~~ 242 (302)
T 3s25_A 177 QSEALFYD-C---NCY-KPVVLDDTNVYYMDVNRD--NAIVHVNINNPN--PVVLTE--ANI--EHYNV-YGSLIFYQRG 242 (302)
T ss_dssp TEEEEEEC-S---CEE-EEEEEETTEEEEEEGGGT--TEEEEECSSSCC--CEECSC--SCE--EEEEE-ETTEEEEEEC
T ss_pred CCEEEEeC-C---Ccc-ceeeecCCEEEEEEcCCC--cEEEEEECCCCC--eEEEeC--CCc--ceEEE-CCCEEEEEEC
Confidence 65443333 1 122 235688876666554443 367777776543 333332 233 33667 667776653
Q ss_pred -CCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 046451 285 -KDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEG 339 (719)
Q Consensus 285 -~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~ 339 (719)
..+.|..-++.-. ....+... .+..+.. .+..+..+-...+.|...++.+
T Consensus 243 ~~~~~i~~~~~DG~-~r~~l~~~--~~~~i~i--~~d~Iy~td~~~~~i~~~~~dG 293 (302)
T 3s25_A 243 GDNPALCVVKNDGT-GFKELAKG--EFCNINV--TSQYVYFTDFVSNKEYCTSTQN 293 (302)
T ss_dssp SSSCEEEEEETTSC-CCEEEEES--CEEEEEE--CSSEEEEEETTTCCEEEEESSS
T ss_pred CCCcEEEEEECCCC-ccEEeeCC--ccceEEE--eCCEEEEEECCCCeEEEEECCC
Confidence 2356666677432 22233221 2444433 4424555544445555445433
No 343
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.83 E-value=0.78 Score=48.27 Aligned_cols=147 Identities=12% Similarity=0.167 Sum_probs=92.3
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc-------
Q 046451 135 TPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK------- 207 (719)
Q Consensus 135 ~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~------- 207 (719)
++..|+.+- ++.||.-++......+. ++....-.-+.|..+..+++| .+|+..+ +..|.|..+..+.
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~---L~~~~~i~f~~i~qlvlSpsG-~lLAl~g-~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHS---LNFSRHLVLDDTFHVISSTSG-DLLCLFN-DNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEE---EECTTTCCCCTTCEEEECTTS-SEEEEEC-SSEEEEEECCTTCSCCCCHH
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceE---EecCcccccCceeEEEECCCC-CEEEEec-CCeEEEEEecCccccCcccc
Confidence 455555444 36788878775432222 332110112357889999998 4666654 5589998887321
Q ss_pred -----eeEEecCC-----CCCceeEEEECCCCCc--EEEEEeCCCCCCcEEEEecCCCC-CceEEe---------eCCCC
Q 046451 208 -----PVISFSES-----IKRRCSVLQWNPDVAT--QLVVASDEDSSPALRLWDMRNTM-SPVKEF---------VGHTK 265 (719)
Q Consensus 208 -----~~~~~~~~-----~~~~i~~l~~sp~g~~--~l~~~s~d~~~~~I~lwDl~~~~-~~~~~~---------~~h~~ 265 (719)
..+.+..+ ....|..+.|||-+.. .|++-..|+ .|++||+.... ++. .+ .....
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~---~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ 180 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDD---TITMFDILNSQEKPI-VLNKPNNSFGLDARVN 180 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTS---CEEEEETTCTTSCCE-EESCCCSEEESCSSCC
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCC---EEEEEEcccCCCCCc-chhccccccCCCcccc
Confidence 11122211 2567999999997643 677778887 89999998632 222 22 22336
Q ss_pred CeeEEEeCCCCCCeEEEEe--CCCcEEEE
Q 046451 266 GVIAMSWCPNDSSYLLTCA--KDNRTICW 292 (719)
Q Consensus 266 ~V~~v~~sp~d~~~l~sgs--~Dg~I~iw 292 (719)
.|.+++|.. ++-.|+..+ ++|.|+-.
T Consensus 181 ev~S~~Fg~-~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 181 DITDLEFSK-DGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CEEEEEECT-TSSCEEEEECTTSCEEEEE
T ss_pred eEEEEEEcC-CCcEEEEEecCCCCCEEEE
Confidence 789999998 777777755 77877643
No 344
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.67 E-value=0.56 Score=47.59 Aligned_cols=216 Identities=11% Similarity=-0.003 Sum_probs=105.3
Q ss_pred EEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC-----C------CcEEEEECCCC
Q 046451 138 LLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY-----N------GTTVVWDLKKQ 206 (719)
Q Consensus 138 ~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~-----d------g~I~iwd~~~~ 206 (719)
+++.|+ ..+.+||..+.+-.. ..+.. ............++ .+++.|+. . ..+.+||..+.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~--~~~~~----p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~ 77 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC--ASLSS----QVPKNHVSLVTKEN-QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS 77 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE--EECCC----CSCSSEEEEECTTC-CEEEEEEEEECSSCSSSCEEEEEEEEETTTT
T ss_pred EEEEcC--CceEEECCCCCeEec--CCCCC----CCCccceEEEEECC-EEEEEcCcccCCCCCccccccceEEecCCCC
Confidence 344555 568899988765321 11111 01112222222343 57777773 1 12778898876
Q ss_pred ceeEEecCCCCCceeEEEECCCCCcEEEEEeCC-----CCCCcEEEEecCCCC-CceEEeeCCCCCeeEEEeCCCCCCeE
Q 046451 207 KPVISFSESIKRRCSVLQWNPDVATQLVVASDE-----DSSPALRLWDMRNTM-SPVKEFVGHTKGVIAMSWCPNDSSYL 280 (719)
Q Consensus 207 ~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d-----~~~~~I~lwDl~~~~-~~~~~~~~h~~~V~~v~~sp~d~~~l 280 (719)
+-...-.......-.+++.. ++ .+++.|+.+ .....+.+||..+.. +.+..+.........+.+ +++++
T Consensus 78 ~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iy 152 (315)
T 4asc_A 78 EWLGMPPLPSPRCLFGLGEA-LN-SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSH---MDLVY 152 (315)
T ss_dssp EEEECCCBSSCEESCEEEEE-TT-EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEE
T ss_pred eEEECCCCCcchhceeEEEE-CC-EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEE---CCEEE
Confidence 53221110111111122222 33 577777632 123368999987542 111111111111122222 56777
Q ss_pred EEEeC-C-----CcEEEEECCCCeEEEE--ecCCCCCeEEeEEcCCCCCEEEEEeCCC-----cEEEEeCCCCcccccCC
Q 046451 281 LTCAK-D-----NRTICWDTVSGEIVSE--LPAGTNWNFDIHWYPKIPGVISASSFDG-----KIGIYNIEGCSRYGVGD 347 (719)
Q Consensus 281 ~sgs~-D-----g~I~iwd~~~~~~~~~--l~~h~~~v~~l~~spdg~~~las~s~Dg-----~I~iwd~~~~~~~~~~~ 347 (719)
+.|+. + +.+.+||..+.+-... +.........+.+ ++ .+++.|+.++ .+.+||+++.+......
T Consensus 153 v~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 229 (315)
T 4asc_A 153 VIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DG-RIIVAAGVTDTGLTSSAEVYSITDNKWAPFEA 229 (315)
T ss_dssp EECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT-EEEEEEEECSSSEEEEEEEEETTTTEEEEECC
T ss_pred EEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CC-EEEEEeccCCCCccceEEEEECCCCeEEECCC
Confidence 77776 2 4689999987653322 2211111222222 44 6777777654 58889998876654321
Q ss_pred CCCCCCCccCcceecCCCceeeeeCCcEEEEccC
Q 046451 348 SNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPK 381 (719)
Q Consensus 348 ~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~ 381 (719)
.. . .+....+...++++++++..
T Consensus 230 ~p-------~----~r~~~~~~~~~~~l~v~GG~ 252 (315)
T 4asc_A 230 FP-------Q----ERSSLSLVSLVGTLYAIGGF 252 (315)
T ss_dssp CS-------S----CCBSCEEEEETTEEEEEEEE
T ss_pred CC-------C----cccceeEEEECCEEEEECCc
Confidence 11 1 11122345668888888754
No 345
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.62 E-value=0.063 Score=55.40 Aligned_cols=192 Identities=11% Similarity=0.017 Sum_probs=102.4
Q ss_pred cEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEEC--CCCCcEEEEE-eCCCCCCcEEEEecCCCCCceEEeeC-
Q 046451 187 HILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWN--PDVATQLVVA-SDEDSSPALRLWDMRNTMSPVKEFVG- 262 (719)
Q Consensus 187 ~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~s--p~g~~~l~~~-s~d~~~~~I~lwDl~~~~~~~~~~~~- 262 (719)
.++++++.||.|+-+|.++|+.+.++.......+....-. ..+...++.. ..|+ .|+.+|..++.. ...+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG---~l~a~~~~~G~~-~~~~~~~ 86 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDG---NIYYFNAHQGLQ-KLPLSIR 86 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTT---EEEEEETTTEEE-EEEEEHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCC---EEEEEECCCCcE-Eeeeccc
Confidence 3788999999999999999999999873211222211100 1111334443 4566 788888766521 111110
Q ss_pred ---CCCCeeE---EEe-----CCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCCC-------eEEeEEc---C-CCC
Q 046451 263 ---HTKGVIA---MSW-----CPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTNW-------NFDIHWY---P-KIP 320 (719)
Q Consensus 263 ---h~~~V~~---v~~-----sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~-------v~~l~~s---p-dg~ 320 (719)
....+.. ... .. .+..+++|+.+|++...|+.+|+.+.++...... ..+.... . +..
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~-~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~ 165 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIV-EDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECE 165 (339)
T ss_dssp HHHTTCSEEEECC-----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------C
T ss_pred cceeccccccCCCceeecccccc-cCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCC
Confidence 1111211 000 01 3467889999999999999999999998653210 0011111 0 111
Q ss_pred CEEEEEeCCCcEEEEeCCCCcccccCCCCCCC---CCcc---Ccceec--CCCceeeeeCCcEEEEccCCCCCcc
Q 046451 321 GVISASSFDGKIGIYNIEGCSRYGVGDSNFSA---APLR---APKWYK--RPAGASFGFGGKLVSFHPKSSAGHT 387 (719)
Q Consensus 321 ~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~---~~~~---~p~w~~--~~~~~s~s~~Gklv~~~~~~~~~~~ 387 (719)
..|+.+..+..+.+.+ .+++.-. ..+.. .... ...|.. ....+..+.||++++|+..++..+|
T Consensus 166 ~~v~ig~~~y~v~~~~-~sG~~W~---~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 166 NMIVIGKTIFELGIHS-YDGASYN---VTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp CEEEEEEEEEECEECC-TTSCCCC---CEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCEEE
T ss_pred CeEEEecceEEEEEEC-CCCCeEE---EecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcEEE
Confidence 4677777677777766 3332100 00000 0000 000100 1222456789999999998887777
No 346
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.36 E-value=1.2 Score=45.03 Aligned_cols=147 Identities=8% Similarity=-0.024 Sum_probs=79.5
Q ss_pred EEecCCCCcEEEEEeCC-------------CcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEe-CCCCCCc
Q 046451 179 VSWNSKVQHILASTSYN-------------GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVAS-DEDSSPA 244 (719)
Q Consensus 179 l~~sp~g~~~l~s~s~d-------------g~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s-~d~~~~~ 244 (719)
--++++|..+..+...+ ..|+..++...+... +. ... +..|+++++.++.+.. .++ ...
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~---~~~--~~~~s~~g~~Iy~~~~~~~~-~~~ 130 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LD---PDP--CIYASLIGNYIYYLHYDTQT-ATS 130 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EE---CSC--EEEEEEETTEEEEEEESSSS-CEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-ee---cCC--ccEEEEeCCEEEEEeecCCC-Cce
Confidence 34567775444444443 467788887665322 22 111 2256677766555541 222 125
Q ss_pred EEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeC-CCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEE
Q 046451 245 LRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAK-DNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVI 323 (719)
Q Consensus 245 I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~-Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~l 323 (719)
|+..++... ....+..+.. ..|++ +++.|+-.+. +..|.+.++..+.....+.+ ... ..++|++. .|
T Consensus 131 Iy~~~~dGs--~~~~lt~~~~----~~~~~-~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~-~i 198 (302)
T 3s25_A 131 LYRIRIDGE--EKKKIKNHYL----FTCNT-SDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NCY-KPVVLDDT-NV 198 (302)
T ss_dssp EEEEETTSC--CCEEEESSCC----CCSEE-ETTEEEEECTTTCCEEEEETTTTEEEEEECS---CEE-EEEEEETT-EE
T ss_pred EEEEECCCC--CeEEEeCCCc----eEeeE-ECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Ccc-ceeeecCC-EE
Confidence 666676532 3444544432 35666 5666665554 67888889876654433332 122 34668884 44
Q ss_pred EEEeCC--CcEEEEeCCCCcccc
Q 046451 324 SASSFD--GKIGIYNIEGCSRYG 344 (719)
Q Consensus 324 as~s~D--g~I~iwd~~~~~~~~ 344 (719)
+-...+ ..|..-++.++....
T Consensus 199 y~t~~~~~~~I~~~~ldG~~~~~ 221 (302)
T 3s25_A 199 YYMDVNRDNAIVHVNINNPNPVV 221 (302)
T ss_dssp EEEEGGGTTEEEEECSSSCCCEE
T ss_pred EEEEcCCCcEEEEEECCCCCeEE
Confidence 444433 367777777765544
No 347
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.05 E-value=0.34 Score=46.20 Aligned_cols=184 Identities=9% Similarity=0.042 Sum_probs=92.5
Q ss_pred CCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCce------e
Q 046451 136 PNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKP------V 209 (719)
Q Consensus 136 ~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~------~ 209 (719)
..+|++...| +|++=.........-+.........--..+.+++|+|+| .+.++ .+|.++-.+..+... -
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCc-cEEEE--eCCeEEEECCCCCCcccccccc
Confidence 3466667777 666554444332100000000001002367799999987 45555 778777777654222 1
Q ss_pred EEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCc--e---EEe-eCCCCCeeEEEeCCCCCCeEEEE
Q 046451 210 ISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSP--V---KEF-VGHTKGVIAMSWCPNDSSYLLTC 283 (719)
Q Consensus 210 ~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~--~---~~~-~~h~~~V~~v~~sp~d~~~l~sg 283 (719)
..+-...-.....+.|+++| .++++ .|+ .|+-++--+...- + ..+ .+--..+..|.|.| ++.+.++.
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G-~LYav--~dG---~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~ 152 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNG-YLYAV--SKD---KLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH 152 (236)
T ss_dssp EEEECSCGGGCSEEEECTTS-CEEEE--ETT---EEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE
T ss_pred cEecccccccceEEEECCCC-CEEEe--CCC---EEEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe
Confidence 12211111225789999998 34555 445 7877775332111 0 111 11224678999999 87766666
Q ss_pred eCCCcEEEEECCCCe------EEEEe-cCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeC
Q 046451 284 AKDNRTICWDTVSGE------IVSEL-PAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNI 337 (719)
Q Consensus 284 s~Dg~I~iwd~~~~~------~~~~l-~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~ 337 (719)
|+.++-+..-++. ....+ .........+.|.+++ .+.+.. ++ +||..
T Consensus 153 --dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G-~l~~v~--~g--~~Y~~ 206 (236)
T 1tl2_A 153 --GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG-TLFGVQ--GG--KFYED 206 (236)
T ss_dssp --TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS-CEEEEE--TT--EEEEE
T ss_pred --CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCC-cEEEEe--CC--eEEec
Confidence 7775433222111 01111 1222334456688888 455544 66 44444
No 348
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.94 E-value=0.27 Score=46.94 Aligned_cols=112 Identities=18% Similarity=0.132 Sum_probs=63.1
Q ss_pred cCccceEEEcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCccc-c----eeecccCCCCCceeeeecCCCCCCCC
Q 046451 7 INRSASVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRD-L----LLVGESPSSERFNRLAWGKNGSGSED 81 (719)
Q Consensus 7 ~~~V~~vafSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~-~----~~~~~~~~~~~V~~l~~sp~g~~~~~ 81 (719)
.+.+.+++|+|||.+.|+ .+| ++|..+....... + ..++..+-. ...++.|.++|
T Consensus 40 w~~~~~laf~P~G~LYaV--~~G------------~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G----- 99 (236)
T 1tl2_A 40 WSNFKFLFLSPGGELYGV--LND------------KIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNG----- 99 (236)
T ss_dssp CTTCSEEEECTTSCEEEE--ETT------------EEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTS-----
T ss_pred cccceeEEECCCccEEEE--eCC------------eEEEECCCCCCcccccccccEecccccc-cceEEEECCCC-----
Confidence 357889999999998777 556 4566553221110 0 111111111 25788999987
Q ss_pred CccceEEEEcCCCcEEEEcCCccccCCCCCCCCceee--e--ccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEc
Q 046451 82 FSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH--L--SRHKGPVRGLEFNSFTPNLLASGADDGEICIWD 152 (719)
Q Consensus 82 ~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~--l--~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwd 152 (719)
.+.++ .||.|+-++-.+ ++ ....+.. . ..-=..+..|.|.+ ++.+.++. |+.++-+.
T Consensus 100 ---~LYav--~dG~iyr~~pP~-----~~-~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg~lyr~~ 160 (236)
T 1tl2_A 100 ---YLYAV--SKDKLYKASPPQ-----SD-TDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQQFYKAL 160 (236)
T ss_dssp ---CEEEE--ETTEEEEESCCC-----ST-TCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TTEEEEEC
T ss_pred ---CEEEe--CCCEEEEeCCCc-----CC-CCceeccccEeccCCCCceEEEEECC-CceEEEEe--CCcEEecC
Confidence 44444 569998887522 11 0011111 1 11114678999999 77766666 77765433
No 349
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.52 E-value=1.2 Score=45.07 Aligned_cols=175 Identities=12% Similarity=0.030 Sum_probs=86.2
Q ss_pred cEEEEEeC----CC-------cEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCC----CCCcEEEEecC
Q 046451 187 HILASTSY----NG-------TTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED----SSPALRLWDMR 251 (719)
Q Consensus 187 ~~l~s~s~----dg-------~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~----~~~~I~lwDl~ 251 (719)
.+++.|+. ++ .+.+||..+.+-...-.......-.+++.. ++ .+++.|+.+. ....+.+||..
T Consensus 58 ~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~ 135 (318)
T 2woz_A 58 QVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV-DD-KIYVVAGKDLQTEASLDSVLCYDPV 135 (318)
T ss_dssp CEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE-TT-EEEEEEEEBTTTCCEEEEEEEEETT
T ss_pred EEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE-CC-EEEEEcCccCCCCcccceEEEEeCC
Confidence 57777773 12 177889887654322110111111222222 33 5777776541 11258888886
Q ss_pred CCCCceEEeeC---CCCCeeEEEeCCCCCCeEEEEeC------CCcEEEEECCCCeEEEE--ecCCCCCeEEeEEcCCCC
Q 046451 252 NTMSPVKEFVG---HTKGVIAMSWCPNDSSYLLTCAK------DNRTICWDTVSGEIVSE--LPAGTNWNFDIHWYPKIP 320 (719)
Q Consensus 252 ~~~~~~~~~~~---h~~~V~~v~~sp~d~~~l~sgs~------Dg~I~iwd~~~~~~~~~--l~~h~~~v~~l~~spdg~ 320 (719)
+.. -..+.. ..... +++. - ++.+++.|+. -+.+.+||+.+.+-... +....... ++... ++
T Consensus 136 ~~~--W~~~~~~p~~r~~~-~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~- 207 (318)
T 2woz_A 136 AAK--WSEVKNLPIKVYGH-NVIS-H-NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMF-GVAIH-KG- 207 (318)
T ss_dssp TTE--EEEECCCSSCEESC-EEEE-E-TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE-TT-
T ss_pred CCC--EeECCCCCCccccc-EEEE-E-CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccc-eEEEE-CC-
Confidence 532 111111 11111 2222 2 5677777764 24589999987653322 22111111 22222 44
Q ss_pred CEEEEEeCC-----CcEEEEeCCCCcccccCCCCCCCCCccCcceecCCCceeeeeCCcEEEEccCC
Q 046451 321 GVISASSFD-----GKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRPAGASFGFGGKLVSFHPKS 382 (719)
Q Consensus 321 ~~las~s~D-----g~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~s~s~~Gklv~~~~~~ 382 (719)
.+++.|+.+ ..+.+||+++.+........ . .+....+...++++++|+..+
T Consensus 208 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p-------~----~r~~~~~~~~~~~i~v~GG~~ 263 (318)
T 2woz_A 208 KIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFP-------Q----ERSSISLVSLAGSLYAIGGFA 263 (318)
T ss_dssp EEEEEEEEETTEEEEEEEEEETTTCCEEECCCCS-------S----CCBSCEEEEETTEEEEECCBC
T ss_pred EEEEEcCcCCCCccceEEEEECCCCeEEECCCCC-------C----cccceEEEEECCEEEEECCee
Confidence 577777654 35778998887655432111 1 111224556788999887543
No 350
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=94.34 E-value=3.6 Score=42.83 Aligned_cols=173 Identities=16% Similarity=0.204 Sum_probs=93.4
Q ss_pred cEEEEcCCCC--CCCCccCCccCCCCCCCCCeEEEEec-C--C---CCcEEEEEe-CCCcEEEEECCCCceeEEecC---
Q 046451 147 EICIWDLSAP--AEPSHFPPLRGNGSAAQGEISFVSWN-S--K---VQHILASTS-YNGTTVVWDLKKQKPVISFSE--- 214 (719)
Q Consensus 147 ~I~iwdl~~~--~~~~~~~~l~~~~~~h~~~I~~l~~s-p--~---g~~~l~s~s-~dg~I~iwd~~~~~~~~~~~~--- 214 (719)
+|.+||+.+. +.++.+. +........+.+..+.+. . + +..++..+. ..+-|.|+|+.+++..+.+..
