Query 046453
Match_columns 225
No_of_seqs 150 out of 380
Neff 6.6
Searched_HMMs 13730
Date Mon Mar 25 21:39:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046453.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046453hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2cvda1 a.45.1.1 (A:76-199) Cl 50.3 5.6 0.00041 26.6 3.1 27 43-69 95-121 (124)
2 d1tw9a1 a.45.1.1 (A:78-206) Cl 36.5 15 0.0011 24.5 3.6 27 43-69 100-126 (129)
3 d2gsqa1 a.45.1.1 (A:76-202) Cl 35.6 14 0.00099 24.5 3.2 27 43-69 98-124 (127)
4 d1m0ua1 a.45.1.1 (A:123-249) C 32.0 16 0.0012 24.5 3.1 27 43-69 98-124 (127)
5 d1okta1 a.45.1.1 (A:86-211) Pf 29.8 19 0.0014 24.2 3.2 26 44-69 98-123 (126)
6 d1gula1 a.45.1.1 (A:81-220) Cl 15.1 68 0.005 21.4 3.6 30 43-72 97-126 (140)
7 d1nexa1 a.157.1.1 (A:116-185) 13.8 39 0.0028 21.1 1.7 16 205-220 45-60 (70)
8 d1ou8a_ b.136.1.1 (A:) Stringe 12.1 38 0.0028 23.2 1.3 16 87-102 9-24 (106)
9 d1v29a_ d.149.1.1 (A:) Cobalt- 12.1 85 0.0062 23.8 3.5 65 2-66 4-72 (203)
10 d1mtyg_ a.23.3.1 (G:) Methane 12.1 38 0.0028 24.6 1.4 25 195-219 136-160 (162)
No 1
>d2cvda1 a.45.1.1 (A:76-199) Class sigma GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.26 E-value=5.6 Score=26.64 Aligned_cols=27 Identities=15% Similarity=0.369 Sum_probs=24.2
Q ss_pred CchhHHHHHHHHhCCHHHHHHHhcCCC
Q 046453 43 GRPAFESVLQRMKRSPEGRAVLLERPR 69 (225)
Q Consensus 43 ~~~a~~~~~~~m~~~p~g~~ll~erp~ 69 (225)
.-+.+.+..++|.+.|..++.|++||.
T Consensus 95 ~~P~L~~~~~rv~~~P~vk~yl~~rp~ 121 (124)
T d2cvda1 95 NHPRLVTLRKKVQAIPAVANWIKRRPQ 121 (124)
T ss_dssp TCHHHHHHHHHHHTSHHHHHHHHHSCC
T ss_pred hhHHHHHHHHHHHhCHHHHHHHHHCcC
Confidence 457799999999999999999999984
No 2
>d1tw9a1 a.45.1.1 (A:78-206) Class sigma GST {Heligmosomoides polygyrus [TaxId: 6339]}
Probab=36.54 E-value=15 Score=24.45 Aligned_cols=27 Identities=22% Similarity=0.537 Sum_probs=24.3
Q ss_pred CchhHHHHHHHHhCCHHHHHHHhcCCC
Q 046453 43 GRPAFESVLQRMKRSPEGRAVLLERPR 69 (225)
Q Consensus 43 ~~~a~~~~~~~m~~~p~g~~ll~erp~ 69 (225)
+-+.+...+++|.+.|..++.++.||.
T Consensus 100 ~~P~L~~~~~rv~~~P~ik~yl~~rp~ 126 (129)
T d1tw9a1 100 GFPEVKAHMERIQQTPRIKKWIETRPE 126 (129)
T ss_dssp TCHHHHHHHHHHHTSHHHHHHHHHSCC
T ss_pred cChHHHHHHHHHHcCHHHHHHHHHCcC
Confidence 457889999999999999999999985
No 3
>d2gsqa1 a.45.1.1 (A:76-202) Class sigma GST {Squid (Ommastrephes sloani pacificus) [TaxId: 6634]}
Probab=35.63 E-value=14 Score=24.47 Aligned_cols=27 Identities=26% Similarity=0.386 Sum_probs=24.4
Q ss_pred CchhHHHHHHHHhCCHHHHHHHhcCCC
Q 046453 43 GRPAFESVLQRMKRSPEGRAVLLERPR 69 (225)
Q Consensus 43 ~~~a~~~~~~~m~~~p~g~~ll~erp~ 69 (225)
.-+.+...+++|.+.|..++.++.||.