T Consensus 124 kLv~~DL~t~~~~li~~y~-~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYY-FPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEE-CCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEE-CCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 4556666665 4444332 211111123467888887 2 1 123434333 467899999998876544321
Q ss_pred C--------------CCCceeEEEECCC----CCcEEEEEeCCCCCCcEEEEecC-----CC--CCceEEeeCC--CCCe
Q 046451 215 S--------------IKRRCSVLQWNPD----VATQLVVASDEDSSPALRLWDMR-----NT--MSPVKEFVGH--TKGV 267 (719)
Q Consensus 215 ~--------------~~~~i~~l~~sp~----g~~~l~~~s~d~~~~~I~lwDl~-----~~--~~~~~~~~~h--~~~V 267 (719)
. -...+..|+++++ ++.+++..-.. -++|.+. +. ...++.+... ...-
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-----~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~ 277 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-----IKVYSVNTKELKQKGGKLNPELLGNRGKYNDA 277 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-----SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-----CcEEEEEHHHhhCcchhhceEEeeecCCCCCc
Confidence 0 0246788999987 54444444333 3444432 21 1122222111 1233
Q ss_pred eEEEeCCCCCCeEEEEeCCCcEEEEECCC-C------eEEEEecCCCCCeEEeEEcCCCCCEEEEEe
Q 046451 268 IAMSWCPNDSSYLLTCAKDNRTICWDTVS-G------EIVSELPAGTNWNFDIHWYPKIPGVISASS 327 (719)
Q Consensus 268 ~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~-~------~~~~~l~~h~~~v~~l~~spdg~~~las~s 327 (719)
..+++.+.+|.++++--..+.|.+|+..+ . +.+..- ..-.++.++.+..+| .+.+..+
T Consensus 278 ~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d-~~l~~pd~~~i~~~g-~Lwv~sn 342 (381)
T 3q6k_A 278 IALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTS-SRFVFGTDISVDSKG-GLWFMSN 342 (381)
T ss_dssp EEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEEC-TTCCSEEEEEECTTS-CEEEEEC
T ss_pred ceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEEC-CCccccCeEEECCCC-eEEEEEC
Confidence 45666532677777778889999999875 1 222221 234477888888777 5555544
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.31 E-value=6.9 Score=42.03 Aligned_cols=254 Identities=10% Similarity=0.021 Sum_probs=118.8
Q ss_pred CceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeec---------cccCCEEEEEEeCC--
Q 046451 66 RFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLS---------RHKGPVRGLEFNSF-- 134 (719)
Q Consensus 66 ~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~---------~h~~~V~~l~fsp~-- 134 (719)
.-..|+|.+++. ..|+++...|.|++++...... . ..+..+. ........|+|+|+
T Consensus 15 ~P~~~a~~pdG~-------~rl~V~er~G~i~~~~~~g~~~---~---~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~ 81 (463)
T 2wg3_C 15 QPVGALHSGDGS-------QRLFILEKEGYVKILTPEGEIF---K---EPYLDIHKLVQSGIKGGDERGLLSLAFHPNYK 81 (463)
T ss_dssp SEEEEECCSSSS-------CCEEEEETTTEEEEECTTSCBC---S---SCSEECTTTBCCCCSSSCCCSEEEEEECTTHH
T ss_pred CceEEEECCCCC-------eEEEEEeCCceEEEEeCCCCee---e---eeecCCcceeccCccccCCCcceeeEeCCCCc
Confidence 346899999972 2466667889999997531100 0 1111111 12456889999983
Q ss_pred -CCCEEEEEeCC------------CcEEEEcCCCCC-------CCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeC
Q 046451 135 -TPNLLASGADD------------GEICIWDLSAPA-------EPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSY 194 (719)
Q Consensus 135 -~~~~lasgs~d------------g~I~iwdl~~~~-------~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~ 194 (719)
++.+.++-+.+ ..|.-|.+.... ....+..+......| ....|.|.++| +++++.+.
T Consensus 82 ~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H--~g~~l~fgpDG-~LYv~~Gd 158 (463)
T 2wg3_C 82 KNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKH--LGGQLLFGPDG-FLYIILGD 158 (463)
T ss_dssp HHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSS--CEEEEEECTTS-CEEEEECC
T ss_pred CCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcc--cCCcEeECCCC-cEEEEeCC
Confidence 23344433321 134446654321 111111111112223 46789999998 45555444
Q ss_pred CC-----------------cEEEEECCCC------c-------------eeEEecCCCCCceeEEEECCCCC----cEEE
Q 046451 195 NG-----------------TTVVWDLKKQ------K-------------PVISFSESIKRRCSVLQWNPDVA----TQLV 234 (719)
Q Consensus 195 dg-----------------~I~iwd~~~~------~-------------~~~~~~~~~~~~i~~l~~sp~g~----~~l~ 234 (719)
.+ .|.-.|.... . ....+..++. ....++|++... .+.+
T Consensus 159 ~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~R-Np~gla~dp~tg~~~G~l~~ 237 (463)
T 2wg3_C 159 GMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLH-DPGRCAVDRHPTDININLTI 237 (463)
T ss_dssp TTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCS-SCCBEEEESSCSSTTCSEEE
T ss_pred CCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCC-CcceEEECCCCCCcccceEE
Confidence 32 2333333321 0 0011111122 245688998721 2333
Q ss_pred EEeCC-CCC-CcEEEEecCCCC-----CceEEeeCCC-CCeeEEEeCCCCC------CeEEEEeCCCcEEEEECCCCe--
Q 046451 235 VASDE-DSS-PALRLWDMRNTM-----SPVKEFVGHT-KGVIAMSWCPNDS------SYLLTCAKDNRTICWDTVSGE-- 298 (719)
Q Consensus 235 ~~s~d-~~~-~~I~lwDl~~~~-----~~~~~~~~h~-~~V~~v~~sp~d~------~~l~sgs~Dg~I~iwd~~~~~-- 298 (719)
.+++. +.+ ..-.|..+..+. .++..+..|. ..+..+.|.. +. ..++++...+.|....+....
T Consensus 238 ~~~D~~G~~~~~~ei~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~-G~~fP~~~g~~f~~~~~g~i~~~~~~~~~~~ 316 (463)
T 2wg3_C 238 LCSDSNGKNRSSARILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYR-GCQSERLYGSYVFGDRNGNFLTLQQSPVTKQ 316 (463)
T ss_dssp EEECC------CEEEEEEC----CCSCCCCEECCC----CEEEEEECC-CSSCTTTTTCEEEEETTSCEEEEEC-----C
T ss_pred EecccCCCCCCCCeEeeeccCCCCCCCCCeEEeeCCCCccccceEEEe-CCCChhhcceEEEecCCCcEEEEEeCCCCce
Confidence 33332 210 112344432221 3455554332 4677888764 22 125556666777666664331
Q ss_pred -EEEEe-c--------CCCCCeEEeEEcCCCCCEEEEEeC-C----CcEEEEeCC
Q 046451 299 -IVSEL-P--------AGTNWNFDIHWYPKIPGVISASSF-D----GKIGIYNIE 338 (719)
Q Consensus 299 -~~~~l-~--------~h~~~v~~l~~spdg~~~las~s~-D----g~I~iwd~~ 338 (719)
....+ . .....+.++.+.+|| .++++... + ..=+||.+.
T Consensus 317 ~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG-~Lyv~~~~~~~~~~~~G~I~Ri~ 370 (463)
T 2wg3_C 317 WQEKPLCLGTSGSCRGYFSGHILGFGEDELG-EVYILSSSKSMTQTHNGKLYKIV 370 (463)
T ss_dssp CEEEEECEEETTSSCSCCCSEEEEEEECTTC-CEEEEEESSCGGGCSSEEEEEEE
T ss_pred eeEEEeecCCcccccccccCcceEEEECCCC-CEEEEeccCCcccCCCCcEEEec
Confidence 11112 1 123468999999999 55555542 1 234566664
No 352
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=94.16 E-value=6.9 Score=45.25 Aligned_cols=69 Identities=10% Similarity=0.042 Sum_probs=36.2
Q ss_pred CEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC
Q 046451 125 PVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195 (719)
Q Consensus 125 ~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d 195 (719)
.+..|++++.+.+.++.+...+.|.. ..+.++....+..+.... .....+..|.+++.....++++..+
T Consensus 122 ~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~-~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 122 NGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAF-TNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp SCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCC-STTTCEEEEEECTTSTTCEEEEESS
T ss_pred ceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCcccc-CCCCCeEEEEECCCCCCEEEEEEcC
Confidence 35678888866667777764544432 223344443322111000 1124678899988654455555554
No 353
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.12 E-value=1 Score=51.40 Aligned_cols=201 Identities=11% Similarity=0.095 Sum_probs=103.3
Q ss_pred CCCEEEEEeCC----CcEEEEcCCCCCCCCccC-Ccc-CCCCCCCCCeEEEEecCCCCcEEEEEeCC------CcEEEEE
Q 046451 135 TPNLLASGADD----GEICIWDLSAPAEPSHFP-PLR-GNGSAAQGEISFVSWNSKVQHILASTSYN------GTTVVWD 202 (719)
Q Consensus 135 ~~~~lasgs~d----g~I~iwdl~~~~~~~~~~-~l~-~~~~~h~~~I~~l~~sp~g~~~l~s~s~d------g~I~iwd 202 (719)
++.+++.|+.+ ..+.+||..+.+.. .+. .+. .........-..+.+..++ .+++.|+.+ ..+.+||
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~-~~~~~~p~~~~p~~R~~hs~~~~~~~~-~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKID-MKNIEVSSSEVPVARMCHTFTTISRNN-QLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEE-EEECCCCCSCCCCCCBSCEEEEETTTT-EEEEECCBSSTTCBCCCCEEEE
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEE-EeccCCCCCCCCccccceEEEEEccCC-EEEEEcCCCCCCCccccEEEEe
Confidence 56777777753 46888998776422 111 100 0011111223333332143 577777654 3588999
Q ss_pred CCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeC------CCCCeeEEEeCCCC
Q 046451 203 LKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVG------HTKGVIAMSWCPND 276 (719)
Q Consensus 203 ~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~------h~~~V~~v~~sp~d 276 (719)
..+.+-...-.......-.+++...++ .+++.|+.++.. .+.+||..+.. -..+.. .......+.+...+
T Consensus 475 ~~t~~W~~~~~~p~~R~~h~~~~~~~~-~iyv~GG~~~~~-~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~a~v~~~~~ 550 (695)
T 2zwa_A 475 MKTREWSMIKSLSHTRFRHSACSLPDG-NVLILGGVTEGP-AMLLYNVTEEI--FKDVTPKDEFFQNSLVSAGLEFDPVS 550 (695)
T ss_dssp TTTTEEEECCCCSBCCBSCEEEECTTS-CEEEECCBCSSC-SEEEEETTTTE--EEECCCSSGGGGSCCBSCEEEEETTT
T ss_pred CCCCcEEECCCCCCCcccceEEEEcCC-EEEEECCCCCCC-CEEEEECCCCc--eEEccCCCCCCCcccceeEEEEeCCC
Confidence 987543322111111222233332244 578888776544 79999987642 111111 11222335555423
Q ss_pred CCeEEEEeC--C-----CcEEEEECCCCe--------EEEEec-CCCCCeEEeEEcCCCCCEEEEEeCC--------CcE
Q 046451 277 SSYLLTCAK--D-----NRTICWDTVSGE--------IVSELP-AGTNWNFDIHWYPKIPGVISASSFD--------GKI 332 (719)
Q Consensus 277 ~~~l~sgs~--D-----g~I~iwd~~~~~--------~~~~l~-~h~~~v~~l~~spdg~~~las~s~D--------g~I 332 (719)
+.+++.||. + +.+.+||+.+.+ .+.... ...... ++....++ .+++.|+.+ ..|
T Consensus 551 ~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~-~iyv~GG~~~~~~~~~~~~v 628 (695)
T 2zwa_A 551 KQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPR-KLLIVGGTSPSGLFDRTNSI 628 (695)
T ss_dssp TEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETT-EEEEECCBCSSCCCCTTTSE
T ss_pred CEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCC-EEEEECCccCCCCCCCCCeE
Confidence 667777775 2 458899988766 122211 111112 22333334 577777743 468
Q ss_pred EEEeCCCCccc
Q 046451 333 GIYNIEGCSRY 343 (719)
Q Consensus 333 ~iwd~~~~~~~ 343 (719)
.+||+.+.+..
T Consensus 629 ~~yd~~t~~W~ 639 (695)
T 2zwa_A 629 ISLDPLSETLT 639 (695)
T ss_dssp EEEETTTTEEE
T ss_pred EEEECCCCeEE
Confidence 99999887765
No 354
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.82 E-value=5.8 Score=43.17 Aligned_cols=138 Identities=15% Similarity=0.070 Sum_probs=79.4
Q ss_pred CeeEEEeCCCCCCeEEEEe-CCCcEEEEECCC------Ce-------EEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCc
Q 046451 266 GVIAMSWCPNDSSYLLTCA-KDNRTICWDTVS------GE-------IVSELPAGTNWNFDIHWYPKIPGVISASSFDGK 331 (719)
Q Consensus 266 ~V~~v~~sp~d~~~l~sgs-~Dg~I~iwd~~~------~~-------~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~ 331 (719)
....+.++| ||+++++++ .+.++.++|+.. ++ .+.+.+.. -.....+|.++| +...|.--|..
T Consensus 324 sPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G-lGPlHt~Fd~~G-~aYTtlfidSq 400 (638)
T 3sbq_A 324 NPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG-LGPLHTTFDGRG-NAYTTLFIDSQ 400 (638)
T ss_dssp SCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC-SCEEEEEECSSS-EEEEEETTTTE
T ss_pred CCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC-CcccEEEECCCC-ceEeeeeecce
Confidence 335678899 888877766 678999999873 22 14444433 347889999999 67777778999
Q ss_pred EEEEeCCCCcccccCCCCCCCC-Cc---cCcceecCCCceeeeeCCcEEEEccCCCCCcccccccccccee---eccCCC
Q 046451 332 IGIYNIEGCSRYGVGDSNFSAA-PL---RAPKWYKRPAGASFGFGGKLVSFHPKSSAGHTSENSQHAPVHG---VDQSKY 404 (719)
Q Consensus 332 I~iwd~~~~~~~~~~~~~~~~~-~~---~~p~w~~~~~~~s~s~~Gklv~~~~~~~~~~~~~~~~~~~v~~---v~~s~~ 404 (719)
|.-|+++.......++..-... .+ ..|..+....+-+-..|||+++..+.-+ .+|-+..--..... +|||.|
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~s-kdrfl~vGpl~pen~QlidIsGd 479 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFS-KDRFLPVGPLHPENDQLIDISGD 479 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCC-TTSSCCCSSSCCEEEEEEECSSS
T ss_pred EEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccc-cccCcCCCCCCCCcceeEecCCC
Confidence 9999998753322233210000 00 2222333334456678898766544332 33333221111111 666666
Q ss_pred CCC
Q 046451 405 GMV 407 (719)
Q Consensus 405 ~~~ 407 (719)
-..
T Consensus 480 kM~ 482 (638)
T 3sbq_A 480 EMK 482 (638)
T ss_dssp SCE
T ss_pred ceE
Confidence 554
No 355
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=93.57 E-value=4.6 Score=46.01 Aligned_cols=251 Identities=12% Similarity=0.088 Sum_probs=122.9
Q ss_pred eEE-EcCCCCeEEEeeccceeecccCCCceEEEEEeeccCCcccceeecccCC----CCCceeeeecCCCCCCCCCccce
Q 046451 12 SVA-FAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDRDLLLVGESPS----SERFNRLAWGKNGSGSEDFSLGL 86 (719)
Q Consensus 12 ~va-fSpdg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~----~~~V~~l~~sp~g~~~~~~~~~~ 86 (719)
.+. ++||+++++++-..|- +.-..++++|+.+++....- +...... ..++..++|..++ .+
T Consensus 133 g~~~~~~~~~~~~~~ls~~G-----~d~~~~~~~d~~t~~~~~~~-~~~~~k~~~~~~~~~~~~~W~d~~--------~~ 198 (711)
T 4hvt_A 133 GVSNCFQNPNRYLISMSFGG-----KDEMFFREWDLEKKDFVKNG-FEPITNSGKLLEGKFTYPTWINKD--------TI 198 (711)
T ss_dssp EEEECSSSTTEEEEEEEETT-----CSEEEEEEEETTTTEECTTC-SCCBCTTCCBCCEETCCEEEEETT--------EE
T ss_pred ceeecCCCCCEEEEEeCCCC-----CceeEEEEEECCcCCcCCCC-cccccccccccccccceeeEECCC--------EE
Confidence 344 8999998887644432 34566789998866432211 0000000 0123445886332 34
Q ss_pred EEEE----------cCCCcEEEEcCCccccCCCCCCCCceeeeccccCCE-EEEEEeCCCCC-----EEEEEeCC---Cc
Q 046451 87 VAGG----------LVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPV-RGLEFNSFTPN-----LLASGADD---GE 147 (719)
Q Consensus 87 lasg----------s~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V-~~l~fsp~~~~-----~lasgs~d---g~ 147 (719)
+++. +....|+.|.+-+... .....+.+....+ .....+. +++ .+++.+.+ ..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~-------~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~ 270 (711)
T 4hvt_A 199 IFNLVLHKNEITSSLYPNSLYIWKRGESIE-------KAKKLFEVPKEYIYVSAGKLL-SDTISSSLIFISANKDFYNYD 270 (711)
T ss_dssp EECCCCSTTCBCTTSSBCEEEEEETTSCGG-------GCEEEEECCTTSCEEEEEESS-CTTTCSSEEEEEEESSSSCEE
T ss_pred EEEeCCCCCCcCcCCCCCEEEEEECCCChH-------HCeEEeccCCCceEEEEEEec-CCCceEEEEEEEEecccCcee
Confidence 4432 1125688888743221 1222233222222 2344445 334 34444322 45
Q ss_pred EEEEcCCCCCCC-CccCCccCCCCCCCCCeEEEEecCCCCcEEEEE----------eCCCcEEEEECCCCc-------ee
Q 046451 148 ICIWDLSAPAEP-SHFPPLRGNGSAAQGEISFVSWNSKVQHILAST----------SYNGTTVVWDLKKQK-------PV 209 (719)
Q Consensus 148 I~iwdl~~~~~~-~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~----------s~dg~I~iwd~~~~~-------~~ 209 (719)
+++.|....... .. +.. . . .. .+..+..+ .+++.. ...+.|.+.|+.+.. ..
T Consensus 271 ~~~~~~~~~~~~~~~---l~~--~--~-~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 340 (711)
T 4hvt_A 271 NYILDTKYKNLKLQK---INM--P--S-DA-TLQGSFKE-YVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSL 340 (711)
T ss_dssp EEEEECSSSSCEEEE---CCS--C--T-TC-EEEEEETT-EEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTC
T ss_pred EEEEcCCCCCCcceE---eec--C--C-cc-eEeeeECC-EEEEEECcccccccccCCCCeEEEEECCcccccccccccc
Confidence 666665532211 11 111 0 1 11 12223343 344422 246789999987631 22
Q ss_pred EE-ecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEE-eeCC-CCCeeEEEeCCCCCCeEEEEeC-
Q 046451 210 IS-FSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKE-FVGH-TKGVIAMSWCPNDSSYLLTCAK- 285 (719)
Q Consensus 210 ~~-~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~-~~~h-~~~V~~v~~sp~d~~~l~sgs~- 285 (719)
.. +.......+..+.|..+ .++++...++ ...|+++|+.++...+.. +... .+.+..+.++++++.++++.+.
T Consensus 341 ~~~~~~~~~~~l~~~~~~~~--~l~~~~~~~~-~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~ 417 (711)
T 4hvt_A 341 KILFTPTANEVFNFISTTKD--RVFLATYDNV-VAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENS 417 (711)
T ss_dssp EEEECCCTTEEEEEEEECSS--CEEEEEEETT-EEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECS
T ss_pred eEEECCCCCCeEEEEEEECC--EEEEEEEECC-EEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecC
Confidence 22 33235567788888876 4666666665 235788887654211222 2211 2456666677634455555543
Q ss_pred --CCcEEEEECCCCe
Q 046451 286 --DNRTICWDTVSGE 298 (719)
Q Consensus 286 --Dg~I~iwd~~~~~ 298 (719)
-+.+..+|+. ++
T Consensus 418 ~~P~~~~~~d~~-~~ 431 (711)
T 4hvt_A 418 IVPPTIYLWVKT-HE 431 (711)
T ss_dssp SSCCEEEEECTT-SC
T ss_pred CCCCEEEEEeCC-Cc
Confidence 3678888886 43
No 356
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=93.15 E-value=14 Score=42.73 Aligned_cols=158 Identities=6% Similarity=0.009 Sum_probs=78.1
Q ss_pred CCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeecc-------ccCCEEEEEEeCCCC
Q 046451 64 SERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSR-------HKGPVRGLEFNSFTP 136 (719)
Q Consensus 64 ~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~-------h~~~V~~l~fsp~~~ 136 (719)
...|.+|++++... ..++++...+.|...+ ..+ +....+.. ....|.+|++++.+.
T Consensus 14 ~g~i~~i~~~p~~~-------~~~~a~~~~ggv~rS~-------DgG---~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~ 76 (789)
T 1sqj_A 14 GGYITGIVAHPKTK-------DLLYARTDIGGAYRWD-------AGT---SKWIPLNDFIEAQDMNIMGTESIALDPNNP 76 (789)
T ss_dssp CSCEEEEEECSSST-------TCEEEEESSSCEEEEE-------TTT---TEEEESCTTCCGGGGGGCSEEEEEEETTEE
T ss_pred CCcEEEEEECCCCC-------CEEEEEecCCCEEEec-------CCC---CCeeECccCCCcccccCCceeEEEECCCCC
Confidence 46899999998753 5667777667665554 223 22222222 234699999988555
Q ss_pred CEEEEEeCCCc----EEEEcC-CCCCCCCccCC-ccCCC-CCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCcee
Q 046451 137 NLLASGADDGE----ICIWDL-SAPAEPSHFPP-LRGNG-SAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPV 209 (719)
Q Consensus 137 ~~lasgs~dg~----I~iwdl-~~~~~~~~~~~-l~~~~-~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~ 209 (719)
+.++.+..+.. -.||.. +.++....+.. +.... ......+..+++++.....++.+...+.|. .....++.-
T Consensus 77 ~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~-~S~DgG~TW 155 (789)
T 1sqj_A 77 DRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW-KSSDRAKTW 155 (789)
T ss_dssp EEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE-EESSTTSSC
T ss_pred CEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEE-EECCCCccc
Confidence 55555543311 233332 23332222110 00000 001113556778776445666666444332 222333333
Q ss_pred EEecC-----CCCCceeEEEECCCCCcEEEEEeCC
Q 046451 210 ISFSE-----SIKRRCSVLQWNPDVATQLVVASDE 239 (719)
Q Consensus 210 ~~~~~-----~~~~~i~~l~~sp~g~~~l~~~s~d 239 (719)
..+.. .....+..|.+++.....++++..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 156 TNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred CCCccCccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 33221 1124578899988654455555543
No 357
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.15 E-value=7.5 Score=38.62 Aligned_cols=224 Identities=12% Similarity=0.093 Sum_probs=120.2
Q ss_pred CEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC
Q 046451 125 PVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK 204 (719)
Q Consensus 125 ~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~ 204 (719)
.|..|+... .+.+.-. ||.|+.|-......... + .. ....|..|+.... +.++. . ||.|+.|-..
T Consensus 25 ~i~~ia~G~---~h~~~l~-~G~v~~wG~n~~Gqlg~-p-~~-----~~~~i~~ia~G~~--hs~~l-~-~G~v~~wG~n 89 (282)
T 3qhy_B 25 GVDAIAGGY---FHGLALK-GGKVLGWGANLNGQLTM-P-AA-----TQSGVDAIAAGNY--HSLAL-K-DGEVIAWGGN 89 (282)
T ss_dssp SCCEEEECS---SEEEEEE-TTEEEEEECCSSSTTSC-C-GG-----GGSCCCEEEECSS--EEEEE-E-TTEEEEEECC
T ss_pred CCcEEEeCC---CeEEEEE-CCEEEEEeCCCCCCCCC-C-cc-----CCCCEEEEEeCCC--EEEEE-E-CCEEEEeeCC
Confidence 567777643 3433345 99999998765443321 0 10 1225777776554 45555 5 9999999876
Q ss_pred CCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe
Q 046451 205 KQKPVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA 284 (719)
Q Consensus 205 ~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs 284 (719)
....+-.-. .....|..|+...+ ..++.. ++ .|+.|-.......-. -......|..|+... .+.+.-.
T Consensus 90 ~~Gqlg~P~-~~~~~v~~ia~G~~--hs~al~--~G---~v~~wG~n~~gqlg~-~~~~~~~i~~i~~G~---~~~~~l~ 157 (282)
T 3qhy_B 90 EDGQTTVPA-EARSGVDAIAAGAW--ASYALK--DG---KVIAWGDDSDGQTTV-PAEAQSGVTALDGGV---YTALAVK 157 (282)
T ss_dssp TTSTTCCCG-GGSSSEEEEEEETT--EEEEEE--TT---EEEEEECCTTSTTSC-CGGGGSSEEEEEECS---SEEEEEE
T ss_pred CCCCCCCCc-ccCCCeEEEECcCC--EEEEEe--CC---eEEEecCCCCCcCCC-CccCCCCeEEEEccc---CEEEEEE
Confidence 532221111 12346777777655 234443 55 799997654322111 111234677777643 3333334
Q ss_pred CCCcEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceecCC
Q 046451 285 KDNRTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYKRP 364 (719)
Q Consensus 285 ~Dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~~~ 364 (719)
||.|+.|-....-.+..-......|..|+...+. .++. .||.|..|-.............+.. +... .....
T Consensus 158 -~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h--s~al--~~G~v~~wG~n~~gqlg~p~~~~~~--v~~i-~~G~~ 229 (282)
T 3qhy_B 158 -NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFH--SLAL--KDGKVIAWGDNRYKQTTVPTEALSG--VSAI-ASGEW 229 (282)
T ss_dssp -TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEE--ETTEEEEEECCTTSTTCCCGGGGSS--CCEE-EECSS
T ss_pred -CCEEEEecCCCCCCCCCceecCCCeEEEEecCCE--EEEE--ECCeEEEEECCCCCCCCCCcccCCC--ceEE-EcCCC
Confidence 7999999765422111111112347777765543 4444 4999999987665443322111110 0000 11112
Q ss_pred CceeeeeCCcEEEEccCCCC
Q 046451 365 AGASFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 365 ~~~s~s~~Gklv~~~~~~~~ 384 (719)
..++.. +|++++|+.+...
T Consensus 230 h~~al~-~g~v~~wG~n~~g 248 (282)
T 3qhy_B 230 YSLALK-NGKVIAWGSSRTA 248 (282)
T ss_dssp CEEEEE-TTEEEEESTTCCC
T ss_pred EEEEEE-CCEEEEecCCCCc
Confidence 345667 9999999988764
No 358
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.58 E-value=8.9 Score=38.05 Aligned_cols=226 Identities=14% Similarity=0.106 Sum_probs=120.7
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeC
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGAD 144 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~ 144 (719)
..|..|+-... ..++. . ||.|+.|-.... + ++- .-......|..|+... ...++. .
T Consensus 24 ~~i~~ia~G~~---------h~~~l-~-~G~v~~wG~n~~-----G---qlg-~p~~~~~~i~~ia~G~--~hs~~l-~- 79 (282)
T 3qhy_B 24 SGVDAIAGGYF---------HGLAL-K-GGKVLGWGANLN-----G---QLT-MPAATQSGVDAIAAGN--YHSLAL-K- 79 (282)
T ss_dssp SSCCEEEECSS---------EEEEE-E-TTEEEEEECCSS-----S---TTS-CCGGGGSCCCEEEECS--SEEEEE-E-
T ss_pred CCCcEEEeCCC---------eEEEE-E-CCEEEEEeCCCC-----C---CCC-CCccCCCCEEEEEeCC--CEEEEE-E-
Confidence 36777776554 34444 4 999999986321 1 111 0111234677777643 233444 5
Q ss_pred CCcEEEEcCCCCCCCCccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEE
Q 046451 145 DGEICIWDLSAPAEPSHFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQ 224 (719)
Q Consensus 145 dg~I~iwdl~~~~~~~~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~ 224 (719)
||.|+.|-.........- .. ....|..|+.... +.++. . ||.|+.|-......+-... .....|..|+
T Consensus 80 ~G~v~~wG~n~~Gqlg~P--~~-----~~~~v~~ia~G~~--hs~al-~-~G~v~~wG~n~~gqlg~~~-~~~~~i~~i~ 147 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTVP--AE-----ARSGVDAIAAGAW--ASYAL-K-DGKVIAWGDDSDGQTTVPA-EAQSGVTALD 147 (282)
T ss_dssp TTEEEEEECCTTSTTCCC--GG-----GSSSEEEEEEETT--EEEEE-E-TTEEEEEECCTTSTTSCCG-GGGSSEEEEE
T ss_pred CCEEEEeeCCCCCCCCCC--cc-----cCCCeEEEECcCC--EEEEE-e-CCeEEEecCCCCCcCCCCc-cCCCCeEEEE
Confidence 999999987654433210 11 1236778877654 33443 4 9999999876532221111 2345577776
Q ss_pred ECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec
Q 046451 225 WNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP 304 (719)
Q Consensus 225 ~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~ 304 (719)
...+ +.++.. ++ .|+.|-.......-.. ..-...|..|+... .+.+.- .||.|+.|-....-.+..-.
T Consensus 148 ~G~~--~~~~l~--~G---~v~~wG~n~~gqlg~p-~~~~~~v~~i~~G~---~hs~al-~~G~v~~wG~n~~gqlg~p~ 215 (282)
T 3qhy_B 148 GGVY--TALAVK--NG---GVIAWGDNYFGQTTVP-AEAQSGVDDVAGGI---FHSLAL-KDGKVIAWGDNRYKQTTVPT 215 (282)
T ss_dssp ECSS--EEEEEE--TT---EEEEEECCTTSTTSCC-GGGGSSEEEEEECS---SEEEEE-ETTEEEEEECCTTSTTCCCG
T ss_pred cccC--EEEEEE--CC---EEEEecCCCCCCCCCc-eecCCCeEEEEecC---CEEEEE-ECCeEEEEECCCCCCCCCCc
Confidence 6644 233333 45 7999976543221110 11134677777653 333333 69999999765422111111
Q ss_pred CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q 046451 305 AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSR 342 (719)
Q Consensus 305 ~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~ 342 (719)
.....|..|+...+. .++.. ||+|..|-......
T Consensus 216 ~~~~~v~~i~~G~~h--~~al~--~g~v~~wG~n~~gq 249 (282)
T 3qhy_B 216 EALSGVSAIASGEWY--SLALK--NGKVIAWGSSRTAP 249 (282)
T ss_dssp GGGSSCCEEEECSSC--EEEEE--TTEEEEESTTCCCC
T ss_pred ccCCCceEEEcCCCE--EEEEE--CCEEEEecCCCCcc
Confidence 112246666655443 34333 89999997766443
No 359
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.08 E-value=1.1 Score=48.54 Aligned_cols=121 Identities=11% Similarity=0.010 Sum_probs=75.8
Q ss_pred CCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCC-----C------ceEEeeCCCCCeeEEEeCCCCCCeEEEEe
Q 046451 216 IKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTM-----S------PVKEFVGHTKGVIAMSWCPNDSSYLLTCA 284 (719)
Q Consensus 216 ~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~-----~------~~~~~~~h~~~V~~v~~sp~d~~~l~sgs 284 (719)
.......+.++|||+++++.+-.+. ++.++|+++.. + .+.....-..+-...+|.+ +|....+.-
T Consensus 321 ~pksPHGv~vsPDGkyi~v~GKLsp---tvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~-~G~aYTtlf 396 (638)
T 3sbq_A 321 VPKNPHGCNTSSDGKYFIAAGKLSP---TCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDG-RGNAYTTLF 396 (638)
T ss_dssp ESSSCCCEEECTTSCEEEEECTTSS---BEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECS-SSEEEEEET
T ss_pred CCCCCcceeeCCCCCEEEEcCCCCC---eEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECC-CCceEeeee
Confidence 3445567899999987666666666 99999997411 1 1111111234567889998 776666667
Q ss_pred CCCcEEEEECCCC----------eEEEEecCCCCCeEEeEE------cCCCCCEEEEEe---CCC----------cEEEE
Q 046451 285 KDNRTICWDTVSG----------EIVSELPAGTNWNFDIHW------YPKIPGVISASS---FDG----------KIGIY 335 (719)
Q Consensus 285 ~Dg~I~iwd~~~~----------~~~~~l~~h~~~v~~l~~------spdg~~~las~s---~Dg----------~I~iw 335 (719)
-|..|.-|++... ..+..+..|-. +-.+.- .+|| ++|++.. .|. .-.+.
T Consensus 397 idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Yq-pGH~~~~~get~~~dG-k~lv~lnK~skdrfl~vGpl~pen~Qli 474 (638)
T 3sbq_A 397 IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQ-PGHLHASLCETNEADG-KWLVALSKFSKDRFLPVGPLHPENDQLI 474 (638)
T ss_dssp TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSC-EEEEEETTTTSTTCCS-CEEEEEESCCTTSSCCCSSSCCEEEEEE
T ss_pred ecceEEEEeccHHHHHhcCccCCeeeeccccccC-CcccccCCCccCCCCc-cEEEEecccccccCcCCCCCCCCcceeE
Confidence 8999999998653 46666666544 333322 4666 5666654 243 23677
Q ss_pred eCCCCcc
Q 046451 336 NIEGCSR 342 (719)
Q Consensus 336 d~~~~~~ 342 (719)
|+.+.+.
T Consensus 475 dIsGdkM 481 (638)
T 3sbq_A 475 DISGDEM 481 (638)
T ss_dssp ECSSSSC
T ss_pred ecCCCce
Confidence 7766543
No 360
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=90.37 E-value=29 Score=39.64 Aligned_cols=159 Identities=5% Similarity=-0.014 Sum_probs=70.4
Q ss_pred EEEEEEeCCCCCEEEEEeCC-CcEEEEcCCCCCCCCccCCccCC----------CCCCCCCeEEEEecCCCC------cE
Q 046451 126 VRGLEFNSFTPNLLASGADD-GEICIWDLSAPAEPSHFPPLRGN----------GSAAQGEISFVSWNSKVQ------HI 188 (719)
Q Consensus 126 V~~l~fsp~~~~~lasgs~d-g~I~iwdl~~~~~~~~~~~l~~~----------~~~h~~~I~~l~~sp~g~------~~ 188 (719)
+..|+++|.+.+.|+.+... +.|+ ...+.++....+..+... .......+..+.+++... ..
T Consensus 134 ~~~l~~~p~~~~~v~~g~~~g~gl~-~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~ 212 (737)
T 2cn3_A 134 GERLAIDPNDNRILYLGTRCGNGLW-RSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKT 212 (737)
T ss_dssp CCCEEECSSCTTCEEEECSTTCCEE-EESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSC
T ss_pred cceEEECCCCCCEEEEeeccCCcEE-EeCCCCcceecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCE
Confidence 46799998777777777643 3332 222333333332111110 001123477888877532 14
Q ss_pred EEEEeCCCcEEEEECC-CCceeEEecCCCCC-ceeEEEECCCCCcEEEEEeCCC----CCCcEEEEecCCCCCceEEeeC
Q 046451 189 LASTSYNGTTVVWDLK-KQKPVISFSESIKR-RCSVLQWNPDVATQLVVASDED----SSPALRLWDMRNTMSPVKEFVG 262 (719)
Q Consensus 189 l~s~s~dg~I~iwd~~-~~~~~~~~~~~~~~-~i~~l~~sp~g~~~l~~~s~d~----~~~~I~lwDl~~~~~~~~~~~~ 262 (719)
+.++..++.-.||... .++.-..+...... ....+.+++++ .++++..+.. ....-.||-.......-..+..
T Consensus 213 v~~~~~~~~~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~-~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~ 291 (737)
T 2cn3_A 213 IYVGVADKNESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNG-MLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITP 291 (737)
T ss_dssp EEEEESCSSCCEEEESSTTSCCEECTTCCCSSEEEEEEECTTS-EEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCS
T ss_pred EEEEecCCCccEEEEcCCCCceEECCCCCCcccceEEEECCCC-eEEEEecCCCCccccccCceEEEEeCCCCCEEEccC
Confidence 5555555432234333 33333332211111 22456677765 4444443210 0002334432222222222211
Q ss_pred -CC------CCeeEEEeCCCCCCeEEEEeCC
Q 046451 263 -HT------KGVIAMSWCPNDSSYLLTCAKD 286 (719)
Q Consensus 263 -h~------~~V~~v~~sp~d~~~l~sgs~D 286 (719)
.. .....|++++.+.+.|+.++.+
T Consensus 292 ~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~ 322 (737)
T 2cn3_A 292 IPYSSSDNRFCFAGLAVDRQNPDIIMVTSMN 322 (737)
T ss_dssp SCTTSTTCCSEEEEEEECTTCTTCEEEEEEC
T ss_pred CCCCCcccccccccEEEcCCCCCEEEEEecc
Confidence 11 1124688888776777777654
No 361
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.30 E-value=5.2 Score=45.57 Aligned_cols=152 Identities=11% Similarity=0.074 Sum_probs=82.0
Q ss_pred cEEEEEeCC----CcEEEEECCCCceeEEe-c-----CCCCCceeEEEECC-CCCcEEEEEeCCCC---CCcEEEEecCC
Q 046451 187 HILASTSYN----GTTVVWDLKKQKPVISF-S-----ESIKRRCSVLQWNP-DVATQLVVASDEDS---SPALRLWDMRN 252 (719)
Q Consensus 187 ~~l~s~s~d----g~I~iwd~~~~~~~~~~-~-----~~~~~~i~~l~~sp-~g~~~l~~~s~d~~---~~~I~lwDl~~ 252 (719)
.+++.|+.+ ..+.+||..+++....- . ......-.+++... ++ .+++.|+.++. ...+.+||..+
T Consensus 399 ~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~-~lyv~GG~~~~~~~~~dv~~yd~~t 477 (695)
T 2zwa_A 399 DVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNN-QLLLIGGRKAPHQGLSDNWIFDMKT 477 (695)
T ss_dssp CEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTT-EEEEECCBSSTTCBCCCCEEEETTT
T ss_pred EEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCC-EEEEEcCCCCCCCccccEEEEeCCC
Confidence 577777653 46889998877543322 1 01112222333332 44 57777776542 23688999876
Q ss_pred CC-CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCC--cEEEEECCCCeEEEEe-----cCCCCCeEEeEEcCCCCCEEE
Q 046451 253 TM-SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDN--RTICWDTVSGEIVSEL-----PAGTNWNFDIHWYPKIPGVIS 324 (719)
Q Consensus 253 ~~-~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg--~I~iwd~~~~~~~~~l-----~~h~~~v~~l~~spdg~~~la 324 (719)
.. ..+..+......-..+.+. ++.+++.||.++ .+.+||..+.+-...- .........+.+..+...+++
T Consensus 478 ~~W~~~~~~p~~R~~h~~~~~~--~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 478 REWSMIKSLSHTRFRHSACSLP--DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TEEEECCCCSBCCBSCEEEECT--TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CcEEECCCCCCCcccceEEEEc--CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 31 1111111111122223322 678888888655 6999999876543221 111122233555555236777
Q ss_pred EEeCC-------CcEEEEeCCCCc
Q 046451 325 ASSFD-------GKIGIYNIEGCS 341 (719)
Q Consensus 325 s~s~D-------g~I~iwd~~~~~ 341 (719)
.|+.+ +.+.+||+.+.+
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ECCcCCCCCeeeCcEEEEEccCCc
Confidence 77762 358899988876
No 362
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=90.25 E-value=0.12 Score=54.58 Aligned_cols=27 Identities=48% Similarity=1.093 Sum_probs=24.3
Q ss_pred cCcceecCCC-ceeeeeCCcEEEEccCC
Q 046451 356 RAPKWYKRPA-GASFGFGGKLVSFHPKS 382 (719)
Q Consensus 356 ~~p~w~~~~~-~~s~s~~Gklv~~~~~~ 382 (719)
++|+|+.+++ |++||||||++.|+...
T Consensus 8 ~aPkW~~rP~~gasFgFGGkLVsf~~~~ 35 (399)
T 2pm7_A 8 QAPTWYGEPSPAAHWAFGGKLVQITPDG 35 (399)
T ss_dssp -CCCSSCCCCCCCEEETTTEEEEECTTS
T ss_pred CCCccccCCCCeeEEcCCCeEEEEcCCC
Confidence 7899999999 99999999999999843
No 363
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=87.63 E-value=26 Score=35.52 Aligned_cols=115 Identities=10% Similarity=0.034 Sum_probs=66.9
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCC--CCCCCCcc
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLS--APAEPSHF 162 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~--~~~~~~~~ 162 (719)
.+++..+.+|.|+...+......... + .....+.. .+.+..+.... +.+.|+..+.+|.+..+.+. .-.....-
T Consensus 110 ~~~v~~T~~G~iKr~~l~~~~~~~r~-G-~~~i~lke-~D~lv~~~~~~-~~d~ill~T~~G~~~rf~~~~~eip~~gr~ 185 (327)
T 3uc1_A 110 PYLVLATRNGLVKKSKLTDFDSNRSG-G-IVAVNLRD-NDELVGAVLCS-AGDDLLLVSANGQSIRFSATDEALRPMGRA 185 (327)
T ss_dssp SEEEEEETTSEEEEEEGGGGCCCCSS-C-EESCBCCT-TCCEEEEEEEC-TTCEEEEEETTSEEEEEECCTTTSCCCCTT
T ss_pred CEEEEEcCCCEEEEeEHHHhhccccC-c-eEEEEECC-CCEEEEEEEec-CCCEEEEEECCCeEEEEECcccccCcCCcC
Confidence 68999999999999987543321110 0 12223333 45565555555 45678888999999888776 22111000
Q ss_pred -CCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC
Q 046451 163 -PPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK 204 (719)
Q Consensus 163 -~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~ 204 (719)
.-.+...-...+.|.++.....+ ..|+..+..|.++.-.+.
T Consensus 186 a~Gv~~i~L~~~d~Vv~~~~~~~~-~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 186 TSGVQGMRFNIDDRLLSLNVVREG-TYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp SBCEESSCCCTTCCEEEEEECCTT-CEEEEEETTSEEEEEEGG
T ss_pred CCCeeeecCCCCCEEEEEEEECCC-CEEEEEeCCCcEEEEEHH
Confidence 00000011123466666665543 478888999999888764
No 364
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=87.45 E-value=44 Score=38.04 Aligned_cols=113 Identities=12% Similarity=0.016 Sum_probs=59.0
Q ss_pred CCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccc-------cCCEEEEEEeCCCCC
Q 046451 65 ERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRH-------KGPVRGLEFNSFTPN 137 (719)
Q Consensus 65 ~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h-------~~~V~~l~fsp~~~~ 137 (719)
..|..|++++... +.|..+...|.|..++ ..+ +....+..+ ...|.+|++++.+.+
T Consensus 23 g~i~~i~~~p~~~-------~~~~~~~~~ggv~rS~-------D~G---~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~ 85 (737)
T 2cn3_A 23 GFMPGIVFNETEK-------DLIYARAAIGGAYRWD-------PST---ETWIPLLDHFQMDEYSYYGVESIATDPVDPN 85 (737)
T ss_dssp SCCCEEEECSSST-------TCEEEECSSSCEEEEE-------TTT---TEEEECCTTCCGGGGGGGCEEEEEECSSSTT
T ss_pred ceeeEEEECCCCC-------CEEEEEecCCcEEEeC-------CCC---CCEEECcCccCcccccCCCcceEEeCCCCCC
Confidence 4889999998753 4666677666665554 222 222222211 246899999986555
Q ss_pred EEEEEeCC-------CcEEEEcCC-CCCCCCccCCccCCCCC---CCCCeEEEEecCCCCcEEEEEeCC
Q 046451 138 LLASGADD-------GEICIWDLS-APAEPSHFPPLRGNGSA---AQGEISFVSWNSKVQHILASTSYN 195 (719)
Q Consensus 138 ~lasgs~d-------g~I~iwdl~-~~~~~~~~~~l~~~~~~---h~~~I~~l~~sp~g~~~l~s~s~d 195 (719)
.|+.+... +...||... .++....+. +...... ....+..|+++|.....|+.+...
T Consensus 86 ~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~-~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 86 RVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTI-LPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp CEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEE-CSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred EEEEEecccccccccCCccEEEeCCCCCCcccCC-CCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 55555421 124455443 333333321 1000000 011346788988765566666643
No 365
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.25 E-value=32 Score=40.57 Aligned_cols=38 Identities=16% Similarity=0.224 Sum_probs=32.2
Q ss_pred CeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec
Q 046451 266 GVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP 304 (719)
Q Consensus 266 ~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~ 304 (719)
.+.+++... +..++++-+.|+++|||++.+++++.+..
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 456677766 77899999999999999999999988764
No 366
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.01 E-value=37 Score=39.99 Aligned_cols=38 Identities=21% Similarity=0.162 Sum_probs=31.4
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec
Q 046451 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS 213 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~ 213 (719)
.+.++....+. .++++-+.|+++++|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~-~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTT-TEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCC-cEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56667766664 689999999999999999999988765
No 367
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=85.45 E-value=37 Score=35.16 Aligned_cols=215 Identities=11% Similarity=0.072 Sum_probs=106.3
Q ss_pred ccCccceEEEcCCCCeEEEeeccceeec----cc---CCCceEEEEEeecc--CCcccceee-cccCCCCCceeeeec-C
Q 046451 6 GINRSASVAFAPDAPYMAAGTMAGAVDL----SF---SSSANLEIFKLDFQ--SEDRDLLLV-GESPSSERFNRLAWG-K 74 (719)
Q Consensus 6 ~~~~V~~vafSpdg~~Latgs~dG~v~v----~~---s~~~~i~iwd~~~~--~~~~~~~~~-~~~~~~~~V~~l~~s-p 74 (719)
++-.|..+....++++-+.= .|.+.. .. ...-.|.+||+.++ +..+.+.+- ........+.++++. .
T Consensus 85 ~lvsV~~v~iD~~~rLWVLD--tG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~ 162 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRRLWVVD--IGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVA 162 (381)
T ss_dssp SSSCEEEEEECTTCEEEEEE--CSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEES
T ss_pred ceEEeeEEEEcCCCcEEEEe--CCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecc
Confidence 34567777788877765542 233221 00 23456788888877 555555442 122234567888887 2
Q ss_pred C--CCCCCCCccceEEE-EcCCCcEEEEcCCccccCCCCCCCCce-----------eeeccc----cCCEEEEEEeCCC-
Q 046451 75 N--GSGSEDFSLGLVAG-GLVDGSIDIWNPLSLISSGETGGNPLI-----------AHLSRH----KGPVRGLEFNSFT- 135 (719)
Q Consensus 75 ~--g~~~~~~~~~~las-gs~dg~I~lwd~~~~~~~~~~~~~~~~-----------~~l~~h----~~~V~~l~fsp~~- 135 (719)
+ +.+. ..++.. =+..+-|.|+|+.+.. .++.. ..+.+. ...|..|++++++
T Consensus 163 ~~~~~c~----~~~aYItD~~~~gLIVydl~~~~------swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~ 232 (381)
T 3q6k_A 163 NPKGDCS----ETFVYITNFLRGALFIYDHKKQD------SWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDS 232 (381)
T ss_dssp CTTTTSC----SEEEEEEETTTTEEEEEETTTTE------EEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCT
T ss_pred cCCCCCC----ccEEEEEcCCCCcEEEEECCCCc------EEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcC
Confidence 2 1100 033333 3346789999984321 11111 111111 2478889998831
Q ss_pred --CCEEEEEeCCC-cEEEEc---CCCCCCCCccCCccCCCCCCCCCeEEEEec-CCCCcEEEEEeCCCcEEEEECCC-C-
Q 046451 136 --PNLLASGADDG-EICIWD---LSAPAEPSHFPPLRGNGSAAQGEISFVSWN-SKVQHILASTSYNGTTVVWDLKK-Q- 206 (719)
Q Consensus 136 --~~~lasgs~dg-~I~iwd---l~~~~~~~~~~~l~~~~~~h~~~I~~l~~s-p~g~~~l~s~s~dg~I~iwd~~~-~- 206 (719)
++.|.-....+ .++-.. |++......+..+ + ..+....-..++++ .+| .++++--....|..|+..+ .