T Consensus 98 ~~P~l~~~~~~i~~~P~vk~yl~~rp~ 124 (127)
T d2gsqa1 98 DCPKIVALRKRVAECPKIAAYLKKRPV 124 (127)
T ss_dssp TCHHHHHHHHHHHTSHHHHHHHHHSCC
T ss_pred cCcHHHHHHHHHHhCHHHHHHHHHCCC
Confidence 457889999999999999999999985
No 4
>d1m0ua1 a.45.1.1 (A:123-249) Class sigma GST {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=31.98 E-value=16 Score=24.54 Aligned_cols=27 Identities=22% Similarity=0.287 Sum_probs=24.3
Q ss_pred CchhHHHHHHHHhCCHHHHHHHhcCCC
Q 046453 43 GRPAFESVLQRMKRSPEGRAVLLERPR 69 (225)
Q Consensus 43 ~~~a~~~~~~~m~~~p~g~~ll~erp~ 69 (225)
..+.+...++++.+.|..+..++.||.
T Consensus 98 ~~P~L~~~~~rv~~~P~ik~yl~~Rp~ 124 (127)
T d1m0ua1 98 PYPALRGVVDAVNALEPIKAWIEKRPV 124 (127)
T ss_dssp TCHHHHHHHHHHHTSHHHHHHHHHSCC
T ss_pred cChHHHHHHHHHHcCHHHHHHHHHCCC
Confidence 356789999999999999999999995
No 5
>d1okta1 a.45.1.1 (A:86-211) Pf GST {Malarial parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=29.75 E-value=19 Score=24.20 Aligned_cols=26 Identities=12% Similarity=0.181 Sum_probs=23.9
Q ss_pred chhHHHHHHHHhCCHHHHHHHhcCCC
Q 046453 44 RPAFESVLQRMKRSPEGRAVLLERPR 69 (225)
Q Consensus 44 ~~a~~~~~~~m~~~p~g~~ll~erp~ 69 (225)
-+.+...+++|.+.|..++.|+.||.
T Consensus 98 ~P~L~~~~~rv~~~P~ik~yl~~r~~ 123 (126)
T d1okta1 98 FPLLKAHNEFISNLPNIKNYITNRKE 123 (126)
T ss_dssp CHHHHHHHHHHHTSHHHHHHHHHSCC
T ss_pred ChHHHHHHHHHHcCHHHHHHHHhCCC
Confidence 47889999999999999999999996
No 6
>d1gula1 a.45.1.1 (A:81-220) Class alpha GST {Human (Homo sapiens), (a1-1) [TaxId: 9606]}
Probab=15.12 E-value=68 Score=21.38 Aligned_cols=30 Identities=10% Similarity=0.089 Sum_probs=25.1
Q ss_pred CchhHHHHHHHHhCCHHHHHHHhcCCCCCc
Q 046453 43 GRPAFESVLQRMKRSPEGRAVLLERPRVIY 72 (225)
Q Consensus 43 ~~~a~~~~~~~m~~~p~g~~ll~erp~~~~ 72 (225)
.-+.+....++|.+.|..++.++.+++-..