T Consensus 233 ~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~-G-~kg~~s~~~~~~~D~~~G-~ly~~~~~~~aI~~w~~~~~~~ 309 (381)
T 3q6k_A 233 EGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL-G-NRGKYNDAIALAYDPKTK-VIFFAEANTKQVSCWNTQKMPL 309 (381)
T ss_dssp TSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-E-ECCTTCCEEEEEECTTTC-EEEEEESSSSEEEEEETTSCSB
T ss_pred CCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-e-ecCCCCCcceEEEeCCCC-eEEEEeccCCeEEEEeCCCCcc
Confidence 45555554443 333222 2222221111101 1 01112234456675 454 6777777788999999875 1
Q ss_pred --ceeEEe-cCCCCCceeEEEECCCCCcEEEEE
Q 046451 207 --KPVISF-SESIKRRCSVLQWNPDVATQLVVA 236 (719)
Q Consensus 207 --~~~~~~-~~~~~~~i~~l~~sp~g~~~l~~~ 236 (719)
+....+ ....-.....+.+..+| ++++.+
T Consensus 310 ~~~n~~~l~~d~~l~~pd~~~i~~~g-~Lwv~s 341 (381)
T 3q6k_A 310 RMKNTDVVYTSSRFVFGTDISVDSKG-GLWFMS 341 (381)
T ss_dssp CGGGEEEEEECTTCCSEEEEEECTTS-CEEEEE
T ss_pred ccCceEEEEECCCccccCeEEECCCC-eEEEEE
Confidence 112222 21223346777777676 344443
No 368
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=84.43 E-value=0.73 Score=26.06 Aligned_cols=20 Identities=40% Similarity=0.597 Sum_probs=16.7
Q ss_pred hhhhhHHHHHHHHHHHHccC
Q 046451 640 REIEDNSRKIGALFAKLNSG 659 (719)
Q Consensus 640 ~~~~d~~krl~~l~~~l~~~ 659 (719)
+++||.+.||.-|-.||+.|
T Consensus 8 keledlqerlrklrkklrsg 27 (27)
T 3twe_A 8 KELEDLQERLRKLRKKLRSG 27 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHhcCC
Confidence 56899999999999999875
No 369
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=83.92 E-value=42 Score=34.59 Aligned_cols=67 Identities=12% Similarity=0.088 Sum_probs=43.0
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA 155 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~ 155 (719)
.+|+..+..|.++...+...... ...+ .....+.. .+.+..+.... +...|+..+.+|.+..++...
T Consensus 114 ~~ll~~T~~G~vKrt~l~e~~~~-~~~G-~~ai~L~~-~d~lv~v~~~~-~~~~i~l~T~~G~~irf~~~~ 180 (370)
T 3l6v_A 114 RYVFMATRNGTVKKTPLSEFAFR-LARG-KIAINLDE-GDALVGVALTD-GDRDVLLFASNGKTVRFGEST 180 (370)
T ss_dssp CEEEEEETTSEEEEEEGGGGCSC-CTTC-EESSCCCT-TCCEEEEEEEC-SCCEEEEEETTSEEEEEEGGG
T ss_pred cEEEEEeCCCeEEEeEHHHhhcc-cCCc-eEEEEeCC-CCEEEEEEEeC-CCceEEEEeCCCeEEEEEccc
Confidence 58999999999999987554321 1111 22223433 45566666554 556788888899988887543
No 370
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=83.55 E-value=64 Score=36.51 Aligned_cols=204 Identities=12% Similarity=0.056 Sum_probs=103.8
Q ss_pred EEEE-EeCCCCCEEE-EEeCC----CcEEEEcCCCCCCCCccCCccCCCCCCC-----CCeEEEEecCCCCcEEEEEe--
Q 046451 127 RGLE-FNSFTPNLLA-SGADD----GEICIWDLSAPAEPSHFPPLRGNGSAAQ-----GEISFVSWNSKVQHILASTS-- 193 (719)
Q Consensus 127 ~~l~-fsp~~~~~la-sgs~d----g~I~iwdl~~~~~~~~~~~l~~~~~~h~-----~~I~~l~~sp~g~~~l~s~s-- 193 (719)
..+. +++ ++++++ +-+.. ..|+++|+.+++.+..- +.. .... .....++|..++ .++++..
T Consensus 132 ~g~~~~~~-~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~--~~~--~~k~~~~~~~~~~~~~W~d~~-~~~~~~~~~ 205 (711)
T 4hvt_A 132 RGVSNCFQ-NPNRYLISMSFGGKDEMFFREWDLEKKDFVKNG--FEP--ITNSGKLLEGKFTYPTWINKD-TIIFNLVLH 205 (711)
T ss_dssp EEEEECSS-STTEEEEEEEETTCSEEEEEEEETTTTEECTTC--SCC--BCTTCCBCCEETCCEEEEETT-EEEECCCCS
T ss_pred eceeecCC-CCCEEEEEeCCCCCceeEEEEEECCcCCcCCCC--ccc--ccccccccccccceeeEECCC-EEEEEeCCC
Confidence 4445 777 555544 44433 36999999988754321 110 0001 012345776443 3444321
Q ss_pred --------CCCcEEEEECCCCc--eeEEecCCCCCceeEEEECCCCCc----EEEEEeCCCCCCcEEEEecCCCCCceEE
Q 046451 194 --------YNGTTVVWDLKKQK--PVISFSESIKRRCSVLQWNPDVAT----QLVVASDEDSSPALRLWDMRNTMSPVKE 259 (719)
Q Consensus 194 --------~dg~I~iwd~~~~~--~~~~~~~~~~~~i~~l~~sp~g~~----~l~~~s~d~~~~~I~lwDl~~~~~~~~~ 259 (719)
....|+.|.+-+.. -...+.............+.++.. ++++.+.+.....+++.|.......+..
T Consensus 206 ~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (711)
T 4hvt_A 206 KNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQK 285 (711)
T ss_dssp TTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEE
T ss_pred CCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceE
Confidence 12468888876542 223333222222334556677654 3554443332235677776543233333
Q ss_pred eeCCCCCeeEEEeCCCCCCeEEEE----------eCCCcEEEEECCCCe-------EEEE-e-cCCCCCeEEeEEcCCCC
Q 046451 260 FVGHTKGVIAMSWCPNDSSYLLTC----------AKDNRTICWDTVSGE-------IVSE-L-PAGTNWNFDIHWYPKIP 320 (719)
Q Consensus 260 ~~~h~~~V~~v~~sp~d~~~l~sg----------s~Dg~I~iwd~~~~~-------~~~~-l-~~h~~~v~~l~~spdg~ 320 (719)
+..... ..+..+. ++.+++.. ...+.|.+.|+.++. .... + ......+.++.|..+
T Consensus 286 l~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-- 360 (711)
T 4hvt_A 286 INMPSD--ATLQGSF-KEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-- 360 (711)
T ss_dssp CCSCTT--CEEEEEE-TTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS--
T ss_pred eecCCc--ceEeeeE-CCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC--
Confidence 322222 1222333 44444422 246779999886531 1222 2 223346788999876
Q ss_pred CEEEEEeCCC--cEEEEeCCCCc
Q 046451 321 GVISASSFDG--KIGIYNIEGCS 341 (719)
Q Consensus 321 ~~las~s~Dg--~I~iwd~~~~~ 341 (719)
.++++...++ .|.++++.+++
T Consensus 361 ~l~~~~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 361 RVFLATYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp CEEEEEEETTEEEEEEECEETTE
T ss_pred EEEEEEEECCEEEEEEEECCCCc
Confidence 4888888787 46677776553
No 371
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=81.58 E-value=48 Score=33.52 Aligned_cols=196 Identities=13% Similarity=0.036 Sum_probs=103.0
Q ss_pred ceEEEEcCCCcEEEEcCCccccC---CCCCCCCcee---eeccccCCEEEEEEeCC--CCCEEEEEeCCCcEEEEcCCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISS---GETGGNPLIA---HLSRHKGPVRGLEFNSF--TPNLLASGADDGEICIWDLSAP 156 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~---~~~~~~~~~~---~l~~h~~~V~~l~fsp~--~~~~lasgs~dg~I~iwdl~~~ 156 (719)
..|+.-+..|.++-....+.... ..+ ..+. .+. ....|..+..... +..+++..+.+|.|+...+...
T Consensus 54 d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G---~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~ 129 (327)
T 3uc1_A 54 DLILFFTTQGRVYRAKAYDLPEASRTARG---QHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDF 129 (327)
T ss_dssp SEEEEEETTSEEEEEEGGGSCBCCSSSCC---EEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGG
T ss_pred CEEEEEeCCCeEEEEEHHHCcCCCccCCC---EEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHh
Confidence 45665666777665544322211 112 2111 122 2345555443331 4679999999999999887654
Q ss_pred CCCCc--cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC--CC---------ceeEEecCCCCCceeEE
Q 046451 157 AEPSH--FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK--KQ---------KPVISFSESIKRRCSVL 223 (719)
Q Consensus 157 ~~~~~--~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~--~~---------~~~~~~~~~~~~~i~~l 223 (719)
..... +..+. .. ..+.+..+...... ..|+..+.+|.+..+... .- .....+. ....|.++
T Consensus 130 ~~~~r~G~~~i~--lk-e~D~lv~~~~~~~~-d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~--~~d~Vv~~ 203 (327)
T 3uc1_A 130 DSNRSGGIVAVN--LR-DNDELVGAVLCSAG-DDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN--IDDRLLSL 203 (327)
T ss_dssp CCCCSSCEESCB--CC-TTCCEEEEEEECTT-CEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC--TTCCEEEE
T ss_pred hccccCceEEEE--EC-CCCEEEEEEEecCC-CEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC--CCCEEEEE
Confidence 32211 10011 11 13355555444443 467778889998888776 21 1122232 45556666
Q ss_pred EECCCCCcEEEEEeCCCCCCcEEEEecCCCC------CceEEee--CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 224 QWNPDVATQLVVASDEDSSPALRLWDMRNTM------SPVKEFV--GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 224 ~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~------~~~~~~~--~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
....++ ..++..+..| .++.-.+..-. .-+..+. ...+.+..+.... +...++..+.+|.+..++..
T Consensus 204 ~~~~~~-~~ll~~T~~G---~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~-~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 204 NVVREG-TYLLVATSGG---YAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVD-DDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp EECCTT-CEEEEEETTS---EEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEEC-TTCEEEEEEGGGCEEEEEGG
T ss_pred EEECCC-CEEEEEeCCC---cEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeC-CCccEEEEcCCCeEEEEehh
Confidence 655544 3577777776 77777653211 1122221 1123455544443 45567777778887777654
No 372
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=77.94 E-value=0.45 Score=59.03 Aligned_cols=9 Identities=22% Similarity=0.471 Sum_probs=3.8
Q ss_pred CCcEEEEcc
Q 046451 372 GGKLVSFHP 380 (719)
Q Consensus 372 ~Gklv~~~~ 380 (719)
.|+++.++.
T Consensus 1384 ~G~~~~itR 1392 (1752)
T 3h0g_A 1384 RGHLMAITR 1392 (1752)
T ss_dssp SSSCCCCCT
T ss_pred CCeEEeech
Confidence 344444443
No 373
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=77.24 E-value=64 Score=32.48 Aligned_cols=118 Identities=11% Similarity=-0.014 Sum_probs=65.4
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCcc-C
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF-P 163 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~-~ 163 (719)
.+|+..+.+|.++...+..........+ .....+.. .+.+..+.... +.+.|+..+.+|.+..++...-...... .
T Consensus 107 ~~ll~~T~~G~iKrt~l~e~~~~~r~~G-~~ai~l~e-~d~lv~~~~~~-~~~~i~l~T~~G~~irf~~~ev~~~gR~a~ 183 (323)
T 1wp5_A 107 GYFLFVTRNGMVKKTELKHYKAQRYSKP-LTGINLKN-DDQVVDVHLTD-GMNELFLVTHNGYALWFDESEVSIVGVRAA 183 (323)
T ss_dssp CEEEEEETTSEEEEEEGGGGCCSCCSSC-EECSCCCT-TCCEEEEEEEC-SCSEEEEEETTSEEEEEEGGGSCBCCSSCC
T ss_pred ceEEEEeCCCeEEEeEHHHhhhccccCc-eEEEEeCC-CCEEEEEEEeC-CCCEEEEEeCCCcEEEEEHHHCcccCCCCc
Confidence 5788899999999998854432110111 11222332 25666665554 5567888899999888876532211000 0
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK 205 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~ 205 (719)
-.+...-...+.|.++....++...|++.+..|..+..++..
T Consensus 184 GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 184 GVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp CEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred CEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 001111112345666654444322677788888888777643
No 374
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=76.18 E-value=75 Score=32.74 Aligned_cols=242 Identities=12% Similarity=0.044 Sum_probs=120.7
Q ss_pred CEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCc-----cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEE
Q 046451 125 PVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSH-----FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTV 199 (719)
Q Consensus 125 ~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~-----~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~ 199 (719)
.|..|+. +....+.-..||.|+.|-......+-. ..............+..++++.-. ...+.-..||.|+
T Consensus 54 ~i~~i~~---G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~-~h~~al~~~G~v~ 129 (389)
T 3kci_A 54 RPVQLIG---GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG-KHCLALSSEGEVY 129 (389)
T ss_dssp CEEEEEE---ETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTC-SEEEEEETTSCEE
T ss_pred ceEEEEe---CCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCC-CeEEEEcCCCCEE
Confidence 4555554 456677778899999996543221100 000000000011234445555443 4556668899999
Q ss_pred EEECCCCc-----------eeEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC-------ce---E
Q 046451 200 VWDLKKQK-----------PVISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS-------PV---K 258 (719)
Q Consensus 200 iwd~~~~~-----------~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~-------~~---~ 258 (719)
.|-....- ....+.......|..|+.... ..+.-..++ .|+.|-...... .. .
T Consensus 130 ~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~---hs~alt~~G---~v~~wG~n~~GqLG~~~~~~~~~p~ 203 (389)
T 3kci_A 130 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA---HSACVTAAG---DLYTWGKGRYGRLGHSDSEDQLKPK 203 (389)
T ss_dssp EEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSS---EEEEEETTS---CEEEEECCGGGTTCSSSCCCEEEEE
T ss_pred EEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcC---eEEEEeCCC---eEEEeCCCCCCCcCCCCCcccccce
Confidence 99754311 111111112235666665533 344444555 799996532111 00 1
Q ss_pred Eee-CCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC-----------eEEEEecC-CCCCeEEeEEcCCCCCEEEE
Q 046451 259 EFV-GHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG-----------EIVSELPA-GTNWNFDIHWYPKIPGVISA 325 (719)
Q Consensus 259 ~~~-~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~-----------~~~~~l~~-h~~~v~~l~~spdg~~~las 325 (719)
.+. .....|..++... +..+.+.-..||.|+.|-.... ..-..+.. ....|..|+...+ ..+.
T Consensus 204 ~v~~~~~~~v~~ia~G~-g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~---hs~a 279 (389)
T 3kci_A 204 LVEALQGHRVVDIACGS-GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ---FSVA 279 (389)
T ss_dssp ECGGGTTSCEEEEEECC-SSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETT---EEEE
T ss_pred EecccCCCeEEEEEEcC-CCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCC---EEEE
Confidence 111 1223566776653 3466777788999999965421 11112221 1223666665433 4444
Q ss_pred EeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceec-------------CCCceeeeeCCcEEEEccCCCC
Q 046451 326 SSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYK-------------RPAGASFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 326 ~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~-------------~~~~~s~s~~Gklv~~~~~~~~ 384 (719)
-..||.|+.|-......+..+..... ..|.-.. ....++...+|++++|+.++..
T Consensus 280 lt~~G~v~~wG~n~~GqLG~g~~~~~----~~P~~v~~l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~~G 347 (389)
T 3kci_A 280 LTKSGAVYTWGKGDYHRLGHGSDDHV----RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEG 347 (389)
T ss_dssp EETTSCEEEEECCGGGTTCSSSCCCE----EEEEECGGGTTCCEEEEEECSSEEEEEETTCCEEEEECCTTS
T ss_pred EeCCCeEEEEeCCCCCCCCCCCCccc----cCCeEeccCCCCCEEEEEeccCeEEEECCCCCEEEeeCCCCC
Confidence 56799999998765444432221111 0111000 0123455678999999987653
No 375
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=71.03 E-value=87 Score=31.17 Aligned_cols=115 Identities=11% Similarity=0.049 Sum_probs=65.7
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC-
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP- 163 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~- 163 (719)
.+|+..+.+|.++...+....... ..+ .....+..+ +.+..+.... +.+.|+..+.+|.+..++...-.......
T Consensus 110 ~~ll~~T~~G~~Krt~l~e~~~~~-r~G-~~~i~l~~~-d~lv~~~~~~-~~~~i~l~T~~G~~irf~~~~v~~~gr~a~ 185 (307)
T 1zi0_A 110 VKVFMATANGTVKKTVLTEFNRLR-TAG-KVAIKLVDG-DELIGVDLTS-GEDEVMLFSAEGKVVRFKESSVRAMGCNTT 185 (307)
T ss_dssp CEEEEEETTSEEEEEEGGGGTTCC-TTC-EESSCCCTT-CCEEEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCCTTCC
T ss_pred cEEEEEeCCCeEEEEEHHHhhccc-cCC-eEEEEECCC-CEEEEEEEeC-CCCEEEEECCCCcEEEEEHHHcCccCCCCC
Confidence 578889999999999875432211 100 122234434 5666665554 45678888889998888765322111000
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLK 204 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~ 204 (719)
-.+...-...+.|.++....++ ..|++.+..|.++-.++.
T Consensus 186 Gv~~i~L~~~d~Vv~~~~~~~~-~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 186 GVRGIRLGEGDKVVSLIVPRGD-GAILTATQNGYGKRTAVA 225 (307)
T ss_dssp CEECCCCCTTCCEEEEECCCSS-CEEEEEETTSEEEEECGG
T ss_pred CeEeEEeCCCCEEEEEEEecCC-CEEEEEEcCCceEEEEHH
Confidence 0000011123467676655443 367888899998888773
No 376
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=68.98 E-value=90 Score=30.53 Aligned_cols=129 Identities=10% Similarity=0.026 Sum_probs=68.7
Q ss_pred ccCccceEEEcC-CCCeEEEeeccceeecccCCCceEEEEEeeccC-CcccceeecccCCCCCceeeeecCCCCCCCCCc
Q 046451 6 GINRSASVAFAP-DAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQS-EDRDLLLVGESPSSERFNRLAWGKNGSGSEDFS 83 (719)
Q Consensus 6 ~~~~V~~vafSp-dg~~Latgs~dG~v~v~~s~~~~i~iwd~~~~~-~~~~~~~~~~~~~~~~V~~l~~sp~g~~~~~~~ 83 (719)
..+.|..+-... +..++++.+.+|.+ +...++.-. ......... ....+.+..+....+.
T Consensus 66 ~~e~i~~v~~~~~~~~~~v~~T~~G~i----------Kr~~l~~~~~~~~G~~~i~-lkegD~l~~~~~~~~~------- 127 (276)
T 3no0_A 66 REEKIVGAFIREKFGNRLLLATKKGYV----------KKIPLAEFEYKAQGMPIIK-LTEGDEVVSIASSVDE------- 127 (276)
T ss_dssp TTCCEEEEEEGGGSCSEEEEEETTSEE----------EEEEGGGTTTCSTTEECSC-CCTTCCEEEEEECCSS-------
T ss_pred CCCEEEEEECCcCCCCEEEEEeCCCEE----------EEEEHHHhhhhcCCeEEEe-cCCCCEEEEEEEeCCC-------
Confidence 344555553311 45677778777765 444443221 001111111 2233455554444332
Q ss_pred cceEEEEcCCCcEEEEcCCccccCC-CCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCC
Q 046451 84 LGLVAGGLVDGSIDIWNPLSLISSG-ETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAP 156 (719)
Q Consensus 84 ~~~lasgs~dg~I~lwd~~~~~~~~-~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~ 156 (719)
..|+..+.+|.+..++..+..... ...+ .....+.. .+.|..+.... +...|+..+..|.++...+...
T Consensus 128 -~~ill~T~~G~~~r~~~~eip~~gR~a~G-v~~i~L~~-~d~vv~~~~~~-~~~~ll~~T~~G~~kr~~~~e~ 197 (276)
T 3no0_A 128 -THILLFTKKGRVARFSVREVPPSTPGARG-VQGIKLEK-NDETSGLRIWN-GEPYLLVITAKGRVKKISHEEI 197 (276)
T ss_dssp -CEEEEEETTSEEEEEEGGGSCBCCTTCCC-EECCCCCT-TCCEEEEEEES-SCSEEEEEETTSCEEEEEGGGS
T ss_pred -CEEEEEECCCEEEEEEhhhCCCcCCCCCC-EEEEccCC-CCEEEEEEEeC-CCCEEEEEeCCCcEEEeEHHHc
Confidence 567788889998888765443211 1111 12223332 35566665555 4568889999999999887653
No 377
>1pzq_A Erythronolide synthase; four helix bundle, homodimer, transferase; NMR {Saccharopolyspora erythraea} SCOP: a.34.3.1
Probab=68.72 E-value=4.3 Score=27.45 Aligned_cols=17 Identities=24% Similarity=0.474 Sum_probs=15.4
Q ss_pred hhhHHHHHHHHHHHHcc
Q 046451 642 IEDNSRKIGALFAKLNS 658 (719)
Q Consensus 642 ~~d~~krl~~l~~~l~~ 658 (719)
.||+..||+-|...||.
T Consensus 30 hddvgqrlesllrrwns 46 (60)
T 1pzq_A 30 HDDVGQRLESLLRRWNS 46 (60)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhh
Confidence 49999999999999985
No 378
>3p8c_E Probable protein brick1; actin polymerization, protein binding; 2.29A {Homo sapiens}
Probab=68.56 E-value=8.4 Score=29.36 Aligned_cols=44 Identities=14% Similarity=0.256 Sum_probs=29.9
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCccchhhhhhHHHHHHHHHHHHccCC-CC
Q 046451 613 PVINTLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGD-IS 662 (719)
Q Consensus 613 ~~~~~l~~~~~~~~~~~~~~~~~~~~k~~~~d~~krl~~l~~~l~~~~-ls 662 (719)
.+++.|++--..|+.++ .....|+..++++|++|..+|..|+ ||
T Consensus 31 ~~v~FLN~F~~sce~KL------a~ln~KL~~LEr~L~iLEAklss~~~~~ 75 (75)
T 3p8c_E 31 KIADFLNSFDMSCRSRL------ATLNEKLTALERRIEYIEARVTKGETLT 75 (75)
T ss_dssp HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHSCCCC--
T ss_pred HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 45556655444455443 2346788999999999999999887 53
No 379
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=66.47 E-value=1.1e+02 Score=30.66 Aligned_cols=159 Identities=11% Similarity=-0.014 Sum_probs=79.8
Q ss_pred ceEEEEcCCCcEEEEcCCccccCC-CCCCCC--ceeeeccccCCEEEEEEeCC--CCCEEEEEeCCCcEEEEcCCCCCCC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSG-ETGGNP--LIAHLSRHKGPVRGLEFNSF--TPNLLASGADDGEICIWDLSAPAEP 159 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~-~~~~~~--~~~~l~~h~~~V~~l~fsp~--~~~~lasgs~dg~I~iwdl~~~~~~ 159 (719)
+.|+..+..|.++-+...+..... ...+.. ....+. ..+.|..+..... +..+|+.++.+|.++...+......
T Consensus 51 d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~ 129 (323)
T 1wp5_A 51 DVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQ 129 (323)
T ss_dssp SEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCS
T ss_pred CEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhc
Confidence 466666778876666553322111 011110 111122 2334555433221 2567999999999999887543322
Q ss_pred C---ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCC-------ceeEEecCCCCCceeEEEECCCC
Q 046451 160 S---HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQ-------KPVISFSESIKRRCSVLQWNPDV 229 (719)
Q Consensus 160 ~---~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~-------~~~~~~~~~~~~~i~~l~~sp~g 229 (719)
. -+..++. . ..+.+..+...... ..|+..+.+|.+..++...- +-+.-+.......|.++....++
T Consensus 130 ~r~~G~~ai~l--~-e~d~lv~~~~~~~~-~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~ 205 (323)
T 1wp5_A 130 RYSKPLTGINL--K-NDDQVVDVHLTDGM-NELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSK 205 (323)
T ss_dssp CCSSCEECSCC--C-TTCCEEEEEEECSC-SEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCT
T ss_pred cccCceEEEEe--C-CCCEEEEEEEeCCC-CEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCC
Confidence 1 1100111 1 12455555544433 46777888999888876431 11121221234556665443443
Q ss_pred CcEEEEEeCCCCCCcEEEEecC
Q 046451 230 ATQLVVASDEDSSPALRLWDMR 251 (719)
Q Consensus 230 ~~~l~~~s~d~~~~~I~lwDl~ 251 (719)
...+++.+..+ ..+..++.
T Consensus 206 ~~~ll~vt~~G---~gKr~~~~ 224 (323)
T 1wp5_A 206 DESIVVATQRG---AVKKMKLT 224 (323)
T ss_dssp TCEEEEEETTS---EEEEEEGG
T ss_pred CcEEEEEECCC---ceEEEEHH
Confidence 32466666666 56666664
No 380
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=64.73 E-value=1.2e+02 Score=30.29 Aligned_cols=116 Identities=14% Similarity=0.060 Sum_probs=67.1
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCcc-C
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHF-P 163 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~-~ 163 (719)
..|+..+.+|.++...+....... ..+ .....+.. .+.+..+.... +...|+..+.+|.+..+.+..-.....- .
T Consensus 115 ~~ll~~T~~G~~kr~~l~~~~~~r-~~G-~~~i~L~~-~d~lv~~~~~~-~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~ 190 (312)
T 1suu_A 115 AYLLLTTASGKIARFESTDFKAVK-SRG-VIVIKLND-KDFVTSAEIVF-KDEKVICLSKKGSAFIFNSRDVRLTNRGTQ 190 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGGCC-----C-EECBCCCT-TCCEEEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCCTTBC
T ss_pred CEEEEEeCCCeEEEEEHHHhhccC-CCc-EEEEecCC-CCEEEEEEEeC-CCCEEEEEeCCCcEEEEEHHHccccCCCCC
Confidence 578888999999999886543211 111 22223443 55666666654 5567888999999999877542111000 0
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK 205 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~ 205 (719)
-.+...-...+.|..+....++ ..+++.+.+|.++..++..
T Consensus 191 Gv~~i~L~~~d~vv~~~~v~~~-~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 191 GVCGMKLKEGDLFVKVLSVKEN-PYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp CEECCCCCTTCCEEEEEECTTC-SEEEEEETTSEEEEEEGGG
T ss_pred CeEeEEeCCCCEEEEEEEECCC-CeEEEEECCCceEEEEHHH
Confidence 0000001123456666554443 3677888899988888753
No 381
>1aq5_A Matrilin-1, CMP, cartilage matrix protein; coiled-coil, heptad repeat, interchain disulfide bonds, oligomerization domain, trimer; NMR {Gallus gallus} SCOP: h.1.6.1
Probab=62.95 E-value=15 Score=25.11 Aligned_cols=18 Identities=28% Similarity=0.482 Sum_probs=15.2
Q ss_pred hhhhhhHHHHHHHHHHHH
Q 046451 639 KREIEDNSRKIGALFAKL 656 (719)
Q Consensus 639 k~~~~d~~krl~~l~~~l 656 (719)
.++++++.|||+.|..+|
T Consensus 29 t~kL~~vt~rle~lEnrl 46 (47)
T 1aq5_A 29 QQKLEAVAKRIEALENKI 46 (47)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 466999999999998765
No 382
>2ovc_A Potassium voltage-gated channel subfamily KQT MEM; potassium channel, ION channel assemb coiled-coil, tetramer, transport protein; 2.07A {Homo sapiens}
Probab=62.68 E-value=2.6 Score=26.60 Aligned_cols=18 Identities=11% Similarity=0.316 Sum_probs=15.6
Q ss_pred hhhhhhHHHHHHHHHHHH
Q 046451 639 KREIEDNSRKIGALFAKL 656 (719)
Q Consensus 639 k~~~~d~~krl~~l~~~l 656 (719)
.||+.+++++|+.|.|.+
T Consensus 16 E~qv~~md~KLd~l~~~~ 33 (33)
T 2ovc_A 16 EKQVQSIEHKLDLLLGFY 33 (33)
T ss_dssp HHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 588999999999998753
No 383
>3bj4_A Potassium voltage-gated channel subfamily KQT member 1; coiled coil, alternative splicing, deafness, disease mutation, glycoprotein, ION transport; 2.00A {Homo sapiens}
Probab=62.06 E-value=4.6 Score=27.91 Aligned_cols=19 Identities=5% Similarity=0.246 Sum_probs=17.6
Q ss_pred hhhhhhHHHHHHHHHHHHc
Q 046451 639 KREIEDNSRKIGALFAKLN 657 (719)
Q Consensus 639 k~~~~d~~krl~~l~~~l~ 657 (719)
.|++.+++++|+.|.|.++
T Consensus 23 E~qV~~md~KLd~l~~~~~ 41 (49)
T 3bj4_A 23 EDKVTQLDQRLALITDMLH 41 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4889999999999999987
No 384
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=58.20 E-value=1.2e+02 Score=33.24 Aligned_cols=58 Identities=16% Similarity=0.186 Sum_probs=39.4
Q ss_pred eeEEEeCCCCCCeEEEEeCC------------CcEEEEECCCCeEEEEecCC-CCCeEEeEEcCCCCCEEEE
Q 046451 267 VIAMSWCPNDSSYLLTCAKD------------NRTICWDTVSGEIVSELPAG-TNWNFDIHWYPKIPGVISA 325 (719)
Q Consensus 267 V~~v~~sp~d~~~l~sgs~D------------g~I~iwd~~~~~~~~~l~~h-~~~v~~l~~spdg~~~las 325 (719)
.-.|+|++ .++++++-..+ +.+.+.+..+++....+.+. ...++.++|+||+..+++.
T Consensus 478 PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 35689999 77755544322 34667777788876666554 3579999999999544444
No 385
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=58.04 E-value=31 Score=38.84 Aligned_cols=70 Identities=11% Similarity=0.116 Sum_probs=44.0
Q ss_pred CeeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCC------Ce-------EEeEEcCCCCCEEEEEe--CCC
Q 046451 266 GVIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELPAGTN------WN-------FDIHWYPKIPGVISASS--FDG 330 (719)
Q Consensus 266 ~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~------~v-------~~l~~spdg~~~las~s--~Dg 330 (719)
.|.++.+ +..+|++-+.|.++|+||+++++++.+..-... ++ .-+... + .++++-+ .+|
T Consensus 223 ~Is~~~~---~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~--~-~~lv~y~P~~~G 296 (729)
T 3f7f_A 223 VISCKLF---HERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLY--N-NTLVTLLPLENG 296 (729)
T ss_dssp EEEEEEE---TTTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEES--S-SEEEEEETTTTC
T ss_pred eEEEecc---CCcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhhe--e-eEEEEEecCCCC
Confidence 3555555 457999999999999999999998887654111 00 001111 1 3454433 468
Q ss_pred cEEEEeCCCCc
Q 046451 331 KIGIYNIEGCS 341 (719)
Q Consensus 331 ~I~iwd~~~~~ 341 (719)
..++|++....
T Consensus 297 ~Fk~~~l~~~~ 307 (729)
T 3f7f_A 297 LFQMGTLLVDS 307 (729)
T ss_dssp EEEEEEEEC--
T ss_pred eEEEEEEEEcC
Confidence 99999986543
No 386
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=57.75 E-value=1.5e+02 Score=29.38 Aligned_cols=196 Identities=12% Similarity=0.080 Sum_probs=105.9
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCC---CCC---
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDLSA---PAE--- 158 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~---~~~--- 158 (719)
.++++.+.+|.|+-..+........+..-.....+.. .+.+..+.... ..+.++..+..|.++-+.... ...
T Consensus 9 ~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~-~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~ 86 (312)
T 1suu_A 9 NIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVN-THDYLFMISNEGKLYLINAYEIKDSSRASK 86 (312)
T ss_dssp EEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEE-TTCEEEEEETTSEEEEEEGGGSCC------
T ss_pred CEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEEC-CCCEEEEEECCCeEEEEEHHHCCCCCccCC
Confidence 6788999999999887744322111000011112232 34455555444 456788888899877665432 111
Q ss_pred ---CCccCCccCCCCCCCCCeEEEEecCC--CCcEEEEEeCCCcEEEEECCC-------CceeEEecCCCCCceeEEEEC
Q 046451 159 ---PSHFPPLRGNGSAAQGEISFVSWNSK--VQHILASTSYNGTTVVWDLKK-------QKPVISFSESIKRRCSVLQWN 226 (719)
Q Consensus 159 ---~~~~~~l~~~~~~h~~~I~~l~~sp~--g~~~l~s~s~dg~I~iwd~~~-------~~~~~~~~~~~~~~i~~l~~s 226 (719)
+... +.. ...+.|.++....+ ....|+..+.+|.++...+.. +.....+. ....+..+...
T Consensus 87 G~~i~~~--l~l---~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~--~~d~lv~~~~~ 159 (312)
T 1suu_A 87 GQNISEL--INL---GDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLN--DKDFVTSAEIV 159 (312)
T ss_dssp -CBGGGT--SCC---CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCC--TTCCEEEEEEE
T ss_pred CcChhhc--cCC---CCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecC--CCCEEEEEEEe
Confidence 1011 111 12234555533321 124678889999999888743 22333333 34555555554
Q ss_pred CCCCcEEEEEeCCCCCCcEEEEecCCC----C--CceE--EeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 227 PDVATQLVVASDEDSSPALRLWDMRNT----M--SPVK--EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 227 p~g~~~l~~~s~d~~~~~I~lwDl~~~----~--~~~~--~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
.+. ..++..+.++ .+..++...- . .-++ .+. ....|..+.... ++..|++.+..|.++..++.
T Consensus 160 ~~~-~~i~l~T~~G---~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~-~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 160 FKD-EKVICLSKKG---SAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVK-ENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp CTT-CEEEEEETTS---EEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECT-TCSEEEEEETTSEEEEEEGG
T ss_pred CCC-CEEEEEeCCC---cEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEEC-CCCeEEEEECCCceEEEEHH
Confidence 333 4577777776 6777766431 0 0111 122 234566665544 45678888999999988774
No 387
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=56.94 E-value=1.8e+02 Score=29.83 Aligned_cols=152 Identities=11% Similarity=0.014 Sum_probs=80.4
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCC-CceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEc---CCCCCCC-
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGN-PLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWD---LSAPAEP- 159 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~-~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwd---l~~~~~~- 159 (719)
.++++.+.+|.|+--.+........+ +. .....++ ..+.+..+.... ..+.|+..+..|.++-+. +......
T Consensus 8 ~~~v~lT~~GyIKr~~l~~y~~~~r~-g~g~~~~~lk-e~D~l~~~~~~~-t~d~ll~fT~~G~~~~~~~~eip~~~r~a 84 (370)
T 3l6v_A 8 DVVVTLSHAGYAKRQPVSAYRAQRRG-GRGRSAASTK-EEDFIDQLWLVN-THDTLLTFTSSGKVFWLPVHQLPEAGSNA 84 (370)
T ss_dssp CEEEEEESSCEEEEEEHHHHHHTCCC-CCCSEEEECS-CCCCEEEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCCTTS
T ss_pred CEEEEEeCCCEEEEeeHHHhhhhccC-CCCceecccC-CCCEEEEEEEec-CCCEEEEEeCCCeEEEEEHHHCcCCCccc
Confidence 68999999999998765332211111 00 1222233 345666666555 556777788888876554 4332111
Q ss_pred -----CccCCccCCCCCCCCCeEEEEecC--CCCcEEEEEeCCCcEEEEECCC-------CceeEEecCCCCCceeEEEE
Q 046451 160 -----SHFPPLRGNGSAAQGEISFVSWNS--KVQHILASTSYNGTTVVWDLKK-------QKPVISFSESIKRRCSVLQW 225 (719)
Q Consensus 160 -----~~~~~l~~~~~~h~~~I~~l~~sp--~g~~~l~s~s~dg~I~iwd~~~-------~~~~~~~~~~~~~~i~~l~~ 225 (719)
..+ +.. .....|.++.... +....|+.++.+|.++...+.. +.....+. ....+..+..
T Consensus 85 ~G~~i~~l--l~L---~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~--~~d~lv~v~~ 157 (370)
T 3l6v_A 85 RGRPIINW--IPL---ESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLD--EGDALVGVAL 157 (370)
T ss_dssp CCEEGGGS--CCC---CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCC--TTCCEEEEEE
T ss_pred CCcCHhhc--cCC---CCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeC--CCCEEEEEEE
Confidence 111 111 1234555554322 1235888999999999887643 22222333 3444444444
Q ss_pred CCCCCcEEEEEeCCCCCCcEEEEec
Q 046451 226 NPDVATQLVVASDEDSSPALRLWDM 250 (719)
Q Consensus 226 sp~g~~~l~~~s~d~~~~~I~lwDl 250 (719)
..+. ..++..+..+ .+..++.
T Consensus 158 ~~~~-~~i~l~T~~G---~~irf~~ 178 (370)
T 3l6v_A 158 TDGD-RDVLLFASNG---KTVRFGE 178 (370)
T ss_dssp ECSC-CEEEEEETTS---EEEEEEG
T ss_pred eCCC-ceEEEEeCCC---eEEEEEc
Confidence 4333 3566666666 5555654
No 388
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=56.84 E-value=57 Score=35.96 Aligned_cols=65 Identities=11% Similarity=0.051 Sum_probs=44.5
Q ss_pred CeEEEEecCCCCcEEEEEeCC------------CcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCC
Q 046451 175 EISFVSWNSKVQHILASTSYN------------GTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED 240 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~d------------g~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~ 240 (719)
..-.|+|++.|. ++++-..+ ..+.+.+..+++....+.......++.++|+||++++|+..-.-+
T Consensus 477 ~PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQHPG 553 (592)
T 3zwu_A 477 SPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPG 553 (592)
T ss_dssp CEEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEESTT
T ss_pred CCcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEECCC
Confidence 346789999984 55543322 245666767777666665556789999999999987776655544
No 389
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=56.04 E-value=2.3e+02 Score=30.92 Aligned_cols=42 Identities=10% Similarity=0.124 Sum_probs=32.1
Q ss_pred CCCCeEEEEecCCCCcEEEEEeCCCc----------------------------EEEEECCCCceeEEec
Q 046451 172 AQGEISFVSWNSKVQHILASTSYNGT----------------------------TVVWDLKKQKPVISFS 213 (719)
Q Consensus 172 h~~~I~~l~~sp~g~~~l~s~s~dg~----------------------------I~iwd~~~~~~~~~~~ 213 (719)
|...+.-..|+-+|..-|++...+|+ |.++|=.+++.+.++.
T Consensus 181 hyt~~~V~DlDGDGkaEIvv~TadGt~dg~g~vigd~~~dyr~~~g~il~G~eyL~vfdG~TG~~l~t~~ 250 (620)
T 2zuy_A 181 HYTQFMVYDLDGDGKAEIAMKTADGTTDGKGHIIGDEQADFRNEQGRILSGPEYLTVFKGETGEALTTVE 250 (620)
T ss_dssp TSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSCTTCCCBCTTSCBCSSCCEEEEEETTTCCEEEEEE
T ss_pred ccCceeEEEcCCCCcceEEEEccCCcccCcceeecccccccccccceEecCCeEEEEEcCCCcceeeecc
Confidence 45577888888898888888877765 4888888888776655
No 390
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=55.56 E-value=2.5e+02 Score=33.64 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=30.4
Q ss_pred eeEEEeCCCCCCeEEEEeCCCcEEEEECCCCeEEEEec
Q 046451 267 VIAMSWCPNDSSYLLTCAKDNRTICWDTVSGEIVSELP 304 (719)
Q Consensus 267 V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~~~~~~l~ 304 (719)
+.+++... +..++++-+.|+++|||++.+++++.+..
T Consensus 240 ~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455555 77899999999999999999999988864
No 391
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=52.39 E-value=2.6e+02 Score=30.39 Aligned_cols=129 Identities=16% Similarity=0.294 Sum_probs=75.8
Q ss_pred cEEEEECCCCce--eEEecCCC----------CCceeEEEECCCCCcEEEEEe----CCCCCCcEEEEecCCCCCceEEe
Q 046451 197 TTVVWDLKKQKP--VISFSESI----------KRRCSVLQWNPDVATQLVVAS----DEDSSPALRLWDMRNTMSPVKEF 260 (719)
Q Consensus 197 ~I~iwd~~~~~~--~~~~~~~~----------~~~i~~l~~sp~g~~~l~~~s----~d~~~~~I~lwDl~~~~~~~~~~ 260 (719)
.|..||.+.++. ...+.... ...+....+.-||+.-|+.++ .++ -.||...
T Consensus 293 ~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs~~iD~dG----~~L~st~--------- 359 (591)
T 2zux_A 293 MLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGSMAVDHDG----KGMYSTG--------- 359 (591)
T ss_dssp EEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETTEEECTTS----CEEEECS---------
T ss_pred EEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEeeeEECCCC----CEeeeCC---------
Confidence 588899887764 33333211 134556667778877677654 222 2355542
Q ss_pred eCCCCCeeEEEeCCCC-CCeEEEEeCCC----cEEEEECCCCeEEEEecCC--CCCeEEeEEcCCCCCEEEEEeCCCcEE
Q 046451 261 VGHTKGVIAMSWCPND-SSYLLTCAKDN----RTICWDTVSGEIVSELPAG--TNWNFDIHWYPKIPGVISASSFDGKIG 333 (719)
Q Consensus 261 ~~h~~~V~~v~~sp~d-~~~l~sgs~Dg----~I~iwd~~~~~~~~~l~~h--~~~v~~l~~spdg~~~las~s~Dg~I~ 333 (719)
.+|...+.-..|.|+. +.-++.+.+++ -..+.|..+|+.+...... .+......|.++.+.+=+-+ ++ .
T Consensus 360 ~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp~~pG~E~w~--~~--~ 435 (591)
T 2zux_A 360 LGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADIDPRYPGQEVWA--NG--S 435 (591)
T ss_dssp CCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECCCTTSSSCEEEE--TT--E
T ss_pred CCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEecCCCCCceEEEe--cC--c
Confidence 2688888888888832 34566666542 3557899999999887643 34455556666643222222 22 5
Q ss_pred EEeCCCCcc
Q 046451 334 IYNIEGCSR 342 (719)
Q Consensus 334 iwd~~~~~~ 342 (719)
||+.....+
T Consensus 436 l~~~~G~~i 444 (591)
T 2zux_A 436 LYSAKGVKI 444 (591)
T ss_dssp EECTTSCBC
T ss_pred eECCCCCEe
Confidence 677655433
No 392
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=50.47 E-value=2.3e+02 Score=29.23 Aligned_cols=244 Identities=11% Similarity=0.017 Sum_probs=118.0
Q ss_pred CCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCccC-----CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcE
Q 046451 124 GPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSHFP-----PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTT 198 (719)
Q Consensus 124 ~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~~~-----~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I 198 (719)
..|..|+. +..+.+.-..||.|+.|-......+-.-. ............|..|+.... ..+.-..||.|
T Consensus 75 ~~v~~va~---G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~~i~~va~G~~---hs~al~~~G~v 148 (423)
T 3mvd_K 75 PDAVDISA---GGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDS---HSACLLEDGRV 148 (423)
T ss_dssp SSEEEEEE---CSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSSCEEEEEECSS---EEEEEETTSCE
T ss_pred CCceEEee---CCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCCCEEEEEcCcC---eEEEEeCCCeE
Confidence 34666665 55777778899999999765432211000 000000011235667665443 45556789999
Q ss_pred EEEEC--CC-Cce--------eEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCC------------
Q 046451 199 VVWDL--KK-QKP--------VISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMS------------ 255 (719)
Q Consensus 199 ~iwd~--~~-~~~--------~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~------------ 255 (719)
+.|-. .. ++. ...........|..|+...+ ..+.-..++ .|+.|-......
T Consensus 149 ~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~~---hs~alt~~G---~v~~wG~n~~GqLG~~~~~~~~~~ 222 (423)
T 3mvd_K 149 FAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGAD---HLVILTTAG---KVFTVGCAEQGQLGRLSERSISGE 222 (423)
T ss_dssp EEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEECSS---EEEEEETTS---CEEEEECCTTSTTSSCCTTTTTSC
T ss_pred EEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecCCC---eEEEEecCC---eEEEeeCCcCCccCCCcccccccc
Confidence 99986 22 211 01111123445666666543 344444555 799996432111
Q ss_pred ----------ceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC-----------eEEEEecCCCCCeEEeE
Q 046451 256 ----------PVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG-----------EIVSELPAGTNWNFDIH 314 (719)
Q Consensus 256 ----------~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~-----------~~~~~l~~h~~~v~~l~ 314 (719)
+..........|..|+... ...++.-..||.|+.|-.... ............|..|+
T Consensus 223 ~~~~~~~~~~p~~v~~~~~~~v~~i~~g~--~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia 300 (423)
T 3mvd_K 223 GRRGKRDLLRPTQLIITRAKPFEAIWATN--YCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIA 300 (423)
T ss_dssp STTTTTTTSSCEEECCTTCCCEEEEEEET--TEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEE
T ss_pred cccccccccCCeEEeecCCccEEEEEECC--cEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEE
Confidence 1111111223455555432 222333358889999854321 11111111123466665
Q ss_pred EcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCC---ccCc--ce----ecCCCceeeeeCCcEEEEccCCCC
Q 046451 315 WYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAP---LRAP--KW----YKRPAGASFGFGGKLVSFHPKSSA 384 (719)
Q Consensus 315 ~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~---~~~p--~w----~~~~~~~s~s~~Gklv~~~~~~~~ 384 (719)
... ...+.-..||.|+.|-......+..+........ +... +. ......++...+|++++|+.+...
T Consensus 301 ~G~---~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~hs~alt~~G~v~~wG~n~~G 376 (423)
T 3mvd_K 301 GGQ---HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNN 376 (423)
T ss_dssp ECS---SEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETTEEEEEETTSCEEEEECCTTS
T ss_pred ccc---CeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCCeEEEEcCCCCEEEECCCCCC
Confidence 543 3445556789999997765444332221110000 0000 00 001123455678999999977653
No 393
>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}
Probab=47.28 E-value=4.2 Score=28.16 Aligned_cols=34 Identities=21% Similarity=0.304 Sum_probs=19.9
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCccchhhhhhHHHHHHHHHHH
Q 046451 613 PVINTLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAK 655 (719)
Q Consensus 613 ~~~~~l~~~~~~~~~~~~~~~~~~~~k~~~~d~~krl~~l~~~ 655 (719)
.+++-++..|+.+.+. .-.++||+++||+-|...