T Consensus 97 ~~P~L~~~~~rv~~~P~ik~yl~~~~~~~~ 126 (140)
T d1gula1 97 AFPFLQEYTVKLSNIPTIKRFLEPGSKKKP 126 (140)
T ss_dssp TCHHHHHHHHHHTTSHHHHHHHSTTSSCCC
T ss_pred HhHHHHHHHHHHHhCHHHHHHHcCCcccCC
Confidence 467889999999999999999987776443
No 7
>d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=13.81 E-value=39 Score=21.15 Aligned_cols=16 Identities=25% Similarity=0.501 Sum_probs=13.5
Q ss_pred hccHHHHHHHcCCCCC
Q 046453 205 HEDLEDLRKKWGIVPA 220 (225)
Q Consensus 205 e~pL~e~R~~lgI~~~ 220 (225)
++..+|+|+.|||+.-
T Consensus 45 gkt~eeiR~~f~I~~D 60 (70)
T d1nexa1 45 GRSPEEIRRTFNIVND 60 (70)
T ss_dssp TCCHHHHHHHHTCCCC
T ss_pred cCCHHHHHHHhCCCCC
Confidence 5688999999999853
No 8
>d1ou8a_ b.136.1.1 (A:) Stringent starvation protein B, SspB {Haemophilus influenzae [TaxId: 727]}
Probab=12.09 E-value=38 Score=23.17 Aligned_cols=16 Identities=25% Similarity=0.451 Sum_probs=14.5
Q ss_pred HHHHHHHhhcCCCCCC
Q 046453 87 GAAYASFMGSRNFSPD 102 (225)
Q Consensus 87 G~~Y~~fl~~~g~~p~ 102 (225)
=||+++|+-+||++|.
T Consensus 9 iRA~y~W~~Dn~~TP~ 24 (106)
T d1ou8a_ 9 LRAYYDWLVDNSFTPY 24 (106)
T ss_dssp HHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHCCCCCe
Confidence 3899999999999996
No 9
>d1v29a_ d.149.1.1 (A:) Cobalt-containing nitrile hydratase {Bacillus smithii [TaxId: 1479]}
Probab=12.08 E-value=85 Score=23.77 Aligned_cols=65 Identities=22% Similarity=0.190 Sum_probs=42.0
Q ss_pred CCCCc-ccCChHHHHHHHHHHHH--HhhcCCCCchhhHHhhhcc-CchhHHHHHHHHhCCHHHHHHHhc
Q 046453 2 IQGAR-VQLNGWQQVAVAVGSAV--GALLDPRRADLIAALGETT-GRPAFESVLQRMKRSPEGRAVLLE 66 (225)
Q Consensus 2 ~~~~~-~~~~~~~~~~~~~~~~~--~~l~dp~~~d~v~~l~e~~-~~~a~~~~~~~m~~~p~g~~ll~e 66 (225)
||.+| -|.|-++....++.+.+ +.|.++...|.+....+.. |...=.++..|=..||++|+.|-+
T Consensus 4 ~ph~~~~~~s~~e~rv~ALe~LLieKGlit~~~id~~ie~~e~~vgP~nGArvVARAW~Dp~FK~rLL~ 72 (203)
T d1v29a_ 4 FPHHHPRPQSFWEARAKALESLLIEKRLLSSDAIERVIKHYEHELGPMNGAKVVAKAWTDPEFKQRLLE 72 (203)
T ss_dssp CGGGSCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTTCCTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCCCCcchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHhccCCccHHHHHHHHhcCHHHHHHHHH
Confidence 55555 23344555556666554 3456666666666666664 434448899999999999986655
No 10
>d1mtyg_ a.23.3.1 (G:) Methane monooxygenase hydrolase, gamma subunit {Methylococcus capsulatus [TaxId: 414]}
Probab=12.07 E-value=38 Score=24.64 Aligned_cols=25 Identities=32% Similarity=0.432 Sum_probs=18.5
Q ss_pred ccCcchhhhhhccHHHHHHHcCCCC
Q 046453 195 LMCVYYEQHFHEDLEDLRKKWGIVP 219 (225)
Q Consensus 195 l~~~~wE~~~e~pL~e~R~~lgI~~ 219 (225)
||-.+=-++...|||++|++=|+..
T Consensus 136 LMeLRn~~Yy~tpLeeLRk~rgV~v 160 (162)
T d1mtyg_ 136 LMELRNLNYYDTPLEELRKQRGVRV 160 (162)
T ss_dssp HHHHHTTTTTCSCHHHHHHHHTCEE
T ss_pred HHHhhCCccccCcHHHHHHHhCCcc
Confidence 3334444678999999999988753
Done!