T Consensus 13 ~LL~qmq~kFq~mS~~---------I~~riDdM~~RIDdLE~s 46 (48)
T 3ci9_A 13 TLLQQMQDKFQTISDQ---------IIGRIDDMSSRIDDLEKN 46 (48)
T ss_dssp HHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHHHHH---------HHHHHHHHHhHHHHHHhh
Confidence 3445555556555533 234579999998877543
No 394
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=46.89 E-value=98 Score=37.22 Aligned_cols=38 Identities=21% Similarity=0.162 Sum_probs=29.8
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEec
Q 046451 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFS 213 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~ 213 (719)
.+.+++...+. .++++-+.|++++|||+.+++++.+..
T Consensus 239 ~~vs~~~~~~~-~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTT-TEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCc-cEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34444555553 689999999999999999999988765
No 395
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=46.25 E-value=52 Score=29.54 Aligned_cols=76 Identities=13% Similarity=0.166 Sum_probs=57.6
Q ss_pred CCCchhhHHHHHHHHHHHHHHhCCCCCCccchhhhhhHHHHHHHHHHHHcc--CCCCHHHHHHHHHHHHHHhcCChhHHH
Q 046451 608 PAHQKPVINTLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNS--GDISKNAADKLVQLCQALDNNDFGTAL 685 (719)
Q Consensus 608 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~k~~~~d~~krl~~l~~~l~~--~~ls~~~~~~l~~l~~~~~~~~~~~a~ 685 (719)
.+-...+.+.|....+.|++++ .+.++|+..||.-.-+.|+. +.-...+..+|..+++.|..+--..+.
T Consensus 83 ~P~t~el~~~l~~~~e~Lr~~L---------~~d~EelR~~l~p~~~el~~~l~~~~EelR~kl~P~~eeL~~~~~~~~e 153 (165)
T 1gs9_A 83 TPVAEETRARLSKELQAAQARL---------GADMEDVRGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDAD 153 (165)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 3333455666777777777553 57788888898888887776 347889999999999999988888888
Q ss_pred hheeeee
Q 046451 686 QIQVLLT 692 (719)
Q Consensus 686 ~i~~~l~ 692 (719)
+||..|.
T Consensus 154 eLr~kL~ 160 (165)
T 1gs9_A 154 DLQKRLA 160 (165)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 8887653
No 396
>1vf6_C Maguk P55 subfamily member 5; L27 domain, heterodimer, four-helical bundle, coiled-coil, hydrophobic packing interactions; 2.10A {Mus musculus} SCOP: a.194.1.1
Probab=43.76 E-value=17 Score=26.66 Aligned_cols=26 Identities=31% Similarity=0.446 Sum_probs=18.6
Q ss_pred HHHHHHHHHhcCChhHHHhheeeeec
Q 046451 668 KLVQLCQALDNNDFGTALQIQVLLTT 693 (719)
Q Consensus 668 ~l~~l~~~~~~~~~~~a~~i~~~l~~ 693 (719)
-..-|-+.+...||.+|.+||-.++.
T Consensus 38 Di~lllqL~~~~DFQ~A~kIhNaVs~ 63 (72)
T 1vf6_C 38 DISLLLQLVQNRDFQNAFKIHNAVTV 63 (72)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 33444456688999999999986643
No 397
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=43.71 E-value=30 Score=23.29 Aligned_cols=15 Identities=40% Similarity=0.465 Sum_probs=13.4
Q ss_pred hhHHHHHHHHHHHHc
Q 046451 643 EDNSRKIGALFAKLN 657 (719)
Q Consensus 643 ~d~~krl~~l~~~l~ 657 (719)
+|.+|||..|.+||.
T Consensus 19 e~LE~Ri~~LE~KLd 33 (43)
T 2pnv_A 19 EDFEKRIVTLETKLE 33 (43)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 899999999998884
No 398
>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 3.00A {Escherichia coli}
Probab=42.59 E-value=4e+02 Score=29.76 Aligned_cols=81 Identities=9% Similarity=0.045 Sum_probs=49.4
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccC-CCCCCCCceeeeccccCCEEEEEEeCCCCCEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISS-GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLAS 141 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~-~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~las 141 (719)
..+.|..+.-..+. .+|+.++..|.++...+...... ..+ .....+.. .+.+..+....++...++.
T Consensus 552 ~~e~i~~~~~~~~~--------~~l~~~T~~G~vk~~~l~~~~~~~~~g---~~ai~L~~-~d~lv~~~~~~~~~~~v~l 619 (716)
T 1zvu_A 552 PGATVDHMLMESDD--------QKLLMASDAGYGFVCTFNDLVARNRAG---KALITLPE-NAHVMPPVVIEDASDMLLA 619 (716)
T ss_dssp TTCCEEEEECCCTT--------CEEEEEBTTSEEEEEEGGGGCCCSTTC---EECBCCCT-TCCBCCCEECCCTTCEEEE
T ss_pred CCCeEEEEEEecCC--------ceEEEEeCCceEEEecHHHhcccCccc---eEEEeeCC-CCEEEEEEEecCCCCEEEE
Confidence 34555555433332 57888899999999988654321 111 22233333 3445455554224567888
Q ss_pred EeCCCcEEEEcCCC
Q 046451 142 GADDGEICIWDLSA 155 (719)
Q Consensus 142 gs~dg~I~iwdl~~ 155 (719)
.+.+|.+..|+...
T Consensus 620 ~t~~g~~lrf~~~~ 633 (716)
T 1zvu_A 620 ITQAGRMLMFPVSD 633 (716)
T ss_dssp EETTSEEEEEESTT
T ss_pred EeCCCeEEEEEHHH
Confidence 99999999998764
No 399
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=41.74 E-value=2.4e+02 Score=27.00 Aligned_cols=81 Identities=9% Similarity=0.045 Sum_probs=49.6
Q ss_pred CCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccC-CCCCCCCceeeeccccCCEEEEEEeCCCCCEEEE
Q 046451 63 SSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISS-GETGGNPLIAHLSRHKGPVRGLEFNSFTPNLLAS 141 (719)
Q Consensus 63 ~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~-~~~~~~~~~~~l~~h~~~V~~l~fsp~~~~~las 141 (719)
..+.|.++....++ ..|+..+..|.++...+...... ..+ .....+.. .+.+..+....++.+.|+.
T Consensus 82 ~~e~Iv~~~~~~~~--------~~lll~T~~G~~Kr~~~~e~~~~~r~G---~~~i~L~~-~d~lv~~~~~~~~~~~i~l 149 (256)
T 1zvt_A 82 PGATVDHMLMESDD--------QKLLMASDAGYGFVCTFNDLVARNRAG---KALITLPE-NAHVMPPVVIEDASDMLLA 149 (256)
T ss_dssp TTCCEEEEECCCTT--------CEEEEEBTTSEEEEEEGGGGCCCSTTC---EECBCCCT-TCCBCCCEECCCTTCEEEE
T ss_pred CCCEEEEEEEeCCC--------CEEEEEeCCCeEEEeEHHHhcccCcCc---eEEEEECC-CCEEEEEEEecCCCCEEEE
Confidence 34566666433222 56888899999999988654321 112 23333432 3455555554224567888
Q ss_pred EeCCCcEEEEcCCC
Q 046451 142 GADDGEICIWDLSA 155 (719)
Q Consensus 142 gs~dg~I~iwdl~~ 155 (719)
.+.+|.+..+++..
T Consensus 150 ~T~~G~~lrf~~~e 163 (256)
T 1zvt_A 150 ITQAGRMLMFPVSD 163 (256)
T ss_dssp EETTSEEEEEEGGG
T ss_pred EcCCCeEEEEEHHH
Confidence 99999999888754
No 400
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=39.69 E-value=2.7e+02 Score=26.97 Aligned_cols=192 Identities=10% Similarity=0.005 Sum_probs=101.4
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCCCCCCCceeeeccccCCEEEEEEeCC-CCCEEEEEeCCCcEEEEcCCCCCCCCccC
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAHLSRHKGPVRGLEFNSF-TPNLLASGADDGEICIWDLSAPAEPSHFP 163 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~fsp~-~~~~lasgs~dg~I~iwdl~~~~~~~~~~ 163 (719)
..|+.-+.+|.++-..+.+... ... .-+ +. ..+.|..+.. .+ +..+++..+.+|.|+...+.... ...-
T Consensus 36 ~~ll~fT~~G~v~~~~~~~lp~-~~~---~~l--l~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~-~~~~- 105 (276)
T 3no0_A 36 EGLFLVSNRGRVYWIAGSQALQ-GSK---VSL--KS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFE-YKAQ- 105 (276)
T ss_dssp SCEEEEETTSEEEEECSHHHHT-SEE---CCC--SS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTT-TCST-
T ss_pred CEEEEEcCCCeEEEEEhhhCcc-Ccc---ccc--CC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhh-hhcC-
Confidence 4566666788877655533221 111 112 33 3456666543 31 45789999999999999876543 1110
Q ss_pred CccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCC---------CceeEEecCCCCCceeEEEECCCCCcEEE
Q 046451 164 PLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKK---------QKPVISFSESIKRRCSVLQWNPDVATQLV 234 (719)
Q Consensus 164 ~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~---------~~~~~~~~~~~~~~i~~l~~sp~g~~~l~ 234 (719)
-.........+.+..+...... ..++..+.+|.++.++... |.....+. ....|..+....++ ..++
T Consensus 106 G~~~i~lkegD~l~~~~~~~~~-~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~--~~d~vv~~~~~~~~-~~ll 181 (276)
T 3no0_A 106 GMPIIKLTEGDEVVSIASSVDE-THILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE--KNDETSGLRIWNGE-PYLL 181 (276)
T ss_dssp TEECSCCCTTCCEEEEEECCSS-CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC--TTCCEEEEEEESSC-SEEE
T ss_pred CeEEEecCCCCEEEEEEEeCCC-CEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC--CCCEEEEEEEeCCC-CEEE
Confidence 0111111123456665555443 4677888899988887532 12222233 34555555444443 3566
Q ss_pred EEeCCCCCCcEEEEecCCCC------CceEEeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEE--EECC
Q 046451 235 VASDEDSSPALRLWDMRNTM------SPVKEFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTIC--WDTV 295 (719)
Q Consensus 235 ~~s~d~~~~~I~lwDl~~~~------~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~i--wd~~ 295 (719)
..+..| .++...+..-. +-+..+ ...+.+..+.... +.+.++..+.+|.+.. ++..
T Consensus 182 ~~T~~G---~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~-~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 182 VITAKG---RVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIK-EEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEETTS---CEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEES-SEEEEEEEETTSCEEEEEEEGG
T ss_pred EEeCCC---cEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeC-CCCEEEEEcCCCeEEEeeeCHH
Confidence 777776 67777663211 112222 2233444443332 3445666677777776 6653
No 401
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=39.49 E-value=2.9e+02 Score=27.23 Aligned_cols=239 Identities=10% Similarity=0.024 Sum_probs=118.1
Q ss_pred ceEEEEcCCCcEEEEcCCccccCCC-CCCCCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEc---CCCCCCC-
Q 046451 85 GLVAGGLVDGSIDIWNPLSLISSGE-TGGNPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWD---LSAPAEP- 159 (719)
Q Consensus 85 ~~lasgs~dg~I~lwd~~~~~~~~~-~~~~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwd---l~~~~~~- 159 (719)
.++++.+.+|.|+--.+........ +.+ .....+.. .+.+..+.... ..+.|+..+..|.++-+. +......
T Consensus 4 ~~~v~~T~~G~iKr~~~~~~~~~~~~~~g-~~~~~~ke-~D~l~~~~~~~-~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 4 DVVVTLSHQGYVKYQPLSEYEAQRRGGKG-KSAARIKE-EDFIDRLLVAN-THDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp EEEEEEETTSEEEEEECC----------------------CCEEEEEEEE-TTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred cEEEEEeCCCEEEEeeHHHhhhhccCCCC-ceeeeeCC-CCEEEEEEEEC-CCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 5788899999998877643221110 000 11112222 23444444444 456777788888866554 4332211
Q ss_pred -----CccCCccCCCCCCCCCeEEEEecC--CCCcEEEEEeCCCcEEEEECCC-------CceeEEecCCCCCceeEEEE
Q 046451 160 -----SHFPPLRGNGSAAQGEISFVSWNS--KVQHILASTSYNGTTVVWDLKK-------QKPVISFSESIKRRCSVLQW 225 (719)
Q Consensus 160 -----~~~~~l~~~~~~h~~~I~~l~~sp--~g~~~l~s~s~dg~I~iwd~~~-------~~~~~~~~~~~~~~i~~l~~ 225 (719)
..+ +. -...+.|..+.... +....++..+.+|.++...+.. +.....+. ....+..+..
T Consensus 81 ~G~~i~~~--l~---l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~--~~d~lv~~~~ 153 (307)
T 1zi0_A 81 RGRPIVNL--LP---LEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLV--DGDELIGVDL 153 (307)
T ss_dssp CCEEGGGT--SC---CCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCC--TTCCEEEEEE
T ss_pred CCeEhhhc--cC---CCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEEC--CCCEEEEEEE
Confidence 011 11 11233565554321 1234788899999999987642 11222233 2345544444
Q ss_pred CCCCCcEEEEEeCCCCCCcEEEEecCCCC------CceE--EeeCCCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC
Q 046451 226 NPDVATQLVVASDEDSSPALRLWDMRNTM------SPVK--EFVGHTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG 297 (719)
Q Consensus 226 sp~g~~~l~~~s~d~~~~~I~lwDl~~~~------~~~~--~~~~h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~ 297 (719)
..+. ..++..+.++ .+..++...-. .-++ .+. ....|.++.... ++..|++.+..|.++-.++...
T Consensus 154 ~~~~-~~i~l~T~~G---~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~-~~~~ll~~T~~G~~Kr~~~~e~ 227 (307)
T 1zi0_A 154 TSGE-DEVMLFSAEG---KVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPR-GDGAILTATQNGYGKRTAVAEY 227 (307)
T ss_dssp ECTT-CEEEEEETTS---EEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCC-SSCEEEEEETTSEEEEECGGGS
T ss_pred eCCC-CEEEEECCCC---cEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEec-CCCEEEEEEcCCceEEEEHHHh
Confidence 4333 3466666666 56666653210 0111 122 234566665554 4567888899999888876321
Q ss_pred ---------eEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 046451 298 ---------EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGC 340 (719)
Q Consensus 298 ---------~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~ 340 (719)
.....+....+.+..+....+. .-|+..+.+|.+.-+++..-
T Consensus 228 ~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~-~~l~~~t~~g~~ir~~~~~i 278 (307)
T 1zi0_A 228 PTKSRATKGVISIKVTERNGLVVGAVQVDDC-DQIMMITDAGTLVRTRVSEI 278 (307)
T ss_dssp CCCCTTSCCEESSCCCTTTCSEEEEEEECTT-CEEEEEESSCCEEEEEGGGS
T ss_pred ccCCCCCCCEEeeEecCCCCeEEEEEEeCCC-ceEEEEcCCCcEEEEecccc
Confidence 1222233233445444443333 34445555777766666554
No 402
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=35.96 E-value=16 Score=31.48 Aligned_cols=18 Identities=17% Similarity=0.567 Sum_probs=7.3
Q ss_pred CCcccchhHHHHHHHHHh
Q 046451 694 SDWDECNFWLATLKRMIK 711 (719)
Q Consensus 694 ~~~~e~~~w~~g~k~li~ 711 (719)
.+-+|+..|+.||+.||.
T Consensus 104 ~s~~e~~~Wv~gL~~L~~ 121 (131)
T 1mai_A 104 PSPADAQHWVQGLRKIIH 121 (131)
T ss_dssp SSHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 333344444444444443
No 403
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=35.58 E-value=3.8e+02 Score=27.47 Aligned_cols=241 Identities=11% Similarity=0.015 Sum_probs=121.0
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCC---CCceeeeccccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcC--CCCCCCC
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGG---NPLIAHLSRHKGPVRGLEFNSFTPNLLASGADDGEICIWDL--SAPAEPS 160 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~---~~~~~~l~~h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl--~~~~~~~ 160 (719)
..+.-..||.|+.|-....-....+.. ....-........|..|+. ...+.+.-..||.|+.|-. .....+-
T Consensus 86 h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~~i~~va~---G~~hs~al~~~G~v~~wG~~~n~~GqlG 162 (423)
T 3mvd_K 86 HNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISA---GDSHSACLLEDGRVFAWGSFRDSHGNMG 162 (423)
T ss_dssp EEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEECEECSSSEEE
T ss_pred eEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCCCEEEEEc---CcCeEEEEeCCCeEEEEeCCCCCCCCcC
Confidence 455556789999996532111000000 0011111112345666666 4466677788999999975 3221110
Q ss_pred ------ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCcee----------------------EEe
Q 046451 161 ------HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPV----------------------ISF 212 (719)
Q Consensus 161 ------~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~----------------------~~~ 212 (719)
...+... .....|..|+... ...+.-..||.|+.|-....-.+ ..+
T Consensus 163 ~~~~~~~~~p~~~---~~~~~i~~va~G~---~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v 236 (423)
T 3mvd_K 163 LTIDGNKRTPIDL---MEGTVCCSIASGA---DHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQL 236 (423)
T ss_dssp SBTTBCEEEEEES---STTCCEEEEEECS---SEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEE
T ss_pred cCCCCCCceeeEe---cCCCcEEEEecCC---CeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeEE
Confidence 0000000 1123566776543 34555678999999975432110 111
Q ss_pred cCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCc----------eEEeeCCCCCeeEEEeCCCCCCeEEE
Q 046451 213 SESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSP----------VKEFVGHTKGVIAMSWCPNDSSYLLT 282 (719)
Q Consensus 213 ~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~----------~~~~~~h~~~V~~v~~sp~d~~~l~s 282 (719)
.......|..|+.... ..++....++ .|+.|-....... ..-.......|..|+. ...+.+.
T Consensus 237 ~~~~~~~v~~i~~g~~--~~~~~~~~~g---~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~---G~~ht~a 308 (423)
T 3mvd_K 237 IITRAKPFEAIWATNY--CTFMRESQTQ---VIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAG---GQHHTVI 308 (423)
T ss_dssp CCTTCCCEEEEEEETT--EEEEEETTTC---CEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEE---CSSEEEE
T ss_pred eecCCccEEEEEECCc--EEEEEECCCC---eEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEc---ccCeEEE
Confidence 1112234555554422 2233334555 7888865432110 0011111346776665 3456667
Q ss_pred EeCCCcEEEEECCCC------------eEEEEecCCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccC
Q 046451 283 CAKDNRTICWDTVSG------------EIVSELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVG 346 (719)
Q Consensus 283 gs~Dg~I~iwd~~~~------------~~~~~l~~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~ 346 (719)
-..||.|+.|-.... .....+..-...|..|+.... ..+.-..||.|+.|=....-.+..+
T Consensus 309 lt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~---hs~alt~~G~v~~wG~n~~GqLG~g 381 (423)
T 3mvd_K 309 LTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEV---CSYAVTIDGKLYSWGSGVNNQLGVG 381 (423)
T ss_dssp EETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETT---EEEEEETTSCEEEEECCTTSCSSSS
T ss_pred EeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCC---eEEEEcCCCCEEEECCCCCCCCCCC
Confidence 788999999965321 112223333335777776543 3344467999999987765555533
No 404
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=35.27 E-value=4.7e+02 Score=28.41 Aligned_cols=42 Identities=12% Similarity=0.136 Sum_probs=33.5
Q ss_pred CCCCeEEEEecCCCCcEEEEEeCCCc----------------------------EEEEECCCCceeEEec
Q 046451 172 AQGEISFVSWNSKVQHILASTSYNGT----------------------------TVVWDLKKQKPVISFS 213 (719)
Q Consensus 172 h~~~I~~l~~sp~g~~~l~s~s~dg~----------------------------I~iwd~~~~~~~~~~~ 213 (719)
|...+....|+-+|..-+++...+|+ |.++|=.+++.+.++.
T Consensus 177 ~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEyL~vfdG~TG~~l~~~~ 246 (591)
T 2zux_A 177 HYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEYLTVFQGSTGKELVTAN 246 (591)
T ss_dssp TSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCEEEEEETTTCCEEEEEE
T ss_pred ccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcEEEEEeCCCCCEEeccc
Confidence 44568888889999888888887776 7889888888877765
No 405
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=35.25 E-value=3.7e+02 Score=27.26 Aligned_cols=248 Identities=14% Similarity=0.086 Sum_probs=123.2
Q ss_pred eEEEEcCCCcEEEEcCCccccCCCCCCCC--ceeeecc-ccCCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCCc-
Q 046451 86 LVAGGLVDGSIDIWNPLSLISSGETGGNP--LIAHLSR-HKGPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPSH- 161 (719)
Q Consensus 86 ~lasgs~dg~I~lwd~~~~~~~~~~~~~~--~~~~l~~-h~~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~~- 161 (719)
..+.-..||.|+.|-....-....+.... ....+.. ....+..++.+. +..+.+.-..||.|+.|-......+-.
T Consensus 64 ~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~-G~~h~~al~~~G~v~~wG~n~~GqLG~g 142 (389)
T 3kci_A 64 TLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNS-GGKHCLALSSEGEVYSWGEAEDGKLGHG 142 (389)
T ss_dssp EEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECT-TCSEEEEEETTSCEEEEECCGGGTTCSS
T ss_pred eEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECc-CCCeEEEEcCCCCEEEEeCCCCCcCCCC
Confidence 45555678999999653211100110000 1111111 122345566665 667777788999999996543221100
Q ss_pred ----cCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCCCcEEEEECCCCc-----------eeEEecCCCCCceeEEEEC
Q 046451 162 ----FPPLRGNGSAAQGEISFVSWNSKVQHILASTSYNGTTVVWDLKKQK-----------PVISFSESIKRRCSVLQWN 226 (719)
Q Consensus 162 ----~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~-----------~~~~~~~~~~~~i~~l~~s 226 (719)
.........-....|..|+... ...++-..||.|+.|-....- ....+.......|..++..
T Consensus 143 ~~~~~~~p~~v~~l~~~~i~~va~G~---~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G 219 (389)
T 3kci_A 143 NRSPCDRPRVIESLRGIEVVDVAAGG---AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 219 (389)
T ss_dssp SCCCEEEEEECGGGTTSCEEEEEECS---SEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CCccCcCCeEecccCCCeEEEEEeCc---CeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEc
Confidence 0000000000112566666543 345556789999999764311 0111111223456666665
Q ss_pred CCCCcEEEEEeCCCCCCcEEEEecCCCCCc---------e-EEeeC-CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECC
Q 046451 227 PDVATQLVVASDEDSSPALRLWDMRNTMSP---------V-KEFVG-HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTV 295 (719)
Q Consensus 227 p~g~~~l~~~s~d~~~~~I~lwDl~~~~~~---------~-~~~~~-h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~ 295 (719)
... ...+.-..++ .|+.|-....... . ..+.. ....|..|+.. ..+.+.-..||.|+.|-..
T Consensus 220 ~g~-~~t~~l~~~G---~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G---~~hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 220 SGD-AQTLCLTDDD---TVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG---SQFSVALTKSGAVYTWGKG 292 (389)
T ss_dssp CSS-CEEEEEETTT---EEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE---TTEEEEEETTSCEEEEECC
T ss_pred CCC-cEEEEEccCC---EEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC---CCEEEEEeCCCeEEEEeCC
Confidence 422 2344445555 7998864321110 0 11111 12246666653 3556666789999999654
Q ss_pred CC-----------eEEEEecC-CCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCC
Q 046451 296 SG-----------EIVSELPA-GTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGD 347 (719)
Q Consensus 296 ~~-----------~~~~~l~~-h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~ 347 (719)
.. ..-..+.. ....|..|+... ...+....||+|+.|=......+..+.
T Consensus 293 ~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~---~h~~al~~~G~v~~wG~n~~GqLG~g~ 353 (389)
T 3kci_A 293 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS---LHCVCCTEDGEVYTWGDNDEGQLGDGT 353 (389)
T ss_dssp GGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECS---SEEEEEETTCCEEEEECCTTSTTCSSS
T ss_pred CCCCCCCCCCccccCCeEeccCCCCCEEEEEecc---CeEEEECCCCCEEEeeCCCCCcCCCCC
Confidence 21 01111221 123466666543 344555779999999887766555443
No 406
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=35.24 E-value=5.3e+02 Score=29.06 Aligned_cols=163 Identities=10% Similarity=-0.013 Sum_probs=78.0
Q ss_pred CCCCCceeeeecCCCCCCCCCccceEEEEcCCCcEEEEcCCccccCCCCCCCCceee-ec----c----ccCCEEEEEEe
Q 046451 62 PSSERFNRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWNPLSLISSGETGGNPLIAH-LS----R----HKGPVRGLEFN 132 (719)
Q Consensus 62 ~~~~~V~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd~~~~~~~~~~~~~~~~~~-l~----~----h~~~V~~l~fs 132 (719)
+....|.+|+++|.+. ++++++...|.|...+ ..+..+..+.. +. . ....|.+|+++
T Consensus 18 g~~g~i~~i~~~p~~~-------~~~y~~~~~ggv~~S~-------DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~d 83 (763)
T 3a0f_A 18 SGGGFISGLVAHPTEK-------DLIYARTDIGGTYRWN-------AAKWEWEPITDFIINNALAGNGANLLGTESIALD 83 (763)
T ss_dssp CBCSCEEEEEECSSST-------TCEEEEESSSCEEEEE-------TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECC
T ss_pred cCCCceeEEEeCCCCC-------CEEEEEeccCcEEEEC-------CCCCCeeECccCccccccCCCcccccceeEEEEC
Confidence 3567899999999864 5666666566554433 12211111111 10 0 22458899998
Q ss_pred CCCCCEEEEEeCC-----CcEEEEcC-CCCCCCCccCCccCCCC---CCCCCeEEEEecCCCCcEEEEEeCCCcEEEEEC
Q 046451 133 SFTPNLLASGADD-----GEICIWDL-SAPAEPSHFPPLRGNGS---AAQGEISFVSWNSKVQHILASTSYNGTTVVWDL 203 (719)
Q Consensus 133 p~~~~~lasgs~d-----g~I~iwdl-~~~~~~~~~~~l~~~~~---~h~~~I~~l~~sp~g~~~l~s~s~dg~I~iwd~ 203 (719)
+.+.+.|+.+..+ ....||.. +.++....+. +..... ........|++++.+...++++..++.|. ...
T Consensus 84 p~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~-~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~-~S~ 161 (763)
T 3a0f_A 84 PHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYR-SPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLW-RST 161 (763)
T ss_dssp TTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEE-CSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEE-EES
T ss_pred CCCCCEEEEEecccccCCCCceEEEECCCCCCceecc-CCcccCccccCccccceEEECCCCCCEEEEEeCCCcEE-EEC
Confidence 8555555544321 12334433 3344443321 100000 00111246788776444555565554333 223
Q ss_pred CCCceeEEecC-----CCCCceeEEEECCCCCcEEEEEeCCC
Q 046451 204 KKQKPVISFSE-----SIKRRCSVLQWNPDVATQLVVASDED 240 (719)
Q Consensus 204 ~~~~~~~~~~~-----~~~~~i~~l~~sp~g~~~l~~~s~d~ 240 (719)
..++.-..+.. .....+..|.+++.....++++..++
T Consensus 162 DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 162 DRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp STTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred CCCcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 33333222221 11234778899886544455555553
No 407
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=33.13 E-value=74 Score=22.45 Aligned_cols=31 Identities=26% Similarity=0.164 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCccchhhhhhHHHHHHHHHHHHcc
Q 046451 615 INTLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNS 658 (719)
Q Consensus 615 ~~~l~~~~~~~~~~~~~~~~~~~~k~~~~d~~krl~~l~~~l~~ 658 (719)
++.|+..++.|+ ++++...++++.|-.+|+.
T Consensus 21 ~eaLk~E~~eLk-------------~k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 21 IELLRLELAEMK-------------EKYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp HHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHhc
Confidence 445666666666 4567777777777776664
No 408
>4g3b_A Alpha4F3D; alpha helix, de novo designed, fluorinated protein, coiled-C NOVO protein; HET: 6FL; 1.19A {Synthetic} PDB: 4g4l_A* 3twg_A*
Probab=32.87 E-value=35 Score=19.12 Aligned_cols=18 Identities=28% Similarity=0.469 Sum_probs=13.7
Q ss_pred hhhhhHHHHHHHHHHHHc
Q 046451 640 REIEDNSRKIGALFAKLN 657 (719)
Q Consensus 640 ~~~~d~~krl~~l~~~l~ 657 (719)
++++|.+.||.-.-.||+
T Consensus 8 keled~qerlrk~rkklr 25 (26)
T 4g3b_A 8 KELEDXQERLRKXRKKLR 25 (26)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 467888888887777765
No 409
>2oeq_A Protein of unknown function, DUF964; helix bundle, structural genomics, PSI-2, protein structure initiative; 2.90A {Geobacillus stearothermophilus} SCOP: a.281.1.2
Probab=32.85 E-value=1.6e+02 Score=24.61 Aligned_cols=60 Identities=13% Similarity=0.149 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCccchhhhhhHHHHHHHHHHHHccCC-CCHHHHHHHHHHHHHHhcCCh
Q 046451 615 INTLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGD-ISKNAADKLVQLCQALDNNDF 681 (719)
Q Consensus 615 ~~~l~~~~~~~~~~~~~~~~~~~~k~~~~d~~krl~~l~~~l~~~~-ls~~~~~~l~~l~~~~~~~~~ 681 (719)
|..++...+.+. +++..++.+++..+.=.-+..+-..|+ +++.+..+|.++.+.|+...-
T Consensus 25 y~~~k~A~~~l~-------~D~ea~~li~~F~~~q~~~q~~q~~G~~~~~e~~~~l~~l~~~l~~n~~ 85 (122)
T 2oeq_A 25 FQQLKRAYEDVR-------RDETAYRMFANVRDIQLRLHEKQMRGAAILPDEIEQAQKAMALAQQNEK 85 (122)
T ss_dssp HHHHHHHHHHHH-------TCTTHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTSHH
T ss_pred HHHHHHHHHHHH-------CCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCHH
Confidence 334444444444 688889999999888888888888885 999999999999999977643
No 410
>1lwu_A Fibrinogen alpha-1 chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: h.1.8.1 PDB: 1n73_A*
Probab=32.81 E-value=10 Score=31.22 Aligned_cols=55 Identities=18% Similarity=0.210 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCccchhhhhhHHHHHHHHHHHHccCC-----CCHHHHHHHHHHHH
Q 046451 614 VINTLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGD-----ISKNAADKLVQLCQ 674 (719)
Q Consensus 614 ~~~~l~~~~~~~~~~~~~~~~~~~~k~~~~d~~krl~~l~~~l~~~~-----ls~~~~~~l~~l~~ 674 (719)
|+++|+..|..- ...+..+.+..+|..+|++.|--|.++.- |-.+|.+++.++-+
T Consensus 2 i~e~lr~~l~~~------n~~dn~y~qvsedLrrrIe~LkrKV~~Qvq~i~~Lq~nVrdQvveMkR 61 (119)
T 1lwu_A 2 VSDTSGQTLNEH------NELEVRYSEVLRELERRIIHLQRRINMQLQQLTLLQHNIKTQVSQILR 61 (119)
T ss_dssp ------------------CTTTHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhhhc------cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555421 34466677888888888888887776532 56677777776654
No 411
>1fmh_B General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_B
Probab=31.92 E-value=20 Score=21.31 Aligned_cols=24 Identities=21% Similarity=0.357 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHhcCChhHHHhhee
Q 046451 666 ADKLVQLCQALDNNDFGTALQIQV 689 (719)
Q Consensus 666 ~~~l~~l~~~~~~~~~~~a~~i~~ 689 (719)
++.|..-++||.++||.+-..++.
T Consensus 3 vqalkkrvqalkarnyaakqkvqa 26 (33)
T 1fmh_B 3 VQALKKRVQALKARNYAAKQKVQA 26 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHH
Confidence 456888899999999987666553
No 412
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=31.80 E-value=59 Score=31.08 Aligned_cols=26 Identities=15% Similarity=0.064 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhcCChhHHHhheeee
Q 046451 666 ADKLVQLCQALDNNDFGTALQIQVLL 691 (719)
Q Consensus 666 ~~~l~~l~~~~~~~~~~~a~~i~~~l 691 (719)
+..|..+|+.|..++|..|.+|+..+
T Consensus 181 i~~l~~~a~~L~~~~y~~a~~i~~r~ 206 (235)
T 2odv_A 181 IRLLFNDVQTLKDGRHPQGEQMYRRV 206 (235)
T ss_dssp HHHHHHHHHHHHHTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 77999999999999999999999753
No 413
>3kyj_A CHEA3, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_A
Probab=31.06 E-value=52 Score=28.76 Aligned_cols=36 Identities=11% Similarity=0.186 Sum_probs=27.4
Q ss_pred hhhhHHHHHHHHHHHHccCC--CCHHHHHHHHHHHHHH
Q 046451 641 EIEDNSRKIGALFAKLNSGD--ISKNAADKLVQLCQAL 676 (719)
Q Consensus 641 ~~~d~~krl~~l~~~l~~~~--ls~~~~~~l~~l~~~~ 676 (719)
.+.++..+++-+|+.|++|+ +++.+++.|.+-...|
T Consensus 65 ~i~~laH~lE~ll~~lr~g~~~~~~~l~dlll~~~D~l 102 (144)
T 3kyj_A 65 VVESRAHLCEDLIGLVRDAGVPMDGEIVEILLFASDTL 102 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHH
Confidence 46677789999999999998 6877776666554444
No 414
>3pp5_A BRK1, protein brick1; triple coiled-coil, precursor of the SCAR-WAVE complex, ABI, structural protein; 1.50A {Dictyostelium discoideum}
Probab=30.98 E-value=72 Score=24.12 Aligned_cols=41 Identities=15% Similarity=0.213 Sum_probs=25.1
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCccchhhhhhHHHHHHHHHHHHcc
Q 046451 612 KPVINTLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNS 658 (719)
Q Consensus 612 ~~~~~~l~~~~~~~~~~~~~~~~~~~~k~~~~d~~krl~~l~~~l~~ 658 (719)
+.+++.|++--..|+.++ ....+|+..+++||++|..+|..
T Consensus 30 ~~~v~FLN~F~~sce~KL------a~ln~kL~~lE~~L~iLEAklsS 70 (73)
T 3pp5_A 30 QKIVEFLNKFELSTRNKL------SDLNEKLTILDRQVDYLEATFKT 70 (73)
T ss_dssp HHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHhc
Confidence 345555555444455443 23456778888888888887753
No 415
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=28.12 E-value=5e+02 Score=26.50 Aligned_cols=234 Identities=11% Similarity=0.069 Sum_probs=119.2
Q ss_pred CCEEEEEEeCCCCCEEEEEeCCCcEEEEcCCCCCCCC--------ccCCccCCCCCCCCCeEEEEecCCCCcEEEEEeCC
Q 046451 124 GPVRGLEFNSFTPNLLASGADDGEICIWDLSAPAEPS--------HFPPLRGNGSAAQGEISFVSWNSKVQHILASTSYN 195 (719)
Q Consensus 124 ~~V~~l~fsp~~~~~lasgs~dg~I~iwdl~~~~~~~--------~~~~l~~~~~~h~~~I~~l~~sp~g~~~l~s~s~d 195 (719)
..|..|+. +..+.+.-..||.|+.|-......+- ...+... .....|..|+... ...+.-..|
T Consensus 59 ~~i~~va~---G~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v---~l~~~i~~va~G~---~hs~alt~~ 129 (413)
T 1a12_A 59 EDVVQAEA---GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV---ELQEKVVQVSAGD---SHTAALTDD 129 (413)
T ss_dssp SCEEEEEE---CSSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEEC---CCCSCEEEEEECS---SEEEEEETT
T ss_pred CCeEEEEe---CCCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEe---cCCCcEEEEecCC---CeEEEEcCC
Confidence 56667666 44666777889999999765432211 0000000 1123677776543 345556789
Q ss_pred CcEEEEEC--CC-Cce-----------eEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCce----
Q 046451 196 GTTVVWDL--KK-QKP-----------VISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPV---- 257 (719)
Q Consensus 196 g~I~iwd~--~~-~~~-----------~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~---- 257 (719)
|.|+.|-. .. ++. ...+ .....|..|+.-.+ ..+.-..++ .|+.|-......+-
T Consensus 130 G~v~~wG~~~n~~GqlG~~~~~~~~~~P~~v--~~~~~i~~ia~G~~---hs~alt~~G---~v~~wG~n~~GqLG~~~~ 201 (413)
T 1a12_A 130 GRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV--QLDVPVVKVASGND---HLVMLTADG---DLYTLGCGEQGQLGRVPE 201 (413)
T ss_dssp SCEEEEECEEETTEEEESSBBTBCEEEEEEE--CCSSCEEEEEECSS---EEEEEETTS---CEEEEECCTTSTTCSCGG
T ss_pred CcEEEeeCCcCCCCccCcCCccccccCCEEe--cCCCCEEEEEecCc---eEEEEcCCC---CEEEeeCCCCCccCCCcc
Confidence 99999975 21 110 0111 12345666665433 334444555 78888654321110
Q ss_pred -----------------EEeeC------CCCCeeEEEeCCCCCCeEEEEeCCCcEEEEECCCC-e----------EEEEe
Q 046451 258 -----------------KEFVG------HTKGVIAMSWCPNDSSYLLTCAKDNRTICWDTVSG-E----------IVSEL 303 (719)
Q Consensus 258 -----------------~~~~~------h~~~V~~v~~sp~d~~~l~sgs~Dg~I~iwd~~~~-~----------~~~~l 303 (719)
..+.. ....|..|+.. ..+.+.-..||.|+.|-.... + .-..+
T Consensus 202 ~~~~~~~~~~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G---~~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v 278 (413)
T 1a12_A 202 LFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCG---AYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNL 278 (413)
T ss_dssp GTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEE---TTEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEEC
T ss_pred ccccccccccccccccCceEeeccccccCCccEEEEEeC---CCEEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEc
Confidence 00110 22456666654 345556678999999966431 1 11111
Q ss_pred c---CCCCCeEEeEEcCCCCCEEEEEeCCCcEEEEeCCCCcccccCCCCCCCCCccCcceec-----------CCCceee
Q 046451 304 P---AGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGDSNFSAAPLRAPKWYK-----------RPAGASF 369 (719)
Q Consensus 304 ~---~h~~~v~~l~~spdg~~~las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~p~w~~-----------~~~~~s~ 369 (719)
. .....|..|+... ...+.-..||.|+.|-......+..+..... ...|.... ....++.
T Consensus 279 ~~l~~~~~~v~~ia~G~---~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~---~~~P~~v~~l~~v~~v~~G~~hs~al 352 (413)
T 1a12_A 279 TSFKNSTKSWVGFSGGQ---HHTVCMDSEGKAYSLGRAEYGRLGLGEGAEE---KSIPTLISRLPAVSSVACGASVGYAV 352 (413)
T ss_dssp GGGCCTTCCEEEEEECS---SEEEEEETTSCEEEEECCGGGTTCSCTTCCC---EEEEEECCSSSSEEEEEECSSEEEEE
T ss_pred hhccCCCceEEEEeccc---ceEEEEeCCCCEEEeeCCCCCccCCCCCCcc---ccCCEEecccCceeEEEECcceEEEE
Confidence 1 1112366665543 3444455789999998765444433211100 01111110 1123455
Q ss_pred eeCCcEEEEccCCC
Q 046451 370 GFGGKLVSFHPKSS 383 (719)
Q Consensus 370 s~~Gklv~~~~~~~ 383 (719)
..+|++++|+.+..
T Consensus 353 t~~G~v~~wG~n~~ 366 (413)
T 1a12_A 353 TKDGRVFAWGMGTN 366 (413)
T ss_dssp ETTSCEEEEECCTT
T ss_pred eCCCCEEEecCCCC
Confidence 67899999987654
No 416
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=27.91 E-value=2e+02 Score=31.42 Aligned_cols=65 Identities=12% Similarity=0.059 Sum_probs=44.3
Q ss_pred CeEEEEecCCCCcEEEEEeC------------CCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEEeCCC
Q 046451 175 EISFVSWNSKVQHILASTSY------------NGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVASDED 240 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~------------dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~ 240 (719)
....|.|+++|. +.++... ...|..++..+++....+.......++.++|+||++.+++....-+
T Consensus 477 sPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 477 SPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPG 553 (592)
T ss_dssp CEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEESTT
T ss_pred CCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeCCC
Confidence 567899999974 5542221 1257777777777655554234567999999999987777776655
No 417
>2knj_A Microplusin preprotein; antimicrobial peptide, rhipicephalus (boophilus) microplus, antimicrobial protein; NMR {Rhipicephalus microplus}
Probab=27.71 E-value=48 Score=26.22 Aligned_cols=54 Identities=9% Similarity=0.263 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhCCCCCCccchhhhhhHHHHHHH-----HHHHHccCC-C--------CHHHHHHHHHHHHH
Q 046451 617 TLTRLFNETSEALGGSRANPAKKREIEDNSRKIGA-----LFAKLNSGD-I--------SKNAADKLVQLCQA 675 (719)
Q Consensus 617 ~l~~~~~~~~~~~~~~~~~~~~k~~~~d~~krl~~-----l~~~l~~~~-l--------s~~~~~~l~~l~~~ 675 (719)
.|++.++=++ ..++..++++++.+.++|+. .+.||.++. | ++.-++.+++|+..
T Consensus 12 eL~~~l~Cvr-----~~a~~~l~~kLd~v~~~L~C~~d~C~vrKLC~~~dl~~~L~~~Ft~~e~~e~h~la~~ 79 (90)
T 2knj_A 12 ALVTELECIR-----LRISPETNAAFDNAVQQLNCLNRACAYRKMCATNNLEQAMSVYFTNEQIKEIHDAATA 79 (90)
T ss_dssp HHHHHHHHHH-----TCCSSTHHHHHHHHHHHHTCSSHHHHHHHHHHHCSTHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-----HhCCHHHHHHHHHHHHHcCCCcchhHHHHHHcCCCHhHHHHHHCCHHHHHHHHHHHHh
Confidence 4777777677 88889999999999999874 445554432 4 33445555555543
No 418
>3d9j_A RNA-binding protein 16; SCAF8, RNA polymerase II CTD interacting domain, arm repeats phospho-CTD, phosphoprotein, transcription; 1.60A {Homo sapiens} PDB: 3d9k_A* 3d9l_A* 3d9m_A* 3d9n_A* 3d9p_A* 3d9i_A 3d9o_A* 2diw_A
Probab=27.41 E-value=92 Score=27.13 Aligned_cols=34 Identities=15% Similarity=0.235 Sum_probs=28.8
Q ss_pred hhhHHHHHHHHHHHHccCC-CCHHHHHHHHHHHHH
Q 046451 642 IEDNSRKIGALFAKLNSGD-ISKNAADKLVQLCQA 675 (719)
Q Consensus 642 ~~d~~krl~~l~~~l~~~~-ls~~~~~~l~~l~~~ 675 (719)
.++..++|.-|++-|.++. .++.++++|.+....
T Consensus 103 ~~~~r~kl~rLl~iW~~r~vF~~~~l~~l~~~l~~ 137 (145)
T 3d9j_A 103 PGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAA 137 (145)
T ss_dssp CGGGHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcC
Confidence 3778899999999999877 899999998877653
No 419
>2rjz_A PILO protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Pseudomonas aeruginosa}
Probab=26.43 E-value=37 Score=29.83 Aligned_cols=55 Identities=16% Similarity=0.209 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhCCCCCCccchhhhhhHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Q 046451 618 LTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQA 675 (719)
Q Consensus 618 l~~~~~~~~~~~~~~~~~~~~k~~~~d~~krl~~l~~~l~~~~ls~~~~~~l~~l~~~ 675 (719)
|++.|+.-..+ ++.-++.|++++++++||+.|-..|=+.+==+..++.+.+++..
T Consensus 3 L~~~~~~k~~~---aa~L~~l~~ql~~l~~~l~~l~~~LP~~~em~~LL~~i~~~~~~ 57 (147)
T 2rjz_A 3 LKQQFSTKAFQ---AANLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLG 57 (147)
T ss_dssp HHHHHHHTGGG---CSSHHHHHHHHHHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHh
Confidence 66666665544 66677889999999999999999996555333455555555543
No 420
>2dyo_B Autophagy protein 16; ubiquitin-fold, herix-bundle, protein turnover/protein turnover complex; 1.97A {Saccharomyces cerevisiae} PDB: 2dym_B
Probab=26.36 E-value=15 Score=25.44 Aligned_cols=13 Identities=23% Similarity=0.542 Sum_probs=11.5
Q ss_pred hhHHHHHHHHHHH
Q 046451 643 EDNSRKIGALFAK 655 (719)
Q Consensus 643 ~d~~krl~~l~~~ 655 (719)
|++++|+..||.-
T Consensus 36 D~vE~rF~eLFe~ 48 (57)
T 2dyo_B 36 NDKEAHLNELFQD 48 (57)
T ss_dssp HHHHHTTGGGCCT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999864
No 421
>4ftd_A Uncharacterized protein; 6-bladed-beta-propeller, immunoglobulin-like, carbohydrate metabolism, structural genomics; 1.91A {Bacteroides eggerthii}
Probab=25.97 E-value=5.8e+02 Score=26.61 Aligned_cols=214 Identities=12% Similarity=0.073 Sum_probs=0.0
Q ss_pred eeeeecCCCCCCCCCccceEEEEcCCCcEEEEc-CCccccCCCCCCCCceeeeccccCC--EEEEEEeCCCCCEEEE---
Q 046451 68 NRLAWGKNGSGSEDFSLGLVAGGLVDGSIDIWN-PLSLISSGETGGNPLIAHLSRHKGP--VRGLEFNSFTPNLLAS--- 141 (719)
Q Consensus 68 ~~l~~sp~g~~~~~~~~~~lasgs~dg~I~lwd-~~~~~~~~~~~~~~~~~~l~~h~~~--V~~l~fsp~~~~~las--- 141 (719)
.+..|..+ ..++....+..+..|| +.+......+..........+-.+. ..++.-.. +++.+++
T Consensus 139 rG~~~~s~---------~V~v~~r~~~~v~~~dHll~~~~~~ag~~~~~~l~~TGvsGgtf~~~m~a~~-~G~Iy~anLs 208 (453)
T 4ftd_A 139 RCASYDGE---------HVLVVSRPTTPNFHTPHLLKVSDLKRGEIKPIMLDVTGVKGGTYDYNMGALI-NGHVYLSSLS 208 (453)
T ss_dssp EEEEECSS---------EEEEEECCCTTTCCCSEEEEHHHHHTTCCCCEECCCTTCCCSSEEEEEEEEE-TTEEEEEEEB
T ss_pred cccccCCc---------eEEEEecCCceEEecccccchhhcccCcccccccccceeeccceEEEEEEec-CCCEEEEecc
Q ss_pred EeCCCcEEEEcCCCCCCCC----ccCCccCCCCCCC-CCeEEEEecCCCCcEEEEEeCCC-cEEEEECCCCce-------
Q 046451 142 GADDGEICIWDLSAPAEPS----HFPPLRGNGSAAQ-GEISFVSWNSKVQHILASTSYNG-TTVVWDLKKQKP------- 208 (719)
Q Consensus 142 gs~dg~I~iwdl~~~~~~~----~~~~l~~~~~~h~-~~I~~l~~sp~g~~~l~s~s~dg-~I~iwd~~~~~~------- 208 (719)
+...+.++||...+....- .+..-.....+.+ +.-.++.-+.++.-+|..+.... .+..|.+..+..
T Consensus 209 g~~gs~fkIYrW~~~ts~Pe~i~s~~v~~~~gTg~R~Gd~isv~GD~~gNa~I~~~~n~s~~~~rwtVtng~l~~~~~~~ 288 (453)
T 4ftd_A 209 GGKVSPFKIYYWETPTSNPEVIANINVGNIPGAGNRHGDNASYNIDENGNGFIFFGDNAATEFLKVPISGHKTVDIGNIK 288 (453)
T ss_dssp CSTTSCEEEEEESSTTSCCEEEEEECGGGSTTCCSCBCSCCEEEECTTSCEEEEEEBTTSSEEEEEEEETTTEECGGGCE
T ss_pred CCCCCceEEEEeCCCCCCceeEEEeccccCCcccccccceEEEEEcCCCCEEEEECCCCceeEEEEEEECCeEcCCCCce
Q ss_pred eEEecCCCCCceeEEEECCCCCcEEEEEeCCCCCCcEEEEecCCCCCceEEeeCCCCCeeEEEeCCCCCCeEEEEe----
Q 046451 209 VISFSESIKRRCSVLQWNPDVATQLVVASDEDSSPALRLWDMRNTMSPVKEFVGHTKGVIAMSWCPNDSSYLLTCA---- 284 (719)
Q Consensus 209 ~~~~~~~~~~~i~~l~~sp~g~~~l~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~~~V~~v~~sp~d~~~l~sgs---- 284 (719)
+.... ........+.+--+-..++..+..- ...+++..........+........-+.|+ ..++|+.++
T Consensus 289 v~~~~-~~g~~~~~v~~~gnT~~y~~sg~~~----p~~Ly~~~g~~~~~sai~~~a~~~~vv~FN--~~rYLi~~~~~~~ 361 (453)
T 4ftd_A 289 VLPSK-SDATMVTNVYRVGDTDQYLWSGIRV----PVTLVDESLGEKYKSKIAGEAVAPKVVTFN--EERYLLVCTAGQG 361 (453)
T ss_dssp EEECC-GGGCSSEEEEECTTSSCEEEEETTE----EEEEECTTCCEEEECSCCTTEEEEEEEEET--TEEEEEEEECCBS
T ss_pred eeccC-CCceeeeeeEEcCcccceeeccccC----ceeEEecCCCEEEeeeccccCCCcceEEEc--cccEEEEEEeccc
Q ss_pred ----CCCcEEEEECCCCe
Q 046451 285 ----KDNRTICWDTVSGE 298 (719)
Q Consensus 285 ----~Dg~I~iwd~~~~~ 298 (719)
.+..|+|||+.++.
T Consensus 362 g~~~~~~~l~vYDIS~g~ 379 (453)
T 4ftd_A 362 AASKASIALEVYDLTKGE 379 (453)
T ss_dssp TTCCCCCEEEEEECCSSS
T ss_pred CccCCCceEEEEECCCCc
No 422
>1q1s_A Large T antigen; importin alpha/karyopherin alpha, nuclear localisation sequence (NLS) recognition, phosphorylation; 2.30A {Synthetic} PDB: 1q1t_A
Probab=25.94 E-value=16 Score=21.23 Aligned_cols=13 Identities=46% Similarity=0.703 Sum_probs=10.2
Q ss_pred CCCCccchhhhhh
Q 046451 632 SRANPAKKREIED 644 (719)
Q Consensus 632 ~~~~~~~k~~~~d 644 (719)
..++|+.||+++|
T Consensus 13 ~sTPPKkKrk~~d 25 (26)
T 1q1s_A 13 HAAPPKKKRKVEX 25 (26)
T ss_pred ccCCCccccccCC
Confidence 4678888888876
No 423
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=25.63 E-value=2.3e+02 Score=30.89 Aligned_cols=64 Identities=14% Similarity=0.180 Sum_probs=43.2
Q ss_pred CeeEEEeCCCCCCeEEEEeC------------CCcEEEEECCCCeEEEEecCC-CCCeEEeEEcCCCCCEEEEEeCCC
Q 046451 266 GVIAMSWCPNDSSYLLTCAK------------DNRTICWDTVSGEIVSELPAG-TNWNFDIHWYPKIPGVISASSFDG 330 (719)
Q Consensus 266 ~V~~v~~sp~d~~~l~sgs~------------Dg~I~iwd~~~~~~~~~l~~h-~~~v~~l~~spdg~~~las~s~Dg 330 (719)
....|.|.+ +|.+.++... .+.|..++..+++....+... ...++.++|+||+..++++.-.-|
T Consensus 477 sPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPG 553 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEESTT
T ss_pred CCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeCCC
Confidence 456789998 7776663321 226777888888876666543 346899999999965666654444
No 424
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=24.99 E-value=7e+02 Score=27.20 Aligned_cols=158 Identities=15% Similarity=0.139 Sum_probs=89.1
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEEECCCCceeEEecCCCCCceeEEEECCCCCcEEEEE-eCCCC-CCcEEEEecCC
Q 046451 175 EISFVSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSESIKRRCSVLQWNPDVATQLVVA-SDEDS-SPALRLWDMRN 252 (719)
Q Consensus 175 ~I~~l~~sp~g~~~l~s~s~dg~I~iwd~~~~~~~~~~~~~~~~~i~~l~~sp~g~~~l~~~-s~d~~-~~~I~lwDl~~ 252 (719)
.+....+.-+|...|+.++ .++| ..++.+......|...+..-.|.|+..-+.+.. ..++. ..-..++|.++
T Consensus 331 ~~svaDVDGDG~dEIv~Gs-----~~iD-~dG~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~t 404 (620)
T 2zuy_A 331 SLSVADVDGDGKDEIIYGA-----MAVD-HDGTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAGT 404 (620)
T ss_dssp SCEEECCSSSSSCEEEETT-----EEEC-TTSSEEEECSCCCCSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETTT
T ss_pred CceEEecCCCCceeEEEee-----eEEC-CCCCEEeecCCCCCceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECCC
Confidence 3445556667766676654 2444 345555555557888888888999865554443 33311 12467889887
Q ss_pred CCCceEEeeC--CCCCeeEEEeCCCCC-CeEEEEeC---CC-cEEEEECCCCeEEEEecCCCCCeEEeEEcCCCCCEEEE
Q 046451 253 TMSPVKEFVG--HTKGVIAMSWCPNDS-SYLLTCAK---DN-RTICWDTVSGEIVSELPAGTNWNFDIHWYPKIPGVISA 325 (719)
Q Consensus 253 ~~~~~~~~~~--h~~~V~~v~~sp~d~-~~l~sgs~---Dg-~I~iwd~~~~~~~~~l~~h~~~v~~l~~spdg~~~las 325 (719)
+ +.+..... +.+....-.|.|... --+.+... ++ .-.||+. +|+.+.... ....-+.+-|.-|...-|+-
T Consensus 405 G-~vlw~~~~~~D~Gr~~~~Didp~~pG~E~w~~~~~~~~~~~~~l~~~-~G~~i~~~~-p~~~N~~i~WdGDl~re~ld 481 (620)
T 2zuy_A 405 G-EILWGVHAGTDVGRGMAAHIDPSYKGSLVWGIDPPGNDGMSYGLFTS-KGEKISDKA-PSSANFAIWWDGDLVRELLD 481 (620)
T ss_dssp C-CEEEEECCSSCCCEEEEECCCTTSSSCEEEEECCTTSCCCEEEEEET-TCCEEESSC-CSCCSEEECCSSSSSCEEEE
T ss_pred C-cEEEEecCcccCCceEEEecCCCCCceEEEEecccccccCCCceECC-CCCCccCCC-CCCcceEEEECCCccHhhhC
Confidence 6 44544432 334444445665222 22333221 11 2358886 667665321 11234567888887667776
Q ss_pred EeCC-----CcEEEEeCCCCc
Q 046451 326 SSFD-----GKIGIYNIEGCS 341 (719)
Q Consensus 326 ~s~D-----g~I~iwd~~~~~ 341 (719)
++.+ +.|.=|+..+++
T Consensus 482 ~~~~~~~~~~~i~k~~~~~~~ 502 (620)
T 2zuy_A 482 HDWDGTIGRPKIEKWDAENGC 502 (620)
T ss_dssp EEECSSCEEEEEEEEETTTTE
T ss_pred CccccccCCceEEeccCCCCc
Confidence 6555 567778876664
No 425
>2lp4_A Chemotaxis protein CHEA; two component signaling system, histidine phosphotransfer DO response regulator; NMR {Escherichia coli}
Probab=24.21 E-value=88 Score=29.51 Aligned_cols=37 Identities=5% Similarity=0.273 Sum_probs=28.0
Q ss_pred hhhhhHHHHHHHHHHHHccCC--CCHHHHHHHHHHHHHH
Q 046451 640 REIEDNSRKIGALFAKLNSGD--ISKNAADKLVQLCQAL 676 (719)
Q Consensus 640 ~~~~d~~krl~~l~~~l~~~~--ls~~~~~~l~~l~~~~ 676 (719)
..+.++..+|+-|||++++|+ +++.+++-|.+-...|
T Consensus 60 ~~i~~laH~~E~~l~~~r~g~~~~~~~~~~ll~~~~D~l 98 (225)
T 2lp4_A 60 TILQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIM 98 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHH
Confidence 456788889999999999998 6887776665544433
No 426
>4gof_A Small glutamine-rich tetratricopeptide repeat-CON protein alpha; four-helix bundle, protein-protein interaction, UBL4A ubiqui domain; 1.35A {Homo sapiens} PDB: 4goe_A 4god_A
Probab=23.77 E-value=95 Score=21.82 Aligned_cols=29 Identities=31% Similarity=0.428 Sum_probs=25.6
Q ss_pred HHHHHHHHccCCCCHHHHHHHHHHHHHHh
Q 046451 649 IGALFAKLNSGDISKNAADKLVQLCQALD 677 (719)
Q Consensus 649 l~~l~~~l~~~~ls~~~~~~l~~l~~~~~ 677 (719)
++.|-+.+.+|+||++-.+.|.--.+||+
T Consensus 10 i~FL~~~~~~~~~s~D~~ESleVAiqCi~ 38 (52)
T 4gof_A 10 IQFLHDQLRHGGLSSDAQESLEVAIQCLE 38 (52)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCcCHhHHHHHHHHHHHHH
Confidence 56788888999999999999999889885
No 427
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=23.36 E-value=55 Score=31.59 Aligned_cols=40 Identities=15% Similarity=0.101 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhCCCCCCccchhhhhhHHHHHHHHHHHHccCCC
Q 046451 617 TLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALFAKLNSGDI 661 (719)
Q Consensus 617 ~l~~~~~~~~~~~~~~~~~~~~k~~~~d~~krl~~l~~~l~~~~l 661 (719)
.+..+++||...+.+ .-...|.||+.+|||||- ..+..++
T Consensus 199 ~~~~E~~Rl~~~l~~----~~~~~k~d~~~~r~NIL~-~F~~~~~ 238 (248)
T 2c0g_A 199 FLEEETKRLLRLKAG----KVTEAKKEELLRKLNILE-VFRVHKV 238 (248)
T ss_dssp HHHHHHHHHHHHHTS----SCCHHHHHHHHHHHHHHH-HTCCSSC
T ss_pred HHHHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHH-HHHhccC
Confidence 455666666655521 222345577788888766 4444443
No 428
>3us6_A Histidine-containing phosphotransfer protein type MTHPT1; helix bundle, plant hormone signal transduction, cytokinin S transduction; 1.45A {Medicago truncatula}
Probab=23.12 E-value=2.3e+02 Score=24.74 Aligned_cols=46 Identities=13% Similarity=0.299 Sum_probs=29.8
Q ss_pred hhhHHHHHHHHHHHHccCCCCHHHH----------------HHHHHHHHHH----hcCChhHHHhh
Q 046451 642 IEDNSRKIGALFAKLNSGDISKNAA----------------DKLVQLCQAL----DNNDFGTALQI 687 (719)
Q Consensus 642 ~~d~~krl~~l~~~l~~~~ls~~~~----------------~~l~~l~~~~----~~~~~~~a~~i 687 (719)
++|+.++|+.|-..++++...-..+ .+|.++|..| ++++.+.+..+
T Consensus 50 l~d~~~~l~~L~~al~~~~~D~~~l~~~aH~LKGss~~lGa~~l~~~c~~lE~~~~~~~~~~~~~~ 115 (153)
T 3us6_A 50 FDDSERILKDLSFAVDQQSIDFKKVDAHVHQFKGSSASIGAQRVKNSCVAFRNFCEEQNIDACRRC 115 (153)
T ss_dssp HHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 4789999999999998873322222 4566666666 44666555444
No 429
>2d4u_A Methyl-accepting chemotaxis protein I; helix-turn-helix, signaling protein; 1.95A {Escherichia coli} PDB: 3atp_A
Probab=22.71 E-value=1.3e+02 Score=26.31 Aligned_cols=23 Identities=17% Similarity=0.241 Sum_probs=18.2
Q ss_pred HHHHHHHHHHhcCChhHHHhhee
Q 046451 667 DKLVQLCQALDNNDFGTALQIQV 689 (719)
Q Consensus 667 ~~l~~l~~~~~~~~~~~a~~i~~ 689 (719)
..|..+.++|++||++++.++-.
T Consensus 114 ~~l~~~~~~l~~g~~~~~~~~~~ 136 (176)
T 2d4u_A 114 NALAELIQLLGAGKINEFFDQPT 136 (176)
T ss_dssp HHHHHHHHHHHHTCHHHHHHCCH
T ss_pred HHHHHHHHHHHCCCHHHHHhccc
Confidence 45777888899999999987543
No 430
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=22.32 E-value=51 Score=33.56 Aligned_cols=45 Identities=18% Similarity=0.117 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhcCChhHHHhheeeeec---CCcccchhHHHHHHHHHhc
Q 046451 667 DKLVQLCQALDNNDFGTALQIQVLLTT---SDWDECNFWLATLKRMIKT 712 (719)
Q Consensus 667 ~~l~~l~~~~~~~~~~~a~~i~~~l~~---~~~~e~~~w~~g~k~li~~ 712 (719)
+.+.+|.+++++||+++|.++|..|.. --+.+ ++|..++|..+.+
T Consensus 246 ~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~~~~-~~~~~~iK~al~~ 293 (343)
T 2v9d_A 246 QVSVNLLKAWRDGDVAKAAGYHQTLLQIPQMYQLD-TPFVNVIKEAIVL 293 (343)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHGGGGGGGS-SSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHH
Confidence 567888899999999999999984422 12223 3468899987764
No 431
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=21.79 E-value=1.2e+02 Score=30.43 Aligned_cols=74 Identities=16% Similarity=0.225 Sum_probs=46.6
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCccc-hhhhhhHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHhcCChhHHHhhee
Q 046451 612 KPVINTLTRLFNETSEALGGSRANPAK-KREIEDNSRKIGALFAKLNSGDISKNAADKLVQLCQALDNNDFGTALQIQV 689 (719)
Q Consensus 612 ~~~~~~l~~~~~~~~~~~~~~~~~~~~-k~~~~d~~krl~~l~~~l~~~~ls~~~~~~l~~l~~~~~~~~~~~a~~i~~ 689 (719)
..++..|++.+..+.+. . ...+. ++-.||++|.|..+-+.|....=+++..+...+|++++-+.|.-.-+-.|.
T Consensus 13 ~elVr~l~d~l~~l~~~---~-~~~~~~~k~~ee~sK~l~~mK~iL~G~~e~ep~~e~~~qL~~ei~~~dll~~Li~~l 87 (341)
T 1upk_A 13 ADIVKNLKESMAVLEKQ---D-ISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSGLLSTLVADL 87 (341)
T ss_dssp HHHHHHHHHHHHHHHC-------CTHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHSHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHhcc---c-cccchhhHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 45677788888877611 1 11122 344599999999999999855555667777889999987777655554444
No 432
>2lch_A Protein OR38; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Thermotoga maritima}
Probab=21.79 E-value=1.3e+02 Score=24.59 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=26.5
Q ss_pred hhhhHHHHHHHHHHHHccCC--CCHHHHHHHHHHHHHH
Q 046451 641 EIEDNSRKIGALFAKLNSGD--ISKNAADKLVQLCQAL 676 (719)
Q Consensus 641 ~~~d~~krl~~l~~~l~~~~--ls~~~~~~l~~l~~~~ 676 (719)
.+.++..+++-+++.+++|+ +++.+++.|.+-...|
T Consensus 60 ~l~~lah~~E~~l~~~r~~~~~~~~~l~~~l~~~~d~l 97 (113)
T 2lch_A 60 SVAKVLHTIMNLVDKMLNSEIKITSDLIDKVKKKLDMV 97 (113)
T ss_dssp HHHHHHHHHHHHHHHHTSTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 35667778899999999997 6777777666655444
No 433
>2jqq_A Conserved oligomeric golgi complex subunit 2; protein, helical bundle, vesicular transport, tethering, protein transport; NMR {Saccharomyces cerevisiae}
Probab=20.60 E-value=1.2e+02 Score=27.51 Aligned_cols=72 Identities=11% Similarity=0.208 Sum_probs=41.0
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHHHHhCCCCCCccchhhhhhH---HHHHHHHHHHHccCC-CCHHHHHHHHHHHHHH
Q 046451 602 VDTSNVPAHQKPVINTLTRLFNETSEALGGSRANPAKKREIEDN---SRKIGALFAKLNSGD-ISKNAADKLVQLCQAL 676 (719)
Q Consensus 602 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~k~~~~d~---~krl~~l~~~l~~~~-ls~~~~~~l~~l~~~~ 676 (719)
++.+.+-.+++.+..-|..-+..|.+-|. ..=+.++.+++|+ -|+|+.||..|++-. |+. ..+-..+|++.|
T Consensus 40 ~~n~E~l~eLQ~v~~Dl~~F~~QL~qL~~--~~i~~Tre~v~d~l~YLkkLD~l~~~Lq~h~~Lse-~l~l~kqLs~sL 115 (204)
T 2jqq_A 40 DEENETLINLEKTQSDLQKFMTQLDHLIK--DDISNTQEIIKDVLEYLKKLDEIYGSLRNHSQLTE-ALSLGKRLSKSL 115 (204)
T ss_dssp -----------CHHHHHHHHHHHHHHHHH--HSCSTTHHHHHHHHHHHHHHHHHHHTCSSSSHHHH-HHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHH
Confidence 45556666677777777777777766553 2334456667776 589999999999988 654 444445555544
No 434
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=20.52 E-value=44 Score=33.61 Aligned_cols=43 Identities=12% Similarity=0.184 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhcCChhHHHhheeeeecCCcccchhHHHHHHHHH
Q 046451 667 DKLVQLCQALDNNDFGTALQIQVLLTTSDWDECNFWLATLKRMI 710 (719)
Q Consensus 667 ~~l~~l~~~~~~~~~~~a~~i~~~l~~~~~~e~~~w~~g~k~li 710 (719)
+.+.+|.+++++||+++|.++|..|..-..- +.....++|..+
T Consensus 227 ~~~~~l~~a~~~Gd~~~A~~l~~~l~~~~~~-~~~~~~~~K~al 269 (318)
T 3qfe_A 227 KTVSKIYELYKAGKVDQAMELHRKAALAESP-CKSGIATTKYAA 269 (318)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTCC-C--CHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-HhcCCHHHHHHH
Confidence 6788899999999999999999955422211 344567888864
No 435
>3mit_A Lectin; all beta sheet protein, beta prism-I fold, mannose specific, binding protein; HET: MAN; 2.32A {Musa acuminata} SCOP: b.77.3.0 PDB: 1x1v_A* 3miu_A* 3miv_A 2bmz_A* 2bmy_A* 2bn0_A*
Probab=20.28 E-value=3.2e+02 Score=23.37 Aligned_cols=84 Identities=11% Similarity=0.010 Sum_probs=42.4
Q ss_pred EECCCCceeEEecCCCCCceeEE--EECCCCCcEE-EEEeCCCCCCcEEEEecCCCCCceEEeeCCC------CCeeEEE
Q 046451 201 WDLKKQKPVISFSESIKRRCSVL--QWNPDVATQL-VVASDEDSSPALRLWDMRNTMSPVKEFVGHT------KGVIAMS 271 (719)
Q Consensus 201 wd~~~~~~~~~~~~~~~~~i~~l--~~sp~g~~~l-~~~s~d~~~~~I~lwDl~~~~~~~~~~~~h~------~~V~~v~ 271 (719)
||......+..+...+...|.+| .|.-+..... .-++..+ ....+.+.. .+.+..+.++. ..|.+|.
T Consensus 18 ~d~~~~~~v~~I~V~~g~~I~~I~~~f~y~~~~~~~~~Gg~gG---~~~~~~l~~-~E~it~v~g~~g~~~~~~~I~sL~ 93 (141)
T 3mit_A 18 FDMGPAYRIISVKIFSGDVVDAVDVTFTYYGKTETRHFGGSGG---TPHEIVLQE-GEYLVGMKGEFGNYHGVVVVGKLG 93 (141)
T ss_dssp EEEEECSEEEEEEEEESSSEEEEEEEEEETTEEEEEEEECSCS---EEEEEECCT-TCCEEEEEEEEEEETTEEEEEEEE
T ss_pred ccCCCCCcEEEEEEEeCCeEeEEEEEEEEeCCCceeccCCCCC---ceeEEEECC-CCcEEEEEEEEcCcCCceEEEEEE
Confidence 45333334444433344567777 7765432111 3344333 556666663 35555555433 3677777
Q ss_pred eCCCCCCeEEEEeCCCc
Q 046451 272 WCPNDSSYLLTCAKDNR 288 (719)
Q Consensus 272 ~sp~d~~~l~sgs~Dg~ 288 (719)
|.-+.+++...|..+++
T Consensus 94 f~Tn~g~~~~~G~~~G~ 110 (141)
T 3mit_A 94 FSTNKKSYGPFGNTGGT 110 (141)
T ss_dssp EEESSCEEEEECSCCCE
T ss_pred EEeCCCceeCcccCCCc
Confidence 77644444444544543
No 436
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=20.03 E-value=47 Score=33.41 Aligned_cols=46 Identities=20% Similarity=0.167 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhcCChhHHHhheeeeec----CCcccchhHHHHHHHHHhc
Q 046451 667 DKLVQLCQALDNNDFGTALQIQVLLTT----SDWDECNFWLATLKRMIKT 712 (719)
Q Consensus 667 ~~l~~l~~~~~~~~~~~a~~i~~~l~~----~~~~e~~~w~~g~k~li~~ 712 (719)
+.+.+|.+++++||+++|.++|..|.. ...-....+..++|.++.+
T Consensus 221 ~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~~~~~~~~~~~~~K~al~~ 270 (316)
T 3e96_A 221 QKAVEMLEALRNNDNDAVWRIWEDIVPFEDLRGKYNQGNNVVVIKEAMEM 270 (316)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTTTTTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHHHhccCccHHHHHHHHHH
Confidence 556788999999999999999985531 0011124577889998765
Done!